RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy10461
(1359 letters)
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId:
9606]}
Length = 876
Score = 128 bits (321), Expect = 2e-30
Identities = 46/304 (15%), Positives = 100/304 (32%), Gaps = 39/304 (12%)
Query: 904 IINRVVDDLKDENEQYRKMVM--ESIEKTMSNLGAADIDSRLEEQLIDGILYAFQEQTTE 961
+ + D + + +++ + + D + + ++ +L FQ
Sbjct: 563 QMESHIQSTSDRIQFNDLQSLLCATLQNVLRKVQHQDALQ-ISDVVMASLLRMFQSTAGS 621
Query: 962 DVV---MLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSA-KVRQQAADLISRIAVVM 1017
V L T+V LG Y+ + L N + +V A L+ + +
Sbjct: 622 GGVQEDALMAVSTLVEVLGGEFLKYMEAFKPFLGIGLKNYAEYQVCLAAVGLVGDLCRAL 681
Query: 1018 KTCQEEKLMGHLGVVLYEYLGEE--YPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL 1075
+ + +L E LG E + V IL I IG + ++ +L L
Sbjct: 682 Q-SNIIPFCDEVMQLLLENLGNENVHRSVKPQILSVFGDIALAIG-GEFKKYLEVVLNTL 739
Query: 1076 TPILKNRHEK-----------VQENCIDLVGRI--ADRGPEYVSAREWMRIC------FE 1116
+ + +K ++E+C++ I +G + + M +
Sbjct: 740 QQASQAQVDKSDYDMVDYLNELRESCLEAYTGIVQGLKGDQENVHPDVMLVQPRVEFILS 799
Query: 1117 LLELL---KAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQE-----RQNRVCTT 1168
++ + + H + G + A G DVL + + E R+++
Sbjct: 800 FIDHIAGDEDHTDGVVACAAGLIGDLCTAFGK-DVLKLVEARPMIHELLTEGRRSKTNKA 858
Query: 1169 VAIA 1172
+A
Sbjct: 859 KTLA 862
Score = 44.0 bits (102), Expect = 1e-04
Identities = 33/316 (10%), Positives = 83/316 (26%), Gaps = 71/316 (22%)
Query: 950 GILYAFQEQTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADL 1009
+ E E + + + I +L + +
Sbjct: 472 WAFSSLAEAAYEAADVADD---QEEPATYCLSSSFELIVQKLLETTDRPDGHQNNLRSSA 528
Query: 1010 ISRIAVVMKTCQEE-----------------KLMGHLGVVLYEYLGEEYPEVLGSILGAL 1052
+ ++K ++ +++ + ++ ++ + L
Sbjct: 529 YESLMEIVKNSAKDCYPAVQKTTLVIMERLQQVLQMESHIQSTSDRIQFNDLQSLLCATL 588
Query: 1053 KAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEK--VQENCIDLVGRIAD----RGPEYVS 1106
+ ++ + ++ L + ++ VQE+ + V + + +Y+
Sbjct: 589 QNVLRKVQHQDALQISDVVMASLLRMFQSTAGSGGVQEDALMAVSTLVEVLGGEFLKYME 648
Query: 1107 AREWMRICFELLELLKAHK-KAIRRATVNTFGYIAKAIGPH------DVLATLLNNLKVQ 1159
L LK + + A V G + +A+ + +V+ LL NL +
Sbjct: 649 -----AFKPFLGIGLKNYAEYQVCLAAVGLVGDLCRALQSNIIPFCDEVMQLLLENLGNE 703
Query: 1160 ERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKALSFLFEYIGEMGKD 1219
V +L + IG K
Sbjct: 704 NVHRSVK---------------------------------PQILSVFGDIALAIGGEFKK 730
Query: 1220 YIYAVTPLLEDALMDR 1235
Y+ V L+ A +
Sbjct: 731 YLEVVLNTLQQASQAQ 746
Score = 32.8 bits (73), Expect = 0.33
Identities = 22/153 (14%), Positives = 45/153 (29%), Gaps = 18/153 (11%)
Query: 1116 ELLELLKAHKKAIRRATVNTFGYIAKAIGPH----DVLATLLNNLKVQERQNRVCTTVAI 1171
+L L + + IA A P +++ L+ N+ + +
Sbjct: 94 YVLHTLG-TETYRPSSASQCVAGIACAEIPVNQWPELIPQLVANVTNPNSTEHMKESTLE 152
Query: 1172 AI--VAETCSP-------FTVLPALMNEYRVPELNVQN--GVLKALSFLFEYIGEMGKDY 1220
AI + + P +L A++ R E + AL E+
Sbjct: 153 AIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKE 212
Query: 1221 IY--AVTPLLEDALMDRDLVHRQTACATIKHMA 1251
+ ++ +A D R A + +
Sbjct: 213 SERHFIMQVVCEATQCPDTRVRVAALQNLVKIM 245
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein
phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId:
9606]}
Length = 588
Score = 108 bits (270), Expect = 7e-25
Identities = 56/361 (15%), Positives = 129/361 (35%), Gaps = 20/361 (5%)
Query: 901 ASEIINRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAFQEQTT 960
+ ++ + +D++ + R MV + + +G + L + + E
Sbjct: 240 EALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRA 299
Query: 961 EDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMKTC 1020
+ F ++ R + QI I +++ + V+ A +I ++ ++
Sbjct: 300 AASHKVKEFCENLSAD-CRENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKD 358
Query: 1021 QEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILK 1080
+ + L + + E L + + V + + + LLP + + +
Sbjct: 359 NTIEHLLPLFLAQLKDECPEVR------LNIISNLDCVNEVIGIRQLSQSLLPAIVELAE 412
Query: 1081 NRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIA 1140
+ +V+ I+ + +A + + +C L H AIR A + +
Sbjct: 413 DAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLV---DHVYAIREAATSNLKKLV 469
Query: 1141 KAIGPHDVLATLLNNLKVQERQN----RVCTTVAIAIVAETCSP----FTVLPALMNEYR 1192
+ G AT++ + R+ T I +++E C +LP ++
Sbjct: 470 EKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAG 529
Query: 1193 VPELNVQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMAL 1252
P NV+ V K+L + + V P+LE D+D+ + A + ++L
Sbjct: 530 DPVANVRFNVAKSLQKIGPILDN--STLQSEVKPILEKLTQDQDVDVKYFAQEALTVLSL 587
Query: 1253 G 1253
Sbjct: 588 A 588
Score = 62.1 bits (149), Expect = 3e-10
Identities = 57/434 (13%), Positives = 140/434 (32%), Gaps = 30/434 (6%)
Query: 905 INRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAFQEQTTEDVV 964
I ++D+L++E+ Q R ++ + LG R +L+ + ++ +
Sbjct: 12 IAVLIDELRNEDVQLRLNSIKKLSTIALALG----VERTRSELLPFLTDTIYDEDEVLLA 67
Query: 965 MLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMKTCQEEK 1024
+ GT +G Y+ + + + VR +A + + I+
Sbjct: 68 LAEQLGTFTTLVGG--PEYVHCLLPPLESLATVEETVVRDKAVESLRAIS---HEHSPSD 122
Query: 1025 LMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIK-DLLPRLTPILKNRH 1083
L H ++ G ++ S G +++ +K +L + +
Sbjct: 123 LEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYP-----RVSSAVKAELRQYFRNLCSDDT 177
