Your job contains 1 sequence.
>psy10461
YIPIRTPARKLTATPTPIAGTPTGFFIQQEDKTAKYMDNQPKGNLPFLKPEDAQYFDKLL
SNGKHCGKTPDVGSRTYAEVMREQLVRGEEKEVRKKLQDKAKDGTLKAVPTNGEAKAAPK
KRGRWDQTSDGDVTPAKKKVAAAEWEKEADVNIEAQIRDIQNRKKDVSEGGGEEKQKRVG
LGESGYFDSDIYDGGGKFEGYVKSIADDDFDYQASFNQNKRSGYTAPAALLNDIAQSEKD
YDPFADRRQKTVAEKEDEYRAIRRRMIISPERVDPFAEGHLAAMTPEQIQAYRWEREIDE
RNRPLTDDELEAMFPPGYKVLQPPAGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAM
FPPGYKVLQPPAGYIPIRTPARKLTATPTPIAGTPTGFFIQQEDKTAKYMDNQPKGNLPF
LKPEDAQYFDKLLVDVDEDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQITDKAREF
GAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDED
YYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLP
FLKAGGVTPAATRWDETPGHPKPGAETPGATPSTRLWDATPGHATPGAATPGRETPSHDK
AQSSIRRNRWDETPKTERETPGHSSGWAETPKTDRAGPGGDLIQETPTPGGVSSKRRSRW
DETPQATPSGAMTPSAATPGGMTPSTPITPHVGSTPLMTPSGVTPTGNKAMAMATPTPGH
LAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAACFFIGCSMFAPTVW
HLWIYTRSANANFYFGVTLAFATSQIFLLTDLLFAYLKRDYTLENGIQKTIKGKPARLVG
ASEIINRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAFQEQTT
EDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMKTC
QEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILK
NRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIA
KAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQN
GVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVYGFGCE
DALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHPARKVRDVY
WKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYELDYVL
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10461
(1359 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0031266 - symbol:CG2807 species:7227 "Drosophila m... 2245 0. 3
UNIPROTKB|E1C2C3 - symbol:SF3B1 "Uncharacterized protein"... 2162 0. 3
UNIPROTKB|O75533 - symbol:SF3B1 "Splicing factor 3B subun... 2161 0. 3
UNIPROTKB|G3V7T6 - symbol:Sf3b1 "Splicing factor 3b, subu... 2161 0. 3
UNIPROTKB|F1MX61 - symbol:SF3B1 "Uncharacterized protein"... 2161 0. 3
MGI|MGI:1932339 - symbol:Sf3b1 "splicing factor 3b, subun... 2158 0. 3
UNIPROTKB|F1SMZ9 - symbol:SF3B1 "Uncharacterized protein"... 2150 0. 3
ZFIN|ZDB-GENE-040827-3 - symbol:sf3b1 "splicing factor 3b... 2142 0. 3
TAIR|locus:2173333 - symbol:AT5G64270 species:3702 "Arabi... 2009 0. 3
WB|WBGene00011605 - symbol:T08A11.2 species:6239 "Caenorh... 1909 0. 3
DICTYBASE|DDB_G0275957 - symbol:sf3b1 "splicing factor 3B... 1900 7.6e-289 3
ASPGD|ASPL0000047410 - symbol:AN2420 species:162425 "Emer... 1742 5.4e-288 3
UNIPROTKB|G4NCP7 - symbol:MGG_00356 "Splicing factor 3B s... 1737 1.8e-287 3
POMBASE|SPAC27F1.09c - symbol:prp10 "U2 snRNP-associated ... 1647 7.5e-263 3
CGD|CAL0003514 - symbol:orf19.2675 species:5476 "Candida ... 1233 7.3e-195 3
SGD|S000004901 - symbol:HSH155 "U2-snRNP associated splic... 1263 3.3e-186 3
RGD|620148 - symbol:Sf3b1 "splicing factor 3b, subunit 1"... 458 5.0e-67 2
FB|FBgn0032052 - symbol:CG13089 species:7227 "Drosophila ... 222 8.2e-15 1
UNIPROTKB|Q5JWU1 - symbol:PIGU "Phosphatidylinositol glyc... 186 4.5e-13 1
UNIPROTKB|F1N7F8 - symbol:PIGU "Uncharacterized protein" ... 198 3.9e-12 1
MGI|MGI:3039607 - symbol:Pigu "phosphatidylinositol glyca... 196 6.5e-12 1
UNIPROTKB|E2R736 - symbol:PIGU "Uncharacterized protein" ... 196 6.6e-12 1
UNIPROTKB|Q9H490 - symbol:PIGU "Phosphatidylinositol glyc... 196 6.6e-12 1
RGD|727825 - symbol:Pigu "phosphatidylinositol glycan anc... 196 6.6e-12 1
UNIPROTKB|Q8CHJ0 - symbol:PIGU "Phosphatidylinositol glyc... 195 8.4e-12 1
UNIPROTKB|E1BST8 - symbol:PIGU "Uncharacterized protein" ... 194 1.1e-11 1
ZFIN|ZDB-GENE-100629-1 - symbol:pigu "phosphatidylinosito... 186 8.2e-11 1
POMBASE|SPAP8A3.09c - symbol:paa1 "protein phosphatase re... 146 3.2e-06 1
ASPGD|ASPL0000015805 - symbol:AN3826 species:162425 "Emer... 133 4.5e-05 1
TAIR|locus:2124142 - symbol:AT4G18670 "AT4G18670" species... 137 5.0e-05 1
UNIPROTKB|E7EVL4 - symbol:PIGU "Phosphatidylinositol glyc... 129 0.00013 1
DICTYBASE|DDB_G0282011 - symbol:DDB_G0282011 "GPI transam... 128 0.00026 1
WB|WBGene00011914 - symbol:T22C1.3 species:6239 "Caenorha... 133 0.00056 2
DICTYBASE|DDB_G0290521 - symbol:DDB_G0290521 species:4468... 123 0.00061 1
TAIR|locus:2085994 - symbol:PP2AA2 "protein phosphatase 2... 120 0.00067 2
SGD|S000004451 - symbol:GAB1 "GPI transamidase subunit" s... 122 0.00067 1
SGD|S000000014 - symbol:TPD3 "Regulatory subunit A of the... 111 0.00070 2
>FB|FBgn0031266 [details] [associations]
symbol:CG2807 species:7227 "Drosophila melanogaster"
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;ISS] [GO:0005686 "U2 snRNP"
evidence=ISS;IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] InterPro:IPR016024 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AE014134 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0005686 KO:K12828 OMA:GVEAQYI
InterPro:IPR015016 Pfam:PF08920 GeneTree:ENSGT00390000018393
RefSeq:NP_608534.2 ProteinModelPortal:Q9VPR5 SMR:Q9VPR5
IntAct:Q9VPR5 MINT:MINT-1730767 STRING:Q9VPR5
EnsemblMetazoa:FBtr0078068 EnsemblMetazoa:FBtr0332340 GeneID:33235
KEGG:dme:Dmel_CG2807 UCSC:CG2807-RA FlyBase:FBgn0031266
InParanoid:Q9VPR5 OrthoDB:EOG4Z8WBG PhylomeDB:Q9VPR5 ChiTaRS:CG2807
GenomeRNAi:33235 NextBio:782588 ArrayExpress:Q9VPR5 Bgee:Q9VPR5
Uniprot:Q9VPR5
Length = 1340
Score = 2245 (795.3 bits), Expect = 0., Sum P(3) = 0.
Identities = 432/464 (93%), Positives = 444/464 (95%)
Query: 896 ARLVGASEIINRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAF 955
A VGASEIINRVVDDLKDENEQYRKMVME++EK M NLGAADIDSRLEEQLIDGILYAF
Sbjct: 877 ANKVGASEIINRVVDDLKDENEQYRKMVMETVEKIMGNLGAADIDSRLEEQLIDGILYAF 936
Query: 956 QEQTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAV 1015
QEQTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAV
Sbjct: 937 QEQTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAV 996
Query: 1016 VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL 1075
VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL
Sbjct: 997 VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL 1056
Query: 1076 TPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFXXXXXXKAHKKAIRRATVNT 1135
TPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICF KAHKKAIRRATVNT
Sbjct: 1057 TPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKAHKKAIRRATVNT 1116
Query: 1136 FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE 1195
FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAE+C PFTVLPALMNEYRVPE
Sbjct: 1117 FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAESCRPFTVLPALMNEYRVPE 1176
Query: 1196 LNVQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVY 1255
LNVQNGVLK+LSFLFEYIGEMGKDYIYAV PLLEDALMDRDLVHRQTAC+ IKHM+LGVY
Sbjct: 1177 LNVQNGVLKSLSFLFEYIGEMGKDYIYAVCPLLEDALMDRDLVHRQTACSAIKHMSLGVY 1236
Query: 1256 GFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHPARK 1315
GFGCEDALTHLLNYVWPNIFETSPHLVQAFMD+V+GLRV+LGP++ILQY LQGLFHPARK
Sbjct: 1237 GFGCEDALTHLLNYVWPNIFETSPHLVQAFMDSVDGLRVSLGPIKILQYTLQGLFHPARK 1296
Query: 1316 VRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYELDYVL 1359
VRDVYWKIYNSLYIGGQDALI+ YPRI ND KN Y RYELDY L
Sbjct: 1297 VRDVYWKIYNSLYIGGQDALIAGYPRITNDPKNQYERYELDYTL 1340
Score = 1254 (446.5 bits), Expect = 0., Sum P(3) = 0.
Identities = 246/294 (83%), Positives = 263/294 (89%)
Query: 315 PPGYKVLQ---PPAGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPP 371
P G K + P AG LAAMTPEQ+QAYRWE+EIDERNRP TD+EL+ +FPPGYK+L PP
Sbjct: 393 PIGVKAMAMATPSAGALAAMTPEQLQAYRWEKEIDERNRPYTDEELDQIFPPGYKILPPP 452
Query: 372 AGYIPIRTPARKLXXXXXXXXXXXXXFFIQQEDKTAKYMDNQPKG-NLPFLKPEDAQYFD 430
AGY+P+RTP RKL FFIQ EDK AK+MDNQPKG NLPF+KPEDAQYFD
Sbjct: 453 AGYVPLRTPGRKLMATPTPIAGTPAGFFIQVEDKNAKFMDNQPKGQNLPFMKPEDAQYFD 512
Query: 431 KLLVDVDEDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQIL 490
KLLVDV+EDSLSPEE KERKIMKLLL IKNG+PPMRK+ALRQITDKAREFGAGPLFNQIL
Sbjct: 513 KLLVDVNEDSLSPEELKERKIMKLLLTIKNGSPPMRKSALRQITDKAREFGAGPLFNQIL 572
Query: 491 PLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREI 550
PLLMSPTLEDQERHLLVKVIDR+LYKLDDLVRPYVHKILVVIEPLLIDED+YAR+EGREI
Sbjct: 573 PLLMSPTLEDQERHLLVKVIDRVLYKLDDLVRPYVHKILVVIEPLLIDEDHYARIEGREI 632
Query: 551 ISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFLKA 604
ISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFLKA
Sbjct: 633 ISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFLKA 686
Score = 671 (241.3 bits), Expect = 0., Sum P(3) = 0.
Identities = 146/229 (63%), Positives = 163/229 (71%)
Query: 608 TPAATRWDETPGHPKPGAETPGATPS--TRLWDXXXXXXXXXXXXXXRETPSHDKAQSSI 665
TP RWDETPGH G+ETPGATP TR+WD ETP H+K S
Sbjct: 242 TPGDHRWDETPGHK--GSETPGATPGLGTRIWDATPAHAVTPG----HETPGHEK---SA 292
Query: 666 RRNRWDETPKTERETPGHSSGWAETPKTDRAGPGG--DLIQETPTPGGVSSKRRSRWDET 723
RRNRWDETPKTERETPGHS GWAETPK DR G GG + I TPG +SKRRSRWDET
Sbjct: 293 RRNRWDETPKTERETPGHS-GWAETPKPDRTGSGGGAESISIESTPG--ASKRRSRWDET 349
Query: 724 PQ-ATPSGAMTP---SAATPGGMTPSTPITPHV--G-STPLMTPSGVTPTGNKAMAMATP 776
P ATP A+TP SA TP MTPS +TPHV G +TP++TP G TP G KAMAMATP
Sbjct: 350 PSNATP--AITPTNASAMTPN-MTPS--MTPHVTPGHATPMLTPGGSTPIGVKAMAMATP 404
Query: 777 TPGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPA 825
+ G LAAMTPEQ+QAYRWE+EIDERNRP TD+EL+ +FPPGYK+L PPA
Sbjct: 405 SAGALAAMTPEQLQAYRWEKEIDERNRPYTDEELDQIFPPGYKILPPPA 453
Score = 285 (105.4 bits), Expect = 0., Sum P(3) = 0.
Identities = 67/140 (47%), Positives = 91/140 (65%)
Query: 152 NIEAQIRDIQNRKKDVSEGGGEEKQKRVGLGESG-YFDSDIYD-----GGGKFEGYVKSI 205
+IEAQI IQ +K ++++ VGL +SG +FDSD+YD G G++EGY SI
Sbjct: 10 DIEAQISVIQEKKTELAKTTAAAAG--VGLLDSGGFFDSDLYDDDAAKGKGRYEGYNTSI 67
Query: 206 ADDDF-----DYQASFN-QNKRSGYTAPAALLNDIAQSEKDYDPFADRRQKTVAEKEDEY 259
A +D D F KR+ YTAPA++L D+ Q ++D DP ADRR+ T+A++EDEY
Sbjct: 68 AANDAEEVDEDEDDGFPVPQKRTTYTAPASVLKDVTQGKEDVDPMADRRRPTIADREDEY 127
Query: 260 RAIRRRMIISPERVDPFAEG 279
R RR +IISPER DPFA+G
Sbjct: 128 RQKRRHIIISPERADPFADG 147
Score = 230 (86.0 bits), Expect = 1.5e-290, Sum P(4) = 1.5e-290
Identities = 40/55 (72%), Positives = 48/55 (87%)
Query: 279 GHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAGHLAAMTP 333
G LAAMTPEQ+QAYRWE+EIDERNRP TD+EL+ +FPPGYK+L PPAG++ TP
Sbjct: 407 GALAAMTPEQLQAYRWEKEIDERNRPYTDEELDQIFPPGYKILPPPAGYVPLRTP 461
Score = 211 (79.3 bits), Expect = 6.8e-260, Sum P(3) = 6.8e-260
Identities = 47/108 (43%), Positives = 64/108 (59%)
Query: 1 YIPIRTPARKLXXXXXXXXXXXXXFFIQQEDKTAKYMDNQPKG-NLPFLKPEDAQYFDKL 59
Y+P+RTP RKL FFIQ EDK AK+MDNQPKG NLPF+KPEDAQYFDKL
Sbjct: 455 YVPLRTPGRKLMATPTPIAGTPAGFFIQVEDKNAKFMDNQPKGQNLPFMKPEDAQYFDKL 514
Query: 60 LSNGKHCGKTPD-VGSRTYAEVMREQLVRGE---EKEVRKKLQDKAKD 103
L + +P+ + R +++ + G K +++ DKA++
Sbjct: 515 LVDVNEDSLSPEELKERKIMKLLLT-IKNGSPPMRKSALRQITDKARE 561
Score = 189 (71.6 bits), Expect = 0., Sum P(3) = 0.
Identities = 39/77 (50%), Positives = 53/77 (68%)
Query: 67 GKTPDVGSRTYAEVMREQLVRGEEKEVRKKLQDKAKDGTL-KAVPTNGEAKA---APK-- 120
GKTPDVGSRTY ++MREQ+++GEE E+R+++ +K K+GTL K V ++ + APK
Sbjct: 148 GKTPDVGSRTYTDIMREQMLKGEESELRRRILEKTKEGTLVKTVTSSSTSNGDLPAPKDG 207
Query: 121 --KRGRWDQTSDGDVTP 135
KRGRWDQT P
Sbjct: 208 GRKRGRWDQTVSDSFIP 224
Score = 100 (40.3 bits), Expect = 3.4e-269, Sum P(3) = 3.4e-269
Identities = 45/125 (36%), Positives = 53/125 (42%)
Query: 693 TDRAGPGGDLIQETPTPGGVSSKRRSRWDET------P--QATPSGAMTPS--AATPGGM 742
T + GDL P GG ++R RWD+T P ATPS A TP+ TPG
Sbjct: 192 TSSSTSNGDL--PAPKDGG---RKRGRWDQTVSDSFIPAKMATPSSAATPTWEDKTPGDH 246
Query: 743 T-PSTPITPHVGS-TPLMTPSGVTPTGNKAMAMATPTPGHLAAMTPEQIQAYRW-EREID 799
TP H GS TP TP T + A A TPGH + + RW E
Sbjct: 247 RWDETP--GHKGSETPGATPGLGTRIWDATPAHAV-TPGHETPGHEKSARRNRWDETPKT 303
Query: 800 ERNRP 804
ER P
Sbjct: 304 ERETP 308
Score = 86 (35.3 bits), Expect = 1.5e-290, Sum P(4) = 1.5e-290
Identities = 44/183 (24%), Positives = 77/183 (42%)
Query: 436 VDEDSLSPEEAKE-----RKIMKLLLKIKNGTPPMRKAA--LRQITDKAREFGAGPL-FN 487
+DED + E +E K L I P + +R T +A A L
Sbjct: 619 IDEDHYARIEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIP 678
Query: 488 QILPLLMSPTLED---QERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYAR 544
+LP L + Q RH +K++ +I + + P++ ++ +IE L+DE R
Sbjct: 679 SLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLKALVEIIEHGLVDEQQKVR 738
Query: 545 VEGREIISNLAKAA---GLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPF 601
I+ LA+AA G+ + S ++P + + +R + A A+G L+P
Sbjct: 739 TITALAIAALAEAATPYGIESFDSVLKP----LWKGIRTHRGKGLAAFLKAIGY--LIPL 792
Query: 602 LKA 604
+ A
Sbjct: 793 MDA 795
Score = 85 (35.0 bits), Expect = 1.3e-267, Sum P(3) = 1.3e-267
Identities = 28/83 (33%), Positives = 36/83 (43%)
Query: 666 RRNRWDETPKTERETPGHSS--GWAETPKTDRAGPGGDLIQETP------TPGGVSSKRR 717
+R RWD+T ++ P + A TP + PG ETP TPG
Sbjct: 210 KRGRWDQTV-SDSFIPAKMATPSSAATPTWEDKTPGDHRWDETPGHKGSETPGATPGLGT 268
Query: 718 SRWDETPQATPSGAMTPSAATPG 740
WD ATP+ A+TP TPG
Sbjct: 269 RIWD----ATPAHAVTPGHETPG 287
Score = 73 (30.8 bits), Expect = 9.7e-162, Sum P(3) = 9.7e-162
Identities = 41/180 (22%), Positives = 67/180 (37%)
Query: 1142 AIGPH-DVLATLLNNLKVQERQN-RVCTTVAIAIVAETCSPF------TVLPALMNEYRV 1193
AI PH L ++ + V E+Q R T +AIA +AE +P+ +VL L R
Sbjct: 714 AILPHLKALVEIIEHGLVDEQQKVRTITALAIAALAEAATPYGIESFDSVLKPLWKGIRT 773
Query: 1194 PELNVQNGVLKALSFLFEYI-GEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMAL 1252
LKA+ +L + E Y V +L D ++ +K
Sbjct: 774 HRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCA 833
Query: 1253 --GVYG-FGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGL 1309
GV + E+ L H + W + + +D + +G I+ V+ L
Sbjct: 834 TDGVEPQYIKEEILPHFFKFFWNHRMALDRRNYRQLVDTTVEIANKVGASEIINRVVDDL 893
Score = 65 (27.9 bits), Expect = 1.7e-88, Sum P(3) = 1.7e-88
Identities = 48/242 (19%), Positives = 94/242 (38%)
Query: 1066 PPIKDLLPRL-TPILKNRHEKVQENCIDLV-GRIADRGPEYVSAREWMRICFXXXXXXKA 1123
P +LP L +P L+++ + ID V ++ D YV + + +
Sbjct: 566 PLFNQILPLLMSPTLEDQERHLLVKVIDRVLYKLDDLVRPYVHK---ILVVIEPLLIDED 622
Query: 1124 HKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTV 1183
H I + +AKA G +++T+ ++ + R T A A+VA ++
Sbjct: 623 HYARIEGREI--ISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSL 680
Query: 1184 LPALMNEYRVPEL-NVQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQT 1242
LP L + + ++ +K + + +G ++ A+ ++E L+D R
Sbjct: 681 LPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLKALVEIIEHGLVDEQQKVRTI 740
Query: 1243 ACATIKHMALGVYGFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRIL 1302
I +A +G E + +L +W I + AF+ A+ G + L
Sbjct: 741 TALAIAALAEAATPYGIE-SFDSVLKPLWKGIRTHRGKGLAAFLKAI-GYLIPLMDAEYA 798
Query: 1303 QY 1304
Y
Sbjct: 799 NY 800
Score = 64 (27.6 bits), Expect = 4.3e-237, Sum P(2) = 4.3e-237
Identities = 32/131 (24%), Positives = 49/131 (37%)
Query: 615 DETPGHPKPGAETPGATPSTRLWDXXXXXXXXXXXXXXRETPSHDKAQSSIRRNRWDETP 674
DE G P P T P++ L D R D+ + R+ R
Sbjct: 78 DEDDGFPVPQKRTTYTAPASVLKDVTQGKEDVDPMADRRRPTIADR-EDEYRQKRRHIII 136
Query: 675 KTERETPGHSSGWAETPKTDRAGPGGDLIQETPTPGGVSSKRRSRWDETPQATPSGAMTP 734
ER P G +TP + D+++E G S RR ++T + T +T
Sbjct: 137 SPERADPFADGG--KTPDVG-SRTYTDIMREQMLKGEESELRRRILEKTKEGTLVKTVT- 192
Query: 735 SAATPGGMTPS 745
S++T G P+
Sbjct: 193 SSSTSNGDLPA 203
Score = 58 (25.5 bits), Expect = 9.4e-265, Sum P(3) = 9.4e-265
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 606 GVTPAATRWDETPGHPKPG-------AETPGATPS 633
G + +RWDETP + P A TP TPS
Sbjct: 338 GASKRRSRWDETPSNATPAITPTNASAMTPNMTPS 372
Score = 53 (23.7 bits), Expect = 3.2e-264, Sum P(3) = 3.2e-264
Identities = 20/60 (33%), Positives = 23/60 (38%)
Query: 575 DEYVRNTTARAFAVVASALG---IPSLLPFLKAGGVTPAATRWDETP-GHPKPGAETPGA 630
DE N T ASA+ PS+ P + G TP T TP G TP A
Sbjct: 347 DETPSNATPAITPTNASAMTPNMTPSMTPHVTPGHATPMLTPGGSTPIGVKAMAMATPSA 406
Score = 50 (22.7 bits), Expect = 2.6e-159, Sum P(3) = 2.6e-159
Identities = 17/56 (30%), Positives = 21/56 (37%)
Query: 741 GMTPSTPITPHVGSTPLMTPSGVTPTGNKAMAMATPTPGHLAAMTPEQIQAYRWER 796
GMT TP P P +TP + K G +A PE + A W R
Sbjct: 1041 GMTKMTP--PIKDLLPRLTPI-LKNRHEKVQENCIDLVGRIADRGPEYVSAREWMR 1093
Score = 49 (22.3 bits), Expect = 7.9e-90, Sum P(4) = 7.9e-90
Identities = 22/110 (20%), Positives = 51/110 (46%)
Query: 905 INRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAFQEQTTEDVV 964
I +++ +K+ + RK + I GA + +++ L+ L ++Q E +
Sbjct: 533 IMKLLLTIKNGSPPMRKSALRQITDKAREFGAGPLFNQILPLLMSPTL---EDQ--ERHL 587
Query: 965 MLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIA 1014
++ ++ +L V+PY+ +I I L ++ R + ++IS +A
Sbjct: 588 LVKVIDRVLYKLDDLVRPYVHKILVVIEPLLIDEDHYARIEGREIISNLA 637
Score = 48 (22.0 bits), Expect = 1.2e-38, Sum P(4) = 1.2e-38
Identities = 27/128 (21%), Positives = 57/128 (44%)
Query: 433 LVDVDEDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPL 492
LVD + + A E I +++ +K+ RK + + GA + +++
Sbjct: 869 LVDTTVEIANKVGASEI-INRVVDDLKDENEQYRKMVMETVEKIMGNLGAADIDSRLEEQ 927
Query: 493 LMSPTL---EDQ--ERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEG 547
L+ L ++Q E +++ I+ +L V+PY+ +I I L ++ R +
Sbjct: 928 LIDGILYAFQEQTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQA 987
Query: 548 REIISNLA 555
++IS +A
Sbjct: 988 ADLISRIA 995
Score = 48 (22.0 bits), Expect = 1.9e-38, Sum P(3) = 1.9e-38
Identities = 15/71 (21%), Positives = 34/71 (47%)
Query: 489 ILPLLMS----PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYAR 544
+LP LM+ P L Q ++K + + + ++ + Y++ + ++E L+D D R
Sbjct: 1164 VLPALMNEYRVPELNVQNG--VLKSLSFLFEYIGEMGKDYIYAVCPLLEDALMDRDLVHR 1221
Query: 545 VEGREIISNLA 555
I +++
Sbjct: 1222 QTACSAIKHMS 1232
Score = 47 (21.6 bits), Expect = 0., Sum P(3) = 0.
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 118 APKKRGRWDQTSDGDVTP 135
A K+R RWD+T + TP
Sbjct: 339 ASKRRSRWDETPS-NATP 355
Score = 47 (21.6 bits), Expect = 2.4e-38, Sum P(3) = 2.4e-38
Identities = 27/124 (21%), Positives = 56/124 (45%)
Query: 484 PLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHK---ILVVIEPLLIDED 540
P +LP L +P L+++ + ID ++ ++ D YV + + E L + +
Sbjct: 1047 PPIKDLLPRL-TPILKNRHEKVQENCID-LVGRIADRGPEYVSAREWMRICFELLELLKA 1104
Query: 541 YYARVEGREI--ISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSL 598
+ + + +AKA G +++T+ ++ + R T A A+VA + ++
Sbjct: 1105 HKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAESCRPFTV 1164
Query: 599 LPFL 602
LP L
Sbjct: 1165 LPAL 1168
Score = 43 (20.2 bits), Expect = 0., Sum P(3) = 0.
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 111 TNGEAKAAPKKRGRWDQT 128
T G K+A +R RWD+T
Sbjct: 285 TPGHEKSA--RRNRWDET 300
Score = 37 (18.1 bits), Expect = 1.7e-18, Sum P(3) = 1.7e-18
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 279 GHLAAMTPEQIQAYRWER 296
G +A PE + A W R
Sbjct: 1076 GRIADRGPEYVSAREWMR 1093
Score = 37 (18.1 bits), Expect = 1.7e-18, Sum P(3) = 1.7e-18
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 326 GHLAAMTPEQIQAYRWER 343
G +A PE + A W R
Sbjct: 1076 GRIADRGPEYVSAREWMR 1093
>UNIPROTKB|E1C2C3 [details] [associations]
symbol:SF3B1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0005689
"U12-type spliceosomal complex" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR016024 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0003682 GO:GO:0071013 GO:GO:0005689
CTD:23451 KO:K12828 OMA:GVEAQYI InterPro:IPR015016 Pfam:PF08920
GeneTree:ENSGT00390000018393 EMBL:AADN02019806 IPI:IPI00572822
RefSeq:XP_421912.3 Ensembl:ENSGALT00000013044 GeneID:424056
KEGG:gga:424056 Uniprot:E1C2C3
Length = 1301
Score = 2162 (766.1 bits), Expect = 0., Sum P(3) = 0.
Identities = 413/464 (89%), Positives = 435/464 (93%)
Query: 896 ARLVGASEIINRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAF 955
A VGA+EII+R+VDDLKDE EQYRKMVME+IEK M NLGAADID +LEEQLIDGILYAF
Sbjct: 838 ANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAF 897
Query: 956 QEQTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAV 1015
QEQTTED VMLNGFGT+VN LGKRVKPYLPQICGT+LWRLNNKSAKVRQQAADLISR AV
Sbjct: 898 QEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAV 957
Query: 1016 VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL 1075
VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGM KMTPPIKDLLPRL
Sbjct: 958 VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRL 1017
Query: 1076 TPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFXXXXXXKAHKKAIRRATVNT 1135
TPILKNRHEKVQENCIDLVGRIADRG EYVSAREWMRICF KAHKKAIRRATVNT
Sbjct: 1018 TPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNT 1077
Query: 1136 FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE 1195
FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE
Sbjct: 1078 FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE 1137
Query: 1196 LNVQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVY 1255
LNVQNGVLK+LSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTA A ++HM+LGVY
Sbjct: 1138 LNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVY 1197
Query: 1256 GFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHPARK 1315
GFGCED+L HLLNYVWPN+FETSPH++QA M A+EGLRVA+GP R+LQY LQGLFHPARK
Sbjct: 1198 GFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARK 1257
Query: 1316 VRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYELDYVL 1359
VRDVYWKIYNS+YIG QDALI+ YPRI ND KN Y+RYELDY+L
Sbjct: 1258 VRDVYWKIYNSIYIGSQDALIAHYPRIYNDEKNTYIRYELDYIL 1301
Score = 1231 (438.4 bits), Expect = 0., Sum P(3) = 0.
Identities = 241/289 (83%), Positives = 258/289 (89%)
Query: 316 PGYKVLQPPAGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAGYI 375
P + P GH+ +MTPEQ+QA+RWEREIDERNRPL+D+EL+AMFP GYKVL PPAGY+
Sbjct: 360 PAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAGYV 419
Query: 376 PIRTPARKLXXXXXXXXXXXXXFFIQQEDKTAKYMDNQPKGNLPFLKPEDAQYFDKLLVD 435
PIRTPARKL F +Q ED+T K +++QP GNLPFLKP+D QYFDKLLVD
Sbjct: 420 PIRTPARKLTATPTPLGGMTG-FHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLVD 478
Query: 436 VDEDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMS 495
VDE +LSPEE KERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMS
Sbjct: 479 VDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMS 538
Query: 496 PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLA 555
PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLA
Sbjct: 539 PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLA 598
Query: 556 KAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFLKA 604
KAAGLATMISTMRPDIDN+DEYVRNTTARAFAVVASALGIPSLLPFLKA
Sbjct: 599 KAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKA 647
Score = 402 (146.6 bits), Expect = 4.9e-298, Sum P(3) = 4.9e-298
Identities = 89/164 (54%), Positives = 101/164 (61%)
Query: 606 GVTPAATRWDETPGHPKPGAETPGATPSTRLWDXXXXXXXXXXXXXXRETPSHDK----- 660
G TP+ RWDETPG K G+ETPGATP +++WD R+TP H
Sbjct: 223 GHTPSL-RWDETPGRAK-GSETPGATPGSKIWDPTPSHTPAGAATPGRDTPGHATPGHGG 280
Query: 661 AQSSIRRNRWDETPKTERETPGHSSGWAETPKTDRAGPGGDLIQETPTPGGVSSKRRSRW 720
A SS R+NRWDETPKTER+TPGH SGWAETP+TDR GGD I ETPTPG +SKR+SRW
Sbjct: 281 ATSSARKNRWDETPKTERDTPGHGSGWAETPRTDR---GGDSIGETPTPG--ASKRKSRW 335
Query: 721 DETPQATPSGAMTPSAATPGGMTPSTPI----TPHVGSTPLMTP 760
DETP A+ G TP TPG TP TP G MTP
Sbjct: 336 DETP-ASQMGGSTP-VLTPGKTPIGTPAMNMATPTPGHIMSMTP 377
Score = 389 (142.0 bits), Expect = 1.2e-296, Sum P(3) = 1.2e-296
Identities = 109/239 (45%), Positives = 127/239 (53%)
Query: 613 RWDET----PGH-PKP-----GAETPGATPSTRLWDXXXXXXXXXXXXXXRE-------T 655
RWD+T PG PK AETPG TPS R WD T
Sbjct: 197 RWDQTADQTPGATPKKLSSWDQAETPGHTPSLR-WDETPGRAKGSETPGATPGSKIWDPT 255
Query: 656 PSHDKAQSSIRRNRWDETPKTERETPGH----SSG----WAETPKTDRAGPG-GDLIQET 706
PSH A ++ +TP TPGH SS W ETPKT+R PG G ET
Sbjct: 256 PSHTPAGAATPGR---DTPG--HATPGHGGATSSARKNRWDETPKTERDTPGHGSGWAET 310
Query: 707 PTPGGVSSKRRSRWDETPQATPSGAMTPSAATPGGMTPSTPITPHVGSTPLMTPSGVTPT 766
P R R ++ TP TP A+ TP + GSTP++TP G TP
Sbjct: 311 P--------RTDRGGDSIGETP----TPGASKRKSRWDETPASQMGGSTPVLTP-GKTPI 357
Query: 767 GNKAMAMATPTPGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPA 825
G AM MATPTPGH+ +MTPEQ+QA+RWEREIDERNRPL+D+EL+AMFP GYKVL PPA
Sbjct: 358 GTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPA 416
Score = 339 (124.4 bits), Expect = 0., Sum P(3) = 0.
Identities = 89/208 (42%), Positives = 117/208 (56%)
Query: 152 NIEAQIRDIQNRKKDVSEGGGEEKQKRVGLGESGYFDSDIYDGG-GKFEGYVKSIA---- 206
+IEAQIR+IQ +K + E G VGL +GY+D +IY G +F GYV SIA
Sbjct: 10 DIEAQIREIQGKKPALDEAQG------VGLDSTGYYDQEIYGGSDSRFAGYVTSIAATEL 63
Query: 207 -DDDFDYQA-SFNQNKRSGYTAPAALLNDIAQSEKDYDPFADRRQKTVAEKEDEYRAIRR 264
DDD DY + S K+ GY AP ALLNDI QS + YDPFA+ R + +A++EDEY+ RR
Sbjct: 64 EDDDDDYPSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPQKIADREDEYKKHRR 123
Query: 265 RMIISPERVDPFAEGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPP 324
MIISPER+DPFA+G TP+ R ++ R + LT +E E K
Sbjct: 124 MMIISPERLDPFADG---GKTPDPKMNARTYMDV-MREQHLTKEEREIRQQLAEKA---K 176
Query: 325 AGHL-----AAMTPEQIQAYRWEREIDE 347
AG L AA P + RW++ D+
Sbjct: 177 AGELKVVNGAASQPPSKRKRRWDQTADQ 204
Score = 231 (86.4 bits), Expect = 9.1e-270, Sum P(4) = 9.1e-270
Identities = 40/55 (72%), Positives = 49/55 (89%)
Query: 279 GHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAGHLAAMTP 333
GH+ +MTPEQ+QA+RWEREIDERNRPL+D+EL+AMFP GYKVL PPAG++ TP
Sbjct: 370 GHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAGYVPIRTP 424
Score = 176 (67.0 bits), Expect = 7.4e-248, Sum P(3) = 7.4e-248
Identities = 42/108 (38%), Positives = 63/108 (58%)
Query: 1 YIPIRTPARKLXXXXXXXXXXXXXFFIQQEDKTAKYMDNQPKGNLPFLKPEDAQYFDKLL 60
Y+PIRTPARKL F +Q ED+T K +++QP GNLPFLKP+D QYFDKLL
Sbjct: 418 YVPIRTPARKLTATPTPLGGMTG-FHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLL 476
Query: 61 SNGKHCGKTPDVGSRTYAEVMREQL-VRGEEKEVRK----KLQDKAKD 103
+ +P+ + ++M+ L ++ +RK ++ DKA++
Sbjct: 477 VDVDESTLSPE--EQKERKIMKLLLKIKNGTPPMRKAALRQITDKARE 522
Score = 166 (63.5 bits), Expect = 0., Sum P(3) = 0.
Identities = 37/67 (55%), Positives = 47/67 (70%)
Query: 67 GKTPD--VGSRTYAEVMREQLVRGEEKEVRKKLQDKAKDGTLKAVPTNGEAKAAPKKRGR 124
GKTPD + +RTY +VMREQ + EE+E+R++L +KAK G LK V NG A P KR R
Sbjct: 139 GKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGELKVV--NGAASQPPSKRKR 196
Query: 125 -WDQTSD 130
WDQT+D
Sbjct: 197 RWDQTAD 203
Score = 130 (50.8 bits), Expect = 2.7e-269, Sum P(3) = 2.7e-269
Identities = 41/92 (44%), Positives = 46/92 (50%)
Query: 664 SIRRNRWDETP-KTERETPGHSSGW--AETP------KTDRAGPGGDLIQETP--TPGGV 712
S R+ RWD+T +T TP S W AETP + D PG ETP TPG
Sbjct: 192 SKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDET-PGRAKGSETPGATPG-- 248
Query: 713 SSKRRSRWDETPQATPSGAMTPSAATPGGMTP 744
SK WD TP TP+GA TP TPG TP
Sbjct: 249 -SKI---WDPTPSHTPAGAATPGRDTPGHATP 276
Score = 90 (36.7 bits), Expect = 9.1e-270, Sum P(4) = 9.1e-270
Identities = 44/183 (24%), Positives = 77/183 (42%)
Query: 436 VDEDSLSPEEAKE-----RKIMKLLLKIKNGTPPMRKAA--LRQITDKAREFGAGPL-FN 487
+DED + E +E K L I P + +R T +A A L
Sbjct: 580 IDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIP 639
Query: 488 QILPLLMSPTLED---QERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYAR 544
+LP L + Q RH +K++ +I + + P++ ++ +IE L+DE R
Sbjct: 640 SLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVR 699
Query: 545 VEGREIISNLAKAA---GLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPF 601
I+ LA+AA G+ + S ++P + + +R + A A+G L+P
Sbjct: 700 TISALAIAALAEAATPYGIESFDSVLKP----LWKGIRQHRGKGLAAFLKAIGY--LIPL 753
Query: 602 LKA 604
+ A
Sbjct: 754 MDA 756
Score = 85 (35.0 bits), Expect = 1.5e-264, Sum P(3) = 1.5e-264
Identities = 37/86 (43%), Positives = 40/86 (46%)
Query: 714 SKRRSRWDETPQATPSGAMTPS-------AATPGGMTPS-----TPITPHVGSTPLMTPS 761
SKR+ RWD+T TP GA TP A TPG TPS TP TP TP
Sbjct: 192 SKRKRRWDQTADQTP-GA-TPKKLSSWDQAETPGH-TPSLRWDETPGRAKGSETPGATPG 248
Query: 762 GV----TPTGNKAMAMATP---TPGH 780
TP+ A A ATP TPGH
Sbjct: 249 SKIWDPTPSHTPAGA-ATPGRDTPGH 273
Score = 70 (29.7 bits), Expect = 5.8e-263, Sum P(3) = 5.8e-263
Identities = 36/158 (22%), Positives = 52/158 (32%)
Query: 606 GVTPAATRWDETPGHPKPGAETPGATPSTRLWDXXXXXXXXXXXXXXRETPSHDKAQSSI 665
G + +RWDETP + G TP TP TP H + +
Sbjct: 327 GASKRKSRWDETPAS-QMGGSTPVLTPGK-------TPIGTPAMNMATPTPGHIMSMTPE 378
Query: 666 RRNRWDETPKTERETPGHSSGWAETPKTDRAGPGGDLIQETPTPGGVSSKRRSRWDETPQ 725
+ W + ERE + ++ + D P G + P P G R T
Sbjct: 379 QLQAW----RWEREIDERNRPLSDE-ELDAMFPEGYKV--LPPPAGYVPIRTPARKLTAT 431
Query: 726 ATPSGAMTPSAATPGGMTPSTPITPHVGSTPLMTPSGV 763
TP G MT T + G+ P + P +
Sbjct: 432 PTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDI 469
Score = 67 (28.6 bits), Expect = 9.2e-65, Sum P(4) = 9.2e-65
Identities = 33/167 (19%), Positives = 70/167 (41%)
Query: 1139 IAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPEL-N 1197
+AKA G +++T+ ++ + R T A A+VA ++LP L + +
Sbjct: 597 LAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQ 656
Query: 1198 VQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVYGF 1257
++ +K + + +G ++ ++ ++E L+D R + I +A +
Sbjct: 657 ARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPY 716
Query: 1258 GCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQY 1304
G E + +L +W I + + AF+ A+ G + L Y
Sbjct: 717 GIE-SFDSVLKPLWKGIRQHRGKGLAAFLKAI-GYLIPLMDAEYANY 761
Score = 53 (23.7 bits), Expect = 1.4e-26, Sum P(3) = 1.4e-26
Identities = 24/133 (18%), Positives = 56/133 (42%)
Query: 489 ILPLLMS----PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYAR 544
+LP LM+ P L Q ++K + + + ++ + Y++ + ++E L+D D R
Sbjct: 1125 VLPALMNEYRVPELNVQNG--VLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR 1182
Query: 545 VEGREIISNLAKAA-------GLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPS 597
++ +++ L +++ + P++ +V A + A+G
Sbjct: 1183 QTASAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCR 1242
Query: 598 LLPFLKAGGVTPA 610
+L + G PA
Sbjct: 1243 MLQYCLQGLFHPA 1255
Score = 52 (23.4 bits), Expect = 8.5e-163, Sum P(3) = 8.5e-163
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 915 ENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLID 949
+ YR++V ++E + +GAA+I SR+ + L D
Sbjct: 823 DRRNYRQLVDTTVELA-NKVGAAEIISRIVDDLKD 856
Score = 52 (23.4 bits), Expect = 5.2e-63, Sum P(3) = 5.2e-63
Identities = 16/71 (22%), Positives = 34/71 (47%)
Query: 1183 VLPALMNEYRVPELNVQNG--VLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR 1240
+LP LM+ P L Q ++K + + + ++ + Y++ + ++E L+D D R
Sbjct: 532 ILPLLMS----PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYAR 587
Query: 1241 QTACATIKHMA 1251
I ++A
Sbjct: 588 VEGREIISNLA 598
Score = 50 (22.7 bits), Expect = 9.2e-65, Sum P(4) = 9.2e-65
Identities = 23/110 (20%), Positives = 50/110 (45%)
Query: 905 INRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAFQEQTTEDVV 964
I +++ +K+ RK + I GA + +++ L+ L ++Q E +
Sbjct: 494 IMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTL---EDQ--ERHL 548
Query: 965 MLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIA 1014
++ I+ +L V+PY+ +I I L ++ R + ++IS +A
Sbjct: 549 LVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLA 598
Score = 50 (22.7 bits), Expect = 2.8e-26, Sum P(3) = 2.8e-26
Identities = 30/139 (21%), Positives = 60/139 (43%)
Query: 469 ALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHK- 527
AL+ I + P +LP L +P L+++ + ID ++ ++ D YV
Sbjct: 993 ALKAIVNVIGMHKMTPPIKDLLPRL-TPILKNRHEKVQENCID-LVGRIADRGAEYVSAR 1050
Query: 528 --ILVVIEPLLIDEDYYARVEGREI--ISNLAKAAGLATMISTMRPDIDNIDEYVRNTTA 583
+ + E L + + + + + +AKA G +++T+ ++ + R T
Sbjct: 1051 EWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTT 1110
Query: 584 RAFAVVASALGIPSLLPFL 602
A A+VA ++LP L
Sbjct: 1111 VAIAIVAETCSPFTVLPAL 1129
Score = 45 (20.9 bits), Expect = 0., Sum P(3) = 0.
Identities = 9/19 (47%), Positives = 9/19 (47%)
Query: 117 AAPKKRGRWDQTSDGDVTP 135
A PKK WDQ TP
Sbjct: 208 ATPKKLSSWDQAETPGHTP 226
Score = 45 (20.9 bits), Expect = 0., Sum P(3) = 0.
