Query psy1045
Match_columns 113
No_of_seqs 63 out of 65
Neff 3.0
Searched_HMMs 29240
Date Fri Aug 16 18:29:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1045.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1045hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1v5m_A SH2 and PH domain-conta 100.0 1E-45 3.4E-50 275.4 7.8 94 20-113 3-103 (136)
2 1u5d_A SKAP55, SRC kinase-asso 95.4 0.069 2.4E-06 33.1 6.6 74 33-111 2-76 (108)
3 2yry_A Pleckstrin homology dom 95.1 0.15 5.3E-06 32.6 7.8 71 32-110 20-90 (122)
4 1eaz_A Tandem PH domain contai 95.0 0.047 1.6E-06 35.1 5.2 72 32-111 12-83 (125)
5 2d9y_A Pleckstrin homology dom 94.3 0.25 8.7E-06 31.2 7.2 70 33-110 10-79 (117)
6 1wg7_A Dedicator of cytokinesi 93.9 0.17 5.9E-06 33.9 6.1 76 32-111 16-95 (150)
7 2i5f_A Pleckstrin; PH domain, 93.2 0.54 1.9E-05 29.3 7.2 53 32-90 5-57 (109)
8 1upq_A PEPP1; PH domain, phosp 92.4 1 3.6E-05 28.6 7.9 71 33-111 10-80 (123)
9 2cod_A Centaurin-delta 1; ARF 92.1 0.46 1.6E-05 30.3 5.9 65 33-111 7-71 (115)
10 1v5p_A Pleckstrin homology dom 92.0 0.45 1.5E-05 32.4 6.1 61 50-111 28-92 (126)
11 1x05_A Pleckstrin; PH domain, 91.9 1.6 5.4E-05 28.2 8.4 76 31-112 15-92 (129)
12 2dkp_A Pleckstrin homology dom 91.9 0.78 2.7E-05 29.4 6.8 73 31-111 18-90 (128)
13 1u5f_A SRC-associated adaptor 91.5 1.5 5.1E-05 29.3 8.2 58 30-91 13-70 (148)
14 2d9w_A Docking protein 2; PH d 90.6 1.3 4.4E-05 32.3 7.6 58 34-93 12-78 (127)
15 1x1g_A Pleckstrin 2; PH domain 90.2 2.5 8.4E-05 27.1 8.2 53 31-89 15-68 (129)
16 1fao_A Dual adaptor of phospho 90.2 1.3 4.4E-05 28.5 6.7 68 33-111 17-84 (126)
17 1pls_A Pleckstrin homology dom 90.1 1.8 6.2E-05 27.3 7.2 68 34-111 5-72 (113)
18 2dn6_A KIAA0640 protein; PH do 90.1 0.84 2.9E-05 28.6 5.6 69 33-111 7-75 (115)
19 1v5u_A SBF1, SET binding facto 89.0 1.8 6.1E-05 27.1 6.6 72 34-111 8-83 (117)
20 1v89_A Hypothetical protein KI 88.1 3 0.0001 25.9 7.2 51 33-91 7-57 (118)
21 1fgy_A GRP1; PH domain, signal 86.1 2.6 8.9E-05 26.7 6.0 51 33-91 4-54 (127)
22 1qqg_A IRS-1, insulin receptor 85.7 1.2 4.2E-05 34.1 5.1 71 30-111 6-84 (264)
23 1wjm_A Beta-spectrin III; PH d 85.6 0.59 2E-05 30.3 2.8 74 32-112 6-89 (123)
24 1u5e_A SRC-associated adaptor 85.4 1.8 6.2E-05 31.8 5.7 77 31-111 103-179 (211)
25 3cxb_B Pleckstrin homology dom 84.6 4.2 0.00014 26.4 6.7 69 36-111 2-72 (112)
26 1wgq_A FYVE, rhogef and PH dom 83.6 5.8 0.0002 24.8 6.8 67 34-111 8-74 (109)
27 3aj4_A Pleckstrin homology dom 81.6 2.8 9.4E-05 26.3 4.7 71 34-111 5-82 (112)
28 3tfm_A Myosin X; split PH doma 78.2 5.1 0.00017 29.4 5.8 51 52-111 77-127 (228)
29 2coc_A FYVE, rhogef and PH dom 75.1 6.8 0.00023 26.3 5.4 68 36-110 10-77 (112)
30 1unq_A RAC-alpha serine/threon 73.8 6.9 0.00024 25.0 4.9 71 33-111 7-78 (125)
31 4af0_A Inosine-5'-monophosphat 72.3 0.81 2.8E-05 40.2 0.2 15 1-15 108-122 (556)
32 1dro_A Beta-spectrin; cytoskel 71.4 3.4 0.00012 26.8 3.0 75 33-111 7-90 (122)
33 2y7b_A Actin-binding protein a 70.3 6.6 0.00022 25.2 4.2 71 34-111 5-80 (134)
34 2dhk_A TBC1 domain family memb 68.8 9.1 0.00031 24.6 4.7 69 34-111 8-76 (119)
35 2j59_M RHO-GTPase activating p 68.7 18 0.00063 24.4 6.4 53 33-89 2-62 (168)
36 2p0d_A RHO GTPase-activating p 64.0 28 0.00097 23.0 7.0 74 32-112 10-96 (129)
37 3pp2_A RHO GTPase-activating p 58.4 21 0.00072 23.4 5.1 45 32-80 6-53 (124)
38 1mai_A Phospholipase C delta-1 56.9 14 0.00046 25.1 4.0 44 52-97 25-70 (131)
39 3tca_A Amyloid beta A4 precurs 56.5 17 0.00059 26.3 4.7 68 36-111 170-242 (291)
40 3lju_X ARF-GAP with dual PH do 56.2 30 0.001 27.7 6.5 55 32-93 267-321 (386)
41 3a8p_A T-lymphoma invasion and 49.2 40 0.0014 25.5 5.9 73 31-112 8-96 (263)
42 2r09_A Cytohesin-3; autoinhibi 48.7 51 0.0017 25.7 6.6 51 33-91 212-262 (347)
43 1v88_A Oxysterol binding prote 46.8 63 0.0022 21.7 6.7 50 33-91 7-56 (130)
44 1x1f_A Signal-transducing adap 45.2 75 0.0026 22.1 7.6 55 31-93 15-69 (149)
45 2d9v_A Pleckstrin homology dom 43.7 65 0.0022 20.9 7.6 73 33-112 7-86 (130)
46 2r5v_A PCZA361.1; dioxygenase, 42.1 14 0.00048 27.9 2.3 32 58-91 292-323 (357)
47 3ey7_A Biphenyl-2,3-DIOL 1,2-d 41.9 22 0.00075 21.5 2.8 22 57-78 112-133 (133)
48 2da0_A 130-kDa phosphatidylino 38.7 72 0.0025 20.0 6.1 65 33-111 9-73 (114)
49 1p8b_A PEA albumin 1, subunit 36.5 12 0.00041 22.4 0.9 15 86-105 2-16 (37)
50 3ml4_A Protein DOK-7; tyrosine 36.0 23 0.00078 27.8 2.7 59 34-98 9-74 (224)
51 1btk_A Bruton'S tyrosine kinas 34.2 33 0.0011 24.0 3.1 60 33-96 2-66 (169)
52 1f9z_A Glyoxalase I; beta-alph 32.9 33 0.0011 20.8 2.6 25 54-78 105-129 (135)
53 1btn_A Beta-spectrin; signal t 30.0 92 0.0031 18.6 4.5 24 50-77 19-42 (106)
54 2rov_A RHO-associated protein 29.9 1.2E+02 0.004 20.1 5.2 44 53-100 19-65 (117)
55 3g12_A Putative lactoylglutath 29.8 35 0.0012 21.7 2.4 20 60-79 105-124 (128)
56 1ju8_A Leginsulin, albumin 1; 29.6 22 0.00077 21.2 1.3 16 86-106 2-17 (37)
57 3rcp_A Pleckstrin homology dom 27.6 1E+02 0.0036 18.5 7.1 51 51-111 12-64 (103)
58 1jc4_A Methylmalonyl-COA epime 27.5 26 0.0009 21.7 1.5 21 58-78 126-148 (148)
59 2r6u_A Uncharacterized protein 26.3 40 0.0014 22.0 2.3 22 58-79 127-148 (148)
60 3ffs_A Inosine-5-monophosphate 26.2 14 0.00048 30.4 0.0 15 1-15 58-72 (400)
61 3r6a_A Uncharacterized protein 25.7 41 0.0014 22.1 2.3 30 58-89 101-130 (144)
62 3lju_X ARF-GAP with dual PH do 25.7 78 0.0027 25.2 4.3 69 34-111 146-214 (386)
63 3huh_A Virulence protein STM31 25.0 53 0.0018 20.8 2.6 25 57-81 125-149 (152)
64 4a6h_A Phosphatidylinositol 4, 24.4 1.3E+02 0.0044 20.0 4.6 48 34-88 6-55 (120)
65 3a8n_A TIAM-1, T-lymphoma inva 24.1 1.1E+02 0.0037 24.0 4.7 44 31-78 8-59 (279)
66 3sk2_A EHPR; antibiotic resist 22.4 60 0.002 20.2 2.5 18 58-75 114-131 (132)
67 2cof_A Protein KIAA1914; PH do 21.8 80 0.0027 19.5 3.0 64 34-111 8-72 (107)
68 2p7o_A Glyoxalase family prote 20.9 96 0.0033 18.8 3.2 24 57-80 104-127 (133)
69 3rhe_A NAD-dependent benzaldeh 20.7 55 0.0019 21.4 2.1 26 58-83 106-131 (148)
No 1
>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=100.00 E-value=1e-45 Score=275.42 Aligned_cols=94 Identities=39% Similarity=0.710 Sum_probs=86.7
Q ss_pred hcccccc-hhhhhheeeEeeeeeeeccCCC----CCcccccceeeeEEEe-cCC-eeeEEecCCCCCCCcccccccceee
Q psy1045 20 SKHKTNK-LAKIVVECRKEGIVNYLVGENT----DGTQKWEKCRLALVKT-VGG-YMLEFYSPPKSLKPKKGVFCFLITE 92 (113)
Q Consensus 20 ~~~s~~~-~aki~~e~~rEG~l~yl~~~~~----~~~~~WqkcRL~Lrk~-~~g-~~LEfy~PPKsskPK~~i~Cs~I~E 92 (113)
.+.|+++ .+++++|++|||+|||+.+++. +++++||||||+|+++ .+| |+||||+||||||||++|+||+|+|
T Consensus 3 ~~~~~~~~~~~~~~e~~kEG~l~~~~~~~~~~~~~~~~~W~k~RLvL~k~g~G~~y~LEfy~PPkssKpK~~i~cs~I~E 82 (136)
T 1v5m_A 3 SGSSGNLAAKVELVDIQREGALRFMVADDAASGPGGTAQWQKCRLLLRRAVAGERFRLEFFVPPKASRPKVSIPLSAIIE 82 (136)
T ss_dssp CCCCCCCCCCCCSCSCCEEEEEEEEECSCCCSSSCCSCCCEEEEEEEEECSSSCCEEEEEESSTTSSSCSSCEETTTCCB
T ss_pred CcCCcccccccccceeeeeeeeeeecccccccccCcccchhheeeEEEEccCCCceEEEEecCCcccCCccccchhhhhh
Confidence 3567888 7789999999999999988665 4889999999999998 566 9999999999999999999999999
Q ss_pred hhccCCccCCCCCCeeEEeeC
Q psy1045 93 ARETSALEMPDHENTFVLKGR 113 (113)
Q Consensus 93 VR~tt~LEMPD~~nTFVLKv~ 113 (113)
||+|||||||||+|||||||+
T Consensus 83 VR~tt~LEmPD~~nTFVlK~~ 103 (136)
T 1v5m_A 83 VRTTMPLEMPEKDNTFVLKVE 103 (136)
T ss_dssp CCCCCCSSSCCCTTEECCBCT
T ss_pred hhhccccccCCccceEEEEec
Confidence 999999999999999999984
No 2
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=95.38 E-value=0.069 Score=33.08 Aligned_cols=74 Identities=18% Similarity=0.208 Sum_probs=48.2
Q ss_pred eeeEeeeeeeeccCCCCCcccccceeeeEEEecCCeeeEEecCCCCCCCcccccccceeehhccCC-ccCCCCCCeeEEe
Q psy1045 33 ECRKEGIVNYLVGENTDGTQKWEKCRLALVKTVGGYMLEFYSPPKSLKPKKGVFCFLITEARETSA-LEMPDHENTFVLK 111 (113)
Q Consensus 33 e~~rEG~l~yl~~~~~~~~~~WqkcRL~Lrk~~~g~~LEfy~PPKsskPK~~i~Cs~I~EVR~tt~-LEMPD~~nTFVLK 111 (113)
++.+||.|.-...........|++.-.+|. +..|.+|..++..+|+-.|+...+. |..... .+.+.+.|.|.|.
