BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10455
(99 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|169648431|gb|ACA62217.1| Mi-2 [Drosophila melanogaster]
Length = 243
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 129 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 183
>gi|169648423|gb|ACA62213.1| Mi-2 [Drosophila melanogaster]
Length = 246
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 132 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVPR 186
>gi|195591651|ref|XP_002085552.1| GD12243 [Drosophila simulans]
gi|194197561|gb|EDX11137.1| GD12243 [Drosophila simulans]
Length = 275
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 139 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 193
>gi|169648419|gb|ACA62211.1| Mi-2 [Drosophila melanogaster]
Length = 356
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 242 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 296
>gi|169648427|gb|ACA62215.1| Mi-2 [Drosophila melanogaster]
Length = 381
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 267 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 321
>gi|169648399|gb|ACA62201.1| Mi-2 [Drosophila melanogaster]
Length = 393
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 279 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 333
>gi|169648395|gb|ACA62199.1| Mi-2 [Drosophila melanogaster]
gi|169648397|gb|ACA62200.1| Mi-2 [Drosophila melanogaster]
gi|169648401|gb|ACA62202.1| Mi-2 [Drosophila melanogaster]
gi|169648403|gb|ACA62203.1| Mi-2 [Drosophila melanogaster]
gi|169648405|gb|ACA62204.1| Mi-2 [Drosophila melanogaster]
gi|169648407|gb|ACA62205.1| Mi-2 [Drosophila melanogaster]
gi|169648409|gb|ACA62206.1| Mi-2 [Drosophila melanogaster]
gi|169648411|gb|ACA62207.1| Mi-2 [Drosophila melanogaster]
gi|169648413|gb|ACA62208.1| Mi-2 [Drosophila melanogaster]
gi|169648415|gb|ACA62209.1| Mi-2 [Drosophila melanogaster]
gi|169648421|gb|ACA62212.1| Mi-2 [Drosophila melanogaster]
gi|169648425|gb|ACA62214.1| Mi-2 [Drosophila melanogaster]
gi|169648433|gb|ACA62218.1| Mi-2 [Drosophila melanogaster]
gi|169648437|gb|ACA62220.1| Mi-2 [Drosophila melanogaster]
gi|169648439|gb|ACA62221.1| Mi-2 [Drosophila melanogaster]
gi|169648443|gb|ACA62223.1| Mi-2 [Drosophila melanogaster]
gi|169648449|gb|ACA62226.1| Mi-2 [Drosophila melanogaster]
gi|169648451|gb|ACA62227.1| Mi-2 [Drosophila melanogaster]
Length = 393
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 279 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 333
>gi|2645435|gb|AAB87384.1| CHD3 [Drosophila melanogaster]
Length = 1518
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1382 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 1436
>gi|169648441|gb|ACA62222.1| Mi-2 [Drosophila melanogaster]
Length = 393
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 279 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 333
>gi|169648445|gb|ACA62224.1| Mi-2 [Drosophila melanogaster]
Length = 393
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 279 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 333
>gi|328716042|ref|XP_003245819.1| PREDICTED: chromodomain-helicase-DNA-binding protein Mi-2 homolog
[Acyrthosiphon pisum]
Length = 2002
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1860 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 1914
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 32/46 (69%), Gaps = 6/46 (13%)
Query: 53 RSKRRSR-GGGRKKGSMGKKAGASTSKVPTLKIKLGKRKQASSITD 97
RS R R GGG K+ S G STSKVPTLKI+LGKRKQASS D
Sbjct: 248 RSNRAKRSGGGNKRNSQG-----STSKVPTLKIRLGKRKQASSDDD 288
>gi|169648429|gb|ACA62216.1| Mi-2 [Drosophila melanogaster]
Length = 393
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 279 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 333
>gi|332029993|gb|EGI69818.1| Chromodomain-helicase-DNA-binding protein Mi-2-like protein
[Acromyrmex echinatior]
Length = 1852
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1711 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 1765
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 29/40 (72%), Gaps = 7/40 (17%)
Query: 55 KRRSRGGGRKKGSMGKKAGASTSKVPTLKIKLGKRKQASS 94
KR+SRG KKG KKA SKVPTLKIKLGKRK+ SS
Sbjct: 231 KRKSRGSRAKKG---KKA----SKVPTLKIKLGKRKRGSS 263
>gi|169648435|gb|ACA62219.1| Mi-2 [Drosophila melanogaster]
Length = 393
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 279 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDIKSDVSR 333
>gi|21064287|gb|AAM29373.1| LD32039p [Drosophila melanogaster]
Length = 789
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 653 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 707
>gi|195166785|ref|XP_002024215.1| GL22908 [Drosophila persimilis]
gi|194107570|gb|EDW29613.1| GL22908 [Drosophila persimilis]
Length = 1898
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1762 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 1816
>gi|198466497|ref|XP_002135204.1| GA23929 [Drosophila pseudoobscura pseudoobscura]
gi|198150627|gb|EDY73831.1| GA23929 [Drosophila pseudoobscura pseudoobscura]
Length = 2036
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1900 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 1954
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 22/32 (68%)
Query: 63 RKKGSMGKKAGASTSKVPTLKIKLGKRKQASS 94
RK+ GKK + KVPTLKIK GKRK+ SS
Sbjct: 247 RKRSGRGKKGRRPSGKVPTLKIKFGKRKRDSS 278
>gi|194874444|ref|XP_001973399.1| GG13364 [Drosophila erecta]
gi|190655182|gb|EDV52425.1| GG13364 [Drosophila erecta]
Length = 880
Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 787 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 841
>gi|195428619|ref|XP_002062369.1| GK17504 [Drosophila willistoni]
gi|194158454|gb|EDW73355.1| GK17504 [Drosophila willistoni]
Length = 2023
Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1887 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 1941
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 22/32 (68%)
Query: 63 RKKGSMGKKAGASTSKVPTLKIKLGKRKQASS 94
RK+ GKK SKVPTLKIK GKRK+ SS
Sbjct: 246 RKRSGRGKKVRRPLSKVPTLKIKFGKRKRDSS 277
>gi|194751939|ref|XP_001958281.1| GF10842 [Drosophila ananassae]
gi|190625563|gb|EDV41087.1| GF10842 [Drosophila ananassae]
Length = 1971
Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1835 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 1889
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 24/32 (75%)
Query: 63 RKKGSMGKKAGASTSKVPTLKIKLGKRKQASS 94
RK+ S GKK + KVPTLKIKLGKRK+ SS
Sbjct: 241 RKRSSRGKKGRRPSGKVPTLKIKLGKRKRDSS 272
>gi|169648447|gb|ACA62225.1| Mi-2 [Drosophila melanogaster]
Length = 393
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 279 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 333
>gi|345481883|ref|XP_001605650.2| PREDICTED: chromodomain-helicase-DNA-binding protein Mi-2 homolog
[Nasonia vitripennis]
Length = 2009
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1869 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 1923
>gi|195128581|ref|XP_002008741.1| GI13663 [Drosophila mojavensis]
gi|193920350|gb|EDW19217.1| GI13663 [Drosophila mojavensis]
Length = 1992
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1855 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 1909
>gi|242023690|ref|XP_002432264.1| Chromodomain helicase-DNA-binding protein, putative [Pediculus
humanus corporis]
gi|212517673|gb|EEB19526.1| Chromodomain helicase-DNA-binding protein, putative [Pediculus
humanus corporis]
Length = 1999
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1868 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 1922
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 23/33 (69%)
Query: 62 GRKKGSMGKKAGASTSKVPTLKIKLGKRKQASS 94
GRKK KK SKVPTLKIKLGKRK+ SS
Sbjct: 236 GRKKRGRSKKGTKKNSKVPTLKIKLGKRKRGSS 268
>gi|442633513|ref|NP_001262078.1| Mi-2, isoform D [Drosophila melanogaster]
gi|440216038|gb|AGB94771.1| Mi-2, isoform D [Drosophila melanogaster]
Length = 1973
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1837 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 1891
>gi|195379440|ref|XP_002048487.1| GJ13998 [Drosophila virilis]
gi|194155645|gb|EDW70829.1| GJ13998 [Drosophila virilis]
Length = 2012
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1876 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 1930
>gi|195496103|ref|XP_002095551.1| GE22457 [Drosophila yakuba]
gi|194181652|gb|EDW95263.1| GE22457 [Drosophila yakuba]
Length = 1982
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1846 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 1900
>gi|195354288|ref|XP_002043630.1| GM15785 [Drosophila sechellia]
gi|194127798|gb|EDW49841.1| GM15785 [Drosophila sechellia]
Length = 1921
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1785 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 1839
>gi|62472261|ref|NP_001014591.1| Mi-2, isoform B [Drosophila melanogaster]
gi|61678453|gb|AAX52739.1| Mi-2, isoform B [Drosophila melanogaster]
Length = 1983
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1847 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 1901
>gi|340726708|ref|XP_003401695.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein Mi-2 homolog [Bombus terrestris]
Length = 1974
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1834 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 1888
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 29/40 (72%), Gaps = 7/40 (17%)
Query: 55 KRRSRGGGRKKGSMGKKAGASTSKVPTLKIKLGKRKQASS 94
KR+SRG KKG KKA SKVPTLKIKLGKRK+ SS
Sbjct: 257 KRKSRGSRAKKG---KKA----SKVPTLKIKLGKRKRGSS 289
>gi|4325130|gb|AAD17276.1| dMi-2 protein [Drosophila melanogaster]
Length = 1982
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1846 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 1900
>gi|270013510|gb|EFA09958.1| hypothetical protein TcasGA2_TC012115 [Tribolium castaneum]
Length = 1969
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1833 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 1887