Query: 1084 EKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAI 1143
V+ +G A I L + ++R V IA+ +
Sbjct: 178 PMVRRAAASKLGEFAKVLEL---DNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLL 234
Query: 1144 GPHDVLATLLNN-LKVQERQNRVCTTVAIAIVAETCSPFTV-------LPALMNEYRVPE 1195
D+ A ++ + E ++ + E +PA N + E
Sbjct: 235 PQEDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCE 294
Query: 1196 LNVQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVY 1255
V+ + E + ++ + ++ +L ++ A +
Sbjct: 295 AEVRAAASHKVKEFCENLSADCRENVI-MSQILPCIKELVSDANQHVKSALASVIMGLSP 353
Query: 1256 GFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHPARK 1315
G ++ + HLL + + P + + ++ + +G ++ Q +L + A
Sbjct: 354 ILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELA-- 411
Query: 1316 VRDVYWKIYNSLYI 1329
D W++ ++
Sbjct: 412 -EDAKWRVRLAIIE 424
Score = 56.0 bits (133), Expect = 3e-08
Identities = 34/172 (19%), Positives = 70/172 (40%), Gaps = 15/172 (8%)
Query: 437 DEDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSP 496
+DSL P I L+ +++N +R ++++++ A G +++LP L
Sbjct: 5 GDDSLYP-------IAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTD- 56
Query: 497 TLEDQERHLLVKVIDRILYKLDDLV--RPYVHKILVVIEPLLIDEDYYARVEGREIISNL 554
T+ D++ LL + L LV YVH +L +E L E+ R + E + +
Sbjct: 57 TIYDEDEVLLA--LAEQLGTFTTLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRAI 114
Query: 555 AKAAGLATMISTMRPDIDNIDE---YVRNTTARAFAVVASALGIPSLLPFLK 603
+ + + + P + + + T+A V ++ L+
Sbjct: 115 SHEHSPSDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSAVKAELR 166
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein
1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}
Length = 1207
Score = 85.6 bits (210), Expect = 3e-17
Identities = 28/189 (14%), Positives = 80/189 (42%), Gaps = 17/189 (8%)
Query: 432 LLVDVDEDSLSPEEAKERKIMKLLLK-IKNGTPPMRKAALR---QITDKAREFGAGPLFN 487
L+ ++ +DS+ ++ ERK++K++LK +++ ++ A++ + K +E+ + +
Sbjct: 27 LMTELQKDSIKLDDDSERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKVKEYQVETIVD 86
Query: 488 QILPLLMSPTLEDQER-HLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLID-----EDY 541
+ ++S + ++ + +K + L + I L ED
Sbjct: 87 TLCTNMLSDKEQLRDISSIGLKTVIGEL-PPASSGSALAANVCKKITGRLTSAIAKQEDV 145
Query: 542 YARVEGREIISNLAKAAG------LATMISTMRPDIDNIDEYVRNTTARAFAVVASALGI 595
++E +I++++ G ++++ + P + + VR T A + + G
Sbjct: 146 SVQLEALDIMADMLSRQGGLLVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGN 205
Query: 596 PSLLPFLKA 604
+ ++
Sbjct: 206 IVFVDLIEH 214
Score = 80.2 bits (196), Expect = 1e-15
Identities = 54/445 (12%), Positives = 131/445 (29%), Gaps = 65/445 (14%)
Query: 901 ASEIINRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAFQEQTT 960
AS I+ +++ + ++ +R M + + + +D E +++ IL
Sbjct: 1 ASYHISNLLEKMTSSDKDFRFMATNDLMTELQKD-SIKLDDDSERKVVKMILKL------ 53
Query: 961 EDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMKTC 1020
L +K+ +V+ A + + +K
Sbjct: 54 ----------------------------------LEDKNGEVQNLAVKCLGPLVSKVKEY 79
Query: 1021 QEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVI-----GMTKMTPPIKDLLPRL 1075
Q E ++ L + + ++ LK ++ + G K + RL
Sbjct: 80 QVETIVDT----LCTNMLSDKEQLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRL 135
Query: 1076 TPILKNR-HEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKAHKKAIRRATVN 1134
T + + VQ +D++ + R + I LL L + + A+R+ T+
Sbjct: 136 TSAIAKQEDVSVQLEALDIMADMLSRQGGLLVNFH-PSILTCLLPQLTSPRLAVRKRTII 194
Query: 1135 TFGYIAKAIGPH---DVLATLLNNLKV-QERQNRVCTTVAIAIVAETCSPF------TVL 1184
G++ + G D++ LL+ L IA ++ ++
Sbjct: 195 ALGHLVMSCGNIVFVDLIEHLLSELSKNDSMSTTRTYIQCIAAISRQAGHRIGEYLEKII 254
Query: 1185 PALMNEYRVPELNVQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAC 1244
P ++ V + ++ ++A + ++ + + L +
Sbjct: 255 PLVVKFCNVDDDELREYCIQAFESFVRRCPKEVYPHVSTIINICLKYLTYDPNYNYDDED 314
Query: 1245 ATIKHMALGVYGFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPV--RIL 1302
M + + ++ + V L +
Sbjct: 315 EDENAMDADGGDD-DDQGSDDEYSDDDDMSWKVRRAAAKCLDAVVSTRHEMLPEFYKTVS 373
Query: 1303 QYVLQGLFHPARKVRDVYWKIYNSL 1327
++ V+ + Y SL
Sbjct: 374 PALISRFKEREENVKADVFHAYLSL 398
Score = 77.5 bits (189), Expect = 8e-15
Identities = 58/453 (12%), Positives = 130/453 (28%), Gaps = 19/453 (4%)
Query: 901 ASEIINRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAFQEQTT 960
I++ + ++ + EQ R + ++ + L A S L + I
Sbjct: 81 VETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAIA 140
Query: 961 ED------VVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIA 1014
+ + L+ ++++ G + + P I +L +L + VR++ + +
Sbjct: 141 KQEDVSVQLEALDIMADMLSRQGGLLVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHLV 200
Query: 1015 VVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPR 1074
+ L+ HL L E + + + + AI G ++ ++ ++P
Sbjct: 201 MSCGNIVFVDLIEHL---LSELSKNDSMSTTRTYIQCIAAISRQAGH-RIGEYLEKIIPL 256
Query: 1075 LTPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKAHKKAIRRATVN 1134
+ ++++E CI R P+ V I L+ L
Sbjct: 257 VVKFCNVDDDELREYCIQAFESFVRRCPKEVYPHVS-TIINICLKYLTYDPNYNYDDEDE 315
Query: 1135 TFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPF--------TVLPA 1186
+ G D + + +V A + A + TV PA
Sbjct: 316 DENAMDADGGDDDDQGSDDEYSDDDDMSWKVRRAAAKCLDAVVSTRHEMLPEFYKTVSPA 375
Query: 1187 LMNEYRVPELNVQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACAT 1246