T Consensus 2 ~v~~~G~L~K~~~~~~~~~~~Wk~R~fvL~----~~~L~yy~~~~~~~~~g~i~L~~~~-v~~~~~~~~~~~~~~~F~i~ 76 (108)
T 1u5d_A 2 SVIKQGYLEKKSKDHSFFGSEWQKRWCVVS----RGLFYYYANEKSKQPKGTFLIKGYS-VRMAPHLRRDSKKESCFELT 76 (108)
T ss_dssp CEEEEEEEEEEEECSSSSCEEEEEEEEEEE----TTEEEEESSTTCSSCSEEEECTTCE-EEECGGGCSSGGGGGEEEEE
T ss_pred CccEEEEEEEcCCCCCccccCceeeEEEEe----CCEEEEecCCCCCCCCEEEEecceE-EEeCCccccccCCcceEEEE
Confidence 467899887665432112378998777775 4578999999999999888887776 222211 1233345677664
No 3
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.13 E-value=0.15 Score=32.57 Aligned_cols=71 Identities=17% Similarity=0.216 Sum_probs=47.7
Q ss_pred heeeEeeeeeeeccCCCCCcccccceeeeEEEecCCeeeEEecCCCCCCCcccccccceeehhccCCccCCCCCCeeEE
Q psy1045 32 VECRKEGIVNYLVGENTDGTQKWEKCRLALVKTVGGYMLEFYSPPKSLKPKKGVFCFLITEARETSALEMPDHENTFVL 110 (113)
Q Consensus 32 ~e~~rEG~l~yl~~~~~~~~~~WqkcRL~Lrk~~~g~~LEfy~PPKsskPK~~i~Cs~I~EVR~tt~LEMPD~~nTFVL 110 (113)
..+.+||.|.--... ....|++.-.+|. +..|.+|..++..+|+-.|+...+. |....+-+-..+.|.|.|
T Consensus 20 ~~~~~~G~L~K~~~~---~~~~Wk~R~fvL~----~~~L~yy~~~~~~~~~g~i~L~~~~-v~~~~~~~~~~~~~~F~i 90 (122)
T 2yry_A 20 APVTKAGWLFKQASS---GVKQWNKRWFVLV----DRCLFYYKDEKEESILGSIPLLSFR-VAAVQPSDNISRKHTFKA 90 (122)
T ss_dssp CCEEEEEEEEEECCS---SSCCEEEEEEEEE----TTEEEEESSTTCCSCCEEEESTTCC-CEECCTTCSCSSSSEEEE
T ss_pred CCccEEEEEEEECCC---CCCCcEEEEEEEe----CCEEEEECCCCCCCcccEEEcCCCE-EEEcCccccCCcccEEEE
Confidence 347799999765432 3468998888885 4688999999999999888776654 333322233334566765
No 4
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=95.03 E-value=0.047 Score=35.06 Aligned_cols=72 Identities=11% Similarity=0.159 Sum_probs=53.7
Q ss_pred heeeEeeeeeeeccCCCCCcccccceeeeEEEecCCeeeEEecCCCCCCCcccccccceeehhccCCccCCCCCCeeEEe
Q psy1045 32 VECRKEGIVNYLVGENTDGTQKWEKCRLALVKTVGGYMLEFYSPPKSLKPKKGVFCFLITEARETSALEMPDHENTFVLK 111 (113)
Q Consensus 32 ~e~~rEG~l~yl~~~~~~~~~~WqkcRL~Lrk~~~g~~LEfy~PPKsskPK~~i~Cs~I~EVR~tt~LEMPD~~nTFVLK 111 (113)
..+.+||.|.--.. ....|++.-.+|. +-.|.+|..++..+|+-.|+...+..|..+...+.+++.|.|.|.
T Consensus 12 ~~~~~~G~L~K~g~----~~~~Wk~R~fvL~----~~~L~yy~~~~~~~~~g~i~l~~~~~v~~~~~~~~~~~~~~F~i~ 83 (125)
T 1eaz_A 12 SAVIKAGYCVKQGA----VMKNWKRRYFQLD----ENTIGYFKSELEKEPLRVIPLKEVHKVQECKQSDIMMRDNLFEIV 83 (125)
T ss_dssp CCCSEEEEEEEECT----TTCCEEEEEEEEC----SSEEEEESSTTCSSCSEEEEGGGCCEEEECTTHHHHTCSSEEEEE
T ss_pred CCccEEEEEEEeCC----CCCCcceEEEEEe----CCEEEEEcCCCCCcceeEEEcccceEEeeccccccCCcCCEEEEE
Confidence 44668998875432 3457988777774 357899999999999999999988888776555556667888775
No 5
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.29 E-value=0.25 Score=31.18 Aligned_cols=70 Identities=17% Similarity=0.219 Sum_probs=46.5
Q ss_pred eeeEeeeeeeeccCCCCCcccccceeeeEEEecCCeeeEEecCCCCCCCcccccccceeehhccCCccCCCCCCeeEE
Q psy1045 33 ECRKEGIVNYLVGENTDGTQKWEKCRLALVKTVGGYMLEFYSPPKSLKPKKGVFCFLITEARETSALEMPDHENTFVL 110 (113)
Q Consensus 33 e~~rEG~l~yl~~~~~~~~~~WqkcRL~Lrk~~~g~~LEfy~PPKsskPK~~i~Cs~I~EVR~tt~LEMPD~~nTFVL 110 (113)
.+.+||.|.-.... ....|++.-.+|. +..|.+|..++..+|+-.|+...+. |....+-+-..+.|.|.|
T Consensus 10 ~~~~~G~L~K~~~~---~~~~Wk~R~fvL~----~~~L~yy~~~~~~~~~g~i~L~~~~-v~~~~~~~~~~~~~~F~i 79 (117)
T 2d9y_A 10 PVTKAGWLFKQASS---GVKQWNKRWFVLV----DRCLFYYKDEKEESILGSIPLLSFR-VAAVQPSDNISRKHTFKA 79 (117)
T ss_dssp CCCEEEEEEEECTT---SSSCEEEEEEEEE----TTEEEEESSTTCCSCCEEEECSSCE-EEECCTTTTCCCSSEEEE
T ss_pred CeeEEEEEEEeCCC---CCCCceEEEEEEC----CCEEEEECCCCCCCcCCEEEeCCeE-EEEcCccccCCCccEEEE
Confidence 46689998765422 3468988777775 4678999999999999888877654 222222222344566765
No 6
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=93.90 E-value=0.17 Score=33.91 Aligned_cols=76 Identities=21% Similarity=0.227 Sum_probs=50.3
Q ss_pred heeeEeeeeeeeccCCC--CCcccccceeeeEEEecCC-eeeEEecCCC-CCCCcccccccceeehhccCCccCCCCCCe
Q psy1045 32 VECRKEGIVNYLVGENT--DGTQKWEKCRLALVKTVGG-YMLEFYSPPK-SLKPKKGVFCFLITEARETSALEMPDHENT 107 (113)
Q Consensus 32 ~e~~rEG~l~yl~~~~~--~~~~~WqkcRL~Lrk~~~g-~~LEfy~PPK-sskPK~~i~Cs~I~EVR~tt~LEMPD~~nT 107 (113)
..+.+||.|.-...... .....|++.-.+|+...+| +.|.+|.-++ ..+|+-.|+...+..+.... ..+.|.
T Consensus 16 ~~~~~~G~L~K~~~~~~~~~~~k~Wk~RwfvL~~~~~g~~~L~yy~~~~~~~~~~g~I~L~~~~~~~~~~----~~~~~~ 91 (150)
T 1wg7_A 16 GGITKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKISKEPKGSIFLDSCMGVVQNN----KVRRFA 91 (150)
T ss_dssp CCCCCEEEEEECCCCSSHHHHHSSCEEEEEEEEECSSSCEEEEEESSSCCSSCCSEEECTTTCCEECCCC----SSCTTE
T ss_pred CCeeEEEEEEEecCCccccccccCeeEEEEEEecCCCCceEEEEECCCCCCCCcCcEEecccCEEEecCC----CCCceE
Confidence 44668998876543211 1235899888888876544 7899998887 78899888876665554211 234667
Q ss_pred eEEe
Q psy1045 108 FVLK 111 (113)
Q Consensus 108 FVLK 111 (113)
|.|.
T Consensus 92 F~i~ 95 (150)
T 1wg7_A 92 FELK 95 (150)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7664
No 7
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=93.18 E-value=0.54 Score=29.25 Aligned_cols=53 Identities=15% Similarity=0.184 Sum_probs=38.5
Q ss_pred heeeEeeeeeeeccCCCCCcccccceeeeEEEecCCeeeEEecCCCCCCCcccccccce
Q psy1045 32 VECRKEGIVNYLVGENTDGTQKWEKCRLALVKTVGGYMLEFYSPPKSLKPKKGVFCFLI 90 (113)
Q Consensus 32 ~e~~rEG~l~yl~~~~~~~~~~WqkcRL~Lrk~~~g~~LEfy~PPKsskPK~~i~Cs~I 90 (113)
.++.+||.|.--.. ....|++.=.+|.. ++..|.+|..++..+|+-.|+...+
T Consensus 5 ~~~~~~G~L~K~g~----~~~~Wk~R~fvL~~--~~~~L~yyk~~~~~~~~g~i~L~~~ 57 (109)
T 2i5f_A 5 GVIIKQGCLLKQGH----RRKNWKVRKFILRE--DPAYLHYYDPAGAEDPLGAIHLRGC 57 (109)
T ss_dssp CCEEEEEEEEEECT----TTCCEEEEEEEEET--TTTEEEEECTTSCSSCSEEEECTTC
T ss_pred CceeEEEEEEEcCC----CCCCceEEEEEEeC--CCcEEEEECCCCCCCccEEEECCCC
Confidence 34678998875433 24569887777753 2468999999999999988887663
No 8
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=92.39 E-value=1 Score=28.61 Aligned_cols=71 Identities=15% Similarity=0.180 Sum_probs=46.0
Q ss_pred eeeEeeeeeeeccCCCCCcccccceeeeEEEecCCeeeEEecCCCCCCCcccccccceeehhccCCccCCCCCCeeEEe
Q psy1045 33 ECRKEGIVNYLVGENTDGTQKWEKCRLALVKTVGGYMLEFYSPPKSLKPKKGVFCFLITEARETSALEMPDHENTFVLK 111 (113)
Q Consensus 33 e~~rEG~l~yl~~~~~~~~~~WqkcRL~Lrk~~~g~~LEfy~PPKsskPK~~i~Cs~I~EVR~tt~LEMPD~~nTFVLK 111 (113)
.+.+||.|.-.... .-..|++.=.+|. +..|.+|.-++..+|+-.|+...+. |....+....++.+.|.|.
T Consensus 10 ~~~~~G~L~K~~~~---~~~~WkkR~fvL~----~~~L~yy~~~~~~~~~g~i~l~~~~-v~~~~~~~~~~~~~~f~i~ 80 (123)
T 1upq_A 10 PVHIRGWLHKQDSS---GLRLWKRRWFVLS----GHCLFYYKDSREESVLGSVLLPSYN-IRPDGPGAPRGRRFTFTAE 80 (123)
T ss_dssp CEEEEEEEEEECSS---SSCCEEEEEEEEE----TTEEEEESSTTCCSCCEEEEGGGCE-EEECCSSCTTSSSSEEEEE
T ss_pred CceEEEEEEeeCCC---CCCCceeEEEEEe----CCEEEEECCCCCcccceEEECCCCE-EEECCCCccCCCcEEEEEE
Confidence 36789999865432 2357988777775 5688999888889998888765543 3333322333345556553
No 9
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=92.15 E-value=0.46 Score=30.30 Aligned_cols=65 Identities=20% Similarity=0.292 Sum_probs=46.6
Q ss_pred eeeEeeeeeeeccCCCCCcccccceeeeEEEecCCeeeEEecCCCCCCCcccccccceeehhccCCccCCCCCCeeEEe
Q psy1045 33 ECRKEGIVNYLVGENTDGTQKWEKCRLALVKTVGGYMLEFYSPPKSLKPKKGVFCFLITEARETSALEMPDHENTFVLK 111 (113)
Q Consensus 33 e~~rEG~l~yl~~~~~~~~~~WqkcRL~Lrk~~~g~~LEfy~PPKsskPK~~i~Cs~I~EVR~tt~LEMPD~~nTFVLK 111 (113)
++.+||.|.--... ....|++.-.+|. +..|..|..++..+|+-.|+...+..|.... +|.|.|.
T Consensus 7 ~~~~~G~L~K~~~~---~~~~WkkR~fvL~----~~~L~yy~~~~~~~~~g~i~l~~~~~v~~~~-------~~~F~i~ 71 (115)
T 2cod_A 7 GKVKSGWLDKLSPQ---GKRMFQKRWVKFD----GLSISYYNNEKEMYSKGIIPLSAISTVRVQG-------DNKFEVV 71 (115)
T ss_dssp CCCEEEEEEECCSS---SSSCCEEEEEEEC----SSEEEEEESSCCSSCCCEEETTTEEEEEEET-------TTEEEEE
T ss_pred CccEEEEEEEcCCC---CCCCCceEEEEEE----CCEEEEEcCCCCcccCCEEECCcceEEEeCC-------CCEEEEE
Confidence 45688988644321 2457988777775 4578999999999999999999988777542 4666553
No 10
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=92.04 E-value=0.45 Score=32.42 Aligned_cols=61 Identities=11% Similarity=0.134 Sum_probs=45.5
Q ss_pred CcccccceeeeEEEecCCeeeEEecC----CCCCCCcccccccceeehhccCCccCCCCCCeeEEe
Q psy1045 50 GTQKWEKCRLALVKTVGGYMLEFYSP----PKSLKPKKGVFCFLITEARETSALEMPDHENTFVLK 111 (113)
Q Consensus 50 ~~~~WqkcRL~Lrk~~~g~~LEfy~P----PKsskPK~~i~Cs~I~EVR~tt~LEMPD~~nTFVLK 111 (113)
....|+|-=.+|.. .+|..|-+|.= |+..+|+=.|+...|..|..+++-+=|+..++|++.
T Consensus 28 ~~k~WkrRwFvL~~-~~~~~L~Y~k~~~~~~~~~~~~G~I~L~~~~~V~~~~~~~~~~~~~~F~i~ 92 (126)
T 1v5p_A 28 NSGKFLRRYFILDT-QANCLLWYMDNPQNLAVGAGAVGSLQLTYISKVSIATPKQKPKTPFCFVIN 92 (126)
T ss_dssp CSSCEEEEEEEEET-TTTEEEEESSCTTTSCTTCCCSEEEETTTCCEEEECCTTTSCSCSSEEEEE
T ss_pred CCCCccceEEEEec-CCCCEEEEECCCCCCCCCceeeEEEECCCccEEecCCcccCCCCCEEEEEE
Confidence 35689888888862 34677777765 788999999998888888877644445667888775
No 11
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=91.92 E-value=1.6 Score=28.15 Aligned_cols=76 Identities=16% Similarity=0.174 Sum_probs=48.1
Q ss_pred hheeeEeeeeeeeccCCCCCcccccceeeeEEEecCCeeeEEecCCCCCCCccccccccee--ehhccCCccCCCCCCee
Q psy1045 31 VVECRKEGIVNYLVGENTDGTQKWEKCRLALVKTVGGYMLEFYSPPKSLKPKKGVFCFLIT--EARETSALEMPDHENTF 108 (113)
Q Consensus 31 ~~e~~rEG~l~yl~~~~~~~~~~WqkcRL~Lrk~~~g~~LEfy~PPKsskPK~~i~Cs~I~--EVR~tt~LEMPD~~nTF 108 (113)
...+.+||.|.--.. ....|++.-.+|.. ++..|..|..++..+|+-.|+...+. ++.........++.|.|
T Consensus 15 ~~~~~~~G~L~K~g~----~~~~Wk~R~fvL~~--~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F 88 (129)
T 1x05_A 15 RGVIIKQGCLLKQGH----RRKNWKVRKFILRE--DPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESNSNGRKSEEENLF 88 (129)
T ss_dssp CSEEEEEEEEEECCS----SCCCCEEEEEEEEE--TTTEEEEECSSCCSSCSEEEECTTCEEEECCCCCCSSSCSSCSEE
T ss_pred cCCceEEEEEEecCC----CCCCCeeEEEEEeC--CCCEEEEECCCCCCcceeEEEccCCEEEEccCCccccccCCCeEE
Confidence 445779998875432 24569887777764 23689999999989999888877543 22221111112356788
Q ss_pred EEee
Q psy1045 109 VLKG 112 (113)
Q Consensus 109 VLKv 112 (113)
.|..