>gi|189240851|ref|XP_001812556.1| PREDICTED: similar to chromodomain helicase-DNA-binding protein 3
[Tribolium castaneum]
Length = 1966
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1830 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 1884
>gi|110777198|ref|XP_624414.2| PREDICTED: chromodomain-helicase-DNA-binding protein Mi-2 homolog
[Apis mellifera]
Length = 1966
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1826 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 1880
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 29/40 (72%), Gaps = 7/40 (17%)
Query: 55 KRRSRGGGRKKGSMGKKAGASTSKVPTLKIKLGKRKQASS 94
KR+SRG KKG KKA SKVPTLKIKLGKRK+ SS
Sbjct: 248 KRKSRGSRAKKG---KKA----SKVPTLKIKLGKRKRGSS 280
>gi|380020464|ref|XP_003694103.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein Mi-2 homolog [Apis florea]
Length = 1964
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1824 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 1878
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 25/40 (62%), Gaps = 7/40 (17%)
Query: 55 KRRSRGGGRKKGSMGKKAGASTSKVPTLKIKLGKRKQASS 94
KR+SRG KKG SKVPTLKIKLGKR + SS
Sbjct: 248 KRKSRGSRAKKGX-------KASKVPTLKIKLGKRXRGSS 280
>gi|24667055|ref|NP_649154.2| Mi-2, isoform A [Drosophila melanogaster]
gi|281366478|ref|NP_001163476.1| Mi-2, isoform C [Drosophila melanogaster]
gi|13124018|sp|O97159.2|CHDM_DROME RecName: Full=Chromodomain-helicase-DNA-binding protein Mi-2 homolog;
AltName: Full=ATP-dependent helicase Mi-2; Short=dMi-2
gi|23093096|gb|AAF49099.2| Mi-2, isoform A [Drosophila melanogaster]
gi|272455249|gb|ACZ94747.1| Mi-2, isoform C [Drosophila melanogaster]
Length = 1982
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1846 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 1900
>gi|307199491|gb|EFN80104.1| Chromodomain-helicase-DNA-binding protein Mi-2-like protein
[Harpegnathos saltator]
Length = 1948
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1806 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 1860
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 35/63 (55%), Gaps = 17/63 (26%)
Query: 49 EDDDRSKRRSRGG---------------GRKKGSMGKKA--GASTSKVPTLKIKLGKRKQ 91
+DD R+ R +RGG RK+ S G +A G SKVPTLKIKLGKRK+
Sbjct: 217 DDDSRNARANRGGTMQEAEDEEEDDEDSDRKRKSRGSRAKKGKKASKVPTLKIKLGKRKR 276
Query: 92 ASS 94
SS
Sbjct: 277 GSS 279
>gi|350424653|ref|XP_003493868.1| PREDICTED: chromodomain-helicase-DNA-binding protein Mi-2 homolog
[Bombus impatiens]
Length = 1965
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1825 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 1879
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 29/40 (72%), Gaps = 7/40 (17%)
Query: 55 KRRSRGGGRKKGSMGKKAGASTSKVPTLKIKLGKRKQASS 94
KR+SRG KKG KKA SKVPTLKIKLGKRK+ SS
Sbjct: 248 KRKSRGSRAKKG---KKA----SKVPTLKIKLGKRKRGSS 280
>gi|195020242|ref|XP_001985154.1| GH16907 [Drosophila grimshawi]
gi|193898636|gb|EDV97502.1| GH16907 [Drosophila grimshawi]
Length = 2013
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1876 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 1930
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 55 KRRSRGGGRKKGSMGKKAGASTSKVPTLKIKLGKRKQASS 94
K R + GR G++ GA+ KVPTLKIK GKRK+ SS
Sbjct: 240 KPRRKRSGRSSNKKGRRQGAA--KVPTLKIKFGKRKRDSS 277
>gi|383851360|ref|XP_003701201.1| PREDICTED: chromodomain-helicase-DNA-binding protein Mi-2 homolog
[Megachile rotundata]
Length = 1967
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1827 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 1881
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 29/40 (72%), Gaps = 7/40 (17%)
Query: 55 KRRSRGGGRKKGSMGKKAGASTSKVPTLKIKLGKRKQASS 94
KR+SRG KKG KKA SKVPTLKIKLGKRK+ SS
Sbjct: 249 KRKSRGSRAKKG---KKA----SKVPTLKIKLGKRKRGSS 281
>gi|307180140|gb|EFN68184.1| Chromodomain-helicase-DNA-binding protein Mi-2-like protein
[Camponotus floridanus]
Length = 1960
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1819 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 1873
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/26 (76%), Positives = 21/26 (80%), Gaps = 4/26 (15%)
Query: 69 GKKAGASTSKVPTLKIKLGKRKQASS 94
GKKA SKVPTLKIKLGKRK+ SS
Sbjct: 258 GKKA----SKVPTLKIKLGKRKRGSS 279
>gi|357605668|gb|EHJ64730.1| putative Chromodomain helicase-DNA-binding protein Mi-2-like protein
[Danaus plexippus]
Length = 1963
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1818 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 1872
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 41 EEVLDDEDEDD--DRSKRRSRGGGRKKGSMGKKAGASTSKVPTLKIKLGKRKQASSITD 97
E+ +D+ +E+D D R GRK + KVPTLKIK KRK+ SS D
Sbjct: 233 EDSIDEPEEEDMSDEGTPAPRKRGRKPKHAPRGKPGRKPKVPTLKIKFSKRKRTSSEED 291
>gi|198432555|ref|XP_002131918.1| PREDICTED: similar to chromodomain helicase DNA binding protein 3
[Ciona intestinalis]
Length = 1904
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 43/48 (89%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
MSLNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D
Sbjct: 1730 MSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLAD 1777
>gi|301623129|ref|XP_002940874.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Xenopus
(Silurana) tropicalis]
Length = 1954
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1789 MALNARFSEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1843
>gi|321479460|gb|EFX90416.1| hypothetical protein DAPPUDRAFT_232072 [Daphnia pulex]
Length = 2083
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1908 MALNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 1962
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 25/38 (65%), Gaps = 5/38 (13%)
Query: 62 GRKKGSMGKKAGASTS-----KVPTLKIKLGKRKQASS 94
GRKK S G +TS KVPT+KIKLGKRK+ SS
Sbjct: 300 GRKKRSRKPTKGGNTSTGKKGKVPTIKIKLGKRKRTSS 337
>gi|432920325|ref|XP_004079948.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like [Oryzias
latipes]
Length = 1963
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1796 MALNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1850
>gi|158300661|ref|XP_320523.4| AGAP012009-PA [Anopheles gambiae str. PEST]
gi|157013268|gb|EAA00692.4| AGAP012009-PA [Anopheles gambiae str. PEST]
Length = 2037
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1891 MALNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 1945
>gi|443719422|gb|ELU09603.1| hypothetical protein CAPTEDRAFT_166178 [Capitella teleta]
Length = 1711
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 46/55 (83%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNARF E+ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D +D R
Sbjct: 1603 MALNARFAELECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKQDVSR 1657
>gi|348523828|ref|XP_003449425.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Oreochromis
niloticus]
Length = 2125
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 43/48 (89%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D
Sbjct: 1891 MALNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSD 1938
>gi|189521245|ref|XP_696641.3| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Danio rerio]
Length = 2063
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 43/48 (89%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D
Sbjct: 1896 MALNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSD 1943
>gi|410907027|ref|XP_003966993.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like [Takifugu
rubripes]
Length = 2102
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1855 MALNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1909
>gi|169648417|gb|ACA62210.1| Mi-2 [Drosophila melanogaster]
Length = 393
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
MSLNARF EVECLAESHQHLSKESLAG+KPANAVLHKV+ EE+L D D R
Sbjct: 279 MSLNARFAEVECLAESHQHLSKESLAGDKPANAVLHKVLNPLEELLSDMKSDVSR 333
>gi|405972247|gb|EKC37026.1| Chromodomain-helicase-DNA-binding protein Mi-2-like protein
[Crassostrea gigas]
Length = 2123
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 46/55 (83%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNARF E+ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D +D R
Sbjct: 1822 MALNARFAELECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKQDVSR 1876
>gi|395538665|ref|XP_003771295.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like
[Sarcophilus harrisii]
Length = 143
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D D R
Sbjct: 47 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSDMKADVTR 101
>gi|157134600|ref|XP_001663323.1| chromodomain helicase DNA binding protein [Aedes aegypti]
gi|108870421|gb|EAT34646.1| AAEL013136-PA [Aedes aegypti]
Length = 1983
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1840 MALNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 1894
>gi|390367174|ref|XP_003731194.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like
[Strongylocentrotus purpuratus]
Length = 2202
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/52 (78%), Positives = 44/52 (84%), Gaps = 2/52 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDED 50
M+LNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D
Sbjct: 1948 MALNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSD 1999
>gi|260812972|ref|XP_002601194.1| hypothetical protein BRAFLDRAFT_214465 [Branchiostoma floridae]
gi|229286485|gb|EEN57206.1| hypothetical protein BRAFLDRAFT_214465 [Branchiostoma floridae]
Length = 254
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LN RF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 171 MALNTRFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVSR 225
>gi|312372079|gb|EFR20122.1| hypothetical protein AND_20633 [Anopheles darlingi]
Length = 2227
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 2082 MALNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 2136
>gi|170036699|ref|XP_001846200.1| chromodomain helicase-DNA-binding protein 3 [Culex quinquefasciatus]
