BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10453
(184 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4DIL|A Chain A, Flavo Di-Iron Protein H90n Mutant From Thermotoga Maritima
pdb|4DIL|B Chain B, Flavo Di-Iron Protein H90n Mutant From Thermotoga Maritima
Length = 410
Score = 29.6 bits (65), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 48 GDPETEKPTSLLGLLWNKVEDTLSVSIESLKEMQYQK-VYQATSSTRSAPGGIRETKKAV 106
GDP+ K T + ++ VE+ + +I+SLKE + VY+ + R A I E K +
Sbjct: 261 GDPKKGKVTVIYDSMYGFVENVMKKAIDSLKEKGFTPVVYKFSDEERPA---ISEILKDI 317
Query: 107 CDS 109
DS
Sbjct: 318 PDS 320
>pdb|4DIK|A Chain A, Flavo Di-Iron Protein H90a Mutant From Thermotoga Maritima
pdb|4DIK|B Chain B, Flavo Di-Iron Protein H90a Mutant From Thermotoga Maritima
Length = 410
Score = 29.6 bits (65), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 48 GDPETEKPTSLLGLLWNKVEDTLSVSIESLKEMQYQK-VYQATSSTRSAPGGIRETKKAV 106
GDP+ K T + ++ VE+ + +I+SLKE + VY+ + R A I E K +
Sbjct: 261 GDPKKGKVTVIYDSMYGFVENVMKKAIDSLKEKGFTPVVYKFSDEERPA---ISEILKDI 317
Query: 107 CDS 109
DS
Sbjct: 318 PDS 320
>pdb|4EK1|A Chain A, Crystal Structure Of Electron-Spin Labeled Cytochrome
P450cam
pdb|4EK1|B Chain B, Crystal Structure Of Electron-Spin Labeled Cytochrome
P450cam
Length = 414
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 22 EAREFIEVASDVMRERQFDLQGWEITGDPETEKPTSLLGLLWNKVEDTLSVSIESLK 78
EA +FI + D +RQF ++ G P +K L N++++ S IESL+
Sbjct: 94 EAYDFIPTSMDPPEQRQFRALANQVVGMPVVDK-------LENRIQELASSLIESLR 143
>pdb|1W3A|A Chain A, Three Dimensional Structure Of A Novel Pore-Forming Lectin
From The Mushroom Laetiporus Sulphureus
pdb|1W3F|A Chain A, Crystal Structure Of The Hemolytic Lectin From The
Mushroom Laetiporus Sulphureus Complexed With
N-Acetyllactosamine In The Gamma Motif
pdb|1W3G|A Chain A, Hemolytic Lectin From The Mushroom Laetiporus Sulphureus
Complexed With Two N-Acetyllactosamine Molecules
Length = 315
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Query: 79 EMQYQKVYQATSSTRSAPGGIRETKKAVCDSRTGVKKLAIGHAIGDKE 126
E + K Y AT S R+ PG ET KAV +G+ + + K
Sbjct: 243 ENTFSKTYTATFSVRAGPG---ETVKAVSTVDSGIINVPFTAYLSSKS 287
>pdb|2IIR|A Chain A, Acetate Kinase From A Hypothermophile Thermotoga Maritima
pdb|2IIR|B Chain B, Acetate Kinase From A Hypothermophile Thermotoga Maritima
pdb|2IIR|C Chain C, Acetate Kinase From A Hypothermophile Thermotoga Maritima
pdb|2IIR|D Chain D, Acetate Kinase From A Hypothermophile Thermotoga Maritima
pdb|2IIR|E Chain E, Acetate Kinase From A Hypothermophile Thermotoga Maritima
pdb|2IIR|F Chain F, Acetate Kinase From A Hypothermophile Thermotoga Maritima
pdb|2IIR|G Chain G, Acetate Kinase From A Hypothermophile Thermotoga Maritima
pdb|2IIR|H Chain H, Acetate Kinase From A Hypothermophile Thermotoga Maritima
pdb|2IIR|I Chain I, Acetate Kinase From A Hypothermophile Thermotoga Maritima
pdb|2IIR|J Chain J, Acetate Kinase From A Hypothermophile Thermotoga Maritima
Length = 403
Score = 28.1 bits (61), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Query: 101 ETKKAVCDS---RTGVKKLAIGHAIGDKEHIIERE 132
E +K +C R G++ + H +GD++H+IERE
Sbjct: 21 EGEKVLCKGIAERIGIEGSRLVHRVGDEKHVIERE 55
>pdb|1IWK|A Chain A, Putidaredoxin-Binding Stablilizes An Active Conformer Of
