Your job contains 1 sequence.
>psy10448
MFPGAKDIDLAIQRGHWEHRRYDRDREEEKKEKEEARIYGQMARQILLALFLGTGDRYLQ
TSSPKSPSQNLDFTSFLEVYHPQLLKSYMKKMNNDFTEPPALEEPLDEEDKRMARLNRHN
INDEELEKKYYRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIP
GLKESIEFYNKKKSKGRGKTKTKELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPP
FLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGP
FLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIR
SSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLL
LTGTPLQNNLEELFHLLNFLTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLK
ADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCC
NHPYLFPAAAEEAPVQGGQYEIQALTRAAGKLVLLSKMLKKLKEDGHRYGIKPEWLIANR
VINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDYLDG
EGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDW
NPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMI
YRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQANFTKQELDDILRFGTEELFKEEE
EQPENTEIIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQTDDENDDDDFD
EKNDGDLTGRRSAKKKEMSKQERDRPLPPLLARVGGNIEVLNQLEELLSDMKSDVSRLPA
TLARIPPVAQRLHMSERSILSRLAATSTSTNPSSARESALH
The BLAST search returned 10 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10448
(1001 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0262519 - symbol:Mi-2 species:7227 "Drosophila mel... 1634 6.7e-259 4
UNIPROTKB|F1N3F6 - symbol:CHD4 "Uncharacterized protein" ... 1489 1.1e-239 5
UNIPROTKB|E2RHA0 - symbol:CHD4 "Uncharacterized protein" ... 1489 1.1e-239 5
UNIPROTKB|J9NW81 - symbol:CHD4 "Uncharacterized protein" ... 1489 1.1e-239 5
UNIPROTKB|F1SLR5 - symbol:CHD4 "Uncharacterized protein" ... 1489 1.1e-239 5
UNIPROTKB|F5GWX5 - symbol:CHD4 "Chromodomain-helicase-DNA... 1489 1.1e-239 5
UNIPROTKB|Q14839 - symbol:CHD4 "Chromodomain-helicase-DNA... 1489 1.1e-239 5
MGI|MGI:1344380 - symbol:Chd4 "chromodomain helicase DNA ... 1489 1.1e-239 5
UNIPROTKB|E9PU01 - symbol:Chd4 "Protein Chd4" species:101... 1489 1.1e-239 5
UNIPROTKB|F1LM59 - symbol:Chd4 "Protein Chd4" species:101... 1489 1.1e-239 5
ZFIN|ZDB-GENE-041111-187 - symbol:chd4a "chromodomain hel... 1448 3.2e-238 6
RGD|1582725 - symbol:Chd5 "chromodomain helicase DNA bind... 1452 3.7e-237 5
UNIPROTKB|E2R1M3 - symbol:CHD5 "Uncharacterized protein" ... 1449 6.0e-237 5
UNIPROTKB|E2RTI2 - symbol:CHD3 "Uncharacterized protein" ... 1471 9.3e-237 4
UNIPROTKB|Q12873 - symbol:CHD3 "Chromodomain-helicase-DNA... 1471 9.3e-237 4
UNIPROTKB|F1ST12 - symbol:CHD3 "Uncharacterized protein" ... 1471 9.3e-237 4
UNIPROTKB|Q8TDI0 - symbol:CHD5 "Chromodomain-helicase-DNA... 1447 9.8e-237 5
UNIPROTKB|F1N544 - symbol:CHD3 "Uncharacterized protein" ... 1471 8.2e-236 4
RGD|1311923 - symbol:Chd3 "chromodomain helicase DNA bind... 1462 8.2e-236 4
UNIPROTKB|E9PG89 - symbol:CHD3 "Chromodomain-helicase-DNA... 1471 1.2e-235 4
UNIPROTKB|F1LPP7 - symbol:Chd3 "Protein Chd3" species:101... 1462 1.4e-235 4
UNIPROTKB|F1M7Q0 - symbol:Chd3 "Protein Chd3" species:101... 1462 1.8e-234 4
ZFIN|ZDB-GENE-030131-4532 - symbol:chd4b "chromodomain he... 1443 2.6e-234 5
UNIPROTKB|F1MFF9 - symbol:Bt.62145 "Uncharacterized prote... 1448 2.5e-232 4
UNIPROTKB|F1NH79 - symbol:CHD4 "Uncharacterized protein" ... 1495 5.9e-223 5
UNIPROTKB|F1NH78 - symbol:F1NH78 "Uncharacterized protein... 1449 2.0e-222 5
UNIPROTKB|F1SSZ2 - symbol:CHD5 "Uncharacterized protein" ... 1448 4.1e-222 5
UNIPROTKB|F1RIM3 - symbol:CHD5 "Uncharacterized protein" ... 1448 3.7e-219 4
WB|WBGene00000482 - symbol:chd-3 species:6239 "Caenorhabd... 1291 2.5e-209 5
UNIPROTKB|Q22516 - symbol:chd-3 "Chromodomain-helicase-DN... 1291 2.5e-209 5
UNIPROTKB|K7EMY3 - symbol:CHD5 "Chromodomain-helicase-DNA... 1294 6.2e-203 4
WB|WBGene00002637 - symbol:let-418 species:6239 "Caenorha... 1280 8.2e-202 5
UNIPROTKB|G5EBZ4 - symbol:let-418 "Protein let-418" speci... 1280 8.2e-202 5
UNIPROTKB|J9NRN3 - symbol:CHD5 "Uncharacterized protein" ... 1449 3.0e-192 2
UNIPROTKB|F2Z2R5 - symbol:CHD5 "Chromodomain-helicase-DNA... 1447 1.3e-191 2
FB|FBgn0023395 - symbol:Chd3 "Chd3" species:7227 "Drosoph... 1209 3.8e-191 4
TAIR|locus:2040184 - symbol:PKL "PICKLE" species:3702 "Ar... 776 2.6e-124 4
ZFIN|ZDB-GENE-070912-179 - symbol:chd7 "chromodomain heli... 681 8.3e-112 4
DICTYBASE|DDB_G0284171 - symbol:DDB_G0284171 "CHR group p... 778 2.2e-111 3
UNIPROTKB|E1BS47 - symbol:CHD7 "Chromodomain-helicase-DNA... 710 1.6e-108 4
UNIPROTKB|E1C1A9 - symbol:CHD2 "Uncharacterized protein" ... 724 2.5e-108 4
UNIPROTKB|I3LRQ2 - symbol:CHD2 "Uncharacterized protein" ... 709 1.3e-107 3
UNIPROTKB|D4AD08 - symbol:Chd2 "Chromodomain helicase DNA... 719 1.4e-107 4
UNIPROTKB|J9NSS6 - symbol:CHD2 "Uncharacterized protein" ... 710 1.5e-107 4
FB|FBgn0250786 - symbol:Chd1 "Chromodomain-helicase-DNA-b... 713 2.0e-107 3
UNIPROTKB|I3LQZ8 - symbol:CHD2 "Uncharacterized protein" ... 703 2.9e-107 4
UNIPROTKB|O14647 - symbol:CHD2 "Chromodomain-helicase-DNA... 714 4.8e-107 4
UNIPROTKB|J9NX79 - symbol:CHD2 "Uncharacterized protein" ... 710 1.3e-106 4
UNIPROTKB|F1NSG3 - symbol:CHD7 "Chromodomain-helicase-DNA... 710 2.4e-106 4
UNIPROTKB|E2R5Z7 - symbol:CHD2 "Uncharacterized protein" ... 710 2.7e-106 4
UNIPROTKB|F1SA77 - symbol:CHD2 "Uncharacterized protein" ... 709 2.7e-106 4
UNIPROTKB|J9PA90 - symbol:CHD2 "Uncharacterized protein" ... 710 2.8e-106 4
UNIPROTKB|F1NVT7 - symbol:CHD6 "Uncharacterized protein" ... 700 5.4e-106 3
UNIPROTKB|G3MXX3 - symbol:CHD2 "Uncharacterized protein" ... 705 8.5e-106 4
UNIPROTKB|E1BPM4 - symbol:CHD7 "Uncharacterized protein" ... 709 1.0e-105 4
UNIPROTKB|Q06A37 - symbol:CHD7 "Chromodomain-helicase-DNA... 710 1.5e-105 4
UNIPROTKB|Q9P2D1 - symbol:CHD7 "Chromodomain-helicase-DNA... 712 1.8e-105 4
UNIPROTKB|F1PWD8 - symbol:CHD7 "Uncharacterized protein" ... 714 2.3e-105 4
UNIPROTKB|H3BTW3 - symbol:CHD9 "Chromodomain-helicase-DNA... 682 2.9e-105 3
UNIPROTKB|F1N734 - symbol:CHD6 "Uncharacterized protein" ... 707 3.3e-105 3
UNIPROTKB|F1PTH3 - symbol:CHD6 "Uncharacterized protein" ... 705 6.8e-105 3
UNIPROTKB|J9P0F6 - symbol:CHD6 "Uncharacterized protein" ... 705 6.8e-105 3
UNIPROTKB|Q8TD26 - symbol:CHD6 "Chromodomain-helicase-DNA... 705 1.1e-104 3
ZFIN|ZDB-GENE-050419-256 - symbol:chd2 "chromodomain heli... 701 1.2e-104 3
UNIPROTKB|F1NLW6 - symbol:CHD6 "Uncharacterized protein" ... 700 2.1e-104 3
UNIPROTKB|F1NLV5 - symbol:CHD6 "Uncharacterized protein" ... 700 2.1e-104 3
MGI|MGI:2444748 - symbol:Chd7 "chromodomain helicase DNA ... 712 5.6e-104 3
RGD|1306794 - symbol:Chd1 "chromodomain helicase DNA bind... 679 8.1e-104 3
RGD|1311921 - symbol:Chd7 "chromodomain helicase DNA bind... 710 1.5e-103 3
TAIR|locus:2041644 - symbol:CHR5 "chromatin remodeling 5"... 666 2.3e-103 3
UNIPROTKB|B6ZLK2 - symbol:CHD1 "Chromodomain-helicase-DNA... 678 1.2e-102 4
RGD|1594200 - symbol:LOC680231 "similar to chromodomain h... 684 1.2e-102 3
CGD|CAL0001390 - symbol:orf19.3035 species:5476 "Candida ... 667 1.3e-102 3
MGI|MGI:1924001 - symbol:Chd9 "chromodomain helicase DNA ... 683 1.5e-102 3
UNIPROTKB|Q3L8U1 - symbol:CHD9 "Chromodomain-helicase-DNA... 682 4.1e-102 3
UNIPROTKB|E2RDK8 - symbol:CHD9 "Uncharacterized protein" ... 681 5.2e-102 3
UNIPROTKB|E1BDZ3 - symbol:CHD9 "Uncharacterized protein" ... 680 6.6e-102 3
UNIPROTKB|E1BS48 - symbol:CHD9 "Uncharacterized protein" ... 683 2.3e-101 3
UNIPROTKB|O14646 - symbol:CHD1 "Chromodomain-helicase-DNA... 679 3.4e-101 3
MGI|MGI:88393 - symbol:Chd1 "chromodomain helicase DNA bi... 679 3.4e-101 3
ZFIN|ZDB-GENE-030131-497 - symbol:chd9 "chromodomain heli... 668 3.7e-101 4
UNIPROTKB|F1RT88 - symbol:CHD7 "Uncharacterized protein" ... 710 3.9e-101 3
FB|FBgn0086902 - symbol:kis "kismet" species:7227 "Drosop... 664 5.2e-101 4
UNIPROTKB|B5DE69 - symbol:chd8 "Chromodomain-helicase-DNA... 676 8.5e-101 3
UNIPROTKB|E2QUI5 - symbol:CHD1 "Uncharacterized protein" ... 673 1.5e-100 3
UNIPROTKB|J9P6Y8 - symbol:CHD1 "Uncharacterized protein" ... 673 1.9e-100 3
UNIPROTKB|F1MGF2 - symbol:CHD1 "Uncharacterized protein" ... 679 2.6e-100 3
UNIPROTKB|F1MLB2 - symbol:CHD8 "Uncharacterized protein" ... 673 9.7e-100 3
UNIPROTKB|F1S8J5 - symbol:CHD8 "Uncharacterized protein" ... 673 1.0e-99 3
UNIPROTKB|E2QUS7 - symbol:CHD8 "Uncharacterized protein" ... 673 1.1e-99 3
UNIPROTKB|E2QUR1 - symbol:CHD8 "Uncharacterized protein" ... 667 2.1e-99 3
UNIPROTKB|F1RN66 - symbol:CHD1 "Uncharacterized protein" ... 679 2.2e-99 3
UNIPROTKB|I3L6N4 - symbol:CHD1 "Uncharacterized protein" ... 679 2.2e-99 3
UNIPROTKB|I3LIS2 - symbol:CHD1 "Uncharacterized protein" ... 679 2.2e-99 3
RGD|620696 - symbol:Chd8 "chromodomain helicase DNA bindi... 669 3.5e-99 3
MGI|MGI:1915022 - symbol:Chd8 "chromodomain helicase DNA ... 669 3.6e-99 3
UNIPROTKB|Q9HCK8 - symbol:CHD8 "Chromodomain-helicase-DNA... 667 4.5e-99 3
SGD|S000000966 - symbol:CHD1 "Chromatin remodeler that re... 650 6.7e-99 3
POMBASE|SPAC1783.05 - symbol:hrp1 "ATP-dependent DNA heli... 632 9.9e-99 3
POMBASE|SPAC3G6.01 - symbol:hrp3 "ATP-dependent DNA helic... 644 4.5e-98 3
WARNING: Descriptions of 440 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0262519 [details] [associations]
symbol:Mi-2 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=IDA;NAS] [GO:0005634
"nucleus" evidence=ISS;IDA;NAS] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0016581 "NuRD complex" evidence=ISS;TAS]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS;IDA] [GO:0003678 "DNA
helicase activity" evidence=ISS] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0031491 "nucleosome binding"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0070615
"nucleosome-dependent ATPase activity" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 EMBL:AE014296 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0000122
GO:GO:0048813 GO:GO:0007517 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005700 GO:GO:0042766 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
EMBL:AF119716 EMBL:AY113368 RefSeq:NP_001163476.1
RefSeq:NP_649154.2 UniGene:Dm.28317 ProteinModelPortal:O97159
SMR:O97159 DIP:DIP-22862N IntAct:O97159 MINT:MINT-864813
STRING:O97159 PaxDb:O97159 EnsemblMetazoa:FBtr0074919
EnsemblMetazoa:FBtr0302046 GeneID:40170 KEGG:dme:Dmel_CG8103
CTD:40170 FlyBase:FBgn0262519 InParanoid:O97159 OrthoDB:EOG4T76J4
ChiTaRS:Mi-2 GenomeRNAi:40170 NextBio:817384 Bgee:O97159
GermOnline:CG8103 Uniprot:O97159
Length = 1982
Score = 1634 (580.3 bits), Expect = 6.7e-259, Sum P(4) = 6.7e-259
Identities = 310/510 (60%), Positives = 384/510 (75%)
Query: 77 LEVYHPQLLKSYMKKMN-NDFTXXXXXXXXXXXXXKRMARLN-----RHNINDEELEKKY 130
L+V+HP +++S+ +K + + KR+ R + N + E LE+++
Sbjct: 543 LDVHHPLMIRSFQRKYDMEEPPKFEESLDEADTRYKRIQRHKDKVGMKANDDAEVLEERF 602
Query: 131 YRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYN 190
Y+ G+KPEWLI RVIN +T RDGST+YLVKWR+LPYDK+TWE+E +DI GL+++I++Y
Sbjct: 603 YKNGVKPEWLIVQRVINHRTARDGSTMYLVKWRELPYDKSTWEEEGDDIQGLRQAIDYYQ 662
Query: 191 XXXXXXXXXXXXXELQEDEDGASGS--------KP-RRYTPPPEKPTTDLRKKYEKQPPF 241
++ + G +P + YTPPPEKPTTDL+KKYE QP F
Sbjct: 663 DLRAVCTSETTQSRSKKSKKGRKSKLKVEDDEDRPVKHYTPPPEKPTTDLKKKYEDQPAF 722
Query: 242 LDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPF 301
L+ TGMQLH YQ+EGINWLRYSWGQ IDTILADEMGLGKTIQT+TFLYSL+KEGHC+GPF
Sbjct: 723 LEGTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLYKEGHCRGPF 782
Query: 302 LVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRS 361
LV+ PLST++NWEREFE WAPDFY +TY+GDKD R V+R++++S+E+ A RG K R+R+
Sbjct: 783 LVAVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIRENELSFEEGAIRGSKVSRLRT 842
Query: 362 STVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLL 421
+ KF+VLLTSYELI+ D A LGSI+WAVLVVDEAHRLKSNQSKFF+ L+ Y+I KLLL
Sbjct: 843 TQYKFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRLKSNQSKFFRILNSYTIAYKLLL 902
Query: 422 TGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKA 481
TGTP + +KFNDL +FQ EFAD+SKEEQVKRLH++LGPHMLRRLK
Sbjct: 903 TGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGEFADVSKEEQVKRLHEMLGPHMLRRLKT 962
Query: 482 DVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCN 541
DVLKNMPSKSEFIVRVELS MQKK+YK+ILT+N+EALN K GG SL+NIMMDLKKCCN
Sbjct: 963 DVLKNMPSKSEFIVRVELSAMQKKFYKFILTKNYEALNSKSGGGSCSLINIMMDLKKCCN 1022
Query: 542 HPYLFPAAAEEAPVQ-GGQYEIQALTRAAG 570
HPYLFP+AAEEA GG YEI +LT+AAG
Sbjct: 1023 HPYLFPSAAEEATTAAGGLYEINSLTKAAG 1052
Score = 609 (219.4 bits), Expect = 6.7e-259, Sum P(4) = 6.7e-259
Identities = 138/258 (53%), Positives = 162/258 (62%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MTKMLDILED+L+GE YKYERIDG ITG++RQE+IDRFNAPGA QFVFLLSTR+GGL
Sbjct: 1074 FSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQEAIDRFNAPGAQQFVFLLSTRAGGL 1133
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYI--NLATADTV------IIYDS 755
GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ NK + T ++V +
Sbjct: 1134 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRK 1193
Query: 756 DWNPHNDIQAF--SRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKR--KMMLTHLVVRPG 811
H ++ + +Q I RF T + +E + A + L+ R
Sbjct: 1194 MMLTHLVVRPGMGGKGANFTKQELDDILRFGTEDLFKEDDKEEAIHYDDKAVAELLDRTN 1253
Query: 812 MGGKQANFTKQELDDILRFGTXXXXXXXXXXXXXXXIIKQEAENQDPAYWVKLLRHHYEQ 871
G ++ E + F IIKQ+AEN DPAYWVKLLRHHYEQ
Sbjct: 1254 RGIEEKESWANEY--LSSFKVASYATKEEEEEEETEIIKQDAENSDPAYWVKLLRHHYEQ 1311
Query: 872 HQEDVSRTLGKGKRVRKQ 889
HQEDV R+LGKGKRVRKQ
Sbjct: 1312 HQEDVGRSLGKGKRVRKQ 1329
Score = 236 (88.1 bits), Expect = 9.0e-99, Sum P(5) = 9.0e-99
Identities = 38/59 (64%), Positives = 52/59 (88%)
Query: 587 HRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFY 645
++ G+KPEWLI RVIN +T RDGST+YLVKWR+LPYDK+TWE+E +DI GL+++I++Y
Sbjct: 603 YKNGVKPEWLIVQRVINHRTARDGSTMYLVKWRELPYDKSTWEEEGDDIQGLRQAIDYY 661
Score = 202 (76.2 bits), Expect = 6.7e-259, Sum P(4) = 6.7e-259
Identities = 43/45 (95%), Positives = 44/45 (97%)
Query: 939 EVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRL 983
+VLNQLEELLSDMKSDVSRLPATLARIPPVAQRL MSERSILSRL
Sbjct: 1882 KVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLQMSERSILSRL 1926
Score = 101 (40.6 bits), Expect = 6.7e-259, Sum P(4) = 6.7e-259
Identities = 22/34 (64%), Positives = 26/34 (76%)
Query: 910 RRSAKKKEMSKQER--DRPLPPLLARVGGNIEVL 941
+ A++K + ER DRPLPPLLARVGGNIEVL
Sbjct: 1376 QNGAERKAKRRLERRDDRPLPPLLARVGGNIEVL 1409
Score = 52 (23.4 bits), Expect = 2.0e-79, Sum P(5) = 2.0e-79
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 614 YLVKWRDLPYDKATWEDENE-DI--PGLKESIEF-YNMTKMLDILEDYLDGEGYKYERI 668
Y +KW ++ Y W E + D+ P + S + Y+M + E+ LD +Y+RI
Sbjct: 523 YFIKWHNMSYWHCEWVPEVQLDVHHPLMIRSFQRKYDMEEPPKF-EESLDEADTRYKRI 580
Score = 46 (21.3 bits), Expect = 3.5e-233, Sum P(3) = 3.5e-233
Identities = 15/59 (25%), Positives = 28/59 (47%)
Query: 910 RRSAKKKEMSK-QERDRPLPPLLARVGGNIEVLNQLEELLSDMKSDVSRLPATLARIPP 967
+ SA+K E+ + QE + P G+++ N +EE D K + + +A+ P
Sbjct: 1584 KTSAEKSEVKQEQEAEEDKKP------GDVKQENPVEEAAGDTKPSDAEVKTEVAKTEP 1636
Score = 42 (19.8 bits), Expect = 9.0e-99, Sum P(5) = 9.0e-99
Identities = 6/18 (33%), Positives = 9/18 (50%)
Query: 158 YLVKWRDLPYDKATWEDE 175
Y +KW ++ Y W E
Sbjct: 523 YFIKWHNMSYWHCEWVPE 540
Score = 40 (19.1 bits), Expect = 1.5e-98, Sum P(5) = 1.5e-98
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 332 DKDCRIVLRDHDISWEDTANRGGK 355
++D V D ++ + T+ RG K
Sbjct: 80 EEDSDFVQHDEEVEYPSTSKRGRK 103
Score = 38 (18.4 bits), Expect = 2.9e-252, Sum P(4) = 2.9e-252
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 914 KKKEMSKQERDRPLPP 929
++KE K + +P+PP
Sbjct: 1652 EEKEKEKVDDKKPIPP 1667
Score = 37 (18.1 bits), Expect = 7.4e-78, Sum P(5) = 7.4e-78
Identities = 14/55 (25%), Positives = 20/55 (36%)
Query: 605 KTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDYLD 659
K R + +K + L K DE +D G E +ML +D D
Sbjct: 261 KGRRPSGKVPTLKIKLLGKRKRDSSDEEQDASGASERDSDLEFERMLQKSDDSAD 315
>UNIPROTKB|F1N3F6 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:DAAA02014463 IPI:IPI00877578
Ensembl:ENSBTAT00000019612 ArrayExpress:F1N3F6 Uniprot:F1N3F6
Length = 1934
Score = 1489 (529.2 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 299/523 (57%), Positives = 368/523 (70%)
Query: 77 LEVYHPQLLKSYMKKMNNDFTXXXXXXXXXXXXXKRMARLNRHNINDEELEKKYYRYGIK 136
LE++ + ++Y +K ND R R N+ + E+E+++YRYGIK
Sbjct: 585 LELHCQVMFRNYQRK--NDMDEPPSGDFGGDEEKSRK-RKNK-DPKFAEMEERFYRYGIK 640
Query: 137 PEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPG---LKESIEFYNXXX 193
PEW++ +R++N + G YL+KWRDLPYD+A+WE E+ +I K+S ++N
Sbjct: 641 PEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDVEIQDYDLFKQS--YWNHR- 697
Query: 194 XXXXXXXXXXELQEDEDGASGSKP-----RRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQ 248
EL E+G G K R+ PPE PT D KYE+QP +LD TG
Sbjct: 698 ----------ELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDATGGT 747
Query: 249 LHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLS 308
LH YQ+EG+NWLR+SW Q DTILADEMGLGKT+QT FLYSL+KEGH KGPFLVSAPLS
Sbjct: 748 LHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLS 807
Query: 309 TIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPC-RIRS-STVKF 366
TIINWEREFE WAPD YVVTYVGDKD R ++R+++ S+ED A RGGK R++ ++VKF
Sbjct: 808 TIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASVKF 867
Query: 367 HVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPX 426
HVLLTSYELIT D+A+LGSI+WA L+VDEAHRLK+NQSKFF+ L+GYS+Q+KLLLTGTP
Sbjct: 868 HVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPL 927
Query: 427 XXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKN 486
TPE+F++L F EFADI+KE+Q+K+LHD+LGPHMLRRLKADV KN
Sbjct: 928 QNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKN 987
Query: 487 MPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLF 546
MPSK+E IVRVELSPMQKKYYKYILTRNFEALN +GGG QVSLLN++MDLKKCCNHPYLF
Sbjct: 988 MPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLF 1047
Query: 547 PAAAEEAP-VQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
P AA EAP + G Y+ AL RA+G E GHR
Sbjct: 1048 PVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHR 1090
Score = 442 (160.7 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 83/97 (85%), Positives = 89/97 (91%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MTKMLD+LED+L+ EGYKYERIDG ITG+MRQE+IDRFNAPGA QF FLLSTR+GGL
Sbjct: 1094 FSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGL 1153
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ K
Sbjct: 1154 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKK 1190
Score = 410 (149.4 bits), Expect = 2.6e-236, Sum P(5) = 2.6e-236
Identities = 78/91 (85%), Positives = 84/91 (92%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ KVMIYRFVTR SVEER+TQVAK+KM
Sbjct: 1155 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKM 1214
Query: 802 MLTHLVVRPGMGGKQANFTKQELDDILRFGT 832
MLTHLVVRPG+G K + +KQELDDIL+FGT
Sbjct: 1215 MLTHLVVRPGLGSKTGSMSKQELDDILKFGT 1245
Score = 178 (67.7 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 37/45 (82%), Positives = 42/45 (93%)
Query: 939 EVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRL 983
+VL QLEELLSDMK+DV+RLPAT+ARIPPVA RL MSER+ILSRL
Sbjct: 1874 KVLKQLEELLSDMKADVTRLPATIARIPPVAVRLQMSERNILSRL 1918
Score = 168 (64.2 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 32/42 (76%), Positives = 36/42 (85%)
Query: 848 IIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQ 889
IIKQE E+ DP YW KLLRHHYEQ QED++R LGKGKR+RKQ
Sbjct: 1324 IIKQE-ESVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQ 1364
Score = 166 (63.5 bits), Expect = 8.0e-82, Sum P(6) = 8.0e-82
Identities = 26/49 (53%), Positives = 38/49 (77%)
Query: 587 HRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDI 635
+RYGIKPEW++ +R++N + G YL+KWRDLPYD+A+WE E+ +I
Sbjct: 635 YRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDVEI 683
Score = 97 (39.2 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 20/32 (62%), Positives = 26/32 (81%)
Query: 910 RRSAKKKEMSKQERDRPLPPLLARVGGNIEVL 941
RR ++K + ++D+PLPPLLARVGGNIEVL
Sbjct: 1407 RRPSRKG--LRNDKDKPLPPLLARVGGNIEVL 1436
Score = 51 (23.0 bits), Expect = 8.0e-82, Sum P(6) = 8.0e-82
Identities = 33/130 (25%), Positives = 57/130 (43%)
Query: 205 LQEDEDGAS---GSKPRRYT-PPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWL 260
L+ D +G+ G K ++ P EK + RK+ E++ DD+ + QL L
Sbjct: 121 LRSDSEGSDYTPGKKKKKKLGPKKEKKSKSKRKEEEEEDEDDDDSKEPKSSAQL-----L 175
Query: 261 RYSWG-QNIDTILADEMGLGKTIQTITFLYSLFKEG-----HCKGPFLVSAPLSTIIN-- 312
WG ++ID + ++E +T+T Y F + K P + + + ++
Sbjct: 176 E-DWGMEDIDHVFSEE-----DYRTLTN-YKAFSQFVRPLIAAKNPKIAVSKMMMVLGAK 228
Query: 313 WEREFETWAP 322
W REF T P
Sbjct: 229 W-REFSTNNP 237
Score = 46 (21.3 bits), Expect = 5.0e-198, Sum P(5) = 5.0e-198
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 670 GNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSD 719
G+ TGSM ++ +D G + +F GG G N D+ +I+ D
Sbjct: 1226 GSKTGSMSKQELDDILKFGTEE-LFKDEATDGG-GDNKEGEDSSVIHYDD 1273
Score = 41 (19.5 bits), Expect = 8.7e-81, Sum P(6) = 8.7e-81
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 158 YLVKWRDLPYDKATWEDE 175
+ VKW+ + Y +W E
Sbjct: 565 FFVKWQGMSYWHCSWVSE 582
Score = 41 (19.5 bits), Expect = 8.0e-69, Sum P(6) = 8.0e-69
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 614 YLVKWRDLPYDKATWEDE 631
+ VKW+ + Y +W E
Sbjct: 565 FFVKWQGMSYWHCSWVSE 582
Score = 39 (18.8 bits), Expect = 6.8e-216, Sum P(4) = 6.8e-216
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 926 PLPPLLARVGGNIEVLNQLEELLSDMKSDVSRLPATLA 963
P PP A G +E N EE ++ + +V +P A
Sbjct: 1578 PAPP--AEDGIKVEENNLKEEESAEAEKEVKSVPPEAA 1613
Score = 38 (18.4 bits), Expect = 9.6e-07, Sum P(3) = 9.6e-07
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 204 ELQEDEDGASGSKPRRYTPPPEKPT 228
EL E E+ S+P +P P+ PT
Sbjct: 1542 ELAEVEENKKMSQPG--SPSPKTPT 1564
>UNIPROTKB|E2RHA0 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 EMBL:AAEX03015287 RefSeq:XP_867754.2
Ensembl:ENSCAFT00000023774 GeneID:477714 KEGG:cfa:477714
Uniprot:E2RHA0
Length = 1912
Score = 1489 (529.2 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 299/523 (57%), Positives = 368/523 (70%)
Query: 77 LEVYHPQLLKSYMKKMNNDFTXXXXXXXXXXXXXKRMARLNRHNINDEELEKKYYRYGIK 136
LE++ + ++Y +K ND R R N+ + E+E+++YRYGIK
Sbjct: 563 LELHCQVMFRNYQRK--NDMDEPPSGDFGGDEEKSRK-RKNK-DPKFAEMEERFYRYGIK 618
Query: 137 PEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPG---LKESIEFYNXXX 193
PEW++ +R++N + G YL+KWRDLPYD+A+WE E+ +I K+S ++N
Sbjct: 619 PEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDVEIQDYDLFKQS--YWNHR- 675
Query: 194 XXXXXXXXXXELQEDEDGASGSKP-----RRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQ 248
EL E+G G K R+ PPE PT D KYE+QP +LD TG
Sbjct: 676 ----------ELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDATGGT 725
Query: 249 LHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLS 308
LH YQ+EG+NWLR+SW Q DTILADEMGLGKT+QT FLYSL+KEGH KGPFLVSAPLS
Sbjct: 726 LHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLS 785
Query: 309 TIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPC-RIRS-STVKF 366
TIINWEREFE WAPD YVVTYVGDKD R ++R+++ S+ED A RGGK R++ ++VKF
Sbjct: 786 TIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASVKF 845
Query: 367 HVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPX 426
HVLLTSYELIT D+A+LGSI+WA L+VDEAHRLK+NQSKFF+ L+GYS+Q+KLLLTGTP
Sbjct: 846 HVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPL 905
Query: 427 XXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKN 486
TPE+F++L F EFADI+KE+Q+K+LHD+LGPHMLRRLKADV KN
Sbjct: 906 QNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKN 965
Query: 487 MPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLF 546
MPSK+E IVRVELSPMQKKYYKYILTRNFEALN +GGG QVSLLN++MDLKKCCNHPYLF
Sbjct: 966 MPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLF 1025
Query: 547 PAAAEEAP-VQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
P AA EAP + G Y+ AL RA+G E GHR
Sbjct: 1026 PVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHR 1068
Score = 442 (160.7 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 83/97 (85%), Positives = 89/97 (91%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MTKMLD+LED+L+ EGYKYERIDG ITG+MRQE+IDRFNAPGA QF FLLSTR+GGL
Sbjct: 1072 FSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGL 1131
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ K
Sbjct: 1132 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKK 1168
Score = 410 (149.4 bits), Expect = 2.6e-236, Sum P(5) = 2.6e-236
Identities = 78/91 (85%), Positives = 84/91 (92%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ KVMIYRFVTR SVEER+TQVAK+KM
Sbjct: 1133 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKM 1192
Query: 802 MLTHLVVRPGMGGKQANFTKQELDDILRFGT 832
MLTHLVVRPG+G K + +KQELDDIL+FGT
Sbjct: 1193 MLTHLVVRPGLGSKTGSMSKQELDDILKFGT 1223
Score = 178 (67.7 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 37/45 (82%), Positives = 42/45 (93%)
Query: 939 EVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRL 983
+VL QLEELLSDMK+DV+RLPAT+ARIPPVA RL MSER+ILSRL
Sbjct: 1852 KVLKQLEELLSDMKADVTRLPATIARIPPVAVRLQMSERNILSRL 1896
Score = 168 (64.2 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 32/42 (76%), Positives = 36/42 (85%)
Query: 848 IIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQ 889
IIKQE E+ DP YW KLLRHHYEQ QED++R LGKGKR+RKQ
Sbjct: 1302 IIKQE-ESVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQ 1342
Score = 166 (63.5 bits), Expect = 7.2e-82, Sum P(6) = 7.2e-82
Identities = 26/49 (53%), Positives = 38/49 (77%)
Query: 587 HRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDI 635
+RYGIKPEW++ +R++N + G YL+KWRDLPYD+A+WE E+ +I
Sbjct: 613 YRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDVEI 661
Score = 97 (39.2 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 20/32 (62%), Positives = 26/32 (81%)
Query: 910 RRSAKKKEMSKQERDRPLPPLLARVGGNIEVL 941
RR ++K + ++D+PLPPLLARVGGNIEVL
Sbjct: 1385 RRPSRKG--LRNDKDKPLPPLLARVGGNIEVL 1414
Score = 51 (23.0 bits), Expect = 7.2e-82, Sum P(6) = 7.2e-82
Identities = 33/130 (25%), Positives = 57/130 (43%)
Query: 205 LQEDEDGAS---GSKPRRYT-PPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWL 260
L+ D +G+ G K ++ P EK + RK+ E++ DD+ + QL L
Sbjct: 101 LRSDSEGSDYTPGKKKKKKLGPKKEKKSKSKRKEEEEEDDDDDDSKEPKSSAQL-----L 155
Query: 261 RYSWG-QNIDTILADEMGLGKTIQTITFLYSLFKEG-----HCKGPFLVSAPLSTIIN-- 312
WG ++ID + ++E +T+T Y F + K P + + + ++
Sbjct: 156 E-DWGMEDIDHVFSEE-----DYRTLTN-YKAFSQFVRPLIAAKNPKIAVSKMMMVLGAK 208
Query: 313 WEREFETWAP 322
W REF T P
Sbjct: 209 W-REFSTNNP 217
Score = 46 (21.3 bits), Expect = 5.0e-198, Sum P(5) = 5.0e-198
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 670 GNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSD 719
G+ TGSM ++ +D G + +F GG G N D+ +I+ D
Sbjct: 1204 GSKTGSMSKQELDDILKFGTEE-LFKDEATDGG-GDNKEGEDSSVIHYDD 1251
Score = 41 (19.5 bits), Expect = 7.9e-81, Sum P(6) = 7.9e-81
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 158 YLVKWRDLPYDKATWEDE 175
+ VKW+ + Y +W E
Sbjct: 543 FFVKWQGMSYWHCSWVSE 560
Score = 41 (19.5 bits), Expect = 7.3e-69, Sum P(6) = 7.3e-69
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 614 YLVKWRDLPYDKATWEDE 631
+ VKW+ + Y +W E
Sbjct: 543 FFVKWQGMSYWHCSWVSE 560
Score = 38 (18.4 bits), Expect = 9.3e-07, Sum P(3) = 9.3e-07
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 204 ELQEDEDGASGSKPRRYTPPPEKPT 228
EL E E+ S+P +P P+ PT
Sbjct: 1520 ELAEVEENKKMSQPG--SPSPKTPT 1542
Score = 37 (18.1 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 12/52 (23%), Positives = 21/52 (40%)
Query: 204 ELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLE 255
E++E++ + P TP P P PP D G+++ L+
Sbjct: 1523 EVEENKKMSQPGSPSPKTPTPSTPGDTQPNTPAPAPPAED--GIKIEENSLK 1572
>UNIPROTKB|J9NW81 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:AAEX03015287 Ensembl:ENSCAFT00000048002
Uniprot:J9NW81
Length = 1932
Score = 1489 (529.2 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 299/523 (57%), Positives = 368/523 (70%)
Query: 77 LEVYHPQLLKSYMKKMNNDFTXXXXXXXXXXXXXKRMARLNRHNINDEELEKKYYRYGIK 136
LE++ + ++Y +K ND R R N+ + E+E+++YRYGIK
Sbjct: 583 LELHCQVMFRNYQRK--NDMDEPPSGDFGGDEEKSRK-RKNK-DPKFAEMEERFYRYGIK 638
Query: 137 PEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPG---LKESIEFYNXXX 193
PEW++ +R++N + G YL+KWRDLPYD+A+WE E+ +I K+S ++N
Sbjct: 639 PEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDVEIQDYDLFKQS--YWNHR- 695
Query: 194 XXXXXXXXXXELQEDEDGASGSKP-----RRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQ 248
EL E+G G K R+ PPE PT D KYE+QP +LD TG
Sbjct: 696 ----------ELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDATGGT 745
Query: 249 LHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLS 308
LH YQ+EG+NWLR+SW Q DTILADEMGLGKT+QT FLYSL+KEGH KGPFLVSAPLS
Sbjct: 746 LHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLS 805
Query: 309 TIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPC-RIRS-STVKF 366
TIINWEREFE WAPD YVVTYVGDKD R ++R+++ S+ED A RGGK R++ ++VKF
Sbjct: 806 TIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASVKF 865
Query: 367 HVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPX 426
HVLLTSYELIT D+A+LGSI+WA L+VDEAHRLK+NQSKFF+ L+GYS+Q+KLLLTGTP
Sbjct: 866 HVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPL 925
Query: 427 XXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKN 486
TPE+F++L F EFADI+KE+Q+K+LHD+LGPHMLRRLKADV KN
Sbjct: 926 QNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKN 985
Query: 487 MPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLF 546
MPSK+E IVRVELSPMQKKYYKYILTRNFEALN +GGG QVSLLN++MDLKKCCNHPYLF
Sbjct: 986 MPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLF 1045
Query: 547 PAAAEEAP-VQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
P AA EAP + G Y+ AL RA+G E GHR
Sbjct: 1046 PVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHR 1088
Score = 442 (160.7 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 83/97 (85%), Positives = 89/97 (91%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MTKMLD+LED+L+ EGYKYERIDG ITG+MRQE+IDRFNAPGA QF FLLSTR+GGL
Sbjct: 1092 FSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGL 1151
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ K
Sbjct: 1152 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKK 1188
Score = 410 (149.4 bits), Expect = 2.6e-236, Sum P(5) = 2.6e-236
Identities = 78/91 (85%), Positives = 84/91 (92%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ KVMIYRFVTR SVEER+TQVAK+KM
Sbjct: 1153 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKM 1212
Query: 802 MLTHLVVRPGMGGKQANFTKQELDDILRFGT 832
MLTHLVVRPG+G K + +KQELDDIL+FGT
Sbjct: 1213 MLTHLVVRPGLGSKTGSMSKQELDDILKFGT 1243
Score = 178 (67.7 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 37/45 (82%), Positives = 42/45 (93%)
Query: 939 EVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRL 983
+VL QLEELLSDMK+DV+RLPAT+ARIPPVA RL MSER+ILSRL
Sbjct: 1872 KVLKQLEELLSDMKADVTRLPATIARIPPVAVRLQMSERNILSRL 1916
Score = 168 (64.2 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 32/42 (76%), Positives = 36/42 (85%)
Query: 848 IIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQ 889
IIKQE E+ DP YW KLLRHHYEQ QED++R LGKGKR+RKQ
Sbjct: 1322 IIKQE-ESVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQ 1362
Score = 166 (63.5 bits), Expect = 7.9e-82, Sum P(6) = 7.9e-82
Identities = 26/49 (53%), Positives = 38/49 (77%)
Query: 587 HRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDI 635
+RYGIKPEW++ +R++N + G YL+KWRDLPYD+A+WE E+ +I
Sbjct: 633 YRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDVEI 681
Score = 97 (39.2 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 20/32 (62%), Positives = 26/32 (81%)
Query: 910 RRSAKKKEMSKQERDRPLPPLLARVGGNIEVL 941
RR ++K + ++D+PLPPLLARVGGNIEVL
Sbjct: 1405 RRPSRKG--LRNDKDKPLPPLLARVGGNIEVL 1434
Score = 51 (23.0 bits), Expect = 7.9e-82, Sum P(6) = 7.9e-82
Identities = 33/130 (25%), Positives = 57/130 (43%)
Query: 205 LQEDEDGAS---GSKPRRYT-PPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWL 260
L+ D +G+ G K ++ P EK + RK+ E++ DD+ + QL L
Sbjct: 121 LRSDSEGSDYTPGKKKKKKLGPKKEKKSKSKRKEEEEEDDDDDDSKEPKSSAQL-----L 175
Query: 261 RYSWG-QNIDTILADEMGLGKTIQTITFLYSLFKEG-----HCKGPFLVSAPLSTIIN-- 312
WG ++ID + ++E +T+T Y F + K P + + + ++
Sbjct: 176 E-DWGMEDIDHVFSEE-----DYRTLTN-YKAFSQFVRPLIAAKNPKIAVSKMMMVLGAK 228
Query: 313 WEREFETWAP 322
W REF T P
Sbjct: 229 W-REFSTNNP 237
Score = 46 (21.3 bits), Expect = 5.0e-198, Sum P(5) = 5.0e-198
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 670 GNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSD 719
G+ TGSM ++ +D G + +F GG G N D+ +I+ D
Sbjct: 1224 GSKTGSMSKQELDDILKFGTEE-LFKDEATDGG-GDNKEGEDSSVIHYDD 1271
Score = 41 (19.5 bits), Expect = 8.6e-81, Sum P(6) = 8.6e-81
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 158 YLVKWRDLPYDKATWEDE 175
+ VKW+ + Y +W E
Sbjct: 563 FFVKWQGMSYWHCSWVSE 580
Score = 41 (19.5 bits), Expect = 8.0e-69, Sum P(6) = 8.0e-69
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 614 YLVKWRDLPYDKATWEDE 631
+ VKW+ + Y +W E
Sbjct: 563 FFVKWQGMSYWHCSWVSE 580
Score = 38 (18.4 bits), Expect = 9.6e-07, Sum P(3) = 9.6e-07
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 204 ELQEDEDGASGSKPRRYTPPPEKPT 228
EL E E+ S+P +P P+ PT
Sbjct: 1540 ELAEVEENKKMSQPG--SPSPKTPT 1562
Score = 37 (18.1 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 12/52 (23%), Positives = 21/52 (40%)
Query: 204 ELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLE 255
E++E++ + P TP P P PP D G+++ L+
Sbjct: 1543 EVEENKKMSQPGSPSPKTPTPSTPGDTQPNTPAPAPPAED--GIKIEENSLK 1592
>UNIPROTKB|F1SLR5 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 OMA:ERMLLCR EMBL:CU914489 EMBL:GACC01000070
RefSeq:XP_003126577.3 UniGene:Ssc.25044 Ensembl:ENSSSCT00000000759
GeneID:100515610 KEGG:ssc:100515610 Uniprot:F1SLR5
Length = 1912
Score = 1489 (529.2 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 299/523 (57%), Positives = 368/523 (70%)
Query: 77 LEVYHPQLLKSYMKKMNNDFTXXXXXXXXXXXXXKRMARLNRHNINDEELEKKYYRYGIK 136
LE++ + ++Y +K ND R R N+ + E+E+++YRYGIK
Sbjct: 563 LELHCQVMFRNYQRK--NDMDEPPSGDFGGDEEKSRK-RKNK-DPKFAEMEERFYRYGIK 618
Query: 137 PEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPG---LKESIEFYNXXX 193
PEW++ +R++N + G YL+KWRDLPYD+A+WE E+ +I K+S ++N
Sbjct: 619 PEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDVEIQDYDLFKQS--YWNHR- 675
Query: 194 XXXXXXXXXXELQEDEDGASGSKP-----RRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQ 248
EL E+G G K R+ PPE PT D KYE+QP +LD TG
Sbjct: 676 ----------ELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDATGGT 725
Query: 249 LHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLS 308
LH YQ+EG+NWLR+SW Q DTILADEMGLGKT+QT FLYSL+KEGH KGPFLVSAPLS
Sbjct: 726 LHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLS 785
Query: 309 TIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPC-RIRS-STVKF 366
TIINWEREFE WAPD YVVTYVGDKD R ++R+++ S+ED A RGGK R++ ++VKF
Sbjct: 786 TIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASVKF 845
Query: 367 HVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPX 426
HVLLTSYELIT D+A+LGSI+WA L+VDEAHRLK+NQSKFF+ L+GYS+Q+KLLLTGTP
Sbjct: 846 HVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPL 905
Query: 427 XXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKN 486
TPE+F++L F EFADI+KE+Q+K+LHD+LGPHMLRRLKADV KN
Sbjct: 906 QNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKN 965
Query: 487 MPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLF 546
MPSK+E IVRVELSPMQKKYYKYILTRNFEALN +GGG QVSLLN++MDLKKCCNHPYLF
Sbjct: 966 MPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLF 1025
Query: 547 PAAAEEAP-VQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
P AA EAP + G Y+ AL RA+G E GHR
Sbjct: 1026 PVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHR 1068
Score = 442 (160.7 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 83/97 (85%), Positives = 89/97 (91%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MTKMLD+LED+L+ EGYKYERIDG ITG+MRQE+IDRFNAPGA QF FLLSTR+GGL
Sbjct: 1072 FSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGL 1131
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ K
Sbjct: 1132 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKK 1168
Score = 410 (149.4 bits), Expect = 2.6e-236, Sum P(5) = 2.6e-236
Identities = 78/91 (85%), Positives = 84/91 (92%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ KVMIYRFVTR SVEER+TQVAK+KM
Sbjct: 1133 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKM 1192
Query: 802 MLTHLVVRPGMGGKQANFTKQELDDILRFGT 832
MLTHLVVRPG+G K + +KQELDDIL+FGT
Sbjct: 1193 MLTHLVVRPGLGSKTGSMSKQELDDILKFGT 1223
Score = 178 (67.7 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 37/45 (82%), Positives = 42/45 (93%)
Query: 939 EVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRL 983
+VL QLEELLSDMK+DV+RLPAT+ARIPPVA RL MSER+ILSRL
Sbjct: 1852 KVLKQLEELLSDMKADVTRLPATIARIPPVAVRLQMSERNILSRL 1896
Score = 168 (64.2 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 32/42 (76%), Positives = 36/42 (85%)
Query: 848 IIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQ 889
IIKQE E+ DP YW KLLRHHYEQ QED++R LGKGKR+RKQ
Sbjct: 1302 IIKQE-ESVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQ 1342
Score = 166 (63.5 bits), Expect = 7.2e-82, Sum P(6) = 7.2e-82
Identities = 26/49 (53%), Positives = 38/49 (77%)
Query: 587 HRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDI 635
+RYGIKPEW++ +R++N + G YL+KWRDLPYD+A+WE E+ +I
Sbjct: 613 YRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDVEI 661
Score = 97 (39.2 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 20/32 (62%), Positives = 26/32 (81%)
Query: 910 RRSAKKKEMSKQERDRPLPPLLARVGGNIEVL 941
RR ++K + ++D+PLPPLLARVGGNIEVL
Sbjct: 1385 RRPSRKG--LRNDKDKPLPPLLARVGGNIEVL 1414
Score = 51 (23.0 bits), Expect = 7.2e-82, Sum P(6) = 7.2e-82
Identities = 33/130 (25%), Positives = 57/130 (43%)
Query: 205 LQEDEDGAS---GSKPRRYT-PPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWL 260
L+ D +G+ G K ++ P EK + RK+ E++ DD+ + QL L
Sbjct: 101 LRSDSEGSDYTPGKKKKKKLGPKKEKKSKSKRKEEEEEDDDDDDSKEPKSSAQL-----L 155
Query: 261 RYSWG-QNIDTILADEMGLGKTIQTITFLYSLFKEG-----HCKGPFLVSAPLSTIIN-- 312
WG ++ID + ++E +T+T Y F + K P + + + ++
Sbjct: 156 E-DWGMEDIDHVFSEE-----DYRTLTN-YKAFSQFVRPLIAAKNPKIAVSKMMMVLGAK 208
Query: 313 WEREFETWAP 322
W REF T P
Sbjct: 209 W-REFSTNNP 217
Score = 46 (21.3 bits), Expect = 5.0e-198, Sum P(5) = 5.0e-198
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 670 GNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSD 719
G+ TGSM ++ +D G + +F GG G N D+ +I+ D
Sbjct: 1204 GSKTGSMSKQELDDILKFGTEE-LFKDEATDGG-GDNKEGEDSSVIHYDD 1251
Score = 41 (19.5 bits), Expect = 7.9e-81, Sum P(6) = 7.9e-81
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 158 YLVKWRDLPYDKATWEDE 175
+ VKW+ + Y +W E
Sbjct: 543 FFVKWQGMSYWHCSWVSE 560
Score = 41 (19.5 bits), Expect = 7.3e-69, Sum P(6) = 7.3e-69
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 614 YLVKWRDLPYDKATWEDE 631
+ VKW+ + Y +W E
Sbjct: 543 FFVKWQGMSYWHCSWVSE 560
Score = 38 (18.4 bits), Expect = 9.3e-07, Sum P(3) = 9.3e-07
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 204 ELQEDEDGASGSKPRRYTPPPEKPT 228
EL E E+ S+P +P P+ PT
Sbjct: 1520 ELAEVEENKKMSQPG--SPSPKTPT 1542
Score = 37 (18.1 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 12/52 (23%), Positives = 21/52 (40%)
Query: 204 ELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLE 255
E++E++ + P TP P P PP D G+++ L+
Sbjct: 1523 EVEENKKMSQPGSPSPKTPTPSTPGDTQPNTPAPAPPAED--GIKIEENSLK 1572
>UNIPROTKB|F5GWX5 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AC006064
IPI:IPI00000846 HGNC:HGNC:1919 ChiTaRS:CHD4
ProteinModelPortal:F5GWX5 SMR:F5GWX5 PRIDE:F5GWX5
Ensembl:ENST00000544040 UCSC:uc001qpn.3 ArrayExpress:F5GWX5
Bgee:F5GWX5 Uniprot:F5GWX5
Length = 1905
Score = 1489 (529.2 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 299/523 (57%), Positives = 368/523 (70%)
Query: 77 LEVYHPQLLKSYMKKMNNDFTXXXXXXXXXXXXXKRMARLNRHNINDEELEKKYYRYGIK 136
LE++ + ++Y +K ND R R N+ + E+E+++YRYGIK
Sbjct: 556 LELHCQVMFRNYQRK--NDMDEPPSGDFGGDEEKSRK-RKNK-DPKFAEMEERFYRYGIK 611
Query: 137 PEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPG---LKESIEFYNXXX 193
PEW++ +R++N + G YL+KWRDLPYD+A+WE E+ +I K+S ++N
Sbjct: 612 PEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDVEIQDYDLFKQS--YWNHR- 668
Query: 194 XXXXXXXXXXELQEDEDGASGSKP-----RRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQ 248
EL E+G G K R+ PPE PT D KYE+QP +LD TG
Sbjct: 669 ----------ELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDATGGT 718
Query: 249 LHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLS 308
LH YQ+EG+NWLR+SW Q DTILADEMGLGKT+QT FLYSL+KEGH KGPFLVSAPLS
Sbjct: 719 LHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLS 778
Query: 309 TIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPC-RIRS-STVKF 366
TIINWEREFE WAPD YVVTYVGDKD R ++R+++ S+ED A RGGK R++ ++VKF
Sbjct: 779 TIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASVKF 838
Query: 367 HVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPX 426
HVLLTSYELIT D+A+LGSI+WA L+VDEAHRLK+NQSKFF+ L+GYS+Q+KLLLTGTP
Sbjct: 839 HVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPL 898
Query: 427 XXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKN 486
TPE+F++L F EFADI+KE+Q+K+LHD+LGPHMLRRLKADV KN
Sbjct: 899 QNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKN 958
Query: 487 MPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLF 546
MPSK+E IVRVELSPMQKKYYKYILTRNFEALN +GGG QVSLLN++MDLKKCCNHPYLF
Sbjct: 959 MPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLF 1018
Query: 547 PAAAEEAP-VQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
P AA EAP + G Y+ AL RA+G E GHR
Sbjct: 1019 PVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHR 1061
Score = 442 (160.7 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 83/97 (85%), Positives = 89/97 (91%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MTKMLD+LED+L+ EGYKYERIDG ITG+MRQE+IDRFNAPGA QF FLLSTR+GGL
Sbjct: 1065 FSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGL 1124
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ K
Sbjct: 1125 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKK 1161
Score = 410 (149.4 bits), Expect = 2.6e-236, Sum P(5) = 2.6e-236
Identities = 78/91 (85%), Positives = 84/91 (92%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ KVMIYRFVTR SVEER+TQVAK+KM
Sbjct: 1126 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKM 1185
Query: 802 MLTHLVVRPGMGGKQANFTKQELDDILRFGT 832
MLTHLVVRPG+G K + +KQELDDIL+FGT
Sbjct: 1186 MLTHLVVRPGLGSKTGSMSKQELDDILKFGT 1216
Score = 178 (67.7 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 37/45 (82%), Positives = 42/45 (93%)
Query: 939 EVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRL 983
+VL QLEELLSDMK+DV+RLPAT+ARIPPVA RL MSER+ILSRL
Sbjct: 1845 KVLKQLEELLSDMKADVTRLPATIARIPPVAVRLQMSERNILSRL 1889
Score = 168 (64.2 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 32/42 (76%), Positives = 36/42 (85%)
Query: 848 IIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQ 889
IIKQE E+ DP YW KLLRHHYEQ QED++R LGKGKR+RKQ
Sbjct: 1295 IIKQE-ESVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQ 1335
Score = 166 (63.5 bits), Expect = 7.0e-82, Sum P(6) = 7.0e-82
Identities = 26/49 (53%), Positives = 38/49 (77%)
Query: 587 HRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDI 635
+RYGIKPEW++ +R++N + G YL+KWRDLPYD+A+WE E+ +I
Sbjct: 606 YRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDVEI 654
Score = 97 (39.2 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 20/32 (62%), Positives = 26/32 (81%)
Query: 910 RRSAKKKEMSKQERDRPLPPLLARVGGNIEVL 941
RR ++K + ++D+PLPPLLARVGGNIEVL
Sbjct: 1378 RRPSRKG--LRNDKDKPLPPLLARVGGNIEVL 1407
Score = 51 (23.0 bits), Expect = 7.0e-82, Sum P(6) = 7.0e-82
Identities = 33/130 (25%), Positives = 57/130 (43%)
Query: 205 LQEDEDGAS---GSKPRRYT-PPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWL 260
L+ D +G+ G K ++ P EK + RK+ E++ DD+ + QL L
Sbjct: 94 LRSDSEGSDYTPGKKKKKKLGPKKEKKSKSKRKEEEEEEDDDDDSKEPKSSAQL-----L 148
Query: 261 RYSWG-QNIDTILADEMGLGKTIQTITFLYSLFKEG-----HCKGPFLVSAPLSTIIN-- 312
WG ++ID + ++E +T+T Y F + K P + + + ++
Sbjct: 149 E-DWGMEDIDHVFSEE-----DYRTLTN-YKAFSQFVRPLIAAKNPKIAVSKMMMVLGAK 201
Query: 313 WEREFETWAP 322
W REF T P
Sbjct: 202 W-REFSTNNP 210
Score = 46 (21.3 bits), Expect = 5.0e-198, Sum P(5) = 5.0e-198
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 670 GNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSD 719
G+ TGSM ++ +D G + +F GG G N D+ +I+ D
Sbjct: 1197 GSKTGSMSKQELDDILKFGTEE-LFKDEATDGG-GDNKEGEDSSVIHYDD 1244
Score = 41 (19.5 bits), Expect = 7.6e-81, Sum P(6) = 7.6e-81
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 158 YLVKWRDLPYDKATWEDE 175
+ VKW+ + Y +W E
Sbjct: 536 FFVKWQGMSYWHCSWVSE 553
Score = 41 (19.5 bits), Expect = 7.1e-69, Sum P(6) = 7.1e-69
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 614 YLVKWRDLPYDKATWEDE 631
+ VKW+ + Y +W E
Sbjct: 536 FFVKWQGMSYWHCSWVSE 553
Score = 38 (18.4 bits), Expect = 9.2e-07, Sum P(3) = 9.2e-07
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 204 ELQEDEDGASGSKPRRYTPPPEKPT 228
EL E E+ S+P +P P+ PT
Sbjct: 1513 ELAEVEENKKMSQPG--SPSPKTPT 1535
>UNIPROTKB|Q14839 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 EMBL:X86691
EMBL:AC006064 EMBL:BC038596 IPI:IPI00000846 IPI:IPI00455210
RefSeq:NP_001264.2 UniGene:Hs.162233 PDB:1MM2 PDB:1MM3 PDB:2EE1
PDB:2L5U PDB:2L75 PDBsum:1MM2 PDBsum:1MM3 PDBsum:2EE1 PDBsum:2L5U
PDBsum:2L75 ProteinModelPortal:Q14839 SMR:Q14839 DIP:DIP-31183N
IntAct:Q14839 MINT:MINT-349766 STRING:Q14839 PhosphoSite:Q14839
DMDM:311033360 PaxDb:Q14839 PRIDE:Q14839 DNASU:1108
Ensembl:ENST00000309577 Ensembl:ENST00000357008
Ensembl:ENST00000544484 GeneID:1108 KEGG:hsa:1108 UCSC:uc001qpo.3
UCSC:uc001qpp.3 CTD:1108 GeneCards:GC12M006679 H-InvDB:HIX0201859
HGNC:HGNC:1919 HPA:HPA012008 MIM:603277 neXtProt:NX_Q14839
PharmGKB:PA26455 KO:K11643 OMA:ERMLLCR OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EvolutionaryTrace:Q14839 GenomeRNAi:1108 NextBio:4598
PMAP-CutDB:Q14839 ArrayExpress:Q14839 Bgee:Q14839 CleanEx:HS_CHD4
Genevestigator:Q14839 GermOnline:ENSG00000111642 Uniprot:Q14839
Length = 1912
Score = 1489 (529.2 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 299/523 (57%), Positives = 368/523 (70%)
Query: 77 LEVYHPQLLKSYMKKMNNDFTXXXXXXXXXXXXXKRMARLNRHNINDEELEKKYYRYGIK 136
LE++ + ++Y +K ND R R N+ + E+E+++YRYGIK
Sbjct: 563 LELHCQVMFRNYQRK--NDMDEPPSGDFGGDEEKSRK-RKNK-DPKFAEMEERFYRYGIK 618
Query: 137 PEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPG---LKESIEFYNXXX 193
PEW++ +R++N + G YL+KWRDLPYD+A+WE E+ +I K+S ++N
Sbjct: 619 PEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDVEIQDYDLFKQS--YWNHR- 675
Query: 194 XXXXXXXXXXELQEDEDGASGSKP-----RRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQ 248
EL E+G G K R+ PPE PT D KYE+QP +LD TG
Sbjct: 676 ----------ELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDATGGT 725
Query: 249 LHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLS 308
LH YQ+EG+NWLR+SW Q DTILADEMGLGKT+QT FLYSL+KEGH KGPFLVSAPLS
Sbjct: 726 LHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLS 785
Query: 309 TIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPC-RIRS-STVKF 366
TIINWEREFE WAPD YVVTYVGDKD R ++R+++ S+ED A RGGK R++ ++VKF
Sbjct: 786 TIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASVKF 845
Query: 367 HVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPX 426
HVLLTSYELIT D+A+LGSI+WA L+VDEAHRLK+NQSKFF+ L+GYS+Q+KLLLTGTP
Sbjct: 846 HVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPL 905
Query: 427 XXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKN 486
TPE+F++L F EFADI+KE+Q+K+LHD+LGPHMLRRLKADV KN
Sbjct: 906 QNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKN 965
Query: 487 MPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLF 546
MPSK+E IVRVELSPMQKKYYKYILTRNFEALN +GGG QVSLLN++MDLKKCCNHPYLF
Sbjct: 966 MPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLF 1025
Query: 547 PAAAEEAP-VQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
P AA EAP + G Y+ AL RA+G E GHR
Sbjct: 1026 PVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHR 1068
Score = 442 (160.7 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 83/97 (85%), Positives = 89/97 (91%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MTKMLD+LED+L+ EGYKYERIDG ITG+MRQE+IDRFNAPGA QF FLLSTR+GGL
Sbjct: 1072 FSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGL 1131
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ K
Sbjct: 1132 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKK 1168
Score = 410 (149.4 bits), Expect = 2.6e-236, Sum P(5) = 2.6e-236
Identities = 78/91 (85%), Positives = 84/91 (92%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ KVMIYRFVTR SVEER+TQVAK+KM
Sbjct: 1133 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKM 1192
Query: 802 MLTHLVVRPGMGGKQANFTKQELDDILRFGT 832
MLTHLVVRPG+G K + +KQELDDIL+FGT
Sbjct: 1193 MLTHLVVRPGLGSKTGSMSKQELDDILKFGT 1223
Score = 178 (67.7 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 37/45 (82%), Positives = 42/45 (93%)
Query: 939 EVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRL 983
+VL QLEELLSDMK+DV+RLPAT+ARIPPVA RL MSER+ILSRL
Sbjct: 1852 KVLKQLEELLSDMKADVTRLPATIARIPPVAVRLQMSERNILSRL 1896
Score = 168 (64.2 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 32/42 (76%), Positives = 36/42 (85%)
Query: 848 IIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQ 889
IIKQE E+ DP YW KLLRHHYEQ QED++R LGKGKR+RKQ
Sbjct: 1302 IIKQE-ESVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQ 1342
Score = 166 (63.5 bits), Expect = 7.2e-82, Sum P(6) = 7.2e-82
Identities = 26/49 (53%), Positives = 38/49 (77%)
Query: 587 HRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDI 635
+RYGIKPEW++ +R++N + G YL+KWRDLPYD+A+WE E+ +I
Sbjct: 613 YRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDVEI 661
Score = 97 (39.2 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 20/32 (62%), Positives = 26/32 (81%)
Query: 910 RRSAKKKEMSKQERDRPLPPLLARVGGNIEVL 941
RR ++K + ++D+PLPPLLARVGGNIEVL
Sbjct: 1385 RRPSRKG--LRNDKDKPLPPLLARVGGNIEVL 1414
Score = 51 (23.0 bits), Expect = 7.2e-82, Sum P(6) = 7.2e-82
Identities = 33/130 (25%), Positives = 57/130 (43%)
Query: 205 LQEDEDGAS---GSKPRRYT-PPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWL 260
L+ D +G+ G K ++ P EK + RK+ E++ DD+ + QL L
Sbjct: 101 LRSDSEGSDYTPGKKKKKKLGPKKEKKSKSKRKEEEEEEDDDDDSKEPKSSAQL-----L 155
Query: 261 RYSWG-QNIDTILADEMGLGKTIQTITFLYSLFKEG-----HCKGPFLVSAPLSTIIN-- 312
WG ++ID + ++E +T+T Y F + K P + + + ++
Sbjct: 156 E-DWGMEDIDHVFSEE-----DYRTLTN-YKAFSQFVRPLIAAKNPKIAVSKMMMVLGAK 208
Query: 313 WEREFETWAP 322
W REF T P
Sbjct: 209 W-REFSTNNP 217
Score = 46 (21.3 bits), Expect = 5.0e-198, Sum P(5) = 5.0e-198
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 670 GNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSD 719
G+ TGSM ++ +D G + +F GG G N D+ +I+ D
Sbjct: 1204 GSKTGSMSKQELDDILKFGTEE-LFKDEATDGG-GDNKEGEDSSVIHYDD 1251
Score = 41 (19.5 bits), Expect = 7.9e-81, Sum P(6) = 7.9e-81
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 158 YLVKWRDLPYDKATWEDE 175
+ VKW+ + Y +W E
Sbjct: 543 FFVKWQGMSYWHCSWVSE 560
Score = 41 (19.5 bits), Expect = 7.3e-69, Sum P(6) = 7.3e-69
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 614 YLVKWRDLPYDKATWEDE 631
+ VKW+ + Y +W E
Sbjct: 543 FFVKWQGMSYWHCSWVSE 560
Score = 38 (18.4 bits), Expect = 9.3e-07, Sum P(3) = 9.3e-07
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 204 ELQEDEDGASGSKPRRYTPPPEKPT 228
EL E E+ S+P +P P+ PT
Sbjct: 1520 ELAEVEENKKMSQPG--SPSPKTPT 1542
>MGI|MGI:1344380 [details] [associations]
symbol:Chd4 "chromodomain helicase DNA binding protein 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=ISO] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 MGI:MGI:1344380 Pfam:PF00385
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
GeneTree:ENSGT00560000076896 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
HOVERGEN:HBG005326 CTD:1108 KO:K11643 OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EMBL:BC058578 IPI:IPI00396802 RefSeq:NP_666091.1
UniGene:Mm.333388 ProteinModelPortal:Q6PDQ2 SMR:Q6PDQ2
DIP:DIP-59651N IntAct:Q6PDQ2 STRING:Q6PDQ2 PhosphoSite:Q6PDQ2
PaxDb:Q6PDQ2 PRIDE:Q6PDQ2 Ensembl:ENSMUST00000056889 GeneID:107932
KEGG:mmu:107932 UCSC:uc009dtk.1 NextBio:359735 PMAP-CutDB:Q6PDQ2
Bgee:Q6PDQ2 CleanEx:MM_CHD4 Genevestigator:Q6PDQ2
GermOnline:ENSMUSG00000063870 Uniprot:Q6PDQ2
Length = 1915
Score = 1489 (529.2 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 299/523 (57%), Positives = 368/523 (70%)
Query: 77 LEVYHPQLLKSYMKKMNNDFTXXXXXXXXXXXXXKRMARLNRHNINDEELEKKYYRYGIK 136
LE++ + ++Y +K ND R R N+ + E+E+++YRYGIK
Sbjct: 556 LELHCQVMFRNYQRK--NDMDEPPSGDFGGDEEKSRK-RKNK-DPKFAEMEERFYRYGIK 611
Query: 137 PEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPG---LKESIEFYNXXX 193
PEW++ +R++N + G YL+KWRDLPYD+A+WE E+ +I K+S ++N
Sbjct: 612 PEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDVEIQDYDLFKQS--YWNHR- 668
Query: 194 XXXXXXXXXXELQEDEDGASGSKP-----RRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQ 248
EL E+G G K R+ PPE PT D KYE+QP +LD TG
Sbjct: 669 ----------ELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDATGGT 718
Query: 249 LHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLS 308
LH YQ+EG+NWLR+SW Q DTILADEMGLGKT+QT FLYSL+KEGH KGPFLVSAPLS
Sbjct: 719 LHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLS 778
Query: 309 TIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPC-RIRS-STVKF 366
TIINWEREFE WAPD YVVTYVGDKD R ++R+++ S+ED A RGGK R++ ++VKF
Sbjct: 779 TIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASVKF 838
Query: 367 HVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPX 426
HVLLTSYELIT D+A+LGSI+WA L+VDEAHRLK+NQSKFF+ L+GYS+Q+KLLLTGTP
Sbjct: 839 HVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPL 898
Query: 427 XXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKN 486
TPE+F++L F EFADI+KE+Q+K+LHD+LGPHMLRRLKADV KN
Sbjct: 899 QNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKN 958
Query: 487 MPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLF 546
MPSK+E IVRVELSPMQKKYYKYILTRNFEALN +GGG QVSLLN++MDLKKCCNHPYLF
Sbjct: 959 MPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLF 1018
Query: 547 PAAAEEAP-VQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
P AA EAP + G Y+ AL RA+G E GHR
Sbjct: 1019 PVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHR 1061
Score = 442 (160.7 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 83/97 (85%), Positives = 89/97 (91%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MTKMLD+LED+L+ EGYKYERIDG ITG+MRQE+IDRFNAPGA QF FLLSTR+GGL
Sbjct: 1065 FSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGL 1124
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ K
Sbjct: 1125 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKK 1161
Score = 410 (149.4 bits), Expect = 2.6e-236, Sum P(5) = 2.6e-236
Identities = 78/91 (85%), Positives = 84/91 (92%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ KVMIYRFVTR SVEER+TQVAK+KM
Sbjct: 1126 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKM 1185
Query: 802 MLTHLVVRPGMGGKQANFTKQELDDILRFGT 832
MLTHLVVRPG+G K + +KQELDDIL+FGT
Sbjct: 1186 MLTHLVVRPGLGSKTGSMSKQELDDILKFGT 1216
Score = 178 (67.7 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 37/45 (82%), Positives = 42/45 (93%)
Query: 939 EVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRL 983
+VL QLEELLSDMK+DV+RLPAT+ARIPPVA RL MSER+ILSRL
Sbjct: 1855 KVLKQLEELLSDMKADVTRLPATIARIPPVAVRLQMSERNILSRL 1899
Score = 168 (64.2 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 32/42 (76%), Positives = 36/42 (85%)
Query: 848 IIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQ 889
IIKQE E+ DP YW KLLRHHYEQ QED++R LGKGKR+RKQ
Sbjct: 1295 IIKQE-ESVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQ 1335
Score = 166 (63.5 bits), Expect = 7.3e-82, Sum P(6) = 7.3e-82
Identities = 26/49 (53%), Positives = 38/49 (77%)
Query: 587 HRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDI 635
+RYGIKPEW++ +R++N + G YL+KWRDLPYD+A+WE E+ +I
Sbjct: 606 YRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDVEI 654
Score = 97 (39.2 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 20/32 (62%), Positives = 26/32 (81%)
Query: 910 RRSAKKKEMSKQERDRPLPPLLARVGGNIEVL 941
RR ++K + ++D+PLPPLLARVGGNIEVL
Sbjct: 1378 RRPSRKG--LRNDKDKPLPPLLARVGGNIEVL 1407
Score = 51 (23.0 bits), Expect = 7.3e-82, Sum P(6) = 7.3e-82
Identities = 33/130 (25%), Positives = 57/130 (43%)
Query: 205 LQEDEDGAS---GSKPRRYT-PPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWL 260
L+ D +G+ G K ++ P EK + RK+ E++ DD+ + QL L
Sbjct: 94 LRSDSEGSDYTPGKKKKKKLGPKKEKKSKSKRKEEEEEEDEDDDSKEPKSSAQL-----L 148
Query: 261 RYSWG-QNIDTILADEMGLGKTIQTITFLYSLFKEG-----HCKGPFLVSAPLSTIIN-- 312
WG ++ID + ++E +T+T Y F + K P + + + ++
Sbjct: 149 E-DWGMEDIDHVFSEE-----DYRTLTN-YKAFSQFVRPLIAAKNPKIAVSKMMMVLGAK 201
Query: 313 WEREFETWAP 322
W REF T P
Sbjct: 202 W-REFSTNNP 210
Score = 46 (21.3 bits), Expect = 5.0e-198, Sum P(5) = 5.0e-198
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 670 GNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSD 719
G+ TGSM ++ +D G + +F GG G N D+ +I+ D
Sbjct: 1197 GSKTGSMSKQELDDILKFGTEE-LFKDEATDGG-GDNKEGEDSSVIHYDD 1244
Score = 41 (19.5 bits), Expect = 8.0e-81, Sum P(6) = 8.0e-81
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 158 YLVKWRDLPYDKATWEDE 175
+ VKW+ + Y +W E
Sbjct: 536 FFVKWQGMSYWHCSWVSE 553
Score = 41 (19.5 bits), Expect = 7.4e-69, Sum P(6) = 7.4e-69
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 614 YLVKWRDLPYDKATWEDE 631
+ VKW+ + Y +W E
Sbjct: 536 FFVKWQGMSYWHCSWVSE 553
Score = 38 (18.4 bits), Expect = 9.3e-07, Sum P(3) = 9.3e-07
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 204 ELQEDEDGASGSKPRRYTPPPEKPT 228
EL E E+ S+P +P P+ PT
Sbjct: 1513 ELAEVEENKKMSQPG--SPSPKTPT 1535
>UNIPROTKB|E9PU01 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI01016558 PRIDE:E9PU01 Ensembl:ENSRNOT00000055970
ArrayExpress:E9PU01 Uniprot:E9PU01
Length = 1915
Score = 1489 (529.2 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 299/523 (57%), Positives = 368/523 (70%)
Query: 77 LEVYHPQLLKSYMKKMNNDFTXXXXXXXXXXXXXKRMARLNRHNINDEELEKKYYRYGIK 136
LE++ + ++Y +K ND R R N+ + E+E+++YRYGIK
Sbjct: 556 LELHCQVMFRNYQRK--NDMDEPPSGDFGGDEEKSRK-RKNK-DPKFAEMEERFYRYGIK 611
Query: 137 PEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPG---LKESIEFYNXXX 193
PEW++ +R++N + G YL+KWRDLPYD+A+WE E+ +I K+S ++N
Sbjct: 612 PEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDVEIQDYDLFKQS--YWNHR- 668
Query: 194 XXXXXXXXXXELQEDEDGASGSKP-----RRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQ 248
EL E+G G K R+ PPE PT D KYE+QP +LD TG
Sbjct: 669 ----------ELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDATGGT 718
Query: 249 LHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLS 308
LH YQ+EG+NWLR+SW Q DTILADEMGLGKT+QT FLYSL+KEGH KGPFLVSAPLS
Sbjct: 719 LHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLS 778
Query: 309 TIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPC-RIRS-STVKF 366
TIINWEREFE WAPD YVVTYVGDKD R ++R+++ S+ED A RGGK R++ ++VKF
Sbjct: 779 TIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASVKF 838
Query: 367 HVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPX 426
HVLLTSYELIT D+A+LGSI+WA L+VDEAHRLK+NQSKFF+ L+GYS+Q+KLLLTGTP
Sbjct: 839 HVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPL 898
Query: 427 XXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKN 486
TPE+F++L F EFADI+KE+Q+K+LHD+LGPHMLRRLKADV KN
Sbjct: 899 QNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKN 958
Query: 487 MPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLF 546
MPSK+E IVRVELSPMQKKYYKYILTRNFEALN +GGG QVSLLN++MDLKKCCNHPYLF
Sbjct: 959 MPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLF 1018
Query: 547 PAAAEEAP-VQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
P AA EAP + G Y+ AL RA+G E GHR
Sbjct: 1019 PVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHR 1061
Score = 442 (160.7 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 83/97 (85%), Positives = 89/97 (91%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MTKMLD+LED+L+ EGYKYERIDG ITG+MRQE+IDRFNAPGA QF FLLSTR+GGL
Sbjct: 1065 FSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGL 1124
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ K
Sbjct: 1125 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKK 1161
Score = 410 (149.4 bits), Expect = 2.6e-236, Sum P(5) = 2.6e-236
Identities = 78/91 (85%), Positives = 84/91 (92%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ KVMIYRFVTR SVEER+TQVAK+KM
Sbjct: 1126 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKM 1185
Query: 802 MLTHLVVRPGMGGKQANFTKQELDDILRFGT 832
MLTHLVVRPG+G K + +KQELDDIL+FGT
Sbjct: 1186 MLTHLVVRPGLGSKTGSMSKQELDDILKFGT 1216
Score = 178 (67.7 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 37/45 (82%), Positives = 42/45 (93%)
Query: 939 EVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRL 983
+VL QLEELLSDMK+DV+RLPAT+ARIPPVA RL MSER+ILSRL
Sbjct: 1855 KVLKQLEELLSDMKADVTRLPATIARIPPVAVRLQMSERNILSRL 1899
Score = 168 (64.2 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 32/42 (76%), Positives = 36/42 (85%)
Query: 848 IIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQ 889
IIKQE E+ DP YW KLLRHHYEQ QED++R LGKGKR+RKQ
Sbjct: 1295 IIKQE-ESVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQ 1335
Score = 166 (63.5 bits), Expect = 7.3e-82, Sum P(6) = 7.3e-82
Identities = 26/49 (53%), Positives = 38/49 (77%)
Query: 587 HRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDI 635
+RYGIKPEW++ +R++N + G YL+KWRDLPYD+A+WE E+ +I
Sbjct: 606 YRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDVEI 654
Score = 97 (39.2 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 20/32 (62%), Positives = 26/32 (81%)
Query: 910 RRSAKKKEMSKQERDRPLPPLLARVGGNIEVL 941
RR ++K + ++D+PLPPLLARVGGNIEVL
Sbjct: 1378 RRPSRKG--LRNDKDKPLPPLLARVGGNIEVL 1407
Score = 51 (23.0 bits), Expect = 7.3e-82, Sum P(6) = 7.3e-82
Identities = 33/130 (25%), Positives = 57/130 (43%)
Query: 205 LQEDEDGAS---GSKPRRYT-PPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWL 260
L+ D +G+ G K ++ P EK + RK+ E++ DD+ + QL L
Sbjct: 94 LRSDSEGSDYTPGKKKKKKLGPKKEKKSKSKRKEEEEEEDDDDDSKEPKSSAQL-----L 148
Query: 261 RYSWG-QNIDTILADEMGLGKTIQTITFLYSLFKEG-----HCKGPFLVSAPLSTIIN-- 312
WG ++ID + ++E +T+T Y F + K P + + + ++
Sbjct: 149 E-DWGMEDIDHVFSEE-----DYRTLTN-YKAFSQFVRPLIAAKNPKIAVSKMMMVLGAK 201
Query: 313 WEREFETWAP 322
W REF T P
Sbjct: 202 W-REFSTNNP 210
Score = 46 (21.3 bits), Expect = 5.0e-198, Sum P(5) = 5.0e-198
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 670 GNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSD 719
G+ TGSM ++ +D G + +F GG G N D+ +I+ D
Sbjct: 1197 GSKTGSMSKQELDDILKFGTEE-LFKDEATDGG-GDNKEGEDSSVIHYDD 1244
Score = 41 (19.5 bits), Expect = 8.0e-81, Sum P(6) = 8.0e-81
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 158 YLVKWRDLPYDKATWEDE 175
+ VKW+ + Y +W E
Sbjct: 536 FFVKWQGMSYWHCSWVSE 553
Score = 41 (19.5 bits), Expect = 7.4e-69, Sum P(6) = 7.4e-69
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 614 YLVKWRDLPYDKATWEDE 631
+ VKW+ + Y +W E
Sbjct: 536 FFVKWQGMSYWHCSWVSE 553
Score = 38 (18.4 bits), Expect = 9.3e-07, Sum P(3) = 9.3e-07
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 204 ELQEDEDGASGSKPRRYTPPPEKPT 228
EL E E+ S+P +P P+ PT
Sbjct: 1513 ELAEVEENKKMSQPG--SPSPKTPT 1535
>UNIPROTKB|F1LM59 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00365698 PRIDE:F1LM59 Ensembl:ENSRNOT00000024864
ArrayExpress:F1LM59 Uniprot:F1LM59
Length = 1945
Score = 1489 (529.2 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 299/523 (57%), Positives = 368/523 (70%)
Query: 77 LEVYHPQLLKSYMKKMNNDFTXXXXXXXXXXXXXKRMARLNRHNINDEELEKKYYRYGIK 136
LE++ + ++Y +K ND R R N+ + E+E+++YRYGIK
Sbjct: 584 LELHCQVMFRNYQRK--NDMDEPPSGDFGGDEEKSRK-RKNK-DPKFAEMEERFYRYGIK 639
Query: 137 PEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPG---LKESIEFYNXXX 193
PEW++ +R++N + G YL+KWRDLPYD+A+WE E+ +I K+S ++N
Sbjct: 640 PEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDVEIQDYDLFKQS--YWNHR- 696
Query: 194 XXXXXXXXXXELQEDEDGASGSKP-----RRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQ 248
EL E+G G K R+ PPE PT D KYE+QP +LD TG
Sbjct: 697 ----------ELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDATGGT 746
Query: 249 LHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLS 308
LH YQ+EG+NWLR+SW Q DTILADEMGLGKT+QT FLYSL+KEGH KGPFLVSAPLS
Sbjct: 747 LHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLS 806
Query: 309 TIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPC-RIRS-STVKF 366
TIINWEREFE WAPD YVVTYVGDKD R ++R+++ S+ED A RGGK R++ ++VKF
Sbjct: 807 TIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASVKF 866
Query: 367 HVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPX 426
HVLLTSYELIT D+A+LGSI+WA L+VDEAHRLK+NQSKFF+ L+GYS+Q+KLLLTGTP
Sbjct: 867 HVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPL 926
Query: 427 XXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKN 486
TPE+F++L F EFADI+KE+Q+K+LHD+LGPHMLRRLKADV KN
Sbjct: 927 QNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKN 986
Query: 487 MPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLF 546
MPSK+E IVRVELSPMQKKYYKYILTRNFEALN +GGG QVSLLN++MDLKKCCNHPYLF
Sbjct: 987 MPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLF 1046
Query: 547 PAAAEEAP-VQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
P AA EAP + G Y+ AL RA+G E GHR
Sbjct: 1047 PVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHR 1089
Score = 442 (160.7 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 83/97 (85%), Positives = 89/97 (91%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MTKMLD+LED+L+ EGYKYERIDG ITG+MRQE+IDRFNAPGA QF FLLSTR+GGL
Sbjct: 1093 FSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGL 1152
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ K
Sbjct: 1153 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKK 1189
Score = 410 (149.4 bits), Expect = 2.6e-236, Sum P(5) = 2.6e-236
Identities = 78/91 (85%), Positives = 84/91 (92%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ KVMIYRFVTR SVEER+TQVAK+KM
Sbjct: 1154 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKM 1213
Query: 802 MLTHLVVRPGMGGKQANFTKQELDDILRFGT 832
MLTHLVVRPG+G K + +KQELDDIL+FGT
Sbjct: 1214 MLTHLVVRPGLGSKTGSMSKQELDDILKFGT 1244
Score = 178 (67.7 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 37/45 (82%), Positives = 42/45 (93%)
Query: 939 EVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRL 983
+VL QLEELLSDMK+DV+RLPAT+ARIPPVA RL MSER+ILSRL
Sbjct: 1889 KVLKQLEELLSDMKADVTRLPATIARIPPVAVRLQMSERNILSRL 1933
Score = 168 (64.2 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 32/42 (76%), Positives = 36/42 (85%)
Query: 848 IIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQ 889
IIKQE E+ DP YW KLLRHHYEQ QED++R LGKGKR+RKQ
Sbjct: 1323 IIKQE-ESVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQ 1363
Score = 166 (63.5 bits), Expect = 8.4e-82, Sum P(6) = 8.4e-82
Identities = 26/49 (53%), Positives = 38/49 (77%)
Query: 587 HRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDI 635
+RYGIKPEW++ +R++N + G YL+KWRDLPYD+A+WE E+ +I
Sbjct: 634 YRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDVEI 682
Score = 97 (39.2 bits), Expect = 1.1e-239, Sum P(5) = 1.1e-239
Identities = 20/32 (62%), Positives = 26/32 (81%)
Query: 910 RRSAKKKEMSKQERDRPLPPLLARVGGNIEVL 941
RR ++K + ++D+PLPPLLARVGGNIEVL
Sbjct: 1406 RRPSRKG--LRNDKDKPLPPLLARVGGNIEVL 1435
Score = 51 (23.0 bits), Expect = 8.4e-82, Sum P(6) = 8.4e-82
Identities = 33/130 (25%), Positives = 57/130 (43%)
Query: 205 LQEDEDGAS---GSKPRRYT-PPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWL 260
L+ D +G+ G K ++ P EK + RK+ E++ DD+ + QL L
Sbjct: 122 LRSDSEGSDYTPGKKKKKKLGPKKEKKSKSKRKEEEEEEDDDDDSKEPKSSAQL-----L 176
Query: 261 RYSWG-QNIDTILADEMGLGKTIQTITFLYSLFKEG-----HCKGPFLVSAPLSTIIN-- 312
WG ++ID + ++E +T+T Y F + K P + + + ++
Sbjct: 177 E-DWGMEDIDHVFSEE-----DYRTLTN-YKAFSQFVRPLIAAKNPKIAVSKMMMVLGAK 229
Query: 313 WEREFETWAP 322
W REF T P
Sbjct: 230 W-REFSTNNP 238
Score = 46 (21.3 bits), Expect = 5.0e-198, Sum P(5) = 5.0e-198
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 670 GNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSD 719
G+ TGSM ++ +D G + +F GG G N D+ +I+ D
Sbjct: 1225 GSKTGSMSKQELDDILKFGTEE-LFKDEATDGG-GDNKEGEDSSVIHYDD 1272
Score = 41 (19.5 bits), Expect = 9.1e-81, Sum P(6) = 9.1e-81
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 158 YLVKWRDLPYDKATWEDE 175
+ VKW+ + Y +W E
Sbjct: 564 FFVKWQGMSYWHCSWVSE 581
Score = 41 (19.5 bits), Expect = 8.4e-69, Sum P(6) = 8.4e-69
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 614 YLVKWRDLPYDKATWEDE 631
+ VKW+ + Y +W E
Sbjct: 564 FFVKWQGMSYWHCSWVSE 581
Score = 38 (18.4 bits), Expect = 9.8e-07, Sum P(3) = 9.8e-07
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 204 ELQEDEDGASGSKPRRYTPPPEKPT 228
EL E E+ S+P +P P+ PT
Sbjct: 1541 ELAEVEENKKMSQPG--SPSPKTPT 1563
>ZFIN|ZDB-GENE-041111-187 [details] [associations]
symbol:chd4a "chromodomain helicase DNA binding
protein 4a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-041111-187
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX004850
IPI:IPI00962864 Ensembl:ENSDART00000005453 ArrayExpress:F1QWV5
Bgee:F1QWV5 Uniprot:F1QWV5
Length = 1930
Score = 1448 (514.8 bits), Expect = 3.2e-238, Sum P(6) = 3.2e-238
Identities = 287/522 (54%), Positives = 362/522 (69%)
Query: 77 LEVYHPQLLKSYMKKMNNDFTXXXXXXXXXXXXXKRMARLNRHNINDEELEKKYYRYGIK 136
LE++ + ++Y +K ND ++ + + + +E+KYYR+GIK
Sbjct: 544 LEIHCQVMFRNYQRK--NDMDEPPPIDFGGEGEEEKSDKRKKKDPTYARMEEKYYRFGIK 601
Query: 137 PEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKE-SIEFYNXXXXX 195
EW++ +R++N + + YL+KWRDL YD+ATWE E+ D+P ++++N
Sbjct: 602 MEWMVIHRILNHSVDKKNNCHYLIKWRDLTYDQATWELEDMDLPDYDTYKLQYWNHR--- 658
Query: 196 XXXXXXXXELQEDEDGASGSK------PRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQL 249
EL ++G G K R+ PPE P D K+E+QP +LD TG L
Sbjct: 659 --------ELMMGDEGKPGKKIKIKGKMRKLDRPPENPVVDPTIKFERQPDYLDTTGGTL 710
Query: 250 HAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLST 309
H YQLEG+NWLR+SW Q DTILADEMGLGKT+QT FLYSL+KEGH KGPFLVSAPLST
Sbjct: 711 HPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLST 770
Query: 310 IINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGK-PCRIRS-STVKFH 367
IINWEREFE WAPD YVVTYVGDKD R V+R+++ S+E+ A RGGK P +++ ++VKFH
Sbjct: 771 IINWEREFEMWAPDMYVVTYVGDKDSRAVIRENEFSFENNAIRGGKKPSKMKKEASVKFH 830
Query: 368 VLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXX 427
VLLTSYELIT D A+LGSI+WA LVVDEAHRLK+NQSKFF+ L+ Y +Q+KLLLTGTP
Sbjct: 831 VLLTSYELITIDTAVLGSIDWACLVVDEAHRLKNNQSKFFRILNNYPLQHKLLLTGTPLQ 890
Query: 428 XXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNM 487
TPE+F++L F EFADI+KE+Q+K+LHD+LGPHMLRRLKADV K+M
Sbjct: 891 NNLEELFHLLNFLTPERFSNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKHM 950
Query: 488 PSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFP 547
PSK+E IVRVELSPMQKKYYK+ILTRNFEALN +GGG QVSLLN++MDLKKCCNHPYLFP
Sbjct: 951 PSKTELIVRVELSPMQKKYYKFILTRNFEALNTRGGGNQVSLLNVVMDLKKCCNHPYLFP 1010
Query: 548 AAA-EEAPVQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
AAA E A + G YE LT+++G E GHR
Sbjct: 1011 AAAMEAAKMPNGMYEGGGLTKSSGKLLLLQKMLRKLKEGGHR 1052
Score = 446 (162.1 bits), Expect = 3.2e-238, Sum P(6) = 3.2e-238
Identities = 83/97 (85%), Positives = 89/97 (91%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MTKMLD+LED+L+ EGYKYERIDG ITG MRQE+IDRFNAPGA QFVFLLSTR+GGL
Sbjct: 1056 FSQMTKMLDLLEDFLENEGYKYERIDGGITGGMRQEAIDRFNAPGAPQFVFLLSTRAGGL 1115
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
GINLATADTV+IYDSDWNPHNDIQAFSRAHRIGQ K
Sbjct: 1116 GINLATADTVVIYDSDWNPHNDIQAFSRAHRIGQNKK 1152
Score = 406 (148.0 bits), Expect = 5.0e-234, Sum P(6) = 5.0e-234
Identities = 76/91 (83%), Positives = 84/91 (92%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATADTV+IYDSDWNPHNDIQAFSRAHRIGQ KVMIYRFVT+ SVEER+TQVAK+KM
Sbjct: 1117 INLATADTVVIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTKASVEERITQVAKKKM 1176
Query: 802 MLTHLVVRPGMGGKQANFTKQELDDILRFGT 832
MLTHLVVRPG+G K + +KQELDDIL+FGT
Sbjct: 1177 MLTHLVVRPGLGSKTGSMSKQELDDILKFGT 1207
Score = 178 (67.7 bits), Expect = 3.2e-238, Sum P(6) = 3.2e-238
Identities = 37/45 (82%), Positives = 42/45 (93%)
Query: 939 EVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRL 983
+VL QLEELLSDMK+DV+RLPAT+ARIPPVA RL MSER+ILSRL
Sbjct: 1872 KVLKQLEELLSDMKADVTRLPATIARIPPVAVRLQMSERNILSRL 1916
Score = 168 (64.2 bits), Expect = 3.2e-238, Sum P(6) = 3.2e-238
Identities = 32/42 (76%), Positives = 36/42 (85%)
Query: 848 IIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQ 889
IIKQE E+ DP YW KLLRHHYEQ QED++R LGKGKR+RKQ
Sbjct: 1283 IIKQE-ESVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQ 1323
Score = 160 (61.4 bits), Expect = 4.6e-75, Sum P(8) = 4.6e-75
Identities = 35/101 (34%), Positives = 60/101 (59%)
Query: 584 EDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKE-SI 642
E +R+GIK EW++ +R++N + + YL+KWRDL YD+ATWE E+ D+P +
Sbjct: 593 EKYYRFGIKMEWMVIHRILNHSVDKKNNCHYLIKWRDLTYDQATWELEDMDLPDYDTYKL 652
Query: 643 EFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDR 683
+++N +++ + EG ++I I G MR+ +DR
Sbjct: 653 QYWNHRELM------MGDEGKPGKKI--KIKGKMRK--LDR 683
Score = 90 (36.7 bits), Expect = 3.2e-238, Sum P(6) = 3.2e-238
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 911 RSAKKKEMSKQERDRPLPPLLARVGGNIEVL 941
R +K + + ++D+PLPPLLARV GNIEVL
Sbjct: 1367 RRPNRKGL-RNDKDKPLPPLLARVSGNIEVL 1396
Score = 42 (19.8 bits), Expect = 4.6e-75, Sum P(8) = 4.6e-75
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 158 YLVKWRDLPYDKATWEDE 175
+ VKW+++ Y +W E
Sbjct: 524 FFVKWQNMSYWHCSWVTE 541
Score = 42 (19.8 bits), Expect = 2.5e-67, Sum P(6) = 2.5e-67
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 614 YLVKWRDLPYDKATWEDE 631
+ VKW+++ Y +W E
Sbjct: 524 FFVKWQNMSYWHCSWVTE 541
Score = 41 (19.5 bits), Expect = 2.0e-35, Sum P(7) = 2.0e-35
Identities = 11/50 (22%), Positives = 22/50 (44%)
Query: 744 LATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERV 793
L T DT ++ DW AHR+ + N+ +R + ++ ++
Sbjct: 838 LITIDTAVLGSIDWA----CLVVDEAHRL-KNNQSKFFRILNNYPLQHKL 882
Score = 40 (19.1 bits), Expect = 4.6e-75, Sum P(8) = 4.6e-75
Identities = 11/39 (28%), Positives = 17/39 (43%)
Query: 707 LATADTVIIYDSDWNPHNDIQAFSRAHRI-GQQNKYINL 744
L T DT ++ DW AHR+ Q+K+ +
Sbjct: 838 LITIDTAVLGSIDWA----CLVVDEAHRLKNNQSKFFRI 872
Score = 39 (18.8 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 908 TGRRSAKKKEMSKQERD 924
+ R SAKKK K ++D
Sbjct: 326 SSRSSAKKKPKKKTKKD 342
Score = 38 (18.4 bits), Expect = 3.2e-238, Sum P(6) = 3.2e-238
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 62 SSPKSPSQNLDFTSFLEVYH 81
S PKS SQ LD ++ H
Sbjct: 135 SEPKSSSQLLDTWGMEDIDH 154
>RGD|1582725 [details] [associations]
symbol:Chd5 "chromodomain helicase DNA binding protein 5"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1582725 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OrthoDB:EOG4WH8JX
IPI:IPI00948282 Ensembl:ENSRNOT00000067364 UCSC:RGD:1582725
ArrayExpress:D4A5U0 Uniprot:D4A5U0
Length = 1940
Score = 1452 (516.2 bits), Expect = 3.7e-237, Sum P(5) = 3.7e-237
Identities = 287/515 (55%), Positives = 353/515 (68%)
Query: 77 LEVYHPQLLKSYMKKMNNDFTXXXXXXXXXXXXXKRMARLNRHNINDEELEKKYYRYGIK 136
LE+YH + ++Y +K + D K R N+ + ++E+++YRYGIK
Sbjct: 529 LELYHTVMYRNYQRKNDMD-EPPPFDYGSGDEDGKSEKRKNKDPLY-AKMEERFYRYGIK 586
Query: 137 PEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNXXXXXX 196
PEW++ +R++N + G YL+KW+DLPYD+ TWE + DIP + Y
Sbjct: 587 PEWMMVHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDEIDIPYYDNLKQTYWGHRELM 646
Query: 197 XXXXXXXELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEG 256
+ + G K + PP+ P D K++KQP ++D TG LH YQLEG
Sbjct: 647 LGEDARLPKRLVKKGKK-LKDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEG 705
Query: 257 INWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWERE 316
+NWLR+SW Q DTILADEMGLGKT+QTI FLYSL+KEGH KGP+LVSAPLSTIINWERE
Sbjct: 706 LNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWERE 765
Query: 317 FETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPC-RIRSST-VKFHVLLTSYE 374
FE WAPDFYVVTY GDK+ R V+R+++ S+ED A RGGK R++ +KFHVLLTSYE
Sbjct: 766 FEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRGGKKVFRMKKEVQIKFHVLLTSYE 825
Query: 375 LITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXX 434
LIT D A+LGSIEWA LVVDEAHRLK+NQSKFF+ L+ Y I KLLLTGTP
Sbjct: 826 LITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELF 885
Query: 435 XXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFI 494
TPE+FN+L F EFADISKE+Q+K+LHDLLGPHMLRRLKADV KNMP+K+E I
Sbjct: 886 HLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELI 945
Query: 495 VRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAP 554
VRVELS MQKKYYK+ILTRNFEALN KGGG QVSLLNIMMDLKKCCNHPYLFP AA EAP
Sbjct: 946 VRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAP 1005
Query: 555 V-QGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
+ G Y+ +L +++G ++GHR
Sbjct: 1006 MLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHR 1040
Score = 437 (158.9 bits), Expect = 3.7e-237, Sum P(5) = 3.7e-237
Identities = 82/97 (84%), Positives = 88/97 (90%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MTKMLD+LED+L+ EGYKYERIDG ITG +RQE+IDRFNAPGA QF FLLSTR+GGL
Sbjct: 1044 FSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGL 1103
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ K
Sbjct: 1104 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKK 1140
Score = 418 (152.2 bits), Expect = 3.7e-235, Sum P(5) = 3.7e-235
Identities = 80/91 (87%), Positives = 84/91 (92%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ KVMIYRFVTR SVEER+TQVAKRKM
Sbjct: 1105 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKM 1164
Query: 802 MLTHLVVRPGMGGKQANFTKQELDDILRFGT 832
MLTHLVVRPG+G K + TKQELDDIL+FGT
Sbjct: 1165 MLTHLVVRPGLGSKSGSMTKQELDDILKFGT 1195
Score = 178 (67.7 bits), Expect = 3.7e-237, Sum P(5) = 3.7e-237
Identities = 37/45 (82%), Positives = 42/45 (93%)
Query: 939 EVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRL 983
+VLNQLEELLSDMK+DV+RLP+ L+RIPPVA RL MSERSILSRL
Sbjct: 1853 KVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRL 1897
Score = 172 (65.6 bits), Expect = 3.7e-237, Sum P(5) = 3.7e-237
Identities = 32/42 (76%), Positives = 36/42 (85%)
Query: 848 IIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQ 889
+IKQE EN DP YW KLLRHHYEQ QED++R LGKGKR+RKQ
Sbjct: 1306 VIKQE-ENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQ 1346
Score = 166 (63.5 bits), Expect = 4.7e-82, Sum P(6) = 4.7e-82
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 587 HRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIP 636
+RYGIKPEW++ +R++N + G YL+KW+DLPYD+ TWE + DIP
Sbjct: 581 YRYGIKPEWMMVHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDEIDIP 630
Score = 111 (44.1 bits), Expect = 3.7e-237, Sum P(5) = 3.7e-237
Identities = 22/34 (64%), Positives = 29/34 (85%)
Query: 908 TGRRSAKKKEMSKQERDRPLPPLLARVGGNIEVL 941
+GRR ++++ K +RD+PLPPLLARVGGNIEVL
Sbjct: 1389 SGRRQSRRQ--LKSDRDKPLPPLLARVGGNIEVL 1420
Score = 41 (19.5 bits), Expect = 4.7e-82, Sum P(6) = 4.7e-82
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 204 ELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQ 238
E +ED + S S+ Y+P +K L++K EK+
Sbjct: 76 ENEEDLEEKSESEGSDYSPTKKKKKK-LKEKKEKK 109
Score = 40 (19.1 bits), Expect = 6.0e-82, Sum P(6) = 6.0e-82
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 158 YLVKWRDLPYDKATWEDE 175
+ VKW L Y +W E
Sbjct: 509 FFVKWAGLSYWHCSWVKE 526
Score = 40 (19.1 bits), Expect = 6.1e-69, Sum P(6) = 6.1e-69
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 614 YLVKWRDLPYDKATWEDE 631
+ VKW L Y +W E
Sbjct: 509 FFVKWAGLSYWHCSWVKE 526
>UNIPROTKB|E2R1M3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:AAEX03003895 EMBL:AAEX03003896 EMBL:AAEX03003897
Ensembl:ENSCAFT00000031086 Uniprot:E2R1M3
Length = 1812
Score = 1449 (515.1 bits), Expect = 6.0e-237, Sum P(5) = 6.0e-237
Identities = 287/515 (55%), Positives = 353/515 (68%)
Query: 77 LEVYHPQLLKSYMKKMNNDFTXXXXXXXXXXXXXKRMARLNRHNINDEELEKKYYRYGIK 136
LE+YH + ++Y +K + D K R N+ + ++E+++YRYGIK
Sbjct: 394 LELYHTVMYRNYQRKNDMD-EPPPFDYGSGDEDGKSEKRKNKDPLY-AKMEERFYRYGIK 451
Query: 137 PEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNXXXXXX 196
PEW++ +R++N + G YL+KW+DLPYD+ TWE ++ DIP + Y
Sbjct: 452 PEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYDNLKQAYWGHRELM 511
Query: 197 XXXXXXXELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEG 256
+ + G K + PP+ P D K++KQP ++D TG LH YQLEG
Sbjct: 512 LGEDARLPKRLVKKGKK-LKDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEG 570
Query: 257 INWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWERE 316
+NWLR+SW Q DTILADEMGLGKT+QTI FLYSL+KEGH KGP+LVSAPLSTIINWERE
Sbjct: 571 LNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWERE 630
Query: 317 FETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPC-RIRSST-VKFHVLLTSYE 374
FE WAPDFYVVTY GDK+ R V+R+++ S+ED A R GK R++ +KFHVLLTSYE
Sbjct: 631 FEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYE 690
Query: 375 LITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXX 434
LIT D A+LGSIEWA LVVDEAHRLK+NQSKFF+ L+ Y I KLLLTGTP
Sbjct: 691 LITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELF 750
Query: 435 XXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFI 494
TPE+FN+L F EFADISKE+Q+K+LHDLLGPHMLRRLKADV KNMP+K+E I
Sbjct: 751 HLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELI 810
Query: 495 VRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAP 554
VRVELS MQKKYYK+ILTRNFEALN KGGG QVSLLNIMMDLKKCCNHPYLFP AA EAP
Sbjct: 811 VRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAP 870
Query: 555 V-QGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
V G Y+ +L +++G ++GHR
Sbjct: 871 VLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHR 905
Score = 437 (158.9 bits), Expect = 6.0e-237, Sum P(5) = 6.0e-237
Identities = 82/97 (84%), Positives = 88/97 (90%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MTKMLD+LED+L+ EGYKYERIDG ITG +RQE+IDRFNAPGA QF FLLSTR+GGL
Sbjct: 909 FSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGL 968
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ K
Sbjct: 969 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKK 1005
Score = 418 (152.2 bits), Expect = 6.0e-235, Sum P(5) = 6.0e-235
Identities = 80/91 (87%), Positives = 84/91 (92%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ KVMIYRFVTR SVEER+TQVAKRKM
Sbjct: 970 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKM 1029
Query: 802 MLTHLVVRPGMGGKQANFTKQELDDILRFGT 832
MLTHLVVRPG+G K + TKQELDDIL+FGT
Sbjct: 1030 MLTHLVVRPGLGSKSGSMTKQELDDILKFGT 1060
Score = 178 (67.7 bits), Expect = 6.0e-237, Sum P(5) = 6.0e-237
Identities = 37/45 (82%), Positives = 42/45 (93%)
Query: 939 EVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRL 983
+VLNQLEELLSDMK+DV+RLP+ L+RIPPVA RL MSERSILSRL
Sbjct: 1717 KVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRL 1761
Score = 173 (66.0 bits), Expect = 6.0e-237, Sum P(5) = 6.0e-237
Identities = 33/42 (78%), Positives = 36/42 (85%)
Query: 848 IIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQ 889
IIKQE EN DP YW KLLRHHYEQ QED++R LGKGKR+RKQ
Sbjct: 1171 IIKQE-ENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQ 1211
Score = 166 (63.5 bits), Expect = 2.6e-82, Sum P(6) = 2.6e-82
Identities = 26/50 (52%), Positives = 38/50 (76%)
Query: 587 HRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIP 636
+RYGIKPEW++ +R++N + G YL+KW+DLPYD+ TWE ++ DIP
Sbjct: 446 YRYGIKPEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIP 495
Score = 111 (44.1 bits), Expect = 6.0e-237, Sum P(5) = 6.0e-237
Identities = 22/34 (64%), Positives = 29/34 (85%)
Query: 908 TGRRSAKKKEMSKQERDRPLPPLLARVGGNIEVL 941
+GRR ++++ K +RD+PLPPLLARVGGNIEVL
Sbjct: 1254 SGRRQSRRQ--LKSDRDKPLPPLLARVGGNIEVL 1285
Score = 40 (19.1 bits), Expect = 2.6e-82, Sum P(6) = 2.6e-82
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 158 YLVKWRDLPYDKATWEDE 175
+ VKW L Y +W E
Sbjct: 374 FFVKWAGLSYWHCSWVKE 391
Score = 40 (19.1 bits), Expect = 2.1e-69, Sum P(5) = 2.1e-69
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 614 YLVKWRDLPYDKATWEDE 631
+ VKW L Y +W E
Sbjct: 374 FFVKWAGLSYWHCSWVKE 391
>UNIPROTKB|E2RTI2 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:AAEX03003635
EMBL:AAEX03003636 Ensembl:ENSCAFT00000026729 Uniprot:E2RTI2
Length = 1998
Score = 1471 (522.9 bits), Expect = 9.3e-237, Sum P(4) = 9.3e-237
Identities = 300/524 (57%), Positives = 359/524 (68%)
Query: 77 LEVYHPQLLKSYMKKMNNDFTXXXXXXXXXXXXXKRMARLNRHNINDEELEKKYYRYGIK 136
LE++H + ++Y +K ND + + + + E+E+KYYR+GIK
Sbjct: 568 LEIFHLVMYRNYQRK--NDMDEPPPLDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIK 625
Query: 137 PEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNXXXXXX 196
PEW+ +R+IN + G+ YLVKWRDLPYD++TWE++ +IP ++ + Y
Sbjct: 626 PEWMTVHRIINHSVDKKGNYHYLVKWRDLPYDQSTWEEDEMNIPEYEDHKQSY------- 678
Query: 197 XXXXXXXELQEDEDGASGSKPRRYTP---------PPEKPTTDLRKKYEKQPPFLDDTGM 247
EL ED A +PR+Y PP PT D KYE QP F+ TG
Sbjct: 679 ---WRHRELIMGEDPA---QPRKYKKKKKELQGDGPPSSPTNDPTVKYETQPRFITATGG 732
Query: 248 QLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPL 307
LH YQLEG+NWLR+SW Q DTILADEMGLGKTIQTI FLYSL+KEGH KGPFLVSAPL
Sbjct: 733 TLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPL 792
Query: 308 STIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPC-RI-RSSTVK 365
STIINWEREF+ WAP FYVVTY GDKD R ++R+++ S+ED A +GGK ++ R + VK
Sbjct: 793 STIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQVK 852
Query: 366 FHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTP 425
FHVLLTSYELIT D A LGSI WA LVVDEAHRLK+NQSKFF+ L+GY I +KLLLTGTP
Sbjct: 853 FHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTP 912
Query: 426 XXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLK 485
TPE+FN+L F EFADISKE+Q+K+LHDLLGPHMLRRLKADV K
Sbjct: 913 LQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFK 972
Query: 486 NMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYL 545
NMP+K+E IVRVELSPMQKKYYKYILTRNFEALN +GGG QVSLLNIMMDLKKCCNHPYL
Sbjct: 973 NMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYL 1032
Query: 546 FPAAAEEAP-VQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
FP AA E+P + G YE AL +A+G E GHR
Sbjct: 1033 FPVAAMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQGHR 1076
Score = 443 (161.0 bits), Expect = 9.3e-237, Sum P(4) = 9.3e-237
Identities = 83/97 (85%), Positives = 90/97 (92%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MTKMLD+LED+LD EGYKYERIDG ITG++RQE+IDRFNAPGA QF FLLSTR+GGL
Sbjct: 1080 FSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGL 1139
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
GINLATADTVII+DSDWNPHNDIQAFSRAHRIGQ NK
Sbjct: 1140 GINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANK 1176
Score = 414 (150.8 bits), Expect = 1.1e-233, Sum P(4) = 1.1e-233
Identities = 79/91 (86%), Positives = 85/91 (93%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATADTVII+DSDWNPHNDIQAFSRAHRIGQ NKVMIYRFVTR SVEER+TQVAKRKM
Sbjct: 1141 INLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKM 1200
Query: 802 MLTHLVVRPGMGGKQANFTKQELDDILRFGT 832
MLTHLVVRPG+G K + +KQELDDIL+FGT
Sbjct: 1201 MLTHLVVRPGLGSKAGSMSKQELDDILKFGT 1231
Score = 236 (88.1 bits), Expect = 9.3e-237, Sum P(4) = 9.3e-237
Identities = 55/106 (51%), Positives = 63/106 (59%)
Query: 848 IIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQTXXXXXXXXXXXXXXXXL 907
IIKQE EN DP YW KLLRHHYEQ QED++R LGKGKRVRKQ
Sbjct: 1304 IIKQE-ENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRVRKQVNYNDAAQEDQDNQSEYS 1362
Query: 908 TG---------RRSAKKKEMSKQ---ERDRPLPPLLARVGGNIEVL 941
G R +++ +Q E+D+PLPPLLARVGGNIEVL
Sbjct: 1363 VGSEEEDEDFDERPEGRRQSKRQLRNEKDKPLPPLLARVGGNIEVL 1408
Score = 186 (70.5 bits), Expect = 9.3e-237, Sum P(4) = 9.3e-237
Identities = 38/45 (84%), Positives = 43/45 (95%)
Query: 939 EVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRL 983
+VLNQLEELLSDMK+DV+RLPATL+RIPP+A RL MSERSILSRL
Sbjct: 1861 KVLNQLEELLSDMKADVTRLPATLSRIPPIAARLQMSERSILSRL 1905
Score = 180 (68.4 bits), Expect = 6.7e-81, Sum P(5) = 6.7e-81
Identities = 34/84 (40%), Positives = 53/84 (63%)
Query: 584 EDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIE 643
E +R+GIKPEW+ +R+IN + G+ YLVKWRDLPYD++TWE++ +IP ++ +
Sbjct: 617 EKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVKWRDLPYDQSTWEEDEMNIPEYEDHKQ 676
Query: 644 FYNMTKMLDILEDYLDGEGYKYER 667
Y + L + ED YK ++
Sbjct: 677 SYWRHRELIMGEDPAQPRKYKKKK 700
Score = 41 (19.5 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 204 ELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPP 240
+L + ED G + R PP ++P + R++ + + P
Sbjct: 1668 DLGKRED-VKGDRELRPGPPRDEPRPNGRREEKAEKP 1703
Score = 39 (18.8 bits), Expect = 6.7e-81, Sum P(5) = 6.7e-81
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 158 YLVKWRDLPYDKATWEDE 175
+ VKW L Y +W E
Sbjct: 548 FFVKWVGLSYWHCSWAKE 565
Score = 39 (18.8 bits), Expect = 4.1e-70, Sum P(4) = 4.1e-70
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 614 YLVKWRDLPYDKATWEDE 631
+ VKW L Y +W E
Sbjct: 548 FFVKWVGLSYWHCSWAKE 565
>UNIPROTKB|Q12873 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0004386 "helicase activity" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007051 "spindle organization" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0051297 "centrosome organization" evidence=IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=TAS] [GO:0016581 "NuRD complex" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
EMBL:CH471108 GO:GO:0005730 GO:GO:0051297 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006357 GO:GO:0006351
GO:GO:0016568 Gene3D:1.10.30.10 GO:GO:0045111 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003
InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007051 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 EMBL:U91543 EMBL:AF006515 EMBL:U08379 IPI:IPI00373870
IPI:IPI00411592 RefSeq:NP_001005271.2 RefSeq:NP_001005273.1
RefSeq:NP_005843.2 UniGene:Hs.25601 ProteinModelPortal:Q12873
SMR:Q12873 DIP:DIP-32496N IntAct:Q12873 MINT:MINT-1185641
STRING:Q12873 PhosphoSite:Q12873 DMDM:88911273 PaxDb:Q12873
PRIDE:Q12873 Ensembl:ENST00000330494 Ensembl:ENST00000358181
GeneID:1107 KEGG:hsa:1107 UCSC:uc002gje.2 UCSC:uc002gjf.2
GeneCards:GC17P007788 H-InvDB:HIX0013516 HGNC:HGNC:1918
HPA:HPA043368 MIM:602120 neXtProt:NX_Q12873 PharmGKB:PA26454
HOVERGEN:HBG005326 KO:K11642 PhylomeDB:Q12873 ChiTaRS:CHD3
GenomeRNAi:1107 NextBio:4590 ArrayExpress:Q12873 Bgee:Q12873
CleanEx:HS_CHD3 Genevestigator:Q12873 GermOnline:ENSG00000170004
Uniprot:Q12873
Length = 2000
Score = 1471 (522.9 bits), Expect = 9.3e-237, Sum P(4) = 9.3e-237
Identities = 300/524 (57%), Positives = 359/524 (68%)
Query: 77 LEVYHPQLLKSYMKKMNNDFTXXXXXXXXXXXXXKRMARLNRHNINDEELEKKYYRYGIK 136
LE++H + ++Y +K ND + + + + E+E+KYYR+GIK
Sbjct: 570 LEIFHLVMYRNYQRK--NDMDEPPPLDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIK 627
Query: 137 PEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNXXXXXX 196
PEW+ +R+IN + G+ YLVKWRDLPYD++TWE++ +IP +E + Y
Sbjct: 628 PEWMTVHRIINHSVDKKGNYHYLVKWRDLPYDQSTWEEDEMNIPEYEEHKQSY------- 680
Query: 197 XXXXXXXELQEDEDGASGSKPRRYTP---------PPEKPTTDLRKKYEKQPPFLDDTGM 247
EL ED A +PR+Y PP PT D KYE QP F+ TG
Sbjct: 681 ---WRHRELIMGEDPA---QPRKYKKKKKELQGDGPPSSPTNDPTVKYETQPRFITATGG 734
Query: 248 QLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPL 307
LH YQLEG+NWLR+SW Q DTILADEMGLGKTIQTI FLYSL+KEGH KGPFLVSAPL
Sbjct: 735 TLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPL 794
Query: 308 STIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPC-RI-RSSTVK 365
STIINWEREF+ WAP FYVVTY GDKD R ++R+++ S+ED A +GGK ++ R + VK
Sbjct: 795 STIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQVK 854
Query: 366 FHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTP 425
FHVLLTSYELIT D A LGSI WA LVVDEAHRLK+NQSKFF+ L+GY I +KLLLTGTP
Sbjct: 855 FHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTP 914
Query: 426 XXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLK 485
TPE+FN+L F EFADISKE+Q+K+LHDLLGPHMLRRLKADV K
Sbjct: 915 LQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFK 974
Query: 486 NMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYL 545
NMP+K+E IVRVELSPMQKKYYKYILTRNFEALN +GGG QVSLLNIMMDLKKCCNHPYL
Sbjct: 975 NMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYL 1034
Query: 546 FPAAAEEAP-VQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
FP AA E+P + G YE AL +++G E GHR
Sbjct: 1035 FPVAAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHR 1078
Score = 443 (161.0 bits), Expect = 9.3e-237, Sum P(4) = 9.3e-237
Identities = 83/97 (85%), Positives = 90/97 (92%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MTKMLD+LED+LD EGYKYERIDG ITG++RQE+IDRFNAPGA QF FLLSTR+GGL
Sbjct: 1082 FSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGL 1141
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
GINLATADTVII+DSDWNPHNDIQAFSRAHRIGQ NK
Sbjct: 1142 GINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANK 1178
Score = 414 (150.8 bits), Expect = 1.1e-233, Sum P(4) = 1.1e-233
Identities = 79/91 (86%), Positives = 85/91 (93%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATADTVII+DSDWNPHNDIQAFSRAHRIGQ NKVMIYRFVTR SVEER+TQVAKRKM
Sbjct: 1143 INLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKM 1202
Query: 802 MLTHLVVRPGMGGKQANFTKQELDDILRFGT 832
MLTHLVVRPG+G K + +KQELDDIL+FGT
Sbjct: 1203 MLTHLVVRPGLGSKAGSMSKQELDDILKFGT 1233
Score = 236 (88.1 bits), Expect = 9.3e-237, Sum P(4) = 9.3e-237
Identities = 55/106 (51%), Positives = 63/106 (59%)
Query: 848 IIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQTXXXXXXXXXXXXXXXXL 907
IIKQE EN DP YW KLLRHHYEQ QED++R LGKGKRVRKQ
Sbjct: 1306 IIKQE-ENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRVRKQVNYNDAAQEDQDNQSEYS 1364
Query: 908 TG---------RRSAKKKEMSKQ---ERDRPLPPLLARVGGNIEVL 941
G R +++ +Q E+D+PLPPLLARVGGNIEVL
Sbjct: 1365 VGSEEEDEDFDERPEGRRQSKRQLRNEKDKPLPPLLARVGGNIEVL 1410
Score = 186 (70.5 bits), Expect = 9.3e-237, Sum P(4) = 9.3e-237
Identities = 38/45 (84%), Positives = 43/45 (95%)
Query: 939 EVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRL 983
+VLNQLEELLSDMK+DV+RLPATL+RIPP+A RL MSERSILSRL
Sbjct: 1863 KVLNQLEELLSDMKADVTRLPATLSRIPPIAARLQMSERSILSRL 1907
Score = 183 (69.5 bits), Expect = 3.3e-81, Sum P(5) = 3.3e-81
Identities = 35/84 (41%), Positives = 53/84 (63%)
Query: 584 EDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIE 643
E +R+GIKPEW+ +R+IN + G+ YLVKWRDLPYD++TWE++ +IP +E +
Sbjct: 619 EKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVKWRDLPYDQSTWEEDEMNIPEYEEHKQ 678
Query: 644 FYNMTKMLDILEDYLDGEGYKYER 667
Y + L + ED YK ++
Sbjct: 679 SYWRHRELIMGEDPAQPRKYKKKK 702
Score = 39 (18.8 bits), Expect = 3.3e-81, Sum P(5) = 3.3e-81
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 158 YLVKWRDLPYDKATWEDE 175
+ VKW L Y +W E
Sbjct: 550 FFVKWVGLSYWHCSWAKE 567
Score = 39 (18.8 bits), Expect = 4.1e-70, Sum P(4) = 4.1e-70
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 614 YLVKWRDLPYDKATWEDE 631
+ VKW L Y +W E
Sbjct: 550 FFVKWVGLSYWHCSWAKE 567
>UNIPROTKB|F1ST12 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 CTD:1107 KO:K11642 OMA:EPEPGYR
EMBL:CU972380 RefSeq:XP_003132000.1 UniGene:Ssc.1663
Ensembl:ENSSSCT00000019548 GeneID:100188906 KEGG:ssc:100188906
Uniprot:F1ST12
Length = 2002
Score = 1471 (522.9 bits), Expect = 9.3e-237, Sum P(4) = 9.3e-237
Identities = 300/524 (57%), Positives = 359/524 (68%)
Query: 77 LEVYHPQLLKSYMKKMNNDFTXXXXXXXXXXXXXKRMARLNRHNINDEELEKKYYRYGIK 136
LE++H + ++Y +K ND + + + + E+E+KYYR+GIK
Sbjct: 570 LEIFHLVMYRNYQRK--NDMDEPPPLDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIK 627
Query: 137 PEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNXXXXXX 196
PEW+ +R+IN + G+ YLVKWRDLPYD++TWE++ +IP ++ + Y
Sbjct: 628 PEWMTVHRIINHSVDKKGNYHYLVKWRDLPYDQSTWEEDEMNIPEYEDHKQSY------- 680
Query: 197 XXXXXXXELQEDEDGASGSKPRRYTP---------PPEKPTTDLRKKYEKQPPFLDDTGM 247
EL ED A +PR+Y PP PT D KYE QP F+ TG
Sbjct: 681 ---WRHRELIMGEDPA---QPRKYKKKKKELQGDGPPSSPTNDPTVKYETQPRFITATGG 734
Query: 248 QLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPL 307
LH YQLEG+NWLR+SW Q DTILADEMGLGKTIQTI FLYSL+KEGH KGPFLVSAPL
Sbjct: 735 TLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPL 794
Query: 308 STIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPC-RI-RSSTVK 365
STIINWEREF+ WAP FYVVTY GDKD R ++R+++ S+ED A +GGK ++ R + VK
Sbjct: 795 STIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQVK 854
Query: 366 FHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTP 425
FHVLLTSYELIT D A LGSI WA LVVDEAHRLK+NQSKFF+ L+GY I +KLLLTGTP
Sbjct: 855 FHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTP 914
Query: 426 XXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLK 485
TPE+FN+L F EFADISKE+Q+K+LHDLLGPHMLRRLKADV K
Sbjct: 915 LQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFK 974
Query: 486 NMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYL 545
NMP+K+E IVRVELSPMQKKYYKYILTRNFEALN +GGG QVSLLNIMMDLKKCCNHPYL
Sbjct: 975 NMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYL 1034
Query: 546 FPAAAEEAP-VQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
FP AA E+P + G YE AL +A+G E GHR
Sbjct: 1035 FPVAAMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQGHR 1078
Score = 443 (161.0 bits), Expect = 9.3e-237, Sum P(4) = 9.3e-237
Identities = 83/97 (85%), Positives = 90/97 (92%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MTKMLD+LED+LD EGYKYERIDG ITG++RQE+IDRFNAPGA QF FLLSTR+GGL
Sbjct: 1082 FSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGL 1141
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
GINLATADTVII+DSDWNPHNDIQAFSRAHRIGQ NK
Sbjct: 1142 GINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANK 1178
Score = 414 (150.8 bits), Expect = 1.1e-233, Sum P(4) = 1.1e-233
Identities = 79/91 (86%), Positives = 85/91 (93%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATADTVII+DSDWNPHNDIQAFSRAHRIGQ NKVMIYRFVTR SVEER+TQVAKRKM
Sbjct: 1143 INLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKM 1202
Query: 802 MLTHLVVRPGMGGKQANFTKQELDDILRFGT 832
MLTHLVVRPG+G K + +KQELDDIL+FGT
Sbjct: 1203 MLTHLVVRPGLGSKAGSMSKQELDDILKFGT 1233
Score = 236 (88.1 bits), Expect = 9.3e-237, Sum P(4) = 9.3e-237
Identities = 55/106 (51%), Positives = 63/106 (59%)
Query: 848 IIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQTXXXXXXXXXXXXXXXXL 907
IIKQE EN DP YW KLLRHHYEQ QED++R LGKGKRVRKQ
Sbjct: 1306 IIKQE-ENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRVRKQVNYNDAAQEDQDNQSEYS 1364
Query: 908 TG---------RRSAKKKEMSKQ---ERDRPLPPLLARVGGNIEVL 941
G R +++ +Q E+D+PLPPLLARVGGNIEVL
Sbjct: 1365 VGSEEEDEDFDERPEGRRQSKRQLRNEKDKPLPPLLARVGGNIEVL 1410
Score = 186 (70.5 bits), Expect = 9.3e-237, Sum P(4) = 9.3e-237
Identities = 38/45 (84%), Positives = 43/45 (95%)
Query: 939 EVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRL 983
+VLNQLEELLSDMK+DV+RLPATL+RIPP+A RL MSERSILSRL
Sbjct: 1865 KVLNQLEELLSDMKADVTRLPATLSRIPPIAARLQMSERSILSRL 1909
Score = 180 (68.4 bits), Expect = 6.8e-81, Sum P(5) = 6.8e-81
Identities = 34/84 (40%), Positives = 53/84 (63%)
Query: 584 EDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIE 643
E +R+GIKPEW+ +R+IN + G+ YLVKWRDLPYD++TWE++ +IP ++ +
Sbjct: 619 EKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVKWRDLPYDQSTWEEDEMNIPEYEDHKQ 678
Query: 644 FYNMTKMLDILEDYLDGEGYKYER 667
Y + L + ED YK ++
Sbjct: 679 SYWRHRELIMGEDPAQPRKYKKKK 702
Score = 39 (18.8 bits), Expect = 6.8e-81, Sum P(5) = 6.8e-81
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 158 YLVKWRDLPYDKATWEDE 175
+ VKW L Y +W E
Sbjct: 550 FFVKWVGLSYWHCSWAKE 567
Score = 39 (18.8 bits), Expect = 4.1e-70, Sum P(4) = 4.1e-70
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 614 YLVKWRDLPYDKATWEDE 631
+ VKW L Y +W E
Sbjct: 550 FFVKWVGLSYWHCSWAKE 567
>UNIPROTKB|Q8TDI0 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
EMBL:AF425231 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 OrthoDB:EOG4WH8JX
EMBL:AL035406 EMBL:AL117491 EMBL:AB007913 IPI:IPI00152535
PIR:T17269 RefSeq:NP_056372.1 UniGene:Hs.522898
ProteinModelPortal:Q8TDI0 SMR:Q8TDI0 IntAct:Q8TDI0 STRING:Q8TDI0
PhosphoSite:Q8TDI0 DMDM:51701343 PaxDb:Q8TDI0 PRIDE:Q8TDI0
DNASU:26038 Ensembl:ENST00000262450 GeneID:26038 KEGG:hsa:26038
UCSC:uc001amb.2 CTD:26038 GeneCards:GC01M006096 HGNC:HGNC:16816
HPA:HPA015809 MIM:610771 neXtProt:NX_Q8TDI0 PharmGKB:PA134969178
InParanoid:Q8TDI0 KO:K14435 OMA:KRIDDGD PhylomeDB:Q8TDI0
ChiTaRS:CHD5 GenomeRNAi:26038 NextBio:47863 ArrayExpress:Q8TDI0
Bgee:Q8TDI0 CleanEx:HS_CHD5 Genevestigator:Q8TDI0
GermOnline:ENSG00000116254 Uniprot:Q8TDI0
Length = 1954
Score = 1447 (514.4 bits), Expect = 9.8e-237, Sum P(5) = 9.8e-237
Identities = 290/520 (55%), Positives = 358/520 (68%)
Query: 77 LEVYHPQLLKSYMKKMNNDFTXXXXXXXXXXXXXKRMARLNRHNINDEELEKKYYRYGIK 136
LE+YH + ++Y +K + D K R N+ + ++E+++YRYGIK
Sbjct: 531 LELYHTVMYRNYQRKNDMD-EPPPFDYGSGDEDGKSEKRKNKDPLY-AKMEERFYRYGIK 588
Query: 137 PEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIP---GLKESIEFYNXXX 193
PEW++ +R++N + G YL+KW+DLPYD+ TWE ++ DIP LK++ +
Sbjct: 589 PEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYDNLKQAYWGHRELM 648
Query: 194 XXXXXXXXXXELQEDEDGASGSKPR--RYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHA 251
L++ G K R + PP+ P D K++KQP ++D TG LH
Sbjct: 649 LGEDTRLPKRLLKK------GKKLRDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHP 702
Query: 252 YQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTII 311
YQLEG+NWLR+SW Q DTILADEMGLGKT+QTI FLYSL+KEGH KGP+LVSAPLSTII
Sbjct: 703 YQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTII 762
Query: 312 NWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPC-RIRSST-VKFHVL 369
NWEREFE WAPDFYVVTY GDK+ R V+R+++ S+ED A R GK R++ +KFHVL
Sbjct: 763 NWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVL 822
Query: 370 LTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXX 429
LTSYELIT D A+LGSIEWA LVVDEAHRLK+NQSKFF+ L+ Y I KLLLTGTP
Sbjct: 823 LTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNN 882
Query: 430 XXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPS 489
TPE+FN+L F EFADISKE+Q+K+LHDLLGPHMLRRLKADV KNMP+
Sbjct: 883 LEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPA 942
Query: 490 KSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAA 549
K+E IVRVELS MQKKYYK+ILTRNFEALN KGGG QVSLLNIMMDLKKCCNHPYLFP A
Sbjct: 943 KTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVA 1002
Query: 550 AEEAPV-QGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
A EAPV G Y+ +L +++G ++GHR
Sbjct: 1003 AVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHR 1042
Score = 437 (158.9 bits), Expect = 9.8e-237, Sum P(5) = 9.8e-237
Identities = 82/97 (84%), Positives = 88/97 (90%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MTKMLD+LED+L+ EGYKYERIDG ITG +RQE+IDRFNAPGA QF FLLSTR+GGL
Sbjct: 1046 FSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGL 1105
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ K
Sbjct: 1106 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKK 1142
Score = 418 (152.2 bits), Expect = 9.8e-235, Sum P(5) = 9.8e-235
Identities = 80/91 (87%), Positives = 84/91 (92%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ KVMIYRFVTR SVEER+TQVAKRKM
Sbjct: 1107 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKM 1166
Query: 802 MLTHLVVRPGMGGKQANFTKQELDDILRFGT 832
MLTHLVVRPG+G K + TKQELDDIL+FGT
Sbjct: 1167 MLTHLVVRPGLGSKSGSMTKQELDDILKFGT 1197
Score = 178 (67.7 bits), Expect = 9.8e-237, Sum P(5) = 9.8e-237
Identities = 37/45 (82%), Positives = 42/45 (93%)
Query: 939 EVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRL 983
+VLNQLEELLSDMK+DV+RLP+ L+RIPPVA RL MSERSILSRL
Sbjct: 1859 KVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRL 1903
Score = 173 (66.0 bits), Expect = 9.8e-237, Sum P(5) = 9.8e-237
Identities = 33/42 (78%), Positives = 36/42 (85%)
Query: 848 IIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQ 889
IIKQE EN DP YW KLLRHHYEQ QED++R LGKGKR+RKQ
Sbjct: 1308 IIKQE-ENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQ 1348
Score = 166 (63.5 bits), Expect = 5.0e-82, Sum P(6) = 5.0e-82
Identities = 26/50 (52%), Positives = 38/50 (76%)
Query: 587 HRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIP 636
+RYGIKPEW++ +R++N + G YL+KW+DLPYD+ TWE ++ DIP
Sbjct: 583 YRYGIKPEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIP 632
Score = 111 (44.1 bits), Expect = 9.8e-237, Sum P(5) = 9.8e-237
Identities = 22/34 (64%), Positives = 29/34 (85%)
Query: 908 TGRRSAKKKEMSKQERDRPLPPLLARVGGNIEVL 941
+GRR ++++ K +RD+PLPPLLARVGGNIEVL
Sbjct: 1391 SGRRQSRRQ--LKSDRDKPLPPLLARVGGNIEVL 1422
Score = 40 (19.1 bits), Expect = 5.0e-82, Sum P(6) = 5.0e-82
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 158 YLVKWRDLPYDKATWEDE 175
+ VKW L Y +W E
Sbjct: 511 FFVKWAGLSYWHCSWVKE 528
Score = 40 (19.1 bits), Expect = 1.0e-68, Sum P(6) = 1.0e-68
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 614 YLVKWRDLPYDKATWEDE 631
+ VKW L Y +W E
Sbjct: 511 FFVKWAGLSYWHCSWVKE 528
Score = 38 (18.4 bits), Expect = 8.1e-82, Sum P(6) = 8.1e-82
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 204 ELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQ 238
E +ED + S S+ Y+P +K L+ K EK+
Sbjct: 77 ENEEDLEEKSESEGSDYSPNKKKKKK-LKDKKEKK 110
>UNIPROTKB|F1N544 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:DAAA02048806
IPI:IPI00716282 Ensembl:ENSBTAT00000019119 ArrayExpress:F1N544
Uniprot:F1N544
Length = 1998
Score = 1471 (522.9 bits), Expect = 8.2e-236, Sum P(4) = 8.2e-236
Identities = 300/524 (57%), Positives = 359/524 (68%)
Query: 77 LEVYHPQLLKSYMKKMNNDFTXXXXXXXXXXXXXKRMARLNRHNINDEELEKKYYRYGIK 136
LE++H + ++Y +K ND + + + + E+E+KYYR+GIK
Sbjct: 566 LEIFHLVMYRNYQRK--NDMDEPPPLDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIK 623
Query: 137 PEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNXXXXXX 196
PEW+ +R+IN + G+ YLVKWRDLPYD++TWE++ +IP ++ + Y
Sbjct: 624 PEWMTVHRIINHSVDKKGNYHYLVKWRDLPYDQSTWEEDEMNIPEYEDHKQSY------- 676
Query: 197 XXXXXXXELQEDEDGASGSKPRRYTP---------PPEKPTTDLRKKYEKQPPFLDDTGM 247
EL ED A +PR+Y PP PT D KYE QP F+ TG
Sbjct: 677 ---WRHRELIMGEDPA---QPRKYKKKKKELQGDGPPSSPTNDPTVKYETQPRFITATGG 730
Query: 248 QLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPL 307
LH YQLEG+NWLR+SW Q DTILADEMGLGKTIQTI FLYSL+KEGH KGPFLVSAPL
Sbjct: 731 TLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPL 790
Query: 308 STIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPC-RI-RSSTVK 365
STIINWEREF+ WAP FYVVTY GDKD R ++R+++ S+ED A +GGK ++ R + VK
Sbjct: 791 STIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQVK 850
Query: 366 FHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTP 425
FHVLLTSYELIT D A LGSI WA LVVDEAHRLK+NQSKFF+ L+GY I +KLLLTGTP
Sbjct: 851 FHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTP 910
Query: 426 XXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLK 485
TPE+FN+L F EFADISKE+Q+K+LHDLLGPHMLRRLKADV K
Sbjct: 911 LQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFK 970
Query: 486 NMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYL 545
NMP+K+E IVRVELSPMQKKYYKYILTRNFEALN +GGG QVSLLNIMMDLKKCCNHPYL
Sbjct: 971 NMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYL 1030
Query: 546 FPAAAEEAP-VQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
FP AA E+P + G YE AL +A+G E GHR
Sbjct: 1031 FPVAAMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQGHR 1074
Score = 434 (157.8 bits), Expect = 8.2e-236, Sum P(4) = 8.2e-236
Identities = 82/97 (84%), Positives = 89/97 (91%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MTKMLD+LED+LD EGYKYERIDG ITG++RQE+IDRFNA GA QF FLLSTR+GGL
Sbjct: 1078 FSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAHGAQQFCFLLSTRAGGL 1137
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
GINLATADTVII+DSDWNPHNDIQAFSRAHRIGQ NK
Sbjct: 1138 GINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANK 1174
Score = 415 (151.1 bits), Expect = 8.3e-234, Sum P(4) = 8.3e-234
Identities = 85/114 (74%), Positives = 93/114 (81%)
Query: 720 WNPHNDIQ-AFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKV 778
+N H Q F + R G INLATADTVII+DSDWNPHNDIQAFSRAHRIGQ NKV
Sbjct: 1118 FNAHGAQQFCFLLSTRAGGLG--INLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKV 1175
Query: 779 MIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQANFTKQELDDILRFGT 832
MIYRFVTR SVEER+TQVAKRKMMLTHLVVRPG+G K + +KQELDDIL+FGT
Sbjct: 1176 MIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGT 1229
Score = 236 (88.1 bits), Expect = 8.2e-236, Sum P(4) = 8.2e-236
Identities = 55/106 (51%), Positives = 63/106 (59%)
Query: 848 IIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQTXXXXXXXXXXXXXXXXL 907
IIKQE EN DP YW KLLRHHYEQ QED++R LGKGKRVRKQ
Sbjct: 1302 IIKQE-ENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRVRKQVNYNDAAQEDQDNQSEYS 1360
Query: 908 TG---------RRSAKKKEMSKQ---ERDRPLPPLLARVGGNIEVL 941
G R +++ +Q E+D+PLPPLLARVGGNIEVL
Sbjct: 1361 VGSEEEDEDFDERPEGRRQSKRQLRNEKDKPLPPLLARVGGNIEVL 1406
Score = 186 (70.5 bits), Expect = 8.2e-236, Sum P(4) = 8.2e-236
Identities = 38/45 (84%), Positives = 43/45 (95%)
Query: 939 EVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRL 983
+VLNQLEELLSDMK+DV+RLPATL+RIPP+A RL MSERSILSRL
Sbjct: 1861 KVLNQLEELLSDMKADVTRLPATLSRIPPIAARLQMSERSILSRL 1905
Score = 180 (68.4 bits), Expect = 5.2e-81, Sum P(5) = 5.2e-81
Identities = 34/84 (40%), Positives = 53/84 (63%)
Query: 584 EDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIE 643
E +R+GIKPEW+ +R+IN + G+ YLVKWRDLPYD++TWE++ +IP ++ +
Sbjct: 615 EKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVKWRDLPYDQSTWEEDEMNIPEYEDHKQ 674
Query: 644 FYNMTKMLDILEDYLDGEGYKYER 667
Y + L + ED YK ++
Sbjct: 675 SYWRHRELIMGEDPAQPRKYKKKK 698
Score = 42 (19.8 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 8/37 (21%), Positives = 20/37 (54%)
Query: 204 ELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPP 240
+L + + G + R PP ++P ++ R++ + + P
Sbjct: 1667 DLGKRAEDVKGDRELRSGPPRDEPRSNGRREEKAEKP 1703
Score = 39 (18.8 bits), Expect = 5.2e-81, Sum P(5) = 5.2e-81
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 158 YLVKWRDLPYDKATWEDE 175
+ VKW L Y +W E
Sbjct: 546 FFVKWVGLSYWHCSWAKE 563
Score = 39 (18.8 bits), Expect = 4.3e-69, Sum P(4) = 4.3e-69
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 614 YLVKWRDLPYDKATWEDE 631
+ VKW L Y +W E
Sbjct: 546 FFVKWVGLSYWHCSWAKE 563
>RGD|1311923 [details] [associations]
symbol:Chd3 "chromodomain helicase DNA binding protein 3"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005813 "centrosome" evidence=ISO]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISO]
[GO:0007051 "spindle organization" evidence=ISO] [GO:0016581 "NuRD
complex" evidence=ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=ISO] [GO:0051297 "centrosome organization"
evidence=ISO] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326
IPI:IPI00369880 EMBL:AY903245 EMBL:AY903246 UniGene:Rn.232095
STRING:Q2KML1 UCSC:RGD:1311923 Genevestigator:Q2KML1 Uniprot:Q2KML1
Length = 1925
Score = 1462 (519.7 bits), Expect = 8.2e-236, Sum P(4) = 8.2e-236
Identities = 298/524 (56%), Positives = 358/524 (68%)
Query: 77 LEVYHPQLLKSYMKKMNNDFTXXXXXXXXXXXXXKRMARLNRHNINDEELEKKYYRYGIK 136
LE++H + ++Y +K ND + + + + E+E+KYYR+GIK
Sbjct: 526 LEIFHLVMYRNYQRK--NDMDEPPPLDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIK 583
Query: 137 PEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNXXXXXX 196
PEW+ +R+IN + G+ YLVKW+DLPYD++TWE++ +IP + + Y
Sbjct: 584 PEWMTVHRIINHSMDKKGNYHYLVKWKDLPYDQSTWEEDEMNIPEYDDHKQSY------- 636
Query: 197 XXXXXXXELQEDEDGASGSKPRRYTP---------PPEKPTTDLRKKYEKQPPFLDDTGM 247
EL ED A +PR+Y PP PT D KYE QP F+ TG
Sbjct: 637 ---WRHRELIMGEDPA---QPRKYKKKKKEIQGDGPPSSPTNDPTVKYETQPRFITATGG 690
Query: 248 QLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPL 307
LH YQLEG+NWLR+SW Q DTILADEMGLGKTIQTI FLYSL+KEGH KGPFLVSAPL
Sbjct: 691 TLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPL 750
Query: 308 STIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPC-RI-RSSTVK 365
STIINWEREF+ WAP FYVVTY GDKD R ++R+++ S+ED A +GGK ++ R + VK
Sbjct: 751 STIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQVK 810
Query: 366 FHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTP 425
FHVLLTSYELIT D A LGSI WA LVVDEAHRLK+NQSKFF+ L+GY I +KLLLTGTP
Sbjct: 811 FHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTP 870
Query: 426 XXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLK 485
TPE+FN+L F EFADISKE+Q+K+LHDLLGPHMLRRLKADV K
Sbjct: 871 LQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFK 930
Query: 486 NMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYL 545
NMP+K+E IVRVELSPMQKKYYKYILTRNFEALN +GGG QVSLLNIMMDLKKCCNHPYL
Sbjct: 931 NMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYL 990
Query: 546 FPAAAEEAP-VQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
FP AA E+P + G YE AL +++G E GHR
Sbjct: 991 FPVAAMESPKLPSGAYEGGALIKSSGKLLLLQKMLRKLKEQGHR 1034
Score = 443 (161.0 bits), Expect = 8.2e-236, Sum P(4) = 8.2e-236
Identities = 83/97 (85%), Positives = 90/97 (92%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MTKMLD+LED+LD EGYKYERIDG ITG++RQE+IDRFNAPGA QF FLLSTR+GGL
Sbjct: 1038 FSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGL 1097
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
GINLATADTVII+DSDWNPHNDIQAFSRAHRIGQ NK
Sbjct: 1098 GINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANK 1134
Score = 414 (150.8 bits), Expect = 9.4e-233, Sum P(4) = 9.4e-233
Identities = 79/91 (86%), Positives = 85/91 (93%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATADTVII+DSDWNPHNDIQAFSRAHRIGQ NKVMIYRFVTR SVEER+TQVAKRKM
Sbjct: 1099 INLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKM 1158
Query: 802 MLTHLVVRPGMGGKQANFTKQELDDILRFGT 832
MLTHLVVRPG+G K + +KQELDDIL+FGT
Sbjct: 1159 MLTHLVVRPGLGSKAGSMSKQELDDILKFGT 1189
Score = 236 (88.1 bits), Expect = 8.2e-236, Sum P(4) = 8.2e-236
Identities = 55/106 (51%), Positives = 63/106 (59%)
Query: 848 IIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQTXXXXXXXXXXXXXXXXL 907
IIKQE EN DP YW KLLRHHYEQ QED++R LGKGKRVRKQ
Sbjct: 1262 IIKQE-ENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRVRKQVNYNDAAQEDQDNQSEYS 1320
Query: 908 TG---------RRSAKKKEMSKQ---ERDRPLPPLLARVGGNIEVL 941
G R +++ +Q E+D+PLPPLLARVGGNIEVL
Sbjct: 1321 VGSEEEDEDFDERPEGRRQSKRQLRNEKDKPLPPLLARVGGNIEVL 1366
Score = 186 (70.5 bits), Expect = 8.2e-236, Sum P(4) = 8.2e-236
Identities = 38/45 (84%), Positives = 43/45 (95%)
Query: 939 EVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRL 983
+VLNQLEELLSDMK+DV+RLPATL+RIPP+A RL MSERSILSRL
Sbjct: 1786 KVLNQLEELLSDMKADVTRLPATLSRIPPIAARLQMSERSILSRL 1830
Score = 174 (66.3 bits), Expect = 1.1e-80, Sum P(5) = 1.1e-80
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 584 EDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIE 643
E +R+GIKPEW+ +R+IN + G+ YLVKW+DLPYD++TWE++ +IP + +
Sbjct: 575 EKYYRFGIKPEWMTVHRIINHSMDKKGNYHYLVKWKDLPYDQSTWEEDEMNIPEYDDHKQ 634
Query: 644 FYNMTKMLDILEDYLDGEGYKYER 667
Y + L + ED YK ++
Sbjct: 635 SYWRHRELIMGEDPAQPRKYKKKK 658
Score = 42 (19.8 bits), Expect = 1.1e-80, Sum P(5) = 1.1e-80
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 144 RVINSKTLRDGSTIYLVKWRDLPYDKATWEDE 175
RV+ ++ R+ + VKW L Y +W E
Sbjct: 496 RVLQGRSERE----FFVKWVGLSYWHCSWAKE 523
Score = 42 (19.8 bits), Expect = 1.6e-70, Sum P(4) = 1.6e-70
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 600 RVINSKTLRDGSTIYLVKWRDLPYDKATWEDE 631
RV+ ++ R+ + VKW L Y +W E
Sbjct: 496 RVLQGRSERE----FFVKWVGLSYWHCSWAKE 523
Score = 38 (18.4 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 206 QEDEDGASGSKPRRYTPPPEKPTTDLRK--KYEKQPPFL 242
+E + + R PP ++P + R+ K EK P F+
Sbjct: 1594 REKSEDVKADRELRLGPPRDEPRPNGRREEKVEK-PRFM 1631
>UNIPROTKB|E9PG89 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006333 "chromatin assembly or
disassembly" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IDA] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005730 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 GO:GO:0045111
GO:GO:0006333 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 RefSeq:NP_001005271.2 UniGene:Hs.25601 GeneID:1107
KEGG:hsa:1107 HGNC:HGNC:1918 KO:K11642 ChiTaRS:CHD3 GenomeRNAi:1107
NextBio:4590 EMBL:AC104581 IPI:IPI00465222
ProteinModelPortal:E9PG89 SMR:E9PG89 PRIDE:E9PG89
Ensembl:ENST00000380358 UCSC:uc002gjd.2 OMA:EPEPGYR
ArrayExpress:E9PG89 Bgee:E9PG89 Uniprot:E9PG89
Length = 2059
Score = 1471 (522.9 bits), Expect = 1.2e-235, Sum P(4) = 1.2e-235
Identities = 300/524 (57%), Positives = 359/524 (68%)
Query: 77 LEVYHPQLLKSYMKKMNNDFTXXXXXXXXXXXXXKRMARLNRHNINDEELEKKYYRYGIK 136
LE++H + ++Y +K ND + + + + E+E+KYYR+GIK
Sbjct: 629 LEIFHLVMYRNYQRK--NDMDEPPPLDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIK 686
Query: 137 PEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNXXXXXX 196
PEW+ +R+IN + G+ YLVKWRDLPYD++TWE++ +IP +E + Y
Sbjct: 687 PEWMTVHRIINHSVDKKGNYHYLVKWRDLPYDQSTWEEDEMNIPEYEEHKQSY------- 739
Query: 197 XXXXXXXELQEDEDGASGSKPRRYTP---------PPEKPTTDLRKKYEKQPPFLDDTGM 247
EL ED A +PR+Y PP PT D KYE QP F+ TG
Sbjct: 740 ---WRHRELIMGEDPA---QPRKYKKKKKELQGDGPPSSPTNDPTVKYETQPRFITATGG 793
Query: 248 QLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPL 307
LH YQLEG+NWLR+SW Q DTILADEMGLGKTIQTI FLYSL+KEGH KGPFLVSAPL
Sbjct: 794 TLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPL 853
Query: 308 STIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPC-RI-RSSTVK 365
STIINWEREF+ WAP FYVVTY GDKD R ++R+++ S+ED A +GGK ++ R + VK
Sbjct: 854 STIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQVK 913
Query: 366 FHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTP 425
FHVLLTSYELIT D A LGSI WA LVVDEAHRLK+NQSKFF+ L+GY I +KLLLTGTP
Sbjct: 914 FHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTP 973
Query: 426 XXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLK 485
TPE+FN+L F EFADISKE+Q+K+LHDLLGPHMLRRLKADV K
Sbjct: 974 LQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFK 1033
Query: 486 NMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYL 545
NMP+K+E IVRVELSPMQKKYYKYILTRNFEALN +GGG QVSLLNIMMDLKKCCNHPYL
Sbjct: 1034 NMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYL 1093
Query: 546 FPAAAEEAP-VQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
FP AA E+P + G YE AL +++G E GHR
Sbjct: 1094 FPVAAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHR 1137
Score = 443 (161.0 bits), Expect = 1.2e-235, Sum P(4) = 1.2e-235
Identities = 83/97 (85%), Positives = 90/97 (92%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MTKMLD+LED+LD EGYKYERIDG ITG++RQE+IDRFNAPGA QF FLLSTR+GGL
Sbjct: 1141 FSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGL 1200
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
GINLATADTVII+DSDWNPHNDIQAFSRAHRIGQ NK
Sbjct: 1201 GINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANK 1237
Score = 414 (150.8 bits), Expect = 1.4e-232, Sum P(4) = 1.4e-232
Identities = 79/91 (86%), Positives = 85/91 (93%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATADTVII+DSDWNPHNDIQAFSRAHRIGQ NKVMIYRFVTR SVEER+TQVAKRKM
Sbjct: 1202 INLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKM 1261
Query: 802 MLTHLVVRPGMGGKQANFTKQELDDILRFGT 832
MLTHLVVRPG+G K + +KQELDDIL+FGT
Sbjct: 1262 MLTHLVVRPGLGSKAGSMSKQELDDILKFGT 1292
Score = 236 (88.1 bits), Expect = 1.2e-235, Sum P(4) = 1.2e-235
Identities = 55/106 (51%), Positives = 63/106 (59%)
Query: 848 IIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQTXXXXXXXXXXXXXXXXL 907
IIKQE EN DP YW KLLRHHYEQ QED++R LGKGKRVRKQ
Sbjct: 1365 IIKQE-ENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRVRKQVNYNDAAQEDQDNQSEYS 1423
Query: 908 TG---------RRSAKKKEMSKQ---ERDRPLPPLLARVGGNIEVL 941
G R +++ +Q E+D+PLPPLLARVGGNIEVL
Sbjct: 1424 VGSEEEDEDFDERPEGRRQSKRQLRNEKDKPLPPLLARVGGNIEVL 1469
Score = 186 (70.5 bits), Expect = 1.2e-235, Sum P(4) = 1.2e-235
Identities = 38/45 (84%), Positives = 43/45 (95%)
Query: 939 EVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRL 983
+VLNQLEELLSDMK+DV+RLPATL+RIPP+A RL MSERSILSRL
Sbjct: 1922 KVLNQLEELLSDMKADVTRLPATLSRIPPIAARLQMSERSILSRL 1966
Score = 183 (69.5 bits), Expect = 4.0e-81, Sum P(5) = 4.0e-81
Identities = 35/84 (41%), Positives = 53/84 (63%)
Query: 584 EDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIE 643
E +R+GIKPEW+ +R+IN + G+ YLVKWRDLPYD++TWE++ +IP +E +
Sbjct: 678 EKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVKWRDLPYDQSTWEEDEMNIPEYEEHKQ 737
Query: 644 FYNMTKMLDILEDYLDGEGYKYER 667
Y + L + ED YK ++
Sbjct: 738 SYWRHRELIMGEDPAQPRKYKKKK 761
Score = 39 (18.8 bits), Expect = 4.0e-81, Sum P(5) = 4.0e-81
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 158 YLVKWRDLPYDKATWEDE 175
+ VKW L Y +W E
Sbjct: 609 FFVKWVGLSYWHCSWAKE 626
Score = 39 (18.8 bits), Expect = 2.2e-69, Sum P(5) = 2.2e-69
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 614 YLVKWRDLPYDKATWEDE 631
+ VKW L Y +W E
Sbjct: 609 FFVKWVGLSYWHCSWAKE 626
Score = 38 (18.4 bits), Expect = 5.1e-81, Sum P(5) = 5.1e-81
Identities = 9/23 (39%), Positives = 9/23 (39%)
Query: 222 PPPEKPTTDLRKKYEKQPPFLDD 244
PPP P L PP DD
Sbjct: 74 PPPPPPPPPLPPPPPPPPPDKDD 96
>UNIPROTKB|F1LPP7 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 IPI:IPI00369880
Ensembl:ENSRNOT00000057060 Uniprot:F1LPP7
Length = 2020
Score = 1462 (519.7 bits), Expect = 1.4e-235, Sum P(4) = 1.4e-235
Identities = 298/524 (56%), Positives = 358/524 (68%)
Query: 77 LEVYHPQLLKSYMKKMNNDFTXXXXXXXXXXXXXKRMARLNRHNINDEELEKKYYRYGIK 136
LE++H + ++Y +K ND + + + + E+E+KYYR+GIK
Sbjct: 621 LEIFHLVMYRNYQRK--NDMDEPPPLDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIK 678
Query: 137 PEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNXXXXXX 196
PEW+ +R+IN + G+ YLVKW+DLPYD++TWE++ +IP + + Y
Sbjct: 679 PEWMTVHRIINHSMDKKGNYHYLVKWKDLPYDQSTWEEDEMNIPEYDDHKQSY------- 731
Query: 197 XXXXXXXELQEDEDGASGSKPRRYTP---------PPEKPTTDLRKKYEKQPPFLDDTGM 247
EL ED A +PR+Y PP PT D KYE QP F+ TG
Sbjct: 732 ---WRHRELIMGEDPA---QPRKYKKKKKEIQGDGPPSSPTNDPTVKYETQPRFITATGG 785
Query: 248 QLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPL 307
LH YQLEG+NWLR+SW Q DTILADEMGLGKTIQTI FLYSL+KEGH KGPFLVSAPL
Sbjct: 786 TLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPL 845
Query: 308 STIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPC-RI-RSSTVK 365
STIINWEREF+ WAP FYVVTY GDKD R ++R+++ S+ED A +GGK ++ R + VK
Sbjct: 846 STIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQVK 905
Query: 366 FHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTP 425
FHVLLTSYELIT D A LGSI WA LVVDEAHRLK+NQSKFF+ L+GY I +KLLLTGTP
Sbjct: 906 FHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTP 965
Query: 426 XXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLK 485
TPE+FN+L F EFADISKE+Q+K+LHDLLGPHMLRRLKADV K
Sbjct: 966 LQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFK 1025
Query: 486 NMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYL 545
NMP+K+E IVRVELSPMQKKYYKYILTRNFEALN +GGG QVSLLNIMMDLKKCCNHPYL
Sbjct: 1026 NMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYL 1085
Query: 546 FPAAAEEAP-VQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
FP AA E+P + G YE AL +++G E GHR
Sbjct: 1086 FPVAAMESPKLPSGAYEGGALIKSSGKLLLLQKMLRKLKEQGHR 1129
Score = 443 (161.0 bits), Expect = 1.4e-235, Sum P(4) = 1.4e-235
Identities = 83/97 (85%), Positives = 90/97 (92%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MTKMLD+LED+LD EGYKYERIDG ITG++RQE+IDRFNAPGA QF FLLSTR+GGL
Sbjct: 1133 FSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGL 1192
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
GINLATADTVII+DSDWNPHNDIQAFSRAHRIGQ NK
Sbjct: 1193 GINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANK 1229
Score = 414 (150.8 bits), Expect = 1.6e-232, Sum P(4) = 1.6e-232
Identities = 79/91 (86%), Positives = 85/91 (93%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATADTVII+DSDWNPHNDIQAFSRAHRIGQ NKVMIYRFVTR SVEER+TQVAKRKM
Sbjct: 1194 INLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKM 1253
Query: 802 MLTHLVVRPGMGGKQANFTKQELDDILRFGT 832
MLTHLVVRPG+G K + +KQELDDIL+FGT
Sbjct: 1254 MLTHLVVRPGLGSKAGSMSKQELDDILKFGT 1284
Score = 236 (88.1 bits), Expect = 1.4e-235, Sum P(4) = 1.4e-235
Identities = 55/106 (51%), Positives = 63/106 (59%)
Query: 848 IIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQTXXXXXXXXXXXXXXXXL 907
IIKQE EN DP YW KLLRHHYEQ QED++R LGKGKRVRKQ
Sbjct: 1357 IIKQE-ENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRVRKQVNYNDAAQEDQDNQSEYS 1415
Query: 908 TG---------RRSAKKKEMSKQ---ERDRPLPPLLARVGGNIEVL 941
G R +++ +Q E+D+PLPPLLARVGGNIEVL
Sbjct: 1416 VGSEEEDEDFDERPEGRRQSKRQLRNEKDKPLPPLLARVGGNIEVL 1461
Score = 186 (70.5 bits), Expect = 1.4e-235, Sum P(4) = 1.4e-235
Identities = 38/45 (84%), Positives = 43/45 (95%)
Query: 939 EVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRL 983
+VLNQLEELLSDMK+DV+RLPATL+RIPP+A RL MSERSILSRL
Sbjct: 1881 KVLNQLEELLSDMKADVTRLPATLSRIPPIAARLQMSERSILSRL 1925
Score = 174 (66.3 bits), Expect = 1.5e-80, Sum P(5) = 1.5e-80
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 584 EDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIE 643
E +R+GIKPEW+ +R+IN + G+ YLVKW+DLPYD++TWE++ +IP + +
Sbjct: 670 EKYYRFGIKPEWMTVHRIINHSMDKKGNYHYLVKWKDLPYDQSTWEEDEMNIPEYDDHKQ 729
Query: 644 FYNMTKMLDILEDYLDGEGYKYER 667
Y + L + ED YK ++
Sbjct: 730 SYWRHRELIMGEDPAQPRKYKKKK 753
Score = 42 (19.8 bits), Expect = 1.5e-80, Sum P(5) = 1.5e-80
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 144 RVINSKTLRDGSTIYLVKWRDLPYDKATWEDE 175
RV+ ++ R+ + VKW L Y +W E
Sbjct: 591 RVLQGRSERE----FFVKWVGLSYWHCSWAKE 618
Score = 42 (19.8 bits), Expect = 2.1e-70, Sum P(4) = 2.1e-70
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 600 RVINSKTLRDGSTIYLVKWRDLPYDKATWEDE 631
RV+ ++ R+ + VKW L Y +W E
Sbjct: 591 RVLQGRSERE----FFVKWVGLSYWHCSWAKE 618
Score = 38 (18.4 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 206 QEDEDGASGSKPRRYTPPPEKPTTDLRK--KYEKQPPFL 242
+E + + R PP ++P + R+ K EK P F+
Sbjct: 1689 REKSEDVKADRELRLGPPRDEPRPNGRREEKVEK-PRFM 1726
>UNIPROTKB|F1M7Q0 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR
IPI:IPI00959834 Ensembl:ENSRNOT00000012983 Uniprot:F1M7Q0
Length = 2054