T Consensus 89 ~i~~ 92 (129)
T 1x05_A 89 EIIT 92 (129)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 7753
No 12
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=91.85 E-value=0.78 Score=29.42 Aligned_cols=73 Identities=12% Similarity=0.122 Sum_probs=45.2
Q ss_pred hheeeEeeeeeeeccCCCCCcccccceeeeEEEecCCeeeEEecCCCCCCCcccccccceeehhccCCccCCCCCCeeEE
Q psy1045 31 VVECRKEGIVNYLVGENTDGTQKWEKCRLALVKTVGGYMLEFYSPPKSLKPKKGVFCFLITEARETSALEMPDHENTFVL 110 (113)
Q Consensus 31 ~~e~~rEG~l~yl~~~~~~~~~~WqkcRL~Lrk~~~g~~LEfy~PPKsskPK~~i~Cs~I~EVR~tt~LEMPD~~nTFVL 110 (113)
...+.+||.|.-.... ....|++.-.+|+ +..|.+|..++..+|+-.|+...+. |......+-..+.+.|.|
T Consensus 18 ~~~~~~~G~L~K~~~~---~~~~Wk~R~fvL~----~~~L~yy~~~~~~~~~g~i~L~~~~-v~~~~~~~~~~~~~~F~i 89 (128)
T 2dkp_A 18 NAPVVRRGWLYKQDST---GMKLWKKRWFVLS----DLCLFYYRDEKEEGILGSILLPSFQ-IALLTSEDHINRKYAFKA 89 (128)
T ss_dssp TSCCCEEEEEEEECCS---SSCCEEEEEEEEE----TTEEEEESSTTCCSEEEEECGGGSE-EEECCGGGCCSSCSEEEE
T ss_pred CCCcEEEEEEEEeCCC---CCCCceeEEEEEe----CCEEEEECCCCCcccceEEEcCceE-EEEcCCcccCCCCeEEEE
Confidence 3446799999654331 2457998888885 4688999999889998777665442 222222222234556665
Q ss_pred e
Q psy1045 111 K 111 (113)
Q Consensus 111 K 111 (113)
.
T Consensus 90 ~ 90 (128)
T 2dkp_A 90 A 90 (128)
T ss_dssp E
T ss_pred E
Confidence 3
No 13
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=91.48 E-value=1.5 Score=29.33 Aligned_cols=58 Identities=16% Similarity=0.058 Sum_probs=41.1
Q ss_pred hhheeeEeeeeeeeccCCCCCcccccceeeeEEEecCCeeeEEecCCCCCCCccccccccee
Q psy1045 30 IVVECRKEGIVNYLVGENTDGTQKWEKCRLALVKTVGGYMLEFYSPPKSLKPKKGVFCFLIT 91 (113)
Q Consensus 30 i~~e~~rEG~l~yl~~~~~~~~~~WqkcRL~Lrk~~~g~~LEfy~PPKsskPK~~i~Cs~I~ 91 (113)
.+..+.++|.|.--..........|++.-.+|+ +..|.+|.-++..+|+-.|+...+.
T Consensus 13 ~~~~~~~~G~L~K~g~~~~~~~k~WkkR~fvL~----~~~L~yyk~~~~~~~~g~i~L~~~~ 70 (148)
T 1u5f_A 13 DLPFVIKAGYLEKRRKDHSFLGFEWQKRWCALS----KTVFYYYGSDKDKQQKGEFAIDGYD 70 (148)
T ss_dssp GCSSEEEEEEEEEECCCSSCSSCSEEEEEEEEE----TTEEEEESSTTCSSCSEEEECTTCE
T ss_pred hCCCccEEEEEEEeCCCCCCcCCCceeEEEEEE----CCEEEEEcCCCCcccceEEEcCCcE
Confidence 356788999998654421112358988666775 4578899999989999888877664
No 14
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.56 E-value=1.3 Score=32.28 Aligned_cols=58 Identities=24% Similarity=0.378 Sum_probs=39.2
Q ss_pred eeEeeeeeeeccCCCCCcccccceeeeEEEecC-C-eeeEEecCCCCC----CCccccc---ccceeeh
Q psy1045 34 CRKEGIVNYLVGENTDGTQKWEKCRLALVKTVG-G-YMLEFYSPPKSL----KPKKGVF---CFLITEA 93 (113)
Q Consensus 34 ~~rEG~l~yl~~~~~~~~~~WqkcRL~Lrk~~~-g-~~LEfy~PPKss----kPK~~i~---Cs~I~EV 93 (113)
.+++|.|-.-.. ..-+ ..|+|.-.+|..++. | -.||+|+-++.. .||=-|. |.+|.++
T Consensus 12 ~vk~G~L~~q~q-~~fg-kKWrk~w~vLy~~S~~GvaRLE~yd~~ek~~r~~~~rrVIrLsdCisV~~~ 78 (127)
T 2d9w_A 12 AVKQGFLYLQQQ-QTFG-KKWRRFGASLYGGSDCALARLELQEGPEKPRRCEAARKVIRLSDCLRVAEA 78 (127)
T ss_dssp SSEEEEEEECBC-SSSS-CBCCEEEEEEECCSSSSCCEEEEECCCSCSSSCSCCEEEECGGGEEEEEEC
T ss_pred cccceEEEeccc-chhh-hhhheeEEEEecCCCCCceeeeeeeccCccccCCCCceEEEhhhCCeEecc
Confidence 668888843222 1222 469999999998865 4 899999998775 4554454 5556555
No 15
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=90.25 E-value=2.5 Score=27.14 Aligned_cols=53 Identities=21% Similarity=0.293 Sum_probs=38.8
Q ss_pred hheeeEeeeeeeeccCCCCCcccccceeeeEEEecCCeeeEEecCC-CCCCCcccccccc
Q psy1045 31 VVECRKEGIVNYLVGENTDGTQKWEKCRLALVKTVGGYMLEFYSPP-KSLKPKKGVFCFL 89 (113)
Q Consensus 31 ~~e~~rEG~l~yl~~~~~~~~~~WqkcRL~Lrk~~~g~~LEfy~PP-KsskPK~~i~Cs~ 89 (113)
..++.+||.|.--.. ....|++.=.+|+. .+..|..|..| +..+|+-.|+...
T Consensus 15 ~~~~~~~G~L~K~g~----~~~~Wk~R~fvL~~--d~~~L~yy~~~~~~~~~~g~i~L~~ 68 (129)
T 1x1g_A 15 SGTVVKQGYLAKQGH----KRKNWKVRRFVLRK--DPAFLHYYDPSKEENRPVGGFSLRG 68 (129)
T ss_dssp CSEEEEEEEEEEECS----SSSSEEEEEEEEEE--SSCEEEEECSSSCCSSCSCCEESTT
T ss_pred CCCEEEEEEEEEECC----CCCCeeeEEEEEeC--CCCeEEEeCCCCcCCccceEEECcC
Confidence 346789999976533 25689887777764 34688999988 7788988888764
No 16
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=90.21 E-value=1.3 Score=28.49 Aligned_cols=68 Identities=18% Similarity=0.175 Sum_probs=48.8
Q ss_pred eeeEeeeeeeeccCCCCCcccccceeeeEEEecCCeeeEEecCCCCCCCcccccccceeehhccCCccCCCCCCeeEEe
Q psy1045 33 ECRKEGIVNYLVGENTDGTQKWEKCRLALVKTVGGYMLEFYSPPKSLKPKKGVFCFLITEARETSALEMPDHENTFVLK 111 (113)
Q Consensus 33 e~~rEG~l~yl~~~~~~~~~~WqkcRL~Lrk~~~g~~LEfy~PPKsskPK~~i~Cs~I~EVR~tt~LEMPD~~nTFVLK 111 (113)
...+||.|.-... ....|++.-.+|. +-.|.+|..++..+|+-.|+...+..|... +-+++.|.|.|.
T Consensus 17 ~~~~~G~L~K~g~----~~~~Wk~R~fvL~----~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~---~~~~~~~~F~i~ 84 (126)
T 1fao_A 17 LGTKEGYLTKQGG----LVKTWKTRWFTLH----RNELKYFKDQMSPEPIRILDLTECSAVQFD---YSQERVNCFCLV 84 (126)
T ss_dssp TTCEEEEEEEECS----SSCCEEEEEEEEE----TTEEEEESSTTCSSCSEEEEGGGCCEEEEE---CSSSSSSEEEEE
T ss_pred CccEEEEEEEcCC----CCCCcccEEEEEE----CCEEEEeCCCCCCCceeEEEccceEEEEec---ccCCCCCEEEEE
Confidence 3568998876543 3457988777775 346899999998999999988887766643 234456778764
No 17
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=90.08 E-value=1.8 Score=27.25 Aligned_cols=68 Identities=16% Similarity=0.134 Sum_probs=47.5
Q ss_pred eeEeeeeeeeccCCCCCcccccceeeeEEEecCCeeeEEecCCCCCCCcccccccceeehhccCCccCCCCCCeeEEe
Q psy1045 34 CRKEGIVNYLVGENTDGTQKWEKCRLALVKTVGGYMLEFYSPPKSLKPKKGVFCFLITEARETSALEMPDHENTFVLK 111 (113)
Q Consensus 34 ~~rEG~l~yl~~~~~~~~~~WqkcRL~Lrk~~~g~~LEfy~PPKsskPK~~i~Cs~I~EVR~tt~LEMPD~~nTFVLK 111 (113)
+.+||.|.--.. ....|++.-.+|+. -.|.+|..++..+|+-.|+...+..+..+ .+-..+.|.|.|.
T Consensus 5 ~~~~G~L~K~g~----~~~~Wk~R~fvL~~----~~L~yy~~~~~~~~~g~i~L~~~~~~~~~--~~~~~~~~~F~i~ 72 (113)
T 1pls_A 5 RIREGYLVKKGS----VFNTWKPMWVVLLE----DGIEFYKKKSDNSPKGMIPLKGSTLTSPC--QDFGKRMFVFKIT 72 (113)
T ss_dssp CSEEEEEEEESS----SSSCCEEEEEEEET----TEEEEESSTTCSSCSEEEESSSCCEESSC--CSSCCSSSEEEEE
T ss_pred CcEEEEEEEeCC----CCCCceEEEEEEEC----CEEEEEeCCCCCCcceEEEcCCCEEEEec--CCCCCCccEEEEE
Confidence 458888864432 24579887777763 35899999999999999988877766422 2334456788774
No 18
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.05 E-value=0.84 Score=28.62 Aligned_cols=69 Identities=12% Similarity=0.142 Sum_probs=46.5
Q ss_pred eeeEeeeeeeeccCCCCCcccccceeeeEEEecCCeeeEEecCCCCCCCcccccccceeehhccCCccCCCCCCeeEEe
Q psy1045 33 ECRKEGIVNYLVGENTDGTQKWEKCRLALVKTVGGYMLEFYSPPKSLKPKKGVFCFLITEARETSALEMPDHENTFVLK 111 (113)
Q Consensus 33 e~~rEG~l~yl~~~~~~~~~~WqkcRL~Lrk~~~g~~LEfy~PPKsskPK~~i~Cs~I~EVR~tt~LEMPD~~nTFVLK 111 (113)
.+.+||.|.--.. ....|++.-.+|.. -.|.+|..++..+|+-.|+...+..|..... ...+.|.|.|.
T Consensus 7 ~~~~~G~L~K~~~----~~~~Wk~R~fvL~~----~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~--~~~~~~~F~i~ 75 (115)
T 2dn6_A 7 GVLKQGYMMKKGH----RRKNWTERWFVLKP----NIISYYVSEDLKDKKGDILLDENCCVESLPD--KDGKKCLFLVK 75 (115)
T ss_dssp SCSEEEEEEEECT----TSSCEEEEEEEECS----SCEEEESSTTCSSEEEEECCCTTCEEEEECC--CTTCCSEEEEE
T ss_pred CceEEEEEEecCC----CCCCcEEeEEEEEC----CEEEEeCCCCCcccCcEEEecCcEEEEECCC--CCCCeeEEEEE
Confidence 3568888875433 34579887777763 4689999999999998888887665554321 11234677664
No 19
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=89.03 E-value=1.8 Score=27.15 Aligned_cols=72 Identities=18% Similarity=0.156 Sum_probs=49.1
Q ss_pred eeEeeeeeeeccCCCCCcccccceeeeEEEecCCeeeEEecCCCCCCCcccccccceeehhccCCc-cCC---CCCCeeE
Q psy1045 34 CRKEGIVNYLVGENTDGTQKWEKCRLALVKTVGGYMLEFYSPPKSLKPKKGVFCFLITEARETSAL-EMP---DHENTFV 109 (113)
Q Consensus 34 ~~rEG~l~yl~~~~~~~~~~WqkcRL~Lrk~~~g~~LEfy~PPKsskPK~~i~Cs~I~EVR~tt~L-EMP---D~~nTFV 109 (113)
..+||.|.-... ....|++.=.+|.. .+..|.+|.-++..+|+-.|+...+..|...... ..| +..+.|.
T Consensus 8 ~~~~G~L~K~g~----~~~~Wk~R~fvL~~--~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~~~~~~~~~~~~~F~ 81 (117)
T 1v5u_A 8 RSYEGILYKKGA----FMKPWKARWFVLDK--TKHQLRYYDHRMDTECKGVIDLAEVEAVAPGTPTIGAPKTVDEKAFFD 81 (117)
T ss_dssp SSEEEEEEECCC----SSSCCEEEEEEEET--TTTEEEEESSSSCSSCCCEEEGGGEEEEECCCCCTTSCSSSCTTTCEE
T ss_pred ccEEEEEEecCC----CCCCceeeEEEEEC--CCCEEEEeecCCCCccceEEEccCcEEEeecCccccccccCCCCeEEE
Confidence 457888765432 24679887777753 2468899999999999999999888877654321 222 3356777
Q ss_pred Ee
Q psy1045 110 LK 111 (113)
Q Consensus 110 LK 111 (113)
|.
