Your job contains 1 sequence.
>psy10458
MWSFKNVFSFSKALKDPSGNVLSKYFVPSIEYRRLEAQRSILFGTVQSMHHYTLPGQTHF
VIVEMKDSQVTRRILNKCGHLDKSQVIPVRSPFLWFRANKNKTKLSDESDYAKINCDTHN
VFPPTEDHVRECLASCNTITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCAI
FPFGSSVNNFGKLGCDLDLVLQLDLQSQGDNDQCRLMFHCKSSLGSERSQTLRHLETVGD
LLQLFLPGCSQLFLPGCSQVKRILGARVPIIKYNHDMSALECDLSMTNLTALYMAELLYL
FGEIDWRVRPLVFTIKKWAKDINLTNPTPGRWITNFSLTLLVLFYLQSVKVLPPLKLLID
EASLKDRRISEDGVNCTFVRDITKLQFHPSIPEQSTDSLTTLLFGFFEFYSQYDFNNQGI
SLYLGSPIPKPEHGALYINNPLERGLNVSKNVSFEELERLKVEVRNASWTLESTANSNNK
PSHTPSESWGLLELFKKQNLSEKAKSVFFSEKSRPKERMVSVEDLFSTETSEDSQVPVEP
DFKKRKPISAQTLKAVQKAMKTK
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10458
(563 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E2RCU9 - symbol:MTPAP "Uncharacterized protein"... 651 7.6e-64 1
UNIPROTKB|F1MSM5 - symbol:MTPAP "Uncharacterized protein"... 647 2.0e-63 1
MGI|MGI:1914690 - symbol:Mtpap "mitochondrial poly(A) pol... 632 7.9e-62 1
RGD|1310900 - symbol:Mtpap "mitochondrial poly(A) polymer... 632 7.9e-62 1
UNIPROTKB|Q9NVV4 - symbol:MTPAP "Poly(A) RNA polymerase, ... 619 1.9e-60 1
UNIPROTKB|F1NBW0 - symbol:MTPAP "Uncharacterized protein"... 577 5.3e-56 1
UNIPROTKB|F1RPX0 - symbol:TUT1 "Uncharacterized protein" ... 293 8.9e-29 2
UNIPROTKB|Q9H6E5 - symbol:TUT1 "Speckle targeted PIP5K1A-... 298 1.0e-28 2
UNIPROTKB|F5H0R1 - symbol:TUT1 "Speckle targeted PIP5K1A-... 298 1.2e-28 2
UNIPROTKB|D2HS90 - symbol:TUT1 "Speckle targeted PIP5K1A-... 296 1.7e-28 2
UNIPROTKB|F6X6U9 - symbol:MIR3654 "Uncharacterized protei... 293 3.0e-28 2
UNIPROTKB|E2R634 - symbol:TUT1 "Uncharacterized protein" ... 293 3.8e-28 2
RGD|1561043 - symbol:Tut1 "terminal uridylyl transferase ... 287 6.8e-28 2
ZFIN|ZDB-GENE-050706-68 - symbol:tut1 "terminal uridylyl ... 315 2.0e-27 3
MGI|MGI:1917294 - symbol:Tut1 "terminal uridylyl transfer... 289 2.8e-27 2
UNIPROTKB|F1MG03 - symbol:TUT1 "Speckle targeted PIP5K1A-... 283 3.3e-27 2
UNIPROTKB|Q1JPD6 - symbol:TUT1 "Speckle targeted PIP5K1A-... 283 5.3e-27 2
UNIPROTKB|H3BRB1 - symbol:MIR3654 "Protein MIR3654" speci... 249 4.7e-24 2
UNIPROTKB|A9JTS5 - symbol:tut1 "Speckle targeted PIP5K1A-... 241 5.4e-22 2
TAIR|locus:2063937 - symbol:HESO1 "HEN1 suppressor 1" spe... 244 1.2e-17 1
DICTYBASE|DDB_G0278425 - symbol:DDB_G0278425 species:4468... 249 1.4e-17 1
MGI|MGI:2140950 - symbol:Papd4 "PAP associated domain con... 209 6.8e-16 3
RGD|1306438 - symbol:Papd4 "PAP associated domain contain... 208 9.1e-16 3
UNIPROTKB|Q6PIY7 - symbol:PAPD4 "Poly(A) RNA polymerase G... 209 1.1e-15 2
UNIPROTKB|E2RQN5 - symbol:PAPD4 "Uncharacterized protein"... 207 1.9e-15 2
UNIPROTKB|Q2HJ44 - symbol:PAPD4 "Poly(A) RNA polymerase G... 208 3.1e-15 2
UNIPROTKB|F1RF43 - symbol:PAPD4 "Uncharacterized protein"... 205 5.3e-15 2
UNIPROTKB|E9PKY2 - symbol:ZCCHC11 "Terminal uridylyltrans... 212 1.7e-14 2
FB|FBgn0038934 - symbol:Gld2 species:7227 "Drosophila mel... 220 2.8e-14 1
UNIPROTKB|F1PFM0 - symbol:ZCCHC11 "Uncharacterized protei... 209 3.0e-14 2
UNIPROTKB|J9P9X1 - symbol:ZCCHC11 "Uncharacterized protei... 209 3.1e-14 2
UNIPROTKB|Q5TAX3 - symbol:ZCCHC11 "Terminal uridylyltrans... 212 3.7e-14 2
FB|FBgn0260780 - symbol:wisp "wispy" species:7227 "Drosop... 218 4.7e-14 1
WB|WBGene00001596 - symbol:gld-2 species:6239 "Caenorhabd... 186 6.5e-14 2
UNIPROTKB|O17087 - symbol:gld-2 "Poly(A) RNA polymerase g... 186 6.5e-14 2
WB|WBGene00009284 - symbol:F31C3.2 species:6239 "Caenorha... 212 1.0e-13 1
UNIPROTKB|I3L9X5 - symbol:ZCCHC11 "Uncharacterized protei... 209 1.8e-13 2
UNIPROTKB|F1S6H9 - symbol:ZCCHC11 "Uncharacterized protei... 209 2.7e-13 2
UNIPROTKB|Q641A1 - symbol:papd4-a "Poly(A) RNA polymerase... 189 4.2e-13 2
UNIPROTKB|E1C6A7 - symbol:ZCCHC11 "Uncharacterized protei... 215 5.7e-13 2
UNIPROTKB|Q2KEW4 - symbol:MGCH7_ch7g922 "Putative unchara... 221 5.7e-13 2
POMBASE|SPBC1685.06 - symbol:cid11 "poly(A) polymerase Ci... 198 7.0e-13 2
MGI|MGI:2445126 - symbol:Zcchc11 "zinc finger, CCHC domai... 212 1.1e-12 2
RGD|1586015 - symbol:Zcchc6 "zinc finger, CCHC domain con... 209 1.4e-12 2
UNIPROTKB|F1MCY7 - symbol:ZCCHC11 "Uncharacterized protei... 209 2.3e-12 2
POMBASE|SPAC19D5.03 - symbol:cid1 "poly(A) polymerase Cid... 193 3.2e-12 1
UNIPROTKB|F1NYJ2 - symbol:LOC100857368 "Uncharacterized p... 195 5.2e-12 2
UNIPROTKB|F1NJM6 - symbol:LOC100857368 "Uncharacterized p... 195 6.8e-12 2
UNIPROTKB|Q5VYS8 - symbol:ZCCHC6 "Terminal uridylyltransf... 203 1.0e-11 2
UNIPROTKB|E1BAR2 - symbol:ZCCHC6 "Uncharacterized protein... 201 1.7e-11 2
TAIR|locus:2043669 - symbol:AT2G45620 species:3702 "Arabi... 197 2.0e-11 2
POMBASE|SPAC17H9.01 - symbol:cid16 "poly(A) polymerase Ci... 201 2.6e-11 2
UNIPROTKB|K7GM92 - symbol:ZCCHC6 "Uncharacterized protein... 199 2.8e-11 2
UNIPROTKB|F1S4J1 - symbol:ZCCHC6 "Uncharacterized protein... 198 3.6e-11 2
ZFIN|ZDB-GENE-050522-536 - symbol:papd4 "PAP associated d... 178 4.1e-11 2
UNIPROTKB|E2RM29 - symbol:ZCCHC6 "Uncharacterized protein... 199 1.0e-10 3
UNIPROTKB|J9P044 - symbol:ZCCHC6 "Uncharacterized protein... 199 1.1e-10 3
MGI|MGI:2387179 - symbol:Zcchc6 "zinc finger, CCHC domain... 195 1.9e-10 2
POMBASE|SPAC821.04c - symbol:cid13 "poly(A) polymerase Ci... 177 8.3e-10 2
DICTYBASE|DDB_G0281431 - symbol:DDB_G0281431 "Terminal ur... 183 2.3e-09 3
DICTYBASE|DDB_G0268914 - symbol:DDB_G0268914 species:4468... 179 3.1e-09 1
TAIR|locus:2102709 - symbol:AT3G45750 "AT3G45750" species... 164 1.4e-08 1
WB|WBGene00019628 - symbol:pup-2 species:6239 "Caenorhabd... 155 8.2e-08 1
WB|WBGene00019629 - symbol:cid-1 species:6239 "Caenorhabd... 170 1.8e-07 2
FB|FBgn0035889 - symbol:mkg-p "monkey king protein" speci... 150 4.4e-07 1
UNIPROTKB|Q5T852 - symbol:MTPAP "Poly(A) RNA polymerase, ... 135 1.4e-06 1
TAIR|locus:2102714 - symbol:AT3G45760 species:3702 "Arabi... 143 1.5e-06 1
UNIPROTKB|E1C833 - symbol:PAPD4 "Uncharacterized protein"... 125 3.6e-06 2
DICTYBASE|DDB_G0268660 - symbol:DDB_G0268660 "DNA2/NAM7 h... 141 1.9e-05 1
DICTYBASE|DDB_G0268662 - symbol:DDB_G0268662 "DNA2/NAM7 h... 138 4.4e-05 1
UNIPROTKB|E9PKX1 - symbol:ZCCHC11 "Terminal uridylyltrans... 119 9.6e-05 2
WB|WBGene00003499 - symbol:mut-2 species:6239 "Caenorhabd... 126 9.9e-05 1
>UNIPROTKB|E2RCU9 [details] [associations]
symbol:MTPAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071044 "histone mRNA catabolic process"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0030145 "manganese ion binding" evidence=IEA]
[GO:0006378 "mRNA polyadenylation" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0002134 "UTP binding" evidence=IEA] [GO:0000287
"magnesium ion binding" evidence=IEA] Pfam:PF03828 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
GO:GO:0000287 GO:GO:0006378 GO:GO:0030145 GO:GO:0071044
GO:GO:0004652 InterPro:IPR002058 GeneTree:ENSGT00550000074490
GO:GO:0002134 CTD:55149 OMA:VRCWARA EMBL:AAEX03001227
RefSeq:XP_535150.2 Ensembl:ENSCAFT00000006387 GeneID:477963
KEGG:cfa:477963 Uniprot:E2RCU9
Length = 584
Score = 651 (234.2 bits), Expect = 7.6e-64, P = 7.6e-64
Identities = 179/560 (31%), Positives = 280/560 (50%)
Query: 16 DPSGNVLSKYFVPSIEYRRLEAQRSIL-----------FGTVQSMH-----HYTLPGQTH 59
D G K F + RR +AQR++L F S H H+
Sbjct: 52 DSEGRTPKKKFSELQKERREQAQRTVLIHCPNKISEKKFLKYLSQHGPINNHFFYESFGL 111
Query: 60 FVIVEM--KDSQVTRRILNKCGHLDKSQVIPVRSPFLWFRANKNKTKLSDESDYAKINCD 117
+ +VE K+S + + + + +D IP +S F F K K S S+ + I C
Sbjct: 112 YAVVEFCQKESVTSLQNITRTPSMDTEAAIPFKSRF--FNL-KMKNPSSQTSEQSCIQCS 168
Query: 118 THNVFPPTEDHVRECLASCNTITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPL 177
H+ PP+ + E L +I Q+ TL ++ + + +LR+L +E + F
Sbjct: 169 NHS--PPSSKKLSELLCYAESIDDQLNTLLKEFQLTEEDIKLRYLTCSLIEDIAAAYFLD 226
Query: 178 CAIFPFGSSVNNFGKXXXXXXXXXXXXXXXXXXNDQCR---LM-FHCKSSLGSERSQTLR 233
C + PFGSSVN+FGK ++ LM F KS + SER T +
Sbjct: 227 CTVRPFGSSVNSFGKLGCDLDMFLDLDEIGKLNTNKTSGNFLMEFQVKS-VPSERVATQK 285
Query: 234 HLETVGDLLQLFLPGCSQLFLPGCSQVKRILGARVPIIKYNHDMSALECDLSMTNLTALY 293
L +G+ C F PGC V++IL AR P+++++H S +CDL+ N AL
Sbjct: 286 VLSVIGE--------CLDHFGPGCVGVQKILNARCPLVRFSHQASGFQCDLTTNNRIALK 337
Query: 294 MAELLYLFGEIDWRVRPLVFTIKKWAKDINLTNPTPGRWITNFSLTLLVLFYLQ--SVKV 351
+ELLY++G +D RVR +VF+I+ WA+ +LT+ PG WITNFSLT++V+F+LQ S +
Sbjct: 338 SSELLYIYGALDSRVRAMVFSIRCWARAHSLTSSIPGSWITNFSLTMMVIFFLQRRSPPI 397
Query: 352 LPPLKLLIDEASLKDRRISEDGVNCTFVRDITKLQFHPSIPEQSTDSLTTLLFGFFEFYS 411
LP L L A +D+ I E G NCTF+RD+ +++ P +T++L +LL FFE++
Sbjct: 398 LPTLDYLKTLADAEDKCIIE-GHNCTFIRDLNRIK-----PSGNTETLESLLKEFFEYFG 451
Query: 412 QYDFNNQGISLYLGSPIPKPEHGALYINNPLERGLNVSKNVSFEELERLKVEVRNASWTL 471
+ FN I++ G KPE L+I NP E LN+SKNVS +L++ R ++W L
Sbjct: 452 NFAFNKNSINIRQGREQNKPESSPLHIQNPFETSLNISKNVSQSQLQKFVDLARESAWIL 511
Query: 472 ESTANSNNKPSHTPSESWGLLELFKKQNLSEKAKSVFFSEKSRPKERMVSVEDLFSTETS 531
++PS + ++ WGL L L SV ++K R K +++L E+
Sbjct: 512 SQ--EDKDRPSPSSNQPWGLAALL----LPSVVNSVSLAKKKRKKPASERIKNLL--ESI 563
Query: 532 EDSQVPVEPDFKKRKPISAQ 551
+ S + + ++ +S Q
Sbjct: 564 KSSSPENDTNTNGKRTVSTQ 583
>UNIPROTKB|F1MSM5 [details] [associations]
symbol:MTPAP "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071044 "histone mRNA catabolic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0030145 "manganese ion binding" evidence=IEA] [GO:0006378 "mRNA
polyadenylation" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
[GO:0002134 "UTP binding" evidence=IEA] [GO:0000287 "magnesium ion
binding" evidence=IEA] Pfam:PF03828 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005794 GO:GO:0000287
GO:GO:0006378 GO:GO:0030145 GO:GO:0071044 GO:GO:0004652
InterPro:IPR002058 GeneTree:ENSGT00550000074490 GO:GO:0002134
CTD:55149 OMA:VRCWARA EMBL:DAAA02035653 EMBL:DAAA02035652
IPI:IPI00717138 RefSeq:XP_002692192.2 RefSeq:XP_588743.5
UniGene:Bt.64250 PRIDE:F1MSM5 Ensembl:ENSBTAT00000005760
GeneID:511412 KEGG:bta:511412 Uniprot:F1MSM5
Length = 583
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 168/499 (33%), Positives = 259/499 (51%)
Query: 44 GTVQSMHHYTLPGQTHFVIVEMKDSQVTRRILNKCGHLDKSQVIPVRSPFLWFRANKNKT 103
G + S Y G V K+S + + + + L IP +S +L K +
Sbjct: 98 GPINSHFFYESFGLYAAVEFCQKESVTSLQNITRTPSLGPEAAIPFKSRYLNL---KLRN 154
Query: 104 KLSDESDYAKINCDTHNVFPPTEDHVRECLASCNTITQQMTTLHNITKMNDINTRLRFLV 163
L+ S+ + I C N P+ + + L ++ Q+ TL ++ + NTRLR+L
Sbjct: 155 SLNQTSELSSIQCS--NQSSPSSKKLYQLLCCAESVDDQLNTLLREFQLTEENTRLRYLT 212
Query: 164 AYQVELALSGLFPLCAIFPFGSSVNNFGKXXXXXXXXXXXXXXXXXXNDQCR---LM-FH 219
+E + FP CA+ PFGSSVN+FGK + LM F
Sbjct: 213 CSLIEDVAAAYFPDCAVRPFGSSVNSFGKLGCDLDMFLDLDEIGKFTAQKTSGNFLMEFQ 272
Query: 220 CKSSLGSERSQTLRHLETVGDLLQLFLPGCSQLFLPGCSQVKRILGARVPIIKYNHDMSA 279
K+ + SER T + L +G+ C F PGC V+RIL AR P+++++H S
Sbjct: 273 VKN-VPSERVATQKILSVIGE--------CLDQFGPGCVGVQRILNARCPLVRFSHQASG 323
Query: 280 LECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDINLTNPTPGRWITNFSLT 339
+CDL+ N AL +ELLY++G +D RVR LVF+++ WA+ +LT+ PG WITNFSLT
Sbjct: 324 FQCDLTTNNRIALKSSELLYMYGALDSRVRALVFSVRCWARAHSLTSSIPGAWITNFSLT 383
Query: 340 LLVLFYLQ--SVKVLPPLKLLIDEASLKDRRISEDGVNCTFVRDITKLQFHPSIPEQSTD 397
++V+F+LQ S +LP L L A +D+ I E G NCTFV D+ +++ P ++T+
Sbjct: 384 MMVIFFLQRRSPPILPTLDYLKTLADAEDKCIIE-GHNCTFVGDLNRIK-----PSRNTE 437
Query: 398 SLTTLLFGFFEFYSQYDFNNQGISLYLGSPIPKPEHGALYINNPLERGLNVSKNVSFEEL 457
+L LL FFE++ + FN I++ G KPE L+I NP E LNVSKNVS +L
Sbjct: 438 TLELLLKEFFEYFGNFAFNKNSINIRQGREQNKPESSPLHIQNPFETSLNVSKNVSQSQL 497
Query: 458 ERLKVEVRNASWTLESTANSNNKPSHTPSESWGLLELFKKQNLSEKAKSVFFSEKSR-P- 515
++ R ++W L ++PS + ++ WGL L L A ++ S+K + P
Sbjct: 498 QKFVDLARESAWILHQ--EGKDRPSPSSNQPWGLAALL----LPSVANNMSLSKKKKKPA 551
Query: 516 KERMVSVEDLFSTETSEDS 534
ER+ ++ D + +E+S
Sbjct: 552 SERIKNLLDSIKSSGAENS 570
>MGI|MGI:1914690 [details] [associations]
symbol:Mtpap "mitochondrial poly(A) polymerase"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000287 "magnesium ion binding" evidence=ISO]
[GO:0002134 "UTP binding" evidence=ISO] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006378 "mRNA polyadenylation" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0030145 "manganese ion
binding" evidence=ISO] [GO:0042802 "identical protein binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0071044 "histone mRNA catabolic process" evidence=ISO]
MGI:MGI:1914690 Pfam:PF03828 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005794 GO:GO:0000287
GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 GO:GO:0030145
GO:GO:0071044 eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058
GeneTree:ENSGT00550000074490 GO:GO:0002134 CTD:55149
HOGENOM:HOG000115438 HOVERGEN:HBG082104 OMA:VRCWARA
OrthoDB:EOG45TCN5 EMBL:AK011546 EMBL:AK076565 EMBL:AK135537
EMBL:BC057643 IPI:IPI00459344 RefSeq:NP_080433.1 UniGene:Mm.49826
ProteinModelPortal:Q9D0D3 SMR:Q9D0D3 PhosphoSite:Q9D0D3
PaxDb:Q9D0D3 PRIDE:Q9D0D3 Ensembl:ENSMUST00000025077 GeneID:67440
KEGG:mmu:67440 UCSC:uc008dyi.1 InParanoid:Q9D0D3 NextBio:324570
Bgee:Q9D0D3 CleanEx:MM_PAPD1 Genevestigator:Q9D0D3
GermOnline:ENSMUSG00000024234 Uniprot:Q9D0D3
Length = 585
Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
Identities = 169/488 (34%), Positives = 251/488 (51%)
Query: 60 FVIVEMKDSQVTRRILNKCGHLDKSQ--VIPVRSPFLWFRANKNKTKLSDESDYAKINCD 117
F +VE + + N +S IP +S FL R +++S + + +
Sbjct: 113 FAVVEFCQKDSIKSLQNGTHTPTQSTEAAIPFKSRFLNLRLKNPSSQVSGQP-FVQ---- 167
Query: 118 THNVFPPTEDHVRECLASCNTITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPL 177
T N PP+ + E L+ +I +Q+ TL ++ + N RLR L +E + FP
Sbjct: 168 TTNQSPPSSKKLFELLSYAESIEEQLNTLLKAFQLTEENIRLRHLTCSLIEDIAAAYFPS 227
Query: 178 CAIFPFGSSVNNFGKXX---XXXXXXXXXXXXXXXXNDQCRLM-FHCKSSLGSERSQTLR 233
C I PFGSSVN FGK N M F K+ + SER T +
Sbjct: 228 CVIRPFGSSVNTFGKLGCDLDMFLDLDETGKLDVHKNTGNFFMEFQVKN-VPSERIATQK 286
Query: 234 HLETVGDLLQLFLPGCSQLFLPGCSQVKRILGARVPIIKYNHDMSALECDLSMTNLTALY 293
L +G+ C F PGC V++IL AR P+++++H S +CDL+ N AL
Sbjct: 287 ILSVIGE--------CLDNFGPGCVGVQKILNARCPLVRFSHQGSGFQCDLTANNSIALK 338
Query: 294 MAELLYLFGEIDWRVRPLVFTIKKWAKDINLTNPTPGRWITNFSLTLLVLFYLQ--SVKV 351
+ELLY++G +D RVR LVF+++ WA+ +LT+ PG WITNFSLT++V+F+LQ S +
Sbjct: 339 SSELLYIYGSLDSRVRALVFSVRCWARAHSLTSSIPGAWITNFSLTVMVIFFLQRRSPPI 398
Query: 352 LPPLKLLIDEASLKDRRISEDGVNCTFVRDITKLQFHPSIPEQSTDSLTTLLFGFFEFYS 411
LP L L A +DR I E G NCTFV+D+ K+Q P +T++L L+ FFE++
Sbjct: 399 LPTLDSLKSIADAEDRCILE-GNNCTFVQDVNKIQ-----PSGNTETLELLIKEFFEYFG 452
Query: 412 QYDFNNQGISLYLGSPIPKPEHGALYINNPLERGLNVSKNVSFEELERLKVEVRNASWTL 471
+ FN I++ G KP+ LYI NP E LN+SKNVS +L++ R+++W L
Sbjct: 453 NFAFNKNSINIRQGREQNKPDSSPLYIQNPFETSLNISKNVSQSQLQKFVELARDSAWIL 512
Query: 472 ESTANSNNKPSHTPSESWGLLELFKKQ-----NLSEKAKSVFFSEKSRPKERMVSVEDLF 526
E N+P + + WGL L +LS K K SEK K + S++
Sbjct: 513 EQ--EDKNQPFSSSRQPWGLAALLLPPGSGHTSLSRKKKKKPMSEKV--KGLLASIKSN- 567
Query: 527 STETSEDS 534
S ++S D+
Sbjct: 568 SPDSSTDT 575
>RGD|1310900 [details] [associations]
symbol:Mtpap "mitochondrial poly(A) polymerase" species:10116
"Rattus norvegicus" [GO:0000287 "magnesium ion binding"
evidence=IEA;ISO] [GO:0002134 "UTP binding" evidence=IEA;ISO]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005794 "Golgi apparatus" evidence=IEA;ISO] [GO:0005886 "plasma
membrane" evidence=IEA;ISO] [GO:0006378 "mRNA polyadenylation"
evidence=IEA;ISO] [GO:0030145 "manganese ion binding"
evidence=IEA;ISO] [GO:0042802 "identical protein binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=IEA;ISO] [GO:0071044 "histone mRNA catabolic process"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
Pfam:PF03828 RGD:1310900 GO:GO:0005739 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 GO:GO:0005794 GO:GO:0000287 GO:GO:0006378
GO:GO:0030145 GO:GO:0071044 GO:GO:0004652 InterPro:IPR002058
GeneTree:ENSGT00550000074490 GO:GO:0002134 OMA:VRCWARA
OrthoDB:EOG45TCN5 IPI:IPI00366610 Ensembl:ENSRNOT00000022462
UCSC:RGD:1310900 Uniprot:D3ZPN5
Length = 584
Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
Identities = 162/452 (35%), Positives = 238/452 (52%)
Query: 87 IPVRSPFLWFRANKNKTKLSDESDYAKINCDTHNVFPPTEDHVRECLASCNTITQQMTTL 146
IP +S FL + ++S +S + D+ + PP+ + E L+ +I Q+T L
Sbjct: 142 IPFKSRFLNLKLKNPSNQVSGQSF---VQADSQS--PPSSKKLFELLSYAESIDAQLTAL 196
Query: 147 HNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFPFGSSVNNFGKXX---XXXXXXXXX 203
++ + N RLR L +E + FP C ++PFGSSVN FGK
Sbjct: 197 LKAFQLTEENVRLRHLTCSLIEDIAAAYFPSCVVWPFGSSVNTFGKLGCDLDMFLDLDET 256
Query: 204 XXXXXXXNDQCRLM-FHCKSSLGSERSQTLRHLETVGDLLQLFLPGCSQLFLPGCSQVKR 262
N LM F K+ + SER T + L +G+ C F PGC V++
Sbjct: 257 GNLSDHKNTGNFLMEFQVKN-VPSERVATQKILSVIGE--------CLDNFGPGCVGVQK 307
Query: 263 ILGARVPIIKYNHDMSALECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDI 322
IL AR P+++++H S +CDL+ N AL +ELLY++G +D RVR LVF ++ WA+
Sbjct: 308 ILNARCPLVRFSHQGSGFQCDLTANNSIALKSSELLYIYGSLDSRVRALVFGVRCWARAH 367
Query: 323 NLTNPTPGRWITNFSLTLLVLFYLQ--SVKVLPPLKLLIDEASLKDRRISEDGVNCTFVR 380
+LT+ PG WITNFSLT++V+F+LQ S +LP L L A +DR I E G NCTF++
Sbjct: 368 SLTSSIPGAWITNFSLTMMVIFFLQRRSPPILPTLDSLKSMADAEDRCILE-GNNCTFIQ 426
Query: 381 DITKLQFHPSIPEQSTDSLTTLLFGFFEFYSQYDFNNQGISLYLGSPIPKPEHGALYINN 440
DI K++ P +T++L LL FFE++ + FN I++ G KP+ LYI N
Sbjct: 427 DINKIK-----PSGNTETLELLLKEFFEYFGNFAFNKNSINIRQGREQNKPDSSPLYIQN 481
Query: 441 PLERGLNVSKNVSFEELERLKVEVRNASWTLESTANSNNKPSHTPSESWGLLELF----- 495
P E LN+SKNVS +L++ R+++W LE ++PS + S WGL L
Sbjct: 482 PFETSLNISKNVSQNQLQKFVELARDSAWILEQ--EKKDQPSSS-SHPWGLAALLLPPGA 538
Query: 496 ---------KKQNLSEKAKSVFFSEKSRPKER 518
KK+ +SEK K + S KS +R
Sbjct: 539 GQTSLSRKKKKKPMSEKVKGLLASIKSNSPDR 570
>UNIPROTKB|Q9NVV4 [details] [associations]
symbol:MTPAP "Poly(A) RNA polymerase, mitochondrial"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008219 "cell death" evidence=IEA] [GO:0071044 "histone mRNA
catabolic process" evidence=IMP] [GO:0030145 "manganese ion
binding" evidence=IDA] [GO:0000287 "magnesium ion binding"
evidence=IDA] [GO:0002134 "UTP binding" evidence=IDA] [GO:0005524
"ATP binding" evidence=IDA] [GO:0006378 "mRNA polyadenylation"
evidence=IDA] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=IDA] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Pfam:PF03828
GO:GO:0005739 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0000287 GO:GO:0008219 GO:GO:0006378
GO:GO:0006351 GO:GO:0003723 EMBL:CH471072 GO:GO:0030145
GO:GO:0071044 eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058
GO:GO:0002134 EMBL:AL161651 EMBL:AB194709 EMBL:AY364242
EMBL:AK001348 EMBL:AK022188 EMBL:AL122121 EMBL:AL353796
EMBL:BC061703 IPI:IPI00153051 IPI:IPI00470416 RefSeq:NP_060579.3
UniGene:Hs.173946 PDB:3PQ1 PDBsum:3PQ1 ProteinModelPortal:Q9NVV4
SMR:Q9NVV4 IntAct:Q9NVV4 STRING:Q9NVV4 PhosphoSite:Q9NVV4
DMDM:74753002 PaxDb:Q9NVV4 PRIDE:Q9NVV4 Ensembl:ENST00000263063
Ensembl:ENST00000358107 GeneID:55149 KEGG:hsa:55149 UCSC:uc001iva.4
UCSC:uc001ivb.4 CTD:55149 GeneCards:GC10M030598 HGNC:HGNC:25532
HPA:HPA038620 MIM:613669 MIM:613672 neXtProt:NX_Q9NVV4
PharmGKB:PA164723192 HOGENOM:HOG000115438 HOVERGEN:HBG082104
OMA:VRCWARA OrthoDB:EOG45TCN5 PhylomeDB:Q9NVV4
EvolutionaryTrace:Q9NVV4 GenomeRNAi:55149 NextBio:58876
ArrayExpress:Q9NVV4 Bgee:Q9NVV4 Genevestigator:Q9NVV4
GermOnline:ENSG00000107951 Uniprot:Q9NVV4
Length = 582
Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
Identities = 159/472 (33%), Positives = 252/472 (53%)
Query: 87 IPVRSPFLWFRANKNKTKLSDESDYAKINCDTHNVFPPTEDHVRECLASCNTITQQMTTL 146
IP RS F + KN+T S+ +++ + N P + + E L +I Q+ TL
Sbjct: 142 IPFRSRFFNLKL-KNQT-----SERSRVR--SSNQLPRSNKQLFELLCYAESIDDQLNTL 193
Query: 147 HNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFPFGSSVNNFGKXXXXXXXXXXXXXX 206
++ + NT+LR+L +E + FP C + PFGSSVN FGK
Sbjct: 194 LKEFQLTEENTKLRYLTCSLIEDMAAAYFPDCIVRPFGSSVNTFGKLGCDLDMFLDLDET 253
Query: 207 XXXXNDQCR---LM-FHCKSSLGSERSQTLRHLETVGDLLQLFLPGCSQLFLPGCSQVKR 262
+ LM F K+ + SER T + L +G+ C F PGC V++
Sbjct: 254 RNLSAHKISGNFLMEFQVKN-VPSERIATQKILSVLGE--------CLDHFGPGCVGVQK 304
Query: 263 ILGARVPIIKYNHDMSALECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDI 322
IL AR P+++++H S +CDL+ N AL +ELLY++G +D RVR LVF+++ WA+