Cytochrome P450cam In Its Reduced State; Crystal
Structure Of Mutant(112k) Cytochrome P450cam
Length = 415
Score = 28.1 bits (61), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 22 EAREFIEVASDVMRERQFDLQGWEITGDPETEKPTSLLGLLWNKVEDTLSVSIESLK 78
EA +FI + D +RQF ++ G P +K L N++++ IESL+
Sbjct: 95 EAYDFIPTSMDPPEQRQFKALANQVVGMPVVDK-------LENRIQELACSLIESLR 144
>pdb|3ABO|A Chain A, Crystal Structure Of Ethanolamine Ammonia-Lyase From
Escherichia Coli Complexed With Cn-Cbl And Ethanolamine
pdb|3ABO|C Chain C, Crystal Structure Of Ethanolamine Ammonia-Lyase From
Escherichia Coli Complexed With Cn-Cbl And Ethanolamine
pdb|3ABQ|A Chain A, Crystal Structure Of Ethanolamine Ammonia-Lyase From
Escherichia Coli Complexed With Cn-Cbl And
2-Amino-1-Propanol
pdb|3ABQ|C Chain C, Crystal Structure Of Ethanolamine Ammonia-Lyase From
Escherichia Coli Complexed With Cn-Cbl And
2-Amino-1-Propanol
pdb|3ABR|A Chain A, Crystal Structure Of Ethanolamine Ammonia-Lyase From
Escherichia Coli Complexed With Cn-Cbl (Substrate-Free
Form)
pdb|3ABR|C Chain C, Crystal Structure Of Ethanolamine Ammonia-Lyase From
Escherichia Coli Complexed With Cn-Cbl (Substrate-Free
Form)
pdb|3ABS|A Chain A, Crystal Structure Of Ethanolamine Ammonia-Lyase From
Escheri Complexed With Adeninylpentylcobalamin And
Ethanolamine
pdb|3ABS|C Chain C, Crystal Structure Of Ethanolamine Ammonia-Lyase From
Escheri Complexed With Adeninylpentylcobalamin And
Ethanolamine
pdb|3ANY|A Chain A, Crystal Structure Of Ethanolamine Ammonia-Lyase From
Escherichia Coli Complexed With Cn-Cbl And
(R)-2-Amino-1-Propanol
pdb|3ANY|C Chain C, Crystal Structure Of Ethanolamine Ammonia-Lyase From
Escherichia Coli Complexed With Cn-Cbl And
(R)-2-Amino-1-Propanol
pdb|3AO0|A Chain A, Crystal Structure Of Ethanolamine Ammonia-Lyase From
Escherichia Coli Complexed With Cn-Cbl And
(S)-2-Amino-1-Propanol
pdb|3AO0|C Chain C, Crystal Structure Of Ethanolamine Ammonia-Lyase From
Escherichia Coli Complexed With Cn-Cbl And
(S)-2-Amino-1-Propanol
Length = 453
Score = 28.1 bits (61), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 58/128 (45%), Gaps = 15/128 (11%)
Query: 20 PAEAREFIE-VASDVMRERQFDLQGWEITGDPETEKPTSLLGLLWNKVEDTLSVSIESLK 78
P + R+ ++ +A+ + F + I +P T+ +L ++V DT+ I+
Sbjct: 163 PNDTRDDVQSIAAQIYEGLSFGVGDAVIGVNPVTDDVENL-----SRVLDTIYGVIDKFN 217
Query: 79 EMQYQKVYQATSST------RSAPGGIRETKKAVCDSRTGVKKLAIGHAIGDKEHIIERE 132
+ Q A +T R APGG+ +++C S G+K+ + A+ D+ + E
Sbjct: 218 -IPTQGCVLAHVTTQIEAIRRGAPGGL--IFQSICGSEKGLKEFGVELAMLDEARAVGAE 274
Query: 133 QNLRSGEQ 140
N +GE
Sbjct: 275 FNRIAGEN 282
>pdb|3FWG|A Chain A, Ferric Camphor Bound Cytochrome P450cam, Arg365leu,
Glu366gln, Monoclinic Crystal Form
pdb|3FWG|B Chain B, Ferric Camphor Bound Cytochrome P450cam, Arg365leu,
Glu366gln, Monoclinic Crystal Form
Length = 405
Score = 27.7 bits (60), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 22 EAREFIEVASDVMRERQFDLQGWEITGDPETEKPTSLLGLLWNKVEDTLSVSIESLK 78
EA +FI + D +RQF ++ G P +K L N++++ IESL+
Sbjct: 85 EAYDFIPTSMDPPEQRQFRALANQVVGMPVVDK-------LENRIQELACSLIESLR 134
>pdb|1LWL|A Chain A, Crystal Structure Of Cytochrome P450-Cam With A
Fluorescent Probe D-8-Ad (Adamantane-1-Carboxylic