L++ ++ E NV+ V A L + + + +
Sbjct: 376 LISRFKEREENVKADVFHAYLSLLKQTRPVQSWLCDPDAMEQGETPLTMLQSQVPNIVKA 435
Query: 1247 IKHMALGVYGFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVL 1306
+ + L V + H+ + L + L
Sbjct: 436 LHKQMKEKSVKTRQCCFNMLTELVNVLPGALTQHIPVLVPGIIFSLNDKSSSSNLKIDAL 495
Query: 1307 QGLFHPARKVRDVYWKIYNSLYIGGQDALISAY 1339
L+ + + + A +
Sbjct: 496 SCLYVILCNHSPQVFHPHVQALVPPVVACVGDP 528
Score = 67.1 bits (162), Expect = 1e-11
Identities = 52/352 (14%), Positives = 113/352 (32%), Gaps = 49/352 (13%)
Query: 899 VGASEIINRVVDDLKDENEQY-RKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAFQE 957
+G +++ + + ++ K SI K ++ L A ++ + +
Sbjct: 767 LGYMDLLRMLTGPVYSQSTALTHKQSYYSIAKCVAALTRACPKEG--PAVVGQFIQDVKN 824
Query: 958 QTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVM 1017
+ D + L ++ ++ IL ++ S +V+ A+ + I+V
Sbjct: 825 SRSTDSIRLLALLSLGEVGHHIDLSGQLELKSVILEAFSSPSEEVKSAASYALGSISVGN 884
Query: 1018 KTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTP 1077
L +L VL E P+ +L +LK I++ + + P ++++ L
Sbjct: 885 -------LPEYLPFVLQEI--TSQPKRQYLLLHSLKEIISSASVVGLKPYVENIWALLLK 935
Query: 1078 ILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKAHKKAIRRATVNTFG 1137
+ E + + +G++ PE + L L + R + V
Sbjct: 936 HCECAEEGTRNVVAECLGKLTLIDPE--------TLLPRLKGYLISGSSYARSSVVTAVK 987
Query: 1138 YIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELN 1197
+ + LL N + + P+LN
Sbjct: 988 FTISDHP--QPIDPLLKNC---------------------------IGDFLKTLEDPDLN 1018
Query: 1198 VQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKH 1249
V+ L + + +D + V P L + R + R+ KH
Sbjct: 1019 VRRVALVTFNSAAHNKPSLIRDLLDTVLPHLYNETKVRKELIREVEMGPFKH 1070
Score = 57.4 bits (137), Expect = 1e-08
Identities = 51/525 (9%), Positives = 148/525 (28%), Gaps = 42/525 (8%)
Query: 788 QIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAACFFIGCSMFAPTVWHLWIYTR 847
+A +++ + RPL P + + + V I
Sbjct: 533 TSEALLVTQQLVKVIRPLDQPSSFDATPYIKDLF--TCTIKRLKAADIDQEVKERAISCM 590
Query: 848 SANANFYFGVTLAFATSQIFLLTDLLFAYLKRDYTLENGIQKTIKGKPARLV-GASEIIN 906
+ + + + + L + R T++ L E +
Sbjct: 591 GQIICNLGDNLGSDLPNTLQIFLERLKNEITRLTTVKALTLIAGSPLKIDLRPVLGEGVP 650
Query: 907 RVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAFQEQTTEDVVML 966
+ L+ + + +++ + N + + ++ L + + + +
Sbjct: 651 ILASFLRKNQRALKLGTLSALDILIKNYSDSLTAAMIDAVLDELPPLISESDMHVSQMAI 710
Query: 967 NGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMKTCQEEKLM 1026
+ T+ + I L L + ++ ++ T
Sbjct: 711 SFLTTLAKVYPSSLSKISGSIL-NELIGLVRSPLLQGGALSAMLDFFQALVVTGTNNLGY 769
Query: 1027 GHLGVVLYE--------YLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPI 1078
L +L ++ + + AL G + I+D+
Sbjct: 770 MDLLRMLTGPVYSQSTALTHKQSYYSIAKCVAALTRACPKEGPAVVGQFIQDVKNS---- 825
Query: 1079 LKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGY 1138
+ ++ + +G + ++ + + +LE + + ++ A G
Sbjct: 826 --RSTDSIRLLALLSLGEVG----HHIDLSGQLELKSVILEAFSSPSEEVKSAASYALGS 879
Query: 1139 IAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPF-------TVLPALMNEY 1191
I+ + L +L + Q ++ + ++ + + S + L+
Sbjct: 880 IS-VGNLPEYLPFVLQEITSQPKR-QYLLLHSLKEIISSASVVGLKPYVENIWALLLKHC 937
Query: 1192 RVPELNVQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMA 1251
E +N V + L G++ + P L+ L+ R + +K
Sbjct: 938 ECAEEGTRNVVAECL-------GKLTLIDPETLLPRLKGYLISGSSYARSSVVTAVKFT- 989
Query: 1252 LGVYGFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVAL 1296
+ + + L + + + + ++ + A+ A
Sbjct: 990 ISDHPQPIDPLLKNCIGDFLKTLEDPDLNVRRV---ALVTFNSAA 1031
Score = 37.0 bits (84), Expect = 0.021
Identities = 21/142 (14%), Positives = 51/142 (35%), Gaps = 10/142 (7%)
Query: 869 LTDLLFAYLKRDYTLENGIQKTIKGKPARL--VGASEIINRVVDDLKDENEQYRKMVMES 926
+ LL + + E G + + +L + ++ R+ L + R V+ +
Sbjct: 929 IWALLLKHCECA---EEGTRNVVAECLGKLTLIDPETLLPRLKGYLISGSSYARSSVVTA 985
Query: 927 IEKTMSNLGAADIDSRLEEQLIDGILYAFQEQTTEDVVM--LNGFGTIVNQLGKRVKPYL 984
++ T+S+ ID L+ I L ++ +V L F + + ++ L
Sbjct: 986 VKFTISDHPQ-PIDPLLK-NCIGDFLKTLED-PDLNVRRVALVTFNSAAHNKPSLIRDLL 1042
Query: 985 PQICGTILWRLNNKSAKVRQQA 1006
+ + + +R+
Sbjct: 1043 DTVLPHLYNETKVRKELIREVE 1064
Score = 31.6 bits (70), Expect = 0.79
Identities = 15/83 (18%), Positives = 34/83 (40%), Gaps = 15/83 (18%)
Query: 449 RKIMKLLLK-IKNGTPPMRKAALRQITDKAREFGAG--PLFNQILPLLMSPTLEDQERHL 505
+ + LK +++ +R+ AL A + L + +LP L + T +E
Sbjct: 1002 KNCIGDFLKTLEDPDLNVRRVALVTFNSAAHNKPSLIRDLLDTVLPHLYNETKVRKE--- 1058
Query: 506 LVKVIDRILYKLDDLVRPYVHKI 528
L++ ++ + P+ H +
Sbjct: 1059 LIREVE---------MGPFKHTV 1072
Score = 30.5 bits (67), Expect = 2.1
Identities = 16/92 (17%), Positives = 28/92 (30%), Gaps = 4/92 (4%)
Query: 450 KIMKLLLK-IKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVK 508
I LLLK + R + K L ++ L+S + R +V
Sbjct: 928 NIWALLLKHCECAEEGTRNVVAECLG-KLTLIDPETLLPRLKGYLISGSSY--ARSSVVT 984
Query: 509 VIDRILYKLDDLVRPYVHKILVVIEPLLIDED 540
+ + + P + + L D D
Sbjct: 985 AVKFTISDHPQPIDPLLKNCIGDFLKTLEDPD 1016
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 888
Score = 77.8 bits (190), Expect = 5e-15
Identities = 28/200 (14%), Positives = 59/200 (29%), Gaps = 46/200 (23%)
Query: 910 DDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAFQEQTTEDVVMLNG- 968
D + ++ + + ++ + LG ++ + Q++ E
Sbjct: 629 DQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFAL 688
