RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy10450
         (111 letters)



>d1azsb_ d.58.29.1 (B:) Adenylyl cyclase IIC1, domain C2a {Rat
           (Rattus norvegicus) [TaxId: 10116]}
          Length = 199

 Score = 34.9 bits (79), Expect = 9e-04
 Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 11/86 (12%)

Query: 12  DKVFKSFKFLTLKVSPFPLPSQVETIGDAYMVVSGLPERNGDNHAREISR---------- 61
           +++   F  L  K   F    +++TIG  YM  +GL       HA+E  R          
Sbjct: 38  NEIIADFDDLLSKP-KFSGVEKIKTIGSTYMAATGLSAIPSQEHAQEPERQYMHIGTMVE 96

Query: 62  MALAILEAVQSFSIQHKPDAQLKSGM 87
            A A++  + + +     D +L+ G+
Sbjct: 97  FAYALVGKLDAINKHSFNDFKLRVGI 122


>d1ej8a_ b.1.8.1 (A:) Copper chaperone for superoxide dismutase,
          C-terminal domain {Baker's yeast (Saccharomyces
          cerevisiae) [TaxId: 4932]}
          Length = 140

 Score = 23.0 bits (49), Expect = 7.9
 Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 1/28 (3%)

Query: 63 ALAILEAVQSFSIQHKPDAQLKSGMIEF 90
          A+AILE  Q ++I  K D  ++ G+   
Sbjct: 3  AVAILETFQKYTIDQKKDTAVR-GLARI 29


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.316    0.134    0.373 

Gapped
Lambda     K      H
   0.267   0.0559    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 389,719
Number of extensions: 15387
Number of successful extensions: 25
Number of sequences better than 10.0: 1
Number of HSP's gapped: 25
Number of HSP's successfully gapped: 6
Length of query: 111
Length of database: 2,407,596
Length adjustment: 70
Effective length of query: 41
Effective length of database: 1,446,496
Effective search space: 59306336
Effective search space used: 59306336
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 47 (22.3 bits)