gi|167879513|gb|EDS42896.1| chromodomain helicase-DNA-binding protein 3 [Culex quinquefasciatus]
Length = 1982
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 43/48 (89%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LNARF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D
Sbjct: 1890 MALNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSD 1937
>gi|74203871|dbj|BAE28532.1| unnamed protein product [Mus musculus]
Length = 240
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D D R
Sbjct: 144 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSDMKADVTR 198
>gi|327288760|ref|XP_003229093.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like [Anolis
carolinensis]
Length = 2059
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LN RF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1894 MALNTRFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1948
>gi|326671885|ref|XP_003199545.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Danio rerio]
Length = 1985
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LN RF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1810 MALNTRFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1864
>gi|148667387|gb|EDK99803.1| mCG144885 [Mus musculus]
Length = 322
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D D R
Sbjct: 226 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSDMKADVTR 280
>gi|158262574|gb|AAI54399.1| CHD4 protein [Bos taurus]
Length = 343
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D D R
Sbjct: 247 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSDMKADVTR 301
>gi|13543768|gb|AAH06035.1| Chd4 protein, partial [Mus musculus]
Length = 829
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 733 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 780
>gi|355766839|gb|EHH62560.1| hypothetical protein EGM_20938, partial [Macaca fascicularis]
Length = 1262
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D D R
Sbjct: 1170 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSDMKADVTR 1224
>gi|149049417|gb|EDM01871.1| chromodomain helicase DNA binding protein 4, isoform CRA_a [Rattus
norvegicus]
Length = 1003
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D D R
Sbjct: 881 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSDMKADVTR 935
>gi|334328751|ref|XP_003341117.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like
[Monodelphis domestica]
Length = 1730
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1562 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1616
>gi|149049419|gb|EDM01873.1| chromodomain helicase DNA binding protein 4, isoform CRA_c [Rattus
norvegicus]
Length = 977
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 881 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 928
>gi|332838463|ref|XP_508960.3| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 4 isoform 3 [Pan troglodytes]
Length = 1825
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1729 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1776
>gi|317418651|emb|CBN80689.1| Chromodomain-helicase-DNA-binding protein 5 [Dicentrarchus labrax]
Length = 1981
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LN RF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1806 MALNTRFTEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1860
>gi|156379811|ref|XP_001631649.1| predicted protein [Nematostella vectensis]
gi|156218693|gb|EDO39586.1| predicted protein [Nematostella vectensis]
Length = 203
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 46/55 (83%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNARF E+ECLAESHQHLSKESL+GNKPANAVLHKV+ EE+L D D +R
Sbjct: 110 MALNARFAELECLAESHQHLSKESLSGNKPANAVLHKVLNQLEELLADMKGDVNR 164
>gi|345313280|ref|XP_003429367.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like, partial
[Ornithorhynchus anatinus]
Length = 1338
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1258 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1305
>gi|5911978|emb|CAB55959.1| hypothetical protein [Homo sapiens]
Length = 1388
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1257 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1311
>gi|431906391|gb|ELK10588.1| Chromodomain-helicase-DNA-binding protein 5 [Pteropus alecto]
Length = 1842
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1717 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1771
>gi|432860089|ref|XP_004069385.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like [Oryzias
latipes]
Length = 2111
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D
Sbjct: 1941 MALNTRFTEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSD 1988
>gi|410032225|ref|XP_525165.4| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Pan
troglodytes]
Length = 819
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D
Sbjct: 680 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSD 727
>gi|431905346|gb|ELK10391.1| Chromodomain-helicase-DNA-binding protein 4 [Pteropus alecto]
Length = 1854
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1758 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1805
>gi|156717248|ref|NP_001096166.1| chromodomain helicase DNA binding protein 4 [Xenopus (Silurana)
tropicalis]
gi|126631946|gb|AAI33720.1| chd4 protein [Xenopus (Silurana) tropicalis]
Length = 1888
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1793 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1840
>gi|348571006|ref|XP_003471287.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like [Cavia
porcellus]
Length = 2442
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 2214 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 2268
>gi|281346162|gb|EFB21746.1| hypothetical protein PANDA_013140 [Ailuropoda melanoleuca]
Length = 1814
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1685 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1739
>gi|427798209|gb|JAA64556.1| Putative chromatin remodeling complex wstf-iswi small subunit,
partial [Rhipicephalus pulchellus]
Length = 1386
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LN RF E+ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1316 MALNTRFAELECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKSDVSR 1370
>gi|351713762|gb|EHB16681.1| Chromodomain-helicase-DNA-binding protein 5 [Heterocephalus glaber]
Length = 2263
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 2080 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 2134
>gi|148227774|ref|NP_001080504.1| chromodomain helicase DNA binding protein 4 [Xenopus laevis]
gi|28422180|gb|AAH46866.1| B230399n07 protein [Xenopus laevis]
Length = 1893
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1798 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1845
>gi|355557485|gb|EHH14265.1| hypothetical protein EGK_00158 [Macaca mulatta]
Length = 2247
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1969 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 2023
>gi|67514207|gb|AAH98195.1| Chd5 protein [Mus musculus]
Length = 368
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 237 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 291
>gi|383415431|gb|AFH30929.1| chromodomain-helicase-DNA-binding protein 4 [Macaca mulatta]
Length = 1899
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1803 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1850
>gi|37359954|dbj|BAC97955.1| mKIAA0444 protein [Mus musculus]
Length = 702
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D
Sbjct: 577 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSD 624
>gi|390467440|ref|XP_002752322.2| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Callithrix
jacchus]
Length = 1814
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1718 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1765
>gi|34532335|dbj|BAC86391.1| unnamed protein product [Homo sapiens]
Length = 671
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D
Sbjct: 543 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSD 590
>gi|363728319|ref|XP_003640489.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 4 [Gallus gallus]
Length = 1924
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1824 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1871
>gi|24047226|gb|AAH38596.1| CHD4 protein [Homo sapiens]
gi|167773199|gb|ABZ92034.1| chromodomain helicase DNA binding protein 4 [synthetic construct]
Length = 1937
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1841 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1888
>gi|3413850|dbj|BAA32289.1| KIAA0444 protein [Homo sapiens]
Length = 978
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 847 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 901
>gi|395743837|ref|XP_002822857.2| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 4 [Pongo abelii]
Length = 1898
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1802 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1849
>gi|297261645|ref|XP_001107252.2| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like isoform 8
[Macaca mulatta]
Length = 1912
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1816 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1863
>gi|402884886|ref|XP_003905901.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Papio anubis]
Length = 1912
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1816 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1863
>gi|397499204|ref|XP_003820349.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4 isoform 1 [Pan
paniscus]
gi|410350197|gb|JAA41702.1| chromodomain helicase DNA binding protein 4 [Pan troglodytes]
Length = 1905
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1809 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1856
>gi|380798783|gb|AFE71267.1| chromodomain-helicase-DNA-binding protein 4, partial [Macaca mulatta]
Length = 1847
