BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10457
(508 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C0D7|ZC12C_HUMAN Probable ribonuclease ZC3H12C OS=Homo sapiens GN=ZC3H12C PE=1 SV=2
Length = 883
Score = 335 bits (860), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 166/315 (52%), Positives = 218/315 (69%), Gaps = 32/315 (10%)
Query: 29 LEPATPHESLSRQSTAEYDPG----YSARVDFALKLGYTEDLVQTALNKLGPNPSHNELL 84
L+ P ES + A+ P Y +++FALKLGY+E+ VQ LNKLG + N++L
Sbjct: 137 LQDFKPEESQTTSKEAKKPPDVVREYQTKLEFALKLGYSEEQVQLVLNKLGTDALINDIL 196
Query: 85 AELIKLGAQVP--------------TSFIQDNE-----QDCMPYPQAKLRPVVIDGSNVA 125
EL+KLG + TS ++ Q+ + LRP+VIDGSNVA
Sbjct: 197 GELVKLGNKSEADQTVSTINTITRETSSLESQRSESPMQEIVTDDGENLRPIVIDGSNVA 256
Query: 126 MSHGNKELFSCIGIKICVDWFRARGHKEITVFVPKWRKESCRPDNLIKNQEVLSELEKDR 185
MSHGNKE+FSC GIK+ VDWF RGHK+ITVFVP WRKE RPD LI +QE+L +LEK++
Sbjct: 257 MSHGNKEVFSCRGIKLAVDWFLERGHKDITVFVPAWRKEQSRPDALITDQEILRKLEKEK 316
Query: 186 ILVYTPSRLIGGKRLVCYDDRFILRLAADTDGIVVSNDNYRDLCLESPDFRKVVEDRILM 245
ILV+TPSR + G+R+VCYDDRFI++LA ++DGI+VSNDNYRDL E P+++K +++R+LM
Sbjct: 317 ILVFTPSRRVQGRRVVCYDDRFIVKLAFESDGIIVSNDNYRDLANEKPEWKKFIDERLLM 376
Query: 246 YSFVNDRFMPPEDPLGRSGPSLDKFL-----TIDYKQNSTGAPCPYGRKCTYGSKCKFNH 300
YSFVND+FMPP+DPLGR GPSLD FL ++K+ PCPYG+KCTYG KCK+ H
Sbjct: 377 YSFVNDKFMPPDDPLGRHGPSLDNFLRKKPIVPEHKKQ----PCPYGKKCTYGHKCKYYH 432
Query: 301 PERGPWPHKTVTERL 315
PERG P ++V + L
Sbjct: 433 PERGSQPQRSVADEL 447
>sp|Q5DTV4|ZC12C_MOUSE Probable ribonuclease ZC3H12C OS=Mus musculus GN=Zc3h12c PE=2 SV=2
Length = 884
Score = 335 bits (858), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 161/290 (55%), Positives = 209/290 (72%), Gaps = 28/290 (9%)
Query: 50 YSARVDFALKLGYTEDLVQTALNKLGPNPSHNELLAELIKLGAQVP-------------- 95
Y +++FALKLGY+E+ VQ LNKLG + N++L EL+KLG +
Sbjct: 163 YQTKLEFALKLGYSEEQVQLVLNKLGTDALINDILGELVKLGNKSEADQTVSTINSVMRE 222
Query: 96 TSFIQDNE-----QDCMPYPQAKLRPVVIDGSNVAMSHGNKELFSCIGIKICVDWFRARG 150
TS ++ Q+ + LRPVVIDGSNVAMSHGNKE+FSC GIK+ VDWF RG
Sbjct: 223 TSSLESQRSESPMQEVVVDDGENLRPVVIDGSNVAMSHGNKEVFSCRGIKLAVDWFLERG 282
Query: 151 HKEITVFVPKWRKESCRPDNLIKNQEVLSELEKDRILVYTPSRLIGGKRLVCYDDRFILR 210
HK+ITVFVP WRKE RPD LI +QE+L +LEK++ILV+TPSR + G+R+VCYDDRFI++
Sbjct: 283 HKDITVFVPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVK 342
Query: 211 LAADTDGIVVSNDNYRDLCLESPDFRKVVEDRILMYSFVNDRFMPPEDPLGRSGPSLDKF 270
LA ++DGI+VSNDNYRDL E P+++K +++R+LMYSFVND+FMPP+DPLGR GPSLD F
Sbjct: 343 LAFESDGIIVSNDNYRDLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNF 402
Query: 271 L-----TIDYKQNSTGAPCPYGRKCTYGSKCKFNHPERGPWPHKTVTERL 315
L ++K+ PCPYG+KCTYG KCK+ HPERG P ++V + L
Sbjct: 403 LRKKPIVPEHKKQ----PCPYGKKCTYGHKCKYYHPERGSQPQRSVADEL 448