Acid-5-Dimethylamino-
Naphthalene-1-Sulfonylamino-Octyl-Amide)
pdb|1RF9|A Chain A, Crystal Structure Of Cytochrome P450-Cam With A
Fluorescent Probe D-4-Ad (Adamantane-1-Carboxylic
Acid-5-Dimethylamino-
Naphthalene-1-Sulfonylamino-Butyl-Amide)
Length = 417
Score = 27.7 bits (60), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 22 EAREFIEVASDVMRERQFDLQGWEITGDPETEKPTSLLGLLWNKVEDTLSVSIESLK 78
EA +FI + D +RQF ++ G P +K L N++++ IESL+
Sbjct: 95 EAYDFIPTSMDPPEQRQFRALANQVVGMPVVDK-------LENRIQELACSLIESLR 144
>pdb|2ZUH|A Chain A, Crystal Structure Of Camphor-Soaked Ferric Cytochrome
P450cam Mutant (D297a)
Length = 415
Score = 27.7 bits (60), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 22 EAREFIEVASDVMRERQFDLQGWEITGDPETEKPTSLLGLLWNKVEDTLSVSIESLK 78
EA +FI + D +RQF ++ G P +K L N++++ IESL+
Sbjct: 95 EAYDFIPTSMDPPEQRQFRALANQVVGMPVVDK-------LENRIQELACSLIESLR 144
>pdb|3FWI|A Chain A, Ferric Camphor Bound Cytochrome P450cam Containing A
Selenocysteine As The 5th Heme Ligand, Tetragonal
Crystal Form
pdb|3FWJ|A Chain A, Ferric Camphor Bound Cytochrome P450cam Containing A
Selenocysteine As The 5th Heme Ligand, Orthorombic
Crystal Form
Length = 405
Score = 27.7 bits (60), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 22 EAREFIEVASDVMRERQFDLQGWEITGDPETEKPTSLLGLLWNKVEDTLSVSIESLK 78
EA +FI + D +RQF ++ G P +K L N++++ IESL+
Sbjct: 85 EAYDFIPTSMDPPEQRQFRALANQVVGMPVVDK-------LENRIQELACSLIESLR 134
>pdb|2FE6|A Chain A, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
Length = 421
Score = 27.7 bits (60), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 22 EAREFIEVASDVMRERQFDLQGWEITGDPETEKPTSLLGLLWNKVEDTLSVSIESLK 78
EA +FI + D +RQF ++ G P +K L N++++ IESL+
Sbjct: 95 EAYDFIPTSMDPPEQRQFRALANQVVGMPVVDK-------LENRIQELACSLIESLR 144
>pdb|1GEK|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GEM|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1IWI|A Chain A, Putidaredoxin-Binding Stablilizes An Active Conformer Of
Cytochrome P450cam In Its Reduced State; Crystal
Structure Of Cytochrome P450cam
pdb|2ZAW|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
Reconstituted With 6- Methyl-6-Depropionated Hemin
pdb|2ZAX|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
pdb|2Z97|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
Reconstituted With 7- Methyl-7-Depropionated Hemin
pdb|2ZWT|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
pdb|2ZWU|A Chain A, Crystal Structure Of Camphor Soaked Ferric Cytochrome
P450cam
pdb|2L8M|A Chain A, Reduced And Co-Bound Cytochrome P450cam (Cyp101a1)
Length = 415
Score = 27.7 bits (60), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 22 EAREFIEVASDVMRERQFDLQGWEITGDPETEKPTSLLGLLWNKVEDTLSVSIESLK 78
EA +FI + D +RQF ++ G P +K L N++++ IESL+
Sbjct: 95 EAYDFIPTSMDPPEQRQFRALANQVVGMPVVDK-------LENRIQELACSLIESLR 144
>pdb|1GEB|A Chain A, X-Ray Crystal Structure And Catalytic Properties Of
Thr252ile Mutant Of Cytochrome P450cam
Length = 415
Score = 27.7 bits (60), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 22 EAREFIEVASDVMRERQFDLQGWEITGDPETEKPTSLLGLLWNKVEDTLSVSIESLK 78
EA +FI + D +RQF ++ G P +K L N++++ IESL+
Sbjct: 95 EAYDFIPTSMDPPEQRQFRALANQVVGMPVVDK-------LENRIQELACSLIESLR 144