Score = 1462 (519.7 bits), Expect = 1.8e-234, Sum P(4) = 1.8e-234
Identities = 298/524 (56%), Positives = 358/524 (68%)
Query: 77 LEVYHPQLLKSYMKKMNNDFTXXXXXXXXXXXXXKRMARLNRHNINDEELEKKYYRYGIK 136
LE++H + ++Y +K ND + + + + E+E+KYYR+GIK
Sbjct: 621 LEIFHLVMYRNYQRK--NDMDEPPPLDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIK 678
Query: 137 PEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNXXXXXX 196
PEW+ +R+IN + G+ YLVKW+DLPYD++TWE++ +IP + + Y
Sbjct: 679 PEWMTVHRIINHSMDKKGNYHYLVKWKDLPYDQSTWEEDEMNIPEYDDHKQSY------- 731
Query: 197 XXXXXXXELQEDEDGASGSKPRRYTP---------PPEKPTTDLRKKYEKQPPFLDDTGM 247
EL ED A +PR+Y PP PT D KYE QP F+ TG
Sbjct: 732 ---WRHRELIMGEDPA---QPRKYKKKKKEIQGDGPPSSPTNDPTVKYETQPRFITATGG 785
Query: 248 QLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPL 307
LH YQLEG+NWLR+SW Q DTILADEMGLGKTIQTI FLYSL+KEGH KGPFLVSAPL
Sbjct: 786 TLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPL 845
Query: 308 STIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPC-RI-RSSTVK 365
STIINWEREF+ WAP FYVVTY GDKD R ++R+++ S+ED A +GGK ++ R + VK
Sbjct: 846 STIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQVK 905
Query: 366 FHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTP 425
FHVLLTSYELIT D A LGSI WA LVVDEAHRLK+NQSKFF+ L+GY I +KLLLTGTP
Sbjct: 906 FHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTP 965
Query: 426 XXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLK 485
TPE+FN+L F EFADISKE+Q+K+LHDLLGPHMLRRLKADV K
Sbjct: 966 LQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFK 1025
Query: 486 NMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYL 545
NMP+K+E IVRVELSPMQKKYYKYILTRNFEALN +GGG QVSLLNIMMDLKKCCNHPYL
Sbjct: 1026 NMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYL 1085
Query: 546 FPAAAEEAP-VQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
FP AA E+P + G YE AL +++G E GHR
Sbjct: 1086 FPVAAMESPKLPSGAYEGGALIKSSGKLLLLQKMLRKLKEQGHR 1129
Score = 443 (161.0 bits), Expect = 1.8e-234, Sum P(4) = 1.8e-234
Identities = 83/97 (85%), Positives = 90/97 (92%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MTKMLD+LED+LD EGYKYERIDG ITG++RQE+IDRFNAPGA QF FLLSTR+GGL
Sbjct: 1133 FSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGL 1192
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
GINLATADTVII+DSDWNPHNDIQAFSRAHRIGQ NK
Sbjct: 1193 GINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANK 1229
Score = 414 (150.8 bits), Expect = 2.0e-231, Sum P(4) = 2.0e-231
Identities = 79/91 (86%), Positives = 85/91 (93%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATADTVII+DSDWNPHNDIQAFSRAHRIGQ NKVMIYRFVTR SVEER+TQVAKRKM
Sbjct: 1194 INLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKM 1253
Query: 802 MLTHLVVRPGMGGKQANFTKQELDDILRFGT 832
MLTHLVVRPG+G K + +KQELDDIL+FGT
Sbjct: 1254 MLTHLVVRPGLGSKAGSMSKQELDDILKFGT 1284
Score = 236 (88.1 bits), Expect = 1.8e-234, Sum P(4) = 1.8e-234
Identities = 55/106 (51%), Positives = 63/106 (59%)
Query: 848 IIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQTXXXXXXXXXXXXXXXXL 907
IIKQE EN DP YW KLLRHHYEQ QED++R LGKGKRVRKQ
Sbjct: 1357 IIKQE-ENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRVRKQVNYNDAAQEDQDNQSEYS 1415
Query: 908 TG---------RRSAKKKEMSKQ---ERDRPLPPLLARVGGNIEVL 941
G R +++ +Q E+D+PLPPLLARVGGNIEVL
Sbjct: 1416 VGSEEEDEDFDERPEGRRQSKRQLRNEKDKPLPPLLARVGGNIEVL 1461
Score = 186 (70.5 bits), Expect = 1.8e-234, Sum P(4) = 1.8e-234
Identities = 38/45 (84%), Positives = 43/45 (95%)
Query: 939 EVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRL 983
+VLNQLEELLSDMK+DV+RLPATL+RIPP+A RL MSERSILSRL
Sbjct: 1915 KVLNQLEELLSDMKADVTRLPATLSRIPPIAARLQMSERSILSRL 1959
Score = 174 (66.3 bits), Expect = 1.7e-80, Sum P(5) = 1.7e-80
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 584 EDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIE 643
E +R+GIKPEW+ +R+IN + G+ YLVKW+DLPYD++TWE++ +IP + +
Sbjct: 670 EKYYRFGIKPEWMTVHRIINHSMDKKGNYHYLVKWKDLPYDQSTWEEDEMNIPEYDDHKQ 729
Query: 644 FYNMTKMLDILEDYLDGEGYKYER 667
Y + L + ED YK ++
Sbjct: 730 SYWRHRELIMGEDPAQPRKYKKKK 753
Score = 42 (19.8 bits), Expect = 1.7e-80, Sum P(5) = 1.7e-80
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 144 RVINSKTLRDGSTIYLVKWRDLPYDKATWEDE 175
RV+ ++ R+ + VKW L Y +W E
Sbjct: 591 RVLQGRSERE----FFVKWVGLSYWHCSWAKE 618
Score = 42 (19.8 bits), Expect = 2.3e-70, Sum P(4) = 2.3e-70
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 600 RVINSKTLRDGSTIYLVKWRDLPYDKATWEDE 631
RV+ ++ R+ + VKW L Y +W E
Sbjct: 591 RVLQGRSERE----FFVKWVGLSYWHCSWAKE 618
>ZFIN|ZDB-GENE-030131-4532 [details] [associations]
symbol:chd4b "chromodomain helicase DNA binding
protein 4b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-030131-4532
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX511250
IPI:IPI00931161 RefSeq:XP_685699.4 UniGene:Dr.75373
Ensembl:ENSDART00000092902 Ensembl:ENSDART00000148389 GeneID:560622
KEGG:dre:560622 CTD:560622 NextBio:20883532 Uniprot:F1RBT2
Length = 1953
Score = 1443 (513.0 bits), Expect = 2.6e-234, Sum P(5) = 2.6e-234
Identities = 282/471 (59%), Positives = 338/471 (71%)
Query: 126 LEKKYYRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKES 185
+E KY R+G+K EWL +R++N + + YL+KWRDLPYD++TWE E+ D+P +
Sbjct: 618 MEDKYGRFGVKIEWLFIHRILNHSVDKKNNVHYLIKWRDLPYDQSTWESEDMDVPDFETY 677
Query: 186 IEFYNXXXXXXXXXXXXXELQEDEDGASGSKPR----RYTP-PPEKPTTDLRKKYEKQPP 240
+ Y EL E+G G K + R T PP P D K+++QP
Sbjct: 678 KQHY----------WNHRELMLGEEGRPGKKMKKVKVRKTERPPANPVVDPTIKFDRQPD 727
Query: 241 FLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGP 300
+LD TG LH YQLEG+NWLR+SW Q DTILADEMGLGKT+QT FLYSL+KEGH KGP
Sbjct: 728 YLDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGP 787
Query: 301 FLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRI- 359
FLVSAPLSTIINWEREFE WAPD YVVTYVGDKD R V+R+++ ++ED A RGGK
Sbjct: 788 FLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAVIRENEFTFEDNAIRGGKKASKM 847
Query: 360 -RSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNK 418
+ + VKFHVLLTSYELIT D A+LGSI+WA LVVDEAHRLK+NQSKFF+ L+ Y +Q+K
Sbjct: 848 KKEAAVKFHVLLTSYELITIDQAILGSIDWACLVVDEAHRLKNNQSKFFRVLNNYPLQHK 907
Query: 419 LLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRR 478
LLLTGTP TPE+FN+L F EFADI+KE+Q+K+LHD+LGPHMLRR
Sbjct: 908 LLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRR 967
Query: 479 LKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKK 538
LKADV K+MPSK+E IVRVELSPMQKKYYKYILTRNFEALN +GGG QVSLLN++MDLKK
Sbjct: 968 LKADVFKHMPSKTELIVRVELSPMQKKYYKYILTRNFEALNTRGGGNQVSLLNVVMDLKK 1027
Query: 539 CCNHPYLFPAAAEEAP-VQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
CCNHPYLFP AA EAP + G Y+ ALT+A+G E GHR
Sbjct: 1028 CCNHPYLFPTAATEAPKMPNGMYDGSALTKASGKLMLLFKMLKKLKEGGHR 1078
Score = 446 (162.1 bits), Expect = 2.6e-234, Sum P(5) = 2.6e-234
Identities = 83/97 (85%), Positives = 89/97 (91%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MTKMLD+LED+L+ EGYKYERIDG +TG MRQE+IDRFNAPGA QFVFLLSTR+GGL
Sbjct: 1082 FSQMTKMLDLLEDFLENEGYKYERIDGGVTGGMRQEAIDRFNAPGAPQFVFLLSTRAGGL 1141
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ K
Sbjct: 1142 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKK 1178
Score = 407 (148.3 bits), Expect = 3.3e-230, Sum P(5) = 3.3e-230
Identities = 77/91 (84%), Positives = 84/91 (92%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ KVMIYRFVT+ SVEER+TQVAK+KM
Sbjct: 1143 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTKASVEERITQVAKKKM 1202
Query: 802 MLTHLVVRPGMGGKQANFTKQELDDILRFGT 832
MLTHLVVRPG+G K + +KQELDDIL+FGT
Sbjct: 1203 MLTHLVVRPGLGSKAGSMSKQELDDILKFGT 1233
Score = 181 (68.8 bits), Expect = 2.6e-234, Sum P(5) = 2.6e-234
Identities = 38/45 (84%), Positives = 42/45 (93%)
Query: 939 EVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRL 983
+VL QLEELLSDMK+DV+RLPAT+ARIPPVA RL MSERSILSRL
Sbjct: 1895 KVLKQLEELLSDMKADVTRLPATIARIPPVAVRLQMSERSILSRL 1939
Score = 163 (62.4 bits), Expect = 4.8e-76, Sum P(6) = 4.8e-76
Identities = 31/86 (36%), Positives = 52/86 (60%)
Query: 584 EDGH-RYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESI 642
ED + R+G+K EWL +R++N + + YL+KWRDLPYD++TWE E+ D+P +
Sbjct: 619 EDKYGRFGVKIEWLFIHRILNHSVDKKNNVHYLIKWRDLPYDQSTWESEDMDVPDFETYK 678
Query: 643 EFYNMTKMLDILEDYLDGEGYKYERI 668
+ Y + L + E+ G+ K ++
Sbjct: 679 QHYWNHRELMLGEEGRPGKKMKKVKV 704
Score = 156 (60.0 bits), Expect = 2.6e-234, Sum P(5) = 2.6e-234
Identities = 31/41 (75%), Positives = 34/41 (82%)
Query: 848 IIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRK 888
IIKQE E+ DP YW KLLRHHYEQ QED++R LGKGKR RK
Sbjct: 1308 IIKQE-ESVDPDYWEKLLRHHYEQQQEDLARHLGKGKRPRK 1347
Score = 97 (39.2 bits), Expect = 2.6e-234, Sum P(5) = 2.6e-234
Identities = 20/32 (62%), Positives = 26/32 (81%)
Query: 910 RRSAKKKEMSKQERDRPLPPLLARVGGNIEVL 941
RR ++K + ++D+PLPPLLARVGGNIEVL
Sbjct: 1397 RRPSRKG--LRNDKDKPLPPLLARVGGNIEVL 1426
Score = 47 (21.6 bits), Expect = 4.8e-76, Sum P(6) = 4.8e-76
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 208 DEDGASGSKPRRYTPPPEKPTTD 230
++ G SG K +R P PE+ D
Sbjct: 111 EKAGGSGGKSKRKEPEPEEEDDD 133
Score = 42 (19.8 bits), Expect = 1.6e-75, Sum P(6) = 1.6e-75
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 214 GSKPRRYTPPPEKPTTDLRKKYEKQPP 240
G RR T P KP D + K +K P
Sbjct: 283 GPNARRKTKPTPKPQ-DKKSKAKKVAP 308
Score = 39 (18.8 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 122 NDEELEKKYYRYGIKPE 138
+DE+ E K + G+KPE
Sbjct: 1690 SDEKKELKDEKDGVKPE 1706
Score = 38 (18.4 bits), Expect = 4.1e-75, Sum P(6) = 4.1e-75
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 222 PPPEKP-TTDLRKKYEKQ 238
PPP++P LRK K+
Sbjct: 263 PPPQQPPAVPLRKAKTKE 280
Score = 38 (18.4 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 912 SAKKKEMSKQERDRPLPPLLARVGGN 937
S KKK+ S +DR + GG+
Sbjct: 91 SKKKKKRSSSSKDRKKGSAGEKAGGS 116
>UNIPROTKB|F1MFF9 [details] [associations]
symbol:Bt.62145 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:DAAA02043090 IPI:IPI00688794
Ensembl:ENSBTAT00000010688 Uniprot:F1MFF9
Length = 1852
Score = 1448 (514.8 bits), Expect = 2.5e-232, Sum P(4) = 2.5e-232
Identities = 287/515 (55%), Positives = 352/515 (68%)
Query: 77 LEVYHPQLLKSYMKKMNNDFTXXXXXXXXXXXXXKRMARLNRHNINDEELEKKYYRYGIK 136
LE+YH + ++Y +K + D K R N+ + ++E+++YRYGIK
Sbjct: 477 LELYHTVMYRNYQRKNDMD-EPPPFDYGSGDEDGKSEKRKNKDPLY-AKMEERFYRYGIK 534
Query: 137 PEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNXXXXXX 196
PEW++ +R++N + G YL+KW+DLPYD+ TWE + DIP + Y
Sbjct: 535 PEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDEIDIPYYDSLKQAYWGHRELM 594
Query: 197 XXXXXXXELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEG 256
+ + G K + PP+ P D K++KQP ++D TG LH YQLEG
Sbjct: 595 LGEDARLPKRLVKKGKK-LKDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEG 653
Query: 257 INWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWERE 316
+NWLR+SW Q DTILADEMGLGKT+QTI FLYSL+KEGH KGP+LVSAPLSTIINWERE
Sbjct: 654 LNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWERE 713
Query: 317 FETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPC-RIRSST-VKFHVLLTSYE 374
FE WAPDFYVVTY GDK+ R V+R+++ S+ED A R GK R++ +KFHVLLTSYE
Sbjct: 714 FEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYE 773
Query: 375 LITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXX 434
LIT D A+LGSIEWA LVVDEAHRLK+NQSKFF+ L+ Y I KLLLTGTP
Sbjct: 774 LITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELF 833
Query: 435 XXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFI 494
TPE+FN+L F EFADISKE+Q+K+LHDLLGPHMLRRLKADV KNMP+K+E I
Sbjct: 834 HLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELI 893
Query: 495 VRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAP 554
VRVELS MQKKYYK+ILTRNFEALN KGGG QVSLLNIMMDLKKCCNHPYLFP AA EAP
Sbjct: 894 VRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAP 953
Query: 555 V-QGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
V G Y+ +L +++G ++GHR
Sbjct: 954 VLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHR 988
Score = 437 (158.9 bits), Expect = 2.5e-232, Sum P(4) = 2.5e-232
Identities = 82/97 (84%), Positives = 88/97 (90%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MTKMLD+LED+L+ EGYKYERIDG ITG +RQE+IDRFNAPGA QF FLLSTR+GGL
Sbjct: 992 FSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGL 1051
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ K
Sbjct: 1052 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKK 1088
Score = 418 (152.2 bits), Expect = 2.5e-230, Sum P(4) = 2.5e-230
Identities = 80/91 (87%), Positives = 84/91 (92%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ KVMIYRFVTR SVEER+TQVAKRKM
Sbjct: 1053 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKM 1112
Query: 802 MLTHLVVRPGMGGKQANFTKQELDDILRFGT 832
MLTHLVVRPG+G K + TKQELDDIL+FGT
Sbjct: 1113 MLTHLVVRPGLGSKSGSMTKQELDDILKFGT 1143
Score = 231 (86.4 bits), Expect = 2.5e-232, Sum P(4) = 2.5e-232
Identities = 54/107 (50%), Positives = 63/107 (58%)
Query: 848 IIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQTXXXXXXXXXXXXXXXXL 907
IIKQE EN DP YW KLLRHHYEQ QED++R LGKGKR+RKQ
Sbjct: 1217 IIKQE-ENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQDNQSEYS 1275
Query: 908 TG----------RRSAKKKEMSKQ---ERDRPLPPLLARVGGNIEVL 941
G R +++ +Q +RD+PLPPLLARVGGNIEVL
Sbjct: 1276 IGSEDEDEDFEERPEGGRRQSRRQLKSDRDKPLPPLLARVGGNIEVL 1322
Score = 178 (67.7 bits), Expect = 2.5e-232, Sum P(4) = 2.5e-232
Identities = 37/45 (82%), Positives = 42/45 (93%)
Query: 939 EVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRL 983
+VLNQLEELLSDMK+DV+RLP+ L+RIPPVA RL MSERSILSRL
Sbjct: 1751 KVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRL 1795
Score = 165 (63.1 bits), Expect = 9.1e-81, Sum P(5) = 9.1e-81
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 587 HRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIP 636
+RYGIKPEW++ +R++N + G YL+KW+DLPYD+ TWE + DIP
Sbjct: 529 YRYGIKPEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDEIDIP 578
Score = 48 (22.0 bits), Expect = 2.3e-66, Sum P(5) = 2.3e-66
Identities = 14/52 (26%), Positives = 24/52 (46%)
Query: 614 YLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILE----DYLDGE 661
+ VKW L Y +W E + + L ++ + N + D+ E DY G+
Sbjct: 456 FFVKWAGLSYWHCSWVKELQQLE-LYHTVMYRNYQRKNDMDEPPPFDYGSGD 506
Score = 47 (21.6 bits), Expect = 1.7e-195, Sum P(3) = 1.7e-195
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 909 GRRSAKKKEMSKQERDRPLPPLLARVGGNI--EVLNQLEELLSDMKSDVSRLP 959
G+ A+++ + + E+ +P P L + GN VL + + ++ VSR P
Sbjct: 1506 GKERAREERLEEMEKAQPSPEQLLK--GNFISHVLLLISKRSRNVPLSVSRTP 1556
Score = 46 (21.3 bits), Expect = 5.3e-69, Sum P(4) = 5.3e-69
Identities = 22/109 (20%), Positives = 44/109 (40%)
Query: 158 YLVKWRDLPYDKATWEDENEDIPGLKESIEFYNXXXXXXXXXXXXXELQE-DEDGASGSK 216
+ VKW L Y +W E + + L ++ + N + DEDG S +
Sbjct: 456 FFVKWAGLSYWHCSWVKELQQLE-LYHTVMYRNYQRKNDMDEPPPFDYGSGDEDGKS--E 512
Query: 217 PRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEG-INWLRYSW 264
R+ P + +Y +P ++ + H++ +G +++L W
Sbjct: 513 KRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYL-IKW 560
Score = 38 (18.4 bits), Expect = 9.1e-81, Sum P(5) = 9.1e-81
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 204 ELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQ 238
E +ED + S S+ Y+P +K L+ K EK+
Sbjct: 7 ENEEDLEEKSESEGSDYSPNKKKKKK-LKDKKEKK 40
>UNIPROTKB|F1NH79 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02061139 EMBL:AADN02061140 EMBL:AADN02061141
EMBL:AADN02061142 EMBL:AADN02061143 IPI:IPI00598956
Ensembl:ENSGALT00000023339 OMA:DGEHEHQ Uniprot:F1NH79
Length = 1895
Score = 1495 (531.3 bits), Expect = 5.9e-223, Sum P(5) = 5.9e-223
Identities = 295/520 (56%), Positives = 365/520 (70%)
Query: 77 LEVYHPQLLKSYMKKMNNDFTXXXXXXXXXXXXXKRMARLNRHNINDEELEKKYYRYGIK 136
LE++ + ++Y +K + D KR + ++ E+E+++YRYGIK
Sbjct: 533 LELHCQVMFRNYQRKNDMDEPPSGDFGGEEEKSRKRKNKDPKY----AEMEERFYRYGIK 588
Query: 137 PEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNXXXXXX 196
PEW++ +R++N + G+ YL+KWRDLPYD+A+WE E+ DI + + Y
Sbjct: 589 PEWMMIHRILNHSVDKKGNVHYLIKWRDLPYDQASWESEDVDI----QDYDLYKQAYWNH 644
Query: 197 XXXXXXXELQEDEDGASGSK-----PRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHA 251
EL E+G G K R+ PPE PT D KY++QP +LD TG LH
Sbjct: 645 R------ELMRGEEGRPGKKLKKVKMRKLERPPETPTVDPTVKYDRQPEYLDVTGGTLHP 698
Query: 252 YQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTII 311
YQLEG+NWLR+SW Q DTILADEMGLGKT+QT FLYSL+KEGH KGPFLVSAPLSTII
Sbjct: 699 YQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTII 758
Query: 312 NWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPC-RIRS-STVKFHVL 369
NWEREFE WAPD YVVTYVGDKD R ++R+++ ++ED A RGGK R++ + VKFHVL
Sbjct: 759 NWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFTFEDNAIRGGKKASRMKKEAAVKFHVL 818
Query: 370 LTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXX 429
LTSYELIT D+A+LGSI+WA L+VDEAHRLK+NQSKFF+ L+GYS+Q+KLLLTGTP
Sbjct: 819 LTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNN 878
Query: 430 XXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPS 489
TPE+F++L F EFADI+KE+Q+K+LHD+LGPHMLRRLKADV KNMPS
Sbjct: 879 LEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPS 938
Query: 490 KSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAA 549
K+E IVRVELSPMQKKYYKYILTRNFEALN +GGG QVSLLN++MDLKKCCNHPYLFP A
Sbjct: 939 KTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVA 998
Query: 550 AEEAP-VQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
A EAP + G Y+ AL RA+G E GHR
Sbjct: 999 AMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHR 1038
Score = 277 (102.6 bits), Expect = 5.9e-223, Sum P(5) = 5.9e-223
Identities = 60/102 (58%), Positives = 75/102 (73%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGG- 702
F MTKMLD+LED+L+ EGYKYERIDG ITG+MRQE+IDRFNAPGA F FLLSTR+GG
Sbjct: 1042 FSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQGFCFLLSTRAGGP 1101
Query: 703 -LGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYIN 743
L L +++ + DS + + +SRAHR+GQ NK +N
Sbjct: 1102 CLWSPLRSSERNV--DSSLSRKTMQKTYSRAHRLGQ-NKKVN 1140
Score = 194 (73.4 bits), Expect = 3.2e-214, Sum P(5) = 3.2e-214
Identities = 41/70 (58%), Positives = 53/70 (75%)
Query: 764 QAFSRAHRIGQQNKVMIYRFVTRN-SVEERVTQVAKRKMMLTHLVVRPGMGGKQANFTKQ 822
+ +SRAHR+GQ KV RFVT++ S +QVA+++MMLTHLVVRPG G K + +KQ
Sbjct: 1125 KTYSRAHRLGQNKKVNDIRFVTKSISGRSASSQVAQKEMMLTHLVVRPG-GSKTGSMSKQ 1183
Query: 823 ELDDILRFGT 832
ELDDIL+FGT
Sbjct: 1184 ELDDILKFGT 1193
Score = 178 (67.7 bits), Expect = 5.9e-223, Sum P(5) = 5.9e-223
Identities = 37/45 (82%), Positives = 42/45 (93%)
Query: 939 EVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRL 983
+VL QLEELLSDMK+DV+RLPAT+ARIPPVA RL MSER+ILSRL
Sbjct: 1831 KVLKQLEELLSDMKADVTRLPATIARIPPVAVRLQMSERNILSRL 1875
Score = 172 (65.6 bits), Expect = 3.0e-63, Sum P(6) = 3.0e-63
Identities = 27/49 (55%), Positives = 39/49 (79%)
Query: 587 HRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDI 635
+RYGIKPEW++ +R++N + G+ YL+KWRDLPYD+A+WE E+ DI
Sbjct: 583 YRYGIKPEWMMIHRILNHSVDKKGNVHYLIKWRDLPYDQASWESEDVDI 631
Score = 168 (64.2 bits), Expect = 5.9e-223, Sum P(5) = 5.9e-223
Identities = 32/42 (76%), Positives = 36/42 (85%)
Query: 848 IIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQ 889
IIKQE E+ DP YW KLLRHHYEQ QED++R LGKGKR+RKQ
Sbjct: 1271 IIKQE-ESVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQ 1311
Score = 97 (39.2 bits), Expect = 5.9e-223, Sum P(5) = 5.9e-223
Identities = 20/32 (62%), Positives = 26/32 (81%)
Query: 910 RRSAKKKEMSKQERDRPLPPLLARVGGNIEVL 941
RR ++K + ++D+PLPPLLARVGGNIEVL
Sbjct: 1354 RRPSRKG--LRNDKDKPLPPLLARVGGNIEVL 1383
Score = 48 (22.0 bits), Expect = 3.0e-63, Sum P(6) = 3.0e-63
Identities = 15/47 (31%), Positives = 27/47 (57%)
Query: 442 PEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMP 488
PE+ +L S +AE I K+++ K+L + P + +R K + L +P
Sbjct: 7 PEE--ELLS-EAETLKIKKKKKPKKLKEPKVPKLSKRQKKESLSLLP 50
Score = 41 (19.5 bits), Expect = 1.6e-62, Sum P(6) = 1.6e-62
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 158 YLVKWRDLPYDKATWEDE 175
+ VKW+ + Y +W E
Sbjct: 513 FFVKWQGMSYWHCSWVSE 530
Score = 41 (19.5 bits), Expect = 7.7e-50, Sum P(6) = 7.7e-50
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 614 YLVKWRDLPYDKATWEDE 631
+ VKW+ + Y +W E
Sbjct: 513 FFVKWQGMSYWHCSWVSE 530
Score = 40 (19.1 bits), Expect = 5.7e-07, Sum P(3) = 5.7e-07
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 204 ELQEDEDGASGSKPRRYTPPPEKP 227
E++E++ + S P TP P P
Sbjct: 1492 EIEENKKLSQPSSPSPKTPTPSTP 1515
Score = 39 (18.8 bits), Expect = 6.3e-198, Sum P(5) = 6.3e-198
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 667 RIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSD 719
R G+ TGSM ++ +D G + +F GG N D+ +I+ D
Sbjct: 1171 RPGGSKTGSMSKQELDDILKFGTEE-LFKDEATEGG--DNKEGEDSSVIHYDD 1220
Score = 38 (18.4 bits), Expect = 3.2e-62, Sum P(6) = 3.2e-62
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 215 SKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQ 248
SK +R E+ D K+ + L+D GM+
Sbjct: 97 SKAKRKEEEDEEEEDDDSKEPKSSTQLLEDWGME 130
Score = 38 (18.4 bits), Expect = 3.2e-62, Sum P(6) = 3.2e-62
Identities = 10/43 (23%), Positives = 21/43 (48%)
Query: 205 LQEDEDGAS---GSKPRRYTPPPEKPTTDLRKKYEKQPPFLDD 244
L+ D +G+ G K ++ P ++ + ++K E+ DD
Sbjct: 70 LRSDSEGSDYTPGKKKKKKLGPKKEKKSKAKRKEEEDEEEEDD 112
Score = 38 (18.4 bits), Expect = 9.0e-07, Sum P(3) = 9.0e-07
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 204 ELQEDEDGASGSKPRRYTPPPEKPT 228
EL E E+ S+P +P P+ PT
Sbjct: 1489 ELAEIEENKKLSQPS--SPSPKTPT 1511
>UNIPROTKB|F1NH78 [details] [associations]
symbol:F1NH78 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02040929 EMBL:AADN02040930 IPI:IPI00571784
Ensembl:ENSGALT00000023340 ArrayExpress:F1NH78 Uniprot:F1NH78
Length = 1781
Score = 1449 (515.1 bits), Expect = 2.0e-222, Sum P(5) = 2.0e-222
Identities = 288/516 (55%), Positives = 355/516 (68%)
Query: 77 LEVYHPQLLKSYMKKMNNDFTXXXXXXXXXXXXXKRMARLNRHNINDEELEKKYYRYGIK 136
LE+YH + ++Y +K + D +R R N+ + + ++E+++YRYGIK
Sbjct: 462 LELYHTVMYRNYQRKNDMD-EPPAFDYGSGDEDSQREKRKNK-DPHYAKMEERFYRYGIK 519
Query: 137 PEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNXXXXXX 196
PEW++ +R++N + G YL+KW+DLPYD+ TWE + DIP E+++
Sbjct: 520 PEWMMIHRILNHSFDKKGDIHYLIKWKDLPYDQCTWEIDEIDIP-YYENLKLLYWNHREL 578
Query: 197 XXXXXXXELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEG 256
L++ K + PPE P D K++KQP ++D TG LH YQLEG
Sbjct: 579 MLGEDTRPLKKLNKKGKKLKEEKLEKPPETPLVDPTVKFDKQPWYIDATGGTLHPYQLEG 638
Query: 257 INWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKE-GHCKGPFLVSAPLSTIINWER 315
+NWLR+SW Q DTILADEMGLGKT+QTI FLYSL+KE GH KGP+LVSAPLSTIINWER
Sbjct: 639 LNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEQGHSKGPYLVSAPLSTIINWER 698
Query: 316 EFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPC-RIRSST-VKFHVLLTSY 373
EFE WAPDFYVVTY GDK+ R V+R+++ S+ED A R GK R++ +KFHVLLTSY
Sbjct: 699 EFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSY 758
Query: 374 ELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXX 433
ELIT D A+LGSIEWA LVVDEAHRLK+NQSKFF+ L+ Y I KLLLTGTP
Sbjct: 759 ELITIDQAVLGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEEL 818
Query: 434 XXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEF 493
TPE+FN+L F EFADISKE+Q+K+LHDLLGPHMLRRLKADV KNMP+K+E
Sbjct: 819 FHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTEL 878
Query: 494 IVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEA 553
IVRVELS MQKKYYK+ILTRNFEALN KGGG QVSLLNIMMDLKKCCNHPYLFP AA EA
Sbjct: 879 IVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEA 938
Query: 554 PV-QGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
PV G Y+ +L +++G + GHR
Sbjct: 939 PVLPNGSYDGNSLVKSSGKLMLLQKMLKKLRDGGHR 974
Score = 437 (158.9 bits), Expect = 2.0e-222, Sum P(5) = 2.0e-222
Identities = 82/97 (84%), Positives = 88/97 (90%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MTKMLD+LED+L+ EGYKYERIDG ITG +RQE+IDRFNAPGA QF FLLSTR+GGL
Sbjct: 978 FSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGL 1037
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ K
Sbjct: 1038 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKK 1074
Score = 418 (152.2 bits), Expect = 2.0e-220, Sum P(5) = 2.0e-220
Identities = 80/91 (87%), Positives = 84/91 (92%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ KVMIYRFVTR SVEER+TQVAKRKM
Sbjct: 1039 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKM 1098
Query: 802 MLTHLVVRPGMGGKQANFTKQELDDILRFGT 832
MLTHLVVRPG+G K + TKQELDDIL+FGT
Sbjct: 1099 MLTHLVVRPGLGSKSGSMTKQELDDILKFGT 1129
Score = 173 (66.0 bits), Expect = 2.0e-222, Sum P(5) = 2.0e-222
Identities = 33/42 (78%), Positives = 36/42 (85%)
Query: 848 IIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQ 889
IIKQE EN DP YW KLLRHHYEQ QED++R LGKGKR+RKQ
Sbjct: 1207 IIKQE-ENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQ 1247
Score = 164 (62.8 bits), Expect = 8.1e-68, Sum P(6) = 8.1e-68
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 587 HRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIP 636
+RYGIKPEW++ +R++N + G YL+KW+DLPYD+ TWE + DIP
Sbjct: 514 YRYGIKPEWMMIHRILNHSFDKKGDIHYLIKWKDLPYDQCTWEIDEIDIP 563
Score = 110 (43.8 bits), Expect = 2.0e-222, Sum P(5) = 2.0e-222
Identities = 22/33 (66%), Positives = 28/33 (84%)
Query: 909 GRRSAKKKEMSKQERDRPLPPLLARVGGNIEVL 941
GRR ++++ K +RD+PLPPLLARVGGNIEVL
Sbjct: 1289 GRRQSRRQ--LKSDRDKPLPPLLARVGGNIEVL 1319
Score = 41 (19.5 bits), Expect = 2.0e-222, Sum P(5) = 2.0e-222
Identities = 9/11 (81%), Positives = 10/11 (90%)
Query: 939 EVLNQLEELLS 949
+VLN LEELLS
Sbjct: 1771 KVLNHLEELLS 1781
Score = 40 (19.1 bits), Expect = 8.1e-68, Sum P(6) = 8.1e-68
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 158 YLVKWRDLPYDKATWEDE 175
+ VKW L Y +W E
Sbjct: 442 FFVKWAGLSYWHCSWVKE 459
Score = 40 (19.1 bits), Expect = 3.9e-55, Sum P(5) = 3.9e-55
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 614 YLVKWRDLPYDKATWEDE 631
+ VKW L Y +W E
Sbjct: 442 FFVKWAGLSYWHCSWVKE 459
Score = 38 (18.4 bits), Expect = 1.1e-197, Sum P(4) = 1.1e-197
Identities = 13/56 (23%), Positives = 20/56 (35%)
Query: 873 QEDVSRTLGKGKRVRKQTXXXXXXXXXXXXXXXXLTGRRSAKKKEMSKQERDRPLP 928
++ V +G VRK+ L G S K EM + + P+P
Sbjct: 1394 RQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDMILEGPESKKCSEMVSSDPNTPVP 1449
>UNIPROTKB|F1SSZ2 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:FP102454 Ensembl:ENSSSCT00000019561 Uniprot:F1SSZ2
Length = 1667
Score = 1448 (514.8 bits), Expect = 4.1e-222, Sum P(5) = 4.1e-222
Identities = 286/515 (55%), Positives = 353/515 (68%)
Query: 77 LEVYHPQLLKSYMKKMNNDFTXXXXXXXXXXXXXKRMARLNRHNINDEELEKKYYRYGIK 136
LE+YH + ++Y +K + D K R N+ + ++E+++YRYGIK
Sbjct: 447 LELYHTVMYRNYQRKNDMD-EPPPFDYGSGDEDSKSEKRKNKDPLY-AKMEERFYRYGIK 504
Query: 137 PEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNXXXXXX 196
PEW++ +R++N + G YL+KW+DLPYD+ TWE ++ DIP + Y
Sbjct: 505 PEWMMVHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYDSLKQAYWGHRELM 564
Query: 197 XXXXXXXELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEG 256
+ + G + + PP+ P D K++KQP ++D TG LH YQLEG
Sbjct: 565 LGEDARLPKRLVKKGKK-LRDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEG 623
Query: 257 INWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWERE 316
+NWLR+SW Q DTILADEMGLGKT+QTI FLYSL+KEGH KGP+LVSAPLSTIINWERE
Sbjct: 624 LNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWERE 683
Query: 317 FETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPC-RIRSST-VKFHVLLTSYE 374
FE WAPDFYVVTY GDK+ R V+R+++ S+ED A R GK R++ +KFHVLLTSYE
Sbjct: 684 FEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYE 743
Query: 375 LITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXX 434
LIT D A+LGSIEWA LVVDEAHRLK+NQSKFF+ L+ Y I KLLLTGTP
Sbjct: 744 LITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELF 803
Query: 435 XXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFI 494
TPE+FN+L F EFADISKE+Q+K+LHDLLGPHMLRRLKADV KNMP+K+E I
Sbjct: 804 HLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELI 863
Query: 495 VRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAP 554
VRVELS MQKKYYK+ILTRNFEALN KGGG QVSLLNIMMDLKKCCNHPYLFP AA EAP
Sbjct: 864 VRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAP 923
Query: 555 V-QGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
V G Y+ +L +++G ++GHR
Sbjct: 924 VLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHR 958
Score = 437 (158.9 bits), Expect = 4.1e-222, Sum P(5) = 4.1e-222
Identities = 82/97 (84%), Positives = 88/97 (90%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MTKMLD+LED+L+ EGYKYERIDG ITG +RQE+IDRFNAPGA QF FLLSTR+GGL
Sbjct: 962 FSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGL 1021
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ K
Sbjct: 1022 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKK 1058
Score = 418 (152.2 bits), Expect = 4.1e-220, Sum P(5) = 4.1e-220
Identities = 80/91 (87%), Positives = 84/91 (92%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ KVMIYRFVTR SVEER+TQVAKRKM
Sbjct: 1023 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKM 1082
Query: 802 MLTHLVVRPGMGGKQANFTKQELDDILRFGT 832
MLTHLVVRPG+G K + TKQELDDIL+FGT
Sbjct: 1083 MLTHLVVRPGLGSKSGSMTKQELDDILKFGT 1113
Score = 173 (66.0 bits), Expect = 4.1e-222, Sum P(5) = 4.1e-222
Identities = 33/42 (78%), Positives = 36/42 (85%)
Query: 848 IIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQ 889
IIKQE EN DP YW KLLRHHYEQ QED++R LGKGKR+RKQ
Sbjct: 1187 IIKQE-ENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQ 1227
Score = 167 (63.8 bits), Expect = 3.5e-68, Sum P(6) = 3.5e-68
Identities = 26/50 (52%), Positives = 38/50 (76%)
Query: 587 HRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIP 636
+RYGIKPEW++ +R++N + G YL+KW+DLPYD+ TWE ++ DIP
Sbjct: 499 YRYGIKPEWMMVHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIP 548
Score = 111 (44.1 bits), Expect = 4.1e-222, Sum P(5) = 4.1e-222
Identities = 22/34 (64%), Positives = 29/34 (85%)
Query: 908 TGRRSAKKKEMSKQERDRPLPPLLARVGGNIEVL 941
+GRR ++++ K +RD+PLPPLLARVGGNIEVL
Sbjct: 1270 SGRRQSRRQ--LKSDRDKPLPPLLARVGGNIEVL 1301
Score = 54 (24.1 bits), Expect = 3.7e-213, Sum P(4) = 3.7e-213
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 922 ERDRPLPP------LLARVGGNIEVLNQLEELLSDMKSD 954
ER RP PP L+A VG EVL + E++L +++D
Sbjct: 1502 ERSRPPPPPPQKTLLMAPVGLLKEVLPEKEKILDKLETD 1540
Score = 46 (21.3 bits), Expect = 2.6e-212, Sum P(4) = 2.6e-212
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 909 GRRSAKKKEMSKQERDRPLPPLLARVGG 936
G+ A+++ + + E+ +P P L + GG
Sbjct: 1468 GKERAREERLEEAEKAQPSPEQLPKGGG 1495
Score = 41 (19.5 bits), Expect = 4.6e-53, Sum P(5) = 4.6e-53
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 614 YLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILE----DYLDG-EGYKYER 667
+ VKW L Y +W E + L ++ + N + D+ E DY G E K E+
Sbjct: 427 FFVKWAGLSYWHCSWVKELQ--LELYHTVMYRNYQRKNDMDEPPPFDYGSGDEDSKSEK 483
Score = 40 (19.1 bits), Expect = 3.5e-68, Sum P(6) = 3.5e-68
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 158 YLVKWRDLPYDKATWEDE 175
+ VKW L Y +W E
Sbjct: 427 FFVKWAGLSYWHCSWVKE 444
Score = 38 (18.4 bits), Expect = 4.1e-222, Sum P(5) = 4.1e-222
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 945 EELLSDMKSDVSRLPATLARIPPVAQRLHMSERSI 979
E + SD + V PA L PP L +E+++
Sbjct: 1420 EVISSDPNTPVPASPAHLLPAPPGLPGLGANEQAL 1454
Score = 38 (18.4 bits), Expect = 1.8e-211, Sum P(4) = 1.8e-211
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 926 PLPPLLARVGGNIEVLNQLE 945
P PP L +G N + L+ +E
Sbjct: 1439 PAPPGLPGLGANEQALDGVE 1458
>UNIPROTKB|F1RIM3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:FP102454 Ensembl:ENSSSCT00000003736 Uniprot:F1RIM3
Length = 1723
Score = 1448 (514.8 bits), Expect = 3.7e-219, Sum P(4) = 3.7e-219
Identities = 286/515 (55%), Positives = 353/515 (68%)
Query: 77 LEVYHPQLLKSYMKKMNNDFTXXXXXXXXXXXXXKRMARLNRHNINDEELEKKYYRYGIK 136
LE+YH + ++Y +K + D K R N+ + ++E+++YRYGIK
Sbjct: 463 LELYHTVMYRNYQRKNDMD-EPPPFDYGSGDEDSKSEKRKNKDPLY-AKMEERFYRYGIK 520
Query: 137 PEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNXXXXXX 196
PEW++ +R++N + G YL+KW+DLPYD+ TWE ++ DIP + Y
Sbjct: 521 PEWMMVHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYDSLKQAYWGHRELM 580
Query: 197 XXXXXXXELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEG 256
+ + G + + PP+ P D K++KQP ++D TG LH YQLEG
Sbjct: 581 LGEDARLPKRLVKKGKK-LRDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEG 639
Query: 257 INWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWERE 316
+NWLR+SW Q DTILADEMGLGKT+QTI FLYSL+KEGH KGP+LVSAPLSTIINWERE
Sbjct: 640 LNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWERE 699
Query: 317 FETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPC-RIRSST-VKFHVLLTSYE 374
FE WAPDFYVVTY GDK+ R V+R+++ S+ED A R GK R++ +KFHVLLTSYE
Sbjct: 700 FEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYE 759
Query: 375 LITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXX 434
LIT D A+LGSIEWA LVVDEAHRLK+NQSKFF+ L+ Y I KLLLTGTP
Sbjct: 760 LITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELF 819
Query: 435 XXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFI 494
TPE+FN+L F EFADISKE+Q+K+LHDLLGPHMLRRLKADV KNMP+K+E I
Sbjct: 820 HLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELI 879
Query: 495 VRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAP 554
VRVELS MQKKYYK+ILTRNFEALN KGGG QVSLLNIMMDLKKCCNHPYLFP AA EAP
Sbjct: 880 VRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAP 939
Query: 555 V-QGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
V G Y+ +L +++G ++GHR
Sbjct: 940 VLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHR 974
Score = 437 (158.9 bits), Expect = 3.7e-219, Sum P(4) = 3.7e-219
Identities = 82/97 (84%), Positives = 88/97 (90%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MTKMLD+LED+L+ EGYKYERIDG ITG +RQE+IDRFNAPGA QF FLLSTR+GGL
Sbjct: 978 FSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGL 1037
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ K
Sbjct: 1038 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKK 1074
Score = 418 (152.2 bits), Expect = 3.7e-217, Sum P(4) = 3.7e-217
Identities = 80/91 (87%), Positives = 84/91 (92%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ KVMIYRFVTR SVEER+TQVAKRKM
Sbjct: 1039 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKM 1098
Query: 802 MLTHLVVRPGMGGKQANFTKQELDDILRFGT 832
MLTHLVVRPG+G K + TKQELDDIL+FGT
Sbjct: 1099 MLTHLVVRPGLGSKSGSMTKQELDDILKFGT 1129
Score = 173 (66.0 bits), Expect = 3.7e-219, Sum P(4) = 3.7e-219
Identities = 33/42 (78%), Positives = 36/42 (85%)
Query: 848 IIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQ 889
IIKQE EN DP YW KLLRHHYEQ QED++R LGKGKR+RKQ
Sbjct: 1240 IIKQE-ENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQ 1280
Score = 167 (63.8 bits), Expect = 2.3e-68, Sum P(5) = 2.3e-68
Identities = 26/50 (52%), Positives = 38/50 (76%)
Query: 587 HRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIP 636
+RYGIKPEW++ +R++N + G YL+KW+DLPYD+ TWE ++ DIP
Sbjct: 515 YRYGIKPEWMMVHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIP 564
Score = 111 (44.1 bits), Expect = 3.7e-219, Sum P(4) = 3.7e-219
Identities = 22/34 (64%), Positives = 29/34 (85%)
Query: 908 TGRRSAKKKEMSKQERDRPLPPLLARVGGNIEVL 941
+GRR ++++ K +RD+PLPPLLARVGGNIEVL
Sbjct: 1323 SGRRQSRRQ--LKSDRDKPLPPLLARVGGNIEVL 1354
Score = 45 (20.9 bits), Expect = 3.3e-212, Sum P(4) = 3.3e-212
Identities = 11/44 (25%), Positives = 25/44 (56%)
Query: 909 GRRSAKKKEMSKQERDRPLPPLLARVGGNIEVLNQLEELLSDMK 952
G+ A+++ + + E+ +P P L + EVL + E++L ++
Sbjct: 1541 GKERAREERLEEAEKAQPSPEQLPKE----EVLPEKEKILDKLE 1580
Score = 41 (19.5 bits), Expect = 5.9e-53, Sum P(5) = 5.9e-53
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 614 YLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILE----DYLDG-EGYKYER 667
+ VKW L Y +W E + L ++ + N + D+ E DY G E K E+
Sbjct: 443 FFVKWAGLSYWHCSWVKELQ--LELYHTVMYRNYQRKNDMDEPPPFDYGSGDEDSKSEK 499
Score = 40 (19.1 bits), Expect = 2.3e-68, Sum P(5) = 2.3e-68
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 158 YLVKWRDLPYDKATWEDE 175
+ VKW L Y +W E
Sbjct: 443 FFVKWAGLSYWHCSWVKE 460
Score = 38 (18.4 bits), Expect = 3.6e-68, Sum P(5) = 3.6e-68
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 204 ELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQ 238
E +ED + S S+ Y+P +K L+ K EK+
Sbjct: 9 ENEEDLEEKSESEGSDYSPNKKKKKK-LKDKKEKK 42
>WB|WBGene00000482 [details] [associations]
symbol:chd-3 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=TAS]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] [GO:0046580 "negative regulation of Ras protein
signal transduction" evidence=IMP] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0000118 "histone deacetylase
complex" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=TAS] [GO:0003678 "DNA helicase activity" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0001709 GO:GO:0046580 GO:GO:0008026 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0000118 GeneTree:ENSGT00560000076896
EMBL:AF308444 EMBL:Z67884 EMBL:Z67881 PIR:T20160 RefSeq:NP_510140.1
UniGene:Cel.16950 ProteinModelPortal:Q22516 SMR:Q22516
STRING:Q22516 PaxDb:Q22516 EnsemblMetazoa:T14G8.1 GeneID:181421
KEGG:cel:CELE_T14G8.1 UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1
HOGENOM:HOG000231124 InParanoid:Q22516 OMA:INIIMEL NextBio:913870
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
Uniprot:Q22516
Length = 1787
Score = 1291 (459.5 bits), Expect = 2.5e-209, Sum P(5) = 2.5e-209
Identities = 259/484 (53%), Positives = 331/484 (68%)
Query: 116 LNRHNINDE--ELEKKYYRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWE 173
L+RH+ + + +L +++Y+YG+KPEW+ +R+IN + YLVKW++L Y+ ATWE
Sbjct: 475 LSRHHSDHDPYKLRERFYQYGVKPEWMQIHRIINHLSYAKSQQDYLVKWKELSYEHATWE 534
Query: 174 DENEDIPGLKESIEFYNXXXXXXXXXXXXXELQE---DEDGASGSKPRR--YTPPPEK-P 227
++ DI +++I Y +Q+ + A G P+ T +K
Sbjct: 535 RDDTDIANYEDAIIKYWHHRERMLNDEVPRNVQKMIAKQREAKGLGPKEDEVTSRRKKRE 594
Query: 228 TTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITF 287
D+ KKYE QP F+ +TG LH YQLEGINWLR+ W D ILADEMGLGKT+Q++TF
Sbjct: 595 KIDILKKYEVQPDFISETGGNLHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTF 654
Query: 288 LYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWE 347
LY+L KEGH KGPFL++APLSTIINWERE E W PDFYVVTYVGD++ R+V+R+H+ S+
Sbjct: 655 LYTLMKEGHTKGPFLIAAPLSTIINWEREAELWCPDFYVVTYVGDRESRMVIREHEFSFV 714
Query: 348 DTANRGG-KPCRIRS-STVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSK 405
D A RGG K +I++ +KFHVLLTSYE I D A+L SI+WA LVVDEAHRLK+NQS
Sbjct: 715 DGAVRGGPKVSKIKTLENLKFHVLLTSYECINMDKAILSSIDWAALVVDEAHRLKNNQST 774
Query: 406 FFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVK 465
FFK L Y+IQ ++LLTGTP P++FN L SF AEF++ISKE+Q++
Sbjct: 775 FFKNLREYNIQYRVLLTGTPLQNNLEELFHLLNFLAPDRFNQLESFTAEFSEISKEDQIE 834
Query: 466 RLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQ 525
+LH+LLGPHMLRRLKADVL MPSK E IVRVELS MQKKYYK ILTRNF+ALN K GG
Sbjct: 835 KLHNLLGPHMLRRLKADVLTGMPSKQELIVRVELSAMQKKYYKNILTRNFDALNVKNGGT 894
Query: 526 QVSLLNIMMDLKKCCNHPYLFPAAAEEAP-VQGGQYEIQALTRAAGXXXXXXXXXXXXXE 584
Q+SL+NI+M+LKKCCNHPYLF A EAP ++ G YE AL + AG +
Sbjct: 895 QMSLINIIMELKKCCNHPYLFMKACLEAPKLKNGMYEGSALIKNAGKFVLLQKMLRKLKD 954
Query: 585 DGHR 588
GHR
Sbjct: 955 GGHR 958
Score = 430 (156.4 bits), Expect = 2.5e-209, Sum P(5) = 2.5e-209
Identities = 80/97 (82%), Positives = 89/97 (91%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MT MLDILED+ D EGYKYERIDG+ITG RQ++IDR+NAPGA QFVFLLSTR+GGL
Sbjct: 962 FSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQDAIDRYNAPGAKQFVFLLSTRAGGL 1021
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
GINLATADTVIIYDSDWNPHNDIQAFSRAHR+GQ++K
Sbjct: 1022 GINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHK 1058
Score = 376 (137.4 bits), Expect = 1.2e-203, Sum P(5) = 1.2e-203
Identities = 71/92 (77%), Positives = 83/92 (90%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATADTVIIYDSDWNPHNDIQAFSRAHR+GQ++KVMIYRFVT+ SVEER+T VAK+KM
Sbjct: 1023 INLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKGSVEERITSVAKKKM 1082
Query: 802 MLTHLVVRPGMGGKQA-NFTKQELDDILRFGT 832
+LTHLVVR G+G K + +K ELDD+LR+GT
Sbjct: 1083 LLTHLVVRAGLGAKDGKSMSKTELDDVLRWGT 1114
Score = 148 (57.2 bits), Expect = 2.5e-209, Sum P(5) = 2.5e-209
Identities = 27/42 (64%), Positives = 32/42 (76%)
Query: 848 IIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQ 889
+IK+ E QDP YW KLL+HHYEQ QE + LGKGKRVR+Q
Sbjct: 1201 VIKEGTEEQDPNYWEKLLKHHYEQDQETELQKLGKGKRVRRQ 1242
Score = 144 (55.7 bits), Expect = 2.5e-209, Sum P(5) = 2.5e-209
Identities = 28/43 (65%), Positives = 38/43 (88%)
Query: 941 LNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRL 983
L QL++LLSD+K+DV+RLPAT++++ PV +RL MSER ILSRL
Sbjct: 1645 LAQLDDLLSDLKTDVARLPATISQVRPVTERLQMSERQILSRL 1687
Score = 143 (55.4 bits), Expect = 3.0e-69, Sum P(6) = 3.0e-69
Identities = 24/59 (40%), Positives = 39/59 (66%)
Query: 587 HRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFY 645
++YG+KPEW+ +R+IN + YLVKW++L Y+ ATWE ++ DI +++I Y
Sbjct: 492 YQYGVKPEWMQIHRIINHLSYAKSQQDYLVKWKELSYEHATWERDDTDIANYEDAIIKY 550
Score = 74 (31.1 bits), Expect = 2.5e-209, Sum P(5) = 2.5e-209
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 914 KKKEMSKQERDRPLPPLLARVGGNIEVL 941
+++ ++ER LPPLLA+V G IEVL
Sbjct: 1285 EERRRRREERSEKLPPLLAKVNGQIEVL 1312
Score = 41 (19.5 bits), Expect = 3.0e-69, Sum P(6) = 3.0e-69
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 158 YLVKWRDLPYDKATWEDE 175
+ VKW+ L Y + W E
Sbjct: 427 FFVKWKYLAYWQCEWLSE 444
Score = 41 (19.5 bits), Expect = 9.5e-59, Sum P(5) = 9.5e-59
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 614 YLVKWRDLPYDKATWEDE 631
+ VKW+ L Y + W E
Sbjct: 427 FFVKWKYLAYWQCEWLSE 444
>UNIPROTKB|Q22516 [details] [associations]
symbol:chd-3 "Chromodomain-helicase-DNA-binding protein 3
homolog" species:6239 "Caenorhabditis elegans" [GO:0032508 "DNA
duplex unwinding" evidence=ISS] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003682 GO:GO:0006338 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0001709 GO:GO:0046580
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598 GO:GO:0000118
GeneTree:ENSGT00560000076896 EMBL:AF308444 EMBL:Z67884 EMBL:Z67881
PIR:T20160 RefSeq:NP_510140.1 UniGene:Cel.16950
ProteinModelPortal:Q22516 SMR:Q22516 STRING:Q22516 PaxDb:Q22516
EnsemblMetazoa:T14G8.1 GeneID:181421 KEGG:cel:CELE_T14G8.1
UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1 HOGENOM:HOG000231124
InParanoid:Q22516 OMA:INIIMEL NextBio:913870 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 Uniprot:Q22516
Length = 1787
Score = 1291 (459.5 bits), Expect = 2.5e-209, Sum P(5) = 2.5e-209
Identities = 259/484 (53%), Positives = 331/484 (68%)
Query: 116 LNRHNINDE--ELEKKYYRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWE 173
L+RH+ + + +L +++Y+YG+KPEW+ +R+IN + YLVKW++L Y+ ATWE
Sbjct: 475 LSRHHSDHDPYKLRERFYQYGVKPEWMQIHRIINHLSYAKSQQDYLVKWKELSYEHATWE 534
Query: 174 DENEDIPGLKESIEFYNXXXXXXXXXXXXXELQE---DEDGASGSKPRR--YTPPPEK-P 227
++ DI +++I Y +Q+ + A G P+ T +K
Sbjct: 535 RDDTDIANYEDAIIKYWHHRERMLNDEVPRNVQKMIAKQREAKGLGPKEDEVTSRRKKRE 594
Query: 228 TTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITF 287
D+ KKYE QP F+ +TG LH YQLEGINWLR+ W D ILADEMGLGKT+Q++TF
Sbjct: 595 KIDILKKYEVQPDFISETGGNLHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTF 654
Query: 288 LYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWE 347
LY+L KEGH KGPFL++APLSTIINWERE E W PDFYVVTYVGD++ R+V+R+H+ S+
Sbjct: 655 LYTLMKEGHTKGPFLIAAPLSTIINWEREAELWCPDFYVVTYVGDRESRMVIREHEFSFV 714
Query: 348 DTANRGG-KPCRIRS-STVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSK 405
D A RGG K +I++ +KFHVLLTSYE I D A+L SI+WA LVVDEAHRLK+NQS
Sbjct: 715 DGAVRGGPKVSKIKTLENLKFHVLLTSYECINMDKAILSSIDWAALVVDEAHRLKNNQST 774
Query: 406 FFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVK 465
FFK L Y+IQ ++LLTGTP P++FN L SF AEF++ISKE+Q++
Sbjct: 775 FFKNLREYNIQYRVLLTGTPLQNNLEELFHLLNFLAPDRFNQLESFTAEFSEISKEDQIE 834
Query: 466 RLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQ 525
+LH+LLGPHMLRRLKADVL MPSK E IVRVELS MQKKYYK ILTRNF+ALN K GG
Sbjct: 835 KLHNLLGPHMLRRLKADVLTGMPSKQELIVRVELSAMQKKYYKNILTRNFDALNVKNGGT 894
Query: 526 QVSLLNIMMDLKKCCNHPYLFPAAAEEAP-VQGGQYEIQALTRAAGXXXXXXXXXXXXXE 584
Q+SL+NI+M+LKKCCNHPYLF A EAP ++ G YE AL + AG +
Sbjct: 895 QMSLINIIMELKKCCNHPYLFMKACLEAPKLKNGMYEGSALIKNAGKFVLLQKMLRKLKD 954
Query: 585 DGHR 588
GHR
Sbjct: 955 GGHR 958
Score = 430 (156.4 bits), Expect = 2.5e-209, Sum P(5) = 2.5e-209
Identities = 80/97 (82%), Positives = 89/97 (91%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MT MLDILED+ D EGYKYERIDG+ITG RQ++IDR+NAPGA QFVFLLSTR+GGL
Sbjct: 962 FSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQDAIDRYNAPGAKQFVFLLSTRAGGL 1021
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
GINLATADTVIIYDSDWNPHNDIQAFSRAHR+GQ++K
Sbjct: 1022 GINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHK 1058
Score = 376 (137.4 bits), Expect = 1.2e-203, Sum P(5) = 1.2e-203
Identities = 71/92 (77%), Positives = 83/92 (90%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATADTVIIYDSDWNPHNDIQAFSRAHR+GQ++KVMIYRFVT+ SVEER+T VAK+KM
Sbjct: 1023 INLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKGSVEERITSVAKKKM 1082
Query: 802 MLTHLVVRPGMGGKQA-NFTKQELDDILRFGT 832
+LTHLVVR G+G K + +K ELDD+LR+GT
Sbjct: 1083 LLTHLVVRAGLGAKDGKSMSKTELDDVLRWGT 1114
Score = 148 (57.2 bits), Expect = 2.5e-209, Sum P(5) = 2.5e-209
Identities = 27/42 (64%), Positives = 32/42 (76%)
Query: 848 IIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQ 889
+IK+ E QDP YW KLL+HHYEQ QE + LGKGKRVR+Q
Sbjct: 1201 VIKEGTEEQDPNYWEKLLKHHYEQDQETELQKLGKGKRVRRQ 1242
Score = 144 (55.7 bits), Expect = 2.5e-209, Sum P(5) = 2.5e-209
Identities = 28/43 (65%), Positives = 38/43 (88%)
Query: 941 LNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRL 983
L QL++LLSD+K+DV+RLPAT++++ PV +RL MSER ILSRL
Sbjct: 1645 LAQLDDLLSDLKTDVARLPATISQVRPVTERLQMSERQILSRL 1687
Score = 143 (55.4 bits), Expect = 3.0e-69, Sum P(6) = 3.0e-69
Identities = 24/59 (40%), Positives = 39/59 (66%)
Query: 587 HRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFY 645
++YG+KPEW+ +R+IN + YLVKW++L Y+ ATWE ++ DI +++I Y
Sbjct: 492 YQYGVKPEWMQIHRIINHLSYAKSQQDYLVKWKELSYEHATWERDDTDIANYEDAIIKY 550
Score = 74 (31.1 bits), Expect = 2.5e-209, Sum P(5) = 2.5e-209
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 914 KKKEMSKQERDRPLPPLLARVGGNIEVL 941
+++ ++ER LPPLLA+V G IEVL
Sbjct: 1285 EERRRRREERSEKLPPLLAKVNGQIEVL 1312
Score = 41 (19.5 bits), Expect = 3.0e-69, Sum P(6) = 3.0e-69
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 158 YLVKWRDLPYDKATWEDE 175
+ VKW+ L Y + W E
Sbjct: 427 FFVKWKYLAYWQCEWLSE 444
Score = 41 (19.5 bits), Expect = 9.5e-59, Sum P(5) = 9.5e-59
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 614 YLVKWRDLPYDKATWEDE 631
+ VKW+ L Y + W E
Sbjct: 427 FFVKWKYLAYWQCEWLSE 444
>UNIPROTKB|K7EMY3 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AL031847 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AL035406
HGNC:HGNC:16816 Ensembl:ENST00000462991 Uniprot:K7EMY3
Length = 1060
Score = 1294 (460.6 bits), Expect = 6.2e-203, Sum P(4) = 6.2e-203
Identities = 260/430 (60%), Positives = 307/430 (71%)
Query: 167 YDKATWEDENEDIP---GLKESIEFYNXXXXXXXXXXXXXELQEDEDGASGSKPR--RYT 221
YD+ TWE ++ DIP LK++ + L++ G K R +
Sbjct: 2 YDQCTWEIDDIDIPYYDNLKQAYWGHRELMLGEDTRLPKRLLKK------GKKLRDDKQE 55
Query: 222 PPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKT 281
PP+ P D K++KQP ++D TG LH YQLEG+NWLR+SW Q DTILADEMGLGKT
Sbjct: 56 KPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKT 115
Query: 282 IQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRD 341
+QTI FLYSL+KEGH KGP+LVSAPLSTIINWEREFE WAPDFYVVTY GDK+ R V+R+
Sbjct: 116 VQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRE 175
Query: 342 HDISWEDTANRGGKPC-RIRSST-VKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRL 399
++ S+ED A R GK R++ +KFHVLLTSYELIT D A+LGSIEWA LVVDEAHRL
Sbjct: 176 NEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRL 235
Query: 400 KSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADIS 459
K+NQSKFF+ L+ Y I KLLLTGTP TPE+FN+L F EFADIS
Sbjct: 236 KNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADIS 295
Query: 460 KEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALN 519
KE+Q+K+LHDLLGPHMLRRLKADV KNMP+K+E IVRVELS MQKKYYK+ILTRNFEALN
Sbjct: 296 KEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALN 355
Query: 520 PKGGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAPV-QGGQYEIQALTRAAGXXXXXXXX 578
KGGG QVSLLNIMMDLKKCCNHPYLFP AA EAPV G Y+ +L +++G
Sbjct: 356 SKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKM 415
Query: 579 XXXXXEDGHR 588
++GHR
Sbjct: 416 LKKLRDEGHR 425
Score = 437 (158.9 bits), Expect = 6.2e-203, Sum P(4) = 6.2e-203
Identities = 82/97 (84%), Positives = 88/97 (90%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MTKMLD+LED+L+ EGYKYERIDG ITG +RQE+IDRFNAPGA QF FLLSTR+GGL
Sbjct: 429 FSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGL 488
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ K
Sbjct: 489 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKK 525
Score = 418 (152.2 bits), Expect = 6.2e-201, Sum P(4) = 6.2e-201
Identities = 80/91 (87%), Positives = 84/91 (92%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ KVMIYRFVTR SVEER+TQVAKRKM
Sbjct: 490 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKM 549
Query: 802 MLTHLVVRPGMGGKQANFTKQELDDILRFGT 832
MLTHLVVRPG+G K + TKQELDDIL+FGT
Sbjct: 550 MLTHLVVRPGLGSKSGSMTKQELDDILKFGT 580
Score = 173 (66.0 bits), Expect = 6.2e-203, Sum P(4) = 6.2e-203
Identities = 33/42 (78%), Positives = 36/42 (85%)
Query: 848 IIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQ 889
IIKQE EN DP YW KLLRHHYEQ QED++R LGKGKR+RKQ
Sbjct: 691 IIKQE-ENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQ 731
Score = 111 (44.1 bits), Expect = 6.2e-203, Sum P(4) = 6.2e-203
Identities = 22/34 (64%), Positives = 29/34 (85%)
Query: 908 TGRRSAKKKEMSKQERDRPLPPLLARVGGNIEVL 941
+GRR ++++ K +RD+PLPPLLARVGGNIEVL
Sbjct: 774 SGRRQSRRQ--LKSDRDKPLPPLLARVGGNIEVL 805
Score = 49 (22.3 bits), Expect = 5.4e-58, Sum P(4) = 5.4e-58
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 623 YDKATWEDENEDIP 636
YD+ TWE ++ DIP
Sbjct: 2 YDQCTWEIDDIDIP 15
>WB|WBGene00002637 [details] [associations]
symbol:let-418 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IGI] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0016581 "NuRD complex"
evidence=ISS] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 1280 (455.6 bits), Expect = 8.2e-202, Sum P(5) = 8.2e-202
Identities = 254/478 (53%), Positives = 327/478 (68%)
Query: 119 HNINDE-ELEKKYYRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENE 177
H+ ND +L +++Y+YGIKPEW+ +R+IN ++ YLVKW++L YD+ATWE ++
Sbjct: 467 HSDNDPYKLRERFYQYGIKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDS 526
Query: 178 DIPGLKESIEFYNXXXXXXXXXXXXXELQE---DEDGASGSKPRRYTPPPEK-PTTDLRK 233
+I +E+I Y +Q+ A G P+ +K D+RK
Sbjct: 527 NIANYEEAIIKYWQHRESKLNEDIPKNVQKMIAKHREAKGLPPKEDEKKKKKREKIDIRK 586
Query: 234 KYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFK 293
KYE QP ++ +TG +LH YQLEG+NWLR+ W D ILADEMGLGKT+Q++TFLYSL K
Sbjct: 587 KYEVQPDYVTETGGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMK 646
Query: 294 EGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRG 353
EGHCKGPFL++APLSTIINWERE E W PDFYVVTYVG +D R+VLR+H+ S+ + A R
Sbjct: 647 EGHCKGPFLIAAPLSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRS 706
Query: 354 G-KPCRIRSS-TVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLS 411
G K +++++ +KFHVLLTSYE I D +L SIEW LVVDEAHRLK+NQS FFK L+
Sbjct: 707 GPKASKMKTTENMKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLN 766
Query: 412 GYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLL 471
Y+I ++LLTGTP + E+FN L +F AEF +ISKE+Q+++LH+LL
Sbjct: 767 EYTIHYRVLLTGTPLQNNLEELFHLLNFLSKERFNQLEAFTAEFNEISKEDQIEKLHNLL 826
Query: 472 GPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLN 531
GPHMLRRLKADVL MPSKSE IVRVELS MQKK+YK ILTRNF+ALN K GG Q+SL+N
Sbjct: 827 GPHMLRRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMN 886
Query: 532 IMMDLKKCCNHPYLFPAAAEEAPVQ-GGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
++M+LKKCCNHPYLF A EAP + G YE AL + +G + GHR
Sbjct: 887 VLMELKKCCNHPYLFVKAELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHR 944
Score = 418 (152.2 bits), Expect = 8.2e-202, Sum P(5) = 8.2e-202
Identities = 76/97 (78%), Positives = 89/97 (91%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MT+MLDI+ED + EGY+YERIDG+I G MRQ++IDR+NAPGA QF+FLLSTR+GGL
Sbjct: 948 FSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGL 1007
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
GINLATADTVIIYDSDWNPHNDIQAFSRAHR+GQ++K
Sbjct: 1008 GINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHK 1044
Score = 375 (137.1 bits), Expect = 2.7e-197, Sum P(5) = 2.7e-197
Identities = 70/92 (76%), Positives = 83/92 (90%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATADTVIIYDSDWNPHNDIQAFSRAHR+GQ++KVMIYRFVT+ SVEE++T VAK+KM
Sbjct: 1009 INLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKM 1068
Query: 802 MLTHLVVRPGMGGKQAN-FTKQELDDILRFGT 832
+L HLVVR G+GGK+ +K ELDD+LR+GT
Sbjct: 1069 LLNHLVVRAGLGGKEGKTMSKTELDDVLRWGT 1100
Score = 153 (58.9 bits), Expect = 4.1e-66, Sum P(6) = 4.1e-66
Identities = 28/70 (40%), Positives = 45/70 (64%)
Query: 587 HRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYN 646
++YGIKPEW+ +R+IN ++ YLVKW++L YD+ATWE ++ +I +E+I Y
Sbjct: 480 YQYGIKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDSNIANYEEAIIKYW 539
Query: 647 MTKMLDILED 656
+ + ED
Sbjct: 540 QHRESKLNED 549
Score = 138 (53.6 bits), Expect = 8.2e-202, Sum P(5) = 8.2e-202
Identities = 25/42 (59%), Positives = 32/42 (76%)
Query: 848 IIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQ 889
+IK++ + DP YW KLL+HHYEQ +E + LGKGKRVRKQ
Sbjct: 1188 VIKEDEKEPDPDYWEKLLKHHYEQDREIELQKLGKGKRVRKQ 1229
Score = 135 (52.6 bits), Expect = 8.2e-202, Sum P(5) = 8.2e-202
Identities = 27/45 (60%), Positives = 37/45 (82%)
Query: 939 EVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRL 983
+ L QL+E+LSDMK+DVSRLP+T ++ V +RL+M+ER ILSRL
Sbjct: 1654 KTLVQLDEILSDMKADVSRLPSTFTQLATVTERLNMTERQILSRL 1698
Score = 64 (27.6 bits), Expect = 8.2e-202, Sum P(5) = 8.2e-202
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 917 EMSKQERDRP-LPPLLARVGGNIEVL 941
E K+ RD +PPL+A+V G +E+L
Sbjct: 1275 EKKKRRRDEEKMPPLMAKVNGQVEIL 1300
Score = 44 (20.5 bits), Expect = 4.1e-66, Sum P(6) = 4.1e-66
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 158 YLVKWRDLPYDKATWEDE 175
+ VKW+ L Y + +W E
Sbjct: 415 FFVKWKYLSYWQCSWVSE 432
Score = 44 (20.5 bits), Expect = 1.3e-54, Sum P(5) = 1.3e-54
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 614 YLVKWRDLPYDKATWEDE 631
+ VKW+ L Y + +W E
Sbjct: 415 FFVKWKYLSYWQCSWVSE 432
>UNIPROTKB|G5EBZ4 [details] [associations]
symbol:let-418 "Protein let-418" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 1280 (455.6 bits), Expect = 8.2e-202, Sum P(5) = 8.2e-202
Identities = 254/478 (53%), Positives = 327/478 (68%)
Query: 119 HNINDE-ELEKKYYRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENE 177
H+ ND +L +++Y+YGIKPEW+ +R+IN ++ YLVKW++L YD+ATWE ++
Sbjct: 467 HSDNDPYKLRERFYQYGIKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDS 526
Query: 178 DIPGLKESIEFYNXXXXXXXXXXXXXELQE---DEDGASGSKPRRYTPPPEK-PTTDLRK 233
+I +E+I Y +Q+ A G P+ +K D+RK
Sbjct: 527 NIANYEEAIIKYWQHRESKLNEDIPKNVQKMIAKHREAKGLPPKEDEKKKKKREKIDIRK 586
Query: 234 KYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFK 293
KYE QP ++ +TG +LH YQLEG+NWLR+ W D ILADEMGLGKT+Q++TFLYSL K
Sbjct: 587 KYEVQPDYVTETGGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMK 646
Query: 294 EGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRG 353
EGHCKGPFL++APLSTIINWERE E W PDFYVVTYVG +D R+VLR+H+ S+ + A R
Sbjct: 647 EGHCKGPFLIAAPLSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRS 706
Query: 354 G-KPCRIRSS-TVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLS 411
G K +++++ +KFHVLLTSYE I D +L SIEW LVVDEAHRLK+NQS FFK L+
Sbjct: 707 GPKASKMKTTENMKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLN 766
Query: 412 GYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLL 471
Y+I ++LLTGTP + E+FN L +F AEF +ISKE+Q+++LH+LL
Sbjct: 767 EYTIHYRVLLTGTPLQNNLEELFHLLNFLSKERFNQLEAFTAEFNEISKEDQIEKLHNLL 826
Query: 472 GPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLN 531
GPHMLRRLKADVL MPSKSE IVRVELS MQKK+YK ILTRNF+ALN K GG Q+SL+N
Sbjct: 827 GPHMLRRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMN 886
Query: 532 IMMDLKKCCNHPYLFPAAAEEAPVQ-GGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
++M+LKKCCNHPYLF A EAP + G YE AL + +G + GHR
Sbjct: 887 VLMELKKCCNHPYLFVKAELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHR 944
Score = 418 (152.2 bits), Expect = 8.2e-202, Sum P(5) = 8.2e-202
Identities = 76/97 (78%), Positives = 89/97 (91%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MT+MLDI+ED + EGY+YERIDG+I G MRQ++IDR+NAPGA QF+FLLSTR+GGL
Sbjct: 948 FSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGL 1007
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
GINLATADTVIIYDSDWNPHNDIQAFSRAHR+GQ++K
Sbjct: 1008 GINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHK 1044
Score = 375 (137.1 bits), Expect = 2.7e-197, Sum P(5) = 2.7e-197
Identities = 70/92 (76%), Positives = 83/92 (90%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATADTVIIYDSDWNPHNDIQAFSRAHR+GQ++KVMIYRFVT+ SVEE++T VAK+KM
Sbjct: 1009 INLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKM 1068
Query: 802 MLTHLVVRPGMGGKQAN-FTKQELDDILRFGT 832
+L HLVVR G+GGK+ +K ELDD+LR+GT
Sbjct: 1069 LLNHLVVRAGLGGKEGKTMSKTELDDVLRWGT 1100
Score = 153 (58.9 bits), Expect = 4.1e-66, Sum P(6) = 4.1e-66
Identities = 28/70 (40%), Positives = 45/70 (64%)
Query: 587 HRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYN 646
++YGIKPEW+ +R+IN ++ YLVKW++L YD+ATWE ++ +I +E+I Y
Sbjct: 480 YQYGIKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDSNIANYEEAIIKYW 539
Query: 647 MTKMLDILED 656
+ + ED
Sbjct: 540 QHRESKLNED 549
Score = 138 (53.6 bits), Expect = 8.2e-202, Sum P(5) = 8.2e-202
Identities = 25/42 (59%), Positives = 32/42 (76%)
Query: 848 IIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQ 889
+IK++ + DP YW KLL+HHYEQ +E + LGKGKRVRKQ
Sbjct: 1188 VIKEDEKEPDPDYWEKLLKHHYEQDREIELQKLGKGKRVRKQ 1229
Score = 135 (52.6 bits), Expect = 8.2e-202, Sum P(5) = 8.2e-202
Identities = 27/45 (60%), Positives = 37/45 (82%)
Query: 939 EVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRL 983
+ L QL+E+LSDMK+DVSRLP+T ++ V +RL+M+ER ILSRL
Sbjct: 1654 KTLVQLDEILSDMKADVSRLPSTFTQLATVTERLNMTERQILSRL 1698
Score = 64 (27.6 bits), Expect = 8.2e-202, Sum P(5) = 8.2e-202
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 917 EMSKQERDRP-LPPLLARVGGNIEVL 941
E K+ RD +PPL+A+V G +E+L
Sbjct: 1275 EKKKRRRDEEKMPPLMAKVNGQVEIL 1300
Score = 44 (20.5 bits), Expect = 4.1e-66, Sum P(6) = 4.1e-66
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 158 YLVKWRDLPYDKATWEDE 175
+ VKW+ L Y + +W E
Sbjct: 415 FFVKWKYLSYWQCSWVSE 432
Score = 44 (20.5 bits), Expect = 1.3e-54, Sum P(5) = 1.3e-54
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 614 YLVKWRDLPYDKATWEDE 631
+ VKW+ L Y + +W E
Sbjct: 415 FFVKWKYLSYWQCSWVSE 432
>UNIPROTKB|J9NRN3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 EMBL:AAEX03003895
EMBL:AAEX03003896 EMBL:AAEX03003897 Ensembl:ENSCAFT00000044104
Uniprot:J9NRN3
Length = 1195
Score = 1449 (515.1 bits), Expect = 3.0e-192, Sum P(2) = 3.0e-192
Identities = 287/515 (55%), Positives = 353/515 (68%)
Query: 77 LEVYHPQLLKSYMKKMNNDFTXXXXXXXXXXXXXKRMARLNRHNINDEELEKKYYRYGIK 136
LE+YH + ++Y +K + D K R N+ + ++E+++YRYGIK
Sbjct: 505 LELYHTVMYRNYQRKNDMD-EPPPFDYGSGDEDGKSEKRKNKDPLY-AKMEERFYRYGIK 562
Query: 137 PEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNXXXXXX 196
PEW++ +R++N + G YL+KW+DLPYD+ TWE ++ DIP + Y
Sbjct: 563 PEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYDNLKQAYWGHRELM 622
Query: 197 XXXXXXXELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEG 256
+ + G K + PP+ P D K++KQP ++D TG LH YQLEG
Sbjct: 623 LGEDARLPKRLVKKGKK-LKDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEG 681
Query: 257 INWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWERE 316
+NWLR+SW Q DTILADEMGLGKT+QTI FLYSL+KEGH KGP+LVSAPLSTIINWERE
Sbjct: 682 LNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWERE 741
Query: 317 FETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPC-RIRSST-VKFHVLLTSYE 374
FE WAPDFYVVTY GDK+ R V+R+++ S+ED A R GK R++ +KFHVLLTSYE
Sbjct: 742 FEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYE 801
Query: 375 LITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXX 434
LIT D A+LGSIEWA LVVDEAHRLK+NQSKFF+ L+ Y I KLLLTGTP
Sbjct: 802 LITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELF 861
Query: 435 XXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFI 494
TPE+FN+L F EFADISKE+Q+K+LHDLLGPHMLRRLKADV KNMP+K+E I
Sbjct: 862 HLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELI 921
Query: 495 VRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAP 554
VRVELS MQKKYYK+ILTRNFEALN KGGG QVSLLNIMMDLKKCCNHPYLFP AA EAP
Sbjct: 922 VRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAP 981
Query: 555 V-QGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
V G Y+ +L +++G ++GHR
Sbjct: 982 VLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHR 1016
Score = 436 (158.5 bits), Expect = 3.0e-192, Sum P(2) = 3.0e-192
Identities = 83/98 (84%), Positives = 90/98 (91%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MTKMLD+LED+L+ EGYKYERIDG ITG +RQE+IDRFNAPGA QF FLLSTR+GGL
Sbjct: 1020 FSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGL 1079
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKY 741
GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ NK+
Sbjct: 1080 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ-NKW 1116
Score = 180 (68.4 bits), Expect = 3.5e-165, Sum P(2) = 3.5e-165
Identities = 37/44 (84%), Positives = 38/44 (86%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVT 785
INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ NK R+ T
Sbjct: 1081 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ-NKWPRRRWAT 1123
Score = 166 (63.5 bits), Expect = 1.1e-48, Sum P(3) = 1.1e-48
Identities = 26/50 (52%), Positives = 38/50 (76%)
Query: 587 HRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIP 636
+RYGIKPEW++ +R++N + G YL+KW+DLPYD+ TWE ++ DIP
Sbjct: 557 YRYGIKPEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIP 606
Score = 40 (19.1 bits), Expect = 1.1e-48, Sum P(3) = 1.1e-48
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 158 YLVKWRDLPYDKATWEDE 175
+ VKW L Y +W E
Sbjct: 485 FFVKWAGLSYWHCSWVKE 502
Score = 40 (19.1 bits), Expect = 4.0e-36, Sum P(2) = 4.0e-36
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 614 YLVKWRDLPYDKATWEDE 631
+ VKW L Y +W E
Sbjct: 485 FFVKWAGLSYWHCSWVKE 502
>UNIPROTKB|F2Z2R5 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 EMBL:AL035406 HGNC:HGNC:16816
ChiTaRS:CHD5 IPI:IPI00444866 ProteinModelPortal:F2Z2R5 SMR:F2Z2R5
Ensembl:ENST00000496404 ArrayExpress:F2Z2R5 Bgee:F2Z2R5
Uniprot:F2Z2R5
Length = 1225
Score = 1447 (514.4 bits), Expect = 1.3e-191, Sum P(2) = 1.3e-191
Identities = 290/520 (55%), Positives = 358/520 (68%)
Query: 77 LEVYHPQLLKSYMKKMNNDFTXXXXXXXXXXXXXKRMARLNRHNINDEELEKKYYRYGIK 136
LE+YH + ++Y +K + D K R N+ + ++E+++YRYGIK
Sbjct: 531 LELYHTVMYRNYQRKNDMD-EPPPFDYGSGDEDGKSEKRKNKDPLY-AKMEERFYRYGIK 588
Query: 137 PEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIP---GLKESIEFYNXXX 193
PEW++ +R++N + G YL+KW+DLPYD+ TWE ++ DIP LK++ +
Sbjct: 589 PEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYDNLKQAYWGHRELM 648
Query: 194 XXXXXXXXXXELQEDEDGASGSKPR--RYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHA 251
L++ G K R + PP+ P D K++KQP ++D TG LH
Sbjct: 649 LGEDTRLPKRLLKK------GKKLRDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHP 702
Query: 252 YQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTII 311
YQLEG+NWLR+SW Q DTILADEMGLGKT+QTI FLYSL+KEGH KGP+LVSAPLSTII
Sbjct: 703 YQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTII 762
Query: 312 NWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPC-RIRSST-VKFHVL 369
NWEREFE WAPDFYVVTY GDK+ R V+R+++ S+ED A R GK R++ +KFHVL
Sbjct: 763 NWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVL 822
Query: 370 LTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXX 429
LTSYELIT D A+LGSIEWA LVVDEAHRLK+NQSKFF+ L+ Y I KLLLTGTP
Sbjct: 823 LTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNN 882
Query: 430 XXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPS 489
TPE+FN+L F EFADISKE+Q+K+LHDLLGPHMLRRLKADV KNMP+
Sbjct: 883 LEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPA 942
Query: 490 KSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAA 549
K+E IVRVELS MQKKYYK+ILTRNFEALN KGGG QVSLLNIMMDLKKCCNHPYLFP A
Sbjct: 943 KTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVA 1002
Query: 550 AEEAPV-QGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
A EAPV G Y+ +L +++G ++GHR
Sbjct: 1003 AVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHR 1042
Score = 432 (157.1 bits), Expect = 1.3e-191, Sum P(2) = 1.3e-191
Identities = 81/94 (86%), Positives = 87/94 (92%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MTKMLD+LED+L+ EGYKYERIDG ITG +RQE+IDRFNAPGA QF FLLSTR+GGL
Sbjct: 1046 FSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGL 1105
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ 737
GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ
Sbjct: 1106 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ 1139
Score = 177 (67.4 bits), Expect = 1.2e-164, Sum P(2) = 1.2e-164
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ 774
INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ
Sbjct: 1107 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ 1139
Score = 166 (63.5 bits), Expect = 3.6e-48, Sum P(3) = 3.6e-48
Identities = 26/50 (52%), Positives = 38/50 (76%)
Query: 587 HRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIP 636
+RYGIKPEW++ +R++N + G YL+KW+DLPYD+ TWE ++ DIP
Sbjct: 583 YRYGIKPEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIP 632
Score = 40 (19.1 bits), Expect = 3.6e-48, Sum P(3) = 3.6e-48
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 158 YLVKWRDLPYDKATWEDE 175
+ VKW L Y +W E
Sbjct: 511 FFVKWAGLSYWHCSWVKE 528
Score = 40 (19.1 bits), Expect = 7.7e-35, Sum P(3) = 7.7e-35
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 614 YLVKWRDLPYDKATWEDE 631
+ VKW L Y +W E
Sbjct: 511 FFVKWAGLSYWHCSWVKE 528
Score = 38 (18.4 bits), Expect = 5.9e-48, Sum P(3) = 5.9e-48
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 204 ELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQ 238
E +ED + S S+ Y+P +K L+ K EK+
Sbjct: 77 ENEEDLEEKSESEGSDYSPNKKKKKK-LKDKKEKK 110
>FB|FBgn0023395 [details] [associations]
symbol:Chd3 "Chd3" species:7227 "Drosophila melanogaster"
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS;NAS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:AE014296 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0006333
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 GeneTree:ENSGT00560000076896
InterPro:IPR009463 Pfam:PF06465 EMBL:AY071503 EMBL:AF007780
RefSeq:NP_649111.1 ProteinModelPortal:O16102 SMR:O16102
DIP:DIP-21327N MINT:MINT-1651376 STRING:O16102 PaxDb:O16102
EnsemblMetazoa:FBtr0074998 GeneID:40111 KEGG:dme:Dmel_CG9594
UCSC:CG9594-RA CTD:1107 FlyBase:FBgn0023395 InParanoid:O16102
OMA:IKWRDLA OrthoDB:EOG4JH9WN PhylomeDB:O16102 GenomeRNAi:40111
NextBio:817050 Bgee:O16102 GermOnline:CG9594 Uniprot:O16102
Length = 892
Score = 1209 (430.6 bits), Expect = 3.8e-191, Sum P(4) = 3.8e-191
Identities = 235/377 (62%), Positives = 278/377 (73%)
Query: 213 SGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTIL 272
S +K R+ P PT DL KKYE QP FL + G++LH +Q+EG++WLRYSWGQ I TIL
Sbjct: 233 SSNKGRQRDRPA--PTIDLNKKYEDQPVFLKEAGLKLHPFQIEGVSWLRYSWGQGIPTIL 290
Query: 273 ADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGD 332
ADEMGLGKTIQT+ FLYSLFKEGHC+GPFL+S PLST+ NWERE E WAP+ Y VTYVG
Sbjct: 291 ADEMGLGKTIQTVVFLYSLFKEGHCRGPFLISVPLSTLTNWERELELWAPELYCVTYVGG 350
Query: 333 KDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLV 392
K R V+R H+IS+E+ K R + KF+V+LTSYE I+ D A LG I+WA LV
Sbjct: 351 KTARAVIRKHEISFEEVTT---KTMRENQTQYKFNVMLTSYEFISVDAAFLGCIDWAALV 407
Query: 393 VDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQ 452
VDEAHRL+SNQSKFF+ LS Y I KLLLTGTP + KFNDL +FQ
Sbjct: 408 VDEAHRLRSNQSKFFRILSKYRIGYKLLLTGTPLQNNLEELFHLLNFLSSGKFNDLQTFQ 467
Query: 453 AEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILT 512
AEF D+SKEEQVKRLH++L PHMLRRLKADVLK+MP KSEFIVRVELS MQKK+YK+ILT
Sbjct: 468 AEFTDVSKEEQVKRLHEILEPHMLRRLKADVLKSMPPKSEFIVRVELSSMQKKFYKHILT 527
Query: 513 RNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAPVQ-GGQYEIQALTRAAGX 571
+NF+ALN KGGG+ SLLNIMMDL+KCCNHPYLFP+AAEEA + G YE+ +LT+A+G
Sbjct: 528 KNFKALNQKGGGRVCSLLNIMMDLRKCCNHPYLFPSAAEEATISPSGLYEMSSLTKASGK 587
Query: 572 XXXXXXXXXXXXEDGHR 588
D HR
Sbjct: 588 LDLLSKMLKQLKADNHR 604
Score = 406 (148.0 bits), Expect = 3.8e-191, Sum P(4) = 3.8e-191
Identities = 76/91 (83%), Positives = 83/91 (91%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATADTVII+DSDWNPHND+QAFSRAHR+GQ+ KVMIYRFVT NSVEER+ QVAK KM
Sbjct: 669 INLATADTVIIFDSDWNPHNDVQAFSRAHRMGQKKKVMIYRFVTHNSVEERIMQVAKHKM 728
Query: 802 MLTHLVVRPGMGGKQANFTKQELDDILRFGT 832
MLTHLVVRPGMGG NF+K EL+DILRFGT
Sbjct: 729 MLTHLVVRPGMGGMTTNFSKDELEDILRFGT 759
Score = 401 (146.2 bits), Expect = 1.3e-190, Sum P(4) = 1.3e-190
Identities = 83/158 (52%), Positives = 113/158 (71%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MTKML++LE +L+GEGY+Y+RIDG+I G +RQ++IDRFN P + FVFLLSTR+GGL
Sbjct: 608 FSQMTKMLNVLEHFLEGEGYQYDRIDGSIKGDLRQKAIDRFNDPVSEHFVFLLSTRAGGL 667
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDI 763
GINLATADTVII+DSDWNPHND+QAFSRAHR+GQ+ K V+IY + HN +
Sbjct: 668 GINLATADTVIIFDSDWNPHNDVQAFSRAHRMGQKKK---------VMIYR--FVTHNSV 716
Query: 764 QAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+ R ++ + +K+M+ V R + T +K ++
Sbjct: 717 E--ERIMQVAK-HKMMLTHLVVRPGMGGMTTNFSKDEL 751
Score = 208 (78.3 bits), Expect = 3.8e-191, Sum P(4) = 3.8e-191
Identities = 35/67 (52%), Positives = 49/67 (73%)
Query: 123 DEELEKKYYRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGL 182
D L +++YRYGIKPEWL+ RVIN +G T+YLVKWR+L Y+ ++WE E++ IPGL
Sbjct: 162 DGNLHERFYRYGIKPEWLLVQRVINHSEEPNGGTMYLVKWRELSYNDSSWERESDSIPGL 221
Query: 183 KESIEFY 189
++I Y
Sbjct: 222 NQAIALY 228
Score = 189 (71.6 bits), Expect = 1.1e-52, Sum P(3) = 1.1e-52
Identities = 32/59 (54%), Positives = 44/59 (74%)
Query: 587 HRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFY 645
+RYGIKPEWL+ RVIN +G T+YLVKWR+L Y+ ++WE E++ IPGL ++I Y
Sbjct: 170 YRYGIKPEWLLVQRVINHSEEPNGGTMYLVKWRELSYNDSSWERESDSIPGLNQAIALY 228
Score = 80 (33.2 bits), Expect = 3.8e-191, Sum P(4) = 3.8e-191
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 852 EAENQDPAYWVKLL-----------RHHYEQHQEDVSRTLGKGKRVRKQ 889
+AEN DP YW L+ + +Q Q DV +GKGKR+RK+
Sbjct: 823 DAENTDPFYWENLMGKSQPKLPKKQKKQSQQSQVDVESIMGKGKRIRKE 871
Score = 48 (22.0 bits), Expect = 5.4e-38, Sum P(3) = 5.4e-38
Identities = 17/76 (22%), Positives = 33/76 (43%)
Query: 595 WLIANRVINSKTLR-DGSTIYLVKWRDLPYDKATWEDENEDIPGLKESI-EFYNMTKMLD 652
W + +R + +T + + Y +KW + Y W E + + + F + M +
Sbjct: 94 WAL-DRSVELRTSKGEKRREYFIKWHGMSYWHCEWIPEGQMLLHHASMVASFQRRSDMEE 152
Query: 653 -ILEDYLDGEGYKYER 667
LE+ D +G +ER
Sbjct: 153 PSLEELDDQDGNLHER 168
Score = 48 (22.0 bits), Expect = 5.4e-38, Sum P(3) = 5.4e-38
Identities = 25/134 (18%), Positives = 51/134 (38%)
Query: 139 WLIANRVINSKTLR-DGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNXXXXXXX 197
W + +R + +T + + Y +KW + Y W E + + L + +
Sbjct: 94 WAL-DRSVELRTSKGEKRREYFIKWHGMSYWHCEWIPEGQML--LHHASMVASFQRRSDM 150
Query: 198 XXXXXXELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGI 257
EL +D+DG + RY PE + ++P G ++ + +
Sbjct: 151 EEPSLEEL-DDQDGNLHERFYRYGIKPEWLLVQRVINHSEEP-----NGGTMYLVKWREL 204
Query: 258 NWLRYSWGQNIDTI 271
++ SW + D+I
Sbjct: 205 SYNDSSWERESDSI 218
>TAIR|locus:2040184 [details] [associations]
symbol:PKL "PICKLE" species:3702 "Arabidopsis thaliana"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003678 "DNA helicase activity" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=IMP] [GO:0009733 "response to
auxin stimulus" evidence=IMP] [GO:2000023 "regulation of lateral
root development" evidence=IMP] [GO:0009788 "negative regulation of
abscisic acid mediated signaling pathway" evidence=IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0016246 "RNA interference" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0009739 "response to gibberellin
stimulus" evidence=IMP] [GO:0048364 "root development"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 Prosite:PS00518 GO:GO:0005524 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733
GO:GO:0046872 GO:GO:0003677 GO:GO:0008283 GO:GO:0008270
GO:GO:0016568 GO:GO:0048364 GO:GO:0009739 GO:GO:0009788
GO:GO:0009736 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOGENOM:HOG000231124 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
EMBL:AF185578 EMBL:AF185577 EMBL:AK229409 IPI:IPI00521160
PIR:T52301 RefSeq:NP_565587.1 UniGene:At.11745
ProteinModelPortal:Q9S775 SMR:Q9S775 STRING:Q9S775 PaxDb:Q9S775
PRIDE:Q9S775 EnsemblPlants:AT2G25170.1 GeneID:817055
KEGG:ath:AT2G25170 TAIR:At2g25170 InParanoid:Q9S775 OMA:NVVMYFG
PhylomeDB:Q9S775 ProtClustDB:CLSN2688404 Genevestigator:Q9S775
GermOnline:AT2G25170 GO:GO:2000023 Uniprot:Q9S775
Length = 1384
Score = 776 (278.2 bits), Expect = 2.6e-124, Sum P(4) = 2.6e-124
Identities = 173/391 (44%), Positives = 228/391 (58%)
Query: 204 ELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYS 263
E+Q +D S+ RR K ++++ P FL G+ LH YQLEG+N+LR+S
Sbjct: 233 EIQRFKD--VNSRTRRSKDVDHKRNPRDFQQFDHTPEFLK--GL-LHPYQLEGLNFLRFS 287
Query: 264 WGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPD 323
W + ILADEMGLGKTIQ+I L SLF+E P LV APLST+ NWEREF TWAP
Sbjct: 288 WSKQTHVILADEMGLGKTIQSIALLASLFEENLI--PHLVIAPLSTLRNWEREFATWAPQ 345
Query: 324 FYVVTYVGDKDCRIVLRDHD--ISWEDTANRGGKPCRIRSST----VKFHVLLTSYELIT 377
VV Y G R V+R+H+ +S + + K +I S + +KF VLLTSYE+I
Sbjct: 346 MNVVMYFGTAQARAVIREHEFYLSKDQKKIKKKKSGQISSESKQKRIKFDVLLTSYEMIN 405
Query: 378 NDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXX 437
D A+L I+W ++VDE HRLK+ SK F L+ YS +++LLTGTP
Sbjct: 406 LDSAVLKPIKWECMIVDEGHRLKNKDSKLFSSLTQYSSNHRILLTGTPLQNNLDELFMLM 465
Query: 438 XXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRV 497
KF L FQ EF DI++EEQ+ RLH +L PH+LRR+K DV+K+MP K E I+RV
Sbjct: 466 HFLDAGKFGSLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKDMPPKKELILRV 525
Query: 498 ELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAPVQG 557
+LS +QK+YYK I TRN++ L KGG Q +SL NIMM+L+K C HPY+ E +
Sbjct: 526 DLSSLQKEYYKAIFTRNYQVLTKKGGAQ-ISLNNIMMELRKVCCHPYMLEGV--EPVIHD 582
Query: 558 GQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
+ L + G E GHR
Sbjct: 583 ANEAFKQLLESCGKLQLLDKMMVKLKEQGHR 613
Score = 337 (123.7 bits), Expect = 2.6e-124, Sum P(4) = 2.6e-124
Identities = 63/91 (69%), Positives = 76/91 (83%)
Query: 650 MLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLAT 709
MLD+LEDY + ++YERIDG + G+ RQ IDRFNA +++F FLLSTR+GGLGINLAT
Sbjct: 623 MLDLLEDYCTHKKWQYERIDGKVGGAERQIRIDRFNAKNSNKFCFLLSTRAGGLGINLAT 682
Query: 710 ADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
ADTVIIYDSDWNPH D+QA +RAHR+GQ NK
Sbjct: 683 ADTVIIYDSDWNPHADLQAMARAHRLGQTNK 713
Score = 300 (110.7 bits), Expect = 2.0e-120, Sum P(4) = 2.0e-120
Identities = 58/91 (63%), Positives = 73/91 (80%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATADTVIIYDSDWNPH D+QA +RAHR+GQ NKVMIYR + R ++EER+ Q+ K+KM
Sbjct: 678 INLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIYRLINRGTIEERMMQLTKKKM 737
Query: 802 MLTHLVVRPGMGGKQANFTKQELDDILRFGT 832
+L HLVV G K N ++ELDDI+R+G+
Sbjct: 738 VLEHLVV--GKL-KTQNINQEELDDIIRYGS 765
Score = 103 (41.3 bits), Expect = 2.6e-124, Sum P(4) = 2.6e-124
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 135 IKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIE 187
I+PEW +R++ + DG YLVK+++L YD+ WE E+ DI + I+
Sbjct: 185 IRPEWTTVDRILACRE-EDGELEYLVKYKELSYDECYWESES-DISTFQNEIQ 235
Score = 103 (41.3 bits), Expect = 4.9e-37, Sum P(4) = 4.9e-37
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 591 IKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIE 643
I+PEW +R++ + DG YLVK+++L YD+ WE E+ DI + I+
Sbjct: 185 IRPEWTTVDRILACRE-EDGELEYLVKYKELSYDECYWESES-DISTFQNEIQ 235
Score = 89 (36.4 bits), Expect = 2.6e-124, Sum P(4) = 2.6e-124
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 850 KQEAENQDPA-YWVKLLRHHYEQHQEDVSRTLGKGKRVRKQ 889
K A N D A YW +LL+ +E HQ + LGK KR RKQ
Sbjct: 843 KSSAGNSDRASYWEELLKDKFELHQAEELNALGKRKRSRKQ 883
Score = 56 (24.8 bits), Expect = 2.3e-119, Sum P(4) = 2.3e-119
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 158 YLVKWRDLPYDKATWEDENE 177
YLVKW+ L Y +W E E
Sbjct: 131 YLVKWKGLSYLHCSWVPEKE 150
Score = 56 (24.8 bits), Expect = 5.2e-31, Sum P(3) = 5.2e-31
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 614 YLVKWRDLPYDKATWEDENE 633
YLVKW+ L Y +W E E
Sbjct: 131 YLVKWKGLSYLHCSWVPEKE 150
>ZFIN|ZDB-GENE-070912-179 [details] [associations]
symbol:chd7 "chromodomain helicase DNA binding
protein 7" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007368 "determination of left/right symmetry"
evidence=IMP] [GO:0001756 "somitogenesis" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0021602
"cranial nerve morphogenesis" evidence=IMP] [GO:0001947 "heart
looping" evidence=IMP] [GO:0030282 "bone mineralization"
evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
[GO:0014029 "neural crest formation" evidence=IMP]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 ZFIN:ZDB-GENE-070912-179 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0001756 GO:GO:0042472
GO:GO:0060041 GO:GO:0004386 GO:GO:0001947 GO:GO:0030282
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 GeneTree:ENSGT00560000077077
GO:GO:0021602 EMBL:CR450710 GO:GO:0014029 IPI:IPI00493585
Ensembl:ENSDART00000016208 Ensembl:ENSDART00000135230
Uniprot:F1QGL1
Length = 3140
Score = 681 (244.8 bits), Expect = 8.3e-112, Sum P(4) = 8.3e-112
Identities = 147/337 (43%), Positives = 203/337 (60%)
Query: 225 EKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQT 284
E+P T +K E + + L YQLEG+NWL ++W + ILADEMGLGKTIQ+
Sbjct: 990 ERPPTSDWQKSESSREYKNANA--LREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQS 1047
Query: 285 ITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 344
ITFLY ++ +G GPFLV APLSTI NWEREF TW + VV Y G + R ++ +++
Sbjct: 1048 ITFLYEIYLKG-IHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRKTIQAYEM 1105
Query: 345 SWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQS 404
+ DT +G RI KFH ++T++E+I D L ++ W +++DEAHRLK+
Sbjct: 1106 YYRDT--QG----RIIKGAYKFHAVITTFEMILTDCPELRNVPWRCVIIDEAHRLKNRNC 1159
Query: 405 KFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQV 464
K + L +++K+LLTGTP P++F ++F EF D+ EEQV
Sbjct: 1160 KLLEGLKMMDMEHKVLLTGTPLQNTVEELFSLLNFLEPDRFPSESTFMQEFGDLKTEEQV 1219
Query: 465 KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKG-- 522
++L +L P MLRRLK DV KN+ K E I+ VEL+ +QKKYY+ IL +NF L+ G
Sbjct: 1220 QKLQGILKPMMLRRLKEDVEKNLAPKEETIIEVELTNVQKKYYRAILEKNFAFLSKSGAG 1279
Query: 523 ------GGQQV-SLLNIMMDLKKCCNHPYLFPAAAEE 552
GG V +LLN MM+L+KCCNHPYL A E+
Sbjct: 1280 GGSGGGGGSNVPNLLNTMMELRKCCNHPYLINGAEEK 1316
Score = 326 (119.8 bits), Expect = 8.3e-112, Sum P(4) = 8.3e-112
Identities = 78/194 (40%), Positives = 116/194 (59%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M + LDILEDYL Y YERIDG + G++RQ +IDRF+ P + +FVFLL TR+GGL
Sbjct: 1364 FSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGL 1423
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDI 763
GINL ADT II+DSDWNP ND+QA +R HRIGQ +K + + T Y+ +
Sbjct: 1424 GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ-SKSVKIYRLITRNSYEREM------ 1476
Query: 764 QAFSRAH-RIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGG-------K 815
F +A ++G +K ++ R + V Q++K+++ ++R G G +
Sbjct: 1477 --FDKASLKLGL-DKAVLQSMSGRENAANGVQQLSKKEI---EDLLRKGAYGALMEEEDE 1530
Query: 816 QANFTKQELDDILR 829
+ F ++++D IL+
Sbjct: 1531 GSKFCEEDIDQILQ 1544
Score = 217 (81.4 bits), Expect = 2.2e-100, Sum P(4) = 2.2e-100
Identities = 52/116 (44%), Positives = 68/116 (58%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
P +D F R G INL ADT II+DSDWNP ND+QA +R HRIGQ V IY
Sbjct: 1407 PDSDRFVFLLCTRAGGLG--INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIY 1464
Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQ--AN----FTKQELDDILRFG 831
R +TRNS E + A K+ L V++ M G++ AN +K+E++D+LR G
Sbjct: 1465 RLITRNSYEREMFDKASLKLGLDKAVLQ-SMSGRENAANGVQQLSKKEIEDLLRKG 1519
Score = 124 (48.7 bits), Expect = 8.3e-112, Sum P(4) = 8.3e-112
Identities = 36/113 (31%), Positives = 56/113 (49%)
Query: 522 GGGQQV-SLLNIMMDLKKCCNHPYLFPAAAEEA--------PVQGGQYEIQALTRAAGXX 572
GGG V +LLN MM+L+KCCNHPYL A E+ P+ ++ +QA+ +AAG
Sbjct: 1285 GGGSNVPNLLNTMMELRKCCNHPYLINGAEEKIMEEFRETHPLDQPEFHLQAMIQAAGKL 1344
Query: 573 XXXXXXXXXXXEDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDK 625
GHR LI ++++ + + YL++ R PY++
Sbjct: 1345 VLIDKLLPKLKAGGHRV------LIFSQMVRCLDILED---YLIQ-RRYPYER 1387
Score = 86 (35.3 bits), Expect = 8.3e-112, Sum P(4) = 8.3e-112
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 137 PEWLIANRV--INSKTLRDGS--TIYLVKWRDLPYDKATWEDENEDIPGLK-ESIE 187
P+++ +RV ++ T +G T+YLVKW LPY+ +TWE + DI +K E E
Sbjct: 923 PDYVEVDRVLDVSESTDENGELVTLYLVKWCSLPYEDSTWELK-ADIDQVKIEEFE 977
Score = 86 (35.3 bits), Expect = 3.1e-27, Sum P(3) = 3.1e-27
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 593 PEWLIANRV--INSKTLRDGS--TIYLVKWRDLPYDKATWEDENEDIPGLK-ESIE 643
P+++ +RV ++ T +G T+YLVKW LPY+ +TWE + DI +K E E
Sbjct: 923 PDYVEVDRVLDVSESTDENGELVTLYLVKWCSLPYEDSTWELK-ADIDQVKIEEFE 977
Score = 47 (21.6 bits), Expect = 1.0e-107, Sum P(4) = 1.0e-107
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 210 DGASGSKPRRYTPPPEKP--TTDLRKKYEKQPPFLDDTGMQ 248
D SG+ ++ +P T+D+ K + P DD G+Q
Sbjct: 754 DSESGNSTKKEAKRKREPSVTSDVEKTPPQSPEEEDDDGVQ 794
Score = 40 (19.1 bits), Expect = 1.8e-22, Sum P(3) = 1.8e-22
Identities = 22/101 (21%), Positives = 40/101 (39%)
Query: 444 KFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQ 503
KF + +ADI + E+ KR+ ++R +A + S F+ ++ P
Sbjct: 873 KFKGFSYLHCRWADIEELEKDKRIQQ-----KIKRFRAK-----QALSTFVTEMDDEPFN 922
Query: 504 KKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPY 544
Y + + + G + V+L L K C+ PY
Sbjct: 923 PDYVEVDRVLDVSESTDENG-ELVTLY-----LVKWCSLPY 957
Score = 37 (18.1 bits), Expect = 1.5e-81, Sum P(4) = 1.5e-81
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 640 ESIEFYNMTKMLDILEDYLDGEGYKYERIDGNI 672
+S E N T +L+D L G + + ++G +
Sbjct: 3086 DSEESQNKTADSSVLDDDLAGPAEEMDSMEGGM 3118
>DICTYBASE|DDB_G0284171 [details] [associations]
symbol:DDB_G0284171 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 dictyBase:DDB_G0284171
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006357 EMBL:AAFI02000063 GO:GO:0004003 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR025260 Pfam:PF13907
KO:K11367 RefSeq:XP_638708.1 ProteinModelPortal:Q54Q16
STRING:Q54Q16 EnsemblProtists:DDB0220640 GeneID:8624452
KEGG:ddi:DDB_G0284171 InParanoid:Q54Q16 OMA:DINATEF
ProtClustDB:CLSZ2732060 Uniprot:Q54Q16
Length = 1917
Score = 778 (278.9 bits), Expect = 2.2e-111, Sum P(3) = 2.2e-111
Identities = 163/355 (45%), Positives = 222/355 (62%)
Query: 234 KYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFK 293
K + QP ++ G L YQ+EG+NWL +SW N + ILADEMGLGKTIQTI+FL LF
Sbjct: 742 KLDTQPSWIS-AGT-LRDYQMEGLNWLVHSWMNNTNVILADEMGLGKTIQTISFLSYLFN 799
Query: 294 EGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRG 353
E KGPFLV PLSTI NW+REF WAP V+ Y G R ++R ++ T NR
Sbjct: 800 EQDIKGPFLVVVPLSTIENWQREFAKWAPAMNVIVYTGTGQSRDIIRLYEFY---TTNRL 856
Query: 354 GKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGY 413
GK + F+VLLT+Y+ I D LG+I+W L VDEAHRLK+++S + L Y
Sbjct: 857 GK------KKLNFNVLLTTYDFILKDKNTLGTIKWEFLAVDEAHRLKNSESVLHEVLKLY 910
Query: 414 SIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGP 473
+ N+LL+TGTP P KF L FQ +++D+ + +Q+ +LH +L P
Sbjct: 911 NTTNRLLVTGTPLQNSLKELWNLLNFLMPNKFTSLKDFQDQYSDLKENDQIAQLHSVLKP 970
Query: 474 HMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIM 533
H+LRR+K DV K++P K+E I+RV+LS +QKKYYK+ILT+NF+ LN KG G++ +LLNIM
Sbjct: 971 HLLRRIKKDVEKSLPPKTERILRVDLSNVQKKYYKWILTKNFQELN-KGKGEKTTLLNIM 1029
Query: 534 MDLKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
+LKK CNHPYL+ A +E + G + + ++ RA+G E GHR
Sbjct: 1030 TELKKTCNHPYLYQNARDECEL-GAKDLLDSMIRASGKLVLLDKLLIRLKETGHR 1083
Score = 328 (120.5 bits), Expect = 2.2e-111, Sum P(3) = 2.2e-111
Identities = 59/101 (58%), Positives = 82/101 (81%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M +MLDIL DYL G ++++R+DG+++ R +++DRFNA + F FLLST++GGL
Sbjct: 1087 FSQMVRMLDILADYLKGRSFQFQRLDGSMSREKRSQAMDRFNAVDSPDFCFLLSTKAGGL 1146
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINL 744
GINL+TADTVII+DSDWNP ND+QA +RAHRIGQ+N ++N+
Sbjct: 1147 GINLSTADTVIIFDSDWNPQNDLQAEARAHRIGQKN-HVNI 1186
Score = 256 (95.2 bits), Expect = 8.1e-104, Sum P(3) = 8.1e-104
Identities = 54/99 (54%), Positives = 72/99 (72%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INL+TADTVII+DSDWNP ND+QA +RAHRIGQ+N V IYR V+++SVEE + + AK+KM
Sbjct: 1148 INLSTADTVIIFDSDWNPQNDLQAEARAHRIGQKNHVNIYRLVSKSSVEEDILERAKQKM 1207
Query: 802 MLTHLVVRPGMGGKQAN---------FTKQELDDILRFG 831
+L HLV++ + A F K+EL+ IL+FG
Sbjct: 1208 VLDHLVIQTMEKSQTAKSNTPNNSNVFNKEELEAILKFG 1246
Score = 68 (29.0 bits), Expect = 2.2e-111, Sum P(3) = 2.2e-111
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 158 YLVKWRDLPYDKATWEDENEDIPGLKESIEFY 189
YLVKW+ L Y + TWE EDI + I+ +
Sbjct: 683 YLVKWKVLAYSEVTWEYP-EDIAEFQTEIDTF 713
Score = 68 (29.0 bits), Expect = 1.9e-26, Sum P(3) = 1.9e-26
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 614 YLVKWRDLPYDKATWEDENEDIPGLKESIEFY 645
YLVKW+ L Y + TWE EDI + I+ +
Sbjct: 683 YLVKWKVLAYSEVTWEYP-EDIAEFQTEIDTF 713
Score = 61 (26.5 bits), Expect = 8.4e-28, Sum P(3) = 8.4e-28
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 607 LRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKML 651
L+D +T+ +KW L D+A +E + L E ++ YN T L
Sbjct: 874 LKDKNTLGTIKWEFLAVDEAHRLKNSESV--LHEVLKLYNTTNRL 916
Score = 59 (25.8 bits), Expect = 7.2e-17, Sum P(3) = 7.2e-17
Identities = 22/71 (30%), Positives = 33/71 (46%)
Query: 614 YLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTK-MLDILEDYLDGEGYKYERIDGNI 672
+LVKW+ Y TW D E + K + + N K +LD ++ + E+ D I
Sbjct: 562 FLVKWKGWAYIHNTW-DAYESLNNFKGNKKLQNYVKGILDNIQWRQEASKEDIEQAD--I 618
Query: 673 TGS-MRQESID 682
T M+QE D
Sbjct: 619 TKELMKQEIQD 629
Score = 54 (24.1 bits), Expect = 3.6e-25, Sum P(2) = 3.6e-25
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 151 LRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYN 190
L+D +T+ +KW L D+A +E + L E ++ YN
Sbjct: 874 LKDKNTLGTIKWEFLAVDEAHRLKNSESV--LHEVLKLYN 911
Score = 48 (22.0 bits), Expect = 2.7e-109, Sum P(3) = 2.7e-109
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 158 YLVKWRDLPYDKATWEDENEDIPGLKESIEFYN 190
+LVKW+ Y TW D E + K + + N
Sbjct: 562 FLVKWKGWAYIHNTW-DAYESLNNFKGNKKLQN 593
Score = 39 (18.8 bits), Expect = 2.4e-108, Sum P(3) = 2.4e-108
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 220 YTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHA 251
YTPPP + T Q PF GM +++
Sbjct: 34 YTPPPLQQQTPPNM----QSPFSTTPGMGINS 61
Score = 39 (18.8 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 17/67 (25%), Positives = 29/67 (43%)
Query: 111 KRMARLNRHNINDEELEKKYYRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKA 170
+R+ R++ N+ +KKYY++ + + N+ KT L K + PY
Sbjct: 989 ERILRVDLSNV-----QKKYYKWILTKNFQELNKGKGEKTTLLNIMTELKKTCNHPYLYQ 1043
Query: 171 TWEDENE 177
DE E
Sbjct: 1044 NARDECE 1050
>UNIPROTKB|E1BS47 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0003682 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AADN02022009 EMBL:AADN02022010
IPI:IPI00598234 Ensembl:ENSGALT00000005903 ArrayExpress:E1BS47
Uniprot:E1BS47
Length = 1326
Score = 710 (255.0 bits), Expect = 1.6e-108, Sum P(4) = 1.6e-108
Identities = 165/411 (40%), Positives = 236/411 (57%)
Query: 225 EKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQT 284
E+P D KK E + ++ +L YQLEG+NWL ++W + ILADEMGLGKTIQ+
Sbjct: 132 ERPPADDWKKSESSREYKNNN--KLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQS 189
Query: 285 ITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 344
ITFLY ++ +G GPFLV APLSTI NWEREF TW + VV Y G + R ++ +++
Sbjct: 190 ITFLYEIYLKG-IHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEM 247
Query: 345 SWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQS 404
++D +G R+ + KFH ++T++E+I D L +I W +V+DEAHRLK+
Sbjct: 248 YFKDP--QG----RVIKGSYKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNC 301
Query: 405 KFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQV 464
K + L +++K+LLTGTP P +F T+F EF D+ EEQV
Sbjct: 302 KLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPGRFPSETTFMQEFGDLKTEEQV 361
Query: 465 KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGG 524
++L +L P MLRRLK DV KN+ K E I+ VEL+ +QKKYY+ IL +NF L+ KGGG
Sbjct: 362 QKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFAFLS-KGGG 420
Query: 525 QQ--VSLLNIMMDLKKCCNHPYLFPAAAEEA--------PVQGGQYEIQALTRAAGXXXX 574
Q +LLN MM+L+KCCNHPYL A E+ +++QA+ +AAG
Sbjct: 421 QANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVL 480
Query: 575 XXXXXXXXXEDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDK 625
GHR LI ++++ + + YL++ R PY++
Sbjct: 481 IDKLLPKLKAGGHRV------LIFSQMVRCLDILED---YLIQ-RRYPYER 521
Score = 325 (119.5 bits), Expect = 1.6e-108, Sum P(4) = 1.6e-108
Identities = 78/193 (40%), Positives = 115/193 (59%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M + LDILEDYL Y YERIDG + G++RQ +IDRF+ P + +FVFLL TR+GGL
Sbjct: 498 FSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGL 557
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDI 763
GINL ADT II+DSDWNP ND+QA +R HRIGQ +K + + T Y+ +
Sbjct: 558 GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ-SKSVKIYRLITRNSYEREM------ 610
Query: 764 QAFSRAH-RIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGG-------K 815
F +A ++G +K ++ R + V Q++K+++ ++R G G +
Sbjct: 611 --FDKASLKLGL-DKAVLQSMSGRENATNGVQQLSKKEI---EDLLRKGAYGALMDEEDE 664
Query: 816 QANFTKQELDDIL 828
+ F ++++D IL
Sbjct: 665 GSKFCEEDIDQIL 677
Score = 214 (80.4 bits), Expect = 6.8e-97, Sum P(4) = 6.8e-97
Identities = 50/115 (43%), Positives = 65/115 (56%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
P +D F R G INL ADT II+DSDWNP ND+QA +R HRIGQ V IY
Sbjct: 541 PDSDRFVFLLCTRAGGLG--INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIY 598
Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQAN-----FTKQELDDILRFG 831
R +TRNS E + A K+ L V++ G + A +K+E++D+LR G
Sbjct: 599 RLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKG 653
Score = 81 (33.6 bits), Expect = 1.6e-108, Sum P(4) = 1.6e-108
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 137 PEWLIANRVIN-SKTLRDGS---TIYLVKWRDLPYDKATWEDENEDIPGLK-ESIE 187
P+++ +R+++ S++ D T YLVKW LPY+ +TWE + +DI K E E
Sbjct: 65 PDYVEIDRILDFSRSTDDNGEPVTHYLVKWCSLPYEDSTWELK-QDIDQAKIEEFE 119
Score = 81 (33.6 bits), Expect = 2.7e-27, Sum P(3) = 2.7e-27
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 593 PEWLIANRVIN-SKTLRDGS---TIYLVKWRDLPYDKATWEDENEDIPGLK-ESIE 643
P+++ +R+++ S++ D T YLVKW LPY+ +TWE + +DI K E E
Sbjct: 65 PDYVEIDRILDFSRSTDDNGEPVTHYLVKWCSLPYEDSTWELK-QDIDQAKIEEFE 119
Score = 40 (19.1 bits), Expect = 1.6e-108, Sum P(4) = 1.6e-108
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 945 EELL--SDMKSDVSRLPATLARIP 966
+EL+ SD++SD P+T R P
Sbjct: 760 DELMEFSDLESDSEEKPSTKPRRP 783
>UNIPROTKB|E1C1A9 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:AADN02041467 EMBL:AADN02041468 EMBL:AADN02041469
EMBL:AADN02041470 IPI:IPI00575702 Ensembl:ENSGALT00000011260
Uniprot:E1C1A9
Length = 1727
Score = 724 (259.9 bits), Expect = 2.5e-108, Sum P(4) = 2.5e-108
Identities = 150/335 (44%), Positives = 211/335 (62%)
Query: 236 EKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEG 295
+KQP ++ ++L YQLEG+NWL +SW +N ILADEMGLGKTIQTI+FL LF +
Sbjct: 473 KKQPSYIGSENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQH 532
Query: 296 HCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGK 355
GPFLV PLST+ +W+REFE WAP+ VV Y+GD R ++R+++ W +
Sbjct: 533 QLYGPFLVVVPLSTLTSWQREFEVWAPEINVVVYIGDLMSRNMIREYE--WIHS------ 584
Query: 356 PCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSI 415
+S +KF+ L+T+YE++ D A+LGSI WA L VDEAHRLK++ S +K L +
Sbjct: 585 ----QSKRLKFNALITTYEILLKDKAVLGSISWAFLGVDEAHRLKNDDSLLYKTLIDFKS 640
Query: 416 QNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHM 475
++LL+TGTP PEKF F+ + +E + LH +L P +
Sbjct: 641 NHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFL 699
Query: 476 LRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMD 535
LRR+K DV K++P+K E I+RVE+S +QK+YYK+ILTRN++AL+ G LNI+M+
Sbjct: 700 LRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALSKGTRGSTSGFLNIVME 759
Query: 536 LKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAG 570
LKKCCNH YL EE + G +Q+L R++G
Sbjct: 760 LKKCCNHCYLIKPP-EENERENGIETLQSLIRSSG 793
Score = 330 (121.2 bits), Expect = 2.5e-108, Sum P(4) = 2.5e-108
Identities = 64/110 (58%), Positives = 85/110 (77%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M +MLDIL +YL + Y ++R+DG+I G +R++++D FNA G+ F FLLSTR+GGL
Sbjct: 815 FSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGL 874
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYIN---LATADTV 750
GINLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ K +N L T TV
Sbjct: 875 GINLASADTVVIFDSDWNPQNDLQAQARAHRIGQK-KQVNIYRLVTKGTV 923
Score = 249 (92.7 bits), Expect = 7.5e-100, Sum P(4) = 7.5e-100
Identities = 53/102 (51%), Positives = 71/102 (69%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ +V IYR VT+ +VEE + + AK+KM
Sbjct: 876 INLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKM 935
Query: 802 MLTHLVVRP-----------GMGGKQAN-FTKQELDDILRFG 831
+L HLV++ G +N F K+EL IL+FG
Sbjct: 936 VLDHLVIQRMDTTGRTVLDNNSGRSNSNPFNKEELTAILKFG 977
Score = 74 (31.1 bits), Expect = 2.5e-108, Sum P(4) = 2.5e-108
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 147 NSKTLRDGSTIYLVKWRDLPYDKATWEDE 175
NS+ YL KW LPY + +WEDE
Sbjct: 404 NSRKTSSNDPEYLCKWMGLPYAECSWEDE 432
Score = 74 (31.1 bits), Expect = 9.3e-29, Sum P(4) = 9.3e-29
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 603 NSKTLRDGSTIYLVKWRDLPYDKATWEDE 631
NS+ YL KW LPY + +WEDE
Sbjct: 404 NSRKTSSNDPEYLCKWMGLPYAECSWEDE 432
Score = 68 (29.0 bits), Expect = 1.0e-107, Sum P(4) = 1.0e-107
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 153 DGSTIYLVKWRDLPYDKATWEDEN----EDIPGLKESIEF 188
+G YL+KW+ Y +TWE E + + GLK+ F
Sbjct: 305 EGEVHYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENF 344
Score = 68 (29.0 bits), Expect = 2.1e-26, Sum P(4) = 2.1e-26
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 609 DGSTIYLVKWRDLPYDKATWEDEN----EDIPGLKESIEF 644
+G YL+KW+ Y +TWE E + + GLK+ F
Sbjct: 305 EGEVHYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENF 344
Score = 51 (23.0 bits), Expect = 6.3e-106, Sum P(4) = 6.3e-106
Identities = 20/78 (25%), Positives = 31/78 (39%)
Query: 170 ATWEDENEDIPGLKESIEFYNXXXXXXXXXXXXXELQEDEDGASGSKPRRYTPPP--EKP 227
A+ E D ES + E E ++GSK ++ TPP EKP
Sbjct: 23 ASEEASGSDSASQSESEQGSEQGSESNSSSESSESQSESESESTGSKSQQ-TPPETKEKP 81
Query: 228 TT------DLRKKYEKQP 239
+ D++K +E+ P
Sbjct: 82 ASKKERIADVKKMWEEYP 99
Score = 39 (18.8 bits), Expect = 1.1e-104, Sum P(4) = 1.1e-104
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 206 QEDEDGASGSKPRRYT 221
++D+D G P+R T
Sbjct: 210 EDDDDDEDGETPKRQT 225
Score = 38 (18.4 bits), Expect = 2.5e-108, Sum P(4) = 2.5e-108
Identities = 12/61 (19%), Positives = 24/61 (39%)
Query: 866 RHHYEQHQEDVSRTLGKGKRVRKQTXXXXXXXXXXXXXXXXLTGRRSAKKKEMSKQERDR 925
RH Q +E + G K K+ + S K+K+ +K+++++
Sbjct: 1371 RHSDNQSEEGEVKDDGLDKSPVKKKQKKKENKENKEKQTSSKKEKESDKEKKKTKEKKEK 1430
Query: 926 P 926
P
Sbjct: 1431 P 1431
Score = 38 (18.4 bits), Expect = 1.5e-104, Sum P(4) = 1.5e-104
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 206 QEDEDGASGSKPRRYTPPPEK 226
+EDEDG P P++
Sbjct: 154 EEDEDGGDQGTSAESEPEPKR 174
Score = 37 (18.1 bits), Expect = 3.1e-108, Sum P(4) = 3.1e-108
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 866 RHH-YEQH 872
RHH YEQH
Sbjct: 1668 RHHQYEQH 1675
>UNIPROTKB|I3LRQ2 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00560000076896 EMBL:CT954235 EMBL:CU466964
Ensembl:ENSSSCT00000027293 Uniprot:I3LRQ2
Length = 1051
Score = 709 (254.6 bits), Expect = 1.3e-107, Sum P(3) = 1.3e-107
Identities = 150/353 (42%), Positives = 212/353 (60%)
Query: 236 EKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEG 295
+KQP +L ++L YQLEG+NWL +SW ++ ILADEMGLGKTIQTI+FL LF +
Sbjct: 473 KKQPAYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQH 532
Query: 296 HCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGK 355
GPFL+ PLST+ +W+REFE WAP+ VV Y+GD R +R+++ W +
Sbjct: 533 QLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYE--WIHS------ 584
Query: 356 PCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSI 415
++ +KF+ L+T+YE++ D +LGSI WA L VDEAHRLK++ S +K L +
Sbjct: 585 ----QTKRLKFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKS 640
Query: 416 QNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHM 475
++LL+TGTP PEKF F+ + +E + LH +L P +
Sbjct: 641 NHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFL 699
Query: 476 LRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMD 535
LRR+K DV K++P+K E I+RVE+S +QK+YYK+ILTRN++AL G LNI+M+
Sbjct: 700 LRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVME 759
Query: 536 LKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
LKKCCNH YL EE + GQ + +L R++G E G+R
Sbjct: 760 LKKCCNHCYLIKPP-EENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNR 811
Score = 330 (121.2 bits), Expect = 1.3e-107, Sum P(3) = 1.3e-107
Identities = 64/110 (58%), Positives = 85/110 (77%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M +MLDIL +YL + Y ++R+DG+I G +R++++D FNA G+ F FLLSTR+GGL
Sbjct: 815 FSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGL 874
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYIN---LATADTV 750
GINLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ K +N L T TV
Sbjct: 875 GINLASADTVVIFDSDWNPQNDLQAQARAHRIGQK-KQVNIYRLVTKGTV 923
Score = 249 (92.7 bits), Expect = 4.4e-99, Sum P(3) = 4.4e-99
Identities = 53/102 (51%), Positives = 71/102 (69%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ +V IYR VT+ +VEE + + AK+KM
Sbjct: 876 INLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKM 935
Query: 802 MLTHLVVRP-----------GMGGKQAN-FTKQELDDILRFG 831
+L HLV++ G +N F K+EL IL+FG
Sbjct: 936 VLDHLVIQRMDTTGRTVLENNSGRSNSNPFNKEELTAILKFG 977
Score = 72 (30.4 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 609 DGSTIYLVKWRDLPYDKATWEDEN----EDIPGLKESIEFYNMTKMLDILEDYL 658
+G YL+KW+ Y +TWE E + + GLK+ +E N K D ++ +L
Sbjct: 301 EGEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKK-LE--NFKKKEDEIKQWL 351
Score = 71 (30.1 bits), Expect = 1.3e-107, Sum P(3) = 1.3e-107
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 158 YLVKWRDLPYDKATWEDE 175
YL KW LPY + +WEDE
Sbjct: 415 YLCKWMGLPYSECSWEDE 432
Score = 71 (30.1 bits), Expect = 3.5e-30, Sum P(3) = 3.5e-30
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 614 YLVKWRDLPYDKATWEDE 631
YL KW LPY + +WEDE
Sbjct: 415 YLCKWMGLPYSECSWEDE 432
Score = 68 (29.0 bits), Expect = 2.8e-107, Sum P(3) = 2.8e-107
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 153 DGSTIYLVKWRDLPYDKATWEDEN----EDIPGLKESIEF 188
+G YL+KW+ Y +TWE E + + GLK+ F
Sbjct: 301 EGEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENF 340
>UNIPROTKB|D4AD08 [details] [associations]
symbol:Chd2 "Chromodomain helicase DNA binding protein 2
(Predicted)" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 EMBL:CH473980
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 KO:K11367 CTD:1106 OrthoDB:EOG4QRH36
IPI:IPI00778855 RefSeq:NP_001100993.1 UniGene:Rn.225034
Ensembl:ENSRNOT00000055829 GeneID:308738 KEGG:rno:308738
RGD:1310056 NextBio:659434 Uniprot:D4AD08
Length = 1834
Score = 719 (258.2 bits), Expect = 1.4e-107, Sum P(4) = 1.4e-107
Identities = 151/353 (42%), Positives = 215/353 (60%)
Query: 236 EKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEG 295
+KQP +L ++L YQLEG+NWL +SW ++ ILADEMGLGKTIQTI+FL LF +
Sbjct: 478 KKQPAYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQH 537
Query: 296 HCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGK 355
GPFL+ PLST+ +W+REFE WAP+ VV Y+GD R +R+++ W +
Sbjct: 538 QLYGPFLIVVPLSTLTSWQREFEIWAPEVNVVVYIGDLMSRNTIREYE--WIHS------ 589
Query: 356 PCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSI 415
++ +KF+ L+T+YE++ D +LGSI WA L VDEAHRLK++ S +K L +
Sbjct: 590 ----QTKRLKFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKS 645
Query: 416 QNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHM 475
++LL+TGTP PEKF F+ + +E + LH +L P +
Sbjct: 646 NHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFL 704
Query: 476 LRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMD 535
LRR+K DV K++P+K E I+RVE+S +QK+YYK+ILTRN++AL G LNI+M+
Sbjct: 705 LRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVME 764
Query: 536 LKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
LKKCCNH YL A E++ + GQ +Q+L R++G E G+R
Sbjct: 765 LKKCCNHCYLI-RAPEDSERETGQEVLQSLIRSSGKLILLDKLLTRLRERGNR 816
Score = 330 (121.2 bits), Expect = 1.4e-107, Sum P(4) = 1.4e-107
Identities = 64/110 (58%), Positives = 85/110 (77%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M +MLDIL +YL + Y ++R+DG+I G +R++++D FNA G+ F FLLSTR+GGL
Sbjct: 820 FSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGL 879
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYIN---LATADTV 750
GINLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ K +N L T TV
Sbjct: 880 GINLASADTVVIFDSDWNPQNDLQAQARAHRIGQK-KQVNIYRLVTKGTV 928
Score = 249 (92.7 bits), Expect = 4.4e-99, Sum P(4) = 4.4e-99
Identities = 53/102 (51%), Positives = 71/102 (69%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ +V IYR VT+ +VEE + + AK+KM
Sbjct: 881 INLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKM 940
Query: 802 MLTHLVVRP-----------GMGGKQAN-FTKQELDDILRFG 831
+L HLV++ G +N F K+EL IL+FG
Sbjct: 941 VLDHLVIQRMDTTGRTVLENNSGRSNSNPFNKEELTAILKFG 982
Score = 71 (30.1 bits), Expect = 1.4e-107, Sum P(4) = 1.4e-107
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 158 YLVKWRDLPYDKATWEDE 175
YL KW LPY + +WEDE
Sbjct: 420 YLCKWMGLPYSECSWEDE 437
Score = 71 (30.1 bits), Expect = 1.6e-28, Sum P(4) = 1.6e-28
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 614 YLVKWRDLPYDKATWEDE 631
YL KW LPY + +WEDE
Sbjct: 420 YLCKWMGLPYSECSWEDE 437
Score = 71 (30.1 bits), Expect = 1.3e-17, Sum P(3) = 1.3e-17
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 609 DGSTIYLVKWRDLPYDKATWEDEN----EDIPGLKESIEFYNMTKMLDILEDYL 658
+G YL+KW+ Y +TWE E + + GLK+ +E N K D ++ +L
Sbjct: 309 EGEIQYLIKWKGWSYIHSTWESEESLQQQKVKGLKK-LE--NFKKKEDEIKQWL 359
Score = 67 (28.6 bits), Expect = 3.8e-107, Sum P(4) = 3.8e-107
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 153 DGSTIYLVKWRDLPYDKATWEDEN----EDIPGLKESIEF 188
+G YL+KW+ Y +TWE E + + GLK+ F
Sbjct: 309 EGEIQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENF 348
Score = 41 (19.5 bits), Expect = 1.4e-107, Sum P(4) = 1.4e-107
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 862 VKLLRHHYEQHQEDVSRTLGKGKR 885
V ++ + EQ +E+ S G GKR
Sbjct: 1189 VSAMQEYEEQLKENASEGKGPGKR 1212
Score = 37 (18.1 bits), Expect = 3.8e-107, Sum P(4) = 3.8e-107
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 866 RHH-YEQH 872
RHH YEQH
Sbjct: 1667 RHHQYEQH 1674
>UNIPROTKB|J9NSS6 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00560000076896 EMBL:AAEX03002279 EMBL:AAEX03002280
Ensembl:ENSCAFT00000043290 Uniprot:J9NSS6
Length = 1379
Score = 710 (255.0 bits), Expect = 1.5e-107, Sum P(4) = 1.5e-107
Identities = 150/353 (42%), Positives = 212/353 (60%)
Query: 236 EKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEG 295
+KQP +L ++L YQLEG+NWL +SW ++ ILADEMGLGKTIQTI+FL LF +
Sbjct: 471 KKQPTYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQH 530
Query: 296 HCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGK 355
GPFL+ PLST+ +W+REFE WAP+ VV Y+GD R +R+++ W +
Sbjct: 531 QLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYE--WIHS------ 582
Query: 356 PCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSI 415
++ +KF+ L+T+YE++ D +LGSI WA L VDEAHRLK++ S +K L +
Sbjct: 583 ----QTKRLKFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKS 638
Query: 416 QNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHM 475
++LL+TGTP PEKF F+ + +E + LH +L P +
Sbjct: 639 HHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFL 697
Query: 476 LRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMD 535
LRR+K DV K++P+K E I+RVE+S +QK+YYK+ILTRN++AL G LNI+M+
Sbjct: 698 LRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVME 757
Query: 536 LKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
LKKCCNH YL EE + GQ + +L R++G E G+R
Sbjct: 758 LKKCCNHCYLIKPP-EENERENGQEVLLSLIRSSGKLILLDKLLTRLRERGNR 809
Score = 330 (121.2 bits), Expect = 1.5e-107, Sum P(4) = 1.5e-107
Identities = 64/110 (58%), Positives = 85/110 (77%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M +MLDIL +YL + Y ++R+DG+I G +R++++D FNA G+ F FLLSTR+GGL
Sbjct: 813 FSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGL 872
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYIN---LATADTV 750
GINLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ K +N L T TV
Sbjct: 873 GINLASADTVVIFDSDWNPQNDLQAQARAHRIGQK-KQVNIYRLVTKGTV 921
Score = 249 (92.7 bits), Expect = 4.5e-99, Sum P(4) = 4.5e-99
Identities = 53/102 (51%), Positives = 71/102 (69%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ +V IYR VT+ +VEE + + AK+KM
Sbjct: 874 INLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKM 933
Query: 802 MLTHLVVRP-----------GMGGKQAN-FTKQELDDILRFG 831
+L HLV++ G +N F K+EL IL+FG
Sbjct: 934 VLDHLVIQRMDTTGRTVLENNSGRSNSNPFNKEELTAILKFG 975
Score = 72 (30.4 bits), Expect = 7.1e-18, Sum P(3) = 7.1e-18
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 606 TLRDGSTI-YLVKWRDLPYDKATWEDEN----EDIPGLKESIEFYNMTKMLDILEDYL 658
T +D S + YL+KW+ Y +TWE E + + GLK+ +E N K D ++ +L
Sbjct: 298 TEKDESEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKK-LE--NFKKKEDEIKQWL 352
Score = 71 (30.1 bits), Expect = 1.5e-107, Sum P(4) = 1.5e-107
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 158 YLVKWRDLPYDKATWEDE 175
YL KW LPY + +WEDE
Sbjct: 413 YLCKWMGLPYSECSWEDE 430
Score = 71 (30.1 bits), Expect = 5.5e-29, Sum P(4) = 5.5e-29
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 614 YLVKWRDLPYDKATWEDE 631
YL KW LPY + +WEDE
Sbjct: 413 YLCKWMGLPYSECSWEDE 430
Score = 68 (29.0 bits), Expect = 3.1e-107, Sum P(4) = 3.1e-107
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 150 TLRDGSTI-YLVKWRDLPYDKATWEDEN----EDIPGLKESIEF 188
T +D S + YL+KW+ Y +TWE E + + GLK+ F
Sbjct: 298 TEKDESEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENF 341
Score = 38 (18.4 bits), Expect = 1.5e-107, Sum P(4) = 1.5e-107
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 862 VKLLRHHYEQHQEDVSRTLGKGKR 885
V ++ + EQ +E+ S G GK+
Sbjct: 1182 VSAMQEYEEQLKENASEGKGPGKK 1205
>FB|FBgn0250786 [details] [associations]
symbol:Chd1 "Chromodomain-helicase-DNA-binding protein 1"
species:7227 "Drosophila melanogaster" [GO:0005705 "polytene
chromosome interband" evidence=IDA] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005703 "polytene chromosome puff" evidence=IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0035042 "fertilization,
exchange of chromosomal proteins" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
EMBL:AE014134 GO:GO:0006355 GO:GO:0003677 GO:GO:0048477
GO:GO:0006351 GO:GO:0003682 GO:GO:0004386 GO:GO:0007476
InterPro:IPR016197 SUPFAM:SSF54160 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598 GO:GO:0005703
InterPro:IPR025260 Pfam:PF13907 EMBL:L77907 PIR:T13944
RefSeq:NP_477197.1 ProteinModelPortal:Q7KU24 SMR:Q7KU24
STRING:Q7KU24 PaxDb:Q7KU24 PRIDE:Q7KU24 EnsemblMetazoa:FBtr0077674
GeneID:33505 KEGG:dme:Dmel_CG3733 UCSC:CG3733-RA CTD:1105
FlyBase:FBgn0250786 GeneTree:ENSGT00560000076896 InParanoid:Q7KU24
KO:K11367 OrthoDB:EOG45MKM5 PhylomeDB:Q7KU24 ChiTaRS:CHD1
GenomeRNAi:33505 NextBio:783939 Bgee:Q7KU24 GO:GO:0005705
GO:GO:0035042 Uniprot:Q7KU24
Length = 1883
Score = 713 (256.0 bits), Expect = 2.0e-107, Sum P(3) = 2.0e-107
Identities = 148/356 (41%), Positives = 218/356 (61%)
Query: 234 KYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFK 293
+ + QP FL +G+ L YQ++G+NWL +SW + ILADEMGLGKTIQTI FLYSLFK
Sbjct: 514 RIKNQPEFLS-SGLTLRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFK 572
Query: 294 EGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRG 353
H GPFL PLST+ W+REF+ WAPD VVTY+GD R +++ ++ +E
Sbjct: 573 IHHLYGPFLCVVPLSTMTAWQREFDLWAPDMNVVTYLGDIKSRELIQQYEWQFES----- 627
Query: 354 GKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGY 413
S +KF+ +LT+YE++ D LG+++WA L+VDEAHRLK++ S +K L +
Sbjct: 628 -------SKRLKFNCILTTYEIVLKDKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKEF 680
Query: 414 SIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGP 473
++LL+TGTP P+KF+ +F+ + + ++++ RLH L P
Sbjct: 681 DTNHRLLITGTPLQNSLKELWALLHFIMPDKFDTWENFEVQHGN-AEDKGYTRLHQQLEP 739
Query: 474 HMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIM 533
++LRR+K DV K++P+K E I+RVE++ +QK+YYK+ILT+NF+AL G + LNI+
Sbjct: 740 YILRRVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNFDALRKGKRGSTSTFLNIV 799
Query: 534 MDLKKCCNHPYLF-PAAAEEAPVQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
++LKKCCNH L P+ E +Q + +Q L + +G E GHR
Sbjct: 800 IELKKCCNHAALIRPSEFELMGLQQDE-ALQTLLKGSGKLVLLDKLLCRLKETGHR 854
Score = 343 (125.8 bits), Expect = 2.0e-107, Sum P(3) = 2.0e-107
Identities = 65/109 (59%), Positives = 84/109 (77%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M +MLD+L DYL + ++R+DG+I G MR++++D FNA G+ F FLLSTR+GGL
Sbjct: 858 FSQMVRMLDVLADYLQKRHFPFQRLDGSIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGL 917
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKY--INLATADTV 750
GINLATADTVII+DSDWNP ND+QA +RAHRIGQ+N+ L TA +V
Sbjct: 918 GINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSV 966
Score = 255 (94.8 bits), Expect = 3.6e-98, Sum P(3) = 3.6e-98
Identities = 57/104 (54%), Positives = 72/104 (69%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATADTVII+DSDWNP ND+QA +RAHRIGQ+N+V IYR VT SVEE++ + AK+KM
Sbjct: 919 INLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKM 978
Query: 802 MLTHLVV------------RPGMG-GKQAN-FTKQELDDILRFG 831
+L HLV+ + G G +N F K +L IL+FG
Sbjct: 979 VLDHLVIQRMDTTGRTVLDKSGNGHSSNSNPFNKDDLSAILKFG 1022
Score = 81 (33.6 bits), Expect = 2.0e-107, Sum P(3) = 2.0e-107
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 153 DGSTIYLVKWRDLPYDKATWED 174
DG+ YL KW+ LPY ++TWED
Sbjct: 453 DGTEEYLCKWQSLPYAESTWED 474
Score = 81 (33.6 bits), Expect = 7.1e-30, Sum P(3) = 7.1e-30
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 609 DGSTIYLVKWRDLPYDKATWED 630
DG+ YL KW+ LPY ++TWED
Sbjct: 453 DGTEEYLCKWQSLPYAESTWED 474
Score = 55 (24.4 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 25/109 (22%), Positives = 40/109 (36%)
Query: 589 YGIKPEWLIANRVINSKTLRDGSTI--YLVKWRDLPYDKATWEDEN--EDIP--GLKESI 642
Y I+ + + K D T +L+KW+ Y TWE E D+ G+K+
Sbjct: 341 YAIEENGFDPHAGFDEKQTPDAETEAQFLIKWKGWSYIHNTWESEATLRDMKAKGMKKLD 400
Query: 643 EFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQE--SIDRFNAPGA 689
F K Y E Y + + + ++DR A G+
Sbjct: 401 NFIKKEKEQAYWRRYAGPEDIDYFECQLELQHELLKSYNNVDRIIAKGS 449
Score = 52 (23.4 bits), Expect = 2.3e-104, Sum P(3) = 2.3e-104
Identities = 13/45 (28%), Positives = 19/45 (42%)
Query: 133 YGIKPEWLIANRVINSKTLRDGSTI--YLVKWRDLPYDKATWEDE 175
Y I+ + + K D T +L+KW+ Y TWE E
Sbjct: 341 YAIEENGFDPHAGFDEKQTPDAETEAQFLIKWKGWSYIHNTWESE 385
>UNIPROTKB|I3LQZ8 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:CT954235 EMBL:CU466964 Ensembl:ENSSSCT00000025402
Uniprot:I3LQZ8
Length = 1709
Score = 703 (252.5 bits), Expect = 2.9e-107, Sum P(4) = 2.9e-107
Identities = 150/354 (42%), Positives = 212/354 (59%)
Query: 236 EKQPPFLDDTGMQLHAYQLEGINWLRYSW-GQNIDTILADEMGLGKTIQTITFLYSLFKE 294
+KQP +L ++L YQLEG+NWL +SW ++ ILADEMGLGKTIQTI+FL LF +
Sbjct: 459 KKQPAYLGGENLELRDYQLEGLNWLAHSWCNRSNSVILADEMGLGKTIQTISFLSYLFHQ 518
Query: 295 GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGG 354
GPFL+ PLST+ +W+REFE WAP+ VV Y+GD R +R+++ W +
Sbjct: 519 HQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYE--WIHS----- 571
Query: 355 KPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYS 414
++ +KF+ L+T+YE++ D +LGSI WA L VDEAHRLK++ S +K L +
Sbjct: 572 -----QTKRLKFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFK 626
Query: 415 IQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPH 474
++LL+TGTP PEKF F+ + +E + LH +L P
Sbjct: 627 SNHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPF 685
Query: 475 MLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMM 534
+LRR+K DV K++P+K E I+RVE+S +QK+YYK+ILTRN++AL G LNI+M
Sbjct: 686 LLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVM 745
Query: 535 DLKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
+LKKCCNH YL EE + GQ + +L R++G E G+R
Sbjct: 746 ELKKCCNHCYLIKPP-EENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNR 798
Score = 330 (121.2 bits), Expect = 2.9e-107, Sum P(4) = 2.9e-107
Identities = 64/110 (58%), Positives = 85/110 (77%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M +MLDIL +YL + Y ++R+DG+I G +R++++D FNA G+ F FLLSTR+GGL
Sbjct: 802 FSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGL 861
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYIN---LATADTV 750
GINLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ K +N L T TV
Sbjct: 862 GINLASADTVVIFDSDWNPQNDLQAQARAHRIGQK-KQVNIYRLVTKGTV 910
Score = 249 (92.7 bits), Expect = 8.9e-99, Sum P(4) = 8.9e-99
Identities = 53/102 (51%), Positives = 71/102 (69%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ +V IYR VT+ +VEE + + AK+KM
Sbjct: 863 INLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKM 922
Query: 802 MLTHLVVRP-----------GMGGKQAN-FTKQELDDILRFG 831
+L HLV++ G +N F K+EL IL+FG
Sbjct: 923 VLDHLVIQRMDTTGRTVLENNSGRSNSNPFNKEELTAILKFG 964
Score = 84 (34.6 bits), Expect = 2.9e-107, Sum P(4) = 2.9e-107
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 135 IKPEWLIANRVI-NSKTLRDGSTIYLVKWRDLPYDKATWEDE 175
+ ++ I RVI N K YL KW LPY + +WEDE
Sbjct: 377 LNKQYQIVERVIGNRKPAPSNEPEYLCKWMGLPYSECSWEDE 418
Score = 84 (34.6 bits), Expect = 6.6e-30, Sum P(4) = 6.6e-30
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 591 IKPEWLIANRVI-NSKTLRDGSTIYLVKWRDLPYDKATWEDE 631
+ ++ I RVI N K YL KW LPY + +WEDE
Sbjct: 377 LNKQYQIVERVIGNRKPAPSNEPEYLCKWMGLPYSECSWEDE 418
Score = 72 (30.4 bits), Expect = 1.2e-17, Sum P(3) = 1.2e-17
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 609 DGSTIYLVKWRDLPYDKATWEDEN----EDIPGLKESIEFYNMTKMLDILEDYL 658
+G YL+KW+ Y +TWE E + + GLK+ +E N K D ++ +L
Sbjct: 306 EGEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKK-LE--NFKKKEDEIKQWL 356
Score = 68 (29.0 bits), Expect = 1.4e-105, Sum P(4) = 1.4e-105
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 153 DGSTIYLVKWRDLPYDKATWEDEN----EDIPGLKESIEF 188
+G YL+KW+ Y +TWE E + + GLK+ F
Sbjct: 306 EGEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENF 345
Score = 39 (18.8 bits), Expect = 2.9e-107, Sum P(4) = 2.9e-107
Identities = 8/18 (44%), Positives = 9/18 (50%)
Query: 855 NQDPAYWVKLLRHHYEQH 872
N +P W H YEQH
Sbjct: 1644 NNNPP-WGSDRHHQYEQH 1660
Score = 38 (18.4 bits), Expect = 3.7e-107, Sum P(4) = 3.7e-107
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 862 VKLLRHHYEQHQEDVSRTLGKGKR 885
V ++ + EQ +E+ S G GK+
Sbjct: 1171 VSAMQEYEEQLKENASEGKGPGKK 1194
>UNIPROTKB|O14647 [details] [associations]
symbol:CHD2 "Chromodomain-helicase-DNA-binding protein 2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=TAS] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006357 GO:GO:0004003 EMBL:CH471101
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOVERGEN:HBG005325
InterPro:IPR025260 Pfam:PF13907 KO:K11367 HOGENOM:HOG000207917
EMBL:AF006514 EMBL:BT007050 EMBL:FJ515838 EMBL:AC013394
EMBL:BC007347 EMBL:CR978407 IPI:IPI00023109 IPI:IPI00815893
RefSeq:NP_001036037.1 RefSeq:NP_001262.3 UniGene:Hs.220864
ProteinModelPortal:O14647 SMR:O14647 IntAct:O14647 STRING:O14647
PhosphoSite:O14647 PaxDb:O14647 PRIDE:O14647 DNASU:1106
Ensembl:ENST00000394196 Ensembl:ENST00000420239
Ensembl:ENST00000557381 GeneID:1106 KEGG:hsa:1106 UCSC:uc002bso.1
UCSC:uc002bsp.3 CTD:1106 GeneCards:GC15P093533 HGNC:HGNC:1917
MIM:602119 neXtProt:NX_O14647 PharmGKB:PA26453 InParanoid:O14647
OMA:AHSWCKN OrthoDB:EOG4QRH36 ChiTaRS:CHD2 GenomeRNAi:1106
NextBio:4584 ArrayExpress:O14647 Bgee:O14647 CleanEx:HS_CHD2
Genevestigator:O14647 GermOnline:ENSG00000173575 Uniprot:O14647
Length = 1828
Score = 714 (256.4 bits), Expect = 4.8e-107, Sum P(4) = 4.8e-107
Identities = 151/353 (42%), Positives = 212/353 (60%)
Query: 236 EKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEG 295
+KQP +L ++L YQLEG+NWL +SW +N ILADEMGLGKTIQTI+FL LF +
Sbjct: 471 KKQPAYLGGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQH 530
Query: 296 HCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGK 355
GPFL+ PLST+ +W+REFE WAP+ VV Y+GD R +R+++ W +
Sbjct: 531 QLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYE--WIHS------ 582
Query: 356 PCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSI 415
++ +KF+ L+T+YE++ D +LGSI WA L VDEAHRLK++ S +K L +
Sbjct: 583 ----QTKRLKFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKS 638
Query: 416 QNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHM 475
++LL+TGTP PEKF F+ + +E + LH +L P +
Sbjct: 639 NHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFL 697
Query: 476 LRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMD 535
LRR+K DV K++P+K E I+RVE+S +QK+YYK+ILTRN++AL G LNI+M+
Sbjct: 698 LRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVME 757
Query: 536 LKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
LKKCCNH YL EE + GQ + +L R++G E G+R
Sbjct: 758 LKKCCNHCYLIKPP-EENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNR 809
Score = 330 (121.2 bits), Expect = 4.8e-107, Sum P(4) = 4.8e-107
Identities = 64/110 (58%), Positives = 85/110 (77%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M +MLDIL +YL + Y ++R+DG+I G +R++++D FNA G+ F FLLSTR+GGL
Sbjct: 813 FSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGL 872
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYIN---LATADTV 750
GINLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ K +N L T TV
Sbjct: 873 GINLASADTVVIFDSDWNPQNDLQAQARAHRIGQK-KQVNIYRLVTKGTV 921
Score = 249 (92.7 bits), Expect = 1.5e-98, Sum P(4) = 1.5e-98
Identities = 53/102 (51%), Positives = 71/102 (69%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ +V IYR VT+ +VEE + + AK+KM
Sbjct: 874 INLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKM 933
Query: 802 MLTHLVVRP-----------GMGGKQAN-FTKQELDDILRFG 831
+L HLV++ G +N F K+EL IL+FG
Sbjct: 934 VLDHLVIQRMDTTGRTILENNSGRSNSNPFNKEELTAILKFG 975
Score = 71 (30.1 bits), Expect = 4.8e-107, Sum P(4) = 4.8e-107
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 158 YLVKWRDLPYDKATWEDE 175
YL KW LPY + +WEDE
Sbjct: 413 YLCKWMGLPYSECSWEDE 430
Score = 71 (30.1 bits), Expect = 1.6e-28, Sum P(4) = 1.6e-28
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 614 YLVKWRDLPYDKATWEDE 631
YL KW LPY + +WEDE
Sbjct: 413 YLCKWMGLPYSECSWEDE 430
Score = 71 (30.1 bits), Expect = 1.2e-17, Sum P(3) = 1.2e-17
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 609 DGSTIYLVKWRDLPYDKATWEDEN----EDIPGLKESIEFYNMTKMLDILEDYL 658
+G YL+KW+ Y +TWE E + + GLK+ +E N K D ++ +L
Sbjct: 302 EGEIQYLIKWKGWSYIHSTWESEESLQQQKVKGLKK-LE--NFKKKEDEIKQWL 352
Score = 67 (28.6 bits), Expect = 1.3e-106, Sum P(4) = 1.3e-106
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 153 DGSTIYLVKWRDLPYDKATWEDEN----EDIPGLKESIEF 188
+G YL+KW+ Y +TWE E + + GLK+ F
Sbjct: 302 EGEIQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENF 341
Score = 41 (19.5 bits), Expect = 4.8e-107, Sum P(4) = 4.8e-107
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 862 VKLLRHHYEQHQEDVSRTLGKGKR 885
V ++ + EQ +E+ S G GKR
Sbjct: 1182 VSAMQEYEEQLKENASEGKGPGKR 1205
Score = 39 (18.8 bits), Expect = 7.8e-107, Sum P(4) = 7.8e-107
Identities = 8/18 (44%), Positives = 9/18 (50%)
Query: 855 NQDPAYWVKLLRHHYEQH 872
N +P W H YEQH
Sbjct: 1652 NNNPP-WGSDRHHQYEQH 1668
>UNIPROTKB|J9NX79 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:AAEX03002279 EMBL:AAEX03002280 Ensembl:ENSCAFT00000044612
Uniprot:J9NX79
Length = 1689
Score = 710 (255.0 bits), Expect = 1.3e-106, Sum P(4) = 1.3e-106
Identities = 150/353 (42%), Positives = 212/353 (60%)
Query: 236 EKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEG 295
+KQP +L ++L YQLEG+NWL +SW ++ ILADEMGLGKTIQTI+FL LF +
Sbjct: 440 KKQPTYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQH 499
Query: 296 HCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGK 355
GPFL+ PLST+ +W+REFE WAP+ VV Y+GD R +R+++ W +
Sbjct: 500 QLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYE--WIHS------ 551
Query: 356 PCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSI 415
++ +KF+ L+T+YE++ D +LGSI WA L VDEAHRLK++ S +K L +
Sbjct: 552 ----QTKRLKFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKS 607
Query: 416 QNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHM 475
++LL+TGTP PEKF F+ + +E + LH +L P +
Sbjct: 608 HHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFL 666
Query: 476 LRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMD 535
LRR+K DV K++P+K E I+RVE+S +QK+YYK+ILTRN++AL G LNI+M+
Sbjct: 667 LRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVME 726
Query: 536 LKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
LKKCCNH YL EE + GQ + +L R++G E G+R
Sbjct: 727 LKKCCNHCYLIKPP-EENERENGQEVLLSLIRSSGKLILLDKLLTRLRERGNR 778
Score = 330 (121.2 bits), Expect = 1.3e-106, Sum P(4) = 1.3e-106
Identities = 64/110 (58%), Positives = 85/110 (77%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M +MLDIL +YL + Y ++R+DG+I G +R++++D FNA G+ F FLLSTR+GGL
Sbjct: 782 FSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGL 841
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYIN---LATADTV 750
GINLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ K +N L T TV
Sbjct: 842 GINLASADTVVIFDSDWNPQNDLQAQARAHRIGQK-KQVNIYRLVTKGTV 890
Score = 249 (92.7 bits), Expect = 4.1e-98, Sum P(4) = 4.1e-98
Identities = 53/102 (51%), Positives = 71/102 (69%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ +V IYR VT+ +VEE + + AK+KM
Sbjct: 843 INLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKM 902
Query: 802 MLTHLVVRP-----------GMGGKQAN-FTKQELDDILRFG 831
+L HLV++ G +N F K+EL IL+FG
Sbjct: 903 VLDHLVIQRMDTTGRTVLENNSGRSNSNPFNKEELTAILKFG 944
Score = 72 (30.4 bits), Expect = 1.5e-17, Sum P(3) = 1.5e-17
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 606 TLRDGSTI-YLVKWRDLPYDKATWEDEN----EDIPGLKESIEFYNMTKMLDILEDYL 658
T +D S + YL+KW+ Y +TWE E + + GLK+ +E N K D ++ +L
Sbjct: 282 TEKDESEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKK-LE--NFKKKEDEIKQWL 336
Score = 71 (30.1 bits), Expect = 1.3e-106, Sum P(4) = 1.3e-106
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 158 YLVKWRDLPYDKATWEDE 175
YL KW LPY + +WEDE
Sbjct: 382 YLCKWMGLPYSECSWEDE 399
Score = 71 (30.1 bits), Expect = 1.7e-28, Sum P(4) = 1.7e-28
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 614 YLVKWRDLPYDKATWEDE 631
YL KW LPY + +WEDE
Sbjct: 382 YLCKWMGLPYSECSWEDE 399
Score = 68 (29.0 bits), Expect = 2.8e-106, Sum P(4) = 2.8e-106
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 150 TLRDGSTI-YLVKWRDLPYDKATWEDEN----EDIPGLKESIEF 188
T +D S + YL+KW+ Y +TWE E + + GLK+ F
Sbjct: 282 TEKDESEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENF 325
Score = 38 (18.4 bits), Expect = 1.3e-106, Sum P(4) = 1.3e-106
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 862 VKLLRHHYEQHQEDVSRTLGKGKR 885
V ++ + EQ +E+ S G GK+
Sbjct: 1151 VSAMQEYEEQLKENASEGKGPGKK 1174
Score = 37 (18.1 bits), Expect = 1.7e-106, Sum P(4) = 1.7e-106
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 866 RHH-YEQH 872
RHH YEQH
Sbjct: 1633 RHHQYEQH 1640
>UNIPROTKB|F1NSG3 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008015 "blood circulation" evidence=IEA] [GO:0021545 "cranial
nerve development" evidence=IEA] [GO:0030217 "T cell
differentiation" evidence=IEA] [GO:0030540 "female genitalia
development" evidence=IEA] [GO:0035116 "embryonic hindlimb
morphogenesis" evidence=IEA] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IEA] [GO:0043584 "nose
development" evidence=IEA] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0050890 "cognition" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0060041 "retina development
in camera-type eye" evidence=IEA] [GO:0060123 "regulation of growth
hormone secretion" evidence=IEA] [GO:0060324 "face development"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0003007 "heart morphogenesis" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0007512 "adult heart development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0007628 "adult
walking behavior" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0040018 GO:GO:0003682
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 IPI:IPI00590082
OMA:TFGVIFD GO:GO:0060123 GeneTree:ENSGT00560000077077
EMBL:AADN02022009 EMBL:AADN02022010 Ensembl:ENSGALT00000024950
ArrayExpress:F1NSG3 Uniprot:F1NSG3
Length = 2248
Score = 710 (255.0 bits), Expect = 2.4e-106, Sum P(4) = 2.4e-106
Identities = 165/411 (40%), Positives = 236/411 (57%)
Query: 225 EKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQT 284
E+P D KK E + ++ +L YQLEG+NWL ++W + ILADEMGLGKTIQ+
Sbjct: 184 ERPPADDWKKSESSREYKNNN--KLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQS 241
Query: 285 ITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 344
ITFLY ++ +G GPFLV APLSTI NWEREF TW + VV Y G + R ++ +++