>sp|Q5HYM0|ZC12B_HUMAN Probable ribonuclease ZC3H12B OS=Homo sapiens GN=ZC3H12B PE=2 SV=2
Length = 825
Score = 331 bits (848), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 166/331 (50%), Positives = 224/331 (67%), Gaps = 41/331 (12%)
Query: 31 PATPHESLSRQSTAEYDPGYSARVDFALKLGYTEDLVQTALNKLGPNPSHNELLAELIKL 90
P+ S+ + + + Y A+++FALKLGY E+ +Q+ LNKLGP N++LAEL++L
Sbjct: 78 PSFSQSSILQDGKLDLEKEYQAKMEFALKLGYAEEQIQSVLNKLGPESLINDVLAELVRL 137
Query: 91 G------AQVPTSFIQ----------------DNEQDCMPYPQAKLRPVVIDGSNVAMSH 128
G Q+ S + ++E D LRPVVIDGSNVAMSH
Sbjct: 138 GNKGDSEGQINLSLLVPRGPSSREIASPELSLEDEIDN----SDNLRPVVIDGSNVAMSH 193
Query: 129 GNKELFSCIGIKICVDWFRARGHKEITVFVPKWRKESCRPDNLIKNQEVLSELEKDRILV 188
GNKE FSC GI++ VDWF +GHK+ITVFVP WRKE RPD I +Q++L +LEK++ILV
Sbjct: 194 GNKEEFSCRGIQLAVDWFLDKGHKDITVFVPAWRKEQSRPDAPITDQDILRKLEKEKILV 253
Query: 189 YTPSRLIGGKRLVCYDDRFILRLAADTDGIVVSNDNYRDLCLESPDFRKVVEDRILMYSF 248
+TPSR + G+R+VCYDDRFI++LA D+DGI+VSNDNYRDL +E P+++K +E+R+LMYSF
Sbjct: 254 FTPSRRVQGRRVVCYDDRFIVKLAFDSDGIIVSNDNYRDLQVEKPEWKKFIEERLLMYSF 313
Query: 249 VNDRFMPPEDPLGRSGPSLDKFL-----TIDYKQNSTGAPCPYGRKCTYGSKCKFNHPER 303
VND+FMPP+DPLGR GPSL+ FL ++K+ PCPYG+KCTYG KCK+ HPER
Sbjct: 314 VNDKFMPPDDPLGRHGPSLENFLRKRPIVPEHKKQ----PCPYGKKCTYGHKCKYYHPER 369
Query: 304 GPWPHKTVTERLMEHAQKQMSEKRQVNKTLS 334
P ++V + L ++S K KT+S
Sbjct: 370 ANQPQRSVADEL------RISAKLSTVKTMS 394
>sp|Q5D1E8|ZC12A_HUMAN Ribonuclease ZC3H12A OS=Homo sapiens GN=ZC3H12A PE=1 SV=1
Length = 599
Score = 304 bits (778), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 154/299 (51%), Positives = 198/299 (66%), Gaps = 40/299 (13%)
Query: 53 RVDFALKLGYTEDLVQTALNKLGPNPSHNELLAELIKLGAQVPTSFIQDNEQDCMPYPQ- 111
+VDF KLGY+ + + L KLG N +L EL+K G T+ ++ + P PQ
Sbjct: 51 KVDFFRKLGYSSTEIHSVLQKLGVQADTNTVLGELVKHG----TATERERQTSPDPCPQL 106
Query: 112 --------------------------AKLRPVVIDGSNVAMSHGNKELFSCIGIKICVDW 145
+ LRPVVIDGSNVAMSHGNKE+FSC GI + V+W
Sbjct: 107 PLVPRGGGTPKAPNLEPPLPEEEKEGSDLRPVVIDGSNVAMSHGNKEVFSCRGILLAVNW 166
Query: 146 FRARGHKEITVFVPKWRKESCRPDNLIKNQEVLSELEKDRILVYTPSRLIGGKRLVCYDD 205
F RGH +ITVFVP WRKE RPD I +Q +L ELEK +ILV+TPSR +GGKR+VCYDD
Sbjct: 167 FLERGHTDITVFVPSWRKEQPRPDVPITDQHILRELEKKKILVFTPSRRVGGKRVVCYDD 226
Query: 206 RFILRLAADTDGIVVSNDNYRDLCLESPDFRKVVEDRILMYSFVNDRFMPPEDPLGRSGP 265
RFI++LA ++DGIVVSND YRDL E ++++ +E+R+LMYSFVND+FMPP+DPLGR GP
Sbjct: 227 RFIVKLAYESDGIVVSNDTYRDLQGERQEWKRFIEERLLMYSFVNDKFMPPDDPLGRHGP 286
Query: 266 SLDKF-----LTIDYKQNSTGAPCPYGRKCTYGSKCKFNHPERGPWPHKTVTERLMEHA 319
SLD F LT+++++ PCPYGRKCTYG KC+F HPER P ++V + L +A
Sbjct: 287 SLDNFLRKKPLTLEHRKQ----PCPYGRKCTYGIKCRFFHPERPSCPQRSVADELRANA 341
>sp|A0JPN4|ZC12A_RAT Ribonuclease ZC3H12A OS=Rattus norvegicus GN=Zc3h12a PE=2 SV=1
Length = 596
