Your job contains 1 sequence.
>psy10449
MYVCIVSGVYGFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYV
LQGLFHPARKVRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYELDYVL
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10449
(114 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0031266 - symbol:CG2807 species:7227 "Drosophila m... 518 1.8e-48 1
UNIPROTKB|E1C2C3 - symbol:SF3B1 "Uncharacterized protein"... 490 1.7e-45 1
UNIPROTKB|F1SMZ9 - symbol:SF3B1 "Uncharacterized protein"... 489 2.2e-45 1
UNIPROTKB|F1MX61 - symbol:SF3B1 "Uncharacterized protein"... 489 2.2e-45 1
UNIPROTKB|O75533 - symbol:SF3B1 "Splicing factor 3B subun... 489 2.2e-45 1
UNIPROTKB|G3V7T6 - symbol:Sf3b1 "Splicing factor 3b, subu... 489 2.2e-45 1
MGI|MGI:1932339 - symbol:Sf3b1 "splicing factor 3b, subun... 486 4.5e-45 1
ZFIN|ZDB-GENE-040827-3 - symbol:sf3b1 "splicing factor 3b... 470 2.3e-43 1
DICTYBASE|DDB_G0275957 - symbol:sf3b1 "splicing factor 3B... 422 2.0e-38 1
TAIR|locus:2173333 - symbol:AT5G64270 species:3702 "Arabi... 407 1.2e-36 1
WB|WBGene00011605 - symbol:T08A11.2 species:6239 "Caenorh... 407 1.3e-36 1
UNIPROTKB|G4NCP7 - symbol:MGG_00356 "Splicing factor 3B s... 309 3.2e-26 1
ASPGD|ASPL0000047410 - symbol:AN2420 species:162425 "Emer... 289 4.4e-24 1
POMBASE|SPAC27F1.09c - symbol:prp10 "U2 snRNP-associated ... 280 3.9e-23 1
SGD|S000004901 - symbol:HSH155 "U2-snRNP associated splic... 257 8.0e-21 1
CGD|CAL0003514 - symbol:orf19.2675 species:5476 "Candida ... 242 3.8e-19 1
>FB|FBgn0031266 [details] [associations]
symbol:CG2807 species:7227 "Drosophila melanogaster"
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;ISS] [GO:0005686 "U2 snRNP"
evidence=ISS;IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] InterPro:IPR016024 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AE014134 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0005686 KO:K12828 OMA:GVEAQYI
InterPro:IPR015016 Pfam:PF08920 GeneTree:ENSGT00390000018393
RefSeq:NP_608534.2 ProteinModelPortal:Q9VPR5 SMR:Q9VPR5
IntAct:Q9VPR5 MINT:MINT-1730767 STRING:Q9VPR5
EnsemblMetazoa:FBtr0078068 EnsemblMetazoa:FBtr0332340 GeneID:33235
KEGG:dme:Dmel_CG2807 UCSC:CG2807-RA FlyBase:FBgn0031266
InParanoid:Q9VPR5 OrthoDB:EOG4Z8WBG PhylomeDB:Q9VPR5 ChiTaRS:CG2807
GenomeRNAi:33235 NextBio:782588 ArrayExpress:Q9VPR5 Bgee:Q9VPR5
Uniprot:Q9VPR5
Length = 1340
Score = 518 (187.4 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 94/107 (87%), Positives = 100/107 (93%)
Query: 8 GVYGFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHP 67
GVYGFGCEDALTHLLNYVWPNIFETSPHLVQAFMD+V+GLRV+LGP++ILQY LQGLFHP
Sbjct: 1234 GVYGFGCEDALTHLLNYVWPNIFETSPHLVQAFMDSVDGLRVSLGPIKILQYTLQGLFHP 1293
Query: 68 ARKVRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYELDYVL 114
ARKVRDVYWKIYNSLYIGGQDALI+ YPRI ND KN Y RYELDY L
Sbjct: 1294 ARKVRDVYWKIYNSLYIGGQDALIAGYPRITNDPKNQYERYELDYTL 1340
>UNIPROTKB|E1C2C3 [details] [associations]
symbol:SF3B1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0005689