T Consensus 82 i~ 83 (117)
T 1v5u_A 82 VK 83 (117)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 20
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=88.14 E-value=3 Score=25.90 Aligned_cols=51 Identities=18% Similarity=0.200 Sum_probs=37.8
Q ss_pred eeeEeeeeeeeccCCCCCcccccceeeeEEEecCCeeeEEecCCCCCCCccccccccee
Q psy1045 33 ECRKEGIVNYLVGENTDGTQKWEKCRLALVKTVGGYMLEFYSPPKSLKPKKGVFCFLIT 91 (113)
Q Consensus 33 e~~rEG~l~yl~~~~~~~~~~WqkcRL~Lrk~~~g~~LEfy~PPKsskPK~~i~Cs~I~ 91 (113)
...+||.|.-... ....|++.-.+|+. -.|.+|..++..+|+-.|+...+.
T Consensus 7 ~~~~~G~L~K~g~----~~~~Wk~R~fvL~~----~~L~yy~~~~~~~~~g~i~L~~~~ 57 (118)
T 1v89_A 7 GPIKMGWLKKQRS----IVKNWQQRYFVLRA----QQLYYYKDEEDTKPQGCMYLPGCT 57 (118)
T ss_dssp CEEEEEEEEEECS----SSSCEEEEEEEEET----TEEEEESSSSCCSCSEEECSTTEE
T ss_pred CCcEEEEEEecCC----CCCCccEEEEEEEC----CEEEEEeCCCCCCceEEEECCCCE
Confidence 4678998876533 24579887777763 388999999989999888877654
No 21
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=86.09 E-value=2.6 Score=26.66 Aligned_cols=51 Identities=16% Similarity=0.255 Sum_probs=37.3
Q ss_pred eeeEeeeeeeeccCCCCCcccccceeeeEEEecCCeeeEEecCCCCCCCccccccccee
Q psy1045 33 ECRKEGIVNYLVGENTDGTQKWEKCRLALVKTVGGYMLEFYSPPKSLKPKKGVFCFLIT 91 (113)
Q Consensus 33 e~~rEG~l~yl~~~~~~~~~~WqkcRL~Lrk~~~g~~LEfy~PPKsskPK~~i~Cs~I~ 91 (113)
...+||.|.--.. ....|++.-.+|+ +..|..|..++..+|+-.|+...+.
T Consensus 4 ~~~~~G~L~K~g~----~~~~Wk~R~fvL~----~~~L~yy~~~~~~~~~g~i~L~~~~ 54 (127)
T 1fgy_A 4 NPDREGWLLKLGG----RVKTWKRRWFILT----DNCLYYFEYTTDKEPRGIIPLENLS 54 (127)
T ss_dssp SCSEEEEEEEECS----SSCCEEEEEEEEE----TTEEEEESSTTCSSCSEEEECTTCE
T ss_pred CCceEeEEEEECC----CCCCeEEEEEEEE----CCEEEEeCCCCCCCcceEEECCceE
Confidence 4568898865533 2457988777775 3469999999989998888776653
No 22
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=85.66 E-value=1.2 Score=34.13 Aligned_cols=71 Identities=17% Similarity=0.143 Sum_probs=49.4
Q ss_pred hhheeeEeeeeeeeccCCCCCcccccceeeeEEEecC---CeeeEEecCCCC-----CCCcccccccceeehhccCCccC
Q psy1045 30 IVVECRKEGIVNYLVGENTDGTQKWEKCRLALVKTVG---GYMLEFYSPPKS-----LKPKKGVFCFLITEARETSALEM 101 (113)
Q Consensus 30 i~~e~~rEG~l~yl~~~~~~~~~~WqkcRL~Lrk~~~---g~~LEfy~PPKs-----skPK~~i~Cs~I~EVR~tt~LEM 101 (113)
...++.++|.|.-. ..|++.=.+|+.... -+.|+.|.-++. .+|+-.|....+..|.... -
T Consensus 6 ~~~~v~k~G~L~K~--------K~WkkRwFVL~~~~~~G~~~~L~YYk~~~~~~~~~~~p~g~I~L~~~~~V~~~~---~ 74 (264)
T 1qqg_A 6 GFSDVRKVGYLRKP--------KSMHKRFFVLRAASEAGGPARLEYYENEKKWRHKSSAPKRSIPLESCFNINKRA---D 74 (264)
T ss_dssp ---CEEEEEEEECT--------TTCCEEEEEEECCBTTTBSSEEEEESSHHHHHTTCSCCSEEEEGGGEEEEEEEC---C
T ss_pred CCCCccEEEEEEEC--------CCCEeEEEEEECCCCCCCCCEEEEECCCccccccccCcceEEEeeceEEEEecc---C
Confidence 35567899998633 589998888887632 469999998887 6899999988877664321 1
Q ss_pred CCCCCeeEEe
Q psy1045 102 PDHENTFVLK 111 (113)
Q Consensus 102 PD~~nTFVLK 111 (113)
..+.|+|.|.
T Consensus 75 ~~~~~~F~I~ 84 (264)
T 1qqg_A 75 SKNKHLVALY 84 (264)
T ss_dssp SSCSSEEEEE
T ss_pred CCCCcEEEEE
Confidence 3346777664
No 23
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=85.61 E-value=0.59 Score=30.32 Aligned_cols=74 Identities=18% Similarity=0.204 Sum_probs=42.1
Q ss_pred heeeEeeeeeeeccCC-C---CCcccccceeeeEEEecCCeeeEEecCCCCCC------CcccccccceeehhccCCccC
Q psy1045 32 VECRKEGIVNYLVGEN-T---DGTQKWEKCRLALVKTVGGYMLEFYSPPKSLK------PKKGVFCFLITEARETSALEM 101 (113)
Q Consensus 32 ~e~~rEG~l~yl~~~~-~---~~~~~WqkcRL~Lrk~~~g~~LEfy~PPKssk------PK~~i~Cs~I~EVR~tt~LEM 101 (113)
..+.+||.|..-.... . .+...|+++-.+|+. ..|.+|..++..+ |...|... ........+.
T Consensus 6 ~~v~~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~~----~~L~yyk~~~~~~~~~~~~~~~~i~l~---~~~~~~~~~~ 78 (123)
T 1wjm_A 6 SGEQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLRR----GSLGFYKDAKAASAGVPYHGEVPVSLA---RAQGSVAFDY 78 (123)
T ss_dssp CCCCEEEEEEEEEEEEETTEECSCCCCEEEEEEEET----TEEEEESSHHHHTTTCBSSSCCCEECT---TCEEEECTTC
T ss_pred CCeEEEEEEEEEEEEeCCCccCCCCCccEEEEEEEC----CEEEEEEcccccccCcccCCCceEEcc---CcEEeecccc
Confidence 4567999998543211 1 135789999888874 4788998877643 22222221 1111112244
Q ss_pred CCCCCeeEEee
Q psy1045 102 PDHENTFVLKG 112 (113)
Q Consensus 102 PD~~nTFVLKv 112 (113)
.++.|+|-|..
T Consensus 79 ~~r~~~F~i~~ 89 (123)
T 1wjm_A 79 RKRKHVFKLGL 89 (123)
T ss_dssp SSCSSEEEEEC
T ss_pred cCCCCEEEEEE
Confidence 56688888763
No 24
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=85.39 E-value=1.8 Score=31.81 Aligned_cols=77 Identities=13% Similarity=0.054 Sum_probs=48.5
Q ss_pred hheeeEeeeeeeeccCCCCCcccccceeeeEEEecCCeeeEEecCCCCCCCcccccccceeehhccCCccCCCCCCeeEE
Q psy1045 31 VVECRKEGIVNYLVGENTDGTQKWEKCRLALVKTVGGYMLEFYSPPKSLKPKKGVFCFLITEARETSALEMPDHENTFVL 110 (113)
Q Consensus 31 ~~e~~rEG~l~yl~~~~~~~~~~WqkcRL~Lrk~~~g~~LEfy~PPKsskPK~~i~Cs~I~EVR~tt~LEMPD~~nTFVL 110 (113)
+..+.++|.|.--..........|++.-.+|+ +..|..|.-++..+|+-.|+...+.-+......+-..+.|.|.|
T Consensus 103 l~~v~k~G~L~Kkg~~~~~~~k~WkkRwfVL~----~~~L~Yyk~~~~~~p~g~I~L~~~~~v~~~~~~~~~~k~~~F~I 178 (211)
T 1u5e_A 103 LPFVIKAGYLEKRRKDHSFLGFEWQKRWCALS----KTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEI 178 (211)
T ss_dssp CSSEEEEEEEEEEEHHHHTTTCCCEEEEEEEE----TTEEEEESSTTCSSCSEEEECTTCEEEECGGGCSSTTGGGEEEE
T ss_pred cCCccEEEEEEEECCCCCcCCCCcEeEEEEEE----CCEEEEEcCCCCccceEEEEeCCcEEEEcCCccccCCCCCEEEE
Confidence 45578899887543311001358988777775 34788999999999998888777766542211122233566766
Q ss_pred e
Q psy1045 111 K 111 (113)
Q Consensus 111 K 111 (113)
.
T Consensus 179 ~ 179 (211)
T 1u5e_A 179 C 179 (211)
T ss_dssp E
T ss_pred E
Confidence 4
No 25
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=84.62 E-value=4.2 Score=26.42 Aligned_cols=69 Identities=23% Similarity=0.354 Sum_probs=41.5
Q ss_pred EeeeeeeeccCCCCCcccccceeeeEEEecCCeeeEEecCCCCCCCcccccccce--eehhccCCccCCCCCCeeEEe
Q psy1045 36 KEGIVNYLVGENTDGTQKWEKCRLALVKTVGGYMLEFYSPPKSLKPKKGVFCFLI--TEARETSALEMPDHENTFVLK 111 (113)
Q Consensus 36 rEG~l~yl~~~~~~~~~~WqkcRL~Lrk~~~g~~LEfy~PPKsskPK~~i~Cs~I--~EVR~tt~LEMPD~~nTFVLK 111 (113)
+||.|..=.+....+...|+++=.+|+ |..|-+|--++..+|.-.|+.... +.++ +.+-..+.|+|-|.
T Consensus 2 keG~L~kK~g~~~~~~k~Wk~rwfvL~----~~~L~~yk~~~~~~p~~~i~l~~~~~~~~~---~~~~~~r~~~F~l~ 72 (112)
T 3cxb_B 2 KEGMLHYKAGTSYLGKEHWKTCFVVLS----NGILYQYPDRTDVIPLLSVNMGGEQCGGCR---RANTTDRPHAFQVI 72 (112)
T ss_dssp EEEEEEECCSCCCSSCCCCEEEEEEEE----TTEEEEESSSSCCSCSEEEETTC-CEEEEE---ECCCSSCTTEEEEE
T ss_pred ceEEEEEeCCCCCCCCCCceEEEEEEE----CCEEEEECCCCCCCccceEEecCCEEEeee---ccCCCCCCeEEEEE
Confidence 678775432211124678999988886 358889988888888876654421 1111 12233456777664
No 26
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=83.56 E-value=5.8 Score=24.77 Aligned_cols=67 Identities=10% Similarity=0.124 Sum_probs=45.6
Q ss_pred eeEeeeeeeeccCCCCCcccccceeeeEEEecCCeeeEEecCCCCCCCcccccccceeehhccCCccCCCCCCeeEEe
Q psy1045 34 CRKEGIVNYLVGENTDGTQKWEKCRLALVKTVGGYMLEFYSPPKSLKPKKGVFCFLITEARETSALEMPDHENTFVLK 111 (113)
Q Consensus 34 ~~rEG~l~yl~~~~~~~~~~WqkcRL~Lrk~~~g~~LEfy~PPKsskPK~~i~Cs~I~EVR~tt~LEMPD~~nTFVLK 111 (113)
..+||.|.--. .....|++.-.+|+ +..|.+|.-++..+|+-.|+...+..+.... -..+.|+|-|.
T Consensus 8 ~~~~G~L~K~~----~~~~~Wk~RwfvL~----~~~L~yyk~~~~~~~~~~i~L~~~~~~~~~~---~~~~~~~F~i~ 74 (109)
T 1wgq_A 8 STMSGYLYRSK----GSKKPWKHLWFVIK----NKVLYTYAASEDVAALESQPLLGFTVTLVKD---ENSESKVFQLL 74 (109)
T ss_dssp CSCEEEEEEES----STTSCCEEEEEEEE----TTEEEEESCTTCSSCSEEEECSSEEEEECCC---SSCSSSEEEEE
T ss_pred CeEEEEEEeCC----CCCCCceeEEEEEe----CCEEEEECCCCcCccCceEECCCCEEEECCC---CCCCCcEEEEE
Confidence 45788776432 23468988777776 3688899999999999999887776654321 11235777664
No 27
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=81.56 E-value=2.8 Score=26.33 Aligned_cols=71 Identities=17% Similarity=0.187 Sum_probs=43.6
Q ss_pred eeEeeeeeeeccCCCCCcccccceeeeEEEecCCeeeEEecCCCCCCCcccccccc-eeehh---ccCCccCCCC---CC
Q psy1045 34 CRKEGIVNYLVGENTDGTQKWEKCRLALVKTVGGYMLEFYSPPKSLKPKKGVFCFL-ITEAR---ETSALEMPDH---EN 106 (113)
Q Consensus 34 ~~rEG~l~yl~~~~~~~~~~WqkcRL~Lrk~~~g~~LEfy~PPKsskPK~~i~Cs~-I~EVR---~tt~LEMPD~---~n 106 (113)
+.+||.|.-... .-..|++--.+|+ .+..|.+|.-++..+|+-.|+... .++++ .+...+.|+. .|
T Consensus 5 ~~~~G~L~K~g~----~~k~WkkR~fvL~---~~~~L~yyk~~~~~~~~g~i~l~~~~i~l~~~~~v~~v~~~~~~~~~~ 77 (112)
T 3aj4_A 5 FVKSGWLLRQST----ILKRWKKNWFDLW---SDGHLIYYDDQTRQNIEDKVHMPMDCINIRTGQECRDTQPPDGKSKDC 77 (112)
T ss_dssp CSEEEEEEEECS----SSCCEEEEEEEEC---TTSEEEEESSTTCCSEEEEEEHHHHEEEEEEGGGCCSCCCSTTCCGGG
T ss_pred eeEEEEEEeeCC----CCCCeeceEEEEe---eCCEEEEEcCCCCCCCCccccccccceeecccccccccCCCCCCCcCc
Confidence 458888875533 3458988767775 356788998888888886665443 22333 3333333333 45
Q ss_pred eeEEe
Q psy1045 107 TFVLK 111 (113)
Q Consensus 107 TFVLK 111 (113)
.|.|.