Query: 969 FGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGH 1028
G + + VKP +
Sbjct: 689 LGDLTKACFQHVKPCIADFM---------------------------------------- 708
Query: 1029 LGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKN--RHEKV 1086
+L L E+ V + A+ I +G +M P I +L +L I+ + +
Sbjct: 709 --PILGTNLNPEFISVCNNATWAIGEISIQMG-IEMQPYIPMVLHQLVEIINRPNTPKTL 765
Query: 1087 QENCIDLVGRIADRGPEYVS 1106
EN +GR+ P+ V+
Sbjct: 766 LENTAITIGRLGYVCPQEVA 785
Score = 42.0 bits (97), Expect = 5e-04
Identities = 23/144 (15%), Positives = 45/144 (31%), Gaps = 10/144 (6%)
Query: 982 PYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEY 1041
I L + + S +R LI+ IA + L+ L L E
Sbjct: 84 GVTDFIKSECLNNIGDSSPLIRATVGILITTIASKGELQNWPDLLP----KLCSLLDSED 139
Query: 1042 PEVLGSILGALKAIV----NVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRI 1097
GAL+ I ++ + P+ ++P+ K+ K++ + + V +
Sbjct: 140 YNTCEGAFGALQKICEDSAEILDSDVLDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQF 199
Query: 1098 ADRGPEYVSAREW--MRICFELLE 1119
+ + F L
Sbjct: 200 IISRTQALMLHIDSFTENLFALAG 223
Score = 40.1 bits (92), Expect = 0.002
Identities = 25/191 (13%), Positives = 51/191 (26%), Gaps = 16/191 (8%)
Query: 1113 ICFELLELLKAHKKAIRRATV----NTFGYIAKAIGPHD---VLATLLNNLKVQERQNRV 1165
+L LK+ + R + N + + + LNN+ R
Sbjct: 47 YLIFVLTKLKSEDEPTRSLSGLILKNNVKAHFQNFPNGVTDFIKSECLNNIGDSSPLIRA 106
Query: 1166 CTTVAIAIVAETCSPF---TVLPALMNEYRVPELNVQNGVLKALSFLFEYIG-----EMG 1217
+ I +A +LP L + + N G AL + E ++
Sbjct: 107 TVGILITTIASKGELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVL 166
Query: 1218 KDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVYGFGCEDALTHLLNYVWPNIFET 1277
+ + P R A A + + + ++ +
Sbjct: 167 DRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQA-LMLHIDSFTENLFALAGDE 225
Query: 1278 SPHLVQAFMDA 1288
P + + A
Sbjct: 226 EPEVRKNVCRA 236
Score = 35.8 bits (81), Expect = 0.038
Identities = 23/154 (14%), Positives = 55/154 (35%), Gaps = 16/154 (10%)
Query: 443 PEEAKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILP-LLMSPTLEDQ 501
P+E ++I++LL + ++ +++ +++ + P FN L +L ED+
Sbjct: 5 PDEQGLQQILQLLKESQSPDTTIQRTVQQKL----EQLNQYPDFNNYLIFVLTKLKSEDE 60
Query: 502 E-RH----LLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAK 556
R +L + + V ++ + + D R +I+ +A
Sbjct: 61 PTRSLSGLILKNNVKAHFQNFPNGVTDFIKSECL---NNIGDSSPLIRATVGILITTIAS 117
Query: 557 AAGLA---TMISTMRPDIDNIDEYVRNTTARAFA 587
L ++ + +D+ D A
Sbjct: 118 KGELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQ 151
Score = 33.1 bits (74), Expect = 0.31
Identities = 16/113 (14%), Positives = 39/113 (34%), Gaps = 7/113 (6%)
Query: 903 EIINRVVDDLKDENEQYRKMVMESIEKTMSNLGAADID--SRLEEQLIDGILYAFQ--EQ 958
+++++V+ + N K ++E+ T+ LG + + +Q I + +
Sbjct: 747 MVLHQLVEIINRPNTP--KTLLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRD 804
Query: 959 TTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLIS 1011
E G T+++ V C + N +R ++
Sbjct: 805 NEEKDSAFRGICTMISVNPSGVIQDFIFFCDAVA-SWINPKDDLRDMFCKILH 856
Score = 30.0 bits (66), Expect = 2.3
Identities = 12/87 (13%), Positives = 28/87 (32%), Gaps = 7/87 (8%)
Query: 450 KIMKLLLK-IKNGTPPMRKAALRQITDKAREFGAG------PLFNQILPLLMSPTLEDQE 502
M +L + + A I + + + G + +Q++ ++ P
Sbjct: 706 DFMPILGTNLNPEFISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTL 765
Query: 503 RHLLVKVIDRILYKLDDLVRPYVHKIL 529
I R+ Y V P + + +
Sbjct: 766 LENTAITIGRLGYVCPQEVAPMLQQFI 792
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment
{Human (Homo sapiens) [TaxId: 9606]}
Length = 579
Score = 67.1 bits (163), Expect = 8e-12
Identities = 58/451 (12%), Positives = 123/451 (27%), Gaps = 76/451 (16%)
Query: 904 IINRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAFQEQTTEDV 963
+N V D +D N R + + +TM +
Sbjct: 84 AVNSFVKDCEDPNPLIRALAV----RTMGCI----------------------------- 110
Query: 964 VMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMKTCQEE 1023
RV +C + L ++ VR+ AA ++++ + E
Sbjct: 111 ---------------RVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVE- 154
Query: 1024 KLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRH 1083
L + + + P V+ + + AL I + + + +L L
Sbjct: 155 --DQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECT 212
Query: 1084 EKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAI 1143
E Q +D + + E IC + L A+ + V + +
Sbjct: 213 EWGQIFILDCLSNYNPKDDR-----EAQSICERVTPRLSHANSAVVLSAVKVLMKFLELL 267
Query: 1144 GPHDVLATLL-----NNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNV 1198
+L L VA+ + P ++ +
Sbjct: 268 PKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQ---KRPEILKQEIKVFFVK 324
Query: 1199 QNGVLKALSFLFEYIGEMG-KDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVYGF 1257
N + + + + + I V L++ + D+ + A I A+ V
Sbjct: 325 YNDPIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQS 384
Query: 1258 G--CEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHPARK 1315
C L L+ + + + +++ ++ + L L L P +
Sbjct: 385 AERCVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESI--IATLCENLDSLDEPDAR 442
Query: 1316 VRDVYWKIYNSLYIGGQDALISAYPRIQNDM 1346
+ W +G I +
Sbjct: 443 AA-MIW------IVGEYAERIDNADELLESF 466
Score = 32.8 bits (74), Expect = 0.29
Identities = 38/285 (13%), Positives = 79/285 (27%), Gaps = 61/285 (21%)