Sbjct: 305 ILNARCPLVRFSHQASGFQCDLTTNNRIALTSSELLYIYGALDSRVRALVFSVRCWARAH 364
Query: 323 NLTNPTPGRWITNFSLTLLVLFYLQ--SVKVLPPLKLLIDEASLKDRRISEDGVNCTFVR 380
+LT+ PG WITNFSLT++V+F+LQ S +LP L L A +D+ + E G NCTFVR
Sbjct: 365 SLTSSIPGAWITNFSLTMMVIFFLQRRSPPILPTLDSLKTLADAEDKCVIE-GNNCTFVR 423
Query: 381 DITKLQFHPSIPEQSTDSLTTLLFGFFEFYSQYDFNNQGISLYLGSPIPKPEHGALYINN 440
D+++++ P Q+T++L LL FFE++ + F+ I++ G KP+ LYI N
Sbjct: 424 DLSRIK-----PSQNTETLELLLKEFFEYFGNFAFDKNSINIRQGREQNKPDSSPLYIQN 478
Query: 441 PLERGLNVSKNVSFEELERLKVEVRNASWTLESTANSNNKPSHTPSESWGLLELFKKQNL 500
P E LN+SKNVS +L++ R ++W L+ ++PS + + WGL+ L
Sbjct: 479 PFETSLNISKNVSQSQLQKFVDLARESAWILQQ--EDTDRPSISSNRPWGLVSLLLPSAP 536
Query: 501 SEKAKSVFFSEKSRPKERMVSVEDLFSTETSEDSQVPVEPDFKKRKPISAQT 552
+ K+ F++K K + +V++L E+ + ++ ++ IS QT
Sbjct: 537 NRKS----FTKKKSNKFAIETVKNLL--ESLKGNRTENFTKTSGKRTISTQT 582
>UNIPROTKB|F1NBW0 [details] [associations]
symbol:MTPAP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000287 "magnesium ion binding" evidence=IEA]
[GO:0002134 "UTP binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006378 "mRNA polyadenylation" evidence=IEA]
[GO:0030145 "manganese ion binding" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0071044
"histone mRNA catabolic process" evidence=IEA] Pfam:PF03828
GO:GO:0005739 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0000287 GO:GO:0006378 GO:GO:0030145
GO:GO:0071044 GO:GO:0004652 InterPro:IPR002058
GeneTree:ENSGT00550000074490 GO:GO:0002134 OMA:VRCWARA
EMBL:AADN02000527 EMBL:AADN02000528 IPI:IPI00597569
Ensembl:ENSGALT00000011888 Uniprot:F1NBW0
Length = 518
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 145/422 (34%), Positives = 221/422 (52%)
Query: 86 VIPVRSPFLWFRANKNKTKLSDESDYAKINCDTHNVFPPTEDHVRECLASCNTITQQMTT 145
V+P +S F KN + E KI+ +H P E + C A ++I+ QM
Sbjct: 82 VVPYKSRLFTFTL-KNPGSQAAEERPVKISPQSH--IPVNELIPKLCHA--DSISSQMYI 136
Query: 146 LHNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFPFGSSVNNFGKXXXXXXXXXXXXX 205
L N ++ + N +LR+L V FP + PFGSSVN FGK
Sbjct: 137 LLNEYQLTEENIKLRYLACSLVRDFARAYFPDSTVKPFGSSVNTFGKLGCDVDMFLDFHD 196
Query: 206 XXXXXNDQCRLMFHCK---SSLGSERSQTLRHLETVGDLLQLFLPGCSQLFLPGCSQVKR 262
+ F + L SER T + L +GD C F PG S V++
Sbjct: 197 IQKHATKMKKGPFEMEYQMKRLPSERLATQKILSIIGD--------CLDNFGPGYSSVQK 248
Query: 263 ILGARVPIIKYNHDMSALECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDI 322
IL AR P++K++H + +CDLS++N A+ +ELLY++G +D RVR LVF+++ WA+
Sbjct: 249 ILNARCPLVKFSHQPTGFQCDLSVSNSIAIRCSELLYIYGCLDPRVRALVFSLRCWARVH 308
Query: 323 NLTNPTPGRWITNFSLTLLVLFYLQ--SVKVLPPLKLLIDEASLKDRRISEDGVNCTFVR 380
LTN PG WITNFSLT++++F+LQ S ++P L L + A KD+ + G +C+FV
Sbjct: 309 GLTNSVPGTWITNFSLTMMIMFFLQKRSPPIIPTLDQLKELADEKDKHVI-GGYDCSFVS 367
Query: 381 DITKLQFHPSIPEQSTDSLTTLLFGFFEFYSQYDFNNQGISLYLGSPIPKPEHGALYINN 440
D++K++ P ++T++L LL FF+++ +DF ++L G + KPE LYI N
Sbjct: 368 DLSKIK-----PTKNTETLDELLCDFFQYFGNFDFRKNSLNLRKGKEVNKPESSPLYIWN 422
Query: 441 PLERGLNVSKNVSFEELERLKVEVRNASWTLESTANSNNKPSHTPSESWGLLEL---FKK 497
P E+ LN+SKNV+ +LE+ R ++W L+ + + P WGL + F K
Sbjct: 423 PFEQDLNISKNVNQPQLEKFVAMARESAWILQKEDKTQQMINKEP---WGLAAVLIPFGK 479
Query: 498 QN 499
N
Sbjct: 480 SN 481
>UNIPROTKB|F1RPX0 [details] [associations]
symbol:TUT1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 InterPro:IPR015880
PROSITE:PS50102 SMART:SM00355 SMART:SM00360 Pfam:PF03828
GO:GO:0005730 GO:GO:0000166 GO:GO:0016607 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0006378 GO:GO:0003730 GO:GO:0005847
GO:GO:0006379 GO:GO:0004652 InterPro:IPR002058 GO:GO:0050265
GeneTree:ENSGT00550000074490 GO:GO:0016180 OMA:EQQGCAG
EMBL:FP102338 EMBL:FP312617 Ensembl:ENSSSCT00000014279
Uniprot:F1RPX0
Length = 872
Score = 293 (108.2 bits), Expect = 8.9e-29, Sum P(2) = 8.9e-29
Identities = 89/292 (30%), Positives = 150/292 (51%)
Query: 223 SLGSERSQTLRHLETVGDLLQLFLPGCSQLFLPGCSQVKRILGARVPIIKYNHDMSALEC 282
+L E+++ LE VG +L+ GC +PG +V+ + AR P++K+ H S L
Sbjct: 329 ALKGEKAEGGAMLELVGSILR----GC----VPGVYRVQTVPSARRPVVKFCHRPSGLHG 380
Query: 283 DLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDINLTNPTPGRWITNFSLTLLV 342
D+S++N AL+ + L L E+D RVRPLV+T++ WA+ L+ P ++N++LTLLV
Sbjct: 381 DVSLSNRLALHNSRFLSLCSELDGRVRPLVYTVRCWAQGRGLSGSGP--LLSNYALTLLV 438
Query: 343 LFYLQS--VKVLPPLKLLIDEASLKDRRISEDGVNCTFVRDITKLQFHPSIPEQSTDSLT 400
+++LQ+ VLP + L +A + ++ DG +C+F RD ++L+ P + + L+
Sbjct: 439 IYFLQTRDPPVLPTVSQLTQKAG-EGEQVEVDGWDCSFPRDASRLE-----PSTNKEPLS 492
Query: 401 TLLFGFFEFYSQYDFNNQGISLYLGSPIPK----PEH-------GALYINNPLERGLNVS 449
+LL FF S +D +SL G +P P + G + + +P + NV+
Sbjct: 493 SLLAQFFSCISCWDLRGSLLSLREGQALPVAGGLPSNLWEGLRLGPMNLQDPFDLSHNVA 552
Query: 450 KNVSFEELERLKVEVRNASWTLESTANSNNKPSHTPSESWGLLELFKKQNLS 501
NV+ RL+ R A+ S + WGLL L + + S
Sbjct: 553 ANVTSRVAGRLQNCCRAAANYCRSLQYQRRS---SRGRDWGLLPLVQPSSPS 601
Score = 105 (42.0 bits), Expect = 8.9e-29, Sum P(2) = 8.9e-29
Identities = 31/146 (21%), Positives = 64/146 (43%)
Query: 45 TVQSMHHYTLPGQTHFVIVEMKDSQVTRRILNKCGHLDKSQVIPVRSPFLWFRANKNKTK 104
+ Q ++ G V+++ KD V + + G +D + + + P R + + +
Sbjct: 69 STQLSEYFQAFGPVASVVMD-KDKGVFAIV--EMGDIDAREAV-LSQPQHSLRGQRLRVR 124
Query: 105 LSDESDYAKINCDTHNVFPPTEDHVRECLASCNTITQQMTTLHNITKMNDINTRLRFLVA 164
++ ++ + P + LA + QM L + ++++ +LR LV
Sbjct: 125 PREQKEFQSPASRSPKGAAPDSHQLARALAEAPDVGAQMVKLVGLRELSEAERQLRSLVV 184
Query: 165 YQVELALSGLFPLCAIFPFGSSVNNF 190
++ + FP C + PFGSSVN+F
Sbjct: 185 ALMQEVFTEFFPGCVVHPFGSSVNSF 210
>UNIPROTKB|Q9H6E5 [details] [associations]
symbol:TUT1 "Speckle targeted PIP5K1A-regulated poly(A)
polymerase" species:9606 "Homo sapiens" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003730 "mRNA
3'-UTR binding" evidence=IDA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IDA]
[GO:0006378 "mRNA polyadenylation" evidence=IMP;IDA] [GO:0006379
"mRNA cleavage" evidence=IDA] [GO:0050265 "RNA uridylyltransferase
activity" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0016180 "snRNA processing" evidence=IMP] [GO:0019899 "enzyme
binding" evidence=IPI] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IDA] [GO:0071044 "histone
mRNA catabolic process" evidence=IMP] InterPro:IPR000504
InterPro:IPR012677 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50102 PROSITE:PS50157 SMART:SM00355 SMART:SM00360
Pfam:PF03828 GO:GO:0005524 GO:GO:0005730 GO:GO:0046872
GO:GO:0016607 GO:GO:0008270 EMBL:CH471076 Gene3D:3.30.70.330
GO:GO:0006378 GO:GO:0003730 GO:GO:0006379 eggNOG:COG5260
GO:GO:0004652 InterPro:IPR002058 GO:GO:0050265 GO:GO:0016180
HOGENOM:HOG000115998 CTD:64852 HOVERGEN:HBG079670 OrthoDB:EOG480HWB
EMBL:AK025920 EMBL:AK026000 EMBL:AK292610 EMBL:AP002990
EMBL:BC005013 EMBL:BC110910 EMBL:BC128263 IPI:IPI01012096
RefSeq:NP_073741.2 UniGene:Hs.728983 PDB:2E5G PDBsum:2E5G
ProteinModelPortal:Q9H6E5 SMR:Q9H6E5 IntAct:Q9H6E5 STRING:Q9H6E5
DMDM:126302611 PaxDb:Q9H6E5 PRIDE:Q9H6E5 Ensembl:ENST00000476907
GeneID:64852 KEGG:hsa:64852 GeneCards:GC11M062342 HGNC:HGNC:26184
MIM:610641 neXtProt:NX_Q9H6E5 PharmGKB:PA162407405
InParanoid:Q9H6E5 EvolutionaryTrace:Q9H6E5 GenomeRNAi:64852
NextBio:66977 ArrayExpress:Q9H6E5 Bgee:Q9H6E5 CleanEx:HS_TUT1
Genevestigator:Q9H6E5 GermOnline:ENSG00000149016 Uniprot:Q9H6E5
Length = 874
Score = 298 (110.0 bits), Expect = 1.0e-28, Sum P(2) = 1.0e-28
Identities = 91/288 (31%), Positives = 150/288 (52%)
Query: 227 ERSQTLRHLETVGDLLQLFLPGCSQLFLPGCSQVKRILGARVPIIKYNHDMSALECDLSM 286
E+++ LE VG +L+ GC +PG +V+ + AR P++K+ H S L D+S+
Sbjct: 333 EKAEGAAMLELVGSILR----GC----VPGVYRVQTVPSARRPVVKFCHRPSGLHGDVSL 384
Query: 287 TNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDINLTNPTPGRWITNFSLTLLVLFYL 346
+N AL+ + L L E+D RVRPLV+T++ WA+ L+ P ++N++LTLLV+++L
Sbjct: 385 SNRLALHNSRFLSLCSELDGRVRPLVYTLRCWAQGRGLSGSGP--LLSNYALTLLVIYFL 442
Query: 347 QS--VKVLPPLKLLIDEASLKDRRISEDGVNCTFVRDITKLQFHPSIPEQSTDSLTTLLF 404
Q+ VLP + L +A + ++ DG +C+F RD ++L+ PSI + + L++LL
Sbjct: 443 QTRDPPVLPTVSQLTQKAG-EGEQVEVDGWDCSFPRDASRLE--PSI---NVEPLSSLLA 496
Query: 405 GFFEFYSQYDFNNQGISLYLGSPIPK----PEH-------GALYINNPLERGLNVSKNVS 453
FF S +D +SL G +P P + G L + +P + NV+ NV+
Sbjct: 497 QFFSCVSCWDLRGSLLSLREGQALPVAGGLPSNLWEGLRLGPLNLQDPFDLSHNVAANVT 556
Query: 454 FEELERLKVEVRNASWTLESTANSNNKPSHTPSESWGLLELFKKQNLS 501
RL+ R A+ S + WGLL L + + S
Sbjct: 557 SRVAGRLQNCCRAAANYCRSLQYQRRS---SRGRDWGLLPLLQPSSPS 601
Score = 99 (39.9 bits), Expect = 1.0e-28, Sum P(2) = 1.0e-28
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 124 PTEDHVRECLASCNTITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFPF 183
P + + LA + QM L + ++++ +LR LV ++ + FP C + PF
Sbjct: 144 PDSHQLAKALAEAADVGAQMIKLVGLRELSEAERQLRSLVVALMQEVFTEFFPGCVVHPF 203
Query: 184 GSSVNNF 190
GSS+N+F
Sbjct: 204 GSSINSF 210
>UNIPROTKB|F5H0R1 [details] [associations]
symbol:TUT1 "Speckle targeted PIP5K1A-regulated poly(A)
polymerase" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 InterPro:IPR015880 PROSITE:PS50102 SMART:SM00355
SMART:SM00360 Pfam:PF03828 GO:GO:0000166 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 InterPro:IPR002058
CTD:64852 EMBL:AP002990 RefSeq:NP_073741.2 UniGene:Hs.728983
GeneID:64852 KEGG:hsa:64852 HGNC:HGNC:26184 GenomeRNAi:64852
NextBio:66977 OMA:EQQGCAG IPI:IPI00946813 ProteinModelPortal:F5H0R1
SMR:F5H0R1 PhosphoSite:F5H0R1 PRIDE:F5H0R1 Ensembl:ENST00000308436
UCSC:uc001nto.2 ArrayExpress:F5H0R1 Bgee:F5H0R1 Uniprot:F5H0R1
Length = 912
Score = 298 (110.0 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 91/288 (31%), Positives = 150/288 (52%)
Query: 227 ERSQTLRHLETVGDLLQLFLPGCSQLFLPGCSQVKRILGARVPIIKYNHDMSALECDLSM 286
E+++ LE VG +L+ GC +PG +V+ + AR P++K+ H S L D+S+
Sbjct: 371 EKAEGAAMLELVGSILR----GC----VPGVYRVQTVPSARRPVVKFCHRPSGLHGDVSL 422
Query: 287 TNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDINLTNPTPGRWITNFSLTLLVLFYL 346
+N AL+ + L L E+D RVRPLV+T++ WA+ L+ P ++N++LTLLV+++L
Sbjct: 423 SNRLALHNSRFLSLCSELDGRVRPLVYTLRCWAQGRGLSGSGP--LLSNYALTLLVIYFL 480
Query: 347 QS--VKVLPPLKLLIDEASLKDRRISEDGVNCTFVRDITKLQFHPSIPEQSTDSLTTLLF 404
Q+ VLP + L +A + ++ DG +C+F RD ++L+ PSI + + L++LL
Sbjct: 481 QTRDPPVLPTVSQLTQKAG-EGEQVEVDGWDCSFPRDASRLE--PSI---NVEPLSSLLA 534
Query: 405 GFFEFYSQYDFNNQGISLYLGSPIPK----PEH-------GALYINNPLERGLNVSKNVS 453
FF S +D +SL G +P P + G L + +P + NV+ NV+
Sbjct: 535 QFFSCVSCWDLRGSLLSLREGQALPVAGGLPSNLWEGLRLGPLNLQDPFDLSHNVAANVT 594
Query: 454 FEELERLKVEVRNASWTLESTANSNNKPSHTPSESWGLLELFKKQNLS 501
RL+ R A+ S + WGLL L + + S
Sbjct: 595 SRVAGRLQNCCRAAANYCRSLQYQRRS---SRGRDWGLLPLLQPSSPS 639
Score = 99 (39.9 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 124 PTEDHVRECLASCNTITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFPF 183
P + + LA + QM L + ++++ +LR LV ++ + FP C + PF
Sbjct: 182 PDSHQLAKALAEAADVGAQMIKLVGLRELSEAERQLRSLVVALMQEVFTEFFPGCVVHPF 241
Query: 184 GSSVNNF 190
GSS+N+F
Sbjct: 242 GSSINSF 248
>UNIPROTKB|D2HS90 [details] [associations]
symbol:TUT1 "Speckle targeted PIP5K1A-regulated poly(A)
polymerase" species:9646 "Ailuropoda melanoleuca" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0003730 "mRNA 3'-UTR binding"
evidence=ISS] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0006378 "mRNA polyadenylation" evidence=ISS] [GO:0006379 "mRNA
cleavage" evidence=ISS] [GO:0016180 "snRNA processing"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=ISS] [GO:0050265
"RNA uridylyltransferase activity" evidence=ISS] [GO:0005847 "mRNA
cleavage and polyadenylation specificity factor complex"
evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50102 PROSITE:PS50157
SMART:SM00355 SMART:SM00360 Pfam:PF03828 GO:GO:0005524
GO:GO:0005730 GO:GO:0046872 GO:GO:0016607 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0006378 GO:GO:0003730 GO:GO:0005847
GO:GO:0006379 GO:GO:0004652 InterPro:IPR002058 GO:GO:0050265
GO:GO:0016180 EMBL:GL193267 ProteinModelPortal:D2HS90
HOGENOM:HOG000115998 Uniprot:D2HS90
Length = 869
Score = 296 (109.3 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 88/292 (30%), Positives = 150/292 (51%)
Query: 223 SLGSERSQTLRHLETVGDLLQLFLPGCSQLFLPGCSQVKRILGARVPIIKYNHDMSALEC 282
+L E+++ + LE VG +L+ GC +PG +V+ + AR P++K+ H S L
Sbjct: 328 ALSGEKTEGVAMLELVGSILR----GC----VPGVYRVQTVPSARRPVVKFCHRPSGLHG 379
Query: 283 DLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDINLTNPTPGRWITNFSLTLLV 342
D+S++N AL+ + L L E+D RVRPLV+T++ WA+ L+ P ++N++LTLLV
Sbjct: 380 DVSLSNRLALHNSRFLSLCSELDGRVRPLVYTLRCWAQGRGLSGSGP--LLSNYALTLLV 437
Query: 343 LFYLQS--VKVLPPLKLLIDEASLKDRRISEDGVNCTFVRDITKLQFHPSIPEQSTDSLT 400
+++LQ+ VLP + L +A + ++ DG +C+F RD + L+ P + + L+
Sbjct: 438 IYFLQTRDPPVLPTVSQLTQKAG-EGEQVEVDGWDCSFPRDASGLE-----PSTNKEPLS 491
Query: 401 TLLFGFFEFYSQYDFNNQGISLYLGSPIPK----PEH-------GALYINNPLERGLNVS 449
+LL FF S +D +SL G +P P + G + + +P + NV+
Sbjct: 492 SLLAQFFSCVSCWDLRGSLLSLREGQALPVAGDLPSNRWEGLRLGPMNLQDPFDLSHNVA 551
Query: 450 KNVSFEELERLKVEVRNASWTLESTANSNNKPSHTPSESWGLLELFKKQNLS 501
NV+ RL+ + A+ S + WGLL L + + S
Sbjct: 552 ANVTSRVAGRLQNSCQAAANYCRSLQYQRRS---SRGRDWGLLPLLQPSSPS 600
Score = 99 (39.9 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 124 PTEDHVRECLASCNTITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFPF 183
P + + LA + QM L + ++++ +LR LV ++ + FP C + PF
Sbjct: 144 PDSHQLTKALAEAPDVGAQMVKLVGLRELSEAERQLRNLVVALMQEVFTEFFPGCVVHPF 203
Query: 184 GSSVNNF 190
GSS+N+F
Sbjct: 204 GSSINSF 210
>UNIPROTKB|F6X6U9 [details] [associations]
symbol:MIR3654 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
InterPro:IPR015880 PROSITE:PS50102 SMART:SM00355 SMART:SM00360
Pfam:PF03828 GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0005622 InterPro:IPR002058
Ensembl:ENSCAFT00000025061 ProteinModelPortal:F6X6U9 Uniprot:F6X6U9
Length = 818
Score = 293 (108.2 bits), Expect = 3.0e-28, Sum P(2) = 3.0e-28
Identities = 90/292 (30%), Positives = 151/292 (51%)
Query: 223 SLGSERSQTLRHLETVGDLLQLFLPGCSQLFLPGCSQVKRILGARVPIIKYNHDMSALEC 282
+L E+ + LE VG +L+ GC +PG +V+ + AR P++K+ H S L
Sbjct: 330 ALKGEKPEGAAMLELVGSILR----GC----VPGVYRVQTVPSARRPVVKFCHRPSGLHG 381
Query: 283 DLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDINLTNPTPGRWITNFSLTLLV 342
D+S++N AL+ + L L E+D RVRPLV+T++ WA+ L+ P ++N++LTLLV
Sbjct: 382 DVSLSNRLALHNSRFLSLCSELDERVRPLVYTLRCWAQGRGLSGSGP--LLSNYALTLLV 439
Query: 343 LFYLQSVK--VLPPLKLLIDEASLKDRRISEDGVNCTFVRDITKLQFHPSIPEQSTDSLT 400
+++LQ+ + VLP + L +A + ++ DG +C+F RD ++L+ P + + L+
Sbjct: 440 IYFLQTREPPVLPTVSQLTQKAG-EGEQVEVDGWDCSFPRDASRLE-----PSTNKEPLS 493
Query: 401 TLLFGFFEFYSQYDFNNQGISLYLGSPIPK----PEH-------GALYINNPLERGLNVS 449
+LL FF S +D +SL G +P P + G + + +P + NV+
Sbjct: 494 SLLAQFFSCVSCWDLRGSLLSLREGQVLPVAGGLPSNRWEGLRLGPMNLQDPFDLSHNVA 553
Query: 450 KNVSFEELERLKVEVRNASWTLESTANSNNKPSHTPSESWGLLELFKKQNLS 501
NV+ RL+ R A+ S + S WGLL L + + S
Sbjct: 554 ANVTSRVAGRLQNCCRAAANYCRSL-QFQRRSSR--GRDWGLLPLLQPSSPS 602
Score = 99 (39.9 bits), Expect = 3.0e-28, Sum P(2) = 3.0e-28
Identities = 35/131 (26%), Positives = 58/131 (44%)
Query: 60 FVIVEMKDSQVTRRILNKCGHLDKSQVIPVRSPFLWFRANKNKTKLSDESDYAKINCDTH 119
F IVEM D++ +L++ H + VR P R K + +S D+H
Sbjct: 94 FAIVEMGDTETREAVLSQPQHSLGGHRLRVR-P----REQKEFQSPASKSPKGAAP-DSH 147
Query: 120 NVFPPTEDHVRECLASCNTITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCA 179
+ + LA + QM L + ++++ +LR LV ++ FP C
Sbjct: 148 QL--------AKALAEAPDVGAQMVKLVGLRELSEAERQLRSLVVALMQEVFMEFFPGCV 199
Query: 180 IFPFGSSVNNF 190
+ PFGSS+N+F
Sbjct: 200 VHPFGSSINSF 210
>UNIPROTKB|E2R634 [details] [associations]
symbol:TUT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
InterPro:IPR015880 PROSITE:PS50102 SMART:SM00355 SMART:SM00360
Pfam:PF03828 GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0005622 InterPro:IPR002058
GeneTree:ENSGT00550000074490 OMA:EQQGCAG EMBL:AAEX03011664
Ensembl:ENSCAFT00000025061 Uniprot:E2R634
Length = 873
Score = 293 (108.2 bits), Expect = 3.8e-28, Sum P(2) = 3.8e-28
Identities = 90/292 (30%), Positives = 151/292 (51%)
Query: 223 SLGSERSQTLRHLETVGDLLQLFLPGCSQLFLPGCSQVKRILGARVPIIKYNHDMSALEC 282
+L E+ + LE VG +L+ GC +PG +V+ + AR P++K+ H S L
Sbjct: 328 ALKGEKPEGAAMLELVGSILR----GC----VPGVYRVQTVPSARRPVVKFCHRPSGLHG 379
Query: 283 DLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDINLTNPTPGRWITNFSLTLLV 342
D+S++N AL+ + L L E+D RVRPLV+T++ WA+ L+ P ++N++LTLLV
Sbjct: 380 DVSLSNRLALHNSRFLSLCSELDERVRPLVYTLRCWAQGRGLSGSGP--LLSNYALTLLV 437
Query: 343 LFYLQSVK--VLPPLKLLIDEASLKDRRISEDGVNCTFVRDITKLQFHPSIPEQSTDSLT 400
+++LQ+ + VLP + L +A + ++ DG +C+F RD ++L+ P + + L+
Sbjct: 438 IYFLQTREPPVLPTVSQLTQKAG-EGEQVEVDGWDCSFPRDASRLE-----PSTNKEPLS 491
Query: 401 TLLFGFFEFYSQYDFNNQGISLYLGSPIPK----PEH-------GALYINNPLERGLNVS 449
+LL FF S +D +SL G +P P + G + + +P + NV+
Sbjct: 492 SLLAQFFSCVSCWDLRGSLLSLREGQVLPVAGGLPSNRWEGLRLGPMNLQDPFDLSHNVA 551
Query: 450 KNVSFEELERLKVEVRNASWTLESTANSNNKPSHTPSESWGLLELFKKQNLS 501
NV+ RL+ R A+ S + S WGLL L + + S
Sbjct: 552 ANVTSRVAGRLQNCCRAAANYCRSL-QFQRRSSR--GRDWGLLPLLQPSSPS 600
Score = 99 (39.9 bits), Expect = 3.8e-28, Sum P(2) = 3.8e-28
Identities = 35/131 (26%), Positives = 58/131 (44%)
Query: 60 FVIVEMKDSQVTRRILNKCGHLDKSQVIPVRSPFLWFRANKNKTKLSDESDYAKINCDTH 119
F IVEM D++ +L++ H + VR P R K + +S D+H
Sbjct: 94 FAIVEMGDTETREAVLSQPQHSLGGHRLRVR-P----REQKEFQSPASKSPKGAAP-DSH 147
Query: 120 NVFPPTEDHVRECLASCNTITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCA 179
+ + LA + QM L + ++++ +LR LV ++ FP C
Sbjct: 148 QL--------AKALAEAPDVGAQMVKLVGLRELSEAERQLRSLVVALMQEVFMEFFPGCV 199
Query: 180 IFPFGSSVNNF 190
+ PFGSS+N+F
Sbjct: 200 VHPFGSSINSF 210
>RGD|1561043 [details] [associations]
symbol:Tut1 "terminal uridylyl transferase 1, U6 snRNA-specific"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=ISO;ISS] [GO:0003730 "mRNA 3'-UTR binding"
evidence=ISO;ISS] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=ISO;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=ISO;ISS] [GO:0005847 "mRNA
cleavage and polyadenylation specificity factor complex"
evidence=ISO;ISS] [GO:0006378 "mRNA polyadenylation"
evidence=ISO;ISS] [GO:0006379 "mRNA cleavage" evidence=ISO;ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016180 "snRNA
processing" evidence=ISO;ISS] [GO:0016607 "nuclear speck"
evidence=ISO;ISS] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0050265 "RNA uridylyltransferase activity" evidence=ISO;ISS]
[GO:0071044 "histone mRNA catabolic process" evidence=ISO;ISS]
InterPro:IPR000504 InterPro:IPR012677 InterPro:IPR015880
PROSITE:PS00028 PROSITE:PS50102 PROSITE:PS50157 SMART:SM00355
SMART:SM00360 Pfam:PF03828 RGD:1561043 GO:GO:0005524 GO:GO:0005730
GO:GO:0046872 GO:GO:0016607 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0006378 GO:GO:0003730 GO:GO:0006379 eggNOG:COG5260
GO:GO:0004652 InterPro:IPR002058 GO:GO:0050265
GeneTree:ENSGT00550000074490 GO:GO:0016180 CTD:64852
HOVERGEN:HBG079670 OrthoDB:EOG480HWB OMA:EQQGCAG EMBL:BC104695
IPI:IPI00371444 RefSeq:NP_001029073.1 UniGene:Rn.129389
ProteinModelPortal:Q3MHT4 SMR:Q3MHT4 IntAct:Q3MHT4 STRING:Q3MHT4
PhosphoSite:Q3MHT4 PRIDE:Q3MHT4 Ensembl:ENSRNOT00000027187
GeneID:499314 KEGG:rno:499314 UCSC:RGD:1561043 InParanoid:Q3MHT4
NextBio:702524 Genevestigator:Q3MHT4 GermOnline:ENSRNOG00000020047
Uniprot:Q3MHT4
Length = 866
Score = 287 (106.1 bits), Expect = 6.8e-28, Sum P(2) = 6.8e-28
Identities = 93/339 (27%), Positives = 164/339 (48%)
Query: 227 ERSQTLRHLETVGDLLQLFLPGCSQLFLPGCSQVKRILGARVPIIKYNHDMSALECDLSM 286
E+ + LE VG +L+ GC +PG +V+ + AR P++K+ H S L D+S+
Sbjct: 334 EKEEATAVLELVGSILR----GC----VPGVYRVQTVPSARRPVVKFCHRPSGLHGDISL 385
Query: 287 TNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDINLTNPTPGRWITNFSLTLLVLFYL 346
+N ALY + L L E+D RVRPLV+T++ WA+ L+ P + N++LTLLV+++L
Sbjct: 386 SNRLALYNSRFLNLCSEMDSRVRPLVYTLRCWAQHNGLSGGGP--LLNNYALTLLVIYFL 443
Query: 347 QS--VKVLPPLKLLIDEASLKDRRISEDGVNCTFVRDITKLQFHPSIPEQSTDSLTTLLF 404
Q+ VLP + L + + ++ DG +C+F +D ++L+ P + + L++LL
Sbjct: 444 QTRDPPVLPTVAQLTQRSG-EGEQVEVDGWDCSFPKDASRLE-----PSTNVEPLSSLLA 497
Query: 405 GFFEFYSQYDFNN------QGISLYLGSPIPKP-----EHGALYINNPLERGLNVSKNVS 453
FF S +D + +G +L + +P G + + +P + NV+ NV+
Sbjct: 498 QFFSCVSCWDLSGSLLSLREGQALMVAGGLPSDLWEGLRLGPMNLQDPFDLSHNVAANVT 557