Score = 303 bits (775), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 154/299 (51%), Positives = 193/299 (64%), Gaps = 40/299 (13%)
Query: 53 RVDFALKLGYTEDLVQTALNKLGPNPSHNELLAELIKLGAQVPTSFIQDNEQDCM----P 108
+VDF KLGY+ + +AL KLG N +L EL+K G+ E++C P
Sbjct: 51 KVDFFRKLGYSSSEIHSALQKLGVQADTNTVLGELVKHGSA--------TERECQASTDP 102
Query: 109 YPQ---------------------------AKLRPVVIDGSNVAMSHGNKELFSCIGIKI 141
PQ + LRPVVIDGSNVAMSHGNKE+FSC GI +
Sbjct: 103 CPQPPLVPRGGSTPKPSTVEPSLPEEDKESSDLRPVVIDGSNVAMSHGNKEVFSCRGILL 162
Query: 142 CVDWFRARGHKEITVFVPKWRKESCRPDNLIKNQEVLSELEKDRILVYTPSRLIGGKRLV 201
V+WF RGH +ITVFVP WRKE RPD I +Q +L ELEK +ILV+TPSR +GGKR+V
Sbjct: 163 AVNWFLERGHTDITVFVPSWRKEQPRPDVPITDQHILRELEKKKILVFTPSRRVGGKRVV 222
Query: 202 CYDDRFILRLAADTDGIVVSNDNYRDLCLESPDFRKVVEDRILMYSFVNDRFMPPEDPLG 261
CYDDRFI++LA ++DG+VVSND YRDL E ++++ +E+R+LMYSFVND+FMPP+DPLG
Sbjct: 223 CYDDRFIVKLAYESDGVVVSNDTYRDLQGERQEWKRFIEERLLMYSFVNDKFMPPDDPLG 282
Query: 262 RSGPSLDKFLTID-YKQNSTGAPCPYGRKCTYGSKCKFNHPERGPWPHKTVTERLMEHA 319
R GPSLD FL PCPYGRKCTYG KC+F HPER P ++V + L +A
Sbjct: 283 RHGPSLDNFLRKKPLPSEHRKQPCPYGRKCTYGIKCRFFHPERPSRPQRSVADELRANA 341
>sp|Q5D1E7|ZC12A_MOUSE Ribonuclease ZC3H12A OS=Mus musculus GN=Zc3h12a PE=1 SV=2
Length = 596
Score = 300 bits (767), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 152/299 (50%), Positives = 192/299 (64%), Gaps = 40/299 (13%)
Query: 53 RVDFALKLGYTEDLVQTALNKLGPNPSHNELLAELIKLGAQVPTSFIQDNEQDCM----P 108
+VDF KLGY+ + + L KLG N +L EL+K G+ E++C P
Sbjct: 51 KVDFFRKLGYSSSEIHSVLQKLGVQADTNTVLGELVKHGSA--------TERECQALTAP 102
Query: 109 YPQ---------------------------AKLRPVVIDGSNVAMSHGNKELFSCIGIKI 141
PQ + LRPVVIDGSNVAMSHGNKE+FSC GI +
Sbjct: 103 SPQPPLVPRGGSTPKPSTLEPSLPEEDREGSDLRPVVIDGSNVAMSHGNKEVFSCRGILL 162
Query: 142 CVDWFRARGHKEITVFVPKWRKESCRPDNLIKNQEVLSELEKDRILVYTPSRLIGGKRLV 201
V+WF RGH +ITVFVP WRKE RPD I +Q +L ELEK +ILV+TPSR +GGKR+V
Sbjct: 163 AVNWFLERGHTDITVFVPSWRKEQPRPDVPITDQHILRELEKKKILVFTPSRRVGGKRVV 222
Query: 202 CYDDRFILRLAADTDGIVVSNDNYRDLCLESPDFRKVVEDRILMYSFVNDRFMPPEDPLG 261
CYDDRFI++LA ++DG+VVSND YRDL E ++++ +E+R+LMYSFVND+FMPP+DPLG
Sbjct: 223 CYDDRFIVKLAFESDGVVVSNDTYRDLQGERQEWKRFIEERLLMYSFVNDKFMPPDDPLG 282
Query: 262 RSGPSLDKFLTID-YKQNSTGAPCPYGRKCTYGSKCKFNHPERGPWPHKTVTERLMEHA 319
R GPSLD FL PCPYG+KCTYG KC+F HPER P ++V + L +A
Sbjct: 283 RHGPSLDNFLRKKPLPSEHRKQPCPYGKKCTYGIKCRFFHPERPSRPQRSVADELRANA 341
>sp|A6QQJ8|ZC12A_BOVIN Ribonuclease ZC3H12A OS=Bos taurus GN=ZC3H12A PE=2 SV=1
Length = 583
Score = 299 bits (766), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 152/295 (51%), Positives = 194/295 (65%), Gaps = 32/295 (10%)
Query: 53 RVDFALKLGYTEDLVQTALNKLGPNPSHNELLAELIKLGAQ-----------------VP 95
+VDF KLGY+ + + L KLG N +L EL+K G+ VP
