BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1045
(113 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9JID9|SH2B2_MOUSE SH2B adapter protein 2 OS=Mus musculus GN=Sh2b2 PE=1 SV=2
Length = 621
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/87 (41%), Positives = 55/87 (63%), Gaps = 6/87 (6%)
Query: 31 VVECRKEGIVNYLVGENT----DGTQKWEKCRLALVKTVGG--YMLEFYSPPKSLKPKKG 84
+V+ ++EG + ++V ++ GT +W+KCRL L + V G + LEF+ PPK+ +PK
Sbjct: 184 LVDIQREGALRFMVADDAASGPGGTAQWQKCRLLLRRAVAGERFRLEFFVPPKASRPKVS 243
Query: 85 VFCFLITEARETSALEMPDHENTFVLK 111
+ I E R T LEMP+ +NTFVLK
Sbjct: 244 IPLSAIIEVRTTMPLEMPEKDNTFVLK 270
>sp|Q9Z200|SH2B2_RAT SH2B adapter protein 2 OS=Rattus norvegicus GN=Sh2b2 PE=1 SV=1
Length = 621
Score = 74.3 bits (181), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/87 (41%), Positives = 55/87 (63%), Gaps = 6/87 (6%)
Query: 31 VVECRKEGIVNYLVGENT----DGTQKWEKCRLALVKTVGG--YMLEFYSPPKSLKPKKG 84
+V+ ++EG + ++V ++ GT +W+KCRL L + V G + LEF+ PPK+ +PK
Sbjct: 184 LVDIQREGALRFMVADDAASGPGGTAQWQKCRLLLRRAVAGERFRLEFFVPPKASRPKVS 243
Query: 85 VFCFLITEARETSALEMPDHENTFVLK 111
+ I E R T LEMP+ +NTFVLK
Sbjct: 244 IPLSAIIEVRTTMPLEMPEKDNTFVLK 270
>sp|O14492|SH2B2_HUMAN SH2B adapter protein 2 OS=Homo sapiens GN=SH2B2 PE=1 SV=2
Length = 632
Score = 70.9 bits (172), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 55/87 (63%), Gaps = 6/87 (6%)
Query: 31 VVECRKEGIVNYLVGEN----TDGTQKWEKCRLALVKTVGG--YMLEFYSPPKSLKPKKG 84
+V+ ++EG + ++V ++ + G+ +W+KCRL L + V + LEF+ PPK+ +PK
Sbjct: 191 LVDIQREGALRFMVADDAAAGSGGSAQWQKCRLLLRRAVAEERFRLEFFVPPKASRPKVS 250
Query: 85 VFCFLITEARETSALEMPDHENTFVLK 111
+ I E R T LEMP+ +NTFVLK
Sbjct: 251 IPLSAIIEVRTTMPLEMPEKDNTFVLK 277
>sp|Q9UQQ2|SH2B3_HUMAN SH2B adapter protein 3 OS=Homo sapiens GN=SH2B3 PE=1 SV=2
Length = 575
Score = 58.9 bits (141), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 33 ECRKEGIVNYLVGE--NTDGTQKWEKCRLALVKTVG----GYMLEFYSPPKSLKPKKGVF 86
E KE ++ Y + + + D +W++ RLAL + G +LE + PPKS +PK
Sbjct: 194 EALKEAVLRYSLADEASMDSGARWQRGRLALRRAPGPDGPDRVLELFDPPKSSRPKLQAA 253
Query: 87 CFLITEARETSALEMPDHENTFVLK 111
C I E R + LEMPD+ TFVLK
Sbjct: 254 CSSIQEVRWCTRLEMPDNLYTFVLK 278
>sp|Q9NRF2|SH2B1_HUMAN SH2B adapter protein 1 OS=Homo sapiens GN=SH2B1 PE=1 SV=3
Length = 756
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/62 (50%), Positives = 43/62 (69%), Gaps = 3/62 (4%)
Query: 53 KWEKCRL---ALVKTVGGYMLEFYSPPKSLKPKKGVFCFLITEARETSALEMPDHENTFV 109
+W+KCRL + + GG LEF+ PPK+ +P+ + C IT+ R T+ALEMPD ENTFV
Sbjct: 286 QWQKCRLLLRSEGEGGGGSRLEFFVPPKASRPRLSIPCSSITDVRTTTALEMPDRENTFV 345
Query: 110 LK 111
+K
Sbjct: 346 VK 347
>sp|Q91ZM2|SH2B1_MOUSE SH2B adapter protein 1 OS=Mus musculus GN=Sh2b1 PE=1 SV=2