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 99 DKAKDGTLKAVPTNGEAKAAPKKRGRWDQT 128
D+ D ++ PT G A K++ RWD+T
Sbjct: 314 DRGGD-SIGETPTPG----ASKRKSRWDET 338
Score = 45 (20.9 bits), Expect = 5.1e-265, Sum P(4) = 5.1e-265
Identities = 26/125 (20%), Positives = 56/125 (44%)
Query: 418 LPFLKPEDAQYFDK--LLVDVDEDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQ--I 473
+P + E A Y+ + +L+ + E SP+E ++ ++K++ K GT + ++ +
Sbjct: 751 IPLMDAEYANYYTREVMLILIREFQ-SPDEEMKKIVLKVV-KQCCGTDGVEANYIKTEIL 808
Query: 474 TDKAREFGAG--PLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVV 531
+ F L + L+ T+E + ++I RI+ L D Y ++
Sbjct: 809 PPFFKHFWQHRMALDRRNYRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMET 868
Query: 532 IEPLL 536
IE ++
Sbjct: 869 IEKIM 873
Score = 45 (20.9 bits), Expect = 9.2e-26, Sum P(3) = 9.2e-26
Identities = 26/128 (20%), Positives = 55/128 (42%)
Query: 433 LVDVDEDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPL 492
LVD + + A E I +++ +K+ RK + I GA + +++
Sbjct: 830 LVDTTVELANKVGAAEI-ISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQ 888
Query: 493 LMSPTL---EDQ--ERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEG 547
L+ L ++Q E +++ ++ L V+PY+ +I + L ++ R +
Sbjct: 889 LIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQA 948
Query: 548 REIISNLA 555
++IS A
Sbjct: 949 ADLISRTA 956
Score = 40 (19.1 bits), Expect = 8.6e-260, Sum P(3) = 8.6e-260
Identities = 14/34 (41%), Positives = 16/34 (47%)
Query: 600 PFLKAGGVTPAATRWDETP-GHPKPGAETPGATP 632
P + GG TP T +TP G P TP TP
Sbjct: 339 PASQMGGSTPVLTP-GKTPIGTPAMNMATP--TP 369
Score = 38 (18.4 bits), Expect = 1.5e-225, Sum P(2) = 1.5e-225
Identities = 7/21 (33%), Positives = 16/21 (76%)
Query: 909 VDDLKDENEQYRKMVMESIEK 929
+ D +DE +++R+M++ S E+
Sbjct: 111 IADREDEYKKHRRMMIISPER 131
Score = 38 (18.4 bits), Expect = 2.6e-161, Sum P(3) = 2.6e-161
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 1128 IRRATVNTFGYIAKAIGPHDVLATL 1152
+R T F +A A+G +L L
Sbjct: 621 VRNTTARAFAVVASALGIPSLLPFL 645
>UNIPROTKB|O75533 [details] [associations]
symbol:SF3B1 "Splicing factor 3B subunit 1" species:9606
"Homo sapiens" [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=NAS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;NAS;TAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=NAS] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005689 "U12-type
spliceosomal complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380
"RNA splicing" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] Reactome:REACT_71 InterPro:IPR016024 EMBL:AF054284
GO:GO:0005654 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0009952 GO:GO:0016607 Reactome:REACT_1675
GO:GO:0003682 EMBL:AC010746 GO:GO:0000398 GO:GO:0071013
GO:GO:0005689 PDB:2F9D PDB:2F9J PDB:2FHO PDB:3LQV PDBsum:2F9D
PDBsum:2F9J PDBsum:2FHO PDBsum:3LQV EMBL:AF070540 IPI:IPI00026089
RefSeq:NP_036565.2 UniGene:Hs.632554 PDB:2PEH PDBsum:2PEH
ProteinModelPortal:O75533 SMR:O75533 DIP:DIP-29411N IntAct:O75533
MINT:MINT-1185911 STRING:O75533 PhosphoSite:O75533 PaxDb:O75533
PRIDE:O75533 Ensembl:ENST00000335508 GeneID:23451 KEGG:hsa:23451
UCSC:uc002uue.3 CTD:23451 GeneCards:GC02M198256 HGNC:HGNC:10768
MIM:605590 neXtProt:NX_O75533 PharmGKB:PA35686 eggNOG:COG5181
HOGENOM:HOG000166737 HOVERGEN:HBG079173 InParanoid:O75533 KO:K12828
OMA:GVEAQYI OrthoDB:EOG4RJG0Q PhylomeDB:O75533 ChEMBL:CHEMBL1229013
EvolutionaryTrace:O75533 GenomeRNAi:23451 NextBio:45735
PMAP-CutDB:O75533 ArrayExpress:O75533 Bgee:O75533 CleanEx:HS_SF3B1
Genevestigator:O75533 GermOnline:ENSG00000115524 InterPro:IPR015016
Pfam:PF08920 Uniprot:O75533
Length = 1304
Score = 2161 (765.8 bits), Expect = 0., Sum P(3) = 0.
Identities = 413/464 (89%), Positives = 435/464 (93%)
Query: 896 ARLVGASEIINRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAF 955
A VGA+EII+R+VDDLKDE EQYRKMVME+IEK M NLGAADID +LEEQLIDGILYAF
Sbjct: 841 ANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAF 900
Query: 956 QEQTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAV 1015
QEQTTED VMLNGFGT+VN LGKRVKPYLPQICGT+LWRLNNKSAKVRQQAADLISR AV
Sbjct: 901 QEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAV 960
Query: 1016 VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL 1075
VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGM KMTPPIKDLLPRL
Sbjct: 961 VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRL 1020
Query: 1076 TPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFXXXXXXKAHKKAIRRATVNT 1135
TPILKNRHEKVQENCIDLVGRIADRG EYVSAREWMRICF KAHKKAIRRATVNT
Sbjct: 1021 TPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNT 1080
Query: 1136 FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE 1195
FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE
Sbjct: 1081 FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE 1140
Query: 1196 LNVQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVY 1255
LNVQNGVLK+LSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTA A ++HM+LGVY
Sbjct: 1141 LNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVY 1200
Query: 1256 GFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHPARK 1315
GFGCED+L HLLNYVWPN+FETSPH++QA M A+EGLRVA+GP R+LQY LQGLFHPARK
Sbjct: 1201 GFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARK 1260
Query: 1316 VRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYELDYVL 1359
VRDVYWKIYNS+YIG QDALI+ YPRI ND KN Y+RYELDY+L
Sbjct: 1261 VRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYIL 1304
Score = 1231 (438.4 bits), Expect = 0., Sum P(3) = 0.
Identities = 241/289 (83%), Positives = 258/289 (89%)
Query: 316 PGYKVLQPPAGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAGYI 375
P + P GH+ +MTPEQ+QA+RWEREIDERNRPL+D+EL+AMFP GYKVL PPAGY+
Sbjct: 363 PAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAGYV 422
Query: 376 PIRTPARKLXXXXXXXXXXXXXFFIQQEDKTAKYMDNQPKGNLPFLKPEDAQYFDKLLVD 435
PIRTPARKL F +Q ED+T K +++QP GNLPFLKP+D QYFDKLLVD
Sbjct: 423 PIRTPARKLTATPTPLGGMTG-FHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLVD 481
Query: 436 VDEDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMS 495
VDE +LSPEE KERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMS
Sbjct: 482 VDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMS 541
Query: 496 PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLA 555
PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLA
Sbjct: 542 PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLA 601
Query: 556 KAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFLKA 604
KAAGLATMISTMRPDIDN+DEYVRNTTARAFAVVASALGIPSLLPFLKA
Sbjct: 602 KAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKA 650
Score = 397 (144.8 bits), Expect = 4.4e-297, Sum P(3) = 4.4e-297
Identities = 89/165 (53%), Positives = 100/165 (60%)
Query: 606 GVTPAATRWDETPGHPKPGAETPGATPSTRLWDXXXXXXXXXXXXXXR------ETPSHD 659
G TP+ RWDETPG K G+ETPGATP +++WD R TP H
Sbjct: 225 GHTPSL-RWDETPGRAK-GSETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHG 282
Query: 660 KAQSSIRRNRWDETPKTERETPGHSSGWAETPKTDRAGPGGDLIQETPTPGGVSSKRRSR 719
A SS R+NRWDETPKTER+TPGH SGWAETP+TDR GGD I ETPTPG +SKR+SR
Sbjct: 283 GATSSARKNRWDETPKTERDTPGHGSGWAETPRTDR---GGDSIGETPTPG--ASKRKSR 337
Query: 720 WDETPQATPSGAMTPSAATPGGMTPSTPI----TPHVGSTPLMTP 760
WDETP A+ G TP TPG TP TP G MTP
Sbjct: 338 WDETP-ASQMGGSTP-VLTPGKTPIGTPAMNMATPTPGHIMSMTP 380
Score = 393 (143.4 bits), Expect = 1.2e-296, Sum P(3) = 1.2e-296
Identities = 111/239 (46%), Positives = 128/239 (53%)
Query: 613 RWDET----PGH-PKP-----GAETPGATPSTRLWDXXXXXXXXXXXXXXRE-------T 655
RWD+T PG PK AETPG TPS R WD T
Sbjct: 199 RWDQTADQTPGATPKKLSSWDQAETPGHTPSLR-WDETPGRAKGSETPGATPGSKIWDPT 257
Query: 656 PSHDKAQSSIRRNRWDETPKTERETPGH----SSG----WAETPKTDRAGPG-GDLIQET 706
PSH A ++ R D TP TPGH SS W ETPKT+R PG G ET
Sbjct: 258 PSHTPAGAATP-GRGD-TPG--HATPGHGGATSSARKNRWDETPKTERDTPGHGSGWAET 313
Query: 707 PTPGGVSSKRRSRWDETPQATPSGAMTPSAATPGGMTPSTPITPHVGSTPLMTPSGVTPT 766
P R R ++ TP TP A+ TP + GSTP++TP G TP
Sbjct: 314 P--------RTDRGGDSIGETP----TPGASKRKSRWDETPASQMGGSTPVLTP-GKTPI 360
Query: 767 GNKAMAMATPTPGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPA 825
G AM MATPTPGH+ +MTPEQ+QA+RWEREIDERNRPL+D+EL+AMFP GYKVL PPA
Sbjct: 361 GTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPA 419
Score = 336 (123.3 bits), Expect = 0., Sum P(3) = 0.
Identities = 89/210 (42%), Positives = 117/210 (55%)
Query: 152 NIEAQIRDIQNRKKDVSEGGGEEKQKRVGLGESGYFDSDIYDGG-GKFEGYVKSIA---- 206
+IEAQIR+IQ +K + E G VGL +GY+D +IY G +F GYV SIA
Sbjct: 10 DIEAQIREIQGKKAALDEAQG------VGLDSTGYYDQEIYGGSDSRFAGYVTSIAATEL 63
Query: 207 -DDDFDYQASFNQ--NKRSGYTAPAALLNDIAQSEKDYDPFADRRQKTVAEKEDEYRAIR 263
DDD DY +S + K+ GY AP ALLNDI QS + YDPFA+ R +A++EDEY+ R
Sbjct: 64 EDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYKKHR 123
Query: 264 RRMIISPERVDPFAEGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQP 323
R MIISPER+DPFA+G TP+ R ++ R + LT +E E K
Sbjct: 124 RTMIISPERLDPFADG---GKTPDPKMNARTYMDV-MREQHLTKEEREIRQQLAEKA--- 176
Query: 324 PAGHL------AAMTPEQIQAYRWEREIDE 347
AG L AA P + RW++ D+
Sbjct: 177 KAGELKVVNGAAASQPPSKRKRRWDQTADQ 206
Score = 231 (86.4 bits), Expect = 1.9e-269, Sum P(4) = 1.9e-269
Identities = 40/55 (72%), Positives = 49/55 (89%)
Query: 279 GHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAGHLAAMTP 333
GH+ +MTPEQ+QA+RWEREIDERNRPL+D+EL+AMFP GYKVL PPAG++ TP
Sbjct: 373 GHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAGYVPIRTP 427
Score = 176 (67.0 bits), Expect = 9.5e-248, Sum P(3) = 9.5e-248
Identities = 42/108 (38%), Positives = 63/108 (58%)
Query: 1 YIPIRTPARKLXXXXXXXXXXXXXFFIQQEDKTAKYMDNQPKGNLPFLKPEDAQYFDKLL 60
Y+PIRTPARKL F +Q ED+T K +++QP GNLPFLKP+D QYFDKLL
Sbjct: 421 YVPIRTPARKLTATPTPLGGMTG-FHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLL 479
Query: 61 SNGKHCGKTPDVGSRTYAEVMREQL-VRGEEKEVRK----KLQDKAKD 103
+ +P+ + ++M+ L ++ +RK ++ DKA++
Sbjct: 480 VDVDESTLSPE--EQKERKIMKLLLKIKNGTPPMRKAALRQITDKARE 525
Score = 164 (62.8 bits), Expect = 0., Sum P(3) = 0.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 67 GKTPD--VGSRTYAEVMREQLVRGEEKEVRKKLQDKAKDGTLKAVPTNGEAKAAP--KKR 122
GKTPD + +RTY +VMREQ + EE+E+R++L +KAK G LK V NG A + P K++
Sbjct: 140 GKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGELKVV--NGAAASQPPSKRK 197
Query: 123 GRWDQTSD 130
RWDQT+D
Sbjct: 198 RRWDQTAD 205
Score = 123 (48.4 bits), Expect = 3.9e-268, Sum P(3) = 3.9e-268
Identities = 41/93 (44%), Positives = 46/93 (49%)
Query: 664 SIRRNRWDETP-KTERETPGHSSGW--AETP------KTDRAGPGGDLIQETP--TPGGV 712
S R+ RWD+T +T TP S W AETP + D PG ETP TPG
Sbjct: 194 SKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDET-PGRAKGSETPGATPG-- 250
Query: 713 SSKRRSRWDETPQATPSGAMTPSAA-TPGGMTP 744
SK WD TP TP+GA TP TPG TP
Sbjct: 251 -SKI---WDPTPSHTPAGAATPGRGDTPGHATP 279
Score = 90 (36.7 bits), Expect = 1.9e-269, Sum P(4) = 1.9e-269
Identities = 44/183 (24%), Positives = 77/183 (42%)
Query: 436 VDEDSLSPEEAKE-----RKIMKLLLKIKNGTPPMRKAA--LRQITDKAREFGAGPL-FN 487
+DED + E +E K L I P + +R T +A A L
Sbjct: 583 IDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIP 642
Query: 488 QILPLLMSPTLED---QERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYAR 544
+LP L + Q RH +K++ +I + + P++ ++ +IE L+DE R
Sbjct: 643 SLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVR 702
Query: 545 VEGREIISNLAKAA---GLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPF 601
I+ LA+AA G+ + S ++P + + +R + A A+G L+P
Sbjct: 703 TISALAIAALAEAATPYGIESFDSVLKP----LWKGIRQHRGKGLAAFLKAIGY--LIPL 756
Query: 602 LKA 604
+ A
Sbjct: 757 MDA 759
Score = 85 (35.0 bits), Expect = 4.0e-264, Sum P(3) = 4.0e-264
Identities = 26/77 (33%), Positives = 32/77 (41%)
Query: 714 SKRRSRWDETPQATPSGAMTPSAATPGGMTPSTPITPHV--GSTPLMTPSGVTPTGNKAM 771
SKR+ RWD+T TP GA TP + + TP + TP TP
Sbjct: 194 SKRKRRWDQTADQTP-GA-TPKKLSSWDQAETPGHTPSLRWDETPGRAKGSETPGATPGS 251
Query: 772 AMATPTPGHL--AAMTP 786
+ PTP H A TP
Sbjct: 252 KIWDPTPSHTPAGAATP 268
Score = 70 (29.7 bits), Expect = 1.5e-262, Sum P(3) = 1.5e-262
Identities = 36/158 (22%), Positives = 52/158 (32%)
Query: 606 GVTPAATRWDETPGHPKPGAETPGATPSTRLWDXXXXXXXXXXXXXXRETPSHDKAQSSI 665
G + +RWDETP + G TP TP TP H + +
Sbjct: 330 GASKRKSRWDETPAS-QMGGSTPVLTPGK-------TPIGTPAMNMATPTPGHIMSMTPE 381
Query: 666 RRNRWDETPKTERETPGHSSGWAETPKTDRAGPGGDLIQETPTPGGVSSKRRSRWDETPQ 725
+ W + ERE + ++ + D P G + P P G R T
Sbjct: 382 QLQAW----RWEREIDERNRPLSDE-ELDAMFPEGYKV--LPPPAGYVPIRTPARKLTAT 434
Query: 726 ATPSGAMTPSAATPGGMTPSTPITPHVGSTPLMTPSGV 763
TP G MT T + G+ P + P +
Sbjct: 435 PTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDI 472
Score = 67 (28.6 bits), Expect = 6.7e-64, Sum P(4) = 6.7e-64
Identities = 33/167 (19%), Positives = 70/167 (41%)
Query: 1139 IAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPEL-N 1197
+AKA G +++T+ ++ + R T A A+VA ++LP L + +
Sbjct: 600 LAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQ 659
Query: 1198 VQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVYGF 1257
++ +K + + +G ++ ++ ++E L+D R + I +A +
Sbjct: 660 ARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPY 719
Query: 1258 GCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQY 1304
G E + +L +W I + + AF+ A+ G + L Y
Sbjct: 720 GIE-SFDSVLKPLWKGIRQHRGKGLAAFLKAI-GYLIPLMDAEYANY 764
Score = 53 (23.7 bits), Expect = 2.2e-26, Sum P(3) = 2.2e-26
Identities = 24/133 (18%), Positives = 56/133 (42%)
Query: 489 ILPLLMS----PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYAR 544
+LP LM+ P L Q ++K + + + ++ + Y++ + ++E L+D D R
Sbjct: 1128 VLPALMNEYRVPELNVQNG--VLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR 1185
Query: 545 VEGREIISNLAKAA-------GLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPS 597
++ +++ L +++ + P++ +V A + A+G
Sbjct: 1186 QTASAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCR 1245
Query: 598 LLPFLKAGGVTPA 610
+L + G PA
Sbjct: 1246 MLQYCLQGLFHPA 1258
Score = 52 (23.4 bits), Expect = 1.8e-162, Sum P(3) = 1.8e-162
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 915 ENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLID 949
+ YR++V ++E + +GAA+I SR+ + L D
Sbjct: 826 DRRNYRQLVDTTVELA-NKVGAAEIISRIVDDLKD 859
Score = 52 (23.4 bits), Expect = 3.8e-62, Sum P(3) = 3.8e-62
Identities = 16/71 (22%), Positives = 34/71 (47%)
Query: 1183 VLPALMNEYRVPELNVQNG--VLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR 1240
+LP LM+ P L Q ++K + + + ++ + Y++ + ++E L+D D R
Sbjct: 535 ILPLLMS----PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYAR 590
Query: 1241 QTACATIKHMA 1251
I ++A
Sbjct: 591 VEGREIISNLA 601
Score = 50 (22.7 bits), Expect = 6.7e-64, Sum P(4) = 6.7e-64
Identities = 23/110 (20%), Positives = 50/110 (45%)
Query: 905 INRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAFQEQTTEDVV 964
I +++ +K+ RK + I GA + +++ L+ L ++Q E +
Sbjct: 497 IMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTL---EDQ--ERHL 551
Query: 965 MLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIA 1014
++ I+ +L V+PY+ +I I L ++ R + ++IS +A
Sbjct: 552 LVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLA 601
Score = 50 (22.7 bits), Expect = 4.5e-26, Sum P(3) = 4.5e-26
Identities = 30/139 (21%), Positives = 60/139 (43%)
Query: 469 ALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHK- 527
AL+ I + P +LP L +P L+++ + ID ++ ++ D YV
Sbjct: 996 ALKAIVNVIGMHKMTPPIKDLLPRL-TPILKNRHEKVQENCID-LVGRIADRGAEYVSAR 1053
Query: 528 --ILVVIEPLLIDEDYYARVEGREI--ISNLAKAAGLATMISTMRPDIDNIDEYVRNTTA 583
+ + E L + + + + + +AKA G +++T+ ++ + R T
Sbjct: 1054 EWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTT 1113
Query: 584 RAFAVVASALGIPSLLPFL 602
A A+VA ++LP L
Sbjct: 1114 VAIAIVAETCSPFTVLPAL 1132
Score = 45 (20.9 bits), Expect = 0., Sum P(3) = 0.
Identities = 9/19 (47%), Positives = 9/19 (47%)
Query: 117 AAPKKRGRWDQTSDGDVTP 135
A PKK WDQ TP
Sbjct: 210 ATPKKLSSWDQAETPGHTP 228
Score = 45 (20.9 bits), Expect = 0., Sum P(3) = 0.
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 99 DKAKDGTLKAVPTNGEAKAAPKKRGRWDQT 128
D+ D ++ PT G A K++ RWD+T
Sbjct: 317 DRGGD-SIGETPTPG----ASKRKSRWDET 341
Score = 45 (20.9 bits), Expect = 1.1e-264, Sum P(4) = 1.1e-264
Identities = 26/125 (20%), Positives = 56/125 (44%)
Query: 418 LPFLKPEDAQYFDK--LLVDVDEDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQ--I 473
+P + E A Y+ + +L+ + E SP+E ++ ++K++ K GT + ++ +
Sbjct: 754 IPLMDAEYANYYTREVMLILIREFQ-SPDEEMKKIVLKVV-KQCCGTDGVEANYIKTEIL 811
Query: 474 TDKAREFGAG--PLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVV 531
+ F L + L+ T+E + ++I RI+ L D Y ++
Sbjct: 812 PPFFKHFWQHRMALDRRNYRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMET 871
Query: 532 IEPLL 536
IE ++
Sbjct: 872 IEKIM 876
Score = 45 (20.9 bits), Expect = 1.5e-25, Sum P(3) = 1.5e-25
Identities = 26/128 (20%), Positives = 55/128 (42%)
Query: 433 LVDVDEDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPL 492
LVD + + A E I +++ +K+ RK + I GA + +++
Sbjct: 833 LVDTTVELANKVGAAEI-ISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQ 891
Query: 493 LMSPTL---EDQ--ERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEG 547
L+ L ++Q E +++ ++ L V+PY+ +I + L ++ R +
Sbjct: 892 LIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQA 951
Query: 548 REIISNLA 555
++IS A
Sbjct: 952 ADLISRTA 959
Score = 40 (19.1 bits), Expect = 2.3e-259, Sum P(3) = 2.3e-259
Identities = 14/34 (41%), Positives = 16/34 (47%)
Query: 600 PFLKAGGVTPAATRWDETP-GHPKPGAETPGATP 632
P + GG TP T +TP G P TP TP
Sbjct: 342 PASQMGGSTPVLTP-GKTPIGTPAMNMATP--TP 372
Score = 38 (18.4 bits), Expect = 5.3e-161, Sum P(3) = 5.3e-161
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 1128 IRRATVNTFGYIAKAIGPHDVLATL 1152
+R T F +A A+G +L L
Sbjct: 624 VRNTTARAFAVVASALGIPSLLPFL 648
>UNIPROTKB|G3V7T6 [details] [associations]
symbol:Sf3b1 "Splicing factor 3b, subunit 1, isoform CRA_b"
species:10116 "Rattus norvegicus" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] InterPro:IPR016024 RGD:620148
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:CH473965
CTD:23451 KO:K12828 OMA:GVEAQYI InterPro:IPR015016 Pfam:PF08920
GeneTree:ENSGT00390000018393 RefSeq:NP_445878.1 UniGene:Rn.198843
ProteinModelPortal:G3V7T6 SMR:G3V7T6 PRIDE:G3V7T6
Ensembl:ENSRNOT00000019126 GeneID:84486 KEGG:rno:84486
NextBio:617020 Uniprot:G3V7T6
Length = 1304
Score = 2161 (765.8 bits), Expect = 0., Sum P(3) = 0.
Identities = 413/464 (89%), Positives = 435/464 (93%)
Query: 896 ARLVGASEIINRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAF 955
A VGA+EII+R+VDDLKDE EQYRKMVME+IEK M NLGAADID +LEEQLIDGILYAF
Sbjct: 841 ANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAF 900
Query: 956 QEQTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAV 1015
QEQTTED VMLNGFGT+VN LGKRVKPYLPQICGT+LWRLNNKSAKVRQQAADLISR AV
Sbjct: 901 QEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAV 960
Query: 1016 VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL 1075
VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGM KMTPPIKDLLPRL
Sbjct: 961 VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRL 1020
Query: 1076 TPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFXXXXXXKAHKKAIRRATVNT 1135
TPILKNRHEKVQENCIDLVGRIADRG EYVSAREWMRICF KAHKKAIRRATVNT
Sbjct: 1021 TPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNT 1080
Query: 1136 FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE 1195
FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE
Sbjct: 1081 FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE 1140
Query: 1196 LNVQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVY 1255
LNVQNGVLK+LSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTA A ++HM+LGVY
Sbjct: 1141 LNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVY 1200
Query: 1256 GFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHPARK 1315
GFGCED+L HLLNYVWPN+FETSPH++QA M A+EGLRVA+GP R+LQY LQGLFHPARK
Sbjct: 1201 GFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARK 1260
Query: 1316 VRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYELDYVL 1359
VRDVYWKIYNS+YIG QDALI+ YPRI ND KN Y+RYELDY+L
Sbjct: 1261 VRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYIL 1304
Score = 1231 (438.4 bits), Expect = 0., Sum P(3) = 0.
Identities = 241/289 (83%), Positives = 258/289 (89%)
Query: 316 PGYKVLQPPAGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAGYI 375
P + P GH+ +MTPEQ+QA+RWEREIDERNRPL+D+EL+AMFP GYKVL PPAGY+
Sbjct: 363 PAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAGYV 422
Query: 376 PIRTPARKLXXXXXXXXXXXXXFFIQQEDKTAKYMDNQPKGNLPFLKPEDAQYFDKLLVD 435
PIRTPARKL F +Q ED+T K +++QP GNLPFLKP+D QYFDKLLVD
Sbjct: 423 PIRTPARKLTATPTPLGGMTG-FHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLVD 481
Query: 436 VDEDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMS 495
VDE +LSPEE KERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMS
Sbjct: 482 VDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMS 541
Query: 496 PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLA 555
PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLA
Sbjct: 542 PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLA 601
Query: 556 KAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFLKA 604
KAAGLATMISTMRPDIDN+DEYVRNTTARAFAVVASALGIPSLLPFLKA
Sbjct: 602 KAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKA 650
Score = 397 (144.8 bits), Expect = 4.4e-297, Sum P(3) = 4.4e-297
Identities = 89/165 (53%), Positives = 100/165 (60%)
Query: 606 GVTPAATRWDETPGHPKPGAETPGATPSTRLWDXXXXXXXXXXXXXXR------ETPSHD 659
G TP+ RWDETPG K G+ETPGATP +++WD R TP H
Sbjct: 225 GHTPSL-RWDETPGRAK-GSETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHG 282
Query: 660 KAQSSIRRNRWDETPKTERETPGHSSGWAETPKTDRAGPGGDLIQETPTPGGVSSKRRSR 719
A SS R+NRWDETPKTER+TPGH SGWAETP+TDR GGD I ETPTPG +SKR+SR
Sbjct: 283 GATSSARKNRWDETPKTERDTPGHGSGWAETPRTDR---GGDSIGETPTPG--ASKRKSR 337
Query: 720 WDETPQATPSGAMTPSAATPGGMTPSTPI----TPHVGSTPLMTP 760
WDETP A+ G TP TPG TP TP G MTP
Sbjct: 338 WDETP-ASQMGGSTP-VLTPGKTPIGTPAMNMATPTPGHIMSMTP 380
Score = 393 (143.4 bits), Expect = 1.2e-296, Sum P(3) = 1.2e-296
Identities = 111/239 (46%), Positives = 128/239 (53%)
Query: 613 RWDET----PGH-PKP-----GAETPGATPSTRLWDXXXXXXXXXXXXXXRE-------T 655
RWD+T PG PK AETPG TPS R WD T
Sbjct: 199 RWDQTADQTPGATPKKLSSWDQAETPGHTPSLR-WDETPGRAKGSETPGATPGSKIWDPT 257
Query: 656 PSHDKAQSSIRRNRWDETPKTERETPGH----SSG----WAETPKTDRAGPG-GDLIQET 706
PSH A ++ R D TP TPGH SS W ETPKT+R PG G ET
Sbjct: 258 PSHTPAGAATP-GRGD-TPG--HATPGHGGATSSARKNRWDETPKTERDTPGHGSGWAET 313
Query: 707 PTPGGVSSKRRSRWDETPQATPSGAMTPSAATPGGMTPSTPITPHVGSTPLMTPSGVTPT 766
P R R ++ TP TP A+ TP + GSTP++TP G TP
Sbjct: 314 P--------RTDRGGDSIGETP----TPGASKRKSRWDETPASQMGGSTPVLTP-GKTPI 360
Query: 767 GNKAMAMATPTPGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPA 825
G AM MATPTPGH+ +MTPEQ+QA+RWEREIDERNRPL+D+EL+AMFP GYKVL PPA
Sbjct: 361 GTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPA 419
Score = 336 (123.3 bits), Expect = 0., Sum P(3) = 0.
Identities = 89/210 (42%), Positives = 117/210 (55%)
Query: 152 NIEAQIRDIQNRKKDVSEGGGEEKQKRVGLGESGYFDSDIYDGG-GKFEGYVKSIA---- 206
+IEAQIR+IQ +K + E G VGL +GY+D +IY G +F GYV SIA
Sbjct: 10 DIEAQIREIQGKKAALDEAQG------VGLDSTGYYDQEIYGGSDSRFAGYVTSIAATEL 63
Query: 207 -DDDFDYQASFNQ--NKRSGYTAPAALLNDIAQSEKDYDPFADRRQKTVAEKEDEYRAIR 263
DDD DY +S + K+ GY AP ALLNDI QS + YDPFA+ R +A++EDEY+ R
Sbjct: 64 EDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYKKHR 123
Query: 264 RRMIISPERVDPFAEGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQP 323
R MIISPER+DPFA+G TP+ R ++ R + LT +E E K
Sbjct: 124 RTMIISPERLDPFADG---GKTPDPKMNARTYMDV-MREQHLTKEEREIRQQLAEKA--- 176
Query: 324 PAGHL------AAMTPEQIQAYRWEREIDE 347
AG L AA P + RW++ D+
Sbjct: 177 KAGELKVVNGAAASQPPSKRKRRWDQTADQ 206
Score = 231 (86.4 bits), Expect = 1.9e-269, Sum P(4) = 1.9e-269
Identities = 40/55 (72%), Positives = 49/55 (89%)
Query: 279 GHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAGHLAAMTP 333
GH+ +MTPEQ+QA+RWEREIDERNRPL+D+EL+AMFP GYKVL PPAG++ TP
Sbjct: 373 GHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAGYVPIRTP 427
Score = 176 (67.0 bits), Expect = 9.5e-248, Sum P(3) = 9.5e-248
Identities = 42/108 (38%), Positives = 63/108 (58%)
Query: 1 YIPIRTPARKLXXXXXXXXXXXXXFFIQQEDKTAKYMDNQPKGNLPFLKPEDAQYFDKLL 60
Y+PIRTPARKL F +Q ED+T K +++QP GNLPFLKP+D QYFDKLL
Sbjct: 421 YVPIRTPARKLTATPTPLGGMTG-FHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLL 479
Query: 61 SNGKHCGKTPDVGSRTYAEVMREQL-VRGEEKEVRK----KLQDKAKD 103
+ +P+ + ++M+ L ++ +RK ++ DKA++
Sbjct: 480 VDVDESTLSPE--EQKERKIMKLLLKIKNGTPPMRKAALRQITDKARE 525
Score = 164 (62.8 bits), Expect = 0., Sum P(3) = 0.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 67 GKTPD--VGSRTYAEVMREQLVRGEEKEVRKKLQDKAKDGTLKAVPTNGEAKAAP--KKR 122
GKTPD + +RTY +VMREQ + EE+E+R++L +KAK G LK V NG A + P K++
Sbjct: 140 GKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGELKVV--NGAAASQPPSKRK 197
Query: 123 GRWDQTSD 130
RWDQT+D
Sbjct: 198 RRWDQTAD 205
Score = 123 (48.4 bits), Expect = 3.9e-268, Sum P(3) = 3.9e-268
Identities = 41/93 (44%), Positives = 46/93 (49%)
Query: 664 SIRRNRWDETP-KTERETPGHSSGW--AETP------KTDRAGPGGDLIQETP--TPGGV 712
S R+ RWD+T +T TP S W AETP + D PG ETP TPG
Sbjct: 194 SKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDET-PGRAKGSETPGATPG-- 250
Query: 713 SSKRRSRWDETPQATPSGAMTPSAA-TPGGMTP 744
SK WD TP TP+GA TP TPG TP
Sbjct: 251 -SKI---WDPTPSHTPAGAATPGRGDTPGHATP 279
Score = 90 (36.7 bits), Expect = 1.9e-269, Sum P(4) = 1.9e-269
Identities = 44/183 (24%), Positives = 77/183 (42%)
Query: 436 VDEDSLSPEEAKE-----RKIMKLLLKIKNGTPPMRKAA--LRQITDKAREFGAGPL-FN 487
+DED + E +E K L I P + +R T +A A L
Sbjct: 583 IDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIP 642
Query: 488 QILPLLMSPTLED---QERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYAR 544
+LP L + Q RH +K++ +I + + P++ ++ +IE L+DE R
Sbjct: 643 SLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVR 702
Query: 545 VEGREIISNLAKAA---GLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPF 601
I+ LA+AA G+ + S ++P + + +R + A A+G L+P
Sbjct: 703 TISALAIAALAEAATPYGIESFDSVLKP----LWKGIRQHRGKGLAAFLKAIGY--LIPL 756
Query: 602 LKA 604
+ A
Sbjct: 757 MDA 759
Score = 85 (35.0 bits), Expect = 4.0e-264, Sum P(3) = 4.0e-264
Identities = 26/77 (33%), Positives = 32/77 (41%)
Query: 714 SKRRSRWDETPQATPSGAMTPSAATPGGMTPSTPITPHV--GSTPLMTPSGVTPTGNKAM 771
SKR+ RWD+T TP GA TP + + TP + TP TP
Sbjct: 194 SKRKRRWDQTADQTP-GA-TPKKLSSWDQAETPGHTPSLRWDETPGRAKGSETPGATPGS 251
Query: 772 AMATPTPGHL--AAMTP 786
+ PTP H A TP
Sbjct: 252 KIWDPTPSHTPAGAATP 268
Score = 70 (29.7 bits), Expect = 1.5e-262, Sum P(3) = 1.5e-262
Identities = 36/158 (22%), Positives = 52/158 (32%)
Query: 606 GVTPAATRWDETPGHPKPGAETPGATPSTRLWDXXXXXXXXXXXXXXRETPSHDKAQSSI 665
G + +RWDETP + G TP TP TP H + +
Sbjct: 330 GASKRKSRWDETPAS-QMGGSTPVLTPGK-------TPIGTPAMNMATPTPGHIMSMTPE 381
Query: 666 RRNRWDETPKTERETPGHSSGWAETPKTDRAGPGGDLIQETPTPGGVSSKRRSRWDETPQ 725
+ W + ERE + ++ + D P G + P P G R T
Sbjct: 382 QLQAW----RWEREIDERNRPLSDE-ELDAMFPEGYKV--LPPPAGYVPIRTPARKLTAT 434
Query: 726 ATPSGAMTPSAATPGGMTPSTPITPHVGSTPLMTPSGV 763
TP G MT T + G+ P + P +
Sbjct: 435 PTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDI 472
Score = 67 (28.6 bits), Expect = 6.7e-64, Sum P(4) = 6.7e-64
Identities = 33/167 (19%), Positives = 70/167 (41%)
Query: 1139 IAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPEL-N 1197
+AKA G +++T+ ++ + R T A A+VA ++LP L + +
Sbjct: 600 LAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQ 659
Query: 1198 VQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVYGF 1257
++ +K + + +G ++ ++ ++E L+D R + I +A +
Sbjct: 660 ARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPY 719
Query: 1258 GCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQY 1304
G E + +L +W I + + AF+ A+ G + L Y
Sbjct: 720 GIE-SFDSVLKPLWKGIRQHRGKGLAAFLKAI-GYLIPLMDAEYANY 764
Score = 53 (23.7 bits), Expect = 2.2e-26, Sum P(3) = 2.2e-26
Identities = 24/133 (18%), Positives = 56/133 (42%)
Query: 489 ILPLLMS----PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYAR 544
+LP LM+ P L Q ++K + + + ++ + Y++ + ++E L+D D R
Sbjct: 1128 VLPALMNEYRVPELNVQNG--VLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR 1185
Query: 545 VEGREIISNLAKAA-------GLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPS 597
++ +++ L +++ + P++ +V A + A+G
Sbjct: 1186 QTASAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCR 1245
Query: 598 LLPFLKAGGVTPA 610
+L + G PA
Sbjct: 1246 MLQYCLQGLFHPA 1258
Score = 52 (23.4 bits), Expect = 1.8e-162, Sum P(3) = 1.8e-162
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 915 ENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLID 949
+ YR++V ++E + +GAA+I SR+ + L D
Sbjct: 826 DRRNYRQLVDTTVELA-NKVGAAEIISRIVDDLKD 859
Score = 52 (23.4 bits), Expect = 3.8e-62, Sum P(3) = 3.8e-62
Identities = 16/71 (22%), Positives = 34/71 (47%)
Query: 1183 VLPALMNEYRVPELNVQNG--VLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR 1240
+LP LM+ P L Q ++K + + + ++ + Y++ + ++E L+D D R
Sbjct: 535 ILPLLMS----PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYAR 590
Query: 1241 QTACATIKHMA 1251
I ++A
Sbjct: 591 VEGREIISNLA 601
Score = 50 (22.7 bits), Expect = 6.7e-64, Sum P(4) = 6.7e-64
Identities = 23/110 (20%), Positives = 50/110 (45%)
Query: 905 INRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAFQEQTTEDVV 964
I +++ +K+ RK + I GA + +++ L+ L ++Q E +
Sbjct: 497 IMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTL---EDQ--ERHL 551
Query: 965 MLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIA 1014
++ I+ +L V+PY+ +I I L ++ R + ++IS +A
Sbjct: 552 LVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLA 601
Score = 50 (22.7 bits), Expect = 4.5e-26, Sum P(3) = 4.5e-26
Identities = 30/139 (21%), Positives = 60/139 (43%)
Query: 469 ALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHK- 527
AL+ I + P +LP L +P L+++ + ID ++ ++ D YV
Sbjct: 996 ALKAIVNVIGMHKMTPPIKDLLPRL-TPILKNRHEKVQENCID-LVGRIADRGAEYVSAR 1053
Query: 528 --ILVVIEPLLIDEDYYARVEGREI--ISNLAKAAGLATMISTMRPDIDNIDEYVRNTTA 583
+ + E L + + + + + +AKA G +++T+ ++ + R T
Sbjct: 1054 EWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTT 1113
Query: 584 RAFAVVASALGIPSLLPFL 602
A A+VA ++LP L
Sbjct: 1114 VAIAIVAETCSPFTVLPAL 1132
Score = 45 (20.9 bits), Expect = 0., Sum P(3) = 0.
Identities = 9/19 (47%), Positives = 9/19 (47%)
Query: 117 AAPKKRGRWDQTSDGDVTP 135
A PKK WDQ TP
Sbjct: 210 ATPKKLSSWDQAETPGHTP 228
Score = 45 (20.9 bits), Expect = 0., Sum P(3) = 0.
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 99 DKAKDGTLKAVPTNGEAKAAPKKRGRWDQT 128
D+ D ++ PT G A K++ RWD+T
Sbjct: 317 DRGGD-SIGETPTPG----ASKRKSRWDET 341
Score = 45 (20.9 bits), Expect = 1.1e-264, Sum P(4) = 1.1e-264
Identities = 26/125 (20%), Positives = 56/125 (44%)
Query: 418 LPFLKPEDAQYFDK--LLVDVDEDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQ--I 473
+P + E A Y+ + +L+ + E SP+E ++ ++K++ K GT + ++ +
Sbjct: 754 IPLMDAEYANYYTREVMLILIREFQ-SPDEEMKKIVLKVV-KQCCGTDGVEANYIKTEIL 811
Query: 474 TDKAREFGAG--PLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVV 531
+ F L + L+ T+E + ++I RI+ L D Y ++
Sbjct: 812 PPFFKHFWQHRMALDRRNYRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMET 871
Query: 532 IEPLL 536
IE ++
Sbjct: 872 IEKIM 876
Score = 45 (20.9 bits), Expect = 1.5e-25, Sum P(3) = 1.5e-25
Identities = 26/128 (20%), Positives = 55/128 (42%)
Query: 433 LVDVDEDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPL 492
LVD + + A E I +++ +K+ RK + I GA + +++
Sbjct: 833 LVDTTVELANKVGAAEI-ISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQ 891
Query: 493 LMSPTL---EDQ--ERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEG 547
L+ L ++Q E +++ ++ L V+PY+ +I + L ++ R +
Sbjct: 892 LIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQA 951
Query: 548 REIISNLA 555
++IS A
Sbjct: 952 ADLISRTA 959
Score = 40 (19.1 bits), Expect = 2.3e-259, Sum P(3) = 2.3e-259
Identities = 14/34 (41%), Positives = 16/34 (47%)
Query: 600 PFLKAGGVTPAATRWDETP-GHPKPGAETPGATP 632
P + GG TP T +TP G P TP TP
Sbjct: 342 PASQMGGSTPVLTP-GKTPIGTPAMNMATP--TP 372
Score = 38 (18.4 bits), Expect = 5.3e-161, Sum P(3) = 5.3e-161
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 1128 IRRATVNTFGYIAKAIGPHDVLATL 1152
+R T F +A A+G +L L
Sbjct: 624 VRNTTARAFAVVASALGIPSLLPFL 648
>UNIPROTKB|F1MX61 [details] [associations]
symbol:SF3B1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
InterPro:IPR016024 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009952 GO:GO:0003682 GO:GO:0071013
GO:GO:0005689 CTD:23451 KO:K12828 OMA:GVEAQYI InterPro:IPR015016
Pfam:PF08920 GeneTree:ENSGT00390000018393 EMBL:DAAA02005513
EMBL:DAAA02005514 IPI:IPI00686595 RefSeq:NP_001179923.1
UniGene:Bt.43697 PRIDE:F1MX61 Ensembl:ENSBTAT00000011734
GeneID:510177 KEGG:bta:510177 NextBio:20869314 Uniprot:F1MX61
Length = 1304
Score = 2161 (765.8 bits), Expect = 0., Sum P(3) = 0.
Identities = 413/464 (89%), Positives = 435/464 (93%)
Query: 896 ARLVGASEIINRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAF 955
A VGA+EII+R+VDDLKDE EQYRKMVME+IEK M NLGAADID +LEEQLIDGILYAF
Sbjct: 841 ANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAF 900
Query: 956 QEQTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAV 1015
QEQTTED VMLNGFGT+VN LGKRVKPYLPQICGT+LWRLNNKSAKVRQQAADLISR AV
Sbjct: 901 QEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAV 960
Query: 1016 VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL 1075
VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGM KMTPPIKDLLPRL
Sbjct: 961 VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRL 1020
Query: 1076 TPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFXXXXXXKAHKKAIRRATVNT 1135
TPILKNRHEKVQENCIDLVGRIADRG EYVSAREWMRICF KAHKKAIRRATVNT
Sbjct: 1021 TPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNT 1080
Query: 1136 FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE 1195
FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE
Sbjct: 1081 FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE 1140
Query: 1196 LNVQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVY 1255
LNVQNGVLK+LSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTA A ++HM+LGVY
Sbjct: 1141 LNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVY 1200
Query: 1256 GFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHPARK 1315
GFGCED+L HLLNYVWPN+FETSPH++QA M A+EGLRVA+GP R+LQY LQGLFHPARK
Sbjct: 1201 GFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARK 1260
Query: 1316 VRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYELDYVL 1359
VRDVYWKIYNS+YIG QDALI+ YPRI ND KN Y+RYELDY+L
Sbjct: 1261 VRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYIL 1304
Score = 1231 (438.4 bits), Expect = 0., Sum P(3) = 0.
Identities = 241/289 (83%), Positives = 258/289 (89%)
Query: 316 PGYKVLQPPAGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAGYI 375
P + P GH+ +MTPEQ+QA+RWEREIDERNRPL+D+EL+AMFP GYKVL PPAGY+
Sbjct: 363 PAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAGYV 422
Query: 376 PIRTPARKLXXXXXXXXXXXXXFFIQQEDKTAKYMDNQPKGNLPFLKPEDAQYFDKLLVD 435
PIRTPARKL F +Q ED+T K +++QP GNLPFLKP+D QYFDKLLVD
Sbjct: 423 PIRTPARKLTATPTPLGGMTG-FHMQTEDRTMKNVNDQPSGNLPFLKPDDIQYFDKLLVD 481
Query: 436 VDEDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMS 495
VDE +LSPEE KERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMS
Sbjct: 482 VDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMS 541
Query: 496 PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLA 555
PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLA
Sbjct: 542 PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLA 601
Query: 556 KAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFLKA 604
KAAGLATMISTMRPDIDN+DEYVRNTTARAFAVVASALGIPSLLPFLKA
Sbjct: 602 KAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKA 650
Score = 397 (144.8 bits), Expect = 4.4e-297, Sum P(3) = 4.4e-297
Identities = 89/165 (53%), Positives = 100/165 (60%)
Query: 606 GVTPAATRWDETPGHPKPGAETPGATPSTRLWDXXXXXXXXXXXXXXR------ETPSHD 659
G TP+ RWDETPG K G+ETPGATP +++WD R TP H
Sbjct: 225 GHTPSL-RWDETPGRAK-GSETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHG 282
Query: 660 KAQSSIRRNRWDETPKTERETPGHSSGWAETPKTDRAGPGGDLIQETPTPGGVSSKRRSR 719
A SS R+NRWDETPKTER+TPGH SGWAETP+TDR GGD I ETPTPG +SKR+SR
Sbjct: 283 GATSSARKNRWDETPKTERDTPGHGSGWAETPRTDR---GGDSIGETPTPG--ASKRKSR 337
Query: 720 WDETPQATPSGAMTPSAATPGGMTPSTPI----TPHVGSTPLMTP 760
WDETP A+ G TP TPG TP TP G MTP
Sbjct: 338 WDETP-ASQMGGSTP-VLTPGKTPIGTPAMNMATPTPGHIMSMTP 380
Score = 393 (143.4 bits), Expect = 1.2e-296, Sum P(3) = 1.2e-296
Identities = 111/239 (46%), Positives = 128/239 (53%)
Query: 613 RWDET----PGH-PKP-----GAETPGATPSTRLWDXXXXXXXXXXXXXXRE-------T 655
RWD+T PG PK AETPG TPS R WD T
Sbjct: 199 RWDQTADQTPGATPKKLSSWDQAETPGHTPSLR-WDETPGRAKGSETPGATPGSKIWDPT 257
Query: 656 PSHDKAQSSIRRNRWDETPKTERETPGH----SSG----WAETPKTDRAGPG-GDLIQET 706
PSH A ++ R D TP TPGH SS W ETPKT+R PG G ET
Sbjct: 258 PSHTPAGAATP-GRGD-TPG--HATPGHGGATSSARKNRWDETPKTERDTPGHGSGWAET 313
Query: 707 PTPGGVSSKRRSRWDETPQATPSGAMTPSAATPGGMTPSTPITPHVGSTPLMTPSGVTPT 766
P R R ++ TP TP A+ TP + GSTP++TP G TP
Sbjct: 314 P--------RTDRGGDSIGETP----TPGASKRKSRWDETPASQMGGSTPVLTP-GKTPI 360
Query: 767 GNKAMAMATPTPGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPA 825
G AM MATPTPGH+ +MTPEQ+QA+RWEREIDERNRPL+D+EL+AMFP GYKVL PPA
Sbjct: 361 GTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPA 419
Score = 336 (123.3 bits), Expect = 0., Sum P(3) = 0.