Sbjct: 35 KVDFFRKLGYSSAEIHSVLQKLGIQADTNTVLGELVKHGSAAERERQASPDPCPQLPLVP 94
Query: 96 TSFIQDNEQDCMPYP------QAKLRPVVIDGSNVAMSHGNKELFSCIGIKICVDWFRAR 149
YP + LRP+VIDGSNVAMSHGNK++FSC GI + V+WF R
Sbjct: 95 RGGGTPKAPTVETYPPEEDKEGSDLRPIVIDGSNVAMSHGNKDVFSCRGILLAVNWFLER 154
Query: 150 GHKEITVFVPKWRKESCRPDNLIKNQEVLSELEKDRILVYTPSRLIGGKRLVCYDDRFIL 209
GH +ITVFVP WRKE RPD I +Q +L +LEK +ILV+TPSR +GGKR+VCYDDRFI+
Sbjct: 155 GHTDITVFVPSWRKEQPRPDVPITDQHILRDLEKKKILVFTPSRRVGGKRVVCYDDRFIV 214
Query: 210 RLAADTDGIVVSNDNYRDLCLESPDFRKVVEDRILMYSFVNDRFMPPEDPLGRSGPSLDK 269
+LA ++DGIVVSND YRDL E ++++ +E+R+LMYSFVND+FMPP+DPLGR GPSLD
Sbjct: 215 KLAFESDGIVVSNDTYRDLQGERQEWKRFIEERLLMYSFVNDKFMPPDDPLGRHGPSLDN 274
Query: 270 F-----LTIDYKQNSTGAPCPYGRKCTYGSKCKFNHPERGPWPHKTVTERLMEHA 319
F LT ++K+ PCPYGRKCTYG KC+F HPER P ++V + L +A
Sbjct: 275 FLRKKPLTSEHKKQ----PCPYGRKCTYGIKCRFLHPERPSRPQRSVADELRANA 325
>sp|A2A288|ZC12D_HUMAN Probable ribonuclease ZC3H12D OS=Homo sapiens GN=ZC3H12D PE=2 SV=3
Length = 527
Score = 282 bits (721), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 163/350 (46%), Positives = 213/350 (60%), Gaps = 44/350 (12%)
Query: 52 ARVDFALKLGYTEDLVQTALNKLGPNPSHNELLAELIKLGAQ------------------ 93
++++F KLGY + V L KLG N++L ELI+ G++
Sbjct: 5 SKMEFFQKLGYDREDVLRVLGKLGEGALVNDVLQELIRTGSRPGALEHPAAPRLVPRGSC 64
Query: 94 -VPTSFIQDN----EQDCMPYPQAKLRPVVIDGSNVAMSHGNKELFSCIGIKICVDWFRA 148
VP S + E+D + LRP+VIDGSNVAMSHGNKE FSC GIK+ VDWFR
Sbjct: 65 GVPDSAQRGPGTALEEDFRTL-ASSLRPIVIDGSNVAMSHGNKETFSCRGIKLAVDWFRD 123
Query: 149 RGHKEITVFVPKWRKESCRPDNLIKNQEVLSELEKDRILVYTPSRLIGGKRLVCYDDRFI 208
RGH I VFVP WRK+ R D I+ Q VL+ELE+ +LVYTPSR + GKRLVCYDDR+I
Sbjct: 124 RGHTYIKVFVPSWRKDPPRADTPIREQHVLAELERQAVLVYTPSRKVHGKRLVCYDDRYI 183
Query: 209 LRLAADTDGIVVSNDNYRDLCLESPDFRKVVEDRILMYSFVNDRFMPPEDPLGRSGPSLD 268
+++A + DG++VSNDNYRDL E+P+++ +E R+LM+SFVNDRFMPP+DPLGR GPSL
Sbjct: 184 VKVAYEQDGVIVSNDNYRDLQSENPEWKWFIEQRLLMFSFVNDRFMPPDDPLGRHGPSLS 243
Query: 269 KFLTIDYK-QNSTGAPCPYGRKCTYGSKCKFNHPERGPWPHKTVTERLMEHAQKQMSEKR 327
FL+ K + CPYG+KCTYG KCKF HPER PH HAQ ++++
Sbjct: 244 NFLSRKPKPPEPSWQHCPYGKKCTYGIKCKFYHPER---PH---------HAQLAVADEL 291
Query: 328 QVNKTLSCPAVPNQYQHQEQQVTVHPQKTLLSRTRSYAPDSH--PEAHGS 375
+ KT + P +EQ+ P + +R P +H P A GS
Sbjct: 292 RA-KTGARPGA----GAEEQRPPRAPGGSAGARAAPREPFAHSLPPARGS 336
>sp|Q8BIY3|ZC12D_MOUSE Probable ribonuclease ZC3H12D OS=Mus musculus GN=Zc3h12d PE=2 SV=2
Length = 533
Score = 279 bits (714), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 156/352 (44%), Positives = 215/352 (61%), Gaps = 40/352 (11%)
Query: 50 YSARVDFALKLGYTEDLVQTALNKLGPNPSHNELLAELIKLGAQ---------------V 94
+ ++++F KLGY+++ V L KLG + N++L ELI+ G++ +
Sbjct: 3 HRSKMEFFQKLGYSQEDVVRVLGKLGDSALVNDVLQELIQTGSRPRAQEDPASGTGVVLI 62