Length = 756
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 50 GTQKWEKCRL---ALVKTVGGYMLEFYSPPKSLKPKKGVFCFLITEARETSALEMPDHEN 106
G +W+KCRL + + GG LEF+ PPK+ +P+ + C IT+ R +ALEMPD EN
Sbjct: 283 GQPQWQKCRLLLRSEGEGGGGSRLEFFVPPKASRPRLSIPCSTITDVRTATALEMPDREN 342
Query: 107 TFVLK 111
TFV+K
Sbjct: 343 TFVVK 347
>sp|Q62985|SH2B1_RAT SH2B adapter protein 1 OS=Rattus norvegicus GN=Sh2b1 PE=1 SV=1
Length = 756
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 50 GTQKWEKCRL---ALVKTVGGYMLEFYSPPKSLKPKKGVFCFLITEARETSALEMPDHEN 106
G +W+KCRL + + GG LEF+ PPK+ +P+ + C IT+ R +ALEMPD EN
Sbjct: 283 GQPQWQKCRLLLRSEGEGGGGSRLEFFVPPKASRPRLSIPCSTITDVRTATALEMPDREN 342
Query: 107 TFVLK 111
TFV+K
Sbjct: 343 TFVVK 347
>sp|O09039|SH2B3_MOUSE SH2B adapter protein 3 OS=Mus musculus GN=Sh2b3 PE=2 SV=2
Length = 548
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 33 ECRKEGIVNYLVGENT--DGTQKWEKCRLALVKTVGGY--MLEFYSPPKSLKPKKGVFCF 88
E KE ++ Y + + D +W++ RL L G+ L+ + PPKS KPK C
Sbjct: 168 EALKEVVLRYSLADEAAMDSGARWQRGRLVLRSPGPGHSHFLQLFDPPKSSKPKLQEACS 227
Query: 89 LITEARETSALEMPDHENTFVLK 111
I E R + LEMPD+ TFVLK
Sbjct: 228 SIREVRPCTRLEMPDNLYTFVLK 250
>sp|Q07152|IMDH_DROME Inosine-5'-monophosphate dehydrogenase OS=Drosophila melanogaster
GN=ras PE=1 SV=1
Length = 537
Score = 32.7 bits (73), Expect = 0.76, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 23/70 (32%)
Query: 1 MAIAMALCGGIGRIKN------RAESKHK-----------------TNKLAKIVVECRKE 37
MAIAMALCGGIG I + +A HK TN + ++ RK
Sbjct: 100 MAIAMALCGGIGIIHHNCTPEYQALEVHKVKKYKHGFMRDPSVMSPTNTVGDVLEARRKN 159
Query: 38 GIVNYLVGEN 47
G Y V EN
Sbjct: 160 GFTGYPVTEN 169
>sp|Q7Z412|PEX26_HUMAN Peroxisome assembly protein 26 OS=Homo sapiens GN=PEX26 PE=1 SV=2
Length = 305
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 11/65 (16%)
Query: 37 EGIVNYLVGENTDGTQKWEKCRLALV-----------KTVGGYMLEFYSPPKSLKPKKGV 85
+ + N+ V E GT KC L +V + V ++L++Y P+ L PK
Sbjct: 63 QSLANHAVAEEPAGTSLEVKCSLCVVGIQALAEMDRWQEVLSWVLQYYQVPEKLPPKVLE 122
Query: 86 FCFLI 90
C L+
Sbjct: 123 LCILL 127
>sp|B0UXP9|IMDH2_DANRE Inosine-5'-monophosphate dehydrogenase 2 OS=Danio rerio GN=impdh2
PE=2 SV=1
Length = 514
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 1 MAIAMALCGGIGRIKNRAESKHKTNKLAKI 30
MAIAMAL GGIG I + + + N++ K+
Sbjct: 78 MAIAMALTGGIGFIHHNCTPEFQANEVRKV 107
>sp|P12268|IMDH2_HUMAN Inosine-5'-monophosphate dehydrogenase 2 OS=Homo sapiens GN=IMPDH2
PE=1 SV=2
Length = 514
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 1 MAIAMALCGGIGRIKNRAESKHKTNKLAKI 30
MAIAMAL GGIG I + + + N++ K+
Sbjct: 78 MAIAMALTGGIGFIHHNCTPEFQANEVRKV 107
>sp|Q3SWY3|IMDH2_BOVIN Inosine-5'-monophosphate dehydrogenase 2 OS=Bos taurus GN=IMPDH2