Sbjct: 242 ITFLYEIYLKG-IHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEM 299
Query: 345 SWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQS 404
++D +G R+ + KFH ++T++E+I D L +I W +V+DEAHRLK+
Sbjct: 300 YFKDP--QG----RVIKGSYKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNC 353
Query: 405 KFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQV 464
K + L +++K+LLTGTP P +F T+F EF D+ EEQV
Sbjct: 354 KLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPGRFPSETTFMQEFGDLKTEEQV 413
Query: 465 KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGG 524
++L +L P MLRRLK DV KN+ K E I+ VEL+ +QKKYY+ IL +NF L+ KGGG
Sbjct: 414 QKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFAFLS-KGGG 472
Query: 525 QQ--VSLLNIMMDLKKCCNHPYLFPAAAEEA--------PVQGGQYEIQALTRAAGXXXX 574
Q +LLN MM+L+KCCNHPYL A E+ +++QA+ +AAG
Sbjct: 473 QANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVL 532
Query: 575 XXXXXXXXXEDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDK 625
GHR LI ++++ + + YL++ R PY++
Sbjct: 533 IDKLLPKLKAGGHRV------LIFSQMVRCLDILED---YLIQ-RRYPYER 573
Score = 325 (119.5 bits), Expect = 2.4e-106, Sum P(4) = 2.4e-106
Identities = 78/193 (40%), Positives = 115/193 (59%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M + LDILEDYL Y YERIDG + G++RQ +IDRF+ P + +FVFLL TR+GGL
Sbjct: 550 FSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGL 609
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDI 763
GINL ADT II+DSDWNP ND+QA +R HRIGQ +K + + T Y+ +
Sbjct: 610 GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ-SKSVKIYRLITRNSYEREM------ 662
Query: 764 QAFSRAH-RIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGG-------K 815
F +A ++G +K ++ R + V Q++K+++ ++R G G +
Sbjct: 663 --FDKASLKLGL-DKAVLQSMSGRENATNGVQQLSKKEI---EDLLRKGAYGALMDEEDE 716
Query: 816 QANFTKQELDDIL 828
+ F ++++D IL
Sbjct: 717 GSKFCEEDIDQIL 729
Score = 214 (80.4 bits), Expect = 1.0e-94, Sum P(4) = 1.0e-94
Identities = 50/115 (43%), Positives = 65/115 (56%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
P +D F R G INL ADT II+DSDWNP ND+QA +R HRIGQ V IY
Sbjct: 593 PDSDRFVFLLCTRAGGLG--INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIY 650
Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQAN-----FTKQELDDILRFG 831
R +TRNS E + A K+ L V++ G + A +K+E++D+LR G
Sbjct: 651 RLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKG 705
Score = 81 (33.6 bits), Expect = 2.4e-106, Sum P(4) = 2.4e-106
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 137 PEWLIANRVIN-SKTLRDGS---TIYLVKWRDLPYDKATWEDENEDIPGLK-ESIE 187
P+++ +R+++ S++ D T YLVKW LPY+ +TWE + +DI K E E
Sbjct: 117 PDYVEIDRILDFSRSTDDNGEPVTHYLVKWCSLPYEDSTWELK-QDIDQAKIEEFE 171
Score = 81 (33.6 bits), Expect = 2.2e-26, Sum P(3) = 2.2e-26
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 593 PEWLIANRVIN-SKTLRDGS---TIYLVKWRDLPYDKATWEDENEDIPGLK-ESIE 643
P+++ +R+++ S++ D T YLVKW LPY+ +TWE + +DI K E E
Sbjct: 117 PDYVEIDRILDFSRSTDDNGEPVTHYLVKWCSLPYEDSTWELK-QDIDQAKIEEFE 171
Score = 41 (19.5 bits), Expect = 6.0e-75, Sum P(3) = 6.0e-75
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 656 DYLDGEGYKYERIDGNITGSMRQESIDR 683
D +G +K E N+ GS +ES+D+
Sbjct: 2191 DKTEGTAFKDEE---NLEGSDAEESLDK 2215
Score = 40 (19.1 bits), Expect = 2.4e-106, Sum P(4) = 2.4e-106
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 945 EELL--SDMKSDVSRLPATLARIP 966
+EL+ SD++SD P+T R P
Sbjct: 809 DELMEFSDLESDSEEKPSTKPRRP 832
>UNIPROTKB|E2R5Z7 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:AAEX03002279 EMBL:AAEX03002280 Ensembl:ENSCAFT00000017614
NextBio:20854276 Uniprot:E2R5Z7
Length = 1831
Score = 710 (255.0 bits), Expect = 2.7e-106, Sum P(4) = 2.7e-106
Identities = 150/353 (42%), Positives = 212/353 (60%)
Query: 236 EKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEG 295
+KQP +L ++L YQLEG+NWL +SW ++ ILADEMGLGKTIQTI+FL LF +
Sbjct: 474 KKQPTYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQH 533
Query: 296 HCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGK 355
GPFL+ PLST+ +W+REFE WAP+ VV Y+GD R +R+++ W +
Sbjct: 534 QLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYE--WIHS------ 585
Query: 356 PCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSI 415
++ +KF+ L+T+YE++ D +LGSI WA L VDEAHRLK++ S +K L +
Sbjct: 586 ----QTKRLKFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKS 641
Query: 416 QNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHM 475
++LL+TGTP PEKF F+ + +E + LH +L P +
Sbjct: 642 HHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFL 700
Query: 476 LRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMD 535
LRR+K DV K++P+K E I+RVE+S +QK+YYK+ILTRN++AL G LNI+M+
Sbjct: 701 LRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVME 760
Query: 536 LKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
LKKCCNH YL EE + GQ + +L R++G E G+R
Sbjct: 761 LKKCCNHCYLIKPP-EENERENGQEVLLSLIRSSGKLILLDKLLTRLRERGNR 812
Score = 330 (121.2 bits), Expect = 2.7e-106, Sum P(4) = 2.7e-106
Identities = 64/110 (58%), Positives = 85/110 (77%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M +MLDIL +YL + Y ++R+DG+I G +R++++D FNA G+ F FLLSTR+GGL
Sbjct: 816 FSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGL 875
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYIN---LATADTV 750
GINLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ K +N L T TV
Sbjct: 876 GINLASADTVVIFDSDWNPQNDLQAQARAHRIGQK-KQVNIYRLVTKGTV 924
Score = 249 (92.7 bits), Expect = 8.3e-98, Sum P(4) = 8.3e-98
Identities = 53/102 (51%), Positives = 71/102 (69%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ +V IYR VT+ +VEE + + AK+KM
Sbjct: 877 INLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKM 936
Query: 802 MLTHLVVRP-----------GMGGKQAN-FTKQELDDILRFG 831
+L HLV++ G +N F K+EL IL+FG
Sbjct: 937 VLDHLVIQRMDTTGRTVLENNSGRSNSNPFNKEELTAILKFG 978
Score = 72 (30.4 bits), Expect = 2.0e-17, Sum P(3) = 2.0e-17
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 606 TLRDGSTI-YLVKWRDLPYDKATWEDEN----EDIPGLKESIEFYNMTKMLDILEDYL 658
T +D S + YL+KW+ Y +TWE E + + GLK+ +E N K D ++ +L
Sbjct: 298 TEKDESEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKK-LE--NFKKKEDEIKQWL 352
Score = 71 (30.1 bits), Expect = 2.7e-106, Sum P(4) = 2.7e-106
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 158 YLVKWRDLPYDKATWEDE 175
YL KW LPY + +WEDE
Sbjct: 416 YLCKWMGLPYSECSWEDE 433
Score = 71 (30.1 bits), Expect = 2.6e-28, Sum P(4) = 2.6e-28
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 614 YLVKWRDLPYDKATWEDE 631
YL KW LPY + +WEDE
Sbjct: 416 YLCKWMGLPYSECSWEDE 433
Score = 68 (29.0 bits), Expect = 5.6e-106, Sum P(4) = 5.6e-106
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 150 TLRDGSTI-YLVKWRDLPYDKATWEDEN----EDIPGLKESIEF 188
T +D S + YL+KW+ Y +TWE E + + GLK+ F
Sbjct: 298 TEKDESEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENF 341
Score = 38 (18.4 bits), Expect = 2.7e-106, Sum P(4) = 2.7e-106
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 862 VKLLRHHYEQHQEDVSRTLGKGKR 885
V ++ + EQ +E+ S G GK+
Sbjct: 1185 VSAMQEYEEQLKENASEGKGPGKK 1208
Score = 37 (18.1 bits), Expect = 3.5e-106, Sum P(4) = 3.5e-106
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 866 RHH-YEQH 872
RHH YEQH
Sbjct: 1664 RHHQYEQH 1671
>UNIPROTKB|F1SA77 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:CT954235 EMBL:CU466964 Ensembl:ENSSSCT00000002524
Uniprot:F1SA77
Length = 1831
Score = 709 (254.6 bits), Expect = 2.7e-106, Sum P(4) = 2.7e-106
Identities = 150/353 (42%), Positives = 212/353 (60%)
Query: 236 EKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEG 295
+KQP +L ++L YQLEG+NWL +SW ++ ILADEMGLGKTIQTI+FL LF +
Sbjct: 473 KKQPAYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQH 532
Query: 296 HCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGK 355
GPFL+ PLST+ +W+REFE WAP+ VV Y+GD R +R+++ W +
Sbjct: 533 QLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYE--WIHS------ 584
Query: 356 PCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSI 415
++ +KF+ L+T+YE++ D +LGSI WA L VDEAHRLK++ S +K L +
Sbjct: 585 ----QTKRLKFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKS 640
Query: 416 QNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHM 475
++LL+TGTP PEKF F+ + +E + LH +L P +
Sbjct: 641 NHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFL 699
Query: 476 LRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMD 535
LRR+K DV K++P+K E I+RVE+S +QK+YYK+ILTRN++AL G LNI+M+
Sbjct: 700 LRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVME 759
Query: 536 LKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
LKKCCNH YL EE + GQ + +L R++G E G+R
Sbjct: 760 LKKCCNHCYLIKPP-EENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNR 811
Score = 330 (121.2 bits), Expect = 2.7e-106, Sum P(4) = 2.7e-106
Identities = 64/110 (58%), Positives = 85/110 (77%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M +MLDIL +YL + Y ++R+DG+I G +R++++D FNA G+ F FLLSTR+GGL
Sbjct: 815 FSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGL 874
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYIN---LATADTV 750
GINLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ K +N L T TV
Sbjct: 875 GINLASADTVVIFDSDWNPQNDLQAQARAHRIGQK-KQVNIYRLVTKGTV 923
Score = 249 (92.7 bits), Expect = 8.3e-98, Sum P(4) = 8.3e-98
Identities = 53/102 (51%), Positives = 71/102 (69%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ +V IYR VT+ +VEE + + AK+KM
Sbjct: 876 INLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKM 935
Query: 802 MLTHLVVRP-----------GMGGKQAN-FTKQELDDILRFG 831
+L HLV++ G +N F K+EL IL+FG
Sbjct: 936 VLDHLVIQRMDTTGRTVLENNSGRSNSNPFNKEELTAILKFG 977
Score = 72 (30.4 bits), Expect = 1.6e-17, Sum P(3) = 1.6e-17
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 609 DGSTIYLVKWRDLPYDKATWEDEN----EDIPGLKESIEFYNMTKMLDILEDYL 658
+G YL+KW+ Y +TWE E + + GLK+ +E N K D ++ +L
Sbjct: 301 EGEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKK-LE--NFKKKEDEIKQWL 351
Score = 71 (30.1 bits), Expect = 2.7e-106, Sum P(4) = 2.7e-106
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 158 YLVKWRDLPYDKATWEDE 175
YL KW LPY + +WEDE
Sbjct: 415 YLCKWMGLPYSECSWEDE 432
Score = 71 (30.1 bits), Expect = 2.0e-28, Sum P(4) = 2.0e-28
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 614 YLVKWRDLPYDKATWEDE 631
YL KW LPY + +WEDE
Sbjct: 415 YLCKWMGLPYSECSWEDE 432
Score = 68 (29.0 bits), Expect = 5.6e-106, Sum P(4) = 5.6e-106
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 153 DGSTIYLVKWRDLPYDKATWEDEN----EDIPGLKESIEF 188
+G YL+KW+ Y +TWE E + + GLK+ F
Sbjct: 301 EGEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENF 340
Score = 39 (18.8 bits), Expect = 2.7e-106, Sum P(4) = 2.7e-106
Identities = 8/18 (44%), Positives = 9/18 (50%)
Query: 855 NQDPAYWVKLLRHHYEQH 872
N +P W H YEQH
Sbjct: 1655 NNNPP-WGSDRHHQYEQH 1671
Score = 38 (18.4 bits), Expect = 3.5e-106, Sum P(4) = 3.5e-106
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 862 VKLLRHHYEQHQEDVSRTLGKGKR 885
V ++ + EQ +E+ S G GK+
Sbjct: 1184 VSAMQEYEEQLKENASEGKGPGKK 1207
>UNIPROTKB|J9PA90 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:AAEX03002279 EMBL:AAEX03002280
Ensembl:ENSCAFT00000045903 Uniprot:J9PA90
Length = 1840
Score = 710 (255.0 bits), Expect = 2.8e-106, Sum P(4) = 2.8e-106
Identities = 150/353 (42%), Positives = 212/353 (60%)
Query: 236 EKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEG 295
+KQP +L ++L YQLEG+NWL +SW ++ ILADEMGLGKTIQTI+FL LF +
Sbjct: 484 KKQPTYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQH 543
Query: 296 HCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGK 355
GPFL+ PLST+ +W+REFE WAP+ VV Y+GD R +R+++ W +
Sbjct: 544 QLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYE--WIHS------ 595
Query: 356 PCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSI 415
++ +KF+ L+T+YE++ D +LGSI WA L VDEAHRLK++ S +K L +
Sbjct: 596 ----QTKRLKFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKS 651
Query: 416 QNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHM 475
++LL+TGTP PEKF F+ + +E + LH +L P +
Sbjct: 652 HHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFL 710
Query: 476 LRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMD 535
LRR+K DV K++P+K E I+RVE+S +QK+YYK+ILTRN++AL G LNI+M+
Sbjct: 711 LRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVME 770
Query: 536 LKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
LKKCCNH YL EE + GQ + +L R++G E G+R
Sbjct: 771 LKKCCNHCYLIKPP-EENERENGQEVLLSLIRSSGKLILLDKLLTRLRERGNR 822
Score = 330 (121.2 bits), Expect = 2.8e-106, Sum P(4) = 2.8e-106
Identities = 64/110 (58%), Positives = 85/110 (77%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M +MLDIL +YL + Y ++R+DG+I G +R++++D FNA G+ F FLLSTR+GGL
Sbjct: 826 FSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGL 885
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYIN---LATADTV 750
GINLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ K +N L T TV
Sbjct: 886 GINLASADTVVIFDSDWNPQNDLQAQARAHRIGQK-KQVNIYRLVTKGTV 934
Score = 249 (92.7 bits), Expect = 8.6e-98, Sum P(4) = 8.6e-98
Identities = 53/102 (51%), Positives = 71/102 (69%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ +V IYR VT+ +VEE + + AK+KM
Sbjct: 887 INLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKM 946
Query: 802 MLTHLVVRP-----------GMGGKQAN-FTKQELDDILRFG 831
+L HLV++ G +N F K+EL IL+FG
Sbjct: 947 VLDHLVIQRMDTTGRTVLENNSGRSNSNPFNKEELTAILKFG 988
Score = 72 (30.4 bits), Expect = 2.0e-17, Sum P(3) = 2.0e-17
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 606 TLRDGSTI-YLVKWRDLPYDKATWEDEN----EDIPGLKESIEFYNMTKMLDILEDYL 658
T +D S + YL+KW+ Y +TWE E + + GLK+ +E N K D ++ +L
Sbjct: 311 TEKDESEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKK-LE--NFKKKEDEIKQWL 365
Score = 71 (30.1 bits), Expect = 2.8e-106, Sum P(4) = 2.8e-106
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 158 YLVKWRDLPYDKATWEDE 175
YL KW LPY + +WEDE
Sbjct: 426 YLCKWMGLPYSECSWEDE 443
Score = 71 (30.1 bits), Expect = 2.6e-28, Sum P(4) = 2.6e-28
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 614 YLVKWRDLPYDKATWEDE 631
YL KW LPY + +WEDE
Sbjct: 426 YLCKWMGLPYSECSWEDE 443
Score = 68 (29.0 bits), Expect = 5.8e-106, Sum P(4) = 5.8e-106
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 150 TLRDGSTI-YLVKWRDLPYDKATWEDEN----EDIPGLKESIEF 188
T +D S + YL+KW+ Y +TWE E + + GLK+ F
Sbjct: 311 TEKDESEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENF 354
Score = 38 (18.4 bits), Expect = 2.8e-106, Sum P(4) = 2.8e-106
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 862 VKLLRHHYEQHQEDVSRTLGKGKR 885
V ++ + EQ +E+ S G GK+
Sbjct: 1195 VSAMQEYEEQLKENASEGKGPGKK 1218
Score = 37 (18.1 bits), Expect = 3.6e-106, Sum P(4) = 3.6e-106
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 866 RHH-YEQH 872
RHH YEQH
Sbjct: 1673 RHHQYEQH 1680
>UNIPROTKB|F1NVT7 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 GeneTree:ENSGT00560000077077 EMBL:AADN02019534
EMBL:AADN02019532 EMBL:AADN02019533 IPI:IPI00818616
Ensembl:ENSGALT00000040615 ArrayExpress:F1NVT7 Uniprot:F1NVT7
Length = 1257
Score = 700 (251.5 bits), Expect = 5.4e-106, Sum P(3) = 5.4e-106
Identities = 159/383 (41%), Positives = 224/383 (58%)
Query: 204 ELQEDEDGASGSKPRRYTPPPE-----KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGIN 258
EL+ED D + PPE +P ++ +K EK + + QL YQLEG+N
Sbjct: 335 ELEEDVDPVKIKEFEALQIPPEIKHMERPASESWQKLEKSREYKNSN--QLREYQLEGMN 392
Query: 259 WLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFE 318
WL ++W + ILADEMGLGKTIQ+ITFL +F G GPFL+ APLSTI NWEREF
Sbjct: 393 WLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLMG-IHGPFLIIAPLSTITNWEREFR 451
Query: 319 TWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYELITN 378
TW + + Y G + R +++ +++ + DT G P KF V++T++E+I
Sbjct: 452 TWT-EMNAIVYHGSQISRQMIQQYEMVYRDTQ---GNPL---PGIFKFQVVITTFEMILA 504
Query: 379 DVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXX 438
D L I+W +V+DEAHRLK+ K + L ++++K+LLTGTP
Sbjct: 505 DCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLN 564
Query: 439 XXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVE 498
P++F T+F EF D+ EEQVK+L +L P MLRRLK DV KN+ K E I+ VE
Sbjct: 565 FLEPQQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVE 624
Query: 499 LSPMQKKYYKYILTRNFEALNPKGGGQQ--VSLLNIMMDLKKCCNHPYLFPAAAEE---- 552
L+ +QKKYY+ IL +NF L+ KG Q +L+N MM+L+KCCNHPYL A E+
Sbjct: 625 LTNIQKKYYRAILEKNFSFLS-KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILED 683
Query: 553 -----APVQGGQYEIQALTRAAG 570
+P + +++QA+ +AAG
Sbjct: 684 FRKTHSP-EAPDFQLQAMIQAAG 705
Score = 324 (119.1 bits), Expect = 5.4e-106, Sum P(3) = 5.4e-106
Identities = 93/273 (34%), Positives = 137/273 (50%)
Query: 635 IPGLKESIEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVF 694
I G + + F M + LDILEDYL Y YERIDG + G++RQ +IDRF P + +FVF
Sbjct: 718 IAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVF 777
Query: 695 LLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYD 754
LL TR+GGLGINL ADT II+DSDWNP ND+QA +R HRIGQ +K + + T Y+
Sbjct: 778 LLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ-SKAVKVYRLITRNSYE 836
Query: 755 SDWNPHNDIQAFSRAH-RIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMG 813
+ F +A ++G V+ + + R V Q++K M + L+ + G
Sbjct: 837 REM--------FDKASLKLGLDKAVL--QDINRKGGTNGVQQLSK--MEVEDLLRKGAYG 884
Query: 814 G------KQANFTKQELDDILRFGTXXXXXXXX---XXXXXXXII----KQEAENQDPAY 860
+ + F ++++D IL+ T + + + DP +
Sbjct: 885 ALMDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVASGNRTDISLDDPNF 944
Query: 861 W---VKLLRHHYEQHQEDVSRTLGKGKRVRKQT 890
W K+ + E S + + RVRKQT
Sbjct: 945 WQKWAKIAELDTDAKNEKESLVIDR-PRVRKQT 976
Score = 86 (35.3 bits), Expect = 5.4e-106, Sum P(3) = 5.4e-106
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 137 PEWLIANRVINSKTLRD---GSTI--YLVKWRDLPYDKATWEDENEDIPGLK 183
P+++ +R++ +D G + YLVKW LPY+++TWE E ED+ +K
Sbjct: 294 PDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELE-EDVDPVK 344
Score = 86 (35.3 bits), Expect = 2.5e-28, Sum P(3) = 2.5e-28
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 593 PEWLIANRVINSKTLRD---GSTI--YLVKWRDLPYDKATWEDENEDIPGLK 639
P+++ +R++ +D G + YLVKW LPY+++TWE E ED+ +K
Sbjct: 294 PDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELE-EDVDPVK 344
Score = 45 (20.9 bits), Expect = 1.1e-101, Sum P(3) = 1.1e-101
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 204 ELQEDEDGASGS---KPRRYTPP--PEKPTTDLRKKYEKQP 239
+L E E G + KP+R P P++P K +K+P
Sbjct: 27 DLGEQEGGEKAAVEVKPKRRREPKEPKEPKKAKEPKKQKEP 67
>UNIPROTKB|G3MXX3 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:DAAA02051958 Ensembl:ENSBTAT00000065179
Uniprot:G3MXX3
Length = 1810
Score = 705 (253.2 bits), Expect = 8.5e-106, Sum P(4) = 8.5e-106
Identities = 149/353 (42%), Positives = 212/353 (60%)
Query: 236 EKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEG 295
+KQP +L ++L YQLEG+NWL +SW ++ ILADEMGLGKTIQTI+FL LF +
Sbjct: 453 KKQPAYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQH 512
Query: 296 HCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGK 355
GPFL+ PLST+ +W+REFE WAP+ VV Y+GD R +R+++ W +
Sbjct: 513 QLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYE--WIHS------ 564
Query: 356 PCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSI 415
++ +KF+ L+T+YE++ D +LGSI WA L VDEAHRLK++ S +K L +
Sbjct: 565 ----QTKRLKFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKS 620
Query: 416 QNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHM 475
++LL+TGTP PEKF F+ + +E + LH +L P +
Sbjct: 621 NHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFL 679
Query: 476 LRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMD 535
LRR+K DV K++P+K E I+RVE+S +QK+YYK+ILTRN++AL G LNI+M+
Sbjct: 680 LRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVME 739
Query: 536 LKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
LKKCCNH +L EE + GQ + +L R++G E G+R
Sbjct: 740 LKKCCNHCHLIKPP-EENERENGQEVLLSLIRSSGKLILLDKLLTRLRERGNR 791
Score = 330 (121.2 bits), Expect = 8.5e-106, Sum P(4) = 8.5e-106
Identities = 64/110 (58%), Positives = 85/110 (77%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M +MLDIL +YL + Y ++R+DG+I G +R++++D FNA G+ F FLLSTR+GGL
Sbjct: 795 FSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGL 854
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYIN---LATADTV 750
GINLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ K +N L T TV
Sbjct: 855 GINLASADTVVIFDSDWNPQNDLQAQARAHRIGQK-KQVNIYRLVTKGTV 903
Score = 249 (92.7 bits), Expect = 2.6e-97, Sum P(4) = 2.6e-97
Identities = 53/102 (51%), Positives = 71/102 (69%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ +V IYR VT+ +VEE + + AK+KM
Sbjct: 856 INLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKM 915
Query: 802 MLTHLVVRP-----------GMGGKQAN-FTKQELDDILRFG 831
+L HLV++ G +N F K+EL IL+FG
Sbjct: 916 VLDHLVIQRMDTTGRTVLENNSGRSNSNPFNKEELTAILKFG 957
Score = 72 (30.4 bits), Expect = 1.9e-17, Sum P(3) = 1.9e-17
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 609 DGSTIYLVKWRDLPYDKATWEDEN----EDIPGLKESIEFYNMTKMLDILEDYL 658
+G YL+KW+ Y +TWE E + + GLK+ +E N K D ++ +L
Sbjct: 281 EGEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKK-LE--NFKKKEDEIKQWL 331
Score = 71 (30.1 bits), Expect = 8.5e-106, Sum P(4) = 8.5e-106
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 158 YLVKWRDLPYDKATWEDE 175
YL KW LPY + +WEDE
Sbjct: 395 YLCKWMGLPYSECSWEDE 412
Score = 71 (30.1 bits), Expect = 2.4e-28, Sum P(4) = 2.4e-28
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 614 YLVKWRDLPYDKATWEDE 631
YL KW LPY + +WEDE
Sbjct: 395 YLCKWMGLPYSECSWEDE 412
Score = 68 (29.0 bits), Expect = 1.8e-105, Sum P(4) = 1.8e-105
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 153 DGSTIYLVKWRDLPYDKATWEDEN----EDIPGLKESIEF 188
+G YL+KW+ Y +TWE E + + GLK+ F
Sbjct: 281 EGEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENF 320
Score = 38 (18.4 bits), Expect = 8.5e-106, Sum P(4) = 8.5e-106
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 862 VKLLRHHYEQHQEDVSRTLGKGKR 885
V ++ + EQ +E+ S G GK+
Sbjct: 1164 VSAMQEYEEQLKENASEGKGPGKK 1187
Score = 37 (18.1 bits), Expect = 1.1e-105, Sum P(4) = 1.1e-105
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 866 RHH-YEQH 872
RHH YEQH
Sbjct: 1643 RHHQYEQH 1650
>UNIPROTKB|E1BPM4 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060324 "face development" evidence=IEA] [GO:0060123
"regulation of growth hormone secretion" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0050890 "cognition"
evidence=IEA] [GO:0048844 "artery morphogenesis" evidence=IEA]
[GO:0048752 "semicircular canal morphogenesis" evidence=IEA]
[GO:0043584 "nose development" evidence=IEA] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030540 "female genitalia development" evidence=IEA]
[GO:0030217 "T cell differentiation" evidence=IEA] [GO:0021545
"cranial nerve development" evidence=IEA] [GO:0008015 "blood
circulation" evidence=IEA] [GO:0007628 "adult walking behavior"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0008015
GO:GO:0003007 GO:GO:0050890 GO:GO:0001701 GO:GO:0040018
GO:GO:0007417 GO:GO:0003682 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 EMBL:DAAA02038386
EMBL:DAAA02038387 EMBL:DAAA02038388 IPI:IPI00697020
Ensembl:ENSBTAT00000026607 Uniprot:E1BPM4
Length = 2940
Score = 709 (254.6 bits), Expect = 1.0e-105, Sum P(4) = 1.0e-105
Identities = 165/411 (40%), Positives = 236/411 (57%)
Query: 225 EKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQT 284
E+P D KK E + ++ +L YQLEG+NWL ++W + ILADEMGLGKTIQ+
Sbjct: 896 ERPPADDWKKSESSREYKNNN--KLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQS 953
Query: 285 ITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 344
ITFLY ++ +G GPFLV APLSTI NWEREF TW + VV Y G + R ++ +++
Sbjct: 954 ITFLYEIYLKG-IHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEM 1011
Query: 345 SWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQS 404
++D +G R+ + KFH ++T++E+I D L +I W +V+DEAHRLK+
Sbjct: 1012 YFKDP--QG----RVIKGSYKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNC 1065
Query: 405 KFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQV 464
K + L +++K+LLTGTP P +F T+F EF D+ EEQV
Sbjct: 1066 KLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPTRFPSETTFMQEFGDLKTEEQV 1125
Query: 465 KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGG 524
++L +L P MLRRLK DV KN+ K E I+ VEL+ +QKKYY+ IL +NF L+ KGGG
Sbjct: 1126 QKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFAFLS-KGGG 1184
Query: 525 QQ--VSLLNIMMDLKKCCNHPYLFPAAAEEA--------PVQGGQYEIQALTRAAGXXXX 574
Q +LLN MM+L+KCCNHPYL A E+ +++QA+ +AAG
Sbjct: 1185 QANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVL 1244
Query: 575 XXXXXXXXXEDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDK 625
GHR LI ++++ + + YL++ R PY++
Sbjct: 1245 IDKLLPKLKAGGHRV------LIFSQMVRCLDILED---YLIQ-RRYPYER 1285
Score = 325 (119.5 bits), Expect = 1.0e-105, Sum P(4) = 1.0e-105
Identities = 78/193 (40%), Positives = 115/193 (59%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M + LDILEDYL Y YERIDG + G++RQ +IDRF+ P + +FVFLL TR+GGL
Sbjct: 1262 FSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL 1321
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDI 763
GINL ADT II+DSDWNP ND+QA +R HRIGQ +K + + T Y+ +
Sbjct: 1322 GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ-SKSVKIYRLITRNSYEREM------ 1374
Query: 764 QAFSRAH-RIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGG-------K 815
F +A ++G +K ++ R + V Q++K+++ ++R G G +
Sbjct: 1375 --FDKASLKLGL-DKAVLQSMSGRENAPNGVQQLSKKEI---EDLLRKGAYGALMDEEDE 1428
Query: 816 QANFTKQELDDIL 828
+ F ++++D IL
Sbjct: 1429 GSKFCEEDIDQIL 1441
Score = 214 (80.4 bits), Expect = 4.3e-94, Sum P(4) = 4.3e-94
Identities = 50/115 (43%), Positives = 65/115 (56%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
P +D F R G INL ADT II+DSDWNP ND+QA +R HRIGQ V IY
Sbjct: 1305 PDSDRFVFLLCTRAGGLG--INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIY 1362
Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQA-----NFTKQELDDILRFG 831
R +TRNS E + A K+ L V++ G + A +K+E++D+LR G
Sbjct: 1363 RLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENAPNGVQQLSKKEIEDLLRKG 1417
Score = 77 (32.2 bits), Expect = 1.0e-105, Sum P(4) = 1.0e-105
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 137 PEWLIANRVIN-SKTLRD-GSTI--YLVKWRDLPYDKATWEDENEDIPGLK-ESIE 187
P+++ +R+++ +++ D G + YLVKW LPY+ +TWE +DI K E E
Sbjct: 829 PDYVEVDRIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWE-LRQDIDQAKIEEFE 883
Score = 77 (32.2 bits), Expect = 1.8e-25, Sum P(4) = 1.8e-25
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 593 PEWLIANRVIN-SKTLRD-GSTI--YLVKWRDLPYDKATWEDENEDIPGLK-ESIE 643
P+++ +R+++ +++ D G + YLVKW LPY+ +TWE +DI K E E
Sbjct: 829 PDYVEVDRIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWE-LRQDIDQAKIEEFE 883
Score = 46 (21.3 bits), Expect = 1.0e-105, Sum P(4) = 1.0e-105
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 945 EELL--SDMKSDVSRLPATLARIPP 967
+EL+ SD++SD P T R PP
Sbjct: 1521 DELMEFSDLESDSEEKPCTKPRRPP 1545
Score = 41 (19.5 bits), Expect = 6.1e-102, Sum P(4) = 6.1e-102
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 204 ELQEDE-DGASGSKPRRYTPPPEKPTTDLRKKYEKQPP 240
EL + DG+ K ++ P +K + ++ EK+ P
Sbjct: 577 ELNRNSLDGSQEEKKKKKRPKAKKDPKEPKEPKEKKEP 614
>UNIPROTKB|Q06A37 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOVERGEN:HBG081150 EMBL:DQ978381 IPI:IPI00590082
RefSeq:NP_001071054.1 UniGene:Gga.20865 ProteinModelPortal:Q06A37
SMR:Q06A37 GeneID:421140 KEGG:gga:421140 CTD:55636
HOGENOM:HOG000246942 InParanoid:Q06A37 KO:K14437 OrthoDB:EOG4MCWZD
NextBio:20823957 Uniprot:Q06A37
Length = 3011
Score = 710 (255.0 bits), Expect = 1.5e-105, Sum P(4) = 1.5e-105
Identities = 165/411 (40%), Positives = 236/411 (57%)
Query: 225 EKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQT 284
E+P D KK E + ++ +L YQLEG+NWL ++W + ILADEMGLGKTIQ+
Sbjct: 947 ERPPADDWKKSESSREYKNNN--KLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQS 1004
Query: 285 ITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 344
ITFLY ++ +G GPFLV APLSTI NWEREF TW + VV Y G + R ++ +++
Sbjct: 1005 ITFLYEIYLKG-IHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEM 1062
Query: 345 SWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQS 404
++D +G R+ + KFH ++T++E+I D L +I W +V+DEAHRLK+
Sbjct: 1063 YFKDP--QG----RVIKGSYKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNC 1116
Query: 405 KFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQV 464
K + L +++K+LLTGTP P +F T+F EF D+ EEQV
Sbjct: 1117 KLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPGRFPSETTFMQEFGDLKTEEQV 1176
Query: 465 KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGG 524
++L +L P MLRRLK DV KN+ K E I+ VEL+ +QKKYY+ IL +NF L+ KGGG
Sbjct: 1177 QKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFAFLS-KGGG 1235
Query: 525 QQ--VSLLNIMMDLKKCCNHPYLFPAAAEEA--------PVQGGQYEIQALTRAAGXXXX 574
Q +LLN MM+L+KCCNHPYL A E+ +++QA+ +AAG
Sbjct: 1236 QANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVL 1295
Query: 575 XXXXXXXXXEDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDK 625
GHR LI ++++ + + YL++ R PY++
Sbjct: 1296 IDKLLPKLKAGGHRV------LIFSQMVRCLDILED---YLIQ-RRYPYER 1336
Score = 325 (119.5 bits), Expect = 1.5e-105, Sum P(4) = 1.5e-105
Identities = 78/193 (40%), Positives = 115/193 (59%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M + LDILEDYL Y YERIDG + G++RQ +IDRF+ P + +FVFLL TR+GGL
Sbjct: 1313 FSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGL 1372
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDI 763
GINL ADT II+DSDWNP ND+QA +R HRIGQ +K + + T Y+ +
Sbjct: 1373 GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ-SKSVKIYRLITRNSYEREM------ 1425
Query: 764 QAFSRAH-RIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGG-------K 815
F +A ++G +K ++ R + V Q++K+++ ++R G G +
Sbjct: 1426 --FDKASLKLGL-DKAVLQSMSGRENATNGVQQLSKKEI---EDLLRKGAYGALMDEEDE 1479
Query: 816 QANFTKQELDDIL 828
+ F ++++D IL
Sbjct: 1480 GSKFCEEDIDQIL 1492
Score = 214 (80.4 bits), Expect = 6.3e-94, Sum P(4) = 6.3e-94
Identities = 50/115 (43%), Positives = 65/115 (56%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
P +D F R G INL ADT II+DSDWNP ND+QA +R HRIGQ V IY
Sbjct: 1356 PDSDRFVFLLCTRAGGLG--INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIY 1413
Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQAN-----FTKQELDDILRFG 831
R +TRNS E + A K+ L V++ G + A +K+E++D+LR G
Sbjct: 1414 RLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKG 1468
Score = 81 (33.6 bits), Expect = 1.5e-105, Sum P(4) = 1.5e-105
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 137 PEWLIANRVIN-SKTLRDGS---TIYLVKWRDLPYDKATWEDENEDIPGLK-ESIE 187
P+++ +R+++ S++ D T YLVKW LPY+ +TWE + +DI K E E
Sbjct: 880 PDYVEIDRILDFSRSTDDNGEPVTHYLVKWCSLPYEDSTWELK-QDIDQAKIEEFE 934
Score = 81 (33.6 bits), Expect = 6.0e-26, Sum P(3) = 6.0e-26
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 593 PEWLIANRVIN-SKTLRDGS---TIYLVKWRDLPYDKATWEDENEDIPGLK-ESIE 643
P+++ +R+++ S++ D T YLVKW LPY+ +TWE + +DI K E E
Sbjct: 880 PDYVEIDRILDFSRSTDDNGEPVTHYLVKWCSLPYEDSTWELK-QDIDQAKIEEFE 934
Score = 41 (19.5 bits), Expect = 2.4e-74, Sum P(3) = 2.4e-74
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 656 DYLDGEGYKYERIDGNITGSMRQESIDR 683
D +G +K E N+ GS +ES+D+
Sbjct: 2954 DKTEGTAFKDEE---NLEGSDAEESLDK 2978
Score = 40 (19.1 bits), Expect = 1.5e-105, Sum P(4) = 1.5e-105
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 945 EELL--SDMKSDVSRLPATLARIP 966
+EL+ SD++SD P+T R P
Sbjct: 1572 DELMEFSDLESDSEEKPSTKPRRP 1595
>UNIPROTKB|Q9P2D1 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0007512 "adult heart development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0007628 "adult
walking behavior" evidence=IEA] [GO:0008015 "blood circulation"
evidence=IEA] [GO:0030540 "female genitalia development"
evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IEA] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0003007 "heart morphogenesis"
evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
[GO:0043584 "nose development" evidence=IMP] [GO:0048806 "genitalia
development" evidence=IMP] [GO:0060021 "palate development"
evidence=IMP] [GO:0060041 "retina development in camera-type eye"
evidence=IMP] [GO:0001501 "skeletal system development"
evidence=IMP] [GO:0050890 "cognition" evidence=IMP] [GO:0007417
"central nervous system development" evidence=IMP] [GO:0021545
"cranial nerve development" evidence=IMP] [GO:0060123 "regulation
of growth hormone secretion" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=TAS] [GO:0030217 "T cell differentiation"
evidence=IMP] [GO:0060173 "limb development" evidence=IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0060324 "face development" evidence=IMP]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0008015 GO:GO:0003007 GO:GO:0050890
GO:GO:0001701 GO:GO:0040018 GO:GO:0007417 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 GO:GO:0048806 GO:GO:0042472
GO:GO:0001501 GO:GO:0060041 GO:GO:0007605 GO:GO:0007512
GO:GO:0004386 GO:GO:0035116 GO:GO:0060324 GO:GO:0060021
GO:GO:0060173 GO:GO:0048844 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150 CTD:55636
KO:K14437 OrthoDB:EOG4MCWZD EMBL:AC023102 EMBL:AC113143
EMBL:AB037837 EMBL:AK000364 EMBL:AK000368 EMBL:BC014681
EMBL:BC051264 EMBL:BC053890 EMBL:BC068000 EMBL:BC080627
EMBL:BC110818 IPI:IPI00472901 IPI:IPI00794880 RefSeq:NP_060250.2
UniGene:Hs.20395 UniGene:Hs.733236 PDB:2CKC PDB:2V0E PDB:2V0F
PDBsum:2CKC PDBsum:2V0E PDBsum:2V0F ProteinModelPortal:Q9P2D1
SMR:Q9P2D1 DIP:DIP-48685N IntAct:Q9P2D1 STRING:Q9P2D1
PhosphoSite:Q9P2D1 DMDM:148877246 PaxDb:Q9P2D1 PRIDE:Q9P2D1
Ensembl:ENST00000307121 Ensembl:ENST00000423902
Ensembl:ENST00000525508 GeneID:55636 KEGG:hsa:55636 UCSC:uc003xue.3
GeneCards:GC08P061642 H-InvDB:HIX0007533 HGNC:HGNC:20626 MIM:214800
MIM:608765 MIM:608892 MIM:612370 neXtProt:NX_Q9P2D1 Orphanet:138
Orphanet:478 Orphanet:432 PharmGKB:PA134948695 InParanoid:Q9P2D1
OMA:TFGVIFD EvolutionaryTrace:Q9P2D1 GenomeRNAi:55636 NextBio:60291
ArrayExpress:Q9P2D1 Bgee:Q9P2D1 CleanEx:HS_CHD7
Genevestigator:Q9P2D1 GermOnline:ENSG00000171316 GO:GO:0021545
GO:GO:0043584 GO:GO:0060123 Uniprot:Q9P2D1
Length = 2997
Score = 712 (255.7 bits), Expect = 1.8e-105, Sum P(4) = 1.8e-105
Identities = 165/411 (40%), Positives = 237/411 (57%)
Query: 225 EKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQT 284
E+P D KK E + ++ +L YQLEG+NWL ++W + ILADEMGLGKTIQ+
Sbjct: 946 ERPPADDWKKSESSREYKNNN--KLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQS 1003
Query: 285 ITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 344
ITFLY ++ +G GPFLV APLSTI NWEREF TW + VV Y G + R ++ +++
Sbjct: 1004 ITFLYEIYLKG-IHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEM 1061
Query: 345 SWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQS 404
++D +G R+ + KFH ++T++E+I D L +I W +V+DEAHRLK+
Sbjct: 1062 YFKDP--QG----RVIKGSYKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNC 1115
Query: 405 KFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQV 464
K + L +++K+LLTGTP P +F T+F EF D+ EEQV
Sbjct: 1116 KLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDLKTEEQV 1175
Query: 465 KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGG 524
++L +L P MLRRLK DV KN+ K E I+ VEL+ +QKKYY+ IL +NF L+ KGGG
Sbjct: 1176 QKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLS-KGGG 1234
Query: 525 QQ--VSLLNIMMDLKKCCNHPYLFPAAAEEA--------PVQGGQYEIQALTRAAGXXXX 574
Q +LLN MM+L+KCCNHPYL A E+ + +++QA+ +AAG
Sbjct: 1235 QANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVL 1294
Query: 575 XXXXXXXXXEDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDK 625
GHR LI ++++ + + YL++ R PY++
Sbjct: 1295 IDKLLPKLKAGGHRV------LIFSQMVRCLDILED---YLIQ-RRYPYER 1335
Score = 325 (119.5 bits), Expect = 1.8e-105, Sum P(4) = 1.8e-105
Identities = 78/193 (40%), Positives = 115/193 (59%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M + LDILEDYL Y YERIDG + G++RQ +IDRF+ P + +FVFLL TR+GGL
Sbjct: 1312 FSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL 1371
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDI 763
GINL ADT II+DSDWNP ND+QA +R HRIGQ +K + + T Y+ +
Sbjct: 1372 GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ-SKSVKIYRLITRNSYEREM------ 1424
Query: 764 QAFSRAH-RIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGG-------K 815
F +A ++G +K ++ R + V Q++K+++ ++R G G +
Sbjct: 1425 --FDKASLKLGL-DKAVLQSMSGRENATNGVQQLSKKEI---EDLLRKGAYGALMDEEDE 1478
Query: 816 QANFTKQELDDIL 828
+ F ++++D IL
Sbjct: 1479 GSKFCEEDIDQIL 1491
Score = 214 (80.4 bits), Expect = 7.8e-94, Sum P(4) = 7.8e-94
Identities = 50/115 (43%), Positives = 65/115 (56%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
P +D F R G INL ADT II+DSDWNP ND+QA +R HRIGQ V IY
Sbjct: 1355 PDSDRFVFLLCTRAGGLG--INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIY 1412
Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQAN-----FTKQELDDILRFG 831
R +TRNS E + A K+ L V++ G + A +K+E++D+LR G
Sbjct: 1413 RLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKG 1467
Score = 80 (33.2 bits), Expect = 1.8e-105, Sum P(4) = 1.8e-105
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 137 PEWLIANRVIN-SKTLRD-GSTI--YLVKWRDLPYDKATWEDENEDIPGLK-ESIE 187
P+++ +R+++ +++ D G + YLVKW LPY+ +TWE +DI K E E
Sbjct: 879 PDYVEVDRIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWE-RRQDIDQAKIEEFE 933
Score = 80 (33.2 bits), Expect = 1.7e-24, Sum P(4) = 1.7e-24
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 593 PEWLIANRVIN-SKTLRD-GSTI--YLVKWRDLPYDKATWEDENEDIPGLK-ESIE 643
P+++ +R+++ +++ D G + YLVKW LPY+ +TWE +DI K E E
Sbjct: 879 PDYVEVDRIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWE-RRQDIDQAKIEEFE 933
Score = 38 (18.4 bits), Expect = 1.8e-105, Sum P(4) = 1.8e-105
Identities = 7/30 (23%), Positives = 14/30 (46%)
Query: 953 SDVSRLPATLARIPPVAQRLHMSERSILSR 982
S ++ L + PPV H+ + +L +
Sbjct: 2141 SSLNPLAVGFVQTPPVISSAHIQDERVLEQ 2170
Score = 37 (18.1 bits), Expect = 5.9e-101, Sum P(4) = 5.9e-101
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 206 QEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQP 239
QE++ SK ++ P++P KK K+P
Sbjct: 638 QEEKKKKKRSKAKK---DPKEPKEPKEKKEPKEP 668
>UNIPROTKB|F1PWD8 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 OMA:TFGVIFD EMBL:AAEX03015818
EMBL:AAEX03015819 EMBL:AAEX03015820 Ensembl:ENSCAFT00000011497
GeneTree:ENSGT00700000105087 Uniprot:F1PWD8
Length = 2994
Score = 714 (256.4 bits), Expect = 2.3e-105, Sum P(4) = 2.3e-105
Identities = 165/411 (40%), Positives = 236/411 (57%)
Query: 225 EKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQT 284
E+P D KK E + ++ +L YQLEG+NWL ++W + ILADEMGLGKTIQ+
Sbjct: 945 ERPPADDWKKSESSREYKNNN--KLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQS 1002
Query: 285 ITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 344
ITFLY ++ +G GPFLV APLSTI NWEREF TW + VV Y G + R ++ +++
Sbjct: 1003 ITFLYEIYLKG-IHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQSYEM 1060
Query: 345 SWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQS 404
++D +G R+ + KFH ++T++E+I D L +I W +V+DEAHRLK+
Sbjct: 1061 YFKDP--QG----RVIKGSYKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNC 1114
Query: 405 KFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQV 464
K + L +++K+LLTGTP P +F T+F EF D+ EEQV
Sbjct: 1115 KLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDLKTEEQV 1174
Query: 465 KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGG 524
++L +L P MLRRLK DV KN+ K E I+ VEL+ +QKKYY+ IL +NF L+ KGGG
Sbjct: 1175 QKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLS-KGGG 1233
Query: 525 QQ--VSLLNIMMDLKKCCNHPYLFPAAAEEA--------PVQGGQYEIQALTRAAGXXXX 574
Q +LLN MM+L+KCCNHPYL A E+ +++QA+ +AAG
Sbjct: 1234 QANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVL 1293
Query: 575 XXXXXXXXXEDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDK 625
GHR LI ++++ + + YL++ R PY++
Sbjct: 1294 IDKLLPKLKAGGHRV------LIFSQMVRCLDILED---YLIQ-RRYPYER 1334
Score = 325 (119.5 bits), Expect = 2.3e-105, Sum P(4) = 2.3e-105
Identities = 78/193 (40%), Positives = 115/193 (59%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M + LDILEDYL Y YERIDG + G++RQ +IDRF+ P + +FVFLL TR+GGL
Sbjct: 1311 FSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL 1370
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDI 763
GINL ADT II+DSDWNP ND+QA +R HRIGQ +K + + T Y+ +
Sbjct: 1371 GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ-SKSVKIYRLITRNSYEREM------ 1423
Query: 764 QAFSRAH-RIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGG-------K 815
F +A ++G +K ++ R + V Q++K+++ ++R G G +
Sbjct: 1424 --FDKASLKLGL-DKAVLQSMSGRENATNGVQQLSKKEI---EDLLRKGAYGALMDEEDE 1477
Query: 816 QANFTKQELDDIL 828
+ F ++++D IL
Sbjct: 1478 GSKFCEEDIDQIL 1490
Score = 214 (80.4 bits), Expect = 9.8e-94, Sum P(4) = 9.8e-94
Identities = 50/115 (43%), Positives = 65/115 (56%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
P +D F R G INL ADT II+DSDWNP ND+QA +R HRIGQ V IY
Sbjct: 1354 PDSDRFVFLLCTRAGGLG--INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIY 1411
Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQAN-----FTKQELDDILRFG 831
R +TRNS E + A K+ L V++ G + A +K+E++D+LR G
Sbjct: 1412 RLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKG 1466
Score = 76 (31.8 bits), Expect = 2.3e-105, Sum P(4) = 2.3e-105
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 137 PEWLIANRVINSKTLRD--GSTI--YLVKWRDLPYDKATWEDENEDIPGLK-ESIE 187
P+++ +R+++ D G + YLVKW LPY+ +TWE +DI K E E
Sbjct: 878 PDYVEVDRIMDFARSTDERGEPVTHYLVKWCSLPYEDSTWE-LRQDIDQAKIEEFE 932
Score = 76 (31.8 bits), Expect = 1.6e-24, Sum P(4) = 1.6e-24
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 593 PEWLIANRVINSKTLRD--GSTI--YLVKWRDLPYDKATWEDENEDIPGLK-ESIE 643
P+++ +R+++ D G + YLVKW LPY+ +TWE +DI K E E
Sbjct: 878 PDYVEVDRIMDFARSTDERGEPVTHYLVKWCSLPYEDSTWE-LRQDIDQAKIEEFE 932
Score = 40 (19.1 bits), Expect = 1.4e-101, Sum P(4) = 1.4e-101
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 204 ELQEDE-DGASGSKPRRYTPP----PEKPTTDLRKKYEKQP 239
EL + DG+ K ++ P P++P KK K+P
Sbjct: 627 ELNRNSLDGSQEEKKKKKRPKVKKDPKEPKEPKEKKEPKEP 667
Score = 39 (18.8 bits), Expect = 2.3e-105, Sum P(4) = 2.3e-105
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 945 EELL--SDMKSDVSRLPATLARIP 966
+EL+ SD++SD P T R P
Sbjct: 1570 DELMEFSDLESDSEEKPCTKPRRP 1593
>UNIPROTKB|H3BTW3 [details] [associations]
symbol:CHD9 "Chromodomain-helicase-DNA-binding protein 9"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00384 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 EMBL:AC007906
EMBL:AC079416 HGNC:HGNC:25701 Ensembl:ENST00000565803 Bgee:H3BTW3
Uniprot:H3BTW3
Length = 1099
Score = 682 (245.1 bits), Expect = 2.9e-105, Sum P(3) = 2.9e-105
Identities = 147/348 (42%), Positives = 212/348 (60%)
Query: 207 EDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQ 266
E+ + S+P T ++P +++ KK ++ + + G QL YQLEG+NWL ++W
Sbjct: 348 EEFEQLQASRPD--TRRLDRPPSNIWKKIDQSRDYKN--GNQLREYQLEGLNWLLFNWYN 403
Query: 267 NIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYV 326
+ ILADEMGLGKTIQ+ITFLY + G +GPFL+ APLSTI NWEREF TW D V
Sbjct: 404 RRNCILADEMGLGKTIQSITFLYEILLTG-IRGPFLIIAPLSTIANWEREFRTWT-DINV 461
Query: 327 VTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSI 386
V Y G R +++ +++ + D+ +G RI +F ++T++E+I L +I
Sbjct: 462 VVYHGSLISRQMIQQYEMYFRDS--QG----RIIRGAYRFQAIITTFEMILGGCGELNAI 515
Query: 387 EWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFN 446
EW +++DEAHRLK+ K + L ++++K+LLTGTP P +F
Sbjct: 516 EWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFP 575
Query: 447 DLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKY 506
++F EF D+ EEQV++L +L P MLRRLK DV K + K E I+ VEL+ +QKKY
Sbjct: 576 SESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKY 635
Query: 507 YKYILTRNFEALNPKGGGQQ--VSLLNIMMDLKKCCNHPYLFPAAAEE 552
Y+ IL +NF L+ KG GQ +L+N MM+L+KCCNHPYL A E+
Sbjct: 636 YRAILEKNFSFLS-KGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEK 682
Score = 331 (121.6 bits), Expect = 2.9e-105, Sum P(3) = 2.9e-105
Identities = 80/192 (41%), Positives = 115/192 (59%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M + LDILEDYL + Y YERIDG + G++RQ +IDRF+ P + +FVFLL TR+GGL
Sbjct: 730 FSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL 789
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDI 763
GINL ADT II+DSDWNP ND+QA +R HRIGQ NK + + T Y+ +
Sbjct: 790 GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ-NKAVKVYRLVTRNSYEREM------ 842
Query: 764 QAFSRAH-RIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGG------KQ 816
F RA ++G +K ++ R S + Q++K++ + L+ R G +
Sbjct: 843 --FDRASLKLGL-DKAVLQSMSGRESNVGGIQQLSKKE--IEDLLRRGAYGAIMEEEDEG 897
Query: 817 ANFTKQELDDIL 828
+ F ++++D IL
Sbjct: 898 SKFCEEDIDQIL 909
Score = 219 (82.2 bits), Expect = 1.7e-93, Sum P(3) = 1.7e-93
Identities = 51/116 (43%), Positives = 68/116 (58%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
P +D F R G INL ADT II+DSDWNP ND+QA +R HRIGQ V +Y
Sbjct: 773 PDSDRFVFLLCTRAGGLG--INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVY 830
Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQAN------FTKQELDDILRFG 831
R VTRNS E + A K+ L V++ M G+++N +K+E++D+LR G
Sbjct: 831 RLVTRNSYEREMFDRASLKLGLDKAVLQ-SMSGRESNVGGIQQLSKKEIEDLLRRG 885
Score = 83 (34.3 bits), Expect = 2.9e-105, Sum P(3) = 2.9e-105
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 137 PEWLIANRVINSKTLRDGST-----IYLVKWRDLPYDKATWE-DENEDIPGLKE 184
P+++ +RV+ D T YLVKW LPY+ +TWE E+ D+ ++E
Sbjct: 296 PDYVEVDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEE 349
Score = 83 (34.3 bits), Expect = 3.1e-29, Sum P(2) = 3.1e-29
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 593 PEWLIANRVINSKTLRDGST-----IYLVKWRDLPYDKATWE-DENEDIPGLKE 640
P+++ +RV+ D T YLVKW LPY+ +TWE E+ D+ ++E
Sbjct: 296 PDYVEVDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEE 349
Score = 73 (30.8 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 21/72 (29%), Positives = 35/72 (48%)
Query: 614 YLVKWRDLPYDKATWE-DENEDIPGLKESIEFY--------------NMTKMLDILEDYL 658
YLVKW LPY+ +TWE E+ D+ ++E + N+ K +D DY
Sbjct: 322 YLVKWCSLPYEDSTWELKEDVDLAKIEEFEQLQASRPDTRRLDRPPSNIWKKIDQSRDYK 381
Query: 659 DGEGYKYERIDG 670
+G + +++G
Sbjct: 382 NGNQLREYQLEG 393
>UNIPROTKB|F1N734 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 OMA:CKWATME GeneTree:ENSGT00560000077077
EMBL:DAAA02036652 EMBL:DAAA02036653 EMBL:DAAA02036654
EMBL:DAAA02036655 IPI:IPI00924240 Ensembl:ENSBTAT00000061177
ArrayExpress:F1N734 Uniprot:F1N734
Length = 2720
Score = 707 (253.9 bits), Expect = 3.3e-105, Sum P(3) = 3.3e-105
Identities = 160/383 (41%), Positives = 223/383 (58%)
Query: 204 ELQEDEDGASGSKPRRYTPPPE-----KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGIN 258
EL+ED D A + PE +P +D +K EK + + QL YQLEG+N
Sbjct: 412 ELEEDVDPAKVKEFESLQVLPEIKHVERPASDSWQKLEKSREYKNSN--QLREYQLEGMN 469
Query: 259 WLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFE 318
WL ++W + ILADEMGLGKTIQ+ITFL +F G GPFL+ APLSTI NWEREF
Sbjct: 470 WLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLRG-IHGPFLIIAPLSTITNWEREFR 528
Query: 319 TWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYELITN 378
TW + + Y G + R +++ +++ + D G P S KFHV++T++E+I
Sbjct: 529 TWT-EMNAIVYHGSQISRQMIQQYEMVYRDAQ---GNPL---SGVFKFHVVITTFEMILA 581
Query: 379 DVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXX 438
D L I W+ +++DEAHRLK+ K + L ++++K+LLTGTP
Sbjct: 582 DCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLN 641
Query: 439 XXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVE 498
P +F T+F EF D+ EEQVK+L +L P MLRRLK DV KN+ K E I+ VE
Sbjct: 642 FLEPSQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVE 701
Query: 499 LSPMQKKYYKYILTRNFEALNPKGGGQQ--VSLLNIMMDLKKCCNHPYLFPAAAEE---- 552
L+ +QKKYY+ IL +NF L+ KG Q +L+N MM+L+KCCNHPYL A E+
Sbjct: 702 LTNIQKKYYRAILEKNFSFLS-KGANQHNMPNLINTMMELRKCCNHPYLISGAEEKILED 760
Query: 553 -----APVQGGQYEIQALTRAAG 570
+P +++QA+ +AAG
Sbjct: 761 FRKTHSP-DAPDFQLQAMIQAAG 782
Score = 330 (121.2 bits), Expect = 3.3e-105, Sum P(3) = 3.3e-105
Identities = 95/273 (34%), Positives = 137/273 (50%)
Query: 635 IPGLKESIEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVF 694
I G + + F M + LDILEDYL Y YERIDG + G++RQ +IDRF P + +FVF
Sbjct: 795 IAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVF 854
Query: 695 LLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYD 754
LL TR+GGLGINL ADT II+DSDWNP ND+QA +R HRIGQ +K + + T Y+
Sbjct: 855 LLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ-SKAVKVYRLITRNSYE 913
Query: 755 SDWNPHNDIQAFSRAH-RIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMG 813
+ F +A ++G V+ + + R V Q++K M + L+ + G
Sbjct: 914 REM--------FDKASLKLGLDKAVL--QDINRKGSTNGVQQLSK--MEVEDLLRKGAYG 961
Query: 814 G------KQANFTKQELDDILRFGTXXXXXXXX---XXXXXXXII----KQEAENQDPAY 860
+ + F ++++D IL+ T + + + DP +
Sbjct: 962 ALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISLDDPNF 1021
Query: 861 W---VKLLRHHYEQHQEDVSRTLGKGKRVRKQT 890
W K+ E E S L + RVRKQT
Sbjct: 1022 WQKWAKIAELDTEAKSEKESLVLDR-PRVRKQT 1053
Score = 89 (36.4 bits), Expect = 7.0e-28, Sum P(3) = 7.0e-28
Identities = 22/66 (33%), Positives = 39/66 (59%)
Query: 593 PEWLIANRVI---NSKTLRDGSTI--YLVKWRDLPYDKATWEDENEDIPGLKESIEFYNM 647
P+++ +R++ ++K G + YLVKW LPY+++TWE E ED+ K EF ++
Sbjct: 371 PDYVEVDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELE-EDVDPAKVK-EFESL 428
Query: 648 TKMLDI 653
+ +I
Sbjct: 429 QVLPEI 434
Score = 87 (35.7 bits), Expect = 3.3e-105, Sum P(3) = 3.3e-105
Identities = 19/54 (35%), Positives = 34/54 (62%)
Query: 137 PEWLIANRVI---NSKTLRDGSTI--YLVKWRDLPYDKATWE-DENEDIPGLKE 184
P+++ +R++ ++K G + YLVKW LPY+++TWE +E+ D +KE
Sbjct: 371 PDYVEVDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKE 424
Score = 44 (20.5 bits), Expect = 1.1e-100, Sum P(3) = 1.1e-100
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 207 EDEDGASGSKPRRYTPPPEKPTTDLRK-KYEKQP 239
E E A GSK R P ++ +L++ + K+P
Sbjct: 103 EHEGAAKGSKDREPKPKRKREPRELKEPRKAKEP 136
Score = 41 (19.5 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 18/68 (26%), Positives = 27/68 (39%)
Query: 67 PSQNLDFTSFLEVYHPQLLKSYMKKMNNDFTXXXXXXXXXXXXXKRMARLNRHNINDE-- 124
PSQ T+FLE + + +KK+ + K +A I E
Sbjct: 645 PSQFPSETAFLEEFGDLKTEEQVKKLQS-ILKPMMLRRLKDDVEKNLAPKQETIIEVELT 703
Query: 125 ELEKKYYR 132
++KKYYR
Sbjct: 704 NIQKKYYR 711
>UNIPROTKB|F1PTH3 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 OMA:CKWATME GeneTree:ENSGT00560000077077
EMBL:AAEX03013942 EMBL:AAEX03013943 Ensembl:ENSCAFT00000014716
Uniprot:F1PTH3
Length = 2715
Score = 705 (253.2 bits), Expect = 6.8e-105, Sum P(3) = 6.8e-105
Identities = 160/383 (41%), Positives = 222/383 (57%)
Query: 204 ELQEDEDGASGSKPRRYTPPPE-----KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGIN 258
EL+ED D A + PE +P +D +K EK + + QL YQLEG+N
Sbjct: 413 ELEEDVDPAKVKEFESLQVLPEIKHVERPASDSWQKLEKSREYKNSN--QLREYQLEGMN 470
Query: 259 WLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFE 318
WL ++W + ILADEMGLGKTIQ+ITFL +F G GPFL+ APLSTI NWEREF
Sbjct: 471 WLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLRG-IHGPFLIIAPLSTITNWEREFR 529
Query: 319 TWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYELITN 378
TW + + Y G + R +++ +++ + D G P S KFHV++T++E+I
Sbjct: 530 TWT-EMNAIVYHGSQISRQMIQQYEMVYRDAQ---GNPL---SGVFKFHVVITTFEMILA 582
Query: 379 DVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXX 438
D L I W+ +++DEAHRLK+ K + L ++++K+LLTGTP
Sbjct: 583 DCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLN 642
Query: 439 XXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVE 498
P +F T+F EF D+ EEQVK+L +L P MLRRLK DV KN+ K E I+ VE
Sbjct: 643 FLEPSQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVE 702
Query: 499 LSPMQKKYYKYILTRNFEALNPKGGGQQ--VSLLNIMMDLKKCCNHPYLFPAAAEE---- 552
L+ +QKKYY+ IL +NF L KG Q +L+N MM+L+KCCNHPYL A E+
Sbjct: 703 LTNIQKKYYRAILEKNFSFLT-KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILED 761
Query: 553 -----APVQGGQYEIQALTRAAG 570
+P +++QA+ +AAG
Sbjct: 762 FRKTHSP-DAPDFQLQAMIQAAG 783
Score = 328 (120.5 bits), Expect = 6.8e-105, Sum P(3) = 6.8e-105
Identities = 94/273 (34%), Positives = 137/273 (50%)
Query: 635 IPGLKESIEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVF 694
I G + + F M + LDILEDYL Y YERIDG + G++RQ +IDRF P + +FVF
Sbjct: 796 IAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVF 855
Query: 695 LLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYD 754
LL TR+GGLGINL ADT II+DSDWNP ND+QA +R HRIGQ +K + + T Y+
Sbjct: 856 LLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ-SKAVKVYRLITRNSYE 914
Query: 755 SDWNPHNDIQAFSRAH-RIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMG 813
+ F +A ++G V+ + + R V Q++K M + L+ + G
Sbjct: 915 REM--------FDKASLKLGLDKAVL--QDINRKGSTNGVQQLSK--MEVEDLLRKGAYG 962
Query: 814 G------KQANFTKQELDDILRFGTXXXXXXXX---XXXXXXXII----KQEAENQDPAY 860
+ + F ++++D IL+ T + + + DP +
Sbjct: 963 ALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISLDDPNF 1022
Query: 861 W---VKLLRHHYEQHQEDVSRTLGKGKRVRKQT 890
W K+ E E S + + RVRKQT
Sbjct: 1023 WQKWAKIAELDTEAKNEKESLVIDR-PRVRKQT 1054
Score = 90 (36.7 bits), Expect = 1.9e-27, Sum P(3) = 1.9e-27
Identities = 23/66 (34%), Positives = 39/66 (59%)
Query: 593 PEWLIANRVI---NSKTLRDGSTI--YLVKWRDLPYDKATWEDENEDIPGLKESIEFYNM 647
P+++ +RV+ ++K G + YLVKW LPY+++TWE E ED+ K EF ++
Sbjct: 372 PDYVEVDRVLEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELE-EDVDPAKVK-EFESL 429
Query: 648 TKMLDI 653
+ +I
Sbjct: 430 QVLPEI 435
Score = 88 (36.0 bits), Expect = 6.8e-105, Sum P(3) = 6.8e-105
Identities = 20/54 (37%), Positives = 34/54 (62%)
Query: 137 PEWLIANRVI---NSKTLRDGSTI--YLVKWRDLPYDKATWE-DENEDIPGLKE 184
P+++ +RV+ ++K G + YLVKW LPY+++TWE +E+ D +KE
Sbjct: 372 PDYVEVDRVLEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKE 425
Score = 41 (19.5 bits), Expect = 5.9e-100, Sum P(3) = 5.9e-100
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 208 DEDGAS-GSK-----PRRYTPP--PEKPTTDLRKKYEKQP 239
++DGA+ GSK P+R P P++P K K+P
Sbjct: 103 EQDGAAKGSKDREPKPKRKREPREPKEPRKAKEPKRAKEP 142
Score = 41 (19.5 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 18/68 (26%), Positives = 27/68 (39%)
Query: 67 PSQNLDFTSFLEVYHPQLLKSYMKKMNNDFTXXXXXXXXXXXXXKRMARLNRHNINDE-- 124
PSQ T+FLE + + +KK+ + K +A I E
Sbjct: 646 PSQFPSETAFLEEFGDLKTEEQVKKLQS-ILKPMMLRRLKDDVEKNLAPKQETIIEVELT 704
Query: 125 ELEKKYYR 132
++KKYYR
Sbjct: 705 NIQKKYYR 712
Score = 39 (18.8 bits), Expect = 9.6e-100, Sum P(3) = 9.6e-100
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 204 ELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEK 237
E +E ++ +P+R P E D KK K
Sbjct: 123 EPREPKEPRKAKEPKRAKEPKEPKQKDGAKKARK 156
>UNIPROTKB|J9P0F6 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 CTD:84181 KO:K14436 GeneTree:ENSGT00560000077077
EMBL:AAEX03013942 EMBL:AAEX03013943 RefSeq:XP_534421.3
Ensembl:ENSCAFT00000048852 GeneID:477230 KEGG:cfa:477230
Uniprot:J9P0F6
Length = 2715
Score = 705 (253.2 bits), Expect = 6.8e-105, Sum P(3) = 6.8e-105
Identities = 160/383 (41%), Positives = 222/383 (57%)
Query: 204 ELQEDEDGASGSKPRRYTPPPE-----KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGIN 258
EL+ED D A + PE +P +D +K EK + + QL YQLEG+N
Sbjct: 413 ELEEDVDPAKVKEFESLQVLPEIKHVERPASDSWQKLEKSREYKNSN--QLREYQLEGMN 470
Query: 259 WLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFE 318
WL ++W + ILADEMGLGKTIQ+ITFL +F G GPFL+ APLSTI NWEREF
Sbjct: 471 WLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLRG-IHGPFLIIAPLSTITNWEREFR 529
Query: 319 TWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYELITN 378
TW + + Y G + R +++ +++ + D G P S KFHV++T++E+I
Sbjct: 530 TWT-EMNAIVYHGSQISRQMIQQYEMVYRDAQ---GNPL---SGVFKFHVVITTFEMILA 582
Query: 379 DVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXX 438
D L I W+ +++DEAHRLK+ K + L ++++K+LLTGTP
Sbjct: 583 DCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLN 642
Query: 439 XXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVE 498
P +F T+F EF D+ EEQVK+L +L P MLRRLK DV KN+ K E I+ VE
Sbjct: 643 FLEPSQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVE 702
Query: 499 LSPMQKKYYKYILTRNFEALNPKGGGQQ--VSLLNIMMDLKKCCNHPYLFPAAAEE---- 552
L+ +QKKYY+ IL +NF L KG Q +L+N MM+L+KCCNHPYL A E+
Sbjct: 703 LTNIQKKYYRAILEKNFSFLT-KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILED 761
Query: 553 -----APVQGGQYEIQALTRAAG 570
+P +++QA+ +AAG
Sbjct: 762 FRKTHSP-DAPDFQLQAMIQAAG 783
Score = 328 (120.5 bits), Expect = 6.8e-105, Sum P(3) = 6.8e-105
Identities = 94/273 (34%), Positives = 137/273 (50%)
Query: 635 IPGLKESIEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVF 694
I G + + F M + LDILEDYL Y YERIDG + G++RQ +IDRF P + +FVF
Sbjct: 796 IAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVF 855
Query: 695 LLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYD 754
LL TR+GGLGINL ADT II+DSDWNP ND+QA +R HRIGQ +K + + T Y+
Sbjct: 856 LLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ-SKAVKVYRLITRNSYE 914
Query: 755 SDWNPHNDIQAFSRAH-RIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMG 813
+ F +A ++G V+ + + R V Q++K M + L+ + G
Sbjct: 915 REM--------FDKASLKLGLDKAVL--QDINRKGSTNGVQQLSK--MEVEDLLRKGAYG 962
Query: 814 G------KQANFTKQELDDILRFGTXXXXXXXX---XXXXXXXII----KQEAENQDPAY 860
+ + F ++++D IL+ T + + + DP +
Sbjct: 963 ALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISLDDPNF 1022
Query: 861 W---VKLLRHHYEQHQEDVSRTLGKGKRVRKQT 890
W K+ E E S + + RVRKQT
Sbjct: 1023 WQKWAKIAELDTEAKNEKESLVIDR-PRVRKQT 1054
Score = 90 (36.7 bits), Expect = 1.9e-27, Sum P(3) = 1.9e-27
Identities = 23/66 (34%), Positives = 39/66 (59%)
Query: 593 PEWLIANRVI---NSKTLRDGSTI--YLVKWRDLPYDKATWEDENEDIPGLKESIEFYNM 647
P+++ +RV+ ++K G + YLVKW LPY+++TWE E ED+ K EF ++
Sbjct: 372 PDYVEVDRVLEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELE-EDVDPAKVK-EFESL 429
Query: 648 TKMLDI 653
+ +I
Sbjct: 430 QVLPEI 435
Score = 88 (36.0 bits), Expect = 6.8e-105, Sum P(3) = 6.8e-105
Identities = 20/54 (37%), Positives = 34/54 (62%)
Query: 137 PEWLIANRVI---NSKTLRDGSTI--YLVKWRDLPYDKATWE-DENEDIPGLKE 184
P+++ +RV+ ++K G + YLVKW LPY+++TWE +E+ D +KE
Sbjct: 372 PDYVEVDRVLEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKE 425
Score = 41 (19.5 bits), Expect = 5.9e-100, Sum P(3) = 5.9e-100
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 208 DEDGAS-GSK-----PRRYTPP--PEKPTTDLRKKYEKQP 239
++DGA+ GSK P+R P P++P K K+P
Sbjct: 103 EQDGAAKGSKDREPKPKRKREPREPKEPRKAKEPKRAKEP 142
Score = 41 (19.5 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 18/68 (26%), Positives = 27/68 (39%)
Query: 67 PSQNLDFTSFLEVYHPQLLKSYMKKMNNDFTXXXXXXXXXXXXXKRMARLNRHNINDE-- 124
PSQ T+FLE + + +KK+ + K +A I E
Sbjct: 646 PSQFPSETAFLEEFGDLKTEEQVKKLQS-ILKPMMLRRLKDDVEKNLAPKQETIIEVELT 704
Query: 125 ELEKKYYR 132
++KKYYR
Sbjct: 705 NIQKKYYR 712
Score = 39 (18.8 bits), Expect = 9.6e-100, Sum P(3) = 9.6e-100
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 204 ELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEK 237
E +E ++ +P+R P E D KK K
Sbjct: 123 EPREPKEPRKAKEPKRAKEPKEPKQKDGAKKARK 156
>UNIPROTKB|Q8TD26 [details] [associations]
symbol:CHD6 "Chromodomain-helicase-DNA-binding protein 6"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0007399 "nervous system development" evidence=NAS] [GO:0003682
"chromatin binding" evidence=NAS] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0007399 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0006338
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 CleanEx:HS_CHD5 EMBL:AY034072
EMBL:AL121674 EMBL:AL031669 EMBL:AL031667 EMBL:BC021907
EMBL:BC039860 EMBL:BC040016 EMBL:AF525085 EMBL:AB037756
EMBL:AK026022 IPI:IPI00220289 IPI:IPI00395823 IPI:IPI00513717
RefSeq:NP_115597.3 UniGene:Hs.740645 UniGene:Hs.741381 PDB:2EPB
PDBsum:2EPB ProteinModelPortal:Q8TD26 SMR:Q8TD26 IntAct:Q8TD26
MINT:MINT-1197235 STRING:Q8TD26 PhosphoSite:Q8TD26 DMDM:296439466
PaxDb:Q8TD26 PRIDE:Q8TD26 Ensembl:ENST00000373222
Ensembl:ENST00000373233 Ensembl:ENST00000440647 GeneID:84181
KEGG:hsa:84181 UCSC:uc002xka.1 UCSC:uc002xkc.3 CTD:84181
GeneCards:GC20M040030 H-InvDB:HIX0015824 H-InvDB:HIX0027712
HGNC:HGNC:19057 neXtProt:NX_Q8TD26 PharmGKB:PA134974700
HOVERGEN:HBG081150 InParanoid:Q8TD26 KO:K14436 OMA:CKWATME
OrthoDB:EOG4NP72J PhylomeDB:Q8TD26 ChiTaRS:CHD6
EvolutionaryTrace:Q8TD26 GenomeRNAi:84181 NextBio:73559
ArrayExpress:Q8TD26 Bgee:Q8TD26 CleanEx:HS_CHD6
Genevestigator:Q8TD26 GermOnline:ENSG00000124177 Uniprot:Q8TD26
Length = 2715
Score = 705 (253.2 bits), Expect = 1.1e-104, Sum P(3) = 1.1e-104
Identities = 160/383 (41%), Positives = 222/383 (57%)
Query: 204 ELQEDEDGASGSKPRRYTPPPE-----KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGIN 258
EL+ED D A + PE +P +D +K EK + + QL YQLEG+N
Sbjct: 413 ELEEDVDPAKVKEFESLQVLPEIKHVERPASDSWQKLEKSREYKNSN--QLREYQLEGMN 470
Query: 259 WLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFE 318
WL ++W + ILADEMGLGKTIQ+ITFL +F G GPFL+ APLSTI NWEREF
Sbjct: 471 WLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLRG-IHGPFLIIAPLSTITNWEREFR 529
Query: 319 TWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYELITN 378
TW + + Y G + R +++ +++ + D G P S KFHV++T++E+I
Sbjct: 530 TWT-EMNAIVYHGSQISRQMIQQYEMVYRDAQ---GNPL---SGVFKFHVVITTFEMILA 582
Query: 379 DVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXX 438
D L I W+ +++DEAHRLK+ K + L ++++K+LLTGTP
Sbjct: 583 DCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLN 642
Query: 439 XXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVE 498
P +F T+F EF D+ EEQVK+L +L P MLRRLK DV KN+ K E I+ VE
Sbjct: 643 FLEPSQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVE 702
Query: 499 LSPMQKKYYKYILTRNFEALNPKGGGQQ--VSLLNIMMDLKKCCNHPYLFPAAAEE---- 552
L+ +QKKYY+ IL +NF L KG Q +L+N MM+L+KCCNHPYL A E+
Sbjct: 703 LTNIQKKYYRAILEKNFSFLT-KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILED 761
Query: 553 -----APVQGGQYEIQALTRAAG 570
+P +++QA+ +AAG
Sbjct: 762 FRKTHSP-DAPDFQLQAMIQAAG 783
Score = 327 (120.2 bits), Expect = 1.1e-104, Sum P(3) = 1.1e-104
Identities = 94/273 (34%), Positives = 137/273 (50%)
Query: 635 IPGLKESIEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVF 694
I G + + F M + LDILEDYL Y YERIDG + G++RQ +IDRF P + +FVF
Sbjct: 796 IAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVF 855
Query: 695 LLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYD 754
LL TR+GGLGINL ADT II+DSDWNP ND+QA +R HRIGQ +K + + T Y+
Sbjct: 856 LLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ-SKAVKVYRLITRNSYE 914
Query: 755 SDWNPHNDIQAFSRAH-RIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMG 813
+ F +A ++G V+ + + R V Q++K M + L+ + G
Sbjct: 915 REM--------FDKASLKLGLDKAVL--QDINRKGGTNGVQQLSK--MEVEDLLRKGAYG 962
Query: 814 G------KQANFTKQELDDILRFGTXXXXXXXX---XXXXXXXII----KQEAENQDPAY 860
+ + F ++++D IL+ T + + + DP +
Sbjct: 963 ALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISLDDPNF 1022
Query: 861 W---VKLLRHHYEQHQEDVSRTLGKGKRVRKQT 890
W K+ E E S + + RVRKQT
Sbjct: 1023 WQKWAKIAELDTEAKNEKESLVIDR-PRVRKQT 1054
Score = 89 (36.4 bits), Expect = 4.8e-27, Sum P(3) = 4.8e-27
Identities = 22/66 (33%), Positives = 39/66 (59%)
Query: 593 PEWLIANRVI---NSKTLRDGSTI--YLVKWRDLPYDKATWEDENEDIPGLKESIEFYNM 647
P+++ +R++ ++K G + YLVKW LPY+++TWE E ED+ K EF ++
Sbjct: 372 PDYVEVDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELE-EDVDPAKVK-EFESL 429
Query: 648 TKMLDI 653
+ +I
Sbjct: 430 QVLPEI 435
Score = 87 (35.7 bits), Expect = 1.1e-104, Sum P(3) = 1.1e-104
Identities = 19/54 (35%), Positives = 34/54 (62%)
Query: 137 PEWLIANRVI---NSKTLRDGSTI--YLVKWRDLPYDKATWE-DENEDIPGLKE 184
P+++ +R++ ++K G + YLVKW LPY+++TWE +E+ D +KE
Sbjct: 372 PDYVEVDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKE 425
Score = 41 (19.5 bits), Expect = 2.5e-23, Sum P(2) = 2.5e-23
Identities = 18/68 (26%), Positives = 27/68 (39%)
Query: 67 PSQNLDFTSFLEVYHPQLLKSYMKKMNNDFTXXXXXXXXXXXXXKRMARLNRHNINDE-- 124
PSQ T+FLE + + +KK+ + K +A I E
Sbjct: 646 PSQFPSETAFLEEFGDLKTEEQVKKLQS-ILKPMMLRRLKDDVEKNLAPKQETIIEVELT 704
Query: 125 ELEKKYYR 132
++KKYYR
Sbjct: 705 NIQKKYYR 712
Score = 39 (18.8 bits), Expect = 1.2e-99, Sum P(3) = 1.2e-99
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 208 DEDGAS-GSKPRRYTPPPEK-PTTDLRKKYEKQP 239
D++GA+ GSK R P ++ P + K+P
Sbjct: 103 DQEGAAKGSKDREPKPKRKREPKEPKEPRKAKEP 136
>ZFIN|ZDB-GENE-050419-256 [details] [associations]
symbol:chd2 "chromodomain helicase DNA binding
protein 2" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-050419-256
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 EMBL:BX649578 IPI:IPI00999128
Ensembl:ENSDART00000127730 ArrayExpress:E7F7R2 Bgee:E7F7R2
Uniprot:E7F7R2
Length = 1813
Score = 701 (251.8 bits), Expect = 1.2e-104, Sum P(3) = 1.2e-104
Identities = 144/335 (42%), Positives = 206/335 (61%)
Query: 236 EKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEG 295
+KQP ++ D ++L YQL+G+NWL +SW + ILADEMGLGKTIQTI+FL LF +
Sbjct: 476 KKQPSYIGDENLELRDYQLDGVNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYLFHQH 535
Query: 296 HCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGK 355
GPF+V PLST+ +W+REF+TWAPD VV Y+GD R +RD++ W +
Sbjct: 536 QLYGPFIVVVPLSTLTSWQREFDTWAPDMNVVVYLGDVTSRKTIRDYE--WIN------- 586
Query: 356 PCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSI 415
P ++ +KF+ LLT+YE++ D +LG+I WA L VDEAHRLK++ S +K L +
Sbjct: 587 P---QTKRIKFNALLTTYEILLKDKGVLGNINWAFLGVDEAHRLKNDDSLLYKTLIDFRS 643
Query: 416 QNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHM 475
++LL+TGTP +KF F+ E ++ + LH +L P +
Sbjct: 644 NHRLLITGTPLQNSLKELWSLLHFLMSDKFESWEDFEDEHGK-GRDNGYQSLHKVLEPFL 702
Query: 476 LRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMD 535
LRR+K DV K++P+K E I+RV++S QK++YK+ILTRNF+AL+ G LNI+M+
Sbjct: 703 LRRVKKDVEKSLPAKVEQILRVDMSAQQKQFYKWILTRNFKALSKGTRGSSSGFLNIVME 762
Query: 536 LKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAG 570
LKKCCNH +L E+ Q +Q+L R G
Sbjct: 763 LKKCCNHAFLIKQP-EDGENDAPQEHLQSLVRGGG 796
Score = 339 (124.4 bits), Expect = 1.2e-104, Sum P(3) = 1.2e-104
Identities = 65/110 (59%), Positives = 86/110 (78%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M +MLDIL DYL + Y+++R+DG+I G +R++++D FNA G+ F FLLSTR+GGL
Sbjct: 818 FSQMVRMLDILADYLSMKRYQFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGL 877
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYIN---LATADTV 750
GINLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ K +N L T TV
Sbjct: 878 GINLASADTVVIFDSDWNPQNDLQAQARAHRIGQK-KQVNIYRLVTKGTV 926
Score = 251 (93.4 bits), Expect = 2.1e-95, Sum P(3) = 2.1e-95
Identities = 54/102 (52%), Positives = 71/102 (69%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ +V IYR VT+ +VEE + + AK+KM
Sbjct: 879 INLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKM 938
Query: 802 MLTHLVV-------RPGMGGKQAN-----FTKQELDDILRFG 831
+L HLV+ R + AN F K+EL IL+FG
Sbjct: 939 VLDHLVIQRMDTTGRTVLDNSSANSNSNPFNKEELSAILKFG 980
Score = 70 (29.7 bits), Expect = 1.2e-104, Sum P(3) = 1.2e-104
Identities = 12/21 (57%), Positives = 13/21 (61%)
Query: 154 GSTIYLVKWRDLPYDKATWED 174
G YL KW LPY + TWED
Sbjct: 414 GEPEYLCKWMGLPYAECTWED 434
Score = 70 (29.7 bits), Expect = 5.5e-29, Sum P(3) = 5.5e-29
Identities = 12/21 (57%), Positives = 13/21 (61%)
Query: 610 GSTIYLVKWRDLPYDKATWED 630
G YL KW LPY + TWED
Sbjct: 414 GEPEYLCKWMGLPYAECTWED 434
Score = 64 (27.6 bits), Expect = 5.3e-18, Sum P(2) = 5.3e-18
Identities = 16/75 (21%), Positives = 32/75 (42%)
Query: 609 DGSTIYLVKWRDLPYDKATWEDEN----EDIPGLKESIEFYNMTKMLDILEDYLDGEGYK 664
+G T +L+KW+ Y TWE + + + G+K+ F + L+ E +
Sbjct: 311 EGETQFLIKWKGWSYIHNTWESVDSLTQQKVKGMKKLENFKKKNEELNAWLKKASPEDLE 370
Query: 665 YERIDGNITGSMRQE 679
Y +T + ++
Sbjct: 371 YYNCQQELTNDLSKQ 385
Score = 58 (25.5 bits), Expect = 2.1e-103, Sum P(3) = 2.1e-103
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 153 DGSTIYLVKWRDLPYDKATWEDEN----EDIPGLKESIEF 188
+G T +L+KW+ Y TWE + + + G+K+ F
Sbjct: 311 EGETQFLIKWKGWSYIHNTWESVDSLTQQKVKGMKKLENF 350
Score = 49 (22.3 bits), Expect = 3.3e-74, Sum P(3) = 3.3e-74
Identities = 18/81 (22%), Positives = 36/81 (44%)
Query: 696 LSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDS 755
++ + G+ +N A ++I ++ ++ P + + A R NK+ L +D
Sbjct: 1211 INIKISGVQVN---AKSIIQHEEEFEPLHKAVPSNPAER----NKF-QLTCRVKTPHFDV 1262
Query: 756 DWNPHNDIQAFSRAHRIGQQN 776
DW+ H+D Q + G N
Sbjct: 1263 DWDIHDDTQLLLGIYEHGYGN 1283
Score = 40 (19.1 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 720 WNPHNDIQAFSRAHRIGQQNKYINL 744
W H D+ R+ R Q+ +N+
Sbjct: 101 WEEHPDVYGVRRSSRSRQEPARLNI 125
>UNIPROTKB|F1NLW6 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AADN02019534 EMBL:AADN02019532
EMBL:AADN02019533 IPI:IPI00572954 Ensembl:ENSGALT00000002030
ArrayExpress:F1NLW6 Uniprot:F1NLW6
Length = 2005
Score = 700 (251.5 bits), Expect = 2.1e-104, Sum P(3) = 2.1e-104
Identities = 159/383 (41%), Positives = 224/383 (58%)
Query: 204 ELQEDEDGASGSKPRRYTPPPE-----KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGIN 258
EL+ED D + PPE +P ++ +K EK + + QL YQLEG+N
Sbjct: 210 ELEEDVDPVKIKEFEALQIPPEIKHMERPASESWQKLEKSREYKNSN--QLREYQLEGMN 267
Query: 259 WLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFE 318
WL ++W + ILADEMGLGKTIQ+ITFL +F G GPFL+ APLSTI NWEREF
Sbjct: 268 WLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLMG-IHGPFLIIAPLSTITNWEREFR 326
Query: 319 TWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYELITN 378
TW + + Y G + R +++ +++ + DT G P KF V++T++E+I
Sbjct: 327 TWT-EMNAIVYHGSQISRQMIQQYEMVYRDTQ---GNPL---PGIFKFQVVITTFEMILA 379
Query: 379 DVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXX 438
D L I+W +V+DEAHRLK+ K + L ++++K+LLTGTP
Sbjct: 380 DCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLN 439
Query: 439 XXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVE 498
P++F T+F EF D+ EEQVK+L +L P MLRRLK DV KN+ K E I+ VE
Sbjct: 440 FLEPQQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVE 499
Query: 499 LSPMQKKYYKYILTRNFEALNPKGGGQQ--VSLLNIMMDLKKCCNHPYLFPAAAEE---- 552
L+ +QKKYY+ IL +NF L+ KG Q +L+N MM+L+KCCNHPYL A E+
Sbjct: 500 LTNIQKKYYRAILEKNFSFLS-KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILED 558
Query: 553 -----APVQGGQYEIQALTRAAG 570
+P + +++QA+ +AAG
Sbjct: 559 FRKTHSP-EAPDFQLQAMIQAAG 580
Score = 324 (119.1 bits), Expect = 2.1e-104, Sum P(3) = 2.1e-104
Identities = 93/273 (34%), Positives = 137/273 (50%)
Query: 635 IPGLKESIEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVF 694
I G + + F M + LDILEDYL Y YERIDG + G++RQ +IDRF P + +FVF
Sbjct: 593 IAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVF 652
Query: 695 LLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYD 754
LL TR+GGLGINL ADT II+DSDWNP ND+QA +R HRIGQ +K + + T Y+
Sbjct: 653 LLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ-SKAVKVYRLITRNSYE 711
Query: 755 SDWNPHNDIQAFSRAH-RIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMG 813
+ F +A ++G V+ + + R V Q++K M + L+ + G
Sbjct: 712 REM--------FDKASLKLGLDKAVL--QDINRKGGTNGVQQLSK--MEVEDLLRKGAYG 759
Query: 814 G------KQANFTKQELDDILRFGTXXXXXXXX---XXXXXXXII----KQEAENQDPAY 860
+ + F ++++D IL+ T + + + DP +
Sbjct: 760 ALMDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVASGNRTDISLDDPNF 819
Query: 861 W---VKLLRHHYEQHQEDVSRTLGKGKRVRKQT 890
W K+ + E S + + RVRKQT
Sbjct: 820 WQKWAKIAELDTDAKNEKESLVIDR-PRVRKQT 851
Score = 86 (35.3 bits), Expect = 2.1e-104, Sum P(3) = 2.1e-104
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 137 PEWLIANRVINSKTLRD---GSTI--YLVKWRDLPYDKATWEDENEDIPGLK 183
P+++ +R++ +D G + YLVKW LPY+++TWE E ED+ +K
Sbjct: 169 PDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELE-EDVDPVK 219
Score = 86 (35.3 bits), Expect = 4.9e-28, Sum P(2) = 4.9e-28
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 593 PEWLIANRVINSKTLRD---GSTI--YLVKWRDLPYDKATWEDENEDIPGLK 639
P+++ +R++ +D G + YLVKW LPY+++TWE E ED+ +K
Sbjct: 169 PDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELE-EDVDPVK 219
>UNIPROTKB|F1NLV5 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
OMA:CKWATME GeneTree:ENSGT00560000077077 EMBL:AADN02019534
EMBL:AADN02019532 EMBL:AADN02019533 IPI:IPI00588365
Ensembl:ENSGALT00000002034 ArrayExpress:F1NLV5 Uniprot:F1NLV5
Length = 2007
Score = 700 (251.5 bits), Expect = 2.1e-104, Sum P(3) = 2.1e-104
Identities = 159/383 (41%), Positives = 224/383 (58%)
Query: 204 ELQEDEDGASGSKPRRYTPPPE-----KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGIN 258
EL+ED D + PPE +P ++ +K EK + + QL YQLEG+N
Sbjct: 210 ELEEDVDPVKIKEFEALQIPPEIKHMERPASESWQKLEKSREYKNSN--QLREYQLEGMN 267
Query: 259 WLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFE 318
WL ++W + ILADEMGLGKTIQ+ITFL +F G GPFL+ APLSTI NWEREF
Sbjct: 268 WLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLMG-IHGPFLIIAPLSTITNWEREFR 326
Query: 319 TWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYELITN 378
TW + + Y G + R +++ +++ + DT G P KF V++T++E+I
Sbjct: 327 TWT-EMNAIVYHGSQISRQMIQQYEMVYRDTQ---GNPL---PGIFKFQVVITTFEMILA 379
Query: 379 DVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXX 438
D L I+W +V+DEAHRLK+ K + L ++++K+LLTGTP
Sbjct: 380 DCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLN 439
Query: 439 XXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVE 498
P++F T+F EF D+ EEQVK+L +L P MLRRLK DV KN+ K E I+ VE
Sbjct: 440 FLEPQQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVE 499
Query: 499 LSPMQKKYYKYILTRNFEALNPKGGGQQ--VSLLNIMMDLKKCCNHPYLFPAAAEE---- 552
L+ +QKKYY+ IL +NF L+ KG Q +L+N MM+L+KCCNHPYL A E+
Sbjct: 500 LTNIQKKYYRAILEKNFSFLS-KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILED 558
Query: 553 -----APVQGGQYEIQALTRAAG 570
+P + +++QA+ +AAG
Sbjct: 559 FRKTHSP-EAPDFQLQAMIQAAG 580
Score = 324 (119.1 bits), Expect = 2.1e-104, Sum P(3) = 2.1e-104
Identities = 93/273 (34%), Positives = 137/273 (50%)
Query: 635 IPGLKESIEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVF 694
I G + + F M + LDILEDYL Y YERIDG + G++RQ +IDRF P + +FVF
Sbjct: 593 IAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVF 652
Query: 695 LLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYD 754
LL TR+GGLGINL ADT II+DSDWNP ND+QA +R HRIGQ +K + + T Y+
Sbjct: 653 LLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ-SKAVKVYRLITRNSYE 711
Query: 755 SDWNPHNDIQAFSRAH-RIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMG 813
+ F +A ++G V+ + + R V Q++K M + L+ + G
Sbjct: 712 REM--------FDKASLKLGLDKAVL--QDINRKGGTNGVQQLSK--MEVEDLLRKGAYG 759
Query: 814 G------KQANFTKQELDDILRFGTXXXXXXXX---XXXXXXXII----KQEAENQDPAY 860
+ + F ++++D IL+ T + + + DP +
Sbjct: 760 ALMDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVASGNRTDISLDDPNF 819
Query: 861 W---VKLLRHHYEQHQEDVSRTLGKGKRVRKQT 890
W K+ + E S + + RVRKQT
Sbjct: 820 WQKWAKIAELDTDAKNEKESLVIDR-PRVRKQT 851
Score = 86 (35.3 bits), Expect = 2.1e-104, Sum P(3) = 2.1e-104
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 137 PEWLIANRVINSKTLRD---GSTI--YLVKWRDLPYDKATWEDENEDIPGLK 183
P+++ +R++ +D G + YLVKW LPY+++TWE E ED+ +K
Sbjct: 169 PDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELE-EDVDPVK 219
Score = 86 (35.3 bits), Expect = 4.9e-28, Sum P(2) = 4.9e-28
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 593 PEWLIANRVINSKTLRD---GSTI--YLVKWRDLPYDKATWEDENEDIPGLK 639
P+++ +R++ +D G + YLVKW LPY+++TWE E ED+ +K
Sbjct: 169 PDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELE-EDVDPVK 219
>MGI|MGI:2444748 [details] [associations]
symbol:Chd7 "chromodomain helicase DNA binding protein 7"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=ISO] [GO:0001568 "blood vessel development" evidence=IMP]
[GO:0001701 "in utero embryonic development" evidence=ISO;IMP]
[GO:0003007 "heart morphogenesis" evidence=ISO;IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007417 "central
nervous system development" evidence=ISO] [GO:0007512 "adult heart
development" evidence=IMP] [GO:0007605 "sensory perception of
sound" evidence=IMP] [GO:0007626 "locomotory behavior"
evidence=IMP] [GO:0007628 "adult walking behavior" evidence=IMP]
[GO:0008015 "blood circulation" evidence=IMP] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0021545 "cranial nerve
development" evidence=ISO] [GO:0030217 "T cell differentiation"
evidence=ISO] [GO:0030540 "female genitalia development"
evidence=IMP] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IMP] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0042471 "ear morphogenesis"
evidence=IMP] [GO:0042472 "inner ear morphogenesis"
evidence=ISO;IMP] [GO:0043010 "camera-type eye development"
evidence=IMP] [GO:0043584 "nose development" evidence=ISO;IMP]
[GO:0048752 "semicircular canal morphogenesis" evidence=IGI]
[GO:0048806 "genitalia development" evidence=ISO] [GO:0048844
"artery morphogenesis" evidence=IGI] [GO:0050890 "cognition"
evidence=ISO] [GO:0060021 "palate development" evidence=ISO;IMP]
[GO:0060041 "retina development in camera-type eye" evidence=ISO]
[GO:0060123 "regulation of growth hormone secretion" evidence=ISO]
[GO:0060173 "limb development" evidence=ISO] [GO:0060324 "face
development" evidence=ISO] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 MGI:MGI:2444748 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0008015 GO:GO:0003007 GO:GO:0050890 GO:GO:0001701
GO:GO:0040018 GO:GO:0007417 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0043010 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0030540 GO:GO:0007628 GO:GO:0030217
GO:GO:0048752 InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150
CTD:55636 HOGENOM:HOG000246942 KO:K14437 OrthoDB:EOG4MCWZD
OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584 GO:GO:0060123 EMBL:AK042727
EMBL:AK171051 EMBL:AK171857 EMBL:AK172025 EMBL:AL732627
EMBL:AL805903 EMBL:BC034239 IPI:IPI00345676 IPI:IPI00666779
IPI:IPI00849588 RefSeq:NP_001074886.1 UniGene:Mm.138792
ProteinModelPortal:A2AJK6 SMR:A2AJK6 IntAct:A2AJK6 STRING:A2AJK6
PhosphoSite:A2AJK6 PaxDb:A2AJK6 PRIDE:A2AJK6
Ensembl:ENSMUST00000039267 Ensembl:ENSMUST00000051558
Ensembl:ENSMUST00000127476 GeneID:320790 KEGG:mmu:320790
UCSC:uc008rxy.1 UCSC:uc008rya.1 GeneTree:ENSGT00560000077077
InParanoid:A2AJK6 NextBio:397435 Bgee:A2AJK6 CleanEx:MM_CHD7
Genevestigator:A2AJK6 Uniprot:A2AJK6
Length = 2986
Score = 712 (255.7 bits), Expect = 5.6e-104, Sum P(3) = 5.6e-104
Identities = 165/411 (40%), Positives = 237/411 (57%)
Query: 225 EKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQT 284
E+P D KK E + ++ +L YQLEG+NWL ++W + ILADEMGLGKTIQ+
Sbjct: 936 ERPPADDWKKSESSREYKNNN--KLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQS 993
Query: 285 ITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 344
ITFLY ++ +G GPFLV APLSTI NWEREF TW + VV Y G + R ++ +++
Sbjct: 994 ITFLYEIYLKG-IHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEM 1051
Query: 345 SWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQS 404
++D +G R+ + KFH ++T++E+I D L +I W +V+DEAHRLK+
Sbjct: 1052 YFKDP--QG----RVIKGSYKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNC 1105
Query: 405 KFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQV 464
K + L +++K+LLTGTP P +F T+F EF D+ EEQV
Sbjct: 1106 KLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDLKTEEQV 1165
Query: 465 KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGG 524
++L +L P MLRRLK DV KN+ K E I+ VEL+ +QKKYY+ IL +NF L+ KGGG
Sbjct: 1166 QKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLS-KGGG 1224
Query: 525 QQ--VSLLNIMMDLKKCCNHPYLFPAAAEEA--------PVQGGQYEIQALTRAAGXXXX 574
Q +LLN MM+L+KCCNHPYL A E+ + +++QA+ +AAG
Sbjct: 1225 QANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVL 1284
Query: 575 XXXXXXXXXEDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDK 625
GHR LI ++++ + + YL++ R PY++
Sbjct: 1285 IDKLLPKLKAGGHRV------LIFSQMVRCLDILED---YLIQ-RRYPYER 1325
Score = 325 (119.5 bits), Expect = 5.6e-104, Sum P(3) = 5.6e-104
Identities = 78/193 (40%), Positives = 115/193 (59%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M + LDILEDYL Y YERIDG + G++RQ +IDRF+ P + +FVFLL TR+GGL
Sbjct: 1302 FSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL 1361
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDI 763
GINL ADT II+DSDWNP ND+QA +R HRIGQ +K + + T Y+ +
Sbjct: 1362 GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ-SKSVKIYRLITRNSYEREM------ 1414
Query: 764 QAFSRAH-RIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGG-------K 815
F +A ++G +K ++ R + V Q++K+++ ++R G G +
Sbjct: 1415 --FDKASLKLGL-DKAVLQSMSGRENATNGVQQLSKKEI---EDLLRKGAYGALMDEEDE 1468
Query: 816 QANFTKQELDDIL 828
+ F ++++D IL
Sbjct: 1469 GSKFCEEDIDQIL 1481
Score = 214 (80.4 bits), Expect = 2.6e-92, Sum P(3) = 2.6e-92
Identities = 50/115 (43%), Positives = 65/115 (56%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
P +D F R G INL ADT II+DSDWNP ND+QA +R HRIGQ V IY
Sbjct: 1345 PDSDRFVFLLCTRAGGLG--INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIY 1402
Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQAN-----FTKQELDDILRFG 831
R +TRNS E + A K+ L V++ G + A +K+E++D+LR G
Sbjct: 1403 RLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKG 1457
Score = 77 (32.2 bits), Expect = 5.6e-104, Sum P(3) = 5.6e-104
Identities = 20/56 (35%), Positives = 35/56 (62%)
Query: 137 PEWLIANRVIN-SKTLRD-GSTI--YLVKWRDLPYDKATWEDENEDIPGLK-ESIE 187
P+++ +R+++ +++ D G + YLVKW LPY+ +TWE + +DI K E E
Sbjct: 869 PDYVEVDRIMDFARSTDDRGEPVIHYLVKWCSLPYEDSTWELK-QDIDQTKIEEFE 923
Score = 77 (32.2 bits), Expect = 8.7e-27, Sum P(2) = 8.7e-27
Identities = 20/56 (35%), Positives = 35/56 (62%)
Query: 593 PEWLIANRVIN-SKTLRD-GSTI--YLVKWRDLPYDKATWEDENEDIPGLK-ESIE 643
P+++ +R+++ +++ D G + YLVKW LPY+ +TWE + +DI K E E
Sbjct: 869 PDYVEVDRIMDFARSTDDRGEPVIHYLVKWCSLPYEDSTWELK-QDIDQTKIEEFE 923
>RGD|1306794 [details] [associations]
symbol:Chd1 "chromodomain helicase DNA binding protein 1"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1306794 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006338 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 GeneTree:ENSGT00560000076896 OrthoDB:EOG4PG601
IPI:IPI00767719 Ensembl:ENSRNOT00000019358 UCSC:RGD:1306794
Uniprot:D4AAG9
Length = 904
Score = 679 (244.1 bits), Expect = 8.1e-104, Sum P(3) = 8.1e-104
Identities = 147/354 (41%), Positives = 206/354 (58%)
Query: 236 EKQPPFLDD-TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKE 294
+KQP ++ G++L YQL G+NWL +SW + ILADEMGLGKTIQTI+FL LF E
Sbjct: 465 KKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHE 524
Query: 295 GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGG 354
GPFL+ PLST+ +W+RE +TWA V Y+GD + R ++R H+ W
Sbjct: 525 HQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHE--WMH------ 576
Query: 355 KPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYS 414
P ++ +KF++LLT+YE++ D A LG + WA + VDEAHRLK++ S +K L +
Sbjct: 577 -P---QTKRLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFK 632
Query: 415 IQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPH 474
++LL+TGTP PEKF+ F+ E +E LH L P
Sbjct: 633 SNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGK-GREYGYASLHKELEPF 691
Query: 475 MLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMM 534
+LRR+K DV K++P+K E I+R+E+S +QK+YYK+ILTRN++AL+ G LNIMM
Sbjct: 692 LLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMM 751
Query: 535 DLKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
+LKKCCNH YL + Q +Q L R++G E G+R
Sbjct: 752 ELKKCCNHCYLIKPP-DNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNR 804
Score = 312 (114.9 bits), Expect = 8.1e-104, Sum P(3) = 8.1e-104
Identities = 57/97 (58%), Positives = 78/97 (80%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M +MLDIL +YL + ++R+DG+I G +R++++D FNA G+ F FLLSTR+GGL
Sbjct: 808 FSQMVRMLDILAEYLKYRQFPFQRLDGSI-GELRRQALDHFNAXGSEDFCFLLSTRAGGL 866
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
GINLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ +
Sbjct: 867 GINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQ 903
Score = 152 (58.6 bits), Expect = 5.3e-87, Sum P(3) = 5.3e-87
Identities = 27/37 (72%), Positives = 34/37 (91%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKV 778
INLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ +V
Sbjct: 868 INLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 904
Score = 71 (30.1 bits), Expect = 8.1e-104, Sum P(3) = 8.1e-104
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 119 HNINDEELEKKYYRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWED 174
+N E + + +Y I E +IA+ N K+ G Y KW+ LPY + +WED
Sbjct: 372 YNCQQELTDDLHKQYQIV-ERIIAHS--NQKSAA-GLPDYYCKWQGLPYSECSWED 423
Score = 69 (29.3 bits), Expect = 2.7e-27, Sum P(3) = 2.7e-27
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 594 EWLIANRVI---NSKTLRDGSTIYLVKWRDLPYDKATWED 630
++ I R+I N K+ G Y KW+ LPY + +WED
Sbjct: 385 QYQIVERIIAHSNQKSAA-GLPDYYCKWQGLPYSECSWED 423
Score = 58 (25.5 bits), Expect = 1.9e-102, Sum P(3) = 1.9e-102
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 149 KTLRDGSTIYLVKWRDLPYDKATWEDEN----EDIPGLKE 184
K+ G YL+KW+ + TWE E +++ G+K+
Sbjct: 307 KSKEPGDVQYLIKWKGWSHIHNTWETEETLKQQNVRGMKK 346
Score = 58 (25.5 bits), Expect = 7.8e-25, Sum P(2) = 7.8e-25
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 605 KTLRDGSTIYLVKWRDLPYDKATWEDEN----EDIPGLKE 640
K+ G YL+KW+ + TWE E +++ G+K+
Sbjct: 307 KSKEPGDVQYLIKWKGWSHIHNTWETEETLKQQNVRGMKK 346
>RGD|1311921 [details] [associations]
symbol:Chd7 "chromodomain helicase DNA binding protein 7"
species:10116 "Rattus norvegicus" [GO:0001501 "skeletal system
development" evidence=IEA;ISO] [GO:0001568 "blood vessel
development" evidence=ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003007 "heart morphogenesis"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0007417 "central
nervous system development" evidence=IEA;ISO] [GO:0007512 "adult
heart development" evidence=IEA;ISO] [GO:0007605 "sensory
perception of sound" evidence=IEA;ISO] [GO:0007626 "locomotory
behavior" evidence=ISO] [GO:0007628 "adult walking behavior"
evidence=IEA;ISO] [GO:0008015 "blood circulation" evidence=IEA;ISO]
[GO:0021545 "cranial nerve development" evidence=IEA;ISO]
[GO:0030217 "T cell differentiation" evidence=IEA;ISO] [GO:0030540
"female genitalia development" evidence=IEA;ISO] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA;ISO] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IEA;ISO] [GO:0042471 "ear morphogenesis" evidence=ISO]
[GO:0042472 "inner ear morphogenesis" evidence=ISO] [GO:0043010
"camera-type eye development" evidence=ISO] [GO:0043584 "nose
development" evidence=IEA;ISO] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA;ISO] [GO:0048806 "genitalia
development" evidence=ISO] [GO:0048844 "artery morphogenesis"
evidence=IEA;ISO] [GO:0050890 "cognition" evidence=IEA;ISO]
[GO:0060021 "palate development" evidence=IEA;ISO] [GO:0060041
"retina development in camera-type eye" evidence=IEA;ISO]
[GO:0060123 "regulation of growth hormone secretion"
evidence=IEA;ISO] [GO:0060173 "limb development" evidence=ISO]
[GO:0060324 "face development" evidence=IEA;ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 RGD:1311921 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0008015 GO:GO:0003007
GO:GO:0050890 GO:GO:0001701 GO:GO:0040018 GO:GO:0007417
GO:GO:0003682 GO:GO:0001501 GO:GO:0060041 GO:GO:0007605
GO:GO:0007512 GO:GO:0004386 GO:GO:0035116 GO:GO:0060324
GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030540
GO:GO:0007628 GO:GO:0030217 GO:GO:0048752 InterPro:IPR023780
CTD:55636 KO:K14437 OrthoDB:EOG4MCWZD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 IPI:IPI00366595
RefSeq:XP_003749947.1 PRIDE:D3ZAP7 Ensembl:ENSRNOT00000008901
GeneID:312974 KEGG:rno:312974 UCSC:RGD:1311921 Uniprot:D3ZAP7
Length = 2985
Score = 710 (255.0 bits), Expect = 1.5e-103, Sum P(3) = 1.5e-103
Identities = 165/411 (40%), Positives = 236/411 (57%)
Query: 225 EKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQT 284
E+P D KK E + ++ +L YQLEG+NWL ++W + ILADEMGLGKTIQ+
Sbjct: 935 ERPPADDWKKSESSREYKNNN--KLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQS 992
Query: 285 ITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 344
ITFLY ++ +G GPFLV APLSTI NWEREF TW + VV Y G + R ++ +++
Sbjct: 993 ITFLYEIYLKG-IHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEM 1050
Query: 345 SWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQS 404
++D +G R+ + KFH ++T++E+I D L +I W +V+DEAHRLK+
Sbjct: 1051 YFKDP--QG----RVIKGSYKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNC 1104
Query: 405 KFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQV 464
K + L +++K+LLTGTP P +F T+F EF D+ EEQV
Sbjct: 1105 KLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDLKTEEQV 1164
Query: 465 KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGG 524
++L +L P MLRRLK DV KN+ K E I+ VEL+ +QKKYY+ IL +NF L+ KGGG
Sbjct: 1165 QKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLS-KGGG 1223
Query: 525 QQ--VSLLNIMMDLKKCCNHPYLFPAAAEEA--------PVQGGQYEIQALTRAAGXXXX 574
Q +LLN MM+L+KCCNHPYL A E+ +++QA+ +AAG
Sbjct: 1224 QANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKDAHNADSPDFQLQAMIQAAGKLVL 1283
Query: 575 XXXXXXXXXEDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDK 625
GHR LI ++++ + + YL++ R PY++
Sbjct: 1284 IDKLLPKLKAGGHRV------LIFSQMVRCLDILED---YLIQ-RRYPYER 1324
Score = 325 (119.5 bits), Expect = 1.5e-103, Sum P(3) = 1.5e-103
Identities = 78/193 (40%), Positives = 115/193 (59%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M + LDILEDYL Y YERIDG + G++RQ +IDRF+ P + +FVFLL TR+GGL
Sbjct: 1301 FSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL 1360
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDI 763
GINL ADT II+DSDWNP ND+QA +R HRIGQ +K + + T Y+ +
Sbjct: 1361 GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ-SKSVKIYRLITRNSYEREM------ 1413
Query: 764 QAFSRAH-RIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGG-------K 815
F +A ++G +K ++ R + V Q++K+++ ++R G G +
Sbjct: 1414 --FDKASLKLGL-DKAVLQSMSGRENATNGVQQLSKKEI---EDLLRKGAYGALMDEEDE 1467
Query: 816 QANFTKQELDDIL 828
+ F ++++D IL
Sbjct: 1468 GSKFCEEDIDQIL 1480
Score = 214 (80.4 bits), Expect = 6.8e-92, Sum P(3) = 6.8e-92
Identities = 50/115 (43%), Positives = 65/115 (56%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
P +D F R G INL ADT II+DSDWNP ND+QA +R HRIGQ V IY
Sbjct: 1344 PDSDRFVFLLCTRAGGLG--INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIY 1401
Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQAN-----FTKQELDDILRFG 831
R +TRNS E + A K+ L V++ G + A +K+E++D+LR G
Sbjct: 1402 RLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKG 1456
Score = 75 (31.5 bits), Expect = 1.5e-103, Sum P(3) = 1.5e-103
Identities = 15/41 (36%), Positives = 28/41 (68%)
Query: 137 PEWLIANRVIN-SKTLRD-GSTI--YLVKWRDLPYDKATWE 173
P+++ +R+++ +++ D G + YLVKW LPY+ +TWE
Sbjct: 868 PDYVEVDRIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWE 908
Score = 75 (31.5 bits), Expect = 3.9e-25, Sum P(3) = 3.9e-25
Identities = 15/41 (36%), Positives = 28/41 (68%)
Query: 593 PEWLIANRVIN-SKTLRD-GSTI--YLVKWRDLPYDKATWE 629
P+++ +R+++ +++ D G + YLVKW LPY+ +TWE
Sbjct: 868 PDYVEVDRIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWE 908
Score = 38 (18.4 bits), Expect = 1.1e-99, Sum P(3) = 1.1e-99
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 204 ELQEDE-DGASGSKPRRYTPPPEKPTTDLRKKYEKQPP 240
EL + D + +R P +K +L++ EK+ P
Sbjct: 620 ELSRNSLDASQEETKKRKRPKVKKDPKELKEPREKKEP 657
>TAIR|locus:2041644 [details] [associations]
symbol:CHR5 "chromatin remodeling 5" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0009506 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR025260 Pfam:PF13907 KO:K11367
IPI:IPI00521189 RefSeq:NP_178970.3 UniGene:At.40665 PRIDE:F4IV99
EnsemblPlants:AT2G13370.1 GeneID:815823 KEGG:ath:AT2G13370
OMA:ARNTKSY Uniprot:F4IV99
Length = 1724
Score = 666 (239.5 bits), Expect = 2.3e-103, Sum P(3) = 2.3e-103
Identities = 140/319 (43%), Positives = 199/319 (62%)
Query: 233 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 292
+K ++QP +L G L YQLEG+N+L SW + + ILADEMGLGKT+Q+++ L L
Sbjct: 611 RKLDEQPEWL--IGGTLRDYQLEGLNFLVNSWLNDTNVILADEMGLGKTVQSVSMLGFLQ 668
Query: 293 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANR 352
GPFLV PLST+ NW +EF W P ++ YVG + R V + ++ E +
Sbjct: 669 NTQQIPGPFLVVVPLSTLANWAKEFRKWLPGMNIIVYVGTRASREVCQQYEFYNE---KK 725
Query: 353 GGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSG 412
G+P +KF+ LLT+YE++ D A+L I+W L+VDEAHRLK+++++ + L
Sbjct: 726 VGRP-------IKFNALLTTYEVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLE 778
Query: 413 YSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISK--EEQVKRLHDL 470
+S +NKLL+TGTP P KF + F + ++S E ++ LH
Sbjct: 779 FSTKNKLLITGTPLQNSVEELWALLHFLDPGKFKNKDEFVENYKNLSSFNESELANLHLE 838
Query: 471 LGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLL 530
L PH+LRR+ DV K++P K E I+RVE+SP+QK+YYK+IL RNF LN G QVSLL
Sbjct: 839 LRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLL 898
Query: 531 NIMMDLKKCCNHPYLFPAA 549
NI+++LKKCCNHP+LF +A
Sbjct: 899 NIVVELKKCCNHPFLFESA 917
Score = 340 (124.7 bits), Expect = 2.3e-103, Sum P(3) = 2.3e-103
Identities = 61/101 (60%), Positives = 81/101 (80%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M +MLDIL +YL G++++R+DG+ +RQ+++D FNAP + F FLLSTR+GGL
Sbjct: 961 FSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQAMDHFNAPASDDFCFLLSTRAGGL 1020
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINL 744
GINLATADTV+I+DSDWNP ND+QA SRAHRIGQQ + +N+
Sbjct: 1021 GINLATADTVVIFDSDWNPQNDLQAMSRAHRIGQQ-EVVNI 1060
Score = 282 (104.3 bits), Expect = 2.9e-97, Sum P(3) = 2.9e-97
Identities = 66/119 (55%), Positives = 77/119 (64%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
P +D F + R G INLATADTV+I+DSDWNP ND+QA SRAHRIGQQ V IY
Sbjct: 1004 PASDDFCFLLSTRAGGLG--INLATADTVVIFDSDWNPQNDLQAMSRAHRIGQQEVVNIY 1061
Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRP-GMGG--------KQANFTKQELDDILRFG 831
RFVT SVEE + + AKRKM+L HLV++ G K +NF K EL ILRFG
Sbjct: 1062 RFVTSKSVEEEILERAKRKMVLDHLVIQKLNAEGRLEKRETKKGSNFDKNELSAILRFG 1120
Score = 91 (37.1 bits), Expect = 2.3e-103, Sum P(3) = 2.3e-103
Identities = 29/95 (30%), Positives = 46/95 (48%)
Query: 121 IND--EELEKKYYRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENED 178
+ND +E++ + + E +IA+R I+ L D YLVKW+ L Y +ATWE ++ D
Sbjct: 517 VNDVSKEMDLDIIKQNSQVERIIADR-ISKDGLGDVVPEYLVKWQGLSYAEATWE-KDVD 574
Query: 179 IPGLKESIEFYNXXXXXXXXXXXXXELQEDEDGAS 213
I + +I+ Y E Q + AS
Sbjct: 575 IAFAQVAIDEYKAREVSIAVQGKMVEQQRTKGKAS 609
Score = 81 (33.6 bits), Expect = 2.0e-29, Sum P(2) = 2.0e-29
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 594 EWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFY 645
E +IA+R I+ L D YLVKW+ L Y +ATWE ++ DI + +I+ Y
Sbjct: 536 ERIIADR-ISKDGLGDVVPEYLVKWQGLSYAEATWE-KDVDIAFAQVAIDEY 585
Score = 38 (18.4 bits), Expect = 2.8e-29, Sum P(3) = 2.8e-29
Identities = 12/45 (26%), Positives = 21/45 (46%)
Query: 607 LRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKML 651
L+D + + +KW L D+A +N + +EF K+L
Sbjct: 743 LKDKAVLSKIKWIYLMVDEAH-RLKNSEAQLYTALLEFSTKNKLL 786
>UNIPROTKB|B6ZLK2 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0000775 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 EMBL:AB465210 IPI:IPI00573130 UniGene:Gga.4301
UniGene:Gga.8463 STRING:B6ZLK2 HOVERGEN:HBG005325
InterPro:IPR025260 Pfam:PF13907 Uniprot:B6ZLK2
Length = 1719
Score = 678 (243.7 bits), Expect = 1.2e-102, Sum P(4) = 1.2e-102
Identities = 146/354 (41%), Positives = 206/354 (58%)
Query: 236 EKQPPFLDD-TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKE 294
+KQP ++ ++L YQL G+NWL +SW + ILADEMGLGKTIQTI+FL LF E
Sbjct: 463 KKQPSYIGGHESLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHE 522
Query: 295 GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGG 354
GPFL+ PLST+ +W+RE +TWAP V Y+GD R ++R H+ W
Sbjct: 523 HQLYGPFLLVVPLSTLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHE--WMH------ 574
Query: 355 KPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYS 414
P ++ +KF++LLT+YE++ D + LG + WA + VDEAHRLK++ S +K L +
Sbjct: 575 -P---QTKRLKFNILLTTYEILLKDKSFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFK 630
Query: 415 IQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPH 474
++LL+TGTP PEKF+ F+ E +E LH L P
Sbjct: 631 SNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGK-GREYGYASLHKELEPF 689
Query: 475 MLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMM 534
+LRR+K DV K++P+K E I+R+E+S +QK+YYK+ILTRN++AL+ G LNIMM
Sbjct: 690 LLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMM 749
Query: 535 DLKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
+LKKCCNH YL ++ Q +Q L R++G E G+R
Sbjct: 750 ELKKCCNHCYLIKPP-DDNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNR 802
Score = 326 (119.8 bits), Expect = 1.2e-102, Sum P(4) = 1.2e-102
Identities = 59/101 (58%), Positives = 81/101 (80%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M +MLDIL +YL + ++R+DG+I G +R++++D FNA G+ F FLLSTR+GGL
Sbjct: 806 FSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGL 865
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINL 744
GINLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ K +N+
Sbjct: 866 GINLASADTVVIFDSDWNPQNDLQAQARAHRIGQK-KQVNI 905
Score = 250 (93.1 bits), Expect = 1.1e-94, Sum P(4) = 1.1e-94
Identities = 55/102 (53%), Positives = 70/102 (68%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ +V IYR VT+ SVEE + + AK+KM
Sbjct: 867 INLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKM 926
Query: 802 MLTHLVV-RPGMGGK-----------QANFTKQELDDILRFG 831
+L HLV+ R GK F K+EL IL+FG
Sbjct: 927 VLDHLVIQRMDTTGKTVLHTGSTPSSSTPFNKEELSAILKFG 968
Score = 71 (30.1 bits), Expect = 1.2e-102, Sum P(4) = 1.2e-102
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 119 HNINDEELEKKYYRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWED 174
+N E + + +Y I E +IA+ N K+ G Y KW+ LPY + +WED
Sbjct: 370 YNCQQELTDDLHKQYQIV-ERIIAHS--NQKSAA-GYPDYYCKWQGLPYSECSWED 421
Score = 69 (29.3 bits), Expect = 1.4e-26, Sum P(4) = 1.4e-26
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 594 EWLIANRVI---NSKTLRDGSTIYLVKWRDLPYDKATWED 630
++ I R+I N K+ G Y KW+ LPY + +WED
Sbjct: 383 QYQIVERIIAHSNQKSAA-GYPDYYCKWQGLPYSECSWED 421
Score = 56 (24.8 bits), Expect = 4.3e-101, Sum P(4) = 4.3e-101
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 148 SKTLRDGSTIYLVKWRDLPYDKATWEDEN----EDIPGLKE 184
SK L G YL+KW+ + TWE E +++ G+K+
Sbjct: 306 SKEL--GEIQYLIKWKGWSHIHNTWETEETLKQQNVKGMKK 344
Score = 56 (24.8 bits), Expect = 3.8e-24, Sum P(3) = 3.8e-24
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 604 SKTLRDGSTIYLVKWRDLPYDKATWEDEN----EDIPGLKE 640
SK L G YL+KW+ + TWE E +++ G+K+
Sbjct: 306 SKEL--GEIQYLIKWKGWSHIHNTWETEETLKQQNVKGMKK 344
Score = 38 (18.4 bits), Expect = 1.2e-102, Sum P(4) = 1.2e-102
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 867 HHYEQHQEDVSRTLGKGKR 885
HH ++HQ D + KR
Sbjct: 1559 HHKDRHQGDAYKKSDSRKR 1577
>RGD|1594200 [details] [associations]
symbol:LOC680231 "similar to chromodomain helicase DNA binding
protein 9" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 RGD:1594200 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 OrthoDB:EOG4548XQ IPI:IPI00957597
Ensembl:ENSRNOT00000018201 Uniprot:D3ZVE2
Length = 2881
Score = 684 (245.8 bits), Expect = 1.2e-102, Sum P(3) = 1.2e-102
Identities = 154/377 (40%), Positives = 220/377 (58%)
Query: 184 ESIEFYNXXXXXXXXXXXXXELQEDEDGASGSK------PRRYTPPPEKPTTDLRKKYEK 237
ES+ +Y EL+ED D A + R T ++P +++ KK ++
Sbjct: 790 ESVVYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQLQASRPDTRQLDRPPSNIWKKIDQ 849
Query: 238 QPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHC 297
+ + G QL YQLEG+NWL ++W + ILADEMGLGKTIQ+ITFLY + G
Sbjct: 850 SREYKN--GNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEVLLTG-I 906
Query: 298 KGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPC 357
+GPFL+ APLSTI NWEREF TW D VV Y G R +++ +++ + D+ +G
Sbjct: 907 RGPFLIIAPLSTIANWEREFRTWT-DINVVVYHGSLISRQMIQQYEMYFRDS--QG---- 959
Query: 358 RIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQN 417
RI +F ++T++E+I L +IEW +++DEAHRLK+ K + L ++++
Sbjct: 960 RIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEH 1019
Query: 418 KLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLR 477
K+LLTGTP P +F ++F EF D+ EEQV++L +L P MLR
Sbjct: 1020 KVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLR 1079
Query: 478 RLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQ--VSLLNIMMD 535
RLK DV K + K E I+ VEL+ +QKKYY+ IL +NF L+ KG GQ +L+N MM+
Sbjct: 1080 RLKEDVEKRLAPKEETIIEVELTNIQKKYYRAILEKNFSFLS-KGAGQTNVPNLVNTMME 1138
Query: 536 LKKCCNHPYLFPAAAEE 552
L+KCCNHPYL A E+
Sbjct: 1139 LRKCCNHPYLIKGAEEK 1155
Score = 334 (122.6 bits), Expect = 1.2e-102, Sum P(3) = 1.2e-102
Identities = 80/192 (41%), Positives = 116/192 (60%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M + LDILEDYL + Y YERIDG + G++RQ +IDRF+ P + +FVFLL TR+GGL
Sbjct: 1203 FSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL 1262
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDI 763
GINL ADT II+DSDWNP ND+QA +R HRIGQ NK + + T Y+ +
Sbjct: 1263 GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ-NKAVKVYRLVTRNSYEREM------ 1315
Query: 764 QAFSRAH-RIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGG------KQ 816
F RA ++G +K ++ R+S + Q++K++ + L+ R G +
Sbjct: 1316 --FDRASLKLGL-DKAVLQSMSGRDSNVSGIQQLSKKE--IEDLLRRGAYGAIMEEEDEG 1370
Query: 817 ANFTKQELDDIL 828
+ F ++++D IL
Sbjct: 1371 SKFCEEDIDQIL 1382
Score = 217 (81.4 bits), Expect = 2.3e-90, Sum P(3) = 2.3e-90
Identities = 51/116 (43%), Positives = 67/116 (57%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
P +D F R G INL ADT II+DSDWNP ND+QA +R HRIGQ V +Y
Sbjct: 1246 PDSDRFVFLLCTRAGGLG--INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVY 1303
Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQAN------FTKQELDDILRFG 831
R VTRNS E + A K+ L V++ M G+ +N +K+E++D+LR G
Sbjct: 1304 RLVTRNSYEREMFDRASLKLGLDKAVLQ-SMSGRDSNVSGIQQLSKKEIEDLLRRG 1358
Score = 83 (34.3 bits), Expect = 1.2e-102, Sum P(3) = 1.2e-102
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 137 PEWLIANRVINSKTLRD---GSTI--YLVKWRDLPYDKATWE-DENEDIPGLKE 184
P+++ +R++ D G ++ YLVKW LPY+ +TWE E+ D+ ++E
Sbjct: 769 PDYVEVDRILEVSFCEDKDTGESVVYYLVKWCSLPYEDSTWELKEDVDLAKIEE 822
Score = 83 (34.3 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 593 PEWLIANRVINSKTLRD---GSTI--YLVKWRDLPYDKATWE-DENEDIPGLKE 640
P+++ +R++ D G ++ YLVKW LPY+ +TWE E+ D+ ++E
Sbjct: 769 PDYVEVDRILEVSFCEDKDTGESVVYYLVKWCSLPYEDSTWELKEDVDLAKIEE 822
Score = 40 (19.1 bits), Expect = 8.7e-72, Sum P(3) = 8.7e-72
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 584 EDGHRYGIKPEW 595
++ YG+ PEW
Sbjct: 2579 KENSEYGVAPEW 2590
>CGD|CAL0001390 [details] [associations]
symbol:orf19.3035 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0031934 "mating-type region
heterochromatin" evidence=IEA] [GO:0046695 "SLIK (SAGA-like)
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0030874 "nucleolar chromatin" evidence=IEA] [GO:2000616
"negative regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IEA] [GO:0071441 "negative regulation of histone H3-K14
acetylation" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=IEA] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IEA] [GO:0060303 "regulation
of nucleosome density" evidence=IEA] [GO:0006200 "ATP catabolic
process" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:2000104 "negative regulation of
DNA-dependent DNA replication" evidence=IEA] [GO:0042766
"nucleosome mobilization" evidence=IEA] [GO:0001178 "regulation of
transcriptional start site selection at RNA polymerase II promoter"
evidence=IEA] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IEA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IEA] [GO:0000182 "rDNA
binding" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 CGD:CAL0001390
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 EMBL:AACQ01000017
EMBL:AACQ01000015 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907 KO:K11367
RefSeq:XP_721262.1 RefSeq:XP_721533.1 ProteinModelPortal:Q5AI17
STRING:Q5AI17 GeneID:3636889 GeneID:3637077 KEGG:cal:CaO19.10553
KEGG:cal:CaO19.3035 Uniprot:Q5AI17
Length = 1410
Score = 667 (239.9 bits), Expect = 1.3e-102, Sum P(3) = 1.3e-102
Identities = 146/360 (40%), Positives = 207/360 (57%)
Query: 233 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 292
+K KQP F+ + G +L +QL G+NW+ + W +N + ILADEMGLGKT+QT+ FL L
Sbjct: 348 EKLFKQPVFIKN-G-ELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQTVAFLSWLI 405
Query: 293 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANR 352
GP LV PLST+ W+ FE WAPD V Y+G+ + R +R++++ N+
Sbjct: 406 YARRQNGPHLVVVPLSTVPAWQETFEKWAPDVNCVYYLGNGEARKTIREYELY-----NQ 460
Query: 353 GGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSG 412
KP KF+VLLT+YE I D LG+ +W L VDEAHRLK+ +S ++ L G
Sbjct: 461 NRKP--------KFNVLLTTYEYILKDKNELGAFKWQFLAVDEAHRLKNAESSLYEALKG 512
Query: 413 YSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLG 472
+ + N+LL+TGTP P KF E D +E+ +K L +
Sbjct: 513 FKVSNRLLITGTPLQNNVKELAALCNFLMPGKFTIDQEIDFETIDSEQEQYIKDLQKKIS 572
Query: 473 PHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNI 532
P +LRRLK DV K++PSKSE I+RVELS +Q +YYK I+T+N+ ALN G Q+SLLNI
Sbjct: 573 PFILRRLKKDVEKSLPSKSERILRVELSDIQTEYYKNIITKNYAALNAGNRGSQISLLNI 632
Query: 533 MMDLKKCCNHPYLFPAAAEEAPVQGG----QYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
M +LKK NHPYLF A ++ + G + ++ + ++G ++GHR
Sbjct: 633 MSELKKASNHPYLFDGAEDKVLDKAGSPSRENTLKGIVMSSGKMVLLEQLLSRLRKEGHR 692
Score = 335 (123.0 bits), Expect = 1.3e-102, Sum P(3) = 1.3e-102
Identities = 64/109 (58%), Positives = 81/109 (74%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M +MLDIL DY+ +GY+++R+DG + S R+ +ID FNAPG+ F FLLSTR+GGL
Sbjct: 696 FSQMVRMLDILGDYMFIKGYQFQRLDGTVPSSKRKIAIDHFNAPGSKDFAFLLSTRAGGL 755
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV 750
GINL TADTVII+DSDWNP D+QA +RAHRIGQ+N + DTV
Sbjct: 756 GINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVSVYRFVSKDTV 804
Score = 243 (90.6 bits), Expect = 6.0e-93, Sum P(3) = 6.0e-93
Identities = 47/96 (48%), Positives = 69/96 (71%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INL TADTVII+DSDWNP D+QA +RAHRIGQ+N V +YRFV++++VEE++ + A++KM
Sbjct: 757 INLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVSVYRFVSKDTVEEQILERARKKM 816
Query: 802 MLTHLVVRPGM------GGKQANFTKQELDDILRFG 831
+L + ++ G+ G + + EL IL+FG
Sbjct: 817 VLEYAIISLGITDPSAKNGSKTEPSTNELSQILKFG 852
Score = 91 (37.1 bits), Expect = 2.1e-21, Sum P(3) = 2.1e-21
Identities = 32/118 (27%), Positives = 52/118 (44%)
Query: 594 EWLIANRVINSKTLR--DGSTI--YLVKWRDLPYDKATWEDENEDIPGLKESIEFYNM-- 647
E+ R+++S+ + DG T Y VKW+ L YD+ +WED E E + Y
Sbjct: 268 EYTHVERIVDSERVETDDGETKLQYFVKWKRLYYDECSWEDAEEIAKIAPEQVTKYQQRL 327
Query: 648 -TKMLDILE-DYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
+K+L L +Y + ++E++ E D F G + FL S G+
Sbjct: 328 NSKILPSLSANYPLSQRPRFEKLFKQPVFIKNGELRD-FQLTGLNWMAFLWSRNENGI 384
Score = 82 (33.9 bits), Expect = 1.3e-102, Sum P(3) = 1.3e-102
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 118 RHNINDEELEKKYYRYGIKPEWLIANRVINSKTLR--DGSTI--YLVKWRDLPYDKATWE 173
+ ++ ++E++ R + E+ R+++S+ + DG T Y VKW+ L YD+ +WE
Sbjct: 249 KEDLEAMDIERERKR-DEQDEYTHVERIVDSERVETDDGETKLQYFVKWKRLYYDECSWE 307
Query: 174 DENE 177
D E
Sbjct: 308 DAEE 311
Score = 60 (26.2 bits), Expect = 2.6e-100, Sum P(3) = 2.6e-100
Identities = 20/71 (28%), Positives = 33/71 (46%)
Query: 123 DEELEKKYYRYGIKPEW-----LIANRVINSKTLR---DGSTIYL--VKWRDLPYDKATW 172
DEE + YY+ I+PE ++ + +N + D YL +KW D + TW
Sbjct: 153 DEEGDYYYYQQAIEPENERGIDIVMDHKLNEENAEKTGDPKIDYLFKIKWTDASHLHNTW 212
Query: 173 EDENEDIPGLK 183
E + +D+ K
Sbjct: 213 E-KYQDLKSFK 222
Score = 54 (24.1 bits), Expect = 2.7e-26, Sum P(2) = 2.7e-26
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 603 NSKTLRDGSTIYL--VKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILED 656
N++ D YL +KW D + TWE + +D+ K + N K I +D
Sbjct: 185 NAEKTGDPKIDYLFKIKWTDASHLHNTWE-KYQDLKSFKGFRKLDNYIKQFIIYDD 239
>MGI|MGI:1924001 [details] [associations]
symbol:Chd9 "chromodomain helicase DNA binding protein 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00592
MGI:MGI:1924001 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150
HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077 CTD:80205
KO:K14438 OMA:MWGHQTA EMBL:DQ127229 EMBL:AK034446 EMBL:AK039562
EMBL:AK084000 EMBL:AB093226 EMBL:BC052896 IPI:IPI00229650
IPI:IPI00758139 RefSeq:NP_796198.1 UniGene:Mm.100615
ProteinModelPortal:Q8BYH8 SMR:Q8BYH8 STRING:Q8BYH8
PhosphoSite:Q8BYH8 PaxDb:Q8BYH8 PRIDE:Q8BYH8
Ensembl:ENSMUST00000048665 Ensembl:ENSMUST00000109614 GeneID:109151
KEGG:mmu:109151 UCSC:uc009msf.2 UCSC:uc009msi.2 InParanoid:Q8BYH8
OrthoDB:EOG4548XQ ChiTaRS:CHD9 NextBio:361700 Bgee:Q8BYH8
CleanEx:MM_CHD9 Genevestigator:Q8BYH8 Uniprot:Q8BYH8
Length = 2885
Score = 683 (245.5 bits), Expect = 1.5e-102, Sum P(3) = 1.5e-102
Identities = 154/377 (40%), Positives = 220/377 (58%)
Query: 184 ESIEFYNXXXXXXXXXXXXXELQEDEDGASGSK------PRRYTPPPEKPTTDLRKKYEK 237
ES+ +Y EL+ED D A + R T ++P +++ KK E+
Sbjct: 790 ESVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQLQASRPDTRHLDRPPSNIWKKIEQ 849
Query: 238 QPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHC 297
+ + G QL YQLEG+NWL ++W + ILADEMGLGKTIQ+ITFLY + G
Sbjct: 850 SREYKN--GNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILLTG-I 906
Query: 298 KGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPC 357
+GPFL+ APLSTI NWEREF TW D VV Y G R +++ +++ + D+ +G
Sbjct: 907 RGPFLIIAPLSTIANWEREFRTWT-DINVVVYHGSLISRQMIQQYEMYFRDS--QG---- 959
Query: 358 RIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQN 417
RI +F ++T++E+I L +I+W +++DEAHRLK+ K + L ++++
Sbjct: 960 RIIRGAYRFQAIITTFEMILGGCGELNAIDWRCVIIDEAHRLKNKNCKLLEGLKLMNLEH 1019
Query: 418 KLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLR 477
K+LLTGTP P +F ++F EF D+ EEQV++L +L P MLR
Sbjct: 1020 KVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLR 1079
Query: 478 RLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQ--VSLLNIMMD 535
RLK DV K + K E I+ VEL+ +QKKYY+ IL +NF L+ KG GQ +L+N MM+
Sbjct: 1080 RLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLS-KGAGQTNVPNLVNTMME 1138
Query: 536 LKKCCNHPYLFPAAAEE 552
L+KCCNHPYL A E+
Sbjct: 1139 LRKCCNHPYLIKGAEEK 1155
Score = 334 (122.6 bits), Expect = 1.5e-102, Sum P(3) = 1.5e-102
Identities = 80/192 (41%), Positives = 116/192 (60%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M + LDILEDYL + Y YERIDG + G++RQ +IDRF+ P + +FVFLL TR+GGL
Sbjct: 1203 FSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL 1262
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDI 763
GINL ADT II+DSDWNP ND+QA +R HRIGQ NK + + T Y+ +
Sbjct: 1263 GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ-NKAVKVYRLVTRNSYEREM------ 1315
Query: 764 QAFSRAH-RIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGG------KQ 816
F RA ++G +K ++ R+S + Q++K++ + L+ R G +
Sbjct: 1316 --FDRASLKLGL-DKAVLQSMSGRDSNVSGIQQLSKKE--IEDLLRRGAYGAIMEEEDEG 1370
Query: 817 ANFTKQELDDIL 828
+ F ++++D IL
Sbjct: 1371 SKFCEEDIDQIL 1382
Score = 217 (81.4 bits), Expect = 3.0e-90, Sum P(3) = 3.0e-90
Identities = 51/116 (43%), Positives = 67/116 (57%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
P +D F R G INL ADT II+DSDWNP ND+QA +R HRIGQ V +Y
Sbjct: 1246 PDSDRFVFLLCTRAGGLG--INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVY 1303
Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQAN------FTKQELDDILRFG 831
R VTRNS E + A K+ L V++ M G+ +N +K+E++D+LR G
Sbjct: 1304 RLVTRNSYEREMFDRASLKLGLDKAVLQ-SMSGRDSNVSGIQQLSKKEIEDLLRRG 1358
Score = 83 (34.3 bits), Expect = 1.5e-102, Sum P(3) = 1.5e-102
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 137 PEWLIANRVINSKTLRD---GSTI--YLVKWRDLPYDKATWE-DENEDIPGLKE 184
P+++ +R++ D G ++ YLVKW LPY+ +TWE E+ D+ ++E
Sbjct: 769 PDYVEVDRILEVSFCEDKDTGESVIYYLVKWCSLPYEDSTWELKEDVDLAKIEE 822
Score = 83 (34.3 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 593 PEWLIANRVINSKTLRD---GSTI--YLVKWRDLPYDKATWE-DENEDIPGLKE 640
P+++ +R++ D G ++ YLVKW LPY+ +TWE E+ D+ ++E
Sbjct: 769 PDYVEVDRILEVSFCEDKDTGESVIYYLVKWCSLPYEDSTWELKEDVDLAKIEE 822
Score = 40 (19.1 bits), Expect = 1.1e-71, Sum P(3) = 1.1e-71
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 584 EDGHRYGIKPEW 595
++ YG+ PEW
Sbjct: 2578 KENSEYGVAPEW 2589
>UNIPROTKB|Q3L8U1 [details] [associations]
symbol:CHD9 "Chromodomain-helicase-DNA-binding protein 9"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0044255 "cellular lipid metabolic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_111217 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005654 GO:GO:0006355 GO:GO:0044281
GO:GO:0003677 GO:GO:0044255 GO:GO:0006351 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOVERGEN:HBG081150 EMBL:AY243500 EMBL:DQ333316
EMBL:AY647157 EMBL:AC007906 EMBL:AC079416 EMBL:BC140815
EMBL:AB002306 EMBL:AF150735 EMBL:AK022582 IPI:IPI00383105
IPI:IPI00746795 IPI:IPI00914955 RefSeq:NP_079410.4 UniGene:Hs.59159
UniGene:Hs.622347 ProteinModelPortal:Q3L8U1 SMR:Q3L8U1
IntAct:Q3L8U1 STRING:Q3L8U1 PhosphoSite:Q3L8U1 DMDM:215273951
PaxDb:Q3L8U1 PRIDE:Q3L8U1 Ensembl:ENST00000398510
Ensembl:ENST00000447540 Ensembl:ENST00000564845
Ensembl:ENST00000566029 GeneID:80205 KEGG:hsa:80205 UCSC:uc002egy.3
UCSC:uc002ehb.3 UCSC:uc002ehc.3 CTD:80205 GeneCards:GC16P053041
HGNC:HGNC:25701 neXtProt:NX_Q3L8U1 PharmGKB:PA128394727
InParanoid:Q3L8U1 KO:K14438 OMA:MWGHQTA GenomeRNAi:80205
NextBio:70576 ArrayExpress:Q3L8U1 Bgee:Q3L8U1 CleanEx:HS_CHD9
Genevestigator:Q3L8U1 GermOnline:ENSG00000177200 Uniprot:Q3L8U1
Length = 2897
Score = 682 (245.1 bits), Expect = 4.1e-102, Sum P(3) = 4.1e-102
Identities = 147/348 (42%), Positives = 212/348 (60%)
Query: 207 EDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQ 266
E+ + S+P T ++P +++ KK ++ + + G QL YQLEG+NWL ++W
Sbjct: 822 EEFEQLQASRPD--TRRLDRPPSNIWKKIDQSRDYKN--GNQLREYQLEGLNWLLFNWYN 877
Query: 267 NIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYV 326
+ ILADEMGLGKTIQ+ITFLY + G +GPFL+ APLSTI NWEREF TW D V
Sbjct: 878 RRNCILADEMGLGKTIQSITFLYEILLTG-IRGPFLIIAPLSTIANWEREFRTWT-DINV 935
Query: 327 VTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSI 386
V Y G R +++ +++ + D+ +G RI +F ++T++E+I L +I
Sbjct: 936 VVYHGSLISRQMIQQYEMYFRDS--QG----RIIRGAYRFQAIITTFEMILGGCGELNAI 989
Query: 387 EWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFN 446
EW +++DEAHRLK+ K + L ++++K+LLTGTP P +F
Sbjct: 990 EWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFP 1049
Query: 447 DLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKY 506
++F EF D+ EEQV++L +L P MLRRLK DV K + K E I+ VEL+ +QKKY
Sbjct: 1050 SESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKY 1109
Query: 507 YKYILTRNFEALNPKGGGQQ--VSLLNIMMDLKKCCNHPYLFPAAAEE 552
Y+ IL +NF L+ KG GQ +L+N MM+L+KCCNHPYL A E+
Sbjct: 1110 YRAILEKNFSFLS-KGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEK 1156
Score = 331 (121.6 bits), Expect = 4.1e-102, Sum P(3) = 4.1e-102
Identities = 80/192 (41%), Positives = 115/192 (59%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M + LDILEDYL + Y YERIDG + G++RQ +IDRF+ P + +FVFLL TR+GGL
Sbjct: 1204 FSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL 1263
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDI 763
GINL ADT II+DSDWNP ND+QA +R HRIGQ NK + + T Y+ +
Sbjct: 1264 GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ-NKAVKVYRLVTRNSYEREM------ 1316
Query: 764 QAFSRAH-RIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGG------KQ 816
F RA ++G +K ++ R S + Q++K++ + L+ R G +
Sbjct: 1317 --FDRASLKLGL-DKAVLQSMSGRESNVGGIQQLSKKE--IEDLLRRGAYGAIMEEEDEG 1371
Query: 817 ANFTKQELDDIL 828
+ F ++++D IL
Sbjct: 1372 SKFCEEDIDQIL 1383
Score = 219 (82.2 bits), Expect = 2.4e-90, Sum P(3) = 2.4e-90
Identities = 51/116 (43%), Positives = 68/116 (58%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
P +D F R G INL ADT II+DSDWNP ND+QA +R HRIGQ V +Y
Sbjct: 1247 PDSDRFVFLLCTRAGGLG--INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVY 1304
Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQAN------FTKQELDDILRFG 831
R VTRNS E + A K+ L V++ M G+++N +K+E++D+LR G
Sbjct: 1305 RLVTRNSYEREMFDRASLKLGLDKAVLQ-SMSGRESNVGGIQQLSKKEIEDLLRRG 1359
Score = 83 (34.3 bits), Expect = 4.1e-102, Sum P(3) = 4.1e-102
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 137 PEWLIANRVINSKTLRDGST-----IYLVKWRDLPYDKATWE-DENEDIPGLKE 184
P+++ +RV+ D T YLVKW LPY+ +TWE E+ D+ ++E
Sbjct: 770 PDYVEVDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEE 823
Score = 83 (34.3 bits), Expect = 4.3e-28, Sum P(2) = 4.3e-28
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 593 PEWLIANRVINSKTLRDGST-----IYLVKWRDLPYDKATWE-DENEDIPGLKE 640
P+++ +RV+ D T YLVKW LPY+ +TWE E+ D+ ++E
Sbjct: 770 PDYVEVDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEE 823
Score = 73 (30.8 bits), Expect = 4.6e-15, Sum P(2) = 4.6e-15
Identities = 21/72 (29%), Positives = 35/72 (48%)
Query: 614 YLVKWRDLPYDKATWE-DENEDIPGLKESIEFY--------------NMTKMLDILEDYL 658
YLVKW LPY+ +TWE E+ D+ ++E + N+ K +D DY
Sbjct: 796 YLVKWCSLPYEDSTWELKEDVDLAKIEEFEQLQASRPDTRRLDRPPSNIWKKIDQSRDYK 855
Query: 659 DGEGYKYERIDG 670
+G + +++G
Sbjct: 856 NGNQLREYQLEG 867
Score = 40 (19.1 bits), Expect = 4.3e-73, Sum P(4) = 4.3e-73
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 584 EDGHRYGIKPEW 595
++ YG+ PEW
Sbjct: 2588 KENSEYGVAPEW 2599
Score = 40 (19.1 bits), Expect = 4.3e-73, Sum P(4) = 4.3e-73
Identities = 21/104 (20%), Positives = 44/104 (42%)
Query: 656 DYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGG-LGINLATADTVI 714
D + EG K ER + + + + S+ ++P S L + + L +N ++
Sbjct: 2746 DSKESEG-KTERTESQSSENGGENSVS--SSPSTSSTAALNTAAAANPLALNPLLLSNIL 2802
Query: 715 IYDSDWNP--HNDIQAFSRAHRIGQQNKYINLATADTVIIYDSD 756
P + I S+++ QNK +L ++ +V + + D
Sbjct: 2803 YPGMLLTPGLNLHIPTLSQSNTFDVQNKNSDLGSSKSVEVKEED 2846
>UNIPROTKB|E2RDK8 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:AAEX03001603
EMBL:AAEX03001604 EMBL:AAEX03001605 Ensembl:ENSCAFT00000015413
Uniprot:E2RDK8
Length = 2902
Score = 681 (244.8 bits), Expect = 5.2e-102, Sum P(3) = 5.2e-102
Identities = 147/348 (42%), Positives = 211/348 (60%)
Query: 207 EDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQ 266
E+ + S+P T ++P ++ KK ++ + + G QL YQLEG+NWL ++W
Sbjct: 824 EEFEHLQASRPD--TRHLDRPPANIWKKIDQSRDYKN--GNQLREYQLEGLNWLLFNWYN 879
Query: 267 NIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYV 326
+ ILADEMGLGKTIQ+ITFLY + G +GPFL+ APLSTI NWEREF TW D V
Sbjct: 880 RRNCILADEMGLGKTIQSITFLYEILLTG-IRGPFLIIAPLSTIANWEREFRTWT-DINV 937
Query: 327 VTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSI 386
V Y G R +++ +++ + D+ +G RI +F ++T++E+I L +I
Sbjct: 938 VVYHGSLISRQMIQQYEMYFRDS--QG----RIIRGAYRFQAIITTFEMILGGCGELNAI 991
Query: 387 EWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFN 446
EW +++DEAHRLK+ K + L ++++K+LLTGTP P +F
Sbjct: 992 EWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFP 1051
Query: 447 DLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKY 506
++F EF D+ EEQV++L +L P MLRRLK DV K + K E I+ VEL+ +QKKY
Sbjct: 1052 SESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKY 1111
Query: 507 YKYILTRNFEALNPKGGGQQ--VSLLNIMMDLKKCCNHPYLFPAAAEE 552
Y+ IL +NF L+ KG GQ +L+N MM+L+KCCNHPYL A E+
Sbjct: 1112 YRAILEKNFSFLS-KGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEK 1158
Score = 331 (121.6 bits), Expect = 5.2e-102, Sum P(3) = 5.2e-102
Identities = 80/192 (41%), Positives = 115/192 (59%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M + LDILEDYL + Y YERIDG + G++RQ +IDRF+ P + +FVFLL TR+GGL
Sbjct: 1206 FSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL 1265
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDI 763
GINL ADT II+DSDWNP ND+QA +R HRIGQ NK + + T Y+ +
Sbjct: 1266 GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ-NKAVKVYRLVTRNSYEREM------ 1318
Query: 764 QAFSRAH-RIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGG------KQ 816
F RA ++G +K ++ R S + Q++K++ + L+ R G +
Sbjct: 1319 --FDRASLKLGL-DKAVLQSMSGRESNVGGIQQLSKKE--IEDLLRRGAYGAIMEEEDEG 1373
Query: 817 ANFTKQELDDIL 828
+ F ++++D IL
Sbjct: 1374 SKFCEEDIDQIL 1385
Score = 219 (82.2 bits), Expect = 3.1e-90, Sum P(3) = 3.1e-90
Identities = 51/116 (43%), Positives = 68/116 (58%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
P +D F R G INL ADT II+DSDWNP ND+QA +R HRIGQ V +Y
Sbjct: 1249 PDSDRFVFLLCTRAGGLG--INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVY 1306
Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQAN------FTKQELDDILRFG 831
R VTRNS E + A K+ L V++ M G+++N +K+E++D+LR G
Sbjct: 1307 RLVTRNSYEREMFDRASLKLGLDKAVLQ-SMSGRESNVGGIQQLSKKEIEDLLRRG 1361
Score = 83 (34.3 bits), Expect = 5.2e-102, Sum P(3) = 5.2e-102
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 137 PEWLIANRVINSKTLRDGST-----IYLVKWRDLPYDKATWE-DENEDIPGLKE 184
P+++ +RV+ D T YLVKW LPY+ +TWE E+ D+ ++E
Sbjct: 772 PDYVEVDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEE 825
Score = 83 (34.3 bits), Expect = 1.5e-26, Sum P(3) = 1.5e-26
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 593 PEWLIANRVINSKTLRDGST-----IYLVKWRDLPYDKATWE-DENEDIPGLKE 640
P+++ +RV+ D T YLVKW LPY+ +TWE E+ D+ ++E
Sbjct: 772 PDYVEVDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEE 825
Score = 71 (30.1 bits), Expect = 2.3e-13, Sum P(3) = 2.3e-13
Identities = 21/72 (29%), Positives = 34/72 (47%)
Query: 614 YLVKWRDLPYDKATWE-DENEDIPGLKESIEFY--------------NMTKMLDILEDYL 658
YLVKW LPY+ +TWE E+ D+ ++E N+ K +D DY
Sbjct: 798 YLVKWCSLPYEDSTWELKEDVDLAKIEEFEHLQASRPDTRHLDRPPANIWKKIDQSRDYK 857
Query: 659 DGEGYKYERIDG 670
+G + +++G
Sbjct: 858 NGNQLREYQLEG 869
Score = 40 (19.1 bits), Expect = 1.9e-71, Sum P(3) = 1.9e-71
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 584 EDGHRYGIKPEW 595
++ YG+ PEW
Sbjct: 2591 KENSEYGVAPEW 2602
Score = 37 (18.1 bits), Expect = 1.5e-26, Sum P(3) = 1.5e-26
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 541 NHPY-LFPAAAEEAPVQGGQ 559
N P LFP A+ +P+ G Q
Sbjct: 109 NQPNGLFPDVADGSPMWGHQ 128
>UNIPROTKB|E1BDZ3 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:DAAA02046444
IPI:IPI00705152 Ensembl:ENSBTAT00000002955 Uniprot:E1BDZ3
Length = 2900
Score = 680 (244.4 bits), Expect = 6.6e-102, Sum P(3) = 6.6e-102
Identities = 147/348 (42%), Positives = 211/348 (60%)
Query: 207 EDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQ 266
E+ + S+P T ++P ++ KK ++ + + G QL YQLEG+NWL ++W
Sbjct: 823 EEFEQLQASRPD--TRHLDRPPPNIWKKIDQSRDYKN--GNQLREYQLEGLNWLLFNWYN 878
Query: 267 NIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYV 326
+ ILADEMGLGKTIQ+ITFLY + G +GPFL+ APLSTI NWEREF TW D V
Sbjct: 879 RRNCILADEMGLGKTIQSITFLYEILLTG-IRGPFLIIAPLSTIANWEREFRTWT-DINV 936
Query: 327 VTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSI 386
V Y G R +++ +++ + D+ +G RI +F ++T++E+I L +I
Sbjct: 937 VVYHGSLISRQMIQQYEMYFRDS--QG----RIIRGAYRFQAIITTFEMILGGCGELNAI 990
Query: 387 EWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFN 446
EW +++DEAHRLK+ K + L ++++K+LLTGTP P +F
Sbjct: 991 EWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFP 1050
Query: 447 DLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKY 506
++F EF D+ EEQV++L +L P MLRRLK DV K + K E I+ VEL+ +QKKY
Sbjct: 1051 SESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKY 1110
Query: 507 YKYILTRNFEALNPKGGGQQ--VSLLNIMMDLKKCCNHPYLFPAAAEE 552
Y+ IL +NF L+ KG GQ +L+N MM+L+KCCNHPYL A E+
Sbjct: 1111 YRAILEKNFSFLS-KGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEK 1157
Score = 331 (121.6 bits), Expect = 6.6e-102, Sum P(3) = 6.6e-102
Identities = 80/192 (41%), Positives = 115/192 (59%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M + LDILEDYL + Y YERIDG + G++RQ +IDRF+ P + +FVFLL TR+GGL
Sbjct: 1205 FSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL 1264
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDI 763
GINL ADT II+DSDWNP ND+QA +R HRIGQ NK + + T Y+ +
Sbjct: 1265 GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ-NKAVKVYRLVTRNSYEREM------ 1317
Query: 764 QAFSRAH-RIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGG------KQ 816
F RA ++G +K ++ R S + Q++K++ + L+ R G +
Sbjct: 1318 --FDRASLKLGL-DKAVLQSMSGRESNVGGIQQLSKKE--IEDLLRRGAYGAIMEEEDEG 1372
Query: 817 ANFTKQELDDIL 828
+ F ++++D IL
Sbjct: 1373 SKFCEEDIDQIL 1384
Score = 219 (82.2 bits), Expect = 3.9e-90, Sum P(3) = 3.9e-90
Identities = 51/116 (43%), Positives = 68/116 (58%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
P +D F R G INL ADT II+DSDWNP ND+QA +R HRIGQ V +Y
Sbjct: 1248 PDSDRFVFLLCTRAGGLG--INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVY 1305
Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQAN------FTKQELDDILRFG 831
R VTRNS E + A K+ L V++ M G+++N +K+E++D+LR G
Sbjct: 1306 RLVTRNSYEREMFDRASLKLGLDKAVLQ-SMSGRESNVGGIQQLSKKEIEDLLRRG 1360
Score = 83 (34.3 bits), Expect = 6.6e-102, Sum P(3) = 6.6e-102
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 137 PEWLIANRVINSKTLRDGST-----IYLVKWRDLPYDKATWE-DENEDIPGLKE 184
P+++ +RV+ D T YLVKW LPY+ +TWE E+ D+ ++E
Sbjct: 771 PDYVEVDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEE 824
Score = 83 (34.3 bits), Expect = 1.5e-26, Sum P(3) = 1.5e-26
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 593 PEWLIANRVINSKTLRDGST-----IYLVKWRDLPYDKATWE-DENEDIPGLKE 640
P+++ +RV+ D T YLVKW LPY+ +TWE E+ D+ ++E
Sbjct: 771 PDYVEVDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEE 824
Score = 73 (30.8 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 21/72 (29%), Positives = 35/72 (48%)
Query: 614 YLVKWRDLPYDKATWE-DENEDIPGLKESIEFY--------------NMTKMLDILEDYL 658
YLVKW LPY+ +TWE E+ D+ ++E + N+ K +D DY
Sbjct: 797 YLVKWCSLPYEDSTWELKEDVDLAKIEEFEQLQASRPDTRHLDRPPPNIWKKIDQSRDYK 856
Query: 659 DGEGYKYERIDG 670
+G + +++G
Sbjct: 857 NGNQLREYQLEG 868
Score = 43 (20.2 bits), Expect = 1.2e-71, Sum P(3) = 1.2e-71
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 584 EDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDL 621
E G + + + L R ++S+ G YL + RDL
Sbjct: 2355 EGGLKLTFQKQGLTQRRPLDSEDCAPGQQQYLTRLRDL 2392
Score = 39 (18.8 bits), Expect = 3.0e-71, Sum P(3) = 3.0e-71
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 584 EDGHRYGIKPEW 595
++ YG+ PEW
Sbjct: 2591 KENAEYGVAPEW 2602
Score = 37 (18.1 bits), Expect = 1.5e-26, Sum P(3) = 1.5e-26
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 541 NHPY-LFPAAAEEAPVQGGQ 559
N P LFP A+ +P+ G Q
Sbjct: 109 NQPNGLFPDVADGSPMWGHQ 128
>UNIPROTKB|E1BS48 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:AADN02038292
EMBL:AADN02038293 EMBL:AADN02038294 EMBL:AADN02038295
EMBL:AADN02038296 EMBL:AADN02038297 EMBL:AADN02038298
IPI:IPI00579055 Ensembl:ENSGALT00000005902 Uniprot:E1BS48