T Consensus 78 ~F~i~ 82 (112)
T 3aj4_A 78 MLQIV 82 (112)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77764
No 28
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=78.19 E-value=5.1 Score=29.41 Aligned_cols=51 Identities=20% Similarity=0.212 Sum_probs=37.4
Q ss_pred ccccceeeeEEEecCCeeeEEecCCCCCCCcccccccceeehhccCCccCCCCCCeeEEe
Q psy1045 52 QKWEKCRLALVKTVGGYMLEFYSPPKSLKPKKGVFCFLITEARETSALEMPDHENTFVLK 111 (113)
Q Consensus 52 ~~WqkcRL~Lrk~~~g~~LEfy~PPKsskPK~~i~Cs~I~EVR~tt~LEMPD~~nTFVLK 111 (113)
..|++-=.+|+ +-.|.+|.-++..+|+-.|+...+..|... .++.|.|.|.
T Consensus 77 k~WkkRwfvL~----~~~L~Yyk~~~~~~~~g~I~L~~~~~v~~~-----~~k~~~F~I~ 127 (228)
T 3tfm_A 77 RNWKKRWFVLR----QSKLMYFENDSEEKLKGTVEVRSAKEIIDN-----TNKENGIDII 127 (228)
T ss_dssp GGCEEEEEEEC----SSEEEEESSTTCCSEEEEEEGGGCSEEEEE-----TTTTSEEEEE
T ss_pred CCceEEEEEEe----CCEEEEEeCCCCcceeEEEEcCCCEEeccC-----CCCCcEEEEE
Confidence 78977666665 457899999999999999988888776532 2456666653
No 29
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=75.08 E-value=6.8 Score=26.27 Aligned_cols=68 Identities=10% Similarity=0.053 Sum_probs=42.4
Q ss_pred EeeeeeeeccCCCCCcccccceeeeEEEecCCeeeEEecCCCCCCCcccccccceeehhccCCccCCCCCCeeEE
Q psy1045 36 KEGIVNYLVGENTDGTQKWEKCRLALVKTVGGYMLEFYSPPKSLKPKKGVFCFLITEARETSALEMPDHENTFVL 110 (113)
Q Consensus 36 rEG~l~yl~~~~~~~~~~WqkcRL~Lrk~~~g~~LEfy~PPKsskPK~~i~Cs~I~EVR~tt~LEMPD~~nTFVL 110 (113)
..|.|.... ....|+|-=.+|+. ...+.|-+|..++..+|.-.|+...- +|....+.+-+++.++|=|
T Consensus 10 ~~G~L~k~~-----~~~~WkkrWfVL~~-~~~~~Ly~Yk~~~d~~p~g~I~L~g~-~V~~~~~~~~~~~~~~Fki 77 (112)
T 2coc_A 10 LCGPLRLSE-----SGETWSEVWAAIPM-SDPQVLHLQGGSQDGRLPRTIPLPSC-KLSVPDPEERLDSGHVWKL 77 (112)
T ss_dssp SEEEEEEES-----SSSCEEEEEEECCT-TCTTCEEEECCTTCSSSCSEECGGGC-EEECCCSSSCCSSSEEEEE
T ss_pred EEEEEEecC-----CCCCceEEEEEEEC-CCccEEEEECCCCccCcceEEEcCCC-EEEecCcccccCCCCEEEE
Confidence 347776642 25679875555533 33489999999999999999997443 2322333344445555543
No 30
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=73.75 E-value=6.9 Score=24.99 Aligned_cols=71 Identities=14% Similarity=0.106 Sum_probs=43.6
Q ss_pred eeeEeeeeeeeccCCCCCcccccceeeeEEEecCCeeeEEecCCCCCCCcccccccceeehhccCCccC-CCCCCeeEEe
Q psy1045 33 ECRKEGIVNYLVGENTDGTQKWEKCRLALVKTVGGYMLEFYSPPKSLKPKKGVFCFLITEARETSALEM-PDHENTFVLK 111 (113)
Q Consensus 33 e~~rEG~l~yl~~~~~~~~~~WqkcRL~Lrk~~~g~~LEfy~PPKsskPK~~i~Cs~I~EVR~tt~LEM-PD~~nTFVLK 111 (113)
.+.+||.|.--.. ....|++-=.+|+. +-.|-+|.-++..+|+-.|+...+.-+. +...+. ..+.|+|.|.
T Consensus 7 ~~~~~G~L~K~g~----~~k~WkkRwfvL~~---~~~L~yy~~~~~~~~~g~i~L~~~~~~~-~~~~~~~~~~~~~F~I~ 78 (125)
T 1unq_A 7 AIVKEGWLHKRGE----YIKTWRPRYFLLKN---DGTFIGYKERPQDVDQREAPLNNFSVAQ-CQLMKTERPRPNTFIIR 78 (125)
T ss_dssp CEEEEEEEEEECS----SSCCEEEEEEEEET---TSEEEEESSCCCSHHHHTSCSEEEECTT-CEEEEECSSSTTEEEEE
T ss_pred CeeEEeeEEeccC----CccCccCcEEEEec---CCEEEEEeCCCCCCCCceeEccceeEEe-eeecccccCCCCEEEEE
Confidence 3668998875433 24679887777752 2366677766777888888877765332 211111 2346888775
No 31
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=72.34 E-value=0.81 Score=40.16 Aligned_cols=15 Identities=67% Similarity=1.017 Sum_probs=13.9
Q ss_pred Chhhhhhhccccccc
Q psy1045 1 MAIAMALCGGIGRIK 15 (113)
Q Consensus 1 ~~~~~~~~~~~~~~~ 15 (113)
||||||..||||-|-
T Consensus 108 MAIamAr~GGiGvIH 122 (556)
T 4af0_A 108 MAIALALHGGLGIIH 122 (556)
T ss_dssp HHHHHHHTTCEEEEC
T ss_pred HHHHHHHCCCeEEEc
Confidence 799999999999983
No 32
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=71.44 E-value=3.4 Score=26.82 Aligned_cols=75 Identities=17% Similarity=0.225 Sum_probs=44.3
Q ss_pred eeeEeeeeeeecc-CCC---CCcccccceeeeEEEecCCeeeEEecCCCCCCCccccccc--ceeehhccCCccCCC---
Q psy1045 33 ECRKEGIVNYLVG-ENT---DGTQKWEKCRLALVKTVGGYMLEFYSPPKSLKPKKGVFCF--LITEARETSALEMPD--- 103 (113)
Q Consensus 33 e~~rEG~l~yl~~-~~~---~~~~~WqkcRL~Lrk~~~g~~LEfy~PPKsskPK~~i~Cs--~I~EVR~tt~LEMPD--- 103 (113)
.+.+||.|+-=.. +.. .+...|+++=.+|+. ..|-||--++..+|+-+++.. ..++++.++....+|
T Consensus 7 ~v~k~G~L~rK~~~~~~gkk~~~~~Wk~rw~vL~~----~~L~~yk~~~~~~~~~~~~~~~~~~i~L~~~~v~~~~d~~k 82 (122)
T 1dro_A 7 GEGHEGYVTRKHEWDSTTKKASNRSWDKVYMAAKA----GRISFYKDQKGYKSNPELTFRGEPSYDLQNAAIEIASDYTK 82 (122)
T ss_dssp SSSEEEEEEEECSCCCCCCTTCCCCCEEEEEEESS----SCCBEESSSSHHHHCTTCCSSCCCBCCCSSCCCEECCSSSS
T ss_pred ceEEEEEEEEEEEEeCCCccCCCCCccEEEEEEEC----CEEEEEeCCcccccCCCcccCCCceEECCCCEEEeCCCCCC
Confidence 3569999964221 111 145789988888863 578899888876664344322 234555554333333
Q ss_pred CCCeeEEe
Q psy1045 104 HENTFVLK 111 (113)
Q Consensus 104 ~~nTFVLK 111 (113)
+.|+|-|.
T Consensus 83 r~~~F~l~ 90 (122)
T 1dro_A 83 KKHVLRVK 90 (122)
T ss_dssp STTEEEEE
T ss_pred CCeEEEEE
Confidence 35788775
No 33
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=70.35 E-value=6.6 Score=25.23 Aligned_cols=71 Identities=17% Similarity=0.277 Sum_probs=43.3
Q ss_pred eeEeeeeeeeccCCCCCcccccceeeeEEEecCCeeeEEecCCCC---CCCccccccccee--ehhccCCccCCCCCCee
Q psy1045 34 CRKEGIVNYLVGENTDGTQKWEKCRLALVKTVGGYMLEFYSPPKS---LKPKKGVFCFLIT--EARETSALEMPDHENTF 108 (113)
Q Consensus 34 ~~rEG~l~yl~~~~~~~~~~WqkcRL~Lrk~~~g~~LEfy~PPKs---skPK~~i~Cs~I~--EVR~tt~LEMPD~~nTF 108 (113)
+.++|.|.-... ...-..|++-=.+|+. ..|.+|.-|+. .+|+-.|+...+. +|.... -+...+.|+|
T Consensus 5 v~~~G~L~K~~~--~~~~~~WkrRwfvL~~----~~L~yyk~~~d~~~~~p~g~I~L~~~~~~~v~~~~-~~~~~~~~~F 77 (134)
T 2y7b_A 5 VEERGFLTIFED--VSGFGAWHRRWCVLSG----NCISYWTYPDDEKRKNPIGRINLANCTSRQIEPAN-REFCARRNTF 77 (134)
T ss_dssp CCEEEEEEEEEE--ETTEEEEEEEEEEEET----TEEEEESSHHHHTTSCCSEEEEGGGBCSSSCEECC-TTTCCCTTEE
T ss_pred ceEEeeEEEEcC--CCCCCCcEEEEEEEEC----CEEEEECCCCcccccCceEEEEhhhCccccccccc-hhhccCCCEE
Confidence 568888875421 1134689887777753 48889986655 7888777766643 233321 1233456777
Q ss_pred EEe
Q psy1045 109 VLK 111 (113)
Q Consensus 109 VLK 111 (113)
.|.
T Consensus 78 ~i~ 80 (134)
T 2y7b_A 78 ELI 80 (134)
T ss_dssp EEE
T ss_pred EEE
Confidence 664
No 34
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=68.80 E-value=9.1 Score=24.63 Aligned_cols=69 Identities=12% Similarity=0.120 Sum_probs=44.7
Q ss_pred eeEeeeeeeeccCCCCCcccccceeeeEEEecCCeeeEEecCCCCCCCcccccccceeehhccCCccCCCCCCeeEEe
Q psy1045 34 CRKEGIVNYLVGENTDGTQKWEKCRLALVKTVGGYMLEFYSPPKSLKPKKGVFCFLITEARETSALEMPDHENTFVLK 111 (113)
Q Consensus 34 ~~rEG~l~yl~~~~~~~~~~WqkcRL~Lrk~~~g~~LEfy~PPKsskPK~~i~Cs~I~EVR~tt~LEMPD~~nTFVLK 111 (113)
..+||.|.-.... ..-..|++--.+|+. ++..|..|.-++..+|+-.|+...+..+.. -+...+.|.|.
T Consensus 8 ~~~~G~L~K~g~~--~~~k~WkkRwfvL~~--~~~~L~Yy~~~~~~~~~g~I~L~~~~~~~~-----~~~~~~~F~i~ 76 (119)
T 2dhk_A 8 KKLCGYLSKFGGK--GPIRGWKSRWFFYDE--RKCQLYYSRTAQDANPLDSIDLSSAVFDCK-----ADAEEGIFEIK 76 (119)
T ss_dssp CCCEEEEEECSCS--SSSCCCEEEEEEEET--TTTEEEEESSTTCCSCSEEEEGGGCEEEEC-----TTGGGCEEEEE
T ss_pred CcEEEEEEecCCC--CCCCCceeEEEEEEC--CccEEEEECCCCCcccccEEECCCCEEEec-----CCCCCCEEEEE
Confidence 3467777654321 124579876666643 346899999999899998888877765542 12345667664
No 35
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=68.68 E-value=18 Score=24.38 Aligned_cols=53 Identities=13% Similarity=0.228 Sum_probs=26.3
Q ss_pred eeeEeeeeeeec---cC---CCCCcccccceeeeEEEecCCeeeEEecCCCC--CCCcccccccc
Q psy1045 33 ECRKEGIVNYLV---GE---NTDGTQKWEKCRLALVKTVGGYMLEFYSPPKS--LKPKKGVFCFL 89 (113)
Q Consensus 33 e~~rEG~l~yl~---~~---~~~~~~~WqkcRL~Lrk~~~g~~LEfy~PPKs--skPK~~i~Cs~ 89 (113)
++.+||.|..-. .. .......|++.-.+|+. ..|.+|.-++. .+|+-.|+...