>pdb|2ZUJ|A Chain A, Crystal Structure Of Camphor-Soaked Ferric Cytochrome
P450cam Mutant(D297l)
Length = 415
Score = 27.7 bits (60), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 22 EAREFIEVASDVMRERQFDLQGWEITGDPETEKPTSLLGLLWNKVEDTLSVSIESLK 78
EA +FI + D +RQF ++ G P +K L N++++ IESL+
Sbjct: 95 EAYDFIPTSMDPPEQRQFRALANQVVGMPVVDK-------LENRIQELACSLIESLR 144
>pdb|2ZUI|A Chain A, Crystal Structure Of Camphor-Soaked Ferric Cytochrome
P450cam Mutant (D297n)
Length = 415
Score = 27.7 bits (60), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 22 EAREFIEVASDVMRERQFDLQGWEITGDPETEKPTSLLGLLWNKVEDTLSVSIESLK 78
EA +FI + D +RQF ++ G P +K L N++++ IESL+
Sbjct: 95 EAYDFIPTSMDPPEQRQFRALANQVVGMPVVDK-------LENRIQELACSLIESLR 144
>pdb|3FWF|A Chain A, Ferric Camphor Bound Cytochrome P450cam Containing A
Selenocysteine As The 5th Heme Ligand, Monoclinic
Crystal Form
pdb|3FWF|B Chain B, Ferric Camphor Bound Cytochrome P450cam Containing A
Selenocysteine As The 5th Heme Ligand, Monoclinic
Crystal Form
Length = 405
Score = 27.7 bits (60), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 22 EAREFIEVASDVMRERQFDLQGWEITGDPETEKPTSLLGLLWNKVEDTLSVSIESLK 78
EA +FI + D +RQF ++ G P +K L N++++ IESL+
Sbjct: 85 EAYDFIPTSMDPPEQRQFRALANQVVGMPVVDK-------LENRIQELACSLIESLR 134
>pdb|2QBN|A Chain A, Crystal Structure Of Ferric G248v Cytochrome P450cam
pdb|2QBO|A Chain A, Crystal Structure Of The P450cam G248v Mutant In The
Cyanide Bound State
Length = 421
Score = 27.7 bits (60), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 22 EAREFIEVASDVMRERQFDLQGWEITGDPETEKPTSLLGLLWNKVEDTLSVSIESLK 78
EA +FI + D +RQF ++ G P +K L N++++ IESL+
Sbjct: 95 EAYDFIPTSMDPPEQRQFRALANQVVGMPVVDK-------LENRIQELACSLIESLR 144
>pdb|1T85|A Chain A, Crystal Structure Of The Ferrous Co-Bound Cytochrome
P450cam Mutant (L358pC334A)
pdb|1T86|A Chain A, Crystal Structure Of The Ferrous Cytochrome P450cam Mutant
(L358pC334A)
pdb|1T86|B Chain B, Crystal Structure Of The Ferrous Cytochrome P450cam Mutant
(L358pC334A)
Length = 414
Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 22 EAREFIEVASDVMRERQFDLQGWEITGDPETEKPTSLLGLLWNKVEDTLSVSIESLK 78
EA +FI + D +RQF ++ G P +K L N++++ IESL+
Sbjct: 94 EAYDFIPTSMDPPEQRQFRALANQVVGMPVVDK-------LENRIQELACSLIESLR 143
>pdb|2QBL|A Chain A, Crystal Structure Of Ferric G248t Cytochrome P450cam
pdb|2QBM|A Chain A, Crystal Structure Of The P450cam G248t Mutant In The
Cyanide Bound State
Length = 421
Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 22 EAREFIEVASDVMRERQFDLQGWEITGDPETEKPTSLLGLLWNKVEDTLSVSIESLK 78
EA +FI + D +RQF ++ G P +K L N++++ IESL+
Sbjct: 95 EAYDFIPTSMDPPEQRQFRALANQVVGMPVVDK-------LENRIQELACSLIESLR 144
>pdb|2A1N|A Chain A, Crystal Structure Of Ferrous Dioxygen Complex Of D251n
Cytochrome P450cam
pdb|2A1N|B Chain B, Crystal Structure Of Ferrous Dioxygen Complex Of D251n
Cytochrome P450cam
Length = 415
Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 22 EAREFIEVASDVMRERQFDLQGWEITGDPETEKPTSLLGLLWNKVEDTLSVSIESLK 78
EA +FI + D +RQF ++ G P +K L N++++ IESL+
Sbjct: 95 EAYDFIPTSMDPPEQRQFRALANQVVGMPVVDK-------LENRIQELACSLIESLR 144
>pdb|2CP4|A Chain A, Crystal Structure Of The Cytochrome P450-Cam Active Site
Mutant Thr252ala
Length = 414
Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 22 EAREFIEVASDVMRERQFDLQGWEITGDPETEKPTSLLGLLWNKVEDTLSVSIESLK 78
EA +FI + D +RQF ++ G P +K L N++++ IESL+
Sbjct: 94 EAYDFIPTSMDPPEQRQFRALANQVVGMPVVDK-------LENRIQELACSLIESLR 143
>pdb|2A1O|A Chain A, Crystal Structure Of Ferrous Dioxygen Complex Of T252a
Cytochrome P450cam
pdb|2A1O|B Chain B, Crystal Structure Of Ferrous Dioxygen Complex Of T252a
Cytochrome P450cam
Length = 415
Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 22 EAREFIEVASDVMRERQFDLQGWEITGDPETEKPTSLLGLLWNKVEDTLSVSIESLK 78
EA +FI + D +RQF ++ G P +K L N++++ IESL+
Sbjct: 95 EAYDFIPTSMDPPEQRQFRALANQVVGMPVVDK-------LENRIQELACSLIESLR 144
>pdb|2LQD|A Chain A, Reduced And Co-Bound Cytochrome P450cam (Cyp101a1)
Length = 405
Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 22 EAREFIEVASDVMRERQFDLQGWEITGDPETEKPTSLLGLLWNKVEDTLSVSIESLK 78
EA +FI + D +RQF ++ G P +K L N++++ IESL+
Sbjct: 85 EAYDFIPTSMDPPEQRQFRALANQVVGMPVVDK-------LENRIQELACSLIESLR 134
>pdb|2FER|A Chain A, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
pdb|2FEU|A Chain A, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
pdb|2FEU|B Chain B, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
Length = 411
Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 22 EAREFIEVASDVMRERQFDLQGWEITGDPETEKPTSLLGLLWNKVEDTLSVSIESLK 78
EA +FI + D +RQF ++ G P +K L N++++ IESL+
Sbjct: 85 EAYDFIPTSMDPPEQRQFRALANQVVGMPVVDK-------LENRIQELACSLIESLR 134
>pdb|6CP4|A Chain A, P450cam D251n Mutant
Length = 414
Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 22 EAREFIEVASDVMRERQFDLQGWEITGDPETEKPTSLLGLLWNKVEDTLSVSIESLK 78
EA +FI + D +RQF ++ G P +K L N++++ IESL+
Sbjct: 94 EAYDFIPTSMDPPEQRQFRALANQVVGMPVVDK-------LENRIQELACSLIESLR 143
>pdb|1DZ8|A Chain A, Oxygen Complex Of P450cam From Pseudomonas Putida
pdb|1DZ8|B Chain B, Oxygen Complex Of P450cam From Pseudomonas Putida
pdb|1DZ6|A Chain A, Ferrous P450cam From Pseudomonas Putida
pdb|1DZ6|B Chain B, Ferrous P450cam From Pseudomonas Putida
pdb|1DZ9|A Chain A, Putative Oxo Complex Of P450cam From Pseudomonas Putida
pdb|1DZ9|B Chain B, Putative Oxo Complex Of P450cam From Pseudomonas Putida
pdb|1DZ4|A Chain A, Ferric P450cam From Pseudomonas Putida
pdb|1DZ4|B Chain B, Ferric P450cam From Pseudomonas Putida
pdb|1O76|A Chain A, Cyanide Complex Of P450cam From Pseudomonas Putida
pdb|1O76|B Chain B, Cyanide Complex Of P450cam From Pseudomonas Putida
pdb|1UYU|A Chain A, Xenon Complex Of Wildtype P450cam From Pseudomonas Putida
pdb|1UYU|B Chain B, Xenon Complex Of Wildtype P450cam From Pseudomonas Putida
pdb|1AKD|A Chain A, Cytochrome P450cam From Pseudomonas Putida, Complexed With
1s-Camphor
Length = 414
Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 22 EAREFIEVASDVMRERQFDLQGWEITGDPETEKPTSLLGLLWNKVEDTLSVSIESLK 78
EA +FI + D +RQF ++ G P +K L N++++ IESL+
Sbjct: 94 EAYDFIPTSMDPPEQRQFRALANQVVGMPVVDK-------LENRIQELACSLIESLR 143
>pdb|2A1M|A Chain A, Crystal Structure Of Ferrous Dioxygen Complex Of Wild-Type
Cytochrome P450cam
pdb|2A1M|B Chain B, Crystal Structure Of Ferrous Dioxygen Complex Of Wild-Type
Cytochrome P450cam
Length = 415
Score = 27.7 bits (60), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 22 EAREFIEVASDVMRERQFDLQGWEITGDPETEKPTSLLGLLWNKVEDTLSVSIESLK 78