Length = 2614
Score = 683 (245.5 bits), Expect = 2.3e-101, Sum P(3) = 2.3e-101
Identities = 157/361 (43%), Positives = 215/361 (59%)
Query: 204 ELQEDEDGAS--------GSKP--RRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQ 253
EL+ED D A S+P RR PP P + KK E + + G QL YQ
Sbjct: 808 ELKEDVDQAKIEEFEQLQASRPDSRRLDRPP--PNS--WKKIEHSREYKN--GNQLREYQ 861
Query: 254 LEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINW 313
LEG+NWL ++W + ILADEMGLGKTIQ+ITFLY + G +GPFL+ APLSTI NW
Sbjct: 862 LEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILLSG-IRGPFLIIAPLSTITNW 920
Query: 314 EREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSY 373
EREF TW D VV Y G R +++ +++ + D+ +G RI T +F ++T++
Sbjct: 921 EREFRTWT-DLNVVVYHGSMISRQMIQQYEMYFRDS--QG----RIVRGTYRFQAIITTF 973
Query: 374 ELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXX 433
E+I L +IEW +++DEAHRLK+ K + L ++++K+LLTGTP
Sbjct: 974 EMILGGCPELNAIEWRCVIIDEAHRLKNRNCKLLEGLKLMNLEHKVLLTGTPLQNTVEEL 1033
Query: 434 XXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEF 493
P +F ++F EF D+ EEQV++L +L P MLRRLK DV K + K E
Sbjct: 1034 FSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEET 1093
Query: 494 IVRVELSPMQKKYYKYILTRNFEALNPKGGGQQ--VSLLNIMMDLKKCCNHPYLFPAAAE 551
I+ VEL+ +QKKYY+ IL +NF L+ KG GQ +L+N MM+L+KCCNHPYL A E
Sbjct: 1094 IIEVELTNIQKKYYRAILEKNFAFLS-KGAGQANVPNLVNTMMELRKCCNHPYLIKGAEE 1152
Query: 552 E 552
+
Sbjct: 1153 K 1153
Score = 323 (118.8 bits), Expect = 2.3e-101, Sum P(3) = 2.3e-101
Identities = 81/194 (41%), Positives = 115/194 (59%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M + LDILEDYL + Y YERIDG + G++RQ +IDRF+ P + +FVFLL TR+GGL
Sbjct: 1201 FSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL 1260
Query: 704 GINLATADTVIIYDSDWNPHNDIQ-AFSRAHRIGQQNKYINLATADTVIIYDSDWNPHND 762
GINL ADT II+DSDWNP ND+Q A +R HRIGQ NK + + T Y+ +
Sbjct: 1261 GINLTAADTCIIFDSDWNPQNDLQKAQARCHRIGQ-NKAVKVYRLITRNSYEREM----- 1314
Query: 763 IQAFSRAH-RIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGG------K 815
F RA ++G V+ NSV + Q++K++ + L+ R G +
Sbjct: 1315 ---FDRASLKLGLDKAVLQSMSGRENSVGG-IQQLSKKE--IEDLLRRGAYGAIMDEEDE 1368
Query: 816 QANFTKQELDDILR 829
+ F ++++D IL+
Sbjct: 1369 GSKFCEEDIDQILQ 1382
Score = 201 (75.8 bits), Expect = 1.5e-88, Sum P(3) = 1.5e-88
Identities = 50/117 (42%), Positives = 66/117 (56%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQ-AFSRAHRIGQQNKVMI 780
P +D F R G INL ADT II+DSDWNP ND+Q A +R HRIGQ V +
Sbjct: 1244 PDSDRFVFLLCTRAGGLG--INLTAADTCIIFDSDWNPQNDLQKAQARCHRIGQNKAVKV 1301
Query: 781 YRFVTRNSVEERVTQVAKRKMMLTHLVVRP------GMGGKQANFTKQELDDILRFG 831
YR +TRNS E + A K+ L V++ +GG Q +K+E++D+LR G
Sbjct: 1302 YRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRENSVGGIQ-QLSKKEIEDLLRRG 1357
Score = 81 (33.6 bits), Expect = 2.3e-101, Sum P(3) = 2.3e-101
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 137 PEWLIANRVINSKTLRDGST-----IYLVKWRDLPYDKATWEDENEDIPGLK-ESIE 187
P+++ +RV+ D T YLVKW LPY+ +TWE + ED+ K E E
Sbjct: 767 PDYVEVDRVLEVSLCEDKDTGEPVVYYLVKWCSLPYEDSTWELK-EDVDQAKIEEFE 822
Score = 81 (33.6 bits), Expect = 4.0e-27, Sum P(2) = 4.0e-27
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 593 PEWLIANRVINSKTLRDGST-----IYLVKWRDLPYDKATWEDENEDIPGLK-ESIE 643
P+++ +RV+ D T YLVKW LPY+ +TWE + ED+ K E E
Sbjct: 767 PDYVEVDRVLEVSLCEDKDTGEPVVYYLVKWCSLPYEDSTWELK-EDVDQAKIEEFE 822
Score = 39 (18.8 bits), Expect = 1.5e-71, Sum P(3) = 1.5e-71
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 584 EDGHRYGIKPEW 595
++ YG+ PEW
Sbjct: 2588 KENPEYGVAPEW 2599
>UNIPROTKB|O14646 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0035064 "methylated histone residue
binding" evidence=IDA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=TAS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0006357 GO:GO:0006351 GO:GO:0006338
GO:GO:0004003 GO:GO:0035064 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
HOVERGEN:HBG005325 InterPro:IPR025260 Pfam:PF13907 CTD:1105
KO:K11367 EMBL:AF006513 EMBL:AC022121 EMBL:BC117134 IPI:IPI00297851
IPI:IPI00954192 RefSeq:NP_001261.2 UniGene:Hs.643465 PDB:2B2T
PDB:2B2U PDB:2B2V PDB:2B2W PDB:2B2Y PDB:4B4C PDBsum:2B2T
PDBsum:2B2U PDBsum:2B2V PDBsum:2B2W PDBsum:2B2Y PDBsum:4B4C
ProteinModelPortal:O14646 SMR:O14646 IntAct:O14646 STRING:O14646
PhosphoSite:O14646 PaxDb:O14646 PRIDE:O14646
Ensembl:ENST00000284049 GeneID:1105 KEGG:hsa:1105 UCSC:uc003knf.3
GeneCards:GC05M098219 H-InvDB:HIX0005061 HGNC:HGNC:1915
HPA:HPA022236 MIM:602118 neXtProt:NX_O14646 PharmGKB:PA26451
HOGENOM:HOG000207917 InParanoid:O14646 OMA:AETHENE
OrthoDB:EOG4PG601 PhylomeDB:O14646 DrugBank:DB00445
EvolutionaryTrace:O14646 GenomeRNAi:1105 NextBio:4580
ArrayExpress:O14646 Bgee:O14646 CleanEx:HS_CHD1
Genevestigator:O14646 GermOnline:ENSG00000153922 Uniprot:O14646
Length = 1710
Score = 679 (244.1 bits), Expect = 3.4e-101, Sum P(3) = 3.4e-101
Identities = 147/354 (41%), Positives = 207/354 (58%)
Query: 236 EKQPPFLDD-TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKE 294
+KQP ++ G++L YQL G+NWL +SW + ILADEMGLGKTIQTI+FL LF E
Sbjct: 467 KKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHE 526
Query: 295 GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGG 354
GPFL+ PLST+ +W+RE +TWA V Y+GD + R ++R H+ W T ++
Sbjct: 527 HQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHE--W--THHQ-- 580
Query: 355 KPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYS 414
+ +KF++LLT+YE++ D A LG + WA + VDEAHRLK++ S +K L +
Sbjct: 581 ------TKRLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFK 634
Query: 415 IQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPH 474
++LL+TGTP PEKF+ F+ E +E LH L P
Sbjct: 635 SNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGK-GREYGYASLHKELEPF 693
Query: 475 MLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMM 534
+LRR+K DV K++P+K E I+R+E+S +QK+YYK+ILTRN++AL+ G LNIMM
Sbjct: 694 LLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMM 753
Query: 535 DLKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
+LKKCCNH YL + Q +Q L R++G E G+R
Sbjct: 754 ELKKCCNHCYLIKPP-DNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNR 806
Score = 326 (119.8 bits), Expect = 3.4e-101, Sum P(3) = 3.4e-101
Identities = 59/101 (58%), Positives = 81/101 (80%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M +MLDIL +YL + ++R+DG+I G +R++++D FNA G+ F FLLSTR+GGL
Sbjct: 810 FSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGL 869
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINL 744
GINLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ K +N+
Sbjct: 870 GINLASADTVVIFDSDWNPQNDLQAQARAHRIGQK-KQVNI 909
Score = 250 (93.1 bits), Expect = 3.3e-93, Sum P(3) = 3.3e-93
Identities = 55/102 (53%), Positives = 70/102 (68%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ +V IYR VT+ SVEE + + AK+KM
Sbjct: 871 INLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKM 930
Query: 802 MLTHLVV-RPGMGGK-----------QANFTKQELDDILRFG 831
+L HLV+ R GK F K+EL IL+FG
Sbjct: 931 VLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKEELSAILKFG 972
Score = 71 (30.1 bits), Expect = 3.4e-101, Sum P(3) = 3.4e-101
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 119 HNINDEELEKKYYRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWED 174
+N E + + +Y I E +IA+ N K+ G Y KW+ LPY + +WED
Sbjct: 374 YNCQQELTDDLHKQYQIV-ERIIAHS--NQKSAA-GYPDYYCKWQGLPYSECSWED 425
Score = 69 (29.3 bits), Expect = 2.3e-27, Sum P(3) = 2.3e-27
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 594 EWLIANRVI---NSKTLRDGSTIYLVKWRDLPYDKATWED 630
++ I R+I N K+ G Y KW+ LPY + +WED
Sbjct: 387 QYQIVERIIAHSNQKSAA-GYPDYYCKWQGLPYSECSWED 425
Score = 56 (24.8 bits), Expect = 1.3e-99, Sum P(3) = 1.3e-99
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 149 KTLRDGSTIYLVKWRDLPYDKATWEDEN----EDIPGLKE 184
K G YL+KW+ + TWE E +++ G+K+
Sbjct: 309 KNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKK 348
Score = 56 (24.8 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 605 KTLRDGSTIYLVKWRDLPYDKATWEDEN----EDIPGLKE 640
K G YL+KW+ + TWE E +++ G+K+
Sbjct: 309 KNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKK 348
>MGI|MGI:88393 [details] [associations]
symbol:Chd1 "chromodomain helicase DNA binding protein 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=NAS] [GO:0004386 "helicase activity"
evidence=NAS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=NAS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006333 "chromatin assembly or disassembly" evidence=NAS]
[GO:0006338 "chromatin remodeling" evidence=IGI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 MGI:MGI:88393 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 GO:GO:0006338 GO:GO:0006333
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOVERGEN:HBG005325
InterPro:IPR025260 Pfam:PF13907 CTD:1105
GeneTree:ENSGT00560000076896 KO:K11367 HOGENOM:HOG000207917
OMA:AETHENE OrthoDB:EOG4PG601 EMBL:L10410 EMBL:CH466630
EMBL:BC115822 IPI:IPI00107999 PIR:A47392 RefSeq:NP_031716.2
UniGene:Mm.8137 ProteinModelPortal:P40201 SMR:P40201 IntAct:P40201
STRING:P40201 PhosphoSite:P40201 PaxDb:P40201 PRIDE:P40201
Ensembl:ENSMUST00000024627 GeneID:12648 KEGG:mmu:12648
InParanoid:Q14BJ0 NextBio:281852 Bgee:P40201 CleanEx:MM_CHD1
Genevestigator:P40201 GermOnline:ENSMUSG00000023852 Uniprot:P40201
Length = 1711
Score = 679 (244.1 bits), Expect = 3.4e-101, Sum P(3) = 3.4e-101
Identities = 147/354 (41%), Positives = 206/354 (58%)
Query: 236 EKQPPFLDD-TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKE 294
+KQP ++ G++L YQL G+NWL +SW + ILADEMGLGKTIQTI+FL LF E
Sbjct: 465 KKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHE 524
Query: 295 GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGG 354
GPFL+ PLST+ +W+RE +TWA V Y+GD + R ++R H+ W
Sbjct: 525 HQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHE--WMH------ 576
Query: 355 KPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYS 414
P ++ +KF++LLT+YE++ D A LG + WA + VDEAHRLK++ S +K L +
Sbjct: 577 -P---QTKRLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFK 632
Query: 415 IQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPH 474
++LL+TGTP PEKF+ F+ E +E LH L P
Sbjct: 633 SNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGK-GREYGYASLHKELEPF 691
Query: 475 MLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMM 534
+LRR+K DV K++P+K E I+R+E+S +QK+YYK+ILTRN++AL+ G LNIMM
Sbjct: 692 LLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMM 751
Query: 535 DLKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
+LKKCCNH YL + Q +Q L R++G E G+R
Sbjct: 752 ELKKCCNHCYLIKPP-DNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNR 804
Score = 326 (119.8 bits), Expect = 3.4e-101, Sum P(3) = 3.4e-101
Identities = 59/101 (58%), Positives = 81/101 (80%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M +MLDIL +YL + ++R+DG+I G +R++++D FNA G+ F FLLSTR+GGL
Sbjct: 808 FSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGL 867
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINL 744
GINLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ K +N+
Sbjct: 868 GINLASADTVVIFDSDWNPQNDLQAQARAHRIGQK-KQVNI 907
Score = 250 (93.1 bits), Expect = 3.3e-93, Sum P(3) = 3.3e-93
Identities = 55/102 (53%), Positives = 70/102 (68%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ +V IYR VT+ SVEE + + AK+KM
Sbjct: 869 INLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKM 928
Query: 802 MLTHLVV-RPGMGGK-----------QANFTKQELDDILRFG 831
+L HLV+ R GK F K+EL IL+FG
Sbjct: 929 VLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKEELSAILKFG 970
Score = 71 (30.1 bits), Expect = 3.4e-101, Sum P(3) = 3.4e-101
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 119 HNINDEELEKKYYRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWED 174
+N E + + +Y I E +IA+ N K+ G Y KW+ LPY + +WED
Sbjct: 372 YNCQQELTDDLHKQYQIV-ERIIAHS--NQKSAA-GLPDYYCKWQGLPYSECSWED 423
Score = 69 (29.3 bits), Expect = 3.7e-27, Sum P(3) = 3.7e-27
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 594 EWLIANRVI---NSKTLRDGSTIYLVKWRDLPYDKATWED 630
++ I R+I N K+ G Y KW+ LPY + +WED
Sbjct: 385 QYQIVERIIAHSNQKSAA-GLPDYYCKWQGLPYSECSWED 423
Score = 54 (24.1 bits), Expect = 2.1e-99, Sum P(3) = 2.1e-99
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 154 GSTIYLVKWRDLPYDKATWEDEN----EDIPGLKE 184
G YL+KW+ + TWE E +++ G+K+
Sbjct: 312 GDIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKK 346
Score = 54 (24.1 bits), Expect = 4.4e-25, Sum P(2) = 4.4e-25
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 610 GSTIYLVKWRDLPYDKATWEDEN----EDIPGLKE 640
G YL+KW+ + TWE E +++ G+K+
Sbjct: 312 GDIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKK 346
>ZFIN|ZDB-GENE-030131-497 [details] [associations]
symbol:chd9 "chromodomain helicase DNA binding
protein 9" species:7955 "Danio rerio" [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 ZFIN:ZDB-GENE-030131-497
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 GeneTree:ENSGT00560000077077
EMBL:CR318585 EMBL:CU464124 EMBL:FP015866 IPI:IPI00972236
Ensembl:ENSDART00000027807 Bgee:E7F7W5 Uniprot:E7F7W5
Length = 2948
Score = 668 (240.2 bits), Expect = 3.7e-101, Sum P(4) = 3.7e-101
Identities = 146/340 (42%), Positives = 202/340 (59%)
Query: 215 SKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILAD 274
+KP +T E+P KK EK + ++ L YQLEG+NWL ++W + ILAD
Sbjct: 883 AKP--HTNRMERPPASHWKKLEKSRKYCNENS--LRDYQLEGVNWLLFNWYNRRNCILAD 938
Query: 275 EMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKD 334
EMGLGKTIQ+ITFL +++ G KGPFL+ APLSTI NWEREF TW V+ Y G
Sbjct: 939 EMGLGKTIQSITFLEEIYRTG-IKGPFLIIAPLSTIANWEREFRTWT-HLNVIVYHGSVV 996
Query: 335 CRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVD 394
R +L+ +++ D+ R IR + +F ++T++E+I L +I+W +++D
Sbjct: 997 SRQMLQQYEMYCRDSQGRV-----IRGA-YRFQAVITTFEMILGGCPELNAIDWRCVIID 1050
Query: 395 EAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAE 454
EAHRLK+ K + S+++K+LLTGTP P +F +F E
Sbjct: 1051 EAHRLKNKNCKLLEGFKLMSLEHKVLLTGTPLQNTVEELFSLLHFLEPTRFPSENTFMQE 1110
Query: 455 FADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRN 514
F D+ EEQV++L +L P MLRRLK DV K + K E I+ VEL+ +QKKYY+ IL +N
Sbjct: 1111 FGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKN 1170
Query: 515 FEALNPKGGGQQ--VSLLNIMMDLKKCCNHPYLFPAAAEE 552
F L KG GQ +LLN MM+L+KCCNHPYL A E+
Sbjct: 1171 FSFL-AKGAGQANVPNLLNTMMELRKCCNHPYLIKGAEEK 1209
Score = 324 (119.1 bits), Expect = 3.7e-101, Sum P(4) = 3.7e-101
Identities = 62/101 (61%), Positives = 76/101 (75%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M + LDILEDYL Y YERIDG + G++RQ +IDRF+ P + +FVFLL TR+GGL
Sbjct: 1257 FSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL 1316
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINL 744
GINL ADT II+DSDWNP ND+QA +R HRIGQ NK + +
Sbjct: 1317 GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ-NKAVKV 1356
Score = 208 (78.3 bits), Expect = 5.1e-89, Sum P(4) = 5.1e-89
Identities = 50/119 (42%), Positives = 65/119 (54%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
P +D F R G INL ADT II+DSDWNP ND+QA +R HRIGQ V +Y
Sbjct: 1300 PDSDRFVFLLCTRAGGLG--INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVY 1357
Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRP---------GMGGKQANFTKQELDDILRFG 831
R +TRNS E + A K+ L V++ G G Q +K+E++D+LR G
Sbjct: 1358 RLITRNSYEREMFDRASLKLGLDKAVLQSMSGRDNSLAGGGQMQQQLSKKEIEDLLRRG 1416
Score = 76 (31.8 bits), Expect = 3.7e-101, Sum P(4) = 3.7e-101
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 137 PEWLIANRVINSKTLRD---GSTI--YLVKWRDLPYDKATWEDENEDIPGLK 183
P+++ +RV+ D G + YLVKW LPY+ +TWE ED+ K
Sbjct: 823 PDYVEVDRVLEVSYCEDKDSGEPVVYYLVKWCSLPYEDSTWE-LMEDVDQTK 873
Score = 76 (31.8 bits), Expect = 3.0e-25, Sum P(4) = 3.0e-25
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 593 PEWLIANRVINSKTLRD---GSTI--YLVKWRDLPYDKATWEDENEDIPGLK 639
P+++ +RV+ D G + YLVKW LPY+ +TWE ED+ K
Sbjct: 823 PDYVEVDRVLEVSYCEDKDSGEPVVYYLVKWCSLPYEDSTWE-LMEDVDQTK 873
Score = 46 (21.3 bits), Expect = 3.7e-101, Sum P(4) = 3.7e-101
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 907 LTGRRSAKKKEMSKQERDRPLPPLLARVGGNIEVLNQLE 945
L G + K+KE+ + ++ P +A VG I N+L+
Sbjct: 2549 LAGEDAPKRKELDQWLKEHP--GFVADVGAFIPTANKLQ 2585
Score = 41 (19.5 bits), Expect = 1.7e-97, Sum P(4) = 1.7e-97
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 140 LIANRVINSKTLRDGSTI----YLVKWRDLPYDKATWEDENE 177
++A+RV+ K + G + Y VK+++ Y W E +
Sbjct: 748 IMASRVVK-KEVSPGVLVEIEEYFVKYKNYSYLHCEWATEQQ 788
Score = 41 (19.5 bits), Expect = 2.3e-22, Sum P(3) = 2.3e-22
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 596 LIANRVINSKTLRDGSTI----YLVKWRDLPYDKATWEDENE 633
++A+RV+ K + G + Y VK+++ Y W E +
Sbjct: 748 IMASRVVK-KEVSPGVLVEIEEYFVKYKNYSYLHCEWATEQQ 788
Score = 40 (19.1 bits), Expect = 2.6e-69, Sum P(3) = 2.6e-69
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 584 EDGHRYGIKPEW 595
++ YG+ PEW
Sbjct: 2642 QENPEYGVPPEW 2653
Score = 39 (18.8 bits), Expect = 3.3e-69, Sum P(3) = 3.3e-69
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 543 PYLFPAAAEEAPVQGGQYE 561
P L PAA+E Q GQ E
Sbjct: 2882 PALQPAASEAMAPQPGQSE 2900
Score = 38 (18.4 bits), Expect = 4.7e-22, Sum P(3) = 4.7e-22
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 81 HPQLLKSYMKKMNNDF 96
HP L+K +K+ DF
Sbjct: 1199 HPYLIKGAEEKIMEDF 1214
>UNIPROTKB|F1RT88 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060324 "face development" evidence=IEA] [GO:0060123
"regulation of growth hormone secretion" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0050890 "cognition"
evidence=IEA] [GO:0048844 "artery morphogenesis" evidence=IEA]
[GO:0048752 "semicircular canal morphogenesis" evidence=IEA]
[GO:0043584 "nose development" evidence=IEA] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030540 "female genitalia development" evidence=IEA]
[GO:0030217 "T cell differentiation" evidence=IEA] [GO:0021545
"cranial nerve development" evidence=IEA] [GO:0008015 "blood
circulation" evidence=IEA] [GO:0007628 "adult walking behavior"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0008015
GO:GO:0003007 GO:GO:0050890 GO:GO:0001701 GO:GO:0040018
GO:GO:0007417 GO:GO:0003682 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 EMBL:CU179734
Ensembl:ENSSSCT00000006828 Uniprot:F1RT88
Length = 2991
Score = 710 (255.0 bits), Expect = 3.9e-101, Sum P(3) = 3.9e-101
Identities = 165/411 (40%), Positives = 236/411 (57%)
Query: 225 EKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQT 284
E+P D KK E + ++ +L YQLEG+NWL ++W + ILADEMGLGKTIQ+
Sbjct: 939 ERPPADDWKKSESSREYKNNN--KLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQS 996
Query: 285 ITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 344
ITFLY ++ +G GPFLV APLSTI NWEREF TW + VV Y G + R ++ +++
Sbjct: 997 ITFLYEIYLKG-IHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEM 1054
Query: 345 SWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQS 404
++D +G R+ + KFH ++T++E+I D L +I W +V+DEAHRLK+
Sbjct: 1055 YFKDP--QG----RVIKGSYKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNC 1108
Query: 405 KFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQV 464
K + L +++K+LLTGTP P +F T+F EF D+ EEQV
Sbjct: 1109 KLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDLKTEEQV 1168
Query: 465 KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGG 524
++L +L P MLRRLK DV KN+ K E I+ VEL+ +QKKYY+ IL +NF L+ KGGG
Sbjct: 1169 QKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLS-KGGG 1227
Query: 525 QQ--VSLLNIMMDLKKCCNHPYLFPAAAEEA--------PVQGGQYEIQALTRAAGXXXX 574
Q +LLN MM+L+KCCNHPYL A E+ +++QA+ +AAG
Sbjct: 1228 QANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVL 1287
Query: 575 XXXXXXXXXEDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDK 625
GHR LI ++++ + + YL++ R PY++
Sbjct: 1288 IDKLLPKLKAGGHRV------LIFSQMVRCLDILED---YLIQ-RRYPYER 1328
Score = 300 (110.7 bits), Expect = 3.9e-101, Sum P(3) = 3.9e-101
Identities = 76/195 (38%), Positives = 113/195 (57%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M + LDILEDYL Y YERIDG + G++RQ +IDRF+ P + +FVFLL TR+GGL
Sbjct: 1305 FSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL 1364
Query: 704 GINLATADTVIIYDSDWNPH--NDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHN 761
GINL ADT II+DSDWNP + QA +R HRIGQ +K + + T Y+ +
Sbjct: 1365 GINLTAADTCIIFDSDWNPKMISSFQAQARCHRIGQ-SKSVKIYRLITRNSYEREM---- 1419
Query: 762 DIQAFSRAH-RIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGG------ 814
F +A ++G +K ++ R + V Q++K+++ ++R G G
Sbjct: 1420 ----FDKASLKLGL-DKAVLQSMSGRENAPNGVQQLSKKEI---EDLLRKGAYGALMDEE 1471
Query: 815 -KQANFTKQELDDIL 828
+ + F ++++D IL
Sbjct: 1472 DEGSKFCEEDIDQIL 1486
Score = 189 (71.6 bits), Expect = 1.8e-89, Sum P(3) = 1.8e-89
Identities = 48/117 (41%), Positives = 63/117 (53%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPH--NDIQAFSRAHRIGQQNKVM 779
P +D F R G INL ADT II+DSDWNP + QA +R HRIGQ V
Sbjct: 1348 PDSDRFVFLLCTRAGGLG--INLTAADTCIIFDSDWNPKMISSFQAQARCHRIGQSKSVK 1405
Query: 780 IYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQA-----NFTKQELDDILRFG 831
IYR +TRNS E + A K+ L V++ G + A +K+E++D+LR G
Sbjct: 1406 IYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENAPNGVQQLSKKEIEDLLRKG 1462
Score = 77 (32.2 bits), Expect = 3.9e-101, Sum P(3) = 3.9e-101
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 137 PEWLIANRVIN-SKTLRD-GSTI--YLVKWRDLPYDKATWEDENEDIPGLK-ESIE 187
P+++ +R+++ +++ D G + YLVKW LPY+ +TWE +DI K E E
Sbjct: 872 PDYVEVDRIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWE-LRQDIDQAKIEEFE 926
Score = 77 (32.2 bits), Expect = 7.4e-23, Sum P(3) = 7.4e-23
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 593 PEWLIANRVIN-SKTLRD-GSTI--YLVKWRDLPYDKATWEDENEDIPGLK-ESIE 643
P+++ +R+++ +++ D G + YLVKW LPY+ +TWE +DI K E E
Sbjct: 872 PDYVEVDRIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWE-LRQDIDQAKIEEFE 926
Score = 40 (19.1 bits), Expect = 3.0e-97, Sum P(3) = 3.0e-97
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 204 ELQEDE-DGASGSKPRRYTPP----PEKPTTDLRKKYEKQP 239
EL + DG+ K ++ P P++P KK K+P
Sbjct: 621 ELNRNSLDGSQEEKKKKKRPKAKKDPKEPKDPKEKKEPKEP 661
>FB|FBgn0086902 [details] [associations]
symbol:kis "kismet" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0007350 "blastoderm segmentation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0019730 "antimicrobial humoral
response" evidence=IMP] [GO:0007298 "border follicle cell
migration" evidence=IMP] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0007411 "axon guidance" evidence=IMP]
[GO:0016322 "neuron remodeling" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0007614 "short-term memory"
evidence=IMP] [GO:0046622 "positive regulation of organ growth"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0007476 "imaginal disc-derived
wing morphogenesis" evidence=IMP] [GO:0007031 "peroxisome
organization" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0007411 GO:GO:0045892 GO:GO:0005875
EMBL:AE014134 GO:GO:0003677 GO:GO:0006200 GO:GO:0016322
GO:GO:0007031 GO:GO:0016887 GO:GO:0007298 GO:GO:0007614
GO:GO:0004386 GO:GO:0007379 GO:GO:0046622 GO:GO:0007476
GO:GO:0019730 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0007350 InterPro:IPR023780
KO:K14437 GeneTree:ENSGT00560000077077 RefSeq:NP_001137761.1
UniGene:Dm.3182 ProteinModelPortal:B7Z002 SMR:B7Z002 STRING:B7Z002
EnsemblMetazoa:FBtr0299837 GeneID:33185 KEGG:dme:Dmel_CG3696
CTD:33185 FlyBase:FBgn0086902 OMA:TTFEMIV OrthoDB:EOG4BZKHC
PhylomeDB:B7Z002 GenomeRNAi:33185 NextBio:782323 Bgee:B7Z002
Uniprot:B7Z002
Length = 5517
Score = 664 (238.8 bits), Expect = 5.2e-101, Sum P(4) = 5.2e-101
Identities = 145/358 (40%), Positives = 211/358 (58%)
Query: 204 ELQEDEDGASGSKPRRYTPPPEK--------PTTDLRKKYEKQPPFLDDTGMQLHAYQLE 255
EL+ED D + R+ P++ P +L KK EK P + G L YQLE
Sbjct: 1978 ELEEDVDNDKIEQYLRFNKIPQRSEWKSKKRPHPELWKKLEKTPVYKG--GNSLRPYQLE 2035
Query: 256 GINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWER 315
G+NWL++SW + ILADEMGLGKTIQ++TF++S+++ G +GPFLV APLSTI NW+R
Sbjct: 2036 GLNWLKFSWYNTHNCILADEMGLGKTIQSLTFVHSVYEYG-IRGPFLVIAPLSTIPNWQR 2094
Query: 316 EFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYEL 375
EFE W D VV Y G + +++D++ ++ GK + +KF+VL+T++E+
Sbjct: 2095 EFEGWT-DMNVVVYHGSVTSKQMIQDYEYYYK---TESGK---VLKEPIKFNVLITTFEM 2147
Query: 376 ITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXX 435
I D L + W + V+DEAHRLK+ K + L ++++++LL+GTP
Sbjct: 2148 IVTDYMDLKAFNWRLCVIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFS 2207
Query: 436 XXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIV 495
P +F+ F +EF + EE+V +L LL P MLRRLK DV K++ K E I+
Sbjct: 2208 LLNFLEPSQFSSQEEFMSEFGSLRTEEEVNKLQALLKPMMLRRLKDDVEKSLAPKEETII 2267
Query: 496 RVELSPMQKKYYKYILTRNFEALNPKGGGQQV-SLLNIMMDLKKCCNHPYLFPAAAEE 552
VEL+ +QKKYY+ IL +NF L + +L+N MM+L+KCC HPYL A E+
Sbjct: 2268 EVELTNIQKKYYRGILEQNFSFLKKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEEQ 2325
Score = 336 (123.3 bits), Expect = 5.2e-101, Sum P(4) = 5.2e-101
Identities = 81/193 (41%), Positives = 117/193 (60%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M + LDILEDYL Y +ERIDG I G++RQE+IDR++ PG+ +FVFLL T++GGL
Sbjct: 2372 FSQMVRCLDILEDYLVYRKYPFERIDGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGL 2431
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADTVIIYDSDWNPHN 761
GINL ADTVIIYDSDWNP ND+QA +R HRIGQ+ K L +T Y+ +
Sbjct: 2432 GINLTAADTVIIYDSDWNPQNDLQAQARCHRIGQRKMVKIYRLLCRNT---YEREM---- 2484
Query: 762 DIQAFSRAH-RIGQQNKVMIYRFVTRNSVEERVTQVAKRKM--MLTHLVVRPGMGGKQAN 818
F +A ++G +K ++ T+ S + Q++K+++ +L M A
Sbjct: 2485 ----FDKASMKLGL-DKAVLQSMNTQGSKDGNNKQLSKKEIEDLLKKGAYGAVMDDDNAG 2539
Query: 819 --FTKQELDDILR 829
F ++++D IL+
Sbjct: 2540 DKFCEEDIDSILK 2552
Score = 211 (79.3 bits), Expect = 6.3e-88, Sum P(4) = 6.3e-88
Identities = 45/95 (47%), Positives = 60/95 (63%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INL ADTVIIYDSDWNP ND+QA +R HRIGQ+ V IYR + RN+ E + A K+
Sbjct: 2433 INLTAADTVIIYDSDWNPQNDLQAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKL 2492
Query: 802 MLTHLVVRP--GMGGKQAN---FTKQELDDILRFG 831
L V++ G K N +K+E++D+L+ G
Sbjct: 2493 GLDKAVLQSMNTQGSKDGNNKQLSKKEIEDLLKKG 2527
Score = 88 (36.0 bits), Expect = 5.2e-101, Sum P(4) = 5.2e-101
Identities = 26/80 (32%), Positives = 41/80 (51%)
Query: 111 KRMARLNR-HNINDEELEKKYYRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDK 169
K+ +LN NI DE + + + + ++ V +T + + YLVKW+ LPY+
Sbjct: 1919 KQSQQLNIFENIEDEPFNQDF----TEVDRVLDMSVHTDETSGETTKHYLVKWKSLPYED 1974
Query: 170 ATWEDENEDIPGLKESIEFY 189
TWE E ED+ + IE Y
Sbjct: 1975 CTWELE-EDVDN--DKIEQY 1991
Score = 82 (33.9 bits), Expect = 3.7e-26, Sum P(3) = 3.7e-26
Identities = 17/32 (53%), Positives = 21/32 (65%)
Query: 614 YLVKWRDLPYDKATWEDENEDIPGLKESIEFY 645
YLVKW+ LPY+ TWE E ED+ + IE Y
Sbjct: 1963 YLVKWKSLPYEDCTWELE-EDVDN--DKIEQY 1991
Score = 47 (21.6 bits), Expect = 1.0e-96, Sum P(4) = 1.0e-96
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 158 YLVKWRDLPYDKATWEDENEDIPG 181
Y VK+R+ Y W E E + G
Sbjct: 1882 YFVKYRNFSYLHCEWRTEEELLKG 1905
Score = 47 (21.6 bits), Expect = 7.2e-96, Sum P(3) = 7.2e-96
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 204 ELQEDEDGASGSK-PRRYTPP--PEKPTTDLRKKYEK 237
EL DG+ K PR+ P P KP D K +K
Sbjct: 1293 ELDTSTDGSGKKKKPRKPRTPKDPNKPPRDRTPKAKK 1329
Score = 47 (21.6 bits), Expect = 1.8e-23, Sum P(3) = 1.8e-23
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 614 YLVKWRDLPYDKATWEDENEDIPG 637
Y VK+R+ Y W E E + G
Sbjct: 1882 YFVKYRNFSYLHCEWRTEEELLKG 1905
Score = 38 (18.4 bits), Expect = 5.2e-101, Sum P(4) = 5.2e-101
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 42 MARQILLALFLGTGDRYLQTSSPKSPSQNLD 72
M Q++LA+ +G + L K+P D
Sbjct: 1645 MVVQLVLAMRMGKRELILDKPKEKAPEPKQD 1675
Score = 38 (18.4 bits), Expect = 3.7e-26, Sum P(3) = 3.7e-26
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 298 KGPFLVSAPLSTI 310
KGP V+AP++T+
Sbjct: 485 KGPAPVAAPVNTL 497
>UNIPROTKB|B5DE69 [details] [associations]
symbol:chd8 "Chromodomain-helicase-DNA-binding protein 8"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0016055 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG107676 CTD:57680
KO:K04494 EMBL:BC168549 RefSeq:NP_001131089.2 UniGene:Str.42730
GeneID:100192376 KEGG:xtr:100192376 Xenbase:XB-GENE-966847
Uniprot:B5DE69
Length = 2184
Score = 676 (243.0 bits), Expect = 8.5e-101, Sum P(3) = 8.5e-101
Identities = 157/383 (40%), Positives = 216/383 (56%)
Query: 204 ELQED-EDGASGSKPRRYTPPPE-----KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGI 257
EL+ED +DG R P +P KK E + G QL YQLEG+
Sbjct: 706 ELKEDVDDGKIEEFKRIEARQPNLKRVARPAATSWKKLELSREY--QNGNQLREYQLEGV 763
Query: 258 NWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREF 317
NWL ++W + ILADEMGLGKTIQ+ITFL ++ G +GPFLV APLSTI NWEREF
Sbjct: 764 NWLLFNWYNRQNCILADEMGLGKTIQSITFLQEVYNVG-IRGPFLVIAPLSTITNWEREF 822
Query: 318 ETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYELIT 377
+W + Y G R +++ +++ +D+ +G R+ KF L+T++E++
Sbjct: 823 GSWT-QMNTIVYHGSLASRQMIQQYEMYCKDS--KG----RLIPGAYKFDALITTFEMVL 875
Query: 378 NDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXX 437
+D L IEW +++DEAHRLK+ K L +++K+LLTGTP
Sbjct: 876 SDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLL 935
Query: 438 XXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRV 497
P +F+ F +F D+ EEQV++L +L P MLRRLK DV KN+ K E I+ V
Sbjct: 936 HFLEPTQFSSEAEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEV 995
Query: 498 ELSPMQKKYYKYILTRNFEALNPKGGGQQ--VSLLNIMMDLKKCCNHPYLFPAAAE---- 551
EL+ +QKKYY+ IL +NF L KG Q +LLN MM+L+KCCNHPYL A E
Sbjct: 996 ELTNIQKKYYRAILEKNFSFLT-KGASQSNTPNLLNTMMELRKCCNHPYLITGAEEKIIS 1054
Query: 552 ---EA-PVQGGQYEIQALTRAAG 570
EA PV + +QA+ R++G
Sbjct: 1055 EFREATPVVPPDFHVQAMVRSSG 1077
Score = 324 (119.1 bits), Expect = 8.5e-101, Sum P(3) = 8.5e-101
Identities = 64/108 (59%), Positives = 77/108 (71%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M + LDILEDYL Y YERIDG + G+MRQ +IDRF+ P + +FVFLL TR+GGL
Sbjct: 1099 FSQMVRCLDILEDYLIQRRYLYERIDGRVRGNMRQAAIDRFSRPDSDRFVFLLCTRAGGL 1158
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADT 749
GINL ADT II+DSDWNP ND+QA +R HRIGQ K L T ++
Sbjct: 1159 GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKIYRLITRNS 1206
Score = 219 (82.2 bits), Expect = 9.2e-90, Sum P(3) = 9.2e-90
Identities = 52/116 (44%), Positives = 65/116 (56%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
P +D F R G INL ADT II+DSDWNP ND+QA +R HRIGQ V IY
Sbjct: 1142 PDSDRFVFLLCTRAGGLG--INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKIY 1199
Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRPGMG------GKQANFTKQELDDILRFG 831
R +TRNS E + A K+ L V++ G G FTK+E++D+LR G
Sbjct: 1200 RLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDNHLSGPIQQFTKKEIEDLLRKG 1255
Score = 78 (32.5 bits), Expect = 8.5e-101, Sum P(3) = 8.5e-101
Identities = 18/48 (37%), Positives = 31/48 (64%)
Query: 137 PEWLIANRVINSK--TLRD-GSTI--YLVKWRDLPYDKATWEDENEDI 179
P+++ +R+++ T +D G + YLVKW LPY+ +TWE + ED+
Sbjct: 665 PDYVEVDRILDESHSTDKDNGEPVVYYLVKWCSLPYEDSTWELK-EDV 711
Score = 78 (32.5 bits), Expect = 2.5e-26, Sum P(3) = 2.5e-26
Identities = 18/48 (37%), Positives = 31/48 (64%)
Query: 593 PEWLIANRVINSK--TLRD-GSTI--YLVKWRDLPYDKATWEDENEDI 635
P+++ +R+++ T +D G + YLVKW LPY+ +TWE + ED+
Sbjct: 665 PDYVEVDRILDESHSTDKDNGEPVVYYLVKWCSLPYEDSTWELK-EDV 711
Score = 47 (21.6 bits), Expect = 9.6e-27, Sum P(3) = 9.6e-27
Identities = 22/78 (28%), Positives = 32/78 (41%)
Query: 297 CKGPFLVSAPLSTIINWEREFETWAP-DFYVVTYVGDKDCRIVLRDHDISWEDTANRGGK 355
C P+L++ II+ RE P DF+V V ++VL D + GG
Sbjct: 1039 CNHPYLITGAEEKIISEFREATPVVPPDFHVQAMVRSSG-KLVLIDKLLP---KLRAGGH 1094
Query: 356 PCRIRSSTVKFHVLLTSY 373
I S V+ +L Y
Sbjct: 1095 KVLIFSQMVRCLDILEDY 1112
Score = 43 (20.2 bits), Expect = 2.5e-26, Sum P(3) = 2.5e-26
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 444 KFNDLTSFQAEFADISKEEQVKRLHDLL 471
K+ + + E+A I + E+ KR+H L
Sbjct: 615 KYKNYSYLHCEWATIEQLERDKRIHQKL 642
>UNIPROTKB|E2QUI5 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 CTD:1105
GeneTree:ENSGT00560000076896 KO:K11367 EMBL:AAEX03002026
RefSeq:XP_848459.1 Ensembl:ENSCAFT00000012332 GeneID:488891
KEGG:cfa:488891 NextBio:20862162 Uniprot:E2QUI5
Length = 1711
Score = 673 (242.0 bits), Expect = 1.5e-100, Sum P(3) = 1.5e-100
Identities = 146/354 (41%), Positives = 205/354 (57%)
Query: 236 EKQPPFLDD-TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKE 294
+KQP ++ ++L YQL G+NWL +SW + ILADEMGLGKTIQTI+FL LF E
Sbjct: 466 KKQPSYIGGHESLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHE 525
Query: 295 GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGG 354
GPFL+ PLST+ +W+RE +TWA V Y+GD + R ++R H+ W
Sbjct: 526 HQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHE--WMH------ 577
Query: 355 KPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYS 414
P ++ +KF++LLT+YE++ D A LG + WA + VDEAHRLK++ S +K L +
Sbjct: 578 -P---QTKRLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFK 633
Query: 415 IQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPH 474
++LL+TGTP PEKF+ F+ E +E LH L P
Sbjct: 634 SNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGK-GREYGYASLHKELEPF 692
Query: 475 MLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMM 534
+LRR+K DV K++P+K E I+R+E+S +QK+YYK+ILTRN++AL+ G LNIMM
Sbjct: 693 LLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMM 752
Query: 535 DLKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
+LKKCCNH YL + Q +Q L R++G E G+R
Sbjct: 753 ELKKCCNHCYLIKPP-DNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNR 805
Score = 326 (119.8 bits), Expect = 1.5e-100, Sum P(3) = 1.5e-100
Identities = 59/101 (58%), Positives = 81/101 (80%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M +MLDIL +YL + ++R+DG+I G +R++++D FNA G+ F FLLSTR+GGL
Sbjct: 809 FSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGL 868
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINL 744
GINLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ K +N+
Sbjct: 869 GINLASADTVVIFDSDWNPQNDLQAQARAHRIGQK-KQVNI 908
Score = 250 (93.1 bits), Expect = 1.4e-92, Sum P(3) = 1.4e-92
Identities = 55/102 (53%), Positives = 70/102 (68%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ +V IYR VT+ SVEE + + AK+KM
Sbjct: 870 INLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKM 929
Query: 802 MLTHLVV-RPGMGGK-----------QANFTKQELDDILRFG 831
+L HLV+ R GK F K+EL IL+FG
Sbjct: 930 VLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKEELSAILKFG 971
Score = 71 (30.1 bits), Expect = 1.5e-100, Sum P(3) = 1.5e-100
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 119 HNINDEELEKKYYRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWED 174
+N E + + +Y I E +IA+ N K+ G Y KW+ LPY + +WED
Sbjct: 373 YNCQQELTDDLHKQYQIV-ERIIAHS--NQKSAA-GYPDYYCKWQGLPYSECSWED 424
Score = 69 (29.3 bits), Expect = 2.3e-27, Sum P(3) = 2.3e-27
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 594 EWLIANRVI---NSKTLRDGSTIYLVKWRDLPYDKATWED 630
++ I R+I N K+ G Y KW+ LPY + +WED
Sbjct: 386 QYQIVERIIAHSNQKSAA-GYPDYYCKWQGLPYSECSWED 424
Score = 56 (24.8 bits), Expect = 5.6e-99, Sum P(3) = 5.6e-99
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 149 KTLRDGSTIYLVKWRDLPYDKATWEDEN----EDIPGLKE 184
K G YL+KW+ + TWE E +++ G+K+
Sbjct: 308 KNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKK 347
Score = 56 (24.8 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 605 KTLRDGSTIYLVKWRDLPYDKATWEDEN----EDIPGLKE 640
K G YL+KW+ + TWE E +++ G+K+
Sbjct: 308 KNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKK 347
>UNIPROTKB|J9P6Y8 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AETHENE EMBL:AAEX03002026 Ensembl:ENSCAFT00000043995
Uniprot:J9P6Y8
Length = 1782
Score = 673 (242.0 bits), Expect = 1.9e-100, Sum P(3) = 1.9e-100
Identities = 146/354 (41%), Positives = 205/354 (57%)
Query: 236 EKQPPFLDD-TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKE 294
+KQP ++ ++L YQL G+NWL +SW + ILADEMGLGKTIQTI+FL LF E
Sbjct: 449 KKQPSYIGGHESLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHE 508
Query: 295 GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGG 354
GPFL+ PLST+ +W+RE +TWA V Y+GD + R ++R H+ W
Sbjct: 509 HQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHE--WMH------ 560
Query: 355 KPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYS 414
P ++ +KF++LLT+YE++ D A LG + WA + VDEAHRLK++ S +K L +
Sbjct: 561 -P---QTKRLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFK 616
Query: 415 IQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPH 474
++LL+TGTP PEKF+ F+ E +E LH L P
Sbjct: 617 SNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGK-GREYGYASLHKELEPF 675
Query: 475 MLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMM 534
+LRR+K DV K++P+K E I+R+E+S +QK+YYK+ILTRN++AL+ G LNIMM
Sbjct: 676 LLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMM 735
Query: 535 DLKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
+LKKCCNH YL + Q +Q L R++G E G+R
Sbjct: 736 ELKKCCNHCYLIKPP-DNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNR 788
Score = 326 (119.8 bits), Expect = 1.9e-100, Sum P(3) = 1.9e-100
Identities = 59/101 (58%), Positives = 81/101 (80%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M +MLDIL +YL + ++R+DG+I G +R++++D FNA G+ F FLLSTR+GGL
Sbjct: 792 FSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGL 851
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINL 744
GINLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ K +N+
Sbjct: 852 GINLASADTVVIFDSDWNPQNDLQAQARAHRIGQK-KQVNI 891
Score = 250 (93.1 bits), Expect = 1.9e-92, Sum P(3) = 1.9e-92
Identities = 55/102 (53%), Positives = 70/102 (68%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ +V IYR VT+ SVEE + + AK+KM
Sbjct: 853 INLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKM 912
Query: 802 MLTHLVV-RPGMGGK-----------QANFTKQELDDILRFG 831
+L HLV+ R GK F K+EL IL+FG
Sbjct: 913 VLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKEELSAILKFG 954
Score = 71 (30.1 bits), Expect = 1.9e-100, Sum P(3) = 1.9e-100
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 119 HNINDEELEKKYYRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWED 174
+N E + + +Y I E +IA+ N K+ G Y KW+ LPY + +WED
Sbjct: 356 YNCQQELTDDLHKQYQIV-ERIIAHS--NQKSAA-GYPDYYCKWQGLPYSECSWED 407
Score = 69 (29.3 bits), Expect = 2.7e-27, Sum P(3) = 2.7e-27
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 594 EWLIANRVI---NSKTLRDGSTIYLVKWRDLPYDKATWED 630
++ I R+I N K+ G Y KW+ LPY + +WED
Sbjct: 369 QYQIVERIIAHSNQKSAA-GYPDYYCKWQGLPYSECSWED 407
Score = 56 (24.8 bits), Expect = 7.2e-99, Sum P(3) = 7.2e-99
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 149 KTLRDGSTIYLVKWRDLPYDKATWEDEN----EDIPGLKE 184
K G YL+KW+ + TWE E +++ G+K+
Sbjct: 291 KNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKK 330
Score = 56 (24.8 bits), Expect = 3.0e-25, Sum P(2) = 3.0e-25
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 605 KTLRDGSTIYLVKWRDLPYDKATWEDEN----EDIPGLKE 640
K G YL+KW+ + TWE E +++ G+K+
Sbjct: 291 KNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKK 330
>UNIPROTKB|F1MGF2 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006338 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:DAAA02021391
EMBL:DAAA02021392 IPI:IPI00717393 UniGene:Bt.105262
Ensembl:ENSBTAT00000034967 NextBio:20866990 Uniprot:F1MGF2
Length = 1810
Score = 679 (244.1 bits), Expect = 2.6e-100, Sum P(3) = 2.6e-100
Identities = 147/354 (41%), Positives = 206/354 (58%)
Query: 236 EKQPPFLDD-TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKE 294
+KQP ++ G++L YQL G+NWL +SW + ILADEMGLGKTIQTI+FL LF E
Sbjct: 479 KKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHE 538
Query: 295 GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGG 354
GPFL+ PLST+ +W+RE +TWA V Y+GD + R ++R H+ W
Sbjct: 539 HQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHE--WMH------ 590
Query: 355 KPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYS 414
P ++ +KF++LLT+YE++ D A LG + WA + VDEAHRLK++ S +K L +
Sbjct: 591 -P---QTKRLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFK 646
Query: 415 IQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPH 474
++LL+TGTP PEKF+ F+ E +E LH L P
Sbjct: 647 SNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGK-GREYGYASLHKELEPF 705
Query: 475 MLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMM 534
+LRR+K DV K++P+K E I+R+E+S +QK+YYK+ILTRN++AL+ G LNIMM
Sbjct: 706 LLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMM 765
Query: 535 DLKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
+LKKCCNH YL + Q +Q L R++G E G+R
Sbjct: 766 ELKKCCNHCYLIKPP-DNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNR 818
Score = 326 (119.8 bits), Expect = 2.6e-100, Sum P(3) = 2.6e-100
Identities = 59/101 (58%), Positives = 81/101 (80%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M +MLDIL +YL + ++R+DG+I G +R++++D FNA G+ F FLLSTR+GGL
Sbjct: 822 FSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGL 881
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINL 744
GINLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ K +N+
Sbjct: 882 GINLASADTVVIFDSDWNPQNDLQAQARAHRIGQK-KQVNI 921
Score = 250 (93.1 bits), Expect = 2.5e-92, Sum P(3) = 2.5e-92
Identities = 55/102 (53%), Positives = 70/102 (68%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ +V IYR VT+ SVEE + + AK+KM
Sbjct: 883 INLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKM 942
Query: 802 MLTHLVV-RPGMGGK-----------QANFTKQELDDILRFG 831
+L HLV+ R GK F K+EL IL+FG
Sbjct: 943 VLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKEELSAILKFG 984
Score = 64 (27.6 bits), Expect = 2.6e-100, Sum P(3) = 2.6e-100
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 147 NSKTLRDGSTIYLVKWRDLPYDKATWED 174
N K+ G Y KW+ LPY + +WED
Sbjct: 411 NQKSAA-GYPDYYCKWQGLPYSECSWED 437
Score = 64 (27.6 bits), Expect = 9.5e-27, Sum P(3) = 9.5e-27
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 603 NSKTLRDGSTIYLVKWRDLPYDKATWED 630
N K+ G Y KW+ LPY + +WED
Sbjct: 411 NQKSAA-GYPDYYCKWQGLPYSECSWED 437
Score = 56 (24.8 bits), Expect = 1.8e-99, Sum P(3) = 1.8e-99
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 149 KTLRDGSTIYLVKWRDLPYDKATWEDEN----EDIPGLKE 184
K G YL+KW+ + TWE E +++ G+K+
Sbjct: 308 KNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKK 347
Score = 56 (24.8 bits), Expect = 3.1e-25, Sum P(2) = 3.1e-25
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 605 KTLRDGSTIYLVKWRDLPYDKATWEDEN----EDIPGLKE 640
K G YL+KW+ + TWE E +++ G+K+
Sbjct: 308 KNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKK 347
Score = 40 (19.1 bits), Expect = 2.8e-70, Sum P(3) = 2.8e-70
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 621 LPYDKATWEDENEDIPGLK 639
LP DK+ +D+ ++I +K
Sbjct: 1370 LPSDKSDEDDDKDEITSVK 1388
>UNIPROTKB|F1MLB2 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0045945 "positive regulation of transcription from RNA
polymerase III promoter" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=IEA] [GO:0030178 "negative regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
OMA:FLAYMED EMBL:DAAA02028315 EMBL:DAAA02028312 EMBL:DAAA02028313
EMBL:DAAA02028314 IPI:IPI01017729 Ensembl:ENSBTAT00000027215
Uniprot:F1MLB2
Length = 2537
Score = 673 (242.0 bits), Expect = 9.7e-100, Sum P(3) = 9.7e-100
Identities = 158/384 (41%), Positives = 216/384 (56%)
Query: 204 ELQEDED-GASGSKPRRYTPPPE-----KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGI 257
EL+ED D G R + PE +P KK E + + QL YQLEG+
Sbjct: 715 ELKEDVDEGKIREFKRIQSRHPELKRVNRPQASAWKKLELSHEYKNRN--QLREYQLEGV 772
Query: 258 NWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREF 317
NWL ++W + ILADEMGLGKTIQ+I FL ++ G GPFLV APLSTI NWEREF
Sbjct: 773 NWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVG-IHGPFLVIAPLSTITNWEREF 831
Query: 318 ETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYELIT 377
TW + + Y G R +++ +++ +D+ RG R+ KF L+T++E+I
Sbjct: 832 NTWT-EMNTIVYHGSLASRQMIQQYEMYCKDS--RG----RLIPGAYKFDALITTFEMIL 884
Query: 378 NDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXX 437
+D L IEW +++DEAHRLK+ K L +++K+LLTGTP
Sbjct: 885 SDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLL 944
Query: 438 XXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRV 497
P +F + F +F D+ EEQV++L +L P MLRRLK DV KN+ K E I+ V
Sbjct: 945 HFLEPSQFPSESEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEV 1004
Query: 498 ELSPMQKKYYKYILTRNFEALNPKGGGQ--QVSLLNIMMDLKKCCNHPYLFPAAAEE--- 552
EL+ +QKKYY+ IL +NF L+ KG G +LLN MM+L+KCCNHPYL A AEE
Sbjct: 1005 ELTNIQKKYYRAILEKNFSFLS-KGAGHTNMPNLLNTMMELRKCCNHPYLINAGAEEKIL 1063
Query: 553 ------APVQGGQYEIQALTRAAG 570
+ + +QA+ R+AG
Sbjct: 1064 TEFREACHIIPHDFHLQAMVRSAG 1087
Score = 321 (118.1 bits), Expect = 9.7e-100, Sum P(3) = 9.7e-100
Identities = 63/108 (58%), Positives = 77/108 (71%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M + LDILEDYL Y YERIDG + G++RQ +IDRF+ P + +FVFLL TR+GGL
Sbjct: 1109 FSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL 1168
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADT 749
GINL ADT II+DSDWNP ND+QA +R HRIGQ K L T ++
Sbjct: 1169 GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNS 1216
Score = 222 (83.2 bits), Expect = 2.4e-89, Sum P(3) = 2.4e-89
Identities = 51/116 (43%), Positives = 67/116 (57%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
P +D F R G INL ADT II+DSDWNP ND+QA +R HRIGQ V +Y
Sbjct: 1152 PDSDRFVFLLCTRAGGLG--INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVY 1209
Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQAN------FTKQELDDILRFG 831
R +TRNS E + A K+ L V++ M G+ N F+K+E++D+LR G
Sbjct: 1210 RLITRNSYEREMFDKASLKLGLDKAVLQ-SMSGRDGNITGIQQFSKKEIEDLLRKG 1264
Score = 77 (32.2 bits), Expect = 9.7e-100, Sum P(3) = 9.7e-100
Identities = 24/73 (32%), Positives = 45/73 (61%)
Query: 112 RMARLNRHNINDEELEKKYYRYGIKPEWLIANRVIN-SKTL-RD-GSTI--YLVKWRDLP 166
+MA++ RH +++E E P+++ +R+++ S ++ +D G + YLVKW LP
Sbjct: 657 KMAQM-RHFFHEDE-EP------FNPDYVEVDRILDESHSIDKDNGEPVIYYLVKWCSLP 708
Query: 167 YDKATWEDENEDI 179
Y+ +TWE + ED+
Sbjct: 709 YEDSTWELK-EDV 720
Score = 76 (31.8 bits), Expect = 7.7e-26, Sum P(4) = 7.7e-26
Identities = 18/48 (37%), Positives = 33/48 (68%)
Query: 593 PEWLIANRVIN-SKTL-RD-GSTI--YLVKWRDLPYDKATWEDENEDI 635
P+++ +R+++ S ++ +D G + YLVKW LPY+ +TWE + ED+
Sbjct: 674 PDYVEVDRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELK-EDV 720
Score = 47 (21.6 bits), Expect = 7.7e-26, Sum P(4) = 7.7e-26
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 444 KFNDLTSFQAEFADISKEEQVKRLHDLL 471
K+ + + E+A IS+ E+ KR+H L
Sbjct: 624 KYKNYSYLHCEWATISQLEKDKRIHQKL 651
Score = 46 (21.3 bits), Expect = 7.7e-26, Sum P(4) = 7.7e-26
Identities = 16/58 (27%), Positives = 25/58 (43%)
Query: 206 QEDEDGASG----SKPRRYTPPPEKPT-TDLRKKYEKQPPFLDDTGMQLHAYQLEGIN 258
Q ++DG G S PPPE+ T+L K+ P + LH Y + ++
Sbjct: 48 QMNQDGGGGDVANSSANDLVPPPEETAPTELPKESTAPAP----ESLTLHDYTTQPVS 101
>UNIPROTKB|F1S8J5 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0045945 "positive regulation of transcription from RNA
polymerase III promoter" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=IEA] [GO:0030178 "negative regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
OMA:FLAYMED EMBL:FP340603 Ensembl:ENSSSCT00000002379
ArrayExpress:F1S8J5 Uniprot:F1S8J5
Length = 2569
Score = 673 (242.0 bits), Expect = 1.0e-99, Sum P(3) = 1.0e-99
Identities = 158/384 (41%), Positives = 216/384 (56%)
Query: 204 ELQEDED-GASGSKPRRYTPPPE-----KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGI 257
EL+ED D G R + PE +P KK E + + QL YQLEG+
Sbjct: 762 ELKEDVDEGKIREFKRIQSRHPELKRVNRPQASAWKKLELSHEYKNRN--QLREYQLEGV 819
Query: 258 NWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREF 317
NWL ++W + ILADEMGLGKTIQ+I FL ++ G GPFLV APLSTI NWEREF
Sbjct: 820 NWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVG-IHGPFLVIAPLSTITNWEREF 878
Query: 318 ETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYELIT 377
TW + + Y G R +++ +++ +D+ RG R+ KF L+T++E+I
Sbjct: 879 NTWT-EMNTIVYHGSLASRQMIQQYEMYCKDS--RG----RLIPGAYKFDALITTFEMIL 931
Query: 378 NDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXX 437
+D L IEW +++DEAHRLK+ K L +++K+LLTGTP
Sbjct: 932 SDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLL 991
Query: 438 XXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRV 497
P +F + F +F D+ EEQV++L +L P MLRRLK DV KN+ K E I+ V
Sbjct: 992 HFLEPSQFPSESEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEV 1051
Query: 498 ELSPMQKKYYKYILTRNFEALNPKGGGQ--QVSLLNIMMDLKKCCNHPYLFPAAAEE--- 552
EL+ +QKKYY+ IL +NF L+ KG G +LLN MM+L+KCCNHPYL A AEE
Sbjct: 1052 ELTNIQKKYYRAILEKNFSFLS-KGAGHTNMPNLLNTMMELRKCCNHPYLINAGAEEKIL 1110
Query: 553 ------APVQGGQYEIQALTRAAG 570
+ + +QA+ R+AG
Sbjct: 1111 TEFREACHIIPHDFHLQAMVRSAG 1134
Score = 321 (118.1 bits), Expect = 1.0e-99, Sum P(3) = 1.0e-99
Identities = 63/108 (58%), Positives = 77/108 (71%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M + LDILEDYL Y YERIDG + G++RQ +IDRF+ P + +FVFLL TR+GGL
Sbjct: 1156 FSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL 1215
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADT 749
GINL ADT II+DSDWNP ND+QA +R HRIGQ K L T ++
Sbjct: 1216 GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNS 1263
Score = 222 (83.2 bits), Expect = 2.6e-89, Sum P(3) = 2.6e-89
Identities = 51/116 (43%), Positives = 67/116 (57%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
P +D F R G INL ADT II+DSDWNP ND+QA +R HRIGQ V +Y
Sbjct: 1199 PDSDRFVFLLCTRAGGLG--INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVY 1256
Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQAN------FTKQELDDILRFG 831
R +TRNS E + A K+ L V++ M G+ N F+K+E++D+LR G
Sbjct: 1257 RLITRNSYEREMFDKASLKLGLDKAVLQ-SMSGRDGNITGIQQFSKKEIEDLLRKG 1311
Score = 77 (32.2 bits), Expect = 1.0e-99, Sum P(3) = 1.0e-99
Identities = 24/73 (32%), Positives = 45/73 (61%)
Query: 112 RMARLNRHNINDEELEKKYYRYGIKPEWLIANRVIN-SKTL-RD-GSTI--YLVKWRDLP 166
+MA++ RH +++E E P+++ +R+++ S ++ +D G + YLVKW LP
Sbjct: 704 KMAQM-RHFFHEDE-EP------FNPDYVEVDRILDESHSIDKDNGEPVIYYLVKWCSLP 755
Query: 167 YDKATWEDENEDI 179
Y+ +TWE + ED+
Sbjct: 756 YEDSTWELK-EDV 767
Score = 76 (31.8 bits), Expect = 5.8e-26, Sum P(3) = 5.8e-26
Identities = 18/48 (37%), Positives = 33/48 (68%)
Query: 593 PEWLIANRVIN-SKTL-RD-GSTI--YLVKWRDLPYDKATWEDENEDI 635
P+++ +R+++ S ++ +D G + YLVKW LPY+ +TWE + ED+
Sbjct: 721 PDYVEVDRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELK-EDV 767
Score = 47 (21.6 bits), Expect = 5.8e-26, Sum P(3) = 5.8e-26
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 444 KFNDLTSFQAEFADISKEEQVKRLHDLL 471
K+ + + E+A IS+ E+ KR+H L
Sbjct: 671 KYKNYSYLHCEWATISQLEKDKRIHQKL 698
>UNIPROTKB|E2QUS7 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:FLAYMED EMBL:AAEX03009852
Ensembl:ENSCAFT00000009065 Uniprot:E2QUS7
Length = 2586
Score = 673 (242.0 bits), Expect = 1.1e-99, Sum P(3) = 1.1e-99
Identities = 158/384 (41%), Positives = 216/384 (56%)
Query: 204 ELQEDED-GASGSKPRRYTPPPE-----KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGI 257
EL+ED D G R + PE +P KK E + + QL YQLEG+
Sbjct: 762 ELKEDVDEGKIREFKRIQSRHPELKRVNRPQASAWKKLELSHEYKNRN--QLREYQLEGV 819
Query: 258 NWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREF 317
NWL ++W + ILADEMGLGKTIQ+I FL ++ G GPFLV APLSTI NWEREF
Sbjct: 820 NWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVG-IHGPFLVIAPLSTITNWEREF 878
Query: 318 ETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYELIT 377
TW + + Y G R +++ +++ +D+ RG R+ KF L+T++E+I
Sbjct: 879 NTWT-EMNTIVYHGSLASRQMIQQYEMYCKDS--RG----RLIPGAYKFDALITTFEMIL 931
Query: 378 NDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXX 437
+D L IEW +++DEAHRLK+ K L +++K+LLTGTP
Sbjct: 932 SDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLL 991
Query: 438 XXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRV 497
P +F + F +F D+ EEQV++L +L P MLRRLK DV KN+ K E I+ V
Sbjct: 992 HFLEPSQFPSESEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEV 1051
Query: 498 ELSPMQKKYYKYILTRNFEALNPKGGGQ--QVSLLNIMMDLKKCCNHPYLFPAAAEE--- 552
EL+ +QKKYY+ IL +NF L+ KG G +LLN MM+L+KCCNHPYL A AEE
Sbjct: 1052 ELTNIQKKYYRAILEKNFSFLS-KGAGHTNMPNLLNTMMELRKCCNHPYLINAGAEEKIL 1110
Query: 553 ------APVQGGQYEIQALTRAAG 570
+ + +QA+ R+AG
Sbjct: 1111 TEFREACHIIPHDFHLQAMVRSAG 1134
Score = 321 (118.1 bits), Expect = 1.1e-99, Sum P(3) = 1.1e-99
Identities = 63/108 (58%), Positives = 77/108 (71%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M + LDILEDYL Y YERIDG + G++RQ +IDRF+ P + +FVFLL TR+GGL
Sbjct: 1156 FSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL 1215
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADT 749
GINL ADT II+DSDWNP ND+QA +R HRIGQ K L T ++
Sbjct: 1216 GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNS 1263
Score = 222 (83.2 bits), Expect = 2.7e-89, Sum P(3) = 2.7e-89
Identities = 51/116 (43%), Positives = 67/116 (57%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
P +D F R G INL ADT II+DSDWNP ND+QA +R HRIGQ V +Y
Sbjct: 1199 PDSDRFVFLLCTRAGGLG--INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVY 1256
Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQAN------FTKQELDDILRFG 831
R +TRNS E + A K+ L V++ M G+ N F+K+E++D+LR G
Sbjct: 1257 RLITRNSYEREMFDKASLKLGLDKAVLQ-SMSGRDGNITGIQQFSKKEIEDLLRKG 1311
Score = 77 (32.2 bits), Expect = 1.1e-99, Sum P(3) = 1.1e-99
Identities = 24/73 (32%), Positives = 45/73 (61%)
Query: 112 RMARLNRHNINDEELEKKYYRYGIKPEWLIANRVIN-SKTL-RD-GSTI--YLVKWRDLP 166
+MA++ RH +++E E P+++ +R+++ S ++ +D G + YLVKW LP
Sbjct: 704 KMAQM-RHFFHEDE-EP------FNPDYVEVDRILDESHSIDKDNGEPVIYYLVKWCSLP 755
Query: 167 YDKATWEDENEDI 179
Y+ +TWE + ED+
Sbjct: 756 YEDSTWELK-EDV 767
Score = 76 (31.8 bits), Expect = 6.0e-26, Sum P(3) = 6.0e-26
Identities = 18/48 (37%), Positives = 33/48 (68%)
Query: 593 PEWLIANRVIN-SKTL-RD-GSTI--YLVKWRDLPYDKATWEDENEDI 635
P+++ +R+++ S ++ +D G + YLVKW LPY+ +TWE + ED+
Sbjct: 721 PDYVEVDRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELK-EDV 767
Score = 47 (21.6 bits), Expect = 6.0e-26, Sum P(3) = 6.0e-26
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 444 KFNDLTSFQAEFADISKEEQVKRLHDLL 471
K+ + + E+A IS+ E+ KR+H L
Sbjct: 671 KYKNYSYLHCEWATISQLEKDKRIHQKL 698
>UNIPROTKB|E2QUR1 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AAEX03009852
Ensembl:ENSCAFT00000009072 Uniprot:E2QUR1
Length = 2200
Score = 667 (239.9 bits), Expect = 2.1e-99, Sum P(3) = 2.1e-99
Identities = 156/383 (40%), Positives = 216/383 (56%)
Query: 204 ELQEDED-GASGSKPRRYTPPPE-----KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGI 257
EL+ED D G R + PE +P KK E + + QL YQLEG+
Sbjct: 379 ELKEDVDEGKIREFKRIQSRHPELKRVNRPQASAWKKLELSHEYKNRN--QLREYQLEGV 436
Query: 258 NWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREF 317
NWL ++W + ILADEMGLGKTIQ+I FL ++ G GPFLV APLSTI NWEREF
Sbjct: 437 NWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVG-IHGPFLVIAPLSTITNWEREF 495
Query: 318 ETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYELIT 377
TW + + Y G R +++ +++ +D+ RG R+ KF L+T++E+I
Sbjct: 496 NTWT-EMNTIVYHGSLASRQMIQQYEMYCKDS--RG----RLIPGAYKFDALITTFEMIL 548
Query: 378 NDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXX 437
+D L IEW +++DEAHRLK+ K L +++K+LLTGTP
Sbjct: 549 SDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLL 608
Query: 438 XXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRV 497
P +F + F +F D+ EEQV++L +L P MLRRLK DV KN+ K E I+ V
Sbjct: 609 HFLEPSQFPSESEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEV 668
Query: 498 ELSPMQKKYYKYILTRNFEALNPKGGGQ--QVSLLNIMMDLKKCCNHPYLFPAAAEEAPV 555
EL+ +QKKYY+ IL +NF L+ KG G +LLN MM+L+KCCNHPYL A E+
Sbjct: 669 ELTNIQKKYYRAILEKNFSFLS-KGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILT 727
Query: 556 QGGQ--------YEIQALTRAAG 570
+ + + +QA+ R+AG
Sbjct: 728 EFREACHIIPHDFHLQAMVRSAG 750
Score = 321 (118.1 bits), Expect = 2.1e-99, Sum P(3) = 2.1e-99
Identities = 63/108 (58%), Positives = 77/108 (71%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M + LDILEDYL Y YERIDG + G++RQ +IDRF+ P + +FVFLL TR+GGL
Sbjct: 772 FSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL 831
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADT 749
GINL ADT II+DSDWNP ND+QA +R HRIGQ K L T ++
Sbjct: 832 GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNS 879
Score = 222 (83.2 bits), Expect = 5.3e-89, Sum P(3) = 5.3e-89
Identities = 51/116 (43%), Positives = 67/116 (57%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
P +D F R G INL ADT II+DSDWNP ND+QA +R HRIGQ V +Y
Sbjct: 815 PDSDRFVFLLCTRAGGLG--INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVY 872
Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQAN------FTKQELDDILRFG 831
R +TRNS E + A K+ L V++ M G+ N F+K+E++D+LR G
Sbjct: 873 RLITRNSYEREMFDKASLKLGLDKAVLQ-SMSGRDGNITGIQQFSKKEIEDLLRKG 927
Score = 77 (32.2 bits), Expect = 2.1e-99, Sum P(3) = 2.1e-99
Identities = 24/73 (32%), Positives = 45/73 (61%)
Query: 112 RMARLNRHNINDEELEKKYYRYGIKPEWLIANRVIN-SKTL-RD-GSTI--YLVKWRDLP 166
+MA++ RH +++E E P+++ +R+++ S ++ +D G + YLVKW LP
Sbjct: 321 KMAQM-RHFFHEDE-EP------FNPDYVEVDRILDESHSIDKDNGEPVIYYLVKWCSLP 372
Query: 167 YDKATWEDENEDI 179
Y+ +TWE + ED+
Sbjct: 373 YEDSTWELK-EDV 384
Score = 76 (31.8 bits), Expect = 3.3e-26, Sum P(3) = 3.3e-26
Identities = 18/48 (37%), Positives = 33/48 (68%)
Query: 593 PEWLIANRVIN-SKTL-RD-GSTI--YLVKWRDLPYDKATWEDENEDI 635
P+++ +R+++ S ++ +D G + YLVKW LPY+ +TWE + ED+
Sbjct: 338 PDYVEVDRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELK-EDV 384
Score = 47 (21.6 bits), Expect = 3.3e-26, Sum P(3) = 3.3e-26
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 444 KFNDLTSFQAEFADISKEEQVKRLHDLL 471
K+ + + E+A IS+ E+ KR+H L
Sbjct: 288 KYKNYSYLHCEWATISQLEKDKRIHQKL 315
>UNIPROTKB|F1RN66 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:CU570924 EMBL:CU928692 Ensembl:ENSSSCT00000015489
Uniprot:F1RN66
Length = 1794
Score = 679 (244.1 bits), Expect = 2.2e-99, Sum P(3) = 2.2e-99
Identities = 147/354 (41%), Positives = 206/354 (58%)
Query: 236 EKQPPFLDD-TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKE 294
+KQP ++ G++L YQL G+NWL +SW + ILADEMGLGKTIQTI+FL LF E
Sbjct: 461 KKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHE 520
Query: 295 GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGG 354
GPFL+ PLST+ +W+RE +TWA V Y+GD + R ++R H+ W
Sbjct: 521 HQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHE--WMH------ 572
Query: 355 KPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYS 414
P ++ +KF++LLT+YE++ D A LG + WA + VDEAHRLK++ S +K L +
Sbjct: 573 -P---QTKRLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFK 628
Query: 415 IQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPH 474
++LL+TGTP PEKF+ F+ E +E LH L P
Sbjct: 629 SNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGK-GREYGYASLHKELEPF 687
Query: 475 MLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMM 534
+LRR+K DV K++P+K E I+R+E+S +QK+YYK+ILTRN++AL+ G LNIMM
Sbjct: 688 LLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMM 747
Query: 535 DLKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
+LKKCCNH YL + Q +Q L R++G E G+R
Sbjct: 748 ELKKCCNHCYLIKPP-DNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNR 800
Score = 310 (114.2 bits), Expect = 2.2e-99, Sum P(3) = 2.2e-99
Identities = 61/110 (55%), Positives = 81/110 (73%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M +MLDIL +YL + ++R+DG+I G +R++++D FNA G+ F FLLSTR+GGL
Sbjct: 804 FSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGL 863
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIG---QQNKYINLATADTV 750
GINLA+ADTV+I+DSDWNP ND+QA +RAHR G Q N Y L T +V
Sbjct: 864 GINLASADTVVIFDSDWNPQNDLQAQARAHRHGYLSQVNIY-RLVTKGSV 912
Score = 235 (87.8 bits), Expect = 1.7e-91, Sum P(3) = 1.7e-91
Identities = 53/102 (51%), Positives = 68/102 (66%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLA+ADTV+I+DSDWNP ND+QA +RAHR G ++V IYR VT+ SVEE + + AK+KM
Sbjct: 865 INLASADTVVIFDSDWNPQNDLQAQARAHRHGYLSQVNIYRLVTKGSVEEDILERAKKKM 924
Query: 802 MLTHLVV-RPGMGGK-----------QANFTKQELDDILRFG 831
+L HLV+ R GK F K+EL IL+FG
Sbjct: 925 VLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKEELSAILKFG 966
Score = 71 (30.1 bits), Expect = 2.2e-99, Sum P(3) = 2.2e-99
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 119 HNINDEELEKKYYRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWED 174
+N E + + +Y I E +IA+ N K+ G Y KW+ LPY + +WED
Sbjct: 368 YNCQQELTDDLHKQYQIV-ERIIAHS--NQKSAA-GYPDYYCKWQGLPYSECSWED 419
Score = 69 (29.3 bits), Expect = 1.5e-25, Sum P(3) = 1.5e-25
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 594 EWLIANRVI---NSKTLRDGSTIYLVKWRDLPYDKATWED 630
++ I R+I N K+ G Y KW+ LPY + +WED
Sbjct: 381 QYQIVERIIAHSNQKSAA-GYPDYYCKWQGLPYSECSWED 419
Score = 56 (24.8 bits), Expect = 8.2e-98, Sum P(3) = 8.2e-98
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 149 KTLRDGSTIYLVKWRDLPYDKATWEDEN----EDIPGLKE 184
K G YL+KW+ + TWE E +++ G+K+
Sbjct: 303 KNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKK 342
Score = 56 (24.8 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 605 KTLRDGSTIYLVKWRDLPYDKATWEDEN----EDIPGLKE 640
K G YL+KW+ + TWE E +++ G+K+
Sbjct: 303 KNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKK 342
>UNIPROTKB|I3L6N4 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:CU570924 EMBL:CU928692 Ensembl:ENSSSCT00000022643
Uniprot:I3L6N4
Length = 1798
Score = 679 (244.1 bits), Expect = 2.2e-99, Sum P(3) = 2.2e-99
Identities = 147/354 (41%), Positives = 206/354 (58%)
Query: 236 EKQPPFLDD-TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKE 294
+KQP ++ G++L YQL G+NWL +SW + ILADEMGLGKTIQTI+FL LF E
Sbjct: 461 KKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHE 520
Query: 295 GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGG 354
GPFL+ PLST+ +W+RE +TWA V Y+GD + R ++R H+ W
Sbjct: 521 HQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHE--WMH------ 572
Query: 355 KPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYS 414
P ++ +KF++LLT+YE++ D A LG + WA + VDEAHRLK++ S +K L +
Sbjct: 573 -P---QTKRLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFK 628
Query: 415 IQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPH 474
++LL+TGTP PEKF+ F+ E +E LH L P
Sbjct: 629 SNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGK-GREYGYASLHKELEPF 687
Query: 475 MLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMM 534
+LRR+K DV K++P+K E I+R+E+S +QK+YYK+ILTRN++AL+ G LNIMM
Sbjct: 688 LLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMM 747
Query: 535 DLKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
+LKKCCNH YL + Q +Q L R++G E G+R
Sbjct: 748 ELKKCCNHCYLIKPP-DNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNR 800
Score = 310 (114.2 bits), Expect = 2.2e-99, Sum P(3) = 2.2e-99
Identities = 61/110 (55%), Positives = 81/110 (73%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M +MLDIL +YL + ++R+DG+I G +R++++D FNA G+ F FLLSTR+GGL
Sbjct: 804 FSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGL 863
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIG---QQNKYINLATADTV 750
GINLA+ADTV+I+DSDWNP ND+QA +RAHR G Q N Y L T +V
Sbjct: 864 GINLASADTVVIFDSDWNPQNDLQAQARAHRHGYLSQVNIY-RLVTKGSV 912
Score = 235 (87.8 bits), Expect = 1.7e-91, Sum P(3) = 1.7e-91
Identities = 53/102 (51%), Positives = 68/102 (66%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLA+ADTV+I+DSDWNP ND+QA +RAHR G ++V IYR VT+ SVEE + + AK+KM
Sbjct: 865 INLASADTVVIFDSDWNPQNDLQAQARAHRHGYLSQVNIYRLVTKGSVEEDILERAKKKM 924
Query: 802 MLTHLVV-RPGMGGK-----------QANFTKQELDDILRFG 831
+L HLV+ R GK F K+EL IL+FG
Sbjct: 925 VLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKEELSAILKFG 966
Score = 71 (30.1 bits), Expect = 2.2e-99, Sum P(3) = 2.2e-99
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 119 HNINDEELEKKYYRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWED 174
+N E + + +Y I E +IA+ N K+ G Y KW+ LPY + +WED
Sbjct: 368 YNCQQELTDDLHKQYQIV-ERIIAHS--NQKSAA-GYPDYYCKWQGLPYSECSWED 419
Score = 69 (29.3 bits), Expect = 1.5e-25, Sum P(3) = 1.5e-25
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 594 EWLIANRVI---NSKTLRDGSTIYLVKWRDLPYDKATWED 630
++ I R+I N K+ G Y KW+ LPY + +WED
Sbjct: 381 QYQIVERIIAHSNQKSAA-GYPDYYCKWQGLPYSECSWED 419
Score = 56 (24.8 bits), Expect = 8.4e-98, Sum P(3) = 8.4e-98
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 149 KTLRDGSTIYLVKWRDLPYDKATWEDEN----EDIPGLKE 184
K G YL+KW+ + TWE E +++ G+K+
Sbjct: 303 KNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKK 342
Score = 56 (24.8 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 605 KTLRDGSTIYLVKWRDLPYDKATWEDEN----EDIPGLKE 640
K G YL+KW+ + TWE E +++ G+K+
Sbjct: 303 KNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKK 342
>UNIPROTKB|I3LIS2 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006338 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:CU570924
EMBL:CU928692 Ensembl:ENSSSCT00000032432 Uniprot:I3LIS2
Length = 1799
Score = 679 (244.1 bits), Expect = 2.2e-99, Sum P(3) = 2.2e-99
Identities = 147/354 (41%), Positives = 206/354 (58%)
Query: 236 EKQPPFLDD-TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKE 294
+KQP ++ G++L YQL G+NWL +SW + ILADEMGLGKTIQTI+FL LF E
Sbjct: 462 KKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHE 521
Query: 295 GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGG 354
GPFL+ PLST+ +W+RE +TWA V Y+GD + R ++R H+ W
Sbjct: 522 HQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHE--WMH------ 573
Query: 355 KPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYS 414
P ++ +KF++LLT+YE++ D A LG + WA + VDEAHRLK++ S +K L +
Sbjct: 574 -P---QTKRLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFK 629
Query: 415 IQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPH 474
++LL+TGTP PEKF+ F+ E +E LH L P
Sbjct: 630 SNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGK-GREYGYASLHKELEPF 688
Query: 475 MLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMM 534
+LRR+K DV K++P+K E I+R+E+S +QK+YYK+ILTRN++AL+ G LNIMM
Sbjct: 689 LLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMM 748
Query: 535 DLKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
+LKKCCNH YL + Q +Q L R++G E G+R
Sbjct: 749 ELKKCCNHCYLIKPP-DNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNR 801
Score = 310 (114.2 bits), Expect = 2.2e-99, Sum P(3) = 2.2e-99
Identities = 61/110 (55%), Positives = 81/110 (73%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M +MLDIL +YL + ++R+DG+I G +R++++D FNA G+ F FLLSTR+GGL
Sbjct: 805 FSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGL 864
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIG---QQNKYINLATADTV 750
GINLA+ADTV+I+DSDWNP ND+QA +RAHR G Q N Y L T +V
Sbjct: 865 GINLASADTVVIFDSDWNPQNDLQAQARAHRHGYLSQVNIY-RLVTKGSV 913
Score = 235 (87.8 bits), Expect = 1.7e-91, Sum P(3) = 1.7e-91
Identities = 53/102 (51%), Positives = 68/102 (66%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLA+ADTV+I+DSDWNP ND+QA +RAHR G ++V IYR VT+ SVEE + + AK+KM
Sbjct: 866 INLASADTVVIFDSDWNPQNDLQAQARAHRHGYLSQVNIYRLVTKGSVEEDILERAKKKM 925
Query: 802 MLTHLVV-RPGMGGK-----------QANFTKQELDDILRFG 831
+L HLV+ R GK F K+EL IL+FG
Sbjct: 926 VLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKEELSAILKFG 967
Score = 71 (30.1 bits), Expect = 2.2e-99, Sum P(3) = 2.2e-99
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 119 HNINDEELEKKYYRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWED 174
+N E + + +Y I E +IA+ N K+ G Y KW+ LPY + +WED
Sbjct: 369 YNCQQELTDDLHKQYQIV-ERIIAHS--NQKSAA-GYPDYYCKWQGLPYSECSWED 420
Score = 69 (29.3 bits), Expect = 1.5e-25, Sum P(3) = 1.5e-25
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 594 EWLIANRVI---NSKTLRDGSTIYLVKWRDLPYDKATWED 630
++ I R+I N K+ G Y KW+ LPY + +WED
Sbjct: 382 QYQIVERIIAHSNQKSAA-GYPDYYCKWQGLPYSECSWED 420
Score = 56 (24.8 bits), Expect = 8.4e-98, Sum P(3) = 8.4e-98
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 149 KTLRDGSTIYLVKWRDLPYDKATWEDEN----EDIPGLKE 184
K G YL+KW+ + TWE E +++ G+K+
Sbjct: 304 KNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKK 343
Score = 56 (24.8 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 605 KTLRDGSTIYLVKWRDLPYDKATWEDEN----EDIPGLKE 640
K G YL+KW+ + TWE E +++ G+K+
Sbjct: 304 KNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKK 343
>RGD|620696 [details] [associations]
symbol:Chd8 "chromodomain helicase DNA binding protein 8"
species:10116 "Rattus norvegicus" [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0002039 "p53 binding"
evidence=ISO;ISS] [GO:0003677 "DNA binding" evidence=ISO;ISS]
[GO:0003678 "DNA helicase activity" evidence=ISO;ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO;IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISO;ISS] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISO;IDA] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO;ISS]
[GO:0042393 "histone binding" evidence=ISO;ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO;ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=ISO;ISS]
[GO:0043234 "protein complex" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;ISS] [GO:0045945 "positive regulation of
transcription from RNA polymerase III promoter" evidence=ISO;ISS]
[GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=ISO;IDA] [GO:0070016 "armadillo repeat domain binding"
evidence=IPI] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 RGD:620696 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0006351 GO:GO:0035064 GO:GO:0008013
GO:GO:0045945 GO:GO:0030178 GO:GO:0060070 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
GO:GO:0002039 EMBL:CH474040 InterPro:IPR023780 PROSITE:PS00598
GO:GO:0008094 HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077
HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC CTD:57680 KO:K04494
EMBL:AF169825 IPI:IPI00201110 IPI:IPI00923717 RefSeq:NP_075222.2
UniGene:Rn.98337 STRING:Q9JIX5 PhosphoSite:Q9JIX5 PRIDE:Q9JIX5
Ensembl:ENSRNOT00000022593 GeneID:65027 KEGG:rno:65027
UCSC:RGD:620696 NextBio:613802 Genevestigator:Q9JIX5 Uniprot:Q9JIX5
Length = 2581
Score = 669 (240.6 bits), Expect = 3.5e-99, Sum P(3) = 3.5e-99
Identities = 156/383 (40%), Positives = 218/383 (56%)
Query: 204 ELQEDED-GASGSKPRRYTPPPE-----KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGI 257
EL+ED D G R + PE +P + KK E + + QL YQLEG+
Sbjct: 762 ELKEDVDEGKIREFKRIQSRHPELKRVNRPQANAWKKLELSHEYKNRN--QLREYQLEGV 819
Query: 258 NWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREF 317
NWL ++W + ILADEMGLGKTIQ+I FL ++ G GPFLV APLSTI NWEREF
Sbjct: 820 NWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVG-IHGPFLVIAPLSTITNWEREF 878
Query: 318 ETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYELIT 377
TW + + Y G R +++ +++ +D+ RG R+ KF L+T++E+I
Sbjct: 879 NTWT-EMNTIVYHGSLASRQMIQQYEMYCKDS--RG----RLIPGAYKFDALITTFEMIL 931
Query: 378 NDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXX 437
+D L IEW +++DEAHRLK+ K L +++K+LLTGTP
Sbjct: 932 SDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLL 991
Query: 438 XXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRV 497
P +F + F +F D+ EEQV++L +L P MLRRLK DV KN+ K E I+ V
Sbjct: 992 HFLEPSQFPSESEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEV 1051
Query: 498 ELSPMQKKYYKYILTRNFEALNPKGGGQ--QVSLLNIMMDLKKCCNHPYLFPAAAEEAPV 555
EL+ +QKKYY+ IL +NF L+ KG G +LLN MM+L+KCCNHPYL A E+ +
Sbjct: 1052 ELTNIQKKYYRAILEKNFSFLS-KGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILM 1110
Query: 556 QGGQ--------YEIQALTRAAG 570
+ + + +QA+ R+AG
Sbjct: 1111 EFREACHIIPQDFHLQAMVRSAG 1133
Score = 321 (118.1 bits), Expect = 3.5e-99, Sum P(3) = 3.5e-99
Identities = 63/108 (58%), Positives = 77/108 (71%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M + LDILEDYL Y YERIDG + G++RQ +IDRF+ P + +FVFLL TR+GGL
Sbjct: 1155 FSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL 1214
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADT 749
GINL ADT II+DSDWNP ND+QA +R HRIGQ K L T ++
Sbjct: 1215 GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNS 1262
Score = 222 (83.2 bits), Expect = 9.0e-89, Sum P(3) = 9.0e-89
Identities = 51/116 (43%), Positives = 67/116 (57%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
P +D F R G INL ADT II+DSDWNP ND+QA +R HRIGQ V +Y
Sbjct: 1198 PDSDRFVFLLCTRAGGLG--INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVY 1255
Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQAN------FTKQELDDILRFG 831
R +TRNS E + A K+ L V++ M G+ N F+K+E++D+LR G
Sbjct: 1256 RLITRNSYEREMFDKASLKLGLDKAVLQ-SMSGRDGNITGIQQFSKKEIEDLLRKG 1310
Score = 76 (31.8 bits), Expect = 3.5e-99, Sum P(3) = 3.5e-99
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 112 RMARLNRHNINDEELEKKYYRYGIKPEWLIANRVINSKTLRD---GSTI--YLVKWRDLP 166
+MA++ RH +++E E P+++ +R+++ D G + YLVKW LP
Sbjct: 704 KMAQM-RHFFHEDE-EP------FNPDYVEVDRILDESHSVDKDNGEPVIYYLVKWCSLP 755
Query: 167 YDKATWEDENEDI 179
Y+ +TWE + ED+
Sbjct: 756 YEDSTWELK-EDV 767
Score = 75 (31.5 bits), Expect = 7.5e-26, Sum P(3) = 7.5e-26
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 593 PEWLIANRVINSKTLRD---GSTI--YLVKWRDLPYDKATWEDENEDI 635
P+++ +R+++ D G + YLVKW LPY+ +TWE + ED+
Sbjct: 721 PDYVEVDRILDESHSVDKDNGEPVIYYLVKWCSLPYEDSTWELK-EDV 767
Score = 47 (21.6 bits), Expect = 7.5e-26, Sum P(3) = 7.5e-26
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 444 KFNDLTSFQAEFADISKEEQVKRLHDLL 471
K+ + + E+A IS+ E+ KR+H L
Sbjct: 671 KYKNYSYLHCEWATISQLEKDKRIHQKL 698
>MGI|MGI:1915022 [details] [associations]
symbol:Chd8 "chromodomain helicase DNA binding protein 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0002039 "p53 binding" evidence=IPI] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=ISO;IDA] [GO:0003678 "DNA helicase activity" evidence=ISO]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISO] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
evidence=ISO] [GO:0035064 "methylated histone residue binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP;IDA] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0045945 "positive regulation of transcription
from RNA polymerase III promoter" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0070016 "armadillo repeat domain binding" evidence=ISO]
[GO:0071339 "MLL1 complex" evidence=ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 MGI:MGI:1915022 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0006351 GO:GO:0035064 GO:GO:0008013
GO:GO:0045945 GO:GO:0030178 GO:GO:0060070 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 GO:GO:0008094
HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077
HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC CTD:57680 KO:K04494
OMA:FLAYMED EMBL:DQ190419 EMBL:AY863219 EMBL:AK129393 EMBL:AK160299
IPI:IPI00858099 IPI:IPI00923681 RefSeq:NP_963999.2
UniGene:Mm.289934 ProteinModelPortal:Q09XV5 SMR:Q09XV5
IntAct:Q09XV5 STRING:Q09XV5 PhosphoSite:Q09XV5 PaxDb:Q09XV5
PRIDE:Q09XV5 Ensembl:ENSMUST00000089752 GeneID:67772 KEGG:mmu:67772
UCSC:uc007tot.1 UCSC:uc007tov.1 InParanoid:Q09XV5 ChiTaRS:CHD8
NextBio:325525 Bgee:Q09XV5 Genevestigator:Q09XV5 Uniprot:Q09XV5
Length = 2582
Score = 669 (240.6 bits), Expect = 3.6e-99, Sum P(3) = 3.6e-99
Identities = 156/383 (40%), Positives = 218/383 (56%)
Query: 204 ELQEDED-GASGSKPRRYTPPPE-----KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGI 257
EL+ED D G R + PE +P + KK E + + QL YQLEG+
Sbjct: 764 ELKEDVDEGKIREFKRIQSRHPELRRVNRPQANAWKKLELSHEYKNRN--QLREYQLEGV 821
Query: 258 NWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREF 317
NWL ++W + ILADEMGLGKTIQ+I FL ++ G GPFLV APLSTI NWEREF
Sbjct: 822 NWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVG-IHGPFLVIAPLSTITNWEREF 880
Query: 318 ETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYELIT 377
TW + + Y G R +++ +++ +D+ RG R+ KF L+T++E+I
Sbjct: 881 NTWT-EMNTIVYHGSLASRQMIQQYEMYCKDS--RG----RLIPGAYKFDALITTFEMIL 933
Query: 378 NDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXX 437
+D L IEW +++DEAHRLK+ K L +++K+LLTGTP
Sbjct: 934 SDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLL 993
Query: 438 XXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRV 497
P +F + F +F D+ EEQV++L +L P MLRRLK DV KN+ K E I+ V
Sbjct: 994 HFLEPSQFPSESEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEV 1053
Query: 498 ELSPMQKKYYKYILTRNFEALNPKGGGQ--QVSLLNIMMDLKKCCNHPYLFPAAAEEAPV 555
EL+ +QKKYY+ IL +NF L+ KG G +LLN MM+L+KCCNHPYL A E+ +
Sbjct: 1054 ELTNIQKKYYRAILEKNFSFLS-KGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILM 1112
Query: 556 QGGQ--------YEIQALTRAAG 570
+ + + +QA+ R+AG
Sbjct: 1113 EFREACHIIPQDFHLQAMVRSAG 1135
Score = 321 (118.1 bits), Expect = 3.6e-99, Sum P(3) = 3.6e-99
Identities = 63/108 (58%), Positives = 77/108 (71%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M + LDILEDYL Y YERIDG + G++RQ +IDRF+ P + +FVFLL TR+GGL
Sbjct: 1157 FSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL 1216
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADT 749
GINL ADT II+DSDWNP ND+QA +R HRIGQ K L T ++
Sbjct: 1217 GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNS 1264
Score = 222 (83.2 bits), Expect = 9.0e-89, Sum P(3) = 9.0e-89
Identities = 51/116 (43%), Positives = 67/116 (57%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
P +D F R G INL ADT II+DSDWNP ND+QA +R HRIGQ V +Y
Sbjct: 1200 PDSDRFVFLLCTRAGGLG--INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVY 1257
Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQAN------FTKQELDDILRFG 831
R +TRNS E + A K+ L V++ M G+ N F+K+E++D+LR G
Sbjct: 1258 RLITRNSYEREMFDKASLKLGLDKAVLQ-SMSGRDGNITGIQQFSKKEIEDLLRKG 1312
Score = 76 (31.8 bits), Expect = 3.6e-99, Sum P(3) = 3.6e-99
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 112 RMARLNRHNINDEELEKKYYRYGIKPEWLIANRVINSKTLRD---GSTI--YLVKWRDLP 166
+MA++ RH +++E E P+++ +R+++ D G + YLVKW LP
Sbjct: 706 KMAQM-RHFFHEDE-EP------FNPDYVEVDRILDESHSVDKDNGEPVIYYLVKWCSLP 757
Query: 167 YDKATWEDENEDI 179
Y+ +TWE + ED+
Sbjct: 758 YEDSTWELK-EDV 769
Score = 75 (31.5 bits), Expect = 7.5e-26, Sum P(3) = 7.5e-26
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 593 PEWLIANRVINSKTLRD---GSTI--YLVKWRDLPYDKATWEDENEDI 635
P+++ +R+++ D G + YLVKW LPY+ +TWE + ED+
Sbjct: 723 PDYVEVDRILDESHSVDKDNGEPVIYYLVKWCSLPYEDSTWELK-EDV 769
Score = 47 (21.6 bits), Expect = 7.5e-26, Sum P(3) = 7.5e-26
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 444 KFNDLTSFQAEFADISKEEQVKRLHDLL 471
K+ + + E+A IS+ E+ KR+H L
Sbjct: 673 KYKNYSYLHCEWATISQLEKDKRIHQKL 700
>UNIPROTKB|Q9HCK8 [details] [associations]
symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0070016 "armadillo repeat
domain binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IDA]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003678 "DNA helicase activity" evidence=IMP] [GO:0035064
"methylated histone residue binding" evidence=IDA] [GO:0045945
"positive regulation of transcription from RNA polymerase III
promoter" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IMP] [GO:0043234 "protein complex" evidence=IDA]
[GO:0002039 "p53 binding" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=IDA] [GO:0071339 "MLL1 complex" evidence=IDA]
[GO:0042393 "histone binding" evidence=ISS] [GO:0032508 "DNA duplex
unwinding" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 Pfam:PF00385
GO:GO:0005524 GO:GO:0045892 GO:GO:0043066 GO:GO:0003677
GO:GO:0001701 GO:GO:0045944 GO:GO:0006351 GO:GO:0035064
GO:GO:0008013 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0043044 GO:GO:0071339 GO:GO:0002039 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0008094 HOVERGEN:HBG107676 EMBL:CR749315
EMBL:AL834524 EMBL:AL135744 EMBL:AL161747 EMBL:CB043942
EMBL:AB046784 EMBL:AK131077 EMBL:BC011695 EMBL:BC025964
EMBL:BC036920 EMBL:BC063693 EMBL:BC073903 EMBL:BC098452
IPI:IPI00398992 IPI:IPI00719073 RefSeq:NP_001164100.1
RefSeq:NP_065971.2 UniGene:Hs.530698 PDB:2CKA PDB:2DL6 PDBsum:2CKA
PDBsum:2DL6 ProteinModelPortal:Q9HCK8 SMR:Q9HCK8 IntAct:Q9HCK8
STRING:Q9HCK8 PhosphoSite:Q9HCK8 DMDM:226706293 PaxDb:Q9HCK8
PRIDE:Q9HCK8 Ensembl:ENST00000399982 Ensembl:ENST00000430710
Ensembl:ENST00000557364 GeneID:57680 KEGG:hsa:57680 UCSC:uc001war.2
UCSC:uc001was.2 CTD:57680 GeneCards:GC14M021853 HGNC:HGNC:20153
HPA:HPA000849 MIM:610528 neXtProt:NX_Q9HCK8 PharmGKB:PA134957052
KO:K04494 OMA:FLAYMED EvolutionaryTrace:Q9HCK8 GenomeRNAi:57680
NextBio:64494 ArrayExpress:Q9HCK8 Bgee:Q9HCK8 CleanEx:HS_CHD8
Genevestigator:Q9HCK8 GermOnline:ENSG00000100888 Uniprot:Q9HCK8
Length = 2581
Score = 667 (239.9 bits), Expect = 4.5e-99, Sum P(3) = 4.5e-99
Identities = 156/383 (40%), Positives = 216/383 (56%)
Query: 204 ELQEDED-GASGSKPRRYTPPPE-----KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGI 257
EL+ED D G R + PE +P KK E + + QL YQLEG+
Sbjct: 762 ELKEDVDEGKIREFKRIQSRHPELKRVNRPQASAWKKLELSHEYKNRN--QLREYQLEGV 819
Query: 258 NWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREF 317
NWL ++W + ILADEMGLGKTIQ+I FL ++ G GPFLV APLSTI NWEREF
Sbjct: 820 NWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVG-IHGPFLVIAPLSTITNWEREF 878
Query: 318 ETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYELIT 377
TW + + Y G R +++ +++ +D+ RG R+ KF L+T++E+I
Sbjct: 879 NTWT-EMNTIVYHGSLASRQMIQQYEMYCKDS--RG----RLIPGAYKFDALITTFEMIL 931
Query: 378 NDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXX 437
+D L IEW +++DEAHRLK+ K L +++K+LLTGTP
Sbjct: 932 SDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLL 991
Query: 438 XXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRV 497
P +F + F +F D+ EEQV++L +L P MLRRLK DV KN+ K E I+ V
Sbjct: 992 HFLEPSQFPSESEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEV 1051
Query: 498 ELSPMQKKYYKYILTRNFEALNPKGGGQ--QVSLLNIMMDLKKCCNHPYLFPAAAEEAPV 555
EL+ +QKKYY+ IL +NF L+ KG G +LLN MM+L+KCCNHPYL A E+
Sbjct: 1052 ELTNIQKKYYRAILEKNFSFLS-KGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILT 1110
Query: 556 QGGQ--------YEIQALTRAAG 570
+ + + +QA+ R+AG
Sbjct: 1111 EFREACHIIPHDFHLQAMVRSAG 1133
Score = 321 (118.1 bits), Expect = 4.5e-99, Sum P(3) = 4.5e-99
Identities = 63/108 (58%), Positives = 77/108 (71%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M + LDILEDYL Y YERIDG + G++RQ +IDRF+ P + +FVFLL TR+GGL
Sbjct: 1155 FSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL 1214
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADT 749
GINL ADT II+DSDWNP ND+QA +R HRIGQ K L T ++
Sbjct: 1215 GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNS 1262
Score = 222 (83.2 bits), Expect = 1.1e-88, Sum P(3) = 1.1e-88
Identities = 51/116 (43%), Positives = 67/116 (57%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
P +D F R G INL ADT II+DSDWNP ND+QA +R HRIGQ V +Y
Sbjct: 1198 PDSDRFVFLLCTRAGGLG--INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVY 1255
Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQAN------FTKQELDDILRFG 831
R +TRNS E + A K+ L V++ M G+ N F+K+E++D+LR G
Sbjct: 1256 RLITRNSYEREMFDKASLKLGLDKAVLQ-SMSGRDGNITGIQQFSKKEIEDLLRKG 1310
Score = 77 (32.2 bits), Expect = 4.5e-99, Sum P(3) = 4.5e-99
Identities = 24/73 (32%), Positives = 45/73 (61%)
Query: 112 RMARLNRHNINDEELEKKYYRYGIKPEWLIANRVIN-SKTL-RD-GSTI--YLVKWRDLP 166
+MA++ RH +++E E P+++ +R+++ S ++ +D G + YLVKW LP
Sbjct: 704 KMAQM-RHFFHEDE-EP------FNPDYVEVDRILDESHSIDKDNGEPVIYYLVKWCSLP 755
Query: 167 YDKATWEDENEDI 179
Y+ +TWE + ED+
Sbjct: 756 YEDSTWELK-EDV 767
Score = 76 (31.8 bits), Expect = 1.1e-25, Sum P(4) = 1.1e-25
Identities = 18/48 (37%), Positives = 33/48 (68%)
Query: 593 PEWLIANRVIN-SKTL-RD-GSTI--YLVKWRDLPYDKATWEDENEDI 635
P+++ +R+++ S ++ +D G + YLVKW LPY+ +TWE + ED+
Sbjct: 721 PDYVEVDRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELK-EDV 767
Score = 47 (21.6 bits), Expect = 1.1e-25, Sum P(4) = 1.1e-25
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 444 KFNDLTSFQAEFADISKEEQVKRLHDLL 471
K+ + + E+A IS+ E+ KR+H L
Sbjct: 671 KYKNYSYLHCEWATISQLEKDKRIHQKL 698
Score = 45 (20.9 bits), Expect = 1.1e-25, Sum P(4) = 1.1e-25
Identities = 16/52 (30%), Positives = 22/52 (42%)
Query: 206 QEDEDGASG----SKPRRYTPPPEKPT-TDLRKKYEKQPPFLDDTGMQLHAY 252
Q ++DG G S PPPE+ T+L K+ P + LH Y
Sbjct: 48 QMNQDGGGGDVGNSSASELVPPPEETAPTELSKESTAPAP----ESITLHDY 95
>SGD|S000000966 [details] [associations]
symbol:CHD1 "Chromatin remodeler that regulates various
aspects of transcription" species:4932 "Saccharomyces cerevisiae"
[GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0042766
"nucleosome mobilization" evidence=IDA] [GO:0000182 "rDNA binding"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0046695 "SLIK (SAGA-like)
complex" evidence=IDA] [GO:0000124 "SAGA complex" evidence=IDA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IGI;IMP] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IDA] [GO:0001178 "regulation of transcriptional start site
selection at RNA polymerase II promoter" evidence=IGI] [GO:2000616
"negative regulation of histone H3-K9 acetylation" evidence=IMP]
[GO:0071441 "negative regulation of histone H3-K14 acetylation"
evidence=IMP] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IGI;IPI] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0031490 "chromatin DNA binding"
evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IGI;IDA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0006369 "termination of RNA polymerase II transcription"
evidence=IGI;IMP] [GO:0071894 "histone H2B conserved C-terminal
lysine ubiquitination" evidence=IMP] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0035064 "methylated histone residue binding" evidence=IDA]
[GO:2000104 "negative regulation of DNA-dependent DNA replication"
evidence=IGI] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IGI] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SGD:S000000966 Pfam:PF00385 GO:GO:0005739
GO:GO:0005524 GO:GO:2000104 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:BK006939 GO:GO:0000124 GO:GO:0046695 GO:GO:0004386
GO:GO:0034401 GO:GO:0006368 GO:GO:0035064 GO:GO:0031490
GO:GO:0042766 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
GO:GO:0016584 EMBL:U18917 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 GO:GO:0006363 GO:GO:0008094 GO:GO:0006369
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
KO:K11367 HOGENOM:HOG000207917 PIR:S30818 RefSeq:NP_011091.1
PDB:2DY7 PDB:2DY8 PDB:2H1E PDB:2XB0 PDB:3MWY PDB:3TED PDBsum:2DY7
PDBsum:2DY8 PDBsum:2H1E PDBsum:2XB0 PDBsum:3MWY PDBsum:3TED
ProteinModelPortal:P32657 SMR:P32657 DIP:DIP-6362N IntAct:P32657
MINT:MINT-618890 STRING:P32657 PaxDb:P32657 PeptideAtlas:P32657
EnsemblFungi:YER164W GeneID:856911 KEGG:sce:YER164W CYGD:YER164w
OMA:IKWQFMA OrthoDB:EOG4TF3TB SABIO-RK:P32657
EvolutionaryTrace:P32657 NextBio:983353 Genevestigator:P32657
GermOnline:YER164W GO:GO:0030874 GO:GO:0000182 GO:GO:0071441
GO:GO:2000616 GO:GO:0001178 Uniprot:P32657
Length = 1468
Score = 650 (233.9 bits), Expect = 6.7e-99, Sum P(3) = 6.7e-99
Identities = 147/369 (39%), Positives = 206/369 (55%)
Query: 229 TDLRKKYEK---QPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTI 285
T R ++EK QPPF+ G +L +QL GINW+ + W + + ILADEMGLGKT+QT+
Sbjct: 355 TSQRPRFEKLSVQPPFIK--GGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTV 412
Query: 286 TFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDIS 345
F+ L GP ++ PLST+ W FE WAPD + Y+G++ R +R+++
Sbjct: 413 AFISWLIFARRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFY 472
Query: 346 WEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSK 405
A GK T+KF+VLLT+YE I D A LGSI+W + VDEAHRLK+ +S
Sbjct: 473 TNPRAK--GK------KTMKFNVLLTTYEYILKDRAELGSIKWQFMAVDEAHRLKNAESS 524
Query: 406 FFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVK 465
++ L+ + + N++L+TGTP P +F E D +EE +
Sbjct: 525 LYESLNSFKVANRMLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDEEQEEYIH 584
Query: 466 RLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQ 525
LH + P +LRRLK DV K++PSK+E I+RVELS +Q +YYK ILT+N+ AL G
Sbjct: 585 DLHRRIQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTAGAKGG 644
Query: 526 QVSLLNIMMDLKKCCNHPYLFPAAAEEAPVQGGQYE------IQALTRAAGXXXXXXXXX 579
SLLNIM +LKK NHPYLF A E + G + ++ L ++G
Sbjct: 645 HFSLLNIMNELKKASNHPYLFDNAEERVLQKFGDGKMTRENVLRGLIMSSGKMVLLDQLL 704
Query: 580 XXXXEDGHR 588
+DGHR
Sbjct: 705 TRLKKDGHR 713
Score = 331 (121.6 bits), Expect = 6.7e-99, Sum P(3) = 6.7e-99
Identities = 63/109 (57%), Positives = 82/109 (75%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M +MLDIL DYL +G ++R+DG + + R+ SID FN+P ++ FVFLLSTR+GGL
Sbjct: 717 FSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGL 776
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYI--NLATADTV 750
GINL TADTV+I+DSDWNP D+QA +RAHRIGQ+N + L + DTV
Sbjct: 777 GINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTV 825
Score = 239 (89.2 bits), Expect = 3.1e-89, Sum P(3) = 3.1e-89
Identities = 48/95 (50%), Positives = 68/95 (71%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INL TADTV+I+DSDWNP D+QA +RAHRIGQ+N VM+YR V++++VEE V + A++KM
Sbjct: 778 INLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKM 837
Query: 802 MLTHLVVRPGM--GGKQANFTKQ---ELDDILRFG 831
+L + ++ G+ G K + EL IL+FG
Sbjct: 838 ILEYAIISLGVTDGNKYTKKNEPNAGELSAILKFG 872
Score = 106 (42.4 bits), Expect = 6.6e-21, Sum P(3) = 6.6e-21
Identities = 33/117 (28%), Positives = 56/117 (47%)
Query: 594 EWLIANRVINSK--TLRDGSTI--YLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTK 649
E+ + R+I+S+ +L DG++ YLVKWR L YD+ATWE+ + + E ++ + +
Sbjct: 283 EFHVPERIIDSQRASLEDGTSQLQYLVKWRRLNYDEATWENATDIVKLAPEQVKHFQNRE 342
Query: 650 MLDILEDYLDG---EGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
IL Y + ++E++ E D F G + FL S G+
Sbjct: 343 NSKILPQYSSNYTSQRPRFEKLSVQPPFIKGGELRD-FQLTGINWMAFLWSKGDNGI 398
Score = 101 (40.6 bits), Expect = 6.7e-99, Sum P(3) = 6.7e-99
Identities = 25/73 (34%), Positives = 43/73 (58%)
Query: 121 INDEELEKKYYRYGIKPEWLIANRVINSK--TLRDGSTI--YLVKWRDLPYDKATWEDEN 176
I D E E++ + E+ + R+I+S+ +L DG++ YLVKWR L YD+ATWE+
Sbjct: 269 IMDMERERRLDEF---EEFHVPERIIDSQRASLEDGTSQLQYLVKWRRLNYDEATWENAT 325
Query: 177 EDIPGLKESIEFY 189
+ + E ++ +
Sbjct: 326 DIVKLAPEQVKHF 338
Score = 46 (21.3 bits), Expect = 5.7e-25, Sum P(2) = 5.7e-25
Identities = 15/45 (33%), Positives = 20/45 (44%)
Query: 614 YLVKWRDLPYDKATWEDENE--DIPGLKESIEFYNMTKMLDILED 656
+L+KW D + TWE + GLK N K I+ED
Sbjct: 213 FLIKWTDESHLHNTWETYESIGQVRGLKR---LDNYCKQF-IIED 253
Score = 45 (20.9 bits), Expect = 5.1e-93, Sum P(3) = 5.1e-93
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 158 YLVKWRDLPYDKATWEDENE--DIPGLK 183
+L+KW D + TWE + GLK
Sbjct: 213 FLIKWTDESHLHNTWETYESIGQVRGLK 240
>POMBASE|SPAC1783.05 [details] [associations]
symbol:hrp1 "ATP-dependent DNA helicase Hrp1"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000779 "condensed chromosome, centromeric
region" evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=ISM] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IMP] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IMP] [GO:0007076 "mitotic chromosome
condensation" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IDA] [GO:0016592 "mediator complex"
evidence=IPI] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0035067 "negative
regulation of histone acetylation" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0048096 "chromatin-mediated maintenance
of transcription" evidence=TAS] [GO:0060303 "regulation of
nucleosome density" evidence=IMP] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 PomBase:SPAC1783.05 Pfam:PF00385 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944
GO:GO:0030466 GO:GO:0000122 GO:GO:0000790 GO:GO:0030702
GO:GO:0004003 GO:GO:0007076 GO:GO:0048096 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000779 GO:GO:0035067 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0016592 GO:GO:0006369 KO:K11367
HOGENOM:HOG000207917 OrthoDB:EOG4TF3TB EMBL:X99021 EMBL:AB027852
PIR:T43334 PIR:T50107 RefSeq:NP_593660.1 ProteinModelPortal:Q9US25
MINT:MINT-4979817 STRING:Q9US25 EnsemblFungi:SPAC1783.05.1
GeneID:2542363 KEGG:spo:SPAC1783.05 OMA:VERVIKW NextBio:20803422
GO:GO:0060303 Uniprot:Q9US25
Length = 1373
Score = 632 (227.5 bits), Expect = 9.9e-99, Sum P(3) = 9.9e-99
Identities = 135/321 (42%), Positives = 192/321 (59%)
Query: 233 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 292
+K EKQP ++ G ++ +QL GINW+ Y W +N + ILADEMGLGKT+QT+ FL L
Sbjct: 376 RKLEKQPSYIK--GGEIRDFQLTGINWMAYLWHRNENGILADEMGLGKTVQTVCFLSYLV 433
Query: 293 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANR 352
GPFL+ PLST+ W+ W PD + Y G+ + R +R+++ + T +R
Sbjct: 434 HSLKQHGPFLIVVPLSTVPAWQETLANWTPDLNSICYTGNTESRANIREYEF-YLSTNSR 492
Query: 353 GGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSG 412
+KF++LLT+YE I D L +I W L +DEAHRLK+++S ++ LS
Sbjct: 493 ----------KLKFNILLTTYEYILKDKQELNNIRWQYLAIDEAHRLKNSESSLYETLSQ 542
Query: 413 YSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLG 472
+ N+LL+TGTP P KF + + +E ++ L + L
Sbjct: 543 FRTANRLLITGTPLQNNLKELASLVNFLMPGKFYIRDELNFDQPNAEQERDIRDLQERLQ 602
Query: 473 PHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQ-QVSLLN 531
P +LRRLK DV K++PSKSE I+RVELS MQ ++YK ILT+N+ AL G+ Q+SLLN
Sbjct: 603 PFILRRLKKDVEKSLPSKSERILRVELSDMQTEWYKNILTKNYRALTGHTDGRGQLSLLN 662
Query: 532 IMMDLKKCCNHPYLFPAAAEE 552
I+++LKK NHPYLFP AAE+
Sbjct: 663 IVVELKKVSNHPYLFPGAAEK 683
Score = 340 (124.7 bits), Expect = 9.9e-99, Sum P(3) = 9.9e-99
Identities = 76/164 (46%), Positives = 106/164 (64%)
Query: 590 GIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTK 649
G +W++ ++ TLR I + + + DK +++ G + I F M +
Sbjct: 679 GAAEKWMMGRKMTREDTLRG---IIMNSGKMVLLDKLLQRLKHD---GHRVLI-FSQMVR 731
Query: 650 MLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLAT 709
ML+IL +Y+ GY Y+R+DG I S+R+ SID FNAP + FVFLLSTR+GGLGINL T
Sbjct: 732 MLNILGEYMSLRGYNYQRLDGTIPASVRRVSIDHFNAPDSPDFVFLLSTRAGGLGINLNT 791
Query: 710 ADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINL---ATADTV 750
ADTVII+DSDWNP D+QA +RAHRIGQ+N ++N+ + DTV
Sbjct: 792 ADTVIIFDSDWNPQADLQAMARAHRIGQKN-HVNVYRFLSKDTV 834
Score = 247 (92.0 bits), Expect = 5.9e-89, Sum P(3) = 5.9e-89
Identities = 49/95 (51%), Positives = 69/95 (72%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INL TADTVII+DSDWNP D+QA +RAHRIGQ+N V +YRF+++++VEE + + A+RKM
Sbjct: 787 INLNTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVNVYRFLSKDTVEEDILERARRKM 846
Query: 802 MLTHLVVRPGMGGKQAN-----FTKQELDDILRFG 831
+L + ++ G+ K N + QEL IL+FG
Sbjct: 847 ILEYAIISLGVTEKSKNSKNDKYDAQELSAILKFG 881
Score = 120 (47.3 bits), Expect = 9.9e-99, Sum P(3) = 9.9e-99
Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 123 DEELEKKYYRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWED 174
D E E+K + E+ I R++ S+T +G T Y VKWR LPYD TWED
Sbjct: 290 DIERERKNMLF---EEYKIVERIVASETNEEGKTEYFVKWRQLPYDNCTWED 338
Score = 118 (46.6 bits), Expect = 3.8e-24, Sum P(3) = 3.8e-24
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 594 EWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWED 630
E+ I R++ S+T +G T Y VKWR LPYD TWED
Sbjct: 302 EYKIVERIVASETNEEGKTEYFVKWRQLPYDNCTWED 338
Score = 57 (25.1 bits), Expect = 3.8e-17, Sum P(2) = 3.8e-17
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 614 YLVKWRDLPYDKATWEDEN--EDIPGLKESIEFYNMTKMLD--ILED 656
YL+KW+++ + TWED + + G K+ + + D I ED
Sbjct: 232 YLIKWQEVSHLHNTWEDYSTLSSVRGYKKVDNYIKQNIIYDREIRED 278
Score = 55 (24.4 bits), Expect = 6.7e-92, Sum P(3) = 6.7e-92
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 158 YLVKWRDLPYDKATWED 174
YL+KW+++ + TWED
Sbjct: 232 YLIKWQEVSHLHNTWED 248
>POMBASE|SPAC3G6.01 [details] [associations]
symbol:hrp3 "ATP-dependent DNA helicase Hrp3"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0000790 "nuclear
chromatin" evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IC] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISM] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0031934 "mating-type region heterochromatin" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEP] [GO:0060303 "regulation of
nucleosome density" evidence=IMP] [GO:0030702 "chromatin silencing
at centromere" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
PomBase:SPAC3G6.01 Pfam:PF00385 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
GO:GO:0006338 GO:GO:0030466 GO:GO:0000790 GO:GO:0000070
GO:GO:0004003 GO:GO:0031934 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 KO:K11367 HOGENOM:HOG000207917
OrthoDB:EOG4TF3TB GO:GO:0060303 PIR:T38720 RefSeq:NP_594967.1
ProteinModelPortal:O14139 MINT:MINT-4670837 STRING:O14139
EnsemblFungi:SPAC3G6.01.1 GeneID:2543064 KEGG:spo:SPAC3G6.01
OMA:HINGSST NextBio:20804092 Uniprot:O14139
Length = 1388
Score = 644 (231.8 bits), Expect = 4.5e-98, Sum P(3) = 4.5e-98
Identities = 142/362 (39%), Positives = 204/362 (56%)
Query: 233 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 292
+K E+QP ++ TG +L +QL G+NW+ Y W +N + ILADEMGLGKT+QT+ FL L
Sbjct: 361 RKLEQQPSYI--TGGELRDFQLTGVNWMAYLWHKNENGILADEMGLGKTVQTVAFLSYLA 418
Query: 293 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANR 352
GPFLV PLST+ W+ WA D ++Y+G+ R V+RD++ + T
Sbjct: 419 HSLRQHGPFLVVVPLSTVPAWQETLALWASDMNCISYLGNTTSRQVIRDYEFYVDGTQK- 477
Query: 353 GGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSG 412
+KF++LLT+YE + D ++L +I+W + +DEAHRLK+++S ++ LS
Sbjct: 478 -----------IKFNLLLTTYEYVLKDRSVLSNIKWQYMAIDEAHRLKNSESSLYEALSQ 526
Query: 413 YSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLG 472
+ N+LL+TGTP P KF E D +E ++ L + L
Sbjct: 527 FKNSNRLLITGTPLQNNIRELAALVDFLMPGKFEIREEINLEAPDEEQEAYIRSLQEHLQ 586
Query: 473 PHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPK-GGGQQVSLLN 531
P++LRRLK DV K++PSKSE I+RVELS +Q +YK ILTRN+ L G Q+SLLN
Sbjct: 587 PYILRRLKKDVEKSLPSKSERILRVELSDLQMYWYKNILTRNYRVLTQSISSGSQISLLN 646
Query: 532 IMMDLKKCCNHPYLFPAAAE----EAPVQGGQYEI-QALTRAAGXXXXXXXXXXXXXEDG 586
I+++LKK NHPYLF E + QG + E+ + L +G DG
Sbjct: 647 IVVELKKASNHPYLFDGVEESWMQKINSQGRRDEVLKGLIMNSGKMVLLDKLLSRLRRDG 706
Query: 587 HR 588
HR
Sbjct: 707 HR 708
Score = 340 (124.7 bits), Expect = 4.5e-98, Sum P(3) = 4.5e-98
Identities = 65/109 (59%), Positives = 82/109 (75%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M +MLDIL DYL GY ++R+DG + ++R+ SID FNAP + FVFLLSTR+GGL
Sbjct: 712 FSQMVRMLDILGDYLSLRGYPHQRLDGTVPAAVRRTSIDHFNAPNSPDFVFLLSTRAGGL 771
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYI--NLATADTV 750
GINL TADTVII+DSDWNP D+QA +RAHRIGQ+N + L + DT+
Sbjct: 772 GINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLLSKDTI 820
Score = 257 (95.5 bits), Expect = 2.4e-89, Sum P(3) = 2.4e-89
Identities = 50/95 (52%), Positives = 71/95 (74%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INL TADTVII+DSDWNP D+QA +RAHRIGQ+N VM+YR ++++++EE V + A+RKM
Sbjct: 773 INLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLLSKDTIEEDVLERARRKM 832
Query: 802 MLTHLVVRPGMGGKQAN-----FTKQELDDILRFG 831
+L + ++ G+ KQ N F+ +EL IL+FG
Sbjct: 833 ILEYAIISLGVTDKQKNSKNDKFSAEELSAILKFG 867
Score = 95 (38.5 bits), Expect = 4.5e-98, Sum P(3) = 4.5e-98
Identities = 21/56 (37%), Positives = 31/56 (55%)
Query: 118 RHNINDEELEKKYYRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWE 173
R +I ++EK+ R + E+ +R++ DGS YLVKW+ L YD TWE
Sbjct: 267 REDIEAMDIEKERKRENYE-EYKQVDRIVAKHLNSDGSVEYLVKWKQLLYDFCTWE 321
Score = 84 (34.6 bits), Expect = 1.0e-30, Sum P(3) = 1.0e-30
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 594 EWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWE 629
E+ +R++ DGS YLVKW+ L YD TWE
Sbjct: 286 EYKQVDRIVAKHLNSDGSVEYLVKWKQLLYDFCTWE 321
Score = 55 (24.4 bits), Expect = 7.2e-94, Sum P(3) = 7.2e-94
Identities = 21/66 (31%), Positives = 30/66 (45%)
Query: 123 DEELEKKYYRYGIK----PEWLIANRVINSKTL---RDGSTI-----YLVKWRDLPYDKA 170
+EE E++ Y Y + PE A V+ L DGST +L+KW + +
Sbjct: 169 EEEEEEEMYEYATEVSEEPEDTRAIDVVLDHRLIEGHDGSTPSEDYEFLIKWVNFSHLHC 228
Query: 171 TWEDEN 176
TWE N
Sbjct: 229 TWEPYN 234
Score = 51 (23.0 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 609 DGSTI-----YLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILE 655
DGST +L+KW + + TWE N +I ++ S + N K + +L+
Sbjct: 206 DGSTPSEDYEFLIKWVNFSHLHCTWEPYN-NISMIRGSKKVDNHIKQVILLD 256
Score = 45 (20.9 bits), Expect = 8.1e-31, Sum P(3) = 8.1e-31
Identities = 13/46 (28%), Positives = 25/46 (54%)
Query: 607 LRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESI-EFYNMTKML 651
L+D S + +KW+ + D+A +E L E++ +F N ++L
Sbjct: 491 LKDRSVLSNIKWQYMAIDEAHRLKNSES--SLYEALSQFKNSNRLL 534
Score = 39 (18.8 bits), Expect = 2.8e-25, Sum P(2) = 2.8e-25
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 151 LRDGSTIYLVKWRDLPYDKA 170
L+D S + +KW+ + D+A
Sbjct: 491 LKDRSVLSNIKWQYMAIDEA 510
Score = 37 (18.1 bits), Expect = 2.8e-66, Sum P(3) = 2.8e-66
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 730 SRAHRIGQQNKYINLATADTVII 752
S HR KY +L T D +I
Sbjct: 1012 SLEHRYNDIVKYADLTTQDAHVI 1034
>UNIPROTKB|H0YJG4 [details] [associations]
symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AL135744 EMBL:AL161747
HGNC:HGNC:20153 Ensembl:ENST00000555935 Uniprot:H0YJG4
Length = 873
Score = 661 (237.7 bits), Expect = 7.7e-97, Sum P(2) = 7.7e-97
Identities = 147/355 (41%), Positives = 205/355 (57%)
Query: 226 KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTI 285
+P KK E + + QL YQLEG+NWL ++W + ILADEMGLGKTIQ+I
Sbjct: 16 RPQASAWKKLELSHEYKNRN--QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSI 73
Query: 286 TFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDIS 345
FL ++ G GPFLV APLSTI NWEREF TW + + Y G R +++ +++
Sbjct: 74 AFLQEVYNVG-IHGPFLVIAPLSTITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMY 131
Query: 346 WEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSK 405
+D+ RG R+ KF L+T++E+I +D L IEW +++DEAHRLK+ K
Sbjct: 132 CKDS--RG----RLIPGAYKFDALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCK 185
Query: 406 FFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVK 465
L +++K+LLTGTP P +F + F +F D+ EEQV+
Sbjct: 186 LLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQ 245
Query: 466 RLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQ 525
+L +L P MLRRLK DV KN+ K E I+ VEL+ +QKKYY+ IL +NF L+ KG G
Sbjct: 246 KLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLS-KGAGH 304
Query: 526 --QVSLLNIMMDLKKCCNHPYLFPAAAEEAPVQGGQ--------YEIQALTRAAG 570
+LLN MM+L+KCCNHPYL A E+ + + + +QA+ R+AG
Sbjct: 305 TNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAG 359
Score = 321 (118.1 bits), Expect = 7.7e-97, Sum P(2) = 7.7e-97
Identities = 63/108 (58%), Positives = 77/108 (71%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M + LDILEDYL Y YERIDG + G++RQ +IDRF+ P + +FVFLL TR+GGL
Sbjct: 381 FSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL 440
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADT 749
GINL ADT II+DSDWNP ND+QA +R HRIGQ K L T ++
Sbjct: 441 GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNS 488
Score = 222 (83.2 bits), Expect = 2.1e-86, Sum P(2) = 2.1e-86
Identities = 51/116 (43%), Positives = 67/116 (57%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
P +D F R G INL ADT II+DSDWNP ND+QA +R HRIGQ V +Y
Sbjct: 424 PDSDRFVFLLCTRAGGLG--INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVY 481
Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQAN------FTKQELDDILRFG 831
R +TRNS E + A K+ L V++ M G+ N F+K+E++D+LR G
Sbjct: 482 RLITRNSYEREMFDKASLKLGLDKAVLQ-SMSGRDGNITGIQQFSKKEIEDLLRKG 536
>WB|WBGene00010369 [details] [associations]
symbol:chd-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0003677
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
KO:K11367 HOGENOM:HOG000207917 OMA:VERVIKW EMBL:Z92970 PIR:T23056
RefSeq:NP_491994.2 ProteinModelPortal:O17909 SMR:O17909
STRING:O17909 PaxDb:O17909 EnsemblMetazoa:H06O01.2 GeneID:172432
KEGG:cel:CELE_H06O01.2 UCSC:H06O01.2 CTD:172432 WormBase:H06O01.2
InParanoid:O17909 NextBio:875487 Uniprot:O17909
Length = 1461
Score = 637 (229.3 bits), Expect = 1.4e-95, Sum P(4) = 1.4e-95
Identities = 143/373 (38%), Positives = 210/373 (56%)
Query: 224 PEKPTTDLRK-----KYEKQPPFLDDTGMQLHA---YQLEGINWLRYSWGQNIDTILADE 275
P K + LRK K+E P FL G H YQLEG+NW+ Y+W + +ILADE
Sbjct: 372 PNKNSNVLRKRPKFEKFESMPDFLKTDGESTHKLRDYQLEGLNWMVYAWCKGNSSILADE 431
Query: 276 MGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDC 335
MGLGKTIQ+I+ L SLF GP+LV PLST+ W++EF WAP+ +V Y+GD
Sbjct: 432 MGLGKTIQSISLLASLFHRYDLAGPYLVVVPLSTMAAWQKEFAQWAPEMNLVVYMGDVVS 491
Query: 336 RIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDE 395
R ++R ++ W GG + +K + +LT+YE++ D A L SI+WA L+VDE
Sbjct: 492 RDMIRQYE--WFV----GG------TKKMKINAILTTYEILLKDKAFLSSIDWAALLVDE 539
Query: 396 AHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEF 455
AHRLK+++S +K L+ + +KLL+TGTP PEKF+ F+
Sbjct: 540 AHRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIMPEKFDCWEEFETAH 599
Query: 456 ADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNF 515
+ S + + LH L P +LRR+K DV K++P K+E I+RV+++ QK++YK+ILT+N+
Sbjct: 600 NE-SNHKGISALHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTAHQKQFYKWILTKNY 658
Query: 516 EALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGXXXXX 575
L+ G +N++M+LKKCCNH L + Q +Q L +++G
Sbjct: 659 RELSKGVKGSINGFVNLVMELKKCCNHASL--TRQYDHIYDDAQGRLQQLLKSSGKLILL 716
Query: 576 XXXXXXXXEDGHR 588
+ GHR
Sbjct: 717 DKLLCRLKDKGHR 729
Score = 328 (120.5 bits), Expect = 1.4e-95, Sum P(4) = 1.4e-95
Identities = 60/101 (59%), Positives = 80/101 (79%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M MLDIL++YL + +R+DG++ +R++++D +NAPG++ F FLLSTR+GGL
Sbjct: 733 FSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQALDHYNAPGSTDFAFLLSTRAGGL 792
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINL 744
GINLATADTVII+DSDWNP ND+QA SRAHRIGQ K +N+
Sbjct: 793 GINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQ-TKTVNI 832
Score = 262 (97.3 bits), Expect = 1.1e-88, Sum P(4) = 1.1e-88
Identities = 60/102 (58%), Positives = 69/102 (67%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATADTVII+DSDWNP ND+QA SRAHRIGQ V IYR VT+ SVEE + + AKRK+
Sbjct: 794 INLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEIVERAKRKL 853
Query: 802 MLTHLVV-RPGMGGKQA---N--------FTKQELDDILRFG 831
+L HLV+ R GK N F KQEL IL+FG
Sbjct: 854 VLDHLVIQRMDTTGKTVLSKNATASGSVPFDKQELSAILKFG 895
Score = 94 (38.1 bits), Expect = 1.4e-95, Sum P(4) = 1.4e-95
Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 124 EELEKKYYRYGIKPEWLIANRVINSKTLRDGS--TIYLVKWRDLPYDKATWEDENEDIPG 181
EEL ++Y K E ++A++ + DGS T YL+KW LPY TWEDE P
Sbjct: 303 EELCEEYK----KVERVVAHQTSRDRAA-DGSMATEYLIKWSGLPYSDCTWEDEKMVAP- 356
Query: 182 LKESIEFY 189
E I+ Y
Sbjct: 357 --EQIKAY 362
Score = 93 (37.8 bits), Expect = 2.4e-21, Sum P(4) = 2.4e-21
Identities = 33/107 (30%), Positives = 47/107 (43%)
Query: 594 EWLIANRVINSKTLRD----GS--TIYLVKWRDLPYDKATWEDEN----EDIPGLKESIE 643
E+ RV+ +T RD GS T YL+KW LPY TWEDE E I IE
Sbjct: 308 EYKKVERVVAHQTSRDRAADGSMATEYLIKWSGLPYSDCTWEDEKMVAPEQIKAYYHRIE 367
Query: 644 -FYNMTKMLDILEDYLDGEGYK----YERIDGNITGSMRQESIDRFN 685
+ K ++L E ++ + + DG T +R ++ N
Sbjct: 368 NLKSPNKNSNVLRKRPKFEKFESMPDFLKTDGESTHKLRDYQLEGLN 414
Score = 51 (23.0 bits), Expect = 1.1e-16, Sum P(4) = 1.1e-16
Identities = 15/70 (21%), Positives = 30/70 (42%)
Query: 614 YLVKWRDLPYDKATWEDENE----DIPGLKESIEFYNMTKMLDILEDYLDGEGYKYERID 669
+ VKW + TWE EN + GLK+ + K +++ + D E ++ +
Sbjct: 239 FFVKWTGWSHLHNTWESENSLALMNAKGLKKVQNYVKKQKEVEMWKRSADKEYIEFFECE 298
Query: 670 GNITGSMRQE 679
+ + +E
Sbjct: 299 QQMAEELCEE 308
Score = 45 (20.9 bits), Expect = 1.8e-90, Sum P(4) = 1.8e-90
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 158 YLVKWRDLPYDKATWEDEN 176
+ VKW + TWE EN
Sbjct: 239 FFVKWTGWSHLHNTWESEN 257
Score = 41 (19.5 bits), Expect = 4.8e-90, Sum P(4) = 4.8e-90
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 167 YDKATWEDENEDIPGLKESIEFY 189
Y+ A D N+ IPG K +F+
Sbjct: 218 YNIADKGDPNDQIPGDKTEQQFF 240
Score = 41 (19.5 bits), Expect = 4.1e-23, Sum P(3) = 4.1e-23
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 623 YDKATWEDENEDIPGLKESIEFY 645
Y+ A D N+ IPG K +F+
Sbjct: 218 YNIADKGDPNDQIPGDKTEQQFF 240
Score = 38 (18.4 bits), Expect = 1.4e-95, Sum P(4) = 1.4e-95
Identities = 6/8 (75%), Positives = 7/8 (87%)
Query: 867 HHYEQHQE 874
HH EQH+E
Sbjct: 1449 HHREQHKE 1456
>ZFIN|ZDB-GENE-030131-6320 [details] [associations]
symbol:chd8 "chromodomain helicase DNA binding
protein 8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00717 Pfam:PF00385
ZFIN:ZDB-GENE-030131-6320 GO:GO:0005524 GO:GO:0006355 GO:GO:0016055
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 EMBL:AL928674 IPI:IPI00919855
UniGene:Dr.81397 PRIDE:B0R0I6 HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC
Uniprot:B0R0I6
Length = 2511
Score = 649 (233.5 bits), Expect = 6.3e-94, Sum P(3) = 6.3e-94
Identities = 148/366 (40%), Positives = 204/366 (55%)
Query: 216 KPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADE 275
+PR P +P KK ++ + + G QL YQLEG+NWL ++W + ILADE
Sbjct: 818 QPRLKRTP--RPAASAWKKLDESTEYKN--GNQLREYQLEGVNWLLFNWYNRQNCILADE 873
Query: 276 MGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDC 335
MGLGKTIQ+I L +F G + PF++ APLSTI NWEREF W D + Y G
Sbjct: 874 MGLGKTIQSIALLSEMFSAG-VQSPFMIIAPLSTITNWEREFSNWT-DMNAIVYHGSLAS 931
Query: 336 RIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDE 395
R +++ +++ +D ++G + KF L+T++E+I +D L I W +V+DE
Sbjct: 932 RQMIQQYEMYCKD--DKG----HLIPGAYKFDALITTFEMILSDCPELREISWRCVVIDE 985
Query: 396 AHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEF 455
AHRLK+ K L I++K+LLTGTP P +F F EF
Sbjct: 986 AHRLKNRNCKLLDSLKMLEIEHKVLLTGTPLQNTVEELFSLLHFLEPAQFPSEIEFLREF 1045
Query: 456 ADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNF 515
D+ EEQV++L +L P MLRRLK DV KN+ K E I+ VEL+ +QKKYY+ IL RNF
Sbjct: 1046 GDLKTEEQVQKLQSILKPMMLRRLKEDVEKNLAPKQETIIEVELTDVQKKYYRAILERNF 1105
Query: 516 EALNPKGGGQQVS---LLNIMMDLKKCCNHPYLFPAAAEEAPVQ--------GGQYEIQA 564
L+ G Q + LLN MM+L+KCCNHPYL A E+ + + +QA
Sbjct: 1106 SFLS-MGATQNSNVPNLLNTMMELRKCCNHPYLITGAEEKIVSELREVYDPLAPDFHLQA 1164
Query: 565 LTRAAG 570
L R+AG
Sbjct: 1165 LVRSAG 1170
Score = 322 (118.4 bits), Expect = 6.3e-94, Sum P(3) = 6.3e-94
Identities = 90/260 (34%), Positives = 135/260 (51%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M + LDILEDYL + Y YERIDG + G++RQ +IDRF+ P + +FVFLL TR+GGL
Sbjct: 1192 FSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL 1251
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDI 763
GINL ADT +I+DSDWNP ND+QA +R HRIGQ +K + + T Y+ + +
Sbjct: 1252 GINLTAADTCVIFDSDWNPQNDLQAQARCHRIGQ-SKAVKVYRLITRNSYEREMLDKASL 1310
Query: 764 Q-AFSRA--HRIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQANFT 820
+ RA + + I +F ++ +E+ + + A +M + + F
Sbjct: 1311 KLGLDRAVLQSMSGNKESSIQQF-SKKEIEDLLRKGAYAAIM--------DENDEGSRFC 1361
Query: 821 KQELDDIL-RFGTXXXXXXXXXXXXXXXIIKQEAENQ------DPAYWVKLLRHHYEQHQ 873
++++D IL R T +EN+ DP +W K + +
Sbjct: 1362 EEDIDQILQRRATTITIESEGKGSTFSKASFVASENRTDIALDDPEFWQKWAKKA-DIDM 1420
Query: 874 EDVSR--TLG-KGKRVRKQT 890
+ ++R TL RVRKQT
Sbjct: 1421 DSLNRKNTLVIDTPRVRKQT 1440
Score = 78 (32.5 bits), Expect = 6.3e-94, Sum P(3) = 6.3e-94
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 137 PEWLIANRVINSKTLRD---GSTI--YLVKWRDLPYDKATWEDENEDI 179
P+++ +R+++ D G + YLVKW LPY+ ATWE + ED+
Sbjct: 757 PDYVEVDRILDESHSVDKDNGEPVVYYLVKWCSLPYEDATWELK-EDV 803
Score = 78 (32.5 bits), Expect = 8.6e-26, Sum P(3) = 8.6e-26
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 593 PEWLIANRVINSKTLRD---GSTI--YLVKWRDLPYDKATWEDENEDI 635
P+++ +R+++ D G + YLVKW LPY+ ATWE + ED+
Sbjct: 757 PDYVEVDRILDESHSVDKDNGEPVVYYLVKWCSLPYEDATWELK-EDV 803
Score = 46 (21.3 bits), Expect = 5.8e-65, Sum P(3) = 5.8e-65
Identities = 23/90 (25%), Positives = 39/90 (43%)
Query: 702 GLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADT------VIIYDS 755
G G +L+ D+ D D+ PHN Q SRA R ++ D +++Y
Sbjct: 1448 GEGGDLSDLDS----DDDYPPHNSRQ--SRASRRSDRHSGGGYGRTDCFRVEKHLLVYG- 1500
Query: 756 DWNPHNDIQAFSRA-HRIGQQNKVMIYRFV 784
W DI + +R R+ +++ I R +
Sbjct: 1501 -WGRWRDILSHARCKRRLSERDVETICRVI 1529
Score = 42 (19.8 bits), Expect = 8.6e-26, Sum P(3) = 8.6e-26
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 444 KFNDLTSFQAEFADISKEEQVKRLHDLL 471
K+ + + E+A + + E+ KR+H L
Sbjct: 707 KYKNYSYMHCEWASLEQLERDKRIHQKL 734
>DICTYBASE|DDB_G0280705 [details] [associations]
symbol:DDB_G0280705 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00717
dictyBase:DDB_G0280705 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006357 GO:GO:0003682 EMBL:AAFI02000037
GO:GO:0004003 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
KO:K14437 RefSeq:XP_641133.1 ProteinModelPortal:Q54UZ8
EnsemblProtists:DDB0220644 GeneID:8622691 KEGG:ddi:DDB_G0280705
InParanoid:Q54UZ8 OMA:YPHERID ProtClustDB:CLSZ2846801
Uniprot:Q54UZ8
Length = 2373
Score = 644 (231.8 bits), Expect = 2.2e-92, Sum P(3) = 2.2e-92
Identities = 144/352 (40%), Positives = 202/352 (57%)
Query: 224 PEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQ 283
P P T KK ++ P + G +L YQLEG+NWL + W + ++IL DEMGLGKT+Q
Sbjct: 486 PRPPRTAW-KKIDQSPDYFTK-GNKLRPYQLEGLNWLSFCWHEQRNSILGDEMGLGKTVQ 543
Query: 284 TITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHD 343
+++ L +L K +GPFLV APL+TI +W+REFE W D + Y R + R+++
Sbjct: 544 SVSILETLRKVHGIRGPFLVVAPLTTIPHWKREFENWT-DMNALVYHDSGAGRPICRNYE 602
Query: 344 ISWEDTANRGGKPCRIRSSTV-KFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSN 402
+D GG S + KF+VL+T+YE+ D L I W LV+DEAHRLK+
Sbjct: 603 FYLKDKDGGGGGASGGASGKITKFNVLITTYEMAITDRTHLSRIPWKYLVIDEAHRLKNK 662
Query: 403 QSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEE 462
K L YS + LLLTGTP P++F++L F E+ D+ +
Sbjct: 663 SCKLTIELRSYSFDHLLLLTGTPLQNNTQELWSLLNFLDPKQFSNLDQFLLEYGDLKESS 722
Query: 463 QVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKG 522
QV+ L +L P++LRR+K V K++ K E IV VEL+ +QKKYY+ I +NF L KG
Sbjct: 723 QVESLQAILKPYLLRRMKERVEKSIAPKEETIVEVELTTVQKKYYRAIYEKNFSFLR-KG 781
Query: 523 G--GQQVSLLNIMMDLKKCCNHPYLFPAA--AEEAPVQGGQYEIQALTRAAG 570
G Q SLLNIMM+L+KCCNHPYL +E + ++ Q L +A+G
Sbjct: 782 GKSNQGPSLLNIMMELRKCCNHPYLTKGVEQSETSSIKDKDQIFQKLIQASG 833
Score = 328 (120.5 bits), Expect = 2.2e-92, Sum P(3) = 2.2e-92
Identities = 64/108 (59%), Positives = 79/108 (73%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M +LDIL+DYL GY +ERIDG+I G+ RQ +IDRF+ P + +FVFLL TR+GG+
Sbjct: 855 FSQMVSVLDILDDYLTYRGYPHERIDGSIKGNDRQAAIDRFSKPDSDRFVFLLCTRAGGI 914
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADT 749
GINL ADTVII+DSDWNP ND+QA +R HRIGQ K L T +T
Sbjct: 915 GINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQDKMVKVYRLVTKNT 962
Score = 192 (72.6 bits), Expect = 4.2e-78, Sum P(3) = 4.2e-78
Identities = 50/125 (40%), Positives = 65/125 (52%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
P +D F R G INL ADTVII+DSDWNP ND+QA +R HRIGQ V +Y
Sbjct: 898 PDSDRFVFLLCTRAGGIG--INLTAADTVIIFDSDWNPQNDLQAQARCHRIGQDKMVKVY 955
Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRP---------GMGGKQANFTKQELDD------ 826
R VT+N+ E + A +K+ L V+ G ++ TK EL D
Sbjct: 956 RLVTKNTYERLMFDKASKKLGLDRAVLTKMNSLADSNNGNNSSSSSTTKDELPDKETINS 1015
Query: 827 ILRFG 831
+L+FG
Sbjct: 1016 LLKFG 1020
Score = 71 (30.1 bits), Expect = 9.8e-27, Sum P(3) = 9.8e-27
Identities = 12/37 (32%), Positives = 23/37 (62%)
Query: 614 YLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKM 650
YL+KW+ + Y +TWE +++ LK ++Y + +M
Sbjct: 441 YLIKWKSISYSLSTWEYQDDFKDDLKIE-QYYKLNEM 476
Score = 66 (28.3 bits), Expect = 2.2e-92, Sum P(3) = 2.2e-92
Identities = 23/87 (26%), Positives = 40/87 (45%)
Query: 112 RMARLNRHNINDEELEKKYYRYGIKPEW---LIANRVINSKTLRDGSTI------YLVKW 162
R+ R + NI +E+ +P W +V++ +T+ S YL+KW
Sbjct: 387 RLQRFIQKNIENED-NSDLLVSSTQPSWEEFTEVEKVLDVRTVSVTSNKFKADKQYLIKW 445
Query: 163 RDLPYDKATWEDENEDIPGLKESIEFY 189
+ + Y +TWE +++ LK IE Y
Sbjct: 446 KSISYSLSTWEYQDDFKDDLK--IEQY 470
Score = 51 (23.0 bits), Expect = 8.3e-91, Sum P(3) = 8.3e-91
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 159 LVKWRDLPYDKATW 172
LVKW+DL Y ++W
Sbjct: 359 LVKWKDLSYIHSSW 372
Score = 51 (23.0 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 615 LVKWRDLPYDKATW 628
LVKW+DL Y ++W
Sbjct: 359 LVKWKDLSYIHSSW 372
Score = 43 (20.2 bits), Expect = 2.2e-25, Sum P(3) = 2.2e-25
Identities = 27/122 (22%), Positives = 50/122 (40%)
Query: 451 FQAEFADISKEEQVKRLHDLLGPHMLR---RLKADVLKNMPSKSEFIVRV-ELSPMQKKY 506
+Q +F D K EQ +L+++ LR R K + ++ + +L P Q +
Sbjct: 457 YQDDFKDDLKIEQYYKLNEMPSKEELRDKPRPPRTAWKKIDQSPDYFTKGNKLRPYQLEG 516
Query: 507 YKYIL-----TRNFEALNPKGGGQQVSLLNIMMDLKKC--CNHPYLFPAAAEEAPVQGGQ 559
++ RN + G G+ V ++I+ L+K P+L A P +
Sbjct: 517 LNWLSFCWHEQRNSILGDEMGLGKTVQSVSILETLRKVHGIRGPFLVVAPLTTIPHWKRE 576
Query: 560 YE 561
+E
Sbjct: 577 FE 578
Score = 40 (19.1 bits), Expect = 3.6e-62, Sum P(3) = 3.6e-62
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 659 DGEGYKYERIDGNITGSM 676
DG+ Y+YE DG I M
Sbjct: 2351 DGD-YEYEEDDGYINDDM 2367
Score = 38 (18.4 bits), Expect = 1.9e-89, Sum P(3) = 1.9e-89
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 221 TPPPEKPTT 229
TPPP KP +
Sbjct: 195 TPPPPKPVS 203
Score = 38 (18.4 bits), Expect = 5.8e-62, Sum P(3) = 5.8e-62
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 646 NMTKMLDILEDYLDGEGYKYERID 669
++ +L E++ D EG+K RID
Sbjct: 2017 SLINILHSEEEFSDNEGFK--RID 2038
>UNIPROTKB|H9L0N0 [details] [associations]
symbol:H9L0N0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 EMBL:AADN02032856 EMBL:AADN02032857
EMBL:AADN02032858 EMBL:AADN02032859 EMBL:AADN02032860
EMBL:AADN02032861 EMBL:AADN02032862 EMBL:AADN02032863
EMBL:AADN02032864 EMBL:AADN02032865 Ensembl:ENSGALT00000023599
Uniprot:H9L0N0
Length = 1444
Score = 668 (240.2 bits), Expect = 2.3e-90, Sum P(4) = 2.3e-90
Identities = 144/354 (40%), Positives = 205/354 (57%)
Query: 236 EKQPPFLDDTG-MQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKE 294
+KQP ++ ++L YQL G+NWL +SW + ILADEMGLGKTIQTI+FL LF E
Sbjct: 142 KKQPFYIGGRDCLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHE 201
Query: 295 GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGG 354
GPFL+ PLST+ +W+RE +TWAP V Y+GD R ++R H+ W
Sbjct: 202 HELYGPFLLVVPLSTLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHE--WMH------ 253
Query: 355 KPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYS 414
P ++ +KF++LLT+YE++ D + LG + W + +DEAHRLK++ S +K L +
Sbjct: 254 -P---QTKRLKFNILLTTYEILLKDKSFLGGLNWVFIGIDEAHRLKNDDSLLYKTLIDFK 309
Query: 415 IQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPH 474
++LL+TGTP PEKF+ F+ E +E LH L P
Sbjct: 310 SNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGK-GREFGYASLHKELEPF 368
Query: 475 MLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMM 534
+LRR+K DV K++P+K E I+R+E+S +QK+YYK+ILTRN++AL+ G LNIMM
Sbjct: 369 LLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMM 428
Query: 535 DLKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
+LKKCCNH YL ++ Q +Q L R++G E G+R
Sbjct: 429 ELKKCCNHCYLIKPP-DDNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNR 481
Score = 140 (54.3 bits), Expect = 2.3e-90, Sum P(4) = 2.3e-90
Identities = 32/89 (35%), Positives = 51/89 (57%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGA----SQFVFLLSTR 699
F M +MLDIL +YL + ++R+DG+I G +R++++D FNA G+ S F + L+ +
Sbjct: 485 FSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSENLTSLFCYHLTRK 544
Query: 700 SGGLGINLATADTVIIYDSDWNPHNDIQA 728
S L +L + I WNP + I A
Sbjct: 545 SLTLKTHLRNGHNIDIIAFFWNPCSCINA 573
Score = 111 (44.1 bits), Expect = 2.3e-90, Sum P(4) = 2.3e-90
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 757 WNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVR 809
WNP + I A + I + +V IYR VT+ SVEE + + AK+KM+L HLV++
Sbjct: 565 WNPCSCINACFLSLNILTKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQ 617
Score = 70 (29.7 bits), Expect = 2.3e-90, Sum P(4) = 2.3e-90
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 119 HNINDEELEKKYYRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWED 174
+N E + + +Y + E +IA+ N K+ G Y KW+ LPY + +WED
Sbjct: 49 YNCQQEFTDDLHKQYQVV-ERIIAHS--NQKSAA-GYPDYYCKWQGLPYSECSWED 100
Score = 68 (29.0 bits), Expect = 2.9e-13, Sum P(3) = 2.9e-13
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 594 EWLIANRVI---NSKTLRDGSTIYLVKWRDLPYDKATWED 630
++ + R+I N K+ G Y KW+ LPY + +WED
Sbjct: 62 QYQVVERIIAHSNQKSAA-GYPDYYCKWQGLPYSECSWED 100
>WB|WBGene00007053 [details] [associations]
symbol:chd-7 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00592
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR023780 KO:K14437 GeneTree:ENSGT00560000077077
EMBL:FO080504 EMBL:FO080107 RefSeq:NP_491426.2 PaxDb:O61845
EnsemblMetazoa:T04D1.4 GeneID:172079 KEGG:cel:CELE_T04D1.4
UCSC:T04D1.4 CTD:172079 WormBase:T04D1.4 HOGENOM:HOG000213105
InParanoid:O61845 OMA:LLAFRME NextBio:873933 Uniprot:O61845
Length = 2967
Score = 620 (223.3 bits), Expect = 1.2e-89, Sum P(4) = 1.2e-89
Identities = 134/309 (43%), Positives = 186/309 (60%)
Query: 246 GMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSA 305
G L YQ EG++WL Y + + ILADEMGLGKT+QTITFL ++ G GPFLV
Sbjct: 1194 GNSLREYQFEGVDWLLYCYYNAQNCILADEMGLGKTVQTITFLSRIYDYG-IHGPFLVVV 1252
Query: 306 PLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVK 365
PLSTI NW REFETW D + Y G R VL+ +++ + D + G K + + VK
Sbjct: 1253 PLSTIQNWVREFETWT-DMNAIVYHGSAYAREVLQQYEVFY-DKRHCGAK--NWKKNFVK 1308
Query: 366 FHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFF-KFLSGYSIQNKLLLTGT 424
L+T++E + +DV L I W V V+DEAHRLK+ K L + +++++LLTGT
Sbjct: 1309 IDALITTFETVVSDVEFLKKIPWRVCVIDEAHRLKNRNCKLLVNGLLAFRMEHRVLLTGT 1368
Query: 425 PXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVL 484
P P++F++ +F +F ++QV++L ++L P MLRRLK DV
Sbjct: 1369 PLQNNIDELFSLLNFLHPQQFDNSATFLEQFGSCQTDDQVQKLQEILKPMMLRRLKEDVE 1428
Query: 485 KNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPY 544
K++ K E I+ V+LS MQKK+Y+ IL RNF L G SL+N+MM+L+KCCNHP+
Sbjct: 1429 KSLGPKEETIIEVQLSDMQKKFYRAILERNFSHLCK--GTSAPSLMNVMMELRKCCNHPF 1486
Query: 545 LFPAAAEEA 553
L A EEA
Sbjct: 1487 LINGA-EEA 1494
Score = 325 (119.5 bits), Expect = 1.2e-89, Sum P(4) = 1.2e-89
Identities = 62/108 (57%), Positives = 80/108 (74%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M K+LD+LE++L Y +ERIDGN+ G +RQ +IDRF+ + +FVFLL TR+GGL
Sbjct: 1543 FSQMVKVLDLLEEFLISMSYPFERIDGNVRGDLRQAAIDRFSKENSDRFVFLLCTRAGGL 1602
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADT 749
GINL ADTVII+DSDWNP ND+QA +R HRIGQ+ K L T++T
Sbjct: 1603 GINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQKKLVKVYRLITSNT 1650
Score = 193 (73.0 bits), Expect = 7.6e-76, Sum P(4) = 7.6e-76
Identities = 38/92 (41%), Positives = 59/92 (64%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INL ADTVII+DSDWNP ND+QA +R HRIGQ+ V +YR +T N+ E + A K+
Sbjct: 1604 INLTAADTVIIFDSDWNPQNDLQAQARCHRIGQKKLVKVYRLITSNTYEREMFDKASLKL 1663
Query: 802 MLTHLVVRP--GMGGKQANFTKQELDDILRFG 831
L V++ + + +K++++++L+ G
Sbjct: 1664 GLDKAVLQSTTALKAEGTALSKKDVEELLKKG 1695
Score = 93 (37.8 bits), Expect = 3.0e-26, Sum P(5) = 3.0e-26
Identities = 19/59 (32%), Positives = 35/59 (59%)
Query: 594 EWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLD 652
+++I +RV++ T DG L+KW+ L Y++ TWE E IP + +E + +++D
Sbjct: 1112 DFVIVDRVVDLITEDDGQEFVLIKWKSLGYEEVTWEPI-EMIPA--DKVELWRERQVID 1167
Score = 86 (35.3 bits), Expect = 1.2e-89, Sum P(4) = 1.2e-89
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 138 EWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLK 183
+++I +RV++ T DG L+KW+ L Y++ TWE E IP K
Sbjct: 1112 DFVIVDRVVDLITEDDGQEFVLIKWKSLGYEEVTWEPI-EMIPADK 1156
Score = 49 (22.3 bits), Expect = 8.0e-22, Sum P(5) = 8.0e-22
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 614 YLVKWRDLPYDKATWEDENE--DIPGLKES-IEFYNMTKMLDILED 656
+L+KW+ Y W+ E +I E+ I+ + + KM +ED
Sbjct: 1060 FLIKWKGRSYVHCEWKTAAELLEIDKRVEAKIKRFKVKKMSSYIED 1105
Score = 47 (21.6 bits), Expect = 1.5e-85, Sum P(4) = 1.5e-85
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 213 SGSKPR-RYTPPPEKPTTDLRKKYEKQPPFLDDTGMQ 248
+G P+ +Y PPP+ P + ++ Y +Q G Q
Sbjct: 164 NGPPPQGQYPPPPQAPQ-NYQQMYHQQRAQQQQAGQQ 199
Score = 39 (18.8 bits), Expect = 1.2e-89, Sum P(4) = 1.2e-89
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 954 DVSRLPAT-LARIPPVAQRLHMSERSILSRL 983
D++ L T L + P + Q + +S+ SIL+ L
Sbjct: 2917 DINPLLLTALMQNPAILQSMMLSDPSILAAL 2947
Score = 39 (18.8 bits), Expect = 1.0e-84, Sum P(4) = 1.0e-84
Identities = 6/20 (30%), Positives = 10/20 (50%)
Query: 158 YLVKWRDLPYDKATWEDENE 177
+L+KW+ Y W+ E
Sbjct: 1060 FLIKWKGRSYVHCEWKTAAE 1079
Score = 38 (18.4 bits), Expect = 3.0e-26, Sum P(5) = 3.0e-26
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 441 TPEKFNDLTSFQAEFADISKEEQVK 465
TP K +D+ +F +EE+V+
Sbjct: 819 TPVKADDIENFAGVEETFGEEEEVQ 843
Score = 38 (18.4 bits), Expect = 2.4e-25, Sum P(4) = 2.4e-25
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 297 CKGPFLVSAPLSTIINWEREFETWAPDF 324
C PFL++ I+N +F PD+
Sbjct: 1482 CNHPFLINGAEEAIMN---DFRLAHPDW 1506
>ASPGD|ASPL0000052010 [details] [associations]
symbol:AN1255 species:162425 "Emericella nidulans"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0031934 "mating-type region
heterochromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0060303 "regulation of nucleosome density" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:BN001308 GO:GO:0003677 EMBL:AACD01000017
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
KO:K11367 HOGENOM:HOG000207917 OrthoDB:EOG4TF3TB RefSeq:XP_658859.1
ProteinModelPortal:Q5BDX5 STRING:Q5BDX5
EnsemblFungi:CADANIAT00001368 GeneID:2877029 KEGG:ani:AN1255.2
OMA:GPRRMAI Uniprot:Q5BDX5
Length = 1517
Score = 582 (209.9 bits), Expect = 1.5e-86, Sum P(3) = 1.5e-86
Identities = 138/366 (37%), Positives = 207/366 (56%)
Query: 232 RKKYEK---QPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFL 288
RK +E P FL + G QL +Q++G+N++ ++W +N + +LADEMGLGKT+QT+ F+
Sbjct: 428 RKPFEPIKGTPSFLHN-G-QLKEFQVKGVNFMAFNWVKNRNVVLADEMGLGKTVQTVAFI 485
Query: 289 YSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWED 348
L +GPF+V PLST+ +W F+ W+PD V Y G++ R VL+++++ +
Sbjct: 486 SWLRHVRRQQGPFVVVVPLSTMPSWAETFDNWSPDLNYVVYNGNEASRNVLKEYELMVD- 544
Query: 349 TANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFK 408
G P R KF+VLLT+YE + D + L W + VDEAHRLK+ S+ +
Sbjct: 545 -----GNPRR-----PKFNVLLTTYEYVLVDSSFLSQFNWQFMAVDEAHRLKNRDSQLYI 594
Query: 409 FLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLH 468
L ++ +LL+TGTP P L + A+ D++ E ++L
Sbjct: 595 KLQEFNSPARLLITGTPIQNNLAELSALLDFLNP----GLVNVDADM-DLNSEAASEKLA 649
Query: 469 DL---LGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQ 525
+L + P MLRR K V ++P K+E I+RVELS +Q +YYK ILT+N+ ALN GQ
Sbjct: 650 ELTKAISPFMLRRTKTKVESDLPPKTEKIIRVELSDVQLEYYKNILTKNYAALNEGTKGQ 709
Query: 526 QVSLLNIMMDLKKCCNHPYLFPAAAEEAPVQGGQYE---IQALTRAAGXXXXXXXXXXXX 582
+ SLLNIMM+LKK NHP++FP+A E ++G ++AL ++G
Sbjct: 710 KQSLLNIMMELKKASNHPFMFPSA-ETKILEGSTRREDVLRALITSSGKMMLLDQLLAKL 768