Query: 454 FEELERLKVEVRNASWTLESTANSNNKPSHTPSESWGLLELFKKQNLSEKAKSVFFSEKS 513
+RL+ A+ S + WGLL L + + S + S
Sbjct: 558 SRVAKRLQSSCGAAASYCRSLQYQQRS---SRGRDWGLLPLLQPSSPSSLLSAKLIPLPS 614
Query: 514 RPKERMVSVEDLFSTETSEDSQVPVEPDFKKRKPISAQT 552
P ++++ L S E +E K+R+ A++
Sbjct: 615 APFPQIITA--LVSV-LREALGCHIEQGTKRRRSEGARS 650
Score = 103 (41.3 bits), Expect = 6.8e-28, Sum P(2) = 6.8e-28
Identities = 35/131 (26%), Positives = 59/131 (45%)
Query: 60 FVIVEMKDSQVTRRILNKCGHLDKSQVIPVRSPFLWFRANKNKTKLSDESDYAKINCDTH 119
F IVEM D +L++ H + VR P R K + +S ++ ++H
Sbjct: 94 FAIVEMGDISAREAVLSQPKHSLGGHTLRVR-P----REQKEFQSPASKSPKG-VDSNSH 147
Query: 120 NVFPPTEDHVRECLASCNTITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCA 179
+ + LA + QM L + ++++ +LR LV ++ + FP C
Sbjct: 148 QL--------AQALAEAADVGAQMVKLVELRELSEAERQLRTLVVALMQEVFTEFFPGCV 199
Query: 180 IFPFGSSVNNF 190
+ PFGSSVN+F
Sbjct: 200 VHPFGSSVNSF 210
>ZFIN|ZDB-GENE-050706-68 [details] [associations]
symbol:tut1 "terminal uridylyl transferase 1, U6
snRNA-specific" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0050265 "RNA
uridylyltransferase activity" evidence=IEA;ISS] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0003730 "mRNA 3'-UTR binding"
evidence=ISS] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=ISS] [GO:0006379 "mRNA cleavage" evidence=ISS]
[GO:0016607 "nuclear speck" evidence=ISS] [GO:0016180 "snRNA
processing" evidence=ISS] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=ISS]
[GO:0006378 "mRNA polyadenylation" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR007087 InterPro:IPR012677
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50102 PROSITE:PS50157
SMART:SM00355 SMART:SM00360 Pfam:PF03828 ZFIN:ZDB-GENE-050706-68
GO:GO:0005524 GO:GO:0005730 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0006378 GO:GO:0003730
GO:GO:0006379 eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058
GO:GO:0050265 GO:GO:0016180 HOGENOM:HOG000115998 CTD:64852
HOVERGEN:HBG079670 OrthoDB:EOG480HWB EMBL:BC098614 IPI:IPI00619608
RefSeq:NP_001025359.1 UniGene:Dr.80967 ProteinModelPortal:Q4KMD7
GeneID:564388 KEGG:dre:564388 InParanoid:Q4KMD7 NextBio:20885359
ArrayExpress:Q4KMD7 Uniprot:Q4KMD7
Length = 797
Score = 315 (115.9 bits), Expect = 2.0e-27, Sum P(3) = 2.0e-27
Identities = 93/310 (30%), Positives = 154/310 (49%)
Query: 133 LASCNTITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFPFGSSVNNFGK 192
L ++ +Q+ + ++ D ++R L+ ++ + FP C I PFGSSVN FG
Sbjct: 153 LCKAMSVNEQIQKVVESLELKDNEKKVRDLLVQLLQEVFTEFFPDCQIVPFGSSVNTFGL 212
Query: 193 XX-----XXXXXXXXXXXXXXXXNDQC--RLMFHCKS--SLGSERSQTLRHLETVGDLLQ 243
++Q C+S S+ S+ + + +L+
Sbjct: 213 HSCDLDLFLDLENTKVFQARAKSSEQTGENQSEDCRSEDSILSDIDLSTASPAEILELVA 272
Query: 244 LFLPGCSQLFLPGCSQVKRILGARVPIIKYNHDMSALECDLSMTNLTALYMAELLYLFGE 303
+ L C +PG +V+ + AR+P++K++H L+ D+++ N A+ + L L
Sbjct: 273 VILRKC----VPGVHKVQALSTARLPVVKFSHKELNLQGDITINNRLAVRNTKFLQLCSG 328
Query: 304 IDWRVRPLVFTIKKWAKDINLTNPT--PGRWITNFSLTLLVLFYLQS--VKVLPPLKLLI 359
ID R+RPLV+TI+ WAK L PG + N++LTLLV+F+LQ+ VLP + L
Sbjct: 329 IDSRLRPLVYTIRLWAKQKQLAGNLSGPGPLLNNYALTLLVIFFLQNRDPPVLPSVNQLK 388
Query: 360 DEASLKDRRISEDGVNCTFVRDITKLQFHPSIPEQSTDSLTTLLFGFFEFYSQYDFNNQG 419
+ A ++ E+ +CTF + P P ++T+ L TLLFGFF FYS++DF
Sbjct: 389 NMACEEEECAIEEW-DCTFPSQPFSV---P--PSKNTEDLCTLLFGFFTFYSKFDFPASV 442
Query: 420 ISLYLGSPIP 429
+SL G +P
Sbjct: 443 VSLRDGHVLP 452
Score = 66 (28.3 bits), Expect = 2.0e-27, Sum P(3) = 2.0e-27
Identities = 32/114 (28%), Positives = 48/114 (42%)
Query: 426 SPIPK----PEHGALYINNPLERGLNVSKNVSFEELERLKVEVRNASWTLESTANSNNKP 481
SP PK P G + + +P E NV+ N++ + K E A S
Sbjct: 471 SPKPKRSSAPRLGPMNVLDPFELNHNVAGNLNERTQKNFKRECCEAEKYCRSLQYQRKSA 530
Query: 482 SHTPSESWGLLELFKKQNLSEKAKSVFFSEKSRPK-ERMVSVEDLFSTETSEDS 534
+SWGL+ LF Q SE A S S+P+ E+++ V F + +S
Sbjct: 531 K---GKSWGLVRLFAPQ--SEAAAS------SQPRAEKVLEVSVPFKPASLPES 573
Score = 39 (18.8 bits), Expect = 2.0e-27, Sum P(3) = 2.0e-27
Identities = 6/20 (30%), Positives = 14/20 (70%)
Query: 532 EDSQVPVEPDFKKRKPISAQ 551
ED+ + V+ + K++P+S +
Sbjct: 635 EDTNIQVKGEAGKKRPLSVE 654
>MGI|MGI:1917294 [details] [associations]
symbol:Tut1 "terminal uridylyl transferase 1, U6
snRNA-specific" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISO]
[GO:0003730 "mRNA 3'-UTR binding" evidence=ISO] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006378 "mRNA polyadenylation"
evidence=ISO] [GO:0006379 "mRNA cleavage" evidence=ISO] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016180 "snRNA processing" evidence=ISO]
[GO:0016607 "nuclear speck" evidence=ISO] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0050265 "RNA
uridylyltransferase activity" evidence=ISO] InterPro:IPR000504
InterPro:IPR012677 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50102 PROSITE:PS50157 SMART:SM00355 SMART:SM00360
MGI:MGI:1917294 Pfam:PF03828 GO:GO:0005524 GO:GO:0005730
GO:GO:0046872 GO:GO:0016607 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0006378 GO:GO:0003730 GO:GO:0006379 eggNOG:COG5260
GO:GO:0004652 InterPro:IPR002058 GO:GO:0050265
GeneTree:ENSGT00550000074490 GO:GO:0016180 CTD:64852
HOVERGEN:HBG079670 OrthoDB:EOG480HWB EMBL:AK138418 EMBL:BC023900
EMBL:BC025499 IPI:IPI00153749 IPI:IPI00798562 RefSeq:NP_932110.1
UniGene:Mm.165979 ProteinModelPortal:Q8R3F9 SMR:Q8R3F9
STRING:Q8R3F9 PhosphoSite:Q8R3F9 PaxDb:Q8R3F9 PRIDE:Q8R3F9
Ensembl:ENSMUST00000096239 GeneID:70044 KEGG:mmu:70044
UCSC:uc008gog.1 UCSC:uc008goh.1 InParanoid:Q8R3F9 OMA:EQQGCAG
NextBio:330881 Bgee:Q8R3F9 Genevestigator:Q8R3F9
GermOnline:ENSMUSG00000071645 Uniprot:Q8R3F9
Length = 869
Score = 289 (106.8 bits), Expect = 2.8e-27, Sum P(2) = 2.8e-27
Identities = 89/307 (28%), Positives = 152/307 (49%)
Query: 227 ERSQTLRHLETVGDLLQLFLPGCSQLFLPGCSQVKRILGARVPIIKYNHDMSALECDLSM 286
E+ + LE VG +L+ GC +PG +V+ + AR P++K+ H S L D+S+
Sbjct: 336 EKEEAAAVLELVGSILR----GC----VPGVYRVQTVPSARRPVVKFCHRPSGLHGDVSL 387
Query: 287 TNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDINLTNPTPGRWITNFSLTLLVLFYL 346
+N ALY + L L E+D RVRPLV+T++ WA+ L+ P + N++LTLLV+++L
Sbjct: 388 SNRLALYNSRFLNLCSEMDGRVRPLVYTLRCWAQHNGLSGGGP--LLNNYALTLLVIYFL 445
Query: 347 QS--VKVLPPLKLLIDEASLKDRRISEDGVNCTFVRDITKLQFHPSIPEQSTDSLTTLLF 404
Q+ VLP + L A + ++ DG +C+F +D ++L+ P + + L++LL
Sbjct: 446 QTRDPPVLPTVAQLTQRAG-EGEQVEVDGWDCSFPKDASRLE-----PSTNVEPLSSLLA 499
Query: 405 GFFEFYSQYDFNNQGISLYLGSPIPKPEH-----------GALYINNPLERGLNVSKNVS 453
FF S D + +SL G P+ E G + + +P + NV+ NV+
Sbjct: 500 QFFSCVSCLDLSGSLLSLREGRPLMVAEGLPSDLWEGLRLGPMNLQDPFDLSHNVAANVT 559
Query: 454 FEELERLKVEVRNASWTLESTANSNNKPSHTPSESWGLLELFKKQNLSEKAKSVFFSEKS 513
+RL+ A+ + + + S WGLL L + + S + S
Sbjct: 560 GRVAKRLQ-SCCGAAASYCRSLQYQQRSSR--GRDWGLLPLLQPSSPSSLLSAKLIPLPS 616
Query: 514 RPKERMV 520
P +++
Sbjct: 617 APFPQVI 623
Score = 95 (38.5 bits), Expect = 2.8e-27, Sum P(2) = 2.8e-27
Identities = 34/131 (25%), Positives = 58/131 (44%)
Query: 60 FVIVEMKDSQVTRRILNKCGHLDKSQVIPVRSPFLWFRANKNKTKLSDESDYAKINCDTH 119
F IVEM D +L++ H + VR P R K + +S ++ +H
Sbjct: 94 FAIVEMGDISAREAVLSQPKHSLGGHGLRVR-P----REQKEFQSPASKSPKG-VDSSSH 147
Query: 120 NVFPPTEDHVRECLASCNTITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCA 179
+ + LA + QM L + ++++ +LR LV ++ + FP C
Sbjct: 148 QLV--------QALAEAADVGAQMVKLVELRELSEAERQLRNLVVALMQEVFTEFFPGCV 199
Query: 180 IFPFGSSVNNF 190
+ PFGS+VN+F
Sbjct: 200 VHPFGSTVNSF 210
>UNIPROTKB|F1MG03 [details] [associations]
symbol:TUT1 "Speckle targeted PIP5K1A-regulated poly(A)
polymerase" species:9913 "Bos taurus" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 InterPro:IPR015880 PROSITE:PS50102 SMART:SM00355
SMART:SM00360 Pfam:PF03828 GO:GO:0005730 GO:GO:0000166
GO:GO:0016607 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0006378
GO:GO:0003730 GO:GO:0005847 GO:GO:0006379 GO:GO:0004652
InterPro:IPR002058 GO:GO:0050265 GeneTree:ENSGT00550000074490
GO:GO:0016180 IPI:IPI00705794 UniGene:Bt.21690 OMA:EQQGCAG
EMBL:DAAA02063485 Ensembl:ENSBTAT00000015724 Uniprot:F1MG03
Length = 871
Score = 283 (104.7 bits), Expect = 3.3e-27, Sum P(2) = 3.3e-27
Identities = 88/292 (30%), Positives = 147/292 (50%)
Query: 223 SLGSERSQTLRHLETVGDLLQLFLPGCSQLFLPGCSQVKRILGARVPIIKYNHDMSALEC 282
+L E+++ LE VG +L+ GC +PG +V+ + AR P++K+ H S L
Sbjct: 329 ALKGEKAEGGAMLELVGSILR----GC----VPGVYRVQTVPSARCPVVKFCHRPSGLHG 380
Query: 283 DLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDINLTNPTPGRWITNFSLTLLV 342
D+S++N AL+ + L L E+D RVRPLV+T++ WA+ L+ P + N++LTLLV
Sbjct: 381 DISLSNRLALHNSRFLSLCSELDGRVRPLVYTLRCWAQGRGLSGSGP--LLNNYALTLLV 438
Query: 343 LFYLQS--VKVLPPLKLLIDEASLKDRRISEDGVNCTFVRDITKLQFHPSIPEQSTDSLT 400
+++LQ+ VLP + L +A ++ DG +C+F RD ++L+ P + + L+
Sbjct: 439 IYFLQTRDPPVLPTVSQLTQKAG---EQVEVDGWDCSFPRDASRLE-----PSTNKEPLS 490
Query: 401 TLLFGFFEFYSQYDFNNQGISLYLGSPIPK----PEH-------GALYINNPLERGLNVS 449
+LL FF S +D +SL G + P + G + + +P + NV+
Sbjct: 491 SLLAQFFSCVSCWDLRGSLLSLREGQALSVAGGLPSNLSEGLRLGPMNLQDPFDLSHNVA 550
Query: 450 KNVSFEELERLKVEVRNASWTLESTANSNNKPSHTPSESWGLLELFKKQNLS 501
NV+ RL+ R A+ S + WGLL L + + S
Sbjct: 551 ANVTSRVAGRLQNCCRAAANYCRSLQYQRRS---SRGRDWGLLPLLQPSSPS 599
Score = 101 (40.6 bits), Expect = 3.3e-27, Sum P(2) = 3.3e-27
Identities = 35/131 (26%), Positives = 59/131 (45%)
Query: 60 FVIVEMKDSQVTRRILNKCGHLDKSQVIPVRSPFLWFRANKNKTKLSDESDYAKINCDTH 119
F IVEM D +L++ H + + VR P R K + S ++ D+H
Sbjct: 94 FAIVEMGDLGAREAVLSQPQHSLGGRRLRVR-P----REQKEFQSPASRSP-KRVAPDSH 147
Query: 120 NVFPPTEDHVRECLASCNTITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCA 179
+ + LA + QM L + ++++ +LR LV ++ + FP C
Sbjct: 148 QLI--------KALAEAPDVEAQMVKLVGLRELSEAERQLRSLVVALMQEVFAEFFPGCV 199
Query: 180 IFPFGSSVNNF 190
+ PFGSS+N+F
Sbjct: 200 VHPFGSSINSF 210
>UNIPROTKB|Q1JPD6 [details] [associations]
symbol:TUT1 "Speckle targeted PIP5K1A-regulated poly(A)
polymerase" species:9913 "Bos taurus" [GO:0005730 "nucleolus"
evidence=ISS] [GO:0005847 "mRNA cleavage and polyadenylation
specificity factor complex" evidence=ISS] [GO:0016607 "nuclear
speck" evidence=ISS] [GO:0071044 "histone mRNA catabolic process"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=ISS] [GO:0006378 "mRNA polyadenylation" evidence=ISS]
[GO:0006379 "mRNA cleavage" evidence=ISS] [GO:0016180 "snRNA
processing" evidence=ISS] [GO:0003730 "mRNA 3'-UTR binding"
evidence=ISS] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=ISS] [GO:0050265 "RNA uridylyltransferase
activity" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50102 PROSITE:PS50157
SMART:SM00355 SMART:SM00360 Pfam:PF03828 GO:GO:0005524
GO:GO:0005730 GO:GO:0046872 GO:GO:0016607 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0006378 GO:GO:0003730 GO:GO:0006379
eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058 GO:GO:0050265
GO:GO:0016180 EMBL:BT025417 IPI:IPI00705794 RefSeq:NP_001073791.1
UniGene:Bt.21690 ProteinModelPortal:Q1JPD6 SMR:Q1JPD6 STRING:Q1JPD6
GeneID:616339 KEGG:bta:616339 CTD:64852 HOVERGEN:HBG079670
InParanoid:Q1JPD6 OrthoDB:EOG480HWB NextBio:20900088 Uniprot:Q1JPD6
Length = 871
Score = 283 (104.7 bits), Expect = 5.3e-27, Sum P(2) = 5.3e-27
Identities = 88/292 (30%), Positives = 147/292 (50%)
Query: 223 SLGSERSQTLRHLETVGDLLQLFLPGCSQLFLPGCSQVKRILGARVPIIKYNHDMSALEC 282
+L E+++ LE VG +L+ GC +PG +V+ + AR P++K+ H S L
Sbjct: 329 ALKGEKAEGGAMLELVGSILR----GC----VPGVYRVQTVPSARCPVVKFCHRPSGLHG 380
Query: 283 DLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDINLTNPTPGRWITNFSLTLLV 342
D+S++N AL+ + L L E+D RVRPLV+T++ WA+ L+ P + N++LTLLV
Sbjct: 381 DISLSNRLALHNSRFLSLCSELDGRVRPLVYTLRCWAQGRGLSGSGP--LLNNYALTLLV 438
Query: 343 LFYLQS--VKVLPPLKLLIDEASLKDRRISEDGVNCTFVRDITKLQFHPSIPEQSTDSLT 400
+++LQ+ VLP + L +A ++ DG +C+F RD ++L+ P + + L+
Sbjct: 439 IYFLQTRDPPVLPTVSQLTQKAG---EQVEVDGWDCSFPRDASRLE-----PSTNKEPLS 490
Query: 401 TLLFGFFEFYSQYDFNNQGISLYLGSPIPK----PEH-------GALYINNPLERGLNVS 449
+LL FF S +D +SL G + P + G + + +P + NV+
Sbjct: 491 SLLAQFFSCVSCWDLRGSLLSLREGQALSVAGGLPSNLSEGLRLGPMNLQDPFDLSHNVA 550
Query: 450 KNVSFEELERLKVEVRNASWTLESTANSNNKPSHTPSESWGLLELFKKQNLS 501
NV+ RL+ R A+ S + WGLL L + + S
Sbjct: 551 ANVTSRVAGRLQNCCRAAANYCRSLQYQRRS---SRGRDWGLLPLLQPSSPS 599
Score = 99 (39.9 bits), Expect = 5.3e-27, Sum P(2) = 5.3e-27
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 124 PTEDHVRECLASCNTITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFPF 183
P + + LA + QM L + ++++ +LR LV ++ + FP C + PF
Sbjct: 144 PDSHQLIKALAEAPDVEAQMVKLVGLRELSEAERQLRSLVVALMQEVFAEFFPGCVVHPF 203
Query: 184 GSSVNNF 190
GSS+N+F
Sbjct: 204 GSSINSF 210
>UNIPROTKB|H3BRB1 [details] [associations]
symbol:MIR3654 "Protein MIR3654" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 InterPro:IPR015880
PROSITE:PS50102 SMART:SM00355 SMART:SM00360 GO:GO:0000166
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622
EMBL:AP001363 EMBL:AP002990 ProteinModelPortal:H3BRB1 SMR:H3BRB1
Ensembl:ENST00000496634 HGNC:HGNC:38896 Bgee:H3BRB1 Uniprot:H3BRB1
Length = 525
Score = 249 (92.7 bits), Expect = 4.7e-24, Sum P(2) = 4.7e-24
Identities = 61/167 (36%), Positives = 102/167 (61%)
Query: 227 ERSQTLRHLETVGDLLQLFLPGCSQLFLPGCSQVKRILGARVPIIKYNHDMSALECDLSM 286
E+++ LE VG +L+ GC +PG +V+ + AR P++K+ H S L D+S+
Sbjct: 333 EKAEGAAMLELVGSILR----GC----VPGVYRVQTVPSARRPVVKFCHRPSGLHGDVSL 384
Query: 287 TNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDINLTNPTPGRWITNFSLTLLVLFYL 346
+N AL+ + L L E+D RVRPLV+T++ WA+ L+ P ++N++LTLLV+++L
Sbjct: 385 SNRLALHNSRFLSLCSELDGRVRPLVYTLRCWAQGRGLSGSGP--LLSNYALTLLVIYFL 442
Query: 347 QS--VKVLPPLKLLIDEASLKDRRISEDGVNCTFVRDITKLQFHPSI 391
Q+ VLP + L +A + ++ DG +C+F RD ++L+ PSI
Sbjct: 443 QTRDPPVLPTVSQLTQKAG-EGEQVEVDGWDCSFPRDASRLE--PSI 486
Score = 99 (39.9 bits), Expect = 4.7e-24, Sum P(2) = 4.7e-24
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 124 PTEDHVRECLASCNTITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFPF 183
P + + LA + QM L + ++++ +LR LV ++ + FP C + PF
Sbjct: 144 PDSHQLAKALAEAADVGAQMIKLVGLRELSEAERQLRSLVVALMQEVFTEFFPGCVVHPF 203
Query: 184 GSSVNNF 190
GSS+N+F
Sbjct: 204 GSSINSF 210
>UNIPROTKB|A9JTS5 [details] [associations]
symbol:tut1 "Speckle targeted PIP5K1A-regulated poly(A)
polymerase" species:8364 "Xenopus (Silurana) tropicalis"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0003730 "mRNA 3'-UTR
binding" evidence=ISS] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0006378 "mRNA polyadenylation" evidence=ISS]
[GO:0006379 "mRNA cleavage" evidence=ISS] [GO:0016180 "snRNA
processing" evidence=ISS] [GO:0016607 "nuclear speck" evidence=ISS]
[GO:0050265 "RNA uridylyltransferase activity" evidence=ISS]
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=ISS] InterPro:IPR000504 InterPro:IPR007087
InterPro:IPR012677 InterPro:IPR015880 Pfam:PF00076 PROSITE:PS00028
PROSITE:PS50102 PROSITE:PS50157 SMART:SM00355 SMART:SM00360
Pfam:PF03828 GO:GO:0005524 GO:GO:0005730 GO:GO:0046872
GO:GO:0016607 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0006378
GO:GO:0003730 GO:GO:0006379 eggNOG:COG5260 GO:GO:0004652
InterPro:IPR002058 GO:GO:0050265 GO:GO:0016180 HOGENOM:HOG000115998
HOVERGEN:HBG079670 EMBL:BC155457 UniGene:Str.66101
ProteinModelPortal:A9JTS5 STRING:A9JTS5 Xenbase:XB-GENE-491663
Uniprot:A9JTS5
Length = 843
Score = 241 (89.9 bits), Expect = 5.4e-22, Sum P(2) = 5.4e-22
Identities = 91/273 (33%), Positives = 130/273 (47%)
Query: 235 LETVGDLLQLFLPGCSQLFLPGCSQVKRILGARVPIIKYNHDMSALECDLSMTNLTALYM 294
LE VG +L+ C +PG V+ + AR P+I + H S L D+++ N AL
Sbjct: 303 LEVVGKVLR----HC----VPGVHGVQSVPTARRPVIHFQHKTSGLRGDVTLNNRLALRN 354
Query: 295 AELLYLFGEIDWRVRPLVFTIKKWAKDINLT-NPTPGR-WITNFSLTLLVLFYLQSVK-- 350
+ L L ++D RV LV+T++ WA+ L NP G + N++LTLLV F+LQ+
Sbjct: 355 SSFLRLCSDLDARVPQLVYTVRYWARVNQLAGNPFGGGPLLNNYALTLLVFFFLQTRNPP 414
Query: 351 VLPPLKLLIDEASLKDRRISEDGVNCTFVRDITKLQFHPSIPEQSTDSLTTLLFGFFEFY 410
VLP L L +E + + ++ DG +C+F D Q S +QS L++LL FF FY
Sbjct: 415 VLPTLVHLREETANEVPQVI-DGWDCSFPSD--PAQVKESGNQQS---LSSLLSEFFSFY 468
Query: 411 SQYDF--------NNQGISLYLGSPIPKPEHG----ALYINNPLERGLNVSKNVSFEELE 458
+ D N I L SP P G L I +P E NV NVS
Sbjct: 469 ASLDLHLLILCPCNGLTIPLPFSSPPPAWSEGFRLGPLNIQDPFELSHNVCGNVSSRAAR 528
Query: 459 RLKVEVRNASWTLESTANSNNKPSHTPSESWGL 491
R + A+ + T N N H+ S WG+
Sbjct: 529 RF-ISHCAAAARICRTPNYN---LHSTSHPWGI 557
Score = 96 (38.9 bits), Expect = 5.4e-22, Sum P(2) = 5.4e-22
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 123 PPTEDHVRECLASCNTITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFP 182
PP + + + L +C + QQ+ L ++ + + LR L+ ++ + FP C + P
Sbjct: 153 PPDPEALSKELLNCADVEQQIKKLVSLCSPSHHESHLRELLLSLLQETFTEFFPGCQLLP 212
Query: 183 FGSSVNNF 190
FGSSVN F
Sbjct: 213 FGSSVNGF 220
>TAIR|locus:2063937 [details] [associations]
symbol:HESO1 "HEN1 suppressor 1" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0016779
"nucleotidyltransferase activity" evidence=IDA] [GO:0071076 "RNA 3'
uridylation" evidence=IMP] GO:GO:0005634 GO:GO:0005737
EMBL:CP002685 GO:GO:0071076 GO:GO:0016779 UniGene:At.21484
UniGene:At.37137 EMBL:BT015881 EMBL:BT020198 IPI:IPI00527276
RefSeq:NP_181504.2 ProteinModelPortal:Q5XET5 SMR:Q5XET5
IntAct:Q5XET5 PRIDE:Q5XET5 EnsemblPlants:AT2G39740.1 GeneID:818559
KEGG:ath:AT2G39740 TAIR:At2g39740 InParanoid:Q5XET5 OMA:VEDPFEQ
PhylomeDB:Q5XET5 ProtClustDB:CLSN2681710 Genevestigator:Q5XET5
Uniprot:Q5XET5
Length = 511
Score = 244 (91.0 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 66/232 (28%), Positives = 121/232 (52%)
Query: 263 ILGARVPIIKYNHDMSALECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDI 322
++ ARVPI+K + CD+S+ NL L + L+ EID R R LV +K+WAK
Sbjct: 110 VIHARVPILKVVSGHQRISCDISIDNLDGLLKSRFLFWISEIDGRFRDLVLLVKEWAKAH 169
Query: 323 NLTNPTPGRWITNFSLTLLVLFYLQSV--KVLPPLKLLIDEASLKD----RRISEDGVNC 376
N+ + G + ++SL+LLV+F+ Q+ +LPPL+++ ++++ D R+ +E+ +
Sbjct: 170 NINDSKTGTF-NSYSLSLLVIFHFQTCVPAILPPLRVIYPKSAVDDLTGVRKTAEESIAQ 228
Query: 377 TFVRDITKLQFHPSIPEQSTDSLTTLLFGFFEFYSQYDFNNQ--GISLYLG--SPIPK-- 430
+I + + + + SL+ LL FF +S + Q G+ + G I
Sbjct: 229 VTAANIARFKSERA-KSVNRSSLSELLVSFFAKFSDINVKAQEFGVCPFTGRWETISSNT 287
Query: 431 ---PEHGALYINNPLERGLNVSKNVSFEELERLKVEVRNASWTLESTANSNN 479
P+ +L++ +P E+ +N +++VS L+R+ + S L S N N+
Sbjct: 288 TWLPKTYSLFVEDPFEQPVNAARSVSRRNLDRIAQVFQITSRRLVSECNRNS 339
>DICTYBASE|DDB_G0278425 [details] [associations]
symbol:DDB_G0278425 species:44689 "Dictyostelium
discoideum" [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] InterPro:IPR002934 Pfam:PF01909
dictyBase:DDB_G0278425 Pfam:PF03828 EMBL:AAFI02000023
eggNOG:COG5260 InterPro:IPR002058 GO:GO:0016779 RefSeq:XP_642359.1
EnsemblProtists:DDB0205447 GeneID:8621564 KEGG:ddi:DDB_G0278425
InParanoid:Q54Y43 OMA:TEESINT Uniprot:Q54Y43
Length = 1090
Score = 249 (92.7 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 63/190 (33%), Positives = 107/190 (56%)
Query: 252 LFLPGCSQVKRILGARVPIIKYNHDMSALECDLSMTNLTALYMAELLYLFGEIDWRVRPL 311
L + G ++ I ARVPI+K+ + L CD+ M N A+Y L+ + ID R++PL
Sbjct: 837 LKINGFQKILAIPTARVPIVKFKDPNTGLSCDICMNNRLAIYNTRLVQDYSMIDERMKPL 896
Query: 312 VFTIKKWAKDINLTNPTPGRWITNFSLTLLVLFYLQSVK--VLPPLKLLIDEASLKDRR- 368
V+ +K+WAK + P+ G +++++ LV+ +LQ+ + +LP L+ L + L + +
Sbjct: 897 VYVVKRWAKRRKINEPSLGT-LSSYAYINLVISFLQTRQPPILPCLQELANGPKLINGKE 955
Query: 369 -------ISEDGVNCTFVRDITKLQFHPSIPEQSTDSLTTLLFGFFEFYS-QYDFNNQGI 420
+ DG NC + DI+KL S + ++L +L+F FF+ YS ++ F NQ +
Sbjct: 956 YGDLLPDVMVDGFNCKYYNDISKLVGFGS---DNKETLGSLVFHFFQTYSREFSFMNQVV 1012
Query: 421 SLYLGSPIPK 430
S+ GSPI K
Sbjct: 1013 SIRTGSPIQK 1022
>MGI|MGI:2140950 [details] [associations]
symbol:Papd4 "PAP associated domain containing 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0071044 "histone
mRNA catabolic process" evidence=ISO] MGI:MGI:2140950 Pfam:PF03828
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0006397 GO:GO:0071044 eggNOG:COG5260 GO:GO:0004652
InterPro:IPR002058 GO:GO:0043631 GeneTree:ENSGT00550000074490
KO:K14079 HOVERGEN:HBG097533 CTD:167153 HOGENOM:HOG000088606
OMA:NQKTEAR OrthoDB:EOG4P2Q22 ChiTaRS:PAPD4 EMBL:AM419011
EMBL:BC016629 EMBL:AK033141 IPI:IPI00130216 IPI:IPI00896066