"U12-type spliceosomal complex" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR016024 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0003682 GO:GO:0071013 GO:GO:0005689
CTD:23451 KO:K12828 OMA:GVEAQYI InterPro:IPR015016 Pfam:PF08920
GeneTree:ENSGT00390000018393 EMBL:AADN02019806 IPI:IPI00572822
RefSeq:XP_421912.3 Ensembl:ENSGALT00000013044 GeneID:424056
KEGG:gga:424056 Uniprot:E1C2C3
Length = 1301
Score = 490 (177.5 bits), Expect = 1.7e-45, P = 1.7e-45
Identities = 86/107 (80%), Positives = 97/107 (90%)
Query: 8 GVYGFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHP 67
GVYGFGCED+L HLLNYVWPN+FETSPH++QA M A+EGLRVA+GP R+LQY LQGLFHP
Sbjct: 1195 GVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHP 1254
Query: 68 ARKVRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYELDYVL 114
ARKVRDVYWKIYNS+YIG QDALI+ YPRI ND KN Y+RYELDY+L
Sbjct: 1255 ARKVRDVYWKIYNSIYIGSQDALIAHYPRIYNDEKNTYIRYELDYIL 1301
>UNIPROTKB|F1SMZ9 [details] [associations]
symbol:SF3B1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
InterPro:IPR016024 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009952 GO:GO:0003682 GO:GO:0071013
GO:GO:0005689 OMA:GVEAQYI InterPro:IPR015016 Pfam:PF08920
GeneTree:ENSGT00390000018393 EMBL:CU468160
Ensembl:ENSSSCT00000017503 Uniprot:F1SMZ9
Length = 1303
Score = 489 (177.2 bits), Expect = 2.2e-45, P = 2.2e-45
Identities = 86/107 (80%), Positives = 97/107 (90%)
Query: 8 GVYGFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHP 67
GVYGFGCED+L HLLNYVWPN+FETSPH++QA M A+EGLRVA+GP R+LQY LQGLFHP
Sbjct: 1197 GVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHP 1256
Query: 68 ARKVRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYELDYVL 114
ARKVRDVYWKIYNS+YIG QDALI+ YPRI ND KN Y+RYELDY+L
Sbjct: 1257 ARKVRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYIL 1303
>UNIPROTKB|F1MX61 [details] [associations]
symbol:SF3B1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
InterPro:IPR016024 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009952 GO:GO:0003682 GO:GO:0071013
GO:GO:0005689 CTD:23451 KO:K12828 OMA:GVEAQYI InterPro:IPR015016
Pfam:PF08920 GeneTree:ENSGT00390000018393 EMBL:DAAA02005513
EMBL:DAAA02005514 IPI:IPI00686595 RefSeq:NP_001179923.1
UniGene:Bt.43697 PRIDE:F1MX61 Ensembl:ENSBTAT00000011734
GeneID:510177 KEGG:bta:510177 NextBio:20869314 Uniprot:F1MX61
Length = 1304
Score = 489 (177.2 bits), Expect = 2.2e-45, P = 2.2e-45
Identities = 86/107 (80%), Positives = 97/107 (90%)
Query: 8 GVYGFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHP 67
GVYGFGCED+L HLLNYVWPN+FETSPH++QA M A+EGLRVA+GP R+LQY LQGLFHP
Sbjct: 1198 GVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHP 1257
Query: 68 ARKVRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYELDYVL 114
ARKVRDVYWKIYNS+YIG QDALI+ YPRI ND KN Y+RYELDY+L
Sbjct: 1258 ARKVRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYIL 1304
>UNIPROTKB|O75533 [details] [associations]
symbol:SF3B1 "Splicing factor 3B subunit 1" species:9606
"Homo sapiens" [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=NAS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;NAS;TAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=NAS] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005689 "U12-type