Query: 583 XEDGHR 588
DGHR
Sbjct: 769 KRDGHR 774
Score = 325 (119.5 bits), Expect = 1.5e-86, Sum P(3) = 1.5e-86
Identities = 62/109 (56%), Positives = 79/109 (72%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M KMLDIL DY++ GY Y+R+DG I + R+ +I+ +NAP +S F F+LSTR+GGL
Sbjct: 778 FSQMVKMLDILGDYMEYRGYTYQRLDGTIPSASRRLAIEHYNAPDSSDFAFILSTRAGGL 837
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV 750
GINL TADTVI++DSDWNP D+QA +RAHRIGQ L + DTV
Sbjct: 838 GINLMTADTVILFDSDWNPQADLQAMARAHRIGQTKPVSVYRLVSKDTV 886
Score = 218 (81.8 bits), Expect = 2.5e-75, Sum P(3) = 2.5e-75
Identities = 44/97 (45%), Positives = 65/97 (67%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
P + AF + R G INL TADTVI++DSDWNP D+QA +RAHRIGQ V +Y
Sbjct: 821 PDSSDFAFILSTRAGGLG--INLMTADTVILFDSDWNPQADLQAMARAHRIGQTKPVSVY 878
Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQAN 818
R V++++VEE V + A+ K++L + ++ G+ K+A+
Sbjct: 879 RLVSKDTVEEEVIERARNKLLLEFITIQRGVTDKEAS 915
Score = 86 (35.3 bits), Expect = 1.5e-86, Sum P(3) = 1.5e-86
Identities = 19/35 (54%), Positives = 21/35 (60%)
Query: 141 IANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDE 175
I RVI + DG T YLVKW+ L YD TWE E
Sbjct: 361 IVERVIAMREGEDG-TEYLVKWKRLFYDSCTWESE 394
Score = 86 (35.3 bits), Expect = 5.5e-28, Sum P(3) = 5.5e-28
Identities = 19/35 (54%), Positives = 21/35 (60%)
Query: 597 IANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDE 631
I RVI + DG T YLVKW+ L YD TWE E
Sbjct: 361 IVERVIAMREGEDG-TEYLVKWKRLFYDSCTWESE 394
Score = 47 (21.6 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 13/50 (26%), Positives = 26/50 (52%)
Query: 614 YLVKWRDLPYDKATWEDENEDIPGLKESIEFYN-MTKML--DILEDYLDG 660
+ +KW++ + ATWE E + + + N + K+L D+ +Y +G
Sbjct: 288 FYIKWQEKSHYHATWET-TESLANCRSTRRLDNYVRKVLAEDLRLNYDEG 336
Score = 44 (20.5 bits), Expect = 3.8e-82, Sum P(3) = 3.8e-82
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 158 YLVKWRDLPYDKATWE 173
+ +KW++ + ATWE
Sbjct: 288 FYIKWQEKSHYHATWE 303
Score = 37 (18.1 bits), Expect = 2.3e-56, Sum P(3) = 2.3e-56
Identities = 16/52 (30%), Positives = 22/52 (42%)
Query: 609 DGSTIYL--VKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDYL 658
DG +L + D+ D TW+D IP KE +E + E YL
Sbjct: 984 DGGEEFLKAFDYVDIKVDDLTWDDI---IP--KEQLEEIKAEEKKKADEKYL 1030
>DICTYBASE|DDB_G0293012 [details] [associations]
symbol:DDB_G0293012 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR000626
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00213 SMART:SM00298
SMART:SM00490 dictyBase:DDB_G0293012 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006357 GO:GO:0004003
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
EMBL:AAFI02000199 InterPro:IPR022617 Pfam:PF11976
RefSeq:XP_629261.1 ProteinModelPortal:Q54CF8
EnsemblProtists:DDB0220643 GeneID:8628981 KEGG:ddi:DDB_G0293012
InParanoid:Q54CF8 OMA:IMINEDI Uniprot:Q54CF8
Length = 3071
Score = 558 (201.5 bits), Expect = 3.4e-84, Sum P(3) = 3.4e-84
Identities = 137/393 (34%), Positives = 208/393 (52%)
Query: 240 PFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKG 299
P D + L +Q+EG WL Y W ++LADEMGLGKTIQ+I FL L + KG
Sbjct: 890 PKFQDN-LSLKEFQVEGFLWLSYCWYHCRSSLLADEMGLGKTIQSIAFLQYLSQSVGIKG 948
Query: 300 PFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRI 359
PFLV APLST+ NW +E W +V Y G ++ R + ++ +DT
Sbjct: 949 PFLVVAPLSTLGNWHKEILKWTKMKTLVFY-GSQETRGFISKYEFKHKDT---------- 997
Query: 360 RSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKL 419
F VLLT+YE I +D + + W L++DE HR+K+++SK L ++ +
Sbjct: 998 ----YLFEVLLTTYETIMSDHSSFVRVPWRALILDEGHRIKNDKSKVLSKLKSIKTEHSI 1053
Query: 420 LLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRL 479
+LTGTP P+KFN F E++D+ +E QV +LH LL P++LRR+
Sbjct: 1054 ILTGTPLQNDMKELWTMLNFLDPDKFNSCQEFLDEYSDLKEESQVSKLHQLLSPYLLRRM 1113
Query: 480 KADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSL---LNIMMDL 536
K DV ++P K E +++VELS QK YY+ IL RN E L+ +G Q+ +L NIM+ +
Sbjct: 1114 KEDVELSIPIKEETVIQVELSSTQKTYYRAILERNREFLS-RGIKQKTNLPKLSNIMIQI 1172
Query: 537 KKCCNHPYLFPAAAEEAPVQ---GGQYEI-QALTRAAGXXXXXXXXXXXXXEDGHRYGIK 592
+K CNHP+L P A E Q G E+ + L +++ +GH+
Sbjct: 1173 RKVCNHPFLIPGAEESIVKQEKIAGDEELGELLVKSSSKLVLVDKLLQRLKAEGHQV--- 1229
Query: 593 PEWLIANRVINSKTLRDGSTIYLVKWRDLPYDK 625
LI ++++ S + + YL ++R+ Y++
Sbjct: 1230 ---LIFSQMVESLNILED---YL-QYREYTYER 1255
Score = 328 (120.5 bits), Expect = 3.4e-84, Sum P(3) = 3.4e-84
Identities = 65/108 (60%), Positives = 80/108 (74%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M + L+ILEDYL Y YER+DG+I +RQ SIDRF GA++FVFLLSTR+GG+
Sbjct: 1232 FSQMVESLNILEDYLQYREYTYERLDGSIKSEVRQASIDRFQDKGANRFVFLLSTRAGGV 1291
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADT 749
GINL TADTVI++DSDWNP +D+QA +R HRIGQ N K L T +T
Sbjct: 1292 GINLTTADTVILFDSDWNPQSDLQAQARCHRIGQTNNVKVYRLITRNT 1339
Score = 231 (86.4 bits), Expect = 5.1e-74, Sum P(3) = 5.1e-74
Identities = 42/79 (53%), Positives = 57/79 (72%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INL TADTVI++DSDWNP +D+QA +R HRIGQ N V +YR +TRN+ EE + + A +K+
Sbjct: 1293 INLTTADTVILFDSDWNPQSDLQAQARCHRIGQTNNVKVYRLITRNTYEEYLFECATKKL 1352
Query: 802 MLTHLVVRPGMGGKQANFT 820
+L H+V+ KQ N T
Sbjct: 1353 LLDHIVLSTNKDKKQTNTT 1371
Score = 102 (41.0 bits), Expect = 3.4e-84, Sum P(3) = 3.4e-84
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 125 ELEKKYYRYGIKPEWLIANRVINSKTLRDG-----STIYLVKWRDLPYDKATWEDEN 176
E E + Y P+ + +++ K + G +T YL KW+ LP++K+TWEDEN
Sbjct: 792 ESEANPFNY-FSPDCTVIEKILAKKETKAGKSKKMTTFYLCKWKTLPHEKSTWEDEN 847
Score = 98 (39.6 bits), Expect = 2.8e-29, Sum P(2) = 2.8e-29
Identities = 21/65 (32%), Positives = 38/65 (58%)
Query: 593 PEWLIANRVINSKTLRDG-----STIYLVKWRDLPYDKATWEDENEDIPGLKES-IEFYN 646
P+ + +++ K + G +T YL KW+ LP++K+TWEDEN I ++ I+ +N
Sbjct: 803 PDCTVIEKILAKKETKAGKSKKMTTFYLCKWKTLPHEKSTWEDENILITEEDQAAIKQFN 862
Query: 647 MTKML 651
++L
Sbjct: 863 ANQLL 867
>TAIR|locus:2116747 [details] [associations]
symbol:PKR2 "PICKLE RELATED 2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 EMBL:CP002687
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00523018 RefSeq:NP_194918.2 UniGene:At.54572
ProteinModelPortal:F4JTF6 SMR:F4JTF6 PRIDE:F4JTF6
EnsemblPlants:AT4G31900.1 GeneID:829320 KEGG:ath:AT4G31900
OMA:SYWESES ArrayExpress:F4JTF6 Uniprot:F4JTF6
Length = 1202
Score = 518 (187.4 bits), Expect = 7.9e-82, Sum P(5) = 7.9e-82
Identities = 115/290 (39%), Positives = 163/290 (56%)
Query: 300 PFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRI 359
P LV APLSTI NWEREF TWAP VV Y GD + R V+ +H+ + + G
Sbjct: 274 PHLVVAPLSTIRNWEREFATWAPHMNVVMYTGDSEARDVIWEHEFYFSE-----G----- 323
Query: 360 RSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKL 419
R S KF VLLT+YE++ +++L I+W +++DE HRLK+ +SK + LS ++ ++ +
Sbjct: 324 RKS--KFDVLLTTYEMVHPGISVLSPIKWTCMIIDEGHRLKNQKSKLYSSLSQFTSKHIV 381
Query: 420 LLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRL 479
LLTGTP +KF L FQ DI+KEEQ+ RLH +L PH+LRRL
Sbjct: 382 LLTGTPLQNNLNELFALMHFLDADKFGSLEKFQ----DINKEEQISRLHQMLAPHLLRRL 437
Query: 480 KADVLKN-MPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKK 538
K DVLK+ +P K E I+RV++S QK+ YK ++T N++ L K + + N++M L++
Sbjct: 438 KKDVLKDKVPPKKELILRVDMSSQQKEVYKAVITNNYQVLTKK---RDAKISNVLMKLRQ 494
Query: 539 CCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHR 588
C+HPYL P E + L A+G E GHR
Sbjct: 495 VCSHPYLLPDF--EPRFEDANEAFTKLLEASGKLQLLDKMMVKLKEQGHR 542
Score = 466 (169.1 bits), Expect = 1.8e-75, Sum P(5) = 1.8e-75
Identities = 107/249 (42%), Positives = 147/249 (59%)
Query: 204 ELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYS 263
E+Q +D S S+ +Y E+ + K+++ P FL T LH YQLEG+N+LRYS
Sbjct: 185 EIQRFKDINSSSRRDKYVEN-ERNREEF-KQFDLTPEFLTGT---LHTYQLEGLNFLRYS 239
Query: 264 WGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPD 323
W + + ILADEMGLGKTIQ+I FL SLF+E P LV APLSTI NWEREF TWAP
Sbjct: 240 WSKKTNVILADEMGLGKTIQSIAFLASLFEEN--LSPHLVVAPLSTIRNWEREFATWAPH 297
Query: 324 FYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALL 383
VV Y GD + R V+ +H+ + + G R S KF VLLT+YE++ +++L
Sbjct: 298 MNVVMYTGDSEARDVIWEHEFYFSE----G------RKS--KFDVLLTTYEMVHPGISVL 345
Query: 384 GSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPE 443
I+W +++DE HRLK+ +SK + LS ++ ++ +LLTGTP +
Sbjct: 346 SPIKWTCMIIDEGHRLKNQKSKLYSSLSQFTSKHIVLLTGTPLQNNLNELFALMHFLDAD 405
Query: 444 KFNDLTSFQ 452
KF L FQ
Sbjct: 406 KFGSLEKFQ 414
Score = 321 (118.1 bits), Expect = 7.9e-82, Sum P(5) = 7.9e-82
Identities = 60/90 (66%), Positives = 72/90 (80%)
Query: 651 LDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATA 710
L +LEDY + + YERIDG I+G RQ IDRFNA +++F FLLSTR+GG+GINLATA
Sbjct: 553 LYLLEDYFTFKNWNYERIDGKISGPERQVRIDRFNAENSNRFCFLLSTRAGGIGINLATA 612
Query: 711 DTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
DTVIIYDSDWNPH D+QA +R HR+GQ NK
Sbjct: 613 DTVIIYDSDWNPHADLQAMARVHRLGQTNK 642
Score = 285 (105.4 bits), Expect = 4.3e-78, Sum P(5) = 4.3e-78
Identities = 55/91 (60%), Positives = 71/91 (78%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATADTVIIYDSDWNPH D+QA +R HR+GQ NKVMIYR + + +VEER+ ++ K KM
Sbjct: 607 INLATADTVIIYDSDWNPHADLQAMARVHRLGQTNKVMIYRLIHKGTVEERMMEITKNKM 666
Query: 802 MLTHLVVRPGMGGKQANFTKQELDDILRFGT 832
+L HLVV GKQ + + ELDDI+++G+
Sbjct: 667 LLEHLVV-----GKQ-HLCQDELDDIIKYGS 691
Score = 114 (45.2 bits), Expect = 1.8e-29, Sum P(5) = 1.8e-29
Identities = 43/183 (23%), Positives = 85/183 (46%)
Query: 584 EDG-HRY-GIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKES 641
E+G H + I+PEW +R+I + DG YLVK+++L Y + WE E+ DI +
Sbjct: 128 ENGAHEFIAIRPEWKTVDRIIACREGDDGEE-YLVKYKELSYRNSYWESES-DISDFQNE 185
Query: 642 IEFY---NMTKMLD-ILEDYLDGEGYK-YERIDGNITGSMRQESIDRFN--APGASQFVF 694
I+ + N + D +E+ + E +K ++ +TG++ ++ N S+
Sbjct: 186 IQRFKDINSSSRRDKYVENERNREEFKQFDLTPEFLTGTLHTYQLEGLNFLRYSWSKKTN 245
Query: 695 LLSTRSGGLGINLAT-ADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIY 753
++ GLG + + A +++ + +PH + S + ++ A V++Y
Sbjct: 246 VILADEMGLGKTIQSIAFLASLFEENLSPHLVVAPLSTIRN--WEREFATWAPHMNVVMY 303
Query: 754 DSD 756
D
Sbjct: 304 TGD 306
Score = 94 (38.1 bits), Expect = 7.9e-82, Sum P(5) = 7.9e-82
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 135 IKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIE 187
I+PEW +R+I + DG YLVK+++L Y + WE E+ DI + I+
Sbjct: 137 IRPEWKTVDRIIACREGDDGEE-YLVKYKELSYRNSYWESES-DISDFQNEIQ 187
Score = 59 (25.8 bits), Expect = 7.9e-82, Sum P(5) = 7.9e-82
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 855 NQD-PAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQ 889
N D ++W LL+ YE Q + LGK KR KQ
Sbjct: 774 NADRTSHWKDLLKDKYEVQQAEELSALGKRKRNGKQ 809
Score = 56 (24.8 bits), Expect = 7.0e-78, Sum P(5) = 7.0e-78
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 158 YLVKWRDLPYDKATWEDENE 177
YLVKW+ L Y +W E E
Sbjct: 79 YLVKWKGLSYLHCSWVPEQE 98
Score = 56 (24.8 bits), Expect = 5.4e-26, Sum P(4) = 5.4e-26
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 614 YLVKWRDLPYDKATWEDENE 633
YLVKW+ L Y +W E E
Sbjct: 79 YLVKWKGLSYLHCSWVPEQE 98
Score = 39 (18.8 bits), Expect = 7.9e-82, Sum P(5) = 7.9e-82
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 919 SKQERDRPLPPLLARVG-GNIEVLNQLEEL 947
SK+E DR L P +++ G G + + EE+
Sbjct: 1012 SKEEHDRILIPAVSKHGYGRWVAIVEDEEI 1041
>UNIPROTKB|I3LTT5 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 EMBL:CU695129
Ensembl:ENSSSCT00000027860 Uniprot:I3LTT5
Length = 778
Score = 545 (196.9 bits), Expect = 2.0e-80, Sum P(2) = 2.0e-80
Identities = 122/333 (36%), Positives = 182/333 (54%)
Query: 226 KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTI 285
+ T+++ ++E P ++ G L YQ+ G+NWL + ++ ILADEMGLGKT+QTI
Sbjct: 165 RKTSNVCVRFEVSPSYVK--GGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTI 222
Query: 286 TFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRDHDI 344
L L + GP +V P ST+ NW EF+ W P V+ +VGDKD R +RD +
Sbjct: 223 ALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMM 282
Query: 345 SWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQS 404
E + V +TSYE++ + ++ W LV+DEAHR+K+ +S
Sbjct: 283 PGE------------------WDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKS 324
Query: 405 KFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFAD---ISKE 461
K + + + N+LLLTGTP P+ FN F + F + +
Sbjct: 325 KLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQ 384
Query: 462 EQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPK 521
+ V+RLH +L P +LRR+K DV K++P K E + + LS MQ+++Y IL ++ + LN
Sbjct: 385 KLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSA 444
Query: 522 GGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAP 554
G ++ LLNI+M L+KCCNHPYLF A E P
Sbjct: 445 GKMDKMRLLNILMQLRKCCNHPYLFDGA-EPGP 476
Score = 324 (119.1 bits), Expect = 2.0e-80, Sum P(2) = 2.0e-80
Identities = 68/141 (48%), Positives = 91/141 (64%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MT++LDILEDY GY+Y R+DG R+E+I+ FN P +S+F+F+LSTR+GGL
Sbjct: 511 FSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFNVPNSSRFIFMLSTRAGGL 570
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV---IIYDSDWN 758
GINLA+AD VI+YDSDWNP D+QA RAHRIGQ+ + L T +TV I+ ++
Sbjct: 571 GINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIK 630
Query: 759 PHNDIQAFSRAHRIGQQNKVM 779
D + I QQ+ M
Sbjct: 631 LRLDSIVIQQGRLIDQQSNKM 651
Score = 225 (84.3 bits), Expect = 5.6e-70, Sum P(2) = 5.6e-70
Identities = 44/92 (47%), Positives = 66/92 (71%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLA+AD VI+YDSDWNP D+QA RAHRIGQ+ V ++R +T N+VEER+ + A+ K+
Sbjct: 572 INLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKL 631
Query: 802 MLTHLVVRPG-MGGKQAN-FTKQELDDILRFG 831
L +V++ G + +Q+N K+E+ ++R G
Sbjct: 632 RLDSIVIQQGRLIDQQSNKMAKEEMLQMIRHG 663
>MGI|MGI:1935127 [details] [associations]
symbol:Smarca1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000733 "DNA strand renaturation" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0007420 "brain
development" evidence=ISO;IMP] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016589 "NURF complex" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0036310 "annealing helicase activity" evidence=ISO] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070615 "nucleosome-dependent ATPase activity" evidence=ISO]
[GO:0090537 "CERF complex" evidence=ISO] [GO:2000177 "regulation of
neural precursor cell proliferation" evidence=IGI;IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 MGI:MGI:1935127 GO:GO:0005524 GO:GO:0005634
GO:GO:0045893 GO:GO:0007420 GO:GO:0030182 GO:GO:0003677
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016589 GO:GO:0036310 GO:GO:0008094
GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 SUPFAM:SSF101224
CTD:6594 HOVERGEN:HBG056329 KO:K11727 EMBL:AF325920 EMBL:AK030741
EMBL:AL671903 EMBL:BC057115 IPI:IPI00314654 IPI:IPI00761324
RefSeq:NP_444353.3 UniGene:Mm.229151 HSSP:Q24368
ProteinModelPortal:Q6PGB8 SMR:Q6PGB8 STRING:Q6PGB8
PhosphoSite:Q6PGB8 PaxDb:Q6PGB8 PRIDE:Q6PGB8
Ensembl:ENSMUST00000077569 Ensembl:ENSMUST00000088973
Ensembl:ENSMUST00000101616 GeneID:93761 KEGG:mmu:93761
UCSC:uc009tbl.2 UCSC:uc009tbm.2 InParanoid:B1AUP6 OrthoDB:EOG44J2H9
NextBio:351647 Bgee:Q6PGB8 Genevestigator:Q6PGB8
GermOnline:ENSMUSG00000031099 Uniprot:Q6PGB8
Length = 1046
Score = 545 (196.9 bits), Expect = 8.6e-80, Sum P(2) = 8.6e-80
Identities = 122/333 (36%), Positives = 182/333 (54%)
Query: 226 KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTI 285
+ T+++ ++E P ++ G L YQ+ G+NWL + ++ ILADEMGLGKT+QTI
Sbjct: 166 RKTSNVCVRFEVSPSYVK--GGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTI 223
Query: 286 TFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRDHDI 344
L L + GP +V P ST+ NW EF+ W P V+ +VGDKD R +RD +
Sbjct: 224 ALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIRDEMM 283
Query: 345 SWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQS 404
E + V +TSYE++ + ++ W LV+DEAHR+K+ +S
Sbjct: 284 PGE------------------WDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKS 325
Query: 405 KFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFAD---ISKE 461
K + + + N+LLLTGTP P+ FN F + F + +
Sbjct: 326 KLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQ 385
Query: 462 EQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPK 521
+ V+RLH +L P +LRR+K DV K++P K E + + LS MQ+++Y IL ++ + LN
Sbjct: 386 KLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSS 445
Query: 522 GGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAP 554
G ++ LLNI+M L+KCCNHPYLF A E P
Sbjct: 446 GKMDKMRLLNILMQLRKCCNHPYLFDGA-EPGP 477
Score = 359 (131.4 bits), Expect = 2.8e-47, Sum P(2) = 2.8e-47
Identities = 91/308 (29%), Positives = 148/308 (48%)
Query: 365 KFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGT 424
++ V +TSYE++ + ++ W LV+DEAHR+K+ +SK + + + N+LLLTGT
Sbjct: 286 EWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGT 345
Query: 425 PXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFAD---ISKEEQVKRLHDLLGPHMLRRLKA 481
P P+ FN F + F + ++ V+RLH +L P +LRR+K
Sbjct: 346 PLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKT 405
Query: 482 DVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCN 541
DV K++P K E + + LS MQ+++Y IL ++ + LN G ++ LLNI+M L+KCCN
Sbjct: 406 DVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCN 465
Query: 542 HPYLFPAAAEEAPVQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHRYGIKPEWLIANRV 601
HPYLF A P ++ + +G E G R I + R+
Sbjct: 466 HPYLFDGAEPGPPYTTDEH----IVGNSGKMVALDKLLARIKEQGSRVLIFSQM---TRL 518
Query: 602 INSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDYLDGE 661
++ L D Y + WR Y + + +E+ ++ N +K + +L G
Sbjct: 519 LD--ILED----YCM-WRGYEYSRLDGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGL 571
Query: 662 GYKYERID 669
G D
Sbjct: 572 GINLASAD 579
Score = 335 (123.0 bits), Expect = 8.6e-80, Sum P(2) = 8.6e-80
Identities = 64/109 (58%), Positives = 81/109 (74%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MT++LDILEDY GY+Y R+DG R+E+ID FNAP +S+F+F+LSTR+GGL
Sbjct: 512 FSQMTRLLDILEDYCMWRGYEYSRLDGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGL 571
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV 750
GINLA+AD VI+YDSDWNP D+QA RAHRIGQ+ + L T +TV
Sbjct: 572 GINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTV 620
Score = 225 (84.3 bits), Expect = 3.4e-68, Sum P(2) = 3.4e-68
Identities = 44/92 (47%), Positives = 66/92 (71%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLA+AD VI+YDSDWNP D+QA RAHRIGQ+ V ++R +T N+VEER+ + A+ K+
Sbjct: 573 INLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKL 632
Query: 802 MLTHLVVRPG-MGGKQAN-FTKQELDDILRFG 831
L +V++ G + +Q+N K+E+ ++R G
Sbjct: 633 RLDSIVIQQGRLIDQQSNKLAKEEMLQMIRHG 664
>UNIPROTKB|K7GNV1 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
GeneID:100188905 RefSeq:XP_003360492.1 Ensembl:ENSSSCT00000032734
Uniprot:K7GNV1
Length = 1061
Score = 545 (196.9 bits), Expect = 1.4e-78, Sum P(2) = 1.4e-78
Identities = 122/333 (36%), Positives = 182/333 (54%)
Query: 226 KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTI 285
+ T+++ ++E P ++ G L YQ+ G+NWL + ++ ILADEMGLGKT+QTI
Sbjct: 165 RKTSNVCVRFEVSPSYVK--GGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTI 222
Query: 286 TFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRDHDI 344
L L + GP +V P ST+ NW EF+ W P V+ +VGDKD R +RD +
Sbjct: 223 ALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMM 282
Query: 345 SWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQS 404
E + V +TSYE++ + ++ W LV+DEAHR+K+ +S
Sbjct: 283 PGE------------------WDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKS 324
Query: 405 KFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFAD---ISKE 461
K + + + N+LLLTGTP P+ FN F + F + +
Sbjct: 325 KLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQ 384
Query: 462 EQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPK 521
+ V+RLH +L P +LRR+K DV K++P K E + + LS MQ+++Y IL ++ + LN
Sbjct: 385 KLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSA 444
Query: 522 GGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAP 554
G ++ LLNI+M L+KCCNHPYLF A E P
Sbjct: 445 GKMDKMRLLNILMQLRKCCNHPYLFDGA-EPGP 476
Score = 324 (119.1 bits), Expect = 1.4e-78, Sum P(2) = 1.4e-78
Identities = 68/141 (48%), Positives = 91/141 (64%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MT++LDILEDY GY+Y R+DG R+E+I+ FN P +S+F+F+LSTR+GGL
Sbjct: 511 FSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFNVPNSSRFIFMLSTRAGGL 570
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV---IIYDSDWN 758
GINLA+AD VI+YDSDWNP D+QA RAHRIGQ+ + L T +TV I+ ++
Sbjct: 571 GINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIK 630
Query: 759 PHNDIQAFSRAHRIGQQNKVM 779
D + I QQ+ M
Sbjct: 631 LRLDSIVIQQGRLIDQQSNKM 651
Score = 225 (84.3 bits), Expect = 3.7e-68, Sum P(2) = 3.7e-68
Identities = 44/92 (47%), Positives = 66/92 (71%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLA+AD VI+YDSDWNP D+QA RAHRIGQ+ V ++R +T N+VEER+ + A+ K+
Sbjct: 572 INLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKL 631
Query: 802 MLTHLVVRPG-MGGKQAN-FTKQELDDILRFG 831
L +V++ G + +Q+N K+E+ ++R G
Sbjct: 632 RLDSIVIQQGRLIDQQSNKMAKEEMLQMIRHG 663
>UNIPROTKB|F1P3Q4 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007420 "brain development" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0016589 "NURF
complex" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0036310 "annealing helicase activity"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044
GO:GO:0016589 GO:GO:0008094 GeneTree:ENSGT00680000100002
SUPFAM:SSF101224 OMA:PMSQKRK EMBL:AADN02013587 EMBL:AADN02013588
IPI:IPI00594974 Ensembl:ENSGALT00000013737 Uniprot:F1P3Q4
Length = 982
Score = 532 (192.3 bits), Expect = 1.8e-78, Sum P(2) = 1.8e-78
Identities = 120/333 (36%), Positives = 182/333 (54%)
Query: 226 KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTI 285
+ T+++ ++E+ P ++ G L YQ+ G+NW+ + ++ ILADEMGLGKT+QTI
Sbjct: 86 RKTSNVCIRFEESPSYVK--GGTLRDYQVRGLNWMISLYENGVNGILADEMGLGKTLQTI 143
Query: 286 TFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRDHDI 344
L L + GP +V P ST+ NW EF+ W P V +GDKD R +RD +
Sbjct: 144 ALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRAVCLIGDKDARAAFIRDVMM 203
Query: 345 SWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQS 404
E + V +TSYE++ + ++ W LV+DEAHR+K+ +S
Sbjct: 204 PGE------------------WDVCVTSYEMVIKEKSVFKKFNWRYLVIDEAHRIKNEKS 245
Query: 405 KFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFAD---ISKE 461
K + + + N+LLLTGTP P+ FN F + F + +
Sbjct: 246 KLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQ 305
Query: 462 EQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPK 521
+ V+RLH +L P +LRR+KA+V K++P K E + + LS MQ+++Y IL ++ + LN
Sbjct: 306 KLVERLHAVLKPFLLRRIKAEVEKSLPPKKEVKIYLGLSKMQREWYTRILMKDIDILNSA 365
Query: 522 GGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAP 554
G ++ LLNI+M L+KCCNHPYLF A E P
Sbjct: 366 GKMDKMRLLNILMQLRKCCNHPYLFDGA-EPGP 397
Score = 335 (123.0 bits), Expect = 1.8e-78, Sum P(2) = 1.8e-78
Identities = 65/109 (59%), Positives = 81/109 (74%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MT++LDILEDY GY+Y R+DG R+E+ID FNAP +S+F+F+LSTR+GGL
Sbjct: 432 FSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIDTFNAPNSSKFIFMLSTRAGGL 491
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV 750
GINLATAD VI+YDSDWNP D+QA RAHRIGQ+ + L T +TV
Sbjct: 492 GINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTV 540
Score = 227 (85.0 bits), Expect = 4.3e-67, Sum P(2) = 4.3e-67
Identities = 45/92 (48%), Positives = 65/92 (70%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATAD VI+YDSDWNP D+QA RAHRIGQ+ V ++R +T N+VEER+ + A+ K+
Sbjct: 493 INLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKL 552
Query: 802 MLTHLVVRPG-MGGKQAN-FTKQELDDILRFG 831
L +V++ G + +Q+N K E+ ++R G
Sbjct: 553 RLDSIVIQQGRLIDQQSNKLAKDEMLQMIRHG 584
>ZFIN|ZDB-GENE-070705-296 [details] [associations]
symbol:si:dkey-148b12.1 "si:dkey-148b12.1"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 ZFIN:ZDB-GENE-070705-296 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 HOVERGEN:HBG056329 KO:K11727 OrthoDB:EOG44J2H9
EMBL:CR848717 EMBL:CU104724 IPI:IPI00488326 RefSeq:NP_001093467.1
UniGene:Dr.81160 SMR:A5WUY4 Ensembl:ENSDART00000020725
GeneID:559803 KEGG:dre:559803 OMA:IGHAWIN NextBio:20883144
Uniprot:A5WUY4
Length = 1036
Score = 512 (185.3 bits), Expect = 2.2e-77, Sum P(2) = 2.2e-77
Identities = 116/309 (37%), Positives = 169/309 (54%)
Query: 249 LHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLS 308
L YQ+ G+NW+ + I+ ILADEMGLGKT+QTI L L + GP +V P S
Sbjct: 143 LRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 202
Query: 309 TIINWEREFETWAPDFYVVTYVGDKDCRIV-LRDHDISWEDTANRGGKPCRIRSSTVKFH 367
T+ NW EF+ W P V +G+KD R +RD + E +
Sbjct: 203 TLHNWMNEFKRWVPTLKAVCLIGNKDERAAFIRDVMMPGE------------------WD 244
Query: 368 VLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXX 427
V +TSYE++ + ++ W LV+DEAHR+K+ +SK + + N+LLLTGTP
Sbjct: 245 VCVTSYEMVIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIAREFKTTNRLLLTGTPLQ 304
Query: 428 XXXXXXXXXXXXXTPEKFNDLTSFQAEFAD--ISKEEQVKRLHDLLGPHMLRRLKADVLK 485
P+ FN + F + F + ++ V+RLH +L P +LRR+KA+V K
Sbjct: 305 NNLHELWSLLNFLLPDVFNSASDFDSWFDTNCLGDQKLVERLHAVLRPFLLRRIKAEVEK 364
Query: 486 NMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYL 545
++P K E + + LS MQ+++Y IL ++ + LN G ++ LLNI+M L+KCCNHPYL
Sbjct: 365 SLPPKKEVKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYL 424
Query: 546 FPAAAEEAP 554
F A E P
Sbjct: 425 FDGA-EPGP 432
Score = 348 (127.6 bits), Expect = 2.2e-77, Sum P(2) = 2.2e-77
Identities = 72/140 (51%), Positives = 94/140 (67%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MT++LDILEDY G++Y R+DGN R+++ID FNAP +S+F+F+LSTR+GGL
Sbjct: 467 FSQMTRVLDILEDYCMWRGFEYCRLDGNTPHEAREQAIDAFNAPNSSKFIFMLSTRAGGL 526
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV---IIYDSDWN 758
GINLATAD VI+YDSDWNP D+QA RAHRIGQ+ K L T +TV I+ ++
Sbjct: 527 GINLATADVVILYDSDWNPQVDLQAMDRAHRIGQRKPVKVFRLITDNTVEERIVERAEMK 586
Query: 759 PHNDIQAFSRAHRIGQQNKV 778
D + I QQNK+
Sbjct: 587 LRLDSIVIQQGRLIDQQNKL 606
Score = 227 (85.0 bits), Expect = 1.3e-64, Sum P(2) = 1.3e-64
Identities = 44/91 (48%), Positives = 63/91 (69%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATAD VI+YDSDWNP D+QA RAHRIGQ+ V ++R +T N+VEER+ + A+ K+
Sbjct: 528 INLATADVVILYDSDWNPQVDLQAMDRAHRIGQRKPVKVFRLITDNTVEERIVERAEMKL 587
Query: 802 MLTHLVVRPG-MGGKQANFTKQELDDILRFG 831
L +V++ G + +Q K E+ ++R G
Sbjct: 588 RLDSIVIQQGRLIDQQNKLGKDEMLQMIRHG 618
>UNIPROTKB|E1C0M8 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IEA] [GO:0000793 "condensed
chromosome" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005677 "chromatin
silencing complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0009790 "embryo development" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0031213 "RSF complex" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0043596 "nuclear replication fork"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043596 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
GO:GO:0016589 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:EDYCHWR GO:GO:0031213 EMBL:AADN02016239 EMBL:AADN02016240
IPI:IPI00577188 Ensembl:ENSGALT00000016121 ArrayExpress:E1C0M8
Uniprot:E1C0M8
Length = 1038
Score = 533 (192.7 bits), Expect = 2.3e-77, Sum P(2) = 2.3e-77
Identities = 124/331 (37%), Positives = 183/331 (55%)
Query: 228 TTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITF 287
TT++ ++E+ P ++ G +L YQ+ G+NWL + I+ ILADEMGLGKT+QTI+
Sbjct: 146 TTNVCTRFEESPSYVK-WG-KLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISL 203
Query: 288 LYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRDHDISW 346
L + + GP +V P ST+ NW EF+ W P V +GDKD R +RD +
Sbjct: 204 LGYMKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPTLRAVCLIGDKDQRAAFVRDVLLPG 263
Query: 347 EDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKF 406
E + V +TSYE++ + ++ W LV+DEAHR+K+ +SK
Sbjct: 264 E------------------WDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKL 305
Query: 407 FKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFAD---ISKEEQ 463
+ + + N+LLLTGTP P+ FN F + F + ++
Sbjct: 306 SEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDQKL 365
Query: 464 VKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGG 523
V+RLH +L P +LRR+KADV K++P K E + V LS MQ+++Y IL ++ + LN G
Sbjct: 366 VERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGK 425
Query: 524 GQQVSLLNIMMDLKKCCNHPYLFPAAAEEAP 554
++ LLNI+M L+KCCNHPYLF A E P
Sbjct: 426 LDKMRLLNILMQLRKCCNHPYLFDGA-EPGP 455
Score = 325 (119.5 bits), Expect = 2.3e-77, Sum P(2) = 2.3e-77
Identities = 82/203 (40%), Positives = 118/203 (58%)
Query: 635 IPGLKES----IEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGAS 690
+P LKE + F MT++LDILEDY Y+Y R+DG RQ SI+ +N PG+S
Sbjct: 477 LPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQASINAYNEPGSS 536
Query: 691 QFVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTV 750
+FVF+LSTR+GGLGINLATAD VI+YDSDWNP D+QA RAHRIGQ K + V
Sbjct: 537 KFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQ-TKTVR------V 589
Query: 751 IIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM--MLTHLVV 808
+ +D N + + RA + + ++I + V++ + ++ K +M M+ H
Sbjct: 590 FRFITD-NTVEE-RIVERAEMKLRLDSIVIQQ---GRLVDQNLNKLGKDEMLQMIRHGAT 644
Query: 809 RPGMGGKQANFTKQELDDILRFG 831
K++ T +++D IL G
Sbjct: 645 HV-FASKESEITDEDIDHILERG 666
>TAIR|locus:2182978 [details] [associations]
symbol:CHR17 "chromatin remodeling factor17" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005829 "cytosol" evidence=RCA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] [GO:0006259 "DNA metabolic
process" evidence=RCA] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0016246 "RNA interference" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0031047
"gene silencing by RNA" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=IGI] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 EMBL:CP002688 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 GO:GO:0010228 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 KO:K11654 OMA:MQRKWYK SUPFAM:SSF101224
IPI:IPI00547773 RefSeq:NP_850847.1 UniGene:At.19176
ProteinModelPortal:F4JY25 SMR:F4JY25 IntAct:F4JY25 PRIDE:F4JY25
EnsemblPlants:AT5G18620.2 GeneID:831980 KEGG:ath:AT5G18620
PhylomeDB:F4JY25 Uniprot:F4JY25
Length = 1072
Score = 515 (186.3 bits), Expect = 2.9e-76, Sum P(2) = 2.9e-76
Identities = 119/316 (37%), Positives = 172/316 (54%)
Query: 248 QLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPL 307
+L YQL G+NWL + I+ ILADEMGLGKT+QTI+ L L + GP +V AP
Sbjct: 193 KLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVAPK 252
Query: 308 STIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFH 367
ST+ NW E + P V ++G+ + R +R E+ G KF
Sbjct: 253 STLGNWMNEIRRFCPVLRAVKFLGNPEERRHIR------EELLVAG-----------KFD 295
Query: 368 VLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXX 427
+ +TS+E+ + L W +++DEAHR+K+ S K + +S +LL+TGTP
Sbjct: 296 ICVTSFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQ 355
Query: 428 XXXXXXXXXXXXXTPEKFNDLTSFQAEF---ADISKEEQVKRLHDLLGPHMLRRLKADVL 484
PE F+ +F F + ++E V++LH +L P +LRRLK+DV
Sbjct: 356 NNLHELWALLNFLLPEVFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVE 415
Query: 485 KNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPY 544
K +P K E I++V +S MQK+YYK +L ++ E +N GGG++ LLNI M L+KCCNHPY
Sbjct: 416 KGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVN--GGGERKRLLNIAMQLRKCCNHPY 473
Query: 545 LFPAAAEEAPVQGGQY 560
LF A P G +
Sbjct: 474 LFQGAEPGPPYTTGDH 489
Score = 335 (123.0 bits), Expect = 2.9e-76, Sum P(2) = 2.9e-76
Identities = 67/110 (60%), Positives = 82/110 (74%)
Query: 635 IPGLKES----IEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGAS 690
+P LK+ + F MT++LDILEDYL GY+Y RIDGN G R SI+ +N PG+
Sbjct: 504 LPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDERDASIEAYNKPGSE 563
Query: 691 QFVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
+FVFLLSTR+GGLGINLATAD VI+YDSDWNP D+QA RAHRIGQ+ +
Sbjct: 564 KFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKE 613
Score = 236 (88.1 bits), Expect = 7.8e-66, Sum P(2) = 7.8e-66
Identities = 45/90 (50%), Positives = 63/90 (70%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATAD VI+YDSDWNP D+QA RAHRIGQ+ +V ++RF T N++E +V + A +K+
Sbjct: 578 INLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEAKVIERAYKKL 637
Query: 802 MLTHLVVRPGMGGKQANFTKQELDDILRFG 831
L LV++ G +Q K EL ++R+G
Sbjct: 638 ALDALVIQQGRLAEQKTVNKDELLQMVRYG 667
>UNIPROTKB|F1N052 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
GO:GO:0031213 EMBL:DAAA02044371 IPI:IPI00868566 UniGene:Bt.103096
Ensembl:ENSBTAT00000004408 Uniprot:F1N052
Length = 1052
Score = 521 (188.5 bits), Expect = 7.7e-76, Sum P(2) = 7.7e-76
Identities = 122/330 (36%), Positives = 181/330 (54%)
Query: 229 TDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFL 288
T++ ++E P ++ G +L YQ+ G+NWL + I+ ILADEMGLGKT+QTI+ L
Sbjct: 162 TNVCTRFEDSPSYVK-WG-KLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLL 219
Query: 289 YSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRDHDISWE 347
+ + GP +V P ST+ NW EF+ W P V +GDK+ R +RD + E
Sbjct: 220 GYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGE 279
Query: 348 DTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFF 407
+ V +TSYE++ + ++ W LV+DEAHR+K+ +SK
Sbjct: 280 ------------------WDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLS 321
Query: 408 KFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFAD---ISKEEQV 464
+ + + N+LLLTGTP P+ FN F + F + ++ V
Sbjct: 322 EIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 381
Query: 465 KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGG 524
+RLH +L P +LRR+KADV K++P K E + V LS MQ+++Y IL ++ + LN G
Sbjct: 382 ERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKM 441
Query: 525 QQVSLLNIMMDLKKCCNHPYLFPAAAEEAP 554
++ LLNI+M L+KCCNHPYLF A E P
Sbjct: 442 DKMRLLNILMQLRKCCNHPYLFDGA-EPGP 470
Score = 324 (119.1 bits), Expect = 7.7e-76, Sum P(2) = 7.7e-76
Identities = 81/203 (39%), Positives = 118/203 (58%)
Query: 635 IPGLKES----IEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGAS 690
+P LKE + F MT++LDILEDY Y+Y R+DG RQESI+ +N P ++
Sbjct: 492 LPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEPNST 551
Query: 691 QFVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTV 750
+FVF+LSTR+GGLGINLATAD VI+YDSDWNP D+QA RAHRIGQ K + V
Sbjct: 552 KFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQ-TKTVR------V 604
Query: 751 IIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM--MLTHLVV 808
+ +D N + + RA + + ++I + V++ + ++ K +M M+ H
Sbjct: 605 FRFITD-NTVEE-RIVERAEMKLRLDSIVIQQ---GRLVDQNLNKIGKDEMLQMIRHGAT 659
Query: 809 RPGMGGKQANFTKQELDDILRFG 831
K++ T +++D IL G
Sbjct: 660 HV-FASKESEITDEDIDGILERG 681
>UNIPROTKB|E2QWV0 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043596 "nuclear replication fork"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0031213 "RSF complex" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0009790
"embryo development" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0006334 "nucleosome
assembly" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005677
"chromatin silencing complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000793 "condensed chromosome" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IEA] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302 GO:GO:0004386
GO:GO:0000793 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
GO:GO:0005677 GO:GO:0016589 GeneTree:ENSGT00680000100002 KO:K11654
SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213 CTD:8467
EMBL:AAEX03010002 RefSeq:XP_532676.1 ProteinModelPortal:E2QWV0
Ensembl:ENSCAFT00000012062 GeneID:475451 KEGG:cfa:475451
NextBio:20851293 Uniprot:E2QWV0
Length = 1052
Score = 521 (188.5 bits), Expect = 7.7e-76, Sum P(2) = 7.7e-76
Identities = 122/330 (36%), Positives = 181/330 (54%)
Query: 229 TDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFL 288
T++ ++E P ++ G +L YQ+ G+NWL + I+ ILADEMGLGKT+QTI+ L
Sbjct: 162 TNVCTRFEDSPSYVK-WG-KLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLL 219
Query: 289 YSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRDHDISWE 347
+ + GP +V P ST+ NW EF+ W P V +GDK+ R +RD + E
Sbjct: 220 GYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGE 279
Query: 348 DTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFF 407
+ V +TSYE++ + ++ W LV+DEAHR+K+ +SK
Sbjct: 280 ------------------WDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLS 321
Query: 408 KFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFAD---ISKEEQV 464
+ + + N+LLLTGTP P+ FN F + F + ++ V
Sbjct: 322 EIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 381
Query: 465 KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGG 524
+RLH +L P +LRR+KADV K++P K E + V LS MQ+++Y IL ++ + LN G
Sbjct: 382 ERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKM 441
Query: 525 QQVSLLNIMMDLKKCCNHPYLFPAAAEEAP 554
++ LLNI+M L+KCCNHPYLF A E P
Sbjct: 442 DKMRLLNILMQLRKCCNHPYLFDGA-EPGP 470
Score = 324 (119.1 bits), Expect = 7.7e-76, Sum P(2) = 7.7e-76
Identities = 81/203 (39%), Positives = 118/203 (58%)
Query: 635 IPGLKES----IEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGAS 690
+P LKE + F MT++LDILEDY Y+Y R+DG RQESI+ +N P ++
Sbjct: 492 LPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEPNST 551
Query: 691 QFVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTV 750
+FVF+LSTR+GGLGINLATAD VI+YDSDWNP D+QA RAHRIGQ K + V
Sbjct: 552 KFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQ-TKTVR------V 604
Query: 751 IIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM--MLTHLVV 808
+ +D N + + RA + + ++I + V++ + ++ K +M M+ H
Sbjct: 605 FRFITD-NTVEE-RIVERAEMKLRLDSIVIQQ---GRLVDQNLNKIGKDEMLQMIRHGAT 659
Query: 809 RPGMGGKQANFTKQELDDILRFG 831
K++ T +++D IL G
Sbjct: 660 HV-FASKESEITDEDIDGILERG 681
>UNIPROTKB|F1RRG9 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
GeneTree:ENSGT00680000100002 KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR
GO:GO:0031213 CTD:8467 EMBL:CU463195 RefSeq:XP_003129222.2
UniGene:Ssc.97261 Ensembl:ENSSSCT00000009907 GeneID:100188903
KEGG:ssc:100188903 ArrayExpress:F1RRG9 Uniprot:F1RRG9
Length = 1052
Score = 521 (188.5 bits), Expect = 7.7e-76, Sum P(2) = 7.7e-76
Identities = 122/330 (36%), Positives = 181/330 (54%)
Query: 229 TDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFL 288
T++ ++E P ++ G +L YQ+ G+NWL + I+ ILADEMGLGKT+QTI+ L
Sbjct: 162 TNVCTRFEDSPSYVK-WG-KLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLL 219
Query: 289 YSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRDHDISWE 347
+ + GP +V P ST+ NW EF+ W P V +GDK+ R +RD + E
Sbjct: 220 GYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGE 279
Query: 348 DTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFF 407
+ V +TSYE++ + ++ W LV+DEAHR+K+ +SK
Sbjct: 280 ------------------WDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLS 321
Query: 408 KFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFAD---ISKEEQV 464
+ + + N+LLLTGTP P+ FN F + F + ++ V
Sbjct: 322 EIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 381
Query: 465 KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGG 524
+RLH +L P +LRR+KADV K++P K E + V LS MQ+++Y IL ++ + LN G
Sbjct: 382 ERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKM 441
Query: 525 QQVSLLNIMMDLKKCCNHPYLFPAAAEEAP 554
++ LLNI+M L+KCCNHPYLF A E P
Sbjct: 442 DKMRLLNILMQLRKCCNHPYLFDGA-EPGP 470
Score = 324 (119.1 bits), Expect = 7.7e-76, Sum P(2) = 7.7e-76
Identities = 81/203 (39%), Positives = 118/203 (58%)
Query: 635 IPGLKES----IEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGAS 690
+P LKE + F MT++LDILEDY Y+Y R+DG RQESI+ +N P ++
Sbjct: 492 LPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEPNST 551
Query: 691 QFVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTV 750
+FVF+LSTR+GGLGINLATAD VI+YDSDWNP D+QA RAHRIGQ K + V
Sbjct: 552 KFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQ-TKTVR------V 604
Query: 751 IIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM--MLTHLVV 808
+ +D N + + RA + + ++I + V++ + ++ K +M M+ H
Sbjct: 605 FRFITD-NTVEE-RIVERAEMKLRLDSIVIQQ---GRLVDQNLNKIGKDEMLQMIRHGAT 659
Query: 809 RPGMGGKQANFTKQELDDILRFG 831
K++ T +++D IL G
Sbjct: 660 HV-FASKESEITDEDIDGILERG 681
>UNIPROTKB|F1RTI9 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0036310 "annealing helicase
activity" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016589
GO:GO:0008094 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:PMSQKRK EMBL:CU695129 Ensembl:ENSSSCT00000013830 Uniprot:F1RTI9
Length = 1073
Score = 545 (196.9 bits), Expect = 1.3e-75, Sum P(2) = 1.3e-75
Identities = 122/333 (36%), Positives = 182/333 (54%)
Query: 226 KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTI 285
+ T+++ ++E P ++ G L YQ+ G+NWL + ++ ILADEMGLGKT+QTI
Sbjct: 165 RKTSNVCVRFEVSPSYVK--GGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTI 222
Query: 286 TFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRDHDI 344
L L + GP +V P ST+ NW EF+ W P V+ +VGDKD R +RD +
Sbjct: 223 ALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMM 282
Query: 345 SWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQS 404
E + V +TSYE++ + ++ W LV+DEAHR+K+ +S
Sbjct: 283 PGE------------------WDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKS 324
Query: 405 KFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFAD---ISKE 461
K + + + N+LLLTGTP P+ FN F + F + +
Sbjct: 325 KLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQ 384
Query: 462 EQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPK 521
+ V+RLH +L P +LRR+K DV K++P K E + + LS MQ+++Y IL ++ + LN
Sbjct: 385 KLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSA 444
Query: 522 GGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAP 554
G ++ LLNI+M L+KCCNHPYLF A E P
Sbjct: 445 GKMDKMRLLNILMQLRKCCNHPYLFDGA-EPGP 476
Score = 296 (109.3 bits), Expect = 1.3e-75, Sum P(2) = 1.3e-75
Identities = 69/153 (45%), Positives = 93/153 (60%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNI------TGSM------RQESIDRFNAPGASQ 691
F MT++LDILEDY GY+Y R+DG G + R+E+I+ FN P +S+
Sbjct: 511 FSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEERENGFLQIYFRRRREAIEAFNVPNSSR 570
Query: 692 FVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADT 749
F+F+LSTR+GGLGINLA+AD VI+YDSDWNP D+QA RAHRIGQ+ + L T +T
Sbjct: 571 FIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNT 630
Query: 750 V---IIYDSDWNPHNDIQAFSRAHRIGQQNKVM 779
V I+ ++ D + I QQ+ M
Sbjct: 631 VEERIVERAEIKLRLDSIVIQQGRLIDQQSNKM 663
Score = 225 (84.3 bits), Expect = 4.0e-68, Sum P(2) = 4.0e-68
Identities = 44/92 (47%), Positives = 66/92 (71%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLA+AD VI+YDSDWNP D+QA RAHRIGQ+ V ++R +T N+VEER+ + A+ K+
Sbjct: 584 INLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKL 643
Query: 802 MLTHLVVRPG-MGGKQAN-FTKQELDDILRFG 831
L +V++ G + +Q+N K+E+ ++R G
Sbjct: 644 RLDSIVIQQGRLIDQQSNKMAKEEMLQMIRHG 675
>RGD|1561046 [details] [associations]
symbol:Smarca1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 1"
species:10116 "Rattus norvegicus" [GO:0000733 "DNA strand
renaturation" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=ISO] [GO:0007420 "brain development"
evidence=ISO] [GO:0016589 "NURF complex" evidence=ISO] [GO:0030182
"neuron differentiation" evidence=ISO] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0036310 "annealing helicase activity"
evidence=ISO] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0090537 "CERF
complex" evidence=ISO] [GO:2000177 "regulation of neural precursor
cell proliferation" evidence=ISO] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISO] [GO:0070615 "nucleosome-dependent ATPase
activity" evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:1561046 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 IPI:IPI00947680
PRIDE:D3ZIE5 Ensembl:ENSRNOT00000068478 UCSC:RGD:1561046
ArrayExpress:D3ZIE5 Uniprot:D3ZIE5
Length = 1034
Score = 544 (196.6 bits), Expect = 1.3e-75, Sum P(2) = 1.3e-75
Identities = 122/333 (36%), Positives = 182/333 (54%)
Query: 226 KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTI 285
+ T+++ ++E P ++ G L YQ+ G+NWL + ++ ILADEMGLGKT+QTI
Sbjct: 142 RKTSNVCVRFEVSPSYVK--GGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTI 199
Query: 286 TFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRDHDI 344
L L + GP +V P ST+ NW EF+ W P V+ +VGDKD R +RD +
Sbjct: 200 ALLGYLKHYRNFPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIRDEMM 259
Query: 345 SWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQS 404
E + V +TSYE++ + ++ W LV+DEAHR+K+ +S
Sbjct: 260 PGE------------------WDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKS 301
Query: 405 KFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFAD---ISKE 461
K + + + N+LLLTGTP P+ FN F + F + +
Sbjct: 302 KLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQ 361
Query: 462 EQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPK 521
+ V+RLH +L P +LRR+K DV K++P K E + + LS MQ+++Y IL ++ + LN
Sbjct: 362 KLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSS 421
Query: 522 GGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAP 554
G ++ LLNI+M L+KCCNHPYLF A E P
Sbjct: 422 GKMDKMRLLNILMQLRKCCNHPYLFDGA-EPGP 453
Score = 296 (109.3 bits), Expect = 1.3e-75, Sum P(2) = 1.3e-75
Identities = 63/121 (52%), Positives = 81/121 (66%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQ------------ESIDRFNAPGASQ 691
F MT++LDILEDY GY+Y R+DG R+ E+I+ FNAP +S+
Sbjct: 488 FSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEERENLFLHKHNLFSTEAIEAFNAPNSSK 547
Query: 692 FVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADT 749
F+F+LSTR+GGLGINLA+AD VI+YDSDWNP D+QA RAHRIGQ+ + L T +T
Sbjct: 548 FIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNT 607
Query: 750 V 750
V
Sbjct: 608 V 608
Score = 226 (84.6 bits), Expect = 3.2e-68, Sum P(2) = 3.2e-68
Identities = 50/128 (39%), Positives = 81/128 (63%)
Query: 706 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQA 765
NL + + + +++ P++ F + R G INLA+AD VI+YDSDWNP D+QA
Sbjct: 530 NLFSTEAIEAFNA---PNSSKFIFMLSTRAGGLG--INLASADVVILYDSDWNPQVDLQA 584
Query: 766 FSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPG-MGGKQAN-FTKQE 823
RAHRIGQ+ V ++R +T N+VEER+ + A+ K+ L +V++ G + +Q+N K+E
Sbjct: 585 MDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEE 644
Query: 824 LDDILRFG 831
+ ++R G
Sbjct: 645 MLQMIRHG 652
>UNIPROTKB|F1N166 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0036310 "annealing helicase
activity" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016589
GO:GO:0008094 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:PMSQKRK EMBL:DAAA02067438 EMBL:DAAA02067437 IPI:IPI01018574
Ensembl:ENSBTAT00000002973 Uniprot:F1N166
Length = 1078
Score = 547 (197.6 bits), Expect = 5.2e-75, Sum P(3) = 5.2e-75
Identities = 122/333 (36%), Positives = 182/333 (54%)
Query: 226 KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTI 285
+ T+++ ++E P ++ G L YQ+ G+NWL + ++ ILADEMGLGKT+QTI
Sbjct: 165 RKTSNVCVRFEVSPSYVK--GGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTI 222
Query: 286 TFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRDHDI 344
L L + GP +V P ST+ NW EF+ W P V+ +VGDKD R +RD +
Sbjct: 223 ALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMM 282
Query: 345 SWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQS 404
E + V +TSYE++ + ++ W LV+DEAHR+K+ +S
Sbjct: 283 PGE------------------WDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKS 324
Query: 405 KFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFAD---ISKE 461
K + + + N+LLLTGTP P+ FN F + F + +
Sbjct: 325 KLSEIVRDFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAEDFDSWFDTKNCLGDQ 384
Query: 462 EQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPK 521
+ V+RLH +L P +LRR+K DV K++P K E + + LS MQ+++Y IL ++ + LN
Sbjct: 385 KLVERLHTVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSA 444
Query: 522 GGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAP 554
G ++ LLNI+M L+KCCNHPYLF A E P
Sbjct: 445 GKMDKMRLLNILMQLRKCCNHPYLFDGA-EPGP 476
Score = 238 (88.8 bits), Expect = 5.2e-75, Sum P(3) = 5.2e-75
Identities = 51/106 (48%), Positives = 69/106 (65%)
Query: 679 ESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQ 738
E+I+ FN P +S+F+F+LSTR+GGLGINLA+AD VI+YDSDWNP D+QA RAHRIGQ+
Sbjct: 563 EAIEAFNIPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQK 622
Query: 739 N--KYINLATADTV---IIYDSDWNPHNDIQAFSRAHRIGQQNKVM 779
+ L T +TV I+ ++ D + I QQ+ M
Sbjct: 623 KPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKM 668
Score = 225 (84.3 bits), Expect = 1.2e-73, Sum P(3) = 1.2e-73
Identities = 44/92 (47%), Positives = 66/92 (71%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLA+AD VI+YDSDWNP D+QA RAHRIGQ+ V ++R +T N+VEER+ + A+ K+
Sbjct: 589 INLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKL 648
Query: 802 MLTHLVVRPG-MGGKQAN-FTKQELDDILRFG 831
L +V++ G + +Q+N K+E+ ++R G
Sbjct: 649 RLDSIVIQQGRLIDQQSNKMAKEEMLQMIRHG 680
Score = 93 (37.8 bits), Expect = 5.2e-75, Sum P(3) = 5.2e-75
Identities = 19/41 (46%), Positives = 25/41 (60%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRF 684
F MT++LDILEDY GY+Y R+DG R+E + F
Sbjct: 511 FSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEILKDF 551
>SGD|S000000449 [details] [associations]
symbol:ISW1 "ATPase subunit of imitation-switch (ISWI) class
chromatin remodelers" species:4932 "Saccharomyces cerevisiae"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IGI]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0031491 "nucleosome binding" evidence=IEA;IDA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0000182 "rDNA
binding" evidence=IDA] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IGI] [GO:0070870 "heterochromatin
maintenance involved in chromatin silencing" evidence=IGI;IMP]
[GO:0016587 "Isw1 complex" evidence=IPI] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=IMP;IDA] [GO:0006338 "chromatin
remodeling" evidence=IEA;IGI;IMP;IPI] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0001178 "regulation of transcriptional start site
selection at RNA polymerase II promoter" evidence=IGI] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IGI;IMP] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 SGD:S000000449 GO:GO:0005524 GO:GO:0006200
GO:GO:0045944 EMBL:BK006936 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
GO:GO:0034401 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006363 GO:GO:0006354 GO:GO:0006369
GeneTree:ENSGT00670000098110 GO:GO:0030874 GO:GO:0000182
GO:GO:0001178 GO:GO:0070870 GO:GO:0016587 PDB:2Y9Y PDB:2Y9Z
PDBsum:2Y9Y PDBsum:2Y9Z HOGENOM:HOG000192862 SUPFAM:SSF101224
EMBL:Z36114 PIR:S46122 RefSeq:NP_009804.1 ProteinModelPortal:P38144
SMR:P38144 DIP:DIP-6601N IntAct:P38144 MINT:MINT-614918
STRING:P38144 PaxDb:P38144 PeptideAtlas:P38144 EnsemblFungi:YBR245C
GeneID:852547 KEGG:sce:YBR245C CYGD:YBR245c OMA:LEMITHG
OrthoDB:EOG48SM27 EvolutionaryTrace:P38144 NextBio:971628
Genevestigator:P38144 GermOnline:YBR245C Uniprot:P38144
Length = 1129
Score = 533 (192.7 bits), Expect = 6.2e-75, Sum P(2) = 6.2e-75
Identities = 128/328 (39%), Positives = 180/328 (54%)
Query: 234 KYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFL-YSLF 292
++ + P +++ QL YQ++G+NWL I ILADEMGLGKT+QTI+FL Y +
Sbjct: 184 QFRESPAYVNG---QLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRY 240
Query: 293 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANR 352
E GPFLV AP ST+ NW RE W PD GDK+ R L + D
Sbjct: 241 IE-KIPGPFLVIAPKSTLNNWLREINRWTPDVNAFILQGDKEERAELIQKKLLGCD---- 295
Query: 353 GGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSG 412
F V++ SYE+I + + L I W +++DEAHR+K+ +S + L
Sbjct: 296 -------------FDVVIASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLRE 342
Query: 413 YSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQ----VKRLH 468
++ +N+LL+TGTP P+ F+D F F+ S EE VK+LH
Sbjct: 343 FTSRNRLLITGTPLQNNLHELWALLNFLLPDIFSDAQDFDDWFSSESTEEDQDKIVKQLH 402
Query: 469 DLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQ-- 526
+L P +LRR+K+DV ++ K E + V +S MQKK+YK IL ++ +A+N G ++
Sbjct: 403 TVLQPFLLRRIKSDVETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAVNGSNGSKESK 462
Query: 527 VSLLNIMMDLKKCCNHPYLFPAAAEEAP 554
LLNIMM L+KCCNHPYLF A E P
Sbjct: 463 TRLLNIMMQLRKCCNHPYLFDGA-EPGP 489
Score = 304 (112.1 bits), Expect = 6.2e-75, Sum P(2) = 6.2e-75
Identities = 66/136 (48%), Positives = 90/136 (66%)
Query: 621 LPYDKATWEDENEDIPGLKES----IEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSM 676
L Y+ A + ++ + LKE + F M+++LDILEDY Y+Y RIDG+
Sbjct: 497 LVYNAAKLQVLDKLLKKLKEEGSRVLIFSQMSRLLDILEDYCYFRNYEYCRIDGSTAHED 556
Query: 677 RQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIG 736
R ++ID +NAP + +FVFLL+TR+GGLGINL +AD V++YDSDWNP D+QA RAHRIG
Sbjct: 557 RIQAIDDYNAPDSKKFVFLLTTRAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIG 616
Query: 737 Q--QNKYINLATADTV 750
Q Q K L T ++V
Sbjct: 617 QKKQVKVFRLVTDNSV 632
Score = 212 (79.7 bits), Expect = 3.1e-65, Sum P(2) = 3.1e-65
Identities = 49/122 (40%), Positives = 69/122 (56%)
Query: 708 ATADTVIIYDSDWN-PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAF 766
A D + D D+N P + F R G INL +AD V++YDSDWNP D+QA
Sbjct: 553 AHEDRIQAID-DYNAPDSKKFVFLLTTRAGGLG--INLTSADVVVLYDSDWNPQADLQAM 609
Query: 767 SRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQANFTKQELDD 826
RAHRIGQ+ +V ++R VT NSVEE++ + A +K+ L LV++ + K + D
Sbjct: 610 DRAHRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQLVIQQNRTSLKKKENKADSKD 669
Query: 827 IL 828
L
Sbjct: 670 AL 671
>ZFIN|ZDB-GENE-021125-1 [details] [associations]
symbol:smarca5 "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily a, member 5"
species:7955 "Danio rerio" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 ZFIN:ZDB-GENE-021125-1 GO:GO:0005524
GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0060041
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 OMA:EDYCHWR HOVERGEN:HBG056329 EMBL:CU550733
IPI:IPI00619566 UniGene:Dr.76168 Ensembl:ENSDART00000123972
ArrayExpress:B8A552 Bgee:B8A552 Uniprot:B8A552
Length = 1035
Score = 520 (188.1 bits), Expect = 8.1e-75, Sum P(2) = 8.1e-75
Identities = 121/329 (36%), Positives = 178/329 (54%)
Query: 229 TDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFL 288
T + +++ P ++ TG +L YQ+ G+NWL + I+ ILADEMGLGKT+QTI+ L
Sbjct: 145 TSVCTRFDDSPSYVK-TG-KLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLL 202
Query: 289 YSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWED 348
+ + GP +V P ST+ NW EF+ W P V +GD++ R D
Sbjct: 203 GYMKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLKAVCLIGDREERTAFI------RD 256
Query: 349 TANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFK 408
T G ++ V +TSYE++ + A+ W LV+DEAHR+K+ +SK +
Sbjct: 257 TLLPG-----------EWDVCVTSYEMLIIERAVFKKFNWRYLVIDEAHRIKNEKSKLSE 305
Query: 409 FLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFAD---ISKEEQVK 465
+ + N+LLLTGTP P+ FN F A F + + V+
Sbjct: 306 IVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDAWFDTNNCLGDTKLVE 365
Query: 466 RLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQ 525
RLH +L P +LRR+KADV K++ K E + V LS MQ+++Y IL ++ + LN G
Sbjct: 366 RLHTVLRPFLLRRIKADVEKSLLPKKEIKIYVGLSKMQREWYTKILMKDIDILNSAGKMD 425
Query: 526 QVSLLNIMMDLKKCCNHPYLFPAAAEEAP 554
++ LLN++M L+KCCNHPYLF A E P
Sbjct: 426 KMRLLNVLMQLRKCCNHPYLFDGA-EPGP 453
Score = 315 (115.9 bits), Expect = 8.1e-75, Sum P(2) = 8.1e-75
Identities = 68/122 (55%), Positives = 82/122 (67%)
Query: 635 IPGLKES----IEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGAS 690
+P LKE + F MT++LDILEDY Y Y R+DG RQ SI+ FN P +S
Sbjct: 475 LPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYGYCRLDGQTPHEERQISINAFNEPNSS 534
Query: 691 QFVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ--QNKYINLATAD 748
+F+F+LSTR+GGLGINLATAD VIIYDSDWNP D+QA RAHRIGQ Q + T +
Sbjct: 535 KFLFMLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFITDN 594
Query: 749 TV 750
TV
Sbjct: 595 TV 596
Score = 233 (87.1 bits), Expect = 3.6e-66, Sum P(2) = 3.6e-66
Identities = 46/92 (50%), Positives = 63/92 (68%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATAD VIIYDSDWNP D+QA RAHRIGQ+ +V ++RF+T N+VEER+ + A+ K+
Sbjct: 549 INLATADVVIIYDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFITDNTVEERIVERAEMKL 608
Query: 802 MLTHLVVRPG--MGGKQANFTKQELDDILRFG 831
L +V++ G + K E+ I+R G
Sbjct: 609 RLDSIVIQQGRLVDPSMNKLGKDEMLSIIRHG 640
>UNIPROTKB|F1SDB8 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0006974 GO:GO:0006338
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 GO:GO:0008026 OMA:TCQTIAL
GeneTree:ENSGT00670000098110 EMBL:CU462855
Ensembl:ENSSSCT00000007340 Uniprot:F1SDB8
Length = 905
Score = 370 (135.3 bits), Expect = 1.0e-74, Sum P(3) = 1.0e-74
Identities = 82/204 (40%), Positives = 117/204 (57%)
Query: 366 FHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTP 425
FHVLLT+YE+ D + L S W+VLVVDEAHRLK+ S K LS +S+ +LLLTGTP
Sbjct: 148 FHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQNSLLHKSLSEFSVAFRLLLTGTP 207
Query: 426 XXXXXXXXXXXXXXXTPEKFN--DLTSFQAEFADISKE-EQVKRLHDLLGPHMLRRLKAD 482
P+ F+ ++ F + DI KE E L+ LL P +LRR+KA+
Sbjct: 208 IQNSLQELYSLLSFVEPDLFSKEEVEDFVQRYEDIEKESESASELYKLLQPFLLRRVKAE 267
Query: 483 VLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGG--GQQVSLLNIMMDLKKCC 540
V +P K+E ++ +S +QKKYYK IL ++ E + ++V L N++ L+KC
Sbjct: 268 VAAELPKKTEVVIYHGMSALQKKYYKAILMKDLEISDAFENEMAKKVKLQNVLSQLRKCV 327
Query: 541 NHPYLFPAAAEEAPVQGGQYEIQA 564
+HPYLF E P + G + I+A
Sbjct: 328 DHPYLFDGVEPE-PFEIGDHLIEA 350
Score = 297 (109.6 bits), Expect = 1.0e-74, Sum P(3) = 1.0e-74
Identities = 61/109 (55%), Positives = 75/109 (68%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MT+MLDIL+DY+D GY YER+DG++ G R +I F F+FLLSTR+GG+
Sbjct: 374 FSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQPI--FIFLLSTRAGGV 431
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV 750
G+NL ADTVI DSD+NP ND+QA +RAHRIGQ K I L DTV
Sbjct: 432 GMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTV 480
Score = 222 (83.2 bits), Expect = 1.0e-74, Sum P(3) = 1.0e-74
Identities = 59/147 (40%), Positives = 79/147 (53%)
Query: 205 LQEDEDGAS-GSKPRRYTPPPEKPTTDL-RKKYEKQP-PFLDDTGMQLHAYQLEGINWLR 261
++ E G S G+ PR + T+ R + ++Q TG+ L YQLEG+NWL
Sbjct: 1 MERAEAGTSAGNMPRFLLALQSQSRTEAERARVQEQDLRRWGLTGIHLRPYQLEGVNWLA 60
Query: 262 YSWGQNIDTILADEMGLGKTIQTIT-FLYSLFKEGHCKGPFLVSAPLSTIINWEREFETW 320
+ IL DEMGLGKT QTI F+Y L + +GPFL+ PLS + NW+ E E
Sbjct: 61 QCFHYQNGCILGDEMGLGKTCQTIAVFIY-LAGRLNDEGPFLILCPLSVLSNWKEEMERC 119
Query: 321 APDFYVVTYVGDKDCRIVLRDHDISWE 347
AP VTY GDK+ R L+ D+ E
Sbjct: 120 APGLCCVTYAGDKEERAHLQQ-DLKQE 145
Score = 193 (73.0 bits), Expect = 8.1e-64, Sum P(3) = 8.1e-64
Identities = 41/94 (43%), Positives = 61/94 (64%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL ADTVI DSD+NP ND+QA +RAHRIGQ V + R + R++VEE + + A K+
Sbjct: 433 MNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIICRKAASKL 492
Query: 802 MLTHLVVRPG---MGGKQ-ANFTKQELDDILRFG 831
LT+ ++ G +G ++ A +L +IL+FG
Sbjct: 493 KLTNTIIEGGRFTLGAQRPAAEADLQLSEILKFG 526
>CGD|CAL0005422 [details] [associations]
symbol:ISW2 species:5476 "Candida albicans" [GO:0001410
"chlamydospore formation" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0071280 "cellular response to copper ion"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0008623 "CHRAC" evidence=IEA] [GO:0060195 "negative regulation
of antisense RNA transcription" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0000183 "chromatin
silencing at rDNA" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0046020 "negative
regulation of transcription from RNA polymerase II promoter by
pheromones" evidence=IEA] [GO:0006348 "chromatin silencing at
telomere" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IEA] [GO:0015616 "DNA translocase activity" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
KEGG:cal:CaO19.7401 Uniprot:Q5A310
Length = 1056
Score = 528 (190.9 bits), Expect = 4.2e-74, Sum P(2) = 4.2e-74
Identities = 127/333 (38%), Positives = 183/333 (54%)
Query: 237 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 296
+ P ++ + G +L YQ++G+NWL + + ILADEMGLGKT+QTI+FL L H
Sbjct: 129 ESPSYIKE-G-KLREYQIQGLNWLISLYENRLSGILADEMGLGKTLQTISFLGYLRYIKH 186
Query: 297 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRI-VLRDHDISWEDTANRGGK 355
GPF+V P ST+ NW REF W PD VV GDK+ R +++D
Sbjct: 187 IDGPFIVIVPKSTLDNWRREFAKWTPDVNVVVLQGDKEQRASIIKD-------------- 232
Query: 356 PCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSI 415
+ T KF VL+TS+E+I + + L W +VVDEAHR+K+ S K + +
Sbjct: 233 ----QLYTAKFDVLITSFEMILREKSALQKFRWEYIVVDEAHRIKNEDSSLSKIIRLFYS 288
Query: 416 QNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEF-----ADISKEEQVKR---- 466
+N+LL+TGTP P+ F D F F ++ +EE+ +R
Sbjct: 289 RNRLLITGTPLQNNLHELWALLNFLLPDVFGDSDQFDEAFDNQNSEELDEEEKQRRQDKA 348
Query: 467 ---LHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGG 523
LH LL P +LRR+KADV K++ K E V + ++ MQ ++YK +L ++ +A+N G
Sbjct: 349 VSELHQLLSPFLLRRVKADVEKSLLPKIETNVYIGMTDMQVEWYKRLLEKDIDAVNGVVG 408
Query: 524 GQQ--VSLLNIMMDLKKCCNHPYLFPAAAEEAP 554
++ LLNI+M L+KCCNHPYLF A E P
Sbjct: 409 KREGKTRLLNIVMQLRKCCNHPYLFDGA-EPGP 440
Score = 300 (110.7 bits), Expect = 4.2e-74, Sum P(2) = 4.2e-74
Identities = 56/97 (57%), Positives = 74/97 (76%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M+++LDILEDY Y+Y RIDG+ + R E+ID +NAP + +F+FLL+TR+GGL
Sbjct: 475 FSQMSRVLDILEDYCYFRDYEYCRIDGSTSHEDRIEAIDEYNAPDSEKFIFLLTTRAGGL 534
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
GINL +AD VI+YDSDWNP D+QA RAHRIGQ+ +
Sbjct: 535 GINLTSADIVILYDSDWNPQADLQAMDRAHRIGQKKQ 571
Score = 219 (82.2 bits), Expect = 1.4e-65, Sum P(2) = 1.4e-65
Identities = 41/87 (47%), Positives = 58/87 (66%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INL +AD VI+YDSDWNP D+QA RAHRIGQ+ +V ++RFVT ++EE+V + A +K+
Sbjct: 536 INLTSADIVILYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTEKAIEEKVLERAAQKL 595
Query: 802 MLTHLVVRPGMGGKQANFTKQELDDIL 828
L LV++ G N DD++
Sbjct: 596 RLDQLVIQQGRQMNSNNNVGNSKDDLI 622
>UNIPROTKB|Q5A310 [details] [associations]
symbol:ISW2 "Putative uncharacterized protein ISW2"
species:237561 "Candida albicans SC5314" [GO:0001410 "chlamydospore
formation" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0071280 "cellular response to copper ion" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
KEGG:cal:CaO19.7401 Uniprot:Q5A310
Length = 1056
Score = 528 (190.9 bits), Expect = 4.2e-74, Sum P(2) = 4.2e-74
Identities = 127/333 (38%), Positives = 183/333 (54%)
Query: 237 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 296
+ P ++ + G +L YQ++G+NWL + + ILADEMGLGKT+QTI+FL L H
Sbjct: 129 ESPSYIKE-G-KLREYQIQGLNWLISLYENRLSGILADEMGLGKTLQTISFLGYLRYIKH 186
Query: 297 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRI-VLRDHDISWEDTANRGGK 355
GPF+V P ST+ NW REF W PD VV GDK+ R +++D
Sbjct: 187 IDGPFIVIVPKSTLDNWRREFAKWTPDVNVVVLQGDKEQRASIIKD-------------- 232
Query: 356 PCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSI 415
+ T KF VL+TS+E+I + + L W +VVDEAHR+K+ S K + +
Sbjct: 233 ----QLYTAKFDVLITSFEMILREKSALQKFRWEYIVVDEAHRIKNEDSSLSKIIRLFYS 288
Query: 416 QNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEF-----ADISKEEQVKR---- 466
+N+LL+TGTP P+ F D F F ++ +EE+ +R
Sbjct: 289 RNRLLITGTPLQNNLHELWALLNFLLPDVFGDSDQFDEAFDNQNSEELDEEEKQRRQDKA 348
Query: 467 ---LHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGG 523
LH LL P +LRR+KADV K++ K E V + ++ MQ ++YK +L ++ +A+N G
Sbjct: 349 VSELHQLLSPFLLRRVKADVEKSLLPKIETNVYIGMTDMQVEWYKRLLEKDIDAVNGVVG 408
Query: 524 GQQ--VSLLNIMMDLKKCCNHPYLFPAAAEEAP 554
++ LLNI+M L+KCCNHPYLF A E P
Sbjct: 409 KREGKTRLLNIVMQLRKCCNHPYLFDGA-EPGP 440
Score = 300 (110.7 bits), Expect = 4.2e-74, Sum P(2) = 4.2e-74
Identities = 56/97 (57%), Positives = 74/97 (76%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M+++LDILEDY Y+Y RIDG+ + R E+ID +NAP + +F+FLL+TR+GGL
Sbjct: 475 FSQMSRVLDILEDYCYFRDYEYCRIDGSTSHEDRIEAIDEYNAPDSEKFIFLLTTRAGGL 534
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
GINL +AD VI+YDSDWNP D+QA RAHRIGQ+ +
Sbjct: 535 GINLTSADIVILYDSDWNPQADLQAMDRAHRIGQKKQ 571
Score = 219 (82.2 bits), Expect = 1.4e-65, Sum P(2) = 1.4e-65
Identities = 41/87 (47%), Positives = 58/87 (66%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INL +AD VI+YDSDWNP D+QA RAHRIGQ+ +V ++RFVT ++EE+V + A +K+
Sbjct: 536 INLTSADIVILYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTEKAIEEKVLERAAQKL 595
Query: 802 MLTHLVVRPGMGGKQANFTKQELDDIL 828
L LV++ G N DD++
Sbjct: 596 RLDQLVIQQGRQMNSNNNVGNSKDDLI 622
>UNIPROTKB|F1Q2U2 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 GO:GO:0008026 OMA:TCQTIAL
GeneTree:ENSGT00670000098110 EMBL:AAEX03011032
Ensembl:ENSCAFT00000017488 Uniprot:F1Q2U2
Length = 898
Score = 354 (129.7 bits), Expect = 8.1e-73, Sum P(3) = 8.1e-73
Identities = 76/185 (41%), Positives = 107/185 (57%)
Query: 365 KFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGT 424
+FHVLLT+YE+ D + L S W+VLVVDEAHRLK+ S K L +S+ LLLTGT
Sbjct: 147 RFHVLLTTYEICLKDSSFLKSFPWSVLVVDEAHRLKNQNSLLHKTLLEFSVVFSLLLTGT 206
Query: 425 PXXXXXXXXXXXXXXXTPEKF--NDLTSFQAEFADISKE-EQVKRLHDLLGPHMLRRLKA 481
P P+ F + F + DI KE + LH LL P +LRR+KA
Sbjct: 207 PIQNSLQELYSLLSFVEPDLFPKEQVGDFVQRYQDIEKESDSASELHKLLQPFLLRRVKA 266
Query: 482 DVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCN 541
+V +P K+E ++ +S +QKKYYK IL ++ +A + ++V L N++ L+KC +
Sbjct: 267 EVATELPKKTEVVLYHGMSALQKKYYKAILMKDLDAFESEMA-KKVKLQNVLSQLRKCVD 325
Query: 542 HPYLF 546
HPYLF
Sbjct: 326 HPYLF 330
Score = 302 (111.4 bits), Expect = 8.1e-73, Sum P(3) = 8.1e-73
Identities = 64/114 (56%), Positives = 78/114 (68%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MT+MLDIL+DY+D GY YER+DG++ G R +I F FVFLLSTR+GG+
Sbjct: 370 FSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQPV--FVFLLSTRAGGV 427
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV--IIY 753
G+NL ADTVI DSD+NP ND+QA +RAHRIGQ K I L DTV I+Y
Sbjct: 428 GMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVY 481
Score = 216 (81.1 bits), Expect = 8.1e-73, Sum P(3) = 8.1e-73
Identities = 47/103 (45%), Positives = 60/103 (58%)
Query: 245 TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVS 304
TG++L +YQLEG+NWL + IL DEMGLGKT QTI L + +GPFL+
Sbjct: 44 TGIRLRSYQLEGVNWLARCFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLIL 103
Query: 305 APLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWE 347
PLS + NW E E +AP V Y GDK+ R L+ D+ E
Sbjct: 104 CPLSVLSNWTEEMERFAPGLSCVMYAGDKEERARLQQ-DLKQE 145
Score = 196 (74.1 bits), Expect = 1.0e-61, Sum P(3) = 1.0e-61
Identities = 43/94 (45%), Positives = 60/94 (63%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL ADTVI DSD+NP ND+QA +RAHRIGQ V + R + R++VEE V + A K+
Sbjct: 429 MNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKL 488
Query: 802 MLTHLVVRPG---MGG-KQANFTKQELDDILRFG 831
LT+ ++ G +G K A +L +IL+FG
Sbjct: 489 QLTNAIIEGGHFTLGAQKPAADADLQLSEILKFG 522
>UNIPROTKB|F1NS62 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0006974 GO:GO:0006338
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
OMA:TCQTIAL GeneTree:ENSGT00670000098110 EMBL:AADN02037964
EMBL:AADN02037962 EMBL:AADN02037963 IPI:IPI00573125
Ensembl:ENSGALT00000024254 Uniprot:F1NS62
Length = 895
Score = 354 (129.7 bits), Expect = 4.3e-72, Sum P(3) = 4.3e-72
Identities = 78/202 (38%), Positives = 115/202 (56%)
Query: 366 FHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTP 425
F VLLT+YE+ D A L +WA LVVDEAHRLK+ S ++ L+ + LLLTGTP
Sbjct: 146 FRVLLTTYEICLKDAAFLKFFDWAALVVDEAHRLKNQNSLLYETLTELPVGFSLLLTGTP 205
Query: 426 XXXXXXXXXXXXXXXTPEKF--NDLTSFQAEFADISKE-EQVKRLHDLLGPHMLRRLKAD 482
P+ F + F + + KE E K LH+LL P +LRR+K++
Sbjct: 206 IQNSLQELYSLLSFIEPDIFPRKQVKEFVEYYQAVEKESEPAKELHNLLQPFLLRRVKSE 265
Query: 483 VLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNH 542
V ++P K E ++ +S +Q+KYYK ILT++ +A G G++V L N+++ L+KC H
Sbjct: 266 VTADLPKKVEVVLYHGMSALQRKYYKAILTKDLDAFEG-GTGRKVMLQNVLIQLRKCVAH 324
Query: 543 PYLFPAAAEEAPVQGGQYEIQA 564
PYLF E P + G + ++A
Sbjct: 325 PYLFNGVEPE-PFEIGDHIVEA 345
Score = 303 (111.7 bits), Expect = 4.3e-72, Sum P(3) = 4.3e-72
Identities = 65/114 (57%), Positives = 78/114 (68%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MTK+LDIL+DY+D GY YER+DG++ G R +I F FVFLLSTR+GG+
Sbjct: 369 FSQMTKLLDILQDYMDYRGYSYERLDGSVRGEERHLAIKNFGQQPI--FVFLLSTRAGGV 426
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV--IIY 753
G+NL ADTVI DSD+NP ND+QA +RAHRIGQ K I L DTV IIY
Sbjct: 427 GMNLTAADTVIFTDSDFNPQNDLQAIARAHRIGQHKPVKIIRLIGRDTVEEIIY 480
Score = 208 (78.3 bits), Expect = 4.3e-72, Sum P(3) = 4.3e-72
Identities = 45/98 (45%), Positives = 60/98 (61%)
Query: 245 TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVS 304
TG++L YQL+G+NWL + IL DEMGLGKT QTI+ L L K+ K L+
Sbjct: 42 TGIKLRPYQLDGVNWLVQCYQVQHGCILGDEMGLGKTCQTISLLLYLTKKLTNKERSLIL 101
Query: 305 APLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDH 342
PLS + NW+ E E +AP VTYVG+K+ R L+ +
Sbjct: 102 CPLSVLSNWKEELERFAPGLSFVTYVGNKEERYKLQQN 139
Score = 192 (72.6 bits), Expect = 1.8e-60, Sum P(3) = 1.8e-60
Identities = 43/94 (45%), Positives = 60/94 (63%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL ADTVI DSD+NP ND+QA +RAHRIGQ V I R + R++VEE + + A K+
Sbjct: 428 MNLTAADTVIFTDSDFNPQNDLQAIARAHRIGQHKPVKIIRLIGRDTVEEIIYRRAASKL 487
Query: 802 MLTHLVVRPG---MG-GKQANFTKQELDDILRFG 831
LT+ +V G +G K + +L +IL+FG
Sbjct: 488 RLTNAIVEGGQFALGVHKPQEASDLQLSEILKFG 521
>SGD|S000005831 [details] [associations]
symbol:ISW2 "ATP-dependent DNA translocase involved in
chromatin remodeling" species:4932 "Saccharomyces cerevisiae"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA;IPI] [GO:0006338 "chromatin remodeling"
evidence=IEA;IGI;IMP;IPI] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0060195 "negative
regulation of antisense RNA transcription" evidence=IGI]
[GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0008623
"CHRAC" evidence=ISS;IPI] [GO:0046020 "negative regulation of
transcription from RNA polymerase II promoter by pheromones"
evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IMP] [GO:0015616 "DNA
translocase activity" evidence=IDA] [GO:0003697 "single-stranded
DNA binding" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IGI]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 SGD:S000005831 GO:GO:0005524 EMBL:BK006948
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0003697
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006348
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0008623 GO:GO:0006369 GO:GO:0046020 GO:GO:0060195
GO:GO:0015616 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 OrthoDB:EOG48SM27 EMBL:Z75212 PIR:S67208
RefSeq:NP_014948.1 ProteinModelPortal:Q08773 SMR:Q08773
DIP:DIP-6603N IntAct:Q08773 MINT:MINT-469536 STRING:Q08773
PaxDb:Q08773 PeptideAtlas:Q08773 PRIDE:Q08773 EnsemblFungi:YOR304W
GeneID:854480 KEGG:sce:YOR304W CYGD:YOR304w OMA:NEQSALS
NextBio:976792 Genevestigator:Q08773 GermOnline:YOR304W
Uniprot:Q08773
Length = 1120
Score = 508 (183.9 bits), Expect = 8.9e-72, Sum P(2) = 8.9e-72
Identities = 123/325 (37%), Positives = 181/325 (55%)
Query: 237 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 296
+ P F+ +G +L YQ++G+NWL + ILADEMGLGKT+QTI+FL L
Sbjct: 174 ESPSFVK-SG-KLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQ 231
Query: 297 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRI-VLRDHDISWEDTANRGGK 355
+GPFL+ P ST+ NW REF W P+ V+ GDKD R ++R+ I E
Sbjct: 232 IEGPFLIIVPKSTLDNWRREFLKWTPNVNVLVLHGDKDTRADIVRN--IILE-------- 281
Query: 356 PCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSI 415
+F VL+TSYE++ + L + W +V+DEAHR+K+ QS + + +
Sbjct: 282 --------ARFDVLITSYEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYS 333
Query: 416 QNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQ----VKRLHDLL 471
+N+LL+TGTP P+ F D F F + E+ +++LH +L
Sbjct: 334 KNRLLITGTPLQNNLHELWALLNFLLPDIFGDSELFDEWFEQNNSEQDQEIVIQQLHSVL 393
Query: 472 GPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQ--VSL 529
P +LRR+KADV K++ K E V V ++ MQ ++YK +L ++ +A+N G ++ L
Sbjct: 394 NPFLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKTRL 453
Query: 530 LNIMMDLKKCCNHPYLFPAAAEEAP 554
LNI+M L+KCCNHPYLF A E P
Sbjct: 454 LNIVMQLRKCCNHPYLFEGA-EPGP 477
Score = 301 (111.0 bits), Expect = 8.9e-72, Sum P(2) = 8.9e-72
Identities = 56/97 (57%), Positives = 74/97 (76%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M+++LDILEDY ++Y RIDG+ + R E+ID +N P + +FVFLL+TR+GGL
Sbjct: 512 FSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEYNKPNSEKFVFLLTTRAGGL 571
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
GINL TADTVI++DSDWNP D+QA RAHRIGQ+ +
Sbjct: 572 GINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQ 608
Score = 259 (96.2 bits), Expect = 2.4e-67, Sum P(2) = 2.4e-67
Identities = 54/116 (46%), Positives = 79/116 (68%)
Query: 719 DWN-PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 777
++N P+++ F R G INL TADTVI++DSDWNP D+QA RAHRIGQ+ +
Sbjct: 551 EYNKPNSEKFVFLLTTRAGGLG--INLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQ 608
Query: 778 VMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQANF--TKQELDDILRFG 831
V +YRFVT N++EE+V + A +K+ L LV++ G G K A+ +K +L D+++FG
Sbjct: 609 VHVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTASLGNSKDDLLDMIQFG 664
>ASPGD|ASPL0000048785 [details] [associations]
symbol:AN1956 species:162425 "Emericella nidulans"
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0033553 "rDNA
heterochromatin" evidence=IEA] [GO:0044732 "mitotic spindle pole
body" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0031934 "mating-type region heterochromatin"
evidence=IEA] [GO:0031933 "telomeric heterochromatin" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0030702 "chromatin silencing at centromere" evidence=IEA]
InterPro:IPR000014 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00091 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 EMBL:BN001307 GO:GO:0008270 GO:GO:0004871
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
EMBL:AACD01000029 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
OrthoDB:EOG4GQTD1 RefSeq:XP_659560.1 ProteinModelPortal:Q5BBX4
EnsemblFungi:CADANIAT00008616 GeneID:2875239 KEGG:ani:AN1956.2
HOGENOM:HOG000192830 OMA:SFARVWA Uniprot:Q5BBX4
Length = 1443
Score = 500 (181.1 bits), Expect = 4.9e-71, Sum P(4) = 4.9e-71
Identities = 148/456 (32%), Positives = 220/456 (48%)
Query: 160 VKWRDLPYDKATWEDENEDIPGLKESIEFYNXXXXXXXXXXXXXELQEDEDGASGSKPRR 219
VK++ LPY+ A WE +P + + E +N D A KP
Sbjct: 531 VKFKGLPYEDAVWE-----VPPDRSNTEAWNDFKAAYA------------DWAK--KPFI 571
Query: 220 YTPPP---EKPTTDLRK-KY---EKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTIL 272
TP +K ++RK K+ E QP + TG ++ YQ +G+NWL + W + + IL
Sbjct: 572 STPNQISLQKHLANVRKQKFKSREAQPRIM--TGGEIMDYQRDGLNWLYFKWFKQQNAIL 629
Query: 273 ADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGD 332
ADEMGLGKTIQ I L +L ++ C PFL+ P ST NW +E +TW P VTY G
Sbjct: 630 ADEMGLGKTIQVIGLLATLVQDHKC-WPFLIVVPNSTCPNWRKELKTWVPSLRAVTYYGS 688
Query: 333 KDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVA--LLGSIEWAV 390
R + ++H++ G P ++ HV++TSYE + +D +L I WA
Sbjct: 689 SLARKMAQEHEMFIR------GDP------DLRCHVVITSYETMVDDSCRKVLSRIPWAG 736
Query: 391 LVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTS 450
L+VDE RLKS++S+ ++ LS K+L+TGTP K +
Sbjct: 737 LIVDEGQRLKSDKSQIYEGLSKMKFPFKVLMTGTPLQNNTKELFNLLQFCDQSK--NAEE 794
Query: 451 FQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYI 510
+ ++ +SKE + LH+L+ P LRR KA VL +P + IV V +S +QKK YK I
Sbjct: 795 LEEKYGTLSKEN-IPELHELIRPFFLRRTKAQVLTFLPPVVQIIVPVTMSVLQKKLYKSI 853
Query: 511 LTRNFEALN----------PKGGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAPVQGGQY 560
L +N + + P ++ +L NI+M L+KC HP++F A EE +
Sbjct: 854 LAKNTQLIKAIFQRNEEDQPLKQTERHNLNNILMQLRKCLCHPFIFSKAIEER-TDDPEV 912
Query: 561 EIQALTRAAGXXXXXXXXXXXXXEDGHRYGIKPEWL 596
+ L AAG GHR + ++L
Sbjct: 913 AHRNLVDAAGKLQLLELMLPKLQARGHRVLVFSQFL 948
Score = 305 (112.4 bits), Expect = 4.9e-71, Sum P(4) = 4.9e-71
Identities = 58/99 (58%), Positives = 73/99 (73%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F + LD++ED+LDG G + R+DG +T +Q ID +NA + F FLLSTRSGG+
Sbjct: 944 FSQFLENLDVMEDFLDGLGLPHRRLDGRMTSLEKQRMIDDYNAENSPYFAFLLSTRSGGV 1003
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYI 742
GINLATADTVII D D+NPH D+QA SRAHRIGQ+NK +
Sbjct: 1004 GINLATADTVIIMDPDFNPHQDMQALSRAHRIGQKNKVL 1042
Score = 239 (89.2 bits), Expect = 3.7e-64, Sum P(4) = 3.7e-64
Identities = 52/114 (45%), Positives = 76/114 (66%)
Query: 719 DWNPHNDIQ-AFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 777
D+N N AF + R G INLATADTVII D D+NPH D+QA SRAHRIGQ+NK
Sbjct: 983 DYNAENSPYFAFLLSTRSGGVG--INLATADTVIIMDPDFNPHQDMQALSRAHRIGQKNK 1040
Query: 778 VMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQANFTKQELDDILRFG 831
V++++ + R S EE++ Q+ ++KM+L H+++ M + + ++L+ ILR G
Sbjct: 1041 VLVFQLMIRGSAEEKIMQIGRKKMVLDHVLI-DRMAAEDDD--GEDLESILRHG 1091
Score = 51 (23.0 bits), Expect = 4.9e-71, Sum P(4) = 4.9e-71
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 158 YLVKWRDLPYDKATW 172
YL+KW++ Y TW
Sbjct: 440 YLIKWKEKSYAHCTW 454
Score = 51 (23.0 bits), Expect = 4.4e-22, Sum P(3) = 4.4e-22
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 614 YLVKWRDLPYDKATW 628
YL+KW++ Y TW
Sbjct: 440 YLIKWKEKSYAHCTW 454
Score = 50 (22.7 bits), Expect = 1.1e-22, Sum P(4) = 1.1e-22
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 616 VKWRDLPYDKATWE 629
VK++ LPY+ A WE
Sbjct: 531 VKFKGLPYEDAVWE 544
Score = 42 (19.8 bits), Expect = 4.9e-71, Sum P(4) = 4.9e-71
Identities = 7/42 (16%), Positives = 17/42 (40%)
Query: 87 SYMKKMNNDFTXXXXXXXXXXXXXKRMARLNRHNINDEELEK 128
+Y +NN F ++ R N H + ++++ +
Sbjct: 181 NYHSTLNNGFGANAHSRTRASTRSRKPLRYNLHEMYEDDISE 222
>WB|WBGene00016868 [details] [associations]
symbol:C52B9.8 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:FO080644 PIR:T28937 RefSeq:NP_508736.1
ProteinModelPortal:Q22944 SMR:Q22944 STRING:Q22944 PaxDb:Q22944
EnsemblMetazoa:C52B9.8 GeneID:180705 KEGG:cel:CELE_C52B9.8
UCSC:C52B9.8 CTD:180705 WormBase:C52B9.8 InParanoid:Q22944
NextBio:910548 Uniprot:Q22944
Length = 1336
Score = 503 (182.1 bits), Expect = 1.3e-70, Sum P(4) = 1.3e-70
Identities = 118/319 (36%), Positives = 179/319 (56%)
Query: 247 MQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAP 306
++L YQ++G+ W+ + N++ ILADEMGLGKTIQTI F+ L + GPFLV P
Sbjct: 364 LKLKPYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIAFITYLMEIKKTSGPFLVIVP 423
Query: 307 LSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKF 366
LST+ NW+ EF+ WA + +++ Y G K+ R V +P I+S KF
Sbjct: 424 LSTVPNWQNEFDKWAANVHLIAYKGPKETRKVF---------------EPI-IKSG--KF 465
Query: 367 HVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSG-YSIQNKLLLTGTP 425
+VLLT++E + + ALLG + W +++DE HRLK+ K + L+ + Q +LL+TGTP
Sbjct: 466 NVLLTTFEYVIREKALLGKLRWKYMIIDEGHRLKNQHCKLTEMLNTRFQCQRRLLITGTP 525
Query: 426 XXXXXXXXXXXXXXXTPEKFNDLTSFQ----AEFA------DISKEEQ---VKRLHDLLG 472
P F+ ++F+ A FA ++++EE ++RLH +L
Sbjct: 526 LQNKLPELWALLNFLLPSIFSSCSTFEQWFNAPFATTGEKVELTQEETMLIIRRLHKVLR 585
Query: 473 PHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNI 532
P +LRRLK +V +P K EF+VR ++S +QK YK++ + L+ K SL N
Sbjct: 586 PFLLRRLKKEVESELPDKMEFVVRCDMSALQKVLYKHM--QKGLLLDGKTNTGSKSLRNT 643
Query: 533 MMDLKKCCNHPYLFPAAAE 551
M+ L+K CNHP+LF E
Sbjct: 644 MIHLRKLCNHPFLFENVEE 662
Score = 306 (112.8 bits), Expect = 1.3e-70, Sum P(4) = 1.3e-70
Identities = 59/109 (54%), Positives = 79/109 (72%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F+ MT M+ I+ED+L G +Y R+DG+ R +D+FNAP + F+F+LSTR+GGL
Sbjct: 705 FFQMTSMMTIVEDFLAGGTIQYLRLDGSTKPDERGALLDKFNAPNSEYFLFMLSTRAGGL 764
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV 750
G+NL TADTVII+DSDWNPH D+QA RAHRIGQ+ + L TA++V
Sbjct: 765 GLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKAEVRVFRLITANSV 813
Score = 218 (81.8 bits), Expect = 1.9e-61, Sum P(4) = 1.9e-61
Identities = 45/110 (40%), Positives = 71/110 (64%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
P+++ F + R G +NL TADTVII+DSDWNPH D+QA RAHRIGQ+ +V ++
Sbjct: 748 PNSEYFLFMLSTRAGGLG--LNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKAEVRVF 805
Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRPG-MGGKQANFTKQE-LDDILR 829
R +T NSVEE++ A+ K+ + V++ G + ++E L++I++
Sbjct: 806 RLITANSVEEKILAAARYKLNVDEKVIQAGKFDNRSTGAERREILENIIK 855
Score = 44 (20.5 bits), Expect = 1.3e-70, Sum P(4) = 1.3e-70
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 910 RRSAK--KKEMSKQERDRPLPPLLARVGGNIEVLNQLEELLSDMKSDVSRLPA 960
R+ AK K++ +QE D L LAR E +LE+ S+ + L A
Sbjct: 1281 RKEAKRLKRQKEEQEDDAKLQEKLARKAAKKEQ-KRLEKEKSESSTGTVNLSA 1332
Score = 38 (18.4 bits), Expect = 1.3e-70, Sum P(4) = 1.3e-70
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 850 KQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQT 890
+ E+++ D + K +H E H ++ + K K K T
Sbjct: 1038 RSESDSDDNSL-KKEKKHRKEDHPKEKEKEKKKEKEQEKST 1077
>WB|WBGene00004204 [details] [associations]
symbol:swsn-4 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0040010 GO:GO:0006355
GO:GO:0003677 GO:GO:0040035 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 OMA:QKKYTIS InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:Z68751 EMBL:Z68341 EMBL:AF230280 PIR:T20488
RefSeq:NP_502082.1 UniGene:Cel.23435 ProteinModelPortal:G5EF53
SMR:G5EF53 EnsemblMetazoa:F01G4.1 GeneID:178015
KEGG:cel:CELE_F01G4.1 CTD:178015 WormBase:F01G4.1 NextBio:899366
Uniprot:G5EF53
Length = 1474
Score = 315 (115.9 bits), Expect = 2.0e-70, Sum P(3) = 2.0e-70
Identities = 73/175 (41%), Positives = 108/175 (61%)
Query: 635 IPGLKES----IEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGAS 690
+P LK + + F+ MT M++I ED+L+ Y Y R+DG+ R + + +FNAP +
Sbjct: 859 LPKLKATGHRILMFFQMTSMMNIFEDFLNFRRYTYLRLDGSTKPDERGDLLTQFNAPNSD 918
Query: 691 QFVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATAD 748
F+F+LSTR+GGLG+NL TADTVII+DSDWNPH D+QA RAHRIGQ+ + + L TA+
Sbjct: 919 LFLFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKKEVRVLRLITAN 978
Query: 749 TV---IIYDSDWNPHND---IQAFSRAHR-IGQQNKVMIYRFVTRNSVEERVTQV 796
+V I+ + + + D IQA R G + K M+ + + + EE +V
Sbjct: 979 SVEEKILAAARYKLNVDEKVIQAGKFDQRSTGAERKQMLEQIIQADGEEEEEEEV 1033
Score = 312 (114.9 bits), Expect = 2.0e-70, Sum P(3) = 2.0e-70
Identities = 77/239 (32%), Positives = 123/239 (51%)
Query: 366 FHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGY-SIQNKLLLTGT 424
F+VL+T+YE + + ALLG I W +++DE HRLK++ K L+G+ Q++LLLTGT
Sbjct: 632 FNVLMTTYEYVIKEKALLGKIRWKYMIIDEGHRLKNHNCKLTLMLNGFFHAQHRLLLTGT 691
Query: 425 PXXXXXXXXXXXXXXXTPEKFNDLTSFQ----AEFA------DISKEEQ---VKRLHDLL 471
P P F+ +F+ A FA ++++EE ++RLH +L
Sbjct: 692 PLQNKLPELWALLNFLLPSIFSSCGTFEQWFNAPFATTGEKVELNQEETMLIIRRLHKVL 751
Query: 472 GPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLN 531
P +LRRLK +V +P K+E++++ + S +QK Y+++ + L+ K SL+N
Sbjct: 752 RPFLLRRLKKEVESQLPDKTEYVIKCDQSALQKVIYRHM--QKGLLLDAKMSSGARSLMN 809
Query: 532 IMMDLKKCCNHPYLFPAAAEEAPVQGGQYEIQA--LTRAAGXXXXXXXXXXXXXEDGHR 588
++ L+K CNHP+LFP + E+ L R AG GHR
Sbjct: 810 TVVHLRKLCNHPFLFPNIEDSCRAYWKVNEVNGTDLMRVAGKLELLDRILPKLKATGHR 868
Score = 235 (87.8 bits), Expect = 2.0e-70, Sum P(3) = 2.0e-70
Identities = 57/181 (31%), Positives = 86/181 (47%)
Query: 158 YLVKWRDLPYDKATWEDENEDIPGLKESIEFYNXXXXXXXXXXXXXELQEDEDGASGSKP 217
Y + RD D E+E + +E + Y + + +ED K
Sbjct: 441 YEIVPRDQLSDDEEEEEEEAPVEPEEEKDDQYAGMDEETKAKMILEKARNEEDEYD-QKT 499
Query: 218 RRYTPPPEKPTTDLRKKYEKQPPFLD--DTGMQLHAYQLEGINWLRYSWGQNIDTILADE 275
++ +++K KQ + D + L YQ++G+ W+ + N++ ILADE
Sbjct: 500 KKQMADYYATAHKIKEKVVKQHTTMGGGDPNLLLKPYQIKGLEWMVSLYNNNLNGILADE 559
Query: 276 MGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDC 335
MGLGKTIQTI+ + L + GP+LV PLST+ NW+ EF WAP + Y G KD
Sbjct: 560 MGLGKTIQTISLVTYLMEVKQNNGPYLVIVPLSTLSNWQNEFAKWAPSVTTIIYKGTKDA 619
Query: 336 R 336
R
Sbjct: 620 R 620
Score = 225 (84.3 bits), Expect = 5.5e-61, Sum P(3) = 5.5e-61
Identities = 47/110 (42%), Positives = 71/110 (64%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
P++D+ F + R G +NL TADTVII+DSDWNPH D+QA RAHRIGQ+ +V +
Sbjct: 915 PNSDLFLFMLSTRAGGLG--LNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKKEVRVL 972
Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQANFT--KQELDDILR 829
R +T NSVEE++ A+ K+ + V++ G +++ KQ L+ I++
Sbjct: 973 RLITANSVEEKILAAARYKLNVDEKVIQAGKFDQRSTGAERKQMLEQIIQ 1022
Score = 39 (18.8 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 13/53 (24%), Positives = 26/53 (49%)
Query: 441 TPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEF 493
TP + N L + + + +++ EQV +L+ ++ R K L +P E+
Sbjct: 88 TPAQLNQLRAQVSAYRLLARNEQVPA--NLIADAVMLRPKVTTL--LPEPYEY 136
>CGD|CAL0005444 [details] [associations]
symbol:SNF2 species:5476 "Candida albicans" [GO:0016514
"SWI/SNF complex" evidence=IPI] [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IEA] [GO:0031492 "nucleosomal DNA
binding" evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:1900430 "positive regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:1900442 "positive regulation of filamentous growth of a
population of unicellular organisms in response to neutral pH"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:1900445 "positive regulation of filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0042766 "nucleosome mobilization" evidence=IEA]
[GO:0005987 "sucrose catabolic process" evidence=IEA] [GO:1900231
"regulation of single-species biofilm formation on inanimate
substrate" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0042148 "strand invasion"
evidence=IEA] [GO:0044109 "cellular alcohol catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0031496 "positive regulation of mating type
switching" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IEA] [GO:0061412 "positive regulation of
transcription from RNA polymerase II promoter in response to amino
acid starvation" evidence=IEA] [GO:0036244 "cellular response to
neutral pH" evidence=IMP] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
Length = 1690
Score = 498 (180.4 bits), Expect = 4.0e-70, Sum P(4) = 4.0e-70
Identities = 125/336 (37%), Positives = 184/336 (54%)
Query: 231 LRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYS 290
++++ KQP L G L YQL+G+ W+ + +++ ILADEMGLGKTIQTI+ L
Sbjct: 765 IKEEVTKQPSIL--VGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTY 822
Query: 291 LFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTA 350
L + GPFLV PLST+ NW EFE WAP +TY G + R V++ HDI T
Sbjct: 823 LVEVKKIPGPFLVIVPLSTVTNWNLEFEKWAPSIKKITYKGTPNQRKVMQ-HDIR---TG 878
Query: 351 NRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFL 410
N F ++LT++E + D LLG I+W +++DE HR+K+ SK + L
Sbjct: 879 N--------------FQLVLTTFEYVIKDKGLLGRIKWVHMIIDEGHRMKNANSKLSETL 924
Query: 411 S-GYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQ----AEFA--------D 457
+ Y +L+LTGTP P+ FN + SF FA +
Sbjct: 925 TQNYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIE 984
Query: 458 ISKEEQ---VKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRN 514
+++EE ++RLH +L P +LRRLK DV K++P+K E +V+ + S +Q K Y+ +L N
Sbjct: 985 LTEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPNKVEKVVKCKSSALQSKLYQQMLRYN 1044
Query: 515 F-EALNPKGGGQQVSLLNI---MMDLKKCCNHPYLF 546
A +P G V++ N +M LKK CNHP+++
Sbjct: 1045 MLYAGDPANGSVPVTIKNANNQIMQLKKICNHPFVY 1080
Score = 308 (113.5 bits), Expect = 4.0e-70, Sum P(4) = 4.0e-70
Identities = 58/109 (53%), Positives = 79/109 (72%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F+ MT++++I+ED+L G KY R+DG R + + FNAP + F FLLSTR+GGL
Sbjct: 1124 FFQMTQIMNIMEDFLRFRGMKYMRLDGGTKADDRTDLLKSFNAPDSDYFCFLLSTRAGGL 1183
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV 750
G+NL TADTVII+D+DWNPH D+QA RAHRIGQ+N + + L T ++V
Sbjct: 1184 GLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITENSV 1232
Score = 223 (83.6 bits), Expect = 2.8e-61, Sum P(4) = 2.8e-61
Identities = 46/102 (45%), Positives = 65/102 (63%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
P +D F + R G +NL TADTVII+D+DWNPH D+QA RAHRIGQ+N+V I
Sbjct: 1167 PDSDYFCFLLSTRAGGLG--LNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRIL 1224
Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQANFTKQE 823
R +T NSVEE + + A +K+ + V++ G ++ +QE
Sbjct: 1225 RLITENSVEEMILERAHKKLEIDGKVIQAGKFDNKSTAEEQE 1266
Score = 47 (21.6 bits), Expect = 4.0e-70, Sum P(4) = 4.0e-70
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 204 ELQEDEDGASGSKPRRYTPPPEKPTT-DLRKKYEKQPPFLDDTGMQLHAYQLE 255
E+ E + G G KP+ P+KPT LR+ E+Q L+ +L +L+
Sbjct: 320 EIPEKKKGKRGPKPKN----PKKPTKKQLRE--EEQRLALEKQRQELEQNRLK 366
Score = 41 (19.5 bits), Expect = 4.0e-70, Sum P(4) = 4.0e-70
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 3 PGAKDIDLAIQRGHWEHRRY 22
P +DI AIQR H ++Y
Sbjct: 5 PTREDIQRAIQRWHQMKQQY 24
Score = 38 (18.4 bits), Expect = 1.1e-20, Sum P(3) = 1.1e-20
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 228 TTDLRKKY--EKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNID 269
T D R + E+ FLD + + + Q E + L YS G+ I+
Sbjct: 699 TKDTRITHLLEQTNQFLDSLALAVQSQQKEAQDNLAYS-GRAIE 741
>UNIPROTKB|Q5AM49 [details] [associations]
symbol:SNF2 "Putative uncharacterized protein SNF2"
species:237561 "Candida albicans SC5314" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=IPI] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0036244 "cellular
response to neutral pH" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
[GO:1900430 "positive regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:1900442
"positive regulation of filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:1900445 "positive regulation of filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
Length = 1690
Score = 498 (180.4 bits), Expect = 4.0e-70, Sum P(4) = 4.0e-70
Identities = 125/336 (37%), Positives = 184/336 (54%)
Query: 231 LRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYS 290
++++ KQP L G L YQL+G+ W+ + +++ ILADEMGLGKTIQTI+ L
Sbjct: 765 IKEEVTKQPSIL--VGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTY 822
Query: 291 LFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTA 350
L + GPFLV PLST+ NW EFE WAP +TY G + R V++ HDI T
Sbjct: 823 LVEVKKIPGPFLVIVPLSTVTNWNLEFEKWAPSIKKITYKGTPNQRKVMQ-HDIR---TG 878
Query: 351 NRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFL 410
N F ++LT++E + D LLG I+W +++DE HR+K+ SK + L
Sbjct: 879 N--------------FQLVLTTFEYVIKDKGLLGRIKWVHMIIDEGHRMKNANSKLSETL 924
Query: 411 S-GYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQ----AEFA--------D 457
+ Y +L+LTGTP P+ FN + SF FA +
Sbjct: 925 TQNYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIE 984
Query: 458 ISKEEQ---VKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRN 514
+++EE ++RLH +L P +LRRLK DV K++P+K E +V+ + S +Q K Y+ +L N
Sbjct: 985 LTEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPNKVEKVVKCKSSALQSKLYQQMLRYN 1044
Query: 515 F-EALNPKGGGQQVSLLNI---MMDLKKCCNHPYLF 546
A +P G V++ N +M LKK CNHP+++
Sbjct: 1045 MLYAGDPANGSVPVTIKNANNQIMQLKKICNHPFVY 1080
Score = 308 (113.5 bits), Expect = 4.0e-70, Sum P(4) = 4.0e-70
Identities = 58/109 (53%), Positives = 79/109 (72%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F+ MT++++I+ED+L G KY R+DG R + + FNAP + F FLLSTR+GGL
Sbjct: 1124 FFQMTQIMNIMEDFLRFRGMKYMRLDGGTKADDRTDLLKSFNAPDSDYFCFLLSTRAGGL 1183
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV 750
G+NL TADTVII+D+DWNPH D+QA RAHRIGQ+N + + L T ++V
Sbjct: 1184 GLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITENSV 1232
Score = 223 (83.6 bits), Expect = 2.8e-61, Sum P(4) = 2.8e-61
Identities = 46/102 (45%), Positives = 65/102 (63%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
P +D F + R G +NL TADTVII+D+DWNPH D+QA RAHRIGQ+N+V I
Sbjct: 1167 PDSDYFCFLLSTRAGGLG--LNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRIL 1224
Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQANFTKQE 823
R +T NSVEE + + A +K+ + V++ G ++ +QE
Sbjct: 1225 RLITENSVEEMILERAHKKLEIDGKVIQAGKFDNKSTAEEQE 1266
Score = 47 (21.6 bits), Expect = 4.0e-70, Sum P(4) = 4.0e-70
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 204 ELQEDEDGASGSKPRRYTPPPEKPTT-DLRKKYEKQPPFLDDTGMQLHAYQLE 255
E+ E + G G KP+ P+KPT LR+ E+Q L+ +L +L+
Sbjct: 320 EIPEKKKGKRGPKPKN----PKKPTKKQLRE--EEQRLALEKQRQELEQNRLK 366
Score = 41 (19.5 bits), Expect = 4.0e-70, Sum P(4) = 4.0e-70
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 3 PGAKDIDLAIQRGHWEHRRY 22
P +DI AIQR H ++Y
Sbjct: 5 PTREDIQRAIQRWHQMKQQY 24
Score = 38 (18.4 bits), Expect = 1.1e-20, Sum P(3) = 1.1e-20
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 228 TTDLRKKY--EKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNID 269
T D R + E+ FLD + + + Q E + L YS G+ I+
Sbjct: 699 TKDTRITHLLEQTNQFLDSLALAVQSQQKEAQDNLAYS-GRAIE 741
>ZFIN|ZDB-GENE-040426-892 [details] [associations]
symbol:chd1l "chromodomain helicase DNA binding
protein 1-like" species:7955 "Danio rerio" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0000166 "nucleotide binding" evidence=IEA;ISS] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 InterPro:IPR001357
ZFIN:ZDB-GENE-040426-892 GO:GO:0005524 GO:GO:0005634 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 GO:GO:0006974 GO:GO:0016887
GO:GO:0006338 GO:GO:0004386 SUPFAM:SSF52113 PROSITE:PS50172
HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154 CTD:9557
HOGENOM:HOG000030789 HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV
EMBL:BC050498 IPI:IPI00482841 RefSeq:NP_956607.1 UniGene:Dr.84280
ProteinModelPortal:Q7ZU90 PRIDE:Q7ZU90 GeneID:393283
KEGG:dre:393283 InParanoid:Q7ZU90 NextBio:20814340
ArrayExpress:Q7ZU90 Uniprot:Q7ZU90
Length = 1026
Score = 361 (132.1 bits), Expect = 7.5e-70, Sum P(4) = 7.5e-70
Identities = 85/229 (37%), Positives = 120/229 (52%)
Query: 362 STVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLL 421
S +FHVLLT+YE+ D L S +W +LVVDEAHRLK+ +S + L +++ ++LL
Sbjct: 131 SDPRFHVLLTTYEMCLKDARYLKSWKWKILVVDEAHRLKNQESLLHQTLKEFTVGFRVLL 190
Query: 422 TGTPXXXXXXXXXXXXXXXTPEKF--NDLTSFQAEFADISKEEQ-VKRLHDLLGPHMLRR 478
TGTP P F + F +ADI E V LH +L P +LRR
Sbjct: 191 TGTPIQNNLQEVYSLLTFIQPSVFLPEAVEDFVNAYADIQTEPALVDELHQVLQPFLLRR 250
Query: 479 LKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKK 538
+KA+V +P K+E +V LS +QK+YYK IL R+ +A + LLN++M L+K
Sbjct: 251 VKAEVAAELPKKTELVVFHGLSALQKRYYKAILMRDLDAFRTDQS-TKTRLLNVLMQLRK 309
Query: 539 CCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGH 587
C +HPYLF E P + G++ L A+G E GH
Sbjct: 310 CVDHPYLFDGVEPE-PFEMGEH----LVEASGKLSLLDSMLAYLQEGGH 353
Score = 294 (108.6 bits), Expect = 7.5e-70, Sum P(4) = 7.5e-70
Identities = 61/114 (53%), Positives = 78/114 (68%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MT+MLDIL+DYL+ GY YER+DG++ G R +I F+ F+FLLST++GG+
Sbjct: 358 FSQMTRMLDILQDYLEYRGYSYERLDGSVRGEERNLAIKNFSTKDV--FIFLLSTKAGGV 415
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV--IIY 753
G+NL ADTVI D D+NP ND+QA +RAHRIGQ K I L DT+ IIY
Sbjct: 416 GMNLTAADTVIFVDGDFNPQNDLQAAARAHRIGQTRPVKVIRLLGRDTIEEIIY 469
Score = 198 (74.8 bits), Expect = 7.5e-70, Sum P(4) = 7.5e-70
Identities = 47/121 (38%), Positives = 64/121 (52%)
Query: 224 PEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQ 283
PEK ++L + K+ + L YQL+G+ WL IL DEMGLGKT Q
Sbjct: 13 PEKDKSELTENDLKKWGL---GAIHLRPYQLDGVKWLSLCMKNQQGCILGDEMGLGKTCQ 69
Query: 284 TITFLYSLFKEGHCK--GPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRD 341
TI+ L + G K GPFLV PL+ + NW +E E + P V+ Y GDK+ R L+
Sbjct: 70 TISLL--AYARGSLKMNGPFLVLCPLAVLENWRQELERFCPSLSVICYTGDKEKRAELQQ 127
Query: 342 H 342
+
Sbjct: 128 N 128
Score = 178 (67.7 bits), Expect = 2.2e-58, Sum P(3) = 2.2e-58
Identities = 39/94 (41%), Positives = 57/94 (60%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL ADTVI D D+NP ND+QA +RAHRIGQ V + R + R+++EE + A K+
Sbjct: 417 MNLTAADTVIFVDGDFNPQNDLQAAARAHRIGQTRPVKVIRLLGRDTIEEIIYSRAVSKL 476
Query: 802 MLTHLVVRPG----MGGKQANFTKQELDDILRFG 831
LT V+ G + Q+ + +L +IL+FG
Sbjct: 477 RLTDTVIEEGRFSLLDQAQSAASGLQLSEILKFG 510
Score = 38 (18.4 bits), Expect = 7.5e-70, Sum P(4) = 7.5e-70
Identities = 15/68 (22%), Positives = 28/68 (41%)
Query: 762 DIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQANFTK 821
D A A + + NK+ R + +++ + AK+K HL P +G F
Sbjct: 789 DYLALIVAQQRDKANKLSGIRLTALDEGLKKIYKAAKQKKASVHL---PRIGHSTKGFNW 845
Query: 822 QELDDILR 829
+ ++R
Sbjct: 846 YGTERLIR 853
>UNIPROTKB|G4NCV5 [details] [associations]
symbol:MGG_01012 "ISWI chromatin-remodeling complex ATPase
ISW2" species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 EMBL:CM001235 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
SUPFAM:SSF101224 RefSeq:XP_003717932.1 EnsemblFungi:MGG_01012T0
GeneID:2674262 KEGG:mgr:MGG_01012 Uniprot:G4NCV5
Length = 1128
Score = 492 (178.3 bits), Expect = 1.8e-69, Sum P(3) = 1.8e-69
Identities = 118/324 (36%), Positives = 177/324 (54%)
Query: 235 YEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKE 294
+ + P F+ T + YQ+ G+NWL I ILADEMGLGKT+QTI+FL L
Sbjct: 175 FRESPAFIQGT---MRDYQIAGLNWLISLHENGISGILADEMGLGKTLQTISFLGYLRHI 231
Query: 295 GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGG 354
GP LV P ST+ NW+REF W P+ V+ G K+ R L A R
Sbjct: 232 MGITGPHLVIVPKSTLDNWKREFGKWTPEVNVLVLQGAKEERAAL---------IAER-- 280
Query: 355 KPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYS 414
+ S F V +TSYE+I + + L W +++DEAHR+K+ +S + + ++
Sbjct: 281 ---LVDES---FDVCITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLAQVIRLFN 334
Query: 415 IQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQ--VKRLHDLLG 472
+N+LL+TGTP P+ F D +F F+ ++ V++LH +L
Sbjct: 335 SRNRLLITGTPLQNNIHELWALLNFLLPDVFGDSEAFDQWFSGEGQDSDTVVQQLHRVLR 394
Query: 473 PHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQ--VSLL 530
P +LRR+KADV K++ K E + ++++ MQ+ +Y+ IL ++ +A+N G ++ LL
Sbjct: 395 PFLLRRVKADVEKSLLPKKEVNLYLKMTEMQRTWYQKILEKDIDAVNGANGKRESKTRLL 454
Query: 531 NIMMDLKKCCNHPYLFPAAAEEAP 554
NI+M L+KCCNHPYLF A E P
Sbjct: 455 NIVMQLRKCCNHPYLFEGA-EPGP 477
Score = 304 (112.1 bits), Expect = 1.8e-69, Sum P(3) = 1.8e-69
Identities = 60/109 (55%), Positives = 74/109 (67%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M+++LDILEDY YKY RIDG R +ID +N PG+ +FVFLL+TR+GGL
Sbjct: 512 FSQMSRVLDILEDYCVFREYKYSRIDGGTAHEDRIAAIDEYNKPGSEKFVFLLTTRAGGL 571
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK-YINLATADTVI 751
GINL TAD VI++DSDWNP D+QA RAHRIGQ + Y+ D I
Sbjct: 572 GINLTTADIVILFDSDWNPQADLQAMDRAHRIGQTKQVYVYRFLVDNTI 620
Score = 218 (81.8 bits), Expect = 3.4e-61, Sum P(2) = 3.4e-61
Identities = 50/126 (39%), Positives = 71/126 (56%)
Query: 708 ATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFS 767
A D + D P ++ F R G INL TAD VI++DSDWNP D+QA
Sbjct: 541 AHEDRIAAIDEYNKPGSEKFVFLLTTRAGGLG--INLTTADIVILFDSDWNPQADLQAMD 598
Query: 768 RAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMG--GKQANFTKQELD 825
RAHRIGQ +V +YRF+ N++EE+V + A +K+ L LV++ G +A K EL
Sbjct: 599 RAHRIGQTKQVYVYRFLVDNTIEEKVLERAAQKLHLDRLVIQQGRAQVAAKAAANKDELL 658
Query: 826 DILRFG 831
+++ G
Sbjct: 659 SMIQHG 664
Score = 44 (20.5 bits), Expect = 6.7e-43, Sum P(2) = 6.7e-43
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 718 SDWNPHNDIQAF-SRAHRIGQQNKYINLAT 746
S+WN D Q F + H+ G+ N + +AT
Sbjct: 866 SEWN-RRDFQQFVNGCHKFGR-NDFEGIAT 893
Score = 38 (18.4 bits), Expect = 1.8e-69, Sum P(3) = 1.8e-69
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 755 SDWNPHNDIQAF-SRAHRIGQQN 776
S+WN D Q F + H+ G+ +
Sbjct: 866 SEWN-RRDFQQFVNGCHKFGRND 887
>CGD|CAL0003962 [details] [associations]
symbol:orf19.239 species:5476 "Candida albicans" [GO:0016586
"RSC complex" evidence=IEA] [GO:0007059 "chromosome segregation"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0031055 "chromatin remodeling at
centromere" evidence=IEA] [GO:0006337 "nucleosome disassembly"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=IEA] [GO:0015616
"DNA translocase activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0003962 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
EMBL:AACQ01000027 EMBL:AACQ01000026 InterPro:IPR014012
PROSITE:PS51204 KO:K11786 RefSeq:XP_719938.1 RefSeq:XP_720068.1
ProteinModelPortal:Q5AEM9 STRING:Q5AEM9 GeneID:3638290
GeneID:3638351 KEGG:cal:CaO19.239 KEGG:cal:CaO19.7869
Uniprot:Q5AEM9
Length = 1303
Score = 463 (168.0 bits), Expect = 1.8e-69, Sum P(2) = 1.8e-69
Identities = 132/427 (30%), Positives = 215/427 (50%)
Query: 231 LRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYS 290
+++K +QP L G +L YQ++G+ W+ + +++ ILADEMGLGKTIQ+I+ +
Sbjct: 485 IKEKITEQPTIL--VGGKLKEYQMKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLVTY 542
Query: 291 LFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTA 350
L ++ H + FL+ PLSTI NW EFE WAP V+ Y G + R L+ DI
Sbjct: 543 LIEKKH-ENKFLIIVPLSTITNWTLEFEKWAPSIKVIVYKGSQQQRRSLQP-DI------ 594
Query: 351 NRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFL 410
R G F VLLT+YE + + +L ++ +++DE HR+K+ QSK + L
Sbjct: 595 -RYGN----------FQVLLTTYEYVIRERPMLAKFHYSHMIIDEGHRMKNAQSKLSQTL 643
Query: 411 -SGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQ----AEFA--------D 457
+ Y +N+L+LTGTP P FN + SF FA +
Sbjct: 644 RTYYKTKNRLILTGTPLQNNLPELWALLNFVLPGIFNSVKSFDDWFNTPFANTGAQEKIE 703
Query: 458 ISKEEQ---VKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRN 514
+++EE ++RLH +L P +LRRLK DV K++P K E +++ LS +Q Y+ +L N
Sbjct: 704 LTEEESLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCNLSGLQYVLYQQMLKHN 763
Query: 515 FEALNPKGGGQQVS---LLNIMMDLKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGX 571
+ GG + L N +M L+K CNHP++F E+ + + + R +G
Sbjct: 764 ALFVGADVGGAKSGIKGLNNKIMQLRKICNHPFVFEEV--ESVLNSSRLTNDLIWRVSGK 821
Query: 572 XXXXXXXXXXXXEDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPY---DKATW 628
+ GHR + + ++++ + D ++W+D+ Y D +T
Sbjct: 822 FELLDRVLPKFKKSGHRVLM---FFQMTQIMD--IMED-----FLRWKDMKYLRLDGSTK 871
Query: 629 EDENEDI 635
+E +D+
Sbjct: 872 AEERQDM 878
Score = 330 (121.2 bits), Expect = 1.8e-69, Sum P(2) = 1.8e-69
Identities = 93/266 (34%), Positives = 143/266 (53%)
Query: 635 IPGLKES----IEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGAS 690
+P K+S + F+ MT+++DI+ED+L + KY R+DG+ RQ+ + FNAP +
Sbjct: 829 LPKFKKSGHRVLMFFQMTQIMDIMEDFLRWKDMKYLRLDGSTKAEERQDMLKVFNAPDSD 888
Query: 691 QFVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATAD 748
F FLLSTR+GGLG+NL TADTVII+D+DWNPH D+QA RAHRIGQ+N + + L T D
Sbjct: 889 YFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITND 948
Query: 749 TVIIYDSDWNPHNDIQAFSRAH-RIGQQNKVM-IYRFVTRNSVEERVTQVAKRKMMLTHL 806
+V ++ RAH ++ KV+ +F +++ EE Q A K +L
Sbjct: 949 SV----------EEV-ILERAHQKLDIDGKVIQAGKFDNKSTAEE---QEAFLKRLL-EA 993
Query: 807 VVRPGMGGKQANFTKQELDDIL-RFGTXXXXXXXXXXXXXXXII--KQEAENQD--PAYW 861
+ + EL++IL R + K +D PA +
Sbjct: 994 DANGADNEENDSLDDDELNEILARSEEEKVLFASMDEERKSEKVPYKSRLIEKDELPAVF 1053
Query: 862 VKLLRHHYEQHQEDVSRTLGKGKRVR 887
+ + HH+E+ ++++S+ K KRVR
Sbjct: 1054 TEDISHHFEKKEKELSKMRDK-KRVR 1078
Score = 39 (18.8 bits), Expect = 2.8e-24, Sum P(2) = 2.8e-24
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 498 ELSPMQKKYYKYI-----LTRNFEALNPKGGGQ 525
EL+ + KYYK + L + FE K G+
Sbjct: 46 ELNELLSKYYKLLFDSNKLKKEFEKSEDKSEGK 78
>FB|FBgn0011604 [details] [associations]
symbol:Iswi "Imitation SWI" species:7227 "Drosophila
melanogaster" [GO:0006338 "chromatin remodeling"
evidence=ISS;NAS;TAS] [GO:0016589 "NURF complex"
evidence=NAS;IDA;TAS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IGI;IDA] [GO:0000166 "nucleotide binding"
evidence=TAS] [GO:0016584 "nucleosome positioning" evidence=IDA]
[GO:0006334 "nucleosome assembly" evidence=IDA] [GO:0016590 "ACF
complex" evidence=NAS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0008623 "CHRAC"
evidence=NAS;IDA;TAS] [GO:0006333 "chromatin assembly or
disassembly" evidence=IDA;TAS] [GO:0042766 "nucleosome
mobilization" evidence=IDA;TAS] [GO:0016887 "ATPase activity"
evidence=NAS] [GO:0035060 "brahma complex" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0006351 "transcription,
DNA-dependent" evidence=IDA] [GO:0005667 "transcription factor
complex" evidence=IPI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035076 "ecdysone
receptor-mediated signaling pathway" evidence=IGI] [GO:0007517
"muscle organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0042752 "regulation of circadian
rhythm" evidence=IMP] [GO:0006325 "chromatin organization"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0031213 "RSF complex"
evidence=IPI] [GO:0005700 "polytene chromosome" evidence=IDA]
[GO:0070615 "nucleosome-dependent ATPase activity" evidence=IDA]
[GO:0035063 "nuclear speck organization" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 EMBL:AE013599 GO:GO:0005524
GO:GO:0045892 GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
GO:GO:0042752 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0048813 GO:GO:0007517 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0005700 GO:GO:0035076 GO:GO:0042766 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0016590 GO:GO:0008623 GO:GO:0008094
ChiTaRS:SMARCA1 GeneTree:ENSGT00680000100002 KO:K11654
SUPFAM:SSF101224 EMBL:L27127 EMBL:AY094908 EMBL:BT044562 PIR:A56533
RefSeq:NP_523719.1 RefSeq:NP_725203.1 RefSeq:NP_725204.1
UniGene:Dm.2581 PDB:1OFC PDBsum:1OFC ProteinModelPortal:Q24368
SMR:Q24368 DIP:DIP-24067N IntAct:Q24368 MINT:MINT-252539
STRING:Q24368 PaxDb:Q24368 PRIDE:Q24368 EnsemblMetazoa:FBtr0087841
EnsemblMetazoa:FBtr0087842 EnsemblMetazoa:FBtr0087843 GeneID:36390
KEGG:dme:Dmel_CG8625 CTD:36390 FlyBase:FBgn0011604
InParanoid:Q24368 OMA:EDYCHWR OrthoDB:EOG4M0CGK PhylomeDB:Q24368
EvolutionaryTrace:Q24368 GenomeRNAi:36390 NextBio:798287
Bgee:Q24368 GermOnline:CG8625 GO:GO:0031213 GO:GO:0070615
GO:GO:0035063 Uniprot:Q24368
Length = 1027
Score = 481 (174.4 bits), Expect = 1.9e-69, Sum P(2) = 1.9e-69
Identities = 112/324 (34%), Positives = 170/324 (52%)
Query: 234 KYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFK 293
+++ P ++ +G ++ YQ+ G+NW+ + I+ ILADEMGLGKT+QTI+ L L
Sbjct: 115 RFDASPAYIK-SG-EMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKH 172
Query: 294 EGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRG 353
+ GP +V P ST+ NW EF+ W P V +GD+D R + D G
Sbjct: 173 FKNQAGPHIVIVPKSTLQNWVNEFKKWCPSLRAVCLIGDQDTR------NTFIRDVLMPG 226
Query: 354 GKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGY 413
++ V +TSYE+ + ++ W LV+DEAHR+K+ +SK + L +
Sbjct: 227 -----------EWDVCVTSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILREF 275
Query: 414 SIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFAD---ISKEEQVKRLHDL 470
N+LL+TGTP P+ FN F F + + + RLH +
Sbjct: 276 KTANRLLITGTPLQNNLHELWALLNFLLPDVFNSSEDFDEWFNTNTCLGDDALITRLHAV 335
Query: 471 LGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLL 530
L P +LRRLKA+V K + K E + V LS MQ+ +Y +L ++ + +N G +++ L
Sbjct: 336 LKPFLLRRLKAEVEKRLKPKKEMKIFVGLSKMQRDWYTKVLLKDIDVVNGAGKVEKMRLQ 395
Query: 531 NIMMDLKKCCNHPYLFPAAAEEAP 554
NI+M L+KC NHPYLF A E P
Sbjct: 396 NILMQLRKCTNHPYLFDGA-EPGP 418
Score = 319 (117.4 bits), Expect = 9.4e-44, Sum P(2) = 9.4e-44
Identities = 90/308 (29%), Positives = 138/308 (44%)
Query: 365 KFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGT 424
++ V +TSYE+ + ++ W LV+DEAHR+K+ +SK + L + N+LL+TGT
Sbjct: 227 EWDVCVTSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILREFKTANRLLITGT 286
Query: 425 PXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFAD---ISKEEQVKRLHDLLGPHMLRRLKA 481
P P+ FN F F + + + RLH +L P +LRRLKA
Sbjct: 287 PLQNNLHELWALLNFLLPDVFNSSEDFDEWFNTNTCLGDDALITRLHAVLKPFLLRRLKA 346
Query: 482 DVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCN 541
+V K + K E + V LS MQ+ +Y +L ++ + +N G +++ L NI+M L+KC N
Sbjct: 347 EVEKRLKPKKEMKIFVGLSKMQRDWYTKVLLKDIDVVNGAGKVEKMRLQNILMQLRKCTN 406
Query: 542 HPYLFPAAAEEAPVQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHRYGIKPEWLIANRV 601
HPYLF A P + L +G E G R I + R+
Sbjct: 407 HPYLFDGAEPGPPYTTDTH----LVYNSGKMAILDKLLPKLQEQGSRVLIFSQM---TRM 459
Query: 602 INSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDYLDGE 661
++ L D Y WR+ Y + + +ED + N K L +L G
Sbjct: 460 LD--ILED----YC-HWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAGGL 512
Query: 662 GYKYERID 669
G D
Sbjct: 513 GINLATAD 520
Score = 306 (112.8 bits), Expect = 1.9e-69, Sum P(2) = 1.9e-69
Identities = 65/122 (53%), Positives = 78/122 (63%)
Query: 635 IPGLKES----IEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGAS 690
+P L+E + F MT+MLDILEDY Y Y R+DG R I FN ++
Sbjct: 440 LPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSA 499
Query: 691 QFVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ--QNKYINLATAD 748
+F+F+LSTR+GGLGINLATAD VIIYDSDWNP D+QA RAHRIGQ Q + L T
Sbjct: 500 KFLFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITES 559
Query: 749 TV 750
TV
Sbjct: 560 TV 561
Score = 233 (87.1 bits), Expect = 9.4e-62, Sum P(2) = 9.4e-62
Identities = 44/92 (47%), Positives = 65/92 (70%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATAD VIIYDSDWNP D+QA RAHRIGQ+ +V ++R +T ++VEE++ + A+ K+
Sbjct: 514 INLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKL 573
Query: 802 MLTHLVVRPG--MGGKQANFTKQELDDILRFG 831
L +V++ G + + K E+ +I+RFG
Sbjct: 574 RLDKMVIQGGRLVDNRSNQLNKDEMLNIIRFG 605
>TAIR|locus:2150270 [details] [associations]
symbol:CHR23 "chromatin remodeling 23" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0007062
"sister chromatid cohesion" evidence=RCA] [GO:0007126 "meiosis"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0016571 "histone
methylation" evidence=RCA] [GO:0016579 "protein deubiquitination"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K11647
OMA:WAPSISA IPI:IPI00536400 RefSeq:NP_197432.2 UniGene:At.43995
ProteinModelPortal:F4K128 SMR:F4K128 PRIDE:F4K128
EnsemblPlants:AT5G19310.1 GeneID:832051 KEGG:ath:AT5G19310
PhylomeDB:F4K128 Uniprot:F4K128
Length = 1064
Score = 348 (127.6 bits), Expect = 2.7e-69, Sum P(4) = 2.7e-69
Identities = 79/205 (38%), Positives = 116/205 (56%)
Query: 358 RIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFL-SGYSIQ 416
R R + KF+VL+T Y+LI D A L I+W ++VDE HRLK+++ K L +GY I+
Sbjct: 477 RARIAGGKFNVLITHYDLIMRDKAFLKKIDWNYMIVDEGHRLKNHECALAKTLGTGYRIK 536
Query: 417 NKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEF---------ADISKEEQ---V 464
+LLLTGTP P FN + +F+ F A ++ EE+ +
Sbjct: 537 RRLLLTGTPIQNSLQELWSLLNFLLPHIFNSIHNFEEWFNTPFAECGSASLTDEEELLII 596
Query: 465 KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGG 524
RLH ++ P +LRR K++V K +P K++ I++ ++S QK YYK + L+ G G
Sbjct: 597 NRLHHVIRPFLLRRKKSEVEKFLPGKTQVILKCDMSAWQKLYYKQVTDVGRVGLH-SGNG 655
Query: 525 QQVSLLNIMMDLKKCCNHPYLFPAA 549
+ SL N+ M L+KCCNHPYLF A
Sbjct: 656 KSKSLQNLTMQLRKCCNHPYLFVGA 680
Score = 273 (101.2 bits), Expect = 2.7e-69, Sum P(4) = 2.7e-69
Identities = 55/110 (50%), Positives = 75/110 (68%)
Query: 635 IPGLKES----IEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGAS 690
+P LK++ + F MT+++D+LE YL Y Y R+DG+ R + +FN P +
Sbjct: 704 LPKLKKAGHRILLFSQMTRLIDLLEIYLSLNDYMYLRLDGSTKTDQRGILLKQFNEPDSP 763
Query: 691 QFVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
F+FLLSTR+GGLG+NL TADT+II+DSDWNP D QA RAHRIGQ+ +
Sbjct: 764 YFMFLLSTRAGGLGLNLQTADTIIIFDSDWNPQMDQQAEDRAHRIGQKKE 813
Score = 230 (86.0 bits), Expect = 2.7e-69, Sum P(4) = 2.7e-69
Identities = 47/110 (42%), Positives = 64/110 (58%)
Query: 231 LRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYS 290
+++K KQP L G +L +YQLEG+ W+ + + + ILADEMGLGKTIQTI +
Sbjct: 370 IQEKVTKQPSLLQ--GGELRSYQLEGLQWMVSLYNNDYNGILADEMGLGKTIQTIALIAY 427
Query: 291 LFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLR 340
L + GP L+ AP + + NWE EF WAP Y G K+ R +R
Sbjct: 428 LLESKDLHGPHLILAPKAVLPNWENEFALWAPSISAFLYDGSKEKRTEIR 477
Score = 195 (73.7 bits), Expect = 5.7e-62, Sum P(3) = 5.7e-62
Identities = 55/180 (30%), Positives = 87/180 (48%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL TADT+II+DSDWNP D QA RAHRIGQ+ +V ++ V+ S+EE + + AK+KM
Sbjct: 778 LNLQTADTIIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSIGSIEEVILERAKQKM 837
Query: 802 MLTHLVVRPGMGG--KQANFTKQELDDILRFGTXXXXXXXXXXXXXXXIIKQEAENQDPA 859
+ V++ G+ A ++ L++I+ GT I + A +
Sbjct: 838 GIDAKVIQAGLFNTTSTAQDRREMLEEIMSKGTSSLGEDVPSERE----INRLAARTEEE 893
Query: 860 YWVKLLRHHYEQHQEDVSRTLGKGKRVRK--QTXXXXXXXXXXXXXXXXLTGRRSAKKKE 917
+W+ + +E+ L + K V + T LTG+R K+KE
Sbjct: 894 FWMFEQMDEERRKKENYKTRLMEEKEVPEWAYTSETQEDKTNAKNHFGSLTGKR--KRKE 951
Score = 47 (21.6 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 7/23 (30%), Positives = 16/23 (69%)
Query: 867 HHYEQHQEDVSRTLGKGKRVRKQ 889
H + H+ +++TLG G R++++
Sbjct: 516 HRLKNHECALAKTLGTGYRIKRR 538
Score = 40 (19.1 bits), Expect = 1.5e-17, Sum P(3) = 1.5e-17
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 469 DLLGPHMLRRLKADVLKNMPSKSEF 493
DL GPH++ KA VL N ++EF
Sbjct: 433 DLHGPHLILAPKA-VLPNW--ENEF 454
Score = 37 (18.1 bits), Expect = 2.7e-69, Sum P(4) = 2.7e-69
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 861 WVKLLRHHYEQHQEDVSRTLGKGKRVRKQT 890
W+K + E ED S+ K KR +T
Sbjct: 963 WMKAM----ESEDEDASKVSQKRKRTDTKT 988
>GENEDB_PFALCIPARUM|PF11_0053 [details] [associations]
symbol:PF11_0053 "PfSNF2L" species:5833
"Plasmodium falciparum" [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0008026
EMBL:AE014186 GO:GO:0008094 KO:K01509 RefSeq:XP_001347729.1
ProteinModelPortal:Q8IIW0 IntAct:Q8IIW0 MINT:MINT-1585538
EnsemblProtists:PF11_0053:mRNA GeneID:810605 KEGG:pfa:PF11_0053
EuPathDB:PlasmoDB:PF3D7_1104200 HOGENOM:HOG000282197
ProtClustDB:CLSZ2444952 Uniprot:Q8IIW0
Length = 1426
Score = 490 (177.5 bits), Expect = 2.7e-69, Sum P(2) = 2.7e-69
Identities = 126/335 (37%), Positives = 177/335 (52%)
Query: 237 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 296
KQP ++ T + YQLEG+NWL + I+ ILADEMGLGKT+QTI+ L L +
Sbjct: 313 KQPMNINGT---MKPYQLEGLNWLYQLYRFKINGILADEMGLGKTLQTISLLCYLRFNKN 369
Query: 297 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKP 356
K ++ P ST+ NW E + W Y G+KD R L NR
Sbjct: 370 IKKKSIIICPRSTLDNWYEEIKKWCTPMKAFKYYGNKDQRKEL-----------NRN--- 415
Query: 357 CRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQ 416
+ S F VLLT+YE++ D + L I+W LV+DEAHR+K+ +S + +
Sbjct: 416 -LLHSD---FDVLLTTYEIVIKDKSALYDIDWFFLVIDEAHRIKNEKSVLSSSVRFLRSE 471
Query: 417 NKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISK--------EEQVKRLH 468
N+LL+TGTP P+ F++ F F +ISK E + +LH
Sbjct: 472 NRLLITGTPLHNNLKELWSLLNFLMPKIFDNSEEFDNLF-NISKISTNDNKQSEIITQLH 530
Query: 469 DLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVS 528
+L P MLRRLK +V +++P K E + V +S +QKK Y IL++N + LN G +
Sbjct: 531 TILKPFMLRRLKVEVEQSLPPKREIYIFVGMSKLQKKLYSDILSKNIDVLNAMTGSKN-Q 589
Query: 529 LLNIMMDLKKCCNHPYLFPAAAEEAPVQGGQYEIQ 563
+LNI+M L+KCCNHPYLF EE P G + I+
Sbjct: 590 MLNILMQLRKCCNHPYLFDGI-EEPPYIEGNHLIE 623
Score = 301 (111.0 bits), Expect = 2.7e-69, Sum P(2) = 2.7e-69
Identities = 59/112 (52%), Positives = 79/112 (70%)
Query: 635 IPGLKES----IEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGAS 690
+P LK+ + F MT++LDI++DY + Y Y RIDG+ G RQ I++FN P +
Sbjct: 635 LPRLKKENSRVLLFSQMTRLLDIIDDYCRWKNYPYLRIDGSTPGDERQVRINQFNEPNSK 694
Query: 691 QFVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYI 742
F+FLLSTR+GG+GINL TAD VI++DSD+NP DIQA RAHRIGQ+ + I
Sbjct: 695 YFIFLLSTRAGGIGINLTTADIVILFDSDYNPQMDIQAMDRAHRIGQKKRVI 746
Score = 251 (93.4 bits), Expect = 5.0e-64, Sum P(2) = 5.0e-64
Identities = 50/93 (53%), Positives = 68/93 (73%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INL TAD VI++DSD+NP DIQA RAHRIGQ+ +V++YRFVT+NSVEE++ + A +K+
Sbjct: 709 INLTTADIVILFDSDYNPQMDIQAMDRAHRIGQKKRVIVYRFVTQNSVEEKIVERAAKKL 768
Query: 802 MLTHLVVRPG---MGGKQANFTKQELDDILRFG 831
L L+++ G + + N KQEL DIL FG
Sbjct: 769 KLDSLIIQKGKLNLNSAKEN-NKQELHDILNFG 800
Score = 40 (19.1 bits), Expect = 7.9e-42, Sum P(2) = 7.9e-42
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNI 672
F N K ++ ++ YL KY++I G +
Sbjct: 1239 FSNSKKSMEDIKAYLTVFFRKYDQIKGGV 1267
Score = 40 (19.1 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 525 QQVSLLNIMMDLKKCCNHPYL 545
Q LL+I+ D + N+PYL
Sbjct: 650 QMTRLLDIIDDYCRWKNYPYL 670
Score = 37 (18.1 bits), Expect = 7.9e-21, Sum P(2) = 7.9e-21
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 151 LRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEF 188
++D S +Y + W L D+A + + L S+ F
Sbjct: 432 IKDKSALYDIDWFFLVIDEAHRIKNEKSV--LSSSVRF 467
Score = 37 (18.1 bits), Expect = 7.9e-21, Sum P(2) = 7.9e-21
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 607 LRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEF 644
++D S +Y + W L D+A + + L S+ F
Sbjct: 432 IKDKSALYDIDWFFLVIDEAHRIKNEKSV--LSSSVRF 467
>UNIPROTKB|Q8IIW0 [details] [associations]
symbol:PF11_0053 "PfSNF2L" species:36329 "Plasmodium
falciparum 3D7" [GO:0006338 "chromatin remodeling" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0008026
EMBL:AE014186 GO:GO:0008094 KO:K01509 RefSeq:XP_001347729.1
ProteinModelPortal:Q8IIW0 IntAct:Q8IIW0 MINT:MINT-1585538
EnsemblProtists:PF11_0053:mRNA GeneID:810605 KEGG:pfa:PF11_0053
EuPathDB:PlasmoDB:PF3D7_1104200 HOGENOM:HOG000282197
ProtClustDB:CLSZ2444952 Uniprot:Q8IIW0
Length = 1426
Score = 490 (177.5 bits), Expect = 2.7e-69, Sum P(2) = 2.7e-69
Identities = 126/335 (37%), Positives = 177/335 (52%)
Query: 237 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 296
KQP ++ T + YQLEG+NWL + I+ ILADEMGLGKT+QTI+ L L +
Sbjct: 313 KQPMNINGT---MKPYQLEGLNWLYQLYRFKINGILADEMGLGKTLQTISLLCYLRFNKN 369
Query: 297 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKP 356
K ++ P ST+ NW E + W Y G+KD R L NR
Sbjct: 370 IKKKSIIICPRSTLDNWYEEIKKWCTPMKAFKYYGNKDQRKEL-----------NRN--- 415
Query: 357 CRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQ 416
+ S F VLLT+YE++ D + L I+W LV+DEAHR+K+ +S + +
Sbjct: 416 -LLHSD---FDVLLTTYEIVIKDKSALYDIDWFFLVIDEAHRIKNEKSVLSSSVRFLRSE 471
Query: 417 NKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISK--------EEQVKRLH 468
N+LL+TGTP P+ F++ F F +ISK E + +LH
Sbjct: 472 NRLLITGTPLHNNLKELWSLLNFLMPKIFDNSEEFDNLF-NISKISTNDNKQSEIITQLH 530
Query: 469 DLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVS 528
+L P MLRRLK +V +++P K E + V +S +QKK Y IL++N + LN G +
Sbjct: 531 TILKPFMLRRLKVEVEQSLPPKREIYIFVGMSKLQKKLYSDILSKNIDVLNAMTGSKN-Q 589
Query: 529 LLNIMMDLKKCCNHPYLFPAAAEEAPVQGGQYEIQ 563
+LNI+M L+KCCNHPYLF EE P G + I+
Sbjct: 590 MLNILMQLRKCCNHPYLFDGI-EEPPYIEGNHLIE 623
Score = 301 (111.0 bits), Expect = 2.7e-69, Sum P(2) = 2.7e-69
Identities = 59/112 (52%), Positives = 79/112 (70%)
Query: 635 IPGLKES----IEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGAS 690
+P LK+ + F MT++LDI++DY + Y Y RIDG+ G RQ I++FN P +
Sbjct: 635 LPRLKKENSRVLLFSQMTRLLDIIDDYCRWKNYPYLRIDGSTPGDERQVRINQFNEPNSK 694
Query: 691 QFVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYI 742
F+FLLSTR+GG+GINL TAD VI++DSD+NP DIQA RAHRIGQ+ + I
Sbjct: 695 YFIFLLSTRAGGIGINLTTADIVILFDSDYNPQMDIQAMDRAHRIGQKKRVI 746
Score = 251 (93.4 bits), Expect = 5.0e-64, Sum P(2) = 5.0e-64
Identities = 50/93 (53%), Positives = 68/93 (73%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INL TAD VI++DSD+NP DIQA RAHRIGQ+ +V++YRFVT+NSVEE++ + A +K+
Sbjct: 709 INLTTADIVILFDSDYNPQMDIQAMDRAHRIGQKKRVIVYRFVTQNSVEEKIVERAAKKL 768
Query: 802 MLTHLVVRPG---MGGKQANFTKQELDDILRFG 831
L L+++ G + + N KQEL DIL FG
Sbjct: 769 KLDSLIIQKGKLNLNSAKEN-NKQELHDILNFG 800
Score = 40 (19.1 bits), Expect = 7.9e-42, Sum P(2) = 7.9e-42
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNI 672
F N K ++ ++ YL KY++I G +
Sbjct: 1239 FSNSKKSMEDIKAYLTVFFRKYDQIKGGV 1267
Score = 40 (19.1 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 525 QQVSLLNIMMDLKKCCNHPYL 545
Q LL+I+ D + N+PYL
Sbjct: 650 QMTRLLDIIDDYCRWKNYPYL 670
Score = 37 (18.1 bits), Expect = 7.9e-21, Sum P(2) = 7.9e-21
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 151 LRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEF 188
++D S +Y + W L D+A + + L S+ F
Sbjct: 432 IKDKSALYDIDWFFLVIDEAHRIKNEKSV--LSSSVRF 467
Score = 37 (18.1 bits), Expect = 7.9e-21, Sum P(2) = 7.9e-21
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 607 LRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEF 644
++D S +Y + W L D+A + + L S+ F
Sbjct: 432 IKDKSALYDIDWFFLVIDEAHRIKNEKSV--LSSSVRF 467
>POMBASE|SPBP35G2.10 [details] [associations]
symbol:mit1 "SHREC complex subunit Mit1" species:4896
"Schizosaccharomyces pombe" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000183 "chromatin silencing at rDNA" evidence=IMP] [GO:0000790
"nuclear chromatin" evidence=IC] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005721 "centromeric
heterochromatin" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0006342 "chromatin silencing" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IMP] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0019787 "small conjugating protein
ligase activity" evidence=ISM] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0031933 "telomeric
heterochromatin" evidence=IDA] [GO:0031934 "mating-type region
heterochromatin" evidence=IDA] [GO:0033553 "rDNA heterochromatin"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0070824 "SHREC complex" evidence=IDA] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00490 PomBase:SPBP35G2.10 Prosite:PS00518 GO:GO:0005524
GO:GO:0044732 GO:GO:0046872 GO:GO:0003677 EMBL:CU329671
GO:GO:0008270 GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0030466
GO:GO:0000122 GO:GO:0000790 GO:GO:0030702 GO:GO:0000183
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
GO:GO:0005721 GO:GO:0031934 InterPro:IPR016197 SUPFAM:SSF54160
HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016584 GO:GO:0019787 GO:GO:0033553
GO:GO:0016581 GO:GO:0031933 RefSeq:NP_595385.1
ProteinModelPortal:Q9P793 STRING:Q9P793 EnsemblFungi:SPBP35G2.10.1
GeneID:2541336 KEGG:spo:SPBP35G2.10 OrthoDB:EOG4GQTD1
NextBio:20802445 Uniprot:Q9P793
Length = 1418
Score = 512 (185.3 bits), Expect = 9.4e-69, Sum P(3) = 9.4e-69
Identities = 130/336 (38%), Positives = 183/336 (54%)
Query: 227 PTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTIT 286
P T+L ++ QP F+ G L YQL+G+NWL W + ILADEMGLGKT+Q I+
Sbjct: 538 PFTNL--EWHSQPSFIK--GGTLMPYQLKGLNWLYLRWYTHHPCILADEMGLGKTVQVIS 593
Query: 287 FLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHD-IS 345
F+ LF C P LV P +T+ NWERE + WAP + VG + R ++RD+ I+
Sbjct: 594 FISVLFYRHKCF-PVLVIVPHATVANWERELKKWAPFLQINVLVGSEKNRSLVRDYRLIN 652
Query: 346 WEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSK 405
+D P + ST HVL+ S + +++LL +W VL+VDE RLK++QS
Sbjct: 653 QKD-------PKHV--ST---HVLVISASNVEREISLLRKFQWKVLIVDEGQRLKNDQSS 700
Query: 406 FFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVK 465
F +LS KLLLTGTP P K N + ++ I E+ V
Sbjct: 701 LFYYLSSVKSDFKLLLTGTPLQNNVRELFNLLQFLNPMKIN-AAELEKRYSIIDTEK-VT 758
Query: 466 RLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEAL-NPKG-- 522
LH +L P LRR+K++VL N P+K E I+ + ++P+QK YK IL++N L N G
Sbjct: 759 ELHQILKPFFLRRVKSEVLDNFPTKVEVIIPLSMTPVQKGLYKSILSKNLSLLRNITGYA 818
Query: 523 -----GGQQV-SLLNIMMDLKKCCNHPYLFPAAAEE 552
GGQ+ SL NI+M L+K HPY++ E+
Sbjct: 819 NTSSSGGQRTTSLNNILMQLRKTLAHPYIYSPDIED 854
Score = 274 (101.5 bits), Expect = 9.4e-69, Sum P(3) = 9.4e-69
Identities = 57/109 (52%), Positives = 73/109 (66%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F + LDILED+ + + Y R DG + RQ +ID FNAP + FLLSTR+GG+
Sbjct: 893 FSQFIQQLDILEDWFEYKNIAYARFDGASSEMERQSAIDSFNAPNSELSCFLLSTRAGGV 952
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYIN--LATADTV 750
GINLA+ADTVII D D+NPH D+QA +RAHR GQ+ K + L T D+V
Sbjct: 953 GINLASADTVIILDPDFNPHQDMQAIARAHRYGQKKKVLVFVLTTRDSV 1001
Score = 236 (88.1 bits), Expect = 9.0e-65, Sum P(3) = 9.0e-65
Identities = 51/115 (44%), Positives = 78/115 (67%)
Query: 717 DSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN 776
DS P++++ F + R G INLA+ADTVII D D+NPH D+QA +RAHR GQ+
Sbjct: 931 DSFNAPNSELSCFLLSTRAGGVG--INLASADTVIILDPDFNPHQDMQAIARAHRYGQKK 988
Query: 777 KVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQANFTKQELDDILRFG 831
KV+++ TR+SVEE++ Q A++K++L HL+V Q + ++++L+ ILR G
Sbjct: 989 KVLVFVLTTRDSVEEKIIQNAQKKLVLDHLIVE---SLDQNHNSEKDLESILRHG 1040
Score = 45 (20.9 bits), Expect = 9.4e-69, Sum P(3) = 9.4e-69
Identities = 8/18 (44%), Positives = 9/18 (50%)
Query: 156 TIYLVKWRDLPYDKATWE 173
T V WR L Y + WE
Sbjct: 481 TFAFVSWRGLTYYMSNWE 498
Score = 45 (20.9 bits), Expect = 9.2e-19, Sum P(2) = 9.2e-19
Identities = 8/18 (44%), Positives = 9/18 (50%)
Query: 612 TIYLVKWRDLPYDKATWE 629
T V WR L Y + WE
Sbjct: 481 TFAFVSWRGLTYYMSNWE 498
Score = 41 (19.5 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 116 LNRHNINDEELEKKY 130
LN IN ELEK+Y
Sbjct: 735 LNPMKINAAELEKRY 749
>UNIPROTKB|K7GMM0 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
GeneID:100188905 RefSeq:XP_003360491.1 Ensembl:ENSSSCT00000034062
Uniprot:K7GMM0
Length = 1057
Score = 549 (198.3 bits), Expect = 1.2e-68, Sum P(2) = 1.2e-68
Identities = 143/435 (32%), Positives = 218/435 (50%)
Query: 226 KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTI 285
+ T+++ ++E P ++ G L YQ+ G+NWL + ++ ILADEMGLGKT+QTI
Sbjct: 165 RKTSNVCVRFEVSPSYVK--GGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTI 222
Query: 286 TFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRDHDI 344
L L + GP +V P ST+ NW EF+ W P V+ +VGDKD R +RD +
Sbjct: 223 ALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMM 282
Query: 345 SWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQS 404
E + V +TSYE++ + ++ W LV+DEAHR+K+ +S
Sbjct: 283 PGE------------------WDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKS 324
Query: 405 KFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFAD---ISKE 461
K + + + N+LLLTGTP P+ FN F + F + +
Sbjct: 325 KLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQ 384
Query: 462 EQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPK 521
+ V+RLH +L P +LRR+K DV K++P K E + + LS MQ+++Y IL ++ + LN
Sbjct: 385 KLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSA 444
Query: 522 GGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGXXXXXXXXXXX 581
G ++ LLNI+M L+KCCNHPYLF A P ++ + +G
Sbjct: 445 GKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEH----IVSNSGKMVVLDKLLAK 500
Query: 582 XXEDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPY---DKATWEDENED---- 634
E G R I + R+++ L D Y + WR Y D T +E ED
Sbjct: 501 LKEQGSRVLIFSQM---TRLLD--ILED----YCM-WRGYEYCRLDGQTPHEEREDKFLE 550
Query: 635 --IPGLKESIEFYNM 647
+ G +E+IE +N+
Sbjct: 551 VELLGQREAIEAFNV 565
Score = 293 (108.2 bits), Expect = 6.5e-22, P = 6.5e-22