RefSeq:NP_598666.1 UniGene:Mm.242865 ProteinModelPortal:Q91YI6
SMR:Q91YI6 STRING:Q91YI6 PhosphoSite:Q91YI6 PRIDE:Q91YI6
DNASU:100715 Ensembl:ENSMUST00000048702 GeneID:100715
KEGG:mmu:100715 UCSC:uc007rkz.1 UCSC:uc007rla.1 InParanoid:Q91YI6
NextBio:354606 Bgee:Q91YI6 Genevestigator:Q91YI6 Uniprot:Q91YI6
Length = 484
Score = 209 (78.6 bits), Expect = 6.8e-16, Sum P(3) = 6.8e-16
Identities = 56/182 (30%), Positives = 98/182 (53%)
Query: 254 LPGCSQVKRILGARVPIIKYNHDMSALECDLSMTNLTALYMAELLYLFGEIDWRVRPLVF 313
L G + +++ A+VPI+K+ +S +E DL++ N + LL + ++ RVRPLV
Sbjct: 250 LSGYIERPQLIRAKVPIVKFRDKVSCVEFDLNVNNTVGIRNTFLLRTYAYLENRVRPLVL 309
Query: 314 TIKKWAKDINLTNPTPGRWITNFSLTLLVLFYLQSVK--VLPPLKLLIDEASLKDRRISE 371
IKKWA ++ + + G ++++SL L+VL YLQ++ +LP L+ + E+
Sbjct: 310 VIKKWASHHDINDASRGT-LSSYSLVLMVLHYLQTLPEPILPSLQKIYPESF-------S 361
Query: 372 DGVNCTFVRDITKLQFHPSIPEQSTDSLTTLLFGFFEFYS-QYDFNNQGISLYLGSPIPK 430
V V P + + + SL LL GF ++Y+ ++D+N Q IS+ IP+
Sbjct: 362 TSVQLHLVHH-APCNVPPYLSKNES-SLGDLLLGFLKYYATEFDWNTQMISVREAKAIPR 419
Query: 431 PE 432
P+
Sbjct: 420 PD 421
Score = 62 (26.9 bits), Expect = 6.8e-16, Sum P(3) = 6.8e-16
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 139 ITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFPFGSSVNNFG 191
++QQ+ L + + + + L Q++ + LFP +F GSS+N FG
Sbjct: 156 LSQQILELFETCQQQASDLKKKELCRAQLQREIQLLFPQSRLFLVGSSLNGFG 208
Score = 39 (18.8 bits), Expect = 6.8e-16, Sum P(3) = 6.8e-16
Identities = 10/50 (20%), Positives = 23/50 (46%)
Query: 6 NVFSFSKALKDPSGNVLSKYFVPSIEYRRLEAQRSILFGTVQSMHHYTLP 55
N F+ S L + +++ +++ R + + + +GTV + T P
Sbjct: 21 NFFALSPTLYSHQQLIDAQFNFQNVDLSRAVSLQPLTYGTVSPIQTSTSP 70
>RGD|1306438 [details] [associations]
symbol:Papd4 "PAP associated domain containing 4" species:10116
"Rattus norvegicus" [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=ISO;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0043631 "RNA polyadenylation" evidence=ISO;ISS] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0071044 "histone mRNA
catabolic process" evidence=ISO;ISS] Pfam:PF03828 RGD:1306438
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0006397 GO:GO:0071044 eggNOG:COG5260 GO:GO:0004652
InterPro:IPR002058 GO:GO:0043631 GeneTree:ENSGT00550000074490
KO:K14079 HOVERGEN:HBG097533 CTD:167153 HOGENOM:HOG000088606
OMA:NQKTEAR OrthoDB:EOG4P2Q22 EMBL:BC085771 IPI:IPI00372891
RefSeq:NP_001008373.1 UniGene:Rn.98477 ProteinModelPortal:Q5U315
STRING:Q5U315 Ensembl:ENSRNOT00000016135 GeneID:361878
KEGG:rno:361878 UCSC:RGD:1306438 InParanoid:Q5U315 NextBio:677940
Genevestigator:Q5U315 Uniprot:Q5U315
Length = 484
Score = 208 (78.3 bits), Expect = 9.1e-16, Sum P(3) = 9.1e-16
Identities = 56/182 (30%), Positives = 97/182 (53%)
Query: 254 LPGCSQVKRILGARVPIIKYNHDMSALECDLSMTNLTALYMAELLYLFGEIDWRVRPLVF 313
L G + +++ A+VPI+K+ +S +E DL++ N + LL + ++ RVRPLV
Sbjct: 250 LSGYIERPQLIRAKVPIVKFRDKVSCVEFDLNVNNTVGIRNTFLLRTYAYLENRVRPLVL 309
Query: 314 TIKKWAKDINLTNPTPGRWITNFSLTLLVLFYLQSVK--VLPPLKLLIDEASLKDRRISE 371
IKKWA + + + G ++++SL L+VL YLQ++ +LP L+ + E+
Sbjct: 310 VIKKWASHHEINDASRGT-LSSYSLVLMVLHYLQTLPEPILPSLQKIYPESF-------S 361
Query: 372 DGVNCTFVRDITKLQFHPSIPEQSTDSLTTLLFGFFEFYS-QYDFNNQGISLYLGSPIPK 430
V V P + + + SL LL GF ++Y+ ++D+N Q IS+ IP+
Sbjct: 362 TSVQLHLVHH-APCNVPPYLSKNES-SLGDLLLGFLKYYATEFDWNTQMISVREAKAIPR 419
Query: 431 PE 432
P+
Sbjct: 420 PD 421
Score = 62 (26.9 bits), Expect = 9.1e-16, Sum P(3) = 9.1e-16
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 139 ITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFPFGSSVNNFG 191
++QQ+ L + + + + L Q++ + LFP +F GSS+N FG
Sbjct: 156 LSQQILELFETCQQQASDLKKKELCRAQLQREIQLLFPQSRLFLVGSSLNGFG 208
Score = 39 (18.8 bits), Expect = 9.1e-16, Sum P(3) = 9.1e-16
Identities = 10/50 (20%), Positives = 23/50 (46%)
Query: 6 NVFSFSKALKDPSGNVLSKYFVPSIEYRRLEAQRSILFGTVQSMHHYTLP 55
N F+ S L + +++ +++ R + + + +GTV + T P
Sbjct: 21 NFFALSPTLYSHQQLIDAQFNFQNVDLSRAVSLQPLTYGTVSPIQTSTSP 70
>UNIPROTKB|Q6PIY7 [details] [associations]
symbol:PAPD4 "Poly(A) RNA polymerase GLD2" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IDA]
[GO:0031380 "nuclear RNA-directed RNA polymerase complex"
evidence=IC] [GO:0043631 "RNA polyadenylation" evidence=IDA]
[GO:0071044 "histone mRNA catabolic process" evidence=IMP]
Pfam:PF03828 GO:GO:0005524 GO:GO:0005737 GO:GO:0046872
GO:GO:0006397 EMBL:CH471084 GO:GO:0071044 eggNOG:COG5260
GO:GO:0004652 InterPro:IPR002058 GO:GO:0031380 GO:GO:0043631
KO:K14079 HOVERGEN:HBG097533 CTD:167153 HOGENOM:HOG000088606
OMA:NQKTEAR EMBL:AK095818 EMBL:BC026061 EMBL:BC047581
IPI:IPI00167560 IPI:IPI00895778 RefSeq:NP_001107865.1
RefSeq:NP_001107866.1 RefSeq:NP_776158.2 UniGene:Hs.418198
HSSP:Q86MV5 ProteinModelPortal:Q6PIY7 SMR:Q6PIY7 IntAct:Q6PIY7
STRING:Q6PIY7 PhosphoSite:Q6PIY7 DMDM:74737798 PaxDb:Q6PIY7
PRIDE:Q6PIY7 Ensembl:ENST00000296783 Ensembl:ENST00000423041
Ensembl:ENST00000428308 Ensembl:ENST00000453514 GeneID:167153
KEGG:hsa:167153 UCSC:uc003kga.2 UCSC:uc003kgb.2
GeneCards:GC05P078944 HGNC:HGNC:26776 MIM:614121 neXtProt:NX_Q6PIY7
PharmGKB:PA134918975 InParanoid:Q6PIY7 PhylomeDB:Q6PIY7
ChiTaRS:PAPD4 GenomeRNAi:167153 NextBio:88659 ArrayExpress:Q6PIY7
Bgee:Q6PIY7 CleanEx:HS_PAPD4 Genevestigator:Q6PIY7 Uniprot:Q6PIY7
Length = 484
Score = 209 (78.6 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 54/182 (29%), Positives = 99/182 (54%)
Query: 254 LPGCSQVKRILGARVPIIKYNHDMSALECDLSMTNLTALYMAELLYLFGEIDWRVRPLVF 313
L G + +++ A+VPI+K+ +S +E DL++ N+ + LL + ++ RVRPLV
Sbjct: 250 LSGYIERPQLIRAKVPIVKFRDKVSCVEFDLNVNNIVGIRNTFLLRTYAYLENRVRPLVL 309
Query: 314 TIKKWAKDINLTNPTPGRWITNFSLTLLVLFYLQSVK--VLPPLKLLIDEASLKDRRISE 371
IKKWA + + + G ++++SL L+VL YLQ++ +LP L+ + E+
Sbjct: 310 VIKKWASHHQINDASRGT-LSSYSLVLMVLHYLQTLPEPILPSLQKIYPESF-------S 361
Query: 372 DGVNCTFVRDITKLQFHPSIPEQSTDSLTTLLFGFFEFYS-QYDFNNQGISLYLGSPIPK 430
+ V P + + ++ L LL GF ++Y+ ++D+N+Q IS+ IP+
Sbjct: 362 PAIQLHLVHQ-APCNVPPYLSKNESN-LGDLLLGFLKYYATEFDWNSQMISVREAKAIPR 419
Query: 431 PE 432
P+
Sbjct: 420 PD 421
Score = 61 (26.5 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 139 ITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFPFGSSVNNFG 191
++QQ+ L + + + + L Q++ + LFP +F GSS+N FG
Sbjct: 156 LSQQILELFETCQQQISDLKKKELCRTQLQREIQLLFPQSRLFLVGSSLNGFG 208
>UNIPROTKB|E2RQN5 [details] [associations]
symbol:PAPD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071044 "histone mRNA catabolic process"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] Pfam:PF03828
GO:GO:0005634 GO:GO:0071044 GO:GO:0004652 InterPro:IPR002058
GO:GO:0043631 GeneTree:ENSGT00550000074490 OMA:NQKTEAR
EMBL:AAEX03002115 Ensembl:ENSCAFT00000014375 NextBio:20893469
Uniprot:E2RQN5
Length = 480
Score = 207 (77.9 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 53/182 (29%), Positives = 99/182 (54%)
Query: 254 LPGCSQVKRILGARVPIIKYNHDMSALECDLSMTNLTALYMAELLYLFGEIDWRVRPLVF 313
L G + +++ A+VPI+K+ +S +E DL++ N+ + LL + ++ RVRPLV
Sbjct: 246 LSGYIERPQLIRAKVPIVKFRDKVSCVEFDLNVNNIVGIRNTFLLRTYAYLENRVRPLVL 305
Query: 314 TIKKWAKDINLTNPTPGRWITNFSLTLLVLFYLQSVK--VLPPLKLLIDEASLKDRRISE 371
IKKWA + + + G ++++SL L+VL YLQ++ +LP ++ + E+
Sbjct: 306 VIKKWASHHEINDASRGT-LSSYSLVLMVLHYLQTLPEPILPSIQKIYPESF-------S 357
Query: 372 DGVNCTFVRDITKLQFHPSIPEQSTDSLTTLLFGFFEFYS-QYDFNNQGISLYLGSPIPK 430
+ V P + + ++ L LL GF ++Y+ ++D+N+Q IS+ IP+
Sbjct: 358 PAIQLHLVHQ-APCNVPPYLSKNESN-LGDLLLGFLKYYATEFDWNSQMISVREAKAIPR 415
Query: 431 PE 432
P+
Sbjct: 416 PD 417
Score = 61 (26.5 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 139 ITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFPFGSSVNNFG 191
++QQ+ L + + + + L Q++ + LFP +F GSS+N FG
Sbjct: 156 LSQQILELFEACQQQVSDLKKKELCRTQLQREIQLLFPQSRLFLVGSSLNGFG 208
>UNIPROTKB|Q2HJ44 [details] [associations]
symbol:PAPD4 "Poly(A) RNA polymerase GLD2" species:9913
"Bos taurus" [GO:0071044 "histone mRNA catabolic process"
evidence=ISS] [GO:0043631 "RNA polyadenylation" evidence=ISS]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] Pfam:PF03828 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0006397
GO:GO:0071044 eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058
GO:GO:0043631 GeneTree:ENSGT00550000074490 KO:K14079
HOVERGEN:HBG097533 EMBL:BT025394 EMBL:BC113319 IPI:IPI00702849
IPI:IPI00843674 RefSeq:NP_001039826.1 UniGene:Bt.92095
ProteinModelPortal:Q2HJ44 STRING:Q2HJ44 PRIDE:Q2HJ44
Ensembl:ENSBTAT00000008885 Ensembl:ENSBTAT00000048886 GeneID:533862
KEGG:bta:533862 CTD:167153 HOGENOM:HOG000088606 InParanoid:Q2HJ44
OMA:NQKTEAR OrthoDB:EOG4P2Q22 NextBio:20876175 Uniprot:Q2HJ44
Length = 484
Score = 208 (78.3 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 53/182 (29%), Positives = 100/182 (54%)
Query: 254 LPGCSQVKRILGARVPIIKYNHDMSALECDLSMTNLTALYMAELLYLFGEIDWRVRPLVF 313
L G + +++ A+VPI+K+ +S +E DL++ N+ + LL + ++ RVRPLV
Sbjct: 250 LSGYIERPQLIRAKVPIVKFRDKVSCVEFDLNVNNIVGIRNTFLLRTYAYLENRVRPLVL 309
Query: 314 TIKKWAKDINLTNPTPGRWITNFSLTLLVLFYLQSVK--VLPPLKLLIDEASLKDRRISE 371
IKKWA ++ + + G ++++SL L+VL YLQ++ +LP ++ + E+
Sbjct: 310 VIKKWASHHDINDASRGT-LSSYSLVLMVLHYLQTLPEPILPSIQKIYPESF-------S 361
Query: 372 DGVNCTFVRDITKLQFHPSIPEQSTDSLTTLLFGFFEFYS-QYDFNNQGISLYLGSPIPK 430
+ V P + + ++ L LL GF ++Y+ ++D+N+Q IS+ IP+
Sbjct: 362 PSIQLHLVHQ-APCNVPPYLSKNESN-LGDLLLGFLKYYATEFDWNSQMISVREAKAIPR 419
Query: 431 PE 432
P+
Sbjct: 420 PD 421
Score = 58 (25.5 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 139 ITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFPFGSSVNNFG 191
++QQ+ L + + + + L +++ + LFP +F GSS+N FG
Sbjct: 156 LSQQILELFEACQQQVSDLKKKELCRTELQREIQLLFPQSRLFLVGSSLNGFG 208
>UNIPROTKB|F1RF43 [details] [associations]
symbol:PAPD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071044 "histone mRNA catabolic process" evidence=IEA]
[GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] Pfam:PF03828
GO:GO:0005634 GO:GO:0071044 GO:GO:0004652 InterPro:IPR002058
GO:GO:0043631 GeneTree:ENSGT00550000074490 KO:K14079 CTD:167153
OMA:NQKTEAR EMBL:CU855670 EMBL:CU915633 RefSeq:XP_003123800.1
UniGene:Ssc.41247 Ensembl:ENSSSCT00000015417 GeneID:100512336
KEGG:ssc:100512336 Uniprot:F1RF43
Length = 484
Score = 205 (77.2 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 53/182 (29%), Positives = 99/182 (54%)
Query: 254 LPGCSQVKRILGARVPIIKYNHDMSALECDLSMTNLTALYMAELLYLFGEIDWRVRPLVF 313
L G + +++ A+VPI+K+ +S +E DL++ N+ + LL + ++ RVRPLV
Sbjct: 250 LSGYIERPQLIRAKVPIVKFRDKVSCVEFDLNVNNIVGIRNTFLLRTYAYLENRVRPLVL 309
Query: 314 TIKKWAKDINLTNPTPGRWITNFSLTLLVLFYLQSVK--VLPPLKLLIDEASLKDRRISE 371
IKKWA + + + G ++++SL L+VL YLQ++ +LP ++ + E+
Sbjct: 310 VIKKWASHHEINDASRGT-LSSYSLVLMVLHYLQTLPEPILPSIQKMYPESF-------S 361
Query: 372 DGVNCTFVRDITKLQFHPSIPEQSTDSLTTLLFGFFEFYS-QYDFNNQGISLYLGSPIPK 430
+ V P + + ++ L LL GF ++Y+ ++D+N+Q IS+ IP+
Sbjct: 362 PALQLHLVHQ-APYNVPPYLSKNESN-LGDLLLGFLKYYATEFDWNSQMISVREAKAIPR 419
Query: 431 PE 432
P+
Sbjct: 420 PD 421
Score = 59 (25.8 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 139 ITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFPFGSSVNNFG 191
++QQ+ L + + + + L +++ + LFP +F GSS+N FG
Sbjct: 156 LSQQIVELFEACQQQVSDLKKKELCRTELQREIQLLFPQSKLFLVGSSLNGFG 208
>UNIPROTKB|E9PKY2 [details] [associations]
symbol:ZCCHC11 "Terminal uridylyltransferase 4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001878 InterPro:IPR002934 Pfam:PF01909
PROSITE:PS50158 SMART:SM00343 Pfam:PF03828 GO:GO:0005737
GO:GO:0005730 GO:GO:0008270 GO:GO:0003676 EMBL:AL513218
InterPro:IPR002058 GO:GO:0016779 EMBL:AL138849 HGNC:HGNC:28981
ChiTaRS:ZCCHC11 EMBL:AL591167 IPI:IPI00975609
ProteinModelPortal:E9PKY2 SMR:E9PKY2 Ensembl:ENST00000528642
ArrayExpress:E9PKY2 Bgee:E9PKY2 Uniprot:E9PKY2
Length = 1203
Score = 212 (79.7 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 62/207 (29%), Positives = 109/207 (52%)
Query: 220 CKSSLGSERSQTLRHLETVGDLLQLFLPGCSQLFLPGCSQVKRILGARVPIIKYNHDMSA 279
C + G E ++ L E + +L ++ PG + I A+VPI+K+ H S
Sbjct: 942 CMTLEGHENAEKLNCKEIIENLAKILKRH------PGLRNILPITTAKVPIVKFEHRRSG 995
Query: 280 LECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDINLTNPTPGRWITNFSLT 339
LE D+S+ N A + +L + ID RV+ L +T+K +AK ++ + + G +++++
Sbjct: 996 LEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGS-LSSYAYI 1054
Query: 340 LLVLFYLQSVK--VLPPLKLLIDEASLKDRRISEDGVNCTFVRDITKLQFH-PSIPEQST 396
L+VL++LQ K V+P L+ + D + R + DG N F +L+ PS+ + +T
Sbjct: 1055 LMVLYFLQQRKPPVIPVLQEIFDGKQIPQRMV--DGWNAFFFDKTEELKKRLPSLGK-NT 1111
Query: 397 DSLTTLLFGFFEFYSQ-YDFNNQGISL 422
+SL L G FY++ +DF IS+
Sbjct: 1112 ESLGELWLGLLRFYTEEFDFKEYVISI 1138
Score = 113 (44.8 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 31/90 (34%), Positives = 46/90 (51%)
Query: 266 ARVPIIKYNHDMSALECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDINLT 325
A+VP++ S L C +S N A +LL G+I+ PLV + WAK +
Sbjct: 451 AKVPVVVCRDRKSGLLCRVSAGNDMACLTTDLLTALGKIEPVFIPLVLAFRYWAKLCYID 510
Query: 326 NPTPGRWITNFSLTLLVLFYLQSVKVLPPL 355
+ T G I ++ L+V+F+LQ K PPL
Sbjct: 511 SQTDGG-IPSYCFALMVMFFLQQRK--PPL 537
Score = 59 (25.8 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 17/68 (25%), Positives = 33/68 (48%)
Query: 123 PPTEDHVRECLASCNTITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFP 182
PP+ H LA+ + ++ H IT D + R+R + ++ ++ P C++
Sbjct: 346 PPSPAH----LAALSVAVIELAKEHGIT---DDDLRVRQEIVEEMSKVITTFLPECSLRL 398
Query: 183 FGSSVNNF 190
+GSS+ F
Sbjct: 399 YGSSLTRF 406
>FB|FBgn0038934 [details] [associations]
symbol:Gld2 species:7227 "Drosophila melanogaster"
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=ISS;IDA] [GO:0043005 "neuron projection" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007616 "long-term
memory" evidence=IMP] [GO:0005654 "nucleoplasm" evidence=IDA]
Pfam:PF03828 EMBL:AE014297 GO:GO:0005524 GO:GO:0005737
GO:GO:0005654 GO:GO:0046872 GO:GO:0006397 GO:GO:0043005
GO:GO:0007616 GO:GO:0003723 eggNOG:COG5260 GO:GO:0004652
InterPro:IPR002058 GO:GO:0043631 EMBL:AY122076 EMBL:BT044483
RefSeq:NP_651012.2 ProteinModelPortal:Q9VD44 SMR:Q9VD44
IntAct:Q9VD44 MINT:MINT-1691551 STRING:Q9VD44
EnsemblMetazoa:FBtr0305038 EnsemblMetazoa:FBtr0310204 GeneID:42602
KEGG:dme:Dmel_CG5732 UCSC:CG5732-RA CTD:42602 FlyBase:FBgn0038934
GeneTree:ENSGT00550000074490 InParanoid:Q9VD44 KO:K14079
OMA:RYWREFF OrthoDB:EOG40GB69 PhylomeDB:Q9VD44 GenomeRNAi:42602
NextBio:829642 Bgee:Q9VD44 Uniprot:Q9VD44
Length = 1364
Score = 220 (82.5 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 85/285 (29%), Positives = 138/285 (48%)
Query: 212 DQCRLMFHCKSSLGSERSQTLRHLETVGDLLQLFLPGCSQLFLPGCSQVKRILGARVPII 271
D C M C + R + + HL + +LL G + +F Q ++ ARVPI+
Sbjct: 995 DIC--MLACTNPNIDSRMEAVYHLHVMKELL-----GRTNMF-----QDFNLIEARVPIL 1042
Query: 272 KYNHDMSALECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDINLTNPTPGR 331
++ +E D++ N + LLY + ++DWRVRP+ T+K+WA+ N+ N
Sbjct: 1043 RFTDRCHKVEVDINFNNSVGIRNTHLLYCYSQLDWRVRPMALTVKQWAQYHNINN-AKNM 1101
Query: 332 WITNFSLTLLVLFYLQ---SVKVLPPLKLLIDEASLKDRRISEDGVNCTFVRDITKLQFH 388
I+++SL L+V+ +LQ S VLP L L E K + + +V D+ ++
Sbjct: 1102 TISSYSLMLMVIHFLQVGASPPVLPCLHNLYPE---KFGLLQPNDFG--YV-DMNEVM-- 1153
Query: 389 PSIPEQSTDSLTT--LLFGFFEFYSQYDFNNQGISLYLGS--PI--------PKPE-H-- 433
P QS +S T LL F +YS +D+ IS+ +G PI PK + H
Sbjct: 1154 --APYQSDNSQTLGDLLLSFLHYYSVFDYGKYAISIRVGGVLPIEVCRAATAPKNDIHQW 1211
Query: 434 GALYINNPLERGLNVSKNV-SFEELERLKVEVRNASWT-LESTAN 476
L I P ++ N +++V + ER+K + AS+ L+ST N
Sbjct: 1212 NELCIEEPFDQ-TNTARSVYDTDTFERIKT-IFVASYRRLDSTRN 1254
>UNIPROTKB|F1PFM0 [details] [associations]
symbol:ZCCHC11 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0070102 "interleukin-6-mediated
signaling pathway" evidence=IEA] [GO:0050265 "RNA
uridylyltransferase activity" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0032088
"negative regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0031664 "regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IEA]
[GO:0031123 "RNA 3'-end processing" evidence=IEA] [GO:0031054
"pre-miRNA processing" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0010587 "miRNA catabolic process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0001816 "cytokine production"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001878
InterPro:IPR002934 Pfam:PF00098 Pfam:PF01909 PROSITE:PS50158
SMART:SM00343 Pfam:PF03828 GO:GO:0005737 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 GO:GO:0031054
GO:GO:0032088 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0019827
GO:GO:0001816 InterPro:IPR002058 GO:GO:0050265
GeneTree:ENSGT00550000074490 GO:GO:0010587 GO:GO:0031123
GO:GO:0031664 EMBL:AAEX03009705 Ensembl:ENSCAFT00000006009
Uniprot:F1PFM0
Length = 1635
Score = 209 (78.6 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 61/207 (29%), Positives = 109/207 (52%)
Query: 220 CKSSLGSERSQTLRHLETVGDLLQLFLPGCSQLFLPGCSQVKRILGARVPIIKYNHDMSA 279
C + G E ++ L E + +L ++ PG + I A+VPI+K+ H S
Sbjct: 1003 CMTLEGHENAEKLNCKEIIENLAKILKRH------PGLRNILPITTAKVPIVKFEHRRSG 1056
Query: 280 LECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDINLTNPTPGRWITNFSLT 339
LE D+S+ N A + +L + ID RV+ L +T+K +AK ++ + + G +++++
Sbjct: 1057 LEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGS-LSSYAYI 1115
Query: 340 LLVLFYLQSVK--VLPPLKLLIDEASLKDRRISEDGVNCTFVRDITKLQFH-PSIPEQST 396
L+VL++LQ K V+P L+ + D + R + DG N F +L+ PS+ + +T
Sbjct: 1116 LMVLYFLQQRKPPVIPVLQEIFDGKQIPQRMV--DGWNAFFFDKTEELKKRLPSLGK-NT 1172
Query: 397 DSLTTLLFGFFEFYSQ-YDFNNQGISL 422
++L L G FY++ +DF IS+
Sbjct: 1173 ETLGELWLGLLRFYTEEFDFKEYVISI 1199
Score = 114 (45.2 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 31/90 (34%), Positives = 46/90 (51%)
Query: 266 ARVPIIKYNHDMSALECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDINLT 325
A+VP++ S L C +S N A +LL G+++ PLV + WAK +
Sbjct: 443 AKVPVVVCKDRKSGLLCRVSAGNDMACLTTDLLAALGKMEPVFTPLVLAFRYWAKLCYID 502
Query: 326 NPTPGRWITNFSLTLLVLFYLQSVKVLPPL 355
+ T G I ++ L+VLF+LQ K PPL
Sbjct: 503 SQTDGG-IPSYCFALMVLFFLQQRK--PPL 529
Score = 63 (27.2 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 18/68 (26%), Positives = 33/68 (48%)
Query: 123 PPTEDHVRECLASCNTITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFP 182
PPT H LA+ + ++ H IT D + R+R + ++ ++ P C++
Sbjct: 338 PPTPAH----LAALSVAVIELAKEHGIT---DDDLRVRQEIVEEMSKVITTFLPECSLRL 390
Query: 183 FGSSVNNF 190
+GSS+ F
Sbjct: 391 YGSSLTKF 398
>UNIPROTKB|J9P9X1 [details] [associations]
symbol:ZCCHC11 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001878 InterPro:IPR002934 Pfam:PF00098 Pfam:PF01909
PROSITE:PS50158 SMART:SM00343 Pfam:PF03828 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR002058 GO:GO:0016779 GeneTree:ENSGT00550000074490
OMA:TDCRSNL EMBL:AAEX03009705 Ensembl:ENSCAFT00000048947
Uniprot:J9P9X1
Length = 1647
Score = 209 (78.6 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 61/207 (29%), Positives = 109/207 (52%)
Query: 220 CKSSLGSERSQTLRHLETVGDLLQLFLPGCSQLFLPGCSQVKRILGARVPIIKYNHDMSA 279
C + G E ++ L E + +L ++ PG + I A+VPI+K+ H S
Sbjct: 1015 CMTLEGHENAEKLNCKEIIENLAKILKRH------PGLRNILPITTAKVPIVKFEHRRSG 1068
Query: 280 LECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDINLTNPTPGRWITNFSLT 339
LE D+S+ N A + +L + ID RV+ L +T+K +AK ++ + + G +++++
Sbjct: 1069 LEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGS-LSSYAYI 1127
Query: 340 LLVLFYLQSVK--VLPPLKLLIDEASLKDRRISEDGVNCTFVRDITKLQFH-PSIPEQST 396
L+VL++LQ K V+P L+ + D + R + DG N F +L+ PS+ + +T
Sbjct: 1128 LMVLYFLQQRKPPVIPVLQEIFDGKQIPQRMV--DGWNAFFFDKTEELKKRLPSLGK-NT 1184
Query: 397 DSLTTLLFGFFEFYSQ-YDFNNQGISL 422
++L L G FY++ +DF IS+
Sbjct: 1185 ETLGELWLGLLRFYTEEFDFKEYVISI 1211
Score = 114 (45.2 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 31/90 (34%), Positives = 46/90 (51%)
Query: 266 ARVPIIKYNHDMSALECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDINLT 325
A+VP++ S L C +S N A +LL G+++ PLV + WAK +
Sbjct: 455 AKVPVVVCKDRKSGLLCRVSAGNDMACLTTDLLAALGKMEPVFTPLVLAFRYWAKLCYID 514
Query: 326 NPTPGRWITNFSLTLLVLFYLQSVKVLPPL 355
+ T G I ++ L+VLF+LQ K PPL
Sbjct: 515 SQTDGG-IPSYCFALMVLFFLQQRK--PPL 541