EA +FI + D +RQF ++ G P +K L N++++ IESL+
Sbjct: 95 EAYDFIPTSMDPPEQRQFRALANQVVGMPVVDK-------LENRIQELACSLIESLR 144
>pdb|2H7R|A Chain A, L244a Mutant Of Cytochrome P450cam Complexed With
Imidazole
pdb|2H7S|A Chain A, L244a Mutant Of Cytochrome P450cam
pdb|2H7S|C Chain C, L244a Mutant Of Cytochrome P450cam
Length = 414
Score = 27.7 bits (60), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 22 EAREFIEVASDVMRERQFDLQGWEITGDPETEKPTSLLGLLWNKVEDTLSVSIESLK 78
EA +FI + D +RQF ++ G P +K L N++++ IESL+
Sbjct: 94 EAYDFIPTSMDPPEQRQFRALANQVVGMPVVDK-------LENRIQELACSLIESLR 143
>pdb|1P2Y|A Chain A, Crystal Structure Of Cytochrome P450cam In Complex With
(S)- (-)-Nicotine
pdb|1P7R|A Chain A, Crystal Structure Of Reduced, Co-Exposed Complex Of
Cytochrome P450cam With (S)-(-)-Nicotine
Length = 420
Score = 27.7 bits (60), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 22 EAREFIEVASDVMRERQFDLQGWEITGDPETEKPTSLLGLLWNKVEDTLSVSIESLK 78
EA +FI + D +RQF ++ G P +K L N++++ IESL+
Sbjct: 94 EAYDFIPTSMDPPEQRQFRALANQVVGMPVVDK-------LENRIQELACSLIESLR 143
>pdb|1RE9|A Chain A, Crystal Structure Of Cytochrome P450-cam With A
Fluorescent Probe D-8-ad (adamantane-1-carboxylic
Acid-5-dimethylamino-
Naphthalene-1-sulfonylamino-octyl-amide)
pdb|1YRC|A Chain A, X-ray Crystal Structure Of Hydrogenated Cytochrome P450cam
pdb|1YRD|A Chain A, X-Ray Crystal Structure Of Perdeuterated Cytochrome
P450cam
pdb|2H7Q|A Chain A, Cytochrome P450cam Complexed With Imidazole
pdb|1CP4|A Chain A, Formation, Crystal Structure, And Rearrangement Of A
Cytochrome P450-Cam Iron-Phenyl Complex
pdb|1NOO|A Chain A, Cytochrome P450-Cam Complexed With 5-Exo-Hydroxycamphor
pdb|1PHA|A Chain A, Inhibitor-Induced Conformational Change In Cytochrome
P450- Cam
pdb|1PHB|A Chain A, Inhibitor-Induced Conformational Change In Cytochrome
P450- Cam
pdb|1PHC|A Chain A, Crystal Structure Of Substrate-free Pseudomonas Putida
Cytochrome P450
pdb|1PHD|A Chain A, Crystal Structures Of Metyrapone-And
Phenylimidazole-Inhibited Complexes Of Cytochrome
P450-Cam
pdb|1PHE|A Chain A, Crystal Structures Of Metyrapone-And
Phenylimidazole-Inhibited Complexes Of Cytochrome
P450-Cam
pdb|1PHF|A Chain A, Crystal Structures Of Metyrapone-And Phenylimidazole-
Inhibited Complexes Of Cytochrome P450-Cam
pdb|1PHG|A Chain A, Crystal Structures Of Metyrapone-And Phenylimidazole-
Inhibited Complexes Of Cytochrome P450-Cam
pdb|2CPP|A Chain A, High-Resolution Crystal Structure Of Cytochrome P450-Cam
pdb|3CP4|A Chain A, Crystal Structure Of The Cytochrome P450-Cam Active Site
Mutant Thr252ala
pdb|3CPP|A Chain A, Crystal Structure Of The Carbon
Monoxy-Substrate-Cytochrome P450-Cam Ternary Complex
pdb|4CP4|A Chain A, Crystal Structure Of The Cytochrome P450-Cam Active Site
Mutant Thr252ala
pdb|4CPP|A Chain A, Crystal Structures Of Cytochrome P450-Cam Complexed With
Camphane, Thiocamphor, And Adamantane: Factors
Controlling P450 Substrate Hydroxylation
pdb|5CP4|A Chain A, Cryogenic Structure Of P450cam
pdb|5CPP|A Chain A, The Structural Basis For Substrate-Induced Changes In
Redox Potential And Spin Equilibrium In Cytochrome
P-450(Cam)