Identities = 68/153 (44%), Positives = 91/153 (59%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQ------------ESIDRFNAPGASQ 691
F MT++LDILEDY GY+Y R+DG R+ E+I+ FN P +S+
Sbjct: 511 FSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVELLGQREAIEAFNVPNSSR 570
Query: 692 FVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADT 749
F+F+LSTR+GGLGINLA+AD VI+YDSDWNP D+QA RAHRIGQ+ + L T +T
Sbjct: 571 FIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNT 630
Query: 750 V---IIYDSDWNPHNDIQAFSRAHRIGQQNKVM 779
V I+ ++ D + I QQ+ M
Sbjct: 631 VEERIVERAEIKLRLDSIVIQQGRLIDQQSNKM 663
Score = 225 (84.3 bits), Expect = 1.2e-68, Sum P(2) = 1.2e-68
Identities = 44/92 (47%), Positives = 66/92 (71%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLA+AD VI+YDSDWNP D+QA RAHRIGQ+ V ++R +T N+VEER+ + A+ K+
Sbjct: 584 INLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKL 643
Query: 802 MLTHLVVRPG-MGGKQAN-FTKQELDDILRFG 831
L +V++ G + +Q+N K+E+ ++R G
Sbjct: 644 RLDSIVIQQGRLIDQQSNKMAKEEMLQMIRHG 675
>UNIPROTKB|K7GLQ2 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
RefSeq:XP_003135410.1 Ensembl:ENSSSCT00000033549 GeneID:100188905
Uniprot:K7GLQ2
Length = 1073
Score = 549 (198.3 bits), Expect = 1.3e-68, Sum P(2) = 1.3e-68
Identities = 143/435 (32%), Positives = 218/435 (50%)
Query: 226 KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTI 285
+ T+++ ++E P ++ G L YQ+ G+NWL + ++ ILADEMGLGKT+QTI
Sbjct: 165 RKTSNVCVRFEVSPSYVK--GGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTI 222
Query: 286 TFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRDHDI 344
L L + GP +V P ST+ NW EF+ W P V+ +VGDKD R +RD +
Sbjct: 223 ALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMM 282
Query: 345 SWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQS 404
E + V +TSYE++ + ++ W LV+DEAHR+K+ +S
Sbjct: 283 PGE------------------WDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKS 324
Query: 405 KFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFAD---ISKE 461
K + + + N+LLLTGTP P+ FN F + F + +
Sbjct: 325 KLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQ 384
Query: 462 EQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPK 521
+ V+RLH +L P +LRR+K DV K++P K E + + LS MQ+++Y IL ++ + LN
Sbjct: 385 KLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSA 444
Query: 522 GGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGXXXXXXXXXXX 581
G ++ LLNI+M L+KCCNHPYLF A P ++ + +G
Sbjct: 445 GKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEH----IVSNSGKMVVLDKLLAK 500
Query: 582 XXEDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPY---DKATWEDENED---- 634
E G R I + R+++ L D Y + WR Y D T +E ED
Sbjct: 501 LKEQGSRVLIFSQM---TRLLD--ILED----YCM-WRGYEYCRLDGQTPHEEREDKFLE 550
Query: 635 --IPGLKESIEFYNM 647
+ G +E+IE +N+
Sbjct: 551 VELLGQREAIEAFNV 565
Score = 293 (108.2 bits), Expect = 6.6e-22, P = 6.6e-22
Identities = 68/153 (44%), Positives = 91/153 (59%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQ------------ESIDRFNAPGASQ 691
F MT++LDILEDY GY+Y R+DG R+ E+I+ FN P +S+
Sbjct: 511 FSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVELLGQREAIEAFNVPNSSR 570
Query: 692 FVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADT 749
F+F+LSTR+GGLGINLA+AD VI+YDSDWNP D+QA RAHRIGQ+ + L T +T
Sbjct: 571 FIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNT 630
Query: 750 V---IIYDSDWNPHNDIQAFSRAHRIGQQNKVM 779
V I+ ++ D + I QQ+ M
Sbjct: 631 VEERIVERAEIKLRLDSIVIQQGRLIDQQSNKM 663
Score = 225 (84.3 bits), Expect = 1.3e-68, Sum P(2) = 1.3e-68
Identities = 44/92 (47%), Positives = 66/92 (71%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLA+AD VI+YDSDWNP D+QA RAHRIGQ+ V ++R +T N+VEER+ + A+ K+
Sbjct: 584 INLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKL 643
Query: 802 MLTHLVVRPG-MGGKQAN-FTKQELDDILRFG 831
L +V++ G + +Q+N K+E+ ++R G
Sbjct: 644 RLDSIVIQQGRLIDQQSNKMAKEEMLQMIRHG 675
>UNIPROTKB|F6TQG2 [details] [associations]
symbol:SMARCA1 "Probable global transcription activator
SNF2L1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 ChiTaRS:SMARCA1 SUPFAM:SSF101224
EMBL:AL138745 EMBL:AL022577 HGNC:HGNC:11097 IPI:IPI00647510
ProteinModelPortal:F6TQG2 SMR:F6TQG2 PRIDE:F6TQG2
Ensembl:ENST00000450039 ArrayExpress:F6TQG2 Bgee:F6TQG2
Uniprot:F6TQG2
Length = 1005
Score = 547 (197.6 bits), Expect = 1.5e-68, Sum P(2) = 1.5e-68
Identities = 148/460 (32%), Positives = 224/460 (48%)
Query: 226 KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTI 285
+ T+++ ++E P ++ G L YQ+ G+NWL + ++ ILADEMGLGKT+QTI
Sbjct: 141 RKTSNVCIRFEVSPSYVK--GGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTI 198
Query: 286 TFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRDHDI 344
L L + GP +V P ST+ NW EF+ W P V+ +VGDKD R +RD +
Sbjct: 199 ALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMM 258
Query: 345 SWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQS 404
E + V +TSYE++ + ++ W LV+DEAHR+K+ +S
Sbjct: 259 PGE------------------WDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKS 300
Query: 405 KFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFAD---ISKE 461
K + + + N+LLLTGTP P+ FN F + F + +
Sbjct: 301 KLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQ 360
Query: 462 EQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPK 521
+ V+RLH +L P +LRR+K DV K++P K E + + LS MQ+++Y IL ++ + LN
Sbjct: 361 KLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSS 420
Query: 522 GGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGXXXXXXXXXXX 581
G ++ LLNI+M L+KCCNHPYLF A P ++ + +G
Sbjct: 421 GKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEH----IVSNSGKMVVLDKLLAK 476
Query: 582 XXEDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPY---DKATWEDENED---- 634
E G R I + R+++ L D Y + WR Y D T +E ED
Sbjct: 477 LKEQGSRVLIFSQM---TRLLD--ILED----YCM-WRGYEYCRLDGQTPHEEREDKFLE 526
Query: 635 --IPGLKESIEFYNM---TKMLDILEDYLDGEGYKYERID 669
G +E+IE +N +K + +L G G D
Sbjct: 527 VEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINLASAD 566
Score = 296 (109.3 bits), Expect = 2.8e-22, P = 2.8e-22
Identities = 63/121 (52%), Positives = 81/121 (66%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQ------------ESIDRFNAPGASQ 691
F MT++LDILEDY GY+Y R+DG R+ E+I+ FNAP +S+
Sbjct: 487 FSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSK 546
Query: 692 FVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADT 749
F+F+LSTR+GGLGINLA+AD VI+YDSDWNP D+QA RAHRIGQ+ + L T +T
Sbjct: 547 FIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNT 606
Query: 750 V 750
V
Sbjct: 607 V 607
Score = 225 (84.3 bits), Expect = 1.5e-68, Sum P(2) = 1.5e-68
Identities = 44/92 (47%), Positives = 66/92 (71%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLA+AD VI+YDSDWNP D+QA RAHRIGQ+ V ++R +T N+VEER+ + A+ K+
Sbjct: 560 INLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKL 619
Query: 802 MLTHLVVRPG-MGGKQAN-FTKQELDDILRFG 831
L +V++ G + +Q+N K+E+ ++R G
Sbjct: 620 RLDSIVIQQGRLIDQQSNKLAKEEMLQMIRHG 651
>UNIPROTKB|P28370 [details] [associations]
symbol:SMARCA1 "Probable global transcription activator
SNF2L1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016589 "NURF complex" evidence=IDA]
[GO:0036310 "annealing helicase activity" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IDA] [GO:0070615
"nucleosome-dependent ATPase activity" evidence=IDA] [GO:0090537
"CERF complex" evidence=IDA] [GO:0030182 "neuron differentiation"
evidence=ISS] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0007420 "brain development" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IMP] [GO:0000733 "DNA strand renaturation" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044
GO:GO:0016589 GO:GO:0036310 ChiTaRS:SMARCA1 SUPFAM:SSF101224
EMBL:AL138745 EMBL:M88163 EMBL:M89907 EMBL:AL022577 EMBL:BC117447
IPI:IPI00216046 IPI:IPI00646130 PIR:S35457 PIR:S35458
RefSeq:NP_003060.2 RefSeq:NP_620604.2 UniGene:Hs.152292
ProteinModelPortal:P28370 SMR:P28370 IntAct:P28370
MINT:MINT-2802155 STRING:P28370 PhosphoSite:P28370 DMDM:115311627
PaxDb:P28370 PRIDE:P28370 Ensembl:ENST00000371121
Ensembl:ENST00000371122 Ensembl:ENST00000371123 GeneID:6594
KEGG:hsa:6594 UCSC:uc004eun.4 UCSC:uc004eup.4 CTD:6594
GeneCards:GC0XM128580 HGNC:HGNC:11097 HPA:HPA003335 MIM:300012
neXtProt:NX_P28370 PharmGKB:PA35947 HOVERGEN:HBG056329
InParanoid:P28370 KO:K11727 OMA:PMSQKRK PhylomeDB:P28370
GenomeRNAi:6594 NextBio:25645 ArrayExpress:P28370 Bgee:P28370
CleanEx:HS_SMARCA1 Genevestigator:P28370 GermOnline:ENSG00000102038
Uniprot:P28370
Length = 1054
Score = 547 (197.6 bits), Expect = 2.1e-68, Sum P(2) = 2.1e-68
Identities = 148/460 (32%), Positives = 224/460 (48%)
Query: 226 KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTI 285
+ T+++ ++E P ++ G L YQ+ G+NWL + ++ ILADEMGLGKT+QTI
Sbjct: 162 RKTSNVCIRFEVSPSYVK--GGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTI 219
Query: 286 TFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRDHDI 344
L L + GP +V P ST+ NW EF+ W P V+ +VGDKD R +RD +
Sbjct: 220 ALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMM 279
Query: 345 SWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQS 404
E + V +TSYE++ + ++ W LV+DEAHR+K+ +S
Sbjct: 280 PGE------------------WDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKS 321
Query: 405 KFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFAD---ISKE 461
K + + + N+LLLTGTP P+ FN F + F + +
Sbjct: 322 KLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQ 381
Query: 462 EQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPK 521
+ V+RLH +L P +LRR+K DV K++P K E + + LS MQ+++Y IL ++ + LN
Sbjct: 382 KLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSS 441
Query: 522 GGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGXXXXXXXXXXX 581
G ++ LLNI+M L+KCCNHPYLF A P ++ + +G
Sbjct: 442 GKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEH----IVSNSGKMVVLDKLLAK 497
Query: 582 XXEDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPY---DKATWEDENED---- 634
E G R I + R+++ L D Y + WR Y D T +E ED
Sbjct: 498 LKEQGSRVLIFSQM---TRLLD--ILED----YCM-WRGYEYCRLDGQTPHEEREDKFLE 547
Query: 635 --IPGLKESIEFYNM---TKMLDILEDYLDGEGYKYERID 669
G +E+IE +N +K + +L G G D
Sbjct: 548 VEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINLASAD 587
Score = 296 (109.3 bits), Expect = 3.1e-22, P = 3.1e-22
Identities = 63/121 (52%), Positives = 81/121 (66%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQ------------ESIDRFNAPGASQ 691
F MT++LDILEDY GY+Y R+DG R+ E+I+ FNAP +S+
Sbjct: 508 FSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSK 567
Query: 692 FVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADT 749
F+F+LSTR+GGLGINLA+AD VI+YDSDWNP D+QA RAHRIGQ+ + L T +T
Sbjct: 568 FIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNT 627
Query: 750 V 750
V
Sbjct: 628 V 628
Score = 225 (84.3 bits), Expect = 2.1e-68, Sum P(2) = 2.1e-68
Identities = 44/92 (47%), Positives = 66/92 (71%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLA+AD VI+YDSDWNP D+QA RAHRIGQ+ V ++R +T N+VEER+ + A+ K+
Sbjct: 581 INLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKL 640
Query: 802 MLTHLVVRPG-MGGKQAN-FTKQELDDILRFG 831
L +V++ G + +Q+N K+E+ ++R G
Sbjct: 641 RLDSIVIQQGRLIDQQSNKLAKEEMLQMIRHG 672
>WB|WBGene00002169 [details] [associations]
symbol:isw-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040027 "negative regulation of
vulval development" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0040026 "positive regulation of vulval development"
evidence=IGI] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00384 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0016246 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000790 GO:GO:0040035 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 GO:GO:0040027 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GO:GO:0040026 EMBL:FO081312 PIR:S44645
RefSeq:NP_498468.2 ProteinModelPortal:P41877 SMR:P41877
STRING:P41877 PaxDb:P41877 EnsemblMetazoa:F37A4.8 GeneID:175944
KEGG:cel:CELE_F37A4.8 UCSC:F37A4.8 CTD:175944 WormBase:F37A4.8
GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 InParanoid:P41877
KO:K11654 OMA:MQRKWYK NextBio:890418 SUPFAM:SSF101224
Uniprot:P41877
Length = 1009
Score = 476 (172.6 bits), Expect = 2.8e-68, Sum P(2) = 2.8e-68
Identities = 113/330 (34%), Positives = 177/330 (53%)
Query: 235 YEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKE 294
++K P ++++ G ++ YQ+ G+NWL I+ ILADEMGLGKT+QTI+ + +
Sbjct: 120 FDKSPFYIEN-G-EMRDYQVRGLNWLASLQHNKINGILADEMGLGKTLQTISMIGYMKHY 177
Query: 295 GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRI-VLRDHDISWEDTANRG 353
+ P LV P ST+ NW EF+ W P V +GD+ R VLRD +
Sbjct: 178 KNKASPHLVIVPKSTLQNWANEFKKWCPSINAVVLIGDEAARNQVLRDVIL--------- 228
Query: 354 GKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGY 413
P KF V T+YE++ L + W +++DEAHR+K+ +SK + +
Sbjct: 229 --P-------QKFDVCCTTYEMMLKVKTQLKKLNWRYIIIDEAHRIKNEKSKLSETVREL 279
Query: 414 SIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKE---EQVKRLHDL 470
+ +N+LL+TGTP P+ F F + F++ + + V+RLH +
Sbjct: 280 NSENRLLITGTPLQNNLHELWALLNFLLPDIFTSSDDFDSWFSNDAMSGNTDLVQRLHKV 339
Query: 471 LGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLL 530
L P +LRR+K+DV K++ K E V V LS MQ+++Y +L ++ + +N G ++ L+
Sbjct: 340 LQPFLLRRIKSDVEKSLLPKKEVKVYVGLSKMQREWYTKVLMKDIDIINGAGKVEKARLM 399
Query: 531 NIMMDLKKCCNHPYLFPAAAEEAPVQGGQY 560
NI+M L+KC NHPYLF A P Q+
Sbjct: 400 NILMHLRKCVNHPYLFDGAEPGPPFTTDQH 429
Score = 300 (110.7 bits), Expect = 2.8e-68, Sum P(2) = 2.8e-68
Identities = 58/109 (53%), Positives = 78/109 (71%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F ++MLD+LED+ Y+Y R+DG+ R +I+ +NAP + +F+F+L+TR+GGL
Sbjct: 457 FSQFSRMLDLLEDFCWWRHYEYCRLDGSTPHEDRSNAIEAYNAPDSKKFIFMLTTRAGGL 516
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ--QNKYINLATADTV 750
GINLATAD VIIYDSDWNP +D+QA RAHRIGQ Q + L T +TV
Sbjct: 517 GINLATADVVIIYDSDWNPQSDLQAMDRAHRIGQKKQVRVFRLITENTV 565
Score = 237 (88.5 bits), Expect = 1.2e-61, Sum P(2) = 1.2e-61
Identities = 44/91 (48%), Positives = 65/91 (71%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLATAD VIIYDSDWNP +D+QA RAHRIGQ+ +V ++R +T N+V+ER+ + A+ K+
Sbjct: 518 INLATADVVIIYDSDWNPQSDLQAMDRAHRIGQKKQVRVFRLITENTVDERIIEKAEAKL 577
Query: 802 MLTHLVVRPG-MGGKQANFTKQELDDILRFG 831
L ++V++ G M Q K ++ ++R G
Sbjct: 578 RLDNIVIQQGRMSEAQKTLGKGDMISMIRHG 608
>GENEDB_PFALCIPARUM|PFB0730w [details] [associations]
symbol:PFB0730w "DNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0016514 "SWI/SNF complex" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0006338 GO:GO:0016514 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 KO:K11647 EMBL:AE001362 OMA:NENMNMS
PIR:F71607 RefSeq:XP_001349665.1 ProteinModelPortal:O96239
EnsemblProtists:PFB0730w:mRNA GeneID:812747 KEGG:pfa:PFB0730w
EuPathDB:PlasmoDB:PF3D7_0216000 Uniprot:O96239
Length = 1997
Score = 496 (179.7 bits), Expect = 3.8e-67, Sum P(4) = 3.8e-67
Identities = 125/330 (37%), Positives = 176/330 (53%)
Query: 233 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 292
K+ KQP L G +L YQLEG+ WL + N+ ILADEMGLGKTIQTI+ L++
Sbjct: 870 KEKVKQPSIL--IGGELMKYQLEGLEWLVSLYNNNLHGILADEMGLGKTIQTIS-LFAYL 926
Query: 293 KE--GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTA 350
KE + L+ PLST+ NW EF W P V+TY G+K + R H
Sbjct: 927 KEFKNNINVKNLIIVPLSTLPNWISEFNRWCPSLNVITYRGNK----LERKHIAK----- 977
Query: 351 NRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFL 410
++ T F + +T+++L+ + + L I W +VVDE HR+K+N+S+F FL
Sbjct: 978 -------KLLEQT--FDICITTFDLVIKEKSFLMKISWNYIVVDEGHRMKNNKSRFHVFL 1028
Query: 411 SGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFAD-----------IS 459
S + + ++LLTGTP P+ F+ F+ F I+
Sbjct: 1029 SEFKSKYRILLTGTPLQNNLSELWSLLNFLLPKIFSSCVDFEKWFVKSLHNEKDVYEHIT 1088
Query: 460 KEEQ---VKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFE 516
+EEQ + RLH +L P MLRR+K DVLK++P K E+ + +ELS QK YK I T+ F+
Sbjct: 1089 EEEQLLIINRLHSVLLPFMLRRVKKDVLKSLPKKYEYNIHIELSLYQKILYKQIQTKGFK 1148
Query: 517 ALNPKGGGQQVSLLNIMMDLKKCCNHPYLF 546
+N G NI+M L+K NHPYLF
Sbjct: 1149 QVNHNGSITTKIFQNIVMQLRKIVNHPYLF 1178
Score = 219 (82.2 bits), Expect = 3.8e-67, Sum P(4) = 3.8e-67
Identities = 52/122 (42%), Positives = 74/122 (60%)
Query: 711 DTVIIYDSDWNPHN-DIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRA 769
D I+ D + N N D F + R G +NL TADTVII+DSD+NPH DIQA R
Sbjct: 1387 DFQIMDDKNVNGGNQDAMIFILSTRSGSLG--LNLQTADTVIIFDSDFNPHQDIQAMCRC 1444
Query: 770 HRIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQANFTKQE--LDDI 827
HRIGQ+N V ++RF+T + VEE V + A+ K+ + V++ G+ K N ++ L DI
Sbjct: 1445 HRIGQKNVVKVFRFITLSGVEELVFKKAQHKLSINDKVIQAGLFNKIYNDEDRQNKLKDI 1504
Query: 828 LR 829
++
Sbjct: 1505 IQ 1506
Score = 206 (77.6 bits), Expect = 8.6e-66, Sum P(4) = 8.6e-66
Identities = 57/157 (36%), Positives = 84/157 (53%)
Query: 681 IDRFNAPGASQ--FVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQ 738
+D N G +Q +F+LSTRSG LG+NL TADTVII+DSD+NPH DIQA R HRIGQ+
Sbjct: 1391 MDDKNVNGGNQDAMIFILSTRSGSLGLNLQTADTVIIFDSDFNPHQDIQAMCRCHRIGQK 1450
Query: 739 N-----KYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERV 793
N ++I L+ + ++ + H + + + G NK IY R + + +
Sbjct: 1451 NVVKVFRFITLSGVEELVFKKAQ---HK-LSINDKVIQAGLFNK--IYNDEDRQNKLKDI 1504
Query: 794 TQVAKRKMMLTHLVVRPGMGGKQANFTKQELDDILRF 830
Q ++ M TH P + ++EL+ L F
Sbjct: 1505 IQRNQKNDMTTH-PTNPLLLNYYMKRNEEELEYFLDF 1540
Score = 118 (46.6 bits), Expect = 3.8e-67, Sum P(4) = 3.8e-67
Identities = 23/42 (54%), Positives = 31/42 (73%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFN 685
F MTK+++IL DYL+ GYKY R+DGNI R++ ID+FN
Sbjct: 1215 FSQMTKLMNILCDYLEFRGYKYHRLDGNIGLQERKKIIDQFN 1256
Score = 37 (18.1 bits), Expect = 3.8e-67, Sum P(4) = 3.8e-67
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 83 QLLKSYMKKMNN-DF 96
+++K Y+K MN DF
Sbjct: 35 KIIKEYIKNMNEEDF 49
>UNIPROTKB|O96239 [details] [associations]
symbol:PFB0730w "DEAD/DEAH box helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0032508 "DNA duplex unwinding" evidence=ISS] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0006338
GO:GO:0016514 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0003678 KO:K11647 EMBL:AE001362 OMA:NENMNMS PIR:F71607
RefSeq:XP_001349665.1 ProteinModelPortal:O96239
EnsemblProtists:PFB0730w:mRNA GeneID:812747 KEGG:pfa:PFB0730w
EuPathDB:PlasmoDB:PF3D7_0216000 Uniprot:O96239
Length = 1997
Score = 496 (179.7 bits), Expect = 3.8e-67, Sum P(4) = 3.8e-67
Identities = 125/330 (37%), Positives = 176/330 (53%)
Query: 233 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 292
K+ KQP L G +L YQLEG+ WL + N+ ILADEMGLGKTIQTI+ L++
Sbjct: 870 KEKVKQPSIL--IGGELMKYQLEGLEWLVSLYNNNLHGILADEMGLGKTIQTIS-LFAYL 926
Query: 293 KE--GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTA 350
KE + L+ PLST+ NW EF W P V+TY G+K + R H
Sbjct: 927 KEFKNNINVKNLIIVPLSTLPNWISEFNRWCPSLNVITYRGNK----LERKHIAK----- 977
Query: 351 NRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFL 410
++ T F + +T+++L+ + + L I W +VVDE HR+K+N+S+F FL
Sbjct: 978 -------KLLEQT--FDICITTFDLVIKEKSFLMKISWNYIVVDEGHRMKNNKSRFHVFL 1028
Query: 411 SGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFAD-----------IS 459
S + + ++LLTGTP P+ F+ F+ F I+
Sbjct: 1029 SEFKSKYRILLTGTPLQNNLSELWSLLNFLLPKIFSSCVDFEKWFVKSLHNEKDVYEHIT 1088
Query: 460 KEEQ---VKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFE 516
+EEQ + RLH +L P MLRR+K DVLK++P K E+ + +ELS QK YK I T+ F+
Sbjct: 1089 EEEQLLIINRLHSVLLPFMLRRVKKDVLKSLPKKYEYNIHIELSLYQKILYKQIQTKGFK 1148
Query: 517 ALNPKGGGQQVSLLNIMMDLKKCCNHPYLF 546
+N G NI+M L+K NHPYLF
Sbjct: 1149 QVNHNGSITTKIFQNIVMQLRKIVNHPYLF 1178
Score = 219 (82.2 bits), Expect = 3.8e-67, Sum P(4) = 3.8e-67
Identities = 52/122 (42%), Positives = 74/122 (60%)
Query: 711 DTVIIYDSDWNPHN-DIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRA 769
D I+ D + N N D F + R G +NL TADTVII+DSD+NPH DIQA R
Sbjct: 1387 DFQIMDDKNVNGGNQDAMIFILSTRSGSLG--LNLQTADTVIIFDSDFNPHQDIQAMCRC 1444
Query: 770 HRIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQANFTKQE--LDDI 827
HRIGQ+N V ++RF+T + VEE V + A+ K+ + V++ G+ K N ++ L DI
Sbjct: 1445 HRIGQKNVVKVFRFITLSGVEELVFKKAQHKLSINDKVIQAGLFNKIYNDEDRQNKLKDI 1504
Query: 828 LR 829
++
Sbjct: 1505 IQ 1506
Score = 206 (77.6 bits), Expect = 8.6e-66, Sum P(4) = 8.6e-66
Identities = 57/157 (36%), Positives = 84/157 (53%)
Query: 681 IDRFNAPGASQ--FVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQ 738
+D N G +Q +F+LSTRSG LG+NL TADTVII+DSD+NPH DIQA R HRIGQ+
Sbjct: 1391 MDDKNVNGGNQDAMIFILSTRSGSLGLNLQTADTVIIFDSDFNPHQDIQAMCRCHRIGQK 1450
Query: 739 N-----KYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERV 793
N ++I L+ + ++ + H + + + G NK IY R + + +
Sbjct: 1451 NVVKVFRFITLSGVEELVFKKAQ---HK-LSINDKVIQAGLFNK--IYNDEDRQNKLKDI 1504
Query: 794 TQVAKRKMMLTHLVVRPGMGGKQANFTKQELDDILRF 830
Q ++ M TH P + ++EL+ L F
Sbjct: 1505 IQRNQKNDMTTH-PTNPLLLNYYMKRNEEELEYFLDF 1540
Score = 118 (46.6 bits), Expect = 3.8e-67, Sum P(4) = 3.8e-67
Identities = 23/42 (54%), Positives = 31/42 (73%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFN 685
F MTK+++IL DYL+ GYKY R+DGNI R++ ID+FN
Sbjct: 1215 FSQMTKLMNILCDYLEFRGYKYHRLDGNIGLQERKKIIDQFN 1256
Score = 37 (18.1 bits), Expect = 3.8e-67, Sum P(4) = 3.8e-67
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 83 QLLKSYMKKMNN-DF 96
+++K Y+K MN DF
Sbjct: 35 KIIKEYIKNMNEEDF 49
>SGD|S000005816 [details] [associations]
symbol:SNF2 "Catalytic subunit of the SWI/SNF chromatin
remodeling complex" species:4932 "Saccharomyces cerevisiae"
[GO:0006261 "DNA-dependent DNA replication" evidence=IMP]
[GO:0016514 "SWI/SNF complex" evidence=IDA;IMP] [GO:0006338
"chromatin remodeling" evidence=IGI;IMP] [GO:0031496 "positive
regulation of mating type switching" evidence=IMP] [GO:0031492
"nucleosomal DNA binding" evidence=IDA] [GO:0042766 "nucleosome
mobilization" evidence=IMP;IDA] [GO:0006302 "double-strand break
repair" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IMP;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IMP;IDA]
[GO:0044109 "cellular alcohol catabolic process" evidence=IMP]
[GO:0005987 "sucrose catabolic process" evidence=IMP] [GO:0070577
"histone acetyl-lysine binding" evidence=IMP;IDA] [GO:0042148
"strand invasion" evidence=IMP] [GO:0061412 "positive regulation of
transcription from RNA polymerase II promoter in response to amino
acid starvation" evidence=IMP] [GO:0001102 "RNA polymerase II
activating transcription factor binding" evidence=IPI]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00384 SMART:SM00490
SMART:SM00951 SGD:S000005816 GO:GO:0005524 EMBL:BK006948
GO:GO:0006351 GO:GO:0006261 GO:GO:0016514 GO:GO:0006302
GO:GO:0004386 GO:GO:0005987 GO:GO:0042766 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 GeneTree:ENSGT00550000074659 InterPro:IPR014012
PROSITE:PS51204 EMBL:X89633 GO:GO:0008094 HOGENOM:HOG000172362
GO:GO:0031492 RefSeq:NP_014933.3 GeneID:854465 KEGG:sce:YOR290C
KO:K11786 GO:GO:0061412 GO:GO:0042148 OrthoDB:EOG4D565R EMBL:M61703
EMBL:X57837 EMBL:D90459 EMBL:Z75198 EMBL:Z75199 PIR:S15047
RefSeq:NP_014935.3 ProteinModelPortal:P22082 SMR:P22082
DIP:DIP-1150N IntAct:P22082 MINT:MINT-600461 STRING:P22082
PaxDb:P22082 PeptideAtlas:P22082 EnsemblFungi:YOR290C GeneID:854467
KEGG:sce:YOR292C CYGD:YOR290c OMA:HPNFLSK NextBio:976750
Genevestigator:P22082 GermOnline:YOR290C GO:GO:0044109
GO:GO:0031496 Uniprot:P22082
Length = 1703
Score = 467 (169.5 bits), Expect = 1.3e-65, Sum P(3) = 1.3e-65
Identities = 116/341 (34%), Positives = 182/341 (53%)
Query: 231 LRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYS 290
+++ +KQP L G L YQ++G+ W+ + +++ ILADEMGLGKTIQTI+ L
Sbjct: 751 IKEDIKKQPSIL--VGGTLKDYQIKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTY 808
Query: 291 LFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTA 350
L++ + +GP+LV PLST+ NW EF WAP +++ G +
Sbjct: 809 LYEMKNIRGPYLVIVPLSTLSNWSSEFAKWAPTLRTISFKGSPN---------------- 852
Query: 351 NRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFL 410
R K +IR+ +F V+LT++E I + ALL ++W +++DE HR+K+ QSK L
Sbjct: 853 ERKAKQAKIRAG--EFDVVLTTFEYIIKERALLSKVKWVHMIIDEGHRMKNAQSKLSLTL 910
Query: 411 SG-YSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQ----AEFA--------D 457
+ Y +L+LTGTP P+ FN + SF FA +
Sbjct: 911 NTHYHADYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIE 970
Query: 458 ISKEEQ---VKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRN 514
+S+EE ++RLH +L P +LRRLK DV K +P K E +V+ ++S +Q+ Y+ +L
Sbjct: 971 LSEEETLLVIRRLHKVLRPFLLRRLKKDVEKELPDKVEKVVKCKMSALQQIMYQQMLKYR 1030
Query: 515 FEALNPKGGGQQVSLL---NIMMDLKKCCNHPYLFPAAAEE 552
+ + + V L N +M LKK CNHP++F ++
Sbjct: 1031 RLFIGDQNNKKMVGLRGFNNQIMQLKKICNHPFVFEEVEDQ 1071
Score = 300 (110.7 bits), Expect = 1.3e-65, Sum P(3) = 1.3e-65
Identities = 57/109 (52%), Positives = 78/109 (71%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F+ MT+++DI+ED+L KY R+DG+ R E + FNAP + F+LSTR+GGL
Sbjct: 1109 FFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLRLFNAPDSEYLCFILSTRAGGL 1168
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV 750
G+NL TADTVII+D+DWNPH D+QA RAHRIGQ+N + + L T ++V
Sbjct: 1169 GLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTNSV 1217
Score = 217 (81.4 bits), Expect = 6.5e-57, Sum P(3) = 6.5e-57
Identities = 47/108 (43%), Positives = 69/108 (63%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
P ++ F + R G +NL TADTVII+D+DWNPH D+QA RAHRIGQ+N+V I
Sbjct: 1152 PDSEYLCFILSTRAGGLG--LNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRIL 1209
Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQANFTKQELDDILR 829
R +T NSVEE + + A +K+ + V++ G ++ T +E + +LR
Sbjct: 1210 RLITTNSVEEVILERAYKKLDIDGKVIQAGKFDNKS--TSEEQEALLR 1255
Score = 42 (19.8 bits), Expect = 1.3e-65, Sum P(3) = 1.3e-65
Identities = 16/67 (23%), Positives = 34/67 (50%)
Query: 910 RRSAKKKEMSKQE--RDRPLPPLLARVGGNIEVLNQLEELLSDMKSDV---SRLPATLAR 964
RR ++ + ++E +D + +LAR + VL +++E S + ++ SRL +
Sbjct: 1264 RRKKRESGVEEEEELKDSEINEILARNDEEMAVLTRMDEDRSKKEEELGVKSRL-LEKSE 1322
Query: 965 IPPVAQR 971
+P + R
Sbjct: 1323 LPDIYSR 1329
>UNIPROTKB|F1P5V4 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0001655 "urogenital system development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=IEA] [GO:0010216 "maintenance of DNA
methylation" evidence=IEA] [GO:0031508 "centromeric heterochromatin
assembly" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0046651 "lymphocyte
proliferation" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216 OMA:ETFYTAI
GO:GO:0006346 GO:GO:0046651 GeneTree:ENSGT00550000075106
EMBL:AADN02027839 EMBL:AADN02027838 IPI:IPI00823178
Ensembl:ENSGALT00000008749 ArrayExpress:F1P5V4 Uniprot:F1P5V4
Length = 839
Score = 419 (152.6 bits), Expect = 2.1e-65, Sum P(3) = 2.1e-65
Identities = 118/337 (35%), Positives = 171/337 (50%)
Query: 204 ELQEDEDGASGSKPR--RYTPPPEKPTTDLRKKYEKQP-PFLDD---TGMQLHAYQLEGI 257
+LQ++ D S K R + K D +K+ QP PF TG + YQ+EG+
Sbjct: 171 DLQKNGDSNSVIKDRLCQAVRHSAKQFLDPVRKFNGQPVPFQQPKIFTGGVMRWYQVEGM 230
Query: 258 NWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREF 317
WLR W I+ ILADEMGLGKTIQ I + + + G GPFLV PLST+ NW EF
Sbjct: 231 EWLRMLWENGINGILADEMGLGKTIQCIATIALMVERG-VPGPFLVCGPLSTLPNWMSEF 289
Query: 318 ETWAPDFYVVTYVGDKDCR--IVLRDHDISWEDTANRGGKPCRIRSSTVKFH-VLLTSYE 374
+ + P+ ++ Y G + R +V + H R ++K H V++TS+E
Sbjct: 290 KRFTPEIPLMLYHGAQQERRKLVRKIHG----------------RQGSLKIHPVVITSFE 333
Query: 375 LITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXX 434
+ D L S W L+VDE HR+K+ + + L ++ NKLLLTGTP
Sbjct: 334 IAMRDRNALQSCFWKYLIVDEGHRIKNMNCRLIRELKRFNADNKLLLTGTPLQNNLAELW 393
Query: 435 XXXXXXTPEKFNDLTSFQAEF--------AD--ISKEEQ---VKRLHDLLGPHMLRRLKA 481
P+ F+DL SF++ F A+ I+KE++ + LH +L P +LRRLK+
Sbjct: 394 SLLNFLLPDVFDDLKSFESWFDITSITETAEDIIAKEKEQNILHMLHQILTPFLLRRLKS 453
Query: 482 DVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEAL 518
DV +P K E +V L+ Q+ +Y I+ R L
Sbjct: 454 DVALEVPPKREVVVYAPLAKKQETFYTAIVNRTIRNL 490
Score = 290 (107.1 bits), Expect = 2.1e-65, Sum P(3) = 2.1e-65
Identities = 62/122 (50%), Positives = 83/122 (68%)
Query: 635 IPGLKES----IEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGAS 690
+P LK+ + F MT MLDIL DY G+K+ R+DG+++ S R+E++ +FN
Sbjct: 608 LPELKKRGHKVLMFSQMTMMLDILMDYCYLRGFKFSRLDGSMSYSDREENMHQFNND-PE 666
Query: 691 QFVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYI--NLATAD 748
F+FL+STR+GGLGINL ADTVIIYDSDWNP +D+QA R HRIGQ + L TA+
Sbjct: 667 VFLFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTAN 726
Query: 749 TV 750
T+
Sbjct: 727 TI 728
Score = 206 (77.6 bits), Expect = 1.3e-56, Sum P(3) = 1.3e-56
Identities = 50/123 (40%), Positives = 69/123 (56%)
Query: 704 GINLATADTVIIY-DSDWNPH---NDIQAF-----SRAHRIGQQNKYINLATADTVIIYD 754
G + D + Y D + N H ND + F +RA +G INL ADTVIIYD
Sbjct: 639 GFKFSRLDGSMSYSDREENMHQFNNDPEVFLFLVSTRAGGLG-----INLTAADTVIIYD 693
Query: 755 SDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGM-- 812
SDWNP +D+QA R HRIGQ V++YR VT N++++++ + A K L L++
Sbjct: 694 SDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLIIHKNQFK 753
Query: 813 GGK 815
GGK
Sbjct: 754 GGK 756
Score = 84 (34.6 bits), Expect = 2.1e-65, Sum P(3) = 2.1e-65
Identities = 18/41 (43%), Positives = 21/41 (51%)
Query: 516 EALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAPVQ 556
E P + L NIMM L+KCCNHPYL + A Q
Sbjct: 547 EVSMPMDSEVNLKLQNIMMLLRKCCNHPYLIEYPLDPATQQ 587
>UNIPROTKB|E1BCV0 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
GeneTree:ENSGT00550000075106 EMBL:DAAA02058849 EMBL:DAAA02058850
EMBL:DAAA02058851 IPI:IPI00710948 Ensembl:ENSBTAT00000007848
Uniprot:E1BCV0
Length = 816
Score = 423 (154.0 bits), Expect = 3.7e-65, Sum P(3) = 3.7e-65
Identities = 118/330 (35%), Positives = 169/330 (51%)
Query: 204 ELQEDEDGASGSKPR--RYTPPPEKPTTDLRKKYEKQP-PFLDD---TGMQLHAYQLEGI 257
+LQ+++D S K R + K D +K QP PF TG + YQ+EG+
Sbjct: 150 DLQKNKDSNSKIKDRLSQTVRQNTKFFFDPVRKCNGQPVPFQQPKHFTGGVMRWYQVEGM 209
Query: 258 NWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREF 317
WLR W I+ ILADEMGLGKT+Q I + + + G GPFLV PLST+ NW EF
Sbjct: 210 EWLRMLWENGINGILADEMGLGKTVQCIATIALMIQRG-VPGPFLVCGPLSTLPNWMAEF 268
Query: 318 ETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFH-VLLTSYELI 376
+ + P+ + Y G + R +L H R T++ H V++TS+E+
Sbjct: 269 KRFTPEIPTMLYHGTQQERRILVKH--------------IHERKGTLQIHPVVITSFEIA 314
Query: 377 TNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXX 436
D L + W L+VDE HR+K+ + + + L ++ NKLLLTGTP
Sbjct: 315 MRDRTTLQNCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSL 374
Query: 437 XXXXTPEKFNDLTSFQAEF--------AD--ISKE-EQ--VKRLHDLLGPHMLRRLKADV 483
P+ F+DL SF++ F A+ I+KE EQ + LH +L P +LRRLK+DV
Sbjct: 375 LNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQNVLHMLHQILTPFLLRRLKSDV 434
Query: 484 LKNMPSKSEFIVRVELSPMQKKYYKYILTR 513
+P K E +V LS Q+ +Y I+ R
Sbjct: 435 ALEVPPKREVVVYAPLSKKQEIFYTAIVNR 464
Score = 286 (105.7 bits), Expect = 3.7e-65, Sum P(3) = 3.7e-65
Identities = 57/109 (52%), Positives = 75/109 (68%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MT+MLDIL DY + + R+DG+++ S R+++I FN F+FL+STR+GGL
Sbjct: 599 FSQMTRMLDILMDYCHFRNFNFSRLDGSMSYSEREKNIHSFNTD-PDVFIFLVSTRAGGL 657
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYI--NLATADTV 750
GINL ADTVIIYDSDWNP +D+QA R HRIGQ + L TA+T+
Sbjct: 658 GINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTRPVVVYRLVTANTI 706
Score = 207 (77.9 bits), Expect = 6.9e-57, Sum P(3) = 6.9e-57
Identities = 46/109 (42%), Positives = 64/109 (58%)
Query: 720 WNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVM 779
+N D+ F + R G INL ADTVIIYDSDWNP +D+QA R HRIGQ V+
Sbjct: 639 FNTDPDVFIFLVSTRAGGLG--INLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTRPVV 696
Query: 780 IYRFVTRNSVEERVTQVAKRKMMLTHLVVRPG--MGGKQA-NFTKQELD 825
+YR VT N++++++ + A K L L++ GG+ N +K LD
Sbjct: 697 VYRLVTANTIDQKIVERAAAKRKLEKLIIHKNHFKGGQSGLNQSKNFLD 745
Score = 80 (33.2 bits), Expect = 3.7e-65, Sum P(3) = 3.7e-65
Identities = 14/19 (73%), Positives = 16/19 (84%)
Query: 527 VSLLNIMMDLKKCCNHPYL 545
+ L NIMM L+KCCNHPYL
Sbjct: 536 LKLQNIMMLLRKCCNHPYL 554
Score = 48 (22.0 bits), Expect = 2.5e-36, Sum P(2) = 2.5e-36
Identities = 10/42 (23%), Positives = 24/42 (57%)
Query: 942 NQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRL 983
N+LE+L+S ++ +V R + P+ +++ ++I+ L
Sbjct: 504 NELEKLISQIQPEVDRERTIVETSVPIESEVNLKLQNIMMLL 545
>ASPGD|ASPL0000042729 [details] [associations]
symbol:AN2278 species:162425 "Emericella nidulans"
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194
SMART:SM00297 SMART:SM00490 SMART:SM00951 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 EMBL:BN001307
GO:GO:0004386 EMBL:AACD01000038 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R RefSeq:XP_659882.1
ProteinModelPortal:Q5BB02 STRING:Q5BB02
EnsemblFungi:CADANIAT00008970 GeneID:2875521 KEGG:ani:AN2278.2
OMA:GSDHSSP Uniprot:Q5BB02
Length = 1407
Score = 312 (114.9 bits), Expect = 1.6e-64, Sum P(3) = 1.6e-64
Identities = 59/109 (54%), Positives = 81/109 (74%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F+ MT++++I+ED+L G KY R+DG+ R + + FNAP + F FLLSTR+GGL
Sbjct: 878 FFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDDRSDLLKLFNAPDSEYFCFLLSTRAGGL 937
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV 750
G+NL TADTVII+DSDWNPH D+QA RAHRIGQ+N + + L T+++V
Sbjct: 938 GLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRILRLITSNSV 986
Score = 255 (94.8 bits), Expect = 1.6e-64, Sum P(3) = 1.6e-64
Identities = 64/176 (36%), Positives = 93/176 (52%)
Query: 366 FHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGY-SIQNKLLLTGT 424
F VLLT+YE I D +L I+W ++VDE HR+K+ QSK LS Y + + +L+LTGT
Sbjct: 636 FQVLLTTYEYIIKDRPILSKIKWTHMIVDEGHRMKNTQSKLSSTLSQYYTSRYRLILTGT 695
Query: 425 PXXXXXXXXXXXXXXXTPEKFNDLTSFQ----AEFA--------DISKEEQ---VKRLHD 469
P P F + SF FA D+++EEQ ++RLH
Sbjct: 696 PLQNNLPELWALLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMDLTEEEQLLVIRRLHK 755
Query: 470 LLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQ 525
+L P +LRRLK DV K++P K E +++ S +Q K K + T N ++ GG+
Sbjct: 756 VLRPFLLRRLKKDVEKDLPDKQERVIKCRFSALQAKLNKQLATHNKMVVSDGKGGK 811
Score = 238 (88.8 bits), Expect = 1.6e-64, Sum P(3) = 1.6e-64
Identities = 55/143 (38%), Positives = 77/143 (53%)
Query: 207 EDEDGASGSKPR---RYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYS 263
+DED ASGS R ++++ +QP L G L YQ++G+ W+
Sbjct: 494 DDEDIASGSDEEGEGRRKIDYYAVAHRIKEEITEQPSIL--VGGTLKEYQMKGLQWMISL 551
Query: 264 WGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPD 323
+ N++ ILADEMGLGKTIQTI+ + + + GPFLV PLST+ NW EFE WAP
Sbjct: 552 YNNNLNGILADEMGLGKTIQTISLITHIIERKRNNGPFLVIVPLSTLTNWNLEFEKWAPS 611
Query: 324 FYVVTYVGDKDCRIVLRDHDISW 346
+ Y G + R + +I W
Sbjct: 612 VSRIVYKGPPNAR-KQQQQNIRW 633
Score = 226 (84.6 bits), Expect = 3.1e-55, Sum P(3) = 3.1e-55
Identities = 49/108 (45%), Positives = 70/108 (64%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
P ++ F + R G +NL TADTVII+DSDWNPH D+QA RAHRIGQ+N+V I
Sbjct: 921 PDSEYFCFLLSTRAGGLG--LNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRIL 978
Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQANFTKQELDDILR 829
R +T NSVEE++ + A+ K+ + V++ G ++ T +E D +LR
Sbjct: 979 RLITSNSVEEKILERAQFKLDMDGKVIQAGKFDNKS--TNEERDALLR 1024
Score = 195 (73.7 bits), Expect = 3.0e-58, Sum P(3) = 3.0e-58
Identities = 46/137 (33%), Positives = 72/137 (52%)
Query: 457 DISKEEQ---VKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTR 513
D+++EEQ ++RLH +L P +LRRLK DV K++P K E +++ S +Q K K + T
Sbjct: 740 DLTEEEQLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKQERVIKCRFSALQAKLNKQLATH 799
Query: 514 NFEALNPKGGGQ--QVSLLNIMMDLKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGX 571
N ++ GG+ L N++M L+K CNHP++F ++ V G+ + R AG
Sbjct: 800 NKMVVSDGKGGKVGMRGLSNMLMQLRKLCNHPFVFEQVEDQ--VNPGRGTNDLIWRTAGK 857
Query: 572 XXXXXXXXXXXXEDGHR 588
GHR
Sbjct: 858 FELLDRILPKFKATGHR 874
>SGD|S000001388 [details] [associations]
symbol:STH1 "ATPase component of the RSC chromatin remodeling
complex" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0007126 "meiosis" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA;IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;IMP] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0006337 "nucleosome
disassembly" evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=IGI;IMP] [GO:0031055 "chromatin remodeling at centromere"
evidence=IMP] [GO:0007059 "chromosome segregation" evidence=IGI]
[GO:0016586 "RSC complex" evidence=IDA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IDA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IMP] [GO:0015616 "DNA translocase activity" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SGD:S000001388 GO:GO:0005524 GO:GO:0007126 GO:GO:0000086
GO:GO:0007010 GO:GO:0007059 GO:GO:0000775 GO:GO:0006355
EMBL:BK006942 GO:GO:0006302 GO:GO:0004386 GO:GO:0006368
GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016586 GO:GO:0043044 GO:GO:0016584
EMBL:DQ115392 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
GO:GO:0070577 InterPro:IPR018359 EMBL:Z46833 InterPro:IPR014012
PROSITE:PS51204 GeneTree:ENSGT00670000098110 HOGENOM:HOG000172362
GO:GO:0015616 GO:GO:0031055 KO:K11786 OrthoDB:EOG4D565R EMBL:D10595
EMBL:M83755 PIR:S49883 RefSeq:NP_012140.1 ProteinModelPortal:P32597
SMR:P32597 DIP:DIP-5889N IntAct:P32597 MINT:MINT-615490
STRING:P32597 PaxDb:P32597 PeptideAtlas:P32597 EnsemblFungi:YIL126W
GeneID:854680 KEGG:sce:YIL126W CYGD:YIL126w OMA:MEDFLRM
NextBio:977286 Genevestigator:P32597 GermOnline:YIL126W
Uniprot:P32597
Length = 1359
Score = 319 (117.4 bits), Expect = 3.3e-64, Sum P(3) = 3.3e-64
Identities = 60/109 (55%), Positives = 81/109 (74%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F+ MT+++DI+ED+L + KY R+DG+ R E ++ FNAP + F FLLSTR+GGL
Sbjct: 813 FFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCFLLSTRAGGL 872
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV 750
G+NL TADTVII+D+DWNPH D+QA RAHRIGQ+N + + L T D+V
Sbjct: 873 GLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSV 921
Score = 246 (91.7 bits), Expect = 3.3e-64, Sum P(3) = 3.3e-64
Identities = 59/165 (35%), Positives = 93/165 (56%)
Query: 366 FHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKF-FKFLSGYSIQNKLLLTGT 424
F VLLT+YE I D +LL +WA +++DE HR+K+ QSK F Y +N+L+LTGT
Sbjct: 569 FDVLLTTYEYIIKDKSLLSKHDWAHMIIDEGHRMKNAQSKLSFTISHYYRTRNRLILTGT 628
Query: 425 PXXXXXXXXXXXXXXXTPEKFNDLTSFQ----AEFA--------DISKEEQ---VKRLHD 469
P P+ FN +F+ FA ++++EE ++RLH
Sbjct: 629 PLQNNLPELWALLNFVLPKIFNSAKTFEDWFNTPFANTGTQEKLELTEEETLLIIRRLHK 688
Query: 470 LLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRN 514
+L P +LRRLK +V K++P K E +++ +LS +Q++ Y+ +L N
Sbjct: 689 VLRPFLLRRLKKEVEKDLPDKVEKVIKCKLSGLQQQLYQQMLKHN 733
Score = 236 (88.1 bits), Expect = 3.3e-64, Sum P(3) = 3.3e-64
Identities = 51/114 (44%), Positives = 69/114 (60%)
Query: 231 LRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYS 290
+++K +KQP L G L YQL G+ W+ + +++ ILADEMGLGKTIQ+I+ +
Sbjct: 454 IKEKIDKQPSIL--VGGTLKEYQLRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITY 511
Query: 291 LFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 344
L++ GPFLV PLSTI NW EFE WAP + Y G + R L+ H I
Sbjct: 512 LYEVKKDIGPFLVIVPLSTITNWTLEFEKWAPSLNTIIYKGTPNQRHSLQ-HQI 564
Score = 213 (80.0 bits), Expect = 9.6e-53, Sum P(3) = 9.6e-53
Identities = 45/102 (44%), Positives = 65/102 (63%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
P +D F + R G +NL TADTVII+D+DWNPH D+QA RAHRIGQ+N+V I
Sbjct: 856 PDSDYFCFLLSTRAGGLG--LNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRIL 913
Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQANFTKQE 823
R +T +SVEE + + A +K+ + V++ G ++ +QE
Sbjct: 914 RLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKSTAEEQE 955
Score = 173 (66.0 bits), Expect = 1.4e-56, Sum P(3) = 1.4e-56
Identities = 46/142 (32%), Positives = 72/142 (50%)
Query: 454 EFADISKEEQ---VKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYI 510
E ++++EE ++RLH +L P +LRRLK +V K++P K E +++ +LS +Q++ Y+ +
Sbjct: 670 EKLELTEEETLLIIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVIKCKLSGLQQQLYQQM 729
Query: 511 LTRN--FEALNPKGG--GQQVSLLNIMMDLKKCCNHPYLFPAAAEEAPVQGGQYEIQALT 566
L N F +G G L N +M L+K CNHP++F E V + L
Sbjct: 730 LKHNALFVGAGTEGATKGGIKGLNNKIMQLRKICNHPFVFDEV--EGVVNPSRGNSDLLF 787
Query: 567 RAAGXXXXXXXXXXXXXEDGHR 588
R AG GHR
Sbjct: 788 RVAGKFELLDRVLPKFKASGHR 809
>DICTYBASE|DDB_G0271052 [details] [associations]
symbol:snf2b "SNF2-related protein Snf2a"
species:44689 "Dictyostelium discoideum" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00951 dictyBase:DDB_G0271052 GO:GO:0005524 GO:GO:0005654
EMBL:AAFI02000005 GO:GO:0003677 GO:GO:0006357 GO:GO:0004386
InterPro:IPR011050 SUPFAM:SSF51126 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF47370
KO:K11647 InterPro:IPR014012 PROSITE:PS51204 RefSeq:XP_646649.1
ProteinModelPortal:Q55C32 EnsemblProtists:DDB0220695 GeneID:8617621
KEGG:ddi:DDB_G0271052 InParanoid:Q55C32 OMA:NINDNPN Uniprot:Q55C32
Length = 3247
Score = 460 (167.0 bits), Expect = 5.7e-64, Sum P(2) = 5.7e-64
Identities = 120/329 (36%), Positives = 169/329 (51%)
Query: 237 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 296
+QP L+ G +L YQ++G+ W+ + ++ ILADEMGLGKTIQTI + L +
Sbjct: 1701 EQPALLE--GGKLKPYQMQGLQWMVSLYNNKLNGILADEMGLGKTIQTIALVSYLIEVKK 1758
Query: 297 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKP 356
GPFLV PLST+ NW +EF WAP V Y GDK R +E+ G
Sbjct: 1759 NNGPFLVVVPLSTLSNWGQEFSKWAPKVKRVLYYGDKPAR------KSKFEEFIAPG--- 1809
Query: 357 CRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFL-SGYSI 415
+F+ ++T+YE I D L I+W L+VDE HR+K+ SK L + YS
Sbjct: 1810 --------QFNAVVTTYEYIIKDKNALSKIKWNYLIVDEGHRMKNYTSKLSIILGTSYSS 1861
Query: 416 QNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQ----AEFA------DISKEEQ-- 463
+ +LLLTGTP P F+ + F+ A FA ++++EEQ
Sbjct: 1862 RYRLLLTGTPLQNSLPELWALLNFLLPTIFDCVEDFEQWFNAPFAQTGEKIEMNEEEQLL 1921
Query: 464 -VKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKG 522
++RLH +L P +LRRLK +V +P K E +++ ++S Q K Y I T+ L G
Sbjct: 1922 IIQRLHKVLRPFLLRRLKKEVEAQLPDKVEKVLKCDMSAFQAKMYDLIKTKGVSKLASSG 1981
Query: 523 GGQ-----QVSLLNIMMDLKKCCNHPYLF 546
G L N + L+K CNHPYLF
Sbjct: 1982 GADGNPKLAKGLKNTYVQLRKICNHPYLF 2010
Score = 292 (107.8 bits), Expect = 5.7e-64, Sum P(2) = 5.7e-64
Identities = 69/192 (35%), Positives = 109/192 (56%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MT++++ILE + + YK+ R+DG+ R ++ FNAP + F+F+LSTR+GGL
Sbjct: 2048 FSQMTQLINILEVFFAYKDYKFLRLDGSTKSDERGHLLELFNAPNSEYFIFVLSTRAGGL 2107
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV---IIYDSDWN 758
G+NL TADTVII+DSDWNP D+QA RAHRIGQ+ + + L TA +V I+ +++
Sbjct: 2108 GLNLQTADTVIIFDSDWNPQMDLQAQDRAHRIGQKQTVRVLRLVTAHSVEESILARANFK 2167
Query: 759 PHND---IQAFSRAHRIGQQN-KVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVR-PGMG 813
D IQA ++ + + K M+ +T++ E Q + ++ R P
Sbjct: 2168 KELDKKIIQAGQFNNKSNRSDRKKMLEDLMTQDETAEMEKQTVPTDSQINEMIARSPEEF 2227
Query: 814 GKQANFTKQELD 825
N K+ ++
Sbjct: 2228 ELYENMDKERME 2239
Score = 37 (18.1 bits), Expect = 5.5e-19, Sum P(2) = 5.5e-19
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 629 EDENEDIPGLKESIEFYNMTKMLDILED 656
E E E+ E I N+T +DI D
Sbjct: 1427 EKEGEEDAKQSEKISIMNITNDVDIDTD 1454
>UNIPROTKB|F1SC64 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
GeneTree:ENSGT00550000075106 EMBL:CU468514
Ensembl:ENSSSCT00000011474 Uniprot:F1SC64
Length = 838
Score = 419 (152.6 bits), Expect = 6.1e-64, Sum P(3) = 6.1e-64
Identities = 132/424 (31%), Positives = 204/424 (48%)
Query: 113 MARLNRHNINDEELEKKYYRYGIKPEWLIANRVINSKTLRDGSTIYLVKWR---DLPYDK 169
+ ++ + + +++ ++K R K E L + NS + +T+ + K R D Y+
Sbjct: 83 LTKMEQQQLEEQKKKEKLER---KKESLKVTKGKNSIDASEENTVVMRKKRGREDESYNI 139
Query: 170 ATWEDENEDIPGLKESIEFYNXXXXXXXXXXXXXELQEDEDGASGSKPR--RYTPPPEKP 227
+ + E + K++ + +LQ++ D S K R + K
Sbjct: 140 SEVMSKEEILSVAKKNKK--ETENESSCSNLCVEDLQKNRDSNSIIKDRLSQTVRQNTKF 197
Query: 228 TTDLRKKYEKQP-PFLDD---TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQ 283
D +K QP PF TG + YQ+EG+ WLR W I+ ILADEMGLGKT+Q
Sbjct: 198 FFDPVRKCNGQPVPFQQPKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQ 257
Query: 284 TITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHD 343
I + + + G GPFLV PLST+ NW EF+ + P+ + Y G + R L +H
Sbjct: 258 CIATIALMIQRG-VPGPFLVCGPLSTLPNWMAEFQRFTPEIPTMLYHGSQQERRKLVNH- 315
Query: 344 ISWEDTANRGGKPCRIRSSTVKFH-VLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSN 402
R T++ H V++TS+E+ D +L W L+VDE HR+K+
Sbjct: 316 -------------IHKRKGTLQIHPVVITSFEIAMRDRNVLQHCYWKYLIVDEGHRIKNM 362
Query: 403 QSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEF------- 455
+ + + L ++ NKLLLTGTP P+ F+DL SF++ F
Sbjct: 363 KCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNFLLPDVFDDLKSFESWFDITSLSE 422
Query: 456 -AD--ISKE-EQ--VKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKY 509
A+ I+KE EQ + LH +L P +LRRLK+DV +P K E +V LS Q+ +Y
Sbjct: 423 TAEDIIAKEREQNVLHMLHQILTPFLLRRLKSDVALEVPPKREVVVYAPLSKKQEVFYTA 482
Query: 510 ILTR 513
I+ R
Sbjct: 483 IVNR 486
Score = 280 (103.6 bits), Expect = 6.1e-64, Sum P(3) = 6.1e-64
Identities = 55/109 (50%), Positives = 75/109 (68%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MT+MLDIL DY + + R+DG+++ + R++++ FN F+FL+STR+GGL
Sbjct: 621 FSQMTRMLDILMDYCHFRNFNFSRLDGSMSYTEREKNMHSFNTD-PDVFIFLVSTRAGGL 679
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYI--NLATADTV 750
GINL ADTVIIYDSDWNP +D+QA R HRIGQ + L TA+T+
Sbjct: 680 GINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTI 728
Score = 207 (77.9 bits), Expect = 2.6e-56, Sum P(3) = 2.6e-56
Identities = 46/109 (42%), Positives = 64/109 (58%)
Query: 720 WNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVM 779
+N D+ F + R G INL ADTVIIYDSDWNP +D+QA R HRIGQ V+
Sbjct: 661 FNTDPDVFIFLVSTRAGGLG--INLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVV 718
Query: 780 IYRFVTRNSVEERVTQVAKRKMMLTHLVVRPG--MGGKQA-NFTKQELD 825
+YR VT N++++++ + A K L L++ GG+ N +K LD
Sbjct: 719 VYRLVTANTIDQKIVERAAAKRKLEKLIIHKNHFKGGQSGLNQSKNFLD 767
Score = 80 (33.2 bits), Expect = 6.1e-64, Sum P(3) = 6.1e-64
Identities = 14/19 (73%), Positives = 16/19 (84%)
Query: 527 VSLLNIMMDLKKCCNHPYL 545
+ L NIMM L+KCCNHPYL
Sbjct: 558 LKLQNIMMLLRKCCNHPYL 576
Score = 52 (23.4 bits), Expect = 3.2e-36, Sum P(2) = 3.2e-36
Identities = 12/42 (28%), Positives = 25/42 (59%)
Query: 942 NQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRL 983
N+LE+L+S ++ +V R A + PV +++ ++I+ L
Sbjct: 526 NELEKLISQIQPEVDRERAVVETNIPVESEVNLKLQNIMMLL 567
>CGD|CAL0000831 [details] [associations]
symbol:orf19.1734 species:5476 "Candida albicans" [GO:0031011
"Ino80 complex" evidence=IEA] [GO:0042766 "nucleosome mobilization"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0043486
"histone exchange" evidence=IEA] [GO:0006348 "chromatin silencing
at telomere" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043618 "regulation of transcription from RNA polymerase II
promoter in response to stress" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
CGD:CAL0000831 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006281 GO:GO:0006351 GO:GO:0016568
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000298 EMBL:AACQ01000297
RefSeq:XP_710247.1 RefSeq:XP_710254.1 STRING:Q59KI4 GeneID:3648140
GeneID:3648148 KEGG:cal:CaO19.1734 KEGG:cal:CaO19.9302 KO:K11665
Uniprot:Q59KI4
Length = 1387
Score = 474 (171.9 bits), Expect = 6.5e-64, Sum P(3) = 6.5e-64
Identities = 122/339 (35%), Positives = 176/339 (51%)
Query: 238 QPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHC 297
QP L T L YQL+G+NWL + Q I+ ILADEMGLGKT+Q+I+ L L + +
Sbjct: 664 QPNMLKCT---LKEYQLKGLNWLANLYEQGINGILADEMGLGKTVQSISVLAYLAETYNM 720
Query: 298 KGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPC 357
GPFLV P ST+ NW++E + P+F V+ Y G+ R +LR W+ + R K
Sbjct: 721 WGPFLVVTPASTLHNWQQEITKFVPEFKVLPYWGNAKDRKILRKF---WDRKSLRYDKDS 777
Query: 358 RIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQN 417
FHVL+TSY+LI D+A ++W +++DEA +KS+ S +K L + +N
Sbjct: 778 -------PFHVLVTSYQLIVADIAYFQKMKWQYMILDEAQAIKSSSSSRWKSLLNLTCRN 830
Query: 418 KLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFA-DISK---------EEQVKRL 467
+LLLTGTP P F+ F FA DI E+Q++RL
Sbjct: 831 RLLLTGTPIQNSMQELWALLHFIMPSIFDSHDEFSDWFAKDIESHAQSNTSLDEQQLRRL 890
Query: 468 HDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTR------NFEALNPK 521
H +L P MLRR+K +V + K E V +L+ QKK Y+ + ++ + L
Sbjct: 891 HMILKPFMLRRIKKNVQSELGDKVEIDVYCDLTTRQKKLYQQLRSQISMSDTDLLELESN 950
Query: 522 GGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAPVQGGQY 560
SL N++M +K CNHP LF A +P G++
Sbjct: 951 STSSDSSLANLVMQFRKVCNHPDLFERADVNSPFSFGKF 989
Score = 276 (102.2 bits), Expect = 6.5e-64, Sum P(3) = 6.5e-64
Identities = 55/109 (50%), Positives = 73/109 (66%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
++ MT+M+ I E+YL + YKY R+DG+ T R+E + + F+F+LSTR+GGL
Sbjct: 1258 YFQMTRMMQIFEEYLAYKSYKYIRLDGSTTIESRREMVQAWQT-NPEIFIFMLSTRAGGL 1316
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ--QNKYINLATADTV 750
G+NL +ADTVI YDSDWNP D QA RAHRIGQ Q K L T +T+
Sbjct: 1317 GLNLTSADTVIFYDSDWNPTIDSQAMDRAHRIGQTKQVKVFRLVTRNTI 1365
Score = 206 (77.6 bits), Expect = 1.4e-56, Sum P(3) = 1.4e-56
Identities = 42/89 (47%), Positives = 57/89 (64%)
Query: 720 WNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVM 779
W + +I F + R G +NL +ADTVI YDSDWNP D QA RAHRIGQ +V
Sbjct: 1298 WQTNPEIFIFMLSTRAGGLG--LNLTSADTVIFYDSDWNPTIDSQAMDRAHRIGQTKQVK 1355
Query: 780 IYRFVTRNSVEERVTQVAKRKMMLTHLVV 808
++R VTRN++E+++ + AK K + LVV
Sbjct: 1356 VFRLVTRNTIEQKILERAKEKEEIQKLVV 1384
Score = 38 (18.4 bits), Expect = 6.5e-64, Sum P(3) = 6.5e-64
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 225 EKPTTDLRKKYEKQ 238
E+ DL+KK+EK+
Sbjct: 509 ERLERDLKKKHEKE 522
>UNIPROTKB|E2QW28 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 OMA:ETFYTAI
GeneTree:ENSGT00550000075106 EMBL:AAEX03015428
Ensembl:ENSCAFT00000012889 Uniprot:E2QW28
Length = 839
Score = 415 (151.1 bits), Expect = 8.6e-64, Sum P(3) = 8.6e-64
Identities = 134/424 (31%), Positives = 202/424 (47%)
Query: 113 MARLNRHNINDEELEKKYYRYGIKPEWLIANRVINSKTLRDGSTIYLVKWR---DLPYDK 169
+ ++ + + +++ ++K R K E L + NS + + + K R D Y+
Sbjct: 83 LTKMEQQQLEEQKKKEKLER---KKETLKVTKGKNSIGASEENPVVTRKKRGREDESYNI 139
Query: 170 ATWEDENEDIPGLKESIEFYNXXXXXXXXXXXXXELQEDEDGASGSKPR--RYTPPPEKP 227
A + E + K++ + N +LQ+++D S K R + K
Sbjct: 140 AEVMSKEEILSVAKKNKK-ENEQKESSSSNLCVEDLQKNKDSNSIIKDRLSQTVRQNTKF 198
Query: 228 TTDLRKKYEKQP-PFLDD---TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQ 283
D +K QP PF TG + YQ+EG+ WLR W I+ ILADEMGLGKT+Q
Sbjct: 199 FFDPVRKCNGQPVPFQQPKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQ 258
Query: 284 TITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHD 343
I + + + G GPFLV PLST+ NW EF+ + PD + Y G + R L
Sbjct: 259 CIATIALMIQRG-VPGPFLVCGPLSTLPNWMAEFQRFTPDIPTMLYHGTQQERRKLV--- 314
Query: 344 ISWEDTANRGGKPCRIRSSTVKFH-VLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSN 402
K R T++ H V++TS+E+ D L W L+VDE HR+K+
Sbjct: 315 -----------KNIHKRKGTLQIHPVVITSFEIAMRDRNALQHCYWKYLIVDEGHRIKNM 363
Query: 403 QSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEF------- 455
+ + + L ++ NKLLLTGTP P+ F+DL SF++ F
Sbjct: 364 KCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNFLLPDVFDDLKSFESWFDITSLSE 423
Query: 456 -AD--ISKE-EQ--VKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKY 509
A+ I+KE EQ + LH +L P +LRRLK+DV +P K E +V LS Q+ +Y
Sbjct: 424 TAEDIIAKEREQNVLHMLHQILTPFLLRRLKSDVALEVPPKREVVVYAPLSKKQEIFYTA 483
Query: 510 ILTR 513
I+ R
Sbjct: 484 IVNR 487
Score = 283 (104.7 bits), Expect = 8.6e-64, Sum P(3) = 8.6e-64
Identities = 56/109 (51%), Positives = 75/109 (68%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MT+MLDIL DY + + R+DG+++ S R++++ FN F+FL+STR+GGL
Sbjct: 622 FSQMTRMLDILMDYCHFRNFNFSRLDGSMSYSEREKNMHSFNTD-PDVFIFLVSTRAGGL 680
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYI--NLATADTV 750
GINL ADTVIIYDSDWNP +D+QA R HRIGQ + L TA+T+
Sbjct: 681 GINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTI 729
Score = 207 (77.9 bits), Expect = 7.7e-56, Sum P(3) = 7.7e-56
Identities = 46/109 (42%), Positives = 64/109 (58%)
Query: 720 WNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVM 779
+N D+ F + R G INL ADTVIIYDSDWNP +D+QA R HRIGQ V+
Sbjct: 662 FNTDPDVFIFLVSTRAGGLG--INLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVV 719
Query: 780 IYRFVTRNSVEERVTQVAKRKMMLTHLVVRPG--MGGKQA-NFTKQELD 825
+YR VT N++++++ + A K L L++ GG+ N +K LD
Sbjct: 720 VYRLVTANTIDQKIVERAAAKRKLEKLIIHKNHFKGGQSGLNQSKNFLD 768
Score = 80 (33.2 bits), Expect = 8.6e-64, Sum P(3) = 8.6e-64
Identities = 14/19 (73%), Positives = 16/19 (84%)
Query: 527 VSLLNIMMDLKKCCNHPYL 545
+ L NIMM L+KCCNHPYL
Sbjct: 559 LKLQNIMMLLRKCCNHPYL 577
Score = 56 (24.8 bits), Expect = 3.4e-36, Sum P(2) = 3.4e-36
Identities = 13/42 (30%), Positives = 25/42 (59%)
Query: 942 NQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRL 983
N+LE+L+S M+ +V R A + PV +++ ++I+ L
Sbjct: 527 NELEKLISQMQPEVDRERAVVETNIPVESEVNLKLQNIMMLL 568
>TAIR|locus:2173644 [details] [associations]
symbol:CHR1 "chromatin remodeling 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IMP]
[GO:0044030 "regulation of DNA methylation" evidence=IMP]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=IMP] [GO:0000786 "nucleosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IMP] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0090241 "negative regulation of
histone H4 acetylation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006344 "maintenance of chromatin silencing"
evidence=IMP] [GO:0009294 "DNA mediated transformation"
evidence=IMP] [GO:0032197 "transposition, RNA-mediated"
evidence=IMP] [GO:0006342 "chromatin silencing" evidence=RCA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=IMP;RCA] [GO:0008283 "cell proliferation" evidence=RCA]
[GO:0016246 "RNA interference" evidence=RCA] [GO:0016572 "histone
phosphorylation" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0051567 "histone H3-K9 methylation"
evidence=RCA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0006351 GO:GO:0004003 GO:GO:0006349 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0009294
EMBL:AB018119 GO:GO:0000786 GO:GO:0051574 GO:GO:0044030
GO:GO:0090241 GO:GO:0032197 EMBL:AF143940 EMBL:AY099638
EMBL:BT002161 EMBL:AY699010 EMBL:AY699011 IPI:IPI00524705
RefSeq:NP_201476.1 UniGene:At.28851 ProteinModelPortal:Q9XFH4
SMR:Q9XFH4 STRING:Q9XFH4 PaxDb:Q9XFH4 PRIDE:Q9XFH4
EnsemblPlants:AT5G66750.1 GeneID:836808 KEGG:ath:AT5G66750
TAIR:At5g66750 HOGENOM:HOG000172362 InParanoid:Q9XFH4 OMA:ETFYTAI
PhylomeDB:Q9XFH4 ProtClustDB:CLSN2686877 Genevestigator:Q9XFH4
GO:GO:0006344 GO:GO:0006346 Uniprot:Q9XFH4
Length = 764
Score = 462 (167.7 bits), Expect = 9.7e-63, Sum P(2) = 9.7e-63
Identities = 125/347 (36%), Positives = 181/347 (52%)
Query: 245 TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVS 304
TG QL +YQL+G+ WL W ++ ILAD+MGLGKTIQTI FL L G GP+LV
Sbjct: 198 TGGQLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHLKGNG-LDGPYLVI 256
Query: 305 APLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTV 364
APLST+ NW E + P + Y GDK+ R LR R P ++
Sbjct: 257 APLSTLSNWFNEIARFTPSINAIIYHGDKNQRDELR-----------RKHMP---KTVGP 302
Query: 365 KFHVLLTSYELITNDVA-LLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTG 423
KF +++TSYE+ ND +L W +V+DE HRLK+++ K + L + NKLLLTG
Sbjct: 303 KFPIVITSYEVAMNDAKRILRHYPWKYVVIDEGHRLKNHKCKLLRELKHLKMDNKLLLTG 362
Query: 424 TPXXXXXXXXXXXXXXXTPEKFNDLTSFQA--EFAD-----ISKEEQVKR-------LHD 469
TP P+ F F++ +F++ +KEE+ KR LH
Sbjct: 363 TPLQNNLSELWSLLNFILPDIFTSHDEFESWFDFSEKNKNEATKEEEEKRRAQVVSKLHG 422
Query: 470 LLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEA-LNP---KGGGQ 525
+L P +LRR+K DV ++P K E I+ ++ QKK+ ++++ EA L +G G
Sbjct: 423 ILRPFILRRMKCDVELSLPRKKEIIMYATMTDHQKKFQEHLVNNTLEAHLGENAIRGQGW 482
Query: 526 QVSLLNIMMDLKKCCNHP----------YLFPAAAEEAPVQGGQYEI 562
+ L N+++ L+K CNHP YL+P EE Q G++ +
Sbjct: 483 KGKLNNLVIQLRKNCNHPDLLQGQIDGSYLYPPV-EEIVGQCGKFRL 528
Score = 254 (94.5 bits), Expect = 9.7e-63, Sum P(2) = 9.7e-63
Identities = 52/109 (47%), Positives = 70/109 (64%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F TK+LDI++ Y +G++ RIDG++ R+ I F+ +S +FLLSTR+GGL
Sbjct: 546 FSQWTKLLDIMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSCSIFLLSTRAGGL 605
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKY--INLATADTV 750
GINL ADT I+YDSDWNP D+QA R HRIGQ L+TA ++
Sbjct: 606 GINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSI 654
Score = 197 (74.4 bits), Expect = 9.7e-57, Sum P(2) = 9.7e-57
Identities = 42/89 (47%), Positives = 54/89 (60%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INL ADT I+YDSDWNP D+QA R HRIGQ V +YR T S+E RV + A K+
Sbjct: 607 INLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSIETRVLKRAYSKL 666
Query: 802 MLTHLVVRPGMGGKQA--NFTKQELDDIL 828
L H+V+ G ++ + T E +DIL
Sbjct: 667 KLEHVVIGQGQFHQERAKSSTPLEEEDIL 695
>UNIPROTKB|Q9NRZ9 [details] [associations]
symbol:HELLS "Lymphoid-specific helicase" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0001655 "urogenital system development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005721
"centromeric heterochromatin" evidence=ISS] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISS]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS]
[GO:0031508 "centromeric heterochromatin assembly" evidence=ISS]
[GO:0000775 "chromosome, centromeric region" evidence=ISS]
[GO:0046651 "lymphocyte proliferation" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0005634 GO:GO:0051301 GO:GO:0007067 GO:GO:0003677
EMBL:CH471066 GO:GO:0006351 GO:GO:0003682 GO:GO:0001655
GO:GO:0004386 GO:GO:0005721 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031508
GO:GO:0010216 GO:GO:0006346 GO:GO:0046651 EMBL:AF155827
EMBL:AB102717 EMBL:AB102718 EMBL:AB102719 EMBL:AB102720
EMBL:AB102721 EMBL:AB102722 EMBL:AK314485 EMBL:AB113249
EMBL:BX538033 EMBL:AL138759 EMBL:BC015477 EMBL:BC029381
EMBL:BC030963 EMBL:BC031004 EMBL:AY007108 EMBL:AB074174
IPI:IPI00010590 IPI:IPI00807418 IPI:IPI00807455 IPI:IPI00807553
IPI:IPI00807574 IPI:IPI00807597 IPI:IPI00807667 IPI:IPI00807698
IPI:IPI00807726 RefSeq:NP_060533.2 UniGene:Hs.655830
ProteinModelPortal:Q9NRZ9 SMR:Q9NRZ9 IntAct:Q9NRZ9 STRING:Q9NRZ9
PhosphoSite:Q9NRZ9 DMDM:74761670 PaxDb:Q9NRZ9 PRIDE:Q9NRZ9
DNASU:3070 Ensembl:ENST00000348459 Ensembl:ENST00000394036
Ensembl:ENST00000394044 Ensembl:ENST00000394045 GeneID:3070
KEGG:hsa:3070 UCSC:uc001kjs.3 UCSC:uc009xul.3 UCSC:uc009xum.3
CTD:3070 GeneCards:GC10P096305 H-InvDB:HIX0017337 HGNC:HGNC:4861
HPA:CAB004491 MIM:603946 neXtProt:NX_Q9NRZ9 PharmGKB:PA35054
HOVERGEN:HBG060049 OrthoDB:EOG4SN1N4 PhylomeDB:Q9NRZ9 ChiTaRS:HELLS
GenomeRNAi:3070 NextBio:12147 ArrayExpress:Q9NRZ9 Bgee:Q9NRZ9
Genevestigator:Q9NRZ9 GermOnline:ENSG00000119969 Uniprot:Q9NRZ9
Length = 838
Score = 409 (149.0 bits), Expect = 1.1e-62, Sum P(3) = 1.1e-62
Identities = 118/330 (35%), Positives = 168/330 (50%)
Query: 204 ELQEDEDGASGSKPRRYTPPPE--KPTTDLRKKYEKQP-PFLDD---TGMQLHAYQLEGI 257
+LQ+++D S K R + K D +K QP PF TG + YQ+EG+
Sbjct: 172 DLQKNKDSNSIIKDRLSETVRQNTKFFFDPVRKCNGQPVPFQQPKHFTGGVMRWYQVEGM 231
Query: 258 NWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREF 317
WLR W I+ ILADEMGLGKT+Q I + + + G GPFLV PLST+ NW EF
Sbjct: 232 EWLRMLWENGINGILADEMGLGKTVQCIATIALMIQRG-VPGPFLVCGPLSTLPNWMAEF 290
Query: 318 ETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFH-VLLTSYELI 376
+ + PD + Y G ++ R L + R T++ H V++TS+E+
Sbjct: 291 KRFTPDIPTMLYHGTQEERQKLVRNIYK--------------RKGTLQIHPVVITSFEIA 336
Query: 377 TNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXX 436
D L W L+VDE HR+K+ + + + L ++ NKLLLTGTP
Sbjct: 337 MRDRNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSL 396
Query: 437 XXXXTPEKFNDLTSFQAEF--------AD--ISKE-EQ--VKRLHDLLGPHMLRRLKADV 483
P+ F+DL SF++ F A+ I+KE EQ + LH +L P +LRRLK+DV
Sbjct: 397 LNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQNVLHMLHQILTPFLLRRLKSDV 456
Query: 484 LKNMPSKSEFIVRVELSPMQKKYYKYILTR 513
+P K E +V LS Q+ +Y I+ R
Sbjct: 457 ALEVPPKREVVVYAPLSKKQEIFYTAIVNR 486
Score = 279 (103.3 bits), Expect = 1.1e-62, Sum P(3) = 1.1e-62
Identities = 56/109 (51%), Positives = 74/109 (67%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MT MLDIL DY + + R+DG+++ S R++++ FN F+FL+STR+GGL
Sbjct: 621 FSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTD-PEVFIFLVSTRAGGL 679
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYI--NLATADTV 750
GINL ADTVIIYDSDWNP +D+QA R HRIGQ + L TA+T+
Sbjct: 680 GINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTI 728
Score = 207 (77.9 bits), Expect = 3.8e-55, Sum P(3) = 3.8e-55
Identities = 41/87 (47%), Positives = 56/87 (64%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INL ADTVIIYDSDWNP +D+QA R HRIGQ V++YR VT N++++++ + A K
Sbjct: 681 INLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKR 740
Query: 802 MLTHLVVRPG--MGGKQA-NFTKQELD 825
L L++ GG+ N +K LD
Sbjct: 741 KLEKLIIHKNHFKGGQSGLNLSKNFLD 767
Score = 80 (33.2 bits), Expect = 1.1e-62, Sum P(3) = 1.1e-62
Identities = 14/19 (73%), Positives = 16/19 (84%)
Query: 527 VSLLNIMMDLKKCCNHPYL 545
+ L NIMM L+KCCNHPYL
Sbjct: 558 LKLQNIMMLLRKCCNHPYL 576
Score = 50 (22.7 bits), Expect = 6.8e-35, Sum P(2) = 6.8e-35
Identities = 12/42 (28%), Positives = 25/42 (59%)
Query: 942 NQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRL 983
N+LE+L+S ++ +V R A + PV +++ ++I+ L
Sbjct: 526 NELEKLISQIQPEVDRERAVVEVNIPVESEVNLKLQNIMMLL 567
Score = 39 (18.8 bits), Expect = 5.1e-23, Sum P(3) = 5.1e-23
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 477 RRLKADVLKNMPSKSEFIV-RVELSPMQKKYYKYILTRNFEALNPKGGGQQV 527
RRL+ +L+ S+F++ ++E ++++ K L R E+L K G +
Sbjct: 66 RRLQ-HLLEKSNIYSKFLLTKMEQQQLEEQKKKEKLERKKESLKVKKGKNSI 116
>DICTYBASE|DDB_G0292358 [details] [associations]
symbol:ino80 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0031011 "Ino80 complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
dictyBase:DDB_G0292358 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0003677 GO:GO:0006281 GO:GO:0016887 GO:GO:0006338
GO:GO:0006366 GO:GO:0031011 GO:GO:0004386 EMBL:AAFI02000189
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11665 RefSeq:XP_629681.1 ProteinModelPortal:Q54DG0
STRING:Q54DG0 PRIDE:Q54DG0 EnsemblProtists:DDB0233012
GeneID:8628597 KEGG:ddi:DDB_G0292358 InParanoid:Q54DG0 OMA:MINILED
ProtClustDB:CLSZ2497087 Uniprot:Q54DG0
Length = 2129
Score = 489 (177.2 bits), Expect = 1.7e-62, Sum P(2) = 1.7e-62
Identities = 128/348 (36%), Positives = 174/348 (50%)
Query: 223 PPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTI 282
PP T D K QP L+ L YQL+G+ W+ + Q I+ ILADEMGLGKTI
Sbjct: 1143 PPGFSTADTLK----QPTILN---ADLKPYQLKGMTWIVNLYDQGINGILADEMGLGKTI 1195
Query: 283 QTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDH 342
Q+I L L +E + GPFL+ P ST+ NW+ EF + P F V+ Y G + R +R +
Sbjct: 1196 QSIAVLAHLAEEKNIWGPFLIVTPKSTLHNWKNEFAKFVPAFKVIPYWGTQQQRTTIRKY 1255
Query: 343 DISWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSN 402
W P ++ FHVL+TSY +I D + W +V+DEAH +KS+
Sbjct: 1256 ---WN--------PKKLYHRNSPFHVLITSYNVIVRDEKYFHRLRWQYMVLDEAHAIKSS 1304
Query: 403 QSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFA-DISK- 460
S +K L ++ +N+LLLTGTP P F+ F F+ DI
Sbjct: 1305 ASNRWKTLMSFNCRNRLLLTGTPIQNSMAELWALLHFIMPTFFDSHDEFAEWFSKDIENH 1364
Query: 461 --------EEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILT 512
E Q+ RLH +L P MLRR+K DV MPSK+E V L+ QKK Y+ I +
Sbjct: 1365 AMSQGGLNEHQLNRLHMILKPFMLRRIKRDVENEMPSKTEVEVYCNLTHRQKKLYQSIRS 1424
Query: 513 RNFEALNPKGG------GQQVSLLNIMMDLKKCCNHPYLFPAAAEEAP 554
N GG G +L+N +M +K CNHP F + E+P
Sbjct: 1425 -NISITELLGGASFSEQGSMKALMNFVMQFRKVCNHPETFKRSECESP 1471
Score = 243 (90.6 bits), Expect = 1.7e-62, Sum P(2) = 1.7e-62
Identities = 53/109 (48%), Positives = 70/109 (64%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
+ TKM++ILED++ YKY R+DG+ R++ +D F + S F FLLSTR+ G+
Sbjct: 1789 YSQFTKMINILEDFMIFRKYKYLRLDGSSKLDDRRDMVDDFQSD-PSIFAFLLSTRACGI 1847
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYI--NLATADTV 750
GINL +ADTVI YDSDWNP D QA RAHR+GQ L T +T+
Sbjct: 1848 GINLTSADTVIFYDSDWNPTVDEQAQDRAHRLGQTRPVTVYRLITKNTI 1896
Score = 205 (77.2 bits), Expect = 1.7e-58, Sum P(2) = 1.7e-58
Identities = 42/87 (48%), Positives = 60/87 (68%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INL +ADTVI YDSDWNP D QA RAHR+GQ V +YR +T+N++EE++ + AK+K
Sbjct: 1849 INLTSADTVIFYDSDWNPTVDEQAQDRAHRLGQTRPVTVYRLITKNTIEEKILKRAKQKH 1908
Query: 802 MLTHLVVRPGMGGK-QANFTKQELDDI 827
+ +V+ GGK ++N +ELD +
Sbjct: 1909 QIQSIVIA---GGKFESN--PEELDQV 1930
Score = 38 (18.4 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 6/11 (54%), Positives = 7/11 (63%)
Query: 292 FKEGHCKGPFL 302
FK C+ PFL
Sbjct: 1463 FKRSECESPFL 1473
>FB|FBgn0086613 [details] [associations]
symbol:Ino80 "Ino80" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0031011 "Ino80 complex" evidence=IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0000975 "regulatory region DNA
binding" evidence=IDA] [GO:0010468 "regulation of gene expression"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0006355 GO:GO:0006281 GO:GO:0006351 GO:GO:0016887
GO:GO:0006338 GO:GO:0031011 GO:GO:0006310 GO:GO:0005700
GO:GO:0010468 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0000975 KO:K11665
EMBL:AY069786 RefSeq:NP_732413.1 UniGene:Dm.33518
ProteinModelPortal:Q9VDY1 SMR:Q9VDY1 IntAct:Q9VDY1 STRING:Q9VDY1
PaxDb:Q9VDY1 EnsemblMetazoa:FBtr0083771 GeneID:42314
KEGG:dme:Dmel_CG31212 UCSC:CG31212-RA CTD:54617 FlyBase:FBgn0086613
GeneTree:ENSGT00680000100052 InParanoid:Q9VDY1 OMA:NTMAEVR
OrthoDB:EOG4SQVBH PhylomeDB:Q9VDY1 ChiTaRS:INO80 GenomeRNAi:42314
NextBio:828189 Bgee:Q9VDY1 Uniprot:Q9VDY1
Length = 1638
Score = 472 (171.2 bits), Expect = 1.9e-62, Sum P(2) = 1.9e-62
Identities = 132/386 (34%), Positives = 188/386 (48%)
Query: 206 QEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWG 265
+E+E+ A S P P DL QP T L YQ++G+ WL +
Sbjct: 501 KEEEEQAQESV-EDIKPEPRPEMKDL-----PQPKMFKGT---LKGYQIKGMTWLANIYD 551
Query: 266 QNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFY 325
Q I ILADEMGLGKT+Q+I FL + + GPFLV +P ST+ NW++E + PDF
Sbjct: 552 QGISGILADEMGLGKTVQSIAFLCHIAEHYGVWGPFLVISPASTLHNWQQEMSRFVPDFK 611
Query: 326 VVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGS 385
VV Y G R +LR W+ K R ++ FHV++TSY+L+ +D
Sbjct: 612 VVPYWGSPAERKILRQF---WDQ------KHLHTRDAS--FHVVITSYQLVVSDYKYFNR 660
Query: 386 IEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKF 445
I+W +V+DEA +KS S+ +K L G+S +N+LLL+GTP P F
Sbjct: 661 IKWQYMVLDEAQAIKSAASQRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPTLF 720
Query: 446 NDLTSFQAEFA-DISK---------EEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIV 495
+ F F+ DI E+Q+ RLH +L P MLRR+K DV + K E +V
Sbjct: 721 DSHDEFNEWFSKDIESHAENKTGIDEKQISRLHMILKPFMLRRIKKDVENELSDKIEIMV 780
Query: 496 RVELSPMQKKYYKYILT--RNFEALNPKGGGQQVS-------LLNIMMDLKKCCNHPYLF 546
L+ QK Y+ + R + L+ G S L+N++M +K CNHP LF
Sbjct: 781 YCPLTIRQKLLYRALKQKIRIEDLLHLTSGSTTTSSSSSASNLMNLVMQFRKVCNHPELF 840
Query: 547 PAAAEEAP--VQGGQYEIQALTRAAG 570
+P ++ +Y I L G
Sbjct: 841 ERRDARSPFFMRCAEYTIPRLIHEEG 866
Score = 257 (95.5 bits), Expect = 1.9e-62, Sum P(2) = 1.9e-62
Identities = 52/94 (55%), Positives = 66/94 (70%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
+ MTKM+D+LE+Y+ ++Y R+DG+ S R++ + F A FVFLLSTR+GGL
Sbjct: 1178 YSQMTKMIDLLEEYMWHRKHRYMRLDGSSKISARRDMVADFQTR-ADIFVFLLSTRAGGL 1236
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ 737
GINL ADTVI YDSDWNP D QA RAHR+GQ
Sbjct: 1237 GINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQ 1270
Score = 200 (75.5 bits), Expect = 1.9e-56, Sum P(2) = 1.9e-56
Identities = 41/94 (43%), Positives = 56/94 (59%)
Query: 718 SDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 777
+D+ DI F + R G INL ADTVI YDSDWNP D QA RAHR+GQ +
Sbjct: 1216 ADFQTRADIFVFLLSTRAGGLG--INLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ 1273
Query: 778 VMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPG 811
V +YR + + ++EER+ Q A+ K + +V+ G
Sbjct: 1274 VTVYRLICKGTIEERILQRAREKSEIQRMVISGG 1307
Score = 45 (20.9 bits), Expect = 8.9e-17, Sum P(2) = 8.9e-17
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 334 DCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYE 374
D +V R+HD+ D ++ G R++ S+ + LL S E
Sbjct: 54 DEHVVKREHDVQDSDDSSTVGV-VRMKQSSKRKSRLLASKE 93
>MGI|MGI:106209 [details] [associations]
symbol:Hells "helicase, lymphoid specific" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IDA]
[GO:0001655 "urogenital system development" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005721 "centromeric heterochromatin"
evidence=IDA] [GO:0006306 "DNA methylation" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IMP] [GO:0010216 "maintenance of DNA
methylation" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0030098 "lymphocyte differentiation"
evidence=TAS] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 MGI:MGI:106209 GO:GO:0005524
GO:GO:0005634 GO:GO:0043066 GO:GO:0051301 GO:GO:0007067
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0001655
GO:GO:0004386 GO:GO:0005721 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031508
GO:GO:0010216 HOGENOM:HOG000172362 OMA:ETFYTAI GO:GO:0006346
GO:GO:0030098 GO:GO:0046651 CTD:3070 HOVERGEN:HBG060049
OrthoDB:EOG4SN1N4 EMBL:U25691 EMBL:AF155210 EMBL:AK013266
EMBL:AK147126 EMBL:BC020056 EMBL:BC100394 IPI:IPI00121431
IPI:IPI00808497 PIR:JC4666 RefSeq:NP_032260.2 UniGene:Mm.392920
UniGene:Mm.486446 UniGene:Mm.57223 ProteinModelPortal:Q60848
SMR:Q60848 DIP:DIP-43735N IntAct:Q60848 MINT:MINT-2521001
STRING:Q60848 PhosphoSite:Q60848 PaxDb:Q60848 PRIDE:Q60848
DNASU:15201 Ensembl:ENSMUST00000025965 GeneID:15201 KEGG:mmu:15201
UCSC:uc008hjt.1 GeneTree:ENSGT00550000075106 InParanoid:Q60848
NextBio:287739 Bgee:Q60848 CleanEx:MM_HELLS Genevestigator:Q60848
GermOnline:ENSMUSG00000025001 Uniprot:Q60848
Length = 821
Score = 406 (148.0 bits), Expect = 5.4e-62, Sum P(3) = 5.4e-62
Identities = 116/330 (35%), Positives = 167/330 (50%)
Query: 204 ELQEDEDGASGSKPR--RYTPPPEKPTTDLRKKYEKQP-PFLDD---TGMQLHAYQLEGI 257
++Q+++D S K R + K D +K QP PF TG + YQ+EG+
Sbjct: 155 DIQKNKDSNSMIKDRLSQTVRQNSKFFFDPVRKCNGQPVPFQQPKHFTGGVMRWYQVEGM 214
Query: 258 NWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREF 317
WLR W I+ ILADEMGLGKT+Q I + + + G GPFLV PLST+ NW EF
Sbjct: 215 EWLRMLWENGINGILADEMGLGKTVQCIATIALMIQRG-VPGPFLVCGPLSTLPNWMAEF 273
Query: 318 ETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFH-VLLTSYELI 376
+ + P+ + Y G ++ R L K R T++ H V++TS+E+
Sbjct: 274 KRFTPEIPTLLYHGTREDRRKLV--------------KNIHKRQGTLQIHPVVVTSFEIA 319
Query: 377 TNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXX 436
D L W L+VDE HR+K+ + + + L ++ NKLLLTGTP
Sbjct: 320 MRDQNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSL 379
Query: 437 XXXXTPEKFNDLTSFQAEF--------AD--ISKE-EQ--VKRLHDLLGPHMLRRLKADV 483
P+ F+DL SF++ F A+ I+KE EQ + LH +L P +LRRLK+DV
Sbjct: 380 LNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQNVLHMLHQILTPFLLRRLKSDV 439
Query: 484 LKNMPSKSEFIVRVELSPMQKKYYKYILTR 513
+P K E +V L Q+ +Y I+ R
Sbjct: 440 ALEVPPKREVVVYAPLCNKQEIFYTAIVNR 469
Score = 277 (102.6 bits), Expect = 5.4e-62, Sum P(3) = 5.4e-62
Identities = 60/122 (49%), Positives = 80/122 (65%)
Query: 635 IPGLKES----IEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGAS 690
+P LK+ + F MT MLDIL DY + + R+DG+++ S R+++I FN
Sbjct: 591 LPELKKRGHKVLVFSQMTSMLDILMDYCHLRNFIFSRLDGSMSYSEREKNIYSFNTD-PD 649
Query: 691 QFVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYI--NLATAD 748
F+FL+STR+GGLGINL ADTVIIYDSDWNP +D+QA R HRIGQ + L TA+
Sbjct: 650 VFLFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTAN 709
Query: 749 TV 750
T+
Sbjct: 710 TI 711
Score = 204 (76.9 bits), Expect = 2.3e-54, Sum P(3) = 2.3e-54
Identities = 47/114 (41%), Positives = 67/114 (58%)
Query: 715 IYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ 774
IY + +P D+ F + R G INL ADTVIIYDSDWNP +D+QA R HRIGQ
Sbjct: 641 IYSFNTDP--DVFLFLVSTRAGGLG--INLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQ 696
Query: 775 QNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPG--MGGKQA-NFTKQELD 825
V++YR VT N++++++ + A K L L++ GG+ + +K LD
Sbjct: 697 TKPVVVYRLVTANTIDQKIVERAAAKRKLEKLIIHKNHFKGGQSGLSQSKNFLD 750
Score = 78 (32.5 bits), Expect = 5.4e-62, Sum P(3) = 5.4e-62
Identities = 13/19 (68%), Positives = 16/19 (84%)
Query: 527 VSLLNIMMDLKKCCNHPYL 545
+ L NIMM L+KCCNHPY+
Sbjct: 541 LKLRNIMMLLRKCCNHPYM 559
Score = 46 (21.3 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 10/42 (23%), Positives = 25/42 (59%)
Query: 942 NQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRL 983
++LE+L+S ++ +V+R + P+ +++ R+I+ L
Sbjct: 509 SELEKLISQIQPEVNRERTVVEGNIPIESEVNLKLRNIMMLL 550
>UNIPROTKB|F1S594 [details] [associations]
symbol:LOC100622433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
GeneTree:ENSGT00550000074659 EMBL:FP102365
Ensembl:ENSSSCT00000014884 OMA:KSSGHER Uniprot:F1S594
Length = 866
Score = 311 (114.5 bits), Expect = 6.9e-62, Sum P(4) = 6.9e-62
Identities = 67/147 (45%), Positives = 92/147 (62%)
Query: 610 GSTIYLVKWRDLPYDKATWEDENEDIPGLKES----IEFYNMTKMLDILEDYLDGEGYKY 665
G T +V+ DL +E + +P L+ + + F MT ++ I+EDY G+KY
Sbjct: 316 GFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKY 375
Query: 666 ERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWNPHND 725
R+DG R + FN PG+ F+FLLSTR+GGLG+NL +ADTVII+DSDWNPH D
Sbjct: 376 LRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQD 435
Query: 726 IQAFSRAHRIGQQN--KYINLATADTV 750
+QA RAHRIGQQN + + L T ++V
Sbjct: 436 LQAQDRAHRIGQQNEVRVLRLCTVNSV 462
Score = 240 (89.5 bits), Expect = 6.9e-62, Sum P(4) = 6.9e-62
Identities = 60/175 (34%), Positives = 96/175 (54%)
Query: 350 ANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKF 409
A R P ++RS KF+VLLT+YE I D +L I W ++VDE HR+K++ K +
Sbjct: 92 ARRAFVP-QLRSG--KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQV 148
Query: 410 LSG-YSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQ----AEFA------DI 458
L+ Y +LLLTGTP P F ++F+ A FA D+
Sbjct: 149 LNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDL 208
Query: 459 SKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYI 510
++EE + +RLH +L P +LRRLK +V +P K E++++ ++S +Q+ Y+++
Sbjct: 209 NEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHM 263
Score = 220 (82.5 bits), Expect = 6.9e-62, Sum P(4) = 6.9e-62
Identities = 42/88 (47%), Positives = 54/88 (61%)
Query: 249 LHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLS 308
L YQ++G+ WL + N++ ILADEMGLGKTIQTI + L + GPFL+ PLS
Sbjct: 6 LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLS 65
Query: 309 TIINWEREFETWAPDFYVVTYVGDKDCR 336
T+ NW EF+ WAP V+Y G R
Sbjct: 66 TLSNWAYEFDKWAPSVVKVSYKGSPAAR 93
Score = 219 (82.2 bits), Expect = 1.1e-51, Sum P(4) = 1.1e-51
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL +ADTVII+DSDWNPH D+QA RAHRIGQQN+V + R T NSVEE++ AK K+
Sbjct: 415 LNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKL 474
Query: 802 MLTHLVVRPGM 812
+ V++ GM
Sbjct: 475 NVDQKVIQAGM 485
Score = 190 (71.9 bits), Expect = 1.1e-56, Sum P(4) = 1.1e-56
Identities = 47/139 (33%), Positives = 78/139 (56%)
Query: 445 FNDLTSFQAEFADISKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSP 501
FN + E D+++EE + +RLH +L P +LRRLK +V +P K E++++ ++S
Sbjct: 195 FNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSA 254
Query: 502 MQKKYYKY------ILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFP----AAAE 551
+Q+ Y++ +LT E + KG G +L+N +M L+K CNHPY+F + +E
Sbjct: 255 LQRVLYRHMQAKGVLLTDGSEK-DKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSE 313
Query: 552 EAPVQGGQYEIQALTRAAG 570
GG + L RA+G
Sbjct: 314 HLGFTGGIVQGLDLYRASG 332
Score = 43 (20.2 bits), Expect = 6.9e-62, Sum P(4) = 6.9e-62
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 908 TGRRSAKKKEMSKQERDRPLPP 929
T RS K + SK+++ R PP
Sbjct: 645 TSTRSRDKDDESKKQKKRGRPP 666
>TAIR|locus:2054955 [details] [associations]
symbol:ASG3 "ALTERED SEED GERMINATION 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002685
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 IPI:IPI00520375 RefSeq:NP_973689.2 UniGene:At.47803
ProteinModelPortal:F4IV45 SMR:F4IV45 PRIDE:F4IV45
EnsemblPlants:AT2G44980.2 GeneID:819106 KEGG:ath:AT2G44980
OMA:WALMHFC PhylomeDB:F4IV45 ArrayExpress:F4IV45 Uniprot:F4IV45
Length = 877
Score = 461 (167.3 bits), Expect = 7.2e-62, Sum P(3) = 7.2e-62
Identities = 123/353 (34%), Positives = 178/353 (50%)
Query: 234 KYEKQPPFLDDTGMQ--LHAYQLEGINWL--RYSWGQNIDTILADEMGLGKTIQTITFL- 288
K+ PP + G+ L +Q+EG++WL +Y G N+ + D+MGLGKT+Q I+FL
Sbjct: 34 KFSNTPPDCSEFGVTATLKPHQVEGVSWLIQKYLLGVNV-VLELDQMGLGKTLQAISFLS 92
Query: 289 YSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWED 348
Y F++G GPFLV PLS W E + P+ V+ YVGDK CR+ +R S D
Sbjct: 93 YLKFRQG-LPGPFLVLCPLSVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMRK---SMYD 148
Query: 349 TANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFK 408
+ K + F VLLT+Y++ D L I W ++DEA RLK+ S +
Sbjct: 149 HVKKSSK-----GHFLPFDVLLTTYDIALVDQDFLSQIPWQYAIIDEAQRLKNPNSVLYN 203
Query: 409 -FLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFA---------DI 458
L + I +LL+TGTP P F L F + F D+
Sbjct: 204 VLLEQFLIPRRLLITGTPIQNNLTELWALMHFCMPLVFGTLDQFLSAFKETGDGLSGLDV 263
Query: 459 SKEEQV-KRLHDLLGPHMLRRLKADVLKN----MPSKSEFIVRVELSPMQKKYYKYILTR 513
S +++ K L +LG MLRR K+ ++++ +P +E V V L +QKK Y IL +
Sbjct: 264 SNDKETYKSLKFILGAFMLRRTKSLLIESGNLVLPPLTELTVMVPLVSLQKKIYTSILRK 323
Query: 514 NFEALNP--KGGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAPVQGGQYEIQA 564
L GG SL NI++ L+K C+HPYLFP E P + G++ +QA
Sbjct: 324 ELPGLLELSSGGSNHTSLQNIVIQLRKACSHPYLFPGIEPE-PFEEGEHLVQA 375
Score = 255 (94.8 bits), Expect = 7.2e-62, Sum P(3) = 7.2e-62
Identities = 55/119 (46%), Positives = 74/119 (62%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAP----------GASQFV 693
F MT LDIL+D+++ Y YER+DG++ R +I F+A G++ FV
Sbjct: 399 FSQMTSTLDILQDFMELRRYSYERLDGSVRAEERFAAIKNFSAKTERGLDSEVDGSNAFV 458
Query: 694 FLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKY--INLATADTV 750
F++STR+GG+G+NL ADTVI Y+ DWNP D QA RAHRIGQ + INL T +V
Sbjct: 459 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQISHVLSINLVTEHSV 517
Score = 185 (70.2 bits), Expect = 1.5e-54, Sum P(3) = 1.5e-54
Identities = 38/75 (50%), Positives = 49/75 (65%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL ADTVI Y+ DWNP D QA RAHRIGQ + V+ VT +SVEE + + A+RK+
Sbjct: 470 LNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQISHVLSINLVTEHSVEEVILRRAERKL 529
Query: 802 MLTHLVVRPGMGGKQ 816
L+H VV M K+
Sbjct: 530 QLSHNVVGDNMEEKE 544
Score = 40 (19.1 bits), Expect = 7.2e-62, Sum P(3) = 7.2e-62
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 60 QTSSPKSPSQNLDFTSFLEVYHPQLLKSYMKKMN 93
++S PK PS +++ LE +L+ K N
Sbjct: 4 ESSPPKVPSTTMEYERRLEAAAEIILEKEAKFSN 37
>UNIPROTKB|I3LDG1 [details] [associations]
symbol:LOC100738357 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00560000077077 EMBL:FP236283
Ensembl:ENSSSCT00000031310 OMA:ENWRTEL Uniprot:I3LDG1
Length = 323
Score = 385 (140.6 bits), Expect = 7.4e-62, Sum P(2) = 7.4e-62
Identities = 86/207 (41%), Positives = 120/207 (57%)
Query: 375 LITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXX 434
+I D L I W+ +++DEAHRLK+ K + L ++++K+LLTGTP
Sbjct: 1 MILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELF 60
Query: 435 XXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFI 494
P +F T+F EF D+ EEQVK+L +L P MLRRLK DV KN+ K E I
Sbjct: 61 SLLNFLEPSQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETI 120
Query: 495 VRVELSPMQKKYYKYILTRNFEALNPKGGGQQ--VSLLNIMMDLKKCCNHPYLFPAAAEE 552
+ VEL+ +QKKYY+ IL +NF L KG Q +L+N MM+L+KCCNHPYL A E+
Sbjct: 121 IEVELTNIQKKYYRAILEKNFSFLT-KGANQHNMPNLINTMMELRKCCNHPYLINGAEEK 179
Query: 553 ---------APVQGGQYEIQALTRAAG 570
+P +++QA+ +AAG
Sbjct: 180 ILEDFRKTHSP-DAPDFQLQAMIQAAG 205
Score = 285 (105.4 bits), Expect = 7.4e-62, Sum P(2) = 7.4e-62
Identities = 56/97 (57%), Positives = 68/97 (70%)
Query: 635 IPGLKESIEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVF 694
I G + + F M + LDILEDYL Y YERIDG + G++RQ +IDRF P + +FVF
Sbjct: 218 IAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVF 277
Query: 695 LLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSR 731
LL TR+GGLGINL ADT II+DSDWNP ND+Q R
Sbjct: 278 LLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQVTIR 314
Score = 101 (40.6 bits), Expect = 1.7e-42, Sum P(2) = 1.7e-42
Identities = 23/47 (48%), Positives = 26/47 (55%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSR 768
P +D F R G INL ADT II+DSDWNP ND+Q R
Sbjct: 270 PDSDRFVFLLCTRAGGLG--INLTAADTCIIFDSDWNPQNDLQVTIR 314
Score = 41 (19.5 bits), Expect = 1.8e-25, Sum P(2) = 1.8e-25
Identities = 18/68 (26%), Positives = 27/68 (39%)
Query: 67 PSQNLDFTSFLEVYHPQLLKSYMKKMNNDFTXXXXXXXXXXXXXKRMARLNRHNINDE-- 124
PSQ T+FLE + + +KK+ + K +A I E
Sbjct: 68 PSQFPSETAFLEEFGDLKTEEQVKKLQS-ILKPMMLRRLKDDVEKNLAPKQETIIEVELT 126
Query: 125 ELEKKYYR 132
++KKYYR
Sbjct: 127 NIQKKYYR 134
>UNIPROTKB|D4AA07 [details] [associations]
symbol:Smarca4 "Transcription activator BRG1" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS51194 SMART:SM00490 SMART:SM00592 RGD:621728
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OrthoDB:EOG418BMJ IPI:IPI00915110 Ensembl:ENSRNOT00000060926
ArrayExpress:D4AA07 Uniprot:D4AA07
Length = 1262
Score = 311 (114.5 bits), Expect = 9.8e-62, Sum P(4) = 9.8e-62
Identities = 67/147 (45%), Positives = 92/147 (62%)
Query: 610 GSTIYLVKWRDLPYDKATWEDENEDIPGLKES----IEFYNMTKMLDILEDYLDGEGYKY 665
G T +V+ DL +E + +P L+ + + F MT ++ I+EDY G+KY
Sbjct: 863 GFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKY 922
Query: 666 ERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWNPHND 725
R+DG R + FN PG+ F+FLLSTR+GGLG+NL +ADTVII+DSDWNPH D
Sbjct: 923 LRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQD 982
Query: 726 IQAFSRAHRIGQQN--KYINLATADTV 750
+QA RAHRIGQQN + + L T ++V
Sbjct: 983 LQAQDRAHRIGQQNEVRVLRLCTVNSV 1009
Score = 240 (89.5 bits), Expect = 9.8e-62, Sum P(4) = 9.8e-62
Identities = 60/175 (34%), Positives = 96/175 (54%)
Query: 350 ANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKF 409
A R P ++RS KF+VLLT+YE I D +L I W ++VDE HR+K++ K +
Sbjct: 639 ARRAFVP-QLRSG--KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQV 695
Query: 410 LSG-YSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQ----AEFA------DI 458
L+ Y +LLLTGTP P F ++F+ A FA D+
Sbjct: 696 LNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDL 755
Query: 459 SKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYI 510
++EE + +RLH +L P +LRRLK +V +P K E++++ ++S +Q+ Y+++
Sbjct: 756 NEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHM 810
Score = 221 (82.9 bits), Expect = 9.8e-62, Sum P(4) = 9.8e-62
Identities = 45/104 (43%), Positives = 63/104 (60%)
Query: 233 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 292
++ +KQ + + G+ L YQ++G+ WL + N++ ILADEMGLGKTIQTI + L
Sbjct: 539 ERVDKQSALMVN-GV-LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLM 596
Query: 293 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR 336
+ GPFL+ PLST+ NW EF+ WAP V+Y G R
Sbjct: 597 EHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR 640
Score = 219 (82.2 bits), Expect = 1.1e-51, Sum P(4) = 1.1e-51
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL +ADTVII+DSDWNPH D+QA RAHRIGQQN+V + R T NSVEE++ AK K+
Sbjct: 962 LNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKL 1021
Query: 802 MLTHLVVRPGM 812
+ V++ GM
Sbjct: 1022 NVDQKVIQAGM 1032
Score = 190 (71.9 bits), Expect = 1.5e-56, Sum P(4) = 1.5e-56
Identities = 47/139 (33%), Positives = 78/139 (56%)
Query: 445 FNDLTSFQAEFADISKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSP 501
FN + E D+++EE + +RLH +L P +LRRLK +V +P K E++++ ++S
Sbjct: 742 FNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSA 801
Query: 502 MQKKYYKY------ILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFP----AAAE 551
+Q+ Y++ +LT E + KG G +L+N +M L+K CNHPY+F + +E
Sbjct: 802 LQRVLYRHMQAKGVLLTDGSEK-DKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSE 860
Query: 552 EAPVQGGQYEIQALTRAAG 570
GG + L RA+G
Sbjct: 861 HLGFTGGIVQGLDLYRASG 879
Score = 51 (23.0 bits), Expect = 9.8e-62, Sum P(4) = 9.8e-62
Identities = 18/70 (25%), Positives = 29/70 (41%)
Query: 861 WVKLLRHHYEQHQ-EDVSRTLGKGKRVRKQTXXXXXXXXXXXXXXXXLTGRRSAKKKEMS 919
W+K L+ E+ E++ + + K RK+ T RS K E S
Sbjct: 1187 WLKQLKAAIEEGTLEEIEEEVRQKKSSRKRKRDSEAGSSTPT------TSTRSRDKDEES 1240
Query: 920 KQERDRPLPP 929
K+++ R PP
Sbjct: 1241 KKQKKRGRPP 1250
>UNIPROTKB|K7GT64 [details] [associations]
symbol:LOC100622433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00550000074659 EMBL:FP102365
Ensembl:ENSSSCT00000034320 Uniprot:K7GT64
Length = 980
Score = 311 (114.5 bits), Expect = 1.3e-61, Sum P(4) = 1.3e-61
Identities = 67/147 (45%), Positives = 92/147 (62%)
Query: 610 GSTIYLVKWRDLPYDKATWEDENEDIPGLKES----IEFYNMTKMLDILEDYLDGEGYKY 665
G T +V+ DL +E + +P L+ + + F MT ++ I+EDY G+KY
Sbjct: 397 GFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKY 456
Query: 666 ERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWNPHND 725
R+DG R + FN PG+ F+FLLSTR+GGLG+NL +ADTVII+DSDWNPH D
Sbjct: 457 LRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQD 516
Query: 726 IQAFSRAHRIGQQN--KYINLATADTV 750
+QA RAHRIGQQN + + L T ++V
Sbjct: 517 LQAQDRAHRIGQQNEVRVLRLCTVNSV 543
Score = 240 (89.5 bits), Expect = 1.3e-61, Sum P(4) = 1.3e-61
Identities = 60/175 (34%), Positives = 96/175 (54%)
Query: 350 ANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKF 409
A R P ++RS KF+VLLT+YE I D +L I W ++VDE HR+K++ K +
Sbjct: 173 ARRAFVP-QLRSG--KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQV 229
Query: 410 LSG-YSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQ----AEFA------DI 458
L+ Y +LLLTGTP P F ++F+ A FA D+
Sbjct: 230 LNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDL 289
Query: 459 SKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYI 510
++EE + +RLH +L P +LRRLK +V +P K E++++ ++S +Q+ Y+++
Sbjct: 290 NEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHM 344
Score = 221 (82.9 bits), Expect = 1.3e-61, Sum P(4) = 1.3e-61
Identities = 45/104 (43%), Positives = 63/104 (60%)
Query: 233 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 292
++ +KQ + + G+ L YQ++G+ WL + N++ ILADEMGLGKTIQTI + L
Sbjct: 73 ERVDKQSALMVN-GV-LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLM 130
Query: 293 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR 336
+ GPFL+ PLST+ NW EF+ WAP V+Y G R
Sbjct: 131 EHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR 174
Score = 219 (82.2 bits), Expect = 1.9e-51, Sum P(4) = 1.9e-51
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL +ADTVII+DSDWNPH D+QA RAHRIGQQN+V + R T NSVEE++ AK K+
Sbjct: 496 LNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKL 555
Query: 802 MLTHLVVRPGM 812
+ V++ GM
Sbjct: 556 NVDQKVIQAGM 566
Score = 190 (71.9 bits), Expect = 2.1e-56, Sum P(4) = 2.1e-56
Identities = 47/139 (33%), Positives = 78/139 (56%)
Query: 445 FNDLTSFQAEFADISKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSP 501
FN + E D+++EE + +RLH +L P +LRRLK +V +P K E++++ ++S
Sbjct: 276 FNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSA 335
Query: 502 MQKKYYKY------ILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFP----AAAE 551
+Q+ Y++ +LT E + KG G +L+N +M L+K CNHPY+F + +E
Sbjct: 336 LQRVLYRHMQAKGVLLTDGSEK-DKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSE 394
Query: 552 EAPVQGGQYEIQALTRAAG 570
GG + L RA+G
Sbjct: 395 HLGFTGGIVQGLDLYRASG 413
Score = 43 (20.2 bits), Expect = 1.3e-61, Sum P(4) = 1.3e-61
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 908 TGRRSAKKKEMSKQERDRPLPP 929
T RS K + SK+++ R PP
Sbjct: 759 TSTRSRDKDDESKKQKKRGRPP 780
>UNIPROTKB|F1M6Y4 [details] [associations]
symbol:Smarca4 "Transcription activator BRG1" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst
growth" evidence=IEA] [GO:0001835 "blastocyst hatching"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0005726
"perichromatin fibrils" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=IEA] [GO:0007403 "glial cell fate
determination" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0010424 "DNA methylation on cytosine
within a CG sequence" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IEA] [GO:0030902 "hindbrain development" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0048730 "epidermis morphogenesis"
evidence=IEA] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IEA] [GO:0060347 "heart trabecula formation" evidence=IEA]
[GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726
GO:GO:0035887 IPI:IPI00951882 Ensembl:ENSRNOT00000060927
ArrayExpress:F1M6Y4 Uniprot:F1M6Y4
Length = 1618
Score = 311 (114.5 bits), Expect = 3.9e-61, Sum P(4) = 3.9e-61
Identities = 67/147 (45%), Positives = 92/147 (62%)
Query: 610 GSTIYLVKWRDLPYDKATWEDENEDIPGLKES----IEFYNMTKMLDILEDYLDGEGYKY 665
G T +V+ DL +E + +P L+ + + F MT ++ I+EDY G+KY
Sbjct: 1064 GFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKY 1123
Query: 666 ERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWNPHND 725
R+DG R + FN PG+ F+FLLSTR+GGLG+NL +ADTVII+DSDWNPH D
Sbjct: 1124 LRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQD 1183
Query: 726 IQAFSRAHRIGQQN--KYINLATADTV 750
+QA RAHRIGQQN + + L T ++V
Sbjct: 1184 LQAQDRAHRIGQQNEVRVLRLCTVNSV 1210
Score = 240 (89.5 bits), Expect = 3.9e-61, Sum P(4) = 3.9e-61
Identities = 60/175 (34%), Positives = 96/175 (54%)
Query: 350 ANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKF 409
A R P ++RS KF+VLLT+YE I D +L I W ++VDE HR+K++ K +
Sbjct: 840 ARRAFVP-QLRSG--KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQV 896
Query: 410 LSG-YSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQ----AEFA------DI 458
L+ Y +LLLTGTP P F ++F+ A FA D+
Sbjct: 897 LNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDL 956
Query: 459 SKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYI 510
++EE + +RLH +L P +LRRLK +V +P K E++++ ++S +Q+ Y+++
Sbjct: 957 NEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHM 1011
Score = 221 (82.9 bits), Expect = 3.9e-61, Sum P(4) = 3.9e-61
Identities = 45/104 (43%), Positives = 63/104 (60%)
Query: 233 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 292
++ +KQ + + G+ L YQ++G+ WL + N++ ILADEMGLGKTIQTI + L
Sbjct: 740 ERVDKQSALMVN-GV-LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLM 797
Query: 293 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR 336
+ GPFL+ PLST+ NW EF+ WAP V+Y G R
Sbjct: 798 EHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR 841
Score = 219 (82.2 bits), Expect = 3.9e-51, Sum P(4) = 3.9e-51
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL +ADTVII+DSDWNPH D+QA RAHRIGQQN+V + R T NSVEE++ AK K+
Sbjct: 1163 LNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKL 1222
Query: 802 MLTHLVVRPGM 812
+ V++ GM
Sbjct: 1223 NVDQKVIQAGM 1233
Score = 190 (71.9 bits), Expect = 6.2e-56, Sum P(4) = 6.2e-56
Identities = 47/139 (33%), Positives = 78/139 (56%)
Query: 445 FNDLTSFQAEFADISKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSP 501
FN + E D+++EE + +RLH +L P +LRRLK +V +P K E++++ ++S
Sbjct: 943 FNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSA 1002
Query: 502 MQKKYYKY------ILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFP----AAAE 551
+Q+ Y++ +LT E + KG G +L+N +M L+K CNHPY+F + +E
Sbjct: 1003 LQRVLYRHMQAKGVLLTDGSEK-DKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSE 1061
Query: 552 EAPVQGGQYEIQALTRAAG 570
GG + L RA+G
Sbjct: 1062 HLGFTGGIVQGLDLYRASG 1080
Score = 51 (23.0 bits), Expect = 3.9e-61, Sum P(4) = 3.9e-61
Identities = 18/70 (25%), Positives = 29/70 (41%)
Query: 861 WVKLLRHHYEQHQ-EDVSRTLGKGKRVRKQTXXXXXXXXXXXXXXXXLTGRRSAKKKEMS 919
W+K L+ E+ E++ + + K RK+ T RS K E S
Sbjct: 1355 WLKQLKAAIEEGTLEEIEEEVRQKKSSRKRKRDSEAGSSTPT------TSTRSRDKDEES 1408
Query: 920 KQERDRPLPP 929
K+++ R PP
Sbjct: 1409 KKQKKRGRPP 1418
>MGI|MGI:1915308 [details] [associations]
symbol:Chd1l "chromodomain helicase DNA binding protein
1-like" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1915308 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 GO:GO:0003677 GO:GO:0006281
GO:GO:0006974 GO:GO:0016887 GO:GO:0006338 GO:GO:0004386 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR002589 PROSITE:PS51154 CTD:9557 HOGENOM:HOG000030789
HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV OMA:TCQTIAL ChiTaRS:CHD1L
EMBL:AK014473 EMBL:AK165656 EMBL:BC052385 EMBL:BC057567
EMBL:BC062966 IPI:IPI00466859 IPI:IPI00890897 RefSeq:NP_080815.1
UniGene:Mm.41447 ProteinModelPortal:Q9CXF7 SMR:Q9CXF7
DIP:DIP-58953N STRING:Q9CXF7 PhosphoSite:Q9CXF7 PaxDb:Q9CXF7
PRIDE:Q9CXF7 Ensembl:ENSMUST00000029730 GeneID:68058 KEGG:mmu:68058
UCSC:uc008qow.1 UCSC:uc008qox.1 GeneTree:ENSGT00670000098110
InParanoid:Q9CXF7 NextBio:326336 Bgee:Q9CXF7 Genevestigator:Q9CXF7
Uniprot:Q9CXF7
Length = 900
Score = 406 (148.0 bits), Expect = 7.1e-61, Sum P(2) = 7.1e-61
Identities = 123/347 (35%), Positives = 170/347 (48%)
Query: 223 PPEKPTTDLRKKYEKQPPFLDD---TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLG 279
P E LR + Q P L TG++L +YQLEG+NWL + IL DEMGLG
Sbjct: 13 PAEHGPEPLRTRV--QEPDLQQWGLTGIRLRSYQLEGVNWLVQCFHCQNGCILGDEMGLG 70
Query: 280 KTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVL 339
KT QTI L L + +GPFLV PLS + NW+ E E +AP VTY GDK+ R L
Sbjct: 71 KTCQTIALLIYLVGRLNDEGPFLVLCPLSVLSNWKEEMERFAPGLSCVTYTGDKEERARL 130
Query: 340 RDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRL 399
+ D+ E + I F + S+ ++ D A + ++L HR
Sbjct: 131 QQ-DLRQESGFHVLLTTYEICLKDASF-LKSFSWSVLAVDEAHRLKNQSSLL-----HRT 183
Query: 400 KSNQSKFFKFL-SGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADI 458
S S F+ L +G IQN L E+ D F + DI
Sbjct: 184 LSEFSAVFRLLLTGTPIQNSL------RELYSLLCVVEPDLFCREQVED---FVQRYQDI 234
Query: 459 SKEEQ-VKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEA 517
KE + LH LL P +LRR+KA V +P K+E +V +S +QKKYYK IL ++ +A
Sbjct: 235 EKESKSASELHRLLQPFLLRRVKAQVATELPKKTEVVVYHGMSALQKKYYKAILMKDLDA 294
Query: 518 LNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAPVQGGQYEIQA 564
+ ++V L NI+ L+KC +HPYLF E P + G++ I+A
Sbjct: 295 FENETA-KKVKLQNILTQLRKCVDHPYLFDGVEPE-PFEVGEHLIEA 339
Score = 302 (111.4 bits), Expect = 7.1e-61, Sum P(2) = 7.1e-61
Identities = 66/115 (57%), Positives = 79/115 (68%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRF-NAPGASQFVFLLSTRSGG 702
F MT MLDIL+DY+D GY YER+DG++ G R +I F N P FVFLLSTR+GG
Sbjct: 363 FSQMTHMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGNQP---IFVFLLSTRAGG 419
Query: 703 LGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV--IIY 753
+G+NL ADTVI DSD+NP ND+QA +RAHRIGQ K I L DTV I+Y
Sbjct: 420 VGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVY 474
Score = 194 (73.4 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 42/94 (44%), Positives = 61/94 (64%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL ADTVI DSD+NP ND+QA +RAHRIGQ V + R + R++VEE V + A K+
Sbjct: 422 MNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKL 481
Query: 802 MLTHLVVRPGM---GGKQANFTKQ-ELDDILRFG 831
LT++V+ G G ++ + +L +IL+FG
Sbjct: 482 QLTNMVIEGGHFTPGAQKPSAEADFQLSEILKFG 515
>POMBASE|SPAC29B12.01 [details] [associations]
symbol:ino80 "SNF2 family helicase Ino80" species:4896
"Schizosaccharomyces pombe" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=ISO] [GO:0006338 "chromatin remodeling" evidence=IPI]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IDA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 PomBase:SPAC29B12.01 GO:GO:0005524
EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006281 GO:GO:0006351 GO:GO:0016568 GO:GO:0031011 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043140 KO:K11665 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
RefSeq:NP_001018299.1 ProteinModelPortal:O14148 STRING:O14148
EnsemblFungi:SPAC29B12.01.1 GeneID:3361566 KEGG:spo:SPAC29B12.01
OMA:INDHNSA NextBio:20811604 Uniprot:O14148
Length = 1604
Score = 442 (160.7 bits), Expect = 7.8e-61, Sum P(2) = 7.8e-61
Identities = 122/350 (34%), Positives = 178/350 (50%)
Query: 225 EKPTTDLRKKYE-KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQ 283
+ PT L +E KQP L +L YQL+G+NWL + Q I+ ILADEMGLGKT+Q
Sbjct: 822 QNPT--LVNAFEVKQPKMLM---CKLKEYQLKGLNWLANLYEQGINGILADEMGLGKTVQ 876
Query: 284 TITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHD 343
+I+ + L + + GPFLV AP ST+ NW++E + P + Y G R +LR
Sbjct: 877 SISVMAYLAETHNIWGPFLVIAPASTLHNWQQEITRFVPKLKCIPYWGSTKDRKILRKF- 935
Query: 344 ISWEDTANRGGKPCRIRSS---TVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLK 400
W CR + FHV++TSY+L+ D S++W +++DEA +K
Sbjct: 936 --W----------CRKNMTYDENSPFHVVVTSYQLVVLDAQYFQSVKWQYMILDEAQAIK 983
Query: 401 SNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFA-DIS 459
S+ S +K L + +N+LLLTGTP P F+ F F+ DI
Sbjct: 984 SSSSSRWKSLLAFKCRNRLLLTGTPIQNTMQELWALLHFIMPSLFDSHNEFSEWFSKDIE 1043
Query: 460 K---------EEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYI 510
E+Q+KRLH +L P MLRR+K +V + K E V +L+ QK Y+ +
Sbjct: 1044 SHAQSNTQLNEQQLKRLHMILKPFMLRRVKKNVQSELGEKIEKEVYCDLTQRQKILYQAL 1103
Query: 511 LTR-NFEALNPK---GGGQQV-SLLNIMMDLKKCCNHPYLFPAAAEEAPV 555
+ + L K GG V S++N++M +K CNHP LF +P+
Sbjct: 1104 RRQISIAELLEKAILGGDDTVASIMNLVMQFRKVCNHPDLFEREDVRSPL 1153
Score = 273 (101.2 bits), Expect = 7.8e-61, Sum P(2) = 7.8e-61
Identities = 53/97 (54%), Positives = 68/97 (70%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
++ MT+M+D++E+YL YKY R+DG+ S R++ + + FVFLLSTR+GGL
Sbjct: 1451 YFQMTRMIDLMEEYLTFRQYKYLRLDGSSKISQRRDMVTEWQTR-PELFVFLLSTRAGGL 1509
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 740
GINL ADTVI YDSDWNP D QA RAHRIGQQ +
Sbjct: 1510 GINLTAADTVIFYDSDWNPSIDSQAMDRAHRIGQQKQ 1546
Score = 217 (81.4 bits), Expect = 5.9e-55, Sum P(3) = 5.9e-55
Identities = 44/94 (46%), Positives = 58/94 (61%)
Query: 718 SDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 777
++W ++ F + R G INL ADTVI YDSDWNP D QA RAHRIGQQ +
Sbjct: 1489 TEWQTRPELFVFLLSTRAGGLG--INLTAADTVIFYDSDWNPSIDSQAMDRAHRIGQQKQ 1546
Query: 778 VMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPG 811
V +YRF+TR ++EER+ AK K + +V+ G
Sbjct: 1547 VTVYRFITRGTIEERIVIRAKEKEEVQKVVISGG 1580
Score = 49 (22.3 bits), Expect = 5.9e-55, Sum P(3) = 5.9e-55
Identities = 19/66 (28%), Positives = 29/66 (43%)
Query: 634 DIPG--LKESIEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQ 691
D+ G KE FY++T +L+ + LD +D + ID + PG+ Q
Sbjct: 1304 DVLGSDFKEDSPFYHLTHVLEESDSQLD-----LTLLDSVLVQRASAPPIDIY-CPGSRQ 1357
Query: 692 FVFLLS 697
F L S
Sbjct: 1358 FTVLQS 1363
>MGI|MGI:88192 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0000792 "heterochromatin"
evidence=IDA] [GO:0000902 "cell morphogenesis" evidence=IMP]
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=IDA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=ISO] [GO:0001570
"vasculogenesis" evidence=IMP] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0001832 "blastocyst growth"
evidence=IMP] [GO:0001835 "blastocyst hatching" evidence=IMP]
[GO:0001889 "liver development" evidence=IMP] [GO:0002039 "p53
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003713 "transcription
coactivator activity" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin" evidence=IDA]
[GO:0005726 "perichromatin fibrils" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0006337 "nucleosome disassembly" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=ISO;IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0007403 "glial cell fate determination"
evidence=IMP] [GO:0007507 "heart development" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IMP] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA;TAS]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IMP;TAS] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IDA] [GO:0030198 "extracellular
matrix organization" evidence=IMP] [GO:0030216 "keratinocyte
differentiation" evidence=IMP] [GO:0030308 "negative regulation of
cell growth" evidence=ISO] [GO:0030900 "forebrain development"
evidence=IMP] [GO:0030902 "hindbrain development" evidence=IMP]
[GO:0030957 "Tat protein binding" evidence=ISO] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IMP] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IMP] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO] [GO:0043388
"positive regulation of DNA binding" evidence=IGI] [GO:0043923
"positive regulation by host of viral transcription" evidence=ISO]
[GO:0043966 "histone H3 acetylation" evidence=IMP] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0048562 "embryonic
organ morphogenesis" evidence=IMP] [GO:0048730 "epidermis
morphogenesis" evidence=IMP] [GO:0050681 "androgen receptor
binding" evidence=ISO] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IMP] [GO:0060347 "heart trabecula formation" evidence=IGI]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=ISO] [GO:0070577 "histone acetyl-lysine binding"
evidence=ISO] [GO:0071564 "npBAF complex" evidence=ISO;IDA]
[GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778 "WINAC
complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 MGI:MGI:88192
GO:GO:0005524 GO:GO:0003714 GO:GO:0030216 GO:GO:0045944
GO:GO:0030198 GO:GO:0030900 GO:GO:0001889 EMBL:CH466522
GO:GO:0006351 GO:GO:0003682 GO:GO:0016887 GO:GO:0006338
GO:GO:0000122 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0000902 GO:GO:0004386 GO:GO:0001570 GO:GO:0035116
GO:GO:0005719 GO:GO:0030902 GO:GO:0048730 GO:GO:0000977
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0019827 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 KO:K11647 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0001835
GO:GO:0007403 GO:GO:0006346 GO:GO:0010424 GO:GO:0060318
GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 HOGENOM:HOG000172363
HOVERGEN:HBG056636 GO:GO:0035887 OrthoDB:EOG418BMJ CTD:6597
EMBL:AK147285 EMBL:AK160825 EMBL:AK166837 EMBL:BC079560
IPI:IPI00875789 IPI:IPI00955124 RefSeq:NP_001167549.1
RefSeq:NP_001167550.1 RefSeq:NP_035547.2 UniGene:Mm.286593
ProteinModelPortal:Q3TKT4 SMR:Q3TKT4 DIP:DIP-40650N DIP:DIP-59249N
IntAct:Q3TKT4 MINT:MINT-1958721 STRING:Q3TKT4 PhosphoSite:Q3TKT4
PaxDb:Q3TKT4 PRIDE:Q3TKT4 Ensembl:ENSMUST00000034707
Ensembl:ENSMUST00000098948 Ensembl:ENSMUST00000174008 GeneID:20586
KEGG:mmu:20586 UCSC:uc009omd.2 UCSC:uc009ome.2 InParanoid:Q3TUD7
NextBio:298883 Bgee:Q3TKT4 Genevestigator:Q3TKT4 Uniprot:Q3TKT4
Length = 1613
Score = 311 (114.5 bits), Expect = 7.9e-61, Sum P(4) = 7.9e-61
Identities = 67/147 (45%), Positives = 92/147 (62%)
Query: 610 GSTIYLVKWRDLPYDKATWEDENEDIPGLKES----IEFYNMTKMLDILEDYLDGEGYKY 665
G T +V+ DL +E + +P L+ + + F MT ++ I+EDY G+KY
Sbjct: 1064 GFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKY 1123
Query: 666 ERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWNPHND 725
R+DG R + FN PG+ F+FLLSTR+GGLG+NL +ADTVII+DSDWNPH D
Sbjct: 1124 LRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQD 1183
Query: 726 IQAFSRAHRIGQQN--KYINLATADTV 750
+QA RAHRIGQQN + + L T ++V
Sbjct: 1184 LQAQDRAHRIGQQNEVRVLRLCTVNSV 1210
Score = 240 (89.5 bits), Expect = 7.9e-61, Sum P(4) = 7.9e-61
Identities = 60/175 (34%), Positives = 96/175 (54%)
Query: 350 ANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKF 409
A R P ++RS KF+VLLT+YE I D +L I W ++VDE HR+K++ K +
Sbjct: 840 ARRAFVP-QLRSG--KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQV 896
Query: 410 LSG-YSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQ----AEFA------DI 458
L+ Y +LLLTGTP P F ++F+ A FA D+
Sbjct: 897 LNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDL 956
Query: 459 SKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYI 510
++EE + +RLH +L P +LRRLK +V +P K E++++ ++S +Q+ Y+++
Sbjct: 957 NEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHM 1011
Score = 221 (82.9 bits), Expect = 7.9e-61, Sum P(4) = 7.9e-61
Identities = 45/104 (43%), Positives = 63/104 (60%)
Query: 233 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 292
++ +KQ + + G+ L YQ++G+ WL + N++ ILADEMGLGKTIQTI + L
Sbjct: 740 ERVDKQSALMVN-GV-LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLM 797
Query: 293 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR 336
+ GPFL+ PLST+ NW EF+ WAP V+Y G R
Sbjct: 798 EHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR 841
Score = 219 (82.2 bits), Expect = 8.0e-51, Sum P(4) = 8.0e-51
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL +ADTVII+DSDWNPH D+QA RAHRIGQQN+V + R T NSVEE++ AK K+
Sbjct: 1163 LNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKL 1222
Query: 802 MLTHLVVRPGM 812
+ V++ GM
Sbjct: 1223 NVDQKVIQAGM 1233
Score = 190 (71.9 bits), Expect = 1.2e-55, Sum P(4) = 1.2e-55
Identities = 47/139 (33%), Positives = 78/139 (56%)
Query: 445 FNDLTSFQAEFADISKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSP 501
FN + E D+++EE + +RLH +L P +LRRLK +V +P K E++++ ++S
Sbjct: 943 FNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSA 1002
Query: 502 MQKKYYKY------ILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFP----AAAE 551
+Q+ Y++ +LT E + KG G +L+N +M L+K CNHPY+F + +E
Sbjct: 1003 LQRVLYRHMQAKGVLLTDGSEK-DKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSE 1061
Query: 552 EAPVQGGQYEIQALTRAAG 570
GG + L RA+G
Sbjct: 1062 HLGFTGGIVQGLDLYRASG 1080
Score = 48 (22.0 bits), Expect = 7.9e-61, Sum P(4) = 7.9e-61
Identities = 19/70 (27%), Positives = 29/70 (41%)
Query: 861 WVKLLRHH-YEQHQEDVSRTLGKGKRVRKQTXXXXXXXXXXXXXXXXLTGRRSAKKKEMS 919
W+K + E+ +E+V + K R RK+ T RS K E S
Sbjct: 1355 WLKAIEEGTLEEIEEEVRQK--KSSRKRKRDSEAGSSTPT--------TSTRSRDKDEES 1404
Query: 920 KQERDRPLPP 929
K+++ R PP
Sbjct: 1405 KKQKKRGRPP 1414
>RGD|621728 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0000792
"heterochromatin" evidence=ISO] [GO:0000902 "cell morphogenesis"
evidence=ISO] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=ISO] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=ISO]
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0001701 "in utero
embryonic development" evidence=ISO] [GO:0001832 "blastocyst
growth" evidence=ISO] [GO:0001835 "blastocyst hatching"
evidence=ISO] [GO:0001889 "liver development" evidence=ISO]
[GO:0002039 "p53 binding" evidence=ISO] [GO:0003407 "neural retina
development" evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003713
"transcription coactivator activity" evidence=ISO] [GO:0003714
"transcription corepressor activity" evidence=ISO;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin"
evidence=ISO] [GO:0005726 "perichromatin fibrils" evidence=ISO]
[GO:0006337 "nucleosome disassembly" evidence=ISO;IDA] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA;ISO] [GO:0007403 "glial cell fate determination"
evidence=ISO] [GO:0007507 "heart development" evidence=ISO]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=ISO] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0019827 "stem cell
maintenance" evidence=ISO] [GO:0022008 "neurogenesis" evidence=ISO]
[GO:0030198 "extracellular matrix organization" evidence=ISO]
[GO:0030216 "keratinocyte differentiation" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0030900 "forebrain development" evidence=ISO] [GO:0030902
"hindbrain development" evidence=ISO] [GO:0030957 "Tat protein
binding" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=ISO] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=ISO] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IDA] [GO:0043388 "positive regulation of DNA
binding" evidence=ISO] [GO:0043923 "positive regulation by host of
viral transcription" evidence=ISO] [GO:0043966 "histone H3
acetylation" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0048562 "embryonic organ
morphogenesis" evidence=ISO] [GO:0048730 "epidermis morphogenesis"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0060318
"definitive erythrocyte differentiation" evidence=ISO] [GO:0060347
"heart trabecula formation" evidence=ISO] [GO:0060766 "negative
regulation of androgen receptor signaling pathway" evidence=ISO]
[GO:0070577 "histone acetyl-lysine binding" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=ISO;ISS] [GO:0071565 "nBAF
complex" evidence=ISO;ISS] [GO:0071778 "WINAC complex"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524 GO:GO:0003714
GO:GO:0007399 GO:GO:0006355 GO:GO:0032403 GO:GO:0003677
GO:GO:0006351 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0004386 GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172363
HOVERGEN:HBG056636 EMBL:AJ504723 IPI:IPI00781891 UniGene:Rn.23417
ProteinModelPortal:Q8K1P7 SMR:Q8K1P7 IntAct:Q8K1P7 STRING:Q8K1P7
PhosphoSite:Q8K1P7 PRIDE:Q8K1P7 UCSC:RGD:621728 ArrayExpress:Q8K1P7
Genevestigator:Q8K1P7 Uniprot:Q8K1P7
Length = 1613
Score = 311 (114.5 bits), Expect = 7.9e-61, Sum P(4) = 7.9e-61
Identities = 67/147 (45%), Positives = 92/147 (62%)
Query: 610 GSTIYLVKWRDLPYDKATWEDENEDIPGLKES----IEFYNMTKMLDILEDYLDGEGYKY 665
G T +V+ DL +E + +P L+ + + F MT ++ I+EDY G+KY
Sbjct: 1064 GFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKY 1123
Query: 666 ERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWNPHND 725
R+DG R + FN PG+ F+FLLSTR+GGLG+NL +ADTVII+DSDWNPH D
Sbjct: 1124 LRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQD 1183
Query: 726 IQAFSRAHRIGQQN--KYINLATADTV 750
+QA RAHRIGQQN + + L T ++V
Sbjct: 1184 LQAQDRAHRIGQQNEVRVLRLCTVNSV 1210
Score = 240 (89.5 bits), Expect = 7.9e-61, Sum P(4) = 7.9e-61
Identities = 60/175 (34%), Positives = 96/175 (54%)
Query: 350 ANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKF 409
A R P ++RS KF+VLLT+YE I D +L I W ++VDE HR+K++ K +
Sbjct: 840 ARRAFVP-QLRSG--KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQV 896
Query: 410 LSG-YSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQ----AEFA------DI 458
L+ Y +LLLTGTP P F ++F+ A FA D+
Sbjct: 897 LNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDL 956
Query: 459 SKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYI 510
++EE + +RLH +L P +LRRLK +V +P K E++++ ++S +Q+ Y+++
Sbjct: 957 NEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHM 1011
Score = 221 (82.9 bits), Expect = 7.9e-61, Sum P(4) = 7.9e-61
Identities = 45/104 (43%), Positives = 63/104 (60%)
Query: 233 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 292
++ +KQ + + G+ L YQ++G+ WL + N++ ILADEMGLGKTIQTI + L
Sbjct: 740 ERVDKQSALMVN-GV-LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLM 797
Query: 293 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR 336
+ GPFL+ PLST+ NW EF+ WAP V+Y G R
Sbjct: 798 EHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR 841
Score = 219 (82.2 bits), Expect = 8.0e-51, Sum P(4) = 8.0e-51
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL +ADTVII+DSDWNPH D+QA RAHRIGQQN+V + R T NSVEE++ AK K+
Sbjct: 1163 LNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKL 1222
Query: 802 MLTHLVVRPGM 812
+ V++ GM
Sbjct: 1223 NVDQKVIQAGM 1233
Score = 190 (71.9 bits), Expect = 1.2e-55, Sum P(4) = 1.2e-55
Identities = 47/139 (33%), Positives = 78/139 (56%)
Query: 445 FNDLTSFQAEFADISKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSP 501
FN + E D+++EE + +RLH +L P +LRRLK +V +P K E++++ ++S
Sbjct: 943 FNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSA 1002
Query: 502 MQKKYYKY------ILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFP----AAAE 551
+Q+ Y++ +LT E + KG G +L+N +M L+K CNHPY+F + +E
Sbjct: 1003 LQRVLYRHMQAKGVLLTDGSEK-DKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSE 1061
Query: 552 EAPVQGGQYEIQALTRAAG 570
GG + L RA+G
Sbjct: 1062 HLGFTGGIVQGLDLYRASG 1080
Score = 48 (22.0 bits), Expect = 7.9e-61, Sum P(4) = 7.9e-61
Identities = 19/70 (27%), Positives = 29/70 (41%)
Query: 861 WVKLLRHH-YEQHQEDVSRTLGKGKRVRKQTXXXXXXXXXXXXXXXXLTGRRSAKKKEMS 919
W+K + E+ +E+V + K R RK+ T RS K E S
Sbjct: 1355 WLKAIEEGTLEEIEEEVRQK--KSSRKRKRDSEAGSSTPT--------TSTRSRDKDEES 1404
Query: 920 KQERDRPLPP 929
K+++ R PP
Sbjct: 1405 KKQKKRGRPP 1414
>UNIPROTKB|G3V790 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4, isoform
CRA_b" species:10116 "Rattus norvegicus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000977 "RNA
polymerase II regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001835
"blastocyst hatching" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IEA]
[GO:0007403 "glial cell fate determination" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0030216 "keratinocyte differentiation" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0030902
"hindbrain development" evidence=IEA] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IEA] [GO:0043388 "positive
regulation of DNA binding" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048562 "embryonic organ morphogenesis" evidence=IEA]
[GO:0048730 "epidermis morphogenesis" evidence=IEA] [GO:0060318
"definitive erythrocyte differentiation" evidence=IEA] [GO:0060347
"heart trabecula formation" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:CH473993
UniGene:Rn.23417 Ensembl:ENSRNOT00000013165 Uniprot:G3V790
Length = 1614
Score = 311 (114.5 bits), Expect = 7.9e-61, Sum P(4) = 7.9e-61
Identities = 67/147 (45%), Positives = 92/147 (62%)
Query: 610 GSTIYLVKWRDLPYDKATWEDENEDIPGLKES----IEFYNMTKMLDILEDYLDGEGYKY 665
G T +V+ DL +E + +P L+ + + F MT ++ I+EDY G+KY
Sbjct: 1064 GFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKY 1123
Query: 666 ERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWNPHND 725
R+DG R + FN PG+ F+FLLSTR+GGLG+NL +ADTVII+DSDWNPH D
Sbjct: 1124 LRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQD 1183
Query: 726 IQAFSRAHRIGQQN--KYINLATADTV 750
+QA RAHRIGQQN + + L T ++V
Sbjct: 1184 LQAQDRAHRIGQQNEVRVLRLCTVNSV 1210
Score = 240 (89.5 bits), Expect = 7.9e-61, Sum P(4) = 7.9e-61
Identities = 60/175 (34%), Positives = 96/175 (54%)
Query: 350 ANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKF 409
A R P ++RS KF+VLLT+YE I D +L I W ++VDE HR+K++ K +
Sbjct: 840 ARRAFVP-QLRSG--KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQV 896
Query: 410 LSG-YSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQ----AEFA------DI 458
L+ Y +LLLTGTP P F ++F+ A FA D+
Sbjct: 897 LNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDL 956
Query: 459 SKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYI 510
++EE + +RLH +L P +LRRLK +V +P K E++++ ++S +Q+ Y+++
Sbjct: 957 NEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHM 1011
Score = 221 (82.9 bits), Expect = 7.9e-61, Sum P(4) = 7.9e-61
Identities = 45/104 (43%), Positives = 63/104 (60%)
Query: 233 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 292
++ +KQ + + G+ L YQ++G+ WL + N++ ILADEMGLGKTIQTI + L
Sbjct: 740 ERVDKQSALMVN-GV-LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLM 797
Query: 293 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR 336
+ GPFL+ PLST+ NW EF+ WAP V+Y G R
Sbjct: 798 EHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR 841
Score = 219 (82.2 bits), Expect = 8.0e-51, Sum P(4) = 8.0e-51
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL +ADTVII+DSDWNPH D+QA RAHRIGQQN+V + R T NSVEE++ AK K+
Sbjct: 1163 LNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKL 1222
Query: 802 MLTHLVVRPGM 812
+ V++ GM
Sbjct: 1223 NVDQKVIQAGM 1233
Score = 190 (71.9 bits), Expect = 1.2e-55, Sum P(4) = 1.2e-55
Identities = 47/139 (33%), Positives = 78/139 (56%)
Query: 445 FNDLTSFQAEFADISKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSP 501
FN + E D+++EE + +RLH +L P +LRRLK +V +P K E++++ ++S
Sbjct: 943 FNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSA 1002
Query: 502 MQKKYYKY------ILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFP----AAAE 551
+Q+ Y++ +LT E + KG G +L+N +M L+K CNHPY+F + +E
Sbjct: 1003 LQRVLYRHMQAKGVLLTDGSEK-DKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSE 1061
Query: 552 EAPVQGGQYEIQALTRAAG 570
GG + L RA+G
Sbjct: 1062 HLGFTGGIVQGLDLYRASG 1080
Score = 48 (22.0 bits), Expect = 7.9e-61, Sum P(4) = 7.9e-61
Identities = 19/70 (27%), Positives = 29/70 (41%)
Query: 861 WVKLLRHH-YEQHQEDVSRTLGKGKRVRKQTXXXXXXXXXXXXXXXXLTGRRSAKKKEMS 919
W+K + E+ +E+V + K R RK+ T RS K E S
Sbjct: 1355 WLKAIEEGTLEEIEEEVRQK--KSSRKRKRDSEAGSSTPT--------TSTRSRDKDEES 1404
Query: 920 KQERDRPLPP 929
K+++ R PP
Sbjct: 1405 KKQKKRGRPP 1414
>UNIPROTKB|E1C2F7 [details] [associations]
symbol:E1C2F7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045111 "intermediate filament cytoskeleton" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565
"nBAF complex" evidence=IEA] [GO:0071778 "WINAC complex"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0045892 GO:GO:0008285 GO:GO:0030308 GO:GO:0045944
GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 GO:GO:0004386 GO:GO:0001105
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OMA:PQEGMHQ EMBL:AADN02068434 EMBL:AADN02068435 EMBL:AADN02068436
EMBL:AADN02068437 EMBL:AADN02068438 EMBL:AADN02068439
EMBL:AADN02068440 EMBL:AADN02068441 IPI:IPI00583413
Ensembl:ENSGALT00000016528 Uniprot:E1C2F7
Length = 1546
Score = 302 (111.4 bits), Expect = 9.5e-61, Sum P(3) = 9.5e-61
Identities = 69/155 (44%), Positives = 92/155 (59%)
Query: 598 ANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDY 657
+N VIN L S + + R LP +AT N + + F MT ++ I+EDY
Sbjct: 1010 SNGVINGAELYRASGKFELLDRILPKLRAT----NHRV------LLFCQMTSLMTIMEDY 1059
Query: 658 LDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYD 717
+ Y R+DG R + +FN PG+ F+FLLSTR+GGLG+NL ADTVII+D
Sbjct: 1060 FAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVIIFD 1119
Query: 718 SDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV 750
SDWNPH D+QA RAHRIGQQN + + L T ++V
Sbjct: 1120 SDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSV 1154
Score = 247 (92.0 bits), Expect = 9.5e-61, Sum P(3) = 9.5e-61
Identities = 67/198 (33%), Positives = 107/198 (54%)
Query: 328 TYVGDKDCRIVLRDHDISWEDT-ANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSI 386
TY DK V++ IS++ T A R ++RS KF+VLLT+YE I D +L I
Sbjct: 763 TYEFDKWAPSVVK---ISYKGTPAMRRSLVPQLRSG--KFNVLLTTYEYIIKDKHILAKI 817
Query: 387 EWAVLVVDEAHRLKSNQSKFFKFLSG-YSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKF 445
W ++VDE HR+K++ K + L+ Y ++LLTGTP P F
Sbjct: 818 RWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIF 877
Query: 446 NDLTSFQ----AEFA------DISKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSE 492
++F+ A FA D+++EE + +RLH +L P +LRRLK +V +P K E
Sbjct: 878 KSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVE 937
Query: 493 FIVRVELSPMQKKYYKYI 510
++++ ++S +QK Y+++
Sbjct: 938 YVIKCDMSALQKILYRHM 955
Score = 222 (83.2 bits), Expect = 9.5e-61, Sum P(3) = 9.5e-61
Identities = 44/101 (43%), Positives = 62/101 (61%)
Query: 231 LRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYS 290
+ ++ EKQ L + G H YQL+G+ W+ + N++ ILADEMGLGKTIQTI +
Sbjct: 682 ITERVEKQSSLLIN-GTLKH-YQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITY 739
Query: 291 LFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVG 331
L + GP+L+ PLST+ NW EF+ WAP ++Y G
Sbjct: 740 LMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKG 780
Score = 218 (81.8 bits), Expect = 1.1e-51, Sum P(3) = 1.1e-51
Identities = 41/71 (57%), Positives = 52/71 (73%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL ADTVII+DSDWNPH D+QA RAHRIGQQN+V + R T NSVEE++ AK K+
Sbjct: 1107 LNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKL 1166
Query: 802 MLTHLVVRPGM 812
+ V++ GM
Sbjct: 1167 NVDQKVIQAGM 1177
Score = 193 (73.0 bits), Expect = 4.2e-55, Sum P(3) = 4.2e-55
Identities = 47/138 (34%), Positives = 75/138 (54%)
Query: 445 FNDLTSFQAEFADISKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSP 501
FN + E D+++EE + +RLH +L P +LRRLK +V +P K E++++ ++S
Sbjct: 887 FNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSA 946
Query: 502 MQKKYYKY-----ILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFP----AAAEE 552
+QK Y++ IL + + KG G +L+N +M L+K CNHPY+F + AE
Sbjct: 947 LQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEH 1006
Query: 553 APVQGGQYEIQALTRAAG 570
G L RA+G
Sbjct: 1007 LGYSNGVINGAELYRASG 1024
>UNIPROTKB|D4A4J2 [details] [associations]
symbol:Smarca2 "Protein Smarca2" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
Pfam:PF08880 PROSITE:PS51194 SMART:SM00490 SMART:SM00592
SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
IPI:IPI00777186 Ensembl:ENSRNOT00000016283 ArrayExpress:D4A4J2
Uniprot:D4A4J2
Length = 1506
Score = 301 (111.0 bits), Expect = 1.1e-60, Sum P(3) = 1.1e-60
Identities = 68/155 (43%), Positives = 92/155 (59%)
Query: 598 ANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDY 657
+N VIN L S + + R LP +AT N + + F MT ++ I+EDY
Sbjct: 1043 SNGVINGAELYRASGKFELLDRILPKLRAT----NHRV------LLFCQMTSLMTIMEDY 1092
Query: 658 LDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYD 717
+ Y R+DG R + +FN PG+ F+FLLSTR+GGLG+NL ADTV+I+D
Sbjct: 1093 FAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFD 1152
Query: 718 SDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV 750
SDWNPH D+QA RAHRIGQQN + + L T ++V
Sbjct: 1153 SDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSV 1187
Score = 247 (92.0 bits), Expect = 1.1e-60, Sum P(3) = 1.1e-60
Identities = 67/198 (33%), Positives = 107/198 (54%)
Query: 328 TYVGDKDCRIVLRDHDISWEDT-ANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSI 386
TY DK V++ IS++ T A R ++RS KF+VLLT+YE I D +L I
Sbjct: 796 TYEFDKWAPSVVK---ISYKGTPAMRRSLVPQLRSG--KFNVLLTTYEYIIKDKHILAKI 850
Query: 387 EWAVLVVDEAHRLKSNQSKFFKFLSG-YSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKF 445
W ++VDE HR+K++ K + L+ Y ++LLTGTP P F
Sbjct: 851 RWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIF 910
Query: 446 NDLTSFQ----AEFA------DISKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSE 492
++F+ A FA D+++EE + +RLH +L P +LRRLK +V +P K E
Sbjct: 911 KSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVE 970
Query: 493 FIVRVELSPMQKKYYKYI 510
++++ ++S +QK Y+++
Sbjct: 971 YVIKCDMSALQKILYRHM 988
Score = 222 (83.2 bits), Expect = 1.1e-60, Sum P(3) = 1.1e-60
Identities = 44/101 (43%), Positives = 62/101 (61%)
Query: 231 LRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYS 290
+ ++ EKQ L + G H YQL+G+ W+ + N++ ILADEMGLGKTIQTI +
Sbjct: 715 ISERVEKQSALLIN-GTLKH-YQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITY 772
Query: 291 LFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVG 331
L + GP+L+ PLST+ NW EF+ WAP ++Y G
Sbjct: 773 LMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKG 813
Score = 217 (81.4 bits), Expect = 1.2e-51, Sum P(3) = 1.2e-51
Identities = 40/71 (56%), Positives = 52/71 (73%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL ADTV+I+DSDWNPH D+QA RAHRIGQQN+V + R T NSVEE++ AK K+
Sbjct: 1140 LNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKL 1199
Query: 802 MLTHLVVRPGM 812
+ V++ GM
Sbjct: 1200 NVDQKVIQAGM 1210
Score = 193 (73.0 bits), Expect = 4.9e-55, Sum P(3) = 4.9e-55
Identities = 47/138 (34%), Positives = 75/138 (54%)
Query: 445 FNDLTSFQAEFADISKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSP 501
FN + E D+++EE + +RLH +L P +LRRLK +V +P K E++++ ++S
Sbjct: 920 FNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSA 979
Query: 502 MQKKYYKY-----ILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFP----AAAEE 552
+QK Y++ IL + + KG G +L+N +M L+K CNHPY+F + AE
Sbjct: 980 LQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEH 1039
Query: 553 APVQGGQYEIQALTRAAG 570
G L RA+G
Sbjct: 1040 LGYSNGVINGAELYRASG 1057
>RGD|1311935 [details] [associations]
symbol:Chd1l "chromodomain helicase DNA binding protein 1-like"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1311935 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677
GO:GO:0006974 GO:GO:0016887 GO:GO:0006338 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 OrthoDB:EOG4SXNBV GeneTree:ENSGT00670000098110
IPI:IPI00560655 Ensembl:ENSRNOT00000043937 UCSC:RGD:1311935
ArrayExpress:D4ACG6 Uniprot:D4ACG6
Length = 903
Score = 407 (148.3 bits), Expect = 1.2e-60, Sum P(2) = 1.2e-60
Identities = 116/323 (35%), Positives = 164/323 (50%)
Query: 245 TGMQLHAYQLEGINWLRYSW-GQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLV 303
TG++L +YQLEG+NWL + GQN IL DEMGLGKT QTI L L + +GPFL+
Sbjct: 36 TGIRLRSYQLEGVNWLVQCFHGQN-GCILGDEMGLGKTCQTIALLIYLVGRLNDEGPFLI 94
Query: 304 SAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSST 363
PLS + NW+ E E +AP VTY GDK+ R R D+ E + I
Sbjct: 95 LCPLSVLSNWKEEMERFAPGLSCVTYTGDKEER-ARRQQDLRQESGFHVLLTTYEICLKD 153
Query: 364 VKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFL-SGYSIQNKLLLT 422
F + S+ ++ D A + ++L HR S S F+ L +G IQN L
Sbjct: 154 ASF-LKSFSWSVLAVDEAHRLKNQSSLL-----HRTLSEFSVVFRLLLTGTPIQNSL--- 204
Query: 423 GTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQ-VKRLHDLLGPHMLRRLKA 481
E+ D F + DI KE + LH LL P +LRR+KA
Sbjct: 205 ---QELYSLLSVVEPDLFCREQVED---FVQCYQDIEKESKSASELHRLLRPFLLRRVKA 258
Query: 482 DVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCN 541
V +P K+E ++ +S +QKKYYK IL ++ +A + ++V L N++ L+KC +
Sbjct: 259 QVATELPKKTEVVIYHGMSALQKKYYKAILMKDLDAFENETA-KKVKLQNVLTQLRKCVD 317
Query: 542 HPYLFPAAAEEAPVQGGQYEIQA 564
HPYLF E P + G++ I+A
Sbjct: 318 HPYLFDGVEPE-PFEVGEHLIEA 339
Score = 299 (110.3 bits), Expect = 1.2e-60, Sum P(2) = 1.2e-60
Identities = 64/114 (56%), Positives = 77/114 (67%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MT MLDIL+DY+D GY YER+DG++ G R +I F FVFLLSTR+GG+
Sbjct: 363 FSQMTHMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGKQPI--FVFLLSTRAGGV 420
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV--IIY 753
G+NL ADTVI DSD+NP ND+QA +RAHRIGQ K I L DTV I+Y
Sbjct: 421 GMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVY 474
Score = 200 (75.5 bits), Expect = 3.0e-50, Sum P(2) = 3.0e-50
Identities = 44/94 (46%), Positives = 61/94 (64%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL ADTVI DSD+NP ND+QA +RAHRIGQ V + R + R++VEE V + A K+
Sbjct: 422 MNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKL 481
Query: 802 MLTHLVVRPG---MGG-KQANFTKQELDDILRFG 831
LT++V+ G +G K A +L +IL+FG
Sbjct: 482 QLTNMVIEGGHFTLGAQKPAAEADLQLSEILKFG 515
>UNIPROTKB|A5PKK5 [details] [associations]
symbol:SMARCA2 "SMARCA2 protein" species:9913 "Bos taurus"
[GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636
OMA:PQEGMHQ GO:GO:0035887 OrthoDB:EOG418BMJ EMBL:DAAA02022747
EMBL:DAAA02022748 EMBL:DAAA02022749 EMBL:BC142521 IPI:IPI00854472
RefSeq:NP_001092585.1 UniGene:Bt.63204 SMR:A5PKK5 STRING:A5PKK5
Ensembl:ENSBTAT00000035681 GeneID:540904 KEGG:bta:540904
InParanoid:A5PKK5 NextBio:20878906 Uniprot:A5PKK5