Score = 63 (27.2 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 18/68 (26%), Positives = 33/68 (48%)
Query: 123 PPTEDHVRECLASCNTITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFP 182
PPT H LA+ + ++ H IT D + R+R + ++ ++ P C++
Sbjct: 350 PPTPAH----LAALSVAVIELAKEHGIT---DDDLRVRQEIVEEMSKVITTFLPECSLRL 402
Query: 183 FGSSVNNF 190
+GSS+ F
Sbjct: 403 YGSSLTKF 410
>UNIPROTKB|Q5TAX3 [details] [associations]
symbol:ZCCHC11 "Terminal uridylyltransferase 4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001816 "cytokine production" evidence=IEA] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=IEA] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0070102
"interleukin-6-mediated signaling pathway" evidence=IEA]
[GO:0031054 "pre-miRNA processing" evidence=IMP] [GO:0050265 "RNA
uridylyltransferase activity" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010586 "miRNA metabolic process" evidence=ISS] [GO:0071044
"histone mRNA catabolic process" evidence=IMP] [GO:0019827 "stem
cell maintenance" evidence=IMP] [GO:0010587 "miRNA catabolic
process" evidence=IMP] [GO:0031123 "RNA 3'-end processing"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001878 InterPro:IPR002934 Pfam:PF00098 Pfam:PF01909
PROSITE:PS00028 PROSITE:PS50158 SMART:SM00343 Pfam:PF03828
GO:GO:0005737 GO:GO:0005730 GO:GO:0046872 EMBL:CH471059
GO:GO:0008270 GO:GO:0003676 GO:GO:0031054 GO:GO:0032088
Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0019827 GO:GO:0001816
eggNOG:COG5260 InterPro:IPR002058 GO:GO:0050265 GO:GO:0010587
GO:GO:0031123 GO:GO:0031664 EMBL:AK303532 EMBL:AL138849
EMBL:BC131734 EMBL:D83776 IPI:IPI00289861 IPI:IPI00550431
RefSeq:NP_001009881.1 RefSeq:NP_056084.1 UniGene:Hs.655407
ProteinModelPortal:Q5TAX3 SMR:Q5TAX3 IntAct:Q5TAX3 STRING:Q5TAX3
PhosphoSite:Q5TAX3 DMDM:116242850 PaxDb:Q5TAX3 PRIDE:Q5TAX3
DNASU:23318 Ensembl:ENST00000257177 Ensembl:ENST00000355809
Ensembl:ENST00000371544 GeneID:23318 KEGG:hsa:23318 UCSC:uc001ctx.2
CTD:23318 GeneCards:GC01M052888 HGNC:HGNC:28981 HPA:HPA027412
HPA:HPA027973 MIM:613692 neXtProt:NX_Q5TAX3 PharmGKB:PA134918178
KO:K13291 OrthoDB:EOG4DZ1TJ ChiTaRS:ZCCHC11 GenomeRNAi:23318
NextBio:45208 ArrayExpress:Q5TAX3 Bgee:Q5TAX3 CleanEx:HS_ZCCHC11
Genevestigator:Q5TAX3 GermOnline:ENSG00000134744 Uniprot:Q5TAX3
Length = 1644
Score = 212 (79.7 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 62/207 (29%), Positives = 109/207 (52%)
Query: 220 CKSSLGSERSQTLRHLETVGDLLQLFLPGCSQLFLPGCSQVKRILGARVPIIKYNHDMSA 279
C + G E ++ L E + +L ++ PG + I A+VPI+K+ H S
Sbjct: 1013 CMTLEGHENAEKLNCKEIIENLAKILKRH------PGLRNILPITTAKVPIVKFEHRRSG 1066
Query: 280 LECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDINLTNPTPGRWITNFSLT 339
LE D+S+ N A + +L + ID RV+ L +T+K +AK ++ + + G +++++
Sbjct: 1067 LEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGS-LSSYAYI 1125
Query: 340 LLVLFYLQSVK--VLPPLKLLIDEASLKDRRISEDGVNCTFVRDITKLQFH-PSIPEQST 396
L+VL++LQ K V+P L+ + D + R + DG N F +L+ PS+ + +T
Sbjct: 1126 LMVLYFLQQRKPPVIPVLQEIFDGKQIPQRMV--DGWNAFFFDKTEELKKRLPSLGK-NT 1182
Query: 397 DSLTTLLFGFFEFYSQ-YDFNNQGISL 422
+SL L G FY++ +DF IS+
Sbjct: 1183 ESLGELWLGLLRFYTEEFDFKEYVISI 1209
Score = 59 (25.8 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 17/68 (25%), Positives = 33/68 (48%)
Query: 123 PPTEDHVRECLASCNTITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFP 182
PP+ H LA+ + ++ H IT D + R+R + ++ ++ P C++
Sbjct: 346 PPSPAH----LAALSVAVIELAKEHGIT---DDDLRVRQEIVEEMSKVITTFLPECSLRL 398
Query: 183 FGSSVNNF 190
+GSS+ F
Sbjct: 399 YGSSLTRF 406
>FB|FBgn0260780 [details] [associations]
symbol:wisp "wispy" species:7227 "Drosophila melanogaster"
[GO:0007017 "microtubule-based process" evidence=IMP] [GO:0007052
"mitotic spindle organization" evidence=IMP] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0035046
"pronuclear migration" evidence=IMP] [GO:0007344 "pronuclear
fusion" evidence=IMP] [GO:0035044 "sperm aster formation"
evidence=IMP] [GO:0007056 "spindle assembly involved in female
meiosis" evidence=IMP] [GO:0007343 "egg activation" evidence=IMP]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=ISS;IDA] [GO:0006378 "mRNA polyadenylation" evidence=IMP]
[GO:0001556 "oocyte maturation" evidence=IMP] [GO:0043631 "RNA
polyadenylation" evidence=IDA] [GO:0002805 "regulation of
antimicrobial peptide biosynthetic process" evidence=IMP]
Pfam:PF03828 GO:GO:0005524 GO:GO:0035046 GO:GO:0005737
GO:GO:0007052 GO:GO:0046872 EMBL:AE014298 GO:GO:0006378
GO:GO:0003723 GO:GO:0001556 GO:GO:0008298 GO:GO:0002805
GO:GO:0007344 eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058
GO:GO:0007343 GeneTree:ENSGT00550000074490 KO:K14079
RefSeq:NP_572766.1 UniGene:Dm.6637 ProteinModelPortal:Q9VYS4
SMR:Q9VYS4 IntAct:Q9VYS4 MINT:MINT-300598 STRING:Q9VYS4
PRIDE:Q9VYS4 EnsemblMetazoa:FBtr0073573 GeneID:32152
KEGG:dme:Dmel_CG15737 UCSC:CG15737-RA CTD:32152 FlyBase:FBgn0260780
InParanoid:Q9VYS4 OMA:DSSDIDM OrthoDB:EOG4S7H5K PhylomeDB:Q9VYS4
GenomeRNAi:32152 NextBio:777126 Bgee:Q9VYS4 GO:GO:0035044
GO:GO:0007056 Uniprot:Q9VYS4
Length = 1373
Score = 218 (81.8 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 57/170 (33%), Positives = 89/170 (52%)
Query: 263 ILGARVPIIKYNHDMSALECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDI 322
++ ARVPI+++ + +E DL+ N + LL L+ ++DWR RPLV +K WA+
Sbjct: 1083 LIEARVPILRFKDISNGIEVDLNFNNCVGIKNTYLLQLYAQMDWRTRPLVVIVKLWAQYH 1142
Query: 323 NLTNPTPGRWITNFSLTLLVLFYLQSV---KVLPPLKLLIDEASLKDRRISEDGVNCTFV 379
++ N I+++SL L+VL YLQ VLP L L E K + +D ++ +
Sbjct: 1143 DI-NDAKRMTISSYSLVLMVLHYLQHACVPHVLPCLHSLYPE---KFQLGQQDCLDLDLI 1198
Query: 380 RDITKLQFHPSIPEQSTDSLTTLLFGFFEFYSQYDFNNQGISLYLGSPIP 429
I Q +T +L L GFF++YS +DF N IS+ G +P
Sbjct: 1199 EPIEPYQ------ALNTQTLGEHLLGFFKYYSTFDFRNFAISIRTGGVLP 1242
>WB|WBGene00001596 [details] [associations]
symbol:gld-2 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0051302 "regulation of cell
division" evidence=IMP] [GO:0006997 "nucleus organization"
evidence=IMP] [GO:0043631 "RNA polyadenylation" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] [GO:0031379 "RNA-directed RNA polymerase complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IDA] Pfam:PF03828 GO:GO:0005524 GO:GO:0009792
GO:GO:0007126 GO:GO:0002009 GO:GO:0006898 GO:GO:0040010
GO:GO:0006915 GO:GO:0046872 GO:GO:0006397 GO:GO:0042127
GO:GO:0040035 GO:GO:0040020 GO:GO:0006997 GO:GO:0051302
GO:GO:0043186 eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058
GO:GO:0043631 GeneTree:ENSGT00550000074490 KO:K14079 EMBL:AY125085
EMBL:FO081588 PIR:T32274 PIR:T32275 RefSeq:NP_001021844.1
RefSeq:NP_001021845.1 RefSeq:NP_491841.2 RefSeq:NP_491842.2
UniGene:Cel.9280 ProteinModelPortal:O17087 IntAct:O17087
STRING:O17087 PaxDb:O17087 PRIDE:O17087 EnsemblMetazoa:ZC308.1a
GeneID:172338 KEGG:cel:CELE_ZC308.1 UCSC:ZC308.1a CTD:172338
WormBase:ZC308.1a WormBase:ZC308.1b WormBase:ZC308.1c
WormBase:ZC308.1d InParanoid:O17087 OMA:MEDWELD NextBio:875101
GO:GO:0031379 Uniprot:O17087
Length = 1113
Score = 186 (70.5 bits), Expect = 6.5e-14, Sum P(2) = 6.5e-14
Identities = 49/175 (28%), Positives = 89/175 (50%)
Query: 261 KRILGARVPIIKYNH--DMSALECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKW 318
++++ A+VPI++ N + DL+ N A+ LL + DWRVRPLV +K+W
Sbjct: 644 QKLILAKVPILRINFAAPFDDITVDLNANNSVAIRNTHLLCYYSSYDWRVRPLVSVVKEW 703
Query: 319 AKDINLTNPTPGRWITNFSLTLLVLFYLQS--VKVLPPLKLLIDEASLKDRRISEDGVNC 376
AK + + + T++SL L+V+ +LQ KVLP L+ ++ +N
Sbjct: 704 AKRKGINDANKSSF-TSYSLVLMVIHFLQCGPTKVLPNLQQSYPNRF--SNKVDVRTLNV 760
Query: 377 TFVRDITKLQFHPSIPEQSTDSLTTLLFGFFEFYS-QYDFNNQGISLYLGSPIPK 430
T + S+ E++T L LL GF ++Y+ +++++ IS+ G + +
Sbjct: 761 TMALEEVADDIDQSLSEKTT--LGELLIGFLDYYANEFNYDRDAISIRQGRRVER 813
Score = 80 (33.2 bits), Expect = 6.5e-14, Sum P(2) = 6.5e-14
Identities = 19/69 (27%), Positives = 36/69 (52%)
Query: 123 PPTEDHVRECLASCNTITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFP 182
PPT + E L+ + +++++ HN D + + + + A+S +FPL ++
Sbjct: 534 PPTS-LLSEPLSRMDVLSEKIWDYHNKVSQTDEMLQRKLHLRDMLYTAISPVFPLSGLYV 592
Query: 183 FGSSVNNFG 191
GSS+N FG
Sbjct: 593 VGSSLNGFG 601
>UNIPROTKB|O17087 [details] [associations]
symbol:gld-2 "Poly(A) RNA polymerase gld-2" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF03828 GO:GO:0005524 GO:GO:0009792
GO:GO:0007126 GO:GO:0002009 GO:GO:0006898 GO:GO:0040010
GO:GO:0006915 GO:GO:0046872 GO:GO:0006397 GO:GO:0042127
GO:GO:0040035 GO:GO:0040020 GO:GO:0006997 GO:GO:0051302
GO:GO:0043186 eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058
GO:GO:0043631 GeneTree:ENSGT00550000074490 KO:K14079 EMBL:AY125085
EMBL:FO081588 PIR:T32274 PIR:T32275 RefSeq:NP_001021844.1
RefSeq:NP_001021845.1 RefSeq:NP_491841.2 RefSeq:NP_491842.2
UniGene:Cel.9280 ProteinModelPortal:O17087 IntAct:O17087
STRING:O17087 PaxDb:O17087 PRIDE:O17087 EnsemblMetazoa:ZC308.1a
GeneID:172338 KEGG:cel:CELE_ZC308.1 UCSC:ZC308.1a CTD:172338
WormBase:ZC308.1a WormBase:ZC308.1b WormBase:ZC308.1c
WormBase:ZC308.1d InParanoid:O17087 OMA:MEDWELD NextBio:875101
GO:GO:0031379 Uniprot:O17087
Length = 1113
Score = 186 (70.5 bits), Expect = 6.5e-14, Sum P(2) = 6.5e-14
Identities = 49/175 (28%), Positives = 89/175 (50%)
Query: 261 KRILGARVPIIKYNH--DMSALECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKW 318
++++ A+VPI++ N + DL+ N A+ LL + DWRVRPLV +K+W
Sbjct: 644 QKLILAKVPILRINFAAPFDDITVDLNANNSVAIRNTHLLCYYSSYDWRVRPLVSVVKEW 703
Query: 319 AKDINLTNPTPGRWITNFSLTLLVLFYLQS--VKVLPPLKLLIDEASLKDRRISEDGVNC 376
AK + + + T++SL L+V+ +LQ KVLP L+ ++ +N
Sbjct: 704 AKRKGINDANKSSF-TSYSLVLMVIHFLQCGPTKVLPNLQQSYPNRF--SNKVDVRTLNV 760
Query: 377 TFVRDITKLQFHPSIPEQSTDSLTTLLFGFFEFYS-QYDFNNQGISLYLGSPIPK 430
T + S+ E++T L LL GF ++Y+ +++++ IS+ G + +
Sbjct: 761 TMALEEVADDIDQSLSEKTT--LGELLIGFLDYYANEFNYDRDAISIRQGRRVER 813
Score = 80 (33.2 bits), Expect = 6.5e-14, Sum P(2) = 6.5e-14
Identities = 19/69 (27%), Positives = 36/69 (52%)
Query: 123 PPTEDHVRECLASCNTITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFP 182
PPT + E L+ + +++++ HN D + + + + A+S +FPL ++
Sbjct: 534 PPTS-LLSEPLSRMDVLSEKIWDYHNKVSQTDEMLQRKLHLRDMLYTAISPVFPLSGLYV 592
Query: 183 FGSSVNNFG 191
GSS+N FG
Sbjct: 593 VGSSLNGFG 601
>WB|WBGene00009284 [details] [associations]
symbol:F31C3.2 species:6239 "Caenorhabditis elegans"
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] Pfam:PF03828 GO:GO:0045132
InterPro:IPR002058 EMBL:Z92784 GeneTree:ENSGT00550000074490
EMBL:Z81526 UniGene:Cel.7025 GeneID:173373 KEGG:cel:CELE_F31C3.2
CTD:173373 NextBio:879379 RefSeq:NP_001021434.1
ProteinModelPortal:G5EFR3 SMR:G5EFR3 IntAct:G5EFR3 PRIDE:G5EFR3
EnsemblMetazoa:F31C3.2b WormBase:F31C3.2b OMA:PFDAINT
Uniprot:G5EFR3
Length = 808
Score = 212 (79.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 65/227 (28%), Positives = 115/227 (50%)
Query: 262 RILGARVPIIKY--NHDMSALECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWA 319
+++ A+VPI+K N + +E D+++ N+ +Y + L++ + D R+ L +K WA
Sbjct: 577 QLVPAKVPIVKMILNGEFDGIEVDINVNNIAGIYNSHLIHYYSLTDARLPALALLVKHWA 636
Query: 320 KDINLTNPTPGRWITNFSLTLLVLFYLQ---SVKVLPPLKLLIDEASLKDRRISEDGVNC 376
+ N G ++ +++ LLV+ YLQ + V+P L+ L DR++ + +
Sbjct: 637 MVTGINNAQDG-FLNSYTTILLVVHYLQCGVTPAVIPNLQYLFPHKF--DRKLPLNEL-- 691
Query: 377 TFVRDIT-KLQFHPSIPEQSTDSLTTLLFGFFEFYSQYDFNNQGISLYLGSPIPKPEHGA 435
DI KL P+ P +T SL LL GFF++Y+++DF N G S+ G IP+
Sbjct: 692 LLFGDIADKL---PTSPP-NTWSLGELLIGFFQYYNEFDFTNFGFSIRSGQVIPRENLPR 747
Query: 436 LYINNPL--ER---GLNVSKNV-SFEELERLKVEVRNASWTLESTAN 476
IN+P+ E +N ++ V ++ +K R A + S N
Sbjct: 748 DLINSPIVVEEPFDAINTARTVRDVSHMKSIKSAFRCAVQIISSNKN 794
>UNIPROTKB|I3L9X5 [details] [associations]
symbol:ZCCHC11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001878 InterPro:IPR002934
Pfam:PF00098 Pfam:PF01909 PROSITE:PS50158 SMART:SM00343
Pfam:PF03828 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:4.10.60.10 SUPFAM:SSF57756 InterPro:IPR002058 GO:GO:0016779
GeneTree:ENSGT00550000074490 OMA:TDCRSNL EMBL:CU929620
Ensembl:ENSSSCT00000029203 Uniprot:I3L9X5
Length = 1168
Score = 209 (78.6 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 61/207 (29%), Positives = 109/207 (52%)
Query: 220 CKSSLGSERSQTLRHLETVGDLLQLFLPGCSQLFLPGCSQVKRILGARVPIIKYNHDMSA 279
C + G E ++ L E + +L ++ PG + I A+VPI+K+ H S
Sbjct: 777 CMTLEGHENAEKLNCKEIIENLAKILKRH------PGLRNILPITTAKVPIVKFEHRRSG 830
Query: 280 LECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDINLTNPTPGRWITNFSLT 339
LE D+S+ N A + +L + ID RV+ L +T+K +AK ++ + + G +++++
Sbjct: 831 LEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGS-LSSYAYI 889
Query: 340 LLVLFYLQSVK--VLPPLKLLIDEASLKDRRISEDGVNCTFVRDITKLQFH-PSIPEQST 396
L+VL++LQ K V+P L+ + D + R + DG N F +L+ PS+ + +T
Sbjct: 890 LMVLYFLQQRKPPVIPVLQEIFDGKQIPQRMV--DGWNAFFFDKTEELKKRLPSLGK-NT 946
Query: 397 DSLTTLLFGFFEFYSQ-YDFNNQGISL 422
++L L G FY++ +DF IS+
Sbjct: 947 ETLGELWLGLLRFYTEEFDFKEYVISI 973
Score = 52 (23.4 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 123 PPTEDHVRECLASCNTITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFP 182
PP+ H LA+ + ++ IT D + R+R + ++ ++ P C++
Sbjct: 59 PPSPAH----LAALSVAVIELAKEQGIT---DDDLRVRQEIVEEMSKVVTAFLPECSLRL 111
Query: 183 FGSSVNNF 190
+GSS+ F
Sbjct: 112 YGSSLTKF 119
>UNIPROTKB|F1S6H9 [details] [associations]
symbol:ZCCHC11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070102 "interleukin-6-mediated signaling pathway"
evidence=IEA] [GO:0050265 "RNA uridylyltransferase activity"
evidence=IEA] [GO:0032755 "positive regulation of interleukin-6
production" evidence=IEA] [GO:0032088 "negative regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=IEA]
[GO:0031054 "pre-miRNA processing" evidence=IEA] [GO:0019827 "stem
cell maintenance" evidence=IEA] [GO:0010587 "miRNA catabolic
process" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001816 "cytokine
production" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001878 InterPro:IPR002934 Pfam:PF00098 Pfam:PF01909
PROSITE:PS50158 SMART:SM00343 Pfam:PF03828 GO:GO:0005737
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
GO:GO:0031054 GO:GO:0032088 Gene3D:4.10.60.10 SUPFAM:SSF57756
GO:GO:0019827 GO:GO:0001816 InterPro:IPR002058 GO:GO:0050265
GeneTree:ENSGT00550000074490 GO:GO:0010587 GO:GO:0031123
GO:GO:0031664 InterPro:IPR025829 Pfam:PF13696 EMBL:CU929620
Ensembl:ENSSSCT00000004271 Uniprot:F1S6H9
Length = 1363
Score = 209 (78.6 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 61/207 (29%), Positives = 109/207 (52%)
Query: 220 CKSSLGSERSQTLRHLETVGDLLQLFLPGCSQLFLPGCSQVKRILGARVPIIKYNHDMSA 279
C + G E ++ L E + +L ++ PG + I A+VPI+K+ H S
Sbjct: 731 CMTLEGHENAEKLNCKEIIENLAKILKRH------PGLRNILPITTAKVPIVKFEHRRSG 784
Query: 280 LECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDINLTNPTPGRWITNFSLT 339
LE D+S+ N A + +L + ID RV+ L +T+K +AK ++ + + G +++++
Sbjct: 785 LEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGS-LSSYAYI 843
Query: 340 LLVLFYLQSVK--VLPPLKLLIDEASLKDRRISEDGVNCTFVRDITKLQFH-PSIPEQST 396
L+VL++LQ K V+P L+ + D + R + DG N F +L+ PS+ + +T
Sbjct: 844 LMVLYFLQQRKPPVIPVLQEIFDGKQIPQRMV--DGWNAFFFDKTEELKKRLPSLGK-NT 900
Query: 397 DSLTTLLFGFFEFYSQ-YDFNNQGISL 422
++L L G FY++ +DF IS+
Sbjct: 901 ETLGELWLGLLRFYTEEFDFKEYVISI 927
Score = 52 (23.4 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 123 PPTEDHVRECLASCNTITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFP 182
PP+ H LA+ + ++ IT D + R+R + ++ ++ P C++
Sbjct: 62 PPSPAH----LAALSVAVIELAKEQGIT---DDDLRVRQEIVEEMSKVVTAFLPECSLRL 114
Query: 183 FGSSVNNF 190
+GSS+ F
Sbjct: 115 YGSSLTKF 122
Score = 39 (18.8 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 20/85 (23%), Positives = 37/85 (43%)
Query: 110 DYAKINCDTHNVFPPTEDHVRECLASCNTITQQMTTLHNITK-MNDINTRLRFLVAYQ-- 166
D+ KI+ PP + RE L + + ++ L ++ ++ + R + L+ +
Sbjct: 647 DFRKIDLKP---LPPMTNRFREIL---DLVCKRCFDLDELSPPFSEQHNREQILIGLEKF 700
Query: 167 VELALSGLFPLCAIFPFGSSVNNFG 191
++ LC FGSS N FG
Sbjct: 701 IQKEYDEKARLCL---FGSSKNGFG 722
>UNIPROTKB|Q641A1 [details] [associations]
symbol:papd4-a "Poly(A) RNA polymerase GLD2-A" species:8355
"Xenopus laevis" [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=ISS] [GO:0043631 "RNA polyadenylation"
evidence=ISS] InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
GO:GO:0007275 GO:GO:0005524 GO:GO:0005737 GO:GO:0030154
GO:GO:0046872 GO:GO:0006397 GO:GO:0048477 GO:GO:0004652
InterPro:IPR002058 GO:GO:0043631 KO:K14079 EMBL:BC082438
RefSeq:NP_001087892.1 UniGene:Xl.1354 ProteinModelPortal:Q641A1
GeneID:447753 KEGG:xla:447753 CTD:447753 Xenbase:XB-GENE-1217415
HOVERGEN:HBG097533 Uniprot:Q641A1
Length = 509
Score = 189 (71.6 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 62/230 (26%), Positives = 120/230 (52%)
Query: 251 QLFLPGCSQVKRI--LGARVPIIKYNHDMSALECDLSMTNLTALYMAELLYLFGEIDWRV 308
+LF S ++R+ + A+VPI+K+ +S E DL++ N+ + LL + ++ RV
Sbjct: 267 KLFYTRLSYIERLQFIRAKVPIVKFRDKVSGAEFDLNVNNVVGIRNTFLLRTYAYLESRV 326
Query: 309 RPLVFTIKKWAKDINLTNPTPGRWITNFSLTLLVLFYLQSVK--VLPPLKLLIDEASLKD 366
RPLV IKKWA + + + G +++++L L+VL YLQ++ +LP L+ E D
Sbjct: 327 RPLVLVIKKWANHHGINDASRGT-LSSYTLVLMVLHYLQTLPEPILPSLQKKYPECF--D 383
Query: 367 RRISEDGVNCTFVRDITKLQFHPSIPEQSTDSLTTLLFGFFEFYS-QYDFNNQGISLYLG 425
+ + V+ R+I P + + T L LL GF ++++ ++D++ IS+ G
Sbjct: 384 LSMQLNLVHHA-PRNIP-----PYLSKNETP-LGDLLLGFLKYFAVEFDWSKDIISVREG 436
Query: 426 SPIPKPE-----HGALYINNPLERGLNVSKNV-SFEELERLKVEVRNASW 469
+P+ + + + + P + G N ++ V ++ + ++ E A W
Sbjct: 437 KALPRSDDYLWRNKYICVEEPFD-GTNTARAVYERQKFDMIRAEFLKA-W 484
Score = 59 (25.8 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 14/66 (21%), Positives = 32/66 (48%)
Query: 127 DHVRECLASC-NTITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFPFGS 185
DH+ L + ++QQ+ L + + + + + +++ + +FP ++ GS
Sbjct: 170 DHIDTTLPVAEDKLSQQILDLFQALQQQVCDIKKKDICRAELQREIQQIFPQSRLYLVGS 229
Query: 186 SVNNFG 191
S+N FG
Sbjct: 230 SLNGFG 235
>UNIPROTKB|E1C6A7 [details] [associations]
symbol:ZCCHC11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0001816 "cytokine
production" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0010587 "miRNA catabolic
process" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0031054 "pre-miRNA processing" evidence=IEA]
[GO:0031123 "RNA 3'-end processing" evidence=IEA] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=IEA] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0050265
"RNA uridylyltransferase activity" evidence=IEA] [GO:0070102
"interleukin-6-mediated signaling pathway" evidence=IEA]
InterPro:IPR001878 InterPro:IPR002934 Pfam:PF00098 Pfam:PF01909
PROSITE:PS50158 SMART:SM00343 Pfam:PF03828 GO:GO:0005737
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
GO:GO:0031054 GO:GO:0032088 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR002058 GO:GO:0050265 GeneTree:ENSGT00550000074490
GO:GO:0010587 GO:GO:0031123 GO:GO:0031664 OMA:TDCRSNL
EMBL:AADN02012569 IPI:IPI00602900 Ensembl:ENSGALT00000017295
Uniprot:E1C6A7
Length = 1575
Score = 215 (80.7 bits), Expect = 5.7e-13, Sum P(2) = 5.7e-13
Identities = 56/172 (32%), Positives = 98/172 (56%)
Query: 255 PGCSQVKRILGARVPIIKYNHDMSALECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFT 314
PG + I A+VPI+K+ H S LE D+S+ N A + +L + ID RV+ L +T
Sbjct: 1006 PGLRNILPITTAKVPIVKFEHRRSGLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYT 1065
Query: 315 IKKWAKDINLTNPTPGRWITNFSLTLLVLFYLQ--SVKVLPPLKLLIDEASLKDRRISED 372
+K +AK ++ + + G +++++ L+VL++LQ + V+P L+ + D + R + D
Sbjct: 1066 MKVFAKRCDIGDASRGS-LSSYAYILMVLYFLQQRNPPVIPVLQEIFDGKQIPQRMV--D 1122
Query: 373 GVNCTFVRDITKLQFH-PSIPEQSTDSLTTLLFGFFEFYSQ-YDFNNQGISL 422
G N F D+ +L+ PS+ + +T+SL L G FY++ +DF IS+
Sbjct: 1123 GWNAFFFDDMEELKKRLPSLGK-NTESLGELWLGLLRFYTEEFDFKEYVISI 1173
Score = 44 (20.5 bits), Expect = 5.7e-13, Sum P(2) = 5.7e-13
Identities = 40/173 (23%), Positives = 69/173 (39%)
Query: 29 SIEYRRLEAQRSILFGTVQSMHHYT-LPGQTHF--VIVEMKDSQVTRRILNKCGH--LDK 83
S E+ E+++S++ T S + T P +H +VE D + R+ + H DK
Sbjct: 809 SNEFSDAESRQSLV--TESSQNKCTGTPATSHNCKAMVEAHDLKDEGRLSTEEMHYVFDK 866
Query: 84 SQVIPVRSPFLWFRANKNK--TKLSDESDYAKINCDTHNVFPPTEDHVRECL-ASCNTIT 140
+ + P + K +K D+ KI+ PP D RE L C