Query: 901 ASEIINRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDG----ILYAFQ 956
A I RV L N +V+ +++ M L DS L+ ++
Sbjct: 234 AQSICERVTPRLSHANSA---VVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLS 290
Query: 957 EQTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAVV 1016
+ V L IV + + +K + + + N V+ + D++ R+A
Sbjct: 291 GEPEVQYVALRNINLIVQKRPEILKQEI-----KVFFVKYNDPIYVKLEKLDIMIRLA-- 343
Query: 1017 MKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLT 1076
+ +L LK T++ R
Sbjct: 344 ------------------------SQANIAQVLAELKEY-----ATEVDVDFVRKAVRAI 374
Query: 1077 PILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKAHKKAIRRATVNTF 1136
+ E+ E C+ + + YV + I ++ ++I
Sbjct: 375 GRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIR-DIFRKYPNKYESIIATLCENL 433
Query: 1137 GYI---------AKAIG--------PHDVLATLLNNLKVQERQNR 1164
+ +G ++L + L + Q +
Sbjct: 434 DSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFHDESTQVQ 478
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId:
9606]}
Length = 458
Score = 59.0 bits (141), Expect = 2e-09
Identities = 34/253 (13%), Positives = 84/253 (33%), Gaps = 12/253 (4%)
Query: 858 TLAFATSQIFLLTDLLFAYLKRDYTLENGIQKTIKGKPARLVGASEIINRVVDDLKDENE 917
+ + +R + ++ + T V A + + +++ E
Sbjct: 193 ATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYME 252
Query: 918 QYRKMVMESIEKTMSN-------LGAADIDSRLEEQLIDGILYAFQEQTTEDVVMLNGFG 970
Y + +I L + S + ++ +D + A E + +
Sbjct: 253 TYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEA-SEAAEQGRPPEHTSK 311
Query: 971 TIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLG 1030
+ + P L Q ++ + A + + TC E+ ++ H+
Sbjct: 312 FYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLL----ATCCEDDIVPHVL 367
Query: 1031 VVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENC 1090
+ E++ + + A I+ +++ P + +P L ++K+ V++
Sbjct: 368 PFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTA 427
Query: 1091 IDLVGRIADRGPE 1103
VGRI + PE
Sbjct: 428 AWTVGRICELLPE 440
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 861
Score = 58.7 bits (140), Expect = 4e-09
Identities = 43/282 (15%), Positives = 89/282 (31%), Gaps = 26/282 (9%)
Query: 902 SEIINRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDS--RLEEQLIDGILYAFQEQT 959
+ ++ + L E+ Q + + +I ++ + S + + L+ +++
Sbjct: 551 GQTMSVDENQLTLEDAQSLQELQSNILTVLAAVIRKSPSSVEPVADMLMGLFFRLLEKKD 610
Query: 960 TEDV--VMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVM 1017
+ + + + LGK + YL +L LN + V A I+ I+ +
Sbjct: 611 SAFIEDDVFYAISALAASLGKGFEKYLETFSPYLLKALNQVDSPVSITAVGFIADISNSL 670
Query: 1018 KTCQEEKLMGHLGVVLYEYLGEE--YPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL 1075
+ + + VL + + E+ ++L I + IG P + D++
Sbjct: 671 EE-DFRRYSDAMMNVLAQMISNPNARRELKPAVLSVFGDIASNIG-ADFIPYLNDIMALC 728
Query: 1076 TPILKNRHEK-----------VQENCIDLVGRIADRGPEYVSAREWM------RICFELL 1118
+ E V E +D I + A I
Sbjct: 729 VAAQNTKPENGTLEALDYQIKVLEAVLDAYVGIVAGLHDKPEALFPYVGTIFQFIAQVAE 788
Query: 1119 ELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQE 1160
+ + A RA V G IA P + V +
Sbjct: 789 DPQLYSEDATSRAAVGLIGDIAAMF-PDGSIKQFYGQDWVID 829
Score = 51.4 bits (121), Expect = 8e-07
Identities = 50/426 (11%), Positives = 106/426 (24%), Gaps = 56/426 (13%)
Query: 918 QYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAFQEQTTEDVVMLNGFGTIVNQLG 977
+ R+ + + M + + L + + G I + +
Sbjct: 384 RNREAAVMAFGSIMDGPDKVQRTYYVHQALPSILNLMNDQSLQVKETTAWCIGRIADSVA 443
Query: 978 KRV-KPYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEY 1036
+ + KV + I + + + ++
Sbjct: 444 ESIDPQQHLPGVVQACLIGLQDHPKVATNCSWTIINLVEQLAEATPSPIYNFYPALVDGL 503
Query: 1037 LG-----EEYPEVLGSILGALKAIVNVIG--------------MTKMTPPIKDLLPRLTP 1077
+G + S AL +V M K+ + +LT
Sbjct: 504 IGAANRIDNEFNARASAFSALTTMVEYATDTVAETSASISTFVMDKLGQTMSVDENQLTL 563
Query: 1078 ILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKAHKKAIRRATVNTFG 1137
+++Q N + ++ + + P V M + L K I
Sbjct: 564 EDAQSLQELQSNILTVLAAVIRKSPSSVEPVADMLMGLFFRLLEKKDSAFIEDDVFYAIS 623
Query: 1138 YIAKAIGPH------DVLATLLNNLKVQERQNRVCTTVAIAIVAETC----SPF--TVLP 1185
+A ++G LL L + + IA ++ + + ++
Sbjct: 624 ALAASLGKGFEKYLETFSPYLLKALNQVDSPVSITAVGFIADISNSLEEDFRRYSDAMMN 683
Query: 1186 ALMNEYRVPELN--VQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTA 1243
L P ++ VL + IG Y+ + L A +
Sbjct: 684 VLAQMISNPNARRELKPAVLSVFGDIASNIGADFIPYLNDIMALCVAAQNTKPENGT--- 740
Query: 1244 CATIKHMALGVYGFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQ 1303
V + + +V D E L +G I Q
Sbjct: 741 -----------------LEALDYQIKVLEAVLDAYVGIVAGLHDKPEALFPYVGT--IFQ 781
Query: 1304 YVLQGL 1309
++ Q
Sbjct: 782 FIAQVA 787
Score = 37.5 bits (85), Expect = 0.011
Identities = 38/278 (13%), Positives = 83/278 (29%), Gaps = 25/278 (8%)
Query: 985 PQICGTILWRLNNKSAKVRQQAADLISRIAVV-MKTCQEEKLMGHLGVVLYEYLGEEYPE 1043
QI L L + ++ AA LI+ IA + + +LM + + G E PE
Sbjct: 94 NQIKTNALTALVSIEPRIANAAAQLIAAIADIELPHGAWPELMKI----MVDNTGAEQPE 149
Query: 1044 -VLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKN-----RHEKVQENCIDLVGRI 1097
V + L AL + + + L I++ + V+ ++ +
Sbjct: 150 NVKRASLLALGYMCESAD-PQSQALVSSSNNILIAIVQGAQSTETSKAVRLAALNALADS 208
Query: 1098 ADRGPEYVSAREWMRICFEL-LELLKAHKKAIRRATVNTFGYIAKAIGPH--DVLATLLN 1154
+ ++ E +A ++ A I + L
Sbjct: 209 LIFIKNNMEREGERNYLMQVVCEATQAEDIEVQAAAFGCLCKIMSKYYTFMKPYMEQALY 268