Identities = 89/210 (42%), Positives = 117/210 (55%)
Query: 152 NIEAQIRDIQNRKKDVSEGGGEEKQKRVGLGESGYFDSDIYDGG-GKFEGYVKSIA---- 206
+IEAQIR+IQ +K + E G VGL +GY+D +IY G +F GYV SIA
Sbjct: 10 DIEAQIREIQGKKAALDEAQG------VGLDSTGYYDQEIYGGSDSRFAGYVTSIAATEL 63
Query: 207 -DDDFDYQASFNQ--NKRSGYTAPAALLNDIAQSEKDYDPFADRRQKTVAEKEDEYRAIR 263
DDD DY +S + K+ GY AP ALLNDI QS + YDPFA+ R +A++EDEY+ R
Sbjct: 64 EDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYKKHR 123
Query: 264 RRMIISPERVDPFAEGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQP 323
R MIISPER+DPFA+G TP+ R ++ R + LT +E E K
Sbjct: 124 RTMIISPERLDPFADG---GKTPDPKMNARTYMDV-MREQHLTKEEREIRQQLAEKA--- 176
Query: 324 PAGHL------AAMTPEQIQAYRWEREIDE 347
AG L AA P + RW++ D+
Sbjct: 177 KAGELKVVNGAAASQPPSKRKRRWDQTADQ 206
Score = 231 (86.4 bits), Expect = 1.9e-269, Sum P(4) = 1.9e-269
Identities = 40/55 (72%), Positives = 49/55 (89%)
Query: 279 GHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAGHLAAMTP 333
GH+ +MTPEQ+QA+RWEREIDERNRPL+D+EL+AMFP GYKVL PPAG++ TP
Sbjct: 373 GHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAGYVPIRTP 427
Score = 176 (67.0 bits), Expect = 9.5e-248, Sum P(3) = 9.5e-248
Identities = 42/108 (38%), Positives = 63/108 (58%)
Query: 1 YIPIRTPARKLXXXXXXXXXXXXXFFIQQEDKTAKYMDNQPKGNLPFLKPEDAQYFDKLL 60
Y+PIRTPARKL F +Q ED+T K +++QP GNLPFLKP+D QYFDKLL
Sbjct: 421 YVPIRTPARKLTATPTPLGGMTG-FHMQTEDRTMKNVNDQPSGNLPFLKPDDIQYFDKLL 479
Query: 61 SNGKHCGKTPDVGSRTYAEVMREQL-VRGEEKEVRK----KLQDKAKD 103
+ +P+ + ++M+ L ++ +RK ++ DKA++
Sbjct: 480 VDVDESTLSPE--EQKERKIMKLLLKIKNGTPPMRKAALRQITDKARE 525
Score = 164 (62.8 bits), Expect = 0., Sum P(3) = 0.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 67 GKTPD--VGSRTYAEVMREQLVRGEEKEVRKKLQDKAKDGTLKAVPTNGEAKAAP--KKR 122
GKTPD + +RTY +VMREQ + EE+E+R++L +KAK G LK V NG A + P K++
Sbjct: 140 GKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGELKVV--NGAAASQPPSKRK 197
Query: 123 GRWDQTSD 130
RWDQT+D
Sbjct: 198 RRWDQTAD 205
Score = 123 (48.4 bits), Expect = 3.9e-268, Sum P(3) = 3.9e-268
Identities = 41/93 (44%), Positives = 46/93 (49%)
Query: 664 SIRRNRWDETP-KTERETPGHSSGW--AETP------KTDRAGPGGDLIQETP--TPGGV 712
S R+ RWD+T +T TP S W AETP + D PG ETP TPG
Sbjct: 194 SKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDET-PGRAKGSETPGATPG-- 250
Query: 713 SSKRRSRWDETPQATPSGAMTPSAA-TPGGMTP 744
SK WD TP TP+GA TP TPG TP
Sbjct: 251 -SKI---WDPTPSHTPAGAATPGRGDTPGHATP 279
Score = 90 (36.7 bits), Expect = 1.9e-269, Sum P(4) = 1.9e-269
Identities = 44/183 (24%), Positives = 77/183 (42%)
Query: 436 VDEDSLSPEEAKE-----RKIMKLLLKIKNGTPPMRKAA--LRQITDKAREFGAGPL-FN 487
+DED + E +E K L I P + +R T +A A L
Sbjct: 583 IDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIP 642
Query: 488 QILPLLMSPTLED---QERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYAR 544
+LP L + Q RH +K++ +I + + P++ ++ +IE L+DE R
Sbjct: 643 SLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVR 702
Query: 545 VEGREIISNLAKAA---GLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPF 601
I+ LA+AA G+ + S ++P + + +R + A A+G L+P
Sbjct: 703 TISALAIAALAEAATPYGIESFDSVLKP----LWKGIRQHRGKGLAAFLKAIGY--LIPL 756
Query: 602 LKA 604
+ A
Sbjct: 757 MDA 759
Score = 85 (35.0 bits), Expect = 4.0e-264, Sum P(3) = 4.0e-264
Identities = 26/77 (33%), Positives = 32/77 (41%)
Query: 714 SKRRSRWDETPQATPSGAMTPSAATPGGMTPSTPITPHV--GSTPLMTPSGVTPTGNKAM 771
SKR+ RWD+T TP GA TP + + TP + TP TP
Sbjct: 194 SKRKRRWDQTADQTP-GA-TPKKLSSWDQAETPGHTPSLRWDETPGRAKGSETPGATPGS 251
Query: 772 AMATPTPGHL--AAMTP 786
+ PTP H A TP
Sbjct: 252 KIWDPTPSHTPAGAATP 268
Score = 69 (29.3 bits), Expect = 2.0e-262, Sum P(3) = 2.0e-262
Identities = 36/158 (22%), Positives = 51/158 (32%)
Query: 606 GVTPAATRWDETPGHPKPGAETPGATPSTRLWDXXXXXXXXXXXXXXRETPSHDKAQSSI 665
G + +RWDETP + G TP TP TP H + +
Sbjct: 330 GASKRKSRWDETPAS-QMGGSTPVLTPGK-------TPIGTPAMNMATPTPGHIMSMTPE 381
Query: 666 RRNRWDETPKTERETPGHSSGWAETPKTDRAGPGGDLIQETPTPGGVSSKRRSRWDETPQ 725
+ W + ERE + ++ + D P G + P P G R T
Sbjct: 382 QLQAW----RWEREIDERNRPLSDE-ELDAMFPEGYKV--LPPPAGYVPIRTPARKLTAT 434
Query: 726 ATPSGAMTPSAATPGGMTPSTPITPHVGSTPLMTPSGV 763
TP G MT T G+ P + P +
Sbjct: 435 PTPLGGMTGFHMQTEDRTMKNVNDQPSGNLPFLKPDDI 472
Score = 67 (28.6 bits), Expect = 6.7e-64, Sum P(4) = 6.7e-64
Identities = 33/167 (19%), Positives = 70/167 (41%)
Query: 1139 IAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPEL-N 1197
+AKA G +++T+ ++ + R T A A+VA ++LP L + +
Sbjct: 600 LAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQ 659
Query: 1198 VQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVYGF 1257
++ +K + + +G ++ ++ ++E L+D R + I +A +
Sbjct: 660 ARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPY 719
Query: 1258 GCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQY 1304
G E + +L +W I + + AF+ A+ G + L Y
Sbjct: 720 GIE-SFDSVLKPLWKGIRQHRGKGLAAFLKAI-GYLIPLMDAEYANY 764
Score = 53 (23.7 bits), Expect = 2.2e-26, Sum P(3) = 2.2e-26
Identities = 24/133 (18%), Positives = 56/133 (42%)
Query: 489 ILPLLMS----PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYAR 544
+LP LM+ P L Q ++K + + + ++ + Y++ + ++E L+D D R
Sbjct: 1128 VLPALMNEYRVPELNVQNG--VLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR 1185
Query: 545 VEGREIISNLAKAA-------GLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPS 597
++ +++ L +++ + P++ +V A + A+G
Sbjct: 1186 QTASAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCR 1245
Query: 598 LLPFLKAGGVTPA 610
+L + G PA
Sbjct: 1246 MLQYCLQGLFHPA 1258
Score = 52 (23.4 bits), Expect = 1.8e-162, Sum P(3) = 1.8e-162
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 915 ENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLID 949
+ YR++V ++E + +GAA+I SR+ + L D
Sbjct: 826 DRRNYRQLVDTTVELA-NKVGAAEIISRIVDDLKD 859
Score = 52 (23.4 bits), Expect = 3.8e-62, Sum P(3) = 3.8e-62
Identities = 16/71 (22%), Positives = 34/71 (47%)
Query: 1183 VLPALMNEYRVPELNVQNG--VLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR 1240
+LP LM+ P L Q ++K + + + ++ + Y++ + ++E L+D D R
Sbjct: 535 ILPLLMS----PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYAR 590
Query: 1241 QTACATIKHMA 1251
I ++A
Sbjct: 591 VEGREIISNLA 601
Score = 50 (22.7 bits), Expect = 6.7e-64, Sum P(4) = 6.7e-64
Identities = 23/110 (20%), Positives = 50/110 (45%)
Query: 905 INRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAFQEQTTEDVV 964
I +++ +K+ RK + I GA + +++ L+ L ++Q E +
Sbjct: 497 IMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTL---EDQ--ERHL 551
Query: 965 MLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIA 1014
++ I+ +L V+PY+ +I I L ++ R + ++IS +A
Sbjct: 552 LVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLA 601
Score = 50 (22.7 bits), Expect = 4.5e-26, Sum P(3) = 4.5e-26
Identities = 30/139 (21%), Positives = 60/139 (43%)
Query: 469 ALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHK- 527
AL+ I + P +LP L +P L+++ + ID ++ ++ D YV
Sbjct: 996 ALKAIVNVIGMHKMTPPIKDLLPRL-TPILKNRHEKVQENCID-LVGRIADRGAEYVSAR 1053
Query: 528 --ILVVIEPLLIDEDYYARVEGREI--ISNLAKAAGLATMISTMRPDIDNIDEYVRNTTA 583
+ + E L + + + + + +AKA G +++T+ ++ + R T
Sbjct: 1054 EWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTT 1113
Query: 584 RAFAVVASALGIPSLLPFL 602
A A+VA ++LP L
Sbjct: 1114 VAIAIVAETCSPFTVLPAL 1132
Score = 45 (20.9 bits), Expect = 0., Sum P(3) = 0.
Identities = 9/19 (47%), Positives = 9/19 (47%)
Query: 117 AAPKKRGRWDQTSDGDVTP 135
A PKK WDQ TP
Sbjct: 210 ATPKKLSSWDQAETPGHTP 228
Score = 45 (20.9 bits), Expect = 0., Sum P(3) = 0.
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 99 DKAKDGTLKAVPTNGEAKAAPKKRGRWDQT 128
D+ D ++ PT G A K++ RWD+T
Sbjct: 317 DRGGD-SIGETPTPG----ASKRKSRWDET 341
Score = 45 (20.9 bits), Expect = 1.1e-264, Sum P(4) = 1.1e-264
Identities = 26/125 (20%), Positives = 56/125 (44%)
Query: 418 LPFLKPEDAQYFDK--LLVDVDEDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQ--I 473
+P + E A Y+ + +L+ + E SP+E ++ ++K++ K GT + ++ +
Sbjct: 754 IPLMDAEYANYYTREVMLILIREFQ-SPDEEMKKIVLKVV-KQCCGTDGVEANYIKTEIL 811
Query: 474 TDKAREFGAG--PLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVV 531
+ F L + L+ T+E + ++I RI+ L D Y ++
Sbjct: 812 PPFFKHFWQHRMALDRRNYRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMET 871
Query: 532 IEPLL 536
IE ++
Sbjct: 872 IEKIM 876
Score = 45 (20.9 bits), Expect = 1.5e-25, Sum P(3) = 1.5e-25
Identities = 26/128 (20%), Positives = 55/128 (42%)
Query: 433 LVDVDEDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPL 492
LVD + + A E I +++ +K+ RK + I GA + +++
Sbjct: 833 LVDTTVELANKVGAAEI-ISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQ 891
Query: 493 LMSPTL---EDQ--ERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEG 547
L+ L ++Q E +++ ++ L V+PY+ +I + L ++ R +
Sbjct: 892 LIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQA 951
Query: 548 REIISNLA 555
++IS A
Sbjct: 952 ADLISRTA 959
Score = 40 (19.1 bits), Expect = 2.3e-259, Sum P(3) = 2.3e-259
Identities = 14/34 (41%), Positives = 16/34 (47%)
Query: 600 PFLKAGGVTPAATRWDETP-GHPKPGAETPGATP 632
P + GG TP T +TP G P TP TP
Sbjct: 342 PASQMGGSTPVLTP-GKTPIGTPAMNMATP--TP 372
Score = 38 (18.4 bits), Expect = 5.3e-161, Sum P(3) = 5.3e-161
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 1128 IRRATVNTFGYIAKAIGPHDVLATL 1152
+R T F +A A+G +L L
Sbjct: 624 VRNTTARAFAVVASALGIPSLLPFL 648
>MGI|MGI:1932339 [details] [associations]
symbol:Sf3b1 "splicing factor 3b, subunit 1" species:10090
"Mus musculus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005681 "spliceosomal
complex" evidence=ISO] [GO:0005689 "U12-type spliceosomal complex"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI]
[GO:0071013 "catalytic step 2 spliceosome" evidence=ISO]
InterPro:IPR016024 MGI:MGI:1932339 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0009952
GO:GO:0003682 GO:GO:0005681 GO:GO:0000398 eggNOG:COG5181
HOGENOM:HOG000166737 HOVERGEN:HBG079173 OrthoDB:EOG4RJG0Q
InterPro:IPR015016 Pfam:PF08920 EMBL:AB037890 EMBL:AK012632
IPI:IPI00623284 UniGene:Mm.279736 ProteinModelPortal:Q99NB9
SMR:Q99NB9 STRING:Q99NB9 PhosphoSite:Q99NB9 PaxDb:Q99NB9
PRIDE:Q99NB9 UCSC:uc007azx.1 InParanoid:Q99NB9 CleanEx:MM_SF3B1
Genevestigator:Q99NB9 GermOnline:ENSMUSG00000025982 Uniprot:Q99NB9
Length = 1304
Score = 2158 (764.7 bits), Expect = 0., Sum P(3) = 0.
Identities = 412/464 (88%), Positives = 435/464 (93%)
Query: 896 ARLVGASEIINRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAF 955
A VGA+EII+R+VDDLKDE EQYRKMVME+IEK M NLGAADID +LEEQLIDGILYAF
Sbjct: 841 ANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAF 900
Query: 956 QEQTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAV 1015
QEQTTED VMLNGFGT+VN LGKRVKPYLPQICGT+LWRLNNKSAKVRQQAADLISR AV
Sbjct: 901 QEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAV 960
Query: 1016 VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL 1075
VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGM KMTPPIKDLLPRL
Sbjct: 961 VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRL 1020
Query: 1076 TPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFXXXXXXKAHKKAIRRATVNT 1135
TPILKNRHEKVQENCIDLVGRIADRG EYVSAREWMRICF KAHKKAIRRATVNT
Sbjct: 1021 TPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNT 1080
Query: 1136 FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE 1195
FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE
Sbjct: 1081 FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE 1140
Query: 1196 LNVQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVY 1255
LNVQNGVLK+LSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTA A ++HM+LGVY
Sbjct: 1141 LNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVY 1200
Query: 1256 GFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHPARK 1315
GFGCED+L HLLNYVWPN+FETSPH++QA M A+EGLRVA+GP R+LQY LQGLFHPARK
Sbjct: 1201 GFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARK 1260
Query: 1316 VRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYELDYVL 1359
VRDVYWKIYNS+YIG QDALI+ YPRI ND KN Y+RY+LDY+L
Sbjct: 1261 VRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYDLDYIL 1304
Score = 1231 (438.4 bits), Expect = 0., Sum P(3) = 0.
Identities = 241/289 (83%), Positives = 258/289 (89%)
Query: 316 PGYKVLQPPAGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAGYI 375
P + P GH+ +MTPEQ+QA+RWEREIDERNRPL+D+EL+AMFP GYKVL PPAGY+
Sbjct: 363 PAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAGYV 422
Query: 376 PIRTPARKLXXXXXXXXXXXXXFFIQQEDKTAKYMDNQPKGNLPFLKPEDAQYFDKLLVD 435
PIRTPARKL F +Q ED+T K +++QP GNLPFLKP+D QYFDKLLVD
Sbjct: 423 PIRTPARKLTATPTPLGGMTG-FHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLVD 481
Query: 436 VDEDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMS 495
VDE +LSPEE KERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMS
Sbjct: 482 VDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMS 541
Query: 496 PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLA 555
PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLA
Sbjct: 542 PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLA 601
Query: 556 KAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFLKA 604
KAAGLATMISTMRPDIDN+DEYVRNTTARAFAVVASALGIPSLLPFLKA
Sbjct: 602 KAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKA 650
Score = 397 (144.8 bits), Expect = 9.1e-297, Sum P(3) = 9.1e-297
Identities = 89/165 (53%), Positives = 100/165 (60%)
Query: 606 GVTPAATRWDETPGHPKPGAETPGATPSTRLWDXXXXXXXXXXXXXXR------ETPSHD 659
G TP+ RWDETPG K G+ETPGATP +++WD R TP H
Sbjct: 225 GHTPSL-RWDETPGRAK-GSETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHG 282
Query: 660 KAQSSIRRNRWDETPKTERETPGHSSGWAETPKTDRAGPGGDLIQETPTPGGVSSKRRSR 719
A SS R+NRWDETPKTER+TPGH SGWAETP+TDR GGD I ETPTPG +SKR+SR
Sbjct: 283 GATSSARKNRWDETPKTERDTPGHGSGWAETPRTDR---GGDSIGETPTPG--ASKRKSR 337
Query: 720 WDETPQATPSGAMTPSAATPGGMTPSTPI----TPHVGSTPLMTP 760
WDETP A+ G TP TPG TP TP G MTP
Sbjct: 338 WDETP-ASQMGGSTP-VLTPGKTPIGTPAMNMATPTPGHIMSMTP 380
Score = 393 (143.4 bits), Expect = 2.4e-296, Sum P(3) = 2.4e-296
Identities = 111/239 (46%), Positives = 128/239 (53%)
Query: 613 RWDET----PGH-PKP-----GAETPGATPSTRLWDXXXXXXXXXXXXXXRE-------T 655
RWD+T PG PK AETPG TPS R WD T
Sbjct: 199 RWDQTADQTPGATPKKLSSWDQAETPGHTPSLR-WDETPGRAKGSETPGATPGSKIWDPT 257
Query: 656 PSHDKAQSSIRRNRWDETPKTERETPGH----SSG----WAETPKTDRAGPG-GDLIQET 706
PSH A ++ R D TP TPGH SS W ETPKT+R PG G ET
Sbjct: 258 PSHTPAGAATP-GRGD-TPG--HATPGHGGATSSARKNRWDETPKTERDTPGHGSGWAET 313
Query: 707 PTPGGVSSKRRSRWDETPQATPSGAMTPSAATPGGMTPSTPITPHVGSTPLMTPSGVTPT 766
P R R ++ TP TP A+ TP + GSTP++TP G TP
Sbjct: 314 P--------RTDRGGDSIGETP----TPGASKRKSRWDETPASQMGGSTPVLTP-GKTPI 360
Query: 767 GNKAMAMATPTPGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPA 825
G AM MATPTPGH+ +MTPEQ+QA+RWEREIDERNRPL+D+EL+AMFP GYKVL PPA
Sbjct: 361 GTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPA 419
Score = 336 (123.3 bits), Expect = 0., Sum P(3) = 0.
Identities = 89/210 (42%), Positives = 117/210 (55%)
Query: 152 NIEAQIRDIQNRKKDVSEGGGEEKQKRVGLGESGYFDSDIYDGG-GKFEGYVKSIA---- 206
+IEAQIR+IQ +K + E G VGL +GY+D +IY G +F GYV SIA
Sbjct: 10 DIEAQIREIQGKKAALDEAQG------VGLDSTGYYDQEIYGGSDSRFAGYVTSIAATEL 63
Query: 207 -DDDFDYQASFNQ--NKRSGYTAPAALLNDIAQSEKDYDPFADRRQKTVAEKEDEYRAIR 263
DDD DY +S + K+ GY AP ALLNDI QS + YDPFA+ R +A++EDEY+ R
Sbjct: 64 EDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYKKHR 123
Query: 264 RRMIISPERVDPFAEGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQP 323
R MIISPER+DPFA+G TP+ R ++ R + LT +E E K
Sbjct: 124 RTMIISPERLDPFADG---GKTPDPKMNARTYMDV-MREQHLTKEEREIRQQLAEKA--- 176
Query: 324 PAGHL------AAMTPEQIQAYRWEREIDE 347
AG L AA P + RW++ D+
Sbjct: 177 KAGELKVVNGAAASQPPSKRKRRWDQTADQ 206
Score = 231 (86.4 bits), Expect = 3.9e-269, Sum P(4) = 3.9e-269
Identities = 40/55 (72%), Positives = 49/55 (89%)
Query: 279 GHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAGHLAAMTP 333
GH+ +MTPEQ+QA+RWEREIDERNRPL+D+EL+AMFP GYKVL PPAG++ TP
Sbjct: 373 GHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAGYVPIRTP 427
Score = 176 (67.0 bits), Expect = 2.0e-247, Sum P(3) = 2.0e-247
Identities = 42/108 (38%), Positives = 63/108 (58%)
Query: 1 YIPIRTPARKLXXXXXXXXXXXXXFFIQQEDKTAKYMDNQPKGNLPFLKPEDAQYFDKLL 60
Y+PIRTPARKL F +Q ED+T K +++QP GNLPFLKP+D QYFDKLL
Sbjct: 421 YVPIRTPARKLTATPTPLGGMTG-FHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLL 479
Query: 61 SNGKHCGKTPDVGSRTYAEVMREQL-VRGEEKEVRK----KLQDKAKD 103
+ +P+ + ++M+ L ++ +RK ++ DKA++
Sbjct: 480 VDVDESTLSPE--EQKERKIMKLLLKIKNGTPPMRKAALRQITDKARE 525
Score = 164 (62.8 bits), Expect = 0., Sum P(3) = 0.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 67 GKTPD--VGSRTYAEVMREQLVRGEEKEVRKKLQDKAKDGTLKAVPTNGEAKAAP--KKR 122
GKTPD + +RTY +VMREQ + EE+E+R++L +KAK G LK V NG A + P K++
Sbjct: 140 GKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGELKVV--NGAAASQPPSKRK 197
Query: 123 GRWDQTSD 130
RWDQT+D
Sbjct: 198 RRWDQTAD 205
Score = 123 (48.4 bits), Expect = 8.1e-268, Sum P(3) = 8.1e-268
Identities = 41/93 (44%), Positives = 46/93 (49%)
Query: 664 SIRRNRWDETP-KTERETPGHSSGW--AETP------KTDRAGPGGDLIQETP--TPGGV 712
S R+ RWD+T +T TP S W AETP + D PG ETP TPG
Sbjct: 194 SKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDET-PGRAKGSETPGATPG-- 250
Query: 713 SSKRRSRWDETPQATPSGAMTPSAA-TPGGMTP 744
SK WD TP TP+GA TP TPG TP
Sbjct: 251 -SKI---WDPTPSHTPAGAATPGRGDTPGHATP 279
Score = 90 (36.7 bits), Expect = 3.9e-269, Sum P(4) = 3.9e-269
Identities = 44/183 (24%), Positives = 77/183 (42%)
Query: 436 VDEDSLSPEEAKE-----RKIMKLLLKIKNGTPPMRKAA--LRQITDKAREFGAGPL-FN 487
+DED + E +E K L I P + +R T +A A L
Sbjct: 583 IDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIP 642
Query: 488 QILPLLMSPTLED---QERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYAR 544
+LP L + Q RH +K++ +I + + P++ ++ +IE L+DE R
Sbjct: 643 SLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVR 702
Query: 545 VEGREIISNLAKAA---GLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPF 601
I+ LA+AA G+ + S ++P + + +R + A A+G L+P
Sbjct: 703 TISALAIAALAEAATPYGIESFDSVLKP----LWKGIRQHRGKGLAAFLKAIGY--LIPL 756
Query: 602 LKA 604
+ A
Sbjct: 757 MDA 759
Score = 85 (35.0 bits), Expect = 8.3e-264, Sum P(3) = 8.3e-264
Identities = 26/77 (33%), Positives = 32/77 (41%)
Query: 714 SKRRSRWDETPQATPSGAMTPSAATPGGMTPSTPITPHV--GSTPLMTPSGVTPTGNKAM 771
SKR+ RWD+T TP GA TP + + TP + TP TP
Sbjct: 194 SKRKRRWDQTADQTP-GA-TPKKLSSWDQAETPGHTPSLRWDETPGRAKGSETPGATPGS 251
Query: 772 AMATPTPGHL--AAMTP 786
+ PTP H A TP
Sbjct: 252 KIWDPTPSHTPAGAATP 268
Score = 70 (29.7 bits), Expect = 3.2e-262, Sum P(3) = 3.2e-262
Identities = 36/158 (22%), Positives = 52/158 (32%)
Query: 606 GVTPAATRWDETPGHPKPGAETPGATPSTRLWDXXXXXXXXXXXXXXRETPSHDKAQSSI 665
G + +RWDETP + G TP TP TP H + +
Sbjct: 330 GASKRKSRWDETPAS-QMGGSTPVLTPGK-------TPIGTPAMNMATPTPGHIMSMTPE 381
Query: 666 RRNRWDETPKTERETPGHSSGWAETPKTDRAGPGGDLIQETPTPGGVSSKRRSRWDETPQ 725
+ W + ERE + ++ + D P G + P P G R T
Sbjct: 382 QLQAW----RWEREIDERNRPLSDE-ELDAMFPEGYKV--LPPPAGYVPIRTPARKLTAT 434
Query: 726 ATPSGAMTPSAATPGGMTPSTPITPHVGSTPLMTPSGV 763
TP G MT T + G+ P + P +
Sbjct: 435 PTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDI 472
Score = 67 (28.6 bits), Expect = 6.7e-64, Sum P(4) = 6.7e-64
Identities = 33/167 (19%), Positives = 70/167 (41%)
Query: 1139 IAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPEL-N 1197
+AKA G +++T+ ++ + R T A A+VA ++LP L + +
Sbjct: 600 LAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQ 659
Query: 1198 VQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVYGF 1257
++ +K + + +G ++ ++ ++E L+D R + I +A +
Sbjct: 660 ARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPY 719
Query: 1258 GCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQY 1304
G E + +L +W I + + AF+ A+ G + L Y
Sbjct: 720 GIE-SFDSVLKPLWKGIRQHRGKGLAAFLKAI-GYLIPLMDAEYANY 764
Score = 53 (23.7 bits), Expect = 2.2e-26, Sum P(3) = 2.2e-26
Identities = 24/133 (18%), Positives = 56/133 (42%)
Query: 489 ILPLLMS----PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYAR 544
+LP LM+ P L Q ++K + + + ++ + Y++ + ++E L+D D R
Sbjct: 1128 VLPALMNEYRVPELNVQNG--VLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR 1185
Query: 545 VEGREIISNLAKAA-------GLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPS 597
++ +++ L +++ + P++ +V A + A+G
Sbjct: 1186 QTASAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCR 1245
Query: 598 LLPFLKAGGVTPA 610
+L + G PA
Sbjct: 1246 MLQYCLQGLFHPA 1258
Score = 52 (23.4 bits), Expect = 1.8e-162, Sum P(3) = 1.8e-162
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 915 ENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLID 949
+ YR++V ++E + +GAA+I SR+ + L D
Sbjct: 826 DRRNYRQLVDTTVELA-NKVGAAEIISRIVDDLKD 859
Score = 52 (23.4 bits), Expect = 3.8e-62, Sum P(3) = 3.8e-62
Identities = 16/71 (22%), Positives = 34/71 (47%)
Query: 1183 VLPALMNEYRVPELNVQNG--VLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR 1240
+LP LM+ P L Q ++K + + + ++ + Y++ + ++E L+D D R
Sbjct: 535 ILPLLMS----PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYAR 590
Query: 1241 QTACATIKHMA 1251
I ++A
Sbjct: 591 VEGREIISNLA 601
Score = 50 (22.7 bits), Expect = 6.7e-64, Sum P(4) = 6.7e-64
Identities = 23/110 (20%), Positives = 50/110 (45%)
Query: 905 INRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAFQEQTTEDVV 964
I +++ +K+ RK + I GA + +++ L+ L ++Q E +
Sbjct: 497 IMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTL---EDQ--ERHL 551
Query: 965 MLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIA 1014
++ I+ +L V+PY+ +I I L ++ R + ++IS +A
Sbjct: 552 LVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLA 601
Score = 50 (22.7 bits), Expect = 4.5e-26, Sum P(3) = 4.5e-26
Identities = 30/139 (21%), Positives = 60/139 (43%)
Query: 469 ALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHK- 527
AL+ I + P +LP L +P L+++ + ID ++ ++ D YV
Sbjct: 996 ALKAIVNVIGMHKMTPPIKDLLPRL-TPILKNRHEKVQENCID-LVGRIADRGAEYVSAR 1053
Query: 528 --ILVVIEPLLIDEDYYARVEGREI--ISNLAKAAGLATMISTMRPDIDNIDEYVRNTTA 583
+ + E L + + + + + +AKA G +++T+ ++ + R T
Sbjct: 1054 EWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTT 1113
Query: 584 RAFAVVASALGIPSLLPFL 602
A A+VA ++LP L
Sbjct: 1114 VAIAIVAETCSPFTVLPAL 1132
Score = 45 (20.9 bits), Expect = 0., Sum P(3) = 0.
Identities = 9/19 (47%), Positives = 9/19 (47%)
Query: 117 AAPKKRGRWDQTSDGDVTP 135
A PKK WDQ TP
Sbjct: 210 ATPKKLSSWDQAETPGHTP 228
Score = 45 (20.9 bits), Expect = 0., Sum P(3) = 0.
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 99 DKAKDGTLKAVPTNGEAKAAPKKRGRWDQT 128
D+ D ++ PT G A K++ RWD+T
Sbjct: 317 DRGGD-SIGETPTPG----ASKRKSRWDET 341
Score = 45 (20.9 bits), Expect = 2.2e-264, Sum P(4) = 2.2e-264
Identities = 26/125 (20%), Positives = 56/125 (44%)
Query: 418 LPFLKPEDAQYFDK--LLVDVDEDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQ--I 473
+P + E A Y+ + +L+ + E SP+E ++ ++K++ K GT + ++ +
Sbjct: 754 IPLMDAEYANYYTREVMLILIREFQ-SPDEEMKKIVLKVV-KQCCGTDGVEANYIKTEIL 811
Query: 474 TDKAREFGAG--PLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVV 531
+ F L + L+ T+E + ++I RI+ L D Y ++
Sbjct: 812 PPFFKHFWQHRMALDRRNYRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMET 871
Query: 532 IEPLL 536
IE ++
Sbjct: 872 IEKIM 876
Score = 45 (20.9 bits), Expect = 1.5e-25, Sum P(3) = 1.5e-25
Identities = 26/128 (20%), Positives = 55/128 (42%)
Query: 433 LVDVDEDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPL 492
LVD + + A E I +++ +K+ RK + I GA + +++
Sbjct: 833 LVDTTVELANKVGAAEI-ISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQ 891
Query: 493 LMSPTL---EDQ--ERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEG 547
L+ L ++Q E +++ ++ L V+PY+ +I + L ++ R +
Sbjct: 892 LIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQA 951
Query: 548 REIISNLA 555
++IS A
Sbjct: 952 ADLISRTA 959
Score = 40 (19.1 bits), Expect = 4.7e-259, Sum P(3) = 4.7e-259
Identities = 14/34 (41%), Positives = 16/34 (47%)
Query: 600 PFLKAGGVTPAATRWDETP-GHPKPGAETPGATP 632
P + GG TP T +TP G P TP TP
Sbjct: 342 PASQMGGSTPVLTP-GKTPIGTPAMNMATP--TP 372
Score = 38 (18.4 bits), Expect = 5.3e-161, Sum P(3) = 5.3e-161
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 1128 IRRATVNTFGYIAKAIGPHDVLATL 1152
+R T F +A A+G +L L
Sbjct: 624 VRNTTARAFAVVASALGIPSLLPFL 648
>UNIPROTKB|F1SMZ9 [details] [associations]
symbol:SF3B1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
InterPro:IPR016024 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009952 GO:GO:0003682 GO:GO:0071013
GO:GO:0005689 OMA:GVEAQYI InterPro:IPR015016 Pfam:PF08920
GeneTree:ENSGT00390000018393 EMBL:CU468160
Ensembl:ENSSSCT00000017503 Uniprot:F1SMZ9
Length = 1303
Score = 2150 (761.9 bits), Expect = 0., Sum P(3) = 0.
Identities = 413/466 (88%), Positives = 435/466 (93%)
Query: 896 ARLVGASEIINRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAF 955
A VGA+EII+R+VDDLKDE EQYRKMVME+IEK M NLGAADID +LEEQLIDGILYAF
Sbjct: 838 ANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAF 897
Query: 956 QEQTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAV 1015
QEQTTED VMLNGFGT+VN LGKRVKPYLPQICGT+LWRLNNKSAKVRQQAADLISR AV
Sbjct: 898 QEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAV 957
Query: 1016 VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL 1075
VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGM KMTPPIKDLLPRL
Sbjct: 958 VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRL 1017
Query: 1076 TPILKNRHEKVQENCIDLVGRIADR--GPEYVSAREWMRICFXXXXXXKAHKKAIRRATV 1133
TPILKNRHEKVQENCIDLVGRIADR G EYVSAREWMRICF KAHKKAIRRATV
Sbjct: 1018 TPILKNRHEKVQENCIDLVGRIADRIRGAEYVSAREWMRICFELLELLKAHKKAIRRATV 1077
Query: 1134 NTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRV 1193
NTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRV
Sbjct: 1078 NTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRV 1137
Query: 1194 PELNVQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALG 1253
PELNVQNGVLK+LSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTA A ++HM+LG
Sbjct: 1138 PELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLG 1197
Query: 1254 VYGFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHPA 1313
VYGFGCED+L HLLNYVWPN+FETSPH++QA M A+EGLRVA+GP R+LQY LQGLFHPA
Sbjct: 1198 VYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPA 1257
Query: 1314 RKVRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYELDYVL 1359
RKVRDVYWKIYNS+YIG QDALI+ YPRI ND KN Y+RYELDY+L
Sbjct: 1258 RKVRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYIL 1303
Score = 1231 (438.4 bits), Expect = 0., Sum P(3) = 0.
Identities = 241/289 (83%), Positives = 258/289 (89%)
Query: 316 PGYKVLQPPAGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAGYI 375
P + P GH+ +MTPEQ+QA+RWEREIDERNRPL+D+EL+AMFP GYKVL PPAGY+
Sbjct: 360 PAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAGYV 419
Query: 376 PIRTPARKLXXXXXXXXXXXXXFFIQQEDKTAKYMDNQPKGNLPFLKPEDAQYFDKLLVD 435
PIRTPARKL F +Q ED+T K +++QP GNLPFLKP+D QYFDKLLVD
Sbjct: 420 PIRTPARKLTATPTPLGGMTG-FHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLVD 478
Query: 436 VDEDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMS 495
VDE +LSPEE KERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMS
Sbjct: 479 VDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMS 538
Query: 496 PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLA 555
PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLA
Sbjct: 539 PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLA 598
Query: 556 KAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFLKA 604
KAAGLATMISTMRPDIDN+DEYVRNTTARAFAVVASALGIPSLLPFLKA
Sbjct: 599 KAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKA 647
Score = 397 (144.8 bits), Expect = 1.7e-295, Sum P(3) = 1.7e-295
Identities = 89/165 (53%), Positives = 100/165 (60%)
Query: 606 GVTPAATRWDETPGHPKPGAETPGATPSTRLWDXXXXXXXXXXXXXXR------ETPSHD 659
G TP+ RWDETPG K G+ETPGATP +++WD R TP H
Sbjct: 222 GHTPSL-RWDETPGRAK-GSETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHG 279
Query: 660 KAQSSIRRNRWDETPKTERETPGHSSGWAETPKTDRAGPGGDLIQETPTPGGVSSKRRSR 719
A SS R+NRWDETPKTER+TPGH SGWAETP+TDR GGD I ETPTPG +SKR+SR
Sbjct: 280 GATSSARKNRWDETPKTERDTPGHGSGWAETPRTDR---GGDSIGETPTPG--ASKRKSR 334
Query: 720 WDETPQATPSGAMTPSAATPGGMTPSTPI----TPHVGSTPLMTP 760
WDETP A+ G TP TPG TP TP G MTP
Sbjct: 335 WDETP-ASQMGGSTP-VLTPGKTPIGTPAMNMATPTPGHIMSMTP 377
Score = 393 (143.4 bits), Expect = 4.5e-295, Sum P(3) = 4.5e-295
Identities = 111/239 (46%), Positives = 128/239 (53%)
Query: 613 RWDET----PGH-PKP-----GAETPGATPSTRLWDXXXXXXXXXXXXXXRE-------T 655
RWD+T PG PK AETPG TPS R WD T
Sbjct: 196 RWDQTADQTPGATPKKLSSWDQAETPGHTPSLR-WDETPGRAKGSETPGATPGSKIWDPT 254
Query: 656 PSHDKAQSSIRRNRWDETPKTERETPGH----SSG----WAETPKTDRAGPG-GDLIQET 706
PSH A ++ R D TP TPGH SS W ETPKT+R PG G ET
Sbjct: 255 PSHTPAGAATP-GRGD-TPG--HATPGHGGATSSARKNRWDETPKTERDTPGHGSGWAET 310
Query: 707 PTPGGVSSKRRSRWDETPQATPSGAMTPSAATPGGMTPSTPITPHVGSTPLMTPSGVTPT 766
P R R ++ TP TP A+ TP + GSTP++TP G TP
Sbjct: 311 P--------RTDRGGDSIGETP----TPGASKRKSRWDETPASQMGGSTPVLTP-GKTPI 357
Query: 767 GNKAMAMATPTPGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPA 825
G AM MATPTPGH+ +MTPEQ+QA+RWEREIDERNRPL+D+EL+AMFP GYKVL PPA
Sbjct: 358 GTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPA 416
Score = 332 (121.9 bits), Expect = 0., Sum P(3) = 0.
Identities = 88/210 (41%), Positives = 116/210 (55%)
Query: 152 NIEAQIRDIQNRKKDVSEGGGEEKQKRVGLGESGYFDSDIYDGG-GKFEGYVKSIA---- 206
+IEAQIR+IQ +K + E G VGL +GY+D +IY G +F GYV SIA
Sbjct: 6 DIEAQIREIQGKKAALDEAQG------VGLDSTGYYDQEIYGGSDSRFAGYVTSIAATEL 59
Query: 207 -DDDFDYQASFNQ--NKRSGYTAPAALLNDIAQSEKDYDPFADRRQKTVAEKEDEYRAIR 263
DDD DY +S + K+ GY AP ALLNDI QS + YDPFA+ R +A++EDEY+ R
Sbjct: 60 EDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYKKHR 119
Query: 264 RRMIISPERVDPFAEGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQP 323
R MIISPER+DPFA+ TP+ R ++ R + LT +E E K
Sbjct: 120 RTMIISPERLDPFADA--GGKTPDPKMNARTYMDV-MREQHLTKEEREIRQQLAEKA--- 173
Query: 324 PAGHL------AAMTPEQIQAYRWEREIDE 347
AG L AA P + RW++ D+
Sbjct: 174 KAGELKVVNGAAASQPPSKRKRRWDQTADQ 203
Score = 231 (86.4 bits), Expect = 2.7e-268, Sum P(4) = 2.7e-268
Identities = 40/55 (72%), Positives = 49/55 (89%)
Query: 279 GHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAGHLAAMTP 333
GH+ +MTPEQ+QA+RWEREIDERNRPL+D+EL+AMFP GYKVL PPAG++ TP
Sbjct: 370 GHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAGYVPIRTP 424
Score = 176 (67.0 bits), Expect = 1.4e-246, Sum P(3) = 1.4e-246
Identities = 42/108 (38%), Positives = 63/108 (58%)
Query: 1 YIPIRTPARKLXXXXXXXXXXXXXFFIQQEDKTAKYMDNQPKGNLPFLKPEDAQYFDKLL 60
Y+PIRTPARKL F +Q ED+T K +++QP GNLPFLKP+D QYFDKLL
Sbjct: 418 YVPIRTPARKLTATPTPLGGMTG-FHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLL 476
Query: 61 SNGKHCGKTPDVGSRTYAEVMREQL-VRGEEKEVRK----KLQDKAKD 103
+ +P+ + ++M+ L ++ +RK ++ DKA++
Sbjct: 477 VDVDESTLSPE--EQKERKIMKLLLKIKNGTPPMRKAALRQITDKARE 522
Score = 164 (62.8 bits), Expect = 0., Sum P(3) = 0.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 67 GKTPD--VGSRTYAEVMREQLVRGEEKEVRKKLQDKAKDGTLKAVPTNGEAKAAP--KKR 122
GKTPD + +RTY +VMREQ + EE+E+R++L +KAK G LK V NG A + P K++
Sbjct: 137 GKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGELKVV--NGAAASQPPSKRK 194
Query: 123 GRWDQTSD 130
RWDQT+D
Sbjct: 195 RRWDQTAD 202
Score = 123 (48.4 bits), Expect = 1.5e-266, Sum P(3) = 1.5e-266
Identities = 41/93 (44%), Positives = 46/93 (49%)
Query: 664 SIRRNRWDETP-KTERETPGHSSGW--AETP------KTDRAGPGGDLIQETP--TPGGV 712
S R+ RWD+T +T TP S W AETP + D PG ETP TPG
Sbjct: 191 SKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDET-PGRAKGSETPGATPG-- 247
Query: 713 SSKRRSRWDETPQATPSGAMTPSAA-TPGGMTP 744
SK WD TP TP+GA TP TPG TP
Sbjct: 248 -SKI---WDPTPSHTPAGAATPGRGDTPGHATP 276
Score = 90 (36.7 bits), Expect = 2.7e-268, Sum P(4) = 2.7e-268
Identities = 44/183 (24%), Positives = 77/183 (42%)
Query: 436 VDEDSLSPEEAKE-----RKIMKLLLKIKNGTPPMRKAA--LRQITDKAREFGAGPL-FN 487
+DED + E +E K L I P + +R T +A A L
Sbjct: 580 IDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIP 639
Query: 488 QILPLLMSPTLED---QERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYAR 544
+LP L + Q RH +K++ +I + + P++ ++ +IE L+DE R
Sbjct: 640 SLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVR 699
Query: 545 VEGREIISNLAKAA---GLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPF 601
I+ LA+AA G+ + S ++P + + +R + A A+G L+P
Sbjct: 700 TISALAIAALAEAATPYGIESFDSVLKP----LWKGIRQHRGKGLAAFLKAIGY--LIPL 753
Query: 602 LKA 604
+ A
Sbjct: 754 MDA 756
Score = 85 (35.0 bits), Expect = 1.5e-262, Sum P(3) = 1.5e-262
Identities = 26/77 (33%), Positives = 32/77 (41%)
Query: 714 SKRRSRWDETPQATPSGAMTPSAATPGGMTPSTPITPHV--GSTPLMTPSGVTPTGNKAM 771
SKR+ RWD+T TP GA TP + + TP + TP TP
Sbjct: 191 SKRKRRWDQTADQTP-GA-TPKKLSSWDQAETPGHTPSLRWDETPGRAKGSETPGATPGS 248
Query: 772 AMATPTPGHL--AAMTP 786
+ PTP H A TP
Sbjct: 249 KIWDPTPSHTPAGAATP 265
Score = 70 (29.7 bits), Expect = 5.9e-261, Sum P(3) = 5.9e-261
Identities = 36/158 (22%), Positives = 52/158 (32%)
Query: 606 GVTPAATRWDETPGHPKPGAETPGATPSTRLWDXXXXXXXXXXXXXXRETPSHDKAQSSI 665
G + +RWDETP + G TP TP TP H + +
Sbjct: 327 GASKRKSRWDETPAS-QMGGSTPVLTPGK-------TPIGTPAMNMATPTPGHIMSMTPE 378
Query: 666 RRNRWDETPKTERETPGHSSGWAETPKTDRAGPGGDLIQETPTPGGVSSKRRSRWDETPQ 725
+ W + ERE + ++ + D P G + P P G R T
Sbjct: 379 QLQAW----RWEREIDERNRPLSDE-ELDAMFPEGYKV--LPPPAGYVPIRTPARKLTAT 431
Query: 726 ATPSGAMTPSAATPGGMTPSTPITPHVGSTPLMTPSGV 763
TP G MT T + G+ P + P +
Sbjct: 432 PTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDI 469
Score = 67 (28.6 bits), Expect = 1.8e-63, Sum P(4) = 1.8e-63
Identities = 33/167 (19%), Positives = 70/167 (41%)
Query: 1139 IAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPEL-N 1197
+AKA G +++T+ ++ + R T A A+VA ++LP L + +
Sbjct: 597 LAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQ 656
Query: 1198 VQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVYGF 1257
++ +K + + +G ++ ++ ++E L+D R + I +A +
Sbjct: 657 ARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPY 716
Query: 1258 GCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQY 1304
G E + +L +W I + + AF+ A+ G + L Y
Sbjct: 717 GIE-SFDSVLKPLWKGIRQHRGKGLAAFLKAI-GYLIPLMDAEYANY 761
Score = 53 (23.7 bits), Expect = 2.2e-26, Sum P(3) = 2.2e-26
Identities = 24/133 (18%), Positives = 56/133 (42%)
Query: 489 ILPLLMS----PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYAR 544
+LP LM+ P L Q ++K + + + ++ + Y++ + ++E L+D D R
Sbjct: 1127 VLPALMNEYRVPELNVQNG--VLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR 1184
Query: 545 VEGREIISNLAKAA-------GLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPS 597
++ +++ L +++ + P++ +V A + A+G
Sbjct: 1185 QTASAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCR 1244
Query: 598 LLPFLKAGGVTPA 610
+L + G PA
Sbjct: 1245 MLQYCLQGLFHPA 1257
Score = 52 (23.4 bits), Expect = 4.7e-162, Sum P(3) = 4.7e-162
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 915 ENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLID 949
+ YR++V ++E + +GAA+I SR+ + L D
Sbjct: 823 DRRNYRQLVDTTVELA-NKVGAAEIISRIVDDLKD 856
Score = 52 (23.4 bits), Expect = 1.0e-61, Sum P(3) = 1.0e-61
Identities = 16/71 (22%), Positives = 34/71 (47%)
Query: 1183 VLPALMNEYRVPELNVQNG--VLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR 1240
+LP LM+ P L Q ++K + + + ++ + Y++ + ++E L+D D R
Sbjct: 532 ILPLLMS----PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYAR 587
Query: 1241 QTACATIKHMA 1251
I ++A
Sbjct: 588 VEGREIISNLA 598
Score = 51 (23.0 bits), Expect = 3.6e-26, Sum P(3) = 3.6e-26
Identities = 31/141 (21%), Positives = 62/141 (43%)
Query: 469 ALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVR--PYVH 526
AL+ I + P +LP L +P L+++ + ID ++ ++ D +R YV
Sbjct: 993 ALKAIVNVIGMHKMTPPIKDLLPRL-TPILKNRHEKVQENCID-LVGRIADRIRGAEYVS 1050
Query: 527 K---ILVVIEPLLIDEDYYARVEGREI--ISNLAKAAGLATMISTMRPDIDNIDEYVRNT 581
+ + E L + + + + + +AKA G +++T+ ++ + R
Sbjct: 1051 AREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVC 1110
Query: 582 TARAFAVVASALGIPSLLPFL 602
T A A+VA ++LP L
Sbjct: 1111 TTVAIAIVAETCSPFTVLPAL 1131
Score = 50 (22.7 bits), Expect = 1.8e-63, Sum P(4) = 1.8e-63
Identities = 23/110 (20%), Positives = 50/110 (45%)
Query: 905 INRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAFQEQTTEDVV 964
I +++ +K+ RK + I GA + +++ L+ L ++Q E +
Sbjct: 494 IMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTL---EDQ--ERHL 548
Query: 965 MLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIA 1014
++ I+ +L V+PY+ +I I L ++ R + ++IS +A
Sbjct: 549 LVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLA 598
Score = 45 (20.9 bits), Expect = 0., Sum P(3) = 0.