Sbjct: 867 FILTSGKPPTIVCSICKRDGHSKNDCPEDFKKIDLKP---LPPMTDRFREILDIVCKRCF 923
Query: 141 QQMTTLHNITKMNDINTRLRFLVAYQ--VELALSGLFPLCAIFPFGSSVNNFG 191
+++ +++ R + L + + + + LC FGSS N FG
Sbjct: 924 DELSP-----PLSEQQNREQILASLERFIRKEYNDKARLCL---FGSSKNGFG 968
Score = 42 (19.8 bits), Expect = 9.2e-13, Sum P(2) = 9.2e-13
Identities = 9/39 (23%), Positives = 21/39 (53%)
Query: 152 MNDINTRLRFLVAYQVELALSGLFPLCAIFPFGSSVNNF 190
++D + R+R + ++E + P C++ +GS + F
Sbjct: 316 ISDDDFRIRQEIVNEMEKIIQQPLPDCSLRMYGSCLTRF 354
Score = 37 (18.1 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 11/32 (34%), Positives = 12/32 (37%)
Query: 48 SMHH-YTLPGQTHFVIVEMKDSQVTRRILNKC 78
S H Y F E + S VT NKC
Sbjct: 799 SEHQSYDTNSSNEFSDAESRQSLVTESSQNKC 830
>UNIPROTKB|Q2KEW4 [details] [associations]
symbol:MGCH7_ch7g922 "Putative uncharacterized protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
EMBL:CM000230 InterPro:IPR002058 GO:GO:0016779
ProteinModelPortal:Q2KEW4 Uniprot:Q2KEW4
Length = 1474
Score = 221 (82.9 bits), Expect = 5.7e-13, Sum P(2) = 5.7e-13
Identities = 60/201 (29%), Positives = 105/201 (52%)
Query: 256 GCSQVKRILGARVPIIKYNHDMSALECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTI 315
G +V + A+VPI+K L CD+++ N AL ++ + EID RVR L +
Sbjct: 513 GMEKVVCVSSAKVPIVKIWDPELGLACDMNVNNTLALENTRMVLTYVEIDERVRTLAMIV 572
Query: 316 KKWAKDINLTNPTPGRWITNFSLTLLVLFYLQSVKVLPPLKLLIDEASLKDRRISEDGVN 375
K W + + + G +++++ +++ +LQ PP+ + + K ++ S+DG
Sbjct: 573 KHWTRRRTINDAAFGGTLSSYTWICMIIAFLQLRD--PPILPALHQNPHK-KQTSKDGQP 629
Query: 376 CTFVRDITKLQFHPSIPEQSTDSLTTLLFGFFEFYS-QYDFNNQGISLYLGSPIPKPEHG 434
F D+TKL+ + ++ ++L LLF FF FY+ ++D++ IS+ LG I K E G
Sbjct: 630 SEFADDLTKLRGYGG---KNKETLGELLFHFFRFYAHEFDYDKSVISVRLGKLISKDEKG 686
Query: 435 ALY-INNPL--ERGLNVSKNV 452
Y +NN L E N +N+
Sbjct: 687 WTYTLNNMLCVEEPFNTIRNL 707
Score = 37 (18.1 bits), Expect = 5.7e-13, Sum P(2) = 5.7e-13
Identities = 19/78 (24%), Positives = 35/78 (44%)
Query: 466 NASWTLESTANSNNKPSHTPSESWGLLELFKKQNLSEKAKSVFFSEKSRPKERMVSVEDL 525
+A+ ++ S S + P++ S+G + LS + S S + P +R + V
Sbjct: 1195 SATESITSETPSFDTPNYVSQTSFGSNGYMSDKVLSNNSASSQAS--AAPSDRPLVVNGS 1252
Query: 526 FSTETSEDSQVPVEPDFK 543
ST +S + + PD K
Sbjct: 1253 -STPSSSVAPPVLVPDSK 1269
>POMBASE|SPBC1685.06 [details] [associations]
symbol:cid11 "poly(A) polymerase Cid11 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR002934
Pfam:PF01909 PomBase:SPBC1685.06 Pfam:PF03828 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 EMBL:CU329671
GO:GO:0006397 GenomeReviews:CU329671_GR GO:GO:0003723 PIR:T39522
RefSeq:NP_595210.1 ProteinModelPortal:O74326
EnsemblFungi:SPBC1685.06.1 GeneID:2539762 KEGG:spo:SPBC1685.06
eggNOG:COG5260 OMA:ENNACER OrthoDB:EOG46QB1M NextBio:20800912
GO:GO:0004652 InterPro:IPR002058 Uniprot:O74326
Length = 478
Score = 198 (74.8 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 65/208 (31%), Positives = 106/208 (50%)
Query: 252 LFLPGCSQVKRILGARVPIIKYNHDMSALECDLSMTNLTALYMAELLYLFGEIDWRVRPL 311
L+ G Q+ + ARVPI+K + CDL++ N A ++L LF ID RVRPL
Sbjct: 129 LYSYGMKQIVCVSRARVPIVKIWDPQFDIHCDLNINNDVAKINTKMLRLFVSIDPRVRPL 188
Query: 312 VFTIKKWAKDINLTNPTPGRWITNFSLTLLVLFYLQSVKVLPP-LKLLIDEASLKDRRIS 370
IK WAK L + IT+++++ +++ +LQ+ PP L ++D S D ++
Sbjct: 189 GLIIKYWAKQRALCDAAGSGTITSYTISCMLVNFLQTRN--PPILPAMLDLMSNDDNKM- 245
Query: 371 EDGVNCTFVRDITKLQFHPSIPEQSTDSLTTLLFGFFEFYSQYDFN--NQGISLYLGSPI 428
FV DI + ++ + SL LL FF +Y + FN + +S+ G+ +
Sbjct: 246 -------FVDDIVGFKEKATL---NKTSLGRLLIDFFYYYG-FSFNYLDSVVSVRSGTVL 294
Query: 429 PKPEHG-ALYINNPL--ERGLNVSKNVS 453
K E G A+ +NN L E N ++N++
Sbjct: 295 NKQEKGWAMEVNNSLCVEEPFNTARNLA 322
Score = 46 (21.3 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 448 VSKNVSFEELERLKVEVRNASWTLESTANSNNKPSHTPSESWG 490
+S+N + E L ++ E + T E+ + N P +T ES+G
Sbjct: 344 MSENNACERLCKICEEYQFLDITNEANYGNTNTPFNTAYESFG 386
>MGI|MGI:2445126 [details] [associations]
symbol:Zcchc11 "zinc finger, CCHC domain containing 11"
species:10090 "Mus musculus" [GO:0001816 "cytokine production"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0010586 "miRNA metabolic
process" evidence=IMP] [GO:0010587 "miRNA catabolic process"
evidence=ISO] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0019827 "stem cell maintenance" evidence=ISO] [GO:0031047 "gene
silencing by RNA" evidence=IEA] [GO:0031054 "pre-miRNA processing"
evidence=ISO] [GO:0031123 "RNA 3'-end processing" evidence=ISO;IDA]
[GO:0031664 "regulation of lipopolysaccharide-mediated signaling
pathway" evidence=IDA] [GO:0032088 "negative regulation of
NF-kappaB transcription factor activity" evidence=IDA] [GO:0032755
"positive regulation of interleukin-6 production" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0050265 "RNA
uridylyltransferase activity" evidence=ISO;IDA] [GO:0070102
"interleukin-6-mediated signaling pathway" evidence=IMP]
InterPro:IPR001878 InterPro:IPR002934 Pfam:PF00098 Pfam:PF01909
PROSITE:PS50158 SMART:SM00343 MGI:MGI:2445126 Pfam:PF03828
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
GO:GO:0032755 GO:GO:0003676 GO:GO:0031054 GO:GO:0032088
Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0019827 GO:GO:0001816
EMBL:AL626783 eggNOG:COG5260 InterPro:IPR002058 GO:GO:0050265
GO:GO:0070102 EMBL:AL627238 GeneTree:ENSGT00550000074490
GO:GO:0010587 GO:GO:0031123 GO:GO:0031664 CTD:23318 KO:K13291
ChiTaRS:ZCCHC11 EMBL:BC150791 EMBL:AK220327 EMBL:AK134388
IPI:IPI00648042 RefSeq:NP_780681.2 UniGene:Mm.25181
UniGene:Mm.446602 ProteinModelPortal:B2RX14 SMR:B2RX14
DIP:DIP-48571N STRING:B2RX14 PhosphoSite:B2RX14 PaxDb:B2RX14
PRIDE:B2RX14 Ensembl:ENSMUST00000043368 Ensembl:ENSMUST00000155068
GeneID:230594 KEGG:mmu:230594 UCSC:uc008ubd.1 HOGENOM:HOG000231134
InParanoid:A2A8R8 NextBio:379961 Bgee:B2RX14 Genevestigator:B2RX14
Uniprot:B2RX14
Length = 1644
Score = 212 (79.7 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 62/207 (29%), Positives = 109/207 (52%)
Query: 220 CKSSLGSERSQTLRHLETVGDLLQLFLPGCSQLFLPGCSQVKRILGARVPIIKYNHDMSA 279
C + G E ++ L E + +L ++ PG + I A+VPI+K+ H S
Sbjct: 1030 CMTLEGHENAEKLNCKEIIENLAKILKRH------PGLRNILPITTAKVPIVKFEHRRSG 1083
Query: 280 LECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDINLTNPTPGRWITNFSLT 339
LE D+S+ N A + +L + ID RV+ L +T+K +AK ++ + + G +++++
Sbjct: 1084 LEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGS-LSSYAYI 1142
Query: 340 LLVLFYLQSVK--VLPPLKLLIDEASLKDRRISEDGVNCTFVRDITKLQFH-PSIPEQST 396
L+VL++LQ K V+P L+ + D + R + DG N F +L+ PS+ + +T
Sbjct: 1143 LMVLYFLQQRKPPVIPVLQEIFDGKQIPQRMV--DGWNAFFFDKTEELKKRLPSLGK-NT 1199
Query: 397 DSLTTLLFGFFEFYSQ-YDFNNQGISL 422
+SL L G FY++ +DF IS+
Sbjct: 1200 ESLGELWLGLLRFYTEEFDFKEYVISI 1226
Score = 45 (20.9 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 13/58 (22%), Positives = 27/58 (46%)
Query: 133 LASCNTITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFPFGSSVNNF 190
LA+ + ++ IT D + R+R + ++ + P C++ +GSS+ F
Sbjct: 372 LAALSVAVVELAKEQGIT---DDDLRIRQDIVEEMSKVIMTFLPECSLRLYGSSLTKF 426
>RGD|1586015 [details] [associations]
symbol:Zcchc6 "zinc finger, CCHC domain containing 6"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0031123 "RNA
3'-end processing" evidence=IEA;ISO] [GO:0050265 "RNA
uridylyltransferase activity" evidence=IEA;ISO] [GO:0071044
"histone mRNA catabolic process" evidence=ISO] InterPro:IPR001878
InterPro:IPR002934 InterPro:IPR015880 Pfam:PF00098 Pfam:PF01909
PROSITE:PS50158 SMART:SM00343 SMART:SM00355 Pfam:PF03828
RGD:1586015 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
Gene3D:4.10.60.10 SUPFAM:SSF57756 InterPro:IPR002058 GO:GO:0050265
GO:GO:0031123 OrthoDB:EOG40VVNP IPI:IPI00211280
Ensembl:ENSRNOT00000067726 UCSC:RGD:1586015 ArrayExpress:D3ZL68
Uniprot:D3ZL68
Length = 1485
Score = 209 (78.6 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 69/244 (28%), Positives = 126/244 (51%)
Query: 220 CKSSLGSERSQTLRHLETVGDLLQLFLPGCSQLFLPGCSQVKRILGARVPIIKYNHDMSA 279
C + G E ++ L + T+ +L ++ G + I A+VPI+K++H S
Sbjct: 1055 CMTINGHETAEGLDCVRTIEELARVLRKHS------GLRNILPITTAKVPIVKFSHLRSG 1108
Query: 280 LECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDINLTNPTPGRWITNFSLT 339
LE D+S+ N AL+ LL+ + ID RV+ L +T+K + K ++ + + G +++++ T
Sbjct: 1109 LEVDISLYNTLALHNTRLLFAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGS-LSSYAYT 1167
Query: 340 LLVLFYLQSVKVLPPLKLLIDEASLKDRR--ISEDGVNCTFVRDITKLQFHPSI-PE--Q 394
L+VL++LQ PP+ ++ E +++ I DG N F I +L P+ PE +
Sbjct: 1168 LMVLYFLQQRS--PPVIPVLQEIYKGEKKPEILVDGWNIYFFDQINEL---PTCWPEYGK 1222
Query: 395 STDSLTTLLFGFFEFYSQ-YDFNNQGISLYLGSPIP--KPEHGALYI--NNPLERGLNVS 449
+T+S+ L G FY++ +DF IS+ S + K + + YI +P + N+
Sbjct: 1223 NTESVGQLWLGLLRFYTEEFDFKEHVISIRRKSLLTTFKKQWTSKYIVIEDPFDLNHNLG 1282
Query: 450 KNVS 453
+S
Sbjct: 1283 AGLS 1286
Score = 121 (47.7 bits), Expect = 0.00095, Sum P(3) = 0.00095
Identities = 34/102 (33%), Positives = 52/102 (50%)
Query: 266 ARVPIIKYNHDMSALECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDINLT 325
ARVP++ H S L C +S N A + L G+++ R+ PLV + WAK ++
Sbjct: 391 ARVPVVVCRHKQSGLLCKVSAGNENAWLTTKHLTALGKLEPRLLPLVIAFRYWAKLCSID 450
Query: 326 NPTPGRWITNFSLTLLVLFYLQSVK--VLPP-LKLLIDEASL 364
P G + + L+ +F+LQ K +LP L I+E SL
Sbjct: 451 RPEEGG-LPPYVFALMAVFFLQQRKEPLLPVYLGSWIEEFSL 491
Score = 50 (22.7 bits), Expect = 0.00095, Sum P(3) = 0.00095
Identities = 20/78 (25%), Positives = 40/78 (51%)
Query: 474 TANSNNKPSHTPSESW-GLLELFKKQ-NLSEKAKSV----FFSEKSR--PKERMVSVEDL 525
T N ++PS + W LL + + NL++ S+ S +S+ PK+R +++ED
Sbjct: 540 TFNIKHQPSVPVGQLWVELLRFYALEFNLADLVISIRVKELISRESKDWPKKR-IAIEDP 598
Query: 526 FSTETSEDSQVPVEPDFK 543
+S + + + +P F+
Sbjct: 599 YSVKRNVARTLNNQPVFE 616
Score = 46 (21.3 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 16/69 (23%), Positives = 30/69 (43%)
Query: 123 PPTEDHVRECLASCNTITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFP 182
PP + ++ + + Q+ LHN +++ RL A +E P C++
Sbjct: 286 PPAPSQIHAVGSAIDRVVQEFG-LHN----ENLDQRLEIKCA--MENVFQHKLPDCSLRL 338
Query: 183 FGSSVNNFG 191
+GSS + G
Sbjct: 339 YGSSCSRLG 347
Score = 40 (19.1 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 175 FPLCAIFPFGSSVNNFG 191
FP + FGSS N FG
Sbjct: 1030 FPGTKLSLFGSSKNGFG 1046
>UNIPROTKB|F1MCY7 [details] [associations]
symbol:ZCCHC11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070102 "interleukin-6-mediated signaling pathway"
evidence=IEA] [GO:0050265 "RNA uridylyltransferase activity"
evidence=IEA] [GO:0032755 "positive regulation of interleukin-6
production" evidence=IEA] [GO:0032088 "negative regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=IEA]
[GO:0031054 "pre-miRNA processing" evidence=IEA] [GO:0019827 "stem
cell maintenance" evidence=IEA] [GO:0010587 "miRNA catabolic
process" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001816 "cytokine
production" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001878 InterPro:IPR002934 Pfam:PF00098 Pfam:PF01909
PROSITE:PS50158 SMART:SM00343 Pfam:PF03828 GO:GO:0005737
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
GO:GO:0031054 GO:GO:0032088 Gene3D:4.10.60.10 SUPFAM:SSF57756
GO:GO:0019827 GO:GO:0001816 InterPro:IPR002058 GO:GO:0050265
GeneTree:ENSGT00550000074490 GO:GO:0010587 GO:GO:0031123
GO:GO:0031664 EMBL:DAAA02008880 EMBL:DAAA02008879 IPI:IPI01003734
Ensembl:ENSBTAT00000003525 OMA:TDCRSNL Uniprot:F1MCY7
Length = 1667
Score = 209 (78.6 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 61/207 (29%), Positives = 109/207 (52%)
Query: 220 CKSSLGSERSQTLRHLETVGDLLQLFLPGCSQLFLPGCSQVKRILGARVPIIKYNHDMSA 279
C + G E ++ L E + +L ++ PG + I A+VPI+K+ H S
Sbjct: 1035 CMTLEGHENAEKLNCKEIIENLAKILKRH------PGLRNILPITTAKVPIVKFEHRRSG 1088
Query: 280 LECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDINLTNPTPGRWITNFSLT 339
LE D+S+ N A + +L + ID RV+ L +T+K +AK ++ + + G +++++
Sbjct: 1089 LEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGS-LSSYAYI 1147
Query: 340 LLVLFYLQSVK--VLPPLKLLIDEASLKDRRISEDGVNCTFVRDITKLQFH-PSIPEQST 396
L+VL++LQ K V+P L+ + D + R + DG N F +L+ PS+ + +T
Sbjct: 1148 LMVLYFLQQRKPPVIPVLQEIFDGKQIPQRMV--DGWNAFFFDKTEELKKRLPSLGK-NT 1204
Query: 397 DSLTTLLFGFFEFYSQ-YDFNNQGISL 422
++L L G FY++ +DF IS+
Sbjct: 1205 ETLGELWLGLLRFYTEEFDFKEYVISI 1231
Score = 45 (20.9 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 15/68 (22%), Positives = 32/68 (47%)
Query: 123 PPTEDHVRECLASCNTITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFP 182
PP+ H LA+ + ++ IT D + ++R + ++ ++ P C++
Sbjct: 367 PPSLAH----LAALSVAVIELAKEQGIT---DDDLKVRQEIVEEMSKVVTTFLPECSLRL 419
Query: 183 FGSSVNNF 190
+GSS+ F
Sbjct: 420 YGSSLTKF 427
Score = 37 (18.1 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 7/31 (22%), Positives = 14/31 (45%)
Query: 108 ESDYAKINCDTHNVFPPTEDHVRECLASCNT 138
+ D+++ NC + P E +C + T
Sbjct: 850 KKDFSQYNCIDYKSPEPDESSGTDCRSDLET 880
>POMBASE|SPAC19D5.03 [details] [associations]
symbol:cid1 "poly(A) polymerase Cid1" species:4896
"Schizosaccharomyces pombe" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0033314 "mitotic DNA
replication checkpoint" evidence=IMP] [GO:0043631 "RNA
polyadenylation" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050265 "RNA uridylyltransferase activity"
evidence=IDA] [GO:0071076 "RNA 3' uridylation" evidence=IDA]
InterPro:IPR002934 Pfam:PF01909 PomBase:SPAC19D5.03 Pfam:PF03828
GO:GO:0005829 EMBL:CU329670 GO:GO:0051301 GO:GO:0007067
GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0033314
eggNOG:COG5260 InterPro:IPR002058 GO:GO:0043631 EMBL:AF105076
PIR:T37963 RefSeq:NP_594901.1 PDB:4E7X PDB:4E80 PDB:4E8F PDB:4EP7
PDB:4FH3 PDB:4FH5 PDB:4FHP PDB:4FHV PDB:4FHW PDB:4FHX PDB:4FHY
PDBsum:4E7X PDBsum:4E80 PDBsum:4E8F PDBsum:4EP7 PDBsum:4FH3
PDBsum:4FH5 PDBsum:4FHP PDBsum:4FHV PDBsum:4FHW PDBsum:4FHX
PDBsum:4FHY ProteinModelPortal:O13833 STRING:O13833
EnsemblFungi:SPAC19D5.03.1 GeneID:2542420 KEGG:spo:SPAC19D5.03
OMA:DMARIRG OrthoDB:EOG4S7P0J NextBio:20803478 GO:GO:0050265
GO:GO:0071076 Uniprot:O13833
Length = 405
Score = 193 (73.0 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 75/237 (31%), Positives = 114/237 (48%)
Query: 266 ARVPIIKYNHDM-----SALECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAK 320
AR+PIIK D ++ +CD+ N A++ LL + ++D R++P+V +K WAK
Sbjct: 138 ARIPIIKLTSDTKNGFGASFQCDIGFNNRLAIHNTLLLSSYTKLDARLKPMVLLVKHWAK 197
Query: 321 DINLTNPTPGRWITNFSLTLLVLFYLQSVKVLPPL--KLLIDEASLKDRRISEDGVNCTF 378
+ +P G ++++ L+VL+YL V + PP+ LL+ + LK +I DG + F
Sbjct: 198 RKQINSPYFGT-LSSYGYVLMVLYYLIHV-IKPPVFPNLLL--SPLKQEKIV-DGFDVGF 252
Query: 379 VRDITKLQFHPSIPEQSTDSLTTLLFGFFEFYSQYDFNNQGISLYLGSP---IPKPEHG- 434
D KL+ P P Q+ SL +LL GFF FY+ Y F + + P + K E G
Sbjct: 253 --D-DKLEDIP--PSQNYSSLGSLLHGFFRFYA-YKFEPREKVVTFRRPDGYLTKQEKGW 306
Query: 435 ------------------ALYINNPLERGLNVSKNVSFEELERLKVEVRNASWTLES 473
L I +P E NV + VS L R++ E AS L S
Sbjct: 307 TSATEHTGSADQIIKDRYILAIEDPFEISHNVGRTVSSSGLYRIRGEFMAASRLLNS 363
>UNIPROTKB|F1NYJ2 [details] [associations]
symbol:LOC100857368 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 Pfam:PF03828
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
InterPro:IPR002058 GeneTree:ENSGT00550000074490 EMBL:AADN02064833
EMBL:AADN02064834 IPI:IPI00572679 Ensembl:ENSGALT00000020583
ArrayExpress:F1NYJ2 Uniprot:F1NYJ2
Length = 1330
Score = 195 (73.7 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 64/209 (30%), Positives = 110/209 (52%)
Query: 220 CKSSLGSERSQTLRHLETVGDLLQLFLPGCSQLFLPGCSQVKRILGARVPIIKYNHDMSA 279
C + G E ++ L +T +L + F+ L V I A+VPI+K+ H S
Sbjct: 1025 CMTMDGLETAEILPCYKTASELGR-FI----NLMSKSLRNVLPITTAKVPIVKFFHVRSG 1079
Query: 280 LECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDINLTNPTPGRWITNFSLT 339
LE D+S+ N AL+ LL + ID RV+ L +T+K + K ++ + + G +++++ T
Sbjct: 1080 LEVDISLYNTLALHNTRLLSSYAAIDPRVKYLCYTMKVFTKMCDIGDASRGS-LSSYAYT 1138
Query: 340 LLVLFYLQ--SVKVLPPLKLLIDEASLKDRRISEDGVNCTFVRDITKLQFHPSI-PE--Q 394
L+VL++LQ + V+P L+ + E K I DG N F I +L P++ P+ +
Sbjct: 1139 LMVLYFLQQRNPPVIPVLQEIYKEP--KKPEILVDGWNVYFFDKIEEL---PAVWPDSGK 1193
Query: 395 STDSLTTLLFGFFEFYSQ-YDFNNQGISL 422
+T+S+ L G FY++ +DF I +
Sbjct: 1194 NTESVGQLWLGLLRFYTEEFDFKEHVICI 1222
Score = 54 (24.1 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 18/69 (26%), Positives = 31/69 (44%)
Query: 123 PPTEDHVRECLASCNTITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFP 182
PPT ++ + + Q+ L N D+ RL+ +E L P C++
Sbjct: 272 PPTPSQIKAIDVAIENVVQEFG-LSNA----DLQERLKIRTI--MEDLLHQKLPECSLRL 324
Query: 183 FGSSVNNFG 191
+GSS++ FG
Sbjct: 325 YGSSLSGFG 333
Score = 43 (20.2 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 153 NDINTRLRFLVAYQVELALSGLFPLCAIFPFGSSVNNFG 191
N++ + R + +E + FP + FGSS N FG
Sbjct: 978 NNVEDQAREHIRQNLENFIRLEFPGTKLNLFGSSKNGFG 1016
>UNIPROTKB|F1NJM6 [details] [associations]
symbol:LOC100857368 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0031123 "RNA
3'-end processing" evidence=IEA] [GO:0050265 "RNA
uridylyltransferase activity" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 Pfam:PF03828
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 InterPro:IPR002058 GO:GO:0050265
GeneTree:ENSGT00550000074490 GO:GO:0031123 OMA:KYFALPH
EMBL:AADN02064833 EMBL:AADN02064834 IPI:IPI00681958
Ensembl:ENSGALT00000033908 ArrayExpress:F1NJM6 Uniprot:F1NJM6
Length = 1477
Score = 195 (73.7 bits), Expect = 6.8e-12, Sum P(2) = 6.8e-12
Identities = 64/209 (30%), Positives = 110/209 (52%)
Query: 220 CKSSLGSERSQTLRHLETVGDLLQLFLPGCSQLFLPGCSQVKRILGARVPIIKYNHDMSA 279
C + G E ++ L +T +L + F+ L V I A+VPI+K+ H S
Sbjct: 1044 CMTMDGLETAEILPCYKTASELGR-FI----NLMSKSLRNVLPITTAKVPIVKFFHVRSG 1098
Query: 280 LECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDINLTNPTPGRWITNFSLT 339
LE D+S+ N AL+ LL + ID RV+ L +T+K + K ++ + + G +++++ T
Sbjct: 1099 LEVDISLYNTLALHNTRLLSSYAAIDPRVKYLCYTMKVFTKMCDIGDASRGS-LSSYAYT 1157
Query: 340 LLVLFYLQ--SVKVLPPLKLLIDEASLKDRRISEDGVNCTFVRDITKLQFHPSI-PE--Q 394
L+VL++LQ + V+P L+ + E K I DG N F I +L P++ P+ +
Sbjct: 1158 LMVLYFLQQRNPPVIPVLQEIYKEP--KKPEILVDGWNVYFFDKIEEL---PAVWPDSGK 1212
Query: 395 STDSLTTLLFGFFEFYSQ-YDFNNQGISL 422
+T+S+ L G FY++ +DF I +
Sbjct: 1213 NTESVGQLWLGLLRFYTEEFDFKEHVICI 1241
Score = 54 (24.1 bits), Expect = 6.8e-12, Sum P(2) = 6.8e-12
Identities = 18/69 (26%), Positives = 31/69 (44%)
Query: 123 PPTEDHVRECLASCNTITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFP 182
PPT ++ + + Q+ L N D+ RL+ +E L P C++
Sbjct: 272 PPTPSQIKAIDVAIENVVQEFG-LSNA----DLQERLKIRTI--MEDLLHQKLPECSLRL 324
Query: 183 FGSSVNNFG 191
+GSS++ FG
Sbjct: 325 YGSSLSGFG 333
Score = 43 (20.2 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 153 NDINTRLRFLVAYQVELALSGLFPLCAIFPFGSSVNNFG 191
N++ + R + +E + FP + FGSS N FG
Sbjct: 997 NNVEDQAREHIRQNLENFIRLEFPGTKLNLFGSSKNGFG 1035
>UNIPROTKB|Q5VYS8 [details] [associations]
symbol:ZCCHC6 "Terminal uridylyltransferase 7" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0050265 "RNA
uridylyltransferase activity" evidence=IDA] [GO:0071044 "histone
mRNA catabolic process" evidence=IMP] [GO:0031123 "RNA 3'-end
processing" evidence=IDA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS00028 PROSITE:PS50158 SMART:SM00343 Pfam:PF03828
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 eggNOG:COG5260 InterPro:IPR002058 GO:GO:0050265
EMBL:AL137849 GO:GO:0031123 KO:K13291 EMBL:AL832026 EMBL:AL832193
EMBL:BX641077 EMBL:CR933643 EMBL:CR933644 EMBL:CR936608
EMBL:AL353678 EMBL:BC032456 EMBL:AK023471 EMBL:AK055546
EMBL:AK055948 EMBL:AB051498 IPI:IPI00336000 IPI:IPI00374531
IPI:IPI00552923 IPI:IPI00604491 IPI:IPI00604635 IPI:IPI00604680
RefSeq:NP_001171988.1 RefSeq:NP_001172003.1 RefSeq:NP_078893.2
UniGene:Hs.597057 ProteinModelPortal:Q5VYS8 SMR:Q5VYS8
IntAct:Q5VYS8 PhosphoSite:Q5VYS8 DMDM:67462100 PaxDb:Q5VYS8
PRIDE:Q5VYS8 DNASU:79670 Ensembl:ENST00000277141
Ensembl:ENST00000375957 Ensembl:ENST00000375960
Ensembl:ENST00000375961 Ensembl:ENST00000375963 GeneID:79670
KEGG:hsa:79670 UCSC:uc004aoq.3 UCSC:uc004aot.3 UCSC:uc004aov.3
UCSC:uc004aow.3 CTD:79670 GeneCards:GC09M088902 H-InvDB:HIX0008144
HGNC:HGNC:25817 HPA:HPA020615 HPA:HPA020620 neXtProt:NX_Q5VYS8