Query: 1155 NLKVQERQ--NRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKALSFLFEY 1212
L + + N ++ + + C + + ++ L N L ++ +
Sbjct: 269 ALTIATMKSPNDKVASMTVEFWSTICEEEIDIAYELAQFPQSPLQSYNFALSSIKDVVPN 328
Query: 1213 IGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHM 1250
+ + D D +A A ++
Sbjct: 329 LLNLLTRQNE--------DPEDDDWNVSMSAGACLQLF 358
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 584
Score = 45.2 bits (106), Expect = 6e-05
Identities = 30/275 (10%), Positives = 86/275 (31%), Gaps = 45/275 (16%)
Query: 903 EIINRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAFQEQTTED 962
+++ + E+ R + E +E ++ ++ Q ++
Sbjct: 252 KLLRLLQCYPPPEDPAVRGRLTECLETILNKAQEPPKSKKV------------QHSNAKN 299
Query: 963 VVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMKTCQE 1022
V+ I++ + L + C + L ++ +R A + + +
Sbjct: 300 AVLFEAISLIIHHDSE--PNLLVRACNQLGQFLQHRETNLRYLALESMCTL--ASSEFSH 355
Query: 1023 EKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN------VIG-----MTKMTPPIKDL 1071
E + H+ V+ E V + L A+ + ++ + I++
Sbjct: 356 EAVKTHIETVINALKTERDVSVRQRAVDLLYAMCDRSNAQQIVAEMLSYLETADYSIREE 415
Query: 1072 LPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKAHKKAIRRA 1131
+ IL ++ +D + + +YVS + + +++++ ++ ++
Sbjct: 416 IVLKVAILAEKYAVDYTWYVDTILNLIRIAGDYVSE----EVWYRVIQIV-INRDDVQGY 470
Query: 1132 TVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVC 1166
T + L E +V
Sbjct: 471 AAKT-------------VFEALQAPACHENLVKVG 492
Score = 44.8 bits (105), Expect = 7e-05
Identities = 41/358 (11%), Positives = 112/358 (31%), Gaps = 46/358 (12%)
Query: 904 IINRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAFQE------ 957
I N + +DL N + + + ++N+G+ ++ ++ ++
Sbjct: 104 INNAIKNDLASRNPTFMGLAL----HCIANVGSREMAEAFAGEIPKILVAGDTMDSVKQS 159
Query: 958 ---------QTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAAD 1008
+T+ D+V + + + V L + +++ L K+ + + +
Sbjct: 160 AALCLLRLYRTSPDLVPMGDWTSRVVHLLNDQHLGVVTAATSLITTLAQKNPEEFKTSVS 219
Query: 1009 LISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN----------V 1058
L + T L Y Y P + +L L+
Sbjct: 220 LAVSRLSRIVTSASTDLQ------DYTYYFVPAPWLSVKLLRLLQCYPPPEDPAVRGRLT 273
Query: 1059 IGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELL 1118
+ + ++ N V I L+ +R C +L
Sbjct: 274 ECLETILNKAQEPPKSKKVQHSNAKNAVLFEAISLIIHHD------SEPNLLVRACNQLG 327
Query: 1119 ELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQN--RVCTTVAIAIVAE 1176
+ L+ + +R + + +A + H+ + T + + + A+ ++
Sbjct: 328 QFLQHRETNLRYLALESMCTLASSEFSHEAVKTHIETVINALKTERDVSVRQRAVDLLYA 387
Query: 1177 TCSPFTV---LPALMNEYRVPELNVQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDA 1231
C + +++ + +++ ++ ++ L E Y+ + L+ A
Sbjct: 388 MCDRSNAQQIVAEMLSYLETADYSIREEIVLKVAILAEKYAVDYTWYVDTILNLIRIA 445
Score = 36.7 bits (84), Expect = 0.023
Identities = 30/246 (12%), Positives = 79/246 (32%), Gaps = 44/246 (17%)
Query: 1022 EEKLMGHLGVVLYEYLGEEYPEVL----GSILG------------ALKAIVNVIGMTKMT 1065
EK +G+L + + E++ +I AL I N +G +M
Sbjct: 81 TEKQIGYLFISVL---VNSNSELIRLINNAIKNDLASRNPTFMGLALHCIAN-VGSREMA 136
Query: 1066 PPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKAHK 1125
+P+ + + + V+++ + R+ P+ V +W ++ LL
Sbjct: 137 EAFAGEIPK-ILVAGDTMDSVKQSAALCLLRLYRTSPDLVPMGDWTSR---VVHLLNDQH 192
Query: 1126 KAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLP 1185
+ A + +A + + + ++A++ ++ + +
Sbjct: 193 LGVVTAATSLITTLA----------------QKNPEEFKTSVSLAVSRLSRIVTSASTDL 236
Query: 1186 ALMNEYRVPELNVQNGVLKALSFL----FEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQ 1241
Y VP + +L+ L + + + + ++ + + H
Sbjct: 237 QDYTYYFVPAPWLSVKLLRLLQCYPPPEDPAVRGRLTECLETILNKAQEPPKSKKVQHSN 296
Query: 1242 TACATI 1247
A +
Sbjct: 297 AKNAVL 302
>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 959
Score = 39.1 bits (90), Expect = 0.004
Identities = 28/181 (15%), Positives = 63/181 (34%), Gaps = 3/181 (1%)
Query: 902 SEIINRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAFQEQTTE 961
E I + L N K + ++ + + + D + + GI
Sbjct: 676 PESIKPLAQPLLAPNVWELKGNIPAVTRLLKSFIKTDSSIFPDLVPVLGIFQRLIASKAY 735
Query: 962 DVVMLNGFGTIVNQLGKRV-KPYLPQICGTILWRLNN-KSAKVRQQAADLISRIAVVMKT 1019
+V + I+ + +PY+ QI +L RL N K+ + ++ I+ + +
Sbjct: 736 EVHGFDLLEHIMLLIDMNRLRPYIKQIAVLLLQRLQNSKTERYVKKLTVFFGLISNKLGS 795
Query: 1020 CQEEKLMGHLGVVLYE-YLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPI 1078
+ + L++ G L +I L + +IG+ M + + +
Sbjct: 796 DFLIHFIDEVQDGLFQQIWGNFIITTLPTIGNLLDRKIALIGVLNMVINGQFFQSKYPTL 855
Query: 1079 L 1079
+
Sbjct: 856 I 856
Score = 35.3 bits (80), Expect = 0.059
Identities = 13/137 (9%), Positives = 38/137 (27%), Gaps = 4/137 (2%)
Query: 985 PQICGTILWRLNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEV 1044
I I+ + + ++ Q + IS IA + L+ L L +
Sbjct: 84 ELIKKEIVPLMISLPNNLQVQIGEAISSIADSDFPDRWPTLLS----DLASRLSNDDMVT 139
Query: 1045 LGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEY 1104
+L +I + + + + + + + + + +
Sbjct: 140 NKGVLTVAHSIFKRWRPLFRSDELFLEIKLVLDVFTAPFLNLLKTVDEQITANENNKASL 199
Query: 1105 VSAREWMRICFELLELL 1121
+ + + +L
Sbjct: 200 NILFDVLLVLIKLYYDF 216
Score = 31.0 bits (69), Expect = 1.1
Identities = 15/101 (14%), Positives = 31/101 (30%), Gaps = 3/101 (2%)
Query: 1116 ELLELLKAHKKAIRRATVNTFGYIAKAIGPH---DVLATLLNNLKVQERQNRVCTTVAIA 1172