T Consensus 2 dv~~eG~L~~k~~~~~~gkK~g~~~k~WkkRwfvL~~----~~L~yyk~~~~~~~~~~g~i~l~~ 62 (168)
T 2j59_M 2 DAAKEGWLHFRPLVTDKGKRVGGSIRPWKQMYVVLRG----HSLYLYKDKREQTTPSEEEQPISV 62 (168)
T ss_dssp -CCEEEEEEEEECC------------CCEEEEEEEET----TEEEEESCTTCC--------CEEC
T ss_pred CCcEEEEEeeeeecccCCcccCCCCCCceEEEEEEeC----CEEEEEECCcccccccCCceEecc
Confidence 467899998421 11 11234679988888863 47888888754 56665555444
No 36
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=64.01 E-value=28 Score=22.96 Aligned_cols=74 Identities=20% Similarity=0.347 Sum_probs=41.6
Q ss_pred heeeEeeeeeee-ccCCC-CCcccccceeeeEEEecCCeeeEEecCCC-----------CCCCcccccccceeehhccCC
Q psy1045 32 VECRKEGIVNYL-VGENT-DGTQKWEKCRLALVKTVGGYMLEFYSPPK-----------SLKPKKGVFCFLITEARETSA 98 (113)
Q Consensus 32 ~e~~rEG~l~yl-~~~~~-~~~~~WqkcRL~Lrk~~~g~~LEfy~PPK-----------sskPK~~i~Cs~I~EVR~tt~ 98 (113)
..+.+||.|+-- ..+.. .....|.++=.+|+ |..|-+|--++ .++|.-.|+.....-. .+
T Consensus 10 ~~~~k~G~L~kk~~~~~G~~~~k~Wk~rwfvL~----~~~L~yykd~~~~~~~~~~~~~~~~p~g~I~L~~~~v~---~~ 82 (129)
T 2p0d_A 10 HEVEKSGLLNMTKIAQGGRKLRKNWGPSWVVLT----GNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGAALA---HG 82 (129)
T ss_dssp CSEEEEEEEEEEEEEETTEECCCCCEEEEEEEE----SSEEEEESCC--------------CCSEEEECTTCEEE---EC
T ss_pred cceeEEEEEEEeeeccCCCcCCCCceEEEEEEe----CCEEEEEcCcccccccccccccCCCCccEEEeCCcEEE---EC
Confidence 357799999742 11111 01268988888887 46788898885 3467665554322211 12
Q ss_pred ccCCCCCCeeEEee
Q psy1045 99 LEMPDHENTFVLKG 112 (113)
Q Consensus 99 LEMPD~~nTFVLKv 112 (113)
.|-+.+.|+|-|+.
T Consensus 83 ~~~~kr~~~F~l~t 96 (129)
T 2p0d_A 83 RHLSSRRNVLHIRT 96 (129)
T ss_dssp TTSCSSSSEEEEEC
T ss_pred CCCCCCCcEEEEEc
Confidence 23344568887763
No 37
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=58.41 E-value=21 Score=23.45 Aligned_cols=45 Identities=16% Similarity=0.253 Sum_probs=27.8
Q ss_pred heeeEeeeeeeecc-CCC--CCcccccceeeeEEEecCCeeeEEecCCCCCC
Q psy1045 32 VECRKEGIVNYLVG-ENT--DGTQKWEKCRLALVKTVGGYMLEFYSPPKSLK 80 (113)
Q Consensus 32 ~e~~rEG~l~yl~~-~~~--~~~~~WqkcRL~Lrk~~~g~~LEfy~PPKssk 80 (113)
.++.+||.|+.=.. +.. .+...|+++=.+|+. -.|.||--+++..
T Consensus 6 ~~v~keG~L~rK~~~~~gkk~~~r~W~~~w~VL~~----~~L~~yKd~~~~~ 53 (124)
T 3pp2_A 6 KTLDKAGVLHRTKTADKGKRLRKKHWSASWTVLEG----GVLTFFKDSKTSA 53 (124)
T ss_dssp ---CEEEEEEEEEEEETTEECSSCCCEEEEEEEET----TEEEEESCSBCC-
T ss_pred CcEEEEEEEEEEEeccCCccCCCCCceEEEEEEEC----CEEEEEecCcccc
Confidence 34679999985321 211 123589998888873 5788998777653
No 38
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=56.94 E-value=14 Score=25.09 Aligned_cols=44 Identities=11% Similarity=0.046 Sum_probs=29.2
Q ss_pred ccccceeeeEEEecCCeeeEEe--cCCCCCCCcccccccceeehhccC
Q psy1045 52 QKWEKCRLALVKTVGGYMLEFY--SPPKSLKPKKGVFCFLITEARETS 97 (113)
Q Consensus 52 ~~WqkcRL~Lrk~~~g~~LEfy--~PPKsskPK~~i~Cs~I~EVR~tt 97 (113)
..|++-|+.... ..+..+ -| .|++.++++-.|+.++|.|||.=.
T Consensus 25 ~~~~k~r~f~l~-~~~~~~-w~~s~~~~~~~~~~~i~i~~I~eIr~G~ 70 (131)
T 1mai_A 25 SSWRRERFYKLQ-EDCKTI-WQESRKVMRSPESQLFSIEDIQEVRMGH 70 (131)
T ss_dssp SSCEEEEEEEEC-TTSSEE-EECCCCTTCCTTTTEEEGGGEEEEEESS
T ss_pred CCcceeEEEEEC-CCCCEE-EeCCcCCCCCCcCcEEEHhhhHHHHCCC
Confidence 456666665544 335555 44 344455678889999999999864
No 39
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=56.51 E-value=17 Score=26.33 Aligned_cols=68 Identities=15% Similarity=0.200 Sum_probs=41.0
Q ss_pred EeeeeeeeccCCCCCcccccceeeeEEEecCCeeeEEecCCCCCCCcccccccceeehhccCCc-----cCCCCCCeeEE
Q psy1045 36 KEGIVNYLVGENTDGTQKWEKCRLALVKTVGGYMLEFYSPPKSLKPKKGVFCFLITEARETSAL-----EMPDHENTFVL 110 (113)
Q Consensus 36 rEG~l~yl~~~~~~~~~~WqkcRL~Lrk~~~g~~LEfy~PPKsskPK~~i~Cs~I~EVR~tt~L-----EMPD~~nTFVL 110 (113)
.||.|..-.. +...|++.-.+|+. -.|-+|.-+++.+|+-.|+...+..+.-.+.. .=++..++|.|
T Consensus 170 ~~G~L~k~~~----~~k~WkkR~fvL~~----~~L~yyk~~~~~~~~~~i~l~~l~~~~v~~~~~~~~~~~~~~~~~F~i 241 (291)
T 3tca_A 170 LEGALYLKED----GKKSWKRRYFLLRA----SGIYYVPKGKTKTSRDLACFIQFENVNIYYGIQCKMKYKAPTDHCFVL 241 (291)
T ss_dssp CEEEEEEECT----TSSCEEEEEEEECS----SEEEECCTTCCSSTTTCEEEEEGGGCEEEEECSHHHHHCCSSSCEEEE
T ss_pred eEEEEEEeCC----CCCCceEEEEEEeC----CEEEEEecCccccccCceeeccceeEEEEecCccccccCCCCCeEEEE
Confidence 5676665433 35679998888853 34778888888889877665544333221111 12334677777
Q ss_pred e
Q psy1045 111 K 111 (113)
Q Consensus 111 K 111 (113)
+
T Consensus 242 ~ 242 (291)
T 3tca_A 242 K 242 (291)
T ss_dssp E
T ss_pred E
Confidence 5
No 40
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=56.21 E-value=30 Score=27.66 Aligned_cols=55 Identities=16% Similarity=0.145 Sum_probs=39.9
Q ss_pred heeeEeeeeeeeccCCCCCcccccceeeeEEEecCCeeeEEecCCCCCCCcccccccceeeh
Q psy1045 32 VECRKEGIVNYLVGENTDGTQKWEKCRLALVKTVGGYMLEFYSPPKSLKPKKGVFCFLITEA 93 (113)
Q Consensus 32 ~e~~rEG~l~yl~~~~~~~~~~WqkcRL~Lrk~~~g~~LEfy~PPKsskPK~~i~Cs~I~EV 93 (113)
.++.++|.|.-.... ....|++-=.+|+ +..|..|.-|+..+|+=.|+...+..+
T Consensus 267 ~~~~k~G~L~K~g~~---~~k~WKkRwFVL~----~~~L~YYk~~~d~~~~G~I~L~~~~~~ 321 (386)
T 3lju_X 267 RNYLKEGYMEKTGPK---QTEGFRKRWFTMD----DRRLMYFKDPLDAFARGEVFIGSKESG 321 (386)
T ss_dssp CCCSEEEEEEECCTT---SCSCCEEEEEEEE----TTEEEEESSTTCSBCSEEEECCCGGGT
T ss_pred cccceeeeEEEECCC---CCCCCcccEEEEE----CCEEEEEecCCCcccceEEEeecceee
Confidence 456788887644331 1267988777887 577889999999999988887666554
No 41
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=49.17 E-value=40 Score=25.54 Aligned_cols=73 Identities=23% Similarity=0.406 Sum_probs=40.0
Q ss_pred hheeeEeeeeee---e--ccCC---CCCcccccceeeeEEEecCCeeeEEecCC------CCCCCccccccc--ceeehh
Q psy1045 31 VVECRKEGIVNY---L--VGEN---TDGTQKWEKCRLALVKTVGGYMLEFYSPP------KSLKPKKGVFCF--LITEAR 94 (113)
Q Consensus 31 ~~e~~rEG~l~y---l--~~~~---~~~~~~WqkcRL~Lrk~~~g~~LEfy~PP------KsskPK~~i~Cs--~I~EVR 94 (113)
...+.|||.|.. + .-.. ..+-..|++.=.+|+. ..|-+|-.+ ..++|+-.|+.. .|..
T Consensus 8 ~~~v~K~G~L~~k~~~~~~K~g~~~~~~~K~WkrRWfVL~~----~~L~yyK~~~~~~~~~~~~p~g~I~L~~~~v~~-- 81 (263)
T 3a8p_A 8 QGVVRKAGWLFFKPLVTLQKERKLELVARRKWKQYWVTLKG----CTLLFYETYGKNSTEQNSAPRCALFAEDSIVQS-- 81 (263)
T ss_dssp --CEEEEEEEEEEEEEEEEGGGEEEECTTCCCEEEEEEEET----TEEEEESSCCC------CCCSEEEECTTCEEEE--
T ss_pred CCCeEEEEEeeecccccccCCCCccCccCCCceEEEEEEcC----CEEEEEecCcccccccccCccceEEcCCcEEEE--
Confidence 455789999972 1 1110 1124589888888863 478899874 345676555542 1211
Q ss_pred ccCCccCCCCCCeeEEee
Q psy1045 95 ETSALEMPDHENTFVLKG 112 (113)
Q Consensus 95 ~tt~LEMPD~~nTFVLKv 112 (113)
.-|-+++.|+|.|..
T Consensus 82 ---~~~~~kk~~~F~I~t 96 (263)
T 3a8p_A 82 ---VPEHPKKEHVFCLSN 96 (263)
T ss_dssp ---CTTCSSCSSEEEEEC
T ss_pred ---CCcCCCCCCEEEEEc
Confidence 122334578887753
No 42
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=48.75 E-value=51 Score=25.74 Aligned_cols=51 Identities=16% Similarity=0.255 Sum_probs=36.8
Q ss_pred eeeEeeeeeeeccCCCCCcccccceeeeEEEecCCeeeEEecCCCCCCCccccccccee
Q psy1045 33 ECRKEGIVNYLVGENTDGTQKWEKCRLALVKTVGGYMLEFYSPPKSLKPKKGVFCFLIT 91 (113)
Q Consensus 33 e~~rEG~l~yl~~~~~~~~~~WqkcRL~Lrk~~~g~~LEfy~PPKsskPK~~i~Cs~I~ 91 (113)
...++|.|.--.. .-..|++--.+|. +..|..|.-++..+|+-.|+...+.
T Consensus 212 ~~~k~G~L~K~g~----~~k~WkkRwFVL~----~~~L~Yyk~~~~~~p~G~I~L~~~~ 262 (347)
T 2r09_A 212 NPDREGWLLKLGG----RVKTWKRRWFILT----DNCLYYFEYTTDKEPRGIIPLENLS 262 (347)
T ss_dssp CCCEEEEEEEECS----SSCCEEEEEEEEE----TTEEEEESSTTCSSCSEEEECTTCE
T ss_pred ccccCCeeEecCC----CcccceeEEEEEc----CCEEEEEcCCCccCCcEEEEcCCeE
Confidence 4578888854332 2467987767775 3579999999989999888876664
No 43
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=46.77 E-value=63 Score=21.70 Aligned_cols=50 Identities=14% Similarity=0.005 Sum_probs=36.3
Q ss_pred eeeEeeeeeeeccCCCCCcccccceeeeEEEecCCeeeEEecCCCCCCCccccccccee
Q psy1045 33 ECRKEGIVNYLVGENTDGTQKWEKCRLALVKTVGGYMLEFYSPPKSLKPKKGVFCFLIT 91 (113)
Q Consensus 33 e~~rEG~l~yl~~~~~~~~~~WqkcRL~Lrk~~~g~~LEfy~PPKsskPK~~i~Cs~I~ 91 (113)
.+.+||.|.--. .-..|++.=.+|+ +..|-+|--++..+|+-.|+....+
T Consensus 7 ~v~k~GwL~K~g-----~~k~WkrRWfVLk----~~~L~yyk~~~~~~p~G~I~L~~~~ 56 (130)
T 1v88_A 7 GIVMADWLKIRG-----TLKSWTKLWCVLK----PGVLLIYKTQKNGQWVGTVLLNACE 56 (130)
T ss_dssp SCCEEEEEEECC-----SSSSCEEEEEEEE----TTEEEEESCSSSCCCCEEEECSSCE
T ss_pred ceEEEeEEEEeC-----CCCCceEEEEEEE----CCEEEEECCCCCCCceEEEEcCCCE
Confidence 356888886522 3457988777886 3678899989988998888765543
No 44
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=45.23 E-value=75 Score=22.12 Aligned_cols=55 Identities=22% Similarity=0.172 Sum_probs=40.0
Q ss_pred hheeeEeeeeeeeccCCCCCcccccceeeeEEEecCCeeeEEecCCCCCCCcccccccceeeh
Q psy1045 31 VVECRKEGIVNYLVGENTDGTQKWEKCRLALVKTVGGYMLEFYSPPKSLKPKKGVFCFLITEA 93 (113)
Q Consensus 31 ~~e~~rEG~l~yl~~~~~~~~~~WqkcRL~Lrk~~~g~~LEfy~PPKsskPK~~i~Cs~I~EV 93 (113)
...+.+||.|.--.. .-..|++.=.+|+ |..|-+|.-++..+|+-.|+......+
T Consensus 15 ~~pv~keG~L~Kkg~----~~k~WkrRWFvLk----~~~L~Yyk~~~d~~~~g~I~L~~~~~~ 69 (149)
T 1x1f_A 15 ALPLYFEGFLLIKRS----GYREYEHYWTELR----GTTLFFYTDKKSIIYVDKLDIVDLTCL 69 (149)
T ss_dssp SSCEEEEEEEEEECT----TCCSCEEEEEEEE----TTEEEEESCSSCSSCSEECCCSSCCEE
T ss_pred CCCccEEEEEEEeCC----CCCCceeEEEEEc----CCEEEEEeCCCccccCcEEECCCceEE
Confidence 445899999975543 3468988777776 357888999998888877776665433
No 45
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=43.70 E-value=65 Score=20.92 Aligned_cols=73 Identities=14% Similarity=0.166 Sum_probs=42.2
Q ss_pred eeeEeeeeeeeccCCCCCcccccceeeeEEEecCCeeeEEecCCCCCCCcccc----cccceeehhccCCccCC---CCC
Q psy1045 33 ECRKEGIVNYLVGENTDGTQKWEKCRLALVKTVGGYMLEFYSPPKSLKPKKGV----FCFLITEARETSALEMP---DHE 105 (113)
Q Consensus 33 e~~rEG~l~yl~~~~~~~~~~WqkcRL~Lrk~~~g~~LEfy~PPKsskPK~~i----~Cs~I~EVR~tt~LEMP---D~~ 105 (113)
.+.+||.|.--.. .-..|++--.+|.+ +..|..|.-++..+|+=.| .|..|..--+|....-| .+.