PharmGKB:PA134971144 InParanoid:Q5VYS8 OMA:KYFALPH ChiTaRS:ZCCHC6
GenomeRNAi:79670 NextBio:68893 ArrayExpress:Q5VYS8 Bgee:Q5VYS8
CleanEx:HS_ZCCHC6 Genevestigator:Q5VYS8 GermOnline:ENSG00000083223
Uniprot:Q5VYS8
Length = 1495
Score = 203 (76.5 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 67/241 (27%), Positives = 122/241 (50%)
Query: 220 CKSSLGSERSQTLRHLETVGDLLQLFLPGCSQLFLPGCSQVKRILGARVPIIKYNHDMSA 279
C + G E ++ L + T+ +L ++ G + I A+VPI+K+ H S
Sbjct: 1062 CMTINGLETAEGLDCVRTIEELARVLRKHS------GLRNILPITTAKVPIVKFFHLRSG 1115
Query: 280 LECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDINLTNPTPGRWITNFSLT 339
LE D+S+ N AL+ LL + ID RV+ L +T+K + K ++ + + G +++++ T
Sbjct: 1116 LEVDISLYNTLALHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGS-LSSYAYT 1174
Query: 340 LLVLFYLQSVKVLPPLKLLIDEASLKDRR--ISEDGVNCTFVRDITKLQFHPSIPEQSTD 397
L+VL++LQ PP+ ++ E +++ I DG N F I +L + S ++T+
Sbjct: 1175 LMVLYFLQQRN--PPVIPVLQEIYKGEKKPEIFVDGWNIYFFDQIDELPTYWSECGKNTE 1232
Query: 398 SLTTLLFGFFEFYSQ-YDFNNQGISLYLGSPIP--KPEHGALYI--NNPLERGLNVSKNV 452
S+ L G FY++ +DF IS+ S + K + + YI +P + N+ +
Sbjct: 1233 SVGQLWLGLLRFYTEEFDFKEHVISIRRKSLLTTFKKQWTSKYIVIEDPFDLNHNLGAGL 1292
Query: 453 S 453
S
Sbjct: 1293 S 1293
Score = 44 (20.5 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 16/69 (23%), Positives = 29/69 (42%)
Query: 123 PPTEDHVRECLASCNTITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFP 182
PPT + + + + Q+ LHN ++ RL + +E P C++
Sbjct: 286 PPTPSQINAVGIAIDKVVQEFG-LHN----ENLEQRLE--IKRIMENVFQHKLPDCSLRL 338
Query: 183 FGSSVNNFG 191
+GSS + G
Sbjct: 339 YGSSCSRLG 347
Score = 40 (19.1 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 175 FPLCAIFPFGSSVNNFG 191
FP + FGSS N FG
Sbjct: 1037 FPGTKLSLFGSSKNGFG 1053
>UNIPROTKB|E1BAR2 [details] [associations]
symbol:ZCCHC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050265 "RNA uridylyltransferase activity"
evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 Pfam:PF03828 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR002058 GO:GO:0050265 GeneTree:ENSGT00550000074490
GO:GO:0031123 KO:K13291 CTD:79670 OMA:KYFALPH EMBL:DAAA02023954
IPI:IPI00721027 RefSeq:NP_001192681.1 UniGene:Bt.42314
Ensembl:ENSBTAT00000002277 GeneID:513209 KEGG:bta:513209
NextBio:20870748 Uniprot:E1BAR2
Length = 1498
Score = 201 (75.8 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 69/242 (28%), Positives = 124/242 (51%)
Query: 220 CKSSLGSERSQTLRHLETVGDLLQLFLPGCSQLFLPGCSQVKRILGARVPIIKYNHDMSA 279
C + G E ++ L + T+ +L ++ L S G + I A+VPI+K+ H S
Sbjct: 1065 CMTINGLETAEELDCVRTIEELARV-LKKHS-----GLRNILPITTAKVPIVKFFHLRSG 1118
Query: 280 LECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDINLTNPTPGRWITNFSLT 339
LE D+S+ N AL+ LL + ID RV+ L +T+K + K ++ + + G +++++ T
Sbjct: 1119 LEVDISLYNTLALHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGS-LSSYAYT 1177
Query: 340 LLVLFYLQSVKVLPPLKLLIDEASLKDRR--ISEDGVNCTFVRDITKL-QFHPSIPEQST 396
L+VL++LQ PP+ ++ E +++ I DG N F I +L + P + +T
Sbjct: 1178 LMVLYFLQQRN--PPVIPVLQEIYKGEKKPEIFVDGWNIYFFDQIDELPNYWPEYGK-NT 1234
Query: 397 DSLTTLLFGFFEFYSQ-YDFNNQGISLYLGSPIP--KPEHGALYI--NNPLERGLNVSKN 451
+S+ L G FY++ +DF IS+ S + K + + YI +P + N+
Sbjct: 1235 ESVGQLWLGLLRFYTEEFDFKEHVISIRRKSLLTTFKKQWTSKYIVIEDPFDLNHNLGAG 1294
Query: 452 VS 453
+S
Sbjct: 1295 LS 1296
Score = 44 (20.5 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 16/69 (23%), Positives = 29/69 (42%)
Query: 123 PPTEDHVRECLASCNTITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFP 182
PPT + + + + Q+ LHN ++ RL + +E P C++
Sbjct: 286 PPTPSQINAIGIAIDKVVQEFG-LHN----ENLEQRLE--IKRIMENVFQHKLPDCSLRL 338
Query: 183 FGSSVNNFG 191
+GSS + G
Sbjct: 339 YGSSCSRLG 347
Score = 40 (19.1 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 175 FPLCAIFPFGSSVNNFG 191
FP + FGSS N FG
Sbjct: 1040 FPGTKLSLFGSSKNGFG 1056
>TAIR|locus:2043669 [details] [associations]
symbol:AT2G45620 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA;ISS] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0048573 "photoperiodism, flowering" evidence=RCA]
InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828 EMBL:CP002685
GenomeReviews:CT485783_GR EMBL:AC003680 eggNOG:COG5260
InterPro:IPR002058 GO:GO:0016779 EMBL:AF360181 EMBL:AY039997
IPI:IPI00541796 PIR:T00875 RefSeq:NP_566048.1 UniGene:At.19458
UniGene:At.74976 ProteinModelPortal:O64642 SMR:O64642 STRING:O64642
PaxDb:O64642 PRIDE:O64642 EnsemblPlants:AT2G45620.1 GeneID:819170
KEGG:ath:AT2G45620 TAIR:At2g45620 HOGENOM:HOG000114999
InParanoid:O64642 OMA:DINKSEM PhylomeDB:O64642
ProtClustDB:CLSN2688946 ArrayExpress:O64642 Genevestigator:O64642
Uniprot:O64642
Length = 764
Score = 197 (74.4 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 53/217 (24%), Positives = 107/217 (49%)
Query: 220 CKSSLGSERSQTLRHLETVGDLL---QLFLPGCSQLFLPGCSQVKRILGARVPIIKYNHD 276
C +S G +S L GD + ++ L L V+ + ARVPI+K
Sbjct: 481 CANSFGFPKSDIDVCLAIEGDDINKSEMLLKLAEILESDNLQNVQALTRARVPIVKLMDP 540
Query: 277 MSALECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDINLTNPTPGRWITNF 336
++ + CD+ + N+ A+ +LL + +ID R+R L F +K WAK + G ++++
Sbjct: 541 VTGISCDICINNVLAVVNTKLLRDYAQIDVRLRQLAFIVKHWAKSRRVNETYQGT-LSSY 599
Query: 337 SLTLLVLFYLQSVKVLPPLKLLIDEASLKDRRISEDGVNCTFVRDITKLQFHPSIPEQST 396
+ L+ + +LQ + PP+ + E + D + CT+ ++ +L+ + +
Sbjct: 600 AYVLMCIHFLQQRR--PPILPCLQEME-PTYSVRVDNIRCTYFDNVDRLR---NFGSNNR 653
Query: 397 DSLTTLLFGFFEFYSQ-YDFNNQGISLYLGSPIPKPE 432
+++ L++GFF +++ +D+ +S+ GS + K E
Sbjct: 654 ETIAELVWGFFNYWAYAHDYAYNVVSVRTGSILGKRE 690
Score = 40 (19.1 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 160 RFLVAYQVELALSGLFPLCAIFPFGSSVNNFG 191
R L+A+ +E ++ +P ++ +GS N+FG
Sbjct: 456 RQLMAH-LENLVAKEWPHAKLYLYGSCANSFG 486
Score = 40 (19.1 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 14/56 (25%), Positives = 23/56 (41%)
Query: 123 PPTEDHVRECL--ASCNTITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFP 176
PP + R+ + + TQ + LHN D N + + Q L+ S + P
Sbjct: 146 PPPQSETRKLVFGSFSGDATQSLNGLHNGNLKYDSNQHEQLMRHPQSTLSNSNMDP 201
>POMBASE|SPAC17H9.01 [details] [associations]
symbol:cid16 "poly(A) polymerase Cid16 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=NAS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002934 Pfam:PF01909
PomBase:SPAC17H9.01 Pfam:PF03828 GO:GO:0005737 EMBL:CU329670
GO:GO:0051301 GO:GO:0007067 GenomeReviews:CU329670_GR
eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058 PIR:T37867
RefSeq:NP_593571.1 ProteinModelPortal:O13798
EnsemblFungi:SPAC17H9.01.1 GeneID:2542188 KEGG:spo:SPAC17H9.01
OrthoDB:EOG40W00S NextBio:20803258 Uniprot:O13798
Length = 1202
Score = 201 (75.8 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 56/174 (32%), Positives = 96/174 (55%)
Query: 258 SQVKRILGARVPIIKYNHDMSALECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKK 317
S V I GAR+PIIK+ + + CDLS NL ++ ++L+ + ID RV+ L+ +K
Sbjct: 968 SNVMPIRGARIPIIKFTGQYN-IHCDLSFDNLLPIHNSDLILNYSLIDERVKTLLMLVKY 1026
Query: 318 WAKDINLTNPTPGRWITNFSLTLLVLFYLQSVK--VLPPLKLLIDEASLKDRRISEDGVN 375
WA + L + T + ++++ ++V+FYLQ + +LP L+ L + S R VN
Sbjct: 1027 WASN-RLIDKTHHAFPSSYTWCIMVIFYLQQIPEPILPNLQKLSTQYSKIVRDNDYGNVN 1085
Query: 376 CTFVRDITKLQFHPSIPEQSTDSLTTLLFGFFEFY---SQYDFNNQGISLYLGS 426
C F RD T+ + S+ ++ ++ LL GFF +Y +QY F+ + + + S
Sbjct: 1086 CWFNRD-TEC-YRGSM-QKGRKNIALLLRGFFCYYGLTTQYSFDWEAYMIDISS 1136
Score = 40 (19.1 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 527 STETSEDSQVPVEPDFKKRKPISAQTLKAVQ 557
STE + V ++P KK+ A T K+V+
Sbjct: 1143 STEFKDCPFVVLDPFLKKKNLTKALTQKSVK 1173
>UNIPROTKB|K7GM92 [details] [associations]
symbol:ZCCHC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 Pfam:PF03828
Gene3D:4.10.60.10 SUPFAM:SSF57756 InterPro:IPR002058
GeneTree:ENSGT00550000074490 EMBL:CU694299 RefSeq:XP_003130685.2
Ensembl:ENSSSCT00000035632 GeneID:100516638 Uniprot:K7GM92
Length = 1497
Score = 199 (75.1 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 68/241 (28%), Positives = 123/241 (51%)
Query: 220 CKSSLGSERSQTLRHLETVGDLLQLFLPGCSQLFLPGCSQVKRILGARVPIIKYNHDMSA 279
C + G E ++ L + T+ +L ++ L S G + I A+VPI+K+ H S
Sbjct: 1065 CMTINGLETAEGLDCVRTIEELARV-LKKHS-----GLRNILPITTAKVPIVKFFHLRSG 1118
Query: 280 LECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDINLTNPTPGRWITNFSLT 339
LE D+S+ N AL+ LL + ID RV+ L +T+K + K ++ + + G +++++ T
Sbjct: 1119 LEVDISLYNTLALHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGS-LSSYAYT 1177
Query: 340 LLVLFYLQSVKVLPPLKLLIDEASLKDRR--ISEDGVNCTFVRDITKLQFHPSIPEQSTD 397
L+VL++LQ PP+ ++ E +++ I DG N F I +L + ++T+
Sbjct: 1178 LMVLYFLQQRN--PPVIPVLQEIYKGEKKPEIFVDGWNIYFFDQIDELPTYWPEYGKNTE 1235
Query: 398 SLTTLLFGFFEFYSQ-YDFNNQGISLYLGSPIP--KPEHGALYI--NNPLERGLNVSKNV 452
S+ L G FY++ +DF IS+ S + K + + YI +P + N+ +
Sbjct: 1236 SVGQLWLGLLRFYTEEFDFKEHVISIRRKSLLTTFKKQWTSKYIVIEDPFDLNHNLGAGL 1295
Query: 453 S 453
S
Sbjct: 1296 S 1296
Score = 44 (20.5 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 16/69 (23%), Positives = 29/69 (42%)
Query: 123 PPTEDHVRECLASCNTITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFP 182
PPT + + + + Q+ LHN ++ RL + +E P C++
Sbjct: 285 PPTPSQINAIGIAIDKVVQEFG-LHN----ENLEQRLE--IKRIMENVFQHKLPDCSLRL 337
Query: 183 FGSSVNNFG 191
+GSS + G
Sbjct: 338 YGSSCSRLG 346
Score = 40 (19.1 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 175 FPLCAIFPFGSSVNNFG 191
FP + FGSS N FG
Sbjct: 1040 FPGTKLSLFGSSKNGFG 1056
>UNIPROTKB|F1S4J1 [details] [associations]
symbol:ZCCHC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050265 "RNA uridylyltransferase activity"
evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 Pfam:PF03828 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR002058 GO:GO:0050265 GeneTree:ENSGT00550000074490
GO:GO:0031123 OMA:KYFALPH EMBL:CU694299 Ensembl:ENSSSCT00000011987
Uniprot:F1S4J1
Length = 1497
Score = 198 (74.8 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 71/241 (29%), Positives = 123/241 (51%)
Query: 220 CKSSLGSERSQTLRHLETVGDLLQLFLPGCSQLFLPGCSQVKRILGARVPIIKYNHDMSA 279
C + G E ++ L + T+ +L ++ L S G + I A+VPI+K+ H S
Sbjct: 1065 CMTINGLETAEGLDCVRTIEELARV-LKKHS-----GLRNILPITTAKVPIVKFFHLRSG 1118
Query: 280 LECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDINLTNPTPGRWITNFSLT 339
LE D+S+ N AL+ LL + ID RV+ L +T+K + K ++ + + G +++++ T
Sbjct: 1119 LEVDISLYNTLALHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGS-LSSYAYT 1177
Query: 340 LLVLFYLQ--SVKVLPPLKLLIDEASLKDRRISEDGVNCTFVRDITKLQFHPSIPEQSTD 397
L+VL++LQ + V+P L L I + K I DG N F I +L + ++T+
Sbjct: 1178 LMVLYFLQQRNPPVIPVL-LQIYKGEKKPE-IFVDGWNIYFFDQIDELPTYWPEYGKNTE 1235
Query: 398 SLTTLLFGFFEFYSQ-YDFNNQGISLYLGSPIP--KPEHGALYI--NNPLERGLNVSKNV 452
S+ L G FY++ +DF IS+ S + K + + YI +P + N+ +
Sbjct: 1236 SVGQLWLGLLRFYTEEFDFKEHVISIRRKSLLTTFKKQWTSKYIVIEDPFDLNHNLGAGL 1295
Query: 453 S 453
S
Sbjct: 1296 S 1296
Score = 44 (20.5 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 16/69 (23%), Positives = 29/69 (42%)
Query: 123 PPTEDHVRECLASCNTITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFP 182
PPT + + + + Q+ LHN ++ RL + +E P C++
Sbjct: 285 PPTPSQINAIGIAIDKVVQEFG-LHN----ENLEQRLE--IKRIMENVFQHKLPDCSLRL 337
Query: 183 FGSSVNNFG 191
+GSS + G
Sbjct: 338 YGSSCSRLG 346
Score = 40 (19.1 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 175 FPLCAIFPFGSSVNNFG 191
FP + FGSS N FG
Sbjct: 1040 FPGTKLSLFGSSKNGFG 1056
>ZFIN|ZDB-GENE-050522-536 [details] [associations]
symbol:papd4 "PAP associated domain containing 4"
species:7955 "Danio rerio" [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA;ISS] [GO:0043631 "RNA
polyadenylation" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
ZFIN:ZDB-GENE-050522-536 GO:GO:0005524 GO:GO:0005737 GO:GO:0046872
GO:GO:0006397 eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058
GO:GO:0043631 KO:K14079 HOVERGEN:HBG097533 CTD:167153
HOGENOM:HOG000088606 OrthoDB:EOG4P2Q22 EMBL:BC095312
IPI:IPI00607291 RefSeq:NP_001018436.1 UniGene:Dr.75639
ProteinModelPortal:Q503I9 GeneID:553626 KEGG:dre:553626
InParanoid:Q503I9 NextBio:20880363 Uniprot:Q503I9
Length = 489
Score = 178 (67.7 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 62/220 (28%), Positives = 112/220 (50%)
Query: 262 RILGARVPIIKYNHDMSALECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKD 321
+++ A+VPI+K+ +S +E DL+ N + LL + ++ RVRPLV IKKWA
Sbjct: 258 QLIRAKVPIVKFRDRISGVEFDLNFNNTVGIRNTFLLRTYAFVEKRVRPLVLVIKKWANH 317
Query: 322 INLTNPTPGRWITNFSLTLLVLFYLQSVK--VLPPLKLLIDEASLKDRRISEDGVNCTFV 379
+ + + G +++++L L+VL YLQ++ V+P L+ D + D ++ V +
Sbjct: 318 HCINDASRGT-LSSYTLVLMVLHYLQTLPEPVIPCLQR--DYPTCFDPKMDIHLVP-SGP 373
Query: 380 RDITKLQFHPSIPEQSTDSLTTLLFGFFEFYSQ-YDFNNQGISLYLGSPIPKP-----EH 433
DI P+ ++ SL L GF +Y+ + ++ Q IS+ + +PK +
Sbjct: 374 SDI------PAFVSRNQSSLGDLFLGFLRYYATVFKWDKQVISVRMARTLPKSNCKEWKD 427
Query: 434 GALYINNPLERGLNVSKNVSFEELERLKVEVRNASWTLES 473
+ + P R N ++ V ER+K E A++ +ES
Sbjct: 428 KFICVEEPFNR-TNTARAVH----ERMKFEAIKAAF-IES 461
Score = 51 (23.0 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 139 ITQQMTTLHNITKM--NDINTRLRFLVAYQVELALSGLFPLCAIFPFGSSVNNFG 191
++QQ+ L + +D+ + A Q ++ +FP +F GSS+N FG
Sbjct: 162 LSQQILNLFFACEQQSDDLEKKESCRAALQTDI--QKIFPCAKVFLGGSSLNGFG 214
>UNIPROTKB|E2RM29 [details] [associations]
symbol:ZCCHC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050265 "RNA uridylyltransferase activity"
evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 Pfam:PF03828 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR002058 GO:GO:0050265 GeneTree:ENSGT00550000074490
GO:GO:0031123 EMBL:AAEX03000505 Ensembl:ENSCAFT00000002070
NextBio:20851989 Uniprot:E2RM29
Length = 1497
Score = 199 (75.1 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 68/241 (28%), Positives = 123/241 (51%)
Query: 220 CKSSLGSERSQTLRHLETVGDLLQLFLPGCSQLFLPGCSQVKRILGARVPIIKYNHDMSA 279
C + G E ++ L + T+ +L ++ L S G + I A+VPI+K+ H S
Sbjct: 1064 CMTINGLETAEGLDCVRTIEELARV-LKKHS-----GLRNILPITTAKVPIVKFFHLRSG 1117
Query: 280 LECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDINLTNPTPGRWITNFSLT 339
LE D+S+ N AL+ LL + ID RV+ L +T+K + K ++ + + G +++++ T
Sbjct: 1118 LEVDISLYNTLALHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGS-LSSYAYT 1176
Query: 340 LLVLFYLQSVKVLPPLKLLIDEASLKDRR--ISEDGVNCTFVRDITKLQFHPSIPEQSTD 397
L+VL++LQ PP+ ++ E +++ I DG N F I +L + ++T+
Sbjct: 1177 LMVLYFLQQRN--PPVIPVLQEIYKGEKKPEIFVDGWNIYFFDQIDELPTYWPEYGKNTE 1234
Query: 398 SLTTLLFGFFEFYSQ-YDFNNQGISLYLGSPIP--KPEHGALYI--NNPLERGLNVSKNV 452
S+ L G FY++ +DF IS+ S + K + + YI +P + N+ +
Sbjct: 1235 SVGQLWLGLLRFYTEEFDFKEHVISIRRKSLLTTFKKQWTSKYIVIEDPFDLNHNLGAGL 1294
Query: 453 S 453
S
Sbjct: 1295 S 1295
Score = 44 (20.5 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 16/69 (23%), Positives = 29/69 (42%)
Query: 123 PPTEDHVRECLASCNTITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFP 182
PPT + + + + Q+ LHN ++ RL + +E P C++
Sbjct: 286 PPTPSQINAIGIAIDKVVQEFG-LHN----ENLEQRLE--IKRIMENVFQHKLPDCSLRL 338
Query: 183 FGSSVNNFG 191
+GSS + G
Sbjct: 339 YGSSCSRLG 347
Score = 40 (19.1 bits), Expect = 2.6e-10, Sum P(3) = 2.6e-10
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 175 FPLCAIFPFGSSVNNFG 191
FP + FGSS N FG
Sbjct: 1039 FPGTKLSLFGSSKNGFG 1055
Score = 39 (18.8 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 15/40 (37%), Positives = 19/40 (47%)
Query: 88 PVRSPFLWFRAN-KNKTK--LSDESDYAKINCDTHNVFPP 124
P+ S W N K+++K LSDE N DT F P
Sbjct: 82 PIYSQPAWMNENHKDQSKRWLSDE---LAGNSDTWREFKP 118
>UNIPROTKB|J9P044 [details] [associations]
symbol:ZCCHC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 Pfam:PF03828
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 InterPro:IPR002058 GeneTree:ENSGT00550000074490
OMA:KYFALPH EMBL:AAEX03000505 Ensembl:ENSCAFT00000049711
Uniprot:J9P044
Length = 1542
Score = 199 (75.1 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 68/241 (28%), Positives = 123/241 (51%)
Query: 220 CKSSLGSERSQTLRHLETVGDLLQLFLPGCSQLFLPGCSQVKRILGARVPIIKYNHDMSA 279
C + G E ++ L + T+ +L ++ L S G + I A+VPI+K+ H S
Sbjct: 1062 CMTINGLETAEGLDCVRTIEELARV-LKKHS-----GLRNILPITTAKVPIVKFFHLRSG 1115
Query: 280 LECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDINLTNPTPGRWITNFSLT 339
LE D+S+ N AL+ LL + ID RV+ L +T+K + K ++ + + G +++++ T
Sbjct: 1116 LEVDISLYNTLALHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGS-LSSYAYT 1174
Query: 340 LLVLFYLQSVKVLPPLKLLIDEASLKDRR--ISEDGVNCTFVRDITKLQFHPSIPEQSTD 397
L+VL++LQ PP+ ++ E +++ I DG N F I +L + ++T+
Sbjct: 1175 LMVLYFLQQRN--PPVIPVLQEIYKGEKKPEIFVDGWNIYFFDQIDELPTYWPEYGKNTE 1232
Query: 398 SLTTLLFGFFEFYSQ-YDFNNQGISLYLGSPIP--KPEHGALYI--NNPLERGLNVSKNV 452
S+ L G FY++ +DF IS+ S + K + + YI +P + N+ +
Sbjct: 1233 SVGQLWLGLLRFYTEEFDFKEHVISIRRKSLLTTFKKQWTSKYIVIEDPFDLNHNLGAGL 1292
Query: 453 S 453
S
Sbjct: 1293 S 1293
Score = 44 (20.5 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 16/69 (23%), Positives = 29/69 (42%)
Query: 123 PPTEDHVRECLASCNTITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFP 182
PPT + + + + Q+ LHN ++ RL + +E P C++
Sbjct: 286 PPTPSQINAIGIAIDKVVQEFG-LHN----ENLEQRLE--IKRIMENVFQHKLPDCSLRL 338
Query: 183 FGSSVNNFG 191
+GSS + G
Sbjct: 339 YGSSCSRLG 347
Score = 40 (19.1 bits), Expect = 2.9e-10, Sum P(3) = 2.9e-10
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 175 FPLCAIFPFGSSVNNFG 191
FP + FGSS N FG
Sbjct: 1037 FPGTKLSLFGSSKNGFG 1053
Score = 39 (18.8 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 15/40 (37%), Positives = 19/40 (47%)
Query: 88 PVRSPFLWFRAN-KNKTK--LSDESDYAKINCDTHNVFPP 124
P+ S W N K+++K LSDE N DT F P
Sbjct: 82 PIYSQPAWMNENHKDQSKRWLSDE---LAGNSDTWREFKP 118
>MGI|MGI:2387179 [details] [associations]
symbol:Zcchc6 "zinc finger, CCHC domain containing 6"
species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0050265 "RNA
uridylyltransferase activity" evidence=ISO] InterPro:IPR001878
InterPro:IPR015880 Pfam:PF00098 PROSITE:PS00028 PROSITE:PS50158
SMART:SM00343 SMART:SM00355 MGI:MGI:2387179 Pfam:PF03828
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
Gene3D:4.10.60.10 SUPFAM:SSF57756 eggNOG:COG5260 InterPro:IPR002058
GO:GO:0050265 GO:GO:0031123 KO:K13291 CTD:79670 EMBL:BC023880
EMBL:BC043111 EMBL:BC023438 EMBL:AK031043 IPI:IPI00262966
RefSeq:NP_705766.3 UniGene:Mm.233082 ProteinModelPortal:Q5BLK4
SMR:Q5BLK4 PhosphoSite:Q5BLK4 PaxDb:Q5BLK4 PRIDE:Q5BLK4
GeneID:214290 KEGG:mmu:214290 UCSC:uc007qvf.1 HOGENOM:HOG000155767
InParanoid:A1A4B1 OrthoDB:EOG40VVNP NextBio:374248
CleanEx:MM_ZCCHC6 Genevestigator:Q5BLK4
GermOnline:ENSMUSG00000035248 Uniprot:Q5BLK4
Length = 1491
Score = 195 (73.7 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 68/244 (27%), Positives = 123/244 (50%)
Query: 220 CKSSLGSERSQTLRHLETVGDLLQLFLPGCSQLFLPGCSQVKRILGARVPIIKYNHDMSA 279
C + G E ++ L + T+ +L ++ G + I A+VPI+K+ H S
Sbjct: 1058 CMTINGHETAEGLDCVRTIEELARVLRKHS------GLRNILPITTAKVPIVKFFHLRSG 1111
Query: 280 LECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDINLTNPTPGRWITNFSLT 339
LE D+S+ N AL+ LL + ID RV+ L +T+K + K ++ + + G +++++ T
Sbjct: 1112 LEVDISLYNTLALHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGS-LSSYAYT 1170
Query: 340 LLVLFYLQSVKVLPPLKLLIDEASLKDRR--ISEDGVNCTFVRDITKLQFHPSI-PE--Q 394
L+VL++LQ PP+ ++ E +++ I DG N F I +L P+ PE +
Sbjct: 1171 LMVLYFLQQRS--PPVIPVLQEIYKGEKKPEILVDGWNIYFFDQINEL---PTCWPEYGK 1225
Query: 395 STDSLTTLLFGFFEFYSQ-YDFNNQGISLYLGSPIP--KPEHGALYI--NNPLERGLNVS 449
+T+ + L G FY++ +DF IS+ S + K + + YI +P + N+
Sbjct: 1226 NTEPVGQLWLGLLRFYTEEFDFKEHVISIRRKSLLTTFKKQWTSKYIVIEDPFDLNHNLG 1285
Query: 450 KNVS 453
+S
Sbjct: 1286 AGLS 1289
Score = 40 (19.1 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 175 FPLCAIFPFGSSVNNFG 191
FP + FGSS N FG
Sbjct: 1033 FPGTKLSLFGSSKNGFG 1049
>POMBASE|SPAC821.04c [details] [associations]
symbol:cid13 "poly(A) polymerase Cid13" species:4896
"Schizosaccharomyces pombe" [GO:0003730 "mRNA 3'-UTR binding"
evidence=IC] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006378 "mRNA
polyadenylation" evidence=IDA] [GO:0033314 "mitotic DNA replication
checkpoint" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR002934 Pfam:PF01909 PomBase:SPAC821.04c