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1751 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1798
>gi|355563925|gb|EHH20425.1| hypothetical protein EGK_03279 [Macaca mulatta]
Length = 1899
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1803 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1850
>gi|326912771|ref|XP_003202720.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like
[Meleagris gallopavo]
Length = 1922
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1822 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1869
>gi|410963635|ref|XP_003988369.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4 isoform 1
[Felis catus]
Length = 1912
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1816 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1863
>gi|410301138|gb|JAA29169.1| chromodomain helicase DNA binding protein 4 [Pan troglodytes]
Length = 1912
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1816 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1863
>gi|334348294|ref|XP_001369474.2| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Monodelphis
domestica]
Length = 1823
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D D R
Sbjct: 1727 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSDMKADVTR 1781
>gi|224043897|ref|XP_002197085.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Taeniopygia
guttata]
Length = 1919
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1819 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1866
>gi|51599156|ref|NP_001264.2| chromodomain-helicase-DNA-binding protein 4 [Homo sapiens]
gi|311033360|sp|Q14839.2|CHD4_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 4;
Short=CHD-4; AltName: Full=ATP-dependent helicase CHD4;
AltName: Full=Mi-2 autoantigen 218 kDa protein; AltName:
Full=Mi2-beta
Length = 1912
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1816 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1863
>gi|397499206|ref|XP_003820350.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4 isoform 2 [Pan
paniscus]
gi|1107696|emb|CAA60384.1| Mi-2 protein [Homo sapiens]
gi|119609184|gb|EAW88778.1| chromodomain helicase DNA binding protein 4, isoform CRA_b [Homo
sapiens]
gi|410227430|gb|JAA10934.1| chromodomain helicase DNA binding protein 4 [Pan troglodytes]
gi|410350195|gb|JAA41701.1| chromodomain helicase DNA binding protein 4 [Pan troglodytes]
Length = 1912
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1816 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1863
>gi|410301140|gb|JAA29170.1| chromodomain helicase DNA binding protein 4 [Pan troglodytes]
Length = 1914
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1818 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1865
>gi|410227432|gb|JAA10935.1| chromodomain helicase DNA binding protein 4 [Pan troglodytes]
gi|410350199|gb|JAA41703.1| chromodomain helicase DNA binding protein 4 [Pan troglodytes]
Length = 1914
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1818 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1865
>gi|441670660|ref|XP_003273866.2| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 4 [Nomascus leucogenys]
Length = 1910
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1814 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1861
>gi|432111850|gb|ELK34892.1| Chromodomain-helicase-DNA-binding protein 4 [Myotis davidii]
Length = 1912
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1816 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1863
>gi|403303237|ref|XP_003942247.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Saimiri
boliviensis boliviensis]
Length = 1888
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1792 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1839
>gi|383415433|gb|AFH30930.1| chromodomain-helicase-DNA-binding protein 4 [Macaca mulatta]
gi|384945022|gb|AFI36116.1| chromodomain-helicase-DNA-binding protein 4 [Macaca mulatta]
Length = 1912
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1816 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1863
>gi|410963637|ref|XP_003988370.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4 isoform 2
[Felis catus]
Length = 1905
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1809 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1856
>gi|380809128|gb|AFE76439.1| chromodomain-helicase-DNA-binding protein 4 [Macaca mulatta]
gi|383415429|gb|AFH30928.1| chromodomain-helicase-DNA-binding protein 4 [Macaca mulatta]
gi|384945024|gb|AFI36117.1| chromodomain-helicase-DNA-binding protein 4 [Macaca mulatta]
Length = 1905
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1809 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1856
>gi|354467283|ref|XP_003496099.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Cricetulus
griseus]
Length = 1902
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1806 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1853
>gi|327283577|ref|XP_003226517.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like [Anolis
carolinensis]
Length = 1918
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1817 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1864
>gi|194211609|ref|XP_001496418.2| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Equus
caballus]
Length = 1912
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1816 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1863
>gi|193785938|dbj|BAG54725.1| unnamed protein product [Homo sapiens]
Length = 1886
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1790 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1837
>gi|119609185|gb|EAW88779.1| chromodomain helicase DNA binding protein 4, isoform CRA_c [Homo
sapiens]
Length = 1908
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1813 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1860
>gi|119609183|gb|EAW88777.1| chromodomain helicase DNA binding protein 4, isoform CRA_a [Homo
sapiens]
Length = 1911
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1816 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1863
>gi|417413954|gb|JAA53286.1| Putative chromatin remodeling complex wstf-iswi small subunit,
partial [Desmodus rotundus]
Length = 1766
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1670 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1717
>gi|296479122|tpg|DAA21237.1| TPA: chromodomain helicase DNA binding protein 5 [Bos taurus]
Length = 2099
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1911 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1965
>gi|344242425|gb|EGV98528.1| Chromodomain-helicase-DNA-binding protein 4 [Cricetulus griseus]
Length = 1930
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1834 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1881
>gi|350584424|ref|XP_003126577.3| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Sus scrofa]
gi|417515864|gb|JAA53737.1| chromodomain-helicase-DNA-binding protein 4 [Sus scrofa]
Length = 1912
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1816 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1863
>gi|301773764|ref|XP_002922290.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 4-like [Ailuropoda melanoleuca]
Length = 1906
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1810 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1857
>gi|426240369|ref|XP_004014081.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Ovis aries]
Length = 2056
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1792 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1846
>gi|39204553|ref|NP_666091.1| chromodomain-helicase-DNA-binding protein 4 [Mus musculus]
gi|51701319|sp|Q6PDQ2.1|CHD4_MOUSE RecName: Full=Chromodomain-helicase-DNA-binding protein 4;
Short=CHD-4
gi|35193271|gb|AAH58578.1| Chromodomain helicase DNA binding protein 4 [Mus musculus]
Length = 1915
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1819 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1866
>gi|395847597|ref|XP_003796455.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Otolemur
garnettii]
Length = 1912
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1816 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1863
>gi|359074223|ref|XP_002694217.2| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Bos taurus]
Length = 2042
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1911 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1965
>gi|348555034|ref|XP_003463329.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like [Cavia
porcellus]
Length = 1893
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1797 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1844
>gi|291392737|ref|XP_002712922.1| PREDICTED: chromodomain helicase DNA binding protein 4-like isoform 1
[Oryctolagus cuniculus]
Length = 1905
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1809 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1856
>gi|345791649|ref|XP_867754.2| PREDICTED: chromodomain-helicase-DNA-binding protein 4 isoform 3
[Canis lupus familiaris]
Length = 1912
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1816 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1863
>gi|392347634|ref|XP_232354.5| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Rattus
norvegicus]
Length = 1921
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1825 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1872
>gi|391331672|ref|XP_003740267.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein Mi-2 homolog [Metaseiulus occidentalis]
Length = 1925
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNARF E+ECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D D R
Sbjct: 1754 MALNARFAELECLAESHQHLSKESVAGNKPANAVLHKVLNQLEELLSDMKSDVSR 1808
>gi|301776989|ref|XP_002923917.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like
[Ailuropoda melanoleuca]
Length = 1948