Query: 95 PTSF--IQDNEQDCMPYPQAK---------LRPVVIDGSNVAMSHGNKELFSCIGIKICV 143
P +QD+ Q P + + LRP+VIDGSNVAMSHGNKE FSC GI++ V
Sbjct: 63 PRGCCGVQDSAQQG-PGTRPRRGWRRSSPLLRPIVIDGSNVAMSHGNKEAFSCRGIRLAV 121
Query: 144 DWFRARGHKEITVFVPKWRKESCRPDNLIKNQEVLSELEKDRILVYTPSRLIGGKRLVCY 203
DWF RGH I VFVP WRKE R D I+ Q VL ELE+ +LVYTPSR + GKR+VCY
Sbjct: 122 DWFTDRGHTYIKVFVPSWRKEPSRSDTPIREQHVLEELERQAVLVYTPSRKVNGKRVVCY 181
Query: 204 DDRFILRLAADTDGIVVSNDNYRDLCLESPDFRKVVEDRILMYSFVNDRFMPPEDPLGRS 263
DDR+I+++A + DGI+VSNDNYRDL E+P+++ +E R+LM+SFVNDRFMPP+DPLGR
Sbjct: 182 DDRYIVKVAYEKDGIIVSNDNYRDLQNENPEWKWFIEQRLLMFSFVNDRFMPPDDPLGRR 241
Query: 264 GPSLDKFLTIDYK-QNSTGAPCPYGRKCTYGSKCKFNHPERGPWPHK---TVTERLMEHA 319
GP+L FL+ + + CPYG+KCTYG KC+F HPER PH +V + L
Sbjct: 242 GPTLSNFLSKKPRPPEPSWQHCPYGKKCTYGVKCRFYHPER---PHHGQLSVADELRAKT 298
Query: 320 QKQMSEKRQVNKTLSCPAVPNQYQHQEQQVTVH-----PQKTLLSR-TRSYA 365
+ + + +T S + P + Q+ H PQ +L+ RS+A
Sbjct: 299 RAWLGGGAEEPRTPSARSRPTTARLLPQEPGEHDLPPAPQPAVLAALNRSFA 350
>sp|Q5ZLE9|N4BP1_CHICK NEDD4-binding protein 1 OS=Gallus gallus GN=N4BP1 PE=2 SV=1
Length = 931
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 113/158 (71%), Gaps = 3/158 (1%)
Query: 114 LRPVVIDGSNVAMSHGNKELFSCIGIKICVDWFRARGHKEITVFVPKWRKESCRPDNLIK 173
L+ ++IDGSNVA+SHG ++ FSC GI I VD+F RGH+ ITVFVP+WR R D I
Sbjct: 659 LKHIIIDGSNVAISHGLRKFFSCRGIAIAVDYFWKRGHRNITVFVPQWR---TRRDPSIT 715
Query: 174 NQEVLSELEKDRILVYTPSRLIGGKRLVCYDDRFILRLAADTDGIVVSNDNYRDLCLESP 233
Q+ L++LE IL TPSR++ G R+ +DDRF+L LA T G++V+NDN+R+ ES
Sbjct: 716 EQDFLTQLEDVGILSLTPSRMVLGARIASHDDRFLLHLADKTGGVIVTNDNFREFVTESL 775
Query: 234 DFRKVVEDRILMYSFVNDRFMPPEDPLGRSGPSLDKFL 271
+R++++ R+L Y+F D FM P+DPLGR+GP LD FL
Sbjct: 776 AWREIIQKRLLQYTFAGDIFMVPDDPLGRNGPRLDDFL 813
>sp|Q7ZXG4|N4BP1_XENLA NEDD4-binding protein 1 OS=Xenopus laevis GN=n4bp1 PE=2 SV=1
Length = 848
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 81/159 (50%), Positives = 114/159 (71%), Gaps = 3/159 (1%)
Query: 114 LRPVVIDGSNVAMSHGNKELFSCIGIKICVDWFRARGHKEITVFVPKWRKESCRPDNLIK 173
L+ ++IDGSNVAMSHG K FSC GI + V++F +GH+ ITVFVP+WR + D I
Sbjct: 516 LKHIIIDGSNVAMSHGLKHFFSCRGIALAVEYFWNKGHRNITVFVPQWR---TKRDPYIT 572
Query: 174 NQEVLSELEKDRILVYTPSRLIGGKRLVCYDDRFILRLAADTDGIVVSNDNYRDLCLESP 233
Q L +L++ IL +TPSR + G R+ +DDRF+L LA T GI+V+NDN+R+ +ESP
Sbjct: 573 EQHFLQQLQELGILSFTPSRTVLGARIASHDDRFLLHLAERTGGIIVTNDNFREFVVESP 632
Query: 234 DFRKVVEDRILMYSFVNDRFMPPEDPLGRSGPSLDKFLT 272
+R+++++R+L Y+F D FM P+DPLGR GP LD FL+
Sbjct: 633 MWREIIKERLLQYTFAGDIFMLPDDPLGRYGPKLDDFLS 671
>sp|Q6DJS0|N4BP1_XENTR NEDD4-binding protein 1 OS=Xenopus tropicalis GN=n4bp1 PE=2 SV=1
Length = 819
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 79/159 (49%), Positives = 114/159 (71%), Gaps = 3/159 (1%)