Pfam:PF03828 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0006378
GO:GO:0003730 GO:GO:0033314 eggNOG:COG5260 OrthoDB:EOG46QB1M
GO:GO:0004652 InterPro:IPR002058 PIR:T41715 RefSeq:NP_593157.1
ProteinModelPortal:Q9UT49 IntAct:Q9UT49 STRING:Q9UT49 PRIDE:Q9UT49
EnsemblFungi:SPAC821.04c.1 GeneID:2543204 KEGG:spo:SPAC821.04c
OMA:DICIIAP NextBio:20804227 Uniprot:Q9UT49
Length = 578
Score = 177 (67.4 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 57/204 (27%), Positives = 102/204 (50%)
Query: 256 GCSQVKRILGARVPIIKYNHDMSALECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTI 315
G +V I A+VPI+K L CD ++ + L+ + D RVRPL+ I
Sbjct: 137 GLKKVVCISTAKVPIVKVWDSELQLSCDCNINKTISTLNTRLMRSYVLCDPRVRPLIVMI 196
Query: 316 KKWAKDINLTNPTPGRWITNFSLTLLVLFYLQS--VKVLPPLKLLIDEASLKDRRISEDG 373
K WAK L + G +T+++++ +V+ +LQ +LP L++L L+D DG
Sbjct: 197 KYWAKRRCLNDAAEGGTLTSYTISCMVINFLQKRDPPILPSLQML---PHLQDSSTMTDG 253
Query: 374 VNCTFVRDITKLQFHPSIPEQSTDSLTTLLFGFFEFYSQ-YDFNNQGISLYLGSPIPKPE 432
++ +F D + H +++ +SL L FF F+ +D+ + +S+ G+ + K
Sbjct: 254 LDVSFFDDPDLV--H-GFGDKNEESLGILFVEFFRFFGYLFDYEHFVLSIRHGTFLSKRA 310
Query: 433 HGALY-INNPL--ERGLNVSKNVS 453
G + +NN L E + S+N++
Sbjct: 311 KGWQFQLNNFLCVEEPFHTSRNLA 334
Score = 42 (19.8 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 14/56 (25%), Positives = 24/56 (42%)
Query: 123 PPTEDHVRECLASCNT--ITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFP 176
PP + L +T I+ Q+ L++ +ND R+ ++E L FP
Sbjct: 33 PPVHPLSLKNLVDIDTDLISSQLYELYDSIILNDSGLERRYAFVQKLEQILKKEFP 88
>DICTYBASE|DDB_G0281431 [details] [associations]
symbol:DDB_G0281431 "Terminal uridylyltransferase 4"
species:44689 "Dictyostelium discoideum" [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] InterPro:IPR002934
Pfam:PF01909 dictyBase:DDB_G0281431 Pfam:PF03828 EMBL:AAFI02000041
eggNOG:COG5260 InterPro:IPR002058 GO:GO:0016779 RefSeq:XP_640670.1
ProteinModelPortal:Q54TZ1 EnsemblProtists:DDB0205577 GeneID:8623055
KEGG:ddi:DDB_G0281431 InParanoid:Q54TZ1 Uniprot:Q54TZ1
Length = 920
Score = 183 (69.5 bits), Expect = 2.3e-09, Sum P(3) = 2.3e-09
Identities = 54/185 (29%), Positives = 89/185 (48%)
Query: 256 GCSQVKRILGARVPIIKYNHDMSALECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTI 315
G + I +RVP+IK+ + DL + NL A+ + L+ + ID R+ PL I
Sbjct: 648 GYENIVTISQSRVPLIKFFDAKYDIHIDLCINNLLAIENSRLIKSYSSIDSRMEPLFMLI 707
Query: 316 KKWAKDINLTNPTPGRWITNFSLTLLVLFYLQSVKVLPPLKLLIDEASLKDRRISEDGVN 375
K WAK L N + ++++S L +F+LQ+ + P L L S K + + + VN
Sbjct: 708 KTWAKSKGL-NDAAEKSLSSYSYANLTVFFLQT-RQPPVLPCLHKGMSPKTKEVLVENVN 765
Query: 376 CTFVRDITKLQFHPSIPE------------QSTDSLTTLLFGFFEFYSQYDFNNQGISLY 423
+++ L + Q+ +S+ LLFGFF+FYS++DF N I +
Sbjct: 766 VSYLDPTIFLNSSNNGNNNNANGNYGFKLNQNKESVAELLFGFFDFYSKFDFENWIIDIR 825
Query: 424 LGSPI 428
G +
Sbjct: 826 RGEAV 830
Score = 40 (19.1 bits), Expect = 2.3e-09, Sum P(3) = 2.3e-09
Identities = 16/56 (28%), Positives = 27/56 (48%)
Query: 135 SCNTITQQMTTLHNITKMNDINTRLRFL-VAYQVELALSGLFPLCAIFPFGSSVNN 189
S ++ + +LH K N F +A + ++SG+ +F FGSSVN+
Sbjct: 564 SSTSLNSILLSLHKEVKCTSDNRFKSFDDLARILTRSISGI----RLFLFGSSVNS 615
Score = 39 (18.8 bits), Expect = 2.3e-09, Sum P(3) = 2.3e-09
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 61 VIVEMKDSQVTRRILN 76
V E +DS++TR+IL+
Sbjct: 80 VSTENQDSKLTRKILH 95
>DICTYBASE|DDB_G0268914 [details] [associations]
symbol:DDB_G0268914 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR003593
SMART:SM00382 dictyBase:DDB_G0268914 GO:GO:0005524
EMBL:AAFI02000004 GO:GO:0017111 eggNOG:COG1112 RefSeq:XP_647058.1
ProteinModelPortal:Q55EG2 EnsemblProtists:DDB0190122 GeneID:8616757
KEGG:ddi:DDB_G0268914 InParanoid:Q55EG2 OMA:ANCRVEN Uniprot:Q55EG2
Length = 4540
Score = 179 (68.1 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 59/212 (27%), Positives = 104/212 (49%)
Query: 264 LGARVPIIKY-NHDMSALECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDI 322
L ARVPII++ + D++ + D+ + + + L+ + +D RV+PL+ IK WA
Sbjct: 4304 LEARVPIIRFIDTDVN-VRFDMCFNSFMGQHNSLLIKDYTMVDSRVKPLIILIKWWASTK 4362
Query: 323 NLTNPTPGRWITNFSLTLLVLFYLQSVK--VLP----PLKLLIDEASLKDRRISEDGVNC 376
L N +++ L L++ +LQS+ VLP P DE +K + NC
Sbjct: 4363 CL-NDASQESFSSYCLINLIIHFLQSLSPPVLPNLQEPSPFHFDETKIKLK------ANC 4415
Query: 377 TFVRDITKLQFHPSIPEQSTDS---LTTLLFGFFEFYSQYDFNNQGISLYLGSPIPKPEH 433
++ K S+ S D+ + LLF FF++Y +++N IS+ G P+ ++
Sbjct: 4416 RVENNVVKYYDWTSLDFTSADNRLNIGQLLFKFFQYYCTFNYNEDVISISRGI-YPRDDY 4474
Query: 434 --GALYINNPLERGLNVSKNVSFEELERLKVE 463
G LY+ +P G N++ +++ E VE
Sbjct: 4475 CKGVLYVADPFIEGKNIAASLTPESFSSALVE 4506
>TAIR|locus:2102709 [details] [associations]
symbol:AT3G45750 "AT3G45750" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002686 GO:GO:0016740 eggNOG:COG5260
EMBL:BT008622 EMBL:AK229682 IPI:IPI00523946 RefSeq:NP_190161.2
UniGene:At.35992 ProteinModelPortal:Q7Y216 SMR:Q7Y216
EnsemblPlants:AT3G45750.1 GeneID:823717 KEGG:ath:AT3G45750
TAIR:At3g45750 InParanoid:Q7Y216 OMA:WREEERY PhylomeDB:Q7Y216
ProtClustDB:CLSN2680887 ArrayExpress:Q7Y216 Genevestigator:Q7Y216
Uniprot:Q7Y216
Length = 682
Score = 164 (62.8 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 38/113 (33%), Positives = 64/113 (56%)
Query: 254 LPGCSQVKR---ILGARVPIIKYNHDMSALECDLSMTNLTALYMAELLYLFGEIDWRVRP 310
L G QVK I A+VPI+K++ + +ECDLS+ N + ++++ + +ID R +
Sbjct: 138 LQGEGQVKNVESIFSAKVPIVKFSDQGTGVECDLSVENKDGILNSQIVRIISQIDGRFQK 197
Query: 311 LVFTIKKWAKDINLTNPTPGRWITNFSLTLLVLFYLQSVK--VLPPLKLLIDE 361
L +K WAK + N R + + S+TLLV +LQ+ +LPP +L+ +
Sbjct: 198 LCLLVKHWAK-AHEVNSALHRTLNSVSITLLVALHLQTQNPPILPPFSMLLKD 249
>WB|WBGene00019628 [details] [associations]
symbol:pup-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
Pfam:PF03828 GO:GO:0008340 GO:GO:0002009 GO:GO:0040010
eggNOG:COG5260 InterPro:IPR002058 EMBL:FO081618 PIR:D88451
RefSeq:NP_498100.1 ProteinModelPortal:Q09408 SMR:Q09408
DIP:DIP-48653N STRING:Q09408 EnsemblMetazoa:K10D2.2.1
EnsemblMetazoa:K10D2.2.2 GeneID:175708 KEGG:cel:CELE_K10D2.2
UCSC:K10D2.2.1 CTD:175708 WormBase:K10D2.2
GeneTree:ENSGT00700000105235 HOGENOM:HOG000017189 InParanoid:Q09408
OMA:MEADISY NextBio:889304 Uniprot:Q09408
Length = 508
Score = 155 (59.6 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 48/206 (23%), Positives = 97/206 (47%)
Query: 261 KRILGARVPIIKYNHDMSALECDLSMTNLTALYMAELLYLFGEID-WRVRPLVFTIKKWA 319
+R + A+VPI+++ +E D+S N AL+ +LL + + D R+ L +K WA
Sbjct: 223 ERYVNAKVPIVRFRSSDMDMEADISYKNDLALHNTQLLQQYCKWDPERLPTLGVWVKAWA 282
Query: 320 KDINLTNPTPGRWITNFSLTLLVLFYLQSVKVLPPLKLLIDEASLKDRRISEDGVNCTFV 379
K + + + G +++++ ++++ YLQ V+ +P L L + K + G N +
Sbjct: 283 KRSGVGDASKGS-LSSYAWIVMLIHYLQQVEPIPVLPCLQEMNHQKSENVYVQGYNTYYW 341
Query: 380 RDITKLQFHPSIPEQSTDSLTTLLFGFFEFYSQY-DFNNQGISLYLGSPIPKPEHGALY- 437
+ + + + S+ L GF ++Y+ Y D++ I + KP+ Y
Sbjct: 342 KFVDTAR-----TRRCRASVVDLFVGFLDYYATYFDYSTNVIQMVSKKLEFKPDRWCKYP 396
Query: 438 --INNPLERGLNVSKNVSFEELERLK 461
I +P E N+++ V E ++
Sbjct: 397 MCIADPFETDHNLAQGVDMPMFEYIR 422
>WB|WBGene00019629 [details] [associations]
symbol:cid-1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000003
"reproduction" evidence=IMP] [GO:0050265 "RNA uridylyltransferase
activity" evidence=IDA] [GO:0071076 "RNA 3' uridylation"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P
granule" evidence=IDA] [GO:0000794 "condensed nuclear chromosome"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] InterPro:IPR001878 InterPro:IPR007087
InterPro:IPR015880 InterPro:IPR017896 PROSITE:PS00028
PROSITE:PS51379 SMART:SM00343 SMART:SM00355 Pfam:PF03828
GO:GO:0048471 GO:GO:0008270 GO:GO:0000003 GO:GO:0003676
GO:GO:0051536 GO:GO:0000794 Gene3D:4.10.60.10 GO:GO:0043186
eggNOG:COG5260 InterPro:IPR002058 GO:GO:0050265 GO:GO:0071076
GeneTree:ENSGT00550000074490 EMBL:FO081618 PIR:C88451
RefSeq:NP_498099.1 ProteinModelPortal:Q09409 IntAct:Q09409
STRING:Q09409 PaxDb:Q09409 EnsemblMetazoa:K10D2.3 GeneID:175707
KEGG:cel:CELE_K10D2.3 UCSC:K10D2.3 CTD:175707 WormBase:K10D2.3
InParanoid:Q09409 OMA:CSDIDIC NextBio:889300 Uniprot:Q09409
Length = 1425
Score = 170 (64.9 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 57/211 (27%), Positives = 104/211 (49%)
Query: 257 CSQVKR---ILGARVPIIKYNHDMS---ALECDLSMTNLTALYMAELL--YLFGEIDWRV 308
C VKR I+ A+VPI+K+ +S ++ D+S N+ A+Y LL Y D R
Sbjct: 1100 CHLVKRVQAIVTAKVPIVKFQVKLSNGAIIDVDISYYNILAIYNTALLKEYSLWTPDKRF 1159
Query: 309 RPLVFTIKKWAKDINLTNPTPGRWITNFSLTLLVLFYLQSVKVLPPLKLLIDEASLKDRR 368
L +K WAK+ + + + G ++++ ++++ YLQ+ PP+ + E D R
Sbjct: 1160 AKLALFVKTWAKNCEIGDASRGS-LSSYCHVIMLISYLQNCD--PPVLPRLQEDFRSDNR 1216
Query: 369 ISE--DGVNCTFVR-DITKLQFHPSIPEQSTDSLTTLLFGFFEFYSQYDFNNQGISL--- 422
D + +F + + + LQ P ++ +S LL G+F++YS++DF N +
Sbjct: 1217 ERRLVDNWDTSFAQVETSLLQRWP----KNKESCAQLLIGYFDYYSRFDFRNFVVQCRRE 1272
Query: 423 YLGSPIPKPEHGALYINNPLERGLNVSKNVS 453
+ S + K L + +P + N+S V+
Sbjct: 1273 MILSKMEKEWPRPLCVEDPFDLSHNLSSGVN 1303
Score = 37 (18.1 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 10/39 (25%), Positives = 15/39 (38%)
Query: 117 DTHNVFPPTEDHVRECLASCNTITQQMTTLHNITKMNDI 155
D FP + +C NTI L + T +D+
Sbjct: 262 DRLEAFPEAIYYCEKCDYHINTIGHAKAHLESSTHFDDV 300
>FB|FBgn0035889 [details] [associations]
symbol:mkg-p "monkey king protein" species:7227 "Drosophila
melanogaster" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] InterPro:IPR002934
InterPro:IPR015880 Pfam:PF01909 SMART:SM00355 GO:GO:0008270
GO:GO:0005622 eggNOG:COG5260 GO:GO:0016779 EMBL:AY562976
ProteinModelPortal:Q6Q376 SMR:Q6Q376 PRIDE:Q6Q376
FlyBase:FBgn0035889 InParanoid:Q6Q376 OrthoDB:EOG4WH71R
ArrayExpress:Q6Q376 Bgee:Q6Q376 Uniprot:Q6Q376
Length = 659
Score = 150 (57.9 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 54/176 (30%), Positives = 89/176 (50%)
Query: 258 SQVKRILGARVPIIKYNHDMSALECDLSMTNLTALYMAELLYLFGEIDWR---VRPLVFT 314
+ V I A VPII+ H ++ L D++M+N ++Y + + GE+ +R +R L
Sbjct: 172 ADVFTIRHASVPIIRCKHQLTGLNIDINMSNPNSIYNSRFV---GELMFRNERIRELCLF 228
Query: 315 IKKWAKDINLTNPTPGRWITNFSLTLLVLFYLQSVKVLPPLKLLIDEASLKDRRISEDGV 374
+K WAK + L + G +T++ L L++ LQ +++P +K L SL I GV
Sbjct: 229 LKIWAKKLKLISHG-G--MTSYCLISLIIVNLQVNRLVPSVKEL---QSLCPPVILS-GV 281
Query: 375 NCTFVRDITKLQFHPSIPEQSTDSLTTLLFGFFEFYSQYDFNNQGISLYLGSPIPK 430
N + D+T P IP + T LL FF +Y +F+ +S +LG + K
Sbjct: 282 NYAYSLDLT-----PPIPARLTT--LDLLKNFFIYYCTVNFDKSVLSPFLGGCVDK 330
>UNIPROTKB|Q5T852 [details] [associations]
symbol:MTPAP "Poly(A) RNA polymerase, mitochondrial"
species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] GO:GO:0005739 EMBL:AL161651 EMBL:AL353796
UniGene:Hs.173946 HGNC:HGNC:25532 HOGENOM:HOG000115438
IPI:IPI00884218 SMR:Q5T852 Ensembl:ENST00000417581 Uniprot:Q5T852
Length = 219
Score = 135 (52.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 36/106 (33%), Positives = 55/106 (51%)
Query: 87 IPVRSPFLWFRANKNKTKLSDESDYAKINCDTHNVFPPTEDHVRECLASCNTITQQMTTL 146
IP RS F + KN+T S+ +++ + N P + + E L +I Q+ TL
Sbjct: 77 IPFRSRFFNLKL-KNQT-----SERSRVR--SSNQLPRSNKQLFELLCYAESIDDQLNTL 128
Query: 147 HNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFPFGSSVNNFGK 192
++ + NT+LR+L +E + FP C + PFGSSVN FGK
Sbjct: 129 LKEFQLTEENTKLRYLTCSLIEDMAAAYFPDCIVRPFGSSVNTFGK 174
>TAIR|locus:2102714 [details] [associations]
symbol:AT3G45760 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP002686 GO:GO:0016740 IPI:IPI00532663 RefSeq:NP_190162.4
UniGene:At.53771 ProteinModelPortal:F4J6R3 SMR:F4J6R3
EnsemblPlants:AT3G45760.1 GeneID:823719 KEGG:ath:AT3G45760
OMA:NTMSIAS Uniprot:F4J6R3
Length = 474
Score = 143 (55.4 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 31/101 (30%), Positives = 57/101 (56%)
Query: 263 ILGARVPIIKYNHDMSALECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDI 322
IL ARVPI+++ + +ECDL++ + + ++++ + +ID R + L IK WA+
Sbjct: 150 ILSARVPIVRFCDQGTGIECDLTVESKDGILTSQIIRIISQIDDRFQKLCLLIKHWARAH 209
Query: 323 NLTNPTPGRWITNFSLTLLVLFYLQ--SVKVLPPLKLLIDE 361
+ N + + + S+T+LV +LQ S +LPP L +
Sbjct: 210 GVNNASHNT-LNSISITMLVAHHLQTQSPPILPPFSTLFKD 249
>UNIPROTKB|E1C833 [details] [associations]
symbol:PAPD4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA] [GO:0071044 "histone mRNA catabolic
process" evidence=IEA] InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
GO:GO:0005634 GO:GO:0071044 GO:GO:0004652 InterPro:IPR002058
GO:GO:0043631 GeneTree:ENSGT00550000074490 OMA:NQKTEAR
EMBL:AADN02046111 EMBL:AADN02046112 EMBL:AADN02046113
EMBL:AADN02046114 EMBL:AADN02046115 EMBL:AADN02046116
IPI:IPI00587880 Ensembl:ENSGALT00000023911 Uniprot:E1C833
Length = 496
Score = 125 (49.1 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 53/222 (23%), Positives = 103/222 (46%)
Query: 262 RILGARVPIIKYNHDMSALECDLSMTNLTALYMAELLYLFG-EIDWRVRPLVFTIKKWAK 320
+++ A+VPI+K+ +S +E DL++ N+ + LL + + V L + W++
Sbjct: 270 QLIRAKVPIVKFRDKVSCVEFDLNVNNIVGIRNTFLLRTYAYNYENSVHMLKHSTSVWSR 329
Query: 321 DINLTNPTPGRWIT-NFSLTLLVLFYLQSVK--VLPPLKLLIDEASLKDRRIS-EDGVNC 376
P R N L L+VL Y+ ++ +LP L+ E+ ++ C
Sbjct: 330 R---ALPEAARTTAENSRLLLMVLVYVVALPEPILPSLQKNYPESFDPTMQLHLVHQAPC 386
Query: 377 TFVRDITKLQFHPSIPEQSTDSLTTLLFGFFEFYS-QYDFNNQGISLYLGSPIPKPE--- 432
T P ++ SL LL GFF++Y+ ++D+++Q IS+ IP+P+
Sbjct: 387 TI----------PPYLSKNESSLGELLIGFFKYYATEFDWSHQMISVREAKAIPRPDDIE 436
Query: 433 --HGALYINNPLERGLNVSKNV-SFEELERLKVEVRNASWTL 471
+ + + P +R N ++ V ++ + +K E SW +
Sbjct: 437 WRNKYICVEEPFDR-TNTARAVHEKQKFDTIKEEFLK-SWQI 476
Score = 60 (26.2 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 13/53 (24%), Positives = 26/53 (49%)
Query: 139 ITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFPFGSSVNNFG 191
++QQ+ L + + + L +++ + +FP +F GSS+N FG
Sbjct: 172 LSQQVLELFQACQQQTCDLNRKELCRSELQREIQRIFPCSRLFLVGSSLNGFG 224
Score = 38 (18.4 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 242 LQLFLPGCSQLFLPGCS 258
+Q P CS+LFL G S
Sbjct: 204 IQRIFP-CSRLFLVGSS 219
>DICTYBASE|DDB_G0268660 [details] [associations]
symbol:DDB_G0268660 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268660
Pfam:PF03828 GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0004386
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 InterPro:IPR002058
ProtClustDB:CLSZ2429765 RefSeq:XP_646847.2
ProteinModelPortal:Q55F23 EnsemblProtists:DDB0304625 GeneID:8616530
KEGG:ddi:DDB_G0268660 InParanoid:Q55F23 Uniprot:Q55F23
Length = 2314
Score = 141 (54.7 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 46/171 (26%), Positives = 85/171 (49%)
Query: 261 KRILGARVPIIKYNHDMSALECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAK 320
KRI A+VPII++ S + D+ ++ + + + LL + ID R R L +K WA
Sbjct: 2058 KRI-SAKVPIIRFKEISSGIHFDMCFHSMMSYHNSLLLGEYCSIDKRCRDLALLVKWWAV 2116
Query: 321 DINLTNPTPGRWITNFSLTLLVLFYLQSVK--VLPPLKLLIDEASLK---DRRI----SE 371
+L N + ++F L +V+ +LQS+ +LP L+ ++ K DR + S+
Sbjct: 2117 SKDLNNAAE-KTFSSFCLVNMVIHFLQSLNPPILPNLQTTSNQLLEKYSTDRNLIKLKSQ 2175
Query: 372 DGVNCTFVRDITKLQFHPSIPEQSTDSLTTLLFGFFEFYSQYDFNNQGISL 422
V V+ F+ P+++ ++ L + FF +YS +++ IS+
Sbjct: 2176 TIVENYLVKYYDWSSFNKFEPKRNKLTIAQLFYQFFYYYSTFNYKENIISI 2226
>DICTYBASE|DDB_G0268662 [details] [associations]
symbol:DDB_G0268662 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268662
Pfam:PF03828 GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0004386
eggNOG:COG1112 InterPro:IPR002058 ProtClustDB:CLSZ2429765
RefSeq:XP_646848.1 ProteinModelPortal:Q55F22
EnsemblProtists:DDB0304624 GeneID:8616531 KEGG:ddi:DDB_G0268662
InParanoid:Q55F22 Uniprot:Q55F22
Length = 2523
Score = 138 (53.6 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 44/172 (25%), Positives = 86/172 (50%)
Query: 260 VKRILGARVPIIKYNHDMSALECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWA 319
+++ A+VPII++ S + D+ ++ + + + LL + ID R R LV +K WA
Sbjct: 2265 IEKRTDAKVPIIRFKEISSGVHFDMCFNSMMSYHNSLLLGEYCSIDNRSRDLVLLVKWWA 2324
Query: 320 KDINLTNPTPGRWITNFSLTLLVLFYLQSVK--VLPPLKL----LIDEASLKDRRI---S 370
+L N + ++F L +V+ +LQS+ +LP L+ L+++ S I S
Sbjct: 2325 VSKDLNNAAE-KTFSSFCLVNMVIHFLQSLNPPILPNLQTTSNQLLEKYSTNRNLIKLKS 2383
Query: 371 EDGVNCTFVRDITKLQFHPSIPEQSTDSLTTLLFGFFEFYSQYDFNNQGISL 422
+ V V+ F+ P+++ ++ L + FF +YS +++ IS+
Sbjct: 2384 QTIVENYLVKYYDWSSFNKFEPKRNKLTIAQLFYQFFYYYSTFNYKENIISI 2435
>UNIPROTKB|E9PKX1 [details] [associations]
symbol:ZCCHC11 "Terminal uridylyltransferase 4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001878 InterPro:IPR002934 Pfam:PF01909
PROSITE:PS50158 SMART:SM00343 Pfam:PF03828 GO:GO:0005737
GO:GO:0005730 GO:GO:0008270 GO:GO:0003676 EMBL:AL513218
InterPro:IPR002058 GO:GO:0016779 EMBL:AL138849 HGNC:HGNC:28981
ChiTaRS:ZCCHC11 EMBL:AL591167 IPI:IPI00976712
ProteinModelPortal:E9PKX1 SMR:E9PKX1 Ensembl:ENST00000484723
ArrayExpress:E9PKX1 Bgee:E9PKX1 Uniprot:E9PKX1
Length = 906
Score = 119 (46.9 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 32/101 (31%), Positives = 52/101 (51%)
Query: 220 CKSSLGSERSQTLRHLETVGDLLQLFLPGCSQLFLPGCSQVKRILGARVPIIKYNHDMSA 279
C + G E ++ L E + +L ++ PG + I A+VPI+K+ H S
Sbjct: 772 CMTLEGHENAEKLNCKEIIENLAKILKRH------PGLRNILPITTAKVPIVKFEHRRSG 825
Query: 280 LECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAK 320
LE D+S+ N A + +L + ID RV+ L +T+K +AK
Sbjct: 826 LEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAK 866
Score = 113 (44.8 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 31/90 (34%), Positives = 46/90 (51%)
Query: 266 ARVPIIKYNHDMSALECDLSMTNLTALYMAELLYLFGEIDWRVRPLVFTIKKWAKDINLT 325
A+VP++ S L C +S N A +LL G+I+ PLV + WAK +
Sbjct: 210 AKVPVVVCRDRKSGLLCRVSAGNDMACLTTDLLTALGKIEPVFIPLVLAFRYWAKLCYID 269
Query: 326 NPTPGRWITNFSLTLLVLFYLQSVKVLPPL 355
+ T G I ++ L+V+F+LQ K PPL
Sbjct: 270 SQTDGG-IPSYCFALMVMFFLQQRK--PPL 296
Score = 59 (25.8 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 17/68 (25%), Positives = 33/68 (48%)
Query: 123 PPTEDHVRECLASCNTITQQMTTLHNITKMNDINTRLRFLVAYQVELALSGLFPLCAIFP 182
PP+ H LA+ + ++ H IT D + R+R + ++ ++ P C++
Sbjct: 105 PPSPAH----LAALSVAVIELAKEHGIT---DDDLRVRQEIVEEMSKVITTFLPECSLRL 157
Query: 183 FGSSVNNF 190
+GSS+ F
Sbjct: 158 YGSSLTRF 165
>WB|WBGene00003499 [details] [associations]
symbol:mut-2 species:6239 "Caenorhabditis elegans"
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0016246
"RNA interference" evidence=IMP] [GO:0000335 "negative regulation
of transposition, DNA-mediated" evidence=IMP] [GO:0045132 "meiotic
chromosome segregation" evidence=IMP] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IDA] InterPro:IPR002934 Pfam:PF01909
Pfam:PF03828 GO:GO:0009792 GO:GO:0048471 GO:GO:0016246
GO:GO:0045132 EMBL:FO081226 eggNOG:COG5260 InterPro:IPR002058
GO:GO:0016779 GeneTree:ENSGT00550000074490 GO:GO:0000335 PIR:H87803
RefSeq:NP_491834.1 ProteinModelPortal:O44768 DIP:DIP-27246N
MINT:MINT-1113744 STRING:O44768 PaxDb:O44768 PRIDE:O44768
EnsemblMetazoa:K04F10.6a GeneID:187005 KEGG:cel:CELE_K04F10.6
UCSC:K04F10.6a CTD:187005 WormBase:K04F10.6a HOGENOM:HOG000019766
InParanoid:O44768 OMA:TWLFNIV NextBio:933748 ArrayExpress:O44768
Uniprot:O44768
Length = 441
Score = 126 (49.4 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 44/173 (25%), Positives = 84/173 (48%)
Query: 262 RILGARVPIIKYNHDMSALECDLSMTN---LTALYMAELLYLFGEIDWRVRPLVFTIKKW 318
+++ A++ I+K + ++CD+S+ L++++ + L+ ID R PL +K+W
Sbjct: 169 QLVQAQIQILKVM-TVDGIDCDISVVMDRFLSSMHNSFLIRHLAHIDGRFAPLCAIVKQW 227
Query: 319 AKDINLTNPTPGRWITNFSLTLLVLFYLQSVKVLPPLKLLIDEASLKDRRIS-EDGVNCT 377
A + +P G + +++L LLV+ +LQ PP+ + E KD I+ +D V +
Sbjct: 228 AASTKVKDPKDGGF-NSYALVLLVIHFLQC-GTFPPILPNLQEIFKKDNFIAWDDKVYPS 285
Query: 378 FVRDITKLQFH-PSIPEQSTDSLTTLLFGFFEFYSQYDFNNQGISLYLGS-PI 428
+ L P I + L L F +YS ++F Y+G+ P+
Sbjct: 286 ILNFGAPLPKPLPRIAPNNAP-LARLFIEFLYYYSMFNFKEN----YIGARPV 333
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.134 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 563 545 0.00095 119 3 11 22 0.38 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 72
No. of states in DFA: 627 (67 KB)
Total size of DFA: 319 KB (2163 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 46.89u 0.10s 46.99t Elapsed: 00:00:04
Total cpu time: 46.91u 0.10s 47.01t Elapsed: 00:00:04
Start: Thu Aug 15 15:12:11 2013 End: Thu Aug 15 15:12:15 2013