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1817 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1871
>gi|60360510|dbj|BAD90499.1| mKIAA4075 protein [Mus musculus]
Length = 1945
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1849 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1896
>gi|426371465|ref|XP_004052667.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Gorilla
gorilla gorilla]
Length = 1759
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1663 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1710
>gi|20988518|gb|AAH30435.1| Chd3 protein [Mus musculus]
Length = 295
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 120 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 174
>gi|351715692|gb|EHB18611.1| Chromodomain-helicase-DNA-binding protein 4 [Heterocephalus glaber]
Length = 1912
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1816 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1863
>gi|392340124|ref|XP_001063352.3| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Rattus
norvegicus]
Length = 1921
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1825 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1872
>gi|354501163|ref|XP_003512662.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like
[Cricetulus griseus]
Length = 1977
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1805 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1859
>gi|440908595|gb|ELR58598.1| Chromodomain-helicase-DNA-binding protein 5, partial [Bos grunniens
mutus]
Length = 1920
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1789 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1843
>gi|440895655|gb|ELR47793.1| Chromodomain-helicase-DNA-binding protein 4 [Bos grunniens mutus]
Length = 1945
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1853 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1900
>gi|417414010|gb|JAA53313.1| Putative chromatin remodeling complex wstf-iswi small subunit,
partial [Desmodus rotundus]
Length = 1916
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1820 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1867
>gi|330417956|ref|NP_001193430.1| chromodomain-helicase-DNA-binding protein 4 [Bos taurus]
gi|296487143|tpg|DAA29256.1| TPA: chromodomain helicase DNA binding protein 4 [Bos taurus]
Length = 1912
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1816 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1863
>gi|291392739|ref|XP_002712923.1| PREDICTED: chromodomain helicase DNA binding protein 4-like isoform 2
[Oryctolagus cuniculus]
Length = 1912
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1816 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1863
>gi|358416078|ref|XP_609360.5| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Bos taurus]
Length = 1991
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1860 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1914
>gi|426227030|ref|XP_004007632.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Ovis aries]
Length = 1963
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1867 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1914
>gi|345314790|ref|XP_001520060.2| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like, partial
[Ornithorhynchus anatinus]
Length = 1760
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1513 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1567
>gi|444510914|gb|ELV09761.1| Chromodomain-helicase-DNA-binding protein 4 [Tupaia chinensis]
Length = 1875
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHKV+ EE+L D
Sbjct: 1777 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSD 1824
>gi|363741929|ref|XP_003642567.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Gallus
gallus]
Length = 1947
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1816 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1870
>gi|403420600|ref|NP_001258155.1| chromodomain-helicase-DNA-binding protein 5 [Rattus norvegicus]
Length = 1948
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1817 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1871
>gi|449486846|ref|XP_004174324.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 5 [Taeniopygia guttata]
Length = 2088
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1751 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1805
>gi|124487025|ref|NP_001074845.1| chromodomain helicase DNA binding protein 5 isoform 1 [Mus musculus]
Length = 1952
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1821 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1875
>gi|410966154|ref|XP_003989600.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Felis catus]
Length = 2003
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1844 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1898
>gi|345800756|ref|XP_546747.3| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Canis lupus
familiaris]
Length = 1986
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1855 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1909
>gi|148682990|gb|EDL14937.1| mCG131426 [Mus musculus]
Length = 1955
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1830 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1884
>gi|338722190|ref|XP_001492263.3| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Equus
caballus]
Length = 1930
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1799 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1853
>gi|189458814|ref|NP_083492.2| chromodomain helicase DNA binding protein 5 isoform 2 [Mus musculus]
Length = 1915
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1784 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1838
>gi|327289025|ref|XP_003229225.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like [Anolis
carolinensis]
Length = 2037
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1811 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1865
>gi|326932279|ref|XP_003212247.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like, partial
[Meleagris gallopavo]
Length = 1949
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1801 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1855
>gi|193785113|dbj|BAG54266.1| unnamed protein product [Homo sapiens]
Length = 577
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 404 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 458
>gi|410925745|ref|XP_003976340.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like [Takifugu
rubripes]
Length = 1955
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LN RF EVECLAESHQHLSKES++GNKPANAVLHKV+ EE+L D D +R
Sbjct: 1861 MALNTRFSEVECLAESHQHLSKESMSGNKPANAVLHKVLKQLEELLSDMKADVNR 1915
>gi|112362150|gb|AAI20421.1| CHD3 protein [Bos taurus]
Length = 326
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 153 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 207
>gi|410919217|ref|XP_003973081.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 5-like [Takifugu rubripes]
Length = 1982
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LN RF EVECLAESHQHLSKESL+GNKPANAVLHKV+ EE+L D D R
Sbjct: 1807 MALNTRFTEVECLAESHQHLSKESLSGNKPANAVLHKVLNQLEELLSDMKADVTR 1861
>gi|84040229|gb|AAI10649.1| CHD3 protein [Homo sapiens]
Length = 661
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 488 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 542
>gi|194383910|dbj|BAG59313.1| unnamed protein product [Homo sapiens]
Length = 604
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 431 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 485
>gi|444722915|gb|ELW63587.1| Chromodomain-helicase-DNA-binding protein 3 [Tupaia chinensis]
Length = 2077
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1904 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1958
>gi|281343214|gb|EFB18798.1| hypothetical protein PANDA_010098 [Ailuropoda melanoleuca]
Length = 1318
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1145 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1199
>gi|194384656|dbj|BAG59488.1| unnamed protein product [Homo sapiens]
Length = 979
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 806 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 860
>gi|301771598|ref|XP_002921219.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like, partial
[Ailuropoda melanoleuca]
Length = 1363
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1190 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1244
>gi|380798547|gb|AFE71149.1| chromodomain-helicase-DNA-binding protein 3 isoform 1, partial
[Macaca mulatta]
Length = 976
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 803 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 857
>gi|334323402|ref|XP_001369227.2| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Monodelphis
domestica]
Length = 2114
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1942 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1996
>gi|395836470|ref|XP_003791177.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 2
[Otolemur garnettii]
Length = 1964
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1791 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1845
>gi|332250910|ref|XP_003274592.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 3 [Nomascus leucogenys]
Length = 1985
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1827 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1881
>gi|52630322|ref|NP_005843.2| chromodomain-helicase-DNA-binding protein 3 isoform 2 [Homo sapiens]
gi|119610520|gb|EAW90114.1| chromodomain helicase DNA binding protein 3, isoform CRA_a [Homo
sapiens]
gi|119610522|gb|EAW90116.1| chromodomain helicase DNA binding protein 3, isoform CRA_a [Homo
sapiens]
Length = 1966
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1793 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1847
>gi|2645433|gb|AAB87383.1| CHD3 [Homo sapiens]
Length = 1944