PE=2 SV=1
Length = 514
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 1 MAIAMALCGGIGRIKNRAESKHKTNKLAKI 30
MAIAMAL GGIG I + + + N++ K+
Sbjct: 78 MAIAMALTGGIGFIHHNCTPEFQANEVRKV 107
>sp|P24547|IMDH2_MOUSE Inosine-5'-monophosphate dehydrogenase 2 OS=Mus musculus GN=Impdh2
PE=1 SV=2
Length = 514
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 1 MAIAMALCGGIGRIKNRAESKHKTNKLAKI 30
MAIAMAL GGIG I + + + N++ K+
Sbjct: 78 MAIAMALTGGIGFIHHNCTPEFQANEVRKV 107
>sp|E9PU28|IMDH2_RAT Inosine-5'-monophosphate dehydrogenase 2 OS=Rattus norvegicus
GN=Impdh2 PE=3 SV=1
Length = 514
Score = 30.8 bits (68), Expect = 2.9, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 1 MAIAMALCGGIGRIKNRAESKHKTNKLAKI 30
MAIAMAL GGIG I + + + N++ K+
Sbjct: 78 MAIAMALTGGIGFIHHNCTPEFQANEVRKV 107
>sp|P12269|IMDH2_CRIGR Inosine-5'-monophosphate dehydrogenase 2 OS=Cricetulus griseus
GN=IMPDH2 PE=1 SV=1
Length = 514
Score = 30.8 bits (68), Expect = 2.9, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 1 MAIAMALCGGIGRIKNRAESKHKTNKLAKI 30
MAIAMAL GGIG I + + + N++ K+
Sbjct: 78 MAIAMALTGGIGFIHHNCTPEFQANEVRKV 107
>sp|D3ZLZ7|IMDH1_RAT Inosine-5'-monophosphate dehydrogenase 1 OS=Rattus norvegicus
GN=Impdh1 PE=3 SV=1
Length = 514
Score = 30.4 bits (67), Expect = 3.1, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 1 MAIAMALCGGIGRIKNRAESKHKTNKLAKI 30
MAIAMAL GGIG I + + + N++ K+
Sbjct: 78 MAIAMALMGGIGFIHHNCTPEFQANEVRKV 107
>sp|P50096|IMDH1_MOUSE Inosine-5'-monophosphate dehydrogenase 1 OS=Mus musculus GN=Impdh1
PE=2 SV=2
Length = 514
Score = 30.4 bits (67), Expect = 3.1, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 1 MAIAMALCGGIGRIKNRAESKHKTNKLAKI 30
MAIAMAL GGIG I + + + N++ K+
Sbjct: 78 MAIAMALMGGIGFIHHNCTPEFQANEVRKV 107
>sp|P20839|IMDH1_HUMAN Inosine-5'-monophosphate dehydrogenase 1 OS=Homo sapiens GN=IMPDH1
PE=1 SV=2
Length = 514
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 1 MAIAMALCGGIGRIKNRAESKHKTNKLAKI 30
MAIAMAL GGIG I + + + N++ K+
Sbjct: 78 MAIAMALMGGIGFIHHNCTPEFQANEVRKV 107
>sp|A0JNA3|IMDH1_BOVIN Inosine-5'-monophosphate dehydrogenase 1 OS=Bos taurus GN=IMPDH1
PE=2 SV=2
Length = 514
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 1 MAIAMALCGGIGRIKNRAESKHKTNKLAKI 30
MAIAMAL GGIG I + + + N++ K+
Sbjct: 78 MAIAMALMGGIGFIHHNCTPEFQANEVRKV 107
>sp|Q6GMG5|IMDH1_DANRE Inosine-5'-monophosphate dehydrogenase 1a OS=Danio rerio GN=impdh1a
PE=2 SV=1
Length = 544
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 1 MAIAMALCGGIGRIKNRAESKHKTNKLAKI 30
MAIAMAL GGIG I + + + N++ K+
Sbjct: 78 MAIAMALMGGIGIIHHNCTPEFQANEVRKV 107
>sp|Q5RGV1|IMDH3_DANRE Inosine-5'-monophosphate dehydrogenase 1b OS=Danio rerio GN=impdh1b