Identities = 9/19 (47%), Positives = 9/19 (47%)
Query: 117 AAPKKRGRWDQTSDGDVTP 135
A PKK WDQ TP
Sbjct: 207 ATPKKLSSWDQAETPGHTP 225
Score = 45 (20.9 bits), Expect = 0., Sum P(3) = 0.
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 99 DKAKDGTLKAVPTNGEAKAAPKKRGRWDQT 128
D+ D ++ PT G A K++ RWD+T
Sbjct: 314 DRGGD-SIGETPTPG----ASKRKSRWDET 338
Score = 45 (20.9 bits), Expect = 1.5e-263, Sum P(4) = 1.5e-263
Identities = 26/125 (20%), Positives = 56/125 (44%)
Query: 418 LPFLKPEDAQYFDK--LLVDVDEDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQ--I 473
+P + E A Y+ + +L+ + E SP+E ++ ++K++ K GT + ++ +
Sbjct: 751 IPLMDAEYANYYTREVMLILIREFQ-SPDEEMKKIVLKVV-KQCCGTDGVEANYIKTEIL 808
Query: 474 TDKAREFGAG--PLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVV 531
+ F L + L+ T+E + ++I RI+ L D Y ++
Sbjct: 809 PPFFKHFWQHRMALDRRNYRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMET 868
Query: 532 IEPLL 536
IE ++
Sbjct: 869 IEKIM 873
Score = 45 (20.9 bits), Expect = 1.5e-25, Sum P(3) = 1.5e-25
Identities = 26/128 (20%), Positives = 55/128 (42%)
Query: 433 LVDVDEDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPL 492
LVD + + A E I +++ +K+ RK + I GA + +++
Sbjct: 830 LVDTTVELANKVGAAEI-ISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQ 888
Query: 493 LMSPTL---EDQ--ERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEG 547
L+ L ++Q E +++ ++ L V+PY+ +I + L ++ R +
Sbjct: 889 LIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQA 948
Query: 548 REIISNLA 555
++IS A
Sbjct: 949 ADLISRTA 956
Score = 40 (19.1 bits), Expect = 8.8e-258, Sum P(3) = 8.8e-258
Identities = 14/34 (41%), Positives = 16/34 (47%)
Query: 600 PFLKAGGVTPAATRWDETP-GHPKPGAETPGATP 632
P + GG TP T +TP G P TP TP
Sbjct: 339 PASQMGGSTPVLTP-GKTPIGTPAMNMATP--TP 369
Score = 38 (18.4 bits), Expect = 1.9e-264, Sum P(3) = 1.9e-264
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 569 PDI-DNIDEYVRNTTARAFAVVASALGIPSLL-PFLKAGGVTP 609
P I D DEY ++ R +++ P L PF AGG TP
Sbjct: 106 PKIADREDEYKKH---RRTMIIS-----PERLDPFADAGGKTP 140
Score = 38 (18.4 bits), Expect = 1.4e-160, Sum P(3) = 1.4e-160
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 1128 IRRATVNTFGYIAKAIGPHDVLATL 1152
+R T F +A A+G +L L
Sbjct: 621 VRNTTARAFAVVASALGIPSLLPFL 645
>ZFIN|ZDB-GENE-040827-3 [details] [associations]
symbol:sf3b1 "splicing factor 3b, subunit 1"
species:7955 "Danio rerio" [GO:0030318 "melanocyte differentiation"
evidence=IGI;IMP] [GO:0014032 "neural crest cell development"
evidence=IMP] [GO:0042981 "regulation of apoptotic process"
evidence=IGI] InterPro:IPR016024 ZFIN:ZDB-GENE-040827-3
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042981
GO:GO:0014032 GO:GO:0030318 CTD:23451 KO:K12828 InterPro:IPR015016
Pfam:PF08920 GeneTree:ENSGT00390000018393 EMBL:BX530407
IPI:IPI00489117 RefSeq:XP_684311.1 UniGene:Dr.32149
Ensembl:ENSDART00000129140 GeneID:446117 KEGG:dre:446117
NextBio:20832227 ArrayExpress:F1QGM7 Bgee:F1QGM7 Uniprot:F1QGM7
Length = 1315
Score = 2142 (759.1 bits), Expect = 0., Sum P(3) = 0.
Identities = 411/464 (88%), Positives = 433/464 (93%)
Query: 896 ARLVGASEIINRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAF 955
A VGA+EII+R+VDDLKDE EQYRKMVME+IEK M NLGAADID +LEEQLIDGILYAF
Sbjct: 852 ANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAF 911
Query: 956 QEQTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAV 1015
QEQTTED VMLNGFGT+VN LGKRVKPYLPQICGT+LWRLNNKSAKVRQQAADLISR AV
Sbjct: 912 QEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAV 971
Query: 1016 VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL 1075
VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGM KMTPPIKDLLPRL
Sbjct: 972 VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRL 1031
Query: 1076 TPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFXXXXXXKAHKKAIRRATVNT 1135
TPILKNRHEKVQENCIDLVGRIADRG EYVSAREWMRICF KAHKKAIRRATVNT
Sbjct: 1032 TPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNT 1091
Query: 1136 FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE 1195
FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE
Sbjct: 1092 FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE 1151
Query: 1196 LNVQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVY 1255
LNVQNGVLK+LSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTA A ++HM+LGVY
Sbjct: 1152 LNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVY 1211
Query: 1256 GFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHPARK 1315
GFGCED+L HLLNYVWPN+FETSPH++QA M A+EGLRVA+GP R+LQY LQGLFHPARK
Sbjct: 1212 GFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARK 1271
Query: 1316 VRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYELDYVL 1359
VRDVYWKIYNS+YIG QDALI+ YP I ND KN Y+RYEL+Y L
Sbjct: 1272 VRDVYWKIYNSIYIGSQDALIAHYPLIFNDEKNSYVRYELEYFL 1315
Score = 1230 (438.0 bits), Expect = 0., Sum P(3) = 0.
Identities = 241/289 (83%), Positives = 258/289 (89%)
Query: 316 PGYKVLQPPAGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAGYI 375
P + P GHL +MTPEQ+QA+RWEREIDERNRPLTD+EL+AMFP GYKVL PPAGY+
Sbjct: 374 PAMNMATPTPGHLMSMTPEQLQAWRWEREIDERNRPLTDEELDAMFPEGYKVLPPPAGYV 433
Query: 376 PIRTPARKLXXXXXXXXXXXXXFFIQQEDKTAKYMDNQPKGNLPFLKPEDAQYFDKLLVD 435
PIRTPARKL F +Q ED++ K +++QP GNLPFLKP+D QYFDKLLV+
Sbjct: 434 PIRTPARKLAATPTPIGGMTG-FHMQTEDRSMKQVNDQPSGNLPFLKPDDIQYFDKLLVE 492
Query: 436 VDEDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMS 495
VDE +LSPEE KERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMS
Sbjct: 493 VDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMS 552
Query: 496 PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLA 555
PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLA
Sbjct: 553 PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLA 612
Query: 556 KAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFLKA 604
KAAGLATMISTMRPDIDN+DEYVRNTTARAFAVVASALGIPSLLPFLKA
Sbjct: 613 KAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKA 661
Score = 421 (153.3 bits), Expect = 1.3e-295, Sum P(3) = 1.3e-295
Identities = 90/164 (54%), Positives = 105/164 (64%)
Query: 606 GVTPAATRWDETPGHPKPGAETPGATPSTRLWDXXXXXXXXXXXXXXRETPSHDK----- 660
G TP+ +RWDETPG PK G+ETPGATPSTR+W+ R+TP H
Sbjct: 236 GHTPSNSRWDETPGRPK-GSETPGATPSTRMWEPTPSHTPAGAATPGRDTPGHATPGHGG 294
Query: 661 AQSSIRRNRWDETPKTERETPGHSSGWAETPKTDRAGPGGDLIQETPTPGGVSSKRRSRW 720
A SS+R+NRWDETPKTERETPGH SGWAETP+TDR G + + ETPTPG +SKR+SRW
Sbjct: 295 ATSSVRKNRWDETPKTERETPGHGSGWAETPRTDR---GDESVGETPTPG--ASKRKSRW 349
Query: 721 DETPQATPSGAMTPSAATPGGMTPSTPI----TPHVGSTPLMTP 760
DETP A+ G+ TP TPG TP TP G MTP
Sbjct: 350 DETP-ASQMGSSTP-LLTPGKTPLGTPAMNMATPTPGHLMSMTP 391
Score = 410 (149.4 bits), Expect = 1.9e-294, Sum P(3) = 1.9e-294
Identities = 106/235 (45%), Positives = 122/235 (51%)
Query: 608 TPA-ATRWDETPGHPKPGAETPGATPSTRLWDXX----XXXXXXXXXXXXR---ETPSHD 659
TP + WD+ G + TPG TPS WD R TPSH
Sbjct: 214 TPKKVSSWDQADGGSETPGHTPGHTPSNSRWDETPGRPKGSETPGATPSTRMWEPTPSHT 273
Query: 660 KAQSSIRRNRWDETPKTERETPGHSSG--------WAETPKTDRAGPG-GDLIQETPTPG 710
A ++ +TP TPGH W ETPKT+R PG G ETP
Sbjct: 274 PAGAATPGR---DTPG--HATPGHGGATSSVRKNRWDETPKTERETPGHGSGWAETP--- 325
Query: 711 GVSSKRRSRWDETPQATPSGAMTPSAATPGGMTPSTPITPHVGSTPLMTPSGVTPTGNKA 770
R R DE+ TP TP A+ TP + STPL+TP G TP G A
Sbjct: 326 -----RTDRGDESVGETP----TPGASKRKSRWDETPASQMGSSTPLLTP-GKTPLGTPA 375
Query: 771 MAMATPTPGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPA 825
M MATPTPGHL +MTPEQ+QA+RWEREIDERNRPLTD+EL+AMFP GYKVL PPA
Sbjct: 376 MNMATPTPGHLMSMTPEQLQAWRWEREIDERNRPLTDEELDAMFPEGYKVLPPPA 430
Score = 317 (116.6 bits), Expect = 0., Sum P(3) = 0.
Identities = 76/206 (36%), Positives = 116/206 (56%)
Query: 152 NIEAQIRDIQNRKKDVSEGGGEEKQKRVGLGESGYFDSDIYDGG-GKFEGYVKSIA---- 206
+IEAQI +IQ +K + GG++ VGL +GY+D +IY G +F+GY+ SIA
Sbjct: 10 DIEAQILEIQGKKAALVVEGGDQG---VGLDSTGYYDQEIYGGSDSRFDGYLTSIAANEQ 66
Query: 207 --DDDFDYQASFNQNKRSGYTAPAALLNDIAQSEKDYDPFADRRQKTVAEKEDEYRAIRR 264
DDD D S K+ GY AP A+LN I QS++ YDPFA+ R + ++++EDEY+ R+
Sbjct: 67 EDDDDEDSSTSLLVQKKPGYHAPVAILNSIPQSDEQYDPFAEHRPQKISDREDEYKKRRQ 126
Query: 265 RMIISPERVDPFAEGHLAAMTPEQIQAYR---WEREIDERNRPLTDDELEAMFPPGYKVL 321
+MIISPER DPFA+G Q++ Y E+++ + R + +E K +
Sbjct: 127 KMIISPERHDPFADGGKTPDPKVQVRTYMDVMKEQQLSKEEREIRLQMVEKAKAGELKAV 186
Query: 322 QPPAGHLAAMTPEQIQAYRWEREIDE 347
A AA ++ RW++ D+
Sbjct: 187 NGSAASQAAAKRKR----RWDQTADQ 208
Score = 237 (88.5 bits), Expect = 4.5e-268, Sum P(4) = 4.5e-268
Identities = 42/55 (76%), Positives = 49/55 (89%)
Query: 279 GHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAGHLAAMTP 333
GHL +MTPEQ+QA+RWEREIDERNRPLTD+EL+AMFP GYKVL PPAG++ TP
Sbjct: 384 GHLMSMTPEQLQAWRWEREIDERNRPLTDEELDAMFPEGYKVLPPPAGYVPIRTP 438
Score = 172 (65.6 bits), Expect = 2.5e-245, Sum P(3) = 2.5e-245
Identities = 41/108 (37%), Positives = 62/108 (57%)
Query: 1 YIPIRTPARKLXXXXXXXXXXXXXFFIQQEDKTAKYMDNQPKGNLPFLKPEDAQYFDKLL 60
Y+PIRTPARKL F +Q ED++ K +++QP GNLPFLKP+D QYFDKLL
Sbjct: 432 YVPIRTPARKLAATPTPIGGMTG-FHMQTEDRSMKQVNDQPSGNLPFLKPDDIQYFDKLL 490
Query: 61 SNGKHCGKTPDVGSRTYAEVMREQL-VRGEEKEVRK----KLQDKAKD 103
+P+ + ++M+ L ++ +RK ++ DKA++
Sbjct: 491 VEVDESTLSPE--EQKERKIMKLLLKIKNGTPPMRKAALRQITDKARE 536
Score = 164 (62.8 bits), Expect = 0., Sum P(3) = 0.
Identities = 34/66 (51%), Positives = 48/66 (72%)
Query: 67 GKTPD--VGSRTYAEVMREQLVRGEEKEVRKKLQDKAKDGTLKAVPTNGEAKAAPKKRGR 124
GKTPD V RTY +VM+EQ + EE+E+R ++ +KAK G LKAV + ++AA K++ R
Sbjct: 142 GKTPDPKVQVRTYMDVMKEQQLSKEEREIRLQMVEKAKAGELKAVNGSAASQAAAKRKRR 201
Query: 125 WDQTSD 130
WDQT+D
Sbjct: 202 WDQTAD 207
Score = 129 (50.5 bits), Expect = 9.4e-265, Sum P(3) = 9.4e-265
Identities = 33/91 (36%), Positives = 44/91 (48%)
Query: 654 ETPSHDKAQSSIRRNRWDETPKTERETPGHSSGWAETPKTDRAGPGGDLIQETPTPGGVS 713
+TPS+ + + + WD+ ETPGH+ G TP R + + TPG
Sbjct: 208 QTPSNSTPK---KVSSWDQADGGS-ETPGHTPG--HTPSNSRWDETPGRPKGSETPGATP 261
Query: 714 SKRRSRWDETPQATPSGAMTPSAATPGGMTP 744
S R W+ TP TP+GA TP TPG TP
Sbjct: 262 STRM--WEPTPSHTPAGAATPGRDTPGHATP 290
Score = 128 (50.1 bits), Expect = 1.2e-264, Sum P(3) = 1.2e-264
Identities = 42/104 (40%), Positives = 49/104 (47%)
Query: 666 RRNRWDETPKTERETPGHSSGWAETPKTDRAGPGGDLIQETP--TPGGVSSKRRSRWDET 723
R+ RWD+T +TP +S TPK + D ETP TPG S SRWDET
Sbjct: 198 RKRRWDQTAD---QTPSNS-----TPKKVSSWDQADGGSETPGHTPGHTPSN--SRWDET 247
Query: 724 PQATPSGAMTPSAATPGGMTPSTPI-TPHVGSTPLM-TPSGVTP 765
P P G+ TP A M TP TP +TP TP TP
Sbjct: 248 P-GRPKGSETPGATPSTRMWEPTPSHTPAGAATPGRDTPGHATP 290
Score = 94 (38.1 bits), Expect = 4.7e-261, Sum P(3) = 4.7e-261
Identities = 41/113 (36%), Positives = 49/113 (43%)
Query: 708 TPGGVSSKRRSRWD------ETPQATPSGAMTPSAA----TPG---GM-TP-STPITPHV 752
TP + K+ S WD ETP TP TPS + TPG G TP +TP T
Sbjct: 209 TPSNSTPKKVSSWDQADGGSETPGHTPGH--TPSNSRWDETPGRPKGSETPGATPSTRMW 266
Query: 753 GSTPLMTPSGVTPTGNKAMAMATPTPGHLAAMTPEQIQAYRW-EREIDERNRP 804
TP TP+G G ATP GH A + ++ RW E ER P
Sbjct: 267 EPTPSHTPAGAATPGRDTPGHATP--GHGGATS--SVRKNRWDETPKTERETP 315
Score = 90 (36.7 bits), Expect = 4.5e-268, Sum P(4) = 4.5e-268
Identities = 44/183 (24%), Positives = 77/183 (42%)
Query: 436 VDEDSLSPEEAKE-----RKIMKLLLKIKNGTPPMRKAA--LRQITDKAREFGAGPL-FN 487
+DED + E +E K L I P + +R T +A A L
Sbjct: 594 IDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIP 653
Query: 488 QILPLLMSPTLED---QERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYAR 544
+LP L + Q RH +K++ +I + + P++ ++ +IE L+DE R
Sbjct: 654 SLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVR 713
Query: 545 VEGREIISNLAKAA---GLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPF 601
I+ LA+AA G+ + S ++P + + +R + A A+G L+P
Sbjct: 714 TISALAIAALAEAATPYGIESFDSVLKP----LWKGIRQHRGKGLAAFLKAIGY--LIPL 767
Query: 602 LKA 604
+ A
Sbjct: 768 MDA 770
Score = 89 (36.4 bits), Expect = 1.6e-260, Sum P(3) = 1.6e-260
Identities = 28/87 (32%), Positives = 35/87 (40%)
Query: 713 SSKRRSRWDETPQATPSGAMTPS-----------AATPGGMTPSTPITPHVGSTPLMTPS 761
++KR+ RWD+T TPS + TP + TPG TP TP
Sbjct: 195 AAKRKRRWDQTADQTPSNS-TPKKVSSWDQADGGSETPGHTPGHTPSNSRWDETPGRPKG 253
Query: 762 GVTPTGNKAMAMATPTPGHL--AAMTP 786
TP + M PTP H A TP
Sbjct: 254 SETPGATPSTRMWEPTPSHTPAGAATP 280
Score = 67 (28.6 bits), Expect = 1.5e-64, Sum P(4) = 1.5e-64
Identities = 33/167 (19%), Positives = 70/167 (41%)
Query: 1139 IAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPEL-N 1197
+AKA G +++T+ ++ + R T A A+VA ++LP L + +
Sbjct: 611 LAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQ 670
Query: 1198 VQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVYGF 1257
++ +K + + +G ++ ++ ++E L+D R + I +A +
Sbjct: 671 ARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPY 730
Query: 1258 GCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQY 1304
G E + +L +W I + + AF+ A+ G + L Y
Sbjct: 731 GIE-SFDSVLKPLWKGIRQHRGKGLAAFLKAI-GYLIPLMDAEYANY 775
Score = 58 (25.5 bits), Expect = 0., Sum P(3) = 0.
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 94 RKKLQDKAKDGTLKAVPTNGEAKAAPKKRGRWDQTSDGDVTP 135
RK+ D+ D T P+N + PKK WDQ G TP
Sbjct: 198 RKRRWDQTADQT----PSN----STPKKVSSWDQADGGSETP 231
Score = 53 (23.7 bits), Expect = 5.2e-27, Sum P(3) = 5.2e-27
Identities = 24/133 (18%), Positives = 56/133 (42%)
Query: 489 ILPLLMS----PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYAR 544
+LP LM+ P L Q ++K + + + ++ + Y++ + ++E L+D D R
Sbjct: 1139 VLPALMNEYRVPELNVQNG--VLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR 1196
Query: 545 VEGREIISNLAKAA-------GLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPS 597
++ +++ L +++ + P++ +V A + A+G
Sbjct: 1197 QTASAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCR 1256
Query: 598 LLPFLKAGGVTPA 610
+L + G PA
Sbjct: 1257 MLQYCLQGLFHPA 1269
Score = 52 (23.4 bits), Expect = 2.3e-160, Sum P(3) = 2.3e-160
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 915 ENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLID 949
+ YR++V ++E + +GAA+I SR+ + L D
Sbjct: 837 DRRNYRQLVDTTVELA-NKVGAAEIISRIVDDLKD 870
Score = 52 (23.4 bits), Expect = 9.3e-63, Sum P(3) = 9.3e-63
Identities = 16/71 (22%), Positives = 34/71 (47%)
Query: 1183 VLPALMNEYRVPELNVQNG--VLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR 1240
+LP LM+ P L Q ++K + + + ++ + Y++ + ++E L+D D R
Sbjct: 546 ILPLLMS----PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYAR 601
Query: 1241 QTACATIKHMA 1251
I ++A
Sbjct: 602 VEGREIISNLA 612
Score = 50 (22.7 bits), Expect = 1.5e-64, Sum P(4) = 1.5e-64
Identities = 23/110 (20%), Positives = 50/110 (45%)
Query: 905 INRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAFQEQTTEDVV 964
I +++ +K+ RK + I GA + +++ L+ L ++Q E +
Sbjct: 508 IMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTL---EDQ--ERHL 562
Query: 965 MLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIA 1014
++ I+ +L V+PY+ +I I L ++ R + ++IS +A
Sbjct: 563 LVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLA 612
Score = 50 (22.7 bits), Expect = 1.1e-26, Sum P(3) = 1.1e-26
Identities = 30/139 (21%), Positives = 60/139 (43%)
Query: 469 ALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHK- 527
AL+ I + P +LP L +P L+++ + ID ++ ++ D YV
Sbjct: 1007 ALKAIVNVIGMHKMTPPIKDLLPRL-TPILKNRHEKVQENCID-LVGRIADRGAEYVSAR 1064
Query: 528 --ILVVIEPLLIDEDYYARVEGREI--ISNLAKAAGLATMISTMRPDIDNIDEYVRNTTA 583
+ + E L + + + + + +AKA G +++T+ ++ + R T
Sbjct: 1065 EWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTT 1124
Query: 584 RAFAVVASALGIPSLLPFL 602
A A+VA ++LP L
Sbjct: 1125 VAIAIVAETCSPFTVLPAL 1143
Score = 48 (22.0 bits), Expect = 0., Sum P(3) = 0.
Identities = 17/65 (26%), Positives = 27/65 (41%)
Query: 65 HCGKTPDVGSRTYAEVMR-EQLVRGEEKEVRKKLQDKAKDGTLKAVPTNGEAKAAPKKRG 123
H G T V + E + E+ G + + D ++ PT G A K++
Sbjct: 292 HGGATSSVRKNRWDETPKTERETPGHGSGWAETPRTDRGDESVGETPTPG----ASKRKS 347
Query: 124 RWDQT 128
RWD+T
Sbjct: 348 RWDET 352
Score = 45 (20.9 bits), Expect = 3.5e-26, Sum P(3) = 3.5e-26
Identities = 26/128 (20%), Positives = 55/128 (42%)
Query: 433 LVDVDEDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPL 492
LVD + + A E I +++ +K+ RK + I GA + +++
Sbjct: 844 LVDTTVELANKVGAAEI-ISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQ 902
Query: 493 LMSPTL---EDQ--ERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEG 547
L+ L ++Q E +++ ++ L V+PY+ +I + L ++ R +
Sbjct: 903 LIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQA 962
Query: 548 REIISNLA 555
++IS A
Sbjct: 963 ADLISRTA 970
Score = 38 (18.4 bits), Expect = 6.8e-159, Sum P(3) = 6.8e-159
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 1128 IRRATVNTFGYIAKAIGPHDVLATL 1152
+R T F +A A+G +L L
Sbjct: 635 VRNTTARAFAVVASALGIPSLLPFL 659
>TAIR|locus:2173333 [details] [associations]
symbol:AT5G64270 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006397 "mRNA processing"
evidence=ISS] [GO:0009507 "chloroplast" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] InterPro:IPR016024 EMBL:CP002688
GO:GO:0009507 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
InterPro:IPR021133 PROSITE:PS50077 EMBL:AB008268
HOGENOM:HOG000166737 KO:K12828 OMA:GVEAQYI InterPro:IPR015016
Pfam:PF08920 IPI:IPI00547640 RefSeq:NP_201232.1 UniGene:At.7385
ProteinModelPortal:Q9FMF9 SMR:Q9FMF9 IntAct:Q9FMF9 STRING:Q9FMF9
PRIDE:Q9FMF9 EnsemblPlants:AT5G64270.1 GeneID:836548
KEGG:ath:AT5G64270 TAIR:At5g64270 InParanoid:Q9FMF9
PhylomeDB:Q9FMF9 ProtClustDB:CLSN2686249 Genevestigator:Q9FMF9
Uniprot:Q9FMF9
Length = 1269
Score = 2009 (712.3 bits), Expect = 0., Sum P(3) = 0.
Identities = 387/479 (80%), Positives = 429/479 (89%)
Query: 878 KRDYTLENGIQKTIKGKPARLVGASEIINRVVDDLKDENEQYRKMVMESIEKTMSNLGAA 937
+R+Y + ++ T++ A VG ++I+ RVV+DLKDE+EQYR+MVME+I+K ++NLGA+
Sbjct: 791 RRNY--KQLVETTVE--VANKVGVADIVGRVVEDLKDESEQYRRMVMETIDKVVTNLGAS 846
Query: 938 DIDSRLEEQLIDGILYAFQEQTTEDV-VMLNGFGTIVNQLGKRVKPYLPQICGTILWRLN 996
DID+RLEE LIDGILYAFQEQT++D VMLNGFG +VN LG+RVKPYLPQICGTI WRLN
Sbjct: 847 DIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPYLPQICGTIKWRLN 906
Query: 997 NKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIV 1056
NKSAKVRQQAADLISRIAVVMK C EE+LMGHLGVVLYEYLGEEYPEVLGSILGALKAIV
Sbjct: 907 NKSAKVRQQAADLISRIAVVMKQCGEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIV 966
Query: 1057 NVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFX 1116
NVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRG E+V AREWMRICF
Sbjct: 967 NVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFE 1026
Query: 1117 XXXXXKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAE 1176
KAHKK IRRATVNTFGYIAKAIGP DVLATLLNNLKVQERQNRVCTTVAIAIVAE
Sbjct: 1027 LLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAE 1086
Query: 1177 TCSPFTVLPALMNEYRVPELNVQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRD 1236
TCSPFTVLPALMNEYRVPELNVQNGVLK+LSFLFEYIGEMGKDYIYAVTPLLEDALMDRD
Sbjct: 1087 TCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRD 1146
Query: 1237 LVHRQTACATIKHMALGVYGFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVAL 1296
LVHRQTA + +KHMALGV G GCEDAL HLLN++WPNIFETSPH++ A M+A+EG+RVAL
Sbjct: 1147 LVHRQTAASAVKHMALGVAGLGCEDALVHLLNFIWPNIFETSPHVINAVMEAIEGMRVAL 1206
Query: 1297 GPVRILQYVLQGLFHPARKVRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYEL 1355
G IL Y LQGLFHPARKVR+VYWKIYNSLYIG QD L++AYP ++++ NVY R EL
Sbjct: 1207 GAAVILNYCLQGLFHPARKVREVYWKIYNSLYIGAQDTLVAAYPVLEDEQNNVYSRPEL 1265
Score = 1044 (372.6 bits), Expect = 0., Sum P(3) = 0.
Identities = 221/338 (65%), Positives = 255/338 (75%)
Query: 281 LAAMTPEQIQAYRWEREIDERNR--PLTDDELEAMFPPGYKVL------QPPAGHL---A 329
LA TP++ Q RW+ P+ A + PG + P G L
Sbjct: 281 LATPTPKR-QRSRWDETPATMGSATPMGGVTPGAAYTPGVTPIGGIDMATPTPGQLIFRG 339
Query: 330 AMTPEQIQAYRWEREIDERNRPLTDDELEAMFPP-GYKVLQPPAGYIPIRTPARKLXXXX 388
MTPEQ+ RWE++I+ERNRPL+D+EL+AMFP GYKVL PPA Y+PIRTPARKL
Sbjct: 340 PMTPEQLNMQRWEKDIEERNRPLSDEELDAMFPKDGYKVLDPPATYVPIRTPARKLQQTP 399
Query: 389 XXXXXXXXXFFIQQEDKTAKYMDNQPK--GNLPFLKPEDAQYFDKLLVDVDEDSLSPEEA 446
+ I +E++ +Y D P+ G LPF+KPED QYF LL + +E+ LSPEE
Sbjct: 400 TPMATPG--YVIPEENRGQQY-DVPPEVPGGLPFMKPEDYQYFGSLLNEENEEELSPEEQ 456
Query: 447 KERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLL 506
KERKIMKLLLK+KNGTPP RK ALRQ+TDKARE GAGPLFN+ILPLLM PTLEDQERHLL
Sbjct: 457 KERKIMKLLLKVKNGTPPQRKTALRQLTDKARELGAGPLFNKILPLLMQPTLEDQERHLL 516
Query: 507 VKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMIST 566
VKVIDRILYKLD++VRPYVHKILVVIEPLLIDEDYYARVEGREIISNL+KAAGLA+MI+
Sbjct: 517 VKVIDRILYKLDEMVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLASMIAA 576
Query: 567 MRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFLKA 604
MRPDIDNIDEYVRNTTARAF+VVASALGIP+LLPFLKA
Sbjct: 577 MRPDIDNIDEYVRNTTARAFSVVASALGIPALLPFLKA 614
Score = 305 (112.4 bits), Expect = 3.9e-253, Sum P(3) = 3.9e-253
Identities = 92/240 (38%), Positives = 117/240 (48%)
Query: 610 AATRWDETPGHPKPGAETPGATPSTRLWDXXXXXXXXXXXXXXRETPSHDKAQSSIRRNR 669
AA + + P P + + ++ WD + D ++ R
Sbjct: 167 AAAKHQKDSAPPPPASSSSSSSKRRHRWDLPEEDGAAAKKAKAASS-DWDLPDAAPGIGR 225
Query: 670 WDE-TP-KTERETP--GHSSGWAETPKTDR-----AGPGGDLIQETP--TPGGVS----- 713
WD TP + TP G + W ETP R A PGG + TP TP GV+
Sbjct: 226 WDAPTPGRVSDATPSAGRRNRWDETPTPGRVTDSDATPGGGV---TPGATPSGVTWDGLA 282
Query: 714 ----SKRRSRWDETPQATPSGAMTPSAATPGGMTPSTPITPHVGSTPLMTPSGVTPTGNK 769
++RSRWDETP AT G+ TP GG+TP TP GVTP G
Sbjct: 283 TPTPKRQRSRWDETP-AT-MGSATPM----GGVTPGAAYTP-----------GVTPIGG- 324
Query: 770 AMAMATPTPGHL---AAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPP-GYKVLQPPA 825
+ MATPTPG L MTPEQ+ RWE++I+ERNRPL+D+EL+AMFP GYKVL PPA
Sbjct: 325 -IDMATPTPGQLIFRGPMTPEQLNMQRWEKDIEERNRPLSDEELDAMFPKDGYKVLDPPA 383
Score = 164 (62.8 bits), Expect = 0., Sum P(3) = 0.
Identities = 41/112 (36%), Positives = 62/112 (55%)
Query: 187 FDSDIYDGGGKFEGYVKSIA---DDD--FDYQASFNQNKRSGYTAPAALLNDIAQSEKDY 241
FD D+Y GG Y SIA +DD D S + + YTAP ++LND+A+ +
Sbjct: 30 FDRDLY-GGNDRASYSTSIAPNEEDDANLDTTGSLVAQRLASYTAPRSILNDVARPHNED 88
Query: 242 DPFADRRQKTVAEKEDEYRAIRRRMIISPERVDPFAEGHLAAMTPE-QIQAY 292
D + ++++AE+E EYR R ++SP+RVD FA G TP+ ++ Y
Sbjct: 89 DDVGFKPRQSIAEREGEYRNRRLNRVLSPDRVDAFAMGD---KTPDASVRTY 137
Score = 124 (48.7 bits), Expect = 2.9e-225, Sum P(3) = 2.9e-225
Identities = 35/108 (32%), Positives = 54/108 (50%)
Query: 1 YIPIRTPARKLXXXXXXXXXXXXXFFIQQEDKTAKYMDNQPK--GNLPFLKPEDAQYFDK 58
Y+PIRTPARKL + I +E++ +Y D P+ G LPF+KPED QYF
Sbjct: 385 YVPIRTPARKLQQTPTPMATPG--YVIPEENRGQQY-DVPPEVPGGLPFMKPEDYQYFGS 441
Query: 59 LLSNGKHCGKTPDVGSRTYAEVMREQLVRG---EEKEVRKKLQDKAKD 103
LL+ +P+ + ++ G + K ++L DKA++
Sbjct: 442 LLNEENEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKARE 489
Score = 103 (41.3 bits), Expect = 8.3e-232, Sum P(3) = 8.3e-232
Identities = 71/235 (30%), Positives = 85/235 (36%)
Query: 603 KAGGVTPAA---TRWDETP--GH-----PKPGAE-TPGATPSTRLWDXXXXXXXXXXXXX 651
+ TP+A RWDETP G PG TPGATPS WD
Sbjct: 233 RVSDATPSAGRRNRWDETPTPGRVTDSDATPGGGVTPGATPSGVTWDGLATPTPKRQRSR 292
Query: 652 XRETPSHDKAQSSIRRNRWDETPKTERETPGHSSGWAETP--KTDRAGPG-GDLIQETP- 707
ETP+ TP TPG + TP D A P G LI P
Sbjct: 293 WDETPA----------TMGSATPMGG-VTPGAAYTPGVTPIGGIDMATPTPGQLIFRGPM 341
Query: 708 TPGGVSSKRRSRWDETPQATPSG----AMTPSAATPGGMTPST--PI-TP----HVGSTP 756
TP ++ +R + E S AM P P+T PI TP TP
Sbjct: 342 TPEQLNMQRWEKDIEERNRPLSDEELDAMFPKDGYKVLDPPATYVPIRTPARKLQQTPTP 401
Query: 757 LMTPSGVTPTGNKAMAMATP--TPGHLAAMTPEQIQAYRWEREIDERNRPLTDDE 809
+ TP V P N+ P PG L M PE Q Y +E L+ +E
Sbjct: 402 MATPGYVIPEENRGQQYDVPPEVPGGLPFMKPEDYQ-YFGSLLNEENEEELSPEE 455
Score = 94 (38.1 bits), Expect = 4.5e-129, Sum P(3) = 4.5e-129
Identities = 65/338 (19%), Positives = 145/338 (42%)
Query: 976 LGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYE 1035
+G V P+L + I L++++ KVR A ++ +A E L L++
Sbjct: 639 IGCAVLPHLRSLVEIIEHGLSDENQKVRTITALSLAALAEAAAPYGIESFDSVLKP-LWK 697
Query: 1036 YLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVG 1095
+ +VL + L A+ I+ ++ + K+++ L ++ E++++ + +V
Sbjct: 698 GIRSHRGKVLAAFLKAIGFIIPLMDAIYASYYTKEVMVILIREFQSPDEEMKKIVLKVVK 757
Query: 1096 R-IADRG--PEYVSAREWMRICFXXXXXXK-AHKKAIRRATVNTFGYIAKAIGPHDVLAT 1151
+ ++ G PEY+ + + + F K A ++ + V T +A +G D++
Sbjct: 758 QCVSTEGVEPEYIRS-DILPEFFRNFWTRKMALERRNYKQLVETTVEVANKVGVADIVGR 816
Query: 1152 LLNNLKVQERQNR--VCTTVAIAIVAETCSPFTV-LPALMNE---YRVPELNVQ--NGVL 1203
++ +LK + Q R V T+ + S L L+ + Y E N +L
Sbjct: 817 VVEDLKDESEQYRRMVMETIDKVVTNLGASDIDARLEELLIDGILYAFQEQTSDDANVML 876
Query: 1204 KALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVYGFGCEDAL 1263
+ +G+ K Y+ + ++ L ++ RQ A I +A+ + G E +
Sbjct: 877 NGFGAVVNALGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCGEEQLM 936
Query: 1264 THLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRI 1301
HL ++ + E P ++ + + A++ + +G ++
Sbjct: 937 GHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKM 974
Score = 86 (35.3 bits), Expect = 0., Sum P(3) = 0.
Identities = 35/147 (23%), Positives = 49/147 (33%)
Query: 68 KTPDVGSRTYAEVMREQLVRGEEKEVRKKLQDKAKDGTLKAV---------PTNGEAKAA 118
KTPD RTY + MRE ++ E++E + + K K+ A P + ++
Sbjct: 128 KTPDASVRTYTDHMRETALQREKEETMRLIAKKKKEEEEAAAKHQKDSAPPPPASSSSSS 187
Query: 119 PKKRGRWD-QTSDGDVTPXXXXXXXXXXXXXXDVNIEAQIRDIQNRKKDVSEGGGEEKQK 177
K+R RWD DG I R D + G +
Sbjct: 188 SKRRHRWDLPEEDGAAAKKAKAASSDWDLPDAAPGIGRWDAPTPGRVSDATPSAGRRNRW 247
Query: 178 RVGLGESGYFDSDIYDGGGKFEGYVKS 204
DSD GGG G S
Sbjct: 248 DETPTPGRVTDSDATPGGGVTPGATPS 274
Score = 81 (33.6 bits), Expect = 1.8e-229, Sum P(3) = 1.8e-229
Identities = 26/107 (24%), Positives = 53/107 (49%)
Query: 501 QERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAA-- 558
Q RH +K++ +I + V P++ ++ +IE L DE+ R ++ LA+AA
Sbjct: 623 QARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLSDENQKVRTITALSLAALAEAAAP 682
Query: 559 -GLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFLKA 604
G+ + S ++P + + +R+ + A A+G ++P + A
Sbjct: 683 YGIESFDSVLKP----LWKGIRSHRGKVLAAFLKAIGF--IIPLMDA 723
Score = 72 (30.4 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 30/133 (22%), Positives = 58/133 (43%)
Query: 489 ILPLLMS----PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYAR 544
+LP LM+ P L Q ++K + + + ++ + Y++ + ++E L+D D R
Sbjct: 1093 VLPALMNEYRVPELNVQNG--VLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR 1150
Query: 545 VEGREIISNLAKA-AGLAT------MISTMRPDIDNIDEYVRNTTARAFAVVASALGIPS 597
+ ++A AGL +++ + P+I +V N A + ALG
Sbjct: 1151 QTAASAVKHMALGVAGLGCEDALVHLLNFIWPNIFETSPHVINAVMEAIEGMRVALGAAV 1210
Query: 598 LLPFLKAGGVTPA 610
+L + G PA
Sbjct: 1211 ILNYCLQGLFHPA 1223
Score = 57 (25.1 bits), Expect = 2.9e-35, Sum P(4) = 2.9e-35
Identities = 28/152 (18%), Positives = 63/152 (41%)
Query: 1139 IAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPEL-N 1197
++KA G ++A + ++ + R T A ++VA +LP L +
Sbjct: 564 LSKAAGLASMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLPFLKAVCQSKRSWQ 623
Query: 1198 VQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVYGF 1257
++ +K + + IG ++ ++ ++E L D + R ++ +A +
Sbjct: 624 ARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLSDENQKVRTITALSLAALAEAAAPY 683
Query: 1258 GCEDALTHLLNYVWPNIFETSPHLVQAFMDAV 1289
G E + +L +W I ++ AF+ A+
Sbjct: 684 GIE-SFDSVLKPLWKGIRSHRGKVLAAFLKAI 714
Score = 54 (24.1 bits), Expect = 1.8e-34, Sum P(3) = 1.8e-34
Identities = 16/60 (26%), Positives = 29/60 (48%)
Query: 1183 VLPALMNEYRVPELNVQNG--VLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR 1240
+LP LM P L Q ++K + + + EM + Y++ + ++E L+D D R
Sbjct: 499 ILPLLMQ----PTLEDQERHLLVKVIDRILYKLDEMVRPYVHKILVVIEPLLIDEDYYAR 554
Score = 54 (24.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 29/159 (18%), Positives = 69/159 (43%)
Query: 458 IKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTL---EDQ---ERHLLVKVID 511
+K+ + R+ + I GA + ++ LL+ L ++Q + ++++
Sbjct: 821 LKDESEQYRRMVMETIDKVVTNLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFG 880
Query: 512 RILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLA---KAAGLATMISTMR 568
++ L V+PY+ +I I+ L ++ R + ++IS +A K G ++ +
Sbjct: 881 AVVNALGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCGEEQLMGHLG 940
Query: 569 PDIDNI--DEY--VRNTTARAFAVVASALGIPSLLPFLK 603
+ +EY V + A + + +G+ + P +K
Sbjct: 941 VVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIK 979
Score = 53 (23.7 bits), Expect = 0., Sum P(3) = 0.
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 105 TLKAVPTNGEAKAAPKK-RGRWDQT--SDGDVTP 135
T V +G A PK+ R RWD+T + G TP
Sbjct: 272 TPSGVTWDGLATPTPKRQRSRWDETPATMGSATP 305
Score = 52 (23.4 bits), Expect = 4.4e-39, Sum P(4) = 4.4e-39
Identities = 22/110 (20%), Positives = 52/110 (47%)
Query: 905 INRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAFQEQTTEDVV 964
I +++ +K+ RK + + LGA + +++ L+ L ++Q E +
Sbjct: 461 IMKLLLKVKNGTPPQRKTALRQLTDKARELGAGPLFNKILPLLMQPTL---EDQ--ERHL 515
Query: 965 MLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIA 1014
++ I+ +L + V+PY+ +I I L ++ R + ++IS ++
Sbjct: 516 LVKVIDRILYKLDEMVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLS 565
Score = 48 (22.0 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 29/124 (23%), Positives = 53/124 (42%)
Query: 484 PLFNQILPLLMSPTLEDQERHLLVKVID---RILYKLDDLV--RPYVHKILVVIEPLLID 538
P +LP L +P L+++ + ID RI + + V R ++ ++E L
Sbjct: 976 PPIKDLLPRL-TPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAH 1034
Query: 539 EDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSL 598
+ R +AKA G +++T+ ++ + R T A A+VA ++
Sbjct: 1035 KKGIRRATVNTF-GYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTV 1093
Query: 599 LPFL 602
LP L
Sbjct: 1094 LPAL 1097
Score = 41 (19.5 bits), Expect = 1.7e-123, Sum P(3) = 1.7e-123
Identities = 22/88 (25%), Positives = 38/88 (43%)
Query: 1128 IRRATVNTFGYIAKAIGPHDVLATLLNNLKV--QERQNRVCTTVAIAIVAETCSPF--TV 1183
+R T F +A A+G + LL LK Q +++ I IV + V
Sbjct: 588 VRNTTARAFSVVASALG----IPALLPFLKAVCQSKRSWQARHTGIKIVQQIAILIGCAV 643
Query: 1184 LPALMNEYRVPE--LNVQNGVLKALSFL 1209
LP L + + E L+ +N ++ ++ L
Sbjct: 644 LPHLRSLVEIIEHGLSDENQKVRTITAL 671
>WB|WBGene00011605 [details] [associations]
symbol:T08A11.2 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] InterPro:IPR016024 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0002119 GO:GO:0040011
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020 EMBL:Z50874
KO:K12828 OMA:GVEAQYI InterPro:IPR015016 Pfam:PF08920
GeneTree:ENSGT00390000018393 EMBL:Z50875 PIR:T24140
RefSeq:NP_497853.1 ProteinModelPortal:G5EEQ8 SMR:G5EEQ8
EnsemblMetazoa:T08A11.2 GeneID:175549 KEGG:cel:CELE_T08A11.2
CTD:175549 WormBase:T08A11.2 NextBio:888628 Uniprot:G5EEQ8
Length = 1322
Score = 1909 (677.1 bits), Expect = 0., Sum P(3) = 0.