T Consensus 7 ~v~~~G~L~K~g~----~~k~WkkRwFVL~~---~~~L~Yyk~~~~~~~~g~i~l~~~~~~i~~~~~~~~v~~~~~~~~~ 79 (130)
T 2d9v_A 7 GLVRGGWLWRQSS----ILRRWKRNWFALWL---DGTLGYYHDETAQDEEDRVVIHFNVRDIKVGQECQDVQPPEGRSRD 79 (130)
T ss_dssp CEEEEEEEEEECS----SSCCEEEEEEEEET---TTEEEEESSSSTTSEEEEEECTTTEEEEEEGGGCSSCCCCSSCCTT
T ss_pred ceeEEEEEEeecC----ccCCceeeEEEEcc---CCEEEEEeCCCCCCcCceEecccceeEEeccccccccCCCCCCCcC
Confidence 4668998874432 23589888788853 4578899888776665444 33333221123223323 335
Q ss_pred CeeEEee
Q psy1045 106 NTFVLKG 112 (113)
Q Consensus 106 nTFVLKv 112 (113)
|.|.|..
T Consensus 80 ~~F~I~~ 86 (130)
T 2d9v_A 80 GLLTVNL 86 (130)
T ss_dssp TEEEEEE
T ss_pred cEEEEEe
Confidence 7777653
No 46
>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}
Probab=42.14 E-value=14 Score=27.92 Aligned_cols=32 Identities=13% Similarity=0.342 Sum_probs=23.1
Q ss_pred eeeEEEecCCeeeEEecCCCCCCCccccccccee
Q psy1045 58 RLALVKTVGGYMLEFYSPPKSLKPKKGVFCFLIT 91 (113)
Q Consensus 58 RL~Lrk~~~g~~LEfy~PPKsskPK~~i~Cs~I~ 91 (113)
+.+..+...|++||+|++|-..+|. +|--.|+
T Consensus 292 ~~l~~~Dp~G~llqi~t~~~~~~~~--~f~e~i~ 323 (357)
T 2r5v_A 292 NVLADEDHGGQLFQIFTASTHPRHT--IFFEVIE 323 (357)
T ss_dssp TCEEEEETTEEEEEEEBCCCSTTSC--CEEEEEE
T ss_pred CeEEecCCCceEEEEEccCCCCCCe--EEEEEEE
Confidence 4566666789999999999887874 4444443
No 47
>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*
Probab=41.88 E-value=22 Score=21.54 Aligned_cols=22 Identities=9% Similarity=0.140 Sum_probs=17.7
Q ss_pred eeeeEEEecCCeeeEEecCCCC
Q psy1045 57 CRLALVKTVGGYMLEFYSPPKS 78 (113)
Q Consensus 57 cRL~Lrk~~~g~~LEfy~PPKs 78 (113)
.+.+..+...|+.+||+.||++
T Consensus 112 ~~~~~~~DPdG~~iel~~~~~~ 133 (133)
T 3ey7_A 112 ITSFYFRDPDGNLIEVSTYSNT 133 (133)
T ss_dssp EEEEEEECTTCCEEEEEESCC-
T ss_pred eEEEEEECCCCCEEEEEecCCC
Confidence 3677777788999999999874
No 48
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=38.65 E-value=72 Score=20.00 Aligned_cols=65 Identities=9% Similarity=0.156 Sum_probs=37.1
Q ss_pred eeeEeeeeeeeccCCCCCcccccceeeeEEEecCCeeeEEecCCCCCCCcccccccceeehhccCCccCCCCCCeeEEe
Q psy1045 33 ECRKEGIVNYLVGENTDGTQKWEKCRLALVKTVGGYMLEFYSPPKSLKPKKGVFCFLITEARETSALEMPDHENTFVLK 111 (113)
Q Consensus 33 e~~rEG~l~yl~~~~~~~~~~WqkcRL~Lrk~~~g~~LEfy~PPKsskPK~~i~Cs~I~EVR~tt~LEMPD~~nTFVLK 111 (113)
...+||.|.--... ....|++.=.+|+ +..|..|.-++. +|.-++...... |+ ..|+..+.|.|.
T Consensus 9 ~~~~~G~L~K~~~~---~~k~WkkR~fvL~----~~~L~yyk~~~~-~~~~~i~l~~~~-v~-----~~~~~~~~F~I~ 73 (114)
T 2da0_A 9 GSEKKGYLLKKSDG---IRKVWQRRKCSVK----NGILTISHATSN-RQPAKLNLLTCQ-VK-----PNAEDKKSFDLI 73 (114)
T ss_dssp CSCEEEEEEEECSS---SCCCEEEEEEEEE----TTEEEECCSSCC-SCCEEEETTTSE-EE-----ECSSSSSCEEEE
T ss_pred CccEEEEEEEeCCC---CCCCceeEEEEEe----CCEEEEEcCCCC-CCCCEEEeeeeE-EE-----ECCCCCCEEEEE
Confidence 45689988765432 2368988767773 346777877554 454444322111 22 335566777664
No 49
>1p8b_A PEA albumin 1, subunit B; inhibitor cystine-knot, plant protein; NMR {Pisum sativum} SCOP: g.3.6.4
Probab=36.47 E-value=12 Score=22.37 Aligned_cols=15 Identities=33% Similarity=0.468 Sum_probs=11.6
Q ss_pred cccceeehhccCCccCCCCC
Q psy1045 86 FCFLITEARETSALEMPDHE 105 (113)
Q Consensus 86 ~Cs~I~EVR~tt~LEMPD~~ 105 (113)
.|+.+ |.|.|||-..
T Consensus 2 ~C~gv-----CSPFemPPC~ 16 (37)
T 1p8b_A 2 SCNGV-----CSPFEMPPCG 16 (37)
T ss_dssp CCEEE-----ECTTCSSGGG
T ss_pred ccccc-----ccCcccCCCC
Confidence 57765 8999999764
No 50
>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus}
Probab=35.96 E-value=23 Score=27.82 Aligned_cols=59 Identities=20% Similarity=0.244 Sum_probs=41.4
Q ss_pred eeEeeeeeeeccCCCCCcccccceeeeEEEecC--C-eeeEEe-cCCC---CCCCcccccccceeehhccCC
Q psy1045 34 CRKEGIVNYLVGENTDGTQKWEKCRLALVKTVG--G-YMLEFY-SPPK---SLKPKKGVFCFLITEARETSA 98 (113)
Q Consensus 34 ~~rEG~l~yl~~~~~~~~~~WqkcRL~Lrk~~~--g-~~LEfy-~PPK---sskPK~~i~Cs~I~EVR~tt~ 98 (113)
++.||.+++-.. ..|+++=++|||.+. + ..|++| +-.. ..++|.++..-.|.-+=....
T Consensus 9 ~v~eg~vk~r~~------KkWk~rw~vlrk~s~~adcl~L~vYkd~~dr~k~~~~KaslsL~~~~GlE~g~~ 74 (224)
T 3ml4_A 9 ALVEGQVKLRDG------KKWKSRWLVLRKPSPVADCLLMLVYKDKCERSKGLRERSSLTLEDICGLEPALP 74 (224)
T ss_dssp CSEEEEEEEC---------CCEEEEEEEECSSTTSSCEEEEEESSSHHHHSCCCCSEEEEECCEEEEEEEEE
T ss_pred eeEEEeeeeecC------CceeeEEEEEEcCCCchheEEEEEEcChhhhhcCCcccceeehHHhcCcccccc
Confidence 567888887754 389999999999754 3 799999 4443 477888888777766554433
No 51
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=34.24 E-value=33 Score=24.03 Aligned_cols=60 Identities=17% Similarity=0.128 Sum_probs=40.8
Q ss_pred eeeEeeeeeeeccCC-CCCcccccceeeeEEEecCCeeeEEecC----CCCCCCcccccccceeehhcc
Q psy1045 33 ECRKEGIVNYLVGEN-TDGTQKWEKCRLALVKTVGGYMLEFYSP----PKSLKPKKGVFCFLITEARET 96 (113)
Q Consensus 33 e~~rEG~l~yl~~~~-~~~~~~WqkcRL~Lrk~~~g~~LEfy~P----PKsskPK~~i~Cs~I~EVR~t 96 (113)
++++||.|.=-.... ..+...|++==.+|+. ..|..|.. ++..+|+=.|+...+..|...
T Consensus 2 ~vikeG~L~Kr~~~~~~~~~k~WKkRwFVL~~----~~L~Yyk~~~~~~~~~~~~G~I~L~~~~~ve~~ 66 (169)
T 1btk_A 2 AVILESIFLKRSQQKKKTSPLNFKKCLFLLTV----HKLSYYEYDFERGRRGSKKGSIDVEKITCVETV 66 (169)
T ss_dssp CCCEEEEEEEECCCSSTTCCCCEEEEEEEECS----SEEEEEEEETTTTEEEEEEEEEEGGGEEEEEEC
T ss_pred ceEEEEEEEEecCCCCCcccCCCceEEEEEcC----CEEEEEecCCccCCCCceeeEEECcceEEEEec
Confidence 567899886432211 1123569877777753 57889986 577899999999987765444
No 52
>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A
Probab=32.87 E-value=33 Score=20.83 Aligned_cols=25 Identities=20% Similarity=0.325 Sum_probs=16.9
Q ss_pred ccceeeeEEEecCCeeeEEecCCCC
Q psy1045 54 WEKCRLALVKTVGGYMLEFYSPPKS 78 (113)
Q Consensus 54 WqkcRL~Lrk~~~g~~LEfy~PPKs 78 (113)
|...+.+..+...|+.+||+.++..
T Consensus 105 ~g~~~~~~~~DPdG~~iel~~~~~~ 129 (135)
T 1f9z_A 105 GGTTVIAFVEDPDGYKIELIEEKDA 129 (135)
T ss_dssp TSCCEEEEEECTTSCEEEEEEC---
T ss_pred CCceeEEEEECCCCCEEEEEecCCC
Confidence 5545666667788999999998753
No 53
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=29.96 E-value=92 Score=18.63 Aligned_cols=24 Identities=17% Similarity=0.455 Sum_probs=17.6
Q ss_pred CcccccceeeeEEEecCCeeeEEecCCC
Q psy1045 50 GTQKWEKCRLALVKTVGGYMLEFYSPPK 77 (113)
Q Consensus 50 ~~~~WqkcRL~Lrk~~~g~~LEfy~PPK 77 (113)
....|++.=.+|+ |..|-+|..++
T Consensus 19 ~~~~Wk~rwfvL~----~~~L~yyk~~~ 42 (106)
T 1btn_A 19 SSRSWHNVYCVIN----NQEMGFYKDAK 42 (106)
T ss_dssp SCCCCEEEEEEEE----TTEEEEESSHH
T ss_pred CCCChhEEEEEEE----CCEEEEEeCCc
Confidence 4568988888886 35788887766
No 54
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=29.91 E-value=1.2e+02 Score=20.13 Aligned_cols=44 Identities=14% Similarity=0.172 Sum_probs=33.8
Q ss_pred cccceeeeEEEecCCeeeEEecCCC---CCCCcccccccceeehhccCCcc
Q psy1045 53 KWEKCRLALVKTVGGYMLEFYSPPK---SLKPKKGVFCFLITEARETSALE 100 (113)
Q Consensus 53 ~WqkcRL~Lrk~~~g~~LEfy~PPK---sskPK~~i~Cs~I~EVR~tt~LE 100 (113)
.|+++-.+|. +..|-+|+-+. +++|+..|..+.+..|+..+.-|
T Consensus 19 ~Wkkr~~vL~----~~kL~~y~~~~~~~~~~p~~~Idl~~~~~V~~V~~~d 65 (117)
T 2rov_A 19 GWVKKYVIVS----SKKILFYDSEQDKEQSNPYMVLDIDKLFHVRPVTQTD 65 (117)
T ss_dssp CCCEEEEEEE----TTEEEEESCHHHHHTTCCSEEECGGGEEEEEECCTTT
T ss_pred CcEEEEEEEE----CCEEEEEECCCCcccCCceEEEECcccEEEEEccccc
Confidence 6999888886 35677888543 56899999998888888776643
No 55
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=29.80 E-value=35 Score=21.67 Aligned_cols=20 Identities=20% Similarity=0.167 Sum_probs=12.8
Q ss_pred eEEEecCCeeeEEecCCCCC
Q psy1045 60 ALVKTVGGYMLEFYSPPKSL 79 (113)
Q Consensus 60 ~Lrk~~~g~~LEfy~PPKss 79 (113)
+..+...|+.+||+..|+++
T Consensus 105 ~~~~DPdGn~iel~~~~~~~ 124 (128)
T 3g12_A 105 AIVLDPDGHSIELCELEGHH 124 (128)
T ss_dssp EEEECTTCCEEEEEC-----
T ss_pred EEEECCCCCEEEEEEecccc
Confidence 66676889999999999976
No 56
>1ju8_A Leginsulin, albumin 1; T-knot, hormone/growth factor complex; NMR {Synthetic} SCOP: g.3.6.4
Probab=29.64 E-value=22 Score=21.15 Aligned_cols=16 Identities=25% Similarity=0.310 Sum_probs=12.0
Q ss_pred cccceeehhccCCccCCCCCC
Q psy1045 86 FCFLITEARETSALEMPDHEN 106 (113)
Q Consensus 86 ~Cs~I~EVR~tt~LEMPD~~n 106 (113)
.|+.+ |.|.|||-...