E++ L+ + ++ IA + P +L+ L + L +
Sbjct: 89 EIVPLMISLPNNLQVQIGEAISSIADSDFPDRWPTLLSDLASRLSNDDMVTNKGVLTVAH 148
Query: 1173 IVAETCSPFTVLPALMNEYRVPELNVQNGVLKALSFLFEYI 1213
+ + P L E ++ L L + E I
Sbjct: 149 SIFKRWRPLFRSDELFLEIKLVLDVFTAPFLNLLKTVDEQI 189
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 264
Score = 37.7 bits (86), Expect = 0.006
Identities = 37/234 (15%), Positives = 77/234 (32%), Gaps = 24/234 (10%)
Query: 913 KDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLID--GILYAFQEQTT--EDVVMLNG 968
+ E EQ K + + + M + +++ +L E D L+G
Sbjct: 1 RGEVEQM-KSCLRVLSQPMPPTAGEAEQAADQQEREGALELLADLCENMDNAADFCQLSG 59
Query: 969 FGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMKTCQEEKL-MG 1027
+V + L +A +R +AA LI + + QE+ L +G
Sbjct: 60 MHLLVGRY------------------LEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLG 101
Query: 1028 HLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQ 1087
L +L + V L A+ +V + D L ++ + +K++
Sbjct: 102 ALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLK 161
Query: 1088 ENCIDLVGRIADRGPEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAK 1141
L+ + PE+ M + +L+ L++ + +
Sbjct: 162 VKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVALVRTEHSPFHEHVLGALCSLVT 215
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId:
10090]}
Length = 434
Score = 34.4 bits (77), Expect = 0.10
Identities = 22/138 (15%), Positives = 45/138 (32%), Gaps = 4/138 (2%)
Query: 991 ILWRLNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVV--LYEYLG-EEYPEVLGS 1047
I+ +N+ + + + QA ++ + + G++ +LG + +
Sbjct: 18 IVKGINSNNLESQLQATQAARKLLS-REKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFE 76
Query: 1048 ILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSA 1107
AL I + +P +L + H + E + +G IA G +
Sbjct: 77 SAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDL 136
Query: 1108 REWMRICFELLELLKAHK 1125
LL LL
Sbjct: 137 VIKHGAIDPLLALLAVPD 154
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId:
9606]}
Length = 529
Score = 32.2 bits (71), Expect = 0.49
Identities = 19/134 (14%), Positives = 45/134 (33%), Gaps = 8/134 (5%)
Query: 995 LNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVV--LYEYLG-EEYPEVLGSILGA 1051
LN++ V +AA ++ +++ + +M +V + + E G
Sbjct: 26 LNDEDQVVVNKAAVMVHQLSKKEASRH--AIMRSPQMVSAIVRTMQNTNDVETARCTAGT 83
Query: 1052 LKAIV-NVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSAREW 1110
L + + G+ + +P L +L + + V I + + A
Sbjct: 84 LHNLSHHREGLLAIFK--SGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRL 141
Query: 1111 MRICFELLELLKAH 1124
+++ LL
Sbjct: 142 AGGLQKMVALLNKT 155
Score = 32.2 bits (71), Expect = 0.55
Identities = 13/107 (12%), Positives = 35/107 (32%), Gaps = 10/107 (9%)
Query: 996 NNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVV--LYEYLGEEYPEVLGSILGALK 1053
+ ++ + + +A + ++ L + + L + G L
Sbjct: 429 GVRMEEIVEGCTGALHILARDVHNRI---VIRGLNTIPLFVQLLYSPIENIQRVAAGVL- 484
Query: 1054 AIVNVIGMTKMTPPIKDL--LPRLTPILKNRHEKVQENCIDLVGRIA 1098
+ + I+ LT +L +R+E V ++ R++
Sbjct: 485 --CELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMS 529
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 457
Score = 31.7 bits (70), Expect = 0.58
Identities = 11/98 (11%), Positives = 28/98 (28%), Gaps = 12/98 (12%)
Query: 1033 LYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDL------LPRLTPILKNRHEKV 1086
+YL + + ++ K + +L +L++ ++ V
Sbjct: 7 AVQYLSSQDEKYQAIGAYYIQHT------CFQDESAKQQVYQLGGICKLVDLLRSPNQNV 60
Query: 1087 QENCIDLVGRIADRGPEYVSAREWMRICFELLELLKAH 1124
Q+ + + R E + LL+
Sbjct: 61 QQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRT 98
Score = 29.8 bits (65), Expect = 2.5
Identities = 13/135 (9%), Positives = 42/135 (31%), Gaps = 8/135 (5%)
Query: 1072 LPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKAHKKAIRRA 1131
+P+ L ++ EK Q + + + +L++LL++ + +++A
Sbjct: 4 IPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQA 63
Query: 1132 TVNTFGYIA-------KAIGPHDVLATLLN-NLKVQERQNRVCTTVAIAIVAETCSPFTV 1183
+ + + ++ + + + T + ++ T
Sbjct: 64 AAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEE 123
Query: 1184 LPALMNEYRVPELNV 1198
L A + +
Sbjct: 124 LIADALPVLADRVII 138
>d1ofla_ b.80.1.4 (A:) Chondroitinase B {Pedobacter heparinus
[TaxId: 984]}
Length = 481
Score = 31.0 bits (69), Expect = 1.2
Identities = 15/125 (12%), Positives = 32/125 (25%), Gaps = 26/125 (20%)
Query: 696 AGPGGDLIQETPTPGGVSSKRRSRWDETPQATPSGAMTPSAA------TPGGMTPSTP-- 747
+ ++ ++ W + + + P + P
Sbjct: 364 FKDKPYVYPFFKDDYFIAG--KNSWTGNVALGVEKGIPVNISANRSAYKPVKIKDIQPIE 421
Query: 748 ---------ITPHVGSTPLMTPSGVTPTGNKAMAMATPTPGHLAAMTPEQIQAYRWEREI 798
I+ + PL V P K M L+A + +A +
Sbjct: 422 GIALDLNALISKGITGKPLS-WDEVRPYWLKEMPGTYALTARLSADRAAKFKA------V 474
Query: 799 DERNR 803
+RN+
Sbjct: 475 IKRNK 479
>d1nvmb2 d.81.1.1 (B:132-286) Acetaldehyde dehydrogenase (acylating)
{Pseudomonas sp. [TaxId: 306]}
Length = 155
Score = 29.0 bits (65), Expect = 2.0
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 10/51 (19%)
Query: 543 ARVEGREIISNLA-KAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASA 592
A+V EI+++++ K+AG T NIDE+ TT++A V+ A
Sbjct: 17 AKVHYAEIVASISSKSAGPGTRA--------NIDEFTE-TTSKAIEVIGGA 58
>d1w9ca_ a.118.1.19 (A:) Exportin-1 (Xpo1, Crm1) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 321