spliceosomal complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380
"RNA splicing" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] Reactome:REACT_71 InterPro:IPR016024 EMBL:AF054284
GO:GO:0005654 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0009952 GO:GO:0016607 Reactome:REACT_1675
GO:GO:0003682 EMBL:AC010746 GO:GO:0000398 GO:GO:0071013
GO:GO:0005689 PDB:2F9D PDB:2F9J PDB:2FHO PDB:3LQV PDBsum:2F9D
PDBsum:2F9J PDBsum:2FHO PDBsum:3LQV EMBL:AF070540 IPI:IPI00026089
RefSeq:NP_036565.2 UniGene:Hs.632554 PDB:2PEH PDBsum:2PEH
ProteinModelPortal:O75533 SMR:O75533 DIP:DIP-29411N IntAct:O75533
MINT:MINT-1185911 STRING:O75533 PhosphoSite:O75533 PaxDb:O75533
PRIDE:O75533 Ensembl:ENST00000335508 GeneID:23451 KEGG:hsa:23451
UCSC:uc002uue.3 CTD:23451 GeneCards:GC02M198256 HGNC:HGNC:10768
MIM:605590 neXtProt:NX_O75533 PharmGKB:PA35686 eggNOG:COG5181
HOGENOM:HOG000166737 HOVERGEN:HBG079173 InParanoid:O75533 KO:K12828
OMA:GVEAQYI OrthoDB:EOG4RJG0Q PhylomeDB:O75533 ChEMBL:CHEMBL1229013
EvolutionaryTrace:O75533 GenomeRNAi:23451 NextBio:45735
PMAP-CutDB:O75533 ArrayExpress:O75533 Bgee:O75533 CleanEx:HS_SF3B1
Genevestigator:O75533 GermOnline:ENSG00000115524 InterPro:IPR015016
Pfam:PF08920 Uniprot:O75533
Length = 1304
Score = 489 (177.2 bits), Expect = 2.2e-45, P = 2.2e-45
Identities = 86/107 (80%), Positives = 97/107 (90%)
Query: 8 GVYGFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHP 67
GVYGFGCED+L HLLNYVWPN+FETSPH++QA M A+EGLRVA+GP R+LQY LQGLFHP
Sbjct: 1198 GVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHP 1257
Query: 68 ARKVRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYELDYVL 114
ARKVRDVYWKIYNS+YIG QDALI+ YPRI ND KN Y+RYELDY+L
Sbjct: 1258 ARKVRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYIL 1304
>UNIPROTKB|G3V7T6 [details] [associations]
symbol:Sf3b1 "Splicing factor 3b, subunit 1, isoform CRA_b"
species:10116 "Rattus norvegicus" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] InterPro:IPR016024 RGD:620148
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:CH473965
CTD:23451 KO:K12828 OMA:GVEAQYI InterPro:IPR015016 Pfam:PF08920
GeneTree:ENSGT00390000018393 RefSeq:NP_445878.1 UniGene:Rn.198843
ProteinModelPortal:G3V7T6 SMR:G3V7T6 PRIDE:G3V7T6
Ensembl:ENSRNOT00000019126 GeneID:84486 KEGG:rno:84486
NextBio:617020 Uniprot:G3V7T6
Length = 1304
Score = 489 (177.2 bits), Expect = 2.2e-45, P = 2.2e-45
Identities = 86/107 (80%), Positives = 97/107 (90%)
Query: 8 GVYGFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHP 67
GVYGFGCED+L HLLNYVWPN+FETSPH++QA M A+EGLRVA+GP R+LQY LQGLFHP
Sbjct: 1198 GVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHP 1257
Query: 68 ARKVRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYELDYVL 114
ARKVRDVYWKIYNS+YIG QDALI+ YPRI ND KN Y+RYELDY+L
Sbjct: 1258 ARKVRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYIL 1304
>MGI|MGI:1932339 [details] [associations]
symbol:Sf3b1 "splicing factor 3b, subunit 1" species:10090