T Consensus 2 ~C~gv-----CSPFemPPC~s 17 (37)
T 1ju8_A 2 DCNGA-----CSPFEVPPCRS 17 (37)
T ss_dssp CSCSE-----ECSSSSSSSSC
T ss_pred ccccc-----cCCcccCCCCC
Confidence 46664 89999997743
No 57
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=27.57 E-value=1e+02 Score=18.49 Aligned_cols=51 Identities=12% Similarity=0.141 Sum_probs=31.2
Q ss_pred cccccceeeeEEEecCCeeeEEecCCCC--CCCcccccccceeehhccCCccCCCCCCeeEEe
Q psy1045 51 TQKWEKCRLALVKTVGGYMLEFYSPPKS--LKPKKGVFCFLITEARETSALEMPDHENTFVLK 111 (113)
Q Consensus 51 ~~~WqkcRL~Lrk~~~g~~LEfy~PPKs--skPK~~i~Cs~I~EVR~tt~LEMPD~~nTFVLK 111 (113)
...|++-=.+|. +..|..|..++. .+|+-.|+.. .++--+.|+..+.|.|.
T Consensus 12 ~k~Wk~R~fvL~----~~~L~Yy~~~~~~~~~~~g~i~L~------~~~v~~~~~~~~~F~i~ 64 (103)
T 3rcp_A 12 LTGWQPRWFVLD----NGILSYYDSQDDVCKGSKGSIKMA------VCEIKVHSADNTRMELI 64 (103)
T ss_dssp TTCEEEEEEEEE----TTEEEEESSCC---CCCSCEEEGG------GCEEECCTTCSSEEEEE
T ss_pred CCCeeceEEEEE----CCEEEEEecCCcccCCcccEEEee------eeEEEEcCCCCceEEEE
Confidence 357987666665 467888988874 4577666553 22222345567777764
No 58
>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A
Probab=27.51 E-value=26 Score=21.67 Aligned_cols=21 Identities=29% Similarity=0.551 Sum_probs=15.5
Q ss_pred eeeEE--EecCCeeeEEecCCCC
Q psy1045 58 RLALV--KTVGGYMLEFYSPPKS 78 (113)
Q Consensus 58 RL~Lr--k~~~g~~LEfy~PPKs 78 (113)
|.... +...|+.+||+.+||.
T Consensus 126 ~~~~~~~~DPdG~~iel~~~~~~ 148 (148)
T 1jc4_A 126 RINFMHPKSGKGVLIELTQYPKN 148 (148)
T ss_dssp EEEEBCGGGGTTSCEEEEECCC-
T ss_pred EEEEEeecCCCcEEEEEEecCCC
Confidence 44444 5678999999999874
No 59
>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}
Probab=26.34 E-value=40 Score=22.02 Aligned_cols=22 Identities=9% Similarity=0.182 Sum_probs=16.7
Q ss_pred eeeEEEecCCeeeEEecCCCCC
Q psy1045 58 RLALVKTVGGYMLEFYSPPKSL 79 (113)
Q Consensus 58 RL~Lrk~~~g~~LEfy~PPKss 79 (113)
|.+..+...|+.+||+.|+..|
T Consensus 127 ~~~~~~DPdG~~iel~~~~~~~ 148 (148)
T 2r6u_A 127 FAAYFTDSEGNVVGLWETARGS 148 (148)
T ss_dssp EEEEEECTTSCEEEEEEECC--
T ss_pred EEEEEECCCCCEEEEEecCCCC
Confidence 7777777889999999987543
No 60
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=26.20 E-value=14 Score=30.39 Aligned_cols=15 Identities=60% Similarity=0.873 Sum_probs=13.7
Q ss_pred Chhhhhhhccccccc
Q psy1045 1 MAIAMALCGGIGRIK 15 (113)
Q Consensus 1 ~~~~~~~~~~~~~~~ 15 (113)
||||||-.||+|-|-
T Consensus 58 lA~Ava~aGGlGvi~ 72 (400)
T 3ffs_A 58 MAVGMARLGGIGIIH 72 (400)
T ss_dssp HHHHHHTTTCEEEEC
T ss_pred HHHHHHHCCCEEEeC
Confidence 689999999999885
No 61
>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}
Probab=25.72 E-value=41 Score=22.06 Aligned_cols=30 Identities=17% Similarity=0.227 Sum_probs=16.9
Q ss_pred eeeEEEecCCeeeEEecCCCCCCCcccccccc
Q psy1045 58 RLALVKTVGGYMLEFYSPPKSLKPKKGVFCFL 89 (113)
Q Consensus 58 RL~Lrk~~~g~~LEfy~PPKsskPK~~i~Cs~ 89 (113)
|.+..+...|+.+||+.+++..-+ +-.|++
T Consensus 101 ~~~~~~DPdG~~iel~~~~~~~a~--~~~~~~ 130 (144)
T 3r6a_A 101 RNMTVRHSDGSVIEYVEHSKIEAE--NLYFQS 130 (144)
T ss_dssp EEEEEECTTSCEEEEEEECC------------
T ss_pred eEEEEECCCCCEEEEEEcCCcchh--hhhhhc
Confidence 666677788999999999875443 344544
No 62
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=25.69 E-value=78 Score=25.24 Aligned_cols=69 Identities=10% Similarity=0.103 Sum_probs=40.2
Q ss_pred eeEeeeeeeeccCCCCCcccccceeeeEEEecCCeeeEEecCCCCCCCcccccccceeehhccCCccCCCCCCeeEEe
Q psy1045 34 CRKEGIVNYLVGENTDGTQKWEKCRLALVKTVGGYMLEFYSPPKSLKPKKGVFCFLITEARETSALEMPDHENTFVLK 111 (113)
Q Consensus 34 ~~rEG~l~yl~~~~~~~~~~WqkcRL~Lrk~~~g~~LEfy~PPKsskPK~~i~Cs~I~EVR~tt~LEMPD~~nTFVLK 111 (113)
..+||.|.--+. ...+|.+--.+|.. .+..|..|.-++..+|+=.|....+..+.. -+-..+.|.|-|.
T Consensus 146 ~~keG~L~KrG~----~~k~WkrRwFVL~~--~~~~L~Yy~~~~~~~p~g~I~L~~~~~~~~---~~~~~~~~~f~I~ 214 (386)
T 3lju_X 146 GYREGFLWKRGR----DNGQFLSRKFVLTE--REGALKYFNRNDAKEPKAVMKIEHLNATFQ---PAKIGHPHGLQVT 214 (386)
T ss_dssp SEEEEEEEEECS----SSCCEEEEEEEEET--TTTEEEEEC-----CCSEEEEGGGEEEEEC---HHHHTSTTCEEEE
T ss_pred cccccceeeecc----ccCCceEEEEEEEc--CCCEEEEECCCCccCcccEEEeeccEEEEc---ccccCCCceEEEE
Confidence 446666654433 24679887778853 246788999999999999998887655541 1122355666543
No 63
>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A
Probab=24.96 E-value=53 Score=20.81 Aligned_cols=25 Identities=8% Similarity=0.088 Sum_probs=16.2
Q ss_pred eeeeEEEecCCeeeEEecCCCCCCC
Q psy1045 57 CRLALVKTVGGYMLEFYSPPKSLKP 81 (113)
Q Consensus 57 cRL~Lrk~~~g~~LEfy~PPKsskP 81 (113)
.|.+..+...|+.+||+...+.+-|
T Consensus 125 ~~~~~~~DPdG~~iEl~~~~~~~~~ 149 (152)
T 3huh_A 125 IMSIYIRDPDGNLIEISQYVEGHHH 149 (152)
T ss_dssp EEEEEEECTTCCEEEEEEC------
T ss_pred EEEEEEECCCCCEEEEEecccCccc
Confidence 4777778888999999988776654
No 64
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=24.43 E-value=1.3e+02 Score=19.99 Aligned_cols=48 Identities=19% Similarity=0.187 Sum_probs=31.3
Q ss_pred eeEeeeeeeeccCCCCCcccccceeeeEEEecCCeeeEEecCC--CCCCCccccccc
Q psy1045 34 CRKEGIVNYLVGENTDGTQKWEKCRLALVKTVGGYMLEFYSPP--KSLKPKKGVFCF 88 (113)
Q Consensus 34 ~~rEG~l~yl~~~~~~~~~~WqkcRL~Lrk~~~g~~LEfy~PP--KsskPK~~i~Cs 88 (113)
+++||.|.--.. ....|++.=.+|+. +++.+|-+.. +...|.-+|+..
T Consensus 6 ~~k~G~L~Kk~~----~~k~W~~rwfVL~~---~~L~yyK~~~~~~d~~P~gsI~L~ 55 (120)
T 4a6h_A 6 EIKSGFLERRSK----FLKSYSKGYYVLTP---NFLHEFKTADRKKDLVPVMSLALS 55 (120)
T ss_dssp CSEEEEEEEEET----TTTEEEEEEEEECS---SEEEEESSCCTTTCCSCSEEEEGG
T ss_pred ccEEEEEEEcCC----CCCCCccEEEEEeC---CEEEEEcCCCcCcCCCceEEEECC
Confidence 568887763332 24589888778853 4666666654 456788888764
No 65
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=24.15 E-value=1.1e+02 Score=24.03 Aligned_cols=44 Identities=30% Similarity=0.475 Sum_probs=26.9
Q ss_pred hheeeEeeeeee---eccC-C----CCCcccccceeeeEEEecCCeeeEEecCCCC
Q psy1045 31 VVECRKEGIVNY---LVGE-N----TDGTQKWEKCRLALVKTVGGYMLEFYSPPKS 78 (113)
Q Consensus 31 ~~e~~rEG~l~y---l~~~-~----~~~~~~WqkcRL~Lrk~~~g~~LEfy~PPKs 78 (113)
...+.+||.|+. +... + ..+...|+++-.+|+ |-.|-||-..+.
T Consensus 8 ~~~v~k~G~L~rK~~l~~~k~~K~~~~~~r~Wkk~w~VLk----g~~L~fYKde~~ 59 (279)
T 3a8n_A 8 QGTVRKAGALAVKNFLVHKKNKKVESATRRKWKHYWVSLK----GCTLFFYETDGR 59 (279)
T ss_dssp --CCSCEEEEEEEEEEEEETTTEEECCCCCCCEEEEEEEE----TTEECCBCCC--
T ss_pred CCceeEEEEEEEEEEecccCCcccCCccCCCCeEEEEEEe----CCEEEEEecccc
Confidence 455779999973 3221 1 124578999988886 456778877663
No 66
>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*
Probab=22.39 E-value=60 Score=20.18 Aligned_cols=18 Identities=17% Similarity=0.268 Sum_probs=14.5
Q ss_pred eeeEEEecCCeeeEEecC
Q psy1045 58 RLALVKTVGGYMLEFYSP 75 (113)
Q Consensus 58 RL~Lrk~~~g~~LEfy~P 75 (113)
|.+..+...|+.+||+.|
T Consensus 114 ~~~~~~DPdGn~iel~~~ 131 (132)
T 3sk2_A 114 RTFLISDPDGHIIRVCPL 131 (132)
T ss_dssp EEEEEECTTCCEEEEEEC
T ss_pred EEEEEECCCCCEEEEEeC
Confidence 666677778999999976
No 67
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=21.76 E-value=80 Score=19.47 Aligned_cols=64 Identities=17% Similarity=0.232 Sum_probs=34.8
Q ss_pred eeEeeeeeeeccCCCCCcccccceeeeEEEecCCeeeEEecCCCC-CCCcccccccceeehhccCCccCCCCCCeeEEe
Q psy1045 34 CRKEGIVNYLVGENTDGTQKWEKCRLALVKTVGGYMLEFYSPPKS-LKPKKGVFCFLITEARETSALEMPDHENTFVLK 111 (113)
Q Consensus 34 ~~rEG~l~yl~~~~~~~~~~WqkcRL~Lrk~~~g~~LEfy~PPKs-skPK~~i~Cs~I~EVR~tt~LEMPD~~nTFVLK 111 (113)
+.+||.|.-. ....|++-=.+|+. -.|.+|.-++. .+|...|..... +|... +-+++.|+|.|.
T Consensus 8 ~~~~G~L~K~------~~k~Wk~RwfvL~~----~~L~yyk~~~~~~~~~~~i~l~~~-~v~~~---~~~~~~~~F~i~ 72 (107)
T 2cof_A 8 LETSSYLNVL------VNSQWKSRWCSVRD----NHLHFYQDRNRSKVAQQPLSLVGC-EVVPD---PSPDHLYSFRIL 72 (107)
T ss_dssp CTTCCEEEEE------ETTEEEEEEEEECS----SCEEEECSSTTCSEEEEEECTTTC-EEECC---CBTTBSCEEEEE
T ss_pred CcEeEEEEEe------cCCCcceEEEEEEC----CEEEEEeCCcccCCCeeEEeccce-EEEEC---CCCCCCeEEEEE
Confidence 4577877754 35689776666643 37788876653 455555543321 12111 113446777664
No 68
>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A
Probab=20.87 E-value=96 Score=18.83 Aligned_cols=24 Identities=8% Similarity=0.030 Sum_probs=18.0
Q ss_pred eeeeEEEecCCeeeEEecCCCCCC
Q psy1045 57 CRLALVKTVGGYMLEFYSPPKSLK 80 (113)
Q Consensus 57 cRL~Lrk~~~g~~LEfy~PPKssk 80 (113)
.|.+..+...|+.+||+.++-..+
T Consensus 104 ~~~~~~~DPdG~~iel~~~~~~~~ 127 (133)
T 2p7o_A 104 GRSIYFYDFDNHLFELHAGTLEER 127 (133)
T ss_dssp CCEEEEECSSSCEEEEECSSCCCC
T ss_pred eeEEEEECCCCCEEEEEcCChHHH
Confidence 355666777899999999876443
No 69
>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}
Probab=20.68 E-value=55 Score=21.39 Aligned_cols=26 Identities=4% Similarity=-0.102 Sum_probs=16.5
Q ss_pred eeeEEEecCCeeeEEecCCCCCCCcc
Q psy1045 58 RLALVKTVGGYMLEFYSPPKSLKPKK 83 (113)
Q Consensus 58 RL~Lrk~~~g~~LEfy~PPKsskPK~ 83 (113)
|.+..+...|+.+||+.|+++..=++
T Consensus 106 ~~~~~~DPdG~~iel~~~~~~a~~~~ 131 (148)
T 3rhe_A 106 YTFVGVDPDEHRLRIFCLKRTAENLY 131 (148)
T ss_dssp EEEEEECTTCCEEEEEEEC-------
T ss_pred cEEEEECCCCCEEEEEEcChhHhhhh
Confidence 76777778899999999988765444
Done!