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1793 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1847
>gi|395836468|ref|XP_003791176.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 1
[Otolemur garnettii]
Length = 1998
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1825 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1879
>gi|403274996|ref|XP_003929246.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 2
[Saimiri boliviensis boliviensis]
Length = 1966
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1793 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1847
>gi|332847234|ref|XP_003315413.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 2 [Pan
troglodytes]
Length = 1966
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1793 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1847
>gi|395748521|ref|XP_002827042.2| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 3 [Pongo abelii]
Length = 1993
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1820 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1874
>gi|359076762|ref|XP_003587462.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Bos taurus]
Length = 1833
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1660 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1714
>gi|311268331|ref|XP_003131999.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 1 [Sus
scrofa]
Length = 1968
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1795 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1849
>gi|113678140|ref|NP_001038323.1| chromodomain helicase DNA binding protein 4 [Danio rerio]
Length = 1929
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES++GNKPANAVLHKV+ EE+L D
Sbjct: 1835 MALNTRFSEVECLAESHQHLSKESMSGNKPANAVLHKVLKQLEELLSD 1882
>gi|426384013|ref|XP_004058571.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 2
[Gorilla gorilla gorilla]
Length = 1966
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1793 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1847
>gi|402898652|ref|XP_003912334.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 2
[Papio anubis]
Length = 1966
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1793 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1847
>gi|109113159|ref|XP_001110923.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like isoform 1
[Macaca mulatta]
Length = 1947
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1775 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1829
>gi|62530242|gb|AAX85378.1| chromodomain helicase DNA-binding protein 3 short isoform [Rattus
norvegicus]
Length = 1927
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1752 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1806
>gi|358417347|ref|XP_003583617.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 3 [Bos taurus]
Length = 2012
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1839 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1893
>gi|397477893|ref|XP_003810301.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 3 [Pan paniscus]
Length = 2011
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1827 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1881
>gi|62530240|gb|AAX85377.1| chromodomain helicase DNA-binding protein 3 short isoform [Rattus
norvegicus]
Length = 1924
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1749 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1803
>gi|432105627|gb|ELK31821.1| Chromodomain-helicase-DNA-binding protein 3 [Myotis davidii]
Length = 1998
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1825 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1879
>gi|311268329|ref|XP_003132000.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 2 [Sus
scrofa]
Length = 2002
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1829 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1883
>gi|292622418|ref|XP_685699.4| PREDICTED: chromodomain-helicase-DNA-binding protein 4 isoform 1
[Danio rerio]
Length = 1953
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES++GNKPANAVLHKV+ EE+L D
Sbjct: 1859 MALNTRFSEVECLAESHQHLSKESMSGNKPANAVLHKVLKQLEELLSD 1906
>gi|149053041|gb|EDM04858.1| chromodomain helicase DNA binding protein 3 [Rattus norvegicus]
Length = 1827
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1652 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1706
>gi|432909970|ref|XP_004078255.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like [Oryzias
latipes]
Length = 1882
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES++GNKPANAVLHKV+ EE+L D
Sbjct: 1779 MALNTRFSEVECLAESHQHLSKESMSGNKPANAVLHKVLKQLEELLSD 1826
>gi|62530236|gb|AAX85375.1| chromodomain helicase DNA-binding protein 3 short isoform [Rattus
norvegicus]
gi|62530238|gb|AAX85376.1| chromodomain helicase DNA-binding protein 3 short isoform [Rattus
norvegicus]
Length = 1925
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1750 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1804
>gi|403274994|ref|XP_003929245.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 1
[Saimiri boliviensis boliviensis]
Length = 2000
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1827 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1881
>gi|431894030|gb|ELK03836.1| Chromodomain-helicase-DNA-binding protein 3 [Pteropus alecto]
Length = 2007
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1834 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1888
>gi|383415425|gb|AFH30926.1| chromodomain-helicase-DNA-binding protein 3 isoform 1 [Macaca
mulatta]
Length = 1996
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1823 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1877
>gi|52630326|ref|NP_001005273.1| chromodomain-helicase-DNA-binding protein 3 isoform 1 [Homo sapiens]
gi|88911273|sp|Q12873.3|CHD3_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 3;
Short=CHD-3; AltName: Full=ATP-dependent helicase CHD3;
AltName: Full=Mi-2 autoantigen 240 kDa protein; AltName:
Full=Mi2-alpha; AltName: Full=Zinc finger helicase;
Short=hZFH
gi|119610521|gb|EAW90115.1| chromodomain helicase DNA binding protein 3, isoform CRA_b [Homo
sapiens]
Length = 2000
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1827 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1881
>gi|357527416|ref|NP_666131.3| chromodomain helicase DNA binding protein 3 [Mus musculus]
Length = 2055
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1880 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1934
>gi|148678548|gb|EDL10495.1| mCG140617 [Mus musculus]
Length = 1826
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1651 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1705
>gi|109113157|ref|XP_001111066.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like isoform 2
[Macaca mulatta]
Length = 1981
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1809 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1863
>gi|355753729|gb|EHH57694.1| hypothetical protein EGM_07385 [Macaca fascicularis]
Length = 1961
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1788 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1842
>gi|158420731|ref|NP_001005271.2| chromodomain-helicase-DNA-binding protein 3 isoform 3 [Homo sapiens]
Length = 2059
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1886 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1940
>gi|3298562|gb|AAC39923.1| zinc-finger helicase [Homo sapiens]
Length = 2000
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1827 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1881
>gi|332847232|ref|XP_003339343.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Pan
troglodytes]
Length = 2000
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1827 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1881
>gi|402898650|ref|XP_003912333.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 1
[Papio anubis]
Length = 2000
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1827 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1881
>gi|345800551|ref|XP_536627.3| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 3 [Canis lupus familiaris]
Length = 1999
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1826 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1880
>gi|332847230|ref|XP_512012.3| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 3 [Pan
troglodytes]
Length = 2058
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1885 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1939
>gi|392332091|ref|XP_001079343.3| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Rattus
norvegicus]
Length = 2080
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1905 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1959
>gi|426384011|ref|XP_004058570.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 1
[Gorilla gorilla gorilla]
Length = 2000
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1827 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1881
>gi|62530244|gb|AAX85379.1| chromodomain helicase DNA-binding protein 3 long isoform [Rattus
norvegicus]
gi|62530246|gb|AAX85380.1| chromodomain helicase DNA-binding protein 3 long isoform [Rattus
norvegicus]
gi|62530248|gb|AAX85381.1| chromodomain helicase DNA-binding protein 3 long isoform [Rattus
norvegicus]
gi|62530250|gb|AAX85382.1| chromodomain helicase DNA-binding protein 3 long isoform [Rattus
norvegicus]
Length = 1959
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1784 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1838
>gi|162318864|gb|AAI56473.1| Chromodomain helicase DNA binding protein 3 [synthetic construct]
Length = 2045
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1872 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1926
>gi|395533467|ref|XP_003768781.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 3 [Sarcophilus harrisii]
Length = 1971
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1799 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1853