"Mus musculus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005681 "spliceosomal
complex" evidence=ISO] [GO:0005689 "U12-type spliceosomal complex"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI]
[GO:0071013 "catalytic step 2 spliceosome" evidence=ISO]
InterPro:IPR016024 MGI:MGI:1932339 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0009952
GO:GO:0003682 GO:GO:0005681 GO:GO:0000398 eggNOG:COG5181
HOGENOM:HOG000166737 HOVERGEN:HBG079173 OrthoDB:EOG4RJG0Q
InterPro:IPR015016 Pfam:PF08920 EMBL:AB037890 EMBL:AK012632
IPI:IPI00623284 UniGene:Mm.279736 ProteinModelPortal:Q99NB9
SMR:Q99NB9 STRING:Q99NB9 PhosphoSite:Q99NB9 PaxDb:Q99NB9
PRIDE:Q99NB9 UCSC:uc007azx.1 InParanoid:Q99NB9 CleanEx:MM_SF3B1
Genevestigator:Q99NB9 GermOnline:ENSMUSG00000025982 Uniprot:Q99NB9
Length = 1304
Score = 486 (176.1 bits), Expect = 4.5e-45, P = 4.5e-45
Identities = 85/107 (79%), Positives = 97/107 (90%)
Query: 8 GVYGFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHP 67
GVYGFGCED+L HLLNYVWPN+FETSPH++QA M A+EGLRVA+GP R+LQY LQGLFHP
Sbjct: 1198 GVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHP 1257
Query: 68 ARKVRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYELDYVL 114
ARKVRDVYWKIYNS+YIG QDALI+ YPRI ND KN Y+RY+LDY+L
Sbjct: 1258 ARKVRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYDLDYIL 1304
>ZFIN|ZDB-GENE-040827-3 [details] [associations]
symbol:sf3b1 "splicing factor 3b, subunit 1"
species:7955 "Danio rerio" [GO:0030318 "melanocyte differentiation"
evidence=IGI;IMP] [GO:0014032 "neural crest cell development"
evidence=IMP] [GO:0042981 "regulation of apoptotic process"
evidence=IGI] InterPro:IPR016024 ZFIN:ZDB-GENE-040827-3
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042981
GO:GO:0014032 GO:GO:0030318 CTD:23451 KO:K12828 InterPro:IPR015016
Pfam:PF08920 GeneTree:ENSGT00390000018393 EMBL:BX530407
IPI:IPI00489117 RefSeq:XP_684311.1 UniGene:Dr.32149
Ensembl:ENSDART00000129140 GeneID:446117 KEGG:dre:446117
NextBio:20832227 ArrayExpress:F1QGM7 Bgee:F1QGM7 Uniprot:F1QGM7
Length = 1315
Score = 470 (170.5 bits), Expect = 2.3e-43, P = 2.3e-43
Identities = 84/107 (78%), Positives = 95/107 (88%)
Query: 8 GVYGFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHP 67
GVYGFGCED+L HLLNYVWPN+FETSPH++QA M A+EGLRVA+GP R+LQY LQGLFHP
Sbjct: 1209 GVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHP 1268
Query: 68 ARKVRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYELDYVL 114
ARKVRDVYWKIYNS+YIG QDALI+ YP I ND KN Y+RYEL+Y L
Sbjct: 1269 ARKVRDVYWKIYNSIYIGSQDALIAHYPLIFNDEKNSYVRYELEYFL 1315
>DICTYBASE|DDB_G0275957 [details] [associations]
symbol:sf3b1 "splicing factor 3B subunit 1"
species:44689 "Dictyostelium discoideum" [GO:0005686 "U2 snRNP"
evidence=ISS] [GO:0003729 "mRNA binding" evidence=ISS] [GO:0000245
"spliceosomal complex assembly" evidence=ISS] InterPro:IPR016024
dictyBase:DDB_G0275957 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 InterPro:IPR021133 PROSITE:PS50077 GO:GO:0003729
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0000245
GO:GO:0005686 eggNOG:COG5181 KO:K12828 OMA:GVEAQYI