Identities = 361/464 (77%), Positives = 408/464 (87%)
Query: 896 ARLVGASEIINRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAF 955
A+ VG E+I R+VDDLKDENEQYRKMVME+IE ++ GA DID+RLEEQLIDG+LYAF
Sbjct: 859 AQKVGCVEMIARIVDDLKDENEQYRKMVMETIENIVALQGATDIDARLEEQLIDGLLYAF 918
Query: 956 QEQTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAV 1015
QEQT ED VML+GFGTI + LG+R K Y+PQICGTILWRLNNKSAKVRQQAADLI+RIA
Sbjct: 919 QEQTQEDSVMLDGFGTICSSLGRRAKAYIPQICGTILWRLNNKSAKVRQQAADLIARIAP 978
Query: 1016 VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL 1075
VM C+EEK+MGH+GVVLYEYLGEEYPEVLGSILGALKAI NVIGMTKMTPPIKDLLPRL
Sbjct: 979 VMHMCEEEKMMGHMGVVLYEYLGEEYPEVLGSILGALKAICNVIGMTKMTPPIKDLLPRL 1038
Query: 1076 TPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFXXXXXXKAHKKAIRRATVNT 1135
TPILKNRHEKVQENCIDLVG IADRG E+VSAREWMRICF KAHKK+IRRA +NT
Sbjct: 1039 TPILKNRHEKVQENCIDLVGAIADRGSEFVSAREWMRICFELLELLKAHKKSIRRAAINT 1098
Query: 1136 FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE 1195
FG+IAKAIGPHDVLATLLNNLKVQERQ RVCTTVAIAIV+ETC+PFTVLPA+MNEYRVPE
Sbjct: 1099 FGFIAKAIGPHDVLATLLNNLKVQERQLRVCTTVAIAIVSETCAPFTVLPAIMNEYRVPE 1158
Query: 1196 LNVQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVY 1255
+NVQNGVLKALSF+FEYIGEM KDYIYAV PLL DALM+RD VHRQ A + H+A+GVY
Sbjct: 1159 INVQNGVLKALSFMFEYIGEMAKDYIYAVVPLLIDALMERDQVHRQIAVDAVAHLAIGVY 1218
Query: 1256 GFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHPARK 1315
GFGCEDAL HLLNYVWPN+ E SPHL+Q ++ A EG+RV+LGP+++LQY LQ L+HPARK
Sbjct: 1219 GFGCEDALIHLLNYVWPNMLENSPHLIQRWVFACEGMRVSLGPIKVLQYCLQALWHPARK 1278
Query: 1316 VRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYELDYVL 1359
VR+ WK++N+L +G DALI+AYPRI+N N Y+RYELDY L
Sbjct: 1279 VREPVWKVFNNLILGSADALIAAYPRIENTPTNQYVRYELDYNL 1322
Score = 1072 (382.4 bits), Expect = 0., Sum P(3) = 0.
Identities = 214/294 (72%), Positives = 242/294 (82%)
Query: 321 LQPPAGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAGYIPIRTP 380
++ PA H+ MTPEQ+Q YRWE+EID+RNRPLTD+EL+++FPPGYKVL PP YIP+RTP
Sbjct: 375 MKTPAPHMIPMTPEQMQIYRWEKEIDDRNRPLTDEELDSLFPPGYKVLVPPMNYIPLRTP 434
Query: 381 ARKLXXXXX-XXXXXXXXFFIQQ--------EDKTAKYMDNQPKG-NLPFLKPEDAQYFD 430
+RKL FF+ E +D QPK LP LKP+D QYFD
Sbjct: 435 SRKLMATPTPMGGAAGGGFFMPGTPDRDGIGEKGVGGLVDTQPKNAELPPLKPDDMQYFD 494
Query: 431 KLLVDVDEDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQIL 490
KLL+DVDE L+ EE ER+IM+ LLKIKNGTPPMRK+ LR+IT+ AR++GAGPLFNQIL
Sbjct: 495 KLLMDVDESQLTKEEKNEREIMEHLLKIKNGTPPMRKSGLRKITENARKYGAGPLFNQIL 554
Query: 491 PLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREI 550
PLLMSP+LEDQERHL+VKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREI
Sbjct: 555 PLLMSPSLEDQERHLMVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREI 614
Query: 551 ISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFLKA 604
ISNLAKAAGLATMISTMRPDIDN+DEYVRNTTARAFAVVASALGIP+LLPFLKA
Sbjct: 615 ISNLAKAAGLATMISTMRPDIDNVDEYVRNTTARAFAVVASALGIPALLPFLKA 668
Score = 432 (157.1 bits), Expect = 1.3e-258, Sum P(3) = 1.3e-258
Identities = 110/236 (46%), Positives = 130/236 (55%)
Query: 602 LKAGGVTPA-ATRWDETPGHPKPGAETPGATPSTRLWDXXXXXXXXXXXXXXRETPSHDK 660
L A TP+ + + G K A+ ATP WD TPS DK
Sbjct: 209 LGAASATPSQGSAPRKRLGFSKISADA--ATPRAARWDETPAHSTGAADA----TPSVDK 262
Query: 661 -----AQSSIRRNRWDETPKTERETPGHSSGWA-ETPKTDRAGPGGDLIQETPTPGGVSS 714
A + RRNRWDETPK + GW ETP R G I++TP+ +S
Sbjct: 263 WSTTPAAQTPRRNRWDETPKENLNDGSMTPGWGMETPA--RGGSDDVKIEDTPS----AS 316
Query: 715 KRRSRWDETPQATPSGAMTPSAATP---GGMTPSTPITP-HVGSTPL--MTPSGVTPTGN 768
KRRSRWD TP TP+ A AATP G TPS TP H TP+ MTP G TP G
Sbjct: 317 KRRSRWDLTPSQTPNVA----AATPLHSGLQTPS--FTPSHPSQTPIGAMTPGGATPIGT 370
Query: 769 KAMAMATPTPGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPP 824
AM M TP P H+ MTPEQ+Q YRWE+EID+RNRPLTD+EL+++FPPGYKVL PP
Sbjct: 371 AAMGMKTPAP-HMIPMTPEQMQIYRWEKEIDDRNRPLTDEELDSLFPPGYKVLVPP 425
Score = 212 (79.7 bits), Expect = 2.7e-241, Sum P(4) = 2.7e-241
Identities = 35/56 (62%), Positives = 46/56 (82%)
Query: 280 HLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAGHLAAMTPEQ 335
H+ MTPEQ+Q YRWE+EID+RNRPLTD+EL+++FPPGYKVL PP ++ TP +
Sbjct: 381 HMIPMTPEQMQIYRWEKEIDDRNRPLTDEELDSLFPPGYKVLVPPMNYIPLRTPSR 436
Score = 189 (71.6 bits), Expect = 0., Sum P(3) = 0.
Identities = 46/135 (34%), Positives = 74/135 (54%)
Query: 154 EAQIRDIQNRKKDVSEGGGEEKQK--RVGLGESGYFDSDIYDG--GGKFEGYVKSIA--- 206
E + + N++ +E E K +V G +G FD+D+Y G + Y+ SI
Sbjct: 11 ELNRKRVANQRAAAAEDNDENKGNGNKVAFGAAGNFDTDVYGSVRGENRDSYLDSIGTGE 70
Query: 207 DDDFDYQASFN-QNKRSGYTAPAALLNDIAQSEKDYDPFADRRQKTVAEKEDEY--RAIR 263
+DD D + + Q K + Y P + ++A + +D DPFAD R KT+AE++ +Y RA+R
Sbjct: 71 EDDVDEDSMPSVQKKSTNYAQPHKFIEEVAAASEDTDPFADTRTKTIAERQSKYHERAMR 130
Query: 264 RRMIISPERVDPFAE 278
R+ ISP+R D F +
Sbjct: 131 RQ--ISPDRADAFVD 143
Score = 113 (44.8 bits), Expect = 0., Sum P(3) = 0.
Identities = 26/59 (44%), Positives = 37/59 (62%)
Query: 68 KTPDVGSRTYAEVMREQLVRGEEKEVRKKLQDKAKDGTLKAVPTNGEAKAAPKKRGRWD 126
+TPD +R YAEVMR+Q+ E+ V ++L D+AK G L G+ + KK+GRWD
Sbjct: 144 QTPDNRNRGYAEVMRDQMYHEEKGRVERELADRAKAGELHVT---GQPE---KKKGRWD 196
Score = 104 (41.7 bits), Expect = 2.5e-211, Sum P(3) = 2.5e-211
Identities = 35/106 (33%), Positives = 47/106 (44%)
Query: 1 YIPIRTPARKLXXXXX-XXXXXXXXFFIQQ--------EDKTAKYMDNQPKG-NLPFLKP 50
YIP+RTP+RKL FF+ E +D QPK LP LKP
Sbjct: 428 YIPLRTPSRKLMATPTPMGGAAGGGFFMPGTPDRDGIGEKGVGGLVDTQPKNAELPPLKP 487
Query: 51 EDAQYFDKLLSNGKHCGKTPDVGSRTYAEVMREQL-VRGEEKEVRK 95
+D QYFDKLL + T + + E+M L ++ +RK
Sbjct: 488 DDMQYFDKLLMDVDESQLTKE--EKNEREIMEHLLKIKNGTPPMRK 531
Score = 71 (30.1 bits), Expect = 1.7e-220, Sum P(3) = 1.7e-220
Identities = 28/92 (30%), Positives = 33/92 (35%)
Query: 681 PGHSSG-W-AETPKTDRAGPGGDLIQETPTPGGVSSKRRSRWD-ETPQATPSGAMTPSAA 737
P G W AE P TD + TP+ G KR ATP A
Sbjct: 188 PEKKKGRWDAEAPSTDASSDNLGAASATPSQGSAPRKRLGFSKISADAATPRAARWDE-- 245
Query: 738 TPGGMTPSTPITPHVGSTPLMTPSGVTPTGNK 769
TP T + TP V TP+ TP N+
Sbjct: 246 TPAHSTGAADATPSVDKWST-TPAAQTPRRNR 276
Score = 69 (29.3 bits), Expect = 2.7e-241, Sum P(4) = 2.7e-241
Identities = 41/183 (22%), Positives = 75/183 (40%)
Query: 436 VDEDSLSPEEAKE-----RKIMKLLLKIKNGTPPMRKAA--LRQITDKAREFGAGPL-FN 487
+DED + E +E K L I P + +R T +A A L
Sbjct: 601 IDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNVDEYVRNTTARAFAVVASALGIP 660
Query: 488 QILPLLMSPTLED---QERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYAR 544
+LP L + Q RH +K++ ++ + V P++ ++ ++E L DE R
Sbjct: 661 ALLPFLKAVCKSKKSWQARHTGIKIVQQMAILMGCAVLPHLKALVDIVESGLDDEQQKVR 720
Query: 545 VEGREIISNLAKAA---GLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPF 601
++ LA+A+ G+ S ++P + + +R + A A+G L+P
Sbjct: 721 TITALCLAALAEASSPYGIEAFDSVLKP----LWKGIRMHRGKGLAAFLKAIGY--LIPL 774
Query: 602 LKA 604
+ A
Sbjct: 775 MDA 777
Score = 65 (27.9 bits), Expect = 2.4e-134, Sum P(4) = 2.4e-134
Identities = 36/179 (20%), Positives = 79/179 (44%)
Query: 1130 RATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNR--VCTTVA--IAIVAETCSPFTVLP 1185
R V+T IA+ +G +++A ++++LK + Q R V T+ +A+ T +
Sbjct: 849 RQLVDTTVEIAQKVGCVEMIARIVDDLKDENEQYRKMVMETIENIVALQGATDIDARLEE 908
Query: 1186 ALMNE--YRVPELNVQNGV-LKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQT 1242
L++ Y E ++ V L + +G K YI + + L ++ RQ
Sbjct: 909 QLIDGLLYAFQEQTQEDSVMLDGFGTICSSLGRRAKAYIPQICGTILWRLNNKSAKVRQQ 968
Query: 1243 ACATIKHMALGVYGFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRI 1301
A I +A ++ E + H+ ++ + E P ++ + + A++ + +G ++
Sbjct: 969 AADLIARIAPVMHMCEEEKMMGHMGVVLYEYLGEEYPEVLGSILGALKAICNVIGMTKM 1027
Score = 57 (25.1 bits), Expect = 1.3e-51, Sum P(4) = 1.3e-51
Identities = 34/167 (20%), Positives = 66/167 (39%)
Query: 1139 IAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPEL-N 1197
+AKA G +++T+ ++ + R T A A+VA +LP L + +
Sbjct: 618 LAKAAGLATMISTMRPDIDNVDEYVRNTTARAFAVVASALGIPALLPFLKAVCKSKKSWQ 677
Query: 1198 VQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVYGF 1257
++ +K + + +G ++ A+ ++E L D R + +A +
Sbjct: 678 ARHTGIKIVQQMAILMGCAVLPHLKALVDIVESGLDDEQQKVRTITALCLAALAEASSPY 737
Query: 1258 GCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQY 1304
G E A +L +W I + AF+ A+ G + L Y
Sbjct: 738 GIE-AFDSVLKPLWKGIRMHRGKGLAAFLKAI-GYLIPLMDAEYASY 782
Score = 53 (23.7 bits), Expect = 1.3e-239, Sum P(4) = 1.3e-239
Identities = 35/152 (23%), Positives = 72/152 (47%)
Query: 418 LPFLKPEDAQYFDK--LLVDVDEDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQITD 475
+P + E A Y+ + +L+ + E + SP+E ++ ++K++ K T + + +R D
Sbjct: 772 IPLMDAEYASYYTREVMLILIREFA-SPDEEMKKIVLKVV-KQCCATDGVEASYIR---D 826
Query: 476 KAREFGAGPLFNQILPL-------LMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKI 528
+ +NQ + + L+ T+E ++ V++I RI+ L D Y +
Sbjct: 827 EVLPSFFKAFWNQRMAMDRRNYRQLVDTTVEIAQKVGCVEMIARIVDDLKDENEQYRKMV 886
Query: 529 LVVIEPLLIDE---DYYARVEGREIISNLAKA 557
+ IE ++ + D AR+E ++I L A
Sbjct: 887 METIENIVALQGATDIDARLE-EQLIDGLLYA 917
Score = 53 (23.7 bits), Expect = 1.1e-50, Sum P(3) = 1.1e-50
Identities = 16/71 (22%), Positives = 34/71 (47%)
Query: 1183 VLPALMNEYRVPELNVQNG--VLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR 1240
+LP LM+ P L Q ++K + + + ++ + Y++ + ++E L+D D R
Sbjct: 553 ILPLLMS----PSLEDQERHLMVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYAR 608
Query: 1241 QTACATIKHMA 1251
I ++A
Sbjct: 609 VEGREIISNLA 619
Score = 52 (23.4 bits), Expect = 1.2e-51, Sum P(5) = 1.2e-51
Identities = 25/112 (22%), Positives = 52/112 (46%)
Query: 903 EIINRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAFQEQTTED 962
EI+ ++ +K+ RK + I + GA + +++ L+ L ++Q E
Sbjct: 514 EIMEHLLK-IKNGTPPMRKSGLRKITENARKYGAGPLFNQILPLLMSPSL---EDQ--ER 567
Query: 963 VVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIA 1014
+M+ I+ +L V+PY+ +I I L ++ R + ++IS +A
Sbjct: 568 HLMVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLA 619
Score = 48 (22.0 bits), Expect = 4.4e-239, Sum P(4) = 4.4e-239
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 431 KLLVDVDEDSLSPEEAKERKIMKLLL 456
K LVD+ E L E+ K R I L L
Sbjct: 702 KALVDIVESGLDDEQQKVRTITALCL 727
Score = 47 (21.6 bits), Expect = 3.0e-311, Sum P(3) = 3.0e-311
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 101 AKDGTLKAVPTNGEAKAAPKKRGRWDQT-----SDGDVTP 135
A D T + A +R RWD+T +DG +TP
Sbjct: 253 AADATPSVDKWSTTPAAQTPRRNRWDETPKENLNDGSMTP 292
Score = 45 (20.9 bits), Expect = 2.0e-243, Sum P(3) = 2.0e-243
Identities = 15/63 (23%), Positives = 26/63 (41%)
Query: 435 DVDEDSL------SPEEAKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQ 488
DVDEDS+ S A+ K ++ + T P + I ++ ++ + Q
Sbjct: 73 DVDEDSMPSVQKKSTNYAQPHKFIEEVAAASEDTDPFADTRTKTIAERQSKYHERAMRRQ 132
Query: 489 ILP 491
I P
Sbjct: 133 ISP 135
Score = 44 (20.5 bits), Expect = 5.2e-26, Sum P(4) = 5.2e-26
Identities = 11/69 (15%), Positives = 36/69 (52%)
Query: 489 ILPLLMSP--TLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVE 546
+LP +M+ E ++ ++K + + + ++ + Y++ ++ ++ L++ D R
Sbjct: 1146 VLPAIMNEYRVPEINVQNGVLKALSFMFEYIGEMAKDYIYAVVPLLIDALMERDQVHRQI 1205
Query: 547 GREIISNLA 555
+ +++LA
Sbjct: 1206 AVDAVAHLA 1214
Score = 43 (20.2 bits), Expect = 2.0e-26, Sum P(4) = 2.0e-26
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 554 LAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLP 600
+AKA G +++T+ ++ + +R T A A+V+ ++LP
Sbjct: 1102 IAKAIGPHDVLATLLNNLKVQERQLRVCTTVAIAIVSETCAPFTVLP 1148
Score = 42 (19.8 bits), Expect = 1.0e-310, Sum P(3) = 1.0e-310
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 114 EAKAAPKKRGRWDQT 128
+ +A K+R RWD T
Sbjct: 311 DTPSASKRRSRWDLT 325
Score = 42 (19.8 bits), Expect = 1.0e-310, Sum P(3) = 1.0e-310
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 115 AKAAPKKRGRWDQT---SDG--DVTP 135
A AA + RWD+T S G D TP
Sbjct: 233 ADAATPRAARWDETPAHSTGAADATP 258
Score = 37 (18.1 bits), Expect = 2.4e-134, Sum P(4) = 2.4e-134
Identities = 6/17 (35%), Positives = 9/17 (52%)
Query: 1128 IRRATVNTFGYIAKAIG 1144
+R T F +A A+G
Sbjct: 642 VRNTTARAFAVVASALG 658
>DICTYBASE|DDB_G0275957 [details] [associations]
symbol:sf3b1 "splicing factor 3B subunit 1"
species:44689 "Dictyostelium discoideum" [GO:0005686 "U2 snRNP"
evidence=ISS] [GO:0003729 "mRNA binding" evidence=ISS] [GO:0000245
"spliceosomal complex assembly" evidence=ISS] InterPro:IPR016024
dictyBase:DDB_G0275957 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 InterPro:IPR021133 PROSITE:PS50077 GO:GO:0003729
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0000245
GO:GO:0005686 eggNOG:COG5181 KO:K12828 OMA:GVEAQYI
InterPro:IPR015016 Pfam:PF08920 RefSeq:XP_643385.1
ProteinModelPortal:Q86JC5 SMR:Q86JC5 STRING:Q86JC5
EnsemblProtists:DDB0233168 GeneID:8620270 KEGG:ddi:DDB_G0275957
InParanoid:Q86JC5 Uniprot:Q86JC5
Length = 1051
Score = 1900 (673.9 bits), Expect = 7.6e-289, Sum P(3) = 7.6e-289
Identities = 367/483 (75%), Positives = 414/483 (85%)
Query: 878 KRDYTLENGIQKTIKGKPARLVGASEIINRVVDDLKDENEQYRKMVMESIEKTMSNLGAA 937
KR+Y L ++ T++ A VG EII R+VDDLKDE+E YR+MVME+IEK +S LGA+
Sbjct: 573 KRNYKLL--VETTLE--IANKVGGGEIIERIVDDLKDESEAYRRMVMEAIEKIVSTLGAS 628
Query: 938 DIDSRLEEQLIDGILYAFQEQTTEDV-VMLNGFGTIVNQLGKRVKPYLPQICGTILWRLN 996
DI LEE+LIDGILYAFQEQTT++ +ML GFGT+V L R++PYL QI GTI WRLN
Sbjct: 629 DISPTLEERLIDGILYAFQEQTTDETSIMLQGFGTVVLALNTRIQPYLQQIAGTIKWRLN 688
Query: 997 NKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIV 1056
NKSAKVRQQAADLISRIAVVM C EE+L+ HLG +LYEYLGEEYPEVLGSILGALKAIV
Sbjct: 689 NKSAKVRQQAADLISRIAVVMMNCGEEQLLSHLGQILYEYLGEEYPEVLGSILGALKAIV 748
Query: 1057 NVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFX 1116
NVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRG ++VS RE MRICF
Sbjct: 749 NVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGSDFVSDREGMRICFE 808
Query: 1117 XXXXXKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAE 1176
KAHKK IRRA VNTFGYIAKAIGP +VLATLLNNLKVQ+RQNRVCTTVAIAIVAE
Sbjct: 809 LLDMLKAHKKGIRRAAVNTFGYIAKAIGPQEVLATLLNNLKVQDRQNRVCTTVAIAIVAE 868
Query: 1177 TCSPFTVLPALMNEYRVPELNVQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRD 1236
TC+P+TVLP L+NEYR+PELNVQNGVLK+LSFLFEYIGEMGKDYIYAVT LLEDALMDRD
Sbjct: 869 TCAPYTVLPGLINEYRIPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTTLLEDALMDRD 928
Query: 1237 LVHRQTACATIKHMALGVYGFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVAL 1296
VHRQTAC+ IKH++LGV G GCED+LTHLLNYVWPN+FETSPH++ AF++AVEGLR AL
Sbjct: 929 AVHRQTACSAIKHISLGVMGLGCEDSLTHLLNYVWPNVFETSPHVINAFLEAVEGLRFAL 988
Query: 1297 GPVRILQYVLQGLFHPARKVRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYELD 1356
GP ILQY LQGLFHP+RKVR++YWK+YN LYI QDAL YPR ++ N Y RYELD
Sbjct: 989 GPNTILQYTLQGLFHPSRKVRNIYWKLYNMLYISSQDALTPCYPRTLDENDNKYQRYELD 1048
Query: 1357 YVL 1359
+V+
Sbjct: 1049 FVI 1051
Score = 859 (307.4 bits), Expect = 7.6e-289, Sum P(3) = 7.6e-289
Identities = 181/283 (63%), Positives = 213/283 (75%)
Query: 327 HLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPP-GYKVLQPPAGYIPIRTPARKLX 385
++ TP+ QA + ++EIDERNRP TD+EL+ + P GY++LQPPA Y P+ +
Sbjct: 117 NILMQTPDPYQA-QLQKEIDERNRPWTDEELDNILPSEGYEILQPPANYQPVIASKKLTA 175
Query: 386 XXXXXXXXXXXXFFIQQEDKTAKYMD--NQPKGNLPFLKPEDAQYFDKLLVDV-DEDS-L 441
FFIQ+E + + P G +KPED YF+K+L + D D L
Sbjct: 176 STPIGAAGTSGGFFIQEEQSRGQDFGIIDAPDGIT--IKPEDKVYFEKILQEGGDNDEHL 233
Query: 442 SPEEAKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQ 501
SPEE KER+IMKLLL+IKNGTPPMRK ALRQ+TDKAREFG PLFNQILPL S +LEDQ
Sbjct: 234 SPEEQKERRIMKLLLRIKNGTPPMRKQALRQLTDKAREFGPAPLFNQILPLFTSTSLEDQ 293
Query: 502 ERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLA 561
ERHLLVKVIDRILYKLDDLVRPYV KIL VIEP LID++YYARVE REIISNL+KAAGLA
Sbjct: 294 ERHLLVKVIDRILYKLDDLVRPYVRKILSVIEPFLIDQNYYARVEAREIISNLSKAAGLA 353
Query: 562 TMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFLKA 604
+M STMRPDID+ +E +RNTTARAFAVVASALGIPSL+PFLKA
Sbjct: 354 SMTSTMRPDIDSPEEDIRNTTARAFAVVASALGIPSLMPFLKA 396
Score = 213 (80.0 bits), Expect = 2.3e-216, Sum P(2) = 2.3e-216
Identities = 64/172 (37%), Positives = 89/172 (51%)
Query: 668 NRWDETP----KTERETPGHSSGWAETPKTDRAGPGGDLIQETPTPGGVSSKRRSRWDET 723
+ WD+T K TP + W ETP + G ++ETP KRRSRWDET
Sbjct: 10 SEWDDTTLNKAKVVEATPRRNR-WDETP-VSKPSTG---VEETP-------KRRSRWDET 57
Query: 724 PQATPSGAMTPSAATPGGMTPSTPITPHVGSTPL---MTPSGVTPTGNKAMAMATPTPG- 779
P SG ++ GG+TP+ + G TP+ M GVTP N + + G
Sbjct: 58 PININSGGLS------GGVTPNYNAMSNGGVTPIFNNMMDGGVTPVYNSNNNNNSNSNGG 111
Query: 780 -----HLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPP-GYKVLQPPA 825
++ TP+ QA + ++EIDERNRP TD+EL+ + P GY++LQPPA
Sbjct: 112 SNNNKNILMQTPDPYQA-QLQKEIDERNRPWTDEELDNILPSEGYEILQPPA 162
Score = 127 (49.8 bits), Expect = 6.0e-219, Sum P(4) = 6.0e-219
Identities = 25/60 (41%), Positives = 41/60 (68%)
Query: 280 HLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPP-GYKVLQPPAGHLAAMTPEQIQA 338
++ TP+ QA + ++EIDERNRP TD+EL+ + P GY++LQPPA + + +++ A
Sbjct: 117 NILMQTPDPYQA-QLQKEIDERNRPWTDEELDNILPSEGYEILQPPANYQPVIASKKLTA 175
Score = 97 (39.2 bits), Expect = 7.2e-97, Sum P(3) = 7.2e-97
Identities = 64/338 (18%), Positives = 135/338 (39%)
Query: 976 LGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYE 1035
+G + P+L + + L ++ KVR A IS +A E L + Y
Sbjct: 421 MGCAILPHLKNLVVIVEHGLTDEQPKVRTITALAISALAEAATPYGIESFDSVLKPLWYG 480
Query: 1036 YLGEEYPEV-LGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLV 1094
+Y E L + L A+ I+ ++ + + K+++ L K +++++ + +V
Sbjct: 481 I--RQYREKGLAAFLKAIGYIIPLMESSYASYYTKEVMTILVREFKTNEDEMKKIVLKVV 538
Query: 1095 GR-IADRGPEYVSAREWMRICFXXXXXXK--AHKKAIRRATVNTFGYIAKAIGPHDVLAT 1151
+ +A G E RE + F + A K + V T IA +G +++
Sbjct: 539 KQCVATEGVESSYVREEIIPEFFKQFWVRRMALDKRNYKLLVETTLEIANKVGGGEIIER 598
Query: 1152 LLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNE------YRVPELNVQNG--VL 1203
++++LK + R AI + T + P L Y E +L
Sbjct: 599 IVDDLKDESEAYRRMVMEAIEKIVSTLGASDISPTLEERLIDGILYAFQEQTTDETSIML 658
Query: 1204 KALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVYGFGCEDAL 1263
+ + + + Y+ + ++ L ++ RQ A I +A+ + G E L
Sbjct: 659 QGFGTVVLALNTRIQPYLQQIAGTIKWRLNNKSAKVRQQAADLISRIAVVMMNCGEEQLL 718
Query: 1264 THLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRI 1301
+HL ++ + E P ++ + + A++ + +G ++
Sbjct: 719 SHLGQILYEYLGEEYPEVLGSILGALKAIVNVIGMTKM 756
Score = 86 (35.3 bits), Expect = 2.6e-205, Sum P(3) = 2.6e-205
Identities = 44/147 (29%), Positives = 62/147 (42%)
Query: 662 QSSIRRNRWDETPKTE-----RETPGHSSGWAETPKTDRAGPGGDLIQETPTPGGVSSKR 716
+++ RRNRWDETP ++ ETP S W ETP +G G GGV+
Sbjct: 24 EATPRRNRWDETPVSKPSTGVEETPKRRSRWDETPININSG--G-------LSGGVTPNY 74
Query: 717 RSRWDETPQATPSGAMTP--SAATPGGMTPSTPITPHVGSTPLMTPSGVTPTGNKAMAMA 774
A +G +TP + GG+TP + S S NK + M
Sbjct: 75 N--------AMSNGGVTPIFNNMMDGGVTPVYNSNNNNNSN-----SNGGSNNNKNILMQ 121
Query: 775 TPTPGHLAAMTPEQIQAYR-W-EREID 799
TP P + A + E + R W + E+D
Sbjct: 122 TPDP-YQAQLQKEIDERNRPWTDEELD 147
Score = 83 (34.3 bits), Expect = 6.0e-219, Sum P(4) = 6.0e-219
Identities = 27/107 (25%), Positives = 52/107 (48%)
Query: 501 QERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAA-- 558
Q RH +K++ +I + + P++ ++V++E L DE R IS LA+AA
Sbjct: 405 QARHTGIKIVQQIAILMGCAILPHLKNLVVIVEHGLTDEQPKVRTITALAISALAEAATP 464
Query: 559 -GLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFLKA 604
G+ + S ++P I +Y + A A+G ++P +++
Sbjct: 465 YGIESFDSVLKPLWYGIRQY----REKGLAAFLKAIGY--IIPLMES 505
Score = 69 (29.3 bits), Expect = 3.7e-208, Sum P(3) = 3.7e-208
Identities = 26/110 (23%), Positives = 43/110 (39%)
Query: 1 YIPIRTPARKLXXXXXXXXXXXXXFFIQQEDKTAKYMD--NQPKGNLPFLKPEDAQYFDK 58
Y P+ + FFIQ+E + + P G +KPED YF+K
Sbjct: 164 YQPVIASKKLTASTPIGAAGTSGGFFIQEEQSRGQDFGIIDAPDGIT--IKPEDKVYFEK 221
Query: 59 LLSNG----KHCGKTPDVGSRTYAEVMR-EQLVRGEEKEVRKKLQDKAKD 103
+L G +H R ++R + K+ ++L DKA++
Sbjct: 222 ILQEGGDNDEHLSPEEQKERRIMKLLLRIKNGTPPMRKQALRQLTDKARE 271
Score = 65 (27.9 bits), Expect = 1.1e-200, Sum P(2) = 1.1e-200
Identities = 31/103 (30%), Positives = 39/103 (37%)
Query: 612 TRWDETPGHPKPGAETPGATPSTRLWDXXXXXXXXXXXXXXRETPSHDKAQSSIRRNRWD 671
+ WD+T + A+ ATP WD ETP RR+RWD
Sbjct: 10 SEWDDTTLNK---AKVVEATPRRNRWDETPVSKPSTGV---EETPK--------RRSRWD 55
Query: 672 ETPKTERETPGHSSGWAETPKTDRAGPGGDL-IQETPTPGGVS 713
ETP + G S G TP + GG I GGV+
Sbjct: 56 ETP-ININSGGLSGG--VTPNYNAMSNGGVTPIFNNMMDGGVT 95
Score = 64 (27.6 bits), Expect = 1.3e-200, Sum P(2) = 1.3e-200
Identities = 16/33 (48%), Positives = 16/33 (48%)
Query: 608 TPAATRWDETP-GHPKPGAETPGATPSTRL-WD 638
TP RWDETP P G E TP R WD
Sbjct: 26 TPRRNRWDETPVSKPSTGVEE---TPKRRSRWD 55
Score = 58 (25.5 bits), Expect = 2.6e-216, Sum P(4) = 2.6e-216
Identities = 26/123 (21%), Positives = 56/123 (45%)
Query: 418 LPFLKPEDAQYFDKLLVDVDEDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQ--ITD 475
+P ++ A Y+ K ++ + E + +KI+ ++K T + + +R+ I +
Sbjct: 500 IPLMESSYASYYTKEVMTILVREFKTNEDEMKKIVLKVVKQCVATEGVESSYVREEIIPE 559
Query: 476 KAREFGAG--PLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIE 533
++F L + LL+ TLE + ++I+RI+ L D Y ++ IE
Sbjct: 560 FFKQFWVRRMALDKRNYKLLVETTLEIANKVGGGEIIERIVDDLKDESEAYRRMVMEAIE 619
Query: 534 PLL 536
++
Sbjct: 620 KIV 622
Score = 57 (25.1 bits), Expect = 7.6e-289, Sum P(3) = 7.6e-289
Identities = 19/87 (21%), Positives = 32/87 (36%)
Query: 103 DGTLKAVPTNGEAKAAPKKRGRWDQTS--------DGDVTPXXXXXXXXXXXXXXDVNIE 154
D T + P+ G + PK+R RWD+T G VTP + ++
Sbjct: 33 DETPVSKPSTG-VEETPKRRSRWDETPININSGGLSGGVTPNYNAMSNGGVTPIFNNMMD 91
Query: 155 AQIRDI--QNRKKDVSEGGGEEKQKRV 179
+ + N + + GG K +
Sbjct: 92 GGVTPVYNSNNNNNSNSNGGSNNNKNI 118
Score = 54 (24.1 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 29/152 (19%), Positives = 62/152 (40%)
Query: 1139 IAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPEL-N 1197
++KA G + +T+ ++ E R T A A+VA +++P L + +
Sbjct: 346 LSKAAGLASMTSTMRPDIDSPEEDIRNTTARAFAVVASALGIPSLMPFLKAVCKSKKSWQ 405
Query: 1198 VQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVYGF 1257
++ +K + + +G ++ + ++E L D R I +A +
Sbjct: 406 ARHTGIKIVQQIAILMGCAILPHLKNLVVIVEHGLTDEQPKVRTITALAISALAEAATPY 465
Query: 1258 GCEDALTHLLNYVWPNIFETSPHLVQAFMDAV 1289
G E + +L +W I + + AF+ A+
Sbjct: 466 GIE-SFDSVLKPLWYGIRQYREKGLAAFLKAI 496
Score = 53 (23.7 bits), Expect = 6.8e-05, Sum P(3) = 6.8e-05
Identities = 34/186 (18%), Positives = 80/186 (43%)
Query: 431 KLLVDVDEDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQIL 490
KLLV+ + + E I +++ +K+ + R+ + I GA + +
Sbjct: 577 KLLVETTLEIANKVGGGEI-IERIVDDLKDESEAYRRMVMEAIEKIVSTLGASDISPTLE 635
Query: 491 PLLMSPTL---EDQ---ERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYAR 544
L+ L ++Q E ++++ ++ L+ ++PY+ +I I+ L ++ R
Sbjct: 636 ERLIDGILYAFQEQTTDETSIMLQGFGTVVLALNTRIQPYLQQIAGTIKWRLNNKSAKVR 695
Query: 545 VEGREIISNLAKA---AGLATMISTMRPDIDNI--DEY--VRNTTARAFAVVASALGIPS 597
+ ++IS +A G ++S + + +EY V + A + + +G+
Sbjct: 696 QQAADLISRIAVVMMNCGEEQLLSHLGQILYEYLGEEYPEVLGSILGALKAIVNVIGMTK 755
Query: 598 LLPFLK 603
+ P +K
Sbjct: 756 MTPPIK 761
Score = 52 (23.4 bits), Expect = 8.5e-05, Sum P(3) = 8.5e-05
Identities = 20/112 (17%), Positives = 49/112 (43%)
Query: 506 LVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAA-GLAT-- 562
++K + + + ++ + Y++ + ++E L+D D R I +++ GL
Sbjct: 894 VLKSLSFLFEYIGEMGKDYIYAVTTLLEDALMDRDAVHRQTACSAIKHISLGVMGLGCED 953
Query: 563 ----MISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFLKAGGVTPA 610
+++ + P++ +V N A + ALG ++L + G P+
Sbjct: 954 SLTHLLNYVWPNVFETSPHVINAFLEAVEGLRFALGPNTILQYTLQGLFHPS 1005
Score = 51 (23.0 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 30/124 (24%), Positives = 52/124 (41%)
Query: 484 PLFNQILPLLMSPTLEDQERHLLVKVID---RILYKLDDLV--RPYVHKILVVIEPLLID 538
P +LP L +P L+++ + ID RI + D V R + +++ L
Sbjct: 758 PPIKDLLPRL-TPILKNRHEKVQENCIDLVGRIADRGSDFVSDREGMRICFELLDMLKAH 816
Query: 539 EDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSL 598
+ R +AKA G +++T+ ++ D R T A A+VA ++
Sbjct: 817 KKGIRRA-AVNTFGYIAKAIGPQEVLATLLNNLKVQDRQNRVCTTVAIAIVAETCAPYTV 875
Query: 599 LPFL 602
LP L
Sbjct: 876 LPGL 879
Score = 50 (22.7 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 18/71 (25%), Positives = 36/71 (50%)
Query: 947 LIDGILYAFQEQTTEDV---VMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVR 1003
L + IL F + ED +++ I+ +L V+PY+ +I I L +++ R
Sbjct: 277 LFNQILPLFTSTSLEDQERHLLVKVIDRILYKLDDLVRPYVRKILSVIEPFLIDQNYYAR 336
Query: 1004 QQAADLISRIA 1014
+A ++IS ++
Sbjct: 337 VEAREIISNLS 347
Score = 40 (19.1 bits), Expect = 7.0e-91, Sum P(3) = 7.0e-91
Identities = 15/62 (24%), Positives = 23/62 (37%)
Query: 1128 IRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPAL 1187
IR T F +A A+G ++ L K ++ T + I +LP L
Sbjct: 370 IRNTTARAFAVVASALGIPSLMPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHL 429
Query: 1188 MN 1189
N
Sbjct: 430 KN 431
Score = 39 (18.8 bits), Expect = 6.1e-287, Sum P(3) = 6.1e-287
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 116 KAAPKKRGRWDQT 128
+A P+ R RWD+T
Sbjct: 24 EATPR-RNRWDET 35
Score = 38 (18.4 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 8/50 (16%), Positives = 26/50 (52%)
Query: 1202 VLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMA 1251
++K + + + ++ + Y+ + ++E L+D++ R A I +++
Sbjct: 298 LVKVIDRILYKLDDLVRPYVRKILSVIEPFLIDQNYYARVEAREIISNLS 347
>ASPGD|ASPL0000047410 [details] [associations]
symbol:AN2420 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR016024 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:BN001307 EMBL:AACD01000039 eggNOG:COG5181
HOGENOM:HOG000166737 KO:K12828 InterPro:IPR015016 Pfam:PF08920
OMA:PKEWMRI OrthoDB:EOG4350F5 RefSeq:XP_660024.1
ProteinModelPortal:Q5BAL0 SMR:Q5BAL0 STRING:Q5BAL0
EnsemblFungi:CADANIAT00009127 GeneID:2874860 KEGG:ani:AN2420.2
Uniprot:Q5BAL0
Length = 1224
Score = 1742 (618.3 bits), Expect = 5.4e-288, Sum P(3) = 5.4e-288
Identities = 331/493 (67%), Positives = 398/493 (80%)
Query: 856 GVTLAFATSQIFLLTDLLFAYLKRDYTLENGIQKTIKGKPARL---VGASEIINRVVDDL 912
GVT ++ + L D ++ R L+ + + L VGA EI+ R++++L
Sbjct: 723 GVTASYLKEHV--LVDFFKSFWVRRMALDRRNYRQVVDTTVDLGQKVGAGEILERIINNL 780
Query: 913 KDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAFQEQTTEDVVMLNGFGTI 972
KDE+E YRKM +E++EKT+++LGAADI RLEE+LIDG+LYAFQEQ+ ED+++LNGFGT+
Sbjct: 781 KDESEPYRKMTVETVEKTIASLGAADISERLEERLIDGVLYAFQEQSIEDIIILNGFGTV 840
Query: 973 VNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVV 1032
VN LG R KPYLPQI TILWRLNNKSA VRQQAADLISRIA+VMK C E+ LMG LG+V
Sbjct: 841 VNALGTRCKPYLPQIVSTILWRLNNKSATVRQQAADLISRIALVMKQCGEDALMGKLGIV 900
Query: 1033 LYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCID 1092
LYEYLGEEYPEVLGSILGAL++IV V+G+ +M PPI+DLLPRLTPIL+NRHEKVQEN ID
Sbjct: 901 LYEYLGEEYPEVLGSILGALRSIVTVVGINQMQPPIRDLLPRLTPILRNRHEKVQENTID 960
Query: 1093 LVGRIADRGPEYVSAREWMRICFXXXXXXKAHKKAIRRATVNTFGYIAKAIGPHDVLATL 1152
LVGRIADRGPE V+AREWMRICF KAHKK IRRA NTFG+IAKAIGP DVLATL
Sbjct: 961 LVGRIADRGPESVNAREWMRICFELLDMLKAHKKGIRRAANNTFGFIAKAIGPQDVLATL 1020
Query: 1153 LNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKALSFLFEY 1212
LNNL+VQERQ+RVCT VAI IVAETC+PFTVLPALMNEYRVPELNVQNGVLKA++FLFEY
Sbjct: 1021 LNNLRVQERQSRVCTAVAIGIVAETCAPFTVLPALMNEYRVPELNVQNGVLKAMTFLFEY 1080
Query: 1213 IGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVYGFGCEDALTHLLNYVWP 1272
IGEM KDY+YAVTPLLEDAL+DRD VHRQTA +KH+ALGV G GCEDA+ HLLN V+P
Sbjct: 1081 IGEMAKDYVYAVTPLLEDALIDRDQVHRQTAATVVKHIALGVVGLGCEDAMVHLLNLVFP 1140
Query: 1273 NIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHPARKVRDVYWKIYNSLYIGGQ 1332
NIFETSPH++ ++A++ +R+A+G ++ YV GLFH ARKVR YW++YN Y+
Sbjct: 1141 NIFETSPHVIDRVIEAIDAIRMAVGTGTVMNYVWAGLFHSARKVRTPYWRLYNDAYVQSA 1200
Query: 1333 DALISAYPRIQND 1345
DA+I YP ++ D
Sbjct: 1201 DAIIPYYPELEED 1213
Score = 946 (338.1 bits), Expect = 5.4e-288, Sum P(3) = 5.4e-288
Identities = 200/296 (67%), Positives = 229/296 (77%)
Query: 324 PAGH--LAA-MTPEQIQA----YRWEREIDERNRPLTDDELEAMFPP-GYKVLQPPAGYI 375
P G+ LA M P Q+ A + +I RN PL+D+EL+ M P GYK+L+PP GY
Sbjct: 278 PVGNQGLATPMHPSQVGAPMIPTSFGTDISGRNAPLSDEELDMMLPSEGYKILEPPPGYA 337
Query: 376 PIRTPARKLXXXXX-XXXXXXXXFFIQQEDKTAKYMDNQ-PK-----GNLPFLKPEDAQY 428
PIRTPARKL F+ QE ++A+ + Q P G+L F KPED Y
Sbjct: 338 PIRTPARKLMATPAPIASSTGVGGFMMQEPESARSLGKQLPTEIPGVGDLQFFKPEDMAY 397
Query: 429 FDKLLVDVDEDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQ 488
F KL+ DE ++S EE KERKIM+LLLK+KNGTPPMRK ALRQ+TD AR+FGAGPLFNQ
Sbjct: 398 FGKLMDTGDESTMSVEELKERKIMRLLLKVKNGTPPMRKTALRQLTDNARQFGAGPLFNQ 457
Query: 489 ILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGR 548
ILPLLM +LEDQERHLLVKVIDR+LYKLDDLVRPYVHKILVVIEPLLID+DYYARVEGR
Sbjct: 458 ILPLLMEKSLEDQERHLLVKVIDRVLYKLDDLVRPYVHKILVVIEPLLIDQDYYARVEGR 517
Query: 549 EIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFLKA 604
EIISNLAKAAGLATMISTMRPDID++DEYVRNTTARAFAVVASALGIP+LLPFL+A
Sbjct: 518 EIISNLAKAAGLATMISTMRPDIDHVDEYVRNTTARAFAVVASALGIPALLPFLRA 573
Score = 135 (52.6 bits), Expect = 2.4e-202, Sum P(3) = 2.4e-202
Identities = 40/120 (33%), Positives = 55/120 (45%)
Query: 715 KRRSRWDETP-QATPSGAMTPSAATPGGMTPSTPITPHVGSTPL------MTPS--GVTP 765
KR+ RWD P TP+ + A TP P G P P+ TP
Sbjct: 220 KRKQRWDVAPTDETPAAPTSDDAKAKKSRWDQTP-APGGGEAPKRRSRWDQAPAIAAATP 278
Query: 766 TGNKAMAMATPTPGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPP-GYKVLQPP 824
GN+ +A TP H + + I + +I RN PL+D+EL+ M P GYK+L+PP
Sbjct: 279 VGNQGLA----TPMHPSQVGAPMIPT-SFGTDISGRNAPLSDEELDMMLPSEGYKILEPP 333
Score = 135 (52.6 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 99/421 (23%), Positives = 173/421 (41%)
Query: 666 RRNRWDETPKTERETPGHSSGWAETPKTDRAGPGGDLIQETPTPGGVSS-KRRSRWDETP 724
R+ RWD P T+ ETP P +D A +TP PGG + KRRSRWD+ P
Sbjct: 221 RKQRWDVAP-TD-ETPA-------APTSDDAKAKKSRWDQTPAPGGGEAPKRRSRWDQAP 271
Query: 725 Q---ATPSGAMTPSAATPGGMTPSTPITPHVGSTPLMTPSGVT-PTGNKAMAMATPTPGH 780
ATP G ATP M PS P + ++ SG P ++ + M P+ G+
Sbjct: 272 AIAAATPVG--NQGLATP--MHPSQVGAPMIPTSFGTDISGRNAPLSDEELDMMLPSEGY 327
Query: 781 LAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAACFFIGCSMFA--PT 838
P R R T + + G ++Q P + +G + P
Sbjct: 328 KILEPPPGYAPIR----TPARKLMATPAPIASSTGVGGFMMQEPESARSLGKQLPTEIPG 383
