RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy10455
         (99 letters)



>d1m4za_ b.34.12.1 (A:) Origin-recognition complex protein 120kDa
          subunit, Orc1p {Baker's yeast (Saccharomyces
          cerevisiae) [TaxId: 4932]}
          Length = 217

 Score = 23.0 bits (49), Expect = 7.7
 Identities = 4/28 (14%), Positives = 8/28 (28%)

Query: 41 EEVLDDEDEDDDRSKRRSRGGGRKKGSM 68
          E +  DE  +     ++       K   
Sbjct: 15 EIITTDEQGNIIDGGQKRLRRRGAKTEH 42


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.307    0.125    0.333 

Gapped
Lambda     K      H
   0.267   0.0567    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 317,429
Number of extensions: 12490
Number of successful extensions: 20
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 7
Length of query: 99
Length of database: 2,407,596
Length adjustment: 61
Effective length of query: 38
Effective length of database: 1,570,066
Effective search space: 59662508
Effective search space used: 59662508
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 47 (22.2 bits)