Query psy10455
Match_columns 99
No_of_seqs 31 out of 33
Neff 2.8
Searched_HMMs 13730
Date Fri Aug 16 18:39:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10455.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/10455hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1sqga1 a.79.1.3 (A:5-144) Rib 41.2 5.2 0.00038 25.2 1.5 22 31-52 114-137 (140)
2 d1pmta2 c.47.1.5 (A:1-80) Clas 18.4 20 0.0015 20.1 1.1 12 73-84 46-57 (80)
3 d1f2ea2 c.47.1.5 (A:1-80) Clas 16.9 23 0.0017 19.9 1.1 11 74-84 47-57 (80)
4 d1g7oa2 c.47.1.5 (A:1-75) Glut 15.2 30 0.0022 19.3 1.3 10 75-84 44-53 (75)
5 d2ixoa1 a.268.1.1 (A:2-317) Se 14.9 34 0.0025 25.4 1.9 48 7-54 73-127 (316)
6 d1n2aa2 c.47.1.5 (A:1-80) Clas 14.1 30 0.0022 19.2 1.1 11 74-84 47-57 (80)
7 d1aw9a2 c.47.1.5 (A:2-82) Clas 13.2 37 0.0027 18.9 1.3 12 73-84 48-59 (81)
8 d1v2aa2 c.47.1.5 (A:1-83) Clas 12.2 41 0.003 18.7 1.3 10 75-84 47-56 (83)
9 d1am9a_ a.38.1.1 (A:) SREBP-1a 11.7 34 0.0025 19.6 0.8 34 2-43 20-55 (80)
10 d1nhya2 c.47.1.5 (A:1-75) GST- 11.5 38 0.0028 19.2 1.0 21 27-47 8-28 (75)
No 1
>d1sqga1 a.79.1.3 (A:5-144) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=41.17 E-value=5.2 Score=25.19 Aligned_cols=22 Identities=32% Similarity=0.456 Sum_probs=18.4
Q ss_pred chhhhHHHH--HHhhhcccccchh
Q psy10455 31 ANAVLHKVV--AEEVLDDEDEDDD 52 (99)
Q Consensus 31 an~vLhKvL--lEeLLdDEKdDvd 52 (99)
.|+||++++ .++++++.+.++.
T Consensus 114 VNaVLr~~~r~~~~~~~~~~~~~~ 137 (140)
T d1sqga1 114 INGVLRQFQRQQEELLAEFNASDA 137 (140)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSGG
T ss_pred hHHHHHHHHhCcHHHHHhhccccc
Confidence 599999999 8999988777654
No 2
>d1pmta2 c.47.1.5 (A:1-80) Class beta GST {Proteus mirabilis [TaxId: 584]}
Probab=18.40 E-value=20 Score=20.10 Aligned_cols=12 Identities=25% Similarity=0.470 Sum_probs=9.4
Q ss_pred CCCCCCCCceee
Q psy10455 73 GASTSKVPTLKI 84 (99)
Q Consensus 73 ~~~~~kvptlki 84 (99)
-.|.++||+|.+
T Consensus 46 ~nP~g~vP~L~~ 57 (80)
T d1pmta2 46 INPKGQVPVLQL 57 (80)
T ss_dssp TCTTCCSCEEEC
T ss_pred hcccccCCceec
Confidence 346789999986
No 3
>d1f2ea2 c.47.1.5 (A:1-80) Class beta GST {Sphingomonas paucimobilis [TaxId: 13689]}
Probab=16.94 E-value=23 Score=19.91 Aligned_cols=11 Identities=36% Similarity=0.718 Sum_probs=8.7
Q ss_pred CCCCCCCceee
Q psy10455 74 ASTSKVPTLKI 84 (99)
Q Consensus 74 ~~~~kvptlki 84 (99)
-|.++||+|.+
T Consensus 47 nP~g~vP~L~~ 57 (80)
T d1f2ea2 47 NPSGKVPALTL 57 (80)
T ss_dssp CTTCCSCEEEC
T ss_pred hhccccceEEE
Confidence 35788999976
No 4
>d1g7oa2 c.47.1.5 (A:1-75) Glutaredoxin 2 {Escherichia coli [TaxId: 562]}
Probab=15.24 E-value=30 Score=19.30 Aligned_cols=10 Identities=30% Similarity=0.527 Sum_probs=8.0
Q ss_pred CCCCCCceee
Q psy10455 75 STSKVPTLKI 84 (99)
Q Consensus 75 ~~~kvptlki 84 (99)
|.++||+|.+
T Consensus 44 p~~~VP~L~~ 53 (75)
T d1g7oa2 44 GQKQVPILQK 53 (75)
T ss_dssp SSSCCCEEEE
T ss_pred CCCceEEEEE
Confidence 3678999976
No 5
>d2ixoa1 a.268.1.1 (A:2-317) Serine/threonine-protein phosphatase 2A regulatory subunit B', PTPA {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=14.92 E-value=34 Score=25.38 Aligned_cols=48 Identities=21% Similarity=0.199 Sum_probs=30.9