pdb|6CPP|A Chain A, Crystal Structures Of Cytochrome P450-Cam Complexed With
Camphane, Thiocamphor, And Adamantane: Factors
Controlling P450 Substrate Hydroxylation
pdb|7CPP|A Chain A, The Structural Basis For Substrate-Induced Changes In
Redox Potential And Spin Equilibrium In Cytochrome
P450(Cam)
pdb|8CPP|A Chain A, Crystal Structures Of Cytochrome P450-Cam Complexed With
Camphane, Thiocamphor, And Adamantane: Factors
Controlling P450 Substrate Hydroxylation
Length = 414
Score = 27.7 bits (60), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 22 EAREFIEVASDVMRERQFDLQGWEITGDPETEKPTSLLGLLWNKVEDTLSVSIESLK 78
EA +FI + D +RQF ++ G P +K L N++++ IESL+
Sbjct: 94 EAYDFIPTSMDPPEQRQFRALANQVVGMPVVDK-------LENRIQELACSLIESLR 143
>pdb|1QMQ|A Chain A, Optical Detection Of Cytochrome P450 By Sensitizer-Linked
Substrates
pdb|1GJM|A Chain A, Covalent Attachment Of An Electroactive Sulphydryl Reagent
In The Active Site Of Cytochrome P450cam
pdb|1K2O|A Chain A, Cytochrome P450cam With Bound
Bis(2,2'-Bipyridine)-(5-Methyl-2-2'-
Bipyridine)-C2-Adamantane Ruthenium (Ii)
pdb|1K2O|B Chain B, Cytochrome P450cam With Bound
Bis(2,2'-Bipyridine)-(5-Methyl-2-2'-
Bipyridine)-C2-Adamantane Ruthenium (Ii)
pdb|1T87|A Chain A, Crystal Structure Of The Ferrous Co-Bound Cytochrome
P450cam (C334a)
pdb|1T87|B Chain B, Crystal Structure Of The Ferrous Co-Bound Cytochrome
P450cam (C334a)
pdb|1T88|A Chain A, Crystal Structure Of The Ferrous Cytochrome P450cam
(C334a)
pdb|1T88|B Chain B, Crystal Structure Of The Ferrous Cytochrome P450cam
(C334a)
pdb|3L61|A Chain A, Crystal Structure Of Substrate-Free P450cam At 200 Mm [k+]
pdb|3L62|A Chain A, Crystal Structure Of Substrate-Free P450cam At Low [k+]
pdb|3L63|A Chain A, Crystal Structure Of Camphor-Bound P450cam At Low [k+]
pdb|3OIA|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-C8gluetg-Bio
pdb|3OL5|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized With
A Tethered Substrate Analog 3oh-Adac1-C8-Dans
pdb|3P6M|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-C8-Dans
pdb|3P6N|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-C8-Dans
pdb|3P6O|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-Etg-Dans
pdb|3P6P|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog Adac1-C6-Bio
pdb|3P6Q|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac2-Etg-Boc
pdb|3P6R|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
3oh-Adac1-Etg-Boc
pdb|3P6S|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac2-C8-Dans
pdb|3P6T|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac2-C8-Dans
pdb|3P6U|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac3-C6-Dans
pdb|3P6V|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
3et-Adac1-Etg-Boc
pdb|3P6W|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac3-Etg-Boc
pdb|3P6X|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac3-C8-Dans
pdb|4G3R|A Chain A, Crystal Structure Of Nitrosyl Cytochrome P450cam
pdb|4G3R|B Chain B, Crystal Structure Of Nitrosyl Cytochrome P450cam
Length = 414
Score = 27.7 bits (60), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 22 EAREFIEVASDVMRERQFDLQGWEITGDPETEKPTSLLGLLWNKVEDTLSVSIESLK 78
EA +FI + D +RQF ++ G P +K L N++++ IESL+