InterPro:IPR015016 Pfam:PF08920 RefSeq:XP_643385.1
ProteinModelPortal:Q86JC5 SMR:Q86JC5 STRING:Q86JC5
EnsemblProtists:DDB0233168 GeneID:8620270 KEGG:ddi:DDB_G0275957
InParanoid:Q86JC5 Uniprot:Q86JC5
Length = 1051
Score = 422 (153.6 bits), Expect = 2.0e-38, P = 2.0e-38
Identities = 74/107 (69%), Positives = 88/107 (82%)
Query: 8 GVYGFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHP 67
GV G GCED+LTHLLNYVWPN+FETSPH++ AF++AVEGLR ALGP ILQY LQGLFHP
Sbjct: 945 GVMGLGCEDSLTHLLNYVWPNVFETSPHVINAFLEAVEGLRFALGPNTILQYTLQGLFHP 1004
Query: 68 ARKVRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYELDYVL 114
+RKVR++YWK+YN LYI QDAL YPR ++ N Y RYELD+V+
Sbjct: 1005 SRKVRNIYWKLYNMLYISSQDALTPCYPRTLDENDNKYQRYELDFVI 1051
>TAIR|locus:2173333 [details] [associations]
symbol:AT5G64270 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006397 "mRNA processing"
evidence=ISS] [GO:0009507 "chloroplast" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] InterPro:IPR016024 EMBL:CP002688
GO:GO:0009507 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
InterPro:IPR021133 PROSITE:PS50077 EMBL:AB008268
HOGENOM:HOG000166737 KO:K12828 OMA:GVEAQYI InterPro:IPR015016
Pfam:PF08920 IPI:IPI00547640 RefSeq:NP_201232.1 UniGene:At.7385
ProteinModelPortal:Q9FMF9 SMR:Q9FMF9 IntAct:Q9FMF9 STRING:Q9FMF9
PRIDE:Q9FMF9 EnsemblPlants:AT5G64270.1 GeneID:836548
KEGG:ath:AT5G64270 TAIR:At5g64270 InParanoid:Q9FMF9
PhylomeDB:Q9FMF9 ProtClustDB:CLSN2686249 Genevestigator:Q9FMF9
Uniprot:Q9FMF9
Length = 1269
Score = 407 (148.3 bits), Expect = 1.2e-36, P = 1.2e-36
Identities = 72/103 (69%), Positives = 86/103 (83%)
Query: 8 GVYGFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHP 67
GV G GCEDAL HLLN++WPNIFETSPH++ A M+A+EG+RVALG IL Y LQGLFHP
Sbjct: 1163 GVAGLGCEDALVHLLNFIWPNIFETSPHVINAVMEAIEGMRVALGAAVILNYCLQGLFHP 1222
Query: 68 ARKVRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYEL 110
ARKVR+VYWKIYNSLYIG QD L++AYP ++++ NVY R EL
Sbjct: 1223 ARKVREVYWKIYNSLYIGAQDTLVAAYPVLEDEQNNVYSRPEL 1265
>WB|WBGene00011605 [details] [associations]
symbol:T08A11.2 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] InterPro:IPR016024 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0002119 GO:GO:0040011
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020 EMBL:Z50874
KO:K12828 OMA:GVEAQYI InterPro:IPR015016 Pfam:PF08920
GeneTree:ENSGT00390000018393 EMBL:Z50875 PIR:T24140
RefSeq:NP_497853.1 ProteinModelPortal:G5EEQ8 SMR:G5EEQ8
EnsemblMetazoa:T08A11.2 GeneID:175549 KEGG:cel:CELE_T08A11.2
CTD:175549 WormBase:T08A11.2 NextBio:888628 Uniprot:G5EEQ8
Length = 1322
Score = 407 (148.3 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 71/107 (66%), Positives = 89/107 (83%)
Query: 8 GVYGFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHP 67
GVYGFGCEDAL HLLNYVWPN+ E SPHL+Q ++ A EG+RV+LGP+++LQY LQ L+HP
Sbjct: 1216 GVYGFGCEDALIHLLNYVWPNMLENSPHLIQRWVFACEGMRVSLGPIKVLQYCLQALWHP 1275
Query: 68 ARKVRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYELDYVL 114
ARKVR+ WK++N+L +G DALI+AYPRI+N N Y+RYELDY L
Sbjct: 1276 ARKVREPVWKVFNNLILGSADALIAAYPRIENTPTNQYVRYELDYNL 1322