PE=2 SV=1
Length = 514
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 1 MAIAMALCGGIGRIKNRAESKHKTNKLAKI 30
MAIAMAL GGIG I + + + N++ K+
Sbjct: 78 MAIAMALMGGIGIIHHNCTPEFQANEVRKV 107
>sp|Q8WZ42|TITIN_HUMAN Titin OS=Homo sapiens GN=TTN PE=1 SV=4
Length = 34350
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 41/107 (38%), Gaps = 14/107 (13%)
Query: 6 ALCGGIGRIKNRAESKHKTNKLAKIVVECRKEGIVNYLVGENTDGTQKWEKCRLALVKTV 65
A+ G+ I A+ + N I+ EC++ Y + QK CR+ ++
Sbjct: 16780 AMKDGVHDIPEDAQLETAENSSVIIIPECKRSHTGKYSITAKNKAGQKTANCRVKVMDVP 16839
Query: 66 GGYMLEFYSPPKSLKPKKGVFCFLITEARETSALEMPDHENTFVLKG 112
G PPK LK IT + +MPD + +KG
Sbjct: 16840 G--------PPKDLK------VSDITRGSCRLSWKMPDDDGGDRIKG 16872
>sp|Q63150|DPYS_RAT Dihydropyrimidinase OS=Rattus norvegicus GN=Dpys PE=1 SV=2
Length = 519
Score = 29.3 bits (64), Expect = 6.9, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
Query: 28 AKIVVECRKEGIVNY----LVGENTDGTQKWEK 56
AK++ + ++EG V Y G TDGTQ W K
Sbjct: 255 AKVIADAKREGKVVYGEPIAAGLGTDGTQYWNK 287
>sp|F7CYY5|IMDH2_XENTR Inosine-5'-monophosphate dehydrogenase 2 OS=Xenopus tropicalis
GN=impdh2 PE=3 SV=1
Length = 515
Score = 29.3 bits (64), Expect = 7.3, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 1 MAIAMALCGGIGRIKNRAESKHKTNKLAKI 30
MAIAMAL GGIG + + + + N++ K+
Sbjct: 78 MAIAMALTGGIGIMHHNCTPEFQANEVRKV 107
>sp|F6S675|IMDH1_XENTR Inosine-5'-monophosphate dehydrogenase 1 OS=Xenopus tropicalis
GN=impdh1 PE=3 SV=1
Length = 512
Score = 29.3 bits (64), Expect = 7.8, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 1 MAIAMALCGGIGRIKNRAESKHKTNKLAK 29
MAIAMAL GGIG I + + + N++ K
Sbjct: 78 MAIAMALMGGIGIIHHNCTPEFQANEVRK 106
>sp|Q9BE65|PEX26_MACFA Peroxisome assembly protein 26 OS=Macaca fascicularis GN=PEX26 PE=2
SV=1
Length = 305
Score = 28.9 bits (63), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 11/65 (16%)
Query: 37 EGIVNYLVGENTDGTQKWEKCRLALV-----------KTVGGYMLEFYSPPKSLKPKKGV 85
+ + N+ + E GT KC L +V + V ++L++Y P+ L PK
Sbjct: 63 QSLANHALPEEPAGTSLEVKCSLCVVGIQALAEMDRWQEVLSWVLQYYQVPEKLPPKVLE 122
Query: 86 FCFLI 90
C L+
Sbjct: 123 LCILL 127
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,322,617
Number of Sequences: 539616
Number of extensions: 1458148
Number of successful extensions: 2945
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2888
Number of HSP's gapped (non-prelim): 58
length of query: 113
length of database: 191,569,459
effective HSP length: 81
effective length of query: 32
effective length of database: 147,860,563
effective search space: 4731538016
effective search space used: 4731538016
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)