>gi|348560832|ref|XP_003466217.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like [Cavia
porcellus]
Length = 1995
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1822 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1876
>gi|348530512|ref|XP_003452755.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Oreochromis
niloticus]
Length = 1950
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES++GNKPANAVLHKV+ EE+L D
Sbjct: 1855 MALNTRFSEVECLAESHQHLSKESMSGNKPANAVLHKVLKQLEELLSD 1902
>gi|432883650|ref|XP_004074311.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like [Oryzias
latipes]
Length = 1974
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES++GNKPANAVLHKV+ EE+L D
Sbjct: 1866 MALNTRFSEVECLAESHQHLSKESMSGNKPANAVLHKVLKQLEELLSD 1913
>gi|390462993|ref|XP_002806848.2| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 3, partial [Callithrix jacchus]
Length = 1943
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1772 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1826
>gi|355568209|gb|EHH24490.1| hypothetical protein EGK_08151 [Macaca mulatta]
Length = 1931
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1758 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1812
>gi|344290176|ref|XP_003416814.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Loxodonta
africana]
Length = 1863
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1734 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1788
>gi|392351358|ref|XP_220602.6| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Rattus
norvegicus]
Length = 2069
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1894 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1948
>gi|348526369|ref|XP_003450692.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like
[Oreochromis niloticus]
Length = 1972
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES++GNKPANAVLHKV+ EE+L D
Sbjct: 1869 MALNTRFSEVECLAESHQHLSKESMSGNKPANAVLHKVLKQLEELLSD 1916
>gi|410905767|ref|XP_003966363.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like [Takifugu
rubripes]
Length = 1967
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDD 46
M+LN RF EVECLAESHQHLSKES++GNKPANAVLHKV+ EE+L D
Sbjct: 1857 MALNTRFSEVECLAESHQHLSKESMSGNKPANAVLHKVLKQLEELLSD 1904
>gi|332265298|ref|XP_003281663.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Nomascus
leucogenys]
Length = 2435
Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 2304 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 2358
>gi|403297789|ref|XP_003939734.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Saimiri
boliviensis boliviensis]
Length = 2203
Score = 78.2 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 2072 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 2126
>gi|426327635|ref|XP_004024622.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Gorilla
gorilla gorilla]
Length = 2024
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1893 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1947
>gi|149024737|gb|EDL81234.1| rCG30890, isoform CRA_a [Rattus norvegicus]
Length = 1668
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1545 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1599
>gi|395841073|ref|XP_003793373.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Otolemur
garnettii]
Length = 2088
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1957 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 2011
>gi|402852746|ref|XP_003891074.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 isoform 1
[Papio anubis]
Length = 1954
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1823 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1877
>gi|380787663|gb|AFE65707.1| chromodomain-helicase-DNA-binding protein 5 [Macaca mulatta]
Length = 1954
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1823 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1877
>gi|344282967|ref|XP_003413244.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Loxodonta
africana]
Length = 2101
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1847 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1901
>gi|24308089|ref|NP_056372.1| chromodomain-helicase-DNA-binding protein 5 [Homo sapiens]
gi|51701343|sp|Q8TDI0.1|CHD5_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 5;
Short=CHD-5; AltName: Full=ATP-dependent helicase CHD5
gi|19773960|gb|AAL98962.1|AF425231_1 chromodomain helicase DNA binding protein 5 [Homo sapiens]
gi|119591922|gb|EAW71516.1| chromodomain helicase DNA binding protein 5 [Homo sapiens]
gi|148922387|gb|AAI46382.1| Chromodomain helicase DNA binding protein 5 [synthetic construct]
gi|151555557|gb|AAI48804.1| Chromodomain helicase DNA binding protein 5 [synthetic construct]
gi|261857536|dbj|BAI45290.1| Chromodomain-helicase-DNA-binding protein 5 [synthetic construct]
Length = 1954
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1823 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1877
>gi|444728247|gb|ELW68711.1| Chromodomain-helicase-DNA-binding protein 5 [Tupaia chinensis]
Length = 2128
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1811 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1865
>gi|402852748|ref|XP_003891075.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 isoform 2
[Papio anubis]
Length = 1951
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1823 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1877
>gi|397503175|ref|XP_003822207.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Pan paniscus]
Length = 1957
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1826 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1880
>gi|395526186|ref|XP_003765249.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Sarcophilus
harrisii]
Length = 2043
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/52 (76%), Positives = 43/52 (82%), Gaps = 2/52 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDED 50
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D
Sbjct: 1820 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKAD 1871
>gi|301616286|ref|XP_002937591.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like [Xenopus
(Silurana) tropicalis]
Length = 1906
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHKV+ EE+L D D R
Sbjct: 1741 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR 1795
>gi|339242107|ref|XP_003376979.1| domain protein, SNF2 family [Trichinella spiralis]
gi|316974280|gb|EFV57776.1| domain protein, SNF2 family [Trichinella spiralis]
Length = 2137
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
M+LN RF EVECLAESHQHLS+ESL+GN+PANAVL KV+ EE+L+D D R
Sbjct: 1906 MALNMRFSEVECLAESHQHLSRESLSGNRPANAVLFKVLNQLEELLNDMKSDVSR 1960
>gi|350585553|ref|XP_003356187.2| PREDICTED: probable G-protein coupled receptor 153-like [Sus
scrofa]
Length = 727
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/37 (91%), Positives = 35/37 (94%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHK 37
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHK
Sbjct: 497 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHK 533
>gi|149049422|gb|EDM01876.1| chromodomain helicase DNA binding protein 4, isoform CRA_e [Rattus
norvegicus]
Length = 940
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/37 (89%), Positives = 35/37 (94%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHK 37
M+LN RF EVECLAESHQHLSKES+AGNKPANAVLHK
Sbjct: 881 MALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHK 917
>gi|355678671|gb|AER96180.1| chromodomain helicase DNA binding protein 3 [Mustela putorius furo]
Length = 1740
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/38 (89%), Positives = 36/38 (94%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKV 38
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHKV
Sbjct: 1703 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKV 1740
>gi|449683391|ref|XP_002153791.2| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Hydra
magnipapillata]
Length = 1699
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 38/41 (92%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVVAE 41
MSL +RF E+ECLAESHQHLSKESL+GNKPANAVLHKV+ +
Sbjct: 1573 MSLQSRFAELECLAESHQHLSKESLSGNKPANAVLHKVLNQ 1613
>gi|47204500|emb|CAG14184.1| unnamed protein product [Tetraodon nigroviridis]
Length = 559
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/37 (89%), Positives = 35/37 (94%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHK 37
M+LN RF EVECLAESHQHLSKESL+GNKPANAVLHK
Sbjct: 392 MALNTRFTEVECLAESHQHLSKESLSGNKPANAVLHK 428
>gi|47221566|emb|CAF97831.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1989
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/37 (86%), Positives = 35/37 (94%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHK 37
M+LN RF EVECLAESHQHLSKES++GNKPANAVLHK
Sbjct: 1862 MALNTRFSEVECLAESHQHLSKESMSGNKPANAVLHK 1898
>gi|417413984|gb|JAA53300.1| Putative chromatin remodeling complex wstf-iswi small subunit,
partial [Desmodus rotundus]
Length = 1846
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/37 (89%), Positives = 35/37 (94%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHK 37
M+L+ARF E ECLAESHQHLSKESLAGNKPANAVLHK
Sbjct: 1794 MALHARFAEAECLAESHQHLSKESLAGNKPANAVLHK 1830
>gi|395731282|ref|XP_002811619.2| PREDICTED: chromodomain-helicase-DNA-binding protein 5, partial
[Pongo abelii]
Length = 1588
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/37 (91%), Positives = 35/37 (94%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHK 37
M+LNAR EVECLAESHQHLSKESLAGNKPANAVLHK
Sbjct: 1462 MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHK 1498
>gi|410979901|ref|XP_003996319.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 3 [Felis catus]
Length = 2100
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 44/63 (69%), Gaps = 10/63 (15%)
Query: 1 MSLNARFGEVECLAESHQHLSKE--------SLAGNKPANAVLHKVV--AEEVLDDEDED 50