Query: 114 LRPVVIDGSNVAMSHGNKELFSCIGIKICVDWFRARGHKEITVFVPKWRKESCRPDNLIK 173
L+ ++IDGSNVAMSHG + FSC GI + V++F +GH+ ITVFVP+WR + D I
Sbjct: 517 LKHIIIDGSNVAMSHGLQRFFSCRGIALAVEYFWKKGHRNITVFVPQWR---TKRDPFIT 573
Query: 174 NQEVLSELEKDRILVYTPSRLIGGKRLVCYDDRFILRLAADTDGIVVSNDNYRDLCLESP 233
Q L +L++ IL +TPSR + G R+ +DDRF+L LA T GI+++NDN+R+ +ESP
Sbjct: 574 EQHFLQQLQELGILSFTPSRTVLGARIASHDDRFLLHLAERTGGIIITNDNFREFVVESP 633
Query: 234 DFRKVVEDRILMYSFVNDRFMPPEDPLGRSGPSLDKFLT 272
+R+++++R+L Y+F D FM P+DPLGR GP LD FL+
Sbjct: 634 SWREIIKERLLQYTFAGDIFMLPDDPLGRYGPKLDDFLS 672
>sp|Q1LVK9|N4BP1_DANRE NEDD4-binding protein 1 OS=Danio rerio GN=n4bp1 PE=2 SV=3
Length = 858
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/171 (49%), Positives = 118/171 (69%), Gaps = 7/171 (4%)
Query: 114 LRPVVIDGSNVAMSHGNKELFSCIGIKICVDWFRARGHKEITVFVPKWRKESCRPDNLIK 173
LR ++IDGSNVAM+HG +FSC GI I V+ F RGH+EITVFVP+WR+ + D I
Sbjct: 598 LRHIIIDGSNVAMAHGLHRVFSCRGIAIAVEAFWRRGHREITVFVPQWRQ---KKDPNIT 654
Query: 174 NQEVLSELEKDRILVYTPSRLIGGKRLVCYDDRFILRLAADTDGIVVSNDNYRDLCLESP 233
Q L++LE R+L +TPSR + G R+ +DDRF+L LA T G++V+NDN RD +S
Sbjct: 655 EQHFLNQLENLRLLSFTPSREVCGHRISSHDDRFLLHLAEKTGGVIVTNDNLRDFVSQSE 714
Query: 234 DFRKVVEDRILMYSFVNDRFMPPEDPLGRSGPSLDKFLTIDYKQNSTGAPC 284
+R+++ +R+L ++FV D FM P+DPLG+ GP LD+FL D S G+P
Sbjct: 715 AWRRIIHERLLQFTFVEDHFMIPDDPLGKHGPHLDEFLLKD----SRGSPI 761
>sp|Q6A037|N4BP1_MOUSE NEDD4-binding protein 1 OS=Mus musculus GN=N4bp1 PE=1 SV=2
Length = 893
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 116/161 (72%), Gaps = 3/161 (1%)
Query: 111 QAKLRPVVIDGSNVAMSHGNKELFSCIGIKICVDWFRARGHKEITVFVPKWRKESCRPDN 170
+A L+ +VIDGSNVA++HG K+ FSC GI I V++F G++ ITVFVP+WR R D
Sbjct: 612 RADLKHIVIDGSNVAITHGLKKFFSCRGIAIAVEYFWKLGNRNITVFVPQWR---TRRDP 668
Query: 171 LIKNQEVLSELEKDRILVYTPSRLIGGKRLVCYDDRFILRLAADTDGIVVSNDNYRDLCL 230
I Q L++L++ IL TP+R++ G+R+ +DDRF+L LA T GI+V+NDN+R+
Sbjct: 669 NITEQHFLTQLQELGILSLTPARMVFGERIASHDDRFLLHLADKTGGIIVTNDNFREFVT 728
Query: 231 ESPDFRKVVEDRILMYSFVNDRFMPPEDPLGRSGPSLDKFL 271
ES +R+++ R+L Y+FV D FM P+DPLGR+GP L++FL
Sbjct: 729 ESVSWREIITKRLLQYTFVGDIFMVPDDPLGRNGPRLEEFL 769
>sp|O75113|N4BP1_HUMAN NEDD4-binding protein 1 OS=Homo sapiens GN=N4BP1 PE=1 SV=4
Length = 896
Score = 172 bits (437), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 79/158 (50%), Positives = 114/158 (72%), Gaps = 3/158 (1%)
Query: 114 LRPVVIDGSNVAMSHGNKELFSCIGIKICVDWFRARGHKEITVFVPKWRKESCRPDNLIK 173
L+ +VIDGSNVA++HG K+ FSC GI I V++F G++ ITVFVP+WR R D +
Sbjct: 617 LKHIVIDGSNVAITHGLKKFFSCRGIAIAVEYFWKLGNRNITVFVPQWR---TRRDPNVT 673
Query: 174 NQEVLSELEKDRILVYTPSRLIGGKRLVCYDDRFILRLAADTDGIVVSNDNYRDLCLESP 233
Q L++L++ IL TP+R++ G+R+ +DDRF+L LA T GI+V+NDN+R+ ES