Query: 839 VWHLWIYTRSANANFYFGVTLAFATSQIFLLTDLLFAYLKRDYT-LENG---IQKTIKGK 894
V L + A YFG + + +L + R ++NG ++KT +
Sbjct: 384 VGDLQFFKPEDMA--YFGKLMDTGDESTMSVEELKERKIMRLLLKVKNGTPPMRKTALRQ 441
Query: 895 ---PARLVGASEIINRVVDDLKDEN--EQYRKMVMESIEKTMSNLG------AADIDSRL 943
AR GA + N+++ L +++ +Q R ++++ I++ + L I +
Sbjct: 442 LTDNARQFGAGPLFNQILPLLMEKSLEDQERHLLVKVIDRVLYKLDDLVRPYVHKILVVI 501
Query: 944 EEQLIDGILYAFQE--QTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAK 1001
E LID YA E + ++ G T+++ + +P + + + ++
Sbjct: 502 EPLLIDQDYYARVEGREIISNLAKAAGLATMISTM----RPDIDHV-DEYVRNTTARAFA 556
Query: 1002 VRQQAADLISRIAVVMKTCQEEKLMG--HLGVVLYEYLGEEYPEVLG-SILGALKAIVNV 1058
V A + + + + C+ +K H GV + + + P ++G +IL LK +V+
Sbjct: 557 VVASALGIPALLPFLRAVCRSKKSWQARHTGVKIVQQI----PILMGCAILPHLKGLVDC 612
Query: 1059 I 1059
I
Sbjct: 613 I 613
Score = 120 (47.3 bits), Expect = 5.4e-288, Sum P(3) = 5.4e-288
Identities = 40/129 (31%), Positives = 68/129 (52%)
Query: 174 EKQKRVGLGESGYFDSDIYD--GGGKFEGYVKSIA-DD-DFDYQASFNQNKRSG-YTAPA 228
+ + L ES FD+ +YD G K+ GY SIA DD D D + + N ++ G YTA
Sbjct: 37 DNSTKASLTES--FDTTLYDREGADKYAGYSTSIAVDDGDEDMEDADNGHRLVGQYTATR 94
Query: 229 ALLNDIAQSE--KDYDPFADRRQKT-VAEKEDEYRAIR-RRMIISPERVDPFAEGHLAAM 284
+ +++ A+ ++ D R + ++++E +Y+ R R ++P R DPFA + A
Sbjct: 95 SQIDEFARGNGVEEEDILLGREKAARISDRETDYQKRRFNRGPLTPTRADPFA-ANTHAN 153
Query: 285 TPEQIQAYR 293
++ Q YR
Sbjct: 154 VEQEGQTYR 162
Score = 111 (44.1 bits), Expect = 1.2e-192, Sum P(3) = 1.2e-192
Identities = 39/114 (34%), Positives = 52/114 (45%)
Query: 1 YIPIRTPARKLXXXXX-XXXXXXXXFFIQQEDKTAKYMDNQ-PK-----GNLPFLKPEDA 53
Y PIRTPARKL F+ QE ++A+ + Q P G+L F KPED
Sbjct: 336 YAPIRTPARKLMATPAPIASSTGVGGFMMQEPESARSLGKQLPTEIPGVGDLQFFKPEDM 395
Query: 54 QYFDKLLSNGKHCGKTPDVGSRTYAEVMREQL-VRGEEKEVRK----KLQDKAK 102
YF KL+ G T V ++MR L V+ +RK +L D A+
Sbjct: 396 AYFGKLMDTGDE--STMSVEELKERKIMRLLLKVKNGTPPMRKTALRQLTDNAR 447
Score = 108 (43.1 bits), Expect = 1.6e-196, Sum P(4) = 1.6e-196
Identities = 39/115 (33%), Positives = 54/115 (46%)
Query: 227 PAALLNDIAQSEKDYDPFADRRQKTVAEKEDEYRAIRRRMIISPE--RVDPFAEGHLAA- 283
PAA +D A+++K R +T A E R R +P P LA
Sbjct: 234 PAAPTSDDAKAKKS------RWDQTPAPGGGEAPKRRSRWDQAPAIAAATPVGNQGLATP 287
Query: 284 MTPEQIQA----YRWEREIDERNRPLTDDELEAMFPP-GYKVLQPPAGHLAAMTP 333
M P Q+ A + +I RN PL+D+EL+ M P GYK+L+PP G+ TP
Sbjct: 288 MHPSQVGAPMIPTSFGTDISGRNAPLSDEELDMMLPSEGYKILEPPPGYAPIRTP 342
Score = 86 (35.3 bits), Expect = 2.3e-201, Sum P(4) = 2.3e-201
Identities = 25/72 (34%), Positives = 36/72 (50%)
Query: 278 EGHLAAMTPEQIQA----YRWEREIDERNRPLTDDELEAMFPP-GYKVLQPPAGHLAAMT 332
+G M P Q+ A + +I RN PL+D+EL+ M P GYK+L+PP G+ T
Sbjct: 282 QGLATPMHPSQVGAPMIPTSFGTDISGRNAPLSDEELDMMLPSEGYKILEPPPGYAPIRT 341
Query: 333 PEQ--------I 336
P + I
Sbjct: 342 PARKLMATPAPI 353
Score = 84 (34.6 bits), Expect = 4.5e-113, Sum P(3) = 4.5e-113
Identities = 62/333 (18%), Positives = 130/333 (39%)
Query: 976 LGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYE 1035
+G + P+L + I L+++ AKVR A + +A E L L+
Sbjct: 598 MGCAILPHLKGLVDCIADNLSDEQAKVRTVTALAVGALAEAANPYGIESFDEILNP-LWT 656
Query: 1036 YLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVG 1095
++ + L + L A+ I+ ++ ++ L + E++++ + +V
Sbjct: 657 GARKQRGKGLAAFLKAVGYIIPLMDEEYANYYTSQIMEILLREFSSPDEEMKKVVLKVVS 716
Query: 1096 RIADRGPEYVS-AREWMRICFXXXXXXK--AHKKAIRRATVNTFGYIAKAIGPHDVLATL 1152
+ A S +E + + F + A + R V+T + + +G ++L +
Sbjct: 717 QCASTDGVTASYLKEHVLVDFFKSFWVRRMALDRRNYRQVVDTTVDLGQKVGAGEILERI 776
Query: 1153 LNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNE------YRVPELNVQNGV-LKA 1205
+NNLK + R T + + + L Y E ++++ + L
Sbjct: 777 INNLKDESEPYRKMTVETVEKTIASLGAADISERLEERLIDGVLYAFQEQSIEDIIILNG 836
Query: 1206 LSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVYGFGCEDALTH 1265
+ +G K Y+ + + L ++ RQ A I +AL + G EDAL
Sbjct: 837 FGTVVNALGTRCKPYLPQIVSTILWRLNNKSATVRQQAADLISRIALVMKQCG-EDALMG 895
Query: 1266 LLNYV-WPNIFETSPHLVQAFMDAVEGLRVALG 1297
L V + + E P ++ + + A+ + +G
Sbjct: 896 KLGIVLYEYLGEEYPEVLGSILGALRSIVTVVG 928
Score = 78 (32.5 bits), Expect = 2.4e-196, Sum P(3) = 2.4e-196
Identities = 51/195 (26%), Positives = 71/195 (36%)
Query: 613 RWDETPGHPKPGAETPG-ATPSTRLWDXXXXXXXXXXXXXXRETPSHDKAQSSIRRNRWD 671
RWD P P A T A WD +TP+ ++ RR+RWD
Sbjct: 224 RWDVAPTDETPAAPTSDDAKAKKSRWD---------------QTPAPGGGEAPKRRSRWD 268
Query: 672 ETPKTERETPGHSSGWAETPKTDRAGPGGDLIQETPTPGG--VSSKRRSRWDET-PQATP 728
+ P TP + G A TP + G +I PT G +S + DE P
Sbjct: 269 QAPAIAAATPVGNQGLA-TPMHP-SQVGAPMI---PTSFGTDISGRNAPLSDEELDMMLP 323
Query: 729 SGAMTPSAATPGGMTPSTPITPHVGS-TPLMTPSGV------TPTGNKAMAMATPT--PG 779
S PG TP + + P+ + +GV P +++ PT PG
Sbjct: 324 SEGYKILEPPPGYAPIRTPARKLMATPAPIASSTGVGGFMMQEPESARSLGKQLPTEIPG 383
Query: 780 --HLAAMTPEQIQAY 792
L PE + AY
Sbjct: 384 VGDLQFFKPEDM-AY 397
Score = 76 (31.8 bits), Expect = 2.9e-09, Sum P(4) = 2.9e-09
Identities = 27/128 (21%), Positives = 59/128 (46%)
Query: 489 ILPLLMS----PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYAR 544
+LP LM+ P L Q ++K + + + ++ + YV+ + ++E LID D R
Sbjct: 1051 VLPALMNEYRVPELNVQNG--VLKAMTFLFEYIGEMAKDYVYAVTPLLEDALIDRDQVHR 1108
Query: 545 VEGREIISNLAKAA-GLAT------MISTMRPDIDNIDEYVRNTTARAFAVVASALGIPS 597
++ ++A GL +++ + P+I +V + A + A+G +
Sbjct: 1109 QTAATVVKHIALGVVGLGCEDAMVHLLNLVFPNIFETSPHVIDRVIEAIDAIRMAVGTGT 1168
Query: 598 LLPFLKAG 605
++ ++ AG
Sbjct: 1169 VMNYVWAG 1176
Score = 66 (28.3 bits), Expect = 2.7e-282, Sum P(3) = 2.7e-282
Identities = 16/35 (45%), Positives = 20/35 (57%)
Query: 94 RKKLQDKAKDGTLKAVPTNGEAKAAPKKRGRWDQT 128
RK+ D A A PT+ +AKA K+ RWDQT
Sbjct: 221 RKQRWDVAPTDETPAAPTSDDAKA---KKSRWDQT 252
Score = 59 (25.8 bits), Expect = 1.5e-281, Sum P(3) = 1.5e-281
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 100 KAKDGTLKAVPTNGEAKAAPKKRGRWDQ 127
KAK P G +A PK+R RWDQ
Sbjct: 243 KAKKSRWDQTPAPGGGEA-PKRRSRWDQ 269
Score = 59 (25.8 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 31/152 (20%), Positives = 61/152 (40%)
Query: 1139 IAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPEL-N 1197
+AKA G +++T+ ++ + R T A A+VA +LP L R +
Sbjct: 523 LAKAAGLATMISTMRPDIDHVDEYVRNTTARAFAVVASALGIPALLPFLRAVCRSKKSWQ 582
Query: 1198 VQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVYGF 1257
++ +K + + +G ++ + + D L D R + +A +
Sbjct: 583 ARHTGVKIVQQIPILMGCAILPHLKGLVDCIADNLSDEQAKVRTVTALAVGALAEAANPY 642
Query: 1258 GCEDALTHLLNYVWPNIFETSPHLVQAFMDAV 1289
G E + +LN +W + + AF+ AV
Sbjct: 643 GIE-SFDEILNPLWTGARKQRGKGLAAFLKAV 673
Score = 58 (25.5 bits), Expect = 2.6e-12, Sum P(3) = 2.6e-12
Identities = 59/318 (18%), Positives = 133/318 (41%)
Query: 905 INRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAFQEQTTEDVV 964
I R++ +K+ RK + + GA + +++ L++ L ++Q E +
Sbjct: 420 IMRLLLKVKNGTPPMRKTALRQLTDNARQFGAGPLFNQILPLLMEKSL---EDQ--ERHL 474
Query: 965 MLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMKTCQEEK 1024
++ ++ +L V+PY+ +I I L ++ R + ++IS +A K
Sbjct: 475 LVKVIDRVLYKLDDLVRPYVHKILVVIEPLLIDQDYYARVEGREIISNLA---KAAGLAT 531
Query: 1025 LMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHE 1084
++ + + +++ +EY V + A + + +G I LLP L + +++
Sbjct: 532 MISTMRPDI-DHV-DEY--VRNTTARAFAVVASALG-------IPALLPFLRAVCRSKKS 580
Query: 1085 -KVQENCIDLVGRIAD-RGPEYVSAREWMRICFXXXXXXKAHKKAIRRATVNTFGYIAKA 1142
+ + + +V +I G + + + C + K +R T G +A+A
Sbjct: 581 WQARHTGVKIVQQIPILMGCAILPHLKGLVDCIADNLSDEQAK--VRTVTALAVGALAEA 638
Query: 1143 IGPHDVLA--TLLNNLKVQERQNR----VCTTVAIAIVA-----ETCSPFT--VLPALMN 1189
P+ + + +LN L R+ R A+ + E + +T ++ L+
Sbjct: 639 ANPYGIESFDEILNPLWTGARKQRGKGLAAFLKAVGYIIPLMDEEYANYYTSQIMEILLR 698
Query: 1190 EYRVPELNVQNGVLKALS 1207
E+ P+ ++ VLK +S
Sbjct: 699 EFSSPDEEMKKVVLKVVS 716
Score = 56 (24.8 bits), Expect = 5.0e-07, Sum P(4) = 5.0e-07
Identities = 24/128 (18%), Positives = 56/128 (43%)
Query: 433 LVDVDEDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPL 492
+VD D L + + +++ +K+ + P RK + + GA + ++
Sbjct: 756 VVDTTVD-LGQKVGAGEILERIINNLKDESEPYRKMTVETVEKTIASLGAADISERLEER 814
Query: 493 LMSPTL---EDQ--ERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEG 547
L+ L ++Q E +++ ++ L +PY+ +I+ I L ++ R +
Sbjct: 815 LIDGVLYAFQEQSIEDIIILNGFGTVVNALGTRCKPYLPQIVSTILWRLNNKSATVRQQA 874
Query: 548 REIISNLA 555
++IS +A
Sbjct: 875 ADLISRIA 882
Score = 53 (23.7 bits), Expect = 9.9e-07, Sum P(4) = 9.9e-07
Identities = 26/141 (18%), Positives = 65/141 (46%)
Query: 418 LPFLKPEDAQYFDKLLVDVD-EDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQ--IT 474
+P + E A Y+ ++++ + SP+E ++ ++K++ + + T + + L++ +
Sbjct: 677 IPLMDEEYANYYTSQIMEILLREFSSPDEEMKKVVLKVVSQCAS-TDGVTASYLKEHVLV 735
Query: 475 DKAREFGAG--PLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVI 532
D + F L + ++ T++ ++ ++++RI+ L D PY + +
Sbjct: 736 DFFKSFWVRRMALDRRNYRQVVDTTVDLGQKVGAGEILERIINNLKDESEPYRKMTVETV 795
Query: 533 EPLLID---EDYYARVEGREI 550
E + D R+E R I
Sbjct: 796 EKTIASLGAADISERLEERLI 816
Score = 52 (23.4 bits), Expect = 8.2e-281, Sum P(3) = 8.2e-281
Identities = 24/77 (31%), Positives = 35/77 (45%)
Query: 75 RTYAEVMREQLVRGEEKEVRKKLQDKAKDG---------TLKAVPT-NGEAKAAP----- 119
+TY EVM + + EE+ V+K + +K G TLK N EA +
Sbjct: 159 QTYREVMALREIEKEEERVQKLIAEKQARGENGVQEHEATLKLEDKENAEAGSTVSVATG 218
Query: 120 -KKRGRWDQTSDGDVTP 135
K++ RWD + D TP
Sbjct: 219 RKRKQRWD-VAPTDETP 234
Score = 52 (23.4 bits), Expect = 2.3e-201, Sum P(4) = 2.3e-201
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 501 QERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAA 558
Q RH VK++ +I + + P++ ++ I L DE R + LA+AA
Sbjct: 582 QARHTGVKIVQQIPILMGCAILPHLKGLVDCIADNLSDEQAKVRTVTALAVGALAEAA 639
Score = 50 (22.7 bits), Expect = 1.7e-11, Sum P(3) = 1.7e-11
Identities = 14/69 (20%), Positives = 35/69 (50%)
Query: 1183 VLPALMNEYRVPELNVQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQT 1242
+LP LM + E ++ ++K + + + ++ + Y++ + ++E L+D+D R
Sbjct: 458 ILPLLMEKSL--EDQERHLLVKVIDRVLYKLDDLVRPYVHKILVVIEPLLIDQDYYARVE 515
Query: 1243 ACATIKHMA 1251
I ++A
Sbjct: 516 GREIISNLA 524
Score = 48 (22.0 bits), Expect = 1.5e-06, Sum P(4) = 1.5e-06
Identities = 32/139 (23%), Positives = 56/139 (40%)
Query: 469 ALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVID---RILYKLDDLV--RP 523
ALR I P +LP L +P L ++ + ID RI + + V R
Sbjct: 919 ALRSIVTVVGINQMQPPIRDLLPRL-TPILRNRHEKVQENTIDLVGRIADRGPESVNARE 977
Query: 524 YVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTA 583
++ +++ L + R +AKA G +++T+ ++ + R TA
Sbjct: 978 WMRICFELLDMLKAHKKGIRRA-ANNTFGFIAKAIGPQDVLATLLNNLRVQERQSRVCTA 1036
Query: 584 RAFAVVASALGIPSLLPFL 602
A +VA ++LP L
Sbjct: 1037 VAIGIVAETCAPFTVLPAL 1055
Score = 47 (21.6 bits), Expect = 7.9e-201, Sum P(4) = 7.9e-201
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 431 KLLVDVDEDSLSPEEAKERKIMKL 454
K LVD D+LS E+AK R + L
Sbjct: 607 KGLVDCIADNLSDEQAKVRTVTAL 630
Score = 46 (21.3 bits), Expect = 5.8e-193, Sum P(3) = 5.8e-193
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 612 TRWDETPGHPKPGAETPGATPSTRL-WD 638
+RWD+TP PG G P R WD
Sbjct: 247 SRWDQTPA---PGG---GEAPKRRSRWD 268
Score = 44 (20.5 bits), Expect = 7.2e-109, Sum P(3) = 7.2e-109
Identities = 21/78 (26%), Positives = 29/78 (37%)
Query: 721 DETPQATPS--GAMTPSAATPGGMTPSTPITPHVGSTPLMTPSGVTPTGNKAMAMATPTP 778
+E P+ S GA+ S T G+ P P P +TP + K
Sbjct: 907 EEYPEVLGSILGALR-SIVTVVGINQMQP--PIRDLLPRLTPI-LRNRHEKVQENTIDLV 962
Query: 779 GHLAAMTPEQIQAYRWER 796
G +A PE + A W R
Sbjct: 963 GRIADRGPESVNAREWMR 980
Score = 38 (18.4 bits), Expect = 0.00066, Sum P(4) = 0.00066
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 326 GHLAAMTPEQIQAYRWER 343
G +A PE + A W R
Sbjct: 963 GRIADRGPESVNAREWMR 980
Score = 37 (18.1 bits), Expect = 3.1e-279, Sum P(3) = 3.1e-279
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 242 DPFADRRQKTVAEKEDEYRAIR--RRMIISPERV 273
DPFA V ++ YR + R + ERV
Sbjct: 144 DPFAANTHANVEQEGQTYREVMALREIEKEEERV 177
>UNIPROTKB|G4NCP7 [details] [associations]
symbol:MGG_00356 "Splicing factor 3B subunit 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR016024 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:CM001235 GO:GO:0043581
KO:K12828 InterPro:IPR015016 Pfam:PF08920 RefSeq:XP_003718725.1
ProteinModelPortal:G4NCP7 EnsemblFungi:MGG_00356T0 GeneID:2674968
KEGG:mgr:MGG_00356 Uniprot:G4NCP7
Length = 1215
Score = 1737 (616.5 bits), Expect = 1.8e-287, Sum P(3) = 1.8e-287
Identities = 325/447 (72%), Positives = 384/447 (85%)
Query: 899 VGASEIINRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAFQEQ 958
VGA EI+ R+V +LKDE+E YRKM +E++EK +++LGAAD+ RLEE+LIDGIL+AFQEQ
Sbjct: 758 VGAGEILERIVINLKDESEPYRKMTVETVEKIVASLGAADVGERLEERLIDGILHAFQEQ 817
Query: 959 TTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMK 1018
+ EDV+MLNGFG++VN LG R KPYLPQI TILWRLNNKSA VRQQAADLISRIA+VMK
Sbjct: 818 SVEDVIMLNGFGSVVNALGTRCKPYLPQIVSTILWRLNNKSATVRQQAADLISRIAMVMK 877
Query: 1019 TCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPI 1078
C E+ LMG LGVVLYEYLGEEYPEVLGSILGAL++IV V+G+++M PPIKDLLPRLTPI
Sbjct: 878 QCGEDALMGKLGVVLYEYLGEEYPEVLGSILGALRSIVTVVGISQMQPPIKDLLPRLTPI 937
Query: 1079 LKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFXXXXXXKAHKKAIRRATVNTFGY 1138
L+NRHEKVQEN IDLVGRIADRGPE V+AREWMRICF KAHKK IRRA NTFG+
Sbjct: 938 LRNRHEKVQENTIDLVGRIADRGPESVNAREWMRICFELLDMLKAHKKGIRRAANNTFGF 997
Query: 1139 IAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNV 1198
IAKAIGP DVLATLLNNL+VQERQ+RV T VAI I+AETC+PFTVLPALMNEYRVPELNV
Sbjct: 998 IAKAIGPQDVLATLLNNLRVQERQSRVNTAVAIGIIAETCAPFTVLPALMNEYRVPELNV 1057
Query: 1199 QNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVYGFG 1258
QNGVLK+LSF+FEYIGEM KDY+YAVTPLLEDAL+DRD VHRQTA + +KH+ALGV G G
Sbjct: 1058 QNGVLKSLSFMFEYIGEMAKDYVYAVTPLLEDALIDRDQVHRQTAASVVKHIALGVVGLG 1117
Query: 1259 CEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHPARKVRD 1318
CEDA+ HLLN ++PN+FETSPH++ ++A+E +R+A+GP +L YV GLFHPARKVR
Sbjct: 1118 CEDAMVHLLNLLYPNLFETSPHVIDRIIEAIEAVRMAVGPGLVLNYVWAGLFHPARKVRT 1177
Query: 1319 VYWKIYNSLYIGGQDALISAYPRIQND 1345
YW++YN Y+ G DA++ YP ++ D
Sbjct: 1178 PYWRLYNDAYVQGADAMVPYYPTLEED 1204
Score = 926 (331.0 bits), Expect = 1.8e-287, Sum P(3) = 1.8e-287
Identities = 199/306 (65%), Positives = 227/306 (74%)
Query: 308 DELEAMFPPGYKVLQPPAGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFP-P--G 364
D+ + P G + L P H + P + + E+ RN L+++EL+AM P P G
Sbjct: 267 DQAPSATPVGAQGLATPM-HTSQTAPMAVPV-GFGTEV-HRNMALSNEELDAMLPGPEEG 323
Query: 365 YKVLQPPAGYIPIRTPARKLXXXXXXXXXXXXXFFIQQEDKTAKYMDNQ-PK-----GNL 418
YKVL+PP GY P+R PA KL F+ Q+ T + + Q PK G+L
Sbjct: 324 YKVLEPPPGYEPVRAPAHKLMQTPAPASG-----FVMQDPNTGRITNQQMPKEIPGVGDL 378
Query: 419 PFLKPEDAQYFDKLLVDVDEDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQITDKAR 478
F KPED YF KL +ED LS EE KERKIM+LLLK+KNGTPPMRK ALRQ+TD AR
Sbjct: 379 QFFKPEDMAYFGKLTDGTNEDQLSVEELKERKIMRLLLKVKNGTPPMRKTALRQLTDNAR 438
Query: 479 EFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLID 538
FGAGPLFNQILPLLM TLEDQERHLLVKVIDRILYKLDD+VRPYVHKILVVIEPLLID
Sbjct: 439 NFGAGPLFNQILPLLMEKTLEDQERHLLVKVIDRILYKLDDMVRPYVHKILVVIEPLLID 498
Query: 539 EDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSL 598
+DYYARVEGREIISNLAKAAGLATMISTMRPDID++DEYVRNTTARAFAVVASALGIP+L
Sbjct: 499 QDYYARVEGREIISNLAKAAGLATMISTMRPDIDHVDEYVRNTTARAFAVVASALGIPAL 558
Query: 599 LPFLKA 604
LPFL+A
Sbjct: 559 LPFLQA 564
Score = 140 (54.3 bits), Expect = 1.8e-287, Sum P(3) = 1.8e-287
Identities = 49/153 (32%), Positives = 80/153 (52%)
Query: 178 RVGLGESGYFDSDIYD---GGGKFEGYVKSI--ADDDFDYQASFNQNKRS--G-YTAPAA 229
+V L E+ FD+D+YD G K+ GY +S+ AD D + N RS G YTA A
Sbjct: 39 KVKLNEA--FDTDLYDRENGVDKYAGYHRSLPAADGDDEEMGDAGANGRSLVGQYTATRA 96
Query: 230 LLNDIAQS---EKDYDPFADRRQKT--VAEKEDEYRAIRRRMIISPERVDPFAEGHLAAM 284
+++ A+ E+D D A R +K+ + ++E +Y+ R +++P R DPFA G +
Sbjct: 97 QIDEFARGSGVEED-DILAGRGEKSNRITDRETDYQKRRFDRVLTPTRADPFAAGAEGSS 155
Query: 285 TPEQIQAYRWEREIDERNRPLTDDELEAMFPPG 317
+ ++ ERE +ER R + + + M G
Sbjct: 156 YRDVMEEREIERE-EERVRRAIEAKNKDMIANG 187
Score = 126 (49.4 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 101/432 (23%), Positives = 176/432 (40%)
Query: 657 SHDKAQSSIRRNRWDETPKTERETPGHSSGWAETPKTDRAGPGGDLIQETPTPGGVSSKR 716
S D + R+ RWD T+ T + PK R D PG +K+
Sbjct: 208 SEDASAGRKRKKRWD-VATTDDATAAAPTPTDAKPKRSR----WDQAPALEVPGAEPTKK 262
Query: 717 RSRWDETPQATPSGAMTPSAATPGGMTPSTPITPHVGST-PLMTPSGVTPTGNKAMAMAT 775
RSRWD+ P ATP GA G+ +TP+ H T P+ P G ++ MA++
Sbjct: 263 RSRWDQAPSATPVGAQ--------GL--ATPM--HTSQTAPMAVPVGFGTEVHRNMALSN 310
Query: 776 PTPGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPP----GYKVLQPPAACFFIG 831
L AM P + Y+ E P+ + M P G+ V+Q P
Sbjct: 311 E---ELDAMLPGPEEGYK-VLEPPPGYEPVRAPAHKLMQTPAPASGF-VMQDPNTGRITN 365
Query: 832 CSM--FAPTVWHLWIYTRSANANFYFGVTLAFATSQIFLLTDLLFA--YLKRDYTLENG- 886
M P V L + A YFG L T++ L + L ++ ++NG
Sbjct: 366 QQMPKEIPGVGDLQFFKPEDMA--YFG-KLTDGTNEDQLSVEELKERKIMRLLLKVKNGT 422
Query: 887 --IQKTIKGK---PARLVGASEIINRVVDDLKDEN--EQYRKMVMESIEKTMSNLG---- 935
++KT + AR GA + N+++ L ++ +Q R ++++ I++ + L
Sbjct: 423 PPMRKTALRQLTDNARNFGAGPLFNQILPLLMEKTLEDQERHLLVKVIDRILYKLDDMVR 482
Query: 936 --AADIDSRLEEQLIDGILYAFQE--QTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTI 991
I +E LID YA E + ++ G T+++ + +P + +
Sbjct: 483 PYVHKILVVIEPLLIDQDYYARVEGREIISNLAKAAGLATMISTM----RPDIDHV-DEY 537
Query: 992 LWRLNNKSAKVRQQAADLISRIAVVMKTCQEEKLMG--HLGVVLYEYLGEEYPEVLG-SI 1048
+ ++ V A + + + + C+ +K H GV + + + P ++G ++
Sbjct: 538 VRNTTARAFAVVASALGIPALLPFLQAVCRSKKSWQARHTGVKIVQQI----PILMGCAV 593
Query: 1049 LGALKAIVNVIG 1060
L LK +V+ IG
Sbjct: 594 LPHLKRLVDCIG 605
Score = 85 (35.0 bits), Expect = 9.6e-191, Sum P(3) = 9.6e-191
Identities = 24/65 (36%), Positives = 30/65 (46%)
Query: 1 YIPIRTPARKLXXXXXXXXXXXXXFFIQQEDKTAKYMDNQ-PK-----GNLPFLKPEDAQ 54
Y P+R PA KL F+ Q+ T + + Q PK G+L F KPED
Sbjct: 333 YEPVRAPAHKLMQTPAPASG-----FVMQDPNTGRITNQQMPKEIPGVGDLQFFKPEDMA 387
Query: 55 YFDKL 59
YF KL
Sbjct: 388 YFGKL 392
Score = 82 (33.9 bits), Expect = 3.5e-199, Sum P(5) = 3.5e-199
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 301 RNRPLTDDELEAMFP-P--GYKVLQPPAGHLAAMTP 333
RN L+++EL+AM P P GYKVL+PP G+ P
Sbjct: 304 RNMALSNEELDAMLPGPEEGYKVLEPPPGYEPVRAP 339
Score = 78 (32.5 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 30/133 (22%), Positives = 60/133 (45%)
Query: 489 ILPLLMS----PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYAR 544
+LP LM+ P L Q ++K + + + ++ + YV+ + ++E LID D R
Sbjct: 1042 VLPALMNEYRVPELNVQNG--VLKSLSFMFEYIGEMAKDYVYAVTPLLEDALIDRDQVHR 1099
Query: 545 VEGREIISNLAKAA-GLAT------MISTMRPDIDNIDEYVRNTTARAFAVVASALGIPS 597
++ ++A GL +++ + P++ +V + A V A+G
Sbjct: 1100 QTAASVVKHIALGVVGLGCEDAMVHLLNLLYPNLFETSPHVIDRIIEAIEAVRMAVGPGL 1159
Query: 598 LLPFLKAGGVTPA 610
+L ++ AG PA
Sbjct: 1160 VLNYVWAGLFHPA 1172
Score = 76 (31.8 bits), Expect = 6.6e-112, Sum P(3) = 6.6e-112
Identities = 70/340 (20%), Positives = 129/340 (37%)
Query: 976 LGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYE 1035
+G V P+L ++ I LN++ KVR + I+ +A E L +
Sbjct: 589 MGCAVLPHLKRLVDCIGPNLNDEQTKVRTVTSLAIAALAEAANPYGIESFDDILNPL--- 645
Query: 1036 YLGEEYPEVLGSILGALKAIVNVIGMTK------MTPPIKDLLPR--LTPI--LKNRHEK 1085
+ G G + G LKA+ +I + T I ++L R +P +K K
Sbjct: 646 WTGARKQRGKG-LAGFLKAVGYIIPLMDEEYANYYTSQIMEILLREFSSPDEEMKKVVLK 704
Query: 1086 VQENCIDLVGRIADRGPEYVSAREWMRICFXXXXXXKAHKKAIRRATVNTFGYIAKAIGP 1145
V C G A E+V + K + + + TV+ I + +G
Sbjct: 705 VVSQCAGTEGVTAGYLKEHVLDEFFKSFWVRRMALDKRNYRQVVETTVD----IGQKVGA 760
Query: 1146 HDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNE------YRVPELNVQ 1199
++L ++ NLK + R T + + + V L + E +V+
Sbjct: 761 GEILERIVINLKDESEPYRKMTVETVEKIVASLGAADVGERLEERLIDGILHAFQEQSVE 820
Query: 1200 NGV-LKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVYGFG 1258
+ + L + +G K Y+ + + L ++ RQ A I +A+ + G
Sbjct: 821 DVIMLNGFGSVVNALGTRCKPYLPQIVSTILWRLNNKSATVRQQAADLISRIAMVMKQCG 880
Query: 1259 CEDALTHLLNYV-WPNIFETSPHLVQAFMDAVEGLRVALG 1297
EDAL L V + + E P ++ + + A+ + +G
Sbjct: 881 -EDALMGKLGVVLYEYLGEEYPEVLGSILGALRSIVTVVG 919
Score = 65 (27.9 bits), Expect = 3.5e-199, Sum P(5) = 3.5e-199
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 501 QERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAA 558
Q RH VK++ +I + V P++ +++ I P L DE R I+ LA+AA
Sbjct: 573 QARHTGVKIVQQIPILMGCAVLPHLKRLVDCIGPNLNDEQTKVRTVTSLAIAALAEAA 630
Score = 62 (26.9 bits), Expect = 2.6e-282, Sum P(4) = 2.6e-282
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 56 FDKLLSNGKHCGKTPDVGSRTYAEVMREQLVRGEEKEVRKKLQDKAKD 103
FD++L+ + +Y +VM E+ + EE+ VR+ ++ K KD
Sbjct: 135 FDRVLTPTRADPFAAGAEGSSYRDVMEEREIEREEERVRRAIEAKNKD 182
Score = 59 (25.8 bits), Expect = 6.5e-279, Sum P(3) = 6.5e-279
Identities = 18/35 (51%), Positives = 19/35 (54%)
Query: 94 RKKLQDKAK-DGTLKAVPTNGEAKAAPKKRGRWDQ 127
RKK D A D A PT +AK PK R RWDQ
Sbjct: 217 RKKRWDVATTDDATAAAPTPTDAK--PK-RSRWDQ 248
Score = 58 (25.5 bits), Expect = 6.5e-06, Sum P(3) = 6.5e-06
Identities = 30/163 (18%), Positives = 71/163 (43%)
Query: 453 KLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTL---EDQ--ERHLLV 507
++++ +K+ + P RK + + GA + ++ L+ L ++Q E +++
Sbjct: 766 RIVINLKDESEPYRKMTVETVEKIVASLGAADVGERLEERLIDGILHAFQEQSVEDVIML 825
Query: 508 KVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLA---KAAGLATMI 564
++ L +PY+ +I+ I L ++ R + ++IS +A K G ++
Sbjct: 826 NGFGSVVNALGTRCKPYLPQIVSTILWRLNNKSATVRQQAADLISRIAMVMKQCGEDALM 885
Query: 565 STMRPDIDNI--DEY--VRNTTARAFAVVASALGIPSLLPFLK 603
+ + +EY V + A + + +GI + P +K
Sbjct: 886 GKLGVVLYEYLGEEYPEVLGSILGALRSIVTVVGISQMQPPIK 928
Score = 57 (25.1 bits), Expect = 1.1e-195, Sum P(3) = 1.1e-195
Identities = 13/30 (43%), Positives = 15/30 (50%)
Query: 609 PAATRWDETPGHPKPGAETPGATPSTRLWD 638
P +RWD+ P PGAE P T WD
Sbjct: 241 PKRSRWDQAPALEVPGAE-P--TKKRSRWD 267
Score = 56 (24.8 bits), Expect = 1.3e-195, Sum P(3) = 1.3e-195
Identities = 27/141 (19%), Positives = 66/141 (46%)
Query: 418 LPFLKPEDAQYFDKLLVDVD-EDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQ-ITD 475
+P + E A Y+ ++++ + SP+E ++ ++K++ + GT + L++ + D
Sbjct: 668 IPLMDEEYANYYTSQIMEILLREFSSPDEEMKKVVLKVVSQCA-GTEGVTAGYLKEHVLD 726
Query: 476 KA-REFGAG--PLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVI 532
+ + F L + ++ T++ ++ ++++RI+ L D PY + +
Sbjct: 727 EFFKSFWVRRMALDKRNYRQVVETTVDIGQKVGAGEILERIVINLKDESEPYRKMTVETV 786
Query: 533 EPLLID---EDYYARVEGREI 550
E ++ D R+E R I
Sbjct: 787 EKIVASLGAADVGERLEERLI 807
Score = 56 (24.8 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 15/69 (21%), Positives = 35/69 (50%)
Query: 1183 VLPALMNEYRVPELNVQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQT 1242
+LP LM + E ++ ++K + + + +M + Y++ + ++E L+D+D R
Sbjct: 449 ILPLLME--KTLEDQERHLLVKVIDRILYKLDDMVRPYVHKILVVIEPLLIDQDYYARVE 506
Query: 1243 ACATIKHMA 1251
I ++A
Sbjct: 507 GREIISNLA 515
Score = 52 (23.4 bits), Expect = 3.6e-278, Sum P(3) = 3.6e-278
Identities = 14/54 (25%), Positives = 27/54 (50%)
Query: 82 REQLVRGEEKEVRKKLQD-KAKDGTLKAVPTNGEAKAAPKKRGRWDQTSDGDVT 134
++ + G+ E + L+D + KD + + +A A K++ RWD + D T
Sbjct: 181 KDMIANGDVPEHQPTLKDTEIKDDS----KDSEDASAGRKRKKRWDVATTDDAT 230
Score = 51 (23.0 bits), Expect = 2.8e-109, Sum P(3) = 2.8e-109
Identities = 57/258 (22%), Positives = 101/258 (39%)
Query: 721 DETPQATPS--GAMTPSAATPGGMTPSTPITPHVGSTPLMTPSGVTPTGNKAMAMATPTP 778
+E P+ S GA+ S T G++ P P P +TP + K
Sbjct: 898 EEYPEVLGSILGALR-SIVTVVGISQMQP--PIKDLLPRLTPI-LRNRHEKVQENTIDLV 953
Query: 779 GHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAACFF---IGCS-M 834
G +A PE + A W R E L D L+A G + F IG +
Sbjct: 954 GRIADRGPESVNAREWMRICFE----LLD-MLKA-HKKGIRRAANNTFGFIAKAIGPQDV 1007
Query: 835 FAPTVWHLWIYTRSANANFYFGVTLAFATSQIF-LLTDLLFAYLKRDYTLENGIQKTIKG 893
A + +L + R + N + + T F +L L+ Y + ++NG+ K++
Sbjct: 1008 LATLLNNLRVQERQSRVNTAVAIGIIAETCAPFTVLPALMNEYRVPELNVQNGVLKSLSF 1067
Query: 894 KPARLVG--ASEIINRVVDDLKD---ENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLI 948
+G A + + V L+D + +Q + S+ K ++ LG + E+ ++
Sbjct: 1068 M-FEYIGEMAKDYVYAVTPLLEDALIDRDQVHRQTAASVVKHIA-LGVVGLGC--EDAMV 1123
Query: 949 D--GILYAFQEQTTEDVV 964
+LY +T+ V+
Sbjct: 1124 HLLNLLYPNLFETSPHVI 1141
Score = 49 (22.3 bits), Expect = 7.3e-195, Sum P(3) = 7.3e-195
Identities = 14/40 (35%), Positives = 18/40 (45%)
Query: 600 PFLKAGGVTPAA--TRWDETPGHPKPGAE---TPGATPST 634
P L+ G P +RWD+ P GA+ TP T T
Sbjct: 250 PALEVPGAEPTKKRSRWDQAPSATPVGAQGLATPMHTSQT 289
Score = 49 (22.3 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 31/139 (22%), Positives = 56/139 (40%)
Query: 469 ALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVID---RILYKLDDLV--RP 523
ALR I P +LP L +P L ++ + ID RI + + V R
Sbjct: 910 ALRSIVTVVGISQMQPPIKDLLPRL-TPILRNRHEKVQENTIDLVGRIADRGPESVNARE 968
Query: 524 YVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTA 583
++ +++ L + R +AKA G +++T+ ++ + R TA
Sbjct: 969 WMRICFELLDMLKAHKKGIRRA-ANNTFGFIAKAIGPQDVLATLLNNLRVQERQSRVNTA 1027
Query: 584 RAFAVVASALGIPSLLPFL 602
A ++A ++LP L
Sbjct: 1028 VAIGIIAETCAPFTVLPAL 1046
Score = 47 (21.6 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 30/152 (19%), Positives = 59/152 (38%)
Query: 1139 IAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPEL-N 1197
+AKA G +++T+ ++ + R T A A+VA +LP L R +
Sbjct: 514 LAKAAGLATMISTMRPDIDHVDEYVRNTTARAFAVVASALGIPALLPFLQAVCRSKKSWQ 573
Query: 1198 VQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVYGF 1257
++ +K + + +G ++ + + L D R I +A +
Sbjct: 574 ARHTGVKIVQQIPILMGCAVLPHLKRLVDCIGPNLNDEQTKVRTVTSLAIAALAEAANPY 633
Query: 1258 GCEDALTHLLNYVWPNIFETSPHLVQAFMDAV 1289
G E + +LN +W + + F+ AV
Sbjct: 634 GIE-SFDDILNPLWTGARKQRGKGLAGFLKAV 664
Score = 43 (20.2 bits), Expect = 2.6e-282, Sum P(4) = 2.6e-282
Identities = 9/12 (75%), Positives = 9/12 (75%)
Query: 117 AAP-KKRGRWDQ 127
A P KKR RWDQ
Sbjct: 257 AEPTKKRSRWDQ 268
Score = 38 (18.4 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 326 GHLAAMTPEQIQAYRWER 343
G +A PE + A W R
Sbjct: 954 GRIADRGPESVNAREWMR 971
Score = 37 (18.1 bits), Expect = 8.4e-108, Sum P(3) = 8.4e-108
Identities = 6/17 (35%), Positives = 9/17 (52%)
Query: 1128 IRRATVNTFGYIAKAIG 1144
+R T F +A A+G
Sbjct: 538 VRNTTARAFAVVASALG 554
>POMBASE|SPAC27F1.09c [details] [associations]
symbol:prp10 "U2 snRNP-associated protein Sap155"
species:4896 "Schizosaccharomyces pombe" [GO:0000245 "spliceosomal
complex assembly" evidence=ISO] [GO:0003729 "mRNA binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0005686 "U2 snRNP"
evidence=ISO] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=IMP] InterPro:IPR016024 PomBase:SPAC27F1.09c EMBL:CU329670
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GenomeReviews:CU329670_GR GO:GO:0003729
GO:GO:0005681 GO:GO:0000245 GO:GO:0005686 GO:GO:0045292
HOGENOM:HOG000166737 KO:K12828 InterPro:IPR015016 Pfam:PF08920
EMBL:AB027815 PIR:T38467 RefSeq:NP_594538.2 IntAct:Q10178
STRING:Q10178 GeneID:2541619 KEGG:spo:SPAC27F1.09c OMA:PKEWMRI
OrthoDB:EOG4350F5 NextBio:20802713 Uniprot:Q10178
Length = 1205
Score = 1647 (584.8 bits), Expect = 7.5e-263, Sum P(3) = 7.5e-263
Identities = 306/455 (67%), Positives = 372/455 (81%)
Query: 896 ARLVGASEIINRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAF 955
A+ VG+ +I+ RVV++ KDE+E YRKM E+++K + +LG ++ID RLEE L+DG+L+AF
Sbjct: 742 AQQVGSRQIVERVVNNFKDESEPYRKMTAETVDKVIGSLGVSEIDERLEELLLDGVLFAF 801
Query: 956 QEQTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAV 1015
QEQ+ E+ V+L F T+VN LG R KPYLPQI TIL+RLNNKSA VR+QAADL+S I +
Sbjct: 802 QEQSVEEKVILTCFSTVVNALGTRCKPYLPQIVSTILYRLNNKSANVREQAADLVSSITI 861
Query: 1016 VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL 1075
V+K C EE LM LGVVLYEYLGEEYPEVLGSILGA+KAIV+V+GM+ M PPI+DLLPRL
Sbjct: 862 VLKACGEEALMRKLGVVLYEYLGEEYPEVLGSILGAIKAIVSVVGMSSMQPPIRDLLPRL 921
Query: 1076 TPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFXXXXXXKAHKKAIRRATVNT 1135
TPIL+NRHEKVQEN IDLVG+IADRG EYVSAREWMRICF KAHKK+IRRA VNT
Sbjct: 922 TPILRNRHEKVQENTIDLVGKIADRGSEYVSAREWMRICFELIDMLKAHKKSIRRAAVNT 981
Query: 1136 FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE 1195
FGYI+KAIGP DVLATLLNNLKVQERQNRVCTTVAIAIVAETC PFTV+PALM +YR PE
Sbjct: 982 FGYISKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCMPFTVVPALMADYRTPE 1041
Query: 1196 LNVQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVY 1255
+NVQNGVLK+L+F+FEYIGE +DY+YA+TPLL DALMDRD VHRQTA + IKH++LG
Sbjct: 1042 MNVQNGVLKSLAFMFEYIGEQARDYVYAITPLLADALMDRDAVHRQTAASVIKHLSLGCV 1101
Query: 1256 GFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHPARK 1315
G G EDA+ HLLN +WPNI E SPH++ A + ++G+R +G I+ Y++QGLFHP+RK
Sbjct: 1102 GLGVEDAMIHLLNILWPNILEESPHVINAVREGIDGIRNCIGVGPIMAYLVQGLFHPSRK 1161
Query: 1316 VRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVY 1350
VR+ YW YNS Y+ DA++ YP + +D N Y
Sbjct: 1162 VRNTYWTSYNSAYVQSADAMVPYYPHVDDDQFNNY 1196
Score = 806 (288.8 bits), Expect = 7.5e-263, Sum P(3) = 7.5e-263
Identities = 169/267 (63%), Positives = 202/267 (75%)
Query: 345 IDERNRP----LTDDELEAMFPP-GYKVLQPPAGYIPIRTPA--RKLXXXXXXXXXXXXX 397
++E+ RP LT++EL + P GY +L+PP GY+ P +K
Sbjct: 285 VEEKLRPPVRLLTEEELNELLPSEGYAILEPPPGYLESIHPELLQKGTTLDTYHVPQEQE 344
Query: 398 FFIQQEDKTAKYMDNQPKGNLPFLKPEDAQYFDKLLVDVDEDSLSPEEAKERKIMKLLLK 457
+++E A + G+L F K ED +YF KLL DE L+ E +ERKI++LLLK
Sbjct: 345 LPLEKELPAALPTEIPGVGDLAFFKQEDVKYFGKLLKVEDEAKLTIAELRERKILRLLLK 404
Query: 458 IKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKL 517
+KNGTPPMRK+ALRQ+TD+AR+FGA LFNQILPLLM TLEDQERHLLVKVIDRILYKL
Sbjct: 405 VKNGTPPMRKSALRQLTDQARDFGAAALFNQILPLLMERTLEDQERHLLVKVIDRILYKL 464
Query: 518 DDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEY 577
DDLVRP+ HKILVVIEPLLIDEDYYAR EGREIISNLAKA+GLA MI+TMRPDID++DEY
Sbjct: 465 DDLVRPFTHKILVVIEPLLIDEDYYARAEGREIISNLAKASGLAHMIATMRPDIDHVDEY 524
Query: 578 VRNTTARAFAVVASALGIPSLLPFLKA 604
VRNTTARAF+VVASALG+P+LLPFLKA
Sbjct: 525 VRNTTARAFSVVASALGVPALLPFLKA 551
Score = 117 (46.2 bits), Expect = 7.5e-263, Sum P(3) = 7.5e-263
Identities = 49/188 (26%), Positives = 90/188 (47%)
Query: 150 DVNIEA--QIRDIQNRKKDVSEGGGEEKQKRV-GLGESG--YFDSDIYDGGGKFEGY--- 201
DV IE R++ R+K+ ++ + G +S +++ ++ E Y