>UNIPROTKB|G4NCP7 [details] [associations]
symbol:MGG_00356 "Splicing factor 3B subunit 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR016024 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:CM001235 GO:GO:0043581
KO:K12828 InterPro:IPR015016 Pfam:PF08920 RefSeq:XP_003718725.1
ProteinModelPortal:G4NCP7 EnsemblFungi:MGG_00356T0 GeneID:2674968
KEGG:mgr:MGG_00356 Uniprot:G4NCP7
Length = 1215
Score = 309 (113.8 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 51/96 (53%), Positives = 71/96 (73%)
Query: 5 IVSGVYGFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGL 64
I GV G GCEDA+ HLLN ++PN+FETSPH++ ++A+E +R+A+GP +L YV GL
Sbjct: 1109 IALGVVGLGCEDAMVHLLNLLYPNLFETSPHVIDRIIEAIEAVRMAVGPGLVLNYVWAGL 1168
Query: 65 FHPARKVRDVYWKIYNSLYIGGQDALISAYPRIQND 100
FHPARKVR YW++YN Y+ G DA++ YP ++ D
Sbjct: 1169 FHPARKVRTPYWRLYNDAYVQGADAMVPYYPTLEED 1204
>ASPGD|ASPL0000047410 [details] [associations]
symbol:AN2420 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR016024 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:BN001307 EMBL:AACD01000039 eggNOG:COG5181
HOGENOM:HOG000166737 KO:K12828 InterPro:IPR015016 Pfam:PF08920
OMA:PKEWMRI OrthoDB:EOG4350F5 RefSeq:XP_660024.1
ProteinModelPortal:Q5BAL0 SMR:Q5BAL0 STRING:Q5BAL0
EnsemblFungi:CADANIAT00009127 GeneID:2874860 KEGG:ani:AN2420.2
Uniprot:Q5BAL0
Length = 1224
Score = 289 (106.8 bits), Expect = 4.4e-24, P = 4.4e-24
Identities = 49/96 (51%), Positives = 68/96 (70%)
Query: 5 IVSGVYGFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGL 64
I GV G GCEDA+ HLLN V+PNIFETSPH++ ++A++ +R+A+G ++ YV GL
Sbjct: 1118 IALGVVGLGCEDAMVHLLNLVFPNIFETSPHVIDRVIEAIDAIRMAVGTGTVMNYVWAGL 1177
Query: 65 FHPARKVRDVYWKIYNSLYIGGQDALISAYPRIQND 100
FH ARKVR YW++YN Y+ DA+I YP ++ D
Sbjct: 1178 FHSARKVRTPYWRLYNDAYVQSADAIIPYYPELEED 1213
>POMBASE|SPAC27F1.09c [details] [associations]
symbol:prp10 "U2 snRNP-associated protein Sap155"
species:4896 "Schizosaccharomyces pombe" [GO:0000245 "spliceosomal
complex assembly" evidence=ISO] [GO:0003729 "mRNA binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0005686 "U2 snRNP"
evidence=ISO] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=IMP] InterPro:IPR016024 PomBase:SPAC27F1.09c EMBL:CU329670
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GenomeReviews:CU329670_GR GO:GO:0003729
GO:GO:0005681 GO:GO:0000245 GO:GO:0005686 GO:GO:0045292
HOGENOM:HOG000166737 KO:K12828 InterPro:IPR015016 Pfam:PF08920
EMBL:AB027815 PIR:T38467 RefSeq:NP_594538.2 IntAct:Q10178
STRING:Q10178 GeneID:2541619 KEGG:spo:SPAC27F1.09c OMA:PKEWMRI
OrthoDB:EOG4350F5 NextBio:20802713 Uniprot:Q10178
Length = 1205
Score = 280 (103.6 bits), Expect = 3.9e-23, P = 3.9e-23
Identities = 47/98 (47%), Positives = 66/98 (67%)
Query: 8 GVYGFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHP 67
G G G EDA+ HLLN +WPNI E SPH++ A + ++G+R +G I+ Y++QGLFHP
Sbjct: 1099 GCVGLGVEDAMIHLLNILWPNILEESPHVINAVREGIDGIRNCIGVGPIMAYLVQGLFHP 1158
Query: 68 ARKVRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVY 105
+RKVR+ YW YNS Y+ DA++ YP + +D N Y
Sbjct: 1159 SRKVRNTYWTSYNSAYVQSADAMVPYYPHVDDDQFNNY 1196