Sbjct: 674 EQHFLTQLQELGILSLTPARMVFGERIASHDDRFLLHLADKTGGIIVTNDNFREFVNESV 733
Query: 234 DFRKVVEDRILMYSFVNDRFMPPEDPLGRSGPSLDKFL 271
+R+++ R+L Y+FV D FM P+DPLGRSGP L++FL
Sbjct: 734 SWREIITKRLLQYTFVGDIFMVPDDPLGRSGPRLEEFL 771
>sp|O15037|KHNYN_HUMAN Protein KHNYN OS=Homo sapiens GN=KHNYN PE=2 SV=3
Length = 678
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/195 (45%), Positives = 125/195 (64%), Gaps = 4/195 (2%)
Query: 111 QAKLRPVVIDGSNVAMSHGNKELFSCIGIKICVDWFRARGHKEITVFVPKWRKESCRPDN 170
Q LR +VIDGSNVAM HG + FS GI I V +F RGH++ITVFVP+WR D
Sbjct: 434 QPDLRHIVIDGSNVAMVHGLQHYFSSRGIAIAVQYFWDRGHRDITVFVPQWRFSK---DA 490
Query: 171 LIKNQEVLSELEKDRILVYTPSRLIGGKRLVCYDDRFILRLAADTDGIVVSNDNYRDLCL 230
++ L +L +L TPSR++ GKR+ YDDRF+++LA +TDGI+VSND +RDL
Sbjct: 491 KVRESHFLQKLYSLSLLSLTPSRVMDGKRISSYDDRFMVKLAEETDGIIVSNDQFRDLAE 550
Query: 231 ESPDFRKVVEDRILMYSFVNDRFMPPEDPLGRSGPSLDKFLTIDYK-QNSTGAPCPYGRK 289
ES + ++ +R+L ++FV + FM P+DPLGR+GP+LD+FL + Q S+ A P
Sbjct: 551 ESEKWMAIIRERLLPFTFVGNLFMVPDDPLGRNGPTLDEFLKKPARTQGSSKAQHPSRGF 610
Query: 290 CTYGSKCKFNHPERG 304
+G + + E+G
Sbjct: 611 AEHGKQQQGREEEKG 625
>sp|Q80U38|KHNYN_MOUSE Protein KHNYN OS=Mus musculus GN=Khnyn PE=2 SV=2
Length = 671
Score = 167 bits (422), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 113/161 (70%), Gaps = 3/161 (1%)
Query: 111 QAKLRPVVIDGSNVAMSHGNKELFSCIGIKICVDWFRARGHKEITVFVPKWRKESCRPDN 170
Q LR +VIDGSNVAM HG + FS GI + V +F RGH++ITVFVP+WR D+
Sbjct: 427 QPDLRHIVIDGSNVAMVHGLQHYFSSRGIALAVQYFWDRGHRDITVFVPQWR---FSKDS 483
Query: 171 LIKNQEVLSELEKDRILVYTPSRLIGGKRLVCYDDRFILRLAADTDGIVVSNDNYRDLCL 230
++ L +L +L TPSR++ GKR+ YDDRF+++LA +TDGI+VSND +RDL
Sbjct: 484 KVRESHFLQKLYSLSLLSLTPSRVMDGKRISSYDDRFMVKLAEETDGIIVSNDQFRDLAE 543
Query: 231 ESPDFRKVVEDRILMYSFVNDRFMPPEDPLGRSGPSLDKFL 271
ES + ++ +R+L ++FV + FM P+DPLGR+GP+LD+FL
Sbjct: 544 ESDKWMAIIRERLLPFTFVGNLFMVPDDPLGRNGPTLDEFL 584
>sp|Q5DTZ0|NYNRI_MOUSE Protein NYNRIN OS=Mus musculus GN=Nynrin PE=1 SV=2
Length = 1840
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 116/189 (61%), Gaps = 13/189 (6%)
Query: 91 GAQVPTSFIQDNEQDCMPYPQ--------AKLRPVVIDGSNVAMSHGNKELFSCIGIKIC 142
G + TSF + NE P+ LR VVIDGS+VAM HG + FSC GI +
Sbjct: 709 GTNIVTSFQRYNEALNTPFEMNLSEEPGNPGLRRVVIDGSSVAMVHGLQHFFSCRGIAMA 768
Query: 143 VDWFRARGHKEITVFVPKWRKESCRPDNLIKNQEVLSELEKDRILVYTPSRLIGGKRLVC 202
V +F RGH+EITVFVP W+ + + ++ L++L + ++L TPS+L GK++
Sbjct: 769 VQYFWNRGHREITVFVPTWQ---LKKNRRVRESHFLTKLHRLKMLSITPSQLENGKKITT 825
Query: 203 YDDRFILRLAADTDGIVVSNDNYRDLCLESPDFRKVVEDRILMYSFVNDRFMPPEDPLGR 262
YD RF+++LA +TDG++V+N+ L S +V+DR+L ++F FM P+DPLGR
Sbjct: 826 YDYRFMVKLAEETDGVIVTNEQIHILMNNSKKL--MVKDRLLPFTFAGSLFMVPDDPLGR 883
Query: 263 SGPSLDKFL 271
GP+L++FL
Sbjct: 884 DGPTLEEFL 892
>sp|Q9P2P1|NYNRI_HUMAN Protein NYNRIN OS=Homo sapiens GN=NYNRIN PE=2 SV=3