Score = 29.8 bits (67), Expect = 2.0
Identities = 15/72 (20%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Query: 920 RKMVMESIEKTMSNLGAAD-IDSRLEEQLIDGILYAFQEQTTE--DVVMLNGFGTIVNQL 976
++ ++ I +S + L+D +L +Q + +L+ IVN+L
Sbjct: 46 KRETLKLISGWVSRSNDPQMVAENFVPPLLDAVLIDYQRNVPAAREPEVLSTMAIIVNKL 105
Query: 977 GKRVKPYLPQIC 988
G + +PQI
Sbjct: 106 GGHITAEIPQIF 117
>d1muwa_ c.1.15.3 (A:) D-xylose isomerase {Streptomyces
olivochromogenes [TaxId: 1963]}
Length = 386
Score = 29.6 bits (66), Expect = 2.5
Identities = 8/63 (12%), Positives = 15/63 (23%), Gaps = 1/63 (1%)
Query: 995 LNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGE-EYPEVLGSILGALK 1053
VR+ A R + + + G E + L + A
Sbjct: 103 FTANDRDVRRYALRKTIRNIDLAVELGAKTYVAWGGREGAESGAAKDVRVALDRMKEAFD 162
Query: 1054 AIV 1056
+
Sbjct: 163 LLG 165
>d1vrga1 c.14.1.4 (A:1-251) Propionyl-CoA carboxylase complex B
subunit, PccB {Thermotoga maritima [TaxId: 2336]}
Length = 251
Score = 28.9 bits (64), Expect = 3.5
Identities = 7/26 (26%), Positives = 18/26 (69%)
Query: 153 IEAQIRDIQNRKKDVSEGGGEEKQKR 178
+ +I +++ +K++ +GGG EK ++
Sbjct: 3 LRDKIEELKKIEKEIEQGGGPEKVEK 28
>d1on3a1 c.14.1.4 (A:8-260) Methylmalonyl-CoA carboxyltransferase
(transcarboxylase 12S) {Propionibacterium freudenreichii
[TaxId: 1744]}
Length = 253
Score = 29.1 bits (64), Expect = 3.7
Identities = 5/25 (20%), Positives = 15/25 (60%)
Query: 154 EAQIRDIQNRKKDVSEGGGEEKQKR 178
E ++ + +++ + GGGE + ++
Sbjct: 7 EGRVEQLAEQRQVIEAGGGERRVEK 31
>d1v97a4 d.87.2.1 (A:415-528) Xanthine oxidase, domain 4 (?) {Cow (Bos
taurus) [TaxId: 9913]}
Length = 114
Score = 27.5 bits (61), Expect = 4.7
Identities = 21/95 (22%), Positives = 27/95 (28%), Gaps = 23/95 (24%)
Query: 1119 ELLKAHKKAIRR----ATVN-----------------TFGYIAKAIGPHDVLATLLNNLK 1157
E A K+A RR A V Y A L T +
Sbjct: 2 EFFSAFKQASRREDDIAKVTCGMRVLFQPGSMQVKELALCYGGMADRTISALKT--TQKQ 59
Query: 1158 VQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYR 1192
+ + N A +AE S P M E+R
Sbjct: 60 LSKFWNEKLLQDVCAGLAEELSLSPDAPGGMIEFR 94
>d1xima_ c.1.15.3 (A:) D-xylose isomerase {Actinoplanes missouriensis
[TaxId: 1866]}
Length = 392
Score = 28.4 bits (63), Expect = 6.0
Identities = 8/43 (18%), Positives = 14/43 (32%)
Query: 996 NNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLG 1038
+ VR+ A + R + + L+ G EY
Sbjct: 103 TSNDRSVRRYAIRKVLRQMDLGAELGAKTLVLWGGREGAEYDS 145
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli
[TaxId: 562]}
Length = 276
Score = 28.3 bits (61), Expect = 6.0
Identities = 18/136 (13%), Positives = 35/136 (25%), Gaps = 8/136 (5%)
Query: 1116 ELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVA 1175
EL LL H R ++ G D + + + R + I+
Sbjct: 23 ELFRLLDDHNSLKRISSARVLQ----LRGGQDAVRLAIEFCSDKNYIRRD---IGAFILG 75
Query: 1176 ETCSPFTVLPALMNEYRVPELNVQN-GVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMD 1234
+ + N LN ++ V + Y + + D
Sbjct: 76 QIKICKKCEDNVFNILNNMALNDKSACVRATAIESTAQRCKKNPIYSPKIVEQSQITAFD 135
Query: 1235 RDLVHRQTACATIKHM 1250
+ R+ I +
Sbjct: 136 KSTNVRRATAFAISVI 151
>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 305
Score = 28.3 bits (62), Expect = 6.5
Identities = 17/82 (20%), Positives = 29/82 (35%), Gaps = 7/82 (8%)
Query: 1029 LGVVLYEYLGEEYPEVLGSILGALKAIVNVIGM-TKMTPPIKDLLPRLTPILKNRH---- 1083
+G + E + S + L I++VIG+ + P LPR K+
Sbjct: 201 VGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEK 260
Query: 1084 --EKVQENCIDLVGRIADRGPE 1103
+ E DL+ + P
Sbjct: 261 FVTDIDELGKDLLLKCLTFNPA 282
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB
{Bacillus caldotenax [TaxId: 1395]}
Length = 413
Score = 28.6 bits (63), Expect = 6.8
Identities = 37/212 (17%), Positives = 65/212 (30%), Gaps = 43/212 (20%)
Query: 121 KRGRWDQTSDGDVTPAKKKV--AAAEWEKEADVNIEAQIRDIQNR-----KKDVSEGGGE 173
+R R G+V ++ V A + + I++I+ + ++G
Sbjct: 221 ERIREVDALTGEVLGEREHVAIFPASHFVTREEKMRLAIQNIEQELEERLAELRAQGKLL 280
Query: 174 EKQKRVGLGESGYFDSDIYDGGGKFEGYVKSIADDDFDYQASFNQNKRSGYTAPAALLND 233
E Q+ L + +D ++ G G S + R + P LL+
Sbjct: 281 EAQR---LEQRTRYDLEMMREMGFCSGI----------ENYSRHLALRPPGSTPYTLLDY 327
Query: 234 IAQSEKDYDPFADRRQKTVAEKEDEYRAIRRRMIISPERVDPFAEGHLAAMTPEQIQAYR 293
D+ D T+ + Y R R + + +R
Sbjct: 328 FP---DDFLIIVDESHVTLPQLRGMYNGDRARKQVLVD------------------HGFR 366
Query: 294 WEREIDERNRPLTDDELEAMFPPGYKVLQPPA 325
+D NRPLT +E E V P
Sbjct: 367 LPSALD--NRPLTFEEFEQKINQIIYVSATPG 396
>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 206
Score = 27.9 bits (61), Expect = 7.4
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 549 EIISNLAKAAGLATMISTMRPDID 572
EI A+ G+ + +T R D
Sbjct: 16 EIWIAFAEKTGIDALKATTRDIPD 39
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.135 0.402
Gapped
Lambda K H
0.267 0.0659 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 5,252,046
Number of extensions: 265088
Number of successful extensions: 863
Number of sequences better than 10.0: 1
Number of HSP's gapped: 846
Number of HSP's successfully gapped: 64
Length of query: 1359
Length of database: 2,407,596
Length adjustment: 96
Effective length of query: 1263
Effective length of database: 1,089,516
Effective search space: 1376058708
Effective search space used: 1376058708
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (26.7 bits)