M+L+ARF E ECLAESHQHLSKE SLAGNKPANAVLHKV+ EE+L D D
Sbjct: 1919 MALHARFAEAECLAESHQHLSKERXXXXXXXSLAGNKPANAVLHKVLNQLEELLSDMKAD 1978
Query: 51 DDR 53
R
Sbjct: 1979 VTR 1981
>gi|324499809|gb|ADY39928.1| Chromodomain-helicase-DNA-binding protein 3 [Ascaris suum]
Length = 1844
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/53 (60%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
Query: 3 LNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
LN RF ++ECLAESHQHL++E + GNK ANAVLHKV+ EE+L D D R
Sbjct: 1629 LNERFADIECLAESHQHLAREGMQGNKNANAVLHKVLNQLEELLSDMKADVSR 1681
>gi|426238820|ref|XP_004013342.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 3 [Ovis aries]
Length = 2020
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 39/56 (69%), Gaps = 3/56 (5%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV---AEEVLDDEDEDDDR 53
M+L+ARF E ECLAESHQHLSKESLAG++P+ +V V EE+L D D R
Sbjct: 1846 MALHARFAEAECLAESHQHLSKESLAGSRPSFSVARAPVLNQLEELLSDMKADVTR 1901
>gi|402578808|gb|EJW72761.1| hypothetical protein WUBG_16331, partial [Wuchereria bancrofti]
Length = 252
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 38/51 (74%), Gaps = 2/51 (3%)
Query: 3 LNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVVAEEVLDDEDEDDDR 53
LN RF ++ECLAESHQHL++E + GNK A+AVL+++ EE+L D D R
Sbjct: 75 LNERFADIECLAESHQHLAREGMQGNKNASAVLNQL--EELLSDMKADVSR 123
>gi|170592228|ref|XP_001900871.1| CHD4 protein [Brugia malayi]
gi|158591738|gb|EDP30342.1| CHD4 protein, putative [Brugia malayi]
Length = 1846
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 38/51 (74%), Gaps = 2/51 (3%)
Query: 3 LNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVVAEEVLDDEDEDDDR 53
LN RF ++ECLAESHQHL++E + GNK A+AVL+++ EE+L D D R
Sbjct: 1622 LNERFADIECLAESHQHLAREGMQGNKNASAVLNQL--EELLSDMKADVSR 1670
>gi|312077956|ref|XP_003141528.1| CHromoDomain protein family member [Loa loa]
Length = 1696
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 38/51 (74%), Gaps = 2/51 (3%)
Query: 3 LNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVVAEEVLDDEDEDDDR 53
LN RF ++ECLAESHQHL++E + G+K A+AVL+++ EE+L D D R
Sbjct: 1477 LNERFADIECLAESHQHLAREGMQGSKNASAVLNQL--EELLSDMKADVSR 1525
>gi|393911013|gb|EJD76123.1| LET-418 protein [Loa loa]
Length = 1755
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 38/51 (74%), Gaps = 2/51 (3%)
Query: 3 LNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVVAEEVLDDEDEDDDR 53
LN RF ++ECLAESHQHL++E + G+K A+AVL+++ EE+L D D R
Sbjct: 1536 LNERFADIECLAESHQHLAREGMQGSKNASAVLNQL--EELLSDMKADVSR 1584
>gi|47227437|emb|CAG04585.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2248
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/25 (88%), Positives = 23/25 (92%)
Query: 1 MSLNARFGEVECLAESHQHLSKESL 25
M+LNARF EVECLAESHQHLSKES
Sbjct: 1848 MALNARFAEVECLAESHQHLSKESW 1872
>gi|256052547|ref|XP_002569826.1| chromodomain helicase DNA binding protein [Schistosoma mansoni]
gi|353229870|emb|CCD76041.1| putative chromodomain helicase DNA binding protein [Schistosoma
mansoni]
Length = 1966
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 2 SLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVVA--EEVLDDEDED 50
SLN RF E+ECLA HL ++LAGNK +LHKV+ E++L D +D
Sbjct: 1849 SLNRRFTELECLATGQLHLFNDALAGNKALVPLLHKVLTLMEDILVDMKQD 1899
>gi|341900249|gb|EGT56184.1| hypothetical protein CAEBREN_32223 [Caenorhabditis brenneri]
Length = 1816
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 3 LNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVVAE--EVLDDEDEDDDR 53
L RF ++E +AES +++KES AGN+ ANAVLHK + + E+L D D R
Sbjct: 1651 LAQRFADLENIAESQANMAKESAAGNRNANAVLHKCLVQLDEILTDMKSDVSR 1703
>gi|268557732|ref|XP_002636856.1| C. briggsae CBR-LET-418 protein [Caenorhabditis briggsae]
Length = 1849
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 3 LNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVVAE--EVLDD 46
L RF ++E +AES +++KES AGN+ ANAVLHK + + E+L D
Sbjct: 1647 LAQRFADLENIAESQANIAKESAAGNRNANAVLHKCLVQLDEILSD 1692
>gi|341891282|gb|EGT47217.1| CBN-LET-418 protein [Caenorhabditis brenneri]
Length = 1835
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 3 LNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVVAE--EVLDDEDEDDDR 53
L RF ++E +AES +++KES AGN+ ANAVLHK + + E+L D D R
Sbjct: 1635 LAQRFADLENIAESQANMAKESAAGNRNANAVLHKCLVQLDEILTDMKSDVSR 1687
>gi|308501284|ref|XP_003112827.1| CRE-LET-418 protein [Caenorhabditis remanei]
gi|308267395|gb|EFP11348.1| CRE-LET-418 protein [Caenorhabditis remanei]
Length = 1884
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 3 LNARFGEVECLAESHQHLSKESLAGNKPANAVLHK--VVAEEVLDDEDEDDDR 53
L RF ++E +AES +++KES AGN+ ANAVLHK V +E+L D D R
Sbjct: 1638 LAQRFADLENIAESQANIAKESAAGNRNANAVLHKCLVQLDEILSDMKADVSR 1690
>gi|17562600|ref|NP_504523.1| Protein LET-418 [Caenorhabditis elegans]
gi|403399446|sp|G5EBZ4.1|LE418_CAEEL RecName: Full=Protein let-418; AltName: Full=Lethal protein 418
gi|11095333|gb|AAG29838.1| LET-418 [Caenorhabditis elegans]
gi|351020697|emb|CCD62685.1| Protein LET-418 [Caenorhabditis elegans]
Length = 1829
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 3 LNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVVAE--EVLDD 46
L RF ++E +AES +++KES AGN+ ANAVLHK + + E+L D
Sbjct: 1620 LAQRFADLENIAESQANIAKESSAGNRNANAVLHKTLVQLDEILSD 1665
>gi|292606963|gb|ADE34162.1| chromodomain helicase DNA-binding protein 4 [Schmidtea mediterranea]
Length = 1868
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 2 SLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVVA--EEVLDDEDEDDDR 53
+LN RF E+ECLA S Q++ E++ GNK VLH+V+ E++L D +D R
Sbjct: 1732 NLNRRFTELECLATSQQNVYTEAVQGNKTLVPVLHRVLTQLEDLLSDMKQDVAR 1785
>gi|322799750|gb|EFZ20955.1| hypothetical protein SINV_08419 [Solenopsis invicta]
Length = 385
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 29/40 (72%), Gaps = 7/40 (17%)
Query: 55 KRRSRGGGRKKGSMGKKAGASTSKVPTLKIKLGKRKQASS 94
KR+SRG KKG KKA SKVPTLKIKLGKRK+ SS
Sbjct: 249 KRKSRGSRAKKG---KKA----SKVPTLKIKLGKRKRGSS 281
>gi|358339541|dbj|GAA47583.1| chromodomain-helicase-DNA-binding protein 4 [Clonorchis sinensis]
Length = 1670
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 2 SLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVVA--EEVLDDEDEDDDR 53
+LN RF E+EC+A Q L ++LAGNK +L KV+ E++L D +D R
Sbjct: 1566 NLNRRFCELECMATGQQQLFNDALAGNKSLVPLLLKVLTAMEDLLADMKQDVTR 1619
>gi|190352253|gb|ACE76522.1| CHD3-like protein [Sus scrofa]
Length = 177
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/20 (80%), Positives = 18/20 (90%)
Query: 1 MSLNARFGEVECLAESHQHL 20
M+L+ARF E ECLAESHQHL
Sbjct: 158 MALHARFAEAECLAESHQHL 177
>gi|17569817|ref|NP_510140.1| Protein CHD-3 [Caenorhabditis elegans]
gi|6165993|sp|Q22516.2|CHD3_CAEEL RecName: Full=Chromodomain-helicase-DNA-binding protein 3 homolog;
Short=CHD-3
gi|3879819|emb|CAA91810.1| Protein CHD-3 [Caenorhabditis elegans]
gi|11095331|gb|AAG29837.1| CHD-3 [Caenorhabditis elegans]
Length = 1787
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 3 LNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVVAEEVLDD 46
L F E+E A++H ++++ES GN+ ANA+LHK +A+ LDD
Sbjct: 1609 LAQHFSELEHTADAHVNIARESNNGNRNANAILHKCLAQ--LDD 1650
>gi|313247391|emb|CBY15642.1| unnamed protein product [Oikopleura dioica]
Length = 1498
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVVAE-EVLDDEDEDD 51
MSL+ FG++E LAE+H+ L K + GNK A VL KV+ + E L E ++D
Sbjct: 1360 MSLSNHFGQLETLAETHRLLPKIASDGNKAAAHVLLKVLEQMETLLSEMKND 1411
>gi|17137520|ref|NP_477340.1| glass bottom boat [Drosophila melanogaster]
gi|112828|sp|P27091.1|60A_DROME RecName: Full=Protein 60A; AltName: Full=Protein glass bottom boat;
Flags: Precursor
gi|156728|gb|AAA28306.1| 'precursor TGF-B-like protein from 60A gene'; Potential
glycosylation sites are located at positions 421-429,
1117-1125, and 1153-1161 [Drosophila melanogaster]
gi|156730|gb|AAA28307.1| 60A protein [Drosophila melanogaster]
gi|7291653|gb|AAF47075.1| glass bottom boat [Drosophila melanogaster]
Length = 455
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 13 LAESHQHLSKESLAGNKPANAVL----HKVVAEEVLDDEDEDDDRSK-RRSR 59
+AE HLS L+ K A L H++ AEE L D+DEDDD + RSR
Sbjct: 74 IAERPTHLSSHQLSLRKSAPKFLLDVYHRITAEEGLSDQDEDDDYERGHRSR 125
>gi|440906808|gb|ELR57029.1| Chromodomain-helicase-DNA-binding protein 3, partial [Bos grunniens
mutus]
Length = 1940
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 23 ESLAGNKPANAVLHKVV--AEEVLDDEDEDDDR 53
ESLAG KPANAVLHKV+ EE+L D D R
Sbjct: 1789 ESLAGKKPANAVLHKVLNQLEELLSDMKADVTR 1821
>gi|340380649|ref|XP_003388834.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 homolog
[Amphimedon queenslandica]
Length = 1451
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 1 MSLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEVLDDEDED 50
M L++RF +++CLA+ HQ L K+ L G+K ++ K + EE+L + +D
Sbjct: 1208 MLLHSRFTDLDCLADGHQSLVKDCLNGSKYNVLLMRKALGKMEEILLEMKQD 1259
>gi|195489336|ref|XP_002092693.1| GE14331 [Drosophila yakuba]
gi|194178794|gb|EDW92405.1| GE14331 [Drosophila yakuba]
Length = 456
Score = 34.7 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Query: 13 LAESHQHLSKESLAGNKPANAVL----HKVVAEEVLDDEDEDD--DRSKRRSR 59
+AE HLS L+ K A L H++ AEE L D+DEDD +R R R
Sbjct: 74 IAERPTHLSSHQLSLRKSAPKFLLDVYHRITAEEGLSDQDEDDSYERGHRARR 126
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.307 0.125 0.333
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,450,143,139
Number of Sequences: 23463169
Number of extensions: 54944642
Number of successful extensions: 312814
Number of sequences better than 100.0: 398
Number of HSP's better than 100.0 without gapping: 324
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 311769
Number of HSP's gapped (non-prelim): 875
length of query: 99
length of database: 8,064,228,071
effective HSP length: 68
effective length of query: 31
effective length of database: 6,468,732,579
effective search space: 200530709949
effective search space used: 200530709949
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 69 (31.2 bits)