Length = 1898
Score = 149 bits (376), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 106/158 (67%), Gaps = 5/158 (3%)
Query: 114 LRPVVIDGSNVAMSHGNKELFSCIGIKICVDWFRARGHKEITVFVPKWRKESCRPDNLIK 173
LR VVIDGS+VAM HG + FSC GI + V +F RGH+E+TVFVP W+ + R ++
Sbjct: 792 LRRVVIDGSSVAMVHGLQHFFSCRGIAMAVQFFWNRGHREVTVFVPTWQLKKNR---RVR 848
Query: 174 NQEVLSELEKDRILVYTPSRLIGGKRLVCYDDRFILRLAADTDGIVVSNDNYRDLCLESP 233
L++L ++L TPS+L GK++ YD RF+++LA +TDGI+V+N+ L S
Sbjct: 849 ESHFLTKLHSLKMLSITPSQLENGKKITTYDYRFMVKLAEETDGIIVTNEQIHILMNSSK 908
Query: 234 DFRKVVEDRILMYSFVNDRFMPPEDPLGRSGPSLDKFL 271
+V+DR+L ++F + FM P+DPLGR GP+LD+FL
Sbjct: 909 KL--MVKDRLLPFTFAGNLFMVPDDPLGRDGPTLDEFL 944
>sp|Q941Q3|C3H37_ARATH Zinc finger CCCH domain-containing protein 37 OS=Arabidopsis
thaliana GN=HUA1 PE=1 SV=1
Length = 524
Score = 33.9 bits (76), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 16/21 (76%), Gaps = 3/21 (14%)
Query: 284 CPY---GRKCTYGSKCKFNHP 301
CPY ++C YGSKCKFNHP
Sbjct: 231 CPYYIKTQRCKYGSKCKFNHP 251
>sp|Q5RJC5|C3H67_ARATH Zinc finger CCCH domain-containing protein 67 OS=Arabidopsis
thaliana GN=At5g63260 PE=2 SV=2
Length = 435
Score = 32.7 bits (73), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 52/138 (37%), Gaps = 17/138 (12%)
Query: 284 CPYGRK---CTYGSKCKFNHPE------------RGPWPHKTVTERLMEHAQKQMSEKRQ 328
CP+ + C +GS CKFNHP+ RG + + + S R
Sbjct: 200 CPFYMRNGSCKFGSDCKFNHPDPTAIGGVDSPLYRGNNGGSFSPKAPSQASSTSWSSTRH 259
Query: 329 VNKTLSCPAVPNQYQHQEQQVTVHPQKTLLSRTRSYAPDSHPEAHGSYSNLSQNSDQGAP 388
+N T + P +P+ + H + +Y P+ P A SY NS
Sbjct: 260 MNGTGTAPFIPSMFPHSRGVTPQASDWNGYQASSAYPPERSPLAPSSYQ--VNNSLAETS 317
Query: 389 LHQRLQRQLSLNPYEEVP 406
+ Q Q+S+ + E P
Sbjct: 318 SFSQYQHQMSVEEFPERP 335
>sp|C0ZXT2|RNH2_RHOE4 Ribonuclease HII OS=Rhodococcus erythropolis (strain PR4 / NBRC
100887) GN=rnhB PE=3 SV=1
Length = 226
Score = 32.3 bits (72), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Query: 45 EYDPGYSARVDFALKLGYTEDLVQTALNKLGPNPSHNELLAELIKLGAQV 94
E PGY FA+ GY+ L AL++LGP P H A ++ G ++
Sbjct: 173 ETHPGYG----FAIHKGYSTPLHMDALDELGPCPEHRMTYANVVAAGVRL 218
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 209,917,093
Number of Sequences: 539616
Number of extensions: 9468249
Number of successful extensions: 26964
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 157
Number of HSP's that attempted gapping in prelim test: 25728
Number of HSP's gapped (non-prelim): 1236
length of query: 508
length of database: 191,569,459
effective HSP length: 122
effective length of query: 386
effective length of database: 125,736,307
effective search space: 48534214502
effective search space used: 48534214502
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)