Q ss_pred cchhhhhhhhcchhhhhhhcCCCCchhhhHHHH------HHhhhccc-ccchhhh
Q psy10455 7 FGEVECLAESHQHLSKESLAGNKPANAVLHKVV------AEEVLDDE-DEDDDRS 54 (99)
Q Consensus 7 FaelEclA~sh~~l~kes~aGnk~an~vLhKvL------lEeLLdDE-KdDvdRl 54 (99)
|..||.+.+.+-.+..-++-||++-..-..++. ++++|+.+ .+.+.++
T Consensus 73 Ld~L~~li~e~PP~~~~~RFGN~AfR~w~~~l~~~~~~ll~~~lp~~~~~~~~El 127 (316)
T d2ixoa1 73 LDKLAHLIDETPPLPGPRRYGNLACREWHHKLDERLPQWLQEMLPSEYHEVVPEL 127 (316)
T ss_dssp HHHHHHTTTTSCCCCC---CCCSHHHHHHHHHHHHHHHHHHHHSCGGGGGGHHHH
T ss_pred HHHHHHHHHhCCCCCCCcccCcHHHHHHHHHHHHHHHHHHHHHcCcchhhhHHHH
Confidence 567888888888887777889998877777765 55555555 3344443
No 6
>d1n2aa2 c.47.1.5 (A:1-80) Class beta GST {Escherichia coli [TaxId: 562]}
Probab=14.13 E-value=30 Score=19.23 Aligned_cols=11 Identities=27% Similarity=0.558 Sum_probs=8.6
Q ss_pred CCCCCCCceee
Q psy10455 74 ASTSKVPTLKI 84 (99)
Q Consensus 74 ~~~~kvptlki 84 (99)
.|.++||+|.+
T Consensus 47 nP~g~vP~L~~ 57 (80)
T d1n2aa2 47 NPKGQVPALLL 57 (80)
T ss_dssp CTTCCSCEEEC
T ss_pred hcccceeeEEe
Confidence 45788999975
No 7
>d1aw9a2 c.47.1.5 (A:2-82) Class phi GST {Maize (Zea mays), type III [TaxId: 4577]}
Probab=13.18 E-value=37 Score=18.94 Aligned_cols=12 Identities=17% Similarity=0.146 Sum_probs=9.5
Q ss_pred CCCCCCCCceee
Q psy10455 73 GASTSKVPTLKI 84 (99)
Q Consensus 73 ~~~~~kvptlki 84 (99)
-.|.++||+|..
T Consensus 48 ~nP~g~vP~L~~ 59 (81)
T d1aw9a2 48 LNPFGQIPALVD 59 (81)
T ss_dssp TCTTCCSCEEEE
T ss_pred HhhcCeeEEEEE
Confidence 456889999975
No 8
>d1v2aa2 c.47.1.5 (A:1-83) Class delta GST {Mosquito (Anopheles dirus b), isozyme 1-6 [TaxId: 123217]}
Probab=12.17 E-value=41 Score=18.73 Aligned_cols=10 Identities=30% Similarity=0.401 Sum_probs=7.9
Q ss_pred CCCCCCceee
Q psy10455 75 STSKVPTLKI 84 (99)
Q Consensus 75 ~~~kvptlki 84 (99)
|.++||+|.+
T Consensus 47 P~g~VP~L~~ 56 (83)
T d1v2aa2 47 PQHTIPTLVD 56 (83)
T ss_dssp TTCCSCEEEE
T ss_pred hccCCCEEEE
Confidence 4678999975
No 9
>d1am9a_ a.38.1.1 (A:) SREBP-1a {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.73 E-value=34 Score=19.60 Aligned_cols=34 Identities=24% Similarity=0.261 Sum_probs=23.3
Q ss_pred ccccccchhhhhhhhcchhhhhhhcCCCCchhhhHHHH--HHhh
Q psy10455 2 SLNARFGEVECLAESHQHLSKESLAGNKPANAVLHKVV--AEEV 43 (99)
Q Consensus 2 ~L~~rFaelEclA~sh~~l~kes~aGnk~an~vLhKvL--lEeL 43 (99)
.||..|.+|..|.++. .+.-+-..||.++. +.+|
T Consensus 20 ~in~~~~~L~~llP~~--------~~k~~K~~iL~~a~~yI~~L 55 (80)
T d1am9a_ 20 SINDKIIELKDLVVGT--------EAKLNKSAVLRKAIDYIRFL 55 (80)
T ss_dssp HHHHHHHHHHHHHTCS--------SCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCC--------CCCCCHHHHHHHHHHHHHHH
Confidence 4788999999998752 22334567888887 4444
No 10
>d1nhya2 c.47.1.5 (A:1-75) GST-like domain of elongation factor 1-gamma {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=11.53 E-value=38 Score=19.21 Aligned_cols=21 Identities=10% Similarity=-0.008 Sum_probs=12.0
Q ss_pred CCCCchhhhHHHHHHhhhccc
Q psy10455 27 GNKPANAVLHKVVAEEVLDDE 47 (99)
Q Consensus 27 Gnk~an~vLhKvLlEeLLdDE 47 (99)
++..++.++-.+++.++=-|-
T Consensus 8 ~~~~~rs~~~~~~l~~~~~d~ 28 (75)
T d1nhya2 8 ANFRIRTWVPRGLVKALKLDV 28 (75)
T ss_dssp CCSSHHHHHHHHHHHHHTCCC
T ss_pred cCCCchHHHHHHHHHhcCccc
Confidence 344566777777765554333
Done!