Length = 1554
Score = 301 (111.0 bits), Expect = 1.2e-60, Sum P(3) = 1.2e-60
Identities = 68/155 (43%), Positives = 92/155 (59%)
Query: 598 ANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDY 657
+N VIN L S + + R LP +AT N + + F MT ++ I+EDY
Sbjct: 1018 SNGVINGAELYRASGKFELLDRILPKLRAT----NHRV------LLFCQMTSLMTIMEDY 1067
Query: 658 LDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYD 717
+ Y R+DG R + +FN PG+ F+FLLSTR+GGLG+NL ADTV+I+D
Sbjct: 1068 FAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFD 1127
Query: 718 SDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV 750
SDWNPH D+QA RAHRIGQQN + + L T ++V
Sbjct: 1128 SDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSV 1162
Score = 247 (92.0 bits), Expect = 1.2e-60, Sum P(3) = 1.2e-60
Identities = 67/198 (33%), Positives = 107/198 (54%)
Query: 328 TYVGDKDCRIVLRDHDISWEDT-ANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSI 386
TY DK V++ IS++ T A R ++RS KF+VLLT+YE I D +L I
Sbjct: 771 TYEFDKWAPSVVK---ISYKGTPAMRRSLVPQLRSG--KFNVLLTTYEYIIKDKHILAKI 825
Query: 387 EWAVLVVDEAHRLKSNQSKFFKFLSG-YSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKF 445
W ++VDE HR+K++ K + L+ Y ++LLTGTP P F
Sbjct: 826 RWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIF 885
Query: 446 NDLTSFQ----AEFA------DISKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSE 492
++F+ A FA D+++EE + +RLH +L P +LRRLK +V +P K E
Sbjct: 886 KSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVE 945
Query: 493 FIVRVELSPMQKKYYKYI 510
++++ ++S +QK Y+++
Sbjct: 946 YVIKCDMSALQKILYRHM 963
Score = 222 (83.2 bits), Expect = 1.2e-60, Sum P(3) = 1.2e-60
Identities = 44/101 (43%), Positives = 62/101 (61%)
Query: 231 LRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYS 290
+ ++ EKQ L + G H YQL+G+ W+ + N++ ILADEMGLGKTIQTI +
Sbjct: 690 ISERVEKQSALLIN-GTLKH-YQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITY 747
Query: 291 LFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVG 331
L + GP+L+ PLST+ NW EF+ WAP ++Y G
Sbjct: 748 LMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKG 788
Score = 217 (81.4 bits), Expect = 1.4e-51, Sum P(3) = 1.4e-51
Identities = 40/71 (56%), Positives = 52/71 (73%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL ADTV+I+DSDWNPH D+QA RAHRIGQQN+V + R T NSVEE++ AK K+
Sbjct: 1115 LNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKL 1174
Query: 802 MLTHLVVRPGM 812
+ V++ GM
Sbjct: 1175 NVDQKVIQAGM 1185
Score = 193 (73.0 bits), Expect = 5.5e-55, Sum P(3) = 5.5e-55
Identities = 47/138 (34%), Positives = 75/138 (54%)
Query: 445 FNDLTSFQAEFADISKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSP 501
FN + E D+++EE + +RLH +L P +LRRLK +V +P K E++++ ++S
Sbjct: 895 FNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSA 954
Query: 502 MQKKYYKY-----ILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFP----AAAEE 552
+QK Y++ IL + + KG G +L+N +M L+K CNHPY+F + AE
Sbjct: 955 LQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEH 1014
Query: 553 APVQGGQYEIQALTRAAG 570
G L RA+G
Sbjct: 1015 LGYSNGVINGAELYRASG 1032
>UNIPROTKB|E2RKP4 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0071778 "WINAC complex" evidence=IEA]
[GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0045892 GO:GO:0008285
GO:GO:0030308 GO:GO:0045944 GO:GO:0044212 GO:GO:0045111
GO:GO:0000790 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0071778 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0035887
EMBL:AAEX03000600 Ensembl:ENSCAFT00000003206 NextBio:20852013
Uniprot:E2RKP4
Length = 1556
Score = 301 (111.0 bits), Expect = 1.3e-60, Sum P(3) = 1.3e-60
Identities = 68/155 (43%), Positives = 92/155 (59%)
Query: 598 ANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDY 657
+N VIN L S + + R LP +AT N + + F MT ++ I+EDY
Sbjct: 1020 SNGVINGAELYRASGKFELLDRILPKLRAT----NHRV------LLFCQMTSLMTIMEDY 1069
Query: 658 LDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYD 717
+ Y R+DG R + +FN PG+ F+FLLSTR+GGLG+NL ADTV+I+D
Sbjct: 1070 FAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFD 1129
Query: 718 SDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV 750
SDWNPH D+QA RAHRIGQQN + + L T ++V
Sbjct: 1130 SDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSV 1164
Score = 247 (92.0 bits), Expect = 1.3e-60, Sum P(3) = 1.3e-60
Identities = 67/198 (33%), Positives = 107/198 (54%)
Query: 328 TYVGDKDCRIVLRDHDISWEDT-ANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSI 386
TY DK V++ IS++ T A R ++RS KF+VLLT+YE I D +L I
Sbjct: 773 TYEFDKWAPSVVK---ISYKGTPAMRRSLVPQLRSG--KFNVLLTTYEYIIKDKHILAKI 827
Query: 387 EWAVLVVDEAHRLKSNQSKFFKFLSG-YSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKF 445
W ++VDE HR+K++ K + L+ Y ++LLTGTP P F
Sbjct: 828 RWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIF 887
Query: 446 NDLTSFQ----AEFA------DISKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSE 492
++F+ A FA D+++EE + +RLH +L P +LRRLK +V +P K E
Sbjct: 888 KSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVE 947
Query: 493 FIVRVELSPMQKKYYKYI 510
++++ ++S +QK Y+++
Sbjct: 948 YVIKCDMSALQKILYRHM 965
Score = 222 (83.2 bits), Expect = 1.3e-60, Sum P(3) = 1.3e-60
Identities = 44/101 (43%), Positives = 62/101 (61%)
Query: 231 LRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYS 290
+ ++ EKQ L + G H YQL+G+ W+ + N++ ILADEMGLGKTIQTI +
Sbjct: 692 ISERVEKQSALLIN-GTLKH-YQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITY 749
Query: 291 LFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVG 331
L + GP+L+ PLST+ NW EF+ WAP ++Y G
Sbjct: 750 LMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKG 790
Score = 217 (81.4 bits), Expect = 1.4e-51, Sum P(3) = 1.4e-51
Identities = 40/71 (56%), Positives = 52/71 (73%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL ADTV+I+DSDWNPH D+QA RAHRIGQQN+V + R T NSVEE++ AK K+
Sbjct: 1117 LNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKL 1176
Query: 802 MLTHLVVRPGM 812
+ V++ GM
Sbjct: 1177 NVDQKVIQAGM 1187
Score = 193 (73.0 bits), Expect = 5.6e-55, Sum P(3) = 5.6e-55
Identities = 47/138 (34%), Positives = 75/138 (54%)
Query: 445 FNDLTSFQAEFADISKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSP 501
FN + E D+++EE + +RLH +L P +LRRLK +V +P K E++++ ++S
Sbjct: 897 FNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSA 956
Query: 502 MQKKYYKY-----ILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFP----AAAEE 552
+QK Y++ IL + + KG G +L+N +M L+K CNHPY+F + AE
Sbjct: 957 LQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEH 1016
Query: 553 APVQGGQYEIQALTRAAG 570
G L RA+G
Sbjct: 1017 LGYSNGVINGAELYRASG 1034
>UNIPROTKB|F1SJG5 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 OMA:PQEGMHQ GO:GO:0035887
EMBL:CT998562 EMBL:CU062411 Ensembl:ENSSSCT00000005766
Uniprot:F1SJG5
Length = 1556
Score = 301 (111.0 bits), Expect = 1.3e-60, Sum P(3) = 1.3e-60
Identities = 68/155 (43%), Positives = 92/155 (59%)
Query: 598 ANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDY 657
+N VIN L S + + R LP +AT N + + F MT ++ I+EDY
Sbjct: 1020 SNGVINGAELYRASGKFELLDRILPKLRAT----NHRV------LLFCQMTSLMTIMEDY 1069
Query: 658 LDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYD 717
+ Y R+DG R + +FN PG+ F+FLLSTR+GGLG+NL ADTV+I+D
Sbjct: 1070 FAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFD 1129
Query: 718 SDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV 750
SDWNPH D+QA RAHRIGQQN + + L T ++V
Sbjct: 1130 SDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSV 1164
Score = 247 (92.0 bits), Expect = 1.3e-60, Sum P(3) = 1.3e-60
Identities = 67/198 (33%), Positives = 107/198 (54%)
Query: 328 TYVGDKDCRIVLRDHDISWEDT-ANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSI 386
TY DK V++ IS++ T A R ++RS KF+VLLT+YE I D +L I
Sbjct: 773 TYEFDKWAPSVVK---ISYKGTPAMRRSLVPQLRSG--KFNVLLTTYEYIIKDKHILAKI 827
Query: 387 EWAVLVVDEAHRLKSNQSKFFKFLSG-YSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKF 445
W ++VDE HR+K++ K + L+ Y ++LLTGTP P F
Sbjct: 828 RWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIF 887
Query: 446 NDLTSFQ----AEFA------DISKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSE 492
++F+ A FA D+++EE + +RLH +L P +LRRLK +V +P K E
Sbjct: 888 KSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVE 947
Query: 493 FIVRVELSPMQKKYYKYI 510
++++ ++S +QK Y+++
Sbjct: 948 YVIKCDMSALQKILYRHM 965
Score = 222 (83.2 bits), Expect = 1.3e-60, Sum P(3) = 1.3e-60
Identities = 44/101 (43%), Positives = 62/101 (61%)
Query: 231 LRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYS 290
+ ++ EKQ L + G H YQL+G+ W+ + N++ ILADEMGLGKTIQTI +
Sbjct: 692 ISERVEKQSALLIN-GTLKH-YQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITY 749
Query: 291 LFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVG 331
L + GP+L+ PLST+ NW EF+ WAP ++Y G
Sbjct: 750 LMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKG 790
Score = 217 (81.4 bits), Expect = 1.4e-51, Sum P(3) = 1.4e-51
Identities = 40/71 (56%), Positives = 52/71 (73%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL ADTV+I+DSDWNPH D+QA RAHRIGQQN+V + R T NSVEE++ AK K+
Sbjct: 1117 LNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKL 1176
Query: 802 MLTHLVVRPGM 812
+ V++ GM
Sbjct: 1177 NVDQKVIQAGM 1187
Score = 193 (73.0 bits), Expect = 5.6e-55, Sum P(3) = 5.6e-55
Identities = 47/138 (34%), Positives = 75/138 (54%)
Query: 445 FNDLTSFQAEFADISKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSP 501
FN + E D+++EE + +RLH +L P +LRRLK +V +P K E++++ ++S
Sbjct: 897 FNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSA 956
Query: 502 MQKKYYKY-----ILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFP----AAAEE 552
+QK Y++ IL + + KG G +L+N +M L+K CNHPY+F + AE
Sbjct: 957 LQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEH 1016
Query: 553 APVQGGQYEIQALTRAAG 570
G L RA+G
Sbjct: 1017 LGYSNGVINGAELYRASG 1034
>UNIPROTKB|J9P5P2 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6595 OMA:PQEGMHQ EMBL:AAEX03000600 RefSeq:XP_850159.1
Ensembl:ENSCAFT00000046362 GeneID:476335 KEGG:cfa:476335
Uniprot:J9P5P2
Length = 1574
Score = 301 (111.0 bits), Expect = 1.3e-60, Sum P(3) = 1.3e-60
Identities = 68/155 (43%), Positives = 92/155 (59%)
Query: 598 ANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDY 657
+N VIN L S + + R LP +AT N + + F MT ++ I+EDY
Sbjct: 1020 SNGVINGAELYRASGKFELLDRILPKLRAT----NHRV------LLFCQMTSLMTIMEDY 1069
Query: 658 LDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYD 717
+ Y R+DG R + +FN PG+ F+FLLSTR+GGLG+NL ADTV+I+D
Sbjct: 1070 FAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFD 1129
Query: 718 SDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV 750
SDWNPH D+QA RAHRIGQQN + + L T ++V
Sbjct: 1130 SDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSV 1164
Score = 247 (92.0 bits), Expect = 1.3e-60, Sum P(3) = 1.3e-60
Identities = 67/198 (33%), Positives = 107/198 (54%)
Query: 328 TYVGDKDCRIVLRDHDISWEDT-ANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSI 386
TY DK V++ IS++ T A R ++RS KF+VLLT+YE I D +L I
Sbjct: 773 TYEFDKWAPSVVK---ISYKGTPAMRRSLVPQLRSG--KFNVLLTTYEYIIKDKHILAKI 827
Query: 387 EWAVLVVDEAHRLKSNQSKFFKFLSG-YSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKF 445
W ++VDE HR+K++ K + L+ Y ++LLTGTP P F
Sbjct: 828 RWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIF 887
Query: 446 NDLTSFQ----AEFA------DISKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSE 492
++F+ A FA D+++EE + +RLH +L P +LRRLK +V +P K E
Sbjct: 888 KSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVE 947
Query: 493 FIVRVELSPMQKKYYKYI 510
++++ ++S +QK Y+++
Sbjct: 948 YVIKCDMSALQKILYRHM 965
Score = 222 (83.2 bits), Expect = 1.3e-60, Sum P(3) = 1.3e-60
Identities = 44/101 (43%), Positives = 62/101 (61%)
Query: 231 LRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYS 290
+ ++ EKQ L + G H YQL+G+ W+ + N++ ILADEMGLGKTIQTI +
Sbjct: 692 ISERVEKQSALLIN-GTLKH-YQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITY 749
Query: 291 LFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVG 331
L + GP+L+ PLST+ NW EF+ WAP ++Y G
Sbjct: 750 LMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKG 790
Score = 217 (81.4 bits), Expect = 1.5e-51, Sum P(3) = 1.5e-51
Identities = 40/71 (56%), Positives = 52/71 (73%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL ADTV+I+DSDWNPH D+QA RAHRIGQQN+V + R T NSVEE++ AK K+
Sbjct: 1117 LNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKL 1176
Query: 802 MLTHLVVRPGM 812
+ V++ GM
Sbjct: 1177 NVDQKVIQAGM 1187
Score = 193 (73.0 bits), Expect = 5.8e-55, Sum P(3) = 5.8e-55
Identities = 47/138 (34%), Positives = 75/138 (54%)
Query: 445 FNDLTSFQAEFADISKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSP 501
FN + E D+++EE + +RLH +L P +LRRLK +V +P K E++++ ++S
Sbjct: 897 FNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSA 956
Query: 502 MQKKYYKY-----ILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFP----AAAEE 552
+QK Y++ IL + + KG G +L+N +M L+K CNHPY+F + AE
Sbjct: 957 LQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEH 1016
Query: 553 APVQGGQYEIQALTRAAG 570
G L RA+G
Sbjct: 1017 LGYSNGVINGAELYRASG 1034
>MGI|MGI:99603 [details] [associations]
symbol:Smarca2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006325 "chromatin organization"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=ISO;TAS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0071564 "npBAF complex"
evidence=IDA] [GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778
"WINAC complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 MGI:MGI:99603 GO:GO:0005524
GO:GO:0045892 GO:GO:0008285 GO:GO:0007399 GO:GO:0030308
GO:GO:0045944 GO:GO:0044212 GO:GO:0045111 GO:GO:0000790
GO:GO:0071564 GO:GO:0016514 GO:GO:0071565 GO:GO:0004386
GO:GO:0001105 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778 KO:K11647
ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
EMBL:BC075641 IPI:IPI01018407 RefSeq:NP_035546.2 UniGene:Mm.313303
ProteinModelPortal:Q6DIC0 SMR:Q6DIC0 DIP:DIP-48888N STRING:Q6DIC0
PhosphoSite:Q6DIC0 PaxDb:Q6DIC0 PRIDE:Q6DIC0 GeneID:67155
KEGG:mmu:67155 UCSC:uc008hbn.1 InParanoid:Q6DIC0 OrthoDB:EOG418BMJ
NextBio:323746 Bgee:Q6DIC0 Genevestigator:Q6DIC0 Uniprot:Q6DIC0
Length = 1577
Score = 301 (111.0 bits), Expect = 1.3e-60, Sum P(3) = 1.3e-60
Identities = 68/155 (43%), Positives = 92/155 (59%)
Query: 598 ANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDY 657
+N VIN L S + + R LP +AT N + + F MT ++ I+EDY
Sbjct: 1041 SNGVINGAELYRASGKFELLDRILPKLRAT----NHRV------LLFCQMTSLMTIMEDY 1090
Query: 658 LDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYD 717
+ Y R+DG R + +FN PG+ F+FLLSTR+GGLG+NL ADTV+I+D
Sbjct: 1091 FAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFD 1150
Query: 718 SDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV 750
SDWNPH D+QA RAHRIGQQN + + L T ++V
Sbjct: 1151 SDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSV 1185
Score = 247 (92.0 bits), Expect = 1.3e-60, Sum P(3) = 1.3e-60
Identities = 67/198 (33%), Positives = 107/198 (54%)
Query: 328 TYVGDKDCRIVLRDHDISWEDT-ANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSI 386
TY DK V++ IS++ T A R ++RS KF+VLLT+YE I D +L I
Sbjct: 794 TYEFDKWAPSVVK---ISYKGTPAMRRSLVPQLRSG--KFNVLLTTYEYIIKDKHILAKI 848
Query: 387 EWAVLVVDEAHRLKSNQSKFFKFLSG-YSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKF 445
W ++VDE HR+K++ K + L+ Y ++LLTGTP P F
Sbjct: 849 RWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIF 908
Query: 446 NDLTSFQ----AEFA------DISKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSE 492
++F+ A FA D+++EE + +RLH +L P +LRRLK +V +P K E
Sbjct: 909 KSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVE 968
Query: 493 FIVRVELSPMQKKYYKYI 510
++++ ++S +QK Y+++
Sbjct: 969 YVIKCDMSALQKILYRHM 986
Score = 222 (83.2 bits), Expect = 1.3e-60, Sum P(3) = 1.3e-60
Identities = 44/101 (43%), Positives = 62/101 (61%)
Query: 231 LRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYS 290
+ ++ EKQ L + G H YQL+G+ W+ + N++ ILADEMGLGKTIQTI +
Sbjct: 713 ISERVEKQSALLIN-GTLKH-YQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITY 770
Query: 291 LFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVG 331
L + GP+L+ PLST+ NW EF+ WAP ++Y G
Sbjct: 771 LMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKG 811
Score = 217 (81.4 bits), Expect = 1.5e-51, Sum P(3) = 1.5e-51
Identities = 40/71 (56%), Positives = 52/71 (73%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL ADTV+I+DSDWNPH D+QA RAHRIGQQN+V + R T NSVEE++ AK K+
Sbjct: 1138 LNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKL 1197
Query: 802 MLTHLVVRPGM 812
+ V++ GM
Sbjct: 1198 NVDQKVIQAGM 1208
Score = 193 (73.0 bits), Expect = 5.9e-55, Sum P(3) = 5.9e-55
Identities = 47/138 (34%), Positives = 75/138 (54%)
Query: 445 FNDLTSFQAEFADISKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSP 501
FN + E D+++EE + +RLH +L P +LRRLK +V +P K E++++ ++S
Sbjct: 918 FNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSA 977
Query: 502 MQKKYYKY-----ILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFP----AAAEE 552
+QK Y++ IL + + KG G +L+N +M L+K CNHPY+F + AE
Sbjct: 978 LQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEH 1037
Query: 553 APVQGGQYEIQALTRAAG 570
G L RA+G
Sbjct: 1038 LGYSNGVINGAELYRASG 1055
Score = 37 (18.1 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 520 PKGGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAPVQ 556
P G GQ++ L K P P+ A +A VQ
Sbjct: 265 PSGPGQELLLSGQSAPQKLSAPAPSGRPSPAPQAAVQ 301
>UNIPROTKB|P51531 [details] [associations]
symbol:SMARCA2 "Probable global transcription activator
SNF2L2" species:9606 "Homo sapiens" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0035887 "aortic
smooth muscle cell differentiation" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IDA] [GO:0071564 "npBAF complex"
evidence=ISS] [GO:0071565 "nBAF complex" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0071778 "WINAC
complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IMP] [GO:0006338 "chromatin remodeling"
evidence=TAS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=TAS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0008285 GO:GO:0007399
GO:GO:0005654 GO:GO:0030308 GO:GO:0006338 GO:GO:0000122
GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 EMBL:CH471071 GO:GO:0004386
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0001105 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
KO:K11647 ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0008094 EMBL:X72889 EMBL:D26155 EMBL:AL359076 EMBL:AL138755
IPI:IPI00386718 IPI:IPI00514648 PIR:S39580 PIR:S45251
RefSeq:NP_003061.3 RefSeq:NP_620614.2 UniGene:Hs.298990 PDB:2DAT
PDBsum:2DAT ProteinModelPortal:P51531 SMR:P51531 DIP:DIP-29005N
IntAct:P51531 MINT:MINT-1898892 STRING:P51531 PhosphoSite:P51531
DMDM:212276472 PaxDb:P51531 PRIDE:P51531 DNASU:6595
Ensembl:ENST00000349721 Ensembl:ENST00000357248
Ensembl:ENST00000382194 Ensembl:ENST00000382203 GeneID:6595
KEGG:hsa:6595 UCSC:uc003zhc.3 UCSC:uc003zhd.3 CTD:6595
GeneCards:GC09P002005 HGNC:HGNC:11098 HPA:HPA029981 MIM:600014
MIM:601358 neXtProt:NX_P51531 Orphanet:3051 PharmGKB:PA35948
HOGENOM:HOG000172363 HOVERGEN:HBG056636 InParanoid:P51531
OMA:PQEGMHQ PhylomeDB:P51531 EvolutionaryTrace:P51531
GenomeRNAi:6595 NextBio:25649 PMAP-CutDB:P51531 ArrayExpress:P51531
Bgee:P51531 CleanEx:HS_SMARCA2 Genevestigator:P51531
GermOnline:ENSG00000080503 GO:GO:0035887 Uniprot:P51531
Length = 1590
Score = 301 (111.0 bits), Expect = 1.4e-60, Sum P(3) = 1.4e-60
Identities = 68/155 (43%), Positives = 92/155 (59%)
Query: 598 ANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDY 657
+N VIN L S + + R LP +AT N + + F MT ++ I+EDY
Sbjct: 1036 SNGVINGAELYRASGKFELLDRILPKLRAT----NHRV------LLFCQMTSLMTIMEDY 1085
Query: 658 LDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYD 717
+ Y R+DG R + +FN PG+ F+FLLSTR+GGLG+NL ADTV+I+D
Sbjct: 1086 FAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFD 1145
Query: 718 SDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV 750
SDWNPH D+QA RAHRIGQQN + + L T ++V
Sbjct: 1146 SDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSV 1180
Score = 247 (92.0 bits), Expect = 1.4e-60, Sum P(3) = 1.4e-60
Identities = 67/198 (33%), Positives = 107/198 (54%)
Query: 328 TYVGDKDCRIVLRDHDISWEDT-ANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSI 386
TY DK V++ IS++ T A R ++RS KF+VLLT+YE I D +L I
Sbjct: 789 TYEFDKWAPSVVK---ISYKGTPAMRRSLVPQLRSG--KFNVLLTTYEYIIKDKHILAKI 843
Query: 387 EWAVLVVDEAHRLKSNQSKFFKFLSG-YSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKF 445
W ++VDE HR+K++ K + L+ Y ++LLTGTP P F
Sbjct: 844 RWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIF 903
Query: 446 NDLTSFQ----AEFA------DISKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSE 492
++F+ A FA D+++EE + +RLH +L P +LRRLK +V +P K E
Sbjct: 904 KSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVE 963
Query: 493 FIVRVELSPMQKKYYKYI 510
++++ ++S +QK Y+++
Sbjct: 964 YVIKCDMSALQKILYRHM 981
Score = 222 (83.2 bits), Expect = 1.4e-60, Sum P(3) = 1.4e-60
Identities = 44/101 (43%), Positives = 62/101 (61%)
Query: 231 LRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYS 290
+ ++ EKQ L + G H YQL+G+ W+ + N++ ILADEMGLGKTIQTI +
Sbjct: 708 ISERVEKQSALLIN-GTLKH-YQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITY 765
Query: 291 LFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVG 331
L + GP+L+ PLST+ NW EF+ WAP ++Y G
Sbjct: 766 LMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKG 806
Score = 217 (81.4 bits), Expect = 1.5e-51, Sum P(3) = 1.5e-51
Identities = 40/71 (56%), Positives = 52/71 (73%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL ADTV+I+DSDWNPH D+QA RAHRIGQQN+V + R T NSVEE++ AK K+
Sbjct: 1133 LNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKL 1192
Query: 802 MLTHLVVRPGM 812
+ V++ GM
Sbjct: 1193 NVDQKVIQAGM 1203
Score = 193 (73.0 bits), Expect = 6.1e-55, Sum P(3) = 6.1e-55
Identities = 47/138 (34%), Positives = 75/138 (54%)
Query: 445 FNDLTSFQAEFADISKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSP 501
FN + E D+++EE + +RLH +L P +LRRLK +V +P K E++++ ++S
Sbjct: 913 FNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSA 972
Query: 502 MQKKYYKY-----ILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFP----AAAEE 552
+QK Y++ IL + + KG G +L+N +M L+K CNHPY+F + AE
Sbjct: 973 LQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEH 1032
Query: 553 APVQGGQYEIQALTRAAG 570
G L RA+G
Sbjct: 1033 LGYSNGVINGAELYRASG 1050
>UNIPROTKB|E9PTG1 [details] [associations]
symbol:Smarca2 "Protein Smarca2" species:10116 "Rattus
norvegicus" [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OMA:PQEGMHQ GO:GO:0035887 IPI:IPI00464435
Ensembl:ENSRNOT00000016740 ArrayExpress:E9PTG1 Uniprot:E9PTG1
Length = 1597
Score = 301 (111.0 bits), Expect = 1.4e-60, Sum P(3) = 1.4e-60
Identities = 68/155 (43%), Positives = 92/155 (59%)
Query: 598 ANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDY 657
+N VIN L S + + R LP +AT N + + F MT ++ I+EDY
Sbjct: 1043 SNGVINGAELYRASGKFELLDRILPKLRAT----NHRV------LLFCQMTSLMTIMEDY 1092
Query: 658 LDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYD 717
+ Y R+DG R + +FN PG+ F+FLLSTR+GGLG+NL ADTV+I+D
Sbjct: 1093 FAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFD 1152
Query: 718 SDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV 750
SDWNPH D+QA RAHRIGQQN + + L T ++V
Sbjct: 1153 SDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSV 1187
Score = 247 (92.0 bits), Expect = 1.4e-60, Sum P(3) = 1.4e-60
Identities = 67/198 (33%), Positives = 107/198 (54%)
Query: 328 TYVGDKDCRIVLRDHDISWEDT-ANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSI 386
TY DK V++ IS++ T A R ++RS KF+VLLT+YE I D +L I
Sbjct: 796 TYEFDKWAPSVVK---ISYKGTPAMRRSLVPQLRSG--KFNVLLTTYEYIIKDKHILAKI 850
Query: 387 EWAVLVVDEAHRLKSNQSKFFKFLSG-YSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKF 445
W ++VDE HR+K++ K + L+ Y ++LLTGTP P F
Sbjct: 851 RWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIF 910
Query: 446 NDLTSFQ----AEFA------DISKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSE 492
++F+ A FA D+++EE + +RLH +L P +LRRLK +V +P K E
Sbjct: 911 KSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVE 970
Query: 493 FIVRVELSPMQKKYYKYI 510
++++ ++S +QK Y+++
Sbjct: 971 YVIKCDMSALQKILYRHM 988
Score = 222 (83.2 bits), Expect = 1.4e-60, Sum P(3) = 1.4e-60
Identities = 44/101 (43%), Positives = 62/101 (61%)
Query: 231 LRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYS 290
+ ++ EKQ L + G H YQL+G+ W+ + N++ ILADEMGLGKTIQTI +
Sbjct: 715 ISERVEKQSALLIN-GTLKH-YQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITY 772
Query: 291 LFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVG 331
L + GP+L+ PLST+ NW EF+ WAP ++Y G
Sbjct: 773 LMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKG 813
Score = 217 (81.4 bits), Expect = 1.5e-51, Sum P(3) = 1.5e-51
Identities = 40/71 (56%), Positives = 52/71 (73%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL ADTV+I+DSDWNPH D+QA RAHRIGQQN+V + R T NSVEE++ AK K+
Sbjct: 1140 LNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKL 1199
Query: 802 MLTHLVVRPGM 812
+ V++ GM
Sbjct: 1200 NVDQKVIQAGM 1210
Score = 193 (73.0 bits), Expect = 6.2e-55, Sum P(3) = 6.2e-55
Identities = 47/138 (34%), Positives = 75/138 (54%)
Query: 445 FNDLTSFQAEFADISKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSP 501
FN + E D+++EE + +RLH +L P +LRRLK +V +P K E++++ ++S
Sbjct: 920 FNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSA 979
Query: 502 MQKKYYKY-----ILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFP----AAAEE 552
+QK Y++ IL + + KG G +L+N +M L+K CNHPY+F + AE
Sbjct: 980 LQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEH 1039
Query: 553 APVQGGQYEIQALTRAAG 570
G L RA+G
Sbjct: 1040 LGYSNGVINGAELYRASG 1057
>ZFIN|ZDB-GENE-041014-72 [details] [associations]
symbol:ino80 "INO80 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
ZFIN:ZDB-GENE-041014-72 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:BX897725
HOGENOM:HOG000231795 HOVERGEN:HBG057875 OMA:KVIRKFW IPI:IPI00516098
UniGene:Dr.84310 ProteinModelPortal:Q5RGG8 STRING:Q5RGG8
InParanoid:Q5RGG8 Uniprot:Q5RGG8
Length = 1582
Score = 464 (168.4 bits), Expect = 1.5e-60, Sum P(2) = 1.5e-60
Identities = 115/325 (35%), Positives = 167/325 (51%)
Query: 248 QLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPL 307
+L YQL+G+NWL + Q I+ ILADEMGLGKT+Q+I L L + + GPFL+ +P
Sbjct: 518 KLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISPA 577
Query: 308 STIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFH 367
ST+ NW +EF + P F V+ Y G+ R V+R W + + FH
Sbjct: 578 STLNNWHQEFSRFVPKFKVLPYWGNPHDRKVIRKF---WSQKT--------LYTQNAPFH 626
Query: 368 VLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXX 427
V++TSY+L+ DV ++W +V+DEA LKS+ S +K L + +N+LLLTGTP
Sbjct: 627 VVITSYQLVVQDVKYFQRVKWQYMVLDEAQALKSSTSVRWKILLQFQCRNRLLLTGTPIQ 686
Query: 428 XXXXXXXXXXXXXTPEKFNDLTSFQAEFA-DISK---------EEQVKRLHDLLGPHMLR 477
P F+ F F+ DI E Q+ RLH +L P MLR
Sbjct: 687 NTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLR 746
Query: 478 RLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTR-NFEAL--NPKGGGQQV-----SL 529
R+K DV + K E + +L+ Q+ Y+ + + + E L + G QQ SL
Sbjct: 747 RIKKDVENELSDKIEILTYCQLTSRQRLLYQALKNKISIEDLLQSSMGSAQQAHSTTSSL 806
Query: 530 LNIMMDLKKCCNHPYLFPAAAEEAP 554
+N++M +K CNHP LF +P
Sbjct: 807 MNLVMQFRKVCNHPDLFERQEIRSP 831
Score = 247 (92.0 bits), Expect = 1.5e-60, Sum P(2) = 1.5e-60
Identities = 50/94 (53%), Positives = 65/94 (69%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
+ MT+M+D+LE+Y+ + Y R+DG+ S R++ + F + FVFLLSTR+GGL
Sbjct: 1154 YSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDMVADFQSR-TDIFVFLLSTRAGGL 1212
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ 737
GINL ADTVI YDSDWNP D QA RAHR+GQ
Sbjct: 1213 GINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQ 1246
Score = 205 (77.2 bits), Expect = 4.0e-56, Sum P(2) = 4.0e-56
Identities = 42/94 (44%), Positives = 56/94 (59%)
Query: 718 SDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 777
+D+ DI F + R G INL ADTVI YDSDWNP D QA RAHR+GQ +
Sbjct: 1192 ADFQSRTDIFVFLLSTRAGGLG--INLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ 1249
Query: 778 VMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPG 811
V +YR + + ++EER+ Q AK K + +V+ G
Sbjct: 1250 VTVYRLICKGTIEERILQRAKEKSEIQRMVISGG 1283
>UNIPROTKB|E2RJ89 [details] [associations]
symbol:SMARCA4 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6597 EMBL:AAEX03012414 RefSeq:XP_867683.1
Ensembl:ENSCAFT00000027907 GeneID:476710 KEGG:cfa:476710
OMA:HKPMESM Uniprot:E2RJ89
Length = 1614
Score = 311 (114.5 bits), Expect = 1.6e-60, Sum P(4) = 1.6e-60
Identities = 67/147 (45%), Positives = 92/147 (62%)
Query: 610 GSTIYLVKWRDLPYDKATWEDENEDIPGLKES----IEFYNMTKMLDILEDYLDGEGYKY 665
G T +V+ DL +E + +P L+ + + F MT ++ I+EDY G+KY
Sbjct: 1064 GFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKY 1123
Query: 666 ERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWNPHND 725
R+DG R + FN PG+ F+FLLSTR+GGLG+NL +ADTVII+DSDWNPH D
Sbjct: 1124 LRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQD 1183
Query: 726 IQAFSRAHRIGQQN--KYINLATADTV 750
+QA RAHRIGQQN + + L T ++V
Sbjct: 1184 LQAQDRAHRIGQQNEVRVLRLCTVNSV 1210
Score = 240 (89.5 bits), Expect = 1.6e-60, Sum P(4) = 1.6e-60
Identities = 60/175 (34%), Positives = 96/175 (54%)
Query: 350 ANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKF 409
A R P ++RS KF+VLLT+YE I D +L I W ++VDE HR+K++ K +
Sbjct: 840 ARRAFVP-QLRSG--KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQV 896
Query: 410 LSG-YSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQ----AEFA------DI 458
L+ Y +LLLTGTP P F ++F+ A FA D+
Sbjct: 897 LNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDL 956
Query: 459 SKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYI 510
++EE + +RLH +L P +LRRLK +V +P K E++++ ++S +Q+ Y+++
Sbjct: 957 NEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHM 1011
Score = 221 (82.9 bits), Expect = 1.6e-60, Sum P(4) = 1.6e-60
Identities = 45/104 (43%), Positives = 63/104 (60%)
Query: 233 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 292
++ +KQ + + G+ L YQ++G+ WL + N++ ILADEMGLGKTIQTI + L
Sbjct: 740 ERVDKQSALMVN-GV-LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLM 797
Query: 293 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR 336
+ GPFL+ PLST+ NW EF+ WAP V+Y G R
Sbjct: 798 EHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR 841
Score = 219 (82.2 bits), Expect = 1.6e-50, Sum P(4) = 1.6e-50
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL +ADTVII+DSDWNPH D+QA RAHRIGQQN+V + R T NSVEE++ AK K+
Sbjct: 1163 LNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKL 1222
Query: 802 MLTHLVVRPGM 812
+ V++ GM
Sbjct: 1223 NVDQKVIQAGM 1233
Score = 190 (71.9 bits), Expect = 2.6e-55, Sum P(4) = 2.6e-55
Identities = 47/139 (33%), Positives = 78/139 (56%)
Query: 445 FNDLTSFQAEFADISKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSP 501
FN + E D+++EE + +RLH +L P +LRRLK +V +P K E++++ ++S
Sbjct: 943 FNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSA 1002
Query: 502 MQKKYYKY------ILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFP----AAAE 551
+Q+ Y++ +LT E + KG G +L+N +M L+K CNHPY+F + +E
Sbjct: 1003 LQRVLYRHMQAKGVLLTDGSEK-DKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSE 1061
Query: 552 EAPVQGGQYEIQALTRAAG 570
GG + L RA+G
Sbjct: 1062 HLGFTGGIVQGLDLYRASG 1080
Score = 45 (20.9 bits), Expect = 1.6e-60, Sum P(4) = 1.6e-60
Identities = 18/70 (25%), Positives = 29/70 (41%)
Query: 861 WVKLLRHH-YEQHQEDVSRTLGKGKRVRKQTXXXXXXXXXXXXXXXXLTGRRSAKKKEMS 919
W+K + E+ +E+V + K R RK+ T RS K + S
Sbjct: 1355 WLKAIEEGTLEEIEEEVRQK--KSSRKRKRDSDAGSSTPT--------TSTRSRDKDDES 1404
Query: 920 KQERDRPLPP 929
K+++ R PP
Sbjct: 1405 KKQKKRGRPP 1414
>UNIPROTKB|P51532 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0016514
"SWI/SNF complex" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0071564 "npBAF complex" evidence=ISS;IDA]
[GO:0071565 "nBAF complex" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=IC;IDA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IDA] [GO:0000790
"nuclear chromatin" evidence=IDA] [GO:0071778 "WINAC complex"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IDA]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=IMP] [GO:0050681 "androgen receptor binding"
evidence=IPI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IGI] [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=TAS] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0002039 "p53 binding" evidence=IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0003713 "transcription
coactivator activity" evidence=IMP;NAS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=NAS]
[GO:0006337 "nucleosome disassembly" evidence=IDA] [GO:0043923
"positive regulation by host of viral transcription" evidence=IMP]
[GO:0030957 "Tat protein binding" evidence=IPI] [GO:0003407 "neural
retina development" evidence=IEP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IMP] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0003714 GO:GO:0007399
GO:GO:0051091 GO:GO:0030308 GO:GO:0003677 GO:GO:0006338
GO:GO:0000122 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0003407 GO:GO:0071565 GO:GO:0004386 EMBL:CH471106
GO:GO:0001105 GO:GO:0045749 Orphanet:1465 GO:GO:0006337
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 GO:GO:0071778 KO:K11647 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:AC011442 GO:GO:0008094 GO:GO:0060766
GO:GO:0043923 EMBL:AC011485 HOGENOM:HOG000172363 HOVERGEN:HBG056636
CTD:6597 EMBL:U29175 EMBL:D26156 EMBL:AF254822 EMBL:EU430756
EMBL:EU430757 EMBL:EU430758 EMBL:EU430759 EMBL:AC006127
IPI:IPI00293426 IPI:IPI00900285 IPI:IPI00900328 IPI:IPI00900338
IPI:IPI01016040 PIR:S45252 RefSeq:NP_001122316.1
RefSeq:NP_001122317.1 RefSeq:NP_001122318.1 RefSeq:NP_001122319.1
RefSeq:NP_001122320.1 RefSeq:NP_003063.2 UniGene:Hs.327527 PDB:2GRC
PDB:2H60 PDB:3UVD PDBsum:2GRC PDBsum:2H60 PDBsum:3UVD
ProteinModelPortal:P51532 SMR:P51532 DIP:DIP-24249N IntAct:P51532
MINT:MINT-204078 STRING:P51532 PhosphoSite:P51532 DMDM:116242792
PaxDb:P51532 PRIDE:P51532 Ensembl:ENST00000344626
Ensembl:ENST00000413806 Ensembl:ENST00000429416
Ensembl:ENST00000444061 Ensembl:ENST00000450717
Ensembl:ENST00000541122 GeneID:6597 KEGG:hsa:6597 UCSC:uc002mqf.4
GeneCards:GC19P011071 HGNC:HGNC:11100 HPA:CAB004208 MIM:603254
MIM:613325 MIM:614609 neXtProt:NX_P51532 Orphanet:231108
PharmGKB:PA35950 ChiTaRS:SMARCA4 EvolutionaryTrace:P51532
GenomeRNAi:6597 NextBio:25661 ArrayExpress:P51532 Bgee:P51532
CleanEx:HS_SMARCA4 Genevestigator:P51532 GermOnline:ENSG00000127616
Uniprot:P51532
Length = 1647
Score = 311 (114.5 bits), Expect = 1.8e-60, Sum P(4) = 1.8e-60
Identities = 67/147 (45%), Positives = 92/147 (62%)
Query: 610 GSTIYLVKWRDLPYDKATWEDENEDIPGLKES----IEFYNMTKMLDILEDYLDGEGYKY 665
G T +V+ DL +E + +P L+ + + F MT ++ I+EDY G+KY
Sbjct: 1064 GFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKY 1123
Query: 666 ERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWNPHND 725
R+DG R + FN PG+ F+FLLSTR+GGLG+NL +ADTVII+DSDWNPH D
Sbjct: 1124 LRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQD 1183
Query: 726 IQAFSRAHRIGQQN--KYINLATADTV 750
+QA RAHRIGQQN + + L T ++V
Sbjct: 1184 LQAQDRAHRIGQQNEVRVLRLCTVNSV 1210
Score = 240 (89.5 bits), Expect = 1.8e-60, Sum P(4) = 1.8e-60
Identities = 60/175 (34%), Positives = 96/175 (54%)
Query: 350 ANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKF 409
A R P ++RS KF+VLLT+YE I D +L I W ++VDE HR+K++ K +
Sbjct: 840 ARRAFVP-QLRSG--KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQV 896
Query: 410 LSG-YSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQ----AEFA------DI 458
L+ Y +LLLTGTP P F ++F+ A FA D+
Sbjct: 897 LNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDL 956
Query: 459 SKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYI 510
++EE + +RLH +L P +LRRLK +V +P K E++++ ++S +Q+ Y+++
Sbjct: 957 NEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHM 1011
Score = 221 (82.9 bits), Expect = 1.8e-60, Sum P(4) = 1.8e-60
Identities = 45/104 (43%), Positives = 63/104 (60%)
Query: 233 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 292
++ +KQ + + G+ L YQ++G+ WL + N++ ILADEMGLGKTIQTI + L
Sbjct: 740 ERVDKQSALMVN-GV-LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLM 797
Query: 293 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR 336
+ GPFL+ PLST+ NW EF+ WAP V+Y G R
Sbjct: 798 EHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR 841
Score = 219 (82.2 bits), Expect = 1.8e-50, Sum P(4) = 1.8e-50
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL +ADTVII+DSDWNPH D+QA RAHRIGQQN+V + R T NSVEE++ AK K+
Sbjct: 1163 LNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKL 1222
Query: 802 MLTHLVVRPGM 812
+ V++ GM
Sbjct: 1223 NVDQKVIQAGM 1233
Score = 190 (71.9 bits), Expect = 2.8e-55, Sum P(4) = 2.8e-55
Identities = 47/139 (33%), Positives = 78/139 (56%)
Query: 445 FNDLTSFQAEFADISKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSP 501
FN + E D+++EE + +RLH +L P +LRRLK +V +P K E++++ ++S
Sbjct: 943 FNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSA 1002
Query: 502 MQKKYYKY------ILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFP----AAAE 551
+Q+ Y++ +LT E + KG G +L+N +M L+K CNHPY+F + +E
Sbjct: 1003 LQRVLYRHMQAKGVLLTDGSEK-DKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSE 1061
Query: 552 EAPVQGGQYEIQALTRAAG 570
GG + L RA+G
Sbjct: 1062 HLGFTGGIVQGLDLYRASG 1080
Score = 45 (20.9 bits), Expect = 1.8e-60, Sum P(4) = 1.8e-60
Identities = 18/70 (25%), Positives = 29/70 (41%)
Query: 861 WVKLLRHH-YEQHQEDVSRTLGKGKRVRKQTXXXXXXXXXXXXXXXXLTGRRSAKKKEMS 919
W+K + E+ +E+V + K R RK+ T RS K + S
Sbjct: 1388 WLKAIEEGTLEEIEEEVRQK--KSSRKRKRDSDAGSSTPT--------TSTRSRDKDDES 1437
Query: 920 KQERDRPLPP 929
K+++ R PP
Sbjct: 1438 KKQKKRGRPP 1447
>MGI|MGI:1915392 [details] [associations]
symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000070 "mitotic sister chromatid segregation"
evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003678
"DNA helicase activity" evidence=ISO] [GO:0003779 "actin binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005874 "microtubule" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0010571 "positive regulation of DNA replication involved in S
phase" evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0031011 "Ino80 complex" evidence=ISO] [GO:0032508 "DNA duplex
unwinding" evidence=ISO] [GO:0034644 "cellular response to UV"
evidence=ISO] [GO:0043014 "alpha-tubulin binding" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051225 "spindle
assembly" evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
[GO:0070914 "UV-damage excision repair" evidence=ISO] [GO:0071479
"cellular response to ionizing radiation" evidence=ISO] [GO:2000045
"regulation of G1/S transition of mitotic cell cycle" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 MGI:MGI:1915392 GO:GO:0005524
GO:GO:0005634 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0070914 GO:GO:2000045 GO:GO:0010571 EMBL:AL844862 KO:K11665
CTD:54617 GeneTree:ENSGT00680000100052 HOGENOM:HOG000231795
HOVERGEN:HBG057875 OMA:KVIRKFW OrthoDB:EOG4ZKJKF EMBL:AK040612
EMBL:AK129317 EMBL:BC059235 IPI:IPI00378561 IPI:IPI00785415
RefSeq:NP_080850.2 UniGene:Mm.330496 ProteinModelPortal:Q6ZPV2
SMR:Q6ZPV2 IntAct:Q6ZPV2 STRING:Q6ZPV2 PhosphoSite:Q6ZPV2
PaxDb:Q6ZPV2 PRIDE:Q6ZPV2 Ensembl:ENSMUST00000049920
Ensembl:ENSMUST00000110808 GeneID:68142 KEGG:mmu:68142
InParanoid:Q6ZPV2 NextBio:326516 Bgee:Q6ZPV2 Genevestigator:Q6ZPV2
GermOnline:ENSMUSG00000034154 Uniprot:Q6ZPV2
Length = 1559
Score = 464 (168.4 bits), Expect = 1.8e-60, Sum P(2) = 1.8e-60
Identities = 119/335 (35%), Positives = 171/335 (51%)
Query: 248 QLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPL 307
+L YQL+G+NWL + Q I+ ILADEMGLGKT+Q+I L L + + GPFL+ +P
Sbjct: 519 KLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISPA 578
Query: 308 STIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFH 367
ST+ NW +EF + P F V+ Y G+ R V+R W + + FH
Sbjct: 579 STLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRF---WSQKT--------LYTQDAPFH 627
Query: 368 VLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXX 427
V++TSY+L+ DV ++W +V+DEA LKS+ S +K L + +N+LLLTGTP
Sbjct: 628 VVITSYQLVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQ 687
Query: 428 XXXXXXXXXXXXXTPEKFNDLTSFQAEFA-DISK---------EEQVKRLHDLLGPHMLR 477
P F+ F F+ DI E Q+ RLH +L P MLR
Sbjct: 688 NTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLR 747
Query: 478 RLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTR-NFEAL--NPKGGGQQV-----SL 529
R+K DV + K E + +L+ QK Y+ + + + E L + G QQ SL
Sbjct: 748 RIKKDVENELSDKIEILTYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQNTTSSL 807
Query: 530 LNIMMDLKKCCNHPYLFPAAAEEAP--VQGGQYEI 562
+N++M +K CNHP LF +P + YEI
Sbjct: 808 MNLVMQFRKVCNHPELFERQETWSPFHISLKPYEI 842
Score = 246 (91.7 bits), Expect = 1.8e-60, Sum P(2) = 1.8e-60
Identities = 50/94 (53%), Positives = 64/94 (68%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
+ MT+M+D+LE+Y+ + Y R+DG+ S R++ + F FVFLLSTR+GGL
Sbjct: 1126 YSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDMVADFQTRN-DIFVFLLSTRAGGL 1184
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ 737
GINL ADTVI YDSDWNP D QA RAHR+GQ
Sbjct: 1185 GINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQ 1218
Score = 211 (79.3 bits), Expect = 8.9e-57, Sum P(2) = 8.9e-57
Identities = 43/94 (45%), Positives = 57/94 (60%)
Query: 718 SDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 777
+D+ NDI F + R G INL ADTVI YDSDWNP D QA RAHR+GQ +
Sbjct: 1164 ADFQTRNDIFVFLLSTRAGGLG--INLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ 1221
Query: 778 VMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPG 811
V +YR + + ++EER+ Q AK K + +V+ G
Sbjct: 1222 VTVYRLICKGTIEERILQRAKEKSEIQRMVISGG 1255
>UNIPROTKB|E1BAN8 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000045 "regulation of G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:DAAA02028556 EMBL:DAAA02028557 IPI:IPI00685860
RefSeq:NP_001192313.1 UniGene:Bt.55708 Ensembl:ENSBTAT00000013708
GeneID:505992 KEGG:bta:505992 NextBio:20867400 Uniprot:E1BAN8
Length = 1566
Score = 464 (168.4 bits), Expect = 1.9e-60, Sum P(2) = 1.9e-60
Identities = 115/317 (36%), Positives = 166/317 (52%)
Query: 248 QLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPL 307
+L YQL+G+NWL + Q I+ ILADEMGLGKT+Q+I L L + + GPFL+ +P
Sbjct: 526 KLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISPA 585
Query: 308 STIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFH 367
ST+ NW +EF + P F V+ Y G+ R V+R W + + FH
Sbjct: 586 STLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRF---WSQKT--------LYTQDAPFH 634
Query: 368 VLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXX 427
V++TSY+L+ DV ++W +V+DEA LKS+ S +K L + +N+LLLTGTP
Sbjct: 635 VVITSYQLVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQ 694
Query: 428 XXXXXXXXXXXXXTPEKFNDLTSFQAEFA-DISK---------EEQVKRLHDLLGPHMLR 477
P F+ F F+ DI E Q+ RLH +L P MLR
Sbjct: 695 NTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLR 754
Query: 478 RLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTR-NFEAL--NPKGGGQQV-----SL 529
R+K DV + K E ++ +L+ QK Y+ + + + E L + G QQ SL
Sbjct: 755 RIKKDVENELSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQTTTSSL 814
Query: 530 LNIMMDLKKCCNHPYLF 546
+N++M +K CNHP LF
Sbjct: 815 MNLVMQFRKVCNHPELF 831
Score = 246 (91.7 bits), Expect = 1.9e-60, Sum P(2) = 1.9e-60
Identities = 50/94 (53%), Positives = 64/94 (68%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
+ MT+M+D+LE+Y+ + Y R+DG+ S R++ + F FVFLLSTR+GGL
Sbjct: 1133 YSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDMVADFQTRN-DIFVFLLSTRAGGL 1191
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ 737
GINL ADTVI YDSDWNP D QA RAHR+GQ
Sbjct: 1192 GINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQ 1225
Score = 211 (79.3 bits), Expect = 9.0e-57, Sum P(2) = 9.0e-57
Identities = 43/94 (45%), Positives = 57/94 (60%)
Query: 718 SDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 777
+D+ NDI F + R G INL ADTVI YDSDWNP D QA RAHR+GQ +
Sbjct: 1171 ADFQTRNDIFVFLLSTRAGGLG--INLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ 1228
Query: 778 VMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPG 811
V +YR + + ++EER+ Q AK K + +V+ G
Sbjct: 1229 VTVYRLICKGTIEERILQRAKEKSEIQRMVISGG 1262
>SGD|S000003118 [details] [associations]
symbol:INO80 "ATPase and nucleosome spacing factor"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA;IMP;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0042766 "nucleosome mobilization" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0043486 "histone exchange"
evidence=IDA] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
activity" evidence=IDA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IMP;IDA] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0043618 "regulation of transcription from RNA polymerase II
promoter in response to stress" evidence=IMP] [GO:0016584
"nucleosome positioning" evidence=IDA] [GO:0031011 "Ino80 complex"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 SGD:S000003118
GO:GO:0005524 EMBL:BK006941 GO:GO:0003677 GO:GO:0006281
GO:GO:0045944 GO:GO:0016887 GO:GO:0006366 GO:GO:0031011
GO:GO:0006348 GO:GO:0004386 GO:GO:0043486 GO:GO:0042766 EMBL:Z48618
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:X99960 GO:GO:0016584 GO:GO:0043618 KO:K11665
GeneTree:ENSGT00680000100052 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
EMBL:Z72672 PIR:S60416 RefSeq:NP_011365.1 ProteinModelPortal:P53115
SMR:P53115 DIP:DIP-1386N IntAct:P53115 MINT:MINT-388693
STRING:P53115 PaxDb:P53115 PeptideAtlas:P53115 EnsemblFungi:YGL150C
GeneID:852728 KEGG:sce:YGL150C CYGD:YGL150c OMA:DEFSDWF
NextBio:972117 Genevestigator:P53115 GermOnline:YGL150C
Uniprot:P53115
Length = 1489
Score = 459 (166.6 bits), Expect = 2.2e-60, Sum P(3) = 2.2e-60
Identities = 120/354 (33%), Positives = 182/354 (51%)
Query: 225 EKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQT 284
+ PT+ L + +QP L T L YQL+G+NWL + Q I+ ILADEMGLGKT+Q+
Sbjct: 686 QNPTS-LGEITIEQPKILACT---LKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQS 741
Query: 285 ITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 344
I+ L L + + GPFLV P ST+ NW E + P F ++ Y G+ + R VLR
Sbjct: 742 ISVLAHLAENHNIWGPFLVVTPASTLHNWVNEISKFLPQFKILPYWGNANDRKVLRKF-- 799
Query: 345 SWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQS 404
W+ R K FHV++TSY+++ D L ++W +++DEA +KS+QS
Sbjct: 800 -WDRKNLRYNK-------NAPFHVMVTSYQMVVTDANYLQKMKWQYMILDEAQAIKSSQS 851
Query: 405 KFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFA-DISK--- 460
+K L + +N+LLLTGTP P F+ F F+ DI
Sbjct: 852 SRWKNLLSFHCRNRLLLTGTPIQNSMQELWALLHFIMPSLFDSHDEFNEWFSKDIESHAE 911
Query: 461 ------EEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYI---L 511
++Q++RLH +L P MLRR+K +V + K E V +L+ Q K Y+ + +
Sbjct: 912 ANTKLNQQQLRRLHMILKPFMLRRVKKNVQSELGDKIEIDVLCDLTQRQAKLYQVLKSQI 971
Query: 512 TRNFEAL-----------NPKGGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAP 554
+ N++A+ + G +L+N +M +K CNHP LF A ++P
Sbjct: 972 STNYDAIENAATNDSTSNSASNSGSDQNLINAVMQFRKVCNHPDLFERADVDSP 1025
Score = 248 (92.4 bits), Expect = 2.2e-60, Sum P(3) = 2.2e-60
Identities = 49/94 (52%), Positives = 64/94 (68%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
++ MTKM+D++E+YL Y + R+DG+ R++ + + FVFLLSTR+GGL
Sbjct: 1321 YFQMTKMMDLMEEYLTYRQYNHIRLDGSSKLEDRRDLVHDWQT-NPEIFVFLLSTRAGGL 1379
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ 737
GINL ADTVI YDSDWNP D QA RAHR+GQ
Sbjct: 1380 GINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQ 1413
Score = 200 (75.5 bits), Expect = 2.4e-55, Sum P(4) = 2.4e-55
Identities = 41/90 (45%), Positives = 55/90 (61%)
Query: 719 DWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKV 778
DW + +I F + R G INL ADTVI YDSDWNP D QA RAHR+GQ +V
Sbjct: 1360 DWQTNPEIFVFLLSTRAGGLG--INLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQV 1417
Query: 779 MIYRFVTRNSVEERVTQVAKRKMMLTHLVV 808
+YR + R ++EER+ AK+K + +V+
Sbjct: 1418 TVYRLLVRGTIEERMRDRAKQKEQVQQVVM 1447
Score = 50 (22.7 bits), Expect = 2.2e-60, Sum P(3) = 2.2e-60
Identities = 14/54 (25%), Positives = 22/54 (40%)
Query: 204 ELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGI 257
+L DEDG+ K R+ D K+ L GM+++A + I
Sbjct: 412 DLDNDEDGSESHKRRKLNNNTANGADDANKRKFNTRHGLPTYGMKMNAKEARAI 465
Score = 44 (20.5 bits), Expect = 2.4e-55, Sum P(4) = 2.4e-55
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 634 DIPGLKESIEFYNMTKMLDI-LEDYLDGEGYKYERIDGNITGSMRQESIDRF 684
DIP + + YNM I +ED+ G E ++ N + ++ S+DRF
Sbjct: 1248 DIPAITQ----YNMHVKKGIPVEDF-PKTGLFPEPLNKNFSSNISMPSMDRF 1294
Score = 41 (19.5 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 460 KEEQVKRLHDLLGPHMLRRLKADVLKN 486
K+ VKRL L+ R + + LKN
Sbjct: 378 KQYHVKRLKKLINDAKREREREEALKN 404
Score = 38 (18.4 bits), Expect = 1.9e-38, Sum P(3) = 1.9e-38
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 928 PPLLARVGGNIEVLNQLEELLSD--MKSDVSRLPA 960
PP+ V G+ V N + L D + +S +PA
Sbjct: 1217 PPVTIEVLGSSHVTNSINNELFDPLISQALSDIPA 1251
Score = 37 (18.1 bits), Expect = 5.1e-59, Sum P(3) = 5.1e-59
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 225 EKPTTDLRKKYEKQ 238
E+ DL+KK EK+
Sbjct: 547 EREERDLKKKIEKE 560
Score = 37 (18.1 bits), Expect = 5.7e-14, Sum P(3) = 5.7e-14
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 247 MQLHAYQLEGINWLRYSWGQNI 268
++ HAY+ E +N ++ + N+
Sbjct: 1193 VEKHAYEREYLNCIQRGYHPNV 1214
>UNIPROTKB|F1NP27 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 EMBL:AADN02065411 EMBL:AADN02065412
EMBL:AADN02065413 IPI:IPI00591777 Ensembl:ENSGALT00000024661
ArrayExpress:F1NP27 Uniprot:F1NP27
Length = 1803
Score = 378 (138.1 bits), Expect = 2.5e-60, Sum P(4) = 2.5e-60
Identities = 87/220 (39%), Positives = 123/220 (55%)
Query: 236 EKQPPFLDD-TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKE 294
+KQP ++ ++L YQL G+ WL +SW + ILADEMGLGKTIQTI+FL LF E
Sbjct: 464 KKQPSYIGGHESLELRDYQLNGL-WLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHE 522
Query: 295 GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGG 354
GPFL+ PLST+ +W+RE +TWAP V Y+GD R ++R H+ W
Sbjct: 523 HQLYGPFLLVVPLSTLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHE--WMH------ 574
Query: 355 KPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYS 414
P ++ +KF++LLT+YE++ D + LG + WA + VDEAHRLK++ S +K L
Sbjct: 575 -P---QTKRLKFNILLTTYEILLKDKSFLGGLNWAFIGVDEAHRLKNDDSLLYKTL---- 626
Query: 415 IQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAE 454
I + + T PEKF+ F+ E
Sbjct: 627 IDLVTIDSDTAPSCTIPQELWSLHFIMPEKFSSWEDFEEE 666
Score = 368 (134.6 bits), Expect = 3.3e-59, Sum P(4) = 3.3e-59
Identities = 93/266 (34%), Positives = 141/266 (53%)
Query: 360 RSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKL 419
++ +KF++LLT+YE++ D + LG + WA + VDEAHRLK++ S +K L I
Sbjct: 576 QTKRLKFNILLTTYEILLKDKSFLGGLNWAFIGVDEAHRLKNDDSLLYKTL----IDLVT 631
Query: 420 LLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRL 479
+ + T PEKF+ F+ E +E LH L P +LRR+
Sbjct: 632 IDSDTAPSCTIPQELWSLHFIMPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRV 690
Query: 480 KADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKC 539
K DV K++P+K E I+R+E+S +QK+YYK+ILTRN++AL+ G LNIMM+LKKC
Sbjct: 691 KKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKC 750
Query: 540 CNHPYLFPAAAEEAPVQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHRYGIKPEWLIAN 599
CNH YL ++ Q +Q L R++G E G+R LI +
Sbjct: 751 CNHCYLIKPP-DDNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRV------LIFS 803
Query: 600 RVINSKTLRDGSTIYLVKWRDLPYDK 625
+++ + D YL K+R P+ +
Sbjct: 804 QMVR---MLDILAEYL-KYRQFPFQR 825
Score = 326 (119.8 bits), Expect = 2.5e-60, Sum P(4) = 2.5e-60
Identities = 59/101 (58%), Positives = 81/101 (80%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M +MLDIL +YL + ++R+DG+I G +R++++D FNA G+ F FLLSTR+GGL
Sbjct: 802 FSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGL 861
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINL 744
GINLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ K +N+
Sbjct: 862 GINLASADTVVIFDSDWNPQNDLQAQARAHRIGQK-KQVNI 901
Score = 250 (93.1 bits), Expect = 2.0e-52, Sum P(4) = 2.0e-52
Identities = 55/102 (53%), Positives = 70/102 (68%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ +V IYR VT+ SVEE + + AK+KM
Sbjct: 863 INLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKM 922
Query: 802 MLTHLVV-RPGMGGK-----------QANFTKQELDDILRFG 831
+L HLV+ R GK F K+EL IL+FG
Sbjct: 923 VLDHLVIQRMDTTGKTVLHTGSTPSSSTPFNKEELSAILKFG 964
Score = 71 (30.1 bits), Expect = 2.5e-60, Sum P(4) = 2.5e-60
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 119 HNINDEELEKKYYRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWED 174
+N E + + +Y I E +IA+ N K+ G Y KW+ LPY + +WED
Sbjct: 371 YNCQQELTDDLHKQYQIV-ERIIAHS--NQKSAA-GYPDYYCKWQGLPYSECSWED 422
Score = 69 (29.3 bits), Expect = 1.7e-26, Sum P(4) = 1.7e-26
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 594 EWLIANRVI---NSKTLRDGSTIYLVKWRDLPYDKATWED 630
++ I R+I N K+ G Y KW+ LPY + +WED
Sbjct: 384 QYQIVERIIAHSNQKSAA-GYPDYYCKWQGLPYSECSWED 422
Score = 56 (24.8 bits), Expect = 9.1e-59, Sum P(4) = 9.1e-59
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 148 SKTLRDGSTIYLVKWRDLPYDKATWEDEN----EDIPGLKE 184
SK L G YL+KW+ + TWE E +++ G+K+
Sbjct: 307 SKEL--GEIQYLIKWKGWSHIHNTWETEETLKQQNVKGMKK 345
Score = 56 (24.8 bits), Expect = 4.5e-24, Sum P(3) = 4.5e-24
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 604 SKTLRDGSTIYLVKWRDLPYDKATWEDEN----EDIPGLKE 640
SK L G YL+KW+ + TWE E +++ G+K+
Sbjct: 307 SKEL--GEIQYLIKWKGWSHIHNTWETEETLKQQNVKGMKK 345
Score = 38 (18.4 bits), Expect = 2.5e-60, Sum P(4) = 2.5e-60
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 867 HHYEQHQEDVSRTLGKGKR 885
HH ++HQ D + KR
Sbjct: 1643 HHKDRHQGDAYKKSDSRKR 1661
>UNIPROTKB|A7Z019 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9913
"Bos taurus" [GO:0071565 "nBAF complex" evidence=ISS] [GO:0071564
"npBAF complex" evidence=ISS] [GO:0060347 "heart trabecula
formation" evidence=IEA] [GO:0060318 "definitive erythrocyte
differentiation" evidence=IEA] [GO:0048730 "epidermis
morphogenesis" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0006351 GO:GO:0003682 GO:GO:0006338
GO:GO:0000122 GO:GO:0071564 GO:GO:0071565 GO:GO:0000902
GO:GO:0004386 GO:GO:0001570 GO:GO:0035116 GO:GO:0005719
GO:GO:0030902 GO:GO:0048730 GO:GO:0000977 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0019827
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347 GO:GO:0043966
GO:GO:0043388 KO:K11647 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726
HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
OrthoDB:EOG418BMJ EMBL:BC153216 IPI:IPI00693529
RefSeq:NP_001099084.1 UniGene:Bt.27590 ProteinModelPortal:A7Z019
SMR:A7Z019 STRING:A7Z019 PRIDE:A7Z019 GeneID:414274 KEGG:bta:414274
CTD:6597 InParanoid:A7Z019 NextBio:20818684 ArrayExpress:A7Z019
Uniprot:A7Z019
Length = 1606
Score = 311 (114.5 bits), Expect = 2.6e-60, Sum P(4) = 2.6e-60
Identities = 67/147 (45%), Positives = 92/147 (62%)
Query: 610 GSTIYLVKWRDLPYDKATWEDENEDIPGLKES----IEFYNMTKMLDILEDYLDGEGYKY 665
G T +V+ DL +E + +P L+ + + F MT ++ I+EDY G+KY
Sbjct: 1056 GFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKY 1115
Query: 666 ERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWNPHND 725
R+DG R + FN PG+ F+FLLSTR+GGLG+NL +ADTVII+DSDWNPH D
Sbjct: 1116 LRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQD 1175
Query: 726 IQAFSRAHRIGQQN--KYINLATADTV 750
+QA RAHRIGQQN + + L T ++V
Sbjct: 1176 LQAQDRAHRIGQQNEVRVLRLCTVNSV 1202
Score = 240 (89.5 bits), Expect = 2.6e-60, Sum P(4) = 2.6e-60
Identities = 60/175 (34%), Positives = 96/175 (54%)
Query: 350 ANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKF 409
A R P ++RS KF+VLLT+YE I D +L I W ++VDE HR+K++ K +
Sbjct: 832 ARRAFVP-QLRSG--KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQV 888
Query: 410 LSG-YSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQ----AEFA------DI 458
L+ Y +LLLTGTP P F ++F+ A FA D+
Sbjct: 889 LNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDL 948
Query: 459 SKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYI 510
++EE + +RLH +L P +LRRLK +V +P K E++++ ++S +Q+ Y+++
Sbjct: 949 NEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHM 1003
Score = 221 (82.9 bits), Expect = 2.6e-60, Sum P(4) = 2.6e-60
Identities = 45/104 (43%), Positives = 63/104 (60%)
Query: 233 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 292
++ +KQ + + G+ L YQ++G+ WL + N++ ILADEMGLGKTIQTI + L
Sbjct: 732 ERVDKQSALMVN-GV-LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLM 789
Query: 293 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR 336
+ GPFL+ PLST+ NW EF+ WAP V+Y G R
Sbjct: 790 EHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR 833
Score = 219 (82.2 bits), Expect = 2.6e-50, Sum P(4) = 2.6e-50
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL +ADTVII+DSDWNPH D+QA RAHRIGQQN+V + R T NSVEE++ AK K+
Sbjct: 1155 LNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKL 1214
Query: 802 MLTHLVVRPGM 812
+ V++ GM
Sbjct: 1215 NVDQKVIQAGM 1225
Score = 190 (71.9 bits), Expect = 4.0e-55, Sum P(4) = 4.0e-55
Identities = 47/139 (33%), Positives = 78/139 (56%)
Query: 445 FNDLTSFQAEFADISKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSP 501
FN + E D+++EE + +RLH +L P +LRRLK +V +P K E++++ ++S
Sbjct: 935 FNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSA 994
Query: 502 MQKKYYKY------ILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFP----AAAE 551
+Q+ Y++ +LT E + KG G +L+N +M L+K CNHPY+F + +E
Sbjct: 995 LQRVLYRHMQAKGVLLTDGSEK-DKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSE 1053
Query: 552 EAPVQGGQYEIQALTRAAG 570
GG + L RA+G
Sbjct: 1054 HLGFTGGIVQGLDLYRASG 1072
Score = 43 (20.2 bits), Expect = 2.6e-60, Sum P(4) = 2.6e-60
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 908 TGRRSAKKKEMSKQERDRPLPP 929
T RS K + SK+++ R PP
Sbjct: 1385 TSTRSRDKDDESKKQKKRGRPP 1406
>UNIPROTKB|Q9ULG1 [details] [associations]
symbol:INO80 "DNA helicase INO80" species:9606 "Homo
sapiens" [GO:0003779 "actin binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0031011 "Ino80 complex" evidence=IDA] [GO:0034644 "cellular
response to UV" evidence=IMP] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IMP] [GO:0070914
"UV-damage excision repair" evidence=IMP] [GO:0071479 "cellular
response to ionizing radiation" evidence=IMP] [GO:0006302
"double-strand break repair" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0030307 "positive regulation of cell growth"
evidence=IMP] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IMP] [GO:0010571 "positive regulation of DNA
replication involved in S phase" evidence=IMP] [GO:0043014
"alpha-tubulin binding" evidence=IMP] [GO:0051225 "spindle
assembly" evidence=IMP] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0032508 "DNA duplex unwinding" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
GO:GO:0005524 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043014
GO:GO:0003678 GO:GO:0070914 GO:GO:2000045 EMBL:CH471125
GO:GO:0010571 KO:K11665 CTD:54617 ChiTaRS:INO80 EMBL:AB033085
EMBL:BC146785 EMBL:AL137280 IPI:IPI00008091 PIR:T46350
RefSeq:NP_060023.1 UniGene:Hs.292949 ProteinModelPortal:Q9ULG1
SMR:Q9ULG1 DIP:DIP-34296N IntAct:Q9ULG1 STRING:Q9ULG1
PhosphoSite:Q9ULG1 DMDM:114149322 PaxDb:Q9ULG1 PRIDE:Q9ULG1
Ensembl:ENST00000361937 Ensembl:ENST00000401393 GeneID:54617
KEGG:hsa:54617 UCSC:uc001zni.3 GeneCards:GC15M041271
HGNC:HGNC:26956 MIM:610169 neXtProt:NX_Q9ULG1 PharmGKB:PA162392040
HOGENOM:HOG000231795 HOVERGEN:HBG057875 InParanoid:Q9ULG1
OMA:KVIRKFW OrthoDB:EOG4ZKJKF GenomeRNAi:54617 NextBio:57137
ArrayExpress:Q9ULG1 Bgee:Q9ULG1 CleanEx:HS_INO80
Genevestigator:Q9ULG1 GermOnline:ENSG00000128908 Uniprot:Q9ULG1
Length = 1556
Score = 464 (168.4 bits), Expect = 3.0e-60, Sum P(2) = 3.0e-60
Identities = 115/317 (36%), Positives = 166/317 (52%)
Query: 248 QLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPL 307
+L YQL+G+NWL + Q I+ ILADEMGLGKT+Q+I L L + + GPFL+ +P
Sbjct: 517 KLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISPA 576
Query: 308 STIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFH 367
ST+ NW +EF + P F V+ Y G+ R V+R W + + FH
Sbjct: 577 STLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRF---WSQKT--------LYTQDAPFH 625
Query: 368 VLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXX 427
V++TSY+L+ DV ++W +V+DEA LKS+ S +K L + +N+LLLTGTP
Sbjct: 626 VVITSYQLVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQ 685
Query: 428 XXXXXXXXXXXXXTPEKFNDLTSFQAEFA-DISK---------EEQVKRLHDLLGPHMLR 477
P F+ F F+ DI E Q+ RLH +L P MLR
Sbjct: 686 NTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLR 745
Query: 478 RLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTR-NFEAL--NPKGGGQQV-----SL 529
R+K DV + K E ++ +L+ QK Y+ + + + E L + G QQ SL
Sbjct: 746 RIKKDVENELSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQNTTSSL 805
Query: 530 LNIMMDLKKCCNHPYLF 546
+N++M +K CNHP LF
Sbjct: 806 MNLVMQFRKVCNHPELF 822
Score = 244 (91.0 bits), Expect = 3.0e-60, Sum P(2) = 3.0e-60
Identities = 50/94 (53%), Positives = 64/94 (68%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
+ MT+M+D+LE+Y+ + Y R+DG+ S R++ + F FVFLLSTR+GGL
Sbjct: 1123 YSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDMVADFQNRN-DIFVFLLSTRAGGL 1181
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ 737
GINL ADTVI YDSDWNP D QA RAHR+GQ
Sbjct: 1182 GINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQ 1215
Score = 210 (79.0 bits), Expect = 1.1e-56, Sum P(2) = 1.1e-56
Identities = 43/94 (45%), Positives = 57/94 (60%)
Query: 718 SDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 777
+D+ NDI F + R G INL ADTVI YDSDWNP D QA RAHR+GQ +
Sbjct: 1161 ADFQNRNDIFVFLLSTRAGGLG--INLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ 1218
Query: 778 VMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPG 811
V +YR + + ++EER+ Q AK K + +V+ G
Sbjct: 1219 VTVYRLICKGTIEERILQRAKEKSEIQRMVISGG 1252
>UNIPROTKB|F1PKX5 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000045 "regulation of G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0071479 "cellular response to
ionizing radiation" evidence=IEA] [GO:0070914 "UV-damage excision
repair" evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:AAEX03016071 RefSeq:XP_849183.1
Ensembl:ENSCAFT00000015097 GeneID:478262 KEGG:cfa:478262
Uniprot:F1PKX5
Length = 1560
Score = 464 (168.4 bits), Expect = 3.0e-60, Sum P(2) = 3.0e-60
Identities = 115/317 (36%), Positives = 166/317 (52%)
Query: 248 QLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPL 307
+L YQL+G+NWL + Q I+ ILADEMGLGKT+Q+I L L + + GPFL+ +P
Sbjct: 520 KLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISPA 579
Query: 308 STIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFH 367
ST+ NW +EF + P F V+ Y G+ R V+R W + + FH
Sbjct: 580 STLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRF---WSQKT--------LYTQDAPFH 628
Query: 368 VLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXX 427
V++TSY+L+ DV ++W +V+DEA LKS+ S +K L + +N+LLLTGTP
Sbjct: 629 VVITSYQLVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQ 688
Query: 428 XXXXXXXXXXXXXTPEKFNDLTSFQAEFA-DISK---------EEQVKRLHDLLGPHMLR 477
P F+ F F+ DI E Q+ RLH +L P MLR
Sbjct: 689 NTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLR 748
Query: 478 RLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTR-NFEAL--NPKGGGQQV-----SL 529
R+K DV + K E ++ +L+ QK Y+ + + + E L + G QQ SL
Sbjct: 749 RIKKDVENELSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQTTTSSL 808
Query: 530 LNIMMDLKKCCNHPYLF 546
+N++M +K CNHP LF
Sbjct: 809 MNLVMQFRKVCNHPELF 825
Score = 244 (91.0 bits), Expect = 3.0e-60, Sum P(2) = 3.0e-60
Identities = 50/94 (53%), Positives = 64/94 (68%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
+ MT+M+D+LE+Y+ + Y R+DG+ S R++ + F FVFLLSTR+GGL
Sbjct: 1127 YSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDMVADFQNRN-DIFVFLLSTRAGGL 1185
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ 737
GINL ADTVI YDSDWNP D QA RAHR+GQ
Sbjct: 1186 GINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQ 1219
Score = 210 (79.0 bits), Expect = 1.1e-56, Sum P(2) = 1.1e-56
Identities = 43/94 (45%), Positives = 57/94 (60%)
Query: 718 SDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 777
+D+ NDI F + R G INL ADTVI YDSDWNP D QA RAHR+GQ +
Sbjct: 1165 ADFQNRNDIFVFLLSTRAGGLG--INLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ 1222
Query: 778 VMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPG 811
V +YR + + ++EER+ Q AK K + +V+ G
Sbjct: 1223 VTVYRLICKGTIEERILQRAKEKSEIQRMVISGG 1256
>UNIPROTKB|F1SSV0 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000045 "regulation of G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:FP015925 RefSeq:XP_003121636.1 UniGene:Ssc.45003
Ensembl:ENSSSCT00000005252 GeneID:100517567 KEGG:ssc:100517567
Uniprot:F1SSV0
Length = 1566
Score = 464 (168.4 bits), Expect = 3.0e-60, Sum P(2) = 3.0e-60
Identities = 115/317 (36%), Positives = 166/317 (52%)
Query: 248 QLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPL 307
+L YQL+G+NWL + Q I+ ILADEMGLGKT+Q+I L L + + GPFL+ +P
Sbjct: 526 KLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISPA 585
Query: 308 STIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFH 367
ST+ NW +EF + P F V+ Y G+ R V+R W + + FH
Sbjct: 586 STLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRF---WSQKT--------LYTQDAPFH 634
Query: 368 VLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXX 427
V++TSY+L+ DV ++W +V+DEA LKS+ S +K L + +N+LLLTGTP
Sbjct: 635 VVITSYQLVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQ 694
Query: 428 XXXXXXXXXXXXXTPEKFNDLTSFQAEFA-DISK---------EEQVKRLHDLLGPHMLR 477
P F+ F F+ DI E Q+ RLH +L P MLR
Sbjct: 695 NTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLR 754
Query: 478 RLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTR-NFEAL--NPKGGGQQV-----SL 529
R+K DV + K E ++ +L+ QK Y+ + + + E L + G QQ SL
Sbjct: 755 RIKKDVENELSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQTTTSSL 814
Query: 530 LNIMMDLKKCCNHPYLF 546
+N++M +K CNHP LF
Sbjct: 815 MNLVMQFRKVCNHPELF 831
Score = 244 (91.0 bits), Expect = 3.0e-60, Sum P(2) = 3.0e-60
Identities = 50/94 (53%), Positives = 64/94 (68%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
+ MT+M+D+LE+Y+ + Y R+DG+ S R++ + F FVFLLSTR+GGL
Sbjct: 1133 YSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDMVADFQNRN-DIFVFLLSTRAGGL 1191
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ 737
GINL ADTVI YDSDWNP D QA RAHR+GQ
Sbjct: 1192 GINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQ 1225
Score = 210 (79.0 bits), Expect = 1.1e-56, Sum P(2) = 1.1e-56
Identities = 43/94 (45%), Positives = 57/94 (60%)
Query: 718 SDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 777
+D+ NDI F + R G INL ADTVI YDSDWNP D QA RAHR+GQ +
Sbjct: 1171 ADFQNRNDIFVFLLSTRAGGLG--INLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ 1228
Query: 778 VMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPG 811
V +YR + + ++EER+ Q AK K + +V+ G
Sbjct: 1229 VTVYRLICKGTIEERILQRAKEKSEIQRMVISGG 1262
>UNIPROTKB|F1N8K8 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:AADN02065411
EMBL:AADN02065412 EMBL:AADN02065413 IPI:IPI00588290
Ensembl:ENSGALT00000023601 ArrayExpress:F1N8K8 Uniprot:F1N8K8
Length = 1804
Score = 377 (137.8 bits), Expect = 3.2e-60, Sum P(4) = 3.2e-60
Identities = 79/176 (44%), Positives = 111/176 (63%)
Query: 236 EKQPPFLDD-TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKE 294
+KQP ++ ++L YQL G+ WL +SW + ILADEMGLGKTIQTI+FL LF E
Sbjct: 464 KKQPSYIGGHESLELRDYQLNGL-WLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHE 522
Query: 295 GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGG 354
GPFL+ PLST+ +W+RE +TWAP V Y+GD R ++R H+ W
Sbjct: 523 HQLYGPFLLVVPLSTLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHE--WMH------ 574
Query: 355 KPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFL 410
P ++ +KF++LLT+YE++ D + LG + WA + VDEAHRLK++ S +K L
Sbjct: 575 -P---QTKRLKFNILLTTYEILLKDKSFLGGLNWAFIGVDEAHRLKNDDSLLYKTL 626
Score = 367 (134.2 bits), Expect = 4.2e-59, Sum P(4) = 4.2e-59
Identities = 93/266 (34%), Positives = 141/266 (53%)
Query: 360 RSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKL 419
++ +KF++LLT+YE++ D + LG + WA + VDEAHRLK++ S +K L I
Sbjct: 576 QTKRLKFNILLTTYEILLKDKSFLGGLNWAFIGVDEAHRLKNDDSLLYKTL----IDLVT 631
Query: 420 LLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRL 479
+ + T PEKF+ F+ E +E LH L P +LRR+
Sbjct: 632 IDSDTAPSCTIPQELWLLHFIMPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRV 690
Query: 480 KADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKC 539
K DV K++P+K E I+R+E+S +QK+YYK+ILTRN++AL+ G LNIMM+LKKC
Sbjct: 691 KKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKC 750
Query: 540 CNHPYLFPAAAEEAPVQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHRYGIKPEWLIAN 599
CNH YL ++ Q +Q L R++G E G+R LI +
Sbjct: 751 CNHCYLIKPP-DDNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRV------LIFS 803
Query: 600 RVINSKTLRDGSTIYLVKWRDLPYDK 625
+++ + D YL K+R P+ +
Sbjct: 804 QMVR---MLDILAEYL-KYRQFPFQR 825
Score = 326 (119.8 bits), Expect = 3.2e-60, Sum P(4) = 3.2e-60
Identities = 59/101 (58%), Positives = 81/101 (80%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M +MLDIL +YL + ++R+DG+I G +R++++D FNA G+ F FLLSTR+GGL
Sbjct: 802 FSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGL 861
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINL 744
GINLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ K +N+
Sbjct: 862 GINLASADTVVIFDSDWNPQNDLQAQARAHRIGQK-KQVNI 901
Score = 250 (93.1 bits), Expect = 2.5e-52, Sum P(4) = 2.5e-52
Identities = 55/102 (53%), Positives = 70/102 (68%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INLA+ADTV+I+DSDWNP ND+QA +RAHRIGQ+ +V IYR VT+ SVEE + + AK+KM
Sbjct: 863 INLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKM 922
Query: 802 MLTHLVV-RPGMGGK-----------QANFTKQELDDILRFG 831
+L HLV+ R GK F K+EL IL+FG
Sbjct: 923 VLDHLVIQRMDTTGKTVLHTGSTPSSSTPFNKEELSAILKFG 964
Score = 71 (30.1 bits), Expect = 3.2e-60, Sum P(4) = 3.2e-60
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 119 HNINDEELEKKYYRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWED 174
+N E + + +Y I E +IA+ N K+ G Y KW+ LPY + +WED
Sbjct: 371 YNCQQELTDDLHKQYQIV-ERIIAHS--NQKSAA-GYPDYYCKWQGLPYSECSWED 422
Score = 69 (29.3 bits), Expect = 1.8e-26, Sum P(4) = 1.8e-26
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 594 EWLIANRVI---NSKTLRDGSTIYLVKWRDLPYDKATWED 630
++ I R+I N K+ G Y KW+ LPY + +WED
Sbjct: 384 QYQIVERIIAHSNQKSAA-GYPDYYCKWQGLPYSECSWED 422
Score = 56 (24.8 bits), Expect = 1.2e-58, Sum P(4) = 1.2e-58
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 148 SKTLRDGSTIYLVKWRDLPYDKATWEDEN----EDIPGLKE 184
SK L G YL+KW+ + TWE E +++ G+K+
Sbjct: 307 SKEL--GEIQYLIKWKGWSHIHNTWETEETLKQQNVKGMKK 345
Score = 56 (24.8 bits), Expect = 4.5e-24, Sum P(3) = 4.5e-24
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 604 SKTLRDGSTIYLVKWRDLPYDKATWEDEN----EDIPGLKE 640
SK L G YL+KW+ + TWE E +++ G+K+
Sbjct: 307 SKEL--GEIQYLIKWKGWSHIHNTWETEETLKQQNVKGMKK 345
Score = 38 (18.4 bits), Expect = 3.2e-60, Sum P(4) = 3.2e-60
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 867 HHYEQHQEDVSRTLGKGKR 885
HH ++HQ D + KR
Sbjct: 1644 HHKDRHQGDAYKKSDSRKR 1662
>UNIPROTKB|Q9HBD4 [details] [associations]
symbol:SMARCA4 "SMARCA4 isoform 2" species:9606 "Homo
sapiens" [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst
growth" evidence=IEA] [GO:0001835 "blastocyst hatching"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005719 "nuclear
euchromatin" evidence=IEA] [GO:0005726 "perichromatin fibrils"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030900 "forebrain development" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0043388 "positive regulation of DNA binding" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0048730 "epidermis morphogenesis" evidence=IEA]
[GO:0060318 "definitive erythrocyte differentiation" evidence=IEA]
[GO:0060347 "heart trabecula formation" evidence=IEA] [GO:0071564
"npBAF complex" evidence=IEA] [GO:0071565 "nBAF complex"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
EMBL:CH471106 GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792
GO:GO:0060347 GO:GO:0043966 GO:GO:0043388 KO:K11647
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:AC011442
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 EMBL:AC011485
GO:GO:0005726 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
CTD:6597 EMBL:AF254822 EMBL:AC006127 UniGene:Hs.327527 GeneID:6597
KEGG:hsa:6597 HGNC:HGNC:11100 PharmGKB:PA35950 ChiTaRS:SMARCA4
GenomeRNAi:6597 NextBio:25661 IPI:IPI00900269 RefSeq:NP_001122321.1
SMR:Q9HBD4 STRING:Q9HBD4 Ensembl:ENST00000358026 UCSC:uc010dxo.3
Uniprot:Q9HBD4
Length = 1679
Score = 311 (114.5 bits), Expect = 3.2e-60, Sum P(4) = 3.2e-60
Identities = 67/147 (45%), Positives = 92/147 (62%)
Query: 610 GSTIYLVKWRDLPYDKATWEDENEDIPGLKES----IEFYNMTKMLDILEDYLDGEGYKY 665
G T +V+ DL +E + +P L+ + + F MT ++ I+EDY G+KY
Sbjct: 1064 GFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKY 1123
Query: 666 ERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWNPHND 725
R+DG R + FN PG+ F+FLLSTR+GGLG+NL +ADTVII+DSDWNPH D
Sbjct: 1124 LRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQD 1183
Query: 726 IQAFSRAHRIGQQN--KYINLATADTV 750
+QA RAHRIGQQN + + L T ++V
Sbjct: 1184 LQAQDRAHRIGQQNEVRVLRLCTVNSV 1210
Score = 240 (89.5 bits), Expect = 3.2e-60, Sum P(4) = 3.2e-60
Identities = 60/175 (34%), Positives = 96/175 (54%)
Query: 350 ANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKF 409
A R P ++RS KF+VLLT+YE I D +L I W ++VDE HR+K++ K +
Sbjct: 840 ARRAFVP-QLRSG--KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQV 896
Query: 410 LSG-YSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQ----AEFA------DI 458
L+ Y +LLLTGTP P F ++F+ A FA D+
Sbjct: 897 LNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDL 956
Query: 459 SKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYI 510
++EE + +RLH +L P +LRRLK +V +P K E++++ ++S +Q+ Y+++
Sbjct: 957 NEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHM 1011
Score = 221 (82.9 bits), Expect = 3.2e-60, Sum P(4) = 3.2e-60
Identities = 45/104 (43%), Positives = 63/104 (60%)
Query: 233 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 292
++ +KQ + + G+ L YQ++G+ WL + N++ ILADEMGLGKTIQTI + L
Sbjct: 740 ERVDKQSALMVN-GV-LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLM 797
Query: 293 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR 336
+ GPFL+ PLST+ NW EF+ WAP V+Y G R
Sbjct: 798 EHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR 841
Score = 219 (82.2 bits), Expect = 3.2e-50, Sum P(4) = 3.2e-50
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL +ADTVII+DSDWNPH D+QA RAHRIGQQN+V + R T NSVEE++ AK K+
Sbjct: 1163 LNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKL 1222
Query: 802 MLTHLVVRPGM 812
+ V++ GM
Sbjct: 1223 NVDQKVIQAGM 1233
Score = 190 (71.9 bits), Expect = 5.1e-55, Sum P(4) = 5.1e-55
Identities = 47/139 (33%), Positives = 78/139 (56%)
Query: 445 FNDLTSFQAEFADISKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSP 501
FN + E D+++EE + +RLH +L P +LRRLK +V +P K E++++ ++S
Sbjct: 943 FNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSA 1002
Query: 502 MQKKYYKY------ILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFP----AAAE 551
+Q+ Y++ +LT E + KG G +L+N +M L+K CNHPY+F + +E
Sbjct: 1003 LQRVLYRHMQAKGVLLTDGSEK-DKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSE 1061
Query: 552 EAPVQGGQYEIQALTRAAG 570
GG + L RA+G
Sbjct: 1062 HLGFTGGIVQGLDLYRASG 1080
Score = 43 (20.2 bits), Expect = 3.2e-60, Sum P(4) = 3.2e-60
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 908 TGRRSAKKKEMSKQERDRPLPP 929
T RS K + SK+++ R PP
Sbjct: 1458 TSTRSRDKDDESKKQKKRGRPP 1479
>ASPGD|ASPL0000047400 [details] [associations]
symbol:AN2285 species:162425 "Emericella nidulans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0042766 "nucleosome
mobilization" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0043486 "histone exchange" evidence=IEA] [GO:0006348 "chromatin
silencing at telomere" evidence=IEA] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043618 "regulation of transcription from RNA
polymerase II promoter in response to stress" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 EMBL:BN001307 GO:GO:0006281
GO:GO:0006351 GO:GO:0016568 GO:GO:0004386 EMBL:AACD01000038
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11665 RefSeq:XP_659889.1 ProteinModelPortal:Q5BAZ5
STRING:Q5BAZ5 EnsemblFungi:CADANIAT00008977 GeneID:2874790
KEGG:ani:AN2285.2 HOGENOM:HOG000048482 OMA:LYFQMTR
OrthoDB:EOG41G6C8 Uniprot:Q5BAZ5
Length = 1612
Score = 445 (161.7 bits), Expect = 3.3e-60, Sum P(2) = 3.3e-60
Identities = 113/322 (35%), Positives = 171/322 (53%)
Query: 248 QLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPL 307
+L YQL+G+NWL + Q I+ ILADEMGLGKTIQ+I+ + L + + GPFLV AP
Sbjct: 797 KLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTIQSISVMAYLAEVHNIWGPFLVIAPA 856
Query: 308 STIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFH 367
ST+ NW++E + P+ V+ Y G+ R +LR W+ K + +FH
Sbjct: 857 STLHNWQQEITKFVPNIKVLPYWGNAKDRKILRKF---WDR------KHITYTKES-EFH 906
Query: 368 VLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXX 427
VL+TSY+L+ D ++W +++DEA +KS+QS +K L G+ +N+LLLTGTP
Sbjct: 907 VLVTSYQLVVLDAQYFQKVKWQYMILDEAQAIKSSQSSRWKSLLGFHCRNRLLLTGTPIQ 966
Query: 428 XXXXXXXXXXXXXTPEKFNDLTSFQAEFA-DISK---------EEQVKRLHDLLGPHMLR 477
P F+ F F+ DI E+Q++RLH +L P MLR
Sbjct: 967 NNMQELWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLRRLHMILKPFMLR 1026
Query: 478 RLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRN--FEALNPKGGGQQV---SLLNI 532
R+K V + + K E V +L+ Q+ Y + R + + G + +L+N+
Sbjct: 1027 RVKKHVQQELGDKVEKDVFCDLTYRQRALYTNLRNRVSIMDLIEKAAVGDETDSTTLMNL 1086
Query: 533 MMDLKKCCNHPYLFPAAAEEAP 554
+M +K CNHP LF A ++P
Sbjct: 1087 VMQFRKVCNHPDLFERAETKSP 1108
Score = 264 (98.0 bits), Expect = 3.3e-60, Sum P(2) = 3.3e-60
Identities = 55/109 (50%), Positives = 71/109 (65%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
++ MT+M+D++E+YL YKY R+DG+ R++++ F FVFLLSTR+GGL
Sbjct: 1343 YFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQQR-PDIFVFLLSTRAGGL 1401
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ--QNKYINLATADTV 750
GINL ADTVI YDSDWNP D QA RAHR+GQ Q L T T+
Sbjct: 1402 GINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRSTI 1450
Score = 206 (77.6 bits), Expect = 4.2e-54, Sum P(2) = 4.2e-54
Identities = 43/97 (44%), Positives = 59/97 (60%)
Query: 718 SDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 777
+D+ DI F + R G INL ADTVI YDSDWNP D QA RAHR+GQ +
Sbjct: 1381 ADFQQRPDIFVFLLSTRAGGLG--INLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQ 1438
Query: 778 VMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGG 814
V +YR +TR+++EER+ + A +K + +V+ G G
Sbjct: 1439 VTVYRLITRSTIEERIRKRALQKEEVQRVVISGGAAG 1475
>ZFIN|ZDB-GENE-030131-9923 [details] [associations]
symbol:hells "helicase, lymphoid-specific"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0045132 "meiotic chromosome segregation"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR011515 Pfam:PF00176 Pfam:PF00271
Pfam:PF07557 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-9923 GO:GO:0005524 GO:GO:0005634 GO:GO:0000775
GO:GO:0003677 GO:GO:0004386 GO:GO:0045132 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 CTD:3070 HOVERGEN:HBG060049
EMBL:AY612850 IPI:IPI00817585 RefSeq:NP_001032178.1
UniGene:Dr.75180 ProteinModelPortal:Q3BDS6 STRING:Q3BDS6
GeneID:553328 KEGG:dre:553328 InParanoid:Q3BDS6 NextBio:20880094
ArrayExpress:Q3BDS6 Uniprot:Q3BDS6
Length = 853
Score = 388 (141.6 bits), Expect = 1.1e-59, Sum P(3) = 1.1e-59
Identities = 107/296 (36%), Positives = 151/296 (51%)
Query: 237 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 296
+QP TG + YQ+EGI WLR W I+ ILADEMGLGKTIQ I + ++ E
Sbjct: 223 QQPQLF--TGGVMRWYQVEGIEWLRMLWENGINGILADEMGLGKTIQCIAHI-AMMVEKK 279
Query: 297 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKP 356
GPFLV APLST+ NW EF+ + P+ V+ Y G + R+ D+ + ++G
Sbjct: 280 VLGPFLVVAPLSTLPNWISEFKRFTPEVSVLLYHGPQKERL-----DLVKKIRQHQGS-- 332
Query: 357 CRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQ 416
+R V ++TS+E+ D L W L+VDE HR+K+ + + L
Sbjct: 333 --LRMCPV----VVTSFEIAMRDRKFLQRFHWNYLIVDEGHRIKNLNCRLVQELKMLPTD 386
Query: 417 NKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADIS------------KEEQ- 463
NKLLLTGTP P+ F+DL SF++ F DIS + EQ
Sbjct: 387 NKLLLTGTPLQNNLSELWSLLNFLLPDVFDDLKSFESWF-DISTITSDAENIVANEREQN 445
Query: 464 -VKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEAL 518
+ LH +L P +LRRLK+DV +P K E +V L+ Q+ +Y I+ + L
Sbjct: 446 ILHMLHLILTPFLLRRLKSDVTLEVPPKKEIVVYAPLTNKQEAFYMAIVNKTIAKL 501
Score = 280 (103.6 bits), Expect = 1.1e-59, Sum P(3) = 1.1e-59
Identities = 57/109 (52%), Positives = 77/109 (70%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MT +LDIL DY GY+Y R+DG+++ + R E++ +F++ F+FLLSTR+GGL
Sbjct: 637 FSQMTSILDILMDYCYLRGYEYSRLDGSMSYADRDENMKKFSSD-PEVFLFLLSTRAGGL 695
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYI--NLATADTV 750
GINL +ADTVII+DSDWNP D+QA R HRIGQ + L TA+T+
Sbjct: 696 GINLTSADTVIIFDSDWNPQADLQAQDRCHRIGQTKPVVVHRLITANTI 744
Score = 187 (70.9 bits), Expect = 6.0e-50, Sum P(3) = 6.0e-50
Identities = 33/67 (49%), Positives = 48/67 (71%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INL +ADTVII+DSDWNP D+QA R HRIGQ V+++R +T N+++E++ + A K
Sbjct: 697 INLTSADTVIIFDSDWNPQADLQAQDRCHRIGQTKPVVVHRLITANTIDEKILERASAKR 756
Query: 802 MLTHLVV 808
L +V+
Sbjct: 757 KLEKMVI 763
Score = 74 (31.1 bits), Expect = 1.1e-59, Sum P(3) = 1.1e-59
Identities = 20/63 (31%), Positives = 30/63 (47%)
Query: 527 VSLLNIMMDLKKCCNHPYLFPAAAEEAPVQGGQYEI-QALTRAAGXXXXXXXXXXXXXED 585
+ L NI+M LK+CCNH YL + P G ++I + L A+G +
Sbjct: 574 LKLQNILMLLKRCCNHAYLIEYPLD--PTTG-DFKIDEQLVEASGKFLILDRMLPELKKR 630
Query: 586 GHR 588
GH+
Sbjct: 631 GHK 633
>UNIPROTKB|Q3B7N1 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9913 "Bos taurus" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=ISS] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 GO:GO:0006974 GO:GO:0016887
GO:GO:0006338 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154
GO:GO:0008026 EMBL:BC107534 IPI:IPI00710168 RefSeq:NP_001032909.1
UniGene:Bt.18335 ProteinModelPortal:Q3B7N1 PRIDE:Q3B7N1
GeneID:524787 KEGG:bta:524787 CTD:9557 HOGENOM:HOG000030789
HOVERGEN:HBG077542 InParanoid:Q3B7N1 OrthoDB:EOG4SXNBV
NextBio:20874039 Uniprot:Q3B7N1
Length = 897
Score = 394 (143.8 bits), Expect = 1.2e-59, Sum P(2) = 1.2e-59
Identities = 110/322 (34%), Positives = 158/322 (49%)
Query: 245 TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVS 304
TG+ L YQL+G+NWL + IL DEMGLGKT QTI L + +GPFL+
Sbjct: 44 TGIHLRPYQLQGVNWLAQCFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLIL 103
Query: 305 APLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTV 364
PLS + NW+ E E +AP VTY GDKD R L+ D+ E + I
Sbjct: 104 CPLSVLSNWKEEMERFAPGLSCVTYAGDKDKRACLQQ-DLKQESRFHVLLTTYEICLKDA 162
Query: 365 KFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFL-SGYSIQNKLLLTG 423
F L+ ++ L + + ++L H+ S S F L +G IQN L
Sbjct: 163 SFLKSFPWSVLVVDEAHRLKN-QSSLL-----HKTLSEFSVVFSLLLTGTPIQNSL---- 212
Query: 424 TPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKE-EQVKRLHDLLGPHMLRRLKAD 482
+ E+ D F + DI KE E L+ LL P +LRR+KA+
Sbjct: 213 --QELYSLLSFVEPDLFSKEQVED---FVQRYQDIEKESESASELYKLLQPFLLRRVKAE 267
Query: 483 VLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNH 542
V +P K+E ++ +S +QKKYYK IL ++ +A + ++V L N++ L+KC +H
Sbjct: 268 VATELPRKTEVVIYHGMSALQKKYYKAILMKDLDAFENETA-KKVKLQNVLSQLRKCVDH 326
Query: 543 PYLFPAAAEEAPVQGGQYEIQA 564
PYLF E P + G + I+A
Sbjct: 327 PYLFDGVEPE-PFEIGDHLIEA 347
Score = 303 (111.7 bits), Expect = 1.2e-59, Sum P(2) = 1.2e-59
Identities = 64/114 (56%), Positives = 78/114 (68%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MT+MLDIL+DYLD GY YER+DG++ G R +I F F FLLSTR+GG+
Sbjct: 371 FSQMTQMLDILQDYLDYRGYSYERVDGSVRGEERHLAIKNFGQQPI--FTFLLSTRAGGV 428
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV--IIY 753
G+NL ADTVI +DSD+NP ND+QA +RAHRIGQ K I L DTV I+Y
Sbjct: 429 GMNLTAADTVIFFDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVY 482
Score = 202 (76.2 bits), Expect = 5.1e-49, Sum P(2) = 5.1e-49
Identities = 47/125 (37%), Positives = 68/125 (54%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL ADTVI +DSD+NP ND+QA +RAHRIGQ V + R + R++VEE V + A K+
Sbjct: 430 MNLTAADTVIFFDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKL 489
Query: 802 MLTHLVVRPG---MGG-KQANFTKQELDDILRFGTXXXXXXXXXXXXXXXIIKQEAENQD 857
LT+ ++ G +G K A +L +IL+FG + E +D
Sbjct: 490 QLTNTIIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLSSEGSTMHEIDLKSILGETED 549
Query: 858 PAYWV 862
+WV
Sbjct: 550 -GHWV 553
>UNIPROTKB|Q86WJ1 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=IMP] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006200 "ATP
catabolic process" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 EMBL:AL356378 GO:GO:0006338
GO:GO:0004003 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154
CTD:9557 HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV EMBL:AF537213
EMBL:AK001342 EMBL:AK027631 EMBL:EF560738 EMBL:BC001171
EMBL:BC005038 EMBL:BC008649 EMBL:BC043501 EMBL:BC077717
EMBL:AK223496 IPI:IPI00329088 IPI:IPI00854584 IPI:IPI00890729
IPI:IPI00890749 RefSeq:NP_001243265.1 RefSeq:NP_001243266.1
RefSeq:NP_001243267.1 RefSeq:NP_004275.4 RefSeq:NP_078844.2
RefSeq:XP_003960255.1 RefSeq:XP_003960264.1 UniGene:Hs.191164
ProteinModelPortal:Q86WJ1 SMR:Q86WJ1 DIP:DIP-48933N IntAct:Q86WJ1
STRING:Q86WJ1 PhosphoSite:Q86WJ1 DMDM:311033359 PaxDb:Q86WJ1
PRIDE:Q86WJ1 Ensembl:ENST00000369258 Ensembl:ENST00000369259
Ensembl:ENST00000431239 Ensembl:ENST00000579763
Ensembl:ENST00000583055 GeneID:101060601 GeneID:9557
KEGG:hsa:101060601 KEGG:hsa:9557 UCSC:uc001epm.4 UCSC:uc001epo.4
UCSC:uc009wjh.3 GeneCards:GC01P146717 H-InvDB:HIX0000988
H-InvDB:HIX0028745 HGNC:HGNC:1916 HPA:HPA027789 HPA:HPA028670
MIM:613039 neXtProt:NX_Q86WJ1 PharmGKB:PA26452 InParanoid:Q86WJ1
OMA:TCQTIAL PhylomeDB:Q86WJ1 ChiTaRS:CHD1L GenomeRNAi:9557
NextBio:35849 ArrayExpress:Q86WJ1 Bgee:Q86WJ1 CleanEx:HS_CHD1L
Genevestigator:Q86WJ1 Uniprot:Q86WJ1
Length = 897
Score = 394 (143.8 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 110/322 (34%), Positives = 158/322 (49%)
Query: 245 TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVS 304
TG+ L +YQLEG+NWL + IL DEMGLGKT QTI L + +GPFL+
Sbjct: 42 TGIHLRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLIL 101
Query: 305 APLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTV 364
PLS + NW+ E + +AP VTY GDK+ R L+ D+ E + I
Sbjct: 102 CPLSVLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQ-DLKQESRFHVLLTTYEICLKDA 160
Query: 365 KFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFL-SGYSIQNKLLLTG 423
F L+ ++ L + + ++L H+ S S F L +G IQN L
Sbjct: 161 SFLKSFPWSVLVVDEAHRLKN-QSSLL-----HKTLSEFSVVFSLLLTGTPIQNSL---- 210
Query: 424 TPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKE-EQVKRLHDLLGPHMLRRLKAD 482
+ E+ D F + DI KE E LH LL P +LRR+KA+
Sbjct: 211 --QELYSLLSFVEPDLFSKEEVGD---FIQRYQDIEKESESASELHKLLQPFLLRRVKAE 265
Query: 483 VLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNH 542
V +P K+E ++ +S +QKKYYK IL ++ +A + ++V L NI+ L+KC +H
Sbjct: 266 VATELPKKTEVVIYHGMSALQKKYYKAILMKDLDAFENETA-KKVKLQNILSQLRKCVDH 324
Query: 543 PYLFPAAAEEAPVQGGQYEIQA 564
PYLF E P + G + +A
Sbjct: 325 PYLFDGVEPE-PFEVGDHLTEA 345
Score = 301 (111.0 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 64/114 (56%), Positives = 78/114 (68%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MT+MLDIL+DY+D GY YER+DG++ G R +I F FVFLLSTR+GG+
Sbjct: 369 FSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQPI--FVFLLSTRAGGV 426
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV--IIY 753
G+NL ADTVI DSD+NP ND+QA +RAHRIGQ K I L DTV I+Y
Sbjct: 427 GMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVY 480
Score = 199 (75.1 bits), Expect = 1.1e-48, Sum P(2) = 1.1e-48
Identities = 43/94 (45%), Positives = 61/94 (64%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL ADTVI DSD+NP ND+QA +RAHRIGQ V + R + R++VEE V + A K+
Sbjct: 428 MNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKL 487
Query: 802 MLTHLVVRPG---MGG-KQANFTKQELDDILRFG 831
LT++++ G +G K A +L +IL+FG
Sbjct: 488 QLTNMIIEGGHFTLGAQKPAADADLQLSEILKFG 521
>FB|FBgn0000212 [details] [associations]
symbol:brm "brahma" species:7227 "Drosophila melanogaster"
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISS;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=NAS]
[GO:0003713 "transcription coactivator activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0048096
"chromatin-mediated maintenance of transcription" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0035060 "brahma
complex" evidence=IDA;TAS] [GO:0048477 "oogenesis" evidence=TAS]
[GO:0045749 "negative regulation of S phase of mitotic cell cycle"
evidence=IGI] [GO:0035172 "hemocyte proliferation" evidence=TAS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0007474 "imaginal disc-derived wing vein specification"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0007517 "muscle organ development" evidence=IMP] [GO:0048813
"dendrite morphogenesis" evidence=IMP] [GO:0006911 "phagocytosis,
engulfment" evidence=IMP] [GO:0007409 "axonogenesis" evidence=IMP]
[GO:0007480 "imaginal disc-derived leg morphogenesis" evidence=IGI]
[GO:0008586 "imaginal disc-derived wing vein morphogenesis"
evidence=IMP] [GO:0008587 "imaginal disc-derived wing margin
morphogenesis" evidence=IMP] [GO:0045742 "positive regulation of
epidermal growth factor receptor signaling pathway" evidence=IMP]
[GO:0070983 "dendrite guidance" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0043974 "histone H3-K27
acetylation" evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0045893 GO:GO:0006911 EMBL:AE014296 GO:GO:0003677
GO:GO:0008586 GO:GO:0007474 GO:GO:0048477 GO:GO:0006351
GO:GO:0016887 GO:GO:0007517 GO:GO:0007409 GO:GO:0004386
GO:GO:0045742 GO:GO:0007480 GO:GO:0045749 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0008587 KO:K11647 EMBL:M85049
EMBL:AY095048 EMBL:BT009972 PIR:A42091 RefSeq:NP_536745.4
RefSeq:NP_536746.1 RefSeq:NP_730088.1 RefSeq:NP_730089.1
UniGene:Dm.5356 ProteinModelPortal:P25439 SMR:P25439 DIP:DIP-36728N
IntAct:P25439 MINT:MINT-6541230 STRING:P25439 PaxDb:P25439
EnsemblMetazoa:FBtr0075525 EnsemblMetazoa:FBtr0075526 GeneID:39744
KEGG:dme:Dmel_CG5942 CTD:39744 FlyBase:FBgn0000212
GeneTree:ENSGT00550000074659 InParanoid:P25439 OMA:QKKYTIS
OrthoDB:EOG4K3JB3 PhylomeDB:P25439 ChiTaRS:SMARCA2 GenomeRNAi:39744
NextBio:815155 Bgee:P25439 GermOnline:CG5942 GO:GO:0035060
GO:GO:0070983 GO:GO:0035172 GO:GO:0043974 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 Uniprot:P25439
Length = 1638
Score = 307 (113.1 bits), Expect = 2.0e-59, Sum P(4) = 2.0e-59
Identities = 89/261 (34%), Positives = 134/261 (51%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MT+ + I+EDYL + Y R+DG R E + +FNA G+ FVFLLSTR+GGL
Sbjct: 1120 FCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGELLRKFNAKGSDVFVFLLSTRAGGL 1179
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV---IIYDSDWN 758
G+NL TADTV+I+DSDWNPH D+QA RAHRIGQ+N + + L T ++V I+ + +
Sbjct: 1180 GLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYK 1239
Query: 759 PHND---IQA--FSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMG 813
+ D IQA F + G + + + + ++ EE M+ ++ R
Sbjct: 1240 LNMDEKVIQAGMFDQKST-GSERQQFLQTILHQDDNEEEEENEVPDDEMINMMIAR---- 1294
Query: 814 GKQANFTKQELDDILRFGTXXXXXXXXXXXXXXXIIKQEAENQDPAYWV-----KLLRHH 868
+++E++ R +I E+E D W+ ++ R H
Sbjct: 1295 ------SEEEIEIFKRMDAERKKEDEEIHPGRERLI-DESELPD---WLTKDDDEVERFH 1344
Query: 869 YEQHQEDVSRTLGKGKRVRKQ 889
Y Q+ ED LG+G R RK+
Sbjct: 1345 Y-QYDEDT--ILGRGSRQRKE 1362
Score = 242 (90.2 bits), Expect = 2.0e-59, Sum P(4) = 2.0e-59
Identities = 55/163 (33%), Positives = 94/163 (57%)
Query: 365 KFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQN-KLLLTG 423
KF+VLLT+YE + D A+L I+W +++DE HR+K++ K + L+ + I +LLLTG
Sbjct: 871 KFNVLLTTYEYVIKDKAVLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPYRLLLTG 930
Query: 424 TPXXXXXXXXXXXXXXXTPEKFNDLTSFQ----AEFA------DISKEEQV---KRLHDL 470
TP P F ++F+ A FA ++++EE + +RLH +
Sbjct: 931 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 990
Query: 471 LGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTR 513
L P +LRRLK +V +P K E+I++ ++S +Q+ YK++ ++
Sbjct: 991 LRPFLLRRLKKEVEHQLPDKVEYIIKCDMSALQRVLYKHMQSK 1033
Score = 219 (82.2 bits), Expect = 2.0e-59, Sum P(4) = 2.0e-59
Identities = 44/93 (47%), Positives = 59/93 (63%)
Query: 249 LHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLS 308
L YQ++G+ WL + N++ ILADEMGLGKTIQTI+ + L GP+L+ PLS
Sbjct: 773 LKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTISLVTYLMDRKKVMGPYLIIVPLS 832
Query: 309 TIINWEREFETWAPDFYVVTYVGDKDCRIVLRD 341
T+ NW EFE WAP VV+Y G R +L++
Sbjct: 833 TLPNWVLEFEKWAPAVGVVSYKGSPQGRRLLQN 865
Score = 172 (65.6 bits), Expect = 3.8e-52, Sum P(4) = 3.8e-52
Identities = 40/118 (33%), Positives = 70/118 (59%)
Query: 445 FNDLTSFQAEFADISKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSP 501
FN + E ++++EE + +RLH +L P +LRRLK +V +P K E+I++ ++S
Sbjct: 962 FNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVEHQLPDKVEYIIKCDMSA 1021
Query: 502 MQKKYYKY------ILTRNFE-ALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAAAEE 552
+Q+ YK+ +LT E + KGG + +L+N ++ L+K CNHP++F E+
Sbjct: 1022 LQRVLYKHMQSKGVLLTDGSEKGKHGKGGAK--ALMNTIVQLRKLCNHPFMFQHIEEK 1077
Score = 43 (20.2 bits), Expect = 1.0e-31, Sum P(4) = 1.0e-31
Identities = 21/84 (25%), Positives = 36/84 (42%)
Query: 599 NRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDYL 658
+ +IN R I + K D K EDE E PG + I+ + L +D +
Sbjct: 1285 DEMINMMIARSEEEIEIFKRMDAERKK---EDE-EIHPGRERLIDESELPDWLTKDDDEV 1340
Query: 659 DGEGYKYERIDGNITGSMRQESID 682
+ Y+Y+ GS +++ +D
Sbjct: 1341 ERFHYQYDEDTILGRGSRQRKEVD 1364
Score = 43 (20.2 bits), Expect = 6.0e-21, Sum P(3) = 6.0e-21
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 525 QQVSLLNIMMDLKKCCNHPYL 545
Q +SL+ +MD KK PYL
Sbjct: 807 QTISLVTYLMDRKKVMG-PYL 826
Score = 39 (18.8 bits), Expect = 2.0e-59, Sum P(4) = 2.0e-59
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 206 QEDEDGASGSKPRRYTPPPEKP 227
Q+ ++G+ P+ TPP P
Sbjct: 245 QQQPPPSAGTPPQCSTPPASNP 266
>WB|WBGene00007027 [details] [associations]
symbol:ssl-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0003677 GO:GO:0040011 GO:GO:0016568 GO:GO:0040035
GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427 KO:K11320
EMBL:AL132904 EMBL:AY551965 RefSeq:NP_001255179.1
RefSeq:NP_001255180.1 RefSeq:NP_001255181.1 RefSeq:NP_001255182.1
UniGene:Cel.203 ProteinModelPortal:Q9NEL2 SMR:Q9NEL2
MINT:MINT-3384018 PaxDb:Q9NEL2 EnsemblMetazoa:Y111B2A.22a
GeneID:190954 KEGG:cel:CELE_Y111B2A.22 UCSC:Y111B2A.22 CTD:190954
WormBase:Y111B2A.22a WormBase:Y111B2A.22b WormBase:Y111B2A.22c
WormBase:Y111B2A.22d InParanoid:Q9NEL2 OMA:HLACSES NextBio:947488
ArrayExpress:Q9NEL2 Uniprot:Q9NEL2
Length = 2395
Score = 276 (102.2 bits), Expect = 2.7e-59, Sum P(3) = 2.7e-59
Identities = 72/211 (34%), Positives = 107/211 (50%)
Query: 366 FHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTP 425
FHV +TSY+ +T D+ W L++DEA +K+ +S+ ++ L + +LLLTGTP
Sbjct: 658 FHVCITSYKTVTQDIRAFKQRAWQYLILDEAQNIKNWKSQRWQALLNVRARRRLLLTGTP 717
Query: 426 XXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADI---SKEEQVK-------RLHDLLGPHM 475
P F+ F+ F++ E ++ RLH +L P +
Sbjct: 718 LQNSLMELWSLMHFLMPTIFSSHDDFKDWFSNPLTGMMEGNMEFNAPLIGRLHKVLRPFI 777
Query: 476 LRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMD 535
LRRLK +V K +P K+E IV LS Q+ Y ++R N K G +S+LNI+M
Sbjct: 778 LRRLKKEVEKQLPEKTEHIVNCSLSKRQRYLYDDFMSRRSTKENLKSGNM-MSVLNIVMQ 836
Query: 536 LKKCCNHPYLFPAAAEEAP--VQGGQYEIQA 564
L+KCCNHP LF AP V+ Q ++ A
Sbjct: 837 LRKCCNHPNLFEPRPVVAPFVVEKLQLDVPA 867
Score = 268 (99.4 bits), Expect = 2.7e-59, Sum P(3) = 2.7e-59
Identities = 53/94 (56%), Positives = 64/94 (68%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M+KMLD+L+ +L GY+Y R+DG RQ ++RFNA F F+LSTRSGG+
Sbjct: 1210 FTQMSKMLDVLQTFLSHHGYQYFRLDGTTGVEQRQAMMERFNAD-PKVFCFILSTRSGGV 1268
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ 737
G+NL ADTVI YDSDWNP D QA R HRIGQ
Sbjct: 1269 GVNLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQ 1302
Score = 221 (82.9 bits), Expect = 2.7e-59, Sum P(3) = 2.7e-59
Identities = 60/162 (37%), Positives = 84/162 (51%)
Query: 171 TWEDENEDIPGLKESIEFYNXXXXXXXXXXXXXELQEDEDGASGSKPRRYTPPPEKPTTD 230
T ED N D G+ E++++ EL + A +P+ YT TT
Sbjct: 492 TAEDGNGDGHGVLENVDYVKLNSQDSDERQQ--ELANIAEEALKFQPKGYT----LETTQ 545
Query: 231 LRKKYEKQP-PFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLY 289
+ K P PFL G QL YQ+ G++W+ + +N++ ILADEMGLGKTIQTI+ L
Sbjct: 546 V-----KTPVPFLI-RG-QLREYQMVGLDWMVTLYEKNLNGILADEMGLGKTIQTISLLA 598
Query: 290 SLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVG 331
+ GP L+ P S I+NWE EF+ W P ++TY G
Sbjct: 599 HMACSESIWGPHLIVVPTSVILNWEMEFKKWCPALKILTYFG 640
Score = 176 (67.0 bits), Expect = 1.1e-49, Sum P(3) = 1.1e-49
Identities = 39/86 (45%), Positives = 48/86 (55%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL ADTVI YDSDWNP D QA R HRIGQ V IYR ++ ++EE + + A +K
Sbjct: 1270 VNLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRNVSIYRLISERTIEENILRKATQKR 1329
Query: 802 MLTHLVVRPGMGGKQANFTKQELDDI 827
L L + G F KQ D I
Sbjct: 1330 RLGELAIDEA--GFTPEFFKQS-DSI 1352
>POMBASE|SPAC1250.01 [details] [associations]
symbol:snf21 "ATP-dependent DNA helicase Snf21"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0000991 "core RNA polymerase II binding
transcription factor activity" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IC] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0016586 "RSC complex"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 PomBase:SPAC1250.01 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0006338 GO:GO:0000790
GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016586 GO:GO:0000991 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172362
KO:K11786 EMBL:AB162438 PIR:T37561 RefSeq:NP_594861.1
ProteinModelPortal:Q9UTN6 DIP:DIP-48388N STRING:Q9UTN6
EnsemblFungi:SPAC1250.01.1 GeneID:2542638 KEGG:spo:SPAC1250.01
OMA:WAPSISA OrthoDB:EOG4D565R NextBio:20803687 Uniprot:Q9UTN6
Length = 1199
Score = 282 (104.3 bits), Expect = 3.7e-59, Sum P(4) = 3.7e-59
Identities = 53/94 (56%), Positives = 70/94 (74%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F+ MT++++I+EDYL ++Y R+DG+ R + + FN P A +FLLSTR+GGL
Sbjct: 758 FFQMTQIMNIMEDYLHYRQWRYLRLDGSTKADDRSKLLGVFNDPTAEVNLFLLSTRAGGL 817
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ 737
G+NL TADTVII+DSDWNPH D+QA RAHRIGQ
Sbjct: 818 GLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQ 851
Score = 242 (90.2 bits), Expect = 3.7e-59, Sum P(4) = 3.7e-59
Identities = 61/166 (36%), Positives = 90/166 (54%)
Query: 358 RIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGY-SIQ 416
++R S F VLLT+YE I D LL I+W +++DE HR+K+ QSK L+ Y S +
Sbjct: 510 QVRHSN--FQVLLTTYEYIIKDRPLLSRIKWIYMIIDEGHRMKNTQSKLTNTLTTYYSSR 567
Query: 417 NKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQ----AEFA--------DISKEEQ- 463
+L+LTGTP P FN + SF FA ++++EE
Sbjct: 568 YRLILTGTPLQNNLPELWALLNFVLPRIFNSIKSFDEWFNTPFANTGGQDKMELTEEESL 627
Query: 464 --VKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYY 507
++RLH +L P +LRRLK DV +P K E ++R ++S +Q+K Y
Sbjct: 628 LVIRRLHKVLRPFLLRRLKKDVEAELPDKVEKVIRCQMSGLQQKLY 673
Score = 235 (87.8 bits), Expect = 3.7e-59, Sum P(4) = 3.7e-59
Identities = 48/110 (43%), Positives = 65/110 (59%)
Query: 230 DLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLY 289
++R+ +QP L G +L YQL G+ W+ + +++ ILADEMGLGKTIQTI+ +
Sbjct: 400 NIREVVTEQPSIL--VGGKLKEYQLRGLQWMISLYNNHLNGILADEMGLGKTIQTISLIT 457
Query: 290 SLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVL 339
L ++ GPFLV PLST+ NW EFE WAP + Y G R L
Sbjct: 458 HLIEKKRQNGPFLVIVPLSTLTNWTMEFERWAPSIVKIVYKGPPQVRKAL 507
Score = 213 (80.0 bits), Expect = 1.0e-51, Sum P(4) = 1.0e-51
Identities = 47/109 (43%), Positives = 66/109 (60%)
Query: 721 NPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMI 780
+P ++ F + R G +NL TADTVII+DSDWNPH D+QA RAHRIGQ +V I
Sbjct: 800 DPTAEVNLFLLSTRAGGLG--LNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEVRI 857
Query: 781 YRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQANFTKQELDDILR 829
YR +T SVEE + A+ K+ + V++ G ++ T +E + LR
Sbjct: 858 YRLITEKSVEENILARAQYKLDIDGKVIQAGKFDNKS--TPEEREAFLR 904
Score = 179 (68.1 bits), Expect = 3.9e-45, Sum P(4) = 3.9e-45
Identities = 53/188 (28%), Positives = 92/188 (48%)
Query: 457 DISKEEQ---VKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTR 513
++++EE ++RLH +L P +LRRLK DV +P K E ++R ++S +Q+K Y Y + +
Sbjct: 620 ELTEEESLLVIRRLHKVLRPFLLRRLKKDVEAELPDKVEKVIRCQMSGLQQKLY-YQMKK 678
Query: 514 N--FEALNPKGGGQQVS-LLNIMMDLKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAG 570
+ + K G + L N +M LKK CNHP++F G Y++ L R +G
Sbjct: 679 HGMLYVEDAKRGKTGIKGLQNTVMQLKKICNHPFVFEDVERSIDPTGFNYDM--LWRVSG 736
Query: 571 XXXXXXXXXXXXXEDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWED 630
GHR + + +++N + D ++ +WR L D +T D
Sbjct: 737 KFELLDRILPKLFRSGHRILM---FFQMTQIMN--IMED--YLHYRQWRYLRLDGSTKAD 789
Query: 631 ENEDIPGL 638
+ + G+
Sbjct: 790 DRSKLLGV 797
Score = 40 (19.1 bits), Expect = 3.7e-59, Sum P(4) = 3.7e-59
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 127 EKKYYRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENE 177
++KY +Y I + I NR+ + + D + Y RD+ A +D+NE
Sbjct: 143 QRKYLQYQISEDDAIKNRMF--RRMSDLES-YPAVMRDV----AELKDDNE 186
Score = 40 (19.1 bits), Expect = 7.9e-34, Sum P(4) = 7.9e-34
Identities = 15/47 (31%), Positives = 21/47 (44%)
Query: 619 RDLPYDKATWEDENEDIPGLKESIEFYNMT---KMLDILEDYLDGEG 662
R+ PY K E E + + E EFY K D+L++ G G
Sbjct: 950 RESPYGK---NKEKERLIQVSELPEFYQREEPEKTTDLLQEEPLGRG 993
>UNIPROTKB|F1NYY9 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0010571 "positive
regulation of DNA replication involved in S phase" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0030307 "positive
regulation of cell growth" evidence=IEA] [GO:0031011 "Ino80
complex" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0043014 "alpha-tubulin binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051225 "spindle
assembly" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0071479 "cellular response to ionizing radiation"
evidence=IEA] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003678 "DNA helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 GO:GO:0005524
GO:GO:0030307 GO:GO:0051225 GO:GO:0003677 GO:GO:0045944
GO:GO:0016887 GO:GO:0006338 GO:GO:0000070 GO:GO:0031011
GO:GO:0000724 GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914
GO:GO:2000045 GO:GO:0010571 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:AADN02033529 EMBL:AADN02033530 IPI:IPI00604387
Ensembl:ENSGALT00000013933 Uniprot:F1NYY9
Length = 1564
Score = 454 (164.9 bits), Expect = 3.8e-59, Sum P(2) = 3.8e-59
Identities = 113/317 (35%), Positives = 165/317 (52%)
Query: 248 QLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPL 307
+L YQL+G+NWL + Q I+ ILADEMGLGKT+Q+I L L + + GPFL+ +P
Sbjct: 522 KLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISPA 581
Query: 308 STIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFH 367
ST+ NW +EF + P F V+ Y G+ R V+R W + + FH
Sbjct: 582 STLNNWHQEFARFVPKFKVLPYWGNPHDRKVIRKF---WSQKT--------LYTQDAPFH 630
Query: 368 VLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXX 427
V++TSY+L+ DV ++W +V+DEA LKS+ S +K L + +N+LLLTGTP
Sbjct: 631 VVITSYQLVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQ 690
Query: 428 XXXXXXXXXXXXXTPEKFNDLTSFQAEFA-DISK---------EEQVKRLHDLLGPHMLR 477
P F+ F F+ DI E Q+ RLH +L P MLR
Sbjct: 691 NTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLR 750
Query: 478 RLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTR-NFEAL--NPKGGGQQV-----SL 529
R+K DV + K E ++ + + QK Y+ + + + + L + G QQ SL
Sbjct: 751 RIKKDVENELSDKIEILMYCQQTSRQKLLYQALKNKISIDDLLQSSMGTTQQAQTTTSSL 810
Query: 530 LNIMMDLKKCCNHPYLF 546
+N++M +K CNHP LF
Sbjct: 811 MNLVMQFRKVCNHPELF 827
Score = 244 (91.0 bits), Expect = 3.8e-59, Sum P(2) = 3.8e-59
Identities = 50/94 (53%), Positives = 64/94 (68%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
+ MT+M+D+LE+Y+ + Y R+DG+ S R++ + F FVFLLSTR+GGL
Sbjct: 1131 YSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDMVADFQNRN-DIFVFLLSTRAGGL 1189
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ 737
GINL ADTVI YDSDWNP D QA RAHR+GQ
Sbjct: 1190 GINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQ 1223
Score = 210 (79.0 bits), Expect = 1.5e-55, Sum P(2) = 1.5e-55
Identities = 43/94 (45%), Positives = 57/94 (60%)
Query: 718 SDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 777
+D+ NDI F + R G INL ADTVI YDSDWNP D QA RAHR+GQ +
Sbjct: 1169 ADFQNRNDIFVFLLSTRAGGLG--INLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ 1226
Query: 778 VMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPG 811
V +YR + + ++EER+ Q AK K + +V+ G
Sbjct: 1227 VTVYRLICKGTIEERILQRAKEKSEIQRMVISGG 1260
>ASPGD|ASPL0000056677 [details] [associations]
symbol:AN1024 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0006312 "mitotic
recombination" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:BN001308 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
HOGENOM:HOG000172362 EnsemblFungi:CADANIAT00001623 OMA:NNITELW
Uniprot:C8VTY9
Length = 868
Score = 459 (166.6 bits), Expect = 5.8e-59, Sum P(3) = 5.8e-59
Identities = 109/281 (38%), Positives = 150/281 (53%)
Query: 245 TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVS 304
TG ++ YQLEG+ WL+ W + ILADEMGLGKT+Q I+ L + FKE + GPFL+S
Sbjct: 198 TGGKMRKYQLEGLEWLKSLWMNGLCGILADEMGLGKTVQAIS-LIAFFKEHNVSGPFLIS 256
Query: 305 APLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTV 364
APLST+ NW EF W P V Y G +D R LR ++ D + P
Sbjct: 257 APLSTVSNWVDEFARWTPGIKTVLYHGTRDERAQLRKKFMNLRDQKS----P-------- 304
Query: 365 KFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGT 424
F V+ TSYE+ ND L +W ++VDE HRLK+ + K L Y+ N+LL+TGT
Sbjct: 305 DFPVVCTSYEICMNDRKFLAQYQWRYIIVDEGHRLKNMNCRLIKELLSYNSANRLLITGT 364
Query: 425 PXXXXXXXXXXXXXXXTPEKFNDLTSFQA--EFADI----SKEEQVKR--------LHDL 470
P PE FNDL SFQ +F+ + + + ++R +H +
Sbjct: 365 PLQNNITELWSLLHFLLPEIFNDLNSFQNWFDFSSVLDNNGQTDMIERRKRTLVSTMHSI 424
Query: 471 LGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYIL 511
L P +LRR+K DV +P K E+I+ L+ QK Y+ IL
Sbjct: 425 LKPFLLRRVKTDVESALPKKREYILYAPLTLEQKDLYREIL 465
Score = 232 (86.7 bits), Expect = 5.8e-59, Sum P(3) = 5.8e-59
Identities = 55/110 (50%), Positives = 66/110 (60%)
Query: 644 FYNMTKMLDILEDYLDG-EGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGG 702
F LDIL+D+ + RIDG I+ + RQ I FN + +FLLSTR+GG
Sbjct: 648 FSQFKTQLDILQDWATHLRSWNCCRIDGAISQADRQAQIKAFNTDKDYK-IFLLSTRAGG 706
Query: 703 LGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYI--NLATADTV 750
GINL ADTVI++DSDWNP D+QA RAHRIGQ I LAT TV
Sbjct: 707 QGINLVAADTVILFDSDWNPQQDLQAQDRAHRIGQTKPVIVYRLATKGTV 756
Score = 210 (79.0 bits), Expect = 1.2e-56, Sum P(3) = 1.2e-56
Identities = 44/113 (38%), Positives = 67/113 (59%)
Query: 720 WNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVM 779
+N D + F + R G Q INL ADTVI++DSDWNP D+QA RAHRIGQ V+
Sbjct: 689 FNTDKDYKIFLLSTRAGGQG--INLVAADTVILFDSDWNPQQDLQAQDRAHRIGQTKPVI 746
Query: 780 IYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGK---QANFTKQELDDILR 829
+YR T+ +VE+ + + A K L LV++ G ++ ++ ++D++ R
Sbjct: 747 VYRLATKGTVEQTLLEKADSKRRLERLVIQKGKFKSLLSESTMSRDDVDELKR 799
Score = 37 (18.1 bits), Expect = 5.8e-59, Sum P(3) = 5.8e-59
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 526 QVSLLNIMMDLKKCCNHPYLF 546
Q + N +M + CN P+ F
Sbjct: 586 QKKMQNPVMQARLACNSPHNF 606
>RGD|1302988 [details] [associations]
symbol:Smarca2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 2"
species:10116 "Rattus norvegicus" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0016514 "SWI/SNF complex"
evidence=ISO] [GO:0030308 "negative regulation of cell growth"
evidence=ISO] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=ISO] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045111 "intermediate filament cytoskeleton" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=ISO] [GO:0071565 "nBAF
complex" evidence=ISO] [GO:0071778 "WINAC complex" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636
OrthoDB:EOG418BMJ IPI:IPI00464435 EMBL:AY643746
RefSeq:NP_001004446.1 UniGene:Rn.94939 ProteinModelPortal:Q6DUH4
SMR:Q6DUH4 STRING:Q6DUH4 GeneID:361745 KEGG:rno:361745
UCSC:RGD:1302988 InParanoid:Q6DUH4 NextBio:677480
Genevestigator:Q6DUH4 Uniprot:Q6DUH4
Length = 1597
Score = 301 (111.0 bits), Expect = 1.1e-58, Sum P(3) = 1.1e-58
Identities = 68/155 (43%), Positives = 92/155 (59%)
Query: 598 ANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDY 657
+N VIN L S + + R LP +AT N + + F MT ++ I+EDY
Sbjct: 1043 SNGVINGAELYRASGKFELLDRILPKLRAT----NHRV------LLFCQMTSLMTIMEDY 1092
Query: 658 LDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYD 717
+ Y R+DG R + +FN PG+ F+FLLSTR+GGLG+NL ADTV+I+D
Sbjct: 1093 FAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFD 1152
Query: 718 SDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV 750
SDWNPH D+QA RAHRIGQQN + + L T ++V
Sbjct: 1153 SDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSV 1187
Score = 239 (89.2 bits), Expect = 1.1e-58, Sum P(3) = 1.1e-58
Identities = 61/182 (33%), Positives = 99/182 (54%)
Query: 344 ISWEDT-ANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSN 402
IS++ T A R ++RS KF+ LLT+YE I D +L I W ++VDE HR+K++
Sbjct: 809 ISYKGTPAMRRSLVPQLRSG--KFNALLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNH 866
Query: 403 QSKFFKFLSG-YSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQ----AEFA- 456
K + L+ Y ++LLTGTP P F ++F+ A FA
Sbjct: 867 HCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAM 926
Query: 457 -----DISKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYK 508
D+++EE + +RLH +L P +LRRLK +V +P K E++++ ++S +QK Y+
Sbjct: 927 TGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYR 986
Query: 509 YI 510
++
Sbjct: 987 HM 988
Score = 217 (81.4 bits), Expect = 1.3e-49, Sum P(3) = 1.3e-49
Identities = 40/71 (56%), Positives = 52/71 (73%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL ADTV+I+DSDWNPH D+QA RAHRIGQQN+V + R T NSVEE++ AK K+
Sbjct: 1140 LNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKL 1199
Query: 802 MLTHLVVRPGM 812
+ V++ GM
Sbjct: 1200 NVDQKVIQAGM 1210
Score = 212 (79.7 bits), Expect = 1.1e-58, Sum P(3) = 1.1e-58
Identities = 43/101 (42%), Positives = 61/101 (60%)
Query: 231 LRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYS 290
+ ++ EKQ L + G H YQL+G+ W+ + N++ ILADEMG GKTIQTI +
Sbjct: 715 ISERVEKQSALLIN-GTLKH-YQLQGLEWMVSLYNNNLNGILADEMGPGKTIQTIALITY 772
Query: 291 LFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVG 331
L + GP+L+ PLST+ NW EF+ WAP ++Y G
Sbjct: 773 LMEHKGLNGPYLIIVPLSTLSNWTYEFDKWAPSAVKISYKG 813
Score = 193 (73.0 bits), Expect = 6.9e-54, Sum P(3) = 6.9e-54
Identities = 47/138 (34%), Positives = 75/138 (54%)
Query: 445 FNDLTSFQAEFADISKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSP 501
FN + E D+++EE + +RLH +L P +LRRLK +V +P K E++++ ++S
Sbjct: 920 FNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSA 979
Query: 502 MQKKYYKY-----ILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFP----AAAEE 552
+QK Y++ IL + + KG G +L+N +M L+K CNHPY+F + AE
Sbjct: 980 LQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEH 1039
Query: 553 APVQGGQYEIQALTRAAG 570
G L RA+G
Sbjct: 1040 LGYSNGVINGAELYRASG 1057
>UNIPROTKB|F1MFS2 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9913 "Bos taurus" [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0006974
GO:GO:0006338 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR002589 PROSITE:PS51154 GO:GO:0008026 IPI:IPI00710168
OMA:TCQTIAL GeneTree:ENSGT00670000098110 EMBL:DAAA02007335
Ensembl:ENSBTAT00000027762 Uniprot:F1MFS2
Length = 896
Score = 393 (143.4 bits), Expect = 2.9e-58, Sum P(2) = 2.9e-58
Identities = 110/322 (34%), Positives = 158/322 (49%)
Query: 245 TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVS 304
TG+ L YQL+G+NWL + IL DEMGLGKT QTI L + +GPFL+
Sbjct: 44 TGIHLRPYQLQGVNWLAQCFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLIL 103
Query: 305 APLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTV 364
PLS + NW+ E E +AP VTY GDKD R L+ D+ E + I
Sbjct: 104 CPLSVLSNWKEEMERFAPGLSCVTYAGDKDKRACLQQ-DLKQESRFHVLLTTYEICLKDA 162
Query: 365 KFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFL-SGYSIQNKLLLTG 423
F L+ ++ L + + ++L H+ S S F L +G IQN L
Sbjct: 163 SFLKSFPWSVLVVDEAHRLKN-QSSLL-----HKTLSEFSVVFSLLLTGTPIQNSL---- 212
Query: 424 TPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKE-EQVKRLHDLLGPHMLRRLKAD 482
+ E+ D F + DI KE E L+ LL P +LRR+KA+
Sbjct: 213 --QELYSLLSFVEPDLFSKEQVED---FVQRYQDIEKESESASELYKLLQPFLLRRVKAE 267
Query: 483 VLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNH 542
V +P K+E ++ +S +QKKYYK IL ++ +A + ++V L N++ L+KC +H
Sbjct: 268 VATELPRKTEVVIYHGMSALQKKYYKAILMKDLDAFENEMA-KKVKLQNVLSQLRKCVDH 326
Query: 543 PYLFPAAAEEAPVQGGQYEIQA 564
PYLF E P + G + I+A
Sbjct: 327 PYLFDGVEPE-PFEIGDHLIEA 347
Score = 291 (107.5 bits), Expect = 2.9e-58, Sum P(2) = 2.9e-58
Identities = 62/114 (54%), Positives = 76/114 (66%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MT+MLDIL+DYLD GY YER+DG++ G R +I F G LSTR+GG+
Sbjct: 371 FSQMTQMLDILQDYLDYRGYSYERVDGSVRGEERHLAIKNF---GQQPIFTFLSTRAGGV 427
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV--IIY 753
G+NL ADTVI +DSD+NP ND+QA +RAHRIGQ K I L DTV I+Y
Sbjct: 428 GMNLTAADTVIFFDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVY 481
Score = 202 (76.2 bits), Expect = 6.6e-49, Sum P(2) = 6.6e-49
Identities = 47/125 (37%), Positives = 68/125 (54%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL ADTVI +DSD+NP ND+QA +RAHRIGQ V + R + R++VEE V + A K+
Sbjct: 429 MNLTAADTVIFFDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKL 488
Query: 802 MLTHLVVRPG---MGG-KQANFTKQELDDILRFGTXXXXXXXXXXXXXXXIIKQEAENQD 857
LT+ ++ G +G K A +L +IL+FG + E +D
Sbjct: 489 QLTNTIIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLSSEGSTMHEIDLKSILGETED 548
Query: 858 PAYWV 862
+WV
Sbjct: 549 -GHWV 552
>DICTYBASE|DDB_G0292948 [details] [associations]
symbol:isw "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0016587 "Isw1
complex" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 dictyBase:DDB_G0292948 GO:GO:0005524
GenomeReviews:CM000155_GR GO:GO:0003677 EMBL:AAFI02000197
GO:GO:0016887 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016587 KO:K11654 SUPFAM:SSF101224
RefSeq:XP_629432.1 ProteinModelPortal:Q54CI4 STRING:Q54CI4
PRIDE:Q54CI4 EnsemblProtists:DDB0231763 GeneID:8628951
KEGG:ddi:DDB_G0292948 InParanoid:Q54CI4 OMA:IREANAF
ProtClustDB:CLSZ2728711 Uniprot:Q54CI4
Length = 1221
Score = 390 (142.3 bits), Expect = 7.1e-58, Sum P(3) = 7.1e-58
Identities = 112/333 (33%), Positives = 176/333 (52%)
Query: 235 YEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKE 294
+ PP++ M+ YQ+ G+NWL + + I+ ILADEMGLGKT+QTI+ L L +
Sbjct: 264 FTSSPPYIKSGTMR--DYQVYGLNWLIQLYERGINGILADEMGLGKTLQTISLLGYLSEY 321
Query: 295 GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWE--DTANR 352
+GP L+ AP ST+ W +EF W P VV + G K+ R ++ + + ++ D
Sbjct: 322 KGIRGPHLIIAPKSTLSGWAKEFTRWCPFLRVVRFHGSKEEREDIKKNQLIFKKFDVCIT 381
Query: 353 GGKPC-RIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLS 411
+ R +S+ KF S+ I D A E +VL + ++ S+F ++
Sbjct: 382 TYEVAIREKSTFKKF-----SWRYIIIDEAHRIKNENSVL----SKGVRMFNSQFRLLIT 432
Query: 412 GYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQVKRLHDLL 471
G +QN L + +K+ DL + E +++E + +LH +L
Sbjct: 433 GTPLQNNLHELWSLLNFLLPDVFSSSDDF--DKWFDLAN-NTE----NQQEVIDKLHKVL 485
Query: 472 GPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEAL--NPKGGGQQVSL 529
P +LRR+K +V K++P K E + V LS MQK++YK +L+++ +A+ KG +V L
Sbjct: 486 RPFLLRRIKTEVEKSLPPKKEIKLFVGLSTMQKEWYKRLLSKDLDAVVVGAKGNTGRVRL 545
Query: 530 LNIMMDLKKCCNHPYLFPAAAEEAPVQGGQYEI 562
LNI M L+K CNHPYLF A EE P G++ I
Sbjct: 546 LNICMQLRKACNHPYLFDGAEEE-PYTTGEHLI 577
Score = 304 (112.1 bits), Expect = 7.1e-58, Sum P(3) = 7.1e-58
Identities = 57/94 (60%), Positives = 71/94 (75%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F M++MLDILEDY+ GYKY RIDG+ +R+ SI+ +N PG+ F FLL+TR+GGL
Sbjct: 603 FSQMSRMLDILEDYMLYRGYKYARIDGSTESIVRENSIENYNKPGSDLFAFLLTTRAGGL 662
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ 737
GI L TAD VI++DSDWNP D+QA RAHRIGQ
Sbjct: 663 GITLNTADIVILFDSDWNPQMDLQAQDRAHRIGQ 696
Score = 231 (86.4 bits), Expect = 3.0e-50, Sum P(3) = 3.0e-50
Identities = 52/111 (46%), Positives = 69/111 (62%)
Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
P +D+ AF R G I L TAD VI++DSDWNP D+QA RAHRIGQ V +Y
Sbjct: 646 PGSDLFAFLLTTRAGGLG--ITLNTADIVILFDSDWNPQMDLQAQDRAHRIGQTKPVTVY 703
Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRPG-MGGKQANFTKQELDDILRFG 831
RFVT NS+EE++ + A+ K+ L LV++ G + N +EL +LRFG
Sbjct: 704 RFVTENSMEEKMVEKAEMKLQLDALVIQQGRLVEANKNAKPEELLAMLRFG 754
Score = 40 (19.1 bits), Expect = 7.1e-58, Sum P(3) = 7.1e-58
Identities = 8/27 (29%), Positives = 17/27 (62%)
Query: 863 KLLRHHYEQHQEDVSRTLGKGKRVRKQ 889
+LL++ ++HQE+V KR +++
Sbjct: 1088 QLLKYIIKEHQEEVEAAKEAEKRKKEK 1114
>ZFIN|ZDB-GENE-030605-1 [details] [associations]
symbol:smarca4 "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily a, member 4"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0031101 "fin regeneration" evidence=IMP] [GO:0003407 "neural
retina development" evidence=IMP] [GO:0007417 "central nervous
system development" evidence=IMP] [GO:0014032 "neural crest cell
development" evidence=IMP] [GO:0060059 "embryonic retina
morphogenesis in camera-type eye" evidence=IMP] [GO:0010842 "retina
layer formation" evidence=IMP] [GO:0021634 "optic nerve formation"
evidence=IMP] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0060973 "cell migration involved in heart development"
evidence=IMP] [GO:0001947 "heart looping" evidence=IMP] [GO:0060038
"cardiac muscle cell proliferation" evidence=IMP] [GO:0048596
"embryonic camera-type eye morphogenesis" evidence=IMP] [GO:0000185
"activation of MAPKKK activity" evidence=IMP] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 ZFIN:ZDB-GENE-030605-1 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0030182 GO:GO:0003677 GO:GO:0007417
GO:GO:0004386 GO:GO:0001947 GO:GO:0010842 GO:GO:0014032
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0031101 GO:GO:0060038 GO:GO:0048596
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 GO:GO:0060059 GO:GO:0000185 HOGENOM:HOG000172363
HOVERGEN:HBG056636 CTD:6597 OMA:HKPMESM EMBL:BX322663 EMBL:BC163918
EMBL:BC163920 EMBL:AY205256 EMBL:AY218841 IPI:IPI00493397
RefSeq:NP_853634.1 UniGene:Dr.2414 SMR:Q7ZSY3 STRING:Q7ZSY3
Ensembl:ENSDART00000115110 Ensembl:ENSDART00000134514 GeneID:353295
KEGG:dre:353295 InParanoid:Q7ZSY3 NextBio:20812727 GO:GO:0060973
GO:GO:0021634 Uniprot:Q7ZSY3
Length = 1627
Score = 296 (109.3 bits), Expect = 8.5e-58, Sum P(4) = 8.5e-58
Identities = 65/147 (44%), Positives = 89/147 (60%)
Query: 610 GSTIYLVKWRDLPYDKATWEDENEDIPGLKES----IEFYNMTKMLDILEDYLDGEGYKY 665
G T +V+ DL +E + +P L+ + + F MT ++ I+EDY +KY
Sbjct: 1076 GFTGGIVQGSDLYRASGKFELLDRILPKLRATNHKVLLFCQMTTLMTIMEDYFAYRNFKY 1135
Query: 666 ERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWNPHND 725
R+DG R + FN P F+FLLSTR+GGLG+NL +ADTVII+DSDWNPH D
Sbjct: 1136 LRLDGTTKAEDRGMLLKNFNDPSHQYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQD 1195
Query: 726 IQAFSRAHRIGQQN--KYINLATADTV 750
+QA RAHRIGQQN + + L T ++V
Sbjct: 1196 LQAQDRAHRIGQQNEVRVLRLCTVNSV 1222
Score = 230 (86.0 bits), Expect = 8.5e-58, Sum P(4) = 8.5e-58
Identities = 57/175 (32%), Positives = 95/175 (54%)
Query: 350 ANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKF 409
A R P +RS KF+VL+T+YE I D +L + W ++VDE HR+K++ K +
Sbjct: 852 ARRAFLPI-LRSG--KFNVLVTTYEYIIKDKQVLAKLRWKYMIVDEGHRMKNHHCKLTQV 908
Query: 410 LSG-YSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQ----AEFA------DI 458
L+ Y ++LLTGTP P F ++F+ A FA D+
Sbjct: 909 LNTHYLAPRRVLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDL 968
Query: 459 SKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYI 510
++EE + +RLH +L P +LRRLK +V +P K E++++ ++S +Q+ Y+++
Sbjct: 969 NEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHM 1023
Score = 229 (85.7 bits), Expect = 8.5e-58, Sum P(4) = 8.5e-58
Identities = 49/104 (47%), Positives = 63/104 (60%)
Query: 233 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 292
+K EKQ L + G QL YQ++G+ WL + N++ ILADEMGLGKTIQTI + L
Sbjct: 752 EKVEKQSSLLVN-G-QLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLM 809
Query: 293 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR 336
+ GPFL+ PLST+ NW EF+ WAP V+Y G R
Sbjct: 810 EFKRLNGPFLIIVPLSTLSNWVYEFDKWAPSVVKVSYKGSPAAR 853
Score = 219 (82.2 bits), Expect = 2.1e-49, Sum P(4) = 2.1e-49
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL +ADTVII+DSDWNPH D+QA RAHRIGQQN+V + R T NSVEE++ AK K+
Sbjct: 1175 LNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKL 1234
Query: 802 MLTHLVVRPGM 812
+ V++ GM
Sbjct: 1235 NVDQKVIQAGM 1245
Score = 192 (72.6 bits), Expect = 7.5e-54, Sum P(4) = 7.5e-54
Identities = 47/139 (33%), Positives = 78/139 (56%)
Query: 445 FNDLTSFQAEFADISKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSP 501
FN + E D+++EE + +RLH +L P +LRRLK +V +P K E++++ ++S
Sbjct: 955 FNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSA 1014
Query: 502 MQKKYYKY------ILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFP----AAAE 551
+Q+ Y++ +LT E + KG G +L+N +M L+K CNHPY+F + +E
Sbjct: 1015 LQRVLYRHMQAKGVLLTDGSEK-DKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSE 1073
Query: 552 EAPVQGGQYEIQALTRAAG 570
GG + L RA+G
Sbjct: 1074 HLGFTGGIVQGSDLYRASG 1092
Score = 37 (18.1 bits), Expect = 8.5e-58, Sum P(4) = 8.5e-58
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 873 QEDVSRTLGKGKRVRKQ 889
+E+ + G+G R RK+
Sbjct: 1339 EEEEEKMFGRGSRQRKE 1355
>UNIPROTKB|F1MJ46 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9913
"Bos taurus" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564
"npBAF complex" evidence=IEA] [GO:0060347 "heart trabecula
formation" evidence=IEA] [GO:0060318 "definitive erythrocyte
differentiation" evidence=IEA] [GO:0048730 "epidermis
morphogenesis" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0001835
GO:GO:0007403 GO:GO:0006346 GO:GO:0010424 GO:GO:0060318
GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 GO:GO:0035887
IPI:IPI00693529 OMA:HKPMESM EMBL:DAAA02019479 EMBL:DAAA02019480
EMBL:DAAA02019481 Ensembl:ENSBTAT00000025598 ArrayExpress:F1MJ46
Uniprot:F1MJ46
Length = 1604
Score = 288 (106.4 bits), Expect = 8.9e-58, Sum P(4) = 8.9e-58
Identities = 66/147 (44%), Positives = 91/147 (61%)
Query: 610 GSTIYLVKWRDLPYDKATWEDENEDIPGLKES----IEFYNMTKMLDILEDYLDGEGYKY 665
G T +V+ DL +E + +P L+ + + F MT ++ I+EDY G+KY
Sbjct: 1056 GFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKY 1115
Query: 666 ERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWNPHND 725
R+DG R + FN PG+ F+ LLSTR+GGLG+NL +ADTVII+DSDWNPH D
Sbjct: 1116 LRLDGTTKAEDRGMLLT-FNEPGSEYFI-LLSTRAGGLGLNLQSADTVIIFDSDWNPHQD 1173
Query: 726 IQAFSRAHRIGQQN--KYINLATADTV 750
+QA RAHRIGQQN + + L T ++V
Sbjct: 1174 LQAQDRAHRIGQQNEVRVLRLCTVNSV 1200
Score = 240 (89.5 bits), Expect = 8.9e-58, Sum P(4) = 8.9e-58
Identities = 60/175 (34%), Positives = 96/175 (54%)
Query: 350 ANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKF 409
A R P ++RS KF+VLLT+YE I D +L I W ++VDE HR+K++ K +
Sbjct: 832 ARRAFVP-QLRSG--KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQV 888
Query: 410 LSG-YSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQ----AEFA------DI 458
L+ Y +LLLTGTP P F ++F+ A FA D+
Sbjct: 889 LNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDL 948
Query: 459 SKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYI 510
++EE + +RLH +L P +LRRLK +V +P K E++++ ++S +Q+ Y+++
Sbjct: 949 NEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHM 1003
Score = 221 (82.9 bits), Expect = 8.9e-58, Sum P(4) = 8.9e-58
Identities = 45/104 (43%), Positives = 63/104 (60%)
Query: 233 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 292
++ +KQ + + G+ L YQ++G+ WL + N++ ILADEMGLGKTIQTI + L
Sbjct: 732 ERVDKQSALMVN-GV-LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLM 789
Query: 293 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR 336
+ GPFL+ PLST+ NW EF+ WAP V+Y G R
Sbjct: 790 EHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR 833
Score = 219 (82.2 bits), Expect = 2.6e-50, Sum P(4) = 2.6e-50
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL +ADTVII+DSDWNPH D+QA RAHRIGQQN+V + R T NSVEE++ AK K+
Sbjct: 1153 LNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKL 1212
Query: 802 MLTHLVVRPGM 812
+ V++ GM
Sbjct: 1213 NVDQKVIQAGM 1223
Score = 190 (71.9 bits), Expect = 1.4e-52, Sum P(4) = 1.4e-52
Identities = 47/139 (33%), Positives = 78/139 (56%)
Query: 445 FNDLTSFQAEFADISKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSP 501
FN + E D+++EE + +RLH +L P +LRRLK +V +P K E++++ ++S
Sbjct: 935 FNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSA 994
Query: 502 MQKKYYKY------ILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFP----AAAE 551
+Q+ Y++ +LT E + KG G +L+N +M L+K CNHPY+F + +E
Sbjct: 995 LQRVLYRHMQAKGVLLTDGSEK-DKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSE 1053
Query: 552 EAPVQGGQYEIQALTRAAG 570
GG + L RA+G
Sbjct: 1054 HLGFTGGIVQGLDLYRASG 1072
Score = 43 (20.2 bits), Expect = 8.9e-58, Sum P(4) = 8.9e-58
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 908 TGRRSAKKKEMSKQERDRPLPP 929
T RS K + SK+++ R PP
Sbjct: 1383 TSTRSRDKDDESKKQKKRGRPP 1404
>ZFIN|ZDB-GENE-030131-5964 [details] [associations]