Sbjct: 23 DVEIERLRAERELLRRQKEAAKNSSTNGSVNIEGTQDSNDLQYNAHLFKSSNPKEEYDSA 82
Query: 202 --VKS-IADDDFDYQAS--FNQNKR--SGYTAPAALLNDIAQSEKDYDPFADRR-QKTVA 253
V++ I+ D+ DY+ + N + R Y AP LLN+ A ++ YDP +R+ +K +
Sbjct: 83 IDVRNDISQDEDDYKRTNDVNDSYRLVRQYEAPKELLNEYA--DESYDPMQERQSKKQIQ 140
Query: 254 EKEDEYRAIRRRMIISPERVDPF------AEGHLAAMTPEQIQAYRWER----EIDERNR 303
++E +Y+ R ++P RVD F + G A Q++ + ER E+++R R
Sbjct: 141 DRESDYQKQRYDRQLTPTRVDAFQPDGTQSNGRSYAEVMRQVELEKEERRVHMELNQRRR 200
Query: 304 PLTDDELE 311
T E+E
Sbjct: 201 EGTLKEVE 208
Score = 88 (36.0 bits), Expect = 8.6e-260, Sum P(3) = 8.6e-260
Identities = 25/72 (34%), Positives = 38/72 (52%)
Query: 54 QYFDKLLSNGKHCGKTPD---VGSRTYAEVMREQLVRGEEKEVRKKLQDKAKDGTLKAVP 110
Q +D+ L+ + PD R+YAEVMR+ + EE+ V +L + ++GTLK V
Sbjct: 149 QRYDRQLTPTRVDAFQPDGTQSNGRSYAEVMRQVELEKEERRVHMELNQRRREGTLKEVE 208
Query: 111 TNGEAKAAPKKR 122
E + KKR
Sbjct: 209 E--EESISDKKR 218
Score = 88 (36.0 bits), Expect = 8.6e-260, Sum P(3) = 8.6e-260
Identities = 46/176 (26%), Positives = 74/176 (42%)
Query: 193 DGGGKFEGYVKSIADDDFDYQASF--NQNKRSGYTAPAALLNDIAQSEKDYDPFADRRQK 250
+G EG S +D Y A + N + Y + + NDI+Q E DY K
Sbjct: 49 NGSVNIEGTQDS---NDLQYNAHLFKSSNPKEEYDSAIDVRNDISQDEDDY--------K 97
Query: 251 TVAEKEDEYRAIRRRMIISPERVDPFAEGHLAAMTPEQIQAYRWEREID---ER-NRPLT 306
+ D YR +R+ E ++ +A+ M Q + +RE D +R +R LT
Sbjct: 98 RTNDVNDSYRLVRQYEA-PKELLNEYADESYDPMQERQSKKQIQDRESDYQKQRYDRQLT 156
Query: 307 DDELEAMFPPGYKVLQPPAGHLAAMTPEQIQAYRWER----EIDERNRPLTDDELE 358
++A P G + G A Q++ + ER E+++R R T E+E
Sbjct: 157 PTRVDAFQPDGTQ----SNGRSYAEVMRQVELEKEERRVHMELNQRRREGTLKEVE 208
Score = 88 (36.0 bits), Expect = 3.0e-193, Sum P(4) = 3.0e-193
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 298 IDERNRP----LTDDELEAMFPP-GYKVLQPPAGHLAAMTPEQIQ 337
++E+ RP LT++EL + P GY +L+PP G+L ++ PE +Q
Sbjct: 285 VEEKLRPPVRLLTEEELNELLPSEGYAILEPPPGYLESIHPELLQ 329
Score = 71 (30.1 bits), Expect = 3.0e-193, Sum P(4) = 3.0e-193
Identities = 28/103 (27%), Positives = 48/103 (46%)
Query: 501 QERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAA-- 558
Q RH V++I +I L + P++ ++ I L DE R+ +S LA+AA
Sbjct: 560 QARHTGVRIIQQIALLLGCSILPHLKNLVDCIGHGLEDEQQKVRIMTALSLSALAEAATP 619
Query: 559 -GLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLP 600
G+ S ++P + + R + AF + A+ IP + P
Sbjct: 620 YGIEAFDSVLKPLWSGVQRH-RGKSLAAF-LKATGFIIPLMEP 660
Score = 71 (30.1 bits), Expect = 3.2e-88, Sum P(3) = 3.2e-88
Identities = 60/333 (18%), Positives = 128/333 (38%)
Query: 976 LGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYE 1035
LG + P+L + I L ++ KVR A +S +A E L L+
Sbjct: 576 LGCSILPHLKNLVDCIGHGLEDEQQKVRIMTALSLSALAEAATPYGIEAFDSVLKP-LWS 634
Query: 1036 YLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVG 1095
+ + L + L A I+ ++ + + ++ L + E++++ + +V
Sbjct: 635 GVQRHRGKSLAAFLKATGFIIPLMEPEYASHFTRRIMKILLREFNSPDEEMKKIVLKVVS 694
Query: 1096 RIADRG---PEYVSAREWMRICFXXXXXXKAHKKAIRRATVNTFGYIAKAIGPHDVLATL 1152
+ A PEY+ A + + V T +A+ +G ++ +
Sbjct: 695 QCASTDGVTPEYLRTDVLPEFFHCFWSRRMASDRRSYKQVVETTVVLAQQVGSRQIVERV 754
Query: 1153 LNNLKVQERQNRVCTTVAIAIVAETCSPFTV---LPALMNE---YRVPELNVQNGV-LKA 1205
+NN K + R T + V + + L L+ + + E +V+ V L
Sbjct: 755 VNNFKDESEPYRKMTAETVDKVIGSLGVSEIDERLEELLLDGVLFAFQEQSVEEKVILTC 814
Query: 1206 LSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVYGFGCEDALTH 1265
S + +G K Y+ + + L ++ R+ A + + + + G E+AL
Sbjct: 815 FSTVVNALGTRCKPYLPQIVSTILYRLNNKSANVREQAADLVSSITIVLKACG-EEALMR 873
Query: 1266 LLNYV-WPNIFETSPHLVQAFMDAVEGLRVALG 1297
L V + + E P ++ + + A++ + +G
Sbjct: 874 KLGVVLYEYLGEEYPEVLGSILGAIKAIVSVVG 906
Score = 70 (29.7 bits), Expect = 3.7e-185, Sum P(3) = 3.7e-185
Identities = 25/92 (27%), Positives = 43/92 (46%)
Query: 704 QETPTPGGVSS-KRRSRWDETPQA-TPSGAMTPSAATPGGMTPSTPITPHVGSTP--LMT 759
Q P+ VS+ KRRSRWD+ P+ T S + + + + + P L+T
Sbjct: 238 QAPPSVTQVSTTKRRSRWDKAPENFTISEHVIENGISEDLINKEVNVVEEKLRPPVRLLT 297
Query: 760 PSGVTPT-GNKAMAMATPTPGHLAAMTPEQIQ 790
+ ++ A+ P PG+L ++ PE +Q
Sbjct: 298 EEELNELLPSEGYAILEPPPGYLESIHPELLQ 329
Score = 66 (28.3 bits), Expect = 1.3e-08, Sum P(4) = 1.3e-08
Identities = 26/131 (19%), Positives = 58/131 (44%)
Query: 489 ILPLLMSP--TLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVE 546
++P LM+ T E ++ ++K + + + + R YV+ I ++ L+D D R
Sbjct: 1029 VVPALMADYRTPEMNVQNGVLKSLAFMFEYIGEQARDYVYAITPLLADALMDRDAVHRQT 1088
Query: 547 GREIISNLAKAA-GLAT------MISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLL 599
+I +L+ GL +++ + P+I +V N + + +G+ ++
Sbjct: 1089 AASVIKHLSLGCVGLGVEDAMIHLLNILWPNILEESPHVINAVREGIDGIRNCIGVGPIM 1148
Query: 600 PFLKAGGVTPA 610
+L G P+
Sbjct: 1149 AYLVQGLFHPS 1159
Score = 66 (28.3 bits), Expect = 4.8e-08, Sum P(3) = 4.8e-08
Identities = 34/170 (20%), Positives = 74/170 (43%)
Query: 444 EEAKERKIMKLLLK-IKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTL-EDQ 501
++ R+I++ ++ K+ + P RK + G + ++ LL+ L Q
Sbjct: 743 QQVGSRQIVERVVNNFKDESEPYRKMTAETVDKVIGSLGVSEIDERLEELLLDGVLFAFQ 802
Query: 502 ERHLLVKVI----DRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLA-- 555
E+ + KVI ++ L +PY+ +I+ I L ++ R + +++S++
Sbjct: 803 EQSVEEKVILTCFSTVVNALGTRCKPYLPQIVSTILYRLNNKSANVREQAADLVSSITIV 862
Query: 556 -KAAGLATMISTMRPDIDNI--DEY--VRNTTARAFAVVASALGIPSLLP 600
KA G ++ + + +EY V + A + S +G+ S+ P
Sbjct: 863 LKACGEEALMRKLGVVLYEYLGEEYPEVLGSILGAIKAIVSVVGMSSMQP 912
Score = 64 (27.6 bits), Expect = 1.1e-179, Sum P(3) = 1.1e-179
Identities = 17/45 (37%), Positives = 23/45 (51%)
Query: 43 GNLPFLKPEDAQYFDKLLSNGKHCGKTPDVGSRTYAEVMREQLVR 87
G+L F K ED +YF KLL K D T AE+ +++R
Sbjct: 363 GDLAFFKQEDVKYFGKLL-------KVEDEAKLTIAELRERKILR 400
Score = 61 (26.5 bits), Expect = 2.1e-188, Sum P(4) = 2.1e-188
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 798 IDERNRP----LTDDELEAMFPP-GYKVLQPP 824
++E+ RP LT++EL + P GY +L+PP
Sbjct: 285 VEEKLRPPVRLLTEEELNELLPSEGYAILEPP 316
Score = 56 (24.8 bits), Expect = 4.8e-07, Sum P(3) = 4.8e-07
Identities = 63/319 (19%), Positives = 127/319 (39%)
Query: 905 INRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAFQEQTTEDV- 963
I R++ +K+ RK + + + GAA L + IL E+T ED
Sbjct: 398 ILRLLLKVKNGTPPMRKSALRQLTDQARDFGAA--------ALFNQILPLLMERTLEDQE 449
Query: 964 --VMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMKTCQ 1021
+++ I+ +L V+P+ +I I L ++ R + ++IS +A
Sbjct: 450 RHLLVKVIDRILYKLDDLVRPFTHKILVVIEPLLIDEDYYARAEGREIISNLA------- 502
Query: 1022 EEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKN 1081
+ + H+ + + V + A + + +G+ + P +K + R +
Sbjct: 503 KASGLAHMIATMRPDIDHVDEYVRNTTARAFSVVASALGVPALLPFLKAVC-RSKKSWQA 561
Query: 1082 RHEKVQENCIDLVGRIADRGPEYVSAREWMRICFXXXXXXKAHKKAIRRATVNTFGYIAK 1141
RH V+ I + + G + + + C + K +R T + +A+
Sbjct: 562 RHTGVR--IIQQIALLL--GCSILPHLKNLVDCIGHGLEDEQQK--VRIMTALSLSALAE 615
Query: 1142 AIGPHDVLA--TLLNNL--KVQERQNRV------CTTVAIAIVA-ETCSPFT--VLPALM 1188
A P+ + A ++L L VQ + + T I ++ E S FT ++ L+
Sbjct: 616 AATPYGIEAFDSVLKPLWSGVQRHRGKSLAAFLKATGFIIPLMEPEYASHFTRRIMKILL 675
Query: 1189 NEYRVPELNVQNGVLKALS 1207
E+ P+ ++ VLK +S
Sbjct: 676 REFNSPDEEMKKIVLKVVS 694
Score = 54 (24.1 bits), Expect = 7.6e-07, Sum P(3) = 7.6e-07
Identities = 23/123 (18%), Positives = 52/123 (42%)
Query: 1183 VLPALMNEYRVPELNVQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQT 1242
+LP LM R E ++ ++K + + + ++ + + + + ++E L+D D R
Sbjct: 436 ILPLLME--RTLEDQERHLLVKVIDRILYKLDDLVRPFTHKILVVIEPLLIDEDYYARAE 493
Query: 1243 ACATIKHMALGVYGFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRIL 1302
I ++A L H++ + P+I ++ A + ALG +L
Sbjct: 494 GREIISNLAKA-------SGLAHMIATMRPDIDHVDEYVRNTTARAFSVVASALGVPALL 546
Query: 1303 QYV 1305
++
Sbjct: 547 PFL 549
Score = 53 (23.7 bits), Expect = 4.3e-256, Sum P(3) = 4.3e-256
Identities = 13/58 (22%), Positives = 26/58 (44%)
Query: 76 TYAEVMREQLVRGEEKEVR---KKLQDKAKDGTLKAVPTNGEAKAAPKKRGRWDQTSD 130
T EV E+ + +++E+ ++ K K P + + K+R RWD+ +
Sbjct: 203 TLKEVEEEESISDKKRELELNNTEISQKPKRSRWDQAPPSVTQVSTTKRRSRWDKAPE 260
Score = 52 (23.4 bits), Expect = 2.1e-188, Sum P(4) = 2.1e-188
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 666 RRNRWDETPK--TERETPGHSSGWAETPK 692
+R+RWD+ P T+ T S W + P+
Sbjct: 232 KRSRWDQAPPSVTQVSTTKRRSRWDKAPE 260
Score = 51 (23.0 bits), Expect = 3.8e-191, Sum P(4) = 3.8e-191
Identities = 16/64 (25%), Positives = 35/64 (54%)
Query: 418 LPFLKPEDAQYFDKLLVDVD-EDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQITDK 476
+P ++PE A +F + ++ + + SP+E ++ ++K++ + + T + LR TD
Sbjct: 655 IPLMEPEYASHFTRRIMKILLREFNSPDEEMKKIVLKVVSQCAS-TDGVTPEYLR--TDV 711
Query: 477 AREF 480
EF
Sbjct: 712 LPEF 715
Score = 51 (23.0 bits), Expect = 3.9e-07, Sum P(4) = 3.9e-07
Identities = 30/131 (22%), Positives = 54/131 (41%)
Query: 484 PLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVH-----KILVVIEPLLID 538
P +LP L +P L ++ + ID ++ K+ D YV +I + +L
Sbjct: 912 PPIRDLLPRL-TPILRNRHEKVQENTID-LVGKIADRGSEYVSAREWMRICFELIDMLKA 969
Query: 539 EDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSL 598
R ++KA G +++T+ ++ + R T A A+VA ++
Sbjct: 970 HKKSIRRAAVNTFGYISKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCMPFTV 1029
Query: 599 LPFLKAGGVTP 609
+P L A TP
Sbjct: 1030 VPALMADYRTP 1040
Score = 49 (22.3 bits), Expect = 4.3e-188, Sum P(4) = 4.3e-188
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 656 PSHDKAQSSIRRNRWDETPK 675
PS + ++ RR+RWD+ P+
Sbjct: 241 PSVTQVSTTKRRSRWDKAPE 260
Score = 47 (21.6 bits), Expect = 7.1e-188, Sum P(4) = 7.1e-188
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 712 VSSK-RRSRWDETPQATPSGAMTPSAATPGGMTPSTPITPHV 752
+S K +RSRWD+ P + + T + + I+ HV
Sbjct: 227 ISQKPKRSRWDQAPPSVTQVSTTKRRSRWDKAPENFTISEHV 268
Score = 47 (21.6 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 32/143 (22%), Positives = 62/143 (43%)
Query: 456 LKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQE---RHLLVKVIDR 512
+ ++NG I ++AR++ ++ I PLL + L D++ R VI
Sbjct: 1042 MNVQNGVLKSLAFMFEYIGEQARDY----VY-AITPLL-ADALMDRDAVHRQTAASVIKH 1095
Query: 513 ILYKLDDL-VRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDI 571
+ L V + +L ++ P +++E + RE I + G+ +++ + +
Sbjct: 1096 LSLGCVGLGVEDAMIHLLNILWPNILEESPHVINAVREGIDGIRNCIGVGPIMAYLVQGL 1155
Query: 572 DNIDEYVRNT--TARAFAVVASA 592
+ VRNT T+ A V SA
Sbjct: 1156 FHPSRKVRNTYWTSYNSAYVQSA 1178
Score = 41 (19.5 bits), Expect = 3.0e-187, Sum P(4) = 3.0e-187
Identities = 9/30 (30%), Positives = 11/30 (36%)
Query: 609 PAATRWDETPGHPKPGAETPGATPSTRLWD 638
P +RWD+ P P T WD
Sbjct: 231 PKRSRWDQAP----PSVTQVSTTKRRSRWD 256
Score = 37 (18.1 bits), Expect = 2.1e-254, Sum P(3) = 2.1e-254
Identities = 5/15 (33%), Positives = 12/15 (80%)
Query: 89 EEKEVRKKLQDKAKD 103
+E++ +K++QD+ D
Sbjct: 131 QERQSKKQIQDRESD 145
>CGD|CAL0003514 [details] [associations]
symbol:orf19.2675 species:5476 "Candida albicans" [GO:0071004
"U2-type prespliceosome" evidence=IEA] [GO:0005686 "U2 snRNP"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0000245
"spliceosomal complex assembly" evidence=IEA] InterPro:IPR016024
CGD:CAL0003514 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AACQ01000023 EMBL:AACQ01000025 eggNOG:COG5181
RefSeq:XP_720198.1 RefSeq:XP_720428.1 ProteinModelPortal:Q5AFD2
STRING:Q5AFD2 GeneID:3637842 GeneID:3638121 KEGG:cal:CaO19.10190
KEGG:cal:CaO19.2675 Uniprot:Q5AFD2
Length = 1094
Score = 1233 (439.1 bits), Expect = 7.3e-195, Sum P(3) = 7.3e-195
Identities = 253/472 (53%), Positives = 327/472 (69%)
Query: 903 EIINRVVDDLKDENEQYRKMVMESIEKTMSNLGAADI--DSRLEEQLIDGILYAFQEQTT 960
+++ +V KD+NEQ RK+ +E+I K +SN I DS+L+ +L+DG L+AFQ+QT
Sbjct: 623 DMLEHIVYFTKDDNEQLRKLAIEAINKLISNNSQELIGMDSQLDRKLVDGALFAFQKQTI 682
Query: 961 EDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMKTC 1020
+ L FGT+ + L R+KP+L I TIL+R+ NK A++RQQA+DLI+ IA V+K C
Sbjct: 683 HQKIYLTCFGTLADALNVRLKPHLNSILSTILYRMKNKLAEIRQQASDLIAIIAPVIKQC 742
Query: 1021 QE--EKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGM----TKMTPPIKDLLPR 1074
E ++L+ L ++LYE LGE YPEVLGSIL AL + ++ I T P I +LP
Sbjct: 743 SEHDDELLMKLILILYESLGEVYPEVLGSILNALYSCLDSIDKSTLYTMSNPSINQILPT 802
Query: 1075 LTPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFXXXXXXKAHKKAIRRATVN 1134
LTPILKNRHEKVQE CI LVG IA + E ++A+EWMRICF KA +K IR A N
Sbjct: 803 LTPILKNRHEKVQEACIKLVGLIARKNSETINAKEWMRICFDLLEMLKAQRKRIRIAANN 862
Query: 1135 TFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVP 1194
TFGYIAK IGP DV+ LLNNL+VQERQ RVCT VA+ IVAETC PFTVLPA+MNEYR+P
Sbjct: 863 TFGYIAKTIGPQDVIVMLLNNLRVQERQLRVCTAVAMGIVAETCLPFTVLPAIMNEYRIP 922
Query: 1195 ELNVQNGVLKALSFLFEYI-GEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALG 1253
E NVQNGVLKA+SF+FEY+ G++ KDY++A+TPLLEDAL DRDLVHRQTA I H+A+
Sbjct: 923 EKNVQNGVLKAMSFMFEYLDGKITKDYLFAITPLLEDALTDRDLVHRQTAATVIFHIAMN 982
Query: 1254 VYGF---GCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLF 1310
G D H LN + PNIFETSPH++ +++++ LR+ +G Y+ GLF
Sbjct: 983 CIGLTDKDYSDVFIHYLNLIMPNIFETSPHVISRILESIDALRLVIGNGVFTNYIWSGLF 1042
Query: 1311 HPARKVRDVYWKIYNSLYIGGQDALISAYPRIQN--DMKNV-YLRYELDYVL 1359
HPARKVR YWKI+N+ Y+ DAL+ YPRI++ D + Y ELD L
Sbjct: 1043 HPARKVRAPYWKIFNNAYVQCSDALVPCYPRIESLPDEDEISYKLEELDLFL 1094
Score = 603 (217.3 bits), Expect = 7.3e-195, Sum P(3) = 7.3e-195
Identities = 135/273 (49%), Positives = 171/273 (62%)
Query: 348 RNRPLTDDELEAMFPPGYKVLQPPAGYIPIRTPARKLXXXXXXXXXXXXXFFIQQEDK-- 405
R PLTD LE + PPGY + PPA + + L + +
Sbjct: 159 RGIPLTDSILEKILPPGYVKVNPPAHF---KQNEETLPPDLSDAVVSSNYYLPPTNESVG 215
Query: 406 --TAKYMDNQP--KGNLPFLKPEDAQYFDKLLVDVDEDSLSPEEAKERKIMKLLLKIKNG 461
T + + P KG L F K ED +YF KL V +SL+ EE KE MKL+LKIKNG
Sbjct: 216 ISTTEIPTDVPGVKG-LEFFKEEDMKYFGKL-VHSKPESLNDEEKKELNAMKLVLKIKNG 273
Query: 462 TPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLV 521
+P RK A+RQ+T+ A +FG L NQILP+L+ P L QERHLL+K+I RI+Y+LD+L+
Sbjct: 274 SPVTRKRAMRQLTNNAAKFGPKVLLNQILPILLEPNLTPQERHLLIKMIGRIIYQLDELI 333
Query: 522 RPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNT 581
RPY K+L VI P LIDED R+E REIIS L KAAGLA +IST+RPD+D++DEYVRN
Sbjct: 334 RPYTSKVLTVISPFLIDEDPTVRLETREIISGLTKAAGLANIISTLRPDLDHVDEYVRNL 393
Query: 582 TARAFAVVASALGIPSLLPFLKAGGVTPAATRW 614
TAR FA+VA+ LG+ S LPFLKA V + W
Sbjct: 394 TARIFAIVANTLGLKSFLPFLKA--VIKSKKNW 424
Score = 102 (41.0 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 69/308 (22%), Positives = 138/308 (44%)
Query: 801 RNRPLTDDELEAMFPPGYKVLQPPAACFFIGCSMFAPTVWHLWIYTRSANANFYFGVT-- 858
R PLTD LE + PPGY + PPA F P + + ++N+Y T
Sbjct: 159 RGIPLTDSILEKILPPGYVKVNPPAH-FKQNEETLPPDLSDAVV-----SSNYYLPPTNE 212
Query: 859 -LAFATSQIFLLTDLLFAYLKRDYTLENGIQ---KTIKGKPARLVGASEI-IN--RVVDD 911
+ +T++I TD+ ++ E ++ K + KP L + +N ++V
Sbjct: 213 SVGISTTEI--PTDVP-GVKGLEFFKEEDMKYFGKLVHSKPESLNDEEKKELNAMKLVLK 269
Query: 912 LKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAFQEQTTEDVVMLNGFGT 971
+K+ + RK M + + G + +++ L++ L QE+ +++ G
Sbjct: 270 IKNGSPVTRKRAMRQLTNNAAKFGPKVLLNQILPILLEPNLTP-QERH----LLIKMIGR 324
Query: 972 IVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGV 1031
I+ QL + ++PY ++ I L ++ VR + ++IS + K ++ L
Sbjct: 325 IIYQLDELIRPYTSKVLTVISPFLIDEDPTVRLETREIISGLT---KAAGLANIISTLRP 381
Query: 1032 VLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRH---EKVQE 1088
L +++ +EY L + + A+ + N +G+ P +K ++ + RH + +Q+
Sbjct: 382 DL-DHV-DEYVRNLTARIFAI--VANTLGLKSFLPFLKAVI-KSKKNWTARHTGIKVIQQ 436
Query: 1089 NCIDLVGR 1096
CI ++GR
Sbjct: 437 LCI-MLGR 443
Score = 90 (36.7 bits), Expect = 7.3e-195, Sum P(3) = 7.3e-195
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 75 RTYAEVMREQLVRGEEKEVRKKLQDKAKDGTLKAVPTNGEAKAAPKKRG-RWDQTSD 130
++Y ++M E+ + EE V K +++K DGT K V N + + P+KR RWD T +
Sbjct: 70 KSYKQIMNERNLEREELRVEKLIKEK-DDGTTKTVE-NPQERLLPRKRKKRWDVTPE 124
Score = 74 (31.1 bits), Expect = 3.6e-193, Sum P(3) = 3.6e-193
Identities = 34/124 (27%), Positives = 48/124 (38%)
Query: 209 DFDYQASFNQNKRSGYTAPAALLNDIAQSEKDYDPFADRRQKTVAEKEDEY--RAIRRRM 266
D D Q S+ Q L + EKD D KTV ++ R ++R
Sbjct: 65 DLDEQKSYKQIMNERNLEREELRVEKLIKEKD-----DGTTKTVENPQERLLPRKRKKRW 119
Query: 267 IISPERVDPFAE----GHLAAMTPEQIQAYRWEREIDE-RNRPLTDDELEAMFPPGYKVL 321
++PE E L + + E ++ R PLTD LE + PPGY +
Sbjct: 120 DVTPEEYKKQKECENNKELVKKSTSSLIIELVEGKVPVVRGIPLTDSILEKILPPGYVKV 179
Query: 322 QPPA 325
PPA
Sbjct: 180 NPPA 183
Score = 58 (25.5 bits), Expect = 2.1e-137, Sum P(3) = 2.1e-137
Identities = 22/104 (21%), Positives = 45/104 (43%)
Query: 503 RHLLVKVIDRILYKLD----DLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAA 558
RH +KVI ++ L + PY+ I+ +++P + DE R ++ LA+
Sbjct: 427 RHTGIKVIQQLCIMLGRGNGTAILPYLANIVEILKPPINDESLQVRTITALTLAQLAENV 486
Query: 559 GLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFL 602
I + P ++ I +R + A +G +++P +
Sbjct: 487 S-PYGIDSFEPILEPIWFGIRKHRGKGLASFLKCIG--AMIPLM 527
Score = 53 (23.7 bits), Expect = 7.2e-137, Sum P(3) = 7.2e-137
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 560 LATMISTMRPDIDNIDEYVRNTTARAFAVVA---SALGIPSLLPFLK 603
LA ++ ++P I++ VR TA A +A S GI S P L+
Sbjct: 453 LANIVEILKPPINDESLQVRTITALTLAQLAENVSPYGIDSFEPILE 499
Score = 49 (22.3 bits), Expect = 1.6e-128, Sum P(2) = 1.6e-128
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 705 ETPTPGGVSSKRRSRWDETPQ 725
E P + KR+ RWD TP+
Sbjct: 104 ENPQERLLPRKRKKRWDVTPE 124
Score = 48 (22.0 bits), Expect = 5.7e-133, Sum P(3) = 5.7e-133
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 42 KGNLPFLKPEDAQYFDKLL 60
KG L F K ED +YF KL+
Sbjct: 229 KG-LEFFKEEDMKYFGKLV 246
Score = 40 (19.1 bits), Expect = 1.5e-127, Sum P(2) = 1.5e-127
Identities = 6/10 (60%), Positives = 8/10 (80%)
Query: 666 RRNRWDETPK 675
R+ RWD TP+
Sbjct: 115 RKKRWDVTPE 124
Score = 39 (18.8 bits), Expect = 2.1e-135, Sum P(3) = 2.1e-135
Identities = 23/95 (24%), Positives = 39/95 (41%)
Query: 428 YFDKLLVDVDEDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFN 487
Y +L+ + + SP+E + I+++++ G P RK I D + GP N
Sbjct: 540 YTTELMHIITREFRSPDEDMRKTILRIIM----GLPLSRKL----IPDYEKSI-IGPFVN 590
Query: 488 QILPLLMSPTLED--QERHLLVKVIDRILYKLDDL 520
T D Q L+V+ + + K D L
Sbjct: 591 AFWN---RRTASDSVQITRLVVEATNHLAIKFDFL 622
>SGD|S000004901 [details] [associations]
symbol:HSH155 "U2-snRNP associated splicing factor"
species:4932 "Saccharomyces cerevisiae" [GO:0003729 "mRNA binding"
evidence=IDA] [GO:0000245 "spliceosomal complex assembly"
evidence=ISS;IPI] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005686 "U2 snRNP"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IPI] [GO:0071004 "U2-type prespliceosome" evidence=IDA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] InterPro:IPR016024
SGD:S000004901 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0003729 EMBL:BK006946 EMBL:Z49704
GO:GO:0000245 GO:GO:0005686 GO:GO:0071004 eggNOG:COG5181
HOGENOM:HOG000166737 KO:K12828 OMA:PKEWMRI OrthoDB:EOG4350F5
PIR:S54595 RefSeq:NP_014015.1 ProteinModelPortal:P49955 SMR:P49955
DIP:DIP-2628N IntAct:P49955 MINT:MINT-426520 STRING:P49955
PaxDb:P49955 PeptideAtlas:P49955 EnsemblFungi:YMR288W GeneID:855332
KEGG:sce:YMR288W CYGD:YMR288w GeneTree:ENSGT00390000018393
NextBio:979058 Genevestigator:P49955 GermOnline:YMR288W
Uniprot:P49955
Length = 971
Score = 1263 (449.7 bits), Expect = 3.3e-186, Sum P(3) = 3.3e-186
Identities = 244/464 (52%), Positives = 317/464 (68%)
Query: 896 ARLVGASEIINRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAF 955
A+ +G S I++++ L+DE E +R M + ++ +T++ LG AD+D RLE +LID +L AF
Sbjct: 510 AKKLGCSYTIDKLLTPLRDEAEPFRTMAVHAVTRTVNLLGTADLDERLETRLIDALLIAF 569
Query: 956 QEQTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAV 1015
QEQT D ++ GFG + L R+KP+L I TIL L +K+ VRQ AADL + +
Sbjct: 570 QEQTNSDSIIFKGFGAVTVSLDIRMKPFLAPIVSTILNHLKHKTPLVRQHAADLCAILIP 629
Query: 1016 VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL 1075
V+K C E +++ L ++LYE LGE YPEVLGSI+ A+ I +V+ + K+ PPI +LP L
Sbjct: 630 VIKNCHEFEMLNKLNIILYESLGEVYPEVLGSIINAMYCITSVMDLDKLQPPINQILPTL 689
Query: 1076 TPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFXXXXXXKAHKKAIRRATVNT 1135
TPIL+N+H KV+ N I VG I P Y +EWMRICF K+ K IRR+ T
Sbjct: 690 TPILRNKHRKVEVNTIKFVGLIGKLAPTYAPPKEWMRICFELLELLKSTNKEIRRSANAT 749
Query: 1136 FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE 1195
FG+IA+AIGPHDVL LLNNLKVQERQ RVCT VAI IVA+ C P+ VLP +MNEY PE
Sbjct: 750 FGFIAEAIGPHDVLVALLNNLKVQERQLRVCTAVAIGIVAKVCGPYNVLPVIMNEYTTPE 809
Query: 1196 LNVQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVY 1255
NVQNGVLKA+SF+FEYIG M KDYIY +TPLLEDAL DRDLVHRQTA I H+AL
Sbjct: 810 TNVQNGVLKAMSFMFEYIGNMSKDYIYFITPLLEDALTDRDLVHRQTASNVITHLALNCS 869
Query: 1256 GFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHPARK 1315
G G EDA HL+N + PNIFETSPH + ++ +E L ALGP + Y+ GLFHPA+
Sbjct: 870 GTGHEDAFIHLMNLLIPNIFETSPHAIMRILEGLEALSQALGPGLFMNYIWAGLFHPAKN 929
Query: 1316 VRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYELDYVL 1359
VR +W++YN++Y+ QDA++ YP + D Y+ ELD VL
Sbjct: 930 VRKAFWRVYNNMYVMYQDAMVPFYP-VTPDNNEEYIE-ELDLVL 971
Score = 532 (192.3 bits), Expect = 3.3e-186, Sum P(3) = 3.3e-186
Identities = 105/188 (55%), Positives = 137/188 (72%)
Query: 417 NLPFLKPEDAQYFDKLLVDVDEDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQITDK 476
+L F KP D +YF ++ D L+ +E KER + LLLKIKNG R+ ++R +TDK
Sbjct: 132 DLMFFKPSDHKYFADVISKKPIDELNKDEKKERTLSMLLLKIKNGNTASRRTSMRILTDK 191
Query: 477 AREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLL 536
A FG +FN++LP+L+ +LEDQERHL++K IDR+LY+L DL +PYVHKILVV PLL
Sbjct: 192 AVTFGPEMIFNRLLPILLDRSLEDQERHLMIKTIDRVLYQLGDLTKPYVHKILVVAAPLL 251
Query: 537 IDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIP 596
IDED R G+EII+NL+ AGL T+++ MRPDI+N DEYVRN T+RA AVVA ALG+
Sbjct: 252 IDEDPMVRSTGQEIITNLSTVAGLKTILTVMRPDIENEDEYVRNVTSRAAAVVAKALGVN 311
Query: 597 SLLPFLKA 604
LLPF+ A
Sbjct: 312 QLLPFINA 319
Score = 64 (27.6 bits), Expect = 7.2e-137, Sum P(3) = 7.2e-137
Identities = 33/151 (21%), Positives = 67/151 (44%)
Query: 470 LRQITDKAREFGAGPL-FNQILPLLMSPTLEDQE---RHLLVKVIDRILYKLDDLVRPYV 525
+R +T +A A L NQ+LP + + + RH +K++ +I L V ++
Sbjct: 293 VRNVTSRAAAVVAKALGVNQLLPFINAACHSRKSWKARHTGIKIVQQIGILLGIGVLNHL 352
Query: 526 HKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARA 585
++ I+ L+D+ R+ +S LA+ + I ++ + + +R+ +
Sbjct: 353 TGLMSCIKDCLMDDHVPVRIVTAHTLSTLAENS-YPYGIEVFNVVLEPLWKGIRSHRGKV 411
Query: 586 FAVVASALGIPSLLPFLK---AGGVTPAATR 613
+ A+G S++P + AG T A R
Sbjct: 412 LSSFLKAVG--SMIPLMDPEYAGYYTTEAMR 440
Score = 49 (22.3 bits), Expect = 3.3e-186, Sum P(3) = 3.3e-186
Identities = 23/87 (26%), Positives = 39/87 (44%)
Query: 213 QASFNQNKRSGYTAPAALLNDIAQSEKDYDPFADRRQ-KTVAEKEDEYRAIRRRMIISPE 271
Q S Q+ R AA I ++EKD ++ + +TV +ED Y R M P+
Sbjct: 22 QYSIPQDLRENLQKEAAR---IGENEKDV--LQEKMETRTVQNREDSYHKRRFDMKFEPD 76
Query: 272 ---RVDPFAEGHLAAMTPEQIQAYRWE 295
+ +E A+ P + ++ RW+
Sbjct: 77 SDTQTVTSSENTQDAVVPRKRKS-RWD 102
Score = 48 (22.0 bits), Expect = 3.5e-135, Sum P(3) = 3.5e-135
Identities = 33/144 (22%), Positives = 64/144 (44%)
Query: 418 LPFLKPEDAQYFD-KLLVDVDEDSLSPEEAKERKIMKLLLK---IKNGTPP-MRKAALRQ 472
+P + PE A Y+ + + + + SP++ ++ I+ +L K +++ TP +R+ +
Sbjct: 423 IPLMDPEYAGYYTTEAMRIIRREFDSPDDEMKKTILLVLQKCSAVESITPKFLREEIAPE 482
Query: 473 ITDK--AREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPY----VH 526
K R N+++ + TL ++ ID++L L D P+ VH
Sbjct: 483 FFQKFWVRRVALDRPLNKVVTYT-TVTLA--KKLGCSYTIDKLLTPLRDEAEPFRTMAVH 539
Query: 527 KILVVIEPLLIDEDYYARVEGREI 550
+ + LL D R+E R I
Sbjct: 540 AVTRTVN-LLGTADLDERLETRLI 562
Score = 45 (20.9 bits), Expect = 8.7e-186, Sum P(3) = 8.7e-186
Identities = 22/87 (25%), Positives = 31/87 (35%)
Query: 79 EVMREQLVRGEEKEVRKKLQDKA--KDGTLKAVPT--NGEAKAAPKKR-GRWDQTSDGDV 133
E M + V+ E K+ D D + V + N + P+KR RWD G
Sbjct: 50 EKMETRTVQNREDSYHKRRFDMKFEPDSDTQTVTSSENTQDAVVPRKRKSRWDVK--GYE 107
Query: 134 TPXXXXXXXXXXXXXXDVNIEAQIRDI 160
P VN+E I D+
Sbjct: 108 PPDESSTAVKENSDSALVNVEG-IHDL 133
Score = 43 (20.2 bits), Expect = 1.4e-185, Sum P(3) = 1.4e-185
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 44 NLPFLKPEDAQYFDKLLS 61
+L F KP D +YF ++S
Sbjct: 132 DLMFFKPSDHKYFADVIS 149
Score = 42 (19.8 bits), Expect = 6.1e-131, Sum P(2) = 6.1e-131
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 712 VSSKRRSRWDETPQATPSGAMT 733
V KR+SRWD P + T
Sbjct: 93 VPRKRKSRWDVKGYEPPDESST 114
>RGD|620148 [details] [associations]
symbol:Sf3b1 "splicing factor 3b, subunit 1" species:10116
"Rattus norvegicus" [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005689 "U12-type
spliceosomal complex" evidence=ISO] [GO:0009952 "anterior/posterior
pattern specification" evidence=ISO] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] RGD:620148 HOGENOM:HOG000166737
InterPro:IPR015016 Pfam:PF08920 UniGene:Rn.198843 EMBL:AF260435
IPI:IPI00896772 MINT:MINT-4617391 STRING:Q9ET34 PhosphoSite:Q9ET34
PRIDE:Q9ET34 UCSC:RGD:620148 HOVERGEN:HBG086792 InParanoid:Q9ET34
ArrayExpress:Q9ET34 Genevestigator:Q9ET34 Uniprot:Q9ET34
Length = 496
Score = 458 (166.3 bits), Expect = 2.7e-56, Sum P(2) = 2.7e-56
Identities = 85/135 (62%), Positives = 103/135 (76%)
Query: 316 PGYKVLQPPAGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAGYI 375
P + P GH+ +MTPEQ+QA+RWEREIDERNRPL D+EL+AMFP GYKVL PPAGY+
Sbjct: 363 PAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLFDEELDAMFPEGYKVLPPPAGYV 422
Query: 376 PIRTPARKLXXXXXXXXXXXXXFFIQQEDKTAKYMDNQPKGNLPFLKPEDAQYFDKLLVD 435
PIRTPARKL F +Q ED+T K +++QP GNLPFLKP+D QYFDKLLVD
Sbjct: 423 PIRTPARKLTATPTPLGGMTG-FHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLVD 481
Query: 436 VDEDSLSPEEAKERK 450
VDE +LSPE+ K++K
Sbjct: 482 VDESTLSPEDQKKKK 496
Score = 389 (142.0 bits), Expect = 5.0e-67, Sum P(2) = 5.0e-67
Identities = 88/165 (53%), Positives = 98/165 (59%)
Query: 606 GVTPAATRWDETPGHPKPGAETPGATPSTRLWDXXXXXXXXXXXXXXR------ETPSHD 659
G TP+ RWDETPG K G+ETPGATP +++WD R TP H
Sbjct: 225 GHTPSL-RWDETPGRAK-GSETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHG 282
Query: 660 KAQSSIRRNRWDETPKTERETPGHSSGWAETPKTDRAGPGGDLIQETPTPGGVSSKRRSR 719
A SS R+NRWDETPKTER+TPGH SGWAETP+TDR GGD I ETPTPG +SKR R
Sbjct: 283 GATSSARKNRWDETPKTERDTPGHGSGWAETPRTDR---GGDSIGETPTPG--ASKRNFR 337
Query: 720 WDETPQATPSGAMTPSAATPGGMTPSTPI----TPHVGSTPLMTP 760
WDETP A+ G TP TPG TP TP G MTP
Sbjct: 338 WDETP-ASQMGGSTP-VLTPGKTPIGTPAMNMATPTPGHIMSMTP 380
Score = 389 (142.0 bits), Expect = 5.0e-67, Sum P(2) = 5.0e-67
Identities = 111/239 (46%), Positives = 127/239 (53%)
Query: 613 RWDET----PGH-PKP-----GAETPGATPSTRLWDXXXXXXXXXXXXXXRE-------T 655
RWD+T PG PK AETPG TPS R WD T
Sbjct: 199 RWDQTADQTPGATPKKLSSWDQAETPGHTPSLR-WDETPGRAKGSETPGATPGSKIWDPT 257
Query: 656 PSHDKAQSSIRRNRWDETPKTERETPGH----SSG----WAETPKTDRAGPG-GDLIQET 706
PSH A ++ R D TP TPGH SS W ETPKT+R PG G ET
Sbjct: 258 PSHTPAGAATP-GRGD-TPG--HATPGHGGATSSARKNRWDETPKTERDTPGHGSGWAET 313
Query: 707 PTPGGVSSKRRSRWDETPQATPSGAMTPSAATPGGMTPSTPITPHVGSTPLMTPSGVTPT 766
P R R ++ TP TP A+ TP + GSTP++TP G TP
Sbjct: 314 P--------RTDRGGDSIGETP----TPGASKRNFRWDETPASQMGGSTPVLTP-GKTPI 360
Query: 767 GNKAMAMATPTPGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPA 825
G AM MATPTPGH+ +MTPEQ+QA+RWEREIDERNRPL D+EL+AMFP GYKVL PPA
Sbjct: 361 GTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLFDEELDAMFPEGYKVLPPPA 419
Score = 336 (123.3 bits), Expect = 5.0e-67, Sum P(2) = 5.0e-67
Identities = 89/210 (42%), Positives = 117/210 (55%)
Query: 152 NIEAQIRDIQNRKKDVSEGGGEEKQKRVGLGESGYFDSDIYDGG-GKFEGYVKSIA---- 206
+IEAQIR+IQ +K + E G VGL +GY+D +IY G +F GYV SIA
Sbjct: 10 DIEAQIREIQGKKAALDEAQG------VGLDSTGYYDQEIYGGSDSRFAGYVTSIAATEL 63
Query: 207 -DDDFDYQASFNQ--NKRSGYTAPAALLNDIAQSEKDYDPFADRRQKTVAEKEDEYRAIR 263
DDD DY +S + K+ GY AP ALLNDI QS + YDPFA+ R +A++EDEY+ R
Sbjct: 64 EDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYKKHR 123
Query: 264 RRMIISPERVDPFAEGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQP 323
R MIISPER+DPFA+G TP+ R ++ R + LT +E E K
Sbjct: 124 RTMIISPERLDPFADG---GKTPDPKMNARTYMDV-MREQHLTKEEREIRQQLAEKA--- 176
Query: 324 PAGHL------AAMTPEQIQAYRWEREIDE 347
AG L AA P + RW++ D+
Sbjct: 177 KAGELKVVNGAAASQPPSKRKRRWDQTADQ 206
Score = 228 (85.3 bits), Expect = 2.6e-27, Sum P(2) = 2.6e-27
Identities = 40/55 (72%), Positives = 48/55 (87%)
Query: 279 GHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAGHLAAMTP 333
GH+ +MTPEQ+QA+RWEREIDERNRPL D+EL+AMFP GYKVL PPAG++ TP
Sbjct: 373 GHIMSMTPEQLQAWRWEREIDERNRPLFDEELDAMFPEGYKVLPPPAGYVPIRTP 427
Score = 172 (65.6 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 34/60 (56%), Positives = 41/60 (68%)
Query: 1 YIPIRTPARKLXXXXXXXXXXXXXFFIQQEDKTAKYMDNQPKGNLPFLKPEDAQYFDKLL 60
Y+PIRTPARKL F +Q ED+T K +++QP GNLPFLKP+D QYFDKLL
Sbjct: 421 YVPIRTPARKLTATPTPLGGMTG-FHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLL 479
Score = 164 (62.8 bits), Expect = 2.7e-56, Sum P(2) = 2.7e-56
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 67 GKTPD--VGSRTYAEVMREQLVRGEEKEVRKKLQDKAKDGTLKAVPTNGEAKAAP--KKR 122
GKTPD + +RTY +VMREQ + EE+E+R++L +KAK G LK V NG A + P K++
Sbjct: 140 GKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGELKVV--NGAAASQPPSKRK 197
Query: 123 GRWDQTSD 130
RWDQT+D
Sbjct: 198 RRWDQTAD 205
Score = 123 (48.4 bits), Expect = 8.6e-36, Sum P(2) = 8.6e-36
Identities = 41/93 (44%), Positives = 46/93 (49%)
Query: 664 SIRRNRWDETP-KTERETPGHSSGW--AETP------KTDRAGPGGDLIQETP--TPGGV 712
S R+ RWD+T +T TP S W AETP + D PG ETP TPG
Sbjct: 194 SKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDET-PGRAKGSETPGATPG-- 250
Query: 713 SSKRRSRWDETPQATPSGAMTPSAA-TPGGMTP 744
SK WD TP TP+GA TP TPG TP
Sbjct: 251 -SKI---WDPTPSHTPAGAATPGRGDTPGHATP 279
Score = 85 (35.0 bits), Expect = 8.3e-32, Sum P(2) = 8.3e-32
Identities = 26/77 (33%), Positives = 32/77 (41%)
Query: 714 SKRRSRWDETPQATPSGAMTPSAATPGGMTPSTPITPHV--GSTPLMTPSGVTPTGNKAM 771
SKR+ RWD+T TP GA TP + + TP + TP TP
Sbjct: 194 SKRKRRWDQTADQTP-GA-TPKKLSSWDQAETPGHTPSLRWDETPGRAKGSETPGATPGS 251
Query: 772 AMATPTPGHL--AAMTP 786
+ PTP H A TP
Sbjct: 252 KIWDPTPSHTPAGAATP 268
Score = 64 (27.6 bits), Expect = 1.3e-29, Sum P(2) = 1.3e-29
Identities = 38/160 (23%), Positives = 52/160 (32%)
Query: 608 TPAAT----RWDETPGHPKPGAETPGATPSTRLWDXXXXXXXXXXXXXXRETPSHDKAQS 663
TP A+ RWDETP + G TP TP TP H + +