Sbjct: 94 EAYDFIPTSMDPPEQRQFRALANQVVGMPVVDK-------LENRIQELACSLIESLR 143
>pdb|2GQX|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A) WITH PENTACHLOROBENZENE
pdb|2GQX|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A) WITH PENTACHLOROBENZENE
pdb|2GR6|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A)
pdb|2GR6|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A)
Length = 405
Score = 26.9 bits (58), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 22 EAREFIEVASDVMRERQFDLQGWEITGDPETEKPTSLLGLLWNKVEDTLSVSIESLK 78
EA +FI + D +RQF ++ G P +K L N++++ IESL+
Sbjct: 85 EAFDFIPTSMDPPEQRQFRALANQVVGMPVVDK-------LENRIQELACSLIESLR 134
>pdb|1C8J|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant (F87wY96F)
pdb|1C8J|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant (F87wY96F)
Length = 414
Score = 26.9 bits (58), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 22 EAREFIEVASDVMRERQFDLQGWEITGDPETEKPTSLLGLLWNKVEDTLSVSIESLK 78
EA +FI + D +RQF ++ G P +K L N++++ IESL+
Sbjct: 94 EAFDFIPTSMDPPEQRQFRALANQVVGMPVVDK-------LENRIQELACSLIESLR 143
>pdb|1J51|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A) WITH 1,3,5-Trichlorobenzene
pdb|1J51|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A) WITH 1,3,5-Trichlorobenzene
pdb|1J51|C Chain C, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A) WITH 1,3,5-Trichlorobenzene
pdb|1J51|D Chain D, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A) WITH 1,3,5-Trichlorobenzene
pdb|1MPW|A Chain A, Molecular Recognition In (+)-a-pinene Oxidation By
Cytochrome P450cam
pdb|1MPW|B Chain B, Molecular Recognition In (+)-a-pinene Oxidation By
Cytochrome P450cam
pdb|2FRZ|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A)
pdb|2FRZ|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A)
Length = 414
Score = 26.9 bits (58), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 22 EAREFIEVASDVMRERQFDLQGWEITGDPETEKPTSLLGLLWNKVEDTLSVSIESLK 78
EA +FI + D +RQF ++ G P +K L N++++ IESL+
Sbjct: 94 EAFDFIPTSMDPPEQRQFRALANQVVGMPVVDK-------LENRIQELACSLIESLR 143
>pdb|1VME|A Chain A, Crystal Structure Of Flavoprotein (Tm0755) From Thermotoga
Maritima At 1.80 A Resolution
pdb|1VME|B Chain B, Crystal Structure Of Flavoprotein (Tm0755) From Thermotoga
Maritima At 1.80 A Resolution
Length = 410
Score = 26.9 bits (58), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 48 GDPETEKPTSLLGLLWNKVEDTLSVSIESLKEMQYQK-VYQATSSTRSAPGGIRETKKAV 106
GDP+ K T + + VE+ +I+SLKE + VY+ + R A I E K +
Sbjct: 261 GDPKKGKVTVIYDSXYGFVENVXKKAIDSLKEKGFTPVVYKFSDEERPA---ISEILKDI 317
Query: 107 CDS 109
DS
Sbjct: 318 PDS 320
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.313 0.131 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,408,978
Number of Sequences: 62578
Number of extensions: 204878
Number of successful extensions: 464
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 460
Number of HSP's gapped (non-prelim): 45
length of query: 184
length of database: 14,973,337
effective HSP length: 93
effective length of query: 91
effective length of database: 9,153,583
effective search space: 832976053
effective search space used: 832976053
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 48 (23.1 bits)