symbol:smarca2 "SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, subfamily a,
member 2" species:7955 "Danio rerio" [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 ZFIN:ZDB-GENE-030131-5964 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 KO:K11647
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 CTD:6595
HOVERGEN:HBG056636 EMBL:BC060676 IPI:IPI00483012 RefSeq:NP_997881.1
UniGene:Dr.93531 ProteinModelPortal:Q6P9P2 SMR:Q6P9P2 STRING:Q6P9P2
GeneID:334032 KEGG:dre:334032 InParanoid:Q6P9P2 NextBio:20810237
ArrayExpress:Q6P9P2 Uniprot:Q6P9P2
Length = 1568
Score = 294 (108.6 bits), Expect = 9.4e-58, Sum P(3) = 9.4e-58
Identities = 56/109 (51%), Positives = 73/109 (66%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MT ++ ILEDY + Y R+DG R + +FN G+ F+FLLSTR+GGL
Sbjct: 1074 FCQMTSLMTILEDYFGYRNFLYLRLDGTTKSEDRAMLLKKFNEEGSQYFIFLLSTRAGGL 1133
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV 750
G+NL ADTV+I+DSDWNPH D+QA RAHRIGQQN + + L T ++V
Sbjct: 1134 GLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSV 1182
Score = 239 (89.2 bits), Expect = 9.4e-58, Sum P(3) = 9.4e-58
Identities = 57/167 (34%), Positives = 93/167 (55%)
Query: 358 RIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSG-YSIQ 416
++RS KF+VL+T+YE I D +L I W ++VDE HR+K++ K + L+ Y
Sbjct: 819 QLRSG--KFNVLITTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAP 876
Query: 417 NKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQ----AEFA------DISKEEQV-- 464
+LLLTGTP P F ++F+ A FA D+++EE +
Sbjct: 877 RRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILI 936
Query: 465 -KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYI 510
+RLH +L P +LRRLK +V +P K E++++ ++S +QK Y+++
Sbjct: 937 IRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSAIQKVLYRHM 983
Score = 217 (81.4 bits), Expect = 1.9e-49, Sum P(3) = 1.9e-49
Identities = 40/71 (56%), Positives = 52/71 (73%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL ADTV+I+DSDWNPH D+QA RAHRIGQQN+V + R T NSVEE++ AK K+
Sbjct: 1135 LNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKL 1194
Query: 802 MLTHLVVRPGM 812
+ V++ GM
Sbjct: 1195 NVDQKVIQAGM 1205
Score = 210 (79.0 bits), Expect = 9.4e-58, Sum P(3) = 9.4e-58
Identities = 43/104 (41%), Positives = 61/104 (58%)
Query: 233 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 292
++ +KQ FL + G L YQ++G+ W+ + N++ ILADEMGLGKTIQTI + L
Sbjct: 712 ERVDKQSTFLIN-GT-LKQYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIGLITYLM 769
Query: 293 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR 336
+ GP+L+ PLST+ NW E + WAP + Y G R
Sbjct: 770 ELKRLNGPYLIIVPLSTLSNWVYELDKWAPSIVKIAYKGTPSMR 813
Score = 193 (73.0 bits), Expect = 6.1e-53, Sum P(3) = 6.1e-53
Identities = 41/110 (37%), Positives = 66/110 (60%)
Query: 445 FNDLTSFQAEFADISKEEQV---KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSP 501
FN + E D+++EE + +RLH +L P +LRRLK +V +P K E++++ ++S
Sbjct: 915 FNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSA 974
Query: 502 MQKKYYKY-----ILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLF 546
+QK Y++ IL + + KG G +L+N +M LKK CNHPY+F
Sbjct: 975 IQKVLYRHMQGKGILLTDGSEKDKKGKGGAKTLMNTIMQLKKICNHPYMF 1024
>CGD|CAL0000801 [details] [associations]
symbol:orf19.1720 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0006312 "mitotic
recombination" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
CGD:CAL0000801 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
EMBL:AACQ01000014 EMBL:AACQ01000013 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 RefSeq:XP_721671.1
RefSeq:XP_721791.1 ProteinModelPortal:Q5AJ72 GeneID:3636620
GeneID:3636670 KEGG:cal:CaO19.1720 KEGG:cal:CaO19.9288
Uniprot:Q5AJ72
Length = 864
Score = 239 (89.2 bits), Expect = 3.0e-56, Sum P(4) = 3.0e-56
Identities = 58/137 (42%), Positives = 80/137 (58%)
Query: 624 DKATWEDENEDIPGLKES----IEFYNMTKMLDILEDYLDGEGYKYE---RIDGNITGSM 676
+ A ++ N+ +P L S + F TK+LD+LED+L+ + R+DG+ +
Sbjct: 609 NSAKFQVLNQLLPPLLSSGHKVLIFAQFTKVLDLLEDWLEESPLSHGKICRLDGSTNHQI 668
Query: 677 RQESIDRFNAPGASQF-VFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRI 735
R E I +FN +F VFL STR+GGLGINL ADTVI+ D+DWNP D+QA R HRI
Sbjct: 669 RDEQISQFN--NNPKFKVFLSSTRAGGLGINLVAADTVILMDNDWNPQMDLQAIDRVHRI 726
Query: 736 GQQN--KYINLATADTV 750
GQ N K D++
Sbjct: 727 GQINPVKIFRFVIKDSI 743
Score = 224 (83.9 bits), Expect = 3.0e-56, Sum P(4) = 3.0e-56
Identities = 53/128 (41%), Positives = 71/128 (55%)
Query: 225 EKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQT 284
EK + KQP + TG QL YQ++G+ WL + ++ ILADEMGLGKT+Q
Sbjct: 153 EKSQNSSKITNNKQPKLI--TGGQLKDYQMDGLEWLITLFQNGLNGILADEMGLGKTLQC 210
Query: 285 ITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 344
I+FL L + G GPFLV P+ST+ NW E +AP V Y+G K R D D+
Sbjct: 211 ISFLSHLIENG-INGPFLVVVPVSTLSNWYNEIRKFAPKIKVTKYIGTKQER---NDIDL 266
Query: 345 -SWEDTAN 351
++T N
Sbjct: 267 LQQQETTN 274
Score = 198 (74.8 bits), Expect = 7.3e-52, Sum P(4) = 7.3e-52
Identities = 45/105 (42%), Positives = 62/105 (59%)
Query: 718 SDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 777
S +N + + F + R G INL ADTVI+ D+DWNP D+QA R HRIGQ N
Sbjct: 674 SQFNNNPKFKVFLSSTRAGGLG--INLVAADTVILMDNDWNPQMDLQAIDRVHRIGQINP 731
Query: 778 VMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQANFTKQ 822
V I+RFV ++S+EE + + K L LV++ G K +NF K+
Sbjct: 732 VKIFRFVIKDSIEEVLISRSGSKRFLERLVIQMGQF-KFSNFNKK 775
Score = 163 (62.4 bits), Expect = 3.0e-56, Sum P(4) = 3.0e-56
Identities = 35/89 (39%), Positives = 47/89 (52%)
Query: 367 HVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPX 426
+++LTSYE+ D L I W L+VDE HRLK++Q K L ++ N+LLLTGTP
Sbjct: 274 NIILTSYEISIRDFNKLVKINWKYLIVDEGHRLKNSQCLLIKILKKLNVSNRLLLTGTPL 333
Query: 427 XXXXXXXXXXXXXXTPEKFNDLTSFQAEF 455
P+ F+DL FQ F
Sbjct: 334 QNNLNELWSLLNFILPDIFHDLELFQQWF 362
Score = 140 (54.3 bits), Expect = 3.0e-56, Sum P(4) = 3.0e-56
Identities = 26/60 (43%), Positives = 42/60 (70%)
Query: 460 KEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKK-YYKYILTRNFEAL 518
+E +K LH +L P MLRRLK DV+KN+P K E+++ + ++ +QKK YY + + F++L
Sbjct: 394 QETLIKNLHTILKPFMLRRLKRDVIKNLPPKKEYLLHIPMTKLQKKIYYDAVNDKLFDSL 453
Score = 58 (25.5 bits), Expect = 2.3e-43, Sum P(4) = 2.3e-43
Identities = 24/134 (17%), Positives = 55/134 (41%)
Query: 488 PSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNI-MMDLKKCCNHPYLF 546
PS E +V++ + K ++ ++ + + + + L N+ M+ L+ CN P+++
Sbjct: 538 PSYDEALVKIRHIKSKTKIQSILIDAIYQDILKEA--KHLKLQNLKMIQLRNICNSPFIY 595
Query: 547 P--AAAEEAPVQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHRYGIKPEWLIANRVINS 604
++A V + Q L + + + +WL + + +
Sbjct: 596 YNYPILDQAEVIRNSAKFQVLNQLLPPLLSSGHKVLIFAQFTKVLDLLEDWLEESPLSHG 655
Query: 605 KTLR-DGSTIYLVK 617
K R DGST + ++
Sbjct: 656 KICRLDGSTNHQIR 669
Score = 41 (19.5 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 7/20 (35%), Positives = 15/20 (75%)
Query: 452 QAEFADISKEEQVKRLHDLL 471
Q +F +SK++++ RL+ L+
Sbjct: 45 QQQFNQLSKDKKMNRLNKLI 64
>UNIPROTKB|Q5AJ72 [details] [associations]
symbol:CaO19.1720 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 CGD:CAL0000801 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 EMBL:AACQ01000014 EMBL:AACQ01000013 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 RefSeq:XP_721671.1
RefSeq:XP_721791.1 ProteinModelPortal:Q5AJ72 GeneID:3636620
GeneID:3636670 KEGG:cal:CaO19.1720 KEGG:cal:CaO19.9288
Uniprot:Q5AJ72
Length = 864
Score = 239 (89.2 bits), Expect = 3.0e-56, Sum P(4) = 3.0e-56
Identities = 58/137 (42%), Positives = 80/137 (58%)
Query: 624 DKATWEDENEDIPGLKES----IEFYNMTKMLDILEDYLDGEGYKYE---RIDGNITGSM 676
+ A ++ N+ +P L S + F TK+LD+LED+L+ + R+DG+ +
Sbjct: 609 NSAKFQVLNQLLPPLLSSGHKVLIFAQFTKVLDLLEDWLEESPLSHGKICRLDGSTNHQI 668
Query: 677 RQESIDRFNAPGASQF-VFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRI 735
R E I +FN +F VFL STR+GGLGINL ADTVI+ D+DWNP D+QA R HRI
Sbjct: 669 RDEQISQFN--NNPKFKVFLSSTRAGGLGINLVAADTVILMDNDWNPQMDLQAIDRVHRI 726
Query: 736 GQQN--KYINLATADTV 750
GQ N K D++
Sbjct: 727 GQINPVKIFRFVIKDSI 743
Score = 224 (83.9 bits), Expect = 3.0e-56, Sum P(4) = 3.0e-56
Identities = 53/128 (41%), Positives = 71/128 (55%)
Query: 225 EKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQT 284
EK + KQP + TG QL YQ++G+ WL + ++ ILADEMGLGKT+Q
Sbjct: 153 EKSQNSSKITNNKQPKLI--TGGQLKDYQMDGLEWLITLFQNGLNGILADEMGLGKTLQC 210
Query: 285 ITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 344
I+FL L + G GPFLV P+ST+ NW E +AP V Y+G K R D D+
Sbjct: 211 ISFLSHLIENG-INGPFLVVVPVSTLSNWYNEIRKFAPKIKVTKYIGTKQER---NDIDL 266
Query: 345 -SWEDTAN 351
++T N
Sbjct: 267 LQQQETTN 274
Score = 198 (74.8 bits), Expect = 7.3e-52, Sum P(4) = 7.3e-52
Identities = 45/105 (42%), Positives = 62/105 (59%)
Query: 718 SDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 777
S +N + + F + R G INL ADTVI+ D+DWNP D+QA R HRIGQ N
Sbjct: 674 SQFNNNPKFKVFLSSTRAGGLG--INLVAADTVILMDNDWNPQMDLQAIDRVHRIGQINP 731
Query: 778 VMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQANFTKQ 822
V I+RFV ++S+EE + + K L LV++ G K +NF K+
Sbjct: 732 VKIFRFVIKDSIEEVLISRSGSKRFLERLVIQMGQF-KFSNFNKK 775
Score = 163 (62.4 bits), Expect = 3.0e-56, Sum P(4) = 3.0e-56
Identities = 35/89 (39%), Positives = 47/89 (52%)
Query: 367 HVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPX 426
+++LTSYE+ D L I W L+VDE HRLK++Q K L ++ N+LLLTGTP
Sbjct: 274 NIILTSYEISIRDFNKLVKINWKYLIVDEGHRLKNSQCLLIKILKKLNVSNRLLLTGTPL 333
Query: 427 XXXXXXXXXXXXXXTPEKFNDLTSFQAEF 455
P+ F+DL FQ F
Sbjct: 334 QNNLNELWSLLNFILPDIFHDLELFQQWF 362
Score = 140 (54.3 bits), Expect = 3.0e-56, Sum P(4) = 3.0e-56
Identities = 26/60 (43%), Positives = 42/60 (70%)
Query: 460 KEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKK-YYKYILTRNFEAL 518
+E +K LH +L P MLRRLK DV+KN+P K E+++ + ++ +QKK YY + + F++L
Sbjct: 394 QETLIKNLHTILKPFMLRRLKRDVIKNLPPKKEYLLHIPMTKLQKKIYYDAVNDKLFDSL 453
Score = 58 (25.5 bits), Expect = 2.3e-43, Sum P(4) = 2.3e-43
Identities = 24/134 (17%), Positives = 55/134 (41%)
Query: 488 PSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNI-MMDLKKCCNHPYLF 546
PS E +V++ + K ++ ++ + + + + L N+ M+ L+ CN P+++
Sbjct: 538 PSYDEALVKIRHIKSKTKIQSILIDAIYQDILKEA--KHLKLQNLKMIQLRNICNSPFIY 595
Query: 547 P--AAAEEAPVQGGQYEIQALTRAAGXXXXXXXXXXXXXEDGHRYGIKPEWLIANRVINS 604
++A V + Q L + + + +WL + + +
Sbjct: 596 YNYPILDQAEVIRNSAKFQVLNQLLPPLLSSGHKVLIFAQFTKVLDLLEDWLEESPLSHG 655
Query: 605 KTLR-DGSTIYLVK 617
K R DGST + ++
Sbjct: 656 KICRLDGSTNHQIR 669
Score = 41 (19.5 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 7/20 (35%), Positives = 15/20 (75%)
Query: 452 QAEFADISKEEQVKRLHDLL 471
Q +F +SK++++ RL+ L+
Sbjct: 45 QQQFNQLSKDKKMNRLNKLI 64
>TAIR|locus:2062840 [details] [associations]
symbol:SYD "SPLAYED" species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009908 "flower development"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=IPI] [GO:0010199 "organ
boundary specification between lateral organs and the meristem"
evidence=IGI] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=NAS] [GO:0040029 "regulation of gene expression,
epigenetic" evidence=RCA;IMP] [GO:0009611 "response to wounding"
evidence=IEP] [GO:0005829 "cytosol" evidence=IDA] [GO:0000226
"microtubule cytoskeleton organization" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006306
"DNA methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0050826 "response to
freezing" evidence=RCA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00951 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GO:GO:0009611 GO:GO:0006355
GO:GO:0003677 GO:GO:0003682 GO:GO:0016887 GO:GO:0004386
GO:GO:0009908 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 GO:GO:0010199 GO:GO:0040029 InterPro:IPR014012
PROSITE:PS51204 IPI:IPI00516285 RefSeq:NP_850116.1 UniGene:At.22414
PRIDE:F4IHS2 EnsemblPlants:AT2G28290.1 GeneID:817375
KEGG:ath:AT2G28290 OMA:SDLYAIS Uniprot:F4IHS2
Length = 3574
Score = 386 (140.9 bits), Expect = 3.7e-56, Sum P(3) = 3.7e-56
Identities = 116/368 (31%), Positives = 173/368 (47%)
Query: 205 LQEDEDGASGSKPRRYTPPPEK---PTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLR 261
L E+ED + +K Y EK +++ +QP L G +L YQ+ G+ WL
Sbjct: 711 LIENEDESDQAK--HYLESNEKYYLMAHSIKENINEQPSSL--VGGKLREYQMNGLRWLV 766
Query: 262 YSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWA 321
+ +++ ILADEMGLGKT+Q I+ + L + + +GPFLV P S + W+ E WA
Sbjct: 767 SLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRGPFLVVVPSSVLPGWQSEINFWA 826
Query: 322 PDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVA 381
P + + Y G D R L I + + +T ++ L+ + D
Sbjct: 827 PSIHKIVYCGTPDERRKLFKEQIVHQKF--------NVLLTTYEY--LMNKH-----DRP 871
Query: 382 LLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXT 441
L I W +++DE HR+K+ K L Y ++LLLTGTP
Sbjct: 872 KLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLTGTPLQNNLEELWALLNFLL 931
Query: 442 PEKFN---DLTS-----FQ------AEFADISKEEQ---VKRLHDLLGPHMLRRLKADVL 484
P FN D + FQ AE A +S+EE + RLH +L P +LRRLK V
Sbjct: 932 PNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEEENLLIINRLHQVLRPFVLRRLKHKVE 991
Query: 485 KNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPY 544
+P K E ++R E S Y K ++ R + L G + ++ N +M+L+ CNHPY
Sbjct: 992 NELPEKIERLIRCEASA----YQKLLMKRVEDNLGSIGNAKSRAVHNSVMELRNICNHPY 1047
Query: 545 LFPAAAEE 552
L +EE
Sbjct: 1048 LSQLHSEE 1055
Score = 308 (113.5 bits), Expect = 3.7e-56, Sum P(3) = 3.7e-56
Identities = 65/150 (43%), Positives = 96/150 (64%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MT++LD++EDYL +GYKY R+DG +G R ID FN G+ F+FLLS R+GG+
Sbjct: 1095 FSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSIRAGGV 1154
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDI 763
G+NL ADTVI++D+DWNP D+QA +RAHRIGQ+ + V+ +++ + +
Sbjct: 1155 GVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDVL-------VLRFETVNSVEEQV 1207
Query: 764 QAFSRAHRIGQQNKVMIYRFVTRN-SVEER 792
+A S H++G N+ + F N S E+R
Sbjct: 1208 RA-SAEHKLGVANQSITAGFFDNNTSAEDR 1236
Score = 194 (73.4 bits), Expect = 2.9e-44, Sum P(3) = 2.9e-44
Identities = 40/90 (44%), Positives = 58/90 (64%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL ADTVI++D+DWNP D+QA +RAHRIGQ+ V++ RF T NSVEE+V A+ K+
Sbjct: 1156 VNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKL 1215
Query: 802 MLTHLVVRPGM--GGKQANFTKQELDDILR 829
+ + + G A K+ L+ +LR
Sbjct: 1216 GVANQSITAGFFDNNTSAEDRKEYLESLLR 1245
Score = 43 (20.2 bits), Expect = 1.4e-28, Sum P(3) = 1.4e-28
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 633 EDIPGLKESIEFYNMTKMLDILED 656
ED GLK YN++K ++ D
Sbjct: 1921 EDSSGLKNQEALYNLSKADKLVSD 1944
Score = 42 (19.8 bits), Expect = 3.7e-56, Sum P(3) = 3.7e-56
Identities = 11/38 (28%), Positives = 22/38 (57%)
Query: 939 EVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSE 976
+V QLE + +D K+++S ++P V+ L +S+
Sbjct: 2614 DVAGQLESMSNDEKTNISS-----EQVPDVSHDLKVSQ 2646
Score = 42 (19.8 bits), Expect = 3.7e-56, Sum P(3) = 3.7e-56
Identities = 17/68 (25%), Positives = 32/68 (47%)
Query: 911 RSAKKKEMSKQERDRPLPPLLARVGGNIEVLNQLEELLSDMKSDV-SRL---PAT--LAR 964
R +KK+E + D L L+AR I++ +++ + + + + L P + A
Sbjct: 1245 RESKKEEDAPVLDDDALNDLIARRESEIDIFESIDKQRKENEMETWNTLVHGPGSDSFAH 1304
Query: 965 IPPVAQRL 972
IP + RL
Sbjct: 1305 IPSIPSRL 1312
>POMBASE|SPCC1620.14c [details] [associations]
symbol:snf22 "ATP-dependent DNA helicase Snf22"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0000991 "core RNA polymerase II binding transcription factor
activity" evidence=ISO] [GO:0003677 "DNA binding" evidence=IC]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISM]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=IGI] [GO:0007131 "reciprocal
meiotic recombination" evidence=IMP] [GO:0010972 "negative
regulation of G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0016514 "SWI/SNF complex" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEP] [GO:1900389 "regulation of glucose import
by regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:1900400 "regulation of iron ion import by
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR014978 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00384
SMART:SM00490 SMART:SM00951 PomBase:SPCC1620.14c GO:GO:0005524
GO:GO:0005819 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003677
GO:GO:0045944 GO:GO:0000122 GO:GO:0000790 GO:GO:0016514
GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0000991 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0007131
InterPro:IPR014012 PROSITE:PS51204 GO:GO:0010972
HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R EMBL:AB162437
PIR:T41628 RefSeq:NP_588472.2 ProteinModelPortal:O94421
DIP:DIP-48377N STRING:O94421 PRIDE:O94421
EnsemblFungi:SPCC1620.14c.1 GeneID:2538881 KEGG:spo:SPCC1620.14c
NextBio:20800061 GO:GO:1900389 GO:GO:1900400 Uniprot:O94421
Length = 1680
Score = 380 (138.8 bits), Expect = 9.4e-56, Sum P(2) = 9.4e-56
Identities = 114/350 (32%), Positives = 169/350 (48%)
Query: 237 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 296
+QP G L YQL+G+ W+ + N++ ILADEMGLGKTIQTI F+ L ++ +
Sbjct: 859 EQPKIF--VGGTLKDYQLKGLEWMLSLYNNNLNGILADEMGLGKTIQTIAFITYLIEKKN 916
Query: 297 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKP 356
+GPFL+ PLST+ NW EFE WAP + Y G R L+ S +N
Sbjct: 917 QQGPFLIIVPLSTLTNWIMEFEKWAPSVKKIAYKGPPQLRKTLQSQIRS----SN----- 967
Query: 357 CRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQ 416
+ +T F ++ L++ + I+ + + +L S S + Y Q
Sbjct: 968 FNVLLTT--FEYIIKDRPLLSRIKWVHMIIDEGHRIKNTQSKLTSTLSTY------YHSQ 1019
Query: 417 NKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQ----AEFAD--------ISKEEQ- 463
+L+LTGTP P+ FN + SF FA+ +++EE
Sbjct: 1020 YRLILTGTPLQNNLPELWALLNFVLPKIFNSIKSFDEWFNTPFANTGGQDKIGLNEEEAL 1079
Query: 464 --VKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPK 521
+KRLH +L P + RRLK DV K +P K E +++ LS +Q K Y+ + ++ +
Sbjct: 1080 LIIKRLHKVLRPFLFRRLKKDVEKELPDKVEKVIKCPLSGLQLKLYQQMKKHGMLFVDGE 1139
Query: 522 GGGQQVS-LLNIMMDLKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAG 570
G + L N +M LKK CNHP++F E A G + L RAAG
Sbjct: 1140 KGKTGIKGLQNTVMQLKKICNHPFIFEDV-ERAIDPSGT-NVDLLWRAAG 1187
Score = 290 (107.1 bits), Expect = 9.4e-56, Sum P(2) = 9.4e-56
Identities = 53/113 (46%), Positives = 80/113 (70%)
Query: 640 ESIEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTR 699
+++ F+ MT+++ I+EDYL + +KY R+DG+ R + +FN P + ++F+LSTR
Sbjct: 1205 KTLMFFQMTQIMTIMEDYLRSKNWKYLRLDGSTKSDDRCSLLAQFNDPKSDVYIFMLSTR 1264
Query: 700 SGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV 750
+GGLG+NL TADTVII+D+DWNPH D+QA RAHRIGQ + + L T ++
Sbjct: 1265 AGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKEVRILRLITEKSI 1317
Score = 212 (79.7 bits), Expect = 1.5e-47, Sum P(2) = 1.5e-47
Identities = 46/109 (42%), Positives = 66/109 (60%)
Query: 721 NPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMI 780
+P +D+ F + R G +NL TADTVII+D+DWNPH D+QA RAHRIGQ +V I
Sbjct: 1251 DPKSDVYIFMLSTRAGGLG--LNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKEVRI 1308
Query: 781 YRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQANFTKQELDDILR 829
R +T S+EE + A+ K+ L V++ G ++ T +E + LR
Sbjct: 1309 LRLITEKSIEENILSRAQYKLDLDGKVIQAGKFDNKS--TPEEREAFLR 1355
>ASPGD|ASPL0000041040 [details] [associations]
symbol:AN9077 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0000812 "Swr1
complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 EMBL:BN001306 GO:GO:0006351
GO:GO:0016568 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GO:GO:0008026 EMBL:AACD01000169 KO:K11681
RefSeq:XP_682346.1 STRING:Q5ARK3 GeneID:2868023 KEGG:ani:AN9077.2
HOGENOM:HOG000186095 OMA:YGNQEER OrthoDB:EOG49S9FK Uniprot:Q5ARK3
Length = 1698
Score = 249 (92.7 bits), Expect = 3.1e-55, Sum P(4) = 3.1e-55
Identities = 53/101 (52%), Positives = 63/101 (62%)
Query: 637 GLKESIEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLL 696
G ++ F MTKMLD+LE +L+ G++Y R+DG RQ DRFN F+L
Sbjct: 1388 GGHRALIFTQMTKMLDVLEQFLNIHGHRYLRLDGTTKVEQRQILTDRFNNDNRI-LAFIL 1446
Query: 697 STRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ 737
S+RSGGLGINL ADTVI YD DWNP D Q R HRIGQ
Sbjct: 1447 SSRSGGLGINLTGADTVIFYDLDWNPAMDKQCQDRCHRIGQ 1487
Score = 226 (84.6 bits), Expect = 3.1e-55, Sum P(4) = 3.1e-55
Identities = 58/143 (40%), Positives = 74/143 (51%)
Query: 207 EDEDGASGSKP-RRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWG 265
E E +S P ++ P E P L+ P L T L YQ G++WL +
Sbjct: 788 EPESVSSIEAPAEKHAQPSESPGPGLKTPI---PHLLRGT---LREYQHFGLDWLAGLYS 841
Query: 266 QNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFY 325
+I+ ILADEMGLGKTIQTI L L E GP LV P S I+NWE EF+ W P F
Sbjct: 842 NHINGILADEMGLGKTIQTIALLAHLAVEHGVWGPHLVVVPTSVILNWEMEFKKWCPGFK 901
Query: 326 VVTYVGDKDCRIVLRDHDISWED 348
++TY G+++ R R W D
Sbjct: 902 IMTYYGNQEER---RQKRRGWMD 921
Score = 190 (71.9 bits), Expect = 5.6e-49, Sum P(4) = 5.6e-49
Identities = 46/109 (42%), Positives = 61/109 (55%)
Query: 720 WNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVM 779
+N N I AF + R G INL ADTVI YD DWNP D Q R HRIGQ V
Sbjct: 1435 FNNDNRILAFILSSRSGGLG--INLTGADTVIFYDLDWNPAMDKQCQDRCHRIGQTRDVH 1492
Query: 780 IYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQANFTKQELDDIL 828
IYRFV+ ++E + + A +K ML +V++ G FTK ++ D++
Sbjct: 1493 IYRFVSEYTIESNILRKANQKRMLDDVVIQEGEFTTDY-FTKLDVRDMI 1540
Score = 176 (67.0 bits), Expect = 3.1e-55, Sum P(4) = 3.1e-55
Identities = 38/93 (40%), Positives = 54/93 (58%)
Query: 454 EFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTR 513
E D ++ V +LH +L P++LRRLKADV K MP K E +V LS Q+ Y ++R
Sbjct: 1035 ETMDDEAKQVVTKLHTVLRPYILRRLKADVEKQMPGKYEHVVYCRLSKRQRYLYDGFMSR 1094
Query: 514 NFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLF 546
+ G +S++N +M L+K CNHP LF
Sbjct: 1095 A-QTKETLASGNYLSIINCLMQLRKVCNHPDLF 1126
Score = 120 (47.3 bits), Expect = 3.1e-55, Sum P(4) = 3.1e-55
Identities = 23/60 (38%), Positives = 41/60 (68%)
Query: 366 FHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTP 425
++VL+TSY+L+ D +L W +++DEAH +K+ +S+ ++ L + + +LLLTGTP
Sbjct: 925 WNVLITSYQLVLQDQQVLKRRSWHYMILDEAHNIKNFRSQRWQALLTFRTRARLLLTGTP 984
Score = 46 (21.3 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 8/28 (28%), Positives = 18/28 (64%)
Query: 394 DEAHRL-KSNQSKFFKFLSGYSIQNKLL 420
D HR+ ++ ++F+S Y+I++ +L
Sbjct: 1480 DRCHRIGQTRDVHIYRFVSEYTIESNIL 1507
Score = 42 (19.8 bits), Expect = 3.4e-36, Sum P(4) = 3.4e-36
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 222 PPPEKPTTDLRKKYEKQ 238
PP P T+L K+ E+Q
Sbjct: 747 PPVMSPATNLLKQIERQ 763
>CGD|CAL0001763 [details] [associations]
symbol:orf19.1871 species:5476 "Candida albicans" [GO:0000812
"Swr1 complex" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
CGD:CAL0001763 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0016568 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
EMBL:AACQ01000133 EMBL:AACQ01000132 RefSeq:XP_713128.1
RefSeq:XP_713174.1 ProteinModelPortal:Q59U81 STRING:Q59U81
PRIDE:Q59U81 GeneID:3645174 GeneID:3645220 KEGG:cal:CaO19.1871
KEGG:cal:CaO19.9427 KO:K11681 Uniprot:Q59U81
Length = 1641
Score = 250 (93.1 bits), Expect = 6.9e-55, Sum P(5) = 6.9e-55
Identities = 54/94 (57%), Positives = 62/94 (65%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MTK+LDILE +L+ GY+Y R+DG RQ ++FN VF+LSTRSGGL
Sbjct: 1388 FTQMTKVLDILEQFLNIHGYRYMRLDGATKIEDRQLLTEKFNRDPKIP-VFILSTRSGGL 1446
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ 737
GINL ADTVI YDSDWNP D Q R HRIGQ
Sbjct: 1447 GINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQ 1480
Score = 222 (83.2 bits), Expect = 6.9e-55, Sum P(5) = 6.9e-55
Identities = 45/88 (51%), Positives = 56/88 (63%)
Query: 249 LHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLS 308
L YQ +G+NWL + N + ILADEMGLGKTIQTI+ L L E H GP L+ P S
Sbjct: 823 LRPYQKQGLNWLASLYNNNTNGILADEMGLGKTIQTISLLAYLACEHHKWGPHLIIVPTS 882
Query: 309 TIINWEREFETWAPDFYVVTYVGDKDCR 336
++NWE EF+ +AP F V+TY G R
Sbjct: 883 VMLNWEMEFKKFAPGFKVLTYYGSPQQR 910
Score = 177 (67.4 bits), Expect = 3.5e-47, Sum P(5) = 3.5e-47
Identities = 35/70 (50%), Positives = 45/70 (64%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INL ADTVI YDSDWNP D Q R HRIGQ V IYRFV+ ++E + + A +K
Sbjct: 1448 INLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQVRDVHIYRFVSEYTIESNIIKKANQKR 1507
Query: 802 MLTHLVVRPG 811
L ++V++ G
Sbjct: 1508 QLDNVVIQEG 1517
Score = 169 (64.5 bits), Expect = 6.9e-55, Sum P(5) = 6.9e-55
Identities = 38/90 (42%), Positives = 50/90 (55%)
Query: 457 DISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFE 516
D V RLH +L P++LRRLK DV K MP K E IV LS Q+ Y ++R +
Sbjct: 1051 DEETRNTVARLHQVLRPYLLRRLKKDVEKQMPGKYEHIVYCRLSKRQRFLYDDFMSRA-K 1109
Query: 517 ALNPKGGGQQVSLLNIMMDLKKCCNHPYLF 546
G +S++N +M L+K CNHP LF
Sbjct: 1110 TKETLASGNFLSIINCLMQLRKVCNHPDLF 1139
Score = 135 (52.6 bits), Expect = 6.9e-55, Sum P(5) = 6.9e-55
Identities = 24/60 (40%), Positives = 39/60 (65%)
Query: 366 FHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTP 425
FHV +TSY+L+ D W +++DEAH +K+ +S ++ L ++ +N+LLLTGTP
Sbjct: 923 FHVCITSYQLVVQDQQSFKRRRWTYMILDEAHNIKNFRSTRWRALLNFNTENRLLLTGTP 982
Score = 40 (19.1 bits), Expect = 3.4e-33, Sum P(5) = 3.4e-33
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 848 IIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTL 880
I+ E EN DP +V + + Q ++ L
Sbjct: 1216 ILLVEFENSDPINYVSYYQRLRREEQAEIKEKL 1248
Score = 38 (18.4 bits), Expect = 8.2e-34, Sum P(5) = 8.2e-34
Identities = 11/44 (25%), Positives = 20/44 (45%)
Query: 629 EDENEDIPGLKESIEFYNMTKMLDIL-EDYLDGEGYKYERIDGN 671
+D + +PG E I + ++K L +D++ K GN
Sbjct: 1075 KDVEKQMPGKYEHIVYCRLSKRQRFLYDDFMSRAKTKETLASGN 1118
Score = 37 (18.1 bits), Expect = 6.9e-55, Sum P(5) = 6.9e-55
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 117 NRHNINDEELEKKYYRYGIKPEWLIANRVINSKTLRDGST 156
N +++ EEL KKY E L +N + S R+ T
Sbjct: 602 NDMSLSVEELRKKYADLETSVEPLSSN--VTSDKERESET 639
>UNIPROTKB|Q6ZRS2 [details] [associations]
symbol:SRCAP "Helicase SRCAP" species:9606 "Homo sapiens"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0003713 "transcription
coactivator activity" evidence=TAS] [GO:0004402 "histone
acetyltransferase activity" evidence=TAS] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0016573 "histone acetylation" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
GO:GO:0019048 GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478
PRINTS:PR00929 GO:GO:0006357 GO:GO:0006351 GO:GO:0003713
GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC106886 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 GO:GO:0004402
EMBL:AC093249 EMBL:AK128030 EMBL:AB002307 EMBL:BC159099
EMBL:AF143946 IPI:IPI00009101 IPI:IPI00444046 IPI:IPI00550342
RefSeq:NP_006653.2 UniGene:Hs.647334 ProteinModelPortal:Q6ZRS2
SMR:Q6ZRS2 IntAct:Q6ZRS2 MINT:MINT-123408 STRING:Q6ZRS2
PhosphoSite:Q6ZRS2 DMDM:296452947 PaxDb:Q6ZRS2 PRIDE:Q6ZRS2
DNASU:10847 Ensembl:ENST00000262518 Ensembl:ENST00000344771
Ensembl:ENST00000380361 Ensembl:ENST00000395059 GeneID:10847
KEGG:hsa:10847 UCSC:uc002dze.1 UCSC:uc002dzg.1 CTD:10847
GeneCards:GC16P030710 H-InvDB:HIX0012970 HGNC:HGNC:16974
HPA:HPA028929 MIM:136140 MIM:611421 neXtProt:NX_Q6ZRS2
Orphanet:2044 PharmGKB:PA162404706 HOGENOM:HOG000168717
InParanoid:Q6ZRS2 KO:K11661 OMA:LGTGNPQ OrthoDB:EOG4B2SWB
ChiTaRS:SRCAP GenomeRNAi:10847 NextBio:41182 ArrayExpress:Q6ZRS2
Bgee:Q6ZRS2 CleanEx:HS_SRCAP Genevestigator:Q6ZRS2 Uniprot:Q6ZRS2
Length = 3230
Score = 270 (100.1 bits), Expect = 1.1e-54, Sum P(4) = 1.1e-54
Identities = 66/199 (33%), Positives = 99/199 (49%)
Query: 366 FHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTP 425
FHV +TSY+L+ D W L++DEA +K+ +S+ ++ L ++ Q +LLLTGTP
Sbjct: 718 FHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTP 777
Query: 426 XXXXXXXXXXXXXXXTPEKFNDLTSFQAEFAD-----ISKEEQ-----VKRLHDLLGPHM 475
P F F+ F++ I ++ VKRLH +L P +
Sbjct: 778 LQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFL 837
Query: 476 LRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMD 535
LRR+K DV K MP K E ++R LS Q+ Y + + G +S++NI+M
Sbjct: 838 LRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQT-TTKETLATGHFMSVINILMQ 896
Query: 536 LKKCCNHPYLFPAAAEEAP 554
L+K CNHP LF +P
Sbjct: 897 LRKVCNHPNLFDPRPVTSP 915
Score = 261 (96.9 bits), Expect = 1.1e-54, Sum P(4) = 1.1e-54
Identities = 52/94 (55%), Positives = 64/94 (68%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MT+MLD+LE +L G+ Y R+DG+ RQ ++RFNA F F+LSTRSGG+
Sbjct: 2065 FTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALMERFNADKRI-FCFILSTRSGGV 2123
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ 737
G+NL ADTV+ YDSDWNP D QA R HRIGQ
Sbjct: 2124 GVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQ 2157
Score = 209 (78.6 bits), Expect = 1.1e-54, Sum P(4) = 1.1e-54
Identities = 59/172 (34%), Positives = 80/172 (46%)
Query: 174 DENEDIPGLKESIEFYNXXXXXXXXXXXXXELQEDEDGASGSK-PRRYTPPPEKPTTDLR 232
+E+ED ++ E E Q + D SG P T P+K TD+
Sbjct: 529 EESEDAQSQSQADEEEEDDDFGVEYLLARDEEQSEADAGSGPPTPGPTTLGPKKEITDIA 588
Query: 233 KKYEKQPP---FLDDTGM----------QLHAYQLEGINWLRYSWGQNIDTILADEMGLG 279
E P L T + QL YQ G++WL + + ++ ILADEMGLG
Sbjct: 589 AAAESLQPKGYTLATTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLG 648
Query: 280 KTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVG 331
KTIQTI+ L L E GP L+ P S ++NWE E + W P F ++TY G
Sbjct: 649 KTIQTISLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYG 700
Score = 182 (69.1 bits), Expect = 1.8e-46, Sum P(4) = 1.8e-46
Identities = 37/86 (43%), Positives = 51/86 (59%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL ADTV+ YDSDWNP D QA R HRIGQ V IYR ++ +VEE + + A +K
Sbjct: 2125 VNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKR 2184
Query: 802 MLTHLVVRPGMGGKQANFTKQELDDI 827
ML + + G A F +Q + ++
Sbjct: 2185 MLGDMAIEGG-NFTTAYFKQQTIREL 2209
Score = 46 (21.3 bits), Expect = 4.2e-15, Sum P(3) = 4.2e-15
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 214 GSKPRRYTPPPEKPTTDLRKKYEKQ 238
G +PRR PPP + L EK+
Sbjct: 1869 GPRPRRQPPPPPRSPFYLDSLEEKR 1893
Score = 37 (18.1 bits), Expect = 1.1e-54, Sum P(4) = 1.1e-54
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 909 GRRSAKKKEMSKQERD 924
GR A+ +EMS+ E++
Sbjct: 2286 GRPGAEDEEMSRAEQE 2301
>DICTYBASE|DDB_G0285205 [details] [associations]
symbol:snf2a "SNF2-related protein SNF2a"
species:44689 "Dictyostelium discoideum" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 dictyBase:DDB_G0285205 GO:GO:0005524 GO:GO:0003677
EMBL:AAFI02000075 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K11647 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 RefSeq:XP_638342.2
ProteinModelPortal:Q54NM0 STRING:Q54NM0 PRIDE:Q54NM0
EnsemblProtists:DDB0233441 GeneID:8624967 KEGG:ddi:DDB_G0285205
OMA:HASKHRV Uniprot:Q54NM0
Length = 1604
Score = 255 (94.8 bits), Expect = 1.3e-54, Sum P(3) = 1.3e-54
Identities = 55/120 (45%), Positives = 75/120 (62%)
Query: 221 TPPPEKPTTDLRKKYE----KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEM 276
T P + TT L KK +QP + TG +L YQ+ G+ WL + +N++ ILADEM
Sbjct: 594 TSPLQSTTTILAKKSNNLVIEQPDLM--TGGKLKEYQVTGLEWLISLYTRNLNGILADEM 651
Query: 277 GLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR 336
GLGKT+QTI F+ L++ + + PFLV APLSTI NW EF W+P +V+ Y G +D R
Sbjct: 652 GLGKTVQTIAFISFLYERMNVREPFLVVAPLSTISNWVSEFARWSPKLHVIVYKGKQDER 711
Score = 241 (89.9 bits), Expect = 1.3e-54, Sum P(3) = 1.3e-54
Identities = 46/109 (42%), Positives = 72/109 (66%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MT++++++E+Y + + + R+DG+ R + +N P + ++F+LST +GGL
Sbjct: 960 FTQMTEVINLMEEYFSLKEWTFLRLDGSTKPEERAHLVVEWNRPDSPFWIFVLSTHAGGL 1019
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKY--INLATADTV 750
G+NL TADTVII+DSDWNP D+QA R HRIGQ N L +A+++
Sbjct: 1020 GMNLQTADTVIIFDSDWNPQMDLQAQDRCHRIGQTNSVSVFRLISANSI 1068
Score = 219 (82.2 bits), Expect = 1.3e-54, Sum P(3) = 1.3e-54
Identities = 54/169 (31%), Positives = 85/169 (50%)
Query: 366 FHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTP 425
F V++TS+E I D LG + W +++DE HR+K+ SK L Y +N+LLLTGTP
Sbjct: 723 FCVVITSFEYIIKDRKTLGRVHWIYIIIDEGHRIKNKNSKLSVQLRQYHSRNRLLLTGTP 782
Query: 426 XXXXXXXXXXXXXXXTPEKFNDLTSFQ----AEFA-------DISKEEQ---VKRLHDLL 471
P FN +FQ A F ++++EE + RLH +L
Sbjct: 783 LQNDLGELWALLNFLLPTIFNSADTFQNWFNAPFQAKGKNLINVNEEESLIIINRLHQVL 842
Query: 472 GPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNP 520
+LRRLK+DV +P K E +++ +S +Q Y+ ++ ++P
Sbjct: 843 RFFLLRRLKSDVESQLPDKKEKVIKCNMSALQIAMYRSLVEYGVLPIDP 891
Score = 201 (75.8 bits), Expect = 2.0e-50, Sum P(3) = 2.0e-50
Identities = 41/101 (40%), Positives = 60/101 (59%)
Query: 719 DWN-PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 777
+WN P + F + G +NL TADTVII+DSDWNP D+QA R HRIGQ N
Sbjct: 999 EWNRPDSPFWIFVLSTHAGGLG--MNLQTADTVIIFDSDWNPQMDLQAQDRCHRIGQTNS 1056
Query: 778 VMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQAN 818
V ++R ++ NS+EE++ A K+ + +++ GM +N
Sbjct: 1057 VSVFRLISANSIEEKILGRATDKLEIDAKIIQAGMFNTHSN 1097
Score = 143 (55.4 bits), Expect = 1.2e-46, Sum P(3) = 1.2e-46
Identities = 35/108 (32%), Positives = 61/108 (56%)
Query: 451 FQAE---FADISKEEQ---VKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQK 504
FQA+ ++++EE + RLH +L +LRRLK+DV +P K E +++ +S +Q
Sbjct: 816 FQAKGKNLINVNEEESLIIINRLHQVLRFFLLRRLKSDVESQLPDKKEKVIKCNMSALQI 875
Query: 505 KYYKYILTRNFEALNP---KGGGQQVSLL---NIMMDLKKCCNHPYLF 546
Y+ ++ ++P +G ++ + NI+ L+K CNHPYLF
Sbjct: 876 AMYRSLVEYGVLPIDPDSKEGRSGRLKMKGFNNIVKQLQKICNHPYLF 923
Score = 52 (23.4 bits), Expect = 6.0e-16, Sum P(4) = 6.0e-16
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 375 LITNDVALLGSIEWA----VLVVDEAHRL-KSNQSKFFKFLSGYSIQNKLL 420
L T D ++ +W + D HR+ ++N F+ +S SI+ K+L
Sbjct: 1023 LQTADTVIIFDSDWNPQMDLQAQDRCHRIGQTNSVSVFRLISANSIEEKIL 1073
Score = 50 (22.7 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 16/62 (25%), Positives = 31/62 (50%)
Query: 446 NDLTSFQAEFADISKEEQVKRLHDLLGPHMLRR-LKADV--LKNMPSKSEFIVRVELSPM 502
N++ + E ++ KE++++RL DL P + + + A V +K +P I E+
Sbjct: 271 NEIETLTKE-EELEKEKEIQRLRDLQKPIIYKSCIPASVENIKGLPEAIHSINEREMKIQ 329
Query: 503 QK 504
K
Sbjct: 330 AK 331
Score = 41 (19.5 bits), Expect = 5.9e-33, Sum P(4) = 5.9e-33
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 603 NSKTLRDGSTIYLVKWRDLP-YDKAT-WEDENEDIPGLKES 641
NSK R L+ ++LP + AT D++EDI G K S
Sbjct: 1155 NSKKTRQPIKPRLMIEKELPEWVLATPVTDKDEDIAGKKRS 1195
Score = 39 (18.8 bits), Expect = 5.9e-33, Sum P(4) = 5.9e-33
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 652 DILEDYLDGEGYKYERIDGNITGS 675
D +D LD EG + D NI +
Sbjct: 1266 DSSDDELDDEGISSDDDDNNINNN 1289
Score = 39 (18.8 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 497 VELSPMQKKYYKYILTRNFEALNPKGGGQQVS 528
VEL Q + YKYI +RN P G Q++S
Sbjct: 86 VELFKAQVESYKYI-SRNLPI--PVGVLQKMS 114
Score = 38 (18.4 bits), Expect = 4.5e-24, Sum P(3) = 4.5e-24
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 280 KTIQTITFLYSLFKEGH 296
KT+ + ++Y + EGH
Sbjct: 738 KTLGRVHWIYIIIDEGH 754
>UNIPROTKB|E1BC33 [details] [associations]
symbol:LOC788113 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0043234 "protein complex" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00384 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478
PRINTS:PR00929 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GeneTree:ENSGT00530000063427 OMA:LGTGNPQ
EMBL:DAAA02057908 IPI:IPI00705506 Ensembl:ENSBTAT00000018503
Uniprot:E1BC33
Length = 3242
Score = 270 (100.1 bits), Expect = 3.0e-54, Sum P(4) = 3.0e-54
Identities = 66/199 (33%), Positives = 99/199 (49%)
Query: 366 FHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTP 425
FHV +TSY+L+ D W L++DEA +K+ +S+ ++ L ++ Q +LLLTGTP
Sbjct: 726 FHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTP 785
Query: 426 XXXXXXXXXXXXXXXTPEKFNDLTSFQAEFAD-----ISKEEQ-----VKRLHDLLGPHM 475
P F F+ F++ I ++ VKRLH +L P +
Sbjct: 786 LQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFL 845
Query: 476 LRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMD 535
LRR+K DV K MP K E ++R LS Q+ Y + + G +S++NI+M
Sbjct: 846 LRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQT-TTKETLATGHFMSVINILMQ 904
Query: 536 LKKCCNHPYLFPAAAEEAP 554
L+K CNHP LF +P
Sbjct: 905 LRKVCNHPNLFDPRPVTSP 923
Score = 261 (96.9 bits), Expect = 3.0e-54, Sum P(4) = 3.0e-54
Identities = 52/94 (55%), Positives = 64/94 (68%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MT+MLD+LE +L G+ Y R+DG+ RQ ++RFNA F F+LSTRSGG+
Sbjct: 2076 FTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALMERFNADKRI-FCFILSTRSGGV 2134
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ 737
G+NL ADTV+ YDSDWNP D QA R HRIGQ
Sbjct: 2135 GVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQ 2168
Score = 205 (77.2 bits), Expect = 3.0e-54, Sum P(4) = 3.0e-54
Identities = 56/143 (39%), Positives = 73/143 (51%)
Query: 204 ELQEDEDGASGSK-PRRYTP-PPEKPTTDLRKKYEKQPP---FLDDTGM----------Q 248
E Q + DG SG P T P+K TD+ E P L T + Q
Sbjct: 566 EEQSEADGGSGPPTPGPTTTLGPKKEITDIAAAAESLQPKGYTLATTQVKTPIPLLLRGQ 625
Query: 249 LHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLS 308
L YQ G++WL + + ++ ILADEMGLGKTIQTI+ L L E GP L+ P S
Sbjct: 626 LREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVPTS 685
Query: 309 TIINWEREFETWAPDFYVVTYVG 331
++NWE E + W P F ++TY G
Sbjct: 686 VMLNWEMELKRWCPSFKILTYYG 708
Score = 182 (69.1 bits), Expect = 4.6e-46, Sum P(4) = 4.6e-46
Identities = 37/86 (43%), Positives = 51/86 (59%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL ADTV+ YDSDWNP D QA R HRIGQ V IYR ++ +VEE + + A +K
Sbjct: 2136 VNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKR 2195
Query: 802 MLTHLVVRPGMGGKQANFTKQELDDI 827
ML + + G A F +Q + ++
Sbjct: 2196 MLGDMAIEGG-NFTTAYFKQQTIREL 2220
Score = 50 (22.7 bits), Expect = 1.7e-15, Sum P(3) = 1.7e-15
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 213 SGSKPRRYTPPPEKPTTDLRKKYEKQ 238
SG +PRR PPP + L EK+
Sbjct: 1879 SGPRPRRQPPPPPRSPFYLDSLEEKR 1904
Score = 38 (18.4 bits), Expect = 1.5e-32, Sum P(3) = 1.5e-32
Identities = 8/32 (25%), Positives = 20/32 (62%)
Query: 658 LDGEGYKYERIDGNITGSMRQESIDRFNA-PG 688
L+ EG + + +G++ ++ Q+ +D ++ PG
Sbjct: 3083 LEAEGVRGRKSEGSMVVAVIQDDLDLADSGPG 3114
Score = 37 (18.1 bits), Expect = 3.0e-54, Sum P(4) = 3.0e-54
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 909 GRRSAKKKEMSKQERD 924
GR A+ +EMS+ E++
Sbjct: 2297 GRPGAEDEEMSRAEQE 2312
>SGD|S000002742 [details] [associations]
symbol:SWR1 "Swi2/Snf2-related ATPase structural component of
the SWR1 complex" species:4932 "Saccharomyces cerevisiae"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000812 "Swr1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IGI;IMP;IDA] [GO:0005198 "structural molecule
activity" evidence=IMP] [GO:0043486 "histone exchange"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SGD:S000002742 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
GO:GO:0005198 EMBL:BK006938 GO:GO:0006351 GO:GO:0000812
GO:GO:0004386 GO:GO:0043486 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:U51032 KO:K11681 HOGENOM:HOG000186095 OrthoDB:EOG49S9FK
PIR:S70099 RefSeq:NP_010621.1 ProteinModelPortal:Q05471 SMR:Q05471
DIP:DIP-2845N IntAct:Q05471 MINT:MINT-1165514 STRING:Q05471
PaxDb:Q05471 EnsemblFungi:YDR334W GeneID:851934 KEGG:sce:YDR334W
CYGD:YDR334w OMA:APGFKVL NextBio:970001 Genevestigator:Q05471
GermOnline:YDR334W Uniprot:Q05471
Length = 1514
Score = 248 (92.4 bits), Expect = 3.2e-54, Sum P(4) = 3.2e-54
Identities = 53/94 (56%), Positives = 61/94 (64%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MTK+LD+LE +L+ GY Y R+DG RQ +RFN VF+LS+RSGGL
Sbjct: 1268 FTQMTKVLDVLEQFLNYHGYLYMRLDGATKIEDRQILTERFNTDSRIT-VFILSSRSGGL 1326
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ 737
GINL ADTVI YDSDWNP D Q R HRIGQ
Sbjct: 1327 GINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQ 1360
Score = 211 (79.3 bits), Expect = 3.2e-54, Sum P(4) = 3.2e-54
Identities = 43/88 (48%), Positives = 55/88 (62%)
Query: 249 LHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLS 308
L YQ +G+NWL + + + ILADEMGLGKTIQTI+ L L E GP L+ P S
Sbjct: 696 LRTYQKQGLNWLASLYNNHTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTS 755
Query: 309 TIINWEREFETWAPDFYVVTYVGDKDCR 336
++NWE EF+ +AP F V+TY G R
Sbjct: 756 VLLNWEMEFKRFAPGFKVLTYYGSPQQR 783
Score = 186 (70.5 bits), Expect = 1.4e-47, Sum P(4) = 1.4e-47
Identities = 44/109 (40%), Positives = 61/109 (55%)
Query: 720 WNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVM 779
+N + I F + R G INL ADTVI YDSDWNP D Q R HRIGQ V
Sbjct: 1308 FNTDSRITVFILSSRSGGLG--INLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVH 1365
Query: 780 IYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQANFTKQELDDIL 828
IYRFV+ +++E + + A +K L ++V++ G F+K + D+L
Sbjct: 1366 IYRFVSEHTIESNILKKANQKRQLDNVVIQEG-DFTTDYFSKLSVRDLL 1413
Score = 174 (66.3 bits), Expect = 3.2e-54, Sum P(4) = 3.2e-54
Identities = 38/90 (42%), Positives = 55/90 (61%)
Query: 457 DISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFE 516
D ++ V +LH +L P++LRRLKADV K MP+K E IV +LS Q+ Y ++R +
Sbjct: 911 DKETKKTVAKLHQVLRPYLLRRLKADVEKQMPAKYEHIVYCKLSKRQRFLYDDFMSRA-Q 969
Query: 517 ALNPKGGGQQVSLLNIMMDLKKCCNHPYLF 546
G +S++N +M L+K CNHP LF
Sbjct: 970 TKATLASGNFMSIVNCLMQLRKVCNHPNLF 999
Score = 126 (49.4 bits), Expect = 3.2e-54, Sum P(4) = 3.2e-54
Identities = 30/98 (30%), Positives = 46/98 (46%)
Query: 366 FHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTP 425
FHV + SY+L+ D W +V+DEAH +K+ +S ++ L ++ Q +LLLTGTP
Sbjct: 796 FHVCIVSYQLVVQDQHSFKRKRWQYMVLDEAHNIKNFRSTRWQALLNFNTQRRLLLTGTP 855
Query: 426 XXXXXXXXXXXXXXXTPEKFNDLTSFQAEFADISKEEQ 463
P+ D FAD+ +Q
Sbjct: 856 LQNNLAELWSLLYFLMPQTVIDGKKVSG-FADLDAFQQ 892
Score = 40 (19.1 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 442 PEKFNDLTSFQAEFAD--ISKEEQVKRLHD 469
P FND SFQ + +S EE+ ++ D
Sbjct: 48 PTHFNDSESFQKFLRETHLSLEERGEKFTD 77
>DICTYBASE|DDB_G0267638 [details] [associations]
symbol:DDB_G0267638 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 dictyBase:DDB_G0267638 GO:GO:0005524
GO:GO:0003677 EMBL:AAFI02000003 GO:GO:0003682 SUPFAM:SSF46689
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR014012 PROSITE:PS51204 KO:K11320 RefSeq:XP_647182.1
ProteinModelPortal:Q55GK2 EnsemblProtists:DDB0220518 GeneID:8615986
KEGG:ddi:DDB_G0267638 InParanoid:Q55GK2 OMA:ISFEAFA Uniprot:Q55GK2
Length = 3069
Score = 269 (99.8 bits), Expect = 3.8e-54, Sum P(4) = 3.8e-54
Identities = 70/225 (31%), Positives = 111/225 (49%)
Query: 342 HDISWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKS 401
H S + ANR G S + FHV +TSY ++ +D + +W +++DEAH +K+
Sbjct: 862 HGTSRDRKANRKGW-----SKSNAFHVCITSYSMVMSDHLIFRRKKWVYMILDEAHVIKN 916
Query: 402 NQSKFFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFA----- 456
+++ ++ + ++ + +LLLTGTP P+ F FQ F+
Sbjct: 917 FKTQRWQNMLHFNTERRLLLTGTPLQNNLMELWSLMHFLMPDIFQSHREFQDWFSNPVTG 976
Query: 457 -----DISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYIL 511
D E+ + RLH +L P +LRRLK DV K MP K IV +S QK Y+ +
Sbjct: 977 MIEGGDDVNEDIINRLHAVLRPFLLRRLKKDVEKQMPPKHTHIVPCSMSRRQKFLYEEFI 1036
Query: 512 TRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAPVQ 556
+ + G S++NI+M L+K CNHP LF +P++
Sbjct: 1037 NSS-STQSTLSSGSFFSIINILMQLRKVCNHPDLFEIRPIVSPLE 1080
Score = 258 (95.9 bits), Expect = 3.8e-54, Sum P(4) = 3.8e-54
Identities = 54/101 (53%), Positives = 66/101 (65%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MTKMLDI E +L+ Y Y R+DG+ RQ +RFN F+F+LSTRSGGL
Sbjct: 1401 FTQMTKMLDIFETFLNLHAYTYLRLDGSTKIDKRQVLTERFNTD-PKIFLFILSTRSGGL 1459
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINL 744
G+NL ADTVI YD+DWNP D QA R HRIGQ + +N+
Sbjct: 1460 GLNLTGADTVIFYDTDWNPSMDAQAQDRCHRIGQTRE-VNI 1499
Score = 192 (72.6 bits), Expect = 3.8e-54, Sum P(4) = 3.8e-54
Identities = 47/120 (39%), Positives = 66/120 (55%)
Query: 212 ASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTI 271
A+ S+P +T T+++R K PFL L YQ G++WL + +N++ I
Sbjct: 754 ANSSQPTGFT----LNTSNVRTKV----PFL--LKFPLREYQHIGLDWLVSLYEKNLNGI 803
Query: 272 LADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVG 331
LADEMGLGKTI TI+ + L + GP L+ P S + NWE EF+ W P + TY G
Sbjct: 804 LADEMGLGKTIMTISLIAYLAVQKGVWGPHLIVVPSSVLFNWEMEFKRWCPGLKIFTYHG 863
Score = 191 (72.3 bits), Expect = 4.4e-47, Sum P(3) = 4.4e-47
Identities = 34/70 (48%), Positives = 49/70 (70%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL ADTVI YD+DWNP D QA R HRIGQ +V IYRF+T++++EE + + + +K
Sbjct: 1461 LNLTGADTVIFYDTDWNPSMDAQAQDRCHRIGQTREVNIYRFITQHTIEENILKKSNQKR 1520
Query: 802 MLTHLVVRPG 811
L +V++ G
Sbjct: 1521 QLDKMVIKAG 1530
Score = 52 (23.4 bits), Expect = 3.8e-54, Sum P(4) = 3.8e-54
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 756 DWNPHNDIQAFSRAHRIGQQNKVMI 780
D N ND + R R+G+ KVMI
Sbjct: 1965 DENEGNDFEGGGRGGRVGEGKKVMI 1989
Score = 45 (20.9 bits), Expect = 6.0e-31, Sum P(4) = 6.0e-31
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 486 NMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLL 530
N S S ++V + ++P+Q++ + NF L + ++LL
Sbjct: 1282 NYMSYSNYLVDLIMTPIQRQQSMIKIIENFTFLISTARAEPITLL 1326
Score = 40 (19.1 bits), Expect = 6.7e-53, Sum P(4) = 6.7e-53
Identities = 11/48 (22%), Positives = 21/48 (43%)
Query: 757 WNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLT 804
W+ D G+ N +I F+ +NS R+ +V + K ++
Sbjct: 2359 WSQQEDKLILDNVKNFGE-NWDLI-TFIIQNSNYSRINRVTRSKSQIS 2404
Score = 39 (18.8 bits), Expect = 2.7e-30, Sum P(4) = 2.7e-30
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 719 DWNPHNDIQAFSRAHRIGQQNK 740
D N ND + R R+G+ K
Sbjct: 1965 DENEGNDFEGGGRGGRVGEGKK 1986
>TAIR|locus:2087780 [details] [associations]
symbol:PIE1 "PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0009910 "negative regulation of flower development"
evidence=IGI] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0048441 "petal development" evidence=IGI] [GO:0048451 "petal
formation" evidence=IGI;RCA] [GO:0005618 "cell wall" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042742 "defense
response to bacterium" evidence=IGI;RCA] [GO:0046686 "response to
cadmium ion" evidence=IEP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0003002 "regionalization" evidence=RCA]
[GO:0006338 "chromatin remodeling" evidence=RCA] [GO:0007155 "cell
adhesion" evidence=RCA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0033043 "regulation of
organelle organization" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0048449 "floral organ formation"
evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005618
GO:GO:0046686 EMBL:CP002686 GO:GO:0003677 GO:GO:0042742
GO:GO:0003682 Gene3D:1.10.10.60 GO:GO:0016514 GO:GO:0004386
GO:GO:0009910 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 KO:K11320 GO:GO:0048451
EMBL:AY279398 IPI:IPI00545059 RefSeq:NP_187887.3 UniGene:At.39549
SMR:Q7X9V2 IntAct:Q7X9V2 STRING:Q7X9V2 EnsemblPlants:AT3G12810.1
GeneID:820463 KEGG:ath:AT3G12810 TAIR:At3g12810 InParanoid:Q7X9V2
OMA:CCHPPPS ProtClustDB:CLSN2680833 Genevestigator:Q7X9V2
Uniprot:Q7X9V2
Length = 2055
Score = 264 (98.0 bits), Expect = 1.1e-53, Sum P(4) = 1.1e-53
Identities = 55/101 (54%), Positives = 67/101 (66%)
Query: 637 GLKESIEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLL 696
G ++ F MTKMLD+LE +++ GY Y R+DG+ RQ + RFN F+F+L
Sbjct: 1090 GGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDGSTPPEERQTLMQRFNT-NPKIFLFIL 1148
Query: 697 STRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ 737
STRSGG+GINL ADTVI YDSDWNP D QA R HRIGQ
Sbjct: 1149 STRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQ 1189
Score = 256 (95.2 bits), Expect = 1.1e-53, Sum P(4) = 1.1e-53
Identities = 60/191 (31%), Positives = 98/191 (51%)
Query: 366 FHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTP 425
FHV +T+Y L+ D + +W L++DEAH +K+ +S+ ++ L ++ + ++LLTGTP
Sbjct: 636 FHVCITTYRLVIQDSKMFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTP 695
Query: 426 XXXXXXXXXXXXXXXTPEKFNDLTSFQAEFAD-----ISKEEQVK-----RLHDLLGPHM 475
P F F+ F + + +E++ RLH++L P +
Sbjct: 696 LQNDLMELWSLMHFLMPHVFQSHQEFKDWFCNPIAGMVEGQEKINKEVIDRLHNVLRPFL 755
Query: 476 LRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMD 535
LRRLK DV K +PSK E ++ LS Q+ Y+ + E G +++I+M
Sbjct: 756 LRRLKRDVEKQLPSKHEHVIFCRLSKRQRNLYEDFIAST-ETQATLTSGSFFGMISIIMQ 814
Query: 536 LKKCCNHPYLF 546
L+K CNHP LF
Sbjct: 815 LRKVCNHPDLF 825
Score = 197 (74.4 bits), Expect = 1.1e-53, Sum P(4) = 1.1e-53
Identities = 51/132 (38%), Positives = 66/132 (50%)
Query: 204 ELQEDEDGASGSK--PRRYTPPPEKPT--TDLRKKYEKQPPFLDDTGMQLHAYQLEGINW 259
E+ ED D S K +PT T K + PFL L YQ G++W
Sbjct: 489 EVAEDNDKDSSDKIADAAAAARSAQPTGFTYSTTKVRTKLPFL--LKHSLREYQHIGLDW 546
Query: 260 LRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFET 319
L + + ++ ILADEMGLGKTI TI L L + GP L+ P S ++NWE EF
Sbjct: 547 LVTMYEKKLNGILADEMGLGKTIMTIALLAHLACDKGIWGPHLIVVPTSVMLNWETEFLK 606
Query: 320 WAPDFYVVTYVG 331
W P F ++TY G
Sbjct: 607 WCPAFKILTYFG 618
Score = 188 (71.2 bits), Expect = 1.7e-46, Sum P(3) = 1.7e-46
Identities = 36/70 (51%), Positives = 49/70 (70%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INL ADTVI YDSDWNP D QA R HRIGQ +V IYR ++ +++EE + + A +K
Sbjct: 1157 INLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKR 1216
Query: 802 MLTHLVVRPG 811
+L +LV++ G
Sbjct: 1217 VLDNLVIQNG 1226
Score = 42 (19.8 bits), Expect = 1.1e-53, Sum P(4) = 1.1e-53
Identities = 22/103 (21%), Positives = 48/103 (46%)
Query: 731 RAHRIGQQNKYINLATA--DTVIIYDSDWNPHNDIQAFS--RAHRIGQQNKVMIYRFVTR 786
+ R+ +N+Y N A A + + S+ P ND+++ + +A +G+ ++
Sbjct: 1916 KGSRVAAENRYRNAANACIEDSFGWASNTFPANDLKSRTGTKAQSLGK------HKLSAS 1969
Query: 787 NSVEERVTQVAKRKMMLTHLV---VRPGMGGKQANFTKQELDD 826
+S + T+ RK++ L VRP + +FT + ++
Sbjct: 1970 DSAKS--TKSKHRKLLAEQLEGAWVRPNDPNLKFDFTPGDREE 2010
>UNIPROTKB|F1RG74 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043234 "protein complex" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
GeneTree:ENSGT00530000063427 OMA:LGTGNPQ EMBL:FP102572
Ensembl:ENSSSCT00000008537 Uniprot:F1RG74
Length = 3230
Score = 270 (100.1 bits), Expect = 1.6e-53, Sum P(5) = 1.6e-53
Identities = 66/199 (33%), Positives = 99/199 (49%)
Query: 366 FHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTP 425
FHV +TSY+L+ D W L++DEA +K+ +S+ ++ L ++ Q +LLLTGTP
Sbjct: 725 FHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTP 784
Query: 426 XXXXXXXXXXXXXXXTPEKFNDLTSFQAEFAD-----ISKEEQ-----VKRLHDLLGPHM 475
P F F+ F++ I ++ VKRLH +L P +
Sbjct: 785 LQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFL 844
Query: 476 LRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMD 535
LRR+K DV K MP K E ++R LS Q+ Y + + G +S++NI+M
Sbjct: 845 LRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQT-TTKETLATGHFMSVINILMQ 903
Query: 536 LKKCCNHPYLFPAAAEEAP 554
L+K CNHP LF +P
Sbjct: 904 LRKVCNHPNLFDPRPVTSP 922
Score = 261 (96.9 bits), Expect = 1.6e-53, Sum P(5) = 1.6e-53
Identities = 52/94 (55%), Positives = 64/94 (68%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MT+MLD+LE +L G+ Y R+DG+ RQ ++RFNA F F+LSTRSGG+
Sbjct: 2065 FTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALMERFNADKRI-FCFILSTRSGGV 2123
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ 737
G+NL ADTV+ YDSDWNP D QA R HRIGQ
Sbjct: 2124 GVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQ 2157
Score = 201 (75.8 bits), Expect = 1.6e-53, Sum P(5) = 1.6e-53
Identities = 40/84 (47%), Positives = 53/84 (63%)
Query: 248 QLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPL 307
QL YQ G++WL + + ++ ILADEMGLGKTIQTI+ L L E GP L+ P
Sbjct: 624 QLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVPT 683
Query: 308 STIINWEREFETWAPDFYVVTYVG 331
S ++NWE E + W P F ++TY G
Sbjct: 684 SVMLNWEMELKRWCPSFKILTYYG 707
Score = 182 (69.1 bits), Expect = 5.9e-44, Sum P(6) = 5.9e-44
Identities = 37/86 (43%), Positives = 51/86 (59%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL ADTV+ YDSDWNP D QA R HRIGQ V IYR ++ +VEE + + A +K
Sbjct: 2125 VNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKR 2184
Query: 802 MLTHLVVRPGMGGKQANFTKQELDDI 827
ML + + G A F +Q + ++
Sbjct: 2185 MLGDMAIEGG-NFTTAYFKQQTIREL 2209
Score = 50 (22.7 bits), Expect = 2.0e-14, Sum P(4) = 2.0e-14
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 213 SGSKPRRYTPPPEKPTTDLRKKYEKQ 238
SG +PRR PPP + L EK+
Sbjct: 1868 SGPRPRRQPPPPPRSPFYLDSLEEKR 1893
Score = 43 (20.2 bits), Expect = 1.6e-53, Sum P(5) = 1.6e-53
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 914 KKKEMSKQERDRPLPPLLARVGGNIEVLNQ 943
+++ + RD P+P ++ GNIE Q
Sbjct: 2939 RRRGRPPKARDLPIPGTISSGDGNIESRTQ 2968
Score = 40 (19.1 bits), Expect = 1.6e-53, Sum P(5) = 1.6e-53
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 204 ELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYE 236
E + + DG SG PP PTT L K E
Sbjct: 565 EERSEADGGSG-------PPTPGPTTTLGPKKE 590
Score = 37 (18.1 bits), Expect = 5.6e-52, Sum P(6) = 5.6e-52
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 926 PLPPLLA 932
PLPPLLA
Sbjct: 2978 PLPPLLA 2984
Score = 37 (18.1 bits), Expect = 5.6e-52, Sum P(6) = 5.6e-52
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 909 GRRSAKKKEMSKQERD 924
GR A+ +EMS+ E++
Sbjct: 2286 GRPGAEDEEMSRAEQE 2301
Score = 37 (18.1 bits), Expect = 5.1e-31, Sum P(4) = 5.1e-31
Identities = 8/32 (25%), Positives = 19/32 (59%)
Query: 658 LDGEGYKYERIDGNITGSMRQESIDRFNA-PG 688
L+ EG + + +G++ ++ Q+ +D + PG
Sbjct: 3071 LEAEGIRGRKSEGSMVVAVIQDDLDLAESGPG 3102
>POMBASE|SPAC11E3.01c [details] [associations]
symbol:swr1 "SNF2 family helicase Swr1" species:4896
"Schizosaccharomyces pombe" [GO:0000812 "Swr1 complex"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISM] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IPI] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043486 "histone exchange" evidence=ISO] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC11E3.01c GO:GO:0005524
EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006351 GO:GO:0000812 GO:GO:0004003 GO:GO:0043486
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 PROSITE:PS51204 KO:K11681 HOGENOM:HOG000186095
OrthoDB:EOG49S9FK PIR:T37528 RefSeq:XP_001713118.1
ProteinModelPortal:O13682 STRING:O13682 EnsemblFungi:SPAC11E3.01c.1
GeneID:3361561 KEGG:spo:SPAC11E3.01c OMA:VKNEREG NextBio:20811602
Uniprot:O13682
Length = 1288
Score = 258 (95.9 bits), Expect = 2.1e-53, Sum P(4) = 2.1e-53
Identities = 55/94 (58%), Positives = 64/94 (68%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MTK+LDILE +L+ G++Y R+DG RQ +RFN VF+LSTRSGGL
Sbjct: 1013 FTQMTKVLDILEQFLNIHGHRYLRLDGATKIEQRQILTERFNNDDKIP-VFILSTRSGGL 1071
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ 737
GINL ADTVI YDSDWNP D QA R+HRIGQ
Sbjct: 1072 GINLTGADTVIFYDSDWNPQLDAQAQDRSHRIGQ 1105
Score = 209 (78.6 bits), Expect = 2.1e-53, Sum P(4) = 2.1e-53
Identities = 67/201 (33%), Positives = 92/201 (45%)
Query: 142 ANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENE----DIP----GLKESIEF-YNXX 192
A + N + DG I + K D+ +T +D N+ ++P G S+ YN
Sbjct: 336 AKKSYNHVSDLDGEVIVMKK-EDITDGVSTKKDLNDGDQNEVPLHDTGSSSSLSLLYNED 394
Query: 193 XXXXXXXXXXXE-LQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHA 251
+ L + A S+ R++ P P K Q PFL G L
Sbjct: 395 VASKKKRRVNDDGLARKKSIAGISEQRKFDEPNGSPVLHANKI---QVPFLF-RGT-LRE 449
Query: 252 YQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTII 311
YQ G+ WL N + ILADEMGLGKTIQTI L L E GP L+ P S ++
Sbjct: 450 YQQYGLEWLTALHDSNTNGILADEMGLGKTIQTIALLAHLACEKENWGPHLIIVPTSVML 509
Query: 312 NWEREFETWAPDFYVVTYVGD 332
NWE EF+ + P F ++TY G+
Sbjct: 510 NWEMEFKKFLPGFKILTYYGN 530
Score = 182 (69.1 bits), Expect = 3.2e-45, Sum P(4) = 3.2e-45
Identities = 41/92 (44%), Positives = 54/92 (58%)
Query: 720 WNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVM 779
+N + I F + R G INL ADTVI YDSDWNP D QA R+HRIGQ V
Sbjct: 1053 FNNDDKIPVFILSTRSGGLG--INLTGADTVIFYDSDWNPQLDAQAQDRSHRIGQTRDVH 1110
Query: 780 IYRFVTRNSVEERVTQVAKRKMMLTHLVVRPG 811
IYR ++ +VE + + A +K ML +V++ G
Sbjct: 1111 IYRLISEYTVESNMLRRANQKRMLDKIVIQGG 1142
Score = 157 (60.3 bits), Expect = 2.1e-53, Sum P(4) = 2.1e-53
Identities = 39/104 (37%), Positives = 57/104 (54%)
Query: 454 EFADISKEEQ--VKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYIL 511
E D++ E V +LH +L P++LRRLK +V K MP+K E +V +LS Q+ Y +
Sbjct: 653 EGQDMNPEAMNTVAKLHRVLRPYLLRRLKTEVEKQMPAKYEHVVYCQLSKRQRFLYDDFI 712
Query: 512 TRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAPV 555
R G +S++N +M L+K CNHP L EE P+
Sbjct: 713 NRA-RTREILASGNFMSIINCLMQLRKVCNHPNLH----EERPI 751
Score = 123 (48.4 bits), Expect = 2.1e-53, Sum P(4) = 2.1e-53
Identities = 22/60 (36%), Positives = 41/60 (68%)
Query: 366 FHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTP 425
+HV +TSY+L+ D +W +++DEAH +K+ +S+ ++ L ++ +++LLLTGTP
Sbjct: 547 WHVCITSYQLVLQDHQPFRRKKWQYMILDEAHNIKNFRSQRWQSLLNFNAEHRLLLTGTP 606
Score = 37 (18.1 bits), Expect = 5.3e-33, Sum P(3) = 5.3e-33
Identities = 6/13 (46%), Positives = 8/13 (61%)
Query: 355 KPCRIRSSTVKFH 367
KPC+ + S K H
Sbjct: 833 KPCQFKKSNFKEH 845
>ZFIN|ZDB-GENE-091113-61 [details] [associations]
symbol:si:dkey-76p7.6 "si:dkey-76p7.6" species:7955
"Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-091113-61 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000729 GO:GO:0035861 GeneTree:ENSGT00630000089890
EMBL:BX927385 IPI:IPI00901431 Ensembl:ENSDART00000113101
Bgee:E7F1C4 Uniprot:E7F1C4
Length = 954
Score = 393 (143.4 bits), Expect = 8.9e-53, Sum P(2) = 8.9e-53
Identities = 110/316 (34%), Positives = 160/316 (50%)
Query: 238 QPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHC 297
QP L T QL YQL G+NWL + ILADEMGLGKTIQ I+FL L++EG+
Sbjct: 419 QPEILSST-FQLKPYQLIGLNWLVLLHQNKLSGILADEMGLGKTIQAISFLAHLYQEGN- 476
Query: 298 KGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPC 357
GP L++ P ST+ NW RE W P F V+ Y G D R +R ++ N
Sbjct: 477 HGPHLITVPASTLDNWVRELNLWCPSFKVLVYYGSADDRKYMRYEILNQIVEYN------ 530
Query: 358 RIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQN 417
I ST +++ + + ++D +L ++ V DE H LK+ S ++ L + +
Sbjct: 531 -IIVST--YNLAIGN----SSDRSLFCKLKLEYAVFDEGHLLKNMNSLRYRHLMAINAKY 583
Query: 418 KLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAE-FADISKEEQVKRLHD------- 469
+LLLTGTP P F+ TS A+ F+ S EEQ D
Sbjct: 584 RLLLTGTPLQNNLLELMSLLNFIMPNMFSSSTSQIAKMFSMKSSEEQSSFERDRITHAKL 643
Query: 470 LLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSL 529
++ P +LRR+K++VLK +P+K E + +S Q++ Y +L + L G++ L
Sbjct: 644 IMKPFILRRVKSEVLKQLPAKEEQVEFCAMSERQQELYSALLHK----LKHSSNGEKREL 699
Query: 530 LNIMMDLKKCCNHPYL 545
N+MM L+K NHP L
Sbjct: 700 TNVMMQLRKMSNHPLL 715
Score = 240 (89.5 bits), Expect = 8.9e-53, Sum P(2) = 8.9e-53
Identities = 54/109 (49%), Positives = 70/109 (64%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F T MLDILE +L ++Y R+DG+ S R ID+FN FVFLLSTR+GGL
Sbjct: 804 FSQFTMMLDILEVFLRHHKHRYNRLDGSTPMSDRIGLIDQFNTD-QDIFVFLLSTRAGGL 862
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV 750
GINL +A+ VI++D D NP+ND QA R HR+GQ K I L + D++
Sbjct: 863 GINLTSANVVILHDIDCNPYNDKQAEGRCHRVGQTKTVKVIKLISKDSI 911
Score = 158 (60.7 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 33/94 (35%), Positives = 57/94 (60%)
Query: 710 ADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRA 769
+D + + D +N DI F + R G INL +A+ VI++D D NP+ND QA R
Sbjct: 835 SDRIGLIDQ-FNTDQDIFVFLLSTRAGGLG--INLTSANVVILHDIDCNPYNDKQAEGRC 891
Query: 770 HRIGQQNKVMIYRFVTRNSVEERVTQVAKRKMML 803
HR+GQ V + + ++++S+E+ + ++ +RK+ L
Sbjct: 892 HRVGQTKTVKVIKLISKDSIEDTMLRIGERKLKL 925
Score = 37 (18.1 bits), Expect = 9.3e-15, Sum P(2) = 9.3e-15
Identities = 8/30 (26%), Positives = 18/30 (60%)
Query: 127 EKKYYRYGIKPEWLIANRVINSKTLRDGST 156
++KY RY I + + N ++++ L G++
Sbjct: 514 DRKYMRYEILNQIVEYNIIVSTYNLAIGNS 543
>RGD|1565642 [details] [associations]
symbol:Srcap "Snf2-related CREBBP activator protein"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00384 SMART:SM00490 RGD:1565642
GO:GO:0005524 GO:GO:0005634 GO:GO:0005794 GO:GO:0043234
GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 OrthoDB:EOG4B2SWB
IPI:IPI00778475 Ensembl:ENSRNOT00000054997 UCSC:RGD:1565642
ArrayExpress:D3ZWX7 Uniprot:D3ZWX7
Length = 3182
Score = 270 (100.1 bits), Expect = 1.2e-52, Sum P(5) = 1.2e-52
Identities = 66/199 (33%), Positives = 99/199 (49%)
Query: 366 FHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTP 425
FHV +TSY+L+ D W L++DEA +K+ +S+ ++ L ++ Q +LLLTGTP
Sbjct: 728 FHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTP 787
Query: 426 XXXXXXXXXXXXXXXTPEKFNDLTSFQAEFAD-----ISKEEQ-----VKRLHDLLGPHM 475
P F F+ F++ I ++ VKRLH +L P +
Sbjct: 788 LQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFL 847
Query: 476 LRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMD 535
LRR+K DV K MP K E ++R LS Q+ Y + + G +S++NI+M
Sbjct: 848 LRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQT-TTKETLATGHFMSVINILMQ 906
Query: 536 LKKCCNHPYLFPAAAEEAP 554
L+K CNHP LF +P
Sbjct: 907 LRKVCNHPNLFDPRPVTSP 925
Score = 261 (96.9 bits), Expect = 1.2e-52, Sum P(5) = 1.2e-52
Identities = 52/94 (55%), Positives = 64/94 (68%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MT+MLD+LE +L G+ Y R+DG+ RQ ++RFNA F F+LSTRSGG+
Sbjct: 2053 FTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALMERFNADKRI-FCFILSTRSGGV 2111
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ 737
G+NL ADTV+ YDSDWNP D QA R HRIGQ
Sbjct: 2112 GVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQ 2145
Score = 201 (75.8 bits), Expect = 1.2e-52, Sum P(5) = 1.2e-52
Identities = 40/84 (47%), Positives = 53/84 (63%)
Query: 248 QLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPL 307
QL YQ G++WL + + ++ ILADEMGLGKTIQTI+ L L E GP L+ P
Sbjct: 627 QLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVPT 686
Query: 308 STIINWEREFETWAPDFYVVTYVG 331
S ++NWE E + W P F ++TY G
Sbjct: 687 SVMLNWEMELKRWCPSFKILTYYG 710
Score = 182 (69.1 bits), Expect = 1.6e-44, Sum P(5) = 1.6e-44
Identities = 37/86 (43%), Positives = 51/86 (59%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
+NL ADTV+ YDSDWNP D QA R HRIGQ V IYR ++ +VEE + + A +K
Sbjct: 2113 VNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKR 2172
Query: 802 MLTHLVVRPGMGGKQANFTKQELDDI 827
ML + + G A F +Q + ++
Sbjct: 2173 MLGDMAIEGG-NFTTAYFKQQTIREL 2197
Score = 50 (22.7 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 213 SGSKPRRYTPPPEKPTTDLRKKYEKQ 238
SG +PRR PPP + L EK+
Sbjct: 1855 SGPRPRRQPPPPPRSPFYLDSLEEKR 1880
Score = 37 (18.1 bits), Expect = 1.2e-52, Sum P(5) = 1.2e-52
Identities = 12/31 (38%), Positives = 14/31 (45%)
Query: 206 QEDEDGASGSKPRRYTPPPEKPTTDLRKKYE 236
+ + DG SG PP PTT L K E
Sbjct: 570 RSEVDGGSG-------PPTPGPTTTLGPKKE 593
Score = 37 (18.1 bits), Expect = 1.2e-52, Sum P(5) = 1.2e-52
Identities = 12/39 (30%), Positives = 17/39 (43%)
Query: 173 EDEN--EDIPGLKESIEFYNXXXXXXXXXXXXXELQEDE 209
EDE+ E++ G +S E + E QEDE
Sbjct: 512 EDEHSEEEMSGSSQSEESESDESEDAQSQSQADEEQEDE 550
>FB|FBgn0020306 [details] [associations]
symbol:dom "domino" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=IEA;NAS] [GO:0008283 "cell
proliferation" evidence=NAS] [GO:0016458 "gene silencing"
evidence=IGI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0002165 "instar larval or pupal development"
evidence=IMP] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0048477 "oogenesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0035207 "negative regulation of hemocyte
proliferation" evidence=TAS] [GO:0030097 "hemopoiesis"
evidence=TAS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000381 "regulation of alternative
mRNA splicing, via spliceosome" evidence=IMP] [GO:0000123 "histone
acetyltransferase complex" evidence=IPI] [GO:0045747 "positive
regulation of Notch signaling pathway" evidence=IGI] [GO:0035222
"wing disc pattern formation" evidence=IGI] [GO:0010629 "negative
regulation of gene expression" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0070983 "dendrite guidance"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP] [GO:2000637
"positive regulation of gene silencing by miRNA" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 EMBL:AE013599 GO:GO:0005524
GO:GO:0006355 GO:GO:0003677 GO:GO:0035222 GO:GO:0048477
GO:GO:0016573 GO:GO:0045747 GO:GO:0006351 GO:GO:0007049
GO:GO:0035267 GO:GO:0004386 GO:GO:0030097 GO:GO:0043486
GO:GO:2000637 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016458 InterPro:IPR017877
PROSITE:PS50090 GO:GO:0070983 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0008094 GO:GO:0000381 EMBL:AF076776 EMBL:AF254373
EMBL:AY058653 RefSeq:NP_524833.2 RefSeq:NP_788424.1 UniGene:Dm.7802
ProteinModelPortal:Q9NDJ2 SMR:Q9NDJ2 IntAct:Q9NDJ2 STRING:Q9NDJ2
PaxDb:Q9NDJ2 EnsemblMetazoa:FBtr0071603 GeneID:45655
KEGG:dme:Dmel_CG9696 UCSC:CG9696-RA CTD:45655 FlyBase:FBgn0020306
GeneTree:ENSGT00530000063427 InParanoid:Q9NDJ2 KO:K11320
OMA:TENDASA OrthoDB:EOG4C5B08 PhylomeDB:Q9NDJ2 GenomeRNAi:45655
NextBio:838265 Bgee:Q9NDJ2 GO:GO:0002165 GO:GO:0035207
Uniprot:Q9NDJ2
Length = 3198
Score = 267 (99.0 bits), Expect = 1.8e-51, Sum P(5) = 1.8e-51
Identities = 64/201 (31%), Positives = 103/201 (51%)
Query: 366 FHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTP 425
FHV +TSY+L+ D +W L++DEA +K+ +S+ ++ L +S + +LLLTGTP
Sbjct: 1014 FHVCITSYKLVVQDQQSFRRKKWKYLILDEAQNIKNFKSQRWQLLLNFSTERRLLLTGTP 1073
Query: 426 XXXXXXXXXXXXXXXTPEKFNDLTSFQAEFAD-----IS-----KEEQVKRLHDLLGPHM 475
P F+ F+ F++ I E + RLH ++ P +
Sbjct: 1074 LQNDLMELWSLMHFLMPYVFSSHREFKEWFSNPMTGMIEGNMEYNETLITRLHKVIRPFL 1133
Query: 476 LRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMD 535
LRRLK +V K MP K E ++ LS Q+ Y+ ++R + G +S++N++M
Sbjct: 1134 LRRLKKEVEKQMPKKYEHVITCRLSNRQRYLYEDFMSRA-KTRETLQTGNLLSVINVLMQ 1192
Query: 536 LKKCCNHPYLFPAAAEEAPVQ 556
L+K CNHP +F A +P Q
Sbjct: 1193 LRKVCNHPNMFEARPTISPFQ 1213
Score = 259 (96.2 bits), Expect = 1.8e-51, Sum P(5) = 1.8e-51
Identities = 54/94 (57%), Positives = 64/94 (68%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MTKMLD+LE +L+ G+ Y R+DG+ RQ ++RFN F F+LSTRSGG+
Sbjct: 1680 FTQMTKMLDVLEAFLNYHGHIYLRLDGSTRVEQRQILMERFNGDKRI-FCFILSTRSGGV 1738
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ 737
GINL ADTVI YDSDWNP D QA R HRIGQ
Sbjct: 1739 GINLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQ 1772
Score = 192 (72.6 bits), Expect = 1.8e-51, Sum P(5) = 1.8e-51
Identities = 46/108 (42%), Positives = 62/108 (57%)
Query: 240 PFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF-KEGHCK 298
PFL L YQ G++WL + ++ ILADEMGLGKTIQTI L L +G+
Sbjct: 907 PFL--LKHSLREYQHIGLDWLVTMNERKLNGILADEMGLGKTIQTIALLAHLACAKGNW- 963
Query: 299 GPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISW 346
GP L+ P S ++NWE EF+ W P F ++TY G + R + R + W
Sbjct: 964 GPHLIVVPSSVMLNWEMEFKKWCPGFKILTYYGSQKERKLKR---VGW 1008
Score = 178 (67.7 bits), Expect = 3.6e-43, Sum P(5) = 3.6e-43
Identities = 35/70 (50%), Positives = 44/70 (62%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INL ADTVI YDSDWNP D QA R HRIGQ V IYR V+ ++E + + A +K
Sbjct: 1740 INLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLVSERTIEVNILKKANQKR 1799
Query: 802 MLTHLVVRPG 811
ML+ + + G
Sbjct: 1800 MLSDMAIEGG 1809
Score = 39 (18.8 bits), Expect = 1.8e-51, Sum P(5) = 1.8e-51
Identities = 7/33 (21%), Positives = 19/33 (57%)
Query: 914 KKKEMSKQERDRPLPPLLARVGGNIEVLNQLEE 946
++ + Q++ +P PP L + +V+ Q+++
Sbjct: 2338 QQMQQQSQQQQQPAPPPLPQQQQPQQVVQQVQQ 2370
Score = 38 (18.4 bits), Expect = 1.8e-51, Sum P(5) = 1.8e-51
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 47 LLALFLGTGDRYLQTSSPKSPSQNLDFTSFLEVYHPQLLKSYMKK 91
LL+ LG G + +P S +Q F + EVY Q + ++
Sbjct: 460 LLSPALGGG-----SGTPNSAAQEFSFKAKQEVYVMQRISELQRE 499
Score = 37 (18.1 bits), Expect = 1.4e-29, Sum P(4) = 1.4e-29
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 930 LLARVGGNIEVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERS 978
+ A V +L +L+ D+ D + LPA R P R H+ RS
Sbjct: 1253 MTAYVSHKSRLLAPPRKLIEDI--DTAPLPAP--RCPNGKYRFHIRVRS 1297
>RGD|1310969 [details] [associations]
symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0000070 "mitotic sister chromatid
segregation" evidence=ISO] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA;ISO] [GO:0003678 "DNA helicase activity"
evidence=ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006302 "double-strand break repair" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0010571 "positive
regulation of DNA replication involved in S phase" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0030307 "positive
regulation of cell growth" evidence=ISO] [GO:0031011 "Ino80
complex" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043014 "alpha-tubulin binding" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0070914 "UV-damage excision repair" evidence=ISO]
[GO:0071479 "cellular response to ionizing radiation" evidence=ISO]
[GO:2000045 "regulation of G1/S transition of mitotic cell cycle"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 RGD:1310969
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00680000100052
IPI:IPI00569811 Ensembl:ENSRNOT00000031672 UCSC:RGD:1310969
Uniprot:D4A6Q6
Length = 1553
Score = 246 (91.7 bits), Expect = 2.2e-51, Sum P(3) = 2.2e-51
Identities = 50/94 (53%), Positives = 64/94 (68%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
+ MT+M+D+LE+Y+ + Y R+DG+ S R++ + F FVFLLSTR+GGL
Sbjct: 1120 YSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDMVADFQTRN-DIFVFLLSTRAGGL 1178
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ 737
GINL ADTVI YDSDWNP D QA RAHR+GQ
Sbjct: 1179 GINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQ 1212
Score = 228 (85.3 bits), Expect = 2.2e-51, Sum P(3) = 2.2e-51
Identities = 64/205 (31%), Positives = 100/205 (48%)
Query: 346 WEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSK 405
W + +R K + + FHV++TSY+L+ DV ++W +V+DEA LKS+ S
Sbjct: 601 WGNPHDRKKKKT-LYTQDAPFHVVITSYQLVVQDVKYFQRVKWQYMVLDEAQALKSSSSV 659
Query: 406 FFKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFA-DISK---- 460
+K L + +N+LLLTGTP P F+ F F+ DI
Sbjct: 660 RWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAEN 719
Query: 461 -----EEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTR-N 514
E Q+ RLH +L P MLRR+K DV + K E ++ +L+ QK Y+ + + +
Sbjct: 720 KSAIDENQLSRLHMILKPFMLRRIKKDVENELSDKIEILMYCQLTSRQKLLYQALKNKIS 779
Query: 515 FEAL--NPKGGGQQV-SLLNIMMDL 536
E L + G QQ + + +M+L
Sbjct: 780 IEDLLQSSMGSTQQAQNTTSSLMNL 804
Score = 211 (79.3 bits), Expect = 1.2e-47, Sum P(3) = 1.2e-47
Identities = 43/94 (45%), Positives = 57/94 (60%)
Query: 718 SDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 777
+D+ NDI F + R G INL ADTVI YDSDWNP D QA RAHR+GQ +
Sbjct: 1158 ADFQTRNDIFVFLLSTRAGGLG--INLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ 1215
Query: 778 VMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPG 811
V +YR + + ++EER+ Q AK K + +V+ G
Sbjct: 1216 VTVYRLICKGTIEERILQRAKEKSEIQRMVISGG 1249
Score = 210 (79.0 bits), Expect = 2.2e-51, Sum P(3) = 2.2e-51
Identities = 41/85 (48%), Positives = 57/85 (67%)
Query: 248 QLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPL 307
+L YQL+G+NWL + Q I+ ILADEMGLGKT+Q+I L L + + GPFL+ +P
Sbjct: 519 KLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISPA 578
Query: 308 STIINWEREFETWAPDFYVVTYVGD 332
ST+ NW +EF + P F V+ Y G+
Sbjct: 579 STLNNWHQEFTRFVPKFKVLPYWGN 603
Score = 153 (58.9 bits), Expect = 1.5e-43, Sum P(3) = 1.5e-43
Identities = 46/134 (34%), Positives = 67/134 (50%)
Query: 443 EKFNDLTS----FQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVE 498
E+FN+ S AE E Q+ RLH +L P MLRR+K DV + K E ++ +
Sbjct: 703 EEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENELSDKIEILMYCQ 762
Query: 499 LSPMQKKYYKYILTR-NFEAL--NPKGGGQQV-----SLLNIMMDLKKCCNHPYLFPAAA 550
L+ QK Y+ + + + E L + G QQ SL+N++M +K CNHP LF
Sbjct: 763 LTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQNTTSSLMNLVMQFRKVCNHPELFERQE 822
Query: 551 EEAP--VQGGQYEI 562
+P + YEI
Sbjct: 823 TWSPFHISLKPYEI 836
>UNIPROTKB|F1P0A4 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] InterPro:IPR000330
InterPro:IPR020838 Pfam:PF00176 Pfam:PF13892 GO:GO:0005524
GO:GO:0003677 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016817 GeneTree:ENSGT00680000100002 EMBL:AADN02016239
EMBL:AADN02016240 IPI:IPI00819661 Ensembl:ENSGALT00000038610
ArrayExpress:F1P0A4 Uniprot:F1P0A4
Length = 469
Score = 536 (193.7 bits), Expect = 5.9e-51, P = 5.9e-51
Identities = 125/333 (37%), Positives = 184/333 (55%)
Query: 228 TTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITF 287
TT++ ++E+ P ++ G +L YQ+ G+NWL + I+ ILADEMGLGKT+QTI+
Sbjct: 146 TTNVCTRFEESPSYVK-WG-KLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISL 203
Query: 288 LYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRDHDISW 346
L + + GP +V P ST+ NW EF+ W P V +GDKD R +RD +
Sbjct: 204 LGYMKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPTLRAVCLIGDKDQRAAFVRDVLLPG 263
Query: 347 EDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKF 406
E + V +TSYE++ + ++ W LV+DEAHR+K+ +SK
Sbjct: 264 E------------------WDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKL 305
Query: 407 FKFLSGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFAD---ISKEEQ 463
+ + + N+LLLTGTP P+ FN F + F + ++
Sbjct: 306 SEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDQKL 365
Query: 464 VKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGG 523
V+RLH +L P +LRR+KADV K++P K E + V LS MQ+++Y IL ++ + LN G
Sbjct: 366 VERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGK 425
Query: 524 GQQVSLLNIMMDLKKCCNHPYLFPAAAEEAPVQ 556
++ LLNI+M L+KCCNHPYLF A E P Q
Sbjct: 426 LDKMRLLNILMQLRKCCNHPYLFDGA-EPGPPQ 457
>GENEDB_PFALCIPARUM|PF08_0048 [details] [associations]
symbol:PF08_0048 "ATP-dependent helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0016020 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GO:GO:0008026 KO:K01509 EMBL:AL844507
RefSeq:XP_002808863.1 EnsemblProtists:PF08_0048:mRNA GeneID:2655499
KEGG:pfa:PF08_0048 EuPathDB:PlasmoDB:PF3D7_0820000 Uniprot:C0H4W3
Length = 2082
Score = 249 (92.7 bits), Expect = 1.7e-50, Sum P(3) = 1.7e-50
Identities = 60/193 (31%), Positives = 98/193 (50%)
Query: 366 FHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTP 425
FH+ ++SY + D + W +++DEAH +K+ +K + + N LL+TGTP
Sbjct: 762 FHICISSYSTVVKDHLVFKRKRWKYIILDEAHNIKNFNTKRWNIILSLKRDNCLLITGTP 821
Query: 426 XXXXXXXXXXXXXXXTPEKFNDLTSFQAEFAD-----ISK------EEQVKRLHDLLGPH 474
P F F+ F+D I K +E + RLH ++ P+
Sbjct: 822 LQNSLEELWSLLHFLMPNIFTSHLDFKEWFSDPLNLAIEKSKIHHSKELIDRLHTVIRPY 881
Query: 475 MLRRLKADVLKNMPSKSEFIVRVELSPMQKKYY-KYILTRNFEALNPKGGGQQVSLLNIM 533
+LRRLK +V K MP+K E I++ +L+ Q+ Y ++I +N + N G + L+NI+
Sbjct: 882 ILRRLKKNVEKEMPNKYEHIIKCKLTRRQQILYDEFINNKNVQ--NTLNTGNYIGLMNIL 939
Query: 534 MDLKKCCNHPYLF 546
+ L+K CNH LF
Sbjct: 940 IQLRKVCNHCDLF 952
Score = 230 (86.0 bits), Expect = 1.7e-50, Sum P(3) = 1.7e-50
Identities = 47/94 (50%), Positives = 60/94 (63%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F KMLDILE +L+ Y + R+DG+ RQ+ + +FN S F+F+ STRSG +
Sbjct: 1790 FTQFIKMLDILEIFLNHLNYSFIRLDGSTKVEQRQKIVTKFNND-KSIFIFISSTRSGSI 1848
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ 737
GINL A+ VI YD+DWNP D QA R HRIGQ
Sbjct: 1849 GINLTAANVVIFYDTDWNPSIDKQAMDRCHRIGQ 1882
Score = 201 (75.8 bits), Expect = 1.7e-50, Sum P(3) = 1.7e-50
Identities = 48/120 (40%), Positives = 70/120 (58%)
Query: 228 TTDLRKKY-EKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTIT 286
T ++ +K+ K PP + T L YQ G++WL Y + NI+ ILADEMGLGKT+Q I+
Sbjct: 643 TCNMDEKHLTKIPPIIKAT---LRDYQHAGLHWLLYLYKNNINGILADEMGLGKTLQCIS 699
Query: 287 FLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISW 346
L L + GP LV P S +INWE E + + P F +++Y G+++ R R + W
Sbjct: 700 LLSYLAYYFNIWGPHLVIVPTSILINWEIELKRFCPCFKILSYYGNQNERYKKR---VGW 756
Score = 160 (61.4 bits), Expect = 3.3e-43, Sum P(3) = 3.3e-43
Identities = 39/107 (36%), Positives = 55/107 (51%)
Query: 720 WNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVM 779
+N I F + R G INL A+ VI YD+DWNP D QA R HRIGQ V
Sbjct: 1830 FNNDKSIFIFISSTRSGSIG--INLTAANVVIFYDTDWNPSIDKQAMDRCHRIGQTKDVH 1887
Query: 780 IYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQANFTKQELDD 826
++RFV +VEE + + +K L ++ + MG + T ++ D
Sbjct: 1888 VFRFVCEYTVEENIWKKQLQKRKLDNICIN--MGNFNNSNTHSKITD 1932
>UNIPROTKB|C0H4W3 [details] [associations]
symbol:PF08_0048 "Probable ATP-dependent helicase
PF08_0048" species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0016020
"membrane" evidence=NAS] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016020
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0016568
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
GO:GO:0008026 KO:K01509 EMBL:AL844507 RefSeq:XP_002808863.1
EnsemblProtists:PF08_0048:mRNA GeneID:2655499 KEGG:pfa:PF08_0048
EuPathDB:PlasmoDB:PF3D7_0820000 Uniprot:C0H4W3
Length = 2082
Score = 249 (92.7 bits), Expect = 1.7e-50, Sum P(3) = 1.7e-50
Identities = 60/193 (31%), Positives = 98/193 (50%)
Query: 366 FHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTP 425
FH+ ++SY + D + W +++DEAH +K+ +K + + N LL+TGTP
Sbjct: 762 FHICISSYSTVVKDHLVFKRKRWKYIILDEAHNIKNFNTKRWNIILSLKRDNCLLITGTP 821
Query: 426 XXXXXXXXXXXXXXXTPEKFNDLTSFQAEFAD-----ISK------EEQVKRLHDLLGPH 474
P F F+ F+D I K +E + RLH ++ P+
Sbjct: 822 LQNSLEELWSLLHFLMPNIFTSHLDFKEWFSDPLNLAIEKSKIHHSKELIDRLHTVIRPY 881
Query: 475 MLRRLKADVLKNMPSKSEFIVRVELSPMQKKYY-KYILTRNFEALNPKGGGQQVSLLNIM 533
+LRRLK +V K MP+K E I++ +L+ Q+ Y ++I +N + N G + L+NI+
Sbjct: 882 ILRRLKKNVEKEMPNKYEHIIKCKLTRRQQILYDEFINNKNVQ--NTLNTGNYIGLMNIL 939
Query: 534 MDLKKCCNHPYLF 546
+ L+K CNH LF
Sbjct: 940 IQLRKVCNHCDLF 952
Score = 230 (86.0 bits), Expect = 1.7e-50, Sum P(3) = 1.7e-50
Identities = 47/94 (50%), Positives = 60/94 (63%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F KMLDILE +L+ Y + R+DG+ RQ+ + +FN S F+F+ STRSG +
Sbjct: 1790 FTQFIKMLDILEIFLNHLNYSFIRLDGSTKVEQRQKIVTKFNND-KSIFIFISSTRSGSI 1848
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ 737
GINL A+ VI YD+DWNP D QA R HRIGQ
Sbjct: 1849 GINLTAANVVIFYDTDWNPSIDKQAMDRCHRIGQ 1882
Score = 201 (75.8 bits), Expect = 1.7e-50, Sum P(3) = 1.7e-50
Identities = 48/120 (40%), Positives = 70/120 (58%)
Query: 228 TTDLRKKY-EKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTIT 286
T ++ +K+ K PP + T L YQ G++WL Y + NI+ ILADEMGLGKT+Q I+
Sbjct: 643 TCNMDEKHLTKIPPIIKAT---LRDYQHAGLHWLLYLYKNNINGILADEMGLGKTLQCIS 699
Query: 287 FLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISW 346
L L + GP LV P S +INWE E + + P F +++Y G+++ R R + W
Sbjct: 700 LLSYLAYYFNIWGPHLVIVPTSILINWEIELKRFCPCFKILSYYGNQNERYKKR---VGW 756
Score = 160 (61.4 bits), Expect = 3.3e-43, Sum P(3) = 3.3e-43
Identities = 39/107 (36%), Positives = 55/107 (51%)
Query: 720 WNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVM 779
+N I F + R G INL A+ VI YD+DWNP D QA R HRIGQ V
Sbjct: 1830 FNNDKSIFIFISSTRSGSIG--INLTAANVVIFYDTDWNPSIDKQAMDRCHRIGQTKDVH 1887
Query: 780 IYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQANFTKQELDD 826
++RFV +VEE + + +K L ++ + MG + T ++ D
Sbjct: 1888 VFRFVCEYTVEENIWKKQLQKRKLDNICIN--MGNFNNSNTHSKITD 1932
>DICTYBASE|DDB_G0267556 [details] [associations]
symbol:DDB_G0267556 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0267556
GO:GO:0005524 GO:GO:0003677 EMBL:AAFI02000003 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
RefSeq:XP_647125.1 ProteinModelPortal:Q55GQ9
EnsemblProtists:DDB0233433 GeneID:8615929 KEGG:ddi:DDB_G0267556
InParanoid:Q55GQ9 OMA:CANVVIF ProtClustDB:CLSZ2501118
Uniprot:Q55GQ9
Length = 1159
Score = 362 (132.5 bits), Expect = 2.4e-50, Sum P(4) = 2.4e-50
Identities = 95/290 (32%), Positives = 147/290 (50%)
Query: 234 KYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFK 293
K QP ++ + YQL G+NW+ + + I+ ILADEMGLGKT+QTI+ L + +
Sbjct: 530 KLVAQPKIINKV---MRNYQLIGLNWMAVLYKEKINGILADEMGLGKTVQTISLLAHIKE 586
Query: 294 EGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHD-ISWEDTANR 352
+ GP LV P + + NWEREF+TW P +V Y G+ LR+ + + +E R
Sbjct: 587 AYNDNGPHLVVVPATILANWEREFQTWCPSLSIVRYYGN------LREREELRYELKKKR 640
Query: 353 GGKPCRIRSSTVKFHVLLTSYELI--TNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFL 410
GK F+V+LT+Y L+ ND L +++ L++DEA +K++ SK +K +
Sbjct: 641 PGKD---------FNVILTTYNLLFANNDRGFLKRFDYSFLILDEAQNIKNSDSKRYKNI 691
Query: 411 SGYSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKF------NDLTSFQAEFADISKEEQV 464
++LLLTGTP P F N L + E+ + +
Sbjct: 692 FKIGAHHRLLLTGTPLQNNLYELWSLLNFLMPHIFGSVKKDNYLLNQLLEYNGDDCDSAI 751
Query: 465 KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRN 514
R+ +L P +LRRLK+ V K + K E + +L Q + YK I+ R+
Sbjct: 752 TRMKKILSPFILRRLKSTVSKELKPKIEHVEICKLPKFQDETYKNIIERS 801
Score = 241 (89.9 bits), Expect = 2.4e-50, Sum P(4) = 2.4e-50
Identities = 56/111 (50%), Positives = 70/111 (63%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MT++LDILED LD GY + R+DG+ + RQ ID F++ VFLLST SGGL
Sbjct: 1007 FSQMTRVLDILEDVLDIFGYNFTRLDGSTPVNERQSIIDHFSSKETIP-VFLLSTNSGGL 1065
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYI--NLATADTVII 752
GINL A+ VI YD +NP D QA RAHR+GQ+ + I L +TV I
Sbjct: 1066 GINLTCANVVIFYDLSFNPQVDRQAEDRAHRLGQEREVIIYKLLAENTVDI 1116
Score = 144 (55.7 bits), Expect = 1.1e-41, Sum P(5) = 1.1e-41
Identities = 33/88 (37%), Positives = 50/88 (56%)
Query: 742 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKM 801
INL A+ VI YD +NP D QA RAHR+GQ+ +V+IY+ + N+V+ + + A +K
Sbjct: 1067 INLTCANVVIFYDLSFNPQVDRQAEDRAHRLGQEREVIIYKLLAENTVDINIHESANQKK 1126
Query: 802 MLTHLVVRPGMGGKQANFTKQELDDILR 829
L V+ G TK + +IL+
Sbjct: 1127 KLNDNVLEEGTFNNAE--TKLQSKNILK 1152
Score = 65 (27.9 bits), Expect = 2.4e-50, Sum P(4) = 2.4e-50
Identities = 15/28 (53%), Positives = 17/28 (60%)
Query: 518 LNPKGGGQQVSLLNIMMDLKKCCNHPYL 545
L G GQ V L NI+M L+K NHP L
Sbjct: 885 LKSNGSGQFV-LNNILMQLRKAANHPLL 911
Score = 54 (24.1 bits), Expect = 1.1e-41, Sum P(5) = 1.1e-41
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 624 DKATWEDENEDIPGLKESIEFYNMTKMLDILEDYLD-GEGY 663
DK W D DIP LKE + Y+ + + ++ D G+ Y
Sbjct: 933 DK-DWSDYRNDIPSLKELFDTYSDYDVFKTVCEHEDLGDKY 972
Score = 53 (23.7 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 168 DKATWEDENEDIPGLKESIEFYN 190
DK W D DIP LKE + Y+
Sbjct: 933 DK-DWSDYRNDIPSLKELFDTYS 954
Score = 39 (18.8 bits), Expect = 2.4e-50, Sum P(4) = 2.4e-50
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 215 SKPRRYTPPPEKPTT 229
SKP + PP KPTT
Sbjct: 256 SKPTQQ--PPTKPTT 268
>ZFIN|ZDB-GENE-050522-499 [details] [associations]
symbol:smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050522-499 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 SUPFAM:SSF46934 GO:GO:0000729 HOGENOM:HOG000172362
GO:GO:0035861 GeneTree:ENSGT00630000089890 OMA:KEERYMA
HOVERGEN:HBG055804 EMBL:AL807792 IPI:IPI00492619 UniGene:Dr.3950
ProteinModelPortal:B0R061 Ensembl:ENSDART00000091409
ArrayExpress:B0R061 Bgee:B0R061 Uniprot:B0R061
Length = 972
Score = 382 (139.5 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
Identities = 109/317 (34%), Positives = 157/317 (49%)
Query: 237 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 296
KQP L+ + ++L AYQL G+ WL + ILADEMGLGKTIQ I FL L+++G
Sbjct: 437 KQPKVLN-SNLKLQAYQLIGLKWLILLHQHKLSGILADEMGLGKTIQAIAFLAHLYEKG- 494
Query: 297 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKP 356
KGP L++ P ST+ NW RE W P V+ Y G + R LR DI G
Sbjct: 495 IKGPHLITVPSSTLDNWVRELGLWCPSLKVLIYYGSVEDRKYLRQ-DIL------TGLID 547
Query: 357 CRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQ 416
I ST +++ + + +D +L ++ V DE H LK+ S ++ L + +
Sbjct: 548 FNIIVST--YNLTIGN----DHDRSLFRKLKLKYAVFDEGHMLKNMNSLRYRHLMTINAE 601
Query: 417 NKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTS-FQAEFADISKEEQ-------VKRLH 468
++LLLTGTP P F+ TS F+ S EE+ + +
Sbjct: 602 HRLLLTGTPLQNNLLELMSLLNFIMPSMFSSSTSQISKMFSTRSSEEESSFHKDRIAQAR 661
Query: 469 DLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVS 528
++ P +LRR+K++VLK +P K E I +S Q K Y + F+ L G +
Sbjct: 662 LIMKPFILRRVKSEVLKELPPKMEKIEMCPMSDAQHKLYDIL----FKRLKKTPNGDKRE 717
Query: 529 LLNIMMDLKKCCNHPYL 545
L N+MM L+K NHP L
Sbjct: 718 LCNVMMQLRKMANHPLL 734
Score = 220 (82.5 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
Identities = 51/109 (46%), Positives = 69/109 (63%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F T MLDI+E L ++Y R+DG+ + R ID++N FVFLLSTR+GG
Sbjct: 823 FSQFTMMLDIVEILLKHLDHQYVRLDGSTPMAERIGLIDKYNT-NPEIFVFLLSTRAGGQ 881
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV 750
GINLA+A+TVI++D D NP ND QA R HR+GQ + I L + D++
Sbjct: 882 GINLASANTVILHDIDCNPFNDKQAEDRCHRMGQTRTVQVIKLISKDSI 930
Score = 160 (61.4 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 35/94 (37%), Positives = 59/94 (62%)
Query: 710 ADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRA 769
A+ + + D +N + +I F + R G Q INLA+A+TVI++D D NP ND QA R
Sbjct: 854 AERIGLIDK-YNTNPEIFVFLLSTRAGGQG--INLASANTVILHDIDCNPFNDKQAEDRC 910
Query: 770 HRIGQQNKVMIYRFVTRNSVEERVTQVAKRKMML 803
HR+GQ V + + ++++S+E+ + +V + K+ L
Sbjct: 911 HRMGQTRTVQVIKLISKDSIEDCMLRVGQEKLKL 944
>UNIPROTKB|F1NAD2 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000018 "regulation of
DNA recombination" evidence=IEA] [GO:0000729 "DNA double-strand
break processing" evidence=IEA] [GO:0000792 "heterochromatin"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0035861
"site of double-strand break" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0051304 "chromosome
separation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0000018 GeneTree:ENSGT00630000089890
GO:GO:0051304 OMA:KNQRGIQ EMBL:AADN02016061 EMBL:AADN02016062
EMBL:AADN02016063 EMBL:AADN02016064 EMBL:AADN02016065
EMBL:AADN02016066 EMBL:AADN02016067 IPI:IPI00583150
Ensembl:ENSGALT00000016936 Uniprot:F1NAD2
Length = 963
Score = 375 (137.1 bits), Expect = 4.4e-49, Sum P(2) = 4.4e-49
Identities = 110/323 (34%), Positives = 168/323 (52%)
Query: 237 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 296
+QP L+ + ++L YQ G+NWL ++ ILADEMGLGKTIQ I FL +++EG
Sbjct: 422 EQPSVLNQS-LELKPYQKIGLNWLALLHKHGLNGILADEMGLGKTIQAIAFLAHIYQEGD 480
Query: 297 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTY-VGDKDCRIVLRDHDISWEDTANRGGK 355
+GP L+ P ST+ NW RE W P+ V+ Y VG ++ R LR DIS NR
Sbjct: 481 -RGPHLIVVPASTLDNWIREVNLWCPELNVLFYYVGSQEDRKHLRA-DIS-----NR--- 530
Query: 356 PCRIRSSTVKFHVLLTSYELI---TNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSG 412
V F+V++T+Y ++D +L ++ + DE H LK+ S ++ L
Sbjct: 531 -------VVDFNVIVTTYNCAISSSDDRSLFRKVKLNYAIFDEGHMLKNMSSVRYQQLMR 583
Query: 413 YSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTS-FQAEFADISK--EEQV----K 465
+ +++LLLTGTP P F+ TS + F+ +K EEQ +
Sbjct: 584 INAKHRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKAKTAEEQSTYEKE 643
Query: 466 RL-H--DLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKG 522
R+ H ++ P +LRR+K +VLK +P K + I +S Q++ Y +L + + + KG
Sbjct: 644 RIAHAKQIIKPFILRRVKDEVLKQLPPKKDHIELCAMSEKQEQLYCDLLNKLKKTM--KG 701
Query: 523 GGQQVSLLNIMMDLKKCCNHPYL 545
+ + N MM L+K NHP L
Sbjct: 702 NEKNSDMGNAMMQLRKMANHPLL 724
Score = 224 (83.9 bits), Expect = 4.4e-49, Sum P(2) = 4.4e-49
Identities = 52/109 (47%), Positives = 67/109 (61%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F T +LDILE +L ++Y R+DG S R ID FN FVFLLST++GGL
Sbjct: 813 FSQFTMVLDILEVFLKHWQHRYIRLDGKTQISDRIHLIDEFNTD-MDIFVFLLSTKAGGL 871
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV 750
GINL +A+ VI++D D NP+ND QA R HR+GQ K I L + T+
Sbjct: 872 GINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTREVKVIKLISKGTI 920
Score = 151 (58.2 bits), Expect = 2.1e-41, Sum P(2) = 2.1e-41
Identities = 33/108 (30%), Positives = 63/108 (58%)
Query: 710 ADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRA 769
+D + + D ++N DI F + + G INL +A+ VI++D D NP+ND QA R
Sbjct: 844 SDRIHLID-EFNTDMDIFVFLLSTKAGGLG--INLTSANVVILHDIDCNPYNDKQAEDRC 900
Query: 770 HRIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQA 817
HR+GQ +V + + +++ ++EE + ++ ++K+ L + +G + A
Sbjct: 901 HRVGQTREVKVIKLISKGTIEESMLKMNQQKLKLEQDMTAADLGEEGA 948
>FB|FBgn0032157 [details] [associations]
symbol:Etl1 "Etl1 homologue" species:7227 "Drosophila
melanogaster" [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 EMBL:AE014134 GO:GO:0003677
GO:GO:0006281 GO:GO:0016568 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K14439
GeneTree:ENSGT00630000089890 OMA:KEERYMA EMBL:AY060597
RefSeq:NP_001033889.1 RefSeq:NP_001033890.1 RefSeq:NP_609320.2
UniGene:Dm.3953 ProteinModelPortal:Q9VL72 SMR:Q9VL72 IntAct:Q9VL72
STRING:Q9VL72 PRIDE:Q9VL72 EnsemblMetazoa:FBtr0079901 GeneID:34311
KEGG:dme:Dmel_CG5899 UCSC:CG5899-RA FlyBase:FBgn0032157
InParanoid:Q9VL72 PhylomeDB:Q9VL72 GenomeRNAi:34311 NextBio:787873
Bgee:Q9VL72 Uniprot:Q9VL72
Length = 844
Score = 362 (132.5 bits), Expect = 6.1e-49, Sum P(2) = 6.1e-49
Identities = 107/340 (31%), Positives = 169/340 (49%)
Query: 237 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 296
+QP L +G+QL YQ+ G+NWL Q ++ ILADEMGLGKTIQ I FL L + G
Sbjct: 278 EQPKLLS-SGLQLADYQIIGLNWLTVMHKQEMNGILADEMGLGKTIQVIAFLAYLKENGL 336
Query: 297 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKP 356
+ L+ P ST+ NWE E W P+ V Y G +D R +R R K
Sbjct: 337 SQAAHLIVVPSSTLDNWEAEISRWCPELVVEKYHGSQDERRRMR----------GRFAK- 385
Query: 357 CRIRSSTVKFHVLLTSYELITN---DVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGY 413
F VLLT+Y ++ + + + + ++ DEAH LK+ ++ + L
Sbjct: 386 ----DGFTGFDVLLTTYHIVGSTPEERKMFRVCKLDYVIFDEAHMLKNMTTQRYANLITI 441
Query: 414 SIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKF-NDLTSFQAEFA----------DISK-- 460
+ + ++LLTGTP P+ F + ++ FA ++S+
Sbjct: 442 NARMRILLTGTPLQNNLLELISLLCFVMPKFFAKSIEDIKSLFAKKGKSDGDQDEVSQFQ 501
Query: 461 EEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNP 520
E Q++R ++ P +LRRLK DVLKN+P K + +V +S QK YY ++ ++ + N
Sbjct: 502 ETQIQRAKRIMKPFVLRRLKKDVLKNLPKKLSLVEKVPMSSQQKIYYHELV--DYYS-NN 558
Query: 521 KG---GGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAPVQG 557
KG + + + IMM++++ NHP L +A ++G
Sbjct: 559 KGEVCSSSERAGIAIMMEMRRIANHPLLMRHYFTDANLRG 598
Score = 234 (87.4 bits), Expect = 6.1e-49, Sum P(2) = 6.1e-49
Identities = 49/95 (51%), Positives = 65/95 (68%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F T MLDI+E+YL + + R+DG ++RQ+ I FN S FVFLLST++GG+
Sbjct: 674 FSQFTMMLDIVEEYLRIRKFGFCRLDGATAVNVRQDLITDFNGDD-SIFVFLLSTKAGGV 732
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQ 738
GINL ADT +I+D D+NP+ND QA R HR+GQQ
Sbjct: 733 GINLTAADTCVIHDIDFNPYNDKQAEDRCHRMGQQ 767
Score = 171 (65.3 bits), Expect = 2.5e-42, Sum P(2) = 2.5e-42
Identities = 35/86 (40%), Positives = 53/86 (61%)
Query: 718 SDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 777
+D+N + I F + + G INL ADT +I+D D+NP+ND QA R HR+GQQ
Sbjct: 712 TDFNGDDSIFVFLLSTKAGGVG--INLTAADTCVIHDIDFNPYNDKQAEDRCHRMGQQRP 769
Query: 778 VMIYRFVTRNSVEERVTQVAKRKMML 803
V IYR ++ +++EE + A+ K+ L
Sbjct: 770 VTIYRLISESTIEEGILMAAEEKLKL 795
>UNIPROTKB|Q5TG85 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
InterPro:IPR012957 Pfam:PF08074 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0008270 GO:GO:0004386
EMBL:AL031847 InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461
Pfam:PF06465 EMBL:AL035406 UniGene:Hs.522898 HGNC:HGNC:16816
ChiTaRS:CHD5 IPI:IPI00445286 UCSC:uc001alz.2 HOGENOM:HOG000139711
HOVERGEN:HBG058712 SMR:Q5TG85 Ensembl:ENST00000378021
Uniprot:Q5TG85
Length = 808
Score = 232 (86.7 bits), Expect = 6.7e-49, Sum P(4) = 6.7e-49
Identities = 45/54 (83%), Positives = 49/54 (90%)
Query: 779 MIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQANFTKQELDDILRFGT 832
MIYRFVTR SVEER+TQVAKRKMMLTHLVVRPG+G K + TKQELDDIL+FGT
Sbjct: 1 MIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGT 54
Score = 178 (67.7 bits), Expect = 6.7e-49, Sum P(4) = 6.7e-49
Identities = 37/45 (82%), Positives = 42/45 (93%)
Query: 939 EVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRL 983
+VLNQLEELLSDMK+DV+RLP+ L+RIPPVA RL MSERSILSRL
Sbjct: 716 KVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRL 760
Score = 173 (66.0 bits), Expect = 6.7e-49, Sum P(4) = 6.7e-49
Identities = 33/42 (78%), Positives = 36/42 (85%)
Query: 848 IIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQ 889
IIKQE EN DP YW KLLRHHYEQ QED++R LGKGKR+RKQ
Sbjct: 165 IIKQE-ENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQ 205
Score = 111 (44.1 bits), Expect = 6.7e-49, Sum P(4) = 6.7e-49
Identities = 22/34 (64%), Positives = 29/34 (85%)
Query: 908 TGRRSAKKKEMSKQERDRPLPPLLARVGGNIEVL 941
+GRR ++++ K +RD+PLPPLLARVGGNIEVL
Sbjct: 248 SGRRQSRRQ--LKSDRDKPLPPLLARVGGNIEVL 279
>TAIR|locus:2062999 [details] [associations]
symbol:BRM "AT2G46020" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0010199 "organ boundary specification between
lateral organs and the meristem" evidence=IGI] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=NAS;TAS] [GO:0040029
"regulation of gene expression, epigenetic" evidence=RCA;IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00951
GO:GO:0005829 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0004386
EMBL:AC005397 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 EMBL:AC004665
EMBL:AJ703891 IPI:IPI00529654 IPI:IPI00541940 PIR:G84897
RefSeq:NP_182126.2 RefSeq:NP_973695.1 UniGene:At.48598
ProteinModelPortal:Q6EVK6 SMR:Q6EVK6 IntAct:Q6EVK6 STRING:Q6EVK6
PaxDb:Q6EVK6 PRIDE:Q6EVK6 EnsemblPlants:AT2G46020.2 GeneID:819210
KEGG:ath:AT2G46020 TAIR:At2g46020 HOGENOM:HOG000029719
InParanoid:Q6EVK6 KO:K11647 OMA:EMNAPKE PhylomeDB:Q6EVK6
ProtClustDB:CLSN2681222 ArrayExpress:Q6EVK6 Genevestigator:Q6EVK6
GO:GO:0010199 GO:GO:0040029 Uniprot:Q6EVK6
Length = 2193
Score = 252 (93.8 bits), Expect = 2.1e-48, Sum P(5) = 2.1e-48
Identities = 52/94 (55%), Positives = 63/94 (67%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F MTK+LDILE+YL Y RIDG + R+ +I FN P F+FLLS R+ G
Sbjct: 1330 FSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDTDCFIFLLSIRAAGR 1389
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ 737
G+NL TADTV+IYD D NP N+ QA +RAHRIGQ
Sbjct: 1390 GLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQ 1423
Score = 191 (72.3 bits), Expect = 2.1e-48, Sum P(5) = 2.1e-48
Identities = 40/108 (37%), Positives = 58/108 (53%)
Query: 237 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 296
+QP L G L YQL G+ W+ + ++ ILADEMGLGKT+Q + + L +
Sbjct: 971 RQPSMLQ-AGT-LRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKG 1028
Query: 297 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 344
GP L+ P + ++NW+ E TW P + YVG KD R L ++
Sbjct: 1029 NYGPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLFSQEV 1076
Score = 159 (61.0 bits), Expect = 2.1e-48, Sum P(5) = 2.1e-48
Identities = 35/107 (32%), Positives = 54/107 (50%)
Query: 364 VKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTG 423
+KF+VL+T+YE I D + L ++W +++DEA R+K +S + L Y Q +LLLTG
Sbjct: 1079 MKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTG 1138
Query: 424 TPXXXXXXXXXXXXXXXTPEKFNDLTSFQAEFAD-ISKEEQVKRLHD 469
TP P+ F++ +F FA KE + D
Sbjct: 1139 TPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIED 1185
Score = 134 (52.2 bits), Expect = 5.8e-36, Sum P(5) = 5.8e-36
Identities = 44/161 (27%), Positives = 73/161 (45%)
Query: 719 DWN-PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 777
D+N P D F + R + +NL TADTV+IYD D NP N+ QA +RAHRIGQ +
Sbjct: 1369 DFNDPDTDCFIFLLSIRAAGRG--LNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTRE 1426
Query: 778 VMIYRFVTRNSVEERVTQVAKRKMMLT--HLVVRPGMGGKQANFTKQELDDILRFGTXXX 835
V + + +V E+++ K + + + + M GK ++ ++R
Sbjct: 1427 VKV---IYMEAVVEKLSSHQKEDELRSGGSVDLEDDMAGKDRYIGS--IEGLIRNNIQQY 1481
Query: 836 XXXXXXXXXXXXIIKQEAENQDPAYWVKLLRHHYEQHQEDV 876
Q +++ ++ L H E++QE V
Sbjct: 1482 KIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETV 1522
Score = 111 (44.1 bits), Expect = 2.1e-48, Sum P(5) = 2.1e-48
Identities = 32/97 (32%), Positives = 48/97 (49%)
Query: 464 VKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNP--- 520
+ RLH +L P MLRR DV ++P+K ++R +S +Q Y +I ++P
Sbjct: 1197 IHRLHQILEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVDPDDE 1256
Query: 521 -----KGGGQQV----SLLNIMMDLKKCCNHPYL-FP 547
K Q +L N M+L+K CNHP L +P
Sbjct: 1257 KLRAQKNPIYQAKIYRTLNNRCMELRKACNHPLLNYP 1293
Score = 48 (22.0 bits), Expect = 1.3e-15, Sum P(3) = 1.3e-15
Identities = 12/54 (22%), Positives = 31/54 (57%)
Query: 453 AEFADISKEEQVKRLHDLLGPHMLR-RLKADVLKNMPSKSEFIVRVELSPMQKK 505
AEF + + +K+++ LL ++ R R++ D++ + + + ++ LS +Q +
Sbjct: 694 AEFLSKKRTDSLKKINGLLAKNLERKRIRPDLVLRLQIEEK---KLRLSDLQSR 744
Score = 44 (20.5 bits), Expect = 2.1e-48, Sum P(5) = 2.1e-48
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 210 DGASGS-KPRRYTPPPEKPTTDLRKKY 235
DG+ P+ +P P K T RK Y
Sbjct: 626 DGSQSKVPPQANSPQPPKDTASARKYY 652
Score = 38 (18.4 bits), Expect = 3.3e-26, Sum P(5) = 3.3e-26
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 654 LEDYLDGEGYKYERIDGNITGSMRQESID 682
LED + G+ I+G I +++Q ID
Sbjct: 1456 LEDDMAGKDRYIGSIEGLIRNNIQQYKID 1484
>MGI|MGI:95453 [details] [associations]
symbol:Smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1" species:10090 "Mus musculus" [GO:0000018 "regulation
of DNA recombination" evidence=ISS] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000729 "DNA double-strand break
processing" evidence=ISO] [GO:0000792 "heterochromatin"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=ISO] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=ISO] [GO:0043596 "nuclear replication fork" evidence=ISO]
[GO:0051304 "chromosome separation" evidence=ISO] [GO:0070932
"histone H3 deacetylation" evidence=ISO] [GO:0070933 "histone H4
deacetylation" evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 MGI:MGI:95453 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0043596 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 GO:GO:0000792 GO:GO:0070932 GO:GO:0070933
GO:GO:0000729 GO:GO:0000018 HOGENOM:HOG000172362 GO:GO:0035861
KO:K14439 GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ
CTD:56916 HOVERGEN:HBG055804 EMBL:X69942 EMBL:AK122454
EMBL:BC042442 EMBL:AK134442 EMBL:AK147884 IPI:IPI00223926
IPI:IPI00556837 PIR:A56559 RefSeq:NP_001240321.1 RefSeq:NP_031984.1
UniGene:Mm.99113 ProteinModelPortal:Q04692 SMR:Q04692 STRING:Q04692
PhosphoSite:Q04692 PaxDb:Q04692 PRIDE:Q04692
Ensembl:ENSMUST00000031984 GeneID:13990 KEGG:mmu:13990
UCSC:uc009ced.1 UCSC:uc012emw.1 InParanoid:Q04692 OrthoDB:EOG4RV2QW
NextBio:284868 Bgee:Q04692 Genevestigator:Q04692
GermOnline:ENSMUSG00000029920 Uniprot:Q04692
Length = 1021
Score = 368 (134.6 bits), Expect = 3.3e-48, Sum P(2) = 3.3e-48
Identities = 104/323 (32%), Positives = 164/323 (50%)
Query: 235 YEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKE 294
+ ++ P L + + L YQ G+NWL ++ ILADEMGLGKTIQ I FL LF+E
Sbjct: 478 WNREQPSLLNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLFQE 537
Query: 295 GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRD--HDISWEDTANR 352
G+ KGP L+ P STI NW RE W P V+ Y G ++ R +R H+ +ED
Sbjct: 538 GN-KGPHLIVVPASTIDNWLREVNLWCPSLNVLCYYGSQEERKQIRFNIHN-KYEDY--- 592
Query: 353 GGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSG 412
+ +T ++ ++S ++D +L ++ + DE H LK+ S ++ L
Sbjct: 593 -----NVIVTT--YNCAISS----SDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMT 641
Query: 413 YSIQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTS-----FQAEF--AD---ISKEE 462
+ +N+LLLTGTP P F+ TS F ++ AD I ++E
Sbjct: 642 INARNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQSIYEKE 701
Query: 463 QVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKG 522
++ ++ P +LRR+K +VLK +P K + I +S Q++ Y + R +++N
Sbjct: 702 RIAHAKQIIKPFILRRVKEEVLKLLPPKKDRIELCAMSEKQEQLYSGLFNRLKKSINNLE 761
Query: 523 GGQQVSLLNIMMDLKKCCNHPYL 545
+ + N+MM L+K NHP L
Sbjct: 762 --KNTEMCNVMMQLRKMANHPLL 782
Score = 224 (83.9 bits), Expect = 3.3e-48, Sum P(2) = 3.3e-48
Identities = 52/109 (47%), Positives = 66/109 (60%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F T MLDILE L ++Y R+DG S R ID FN FVFLLST++GGL
Sbjct: 871 FSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTD-MDIFVFLLSTKAGGL 929
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKY--INLATADTV 750
GINL +A+ VI++D D NP+ND QA R HR+GQ + I L + T+
Sbjct: 930 GINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTI 978
Score = 149 (57.5 bits), Expect = 2.5e-40, Sum P(2) = 2.5e-40
Identities = 29/85 (34%), Positives = 54/85 (63%)
Query: 719 DWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKV 778
++N DI F + + G INL +A+ VI++D D NP+ND QA R HR+GQ +V
Sbjct: 910 EFNTDMDIFVFLLSTKAGGLG--INLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEV 967
Query: 779 MIYRFVTRNSVEERVTQVAKRKMML 803
++ + +++ ++EE + ++ ++K+ L
Sbjct: 968 LVIKLISQGTIEESMLKINQQKLKL 992
>UNIPROTKB|E1C2A5 [details] [associations]
symbol:E1C2A5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] InterPro:IPR012957
Pfam:PF08074 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0008270 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
GO:GO:0016818 EMBL:AADN02040929 EMBL:AADN02040930 IPI:IPI00588910
Ensembl:ENSGALT00000001082 ArrayExpress:E1C2A5 Uniprot:E1C2A5
Length = 771
Score = 232 (86.7 bits), Expect = 4.2e-48, Sum P(4) = 4.2e-48
Identities = 45/54 (83%), Positives = 49/54 (90%)
Query: 779 MIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQANFTKQELDDILRFGT 832
MIYRFVTR SVEER+TQVAKRKMMLTHLVVRPG+G K + TKQELDDIL+FGT
Sbjct: 1 MIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGT 54
Score = 173 (66.0 bits), Expect = 4.2e-48, Sum P(4) = 4.2e-48
Identities = 33/42 (78%), Positives = 36/42 (85%)
Query: 848 IIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQ 889
IIKQE EN DP YW KLLRHHYEQ QED++R LGKGKR+RKQ
Sbjct: 170 IIKQE-ENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQ 210
Score = 169 (64.5 bits), Expect = 4.2e-48, Sum P(4) = 4.2e-48
Identities = 35/44 (79%), Positives = 40/44 (90%)
Query: 939 EVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSR 982
+VLN LEELLSDMK+DV+RLP+ L+RIPPVA RL MSERSILSR
Sbjct: 715 KVLNHLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSR 758
Score = 111 (44.1 bits), Expect = 4.2e-48, Sum P(4) = 4.2e-48
Identities = 22/34 (64%), Positives = 29/34 (85%)
Query: 908 TGRRSAKKKEMSKQERDRPLPPLLARVGGNIEVL 941
+GRR ++++ K +RD+PLPPLLARVGGNIEVL
Sbjct: 253 SGRRQSRRQ--LKSDRDKPLPPLLARVGGNIEVL 284
Score = 38 (18.4 bits), Expect = 4.2e-27, Sum P(3) = 4.2e-27
Identities = 13/56 (23%), Positives = 20/56 (35%)
Query: 873 QEDVSRTLGKGKRVRKQTXXXXXXXXXXXXXXXXLTGRRSAKKKEMSKQERDRPLP 928
++ V +G VRK+ L G S K EM + + P+P
Sbjct: 360 RQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDMILEGPESKKCSEMVSSDPNTPVP 415
>RGD|1309640 [details] [associations]
symbol:Smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1`" species:10116 "Rattus norvegicus" [GO:0000018
"regulation of DNA recombination" evidence=IEA;ISO] [GO:0000729
"DNA double-strand break processing" evidence=ISO;ISS] [GO:0000792
"heterochromatin" evidence=ISO;ISS] [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0035861 "site of double-strand break"
evidence=ISO;ISS] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=ISO;ISS] [GO:0043596 "nuclear replication fork"
evidence=IEA;ISO] [GO:0051304 "chromosome separation"
evidence=ISO;ISS] [GO:0070932 "histone H3 deacetylation"
evidence=ISO;ISS] [GO:0070933 "histone H4 deacetylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140 PROSITE:PS51194
SMART:SM00490 RGD:1309640 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0000729 GO:GO:0000018 GO:GO:0035861 KO:K14439
GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ CTD:56916
OrthoDB:EOG4RV2QW EMBL:AABR03032021 IPI:IPI00765483
RefSeq:NP_001101334.2 UniGene:Rn.7758 ProteinModelPortal:D3Z9Z9
Ensembl:ENSRNOT00000008585 GeneID:312398 KEGG:rno:312398
UCSC:RGD:1309640 Uniprot:D3Z9Z9
Length = 1024
Score = 366 (133.9 bits), Expect = 5.6e-48, Sum P(2) = 5.6e-48
Identities = 105/321 (32%), Positives = 164/321 (51%)
Query: 237 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 296
+QP L+ + + L YQ G+NWL ++ ILADEMGLGKTIQ I FL LF+EG+
Sbjct: 484 EQPSLLNQS-LSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLFQEGN 542
Query: 297 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRD--HDISWEDTANRGG 354
KGP L+ P STI NW RE W P V+ Y G ++ R +R H+ +ED
Sbjct: 543 -KGPHLIVVPASTIDNWLREVNLWCPTLNVLCYYGSQEERKQIRFNIHN-KYEDY----- 595
Query: 355 KPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYS 414
+ +T ++ ++S ++D +L ++ + DE H LK+ S ++ L +
Sbjct: 596 ---NVIVTT--YNCAISS----SDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTIN 646
Query: 415 IQNKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTS-----FQAEF--AD---ISKEEQV 464
+N+LLLTGTP P F+ TS F ++ AD I ++E++
Sbjct: 647 ARNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQSIYEKERI 706
Query: 465 KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGG 524
++ P +LRR+K +VLK +P K + I +S Q++ Y + R +++N
Sbjct: 707 AHAKQIIKPFILRRVKEEVLKLLPPKKDQIELCAMSEKQEQLYSGLFNRLKKSINNLE-- 764
Query: 525 QQVSLLNIMMDLKKCCNHPYL 545
+ + N+MM L+K NHP L
Sbjct: 765 KNTEMCNVMMQLRKMANHPLL 785
Score = 224 (83.9 bits), Expect = 5.6e-48, Sum P(2) = 5.6e-48
Identities = 52/109 (47%), Positives = 66/109 (60%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F T MLDILE L ++Y R+DG S R ID FN FVFLLST++GGL
Sbjct: 874 FSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTD-MDIFVFLLSTKAGGL 932
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKY--INLATADTV 750
GINL +A+ VI++D D NP+ND QA R HR+GQ + I L + T+
Sbjct: 933 GINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTI 981
Score = 149 (57.5 bits), Expect = 4.2e-40, Sum P(2) = 4.2e-40
Identities = 29/85 (34%), Positives = 54/85 (63%)
Query: 719 DWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKV 778
++N DI F + + G INL +A+ VI++D D NP+ND QA R HR+GQ +V
Sbjct: 913 EFNTDMDIFVFLLSTKAGGLG--INLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEV 970
Query: 779 MIYRFVTRNSVEERVTQVAKRKMML 803
++ + +++ ++EE + ++ ++K+ L
Sbjct: 971 LVIKLISQGTIEESMLKINQQKLKL 995
>UNIPROTKB|E1B7X9 [details] [associations]
symbol:SMARCAD1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A containing
DEAD/H box 1" species:9913 "Bos taurus" [GO:0035861 "site of
double-strand break" evidence=ISS] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=ISS] [GO:0000729 "DNA double-strand
break processing" evidence=ISS] [GO:0070933 "histone H4
deacetylation" evidence=ISS] [GO:0070932 "histone H3 deacetylation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0051304 "chromosome separation"
evidence=ISS] [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000018 "regulation of
DNA recombination" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000792 GO:GO:0070932 GO:GO:0070933 GO:GO:0000729
GO:GO:0000018 GO:GO:0035861 GeneTree:ENSGT00630000089890
GO:GO:0051304 EMBL:DAAA02016925 EMBL:DAAA02016926 IPI:IPI00826348
UniGene:Bt.77636 Ensembl:ENSBTAT00000047936 OMA:KNQRGIQ
Uniprot:E1B7X9
Length = 1028
Score = 367 (134.2 bits), Expect = 5.6e-48, Sum P(2) = 5.6e-48
Identities = 103/319 (32%), Positives = 162/319 (50%)
Query: 237 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 296
+QP L+ + + L YQ G+NWL ++ ILADEMGLGKTIQ I FL L++EG+
Sbjct: 488 EQPSILNQS-LSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGN 546
Query: 297 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKP 356
KGP L+ P STI NW RE W P V+ Y G ++ R +R + S + N
Sbjct: 547 -KGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSRYEEYN----- 600
Query: 357 CRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQ 416
+ +T ++ ++S ++D +L ++ + DE H LK+ S ++ L +
Sbjct: 601 --VIVTT--YNCAISS----SDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINAN 652
Query: 417 NKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTS-----FQAEF--AD---ISKEEQVKR 466
N+LLLTGTP P F+ TS F ++ AD I ++E++
Sbjct: 653 NRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQSIYEKERIAH 712
Query: 467 LHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQ 526
++ P +LRR+K +VLK +P K + I +S Q++ Y + R +++N +
Sbjct: 713 AKQIIKPFILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYMNLFNRLKKSINNME--KN 770
Query: 527 VSLLNIMMDLKKCCNHPYL 545
+ N+MM L+K NHP L
Sbjct: 771 TEMCNVMMQLRKMANHPLL 789
Score = 223 (83.6 bits), Expect = 5.6e-48, Sum P(2) = 5.6e-48
Identities = 49/99 (49%), Positives = 62/99 (62%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F T MLDILE L ++Y R+DG S R ID FN FVFLLST++GGL
Sbjct: 878 FSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTD-MDIFVFLLSTKAGGL 936
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYI 742
GINL +A+ VI++D D NP+ND QA R HR+GQ + +
Sbjct: 937 GINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVL 975
Score = 146 (56.5 bits), Expect = 6.9e-40, Sum P(2) = 6.9e-40
Identities = 29/85 (34%), Positives = 53/85 (62%)
Query: 719 DWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKV 778
++N DI F + + G INL +A+ VI++D D NP+ND QA R HR+GQ +V
Sbjct: 917 EFNTDMDIFVFLLSTKAGGLG--INLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEV 974
Query: 779 MIYRFVTRNSVEERVTQVAKRKMML 803
++ + + + ++EE + ++ ++K+ L
Sbjct: 975 LVIKLIGQGTIEESMLKINQQKLKL 999
Score = 37 (18.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 12/38 (31%), Positives = 15/38 (39%)
Query: 655 EDYLDGEGYKYERIDGNITGSMRQESIDRFNA-PGASQ 691
EDY GE + G I ++ SI P SQ
Sbjct: 374 EDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQ 411
>WB|WBGene00010845 [details] [associations]
symbol:M03C11.8 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0003677 GO:GO:0006281 GO:GO:0016568 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K14439
GeneTree:ENSGT00630000089890 EMBL:Z49128 EMBL:AL021171 PIR:T23046
RefSeq:NP_499301.2 ProteinModelPortal:G5EDG2 SMR:G5EDG2
EnsemblMetazoa:M03C11.8 GeneID:176462 KEGG:cel:CELE_M03C11.8
WormBase:M03C11.8 OMA:KEERYMA NextBio:892680 Uniprot:G5EDG2
Length = 989
Score = 338 (124.0 bits), Expect = 5.8e-48, Sum P(3) = 5.8e-48
Identities = 105/325 (32%), Positives = 157/325 (48%)
Query: 238 QPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHC 297
Q P L + G LH YQL G+ WL + ++++ IL DEMGLGKTIQ + FL S K+
Sbjct: 384 QLPLLKE-GCTLHDYQLIGVKWLIMMYNKDLNAILGDEMGLGKTIQIVAFL-SYLKQIGK 441
Query: 298 KGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPC 357
GP L+ P STI NW EF W P ++TY G +D R LR +D +
Sbjct: 442 TGPHLIVVPSSTIENWIGEFHKWCPSIQLLTYYGSQDERKHLRHRVKKQKDHID------ 495
Query: 358 RIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQN 417
+ +T ++TS ++D + ++ DE H LK+ S+ ++ L +
Sbjct: 496 -VILTTYN---MVTSK---SDDKKFFKNFSLNYVIYDEGHMLKNCDSERYRGLMKVKGKK 548
Query: 418 KLLLTGTPXXXXXXXXXXXXXXXTPEKFN----DLTSFQAEFADIS-----------KEE 462
K+LLTGTP + FN D+T F + +++
Sbjct: 549 KILLTGTPLQNNLIELISLMYFVLSKVFNKYCEDITHLLQHFKQLGPALDTKNKALYQQD 608
Query: 463 QVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEAL--NP 520
+++ +L P++LRRLK VL ++PSKSE I+ VE+ QK+ Y I+ EAL +
Sbjct: 609 RIEEAKAILQPYILRRLKNQVLGSLPSKSEQIIEVEMKKPQKQLYDNIV----EALQQSE 664
Query: 521 KGGGQQVSLLNIMMDLKKCCNHPYL 545
+ G SL M L++ NHP L
Sbjct: 665 ESGDSYGSL----MRLRQAANHPLL 685
Score = 255 (94.8 bits), Expect = 5.8e-48, Sum P(3) = 5.8e-48
Identities = 53/95 (55%), Positives = 66/95 (69%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F T MLDILE YL+ GY Y+R+DG RQE I+ FN FVFLLSTR+GGL
Sbjct: 775 FSQFTSMLDILEVYLNIRGYSYKRLDGQTPVLDRQEMINEFNL-SKDLFVFLLSTRAGGL 833
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQ 738
GINL +A+ +II+D D+NP+ND QA R HR+GQ+
Sbjct: 834 GINLTSANHIIIHDIDFNPYNDKQAEDRCHRMGQE 868
Score = 157 (60.3 bits), Expect = 9.4e-38, Sum P(3) = 9.4e-38
Identities = 38/109 (34%), Positives = 63/109 (57%)
Query: 718 SDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNK 777
+++N D+ F + R G INL +A+ +II+D D+NP+ND QA R HR+GQ+
Sbjct: 813 NEFNLSKDLFVFLLSTRAGGLG--INLTSANHIIIHDIDFNPYNDKQAEDRCHRMGQEKP 870
Query: 778 VMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQANFTKQELDD 826
V + R V++ +VE + +AK+K+ L V G+ G+ +EL +
Sbjct: 871 VHVTRLVSKGTVEVGMLALAKKKLQLEKQVT-DGVKGQLDEDALRELKE 918
Score = 45 (20.9 bits), Expect = 5.8e-48, Sum P(3) = 5.8e-48
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 204 ELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQ 238
E ED+D PR+ P +K R+ Y ++
Sbjct: 95 EEDEDDDDYEEEGPRKRKAPSKKKLVYPRENYRRE 129
Score = 40 (19.1 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 639 KESIEFYNMTKMLDILE 655
KE EF+N K D+L+
Sbjct: 290 KECREFFNKAKKEDLLQ 306
>UNIPROTKB|F1RWW3 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0051304
"chromosome separation" evidence=IEA] [GO:0043596 "nuclear
replication fork" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035861 "site of
double-strand break" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=IEA]
[GO:0000018 "regulation of DNA recombination" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000018
GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ
EMBL:CU951443 Ensembl:ENSSSCT00000010066 Uniprot:F1RWW3
Length = 1029
Score = 365 (133.5 bits), Expect = 7.4e-48, Sum P(2) = 7.4e-48
Identities = 103/319 (32%), Positives = 162/319 (50%)
Query: 237 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 296
+QP L+ + + L YQ G+NWL ++ ILADEMGLGKTIQ I FL L++EG+
Sbjct: 489 EQPSILNQS-LSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGN 547
Query: 297 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKP 356
KGP L+ P STI NW RE W P V+ Y G ++ R +R + S + N
Sbjct: 548 -KGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKYEEYN----- 601
Query: 357 CRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQ 416
+ +T ++ ++S ++D +L ++ + DE H LK+ S ++ L +
Sbjct: 602 --VIVTT--YNCAISS----SDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINAN 653
Query: 417 NKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTS-----FQAEF--AD---ISKEEQVKR 466
N+LLLTGTP P F+ TS F ++ AD I ++E++
Sbjct: 654 NRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAH 713
Query: 467 LHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQ 526
++ P +LRR+K +VLK +P K + I +S Q++ Y + R +++N +
Sbjct: 714 AKQIIKPFILRRVKEEVLKQLPPKKDQIELCAMSEKQEQLYLGLFNRLKKSINNME--KN 771
Query: 527 VSLLNIMMDLKKCCNHPYL 545
+ N+MM L+K NHP L
Sbjct: 772 TEMCNVMMQLRKMANHPLL 790
Score = 224 (83.9 bits), Expect = 7.4e-48, Sum P(2) = 7.4e-48
Identities = 52/109 (47%), Positives = 66/109 (60%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F T MLDILE L ++Y R+DG S R ID FN FVFLLST++GGL
Sbjct: 879 FSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTD-MDIFVFLLSTKAGGL 937
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKY--INLATADTV 750
GINL +A+ VI++D D NP+ND QA R HR+GQ + I L + T+
Sbjct: 938 GINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTI 986
Score = 149 (57.5 bits), Expect = 5.6e-40, Sum P(2) = 5.6e-40
Identities = 29/85 (34%), Positives = 54/85 (63%)
Query: 719 DWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKV 778
++N DI F + + G INL +A+ VI++D D NP+ND QA R HR+GQ +V
Sbjct: 918 EFNTDMDIFVFLLSTKAGGLG--INLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEV 975
Query: 779 MIYRFVTRNSVEERVTQVAKRKMML 803
++ + +++ ++EE + ++ ++K+ L
Sbjct: 976 LVIKLISQGTIEESMLKINQQKLKL 1000
Score = 37 (18.1 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 12/38 (31%), Positives = 15/38 (39%)
Query: 655 EDYLDGEGYKYERIDGNITGSMRQESIDRFNA-PGASQ 691
EDY GE + G I ++ SI P SQ
Sbjct: 375 EDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQ 412
>UNIPROTKB|E2RG62 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0070932 "histone H3 deacetylation" evidence=IEA]
[GO:0051304 "chromosome separation" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035861 "site of
double-strand break" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=IEA]
[GO:0000018 "regulation of DNA recombination" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000018
GeneTree:ENSGT00630000089890 GO:GO:0051304 EMBL:AAEX03016768
EMBL:AAEX03016769 Ensembl:ENSCAFT00000015951 Uniprot:E2RG62
Length = 1026
Score = 364 (133.2 bits), Expect = 9.4e-48, Sum P(2) = 9.4e-48
Identities = 103/319 (32%), Positives = 162/319 (50%)
Query: 237 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 296
+QP L+ + + L YQ G+NWL ++ ILADEMGLGKTIQ I FL L++EG+
Sbjct: 486 EQPSILNQS-LSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGN 544
Query: 297 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKP 356
KGP L+ P STI NW RE W P V+ Y G ++ R +R + S + N
Sbjct: 545 -KGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKYEEYN----- 598
Query: 357 CRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQ 416
+ +T ++ ++S ++D +L ++ + DE H LK+ S ++ L +
Sbjct: 599 --VIVTT--YNCAISS----SDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINAN 650
Query: 417 NKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTS-----FQAEF--AD---ISKEEQVKR 466
N+LLLTGTP P F+ TS F ++ AD I ++E++
Sbjct: 651 NRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAH 710
Query: 467 LHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQ 526
++ P +LRR+K +VLK +P K + I +S Q++ Y + R +++N +
Sbjct: 711 AKQIIKPFILRRVKEEVLKQLPPKKDQIELCAMSEKQEQLYLGLFNRLKKSIN--NIEKS 768
Query: 527 VSLLNIMMDLKKCCNHPYL 545
+ N+MM L+K NHP L
Sbjct: 769 TEMCNVMMQLRKMANHPLL 787
Score = 224 (83.9 bits), Expect = 9.4e-48, Sum P(2) = 9.4e-48
Identities = 52/109 (47%), Positives = 66/109 (60%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F T MLDILE L ++Y R+DG S R ID FN FVFLLST++GGL
Sbjct: 876 FSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTD-MDIFVFLLSTKAGGL 934
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKY--INLATADTV 750
GINL +A+ VI++D D NP+ND QA R HR+GQ + I L + T+
Sbjct: 935 GINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTI 983
Score = 149 (57.5 bits), Expect = 7.1e-40, Sum P(2) = 7.1e-40
Identities = 29/85 (34%), Positives = 54/85 (63%)
Query: 719 DWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKV 778
++N DI F + + G INL +A+ VI++D D NP+ND QA R HR+GQ +V
Sbjct: 915 EFNTDMDIFVFLLSTKAGGLG--INLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEV 972
Query: 779 MIYRFVTRNSVEERVTQVAKRKMML 803
++ + +++ ++EE + ++ ++K+ L
Sbjct: 973 LVIKLISQGTIEESMLKINQQKLKL 997
Score = 37 (18.1 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 12/38 (31%), Positives = 15/38 (39%)
Query: 655 EDYLDGEGYKYERIDGNITGSMRQESIDRFNA-PGASQ 691
EDY GE + G I ++ SI P SQ
Sbjct: 372 EDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQ 409
>UNIPROTKB|J9NX47 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GeneTree:ENSGT00630000089890
EMBL:AAEX03016768 EMBL:AAEX03016769 Ensembl:ENSCAFT00000044961
Uniprot:J9NX47
Length = 1026
Score = 364 (133.2 bits), Expect = 9.4e-48, Sum P(2) = 9.4e-48
Identities = 103/319 (32%), Positives = 162/319 (50%)
Query: 237 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 296
+QP L+ + + L YQ G+NWL ++ ILADEMGLGKTIQ I FL L++EG+
Sbjct: 486 EQPSILNQS-LSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGN 544
Query: 297 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKP 356
KGP L+ P STI NW RE W P V+ Y G ++ R +R + S + N
Sbjct: 545 -KGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKYEEYN----- 598
Query: 357 CRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQ 416
+ +T ++ ++S ++D +L ++ + DE H LK+ S ++ L +
Sbjct: 599 --VIVTT--YNCAISS----SDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINAN 650
Query: 417 NKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTS-----FQAEF--AD---ISKEEQVKR 466
N+LLLTGTP P F+ TS F ++ AD I ++E++
Sbjct: 651 NRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAH 710
Query: 467 LHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQ 526
++ P +LRR+K +VLK +P K + I +S Q++ Y + R +++N +
Sbjct: 711 AKQIIKPFILRRVKEEVLKQLPPKKDQIELCAMSEKQEQLYLGLFNRLKKSIN--NIEKS 768
Query: 527 VSLLNIMMDLKKCCNHPYL 545
+ N+MM L+K NHP L
Sbjct: 769 TEMCNVMMQLRKMANHPLL 787
Score = 224 (83.9 bits), Expect = 9.4e-48, Sum P(2) = 9.4e-48
Identities = 52/109 (47%), Positives = 66/109 (60%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F T MLDILE L ++Y R+DG S R ID FN FVFLLST++GGL
Sbjct: 876 FSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTD-MDIFVFLLSTKAGGL 934
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKY--INLATADTV 750
GINL +A+ VI++D D NP+ND QA R HR+GQ + I L + T+
Sbjct: 935 GINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTI 983
Score = 149 (57.5 bits), Expect = 7.1e-40, Sum P(2) = 7.1e-40
Identities = 29/85 (34%), Positives = 54/85 (63%)
Query: 719 DWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKV 778
++N DI F + + G INL +A+ VI++D D NP+ND QA R HR+GQ +V
Sbjct: 915 EFNTDMDIFVFLLSTKAGGLG--INLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEV 972
Query: 779 MIYRFVTRNSVEERVTQVAKRKMML 803
++ + +++ ++EE + ++ ++K+ L
Sbjct: 973 LVIKLISQGTIEESMLKINQQKLKL 997
Score = 37 (18.1 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 12/38 (31%), Positives = 15/38 (39%)
Query: 655 EDYLDGEGYKYERIDGNITGSMRQESIDRFNA-PGASQ 691
EDY GE + G I ++ SI P SQ
Sbjct: 372 EDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQ 409
>UNIPROTKB|J9PA79 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GeneTree:ENSGT00630000089890
OMA:KNQRGIQ EMBL:AAEX03016768 EMBL:AAEX03016769
Ensembl:ENSCAFT00000043847 Uniprot:J9PA79
Length = 1026
Score = 364 (133.2 bits), Expect = 9.4e-48, Sum P(2) = 9.4e-48
Identities = 103/319 (32%), Positives = 162/319 (50%)
Query: 237 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 296
+QP L+ + + L YQ G+NWL ++ ILADEMGLGKTIQ I FL L++EG+
Sbjct: 486 EQPSILNQS-LSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGN 544
Query: 297 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKP 356
KGP L+ P STI NW RE W P V+ Y G ++ R +R + S + N
Sbjct: 545 -KGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKYEEYN----- 598
Query: 357 CRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQ 416
+ +T ++ ++S ++D +L ++ + DE H LK+ S ++ L +
Sbjct: 599 --VIVTT--YNCAISS----SDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINAN 650
Query: 417 NKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTS-----FQAEF--AD---ISKEEQVKR 466
N+LLLTGTP P F+ TS F ++ AD I ++E++
Sbjct: 651 NRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAH 710
Query: 467 LHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQ 526
++ P +LRR+K +VLK +P K + I +S Q++ Y + R +++N +
Sbjct: 711 AKQIIKPFILRRVKEEVLKQLPPKKDQIELCAMSEKQEQLYLGLFNRLKKSIN--NIEKS 768
Query: 527 VSLLNIMMDLKKCCNHPYL 545
+ N+MM L+K NHP L
Sbjct: 769 TEMCNVMMQLRKMANHPLL 787
Score = 224 (83.9 bits), Expect = 9.4e-48, Sum P(2) = 9.4e-48
Identities = 52/109 (47%), Positives = 66/109 (60%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F T MLDILE L ++Y R+DG S R ID FN FVFLLST++GGL
Sbjct: 876 FSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTD-MDIFVFLLSTKAGGL 934
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKY--INLATADTV 750
GINL +A+ VI++D D NP+ND QA R HR+GQ + I L + T+
Sbjct: 935 GINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTI 983
Score = 149 (57.5 bits), Expect = 7.1e-40, Sum P(2) = 7.1e-40
Identities = 29/85 (34%), Positives = 54/85 (63%)
Query: 719 DWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKV 778
++N DI F + + G INL +A+ VI++D D NP+ND QA R HR+GQ +V
Sbjct: 915 EFNTDMDIFVFLLSTKAGGLG--INLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEV 972
Query: 779 MIYRFVTRNSVEERVTQVAKRKMML 803
++ + +++ ++EE + ++ ++K+ L
Sbjct: 973 LVIKLISQGTIEESMLKINQQKLKL 997
Score = 37 (18.1 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 12/38 (31%), Positives = 15/38 (39%)
Query: 655 EDYLDGEGYKYERIDGNITGSMRQESIDRFNA-PGASQ 691
EDY GE + G I ++ SI P SQ
Sbjct: 372 EDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQ 409
>UNIPROTKB|Q5FWR0 [details] [associations]
symbol:smarcad1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A containing
DEAD/H box 1" species:8364 "Xenopus (Silurana) tropicalis"
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000729 HOGENOM:HOG000172362 GO:GO:0035861 KO:K14439
HOVERGEN:HBG055804 OrthoDB:EOG4RV2QW EMBL:AAMC01061573
EMBL:AAMC01061574 EMBL:AAMC01061575 EMBL:BC089242
RefSeq:NP_001015697.1 UniGene:Str.34312 ProteinModelPortal:Q5FWR0
GeneID:548414 KEGG:xtr:548414 Xenbase:XB-GENE-492700
InParanoid:Q5FWR0 Uniprot:Q5FWR0
Length = 1003
Score = 359 (131.4 bits), Expect = 2.4e-47, Sum P(2) = 2.4e-47
Identities = 100/319 (31%), Positives = 158/319 (49%)
Query: 237 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 296
+QP + + + L YQ G+NWL ++ ILADEMGLGKT+Q I FL L+ G
Sbjct: 463 EQPSIMSEN-LVLKPYQKIGLNWLALLHKHKVNMILADEMGLGKTVQAIAFLAHLYVTGD 521
Query: 297 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKP 356
GP LV P ST+ NW REF W P ++ Y G ++ R LR +DI K
Sbjct: 522 -SGPHLVVVPASTMDNWIREFNQWCPSMNILLYYGSQEERKHLR-YDIL--------NKV 571
Query: 357 CRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQ 416
++ ++S E D +L ++ V DE H LK+ + ++ L + +
Sbjct: 572 VEFNVIVTTYNCAISSAE----DRSLFRRLKLNFAVFDEGHMLKNMSAIRYQHLMTLNAR 627
Query: 417 NKLLLTGTPXXXXXXXXXXXXXXXTPEKFNDLTS-----F--QAEFAD---ISKEEQVKR 466
++LLLTGTP P F+ TS F +A+ D I ++E++
Sbjct: 628 SRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIKRLFSSKAKSTDEQTIFEKERIAH 687
Query: 467 LHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQ 526
++ P +LRR+K++VLK +P K + I ++S Q++ Y +L + ++++ +
Sbjct: 688 AKQIMKPFILRRVKSEVLKQLPPKQDKIKFCQMSKKQEQLYSDLLNKLKKSIDATEKNSE 747
Query: 527 VSLLNIMMDLKKCCNHPYL 545
L N+MM L+K NHP L
Sbjct: 748 --LCNVMMHLRKMANHPLL 764
Score = 225 (84.3 bits), Expect = 2.4e-47, Sum P(2) = 2.4e-47
Identities = 51/109 (46%), Positives = 66/109 (60%)
Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
F T MLDI+E +L ++Y R+DG S R ID FN F+FLLST++GGL
Sbjct: 853 FSQFTMMLDIIEVFLRHHQHRYVRLDGKTQISERIHLIDEFNTD-MDIFIFLLSTKAGGL 911
Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATADTV 750
GINL +A+ VI++D D NP+ND QA R HR+GQ K I L T+
Sbjct: 912 GINLTSANIVILHDIDCNPYNDKQAEDRCHRVGQTKEVKVIKLIGKGTI 960
Score = 145 (56.1 bits), Expect = 6.1e-39, Sum P(2) = 6.1e-39
Identities = 29/85 (34%), Positives = 53/85 (62%)
Query: 719 DWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKV 778
++N DI F + + G INL +A+ VI++D D NP+ND QA R HR+GQ +V
Sbjct: 892 EFNTDMDIFIFLLSTKAGGLG--INLTSANIVILHDIDCNPYNDKQAEDRCHRVGQTKEV 949
Query: 779 MIYRFVTRNSVEERVTQVAKRKMML 803
+ + + + ++EE + +++++K+ L
Sbjct: 950 KVIKLIGKGTIEESMLKISQQKLRL 974
Score = 39 (18.8 bits), Expect = 7.9e-28, Sum P(2) = 7.9e-28
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 942 NQLEELLSDMKSDVSRL 958
N LE+LLSD+K R+
Sbjct: 834 NILEKLLSDIKKKGDRV 850
WARNING: HSPs involving 290 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.136 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1001 895 0.00087 122 3 11 22 0.40 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 540
No. of states in DFA: 627 (67 KB)
Total size of DFA: 456 KB (2213 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 72.15u 0.12s 72.27t Elapsed: 00:00:09
Total cpu time: 72.29u 0.12s 72.41t Elapsed: 00:00:10
Start: Thu Aug 15 14:43:41 2013 End: Thu Aug 15 14:43:51 2013
WARNINGS ISSUED: 2