Sbjct: 328 TPGASKRNFRWDETPAS-QMGGSTPVLTPGK-------TPIGTPAMNMATPTPGHIMSMT 379
Query: 664 SIRRNRWDETPKTERETPGHSSGWAETPKTDRAGPGGDLIQETPTPGGVSSKRRSRWDET 723
+ W + ERE + + + D P G + P P G R T
Sbjct: 380 PEQLQAW----RWEREIDERNRPLFDE-ELDAMFPEGYKV--LPPPAGYVPIRTPARKLT 432
Query: 724 PQATPSGAMTPSAATPGGMTPSTPITPHVGSTPLMTPSGV 763
TP G MT T + G+ P + P +
Sbjct: 433 ATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDI 472
Score = 45 (20.9 bits), Expect = 2.0e-36, Sum P(2) = 2.0e-36
Identities = 9/19 (47%), Positives = 9/19 (47%)
Query: 117 AAPKKRGRWDQTSDGDVTP 135
A PKK WDQ TP
Sbjct: 210 ATPKKLSSWDQAETPGHTP 228
Score = 40 (19.1 bits), Expect = 3.0e-43, Sum P(2) = 3.0e-43
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 99 DKAKDGTLKAVPTNGEAKAAPKKRGRWDQT 128
D+ D ++ PT G A K+ RWD+T
Sbjct: 317 DRGGD-SIGETPTPG----ASKRNFRWDET 341
Score = 40 (19.1 bits), Expect = 4.2e-27, Sum P(2) = 4.2e-27
Identities = 14/34 (41%), Positives = 16/34 (47%)
Query: 600 PFLKAGGVTPAATRWDETP-GHPKPGAETPGATP 632
P + GG TP T +TP G P TP TP
Sbjct: 342 PASQMGGSTPVLTP-GKTPIGTPAMNMATP--TP 372
>FB|FBgn0032052 [details] [associations]
symbol:CG13089 species:7227 "Drosophila melanogaster"
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0006506 "GPI anchor biosynthetic process" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR009600
Pfam:PF06728 GO:GO:0016021 EMBL:AE014134 GO:GO:0005789
GO:GO:0006506 eggNOG:NOG297573 GeneTree:ENSGT00390000014941
KO:K05293 OMA:FFTEMFD PANTHER:PTHR13121 EMBL:AY058668
RefSeq:NP_609238.1 UniGene:Dm.4131 STRING:Q9VLK0
EnsemblMetazoa:FBtr0079682 GeneID:34185 KEGG:dme:Dmel_CG13089
UCSC:CG13089-RA FlyBase:FBgn0032052 InParanoid:Q9VLK0
OrthoDB:EOG480GC7 GenomeRNAi:34185 NextBio:787295 Uniprot:Q9VLK0
Length = 426
Score = 222 (83.2 bits), Expect = 8.2e-15, P = 8.2e-15
Identities = 43/72 (59%), Positives = 54/72 (75%)
Query: 828 FFIGCSMFAPTVWHLWIYTRSANANFYFGVTLAFATSQIFLLTDLLFAYLKRDYTLENGI 887
F + SM +WHLWIY SANANFYFG TLAF+T QIFL+TDLLFA++KR++ L NG
Sbjct: 354 FLVTLSMMG-ALWHLWIYAGSANANFYFGATLAFSTGQIFLITDLLFAHVKREFCLFNGQ 412
Query: 888 QKTIKGKPARLV 899
+ I G+ AR+V
Sbjct: 413 KILIDGEEARIV 424
>UNIPROTKB|Q5JWU1 [details] [associations]
symbol:PIGU "Phosphatidylinositol glycan anchor
biosynthesis class U protein" species:9606 "Homo sapiens"
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0006506 "GPI anchor biosynthetic process" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR009600
Pfam:PF06728 GO:GO:0016021 GO:GO:0051301 GO:GO:0005789
GO:GO:0006506 PANTHER:PTHR13121 EMBL:AL118520 UniGene:Hs.253319
HGNC:HGNC:15791 ChiTaRS:PIGU IPI:IPI00552398 STRING:Q5JWU1
Ensembl:ENST00000438215 Uniprot:Q5JWU1
Length = 170
Score = 186 (70.5 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 827 CFFIGCSMFAPTVWHLWIYTRSANANFYFGVTLAFATSQIFLLTDLLFAYLKRDYTLENG 886
C I CS+ P +WHLWIY SAN+NF++ +TL F QI L++D +A+L+R+Y L +G
Sbjct: 106 CIIIVCSLLFPVLWHLWIYAGSANSNFFYAITLTFNVGQILLISDYFYAFLRREYYLTHG 165
Query: 887 IQKT 890
+ T
Sbjct: 166 LYLT 169
>UNIPROTKB|F1N7F8 [details] [associations]
symbol:PIGU "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046425 "regulation of JAK-STAT cascade" evidence=IEA]
[GO:0042765 "GPI-anchor transamidase complex" evidence=IEA]
[GO:0006506 "GPI anchor biosynthetic process" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] InterPro:IPR009600
Pfam:PF06728 GO:GO:0005886 GO:GO:0006506
GeneTree:ENSGT00390000014941 KO:K05293 OMA:FFTEMFD GO:GO:0042765
PANTHER:PTHR13121 GO:GO:0046425 CTD:128869 EMBL:DAAA02036507
EMBL:DAAA02036508 IPI:IPI00705071 RefSeq:XP_002692488.1
Ensembl:ENSBTAT00000015432 GeneID:535138 KEGG:bta:535138
NextBio:20876638 Uniprot:F1N7F8
Length = 435
Score = 198 (74.8 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 36/75 (48%), Positives = 50/75 (66%)
Query: 826 ACFFIGCSMFAPTVWHLWIYTRSANANFYFGVTLAFATSQIFLLTDLLFAYLKRDYTLEN 885
AC I CS+ P +WHLWIY SAN+NF++ +TL F QI L++D +A+L+R+Y L +
Sbjct: 359 ACIIIICSLLFPVLWHLWIYAGSANSNFFYAITLTFNIGQILLISDYFYAFLRREYYLTH 418
Query: 886 GIQKTIK-GKPARLV 899
G+ T K G A LV
Sbjct: 419 GLYLTAKDGTEAMLV 433
>MGI|MGI:3039607 [details] [associations]
symbol:Pigu "phosphatidylinositol glycan anchor
biosynthesis, class U" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0006506 "GPI anchor biosynthetic process" evidence=ISO]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016255 "attachment of GPI anchor to
protein" evidence=ISO] [GO:0042765 "GPI-anchor transamidase
complex" evidence=ISO] [GO:0046425 "regulation of JAK-STAT cascade"
evidence=ISO] InterPro:IPR009600 Pfam:PF06728 UniPathway:UPA00196
MGI:MGI:3039607 GO:GO:0006506 eggNOG:NOG297573
GeneTree:ENSGT00390000014941 HOGENOM:HOG000189223 GO:GO:0042765
PANTHER:PTHR13121 EMBL:AL929588 HOVERGEN:HBG082139
OrthoDB:EOG4H9XKH EMBL:AL845325 EMBL:BC028278 IPI:IPI00988911
UniGene:Mm.5434 STRING:Q8K358 PhosphoSite:Q8K358 PaxDb:Q8K358
PRIDE:Q8K358 Ensembl:ENSMUST00000165234 InParanoid:Q8K358
Bgee:Q8K358 Genevestigator:Q8K358 GermOnline:ENSMUSG00000038383
Uniprot:Q8K358
Length = 434
Score = 196 (74.1 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 35/74 (47%), Positives = 49/74 (66%)
Query: 827 CFFIGCSMFAPTVWHLWIYTRSANANFYFGVTLAFATSQIFLLTDLLFAYLKRDYTLENG 886
C I CS+ P +WHLWIY SAN+NF++ +TL F QI L++D +A+L+R+Y L +G
Sbjct: 359 CIIIVCSLLFPVLWHLWIYAGSANSNFFYAITLTFNVGQILLISDYFYAFLRREYYLTHG 418
Query: 887 IQKTIK-GKPARLV 899
+ T K G A LV
Sbjct: 419 LYLTAKDGTEAMLV 432
>UNIPROTKB|E2R736 [details] [associations]
symbol:PIGU "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046425 "regulation of JAK-STAT cascade"
evidence=IEA] [GO:0042765 "GPI-anchor transamidase complex"
evidence=IEA] [GO:0006506 "GPI anchor biosynthetic process"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR009600 Pfam:PF06728 GO:GO:0005886 GO:GO:0006506
GeneTree:ENSGT00390000014941 KO:K05293 OMA:FFTEMFD GO:GO:0042765
PANTHER:PTHR13121 GO:GO:0046425 CTD:128869 EMBL:AAEX03013908
EMBL:AAEX03013906 EMBL:AAEX03013907 RefSeq:XP_542970.2
Ensembl:ENSCAFT00000012122 GeneID:485846 KEGG:cfa:485846
NextBio:20859749 Uniprot:E2R736
Length = 435
Score = 196 (74.1 bits), Expect = 6.6e-12, P = 6.6e-12
Identities = 35/74 (47%), Positives = 49/74 (66%)
Query: 827 CFFIGCSMFAPTVWHLWIYTRSANANFYFGVTLAFATSQIFLLTDLLFAYLKRDYTLENG 886
C I CS+ P +WHLWIY SAN+NF++ +TL F QI L++D +A+L+R+Y L +G
Sbjct: 360 CIIIVCSLLFPVLWHLWIYAGSANSNFFYAITLTFNVGQILLISDYFYAFLRREYYLTHG 419
Query: 887 IQKTIK-GKPARLV 899
+ T K G A LV
Sbjct: 420 LYLTAKDGTEAMLV 433
>UNIPROTKB|Q9H490 [details] [associations]
symbol:PIGU "Phosphatidylinositol glycan anchor
biosynthesis class U protein" species:9606 "Homo sapiens"
[GO:0003923 "GPI-anchor transamidase activity" evidence=IMP]
[GO:0016255 "attachment of GPI anchor to protein" evidence=IMP;TAS]
[GO:0030176 "integral to endoplasmic reticulum membrane"
evidence=IC] [GO:0042765 "GPI-anchor transamidase complex"
evidence=IDA] [GO:0034235 "GPI anchor binding" evidence=IMP]
[GO:0006506 "GPI anchor biosynthetic process" evidence=IDA]
[GO:0046425 "regulation of JAK-STAT cascade" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=TAS] [GO:0006501
"C-terminal protein lipidation" evidence=TAS] [GO:0043687
"post-translational protein modification" evidence=TAS] [GO:0044267
"cellular protein metabolic process" evidence=TAS]
Reactome:REACT_17015 InterPro:IPR009600 Pfam:PF06728
UniPathway:UPA00196 GO:GO:0005886 GO:GO:0006501 eggNOG:NOG297573
HOGENOM:HOG000189223 KO:K05293 OMA:FFTEMFD GO:GO:0042765
PANTHER:PTHR13121 GO:GO:0046425 GO:GO:0016255 EMBL:AL118520
CTD:128869 HOVERGEN:HBG082139 EMBL:AB086842 EMBL:AY422169
EMBL:AY339061 EMBL:AY358816 EMBL:AK075507 EMBL:BC030512
IPI:IPI00026044 IPI:IPI00402109 RefSeq:NP_536724.1
UniGene:Hs.253319 ProteinModelPortal:Q9H490 STRING:Q9H490
PhosphoSite:Q9H490 DMDM:29336947 PRIDE:Q9H490 DNASU:128869
Ensembl:ENST00000217446 Ensembl:ENST00000374820 GeneID:128869
KEGG:hsa:128869 UCSC:uc002xas.3 UCSC:uc002xat.3
GeneCards:GC20M033148 HGNC:HGNC:15791 MIM:608528 neXtProt:NX_Q9H490
PharmGKB:PA162399506 InParanoid:Q9H490 OrthoDB:EOG4H9XKH
PhylomeDB:Q9H490 ChiTaRS:PIGU GenomeRNAi:128869 NextBio:82506
ArrayExpress:Q9H490 Bgee:Q9H490 CleanEx:HS_PIGU
Genevestigator:Q9H490 GermOnline:ENSG00000101464 Uniprot:Q9H490
Length = 435
Score = 196 (74.1 bits), Expect = 6.6e-12, P = 6.6e-12
Identities = 35/74 (47%), Positives = 49/74 (66%)
Query: 827 CFFIGCSMFAPTVWHLWIYTRSANANFYFGVTLAFATSQIFLLTDLLFAYLKRDYTLENG 886
C I CS+ P +WHLWIY SAN+NF++ +TL F QI L++D +A+L+R+Y L +G
Sbjct: 360 CIIIVCSLLFPVLWHLWIYAGSANSNFFYAITLTFNVGQILLISDYFYAFLRREYYLTHG 419
Query: 887 IQKTIK-GKPARLV 899
+ T K G A LV
Sbjct: 420 LYLTAKDGTEAMLV 433
>RGD|727825 [details] [associations]
symbol:Pigu "phosphatidylinositol glycan anchor biosynthesis,
class U" species:10116 "Rattus norvegicus" [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006506 "GPI anchor biosynthetic process"
evidence=IEA;ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016255 "attachment of GPI anchor to protein" evidence=ISO]
[GO:0042765 "GPI-anchor transamidase complex" evidence=ISO;ISS]
[GO:0046425 "regulation of JAK-STAT cascade" evidence=ISO]
[GO:0003923 "GPI-anchor transamidase activity" evidence=ISO]
[GO:0034235 "GPI anchor binding" evidence=ISO] InterPro:IPR009600
Pfam:PF06728 UniPathway:UPA00196 RGD:727825 GO:GO:0005886
GO:GO:0006506 eggNOG:NOG297573 HOGENOM:HOG000189223 KO:K05293
GO:GO:0042765 PANTHER:PTHR13121 GO:GO:0046425 CTD:128869
HOVERGEN:HBG082139 OrthoDB:EOG4H9XKH EMBL:AB086841 EMBL:AY383714
IPI:IPI00193080 IPI:IPI00389361 RefSeq:NP_853668.1 UniGene:Rn.40981
STRING:Q8CHJ1 GeneID:353304 KEGG:rno:353304 UCSC:RGD:727825
InParanoid:Q8CHJ1 NextBio:672663 ArrayExpress:Q8CHJ1
Genevestigator:Q8CHJ1 GermOnline:ENSRNOG00000025181 Uniprot:Q8CHJ1
Length = 435
Score = 196 (74.1 bits), Expect = 6.6e-12, P = 6.6e-12
Identities = 35/74 (47%), Positives = 49/74 (66%)
Query: 827 CFFIGCSMFAPTVWHLWIYTRSANANFYFGVTLAFATSQIFLLTDLLFAYLKRDYTLENG 886
C I CS+ P +WHLWIY SAN+NF++ +TL F QI L++D +A+L+R+Y L +G
Sbjct: 360 CIIIVCSLLFPVLWHLWIYAGSANSNFFYAITLTFNVGQILLISDYFYAFLRREYYLTHG 419
Query: 887 IQKTIK-GKPARLV 899
+ T K G A LV
Sbjct: 420 LYLTAKDGTEAMLV 433
>UNIPROTKB|Q8CHJ0 [details] [associations]
symbol:PIGU "Phosphatidylinositol glycan anchor
biosynthesis class U protein" species:10029 "Cricetulus griseus"
[GO:0042765 "GPI-anchor transamidase complex" evidence=ISS]
InterPro:IPR009600 Pfam:PF06728 UniPathway:UPA00196 GO:GO:0006506
GO:GO:0042765 PANTHER:PTHR13121 EMBL:AB086843 RefSeq:NP_001233736.1
GeneID:100689380 CTD:128869 HOVERGEN:HBG082139 Uniprot:Q8CHJ0
Length = 435
Score = 195 (73.7 bits), Expect = 8.4e-12, P = 8.4e-12
Identities = 34/74 (45%), Positives = 49/74 (66%)
Query: 827 CFFIGCSMFAPTVWHLWIYTRSANANFYFGVTLAFATSQIFLLTDLLFAYLKRDYTLENG 886
C + CS+ P +WHLWIY SAN+NF++ +TL F QI L++D +A+L+R+Y L +G
Sbjct: 360 CIIVVCSLLFPVLWHLWIYAGSANSNFFYAITLTFNVGQILLISDYFYAFLRREYYLTHG 419
Query: 887 IQKTIK-GKPARLV 899
+ T K G A LV
Sbjct: 420 LYLTAKDGTEAMLV 433
>UNIPROTKB|E1BST8 [details] [associations]
symbol:PIGU "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0006506
"GPI anchor biosynthetic process" evidence=IEA] [GO:0042765
"GPI-anchor transamidase complex" evidence=IEA] [GO:0046425
"regulation of JAK-STAT cascade" evidence=IEA] InterPro:IPR009600
Pfam:PF06728 GO:GO:0005886 GO:GO:0006506
GeneTree:ENSGT00390000014941 KO:K05293 OMA:FFTEMFD GO:GO:0042765
PANTHER:PTHR13121 GO:GO:0046425 CTD:128869 EMBL:AADN02019540
IPI:IPI00584839 RefSeq:XP_417310.2 Ensembl:ENSGALT00000001850
GeneID:419124 KEGG:gga:419124 NextBio:20822228 Uniprot:E1BST8
Length = 435
Score = 194 (73.4 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 34/75 (45%), Positives = 50/75 (66%)
Query: 826 ACFFIGCSMFAPTVWHLWIYTRSANANFYFGVTLAFATSQIFLLTDLLFAYLKRDYTLEN 885
+C I CS+ P +WHLWI+ SAN+NFY+ +TL F QI L++D +A+L+R+Y L +
Sbjct: 359 SCMLIACSLLFPVLWHLWIFAGSANSNFYYAITLTFNIGQILLISDYFYAFLRREYYLTH 418
Query: 886 GIQKTIK-GKPARLV 899
G+ T + G A LV
Sbjct: 419 GLHLTRQDGTEAMLV 433
>ZFIN|ZDB-GENE-100629-1 [details] [associations]
symbol:pigu "phosphatidylinositol glycan anchor
biosynthesis, class U" species:7955 "Danio rerio" [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0006506 "GPI anchor
biosynthetic process" evidence=IEA] [GO:0003923 "GPI-anchor
transamidase activity" evidence=IMP] [GO:0050976 "detection of
mechanical stimulus involved in sensory perception of touch"
evidence=IMP] [GO:0034394 "protein localization to cell surface"
evidence=IMP] InterPro:IPR009600 Pfam:PF06728
ZFIN:ZDB-GENE-100629-1 GO:GO:0016021 GO:GO:0005789 GO:GO:0006506
GO:GO:0034394 GeneTree:ENSGT00390000014941 OMA:FFTEMFD
PANTHER:PTHR13121 GO:GO:0003923 GO:GO:0050976 EMBL:BX530017
IPI:IPI00506609 Ensembl:ENSDART00000110441 ArrayExpress:F1RES7
Bgee:F1RES7 Uniprot:F1RES7
Length = 435
Score = 186 (70.5 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 34/75 (45%), Positives = 48/75 (64%)
Query: 826 ACFFIGCSMFAPTVWHLWIYTRSANANFYFGVTLAFATSQIFLLTDLLFAYLKRDYTLEN 885
+C + CS P +WHLWIY SAN+NFY+ +TL F QI L++D +AYL+R++ L +
Sbjct: 359 SCVLLACSALFPVLWHLWIYAGSANSNFYYAITLLFNFGQILLVSDYFYAYLRREHHLTH 418
Query: 886 GIQ-KTIKGKPARLV 899
G+ K G A LV
Sbjct: 419 GLYLKKKDGTEATLV 433
>POMBASE|SPAP8A3.09c [details] [associations]
symbol:paa1 "protein phosphatase regulatory subunit
Paa1" species:4896 "Schizosaccharomyces pombe" [GO:0000159 "protein
phosphatase type 2A complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0007094 "mitotic
spindle assembly checkpoint" evidence=ISO] [GO:0007165 "signal
transduction" evidence=NAS] [GO:0019888 "protein phosphatase
regulator activity" evidence=NAS] [GO:0030952 "establishment or
maintenance of cytoskeleton polarity" evidence=IMP] [GO:2000765
"regulation of cytoplasmic translation" evidence=ISO]
InterPro:IPR000357 InterPro:IPR016024 Pfam:PF02985
PomBase:SPAP8A3.09c GO:GO:0005829 GO:GO:0005634 GO:GO:0007165
EMBL:CU329670 GO:GO:0000159 SUPFAM:SSF48371 GO:GO:0006470
eggNOG:NOG247268 HOGENOM:HOG000078539 KO:K03456 Gene3D:1.25.10.10
InterPro:IPR011989 InterPro:IPR021133 PROSITE:PS50077 OMA:HVNTRDT
EMBL:D63916 PIR:T39246 PIR:T44416 RefSeq:NP_594948.1
ProteinModelPortal:Q9UT08 SMR:Q9UT08 STRING:Q9UT08 PRIDE:Q9UT08
EnsemblFungi:SPAP8A3.09c.1 GeneID:2543042 GenomeReviews:CU329670_GR
KEGG:spo:SPAP8A3.09c OrthoDB:EOG454D74 NextBio:20804072
GO:GO:0019888 GO:GO:0030952 GO:GO:0007094 GO:GO:2000765
Uniprot:Q9UT08
Length = 590
Score = 146 (56.5 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 78/338 (23%), Positives = 142/338 (42%)
Query: 912 LKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAFQEQTTEDVV--MLNGF 969
+ D + + R MV + K +G + I L + + +L EQ + + GF
Sbjct: 254 VSDSSWRTRYMVAANFVKLAKVVGPSLIKDELIKPFV--LLMKDTEQEVRRAIATQIPGF 311
Query: 970 GTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHL 1029
+ L KR+ L +I I +N+ + VR A L I + +EK +L
Sbjct: 312 CEL---LDKRI--VLEEIIPVIQELINDPAQHVR---AALGMNIGALAPQLGKEKTTEYL 363
Query: 1030 GVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQEN 1089
+ E L +E PEV +I+ L+ + V+G+ ++ + LLP + + +++ +V+
Sbjct: 364 LPMFLELLKDENPEVRLNIISKLEVVNKVVGIELLS---QSLLPAIVTLAEDKQWRVRLA 420
Query: 1090 CIDLVGRIADR-GPEYVSAREWMRICFXXXXXXKAHKKAIRRATVNTFGYIAKAIGPHDV 1148
ID + +A + G E+ + + +C + H +IR A + + + G
Sbjct: 421 IIDYIPLLAQQLGVEFFNEKMG-NLCMSWL---EDHVYSIREAAIKNLRKLTEIFGLEWA 476
Query: 1149 LATLLNN-LKVQERQN---RVCTTVAIAIVAETCSPFTV----LPALMNEYRVPELNVQN 1200
T++ L ++ N R+ T AI+ +A + + LP L P N++
Sbjct: 477 TETIIPKFLAMRSHPNYLYRMTTIFAISEIAPALNAEVIEKQILPTLEQLVNDPIPNIRF 536
Query: 1201 GVLKALSFLFEYIGEMGKDYIYA--VTPLLEDALMDRD 1236
V KA L + G +Y + PLLE D D
Sbjct: 537 NVAKAFEVLKPVLAAGGDSTVYEQQIIPLLEQLTKDND 574
>ASPGD|ASPL0000015805 [details] [associations]
symbol:AN3826 species:162425 "Emericella nidulans"
[GO:0006506 "GPI anchor biosynthetic process" evidence=IEA]
[GO:0042765 "GPI-anchor transamidase complex" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR009600
Pfam:PF06728 GO:GO:0016021 GO:GO:0005789 EMBL:BN001302
GO:GO:0006506 eggNOG:NOG297573 HOGENOM:HOG000189223 KO:K05293
OMA:FFTEMFD OrthoDB:EOG4NKG48 PANTHER:PTHR13121 EMBL:AACD01000062
RefSeq:XP_661430.1 STRING:Q5B6K4 EnsemblFungi:CADANIAT00004882
GeneID:2873246 KEGG:ani:AN3826.2 Uniprot:Q5B6K4
Length = 407
Score = 133 (51.9 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 25/67 (37%), Positives = 41/67 (61%)
Query: 833 SMFAPTVWHLWIYTRSANANFYFGVTLAFATSQIFLLTDLLFAYLKRDYTLENGIQKTIK 892
S+ P +HLWIY S NANF++ +TL ++ +L D++FA L+ ++ EN ++
Sbjct: 344 SLLGPAFYHLWIYAGSGNANFFYAITLVWSLGFSLILADMIFAALRDEWEQENPDKR--- 400
Query: 893 GKPARLV 899
GKP + V
Sbjct: 401 GKPVKQV 407
>TAIR|locus:2124142 [details] [associations]
symbol:AT4G18670 "AT4G18670" species:3702 "Arabidopsis
thaliana" [GO:0005199 "structural constituent of cell wall"
evidence=ISS] [GO:0009506 "plasmodesma" evidence=IDA]
PROSITE:PS51450 GO:GO:0009506 GO:GO:0005618 GO:GO:0005576
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161549
eggNOG:NOG12793 GO:GO:0005199 InterPro:IPR013210 Pfam:PF08263
EMBL:AL035526 ProtClustDB:CLSN2916045 EMBL:AK228621 IPI:IPI00520564
IPI:IPI00968855 PIR:T04859 RefSeq:NP_193602.4 UniGene:At.46566
UniGene:At.71561 ProteinModelPortal:Q9SN46 SMR:Q9SN46 PaxDb:Q9SN46
PRIDE:Q9SN46 EnsemblPlants:AT4G18670.1 GeneID:827601
KEGG:ath:AT4G18670 TAIR:At4g18670 InParanoid:Q9SN46 OMA:NSVHEEY
Genevestigator:Q9SN46 Uniprot:Q9SN46
Length = 857
Score = 137 (53.3 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 32/77 (41%), Positives = 43/77 (55%)
Query: 706 TPTPGGVSSKRRSRWDETPQATPS-GA--MTPSAATPGGMTPSTPITPHVGSTPLMTPSG 762
TP+PGG S S P TPS G+ +P+ TPGG PS+P TP G +P +P+
Sbjct: 442 TPSPGG-SPPSPSIVPSPPSTTPSPGSPPTSPTTPTPGGSPPSSPTTPTPGGSPPSSPTT 500
Query: 763 VTPTGNKAMAMATPTPG 779
TP G+ + TP+PG
Sbjct: 501 PTPGGSPPSSPTTPSPG 517
>UNIPROTKB|E7EVL4 [details] [associations]
symbol:PIGU "Phosphatidylinositol glycan anchor
biosynthesis class U protein" species:9606 "Homo sapiens"
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0006506 "GPI anchor biosynthetic process" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR009600
Pfam:PF06728 GO:GO:0016021 GO:GO:0005789 GO:GO:0006506
PANTHER:PTHR13121 EMBL:AL118520 HGNC:HGNC:15791 ChiTaRS:PIGU
IPI:IPI00909012 ProteinModelPortal:E7EVL4 Ensembl:ENST00000452740
UCSC:uc010zul.2 ArrayExpress:E7EVL4 Bgee:E7EVL4 Uniprot:E7EVL4
Length = 423
Score = 129 (50.5 bits), Expect = 0.00013, P = 0.00013
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 827 CFFIGCSMFAPTVWHLWIYTRSANANFYFGVTLAFATSQI 866
C I CS+ P +WHLWIY SAN+NF++ +TL F Q+
Sbjct: 360 CIIIVCSLLFPVLWHLWIYAGSANSNFFYAITLTFNVGQM 399
>DICTYBASE|DDB_G0282011 [details] [associations]
symbol:DDB_G0282011 "GPI transamidase subunit PIG-U
family protein" species:44689 "Dictyostelium discoideum"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0006506 "GPI
anchor biosynthetic process" evidence=IEA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR009600 Pfam:PF06728 dictyBase:DDB_G0282011
GO:GO:0016021 GO:GO:0005789 GO:GO:0006506 EMBL:AAFI02000044
eggNOG:NOG297573 KO:K05293 OMA:FFTEMFD PANTHER:PTHR13121
RefSeq:XP_640406.2 EnsemblProtists:DDB0237518 GeneID:8623361
KEGG:ddi:DDB_G0282011 ProtClustDB:CLSZ2848577 Uniprot:Q54T45
Length = 560
Score = 128 (50.1 bits), Expect = 0.00026, P = 0.00026
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 833 SMFAPTVWHLWIYTRSANANFYFGVTLAFATSQIFLLTDLLFAYLKRDY 881
++ AP +W +WIY + NANFY+ + L F +Q+ L+ D L LK DY
Sbjct: 441 TVLAPILWQMWIYQGTGNANFYYTINLVFTIAQVLLIVDSLSVLLKLDY 489
>WB|WBGene00011914 [details] [associations]
symbol:T22C1.3 species:6239 "Caenorhabditis elegans"
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0006506 "GPI anchor biosynthetic process" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR009600 Pfam:PF06728 GO:GO:0016021 GO:GO:0009792
GO:GO:0005789 GO:GO:0006506 eggNOG:NOG297573
GeneTree:ENSGT00390000014941 KO:K05293 PANTHER:PTHR13121
EMBL:Z75550 PIR:T25107 RefSeq:NP_492189.2 STRING:Q22672
PaxDb:Q22672 EnsemblMetazoa:T22C1.3 GeneID:172565
KEGG:cel:CELE_T22C1.3 UCSC:T22C1.3 CTD:172565 WormBase:T22C1.3
HOGENOM:HOG000018530 InParanoid:Q22672 OMA:WSSFTIY NextBio:876067
Uniprot:Q22672
Length = 421
Score = 133 (51.9 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 837 PTVWHLWIYTRSANANFYFGVTLAFATSQIFLLTDLLFAYLKRDYTLE--NGIQKTIK 892
P +WH+WI + S NANF+FG T+ + + I L+ D++F Y +R LE + ++K K
Sbjct: 358 PVMWHMWIVSSSGNANFFFGTTIVYNVALINLVMDMIFVYSRRQIDLEYSDALKKNTK 415
Score = 37 (18.1 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 429 FDKLL--VDVDEDSLSPEEAKERKIMKLLLKI 458
F+KL + + +D L+P EAK L L +
Sbjct: 60 FEKLKDSIAMVDDGLNPFEAKNMHFPPLTLHL 91
>DICTYBASE|DDB_G0290521 [details] [associations]
symbol:DDB_G0290521 species:44689 "Dictyostelium
discoideum" [GO:0005576 "extracellular region" evidence=IEA]
dictyBase:DDB_G0290521 GO:GO:0005576 EMBL:AAFI02000164
RefSeq:XP_635623.1 GeneID:8627695 KEGG:ddi:DDB_G0290521
eggNOG:NOG309689 Uniprot:Q54FZ4
Length = 430
Score = 123 (48.4 bits), Expect = 0.00061, P = 0.00061
Identities = 49/172 (28%), Positives = 77/172 (44%)
Query: 621 PKPGAETPGATPSTRLWDXXXXXXXXXXXXXXRETPSHDKAQSSIRRNRWDETPKTERET 680
P P + +P +PS+ L + +TP+ + Q++ TP T+ +T
Sbjct: 159 PSP-SPSPSPSPSSSLEESQTPSQTPTPT----QTPTPTQTQTTTPTQTQTLTP-TQTQT 212
Query: 681 PGHSSGWAETPKTDRAGPGGDLIQETPTPGGVSSKRRSRWDETPQATPSGAMTPSAATPG 740
P + ++TPK + P +TPTP S+ S +TP TPS TP TP
Sbjct: 213 PSQTPTPSQTPKPTQT-P-----TQTPTPSQTPSQTPS---QTPSQTPSQTPTP---TPS 260
Query: 741 GMTPSTPITPHVGSTPLMTPSGV-TPTGNKAMAMATPTPGHLAAMTPEQIQA 791
TP+ TP T TP+ TP ++ M+++T P + + E IQA
Sbjct: 261 -QTPTPTQTPSQTPTQTQTPTPTQTPISSRPMSISTEKP----SSSEEVIQA 307
>TAIR|locus:2085994 [details] [associations]
symbol:PP2AA2 "protein phosphatase 2A subunit A2"
species:3702 "Arabidopsis thaliana" [GO:0046686 "response to
cadmium ion" evidence=IEP] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0000902 "cell
morphogenesis" evidence=RCA] [GO:0016049 "cell growth"
evidence=RCA] [GO:0048193 "Golgi vesicle transport" evidence=RCA]
[GO:0008601 "protein phosphatase type 2A regulator activity"
evidence=ISS] [GO:0042325 "regulation of phosphorylation"
evidence=ISS] InterPro:IPR000357 InterPro:IPR016024 Pfam:PF02985
GO:GO:0005829 GO:GO:0005886 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0008601 GO:GO:0042325
SUPFAM:SSF48371 HOGENOM:HOG000078539 KO:K03456
ProtClustDB:CLSN2682621 Gene3D:1.25.10.10 InterPro:IPR011989
InterPro:IPR021133 PROSITE:PS50077 OMA:TCLFCIN EMBL:X82002
EMBL:AB028607 EMBL:BT002488 EMBL:BT008356 IPI:IPI00542822
PIR:S51808 RefSeq:NP_189208.1 UniGene:At.159
ProteinModelPortal:Q38950 SMR:Q38950 IntAct:Q38950 STRING:Q38950
PaxDb:Q38950 PRIDE:Q38950 EnsemblPlants:AT3G25800.1 GeneID:822171
KEGG:ath:AT3G25800 GeneFarm:5171 TAIR:At3g25800 eggNOG:COG1413
InParanoid:Q38950 PhylomeDB:Q38950 Genevestigator:Q38950
Uniprot:Q38950
Length = 587
Score = 120 (47.3 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 59/233 (25%), Positives = 109/233 (46%)
Query: 996 NNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAI 1055
++ S VR A +I +A V+ ++ + HL + L +E+P+V +I+ L +
Sbjct: 329 SDSSQHVRSALASVIMGMAPVLG---KDATIEHLLPIFLSLLKDEFPDVRLNIISKLDQV 385
Query: 1056 VNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADR-GPEYVSAREWMRIC 1114
VIG+ ++ + LLP + + ++RH +V+ I+ + +A + G + + +C
Sbjct: 386 NQVIGIDLLS---QSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVGFFDDKLGA-LC 441
Query: 1115 FXXXXXXKAHKKAIRRATVNTFGYIAKAIGP-----HDV--LATLLNNLKVQERQN--RV 1165
K H +IR A N +A+ GP H V + ++NN R R
Sbjct: 442 MQWLQD-KVH--SIRDAAANNLKRLAEEFGPEWAMQHIVPQVLEMVNNPHYLYRMTILRA 498
Query: 1166 CTTVAIAIVAE-TCSPFTVLPALM--NEYRVPELNVQNGVLKALSFLFEYIGE 1215
+ +A + +E TCS +LP +M ++ RVP N++ V K L L + +
Sbjct: 499 VSLLAPVMGSEITCSK--LLPVVMTASKDRVP--NIKFNVAKVLQSLIPIVDQ 547
Score = 54 (24.1 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 32/150 (21%), Positives = 64/150 (42%)
Query: 451 IMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVI 510
I L+ ++KN +R ++R+++ AR G +++P L +D E +L+ +
Sbjct: 11 IAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDDDE--VLLAMA 68
Query: 511 DRILYKLDDLVR-PYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRP 569
+ + + + Y H +L +E L E+ R + + +L + S MR
Sbjct: 69 EELGVFIPYVGGVEYAHVLLPPLETLSTVEETCVR---EKAVESLCRVG------SQMR- 118
Query: 570 DIDNIDEYV----RNTTARAFAVVASALGI 595
+ D +D ++ R F SA G+
Sbjct: 119 ESDLVDHFISLVKRLAAGEWFTARVSACGV 148
>SGD|S000004451 [details] [associations]
symbol:GAB1 "GPI transamidase subunit" species:4932
"Saccharomyces cerevisiae" [GO:0016021 "integral to membrane"
evidence=IEA;ISM] [GO:0006506 "GPI anchor biosynthetic process"
evidence=IEA] [GO:0042765 "GPI-anchor transamidase complex"
evidence=IMP;IPI] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0003923
"GPI-anchor transamidase activity" evidence=IC;ISS] [GO:0016255
"attachment of GPI anchor to protein" evidence=IMP]
InterPro:IPR009600 Pfam:PF06728 UniPathway:UPA00196 SGD:S000004451
GO:GO:0051301 EMBL:BK006945 GO:GO:0007049 GO:GO:0006506 EMBL:L31649
EMBL:U22383 PIR:S48522 RefSeq:NP_013564.1 ProteinModelPortal:P41733
DIP:DIP-4553N IntAct:P41733 MINT:MINT-506885 STRING:P41733
EnsemblFungi:YLR459W GeneID:851181 KEGG:sce:YLR459W CYGD:YLR459w
eggNOG:NOG297573 GeneTree:ENSGT00390000014941 HOGENOM:HOG000189223
KO:K05293 OMA:FFTEMFD OrthoDB:EOG4NKG48 NextBio:968007
Genevestigator:P41733 GermOnline:YLR459W GO:GO:0042765
PANTHER:PTHR13121 Uniprot:P41733
Length = 394
Score = 122 (48.0 bits), Expect = 0.00067, P = 0.00067
Identities = 26/76 (34%), Positives = 45/76 (59%)
Query: 814 FPPGYKVLQPP--AACFFIGCSMFAPTVWHLWIYTRSANANFYFGVTLAFATSQIFLLTD 871
F P + L+ P +A F+ + AP +HLW+ S N+NF++ ++L +A + +L D
Sbjct: 311 FTPLFGYLRYPIISALLFLHAIVLAPIFYHLWVVLGSGNSNFFYAISLVYALAIASILVD 370
Query: 872 LLFAYLKRDYTLENGI 887
L +A L+ +Y +NGI
Sbjct: 371 LNWAMLRIEY--DNGI 384
>SGD|S000000014 [details] [associations]
symbol:TPD3 "Regulatory subunit A of the protein phosphatase
2A (PP2A) complex" species:4932 "Saccharomyces cerevisiae"
[GO:0006417 "regulation of translation" evidence=IMP] [GO:0004722
"protein serine/threonine phosphatase activity" evidence=IMP;IDA]
[GO:0000159 "protein phosphatase type 2A complex" evidence=IDA]
[GO:0005935 "cellular bud neck" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0007117 "budding cell bud growth" evidence=TAS]
[GO:0043332 "mating projection tip" evidence=IDA] [GO:0005934
"cellular bud tip" evidence=IDA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0006470 "protein dephosphorylation" evidence=TAS]
[GO:0007015 "actin filament organization" evidence=TAS] [GO:0007094
"mitotic spindle assembly checkpoint" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000357 InterPro:IPR016024
Pfam:PF02985 SGD:S000000014 GO:GO:0005634 GO:GO:0005737
GO:GO:0006417 GO:GO:0000159 SUPFAM:SSF48371 GO:GO:0005935
GO:GO:0005816 GO:GO:0006470 eggNOG:NOG247268 HOGENOM:HOG000078539
KO:K03456 Gene3D:1.25.10.10 InterPro:IPR011989 InterPro:IPR021133
PROSITE:PS50077 GeneTree:ENSGT00670000097819 OrthoDB:EOG454D74
GO:GO:0007094 EMBL:M98389 EMBL:L05146 EMBL:BK006935 PIR:S36718
RefSeq:NP_009386.1 ProteinModelPortal:P31383 SMR:P31383
DIP:DIP-2010N IntAct:P31383 MINT:MINT-402163 STRING:P31383
PaxDb:P31383 PeptideAtlas:P31383 EnsemblFungi:YAL016W GeneID:851217
KEGG:sce:YAL016W OMA:VENMIRP NextBio:968106 Genevestigator:P31383
GermOnline:YAL016W GO:GO:0005934 GO:GO:0043332 GO:GO:0007015
GO:GO:0007117 Uniprot:P31383
Length = 635
Score = 111 (44.1 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 75/358 (20%), Positives = 160/358 (44%)
Query: 903 EIINRVVDDLKDENEQYRKMVMESIEKTMSNLGA--ADIDSRLEEQLIDGILYAFQEQTT 960
+++N V + DE + R M + S + A ID ++ L + +
Sbjct: 280 DLLNSAVKLIGDEAWRVRYMAADRFSDLASQFSSNQAYIDELVQPFL--NLCEDNEGDVR 337
Query: 961 EDVV-MLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMKT 1019
E V ++GF +N + LP + + ++S VR A I+ I +++
Sbjct: 338 EAVAKQVSGFAKFLNDPSIILNKILPAVQNLSM----DESETVRSALASKITNIVLLLN- 392
Query: 1020 CQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPIL 1079
+++++ + +L L +E+P+V +I+ +LK + +VIG+ ++ LLP +T +
Sbjct: 393 --KDQVINNFLPILLNMLRDEFPDVRLNIIASLKVVNDVIGIELLSD---SLLPAITELA 447
Query: 1080 KNRHEKVQENCIDLVGRIADR-GPEYVSAREWMRICFXXXXXXKAHKKAIRRATVNTFGY 1138
K+ + +V+ I+ + +A++ G ++ ++ +C +IR A VN
Sbjct: 448 KDVNWRVRMAIIEYIPILAEQLGMQFFD-QQLSDLCLSWLWDTVY---SIREAAVNNLKR 503
Query: 1139 IAKAIGPH----DVLATLLN-NLKVQER-QNR-----VCTT----VAIAIVAETCSPFTV 1183
+ + G ++++ LL +L++ E +R TT V++ +V E PF
Sbjct: 504 LTEIFGSDWCRDEIISRLLKFDLQLLENFVSRFTILSALTTLVPVVSLDVVTEQLLPF-- 561
Query: 1184 LPALMNEYRVPELNVQNGVLKALSFLFEYI--GEMGKDYIY--AVTPLLEDALMDRDL 1237
+ L ++ VP N++ V K+ + + + + E D + + P L+ D D+
Sbjct: 562 ISHLADD-GVP--NIRFNVAKSYAVIVKVLIKDEAKYDALIKNTILPSLQTLCQDEDV 616
Score = 64 (27.6 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 30/143 (20%), Positives = 65/143 (45%)
Query: 454 LLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRI 513
L+ ++K+ R A++++ A G N+++P L + +D E + + +++
Sbjct: 42 LMDELKHDDIANRVEAMKKLDTIALALGPERTRNELIPFL-TEVAQDDEDEVFAVLAEQL 100
Query: 514 LYKLDDLVRP-YVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDID 572
+ + P Y +L V+E L E+ R + + ++N+A+ + S P I+
Sbjct: 101 GKFVPYIGGPQYATILLPVLEILASAEETLVREKAVDSLNNVAQELSQEQLFSDFVPLIE 160
Query: 573 NIDEYVRNTTARAFAVVASALGI 595
++ TA F+ SA G+
Sbjct: 161 HL------ATADWFSSKVSACGL 177
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.136 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1359 1299 0.00083 124 3 11 22 0.41 34
39 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 37
No. of states in DFA: 624 (66 KB)
Total size of DFA: 555 KB (2249 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 132.76u 0.14s 132.90t Elapsed: 00:00:39
Total cpu time: 132.80u 0.14s 132.94t Elapsed: 00:00:41
Start: Thu Aug 15 15:28:15 2013 End: Thu Aug 15 15:28:56 2013