>SGD|S000004901 [details] [associations]
symbol:HSH155 "U2-snRNP associated splicing factor"
species:4932 "Saccharomyces cerevisiae" [GO:0003729 "mRNA binding"
evidence=IDA] [GO:0000245 "spliceosomal complex assembly"
evidence=ISS;IPI] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005686 "U2 snRNP"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IPI] [GO:0071004 "U2-type prespliceosome" evidence=IDA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] InterPro:IPR016024
SGD:S000004901 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0003729 EMBL:BK006946 EMBL:Z49704
GO:GO:0000245 GO:GO:0005686 GO:GO:0071004 eggNOG:COG5181
HOGENOM:HOG000166737 KO:K12828 OMA:PKEWMRI OrthoDB:EOG4350F5
PIR:S54595 RefSeq:NP_014015.1 ProteinModelPortal:P49955 SMR:P49955
DIP:DIP-2628N IntAct:P49955 MINT:MINT-426520 STRING:P49955
PaxDb:P49955 PeptideAtlas:P49955 EnsemblFungi:YMR288W GeneID:855332
KEGG:sce:YMR288W CYGD:YMR288w GeneTree:ENSGT00390000018393
NextBio:979058 Genevestigator:P49955 GermOnline:YMR288W
Uniprot:P49955
Length = 971
Score = 257 (95.5 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 48/104 (46%), Positives = 67/104 (64%)
Query: 11 GFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHPARK 70
G G EDA HL+N + PNIFETSPH + ++ +E L ALGP + Y+ GLFHPA+
Sbjct: 870 GTGHEDAFIHLMNLLIPNIFETSPHAIMRILEGLEALSQALGPGLFMNYIWAGLFHPAKN 929
Query: 71 VRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYELDYVL 114
VR +W++YN++Y+ QDA++ YP + D Y+ ELD VL
Sbjct: 930 VRKAFWRVYNNMYVMYQDAMVPFYP-VTPDNNEEYIE-ELDLVL 971
>CGD|CAL0003514 [details] [associations]
symbol:orf19.2675 species:5476 "Candida albicans" [GO:0071004
"U2-type prespliceosome" evidence=IEA] [GO:0005686 "U2 snRNP"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0000245
"spliceosomal complex assembly" evidence=IEA] InterPro:IPR016024
CGD:CAL0003514 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AACQ01000023 EMBL:AACQ01000025 eggNOG:COG5181
RefSeq:XP_720198.1 RefSeq:XP_720428.1 ProteinModelPortal:Q5AFD2
STRING:Q5AFD2 GeneID:3637842 GeneID:3638121 KEGG:cal:CaO19.10190
KEGG:cal:CaO19.2675 Uniprot:Q5AFD2
Length = 1094
Score = 242 (90.2 bits), Expect = 3.8e-19, P = 3.8e-19
Identities = 46/102 (45%), Positives = 64/102 (62%)
Query: 16 DALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHPARKVRDVY 75
D H LN + PNIFETSPH++ +++++ LR+ +G Y+ GLFHPARKVR Y
Sbjct: 993 DVFIHYLNLIMPNIFETSPHVISRILESIDALRLVIGNGVFTNYIWSGLFHPARKVRAPY 1052
Query: 76 WKIYNSLYIGGQDALISAYPRIQN--DMKNV-YLRYELDYVL 114
WKI+N+ Y+ DAL+ YPRI++ D + Y ELD L
Sbjct: 1053 WKIFNNAYVQCSDALVPCYPRIESLPDEDEISYKLEELDLFL 1094
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.328 0.145 0.460 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 114 114 0.00091 102 3 11 22 0.40 30
29 0.44 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 558 (59 KB)
Total size of DFA: 128 KB (2082 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 11.71u 0.09s 11.80t Elapsed: 00:00:02
Total cpu time: 11.71u 0.09s 11.80t Elapsed: 00:00:03
Start: Thu Aug 15 14:44:59 2013 End: Thu Aug 15 14:45:02 2013