BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10462
(347 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 103/164 (62%), Gaps = 12/164 (7%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQ 69
D+ RR+F Q+ AI+YCH+ +VHRD+K ENLLLDD N+K++DFG + N
Sbjct: 108 DEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLS------NIMTDG 161
Query: 70 NLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQ 129
N +T CGS YA+PE++ G Y + D+WS G+VL+ M+ GRLPFDD L K+V
Sbjct: 162 NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVN 221
Query: 130 KRV-VFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWL 170
V V P+ LS ++LI ++ P++ RI +++IR+DPW
Sbjct: 222 SCVYVMPDF--LSPGAQSLIRRMIVADPMQ-RITIQEIRRDPWF 262
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ VKLAT + Q VA+K IS+ + + REI +K L+HP++I+ I
Sbjct: 20 GSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVIT 79
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEV 300
T + +++EYA G L + I +++ + ED+ + ++
Sbjct: 80 TPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQI 117
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 104/165 (63%), Gaps = 16/165 (9%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
+AR F Q+ A+ YCH+K +VHRD+K ENLLLD NIK++DFGF+ +++V
Sbjct: 112 EARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK----- 166
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQK 130
+TFCGS YA+PE+ +G Y + D+WS+GV+L+ +V G LPFD N EL ++V +
Sbjct: 167 -LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 225
Query: 131 ---RVVFPESPRLSSSCKALISN--ILSPVKFRIQMEDIRQDPWL 170
R+ F +S+ C+ L+ +L+P+K R +E I +D W+
Sbjct: 226 GKYRIPF----YMSTDCENLLKRFLVLNPIK-RGTLEQIMKDRWI 265
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 5/115 (4%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
++A VKLA ++VAIKII K Q L+K RE+ ++K L HPN+++ + IE
Sbjct: 23 GNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLF-REVRIMKILNHPNIVKLFEVIE 81
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNLSQTFSRCCYQDHI 316
T +Y+IMEYA G + + + + E +A + ++ + Q C+Q I
Sbjct: 82 TEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQ----YCHQKRI 132
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 103/165 (62%), Gaps = 16/165 (9%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
+AR F Q+ A+ YCH+K +VHRD+K ENLLLD NIK++DFGF+ +++ N
Sbjct: 114 EARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK----- 168
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQK 130
+TFCGS YA+PE+ +G Y + D+WS+GV+L+ +V G LPFD N EL ++V +
Sbjct: 169 -LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 227
Query: 131 ---RVVFPESPRLSSSCKALISN--ILSPVKFRIQMEDIRQDPWL 170
R+ F +S+ C+ L+ IL+P K R +E I +D W+
Sbjct: 228 GKYRIPF----YMSTDCENLLKKFLILNPSK-RGTLEQIMKDRWM 267
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 5/139 (3%)
Query: 178 GKSKSAPEVGIHXXXXXXXXXXXXSSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKF 237
G S ++ + H ++A VKLA ++VA+KII K Q L+K
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKL 60
Query: 238 LPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCY 297
RE+ ++K L HPN+++ + IET +Y++MEYA G + + + + E +A +
Sbjct: 61 F-REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF 119
Query: 298 SEVSNLSQTFSRCCYQDHI 316
++ + Q C+Q I
Sbjct: 120 RQIVSAVQ----YCHQKFI 134
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 103/165 (62%), Gaps = 16/165 (9%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
+AR F Q+ A+ YCH+K +VHRD+K ENLLLD NIK++DFGF+ +++ N
Sbjct: 114 EARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK----- 168
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQK 130
+TFCGS YA+PE+ +G Y + D+WS+GV+L+ +V G LPFD N EL ++V +
Sbjct: 169 -LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 227
Query: 131 ---RVVFPESPRLSSSCKALISN--ILSPVKFRIQMEDIRQDPWL 170
R+ F +S+ C+ L+ IL+P K R +E I +D W+
Sbjct: 228 GKYRIPF----YMSTDCENLLKKFLILNPSK-RGTLEQIMKDRWM 267
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 5/139 (3%)
Query: 178 GKSKSAPEVGIHXXXXXXXXXXXXSSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKF 237
G S ++ + H ++A VKLA ++VA+KII K Q L+K
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKL 60
Query: 238 LPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCY 297
RE+ ++K L HPN+++ + IET +Y++MEYA G + + + + E +A +
Sbjct: 61 F-REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF 119
Query: 298 SEVSNLSQTFSRCCYQDHI 316
++ + Q C+Q I
Sbjct: 120 RQIVSAVQ----YCHQKFI 134
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 103/165 (62%), Gaps = 16/165 (9%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
+AR F Q+ A+ YCH+K +VHRD+K ENLLLD NIK++DFGF+ +++ N
Sbjct: 114 EARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK----- 168
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQK 130
+TFCGS YA+PE+ +G Y + D+WS+GV+L+ +V G LPFD N EL ++V +
Sbjct: 169 -LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 227
Query: 131 ---RVVFPESPRLSSSCKALISN--ILSPVKFRIQMEDIRQDPWL 170
R+ F +S+ C+ L+ IL+P K R +E I +D W+
Sbjct: 228 GKYRIPF----YMSTDCENLLKKFLILNPSK-RGTLEQIMKDRWM 267
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 5/139 (3%)
Query: 178 GKSKSAPEVGIHXXXXXXXXXXXXSSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKF 237
G S ++ + H ++A VKLA ++VA++II K Q L+K
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKL 60
Query: 238 LPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCY 297
RE+ ++K L HPN+++ + IET +Y++MEYA G + + + + E +A +
Sbjct: 61 F-REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF 119
Query: 298 SEVSNLSQTFSRCCYQDHI 316
++ + Q C+Q I
Sbjct: 120 RQIVSAVQ----YCHQKFI 134
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 103/165 (62%), Gaps = 16/165 (9%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
+AR F Q+ A+ YCH+K +VHRD+K ENLLLD NIK++DFGF+ +++ N
Sbjct: 107 EARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK----- 161
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQK 130
+TFCGS YA+PE+ +G Y + D+WS+GV+L+ +V G LPFD N EL ++V +
Sbjct: 162 -LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 220
Query: 131 ---RVVFPESPRLSSSCKALISN--ILSPVKFRIQMEDIRQDPWL 170
R+ F +S+ C+ L+ IL+P K R +E I +D W+
Sbjct: 221 GKYRIPF----YMSTDCENLLKKFLILNPSK-RGTLEQIMKDRWM 260
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 63/115 (54%), Gaps = 5/115 (4%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
++A VKLA ++VA+KII K Q L+K RE+ ++K L HPN+++ + IE
Sbjct: 18 GNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLFEVIE 76
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNLSQTFSRCCYQDHI 316
T +Y++MEYA G + + + ++ E +A + ++ + Q C+Q I
Sbjct: 77 TEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQ----YCHQKFI 127
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 103/165 (62%), Gaps = 16/165 (9%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
+AR F Q+ A+ YCH+K +VHRD+K ENLLLD NIK++DFGF+ +++V
Sbjct: 115 EARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK----- 169
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQK 130
+ FCG+ YA+PE+ +G Y + D+WS+GV+L+ +V G LPFD N EL ++V +
Sbjct: 170 -LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 228
Query: 131 ---RVVFPESPRLSSSCKALISN--ILSPVKFRIQMEDIRQDPWL 170
R+ F +S+ C+ L+ +L+P+K R +E I +D W+
Sbjct: 229 GKYRIPF----YMSTDCENLLKRFLVLNPIK-RGTLEQIMKDRWI 268
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 5/115 (4%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
++A VKLA ++VAIKII K Q L+K RE+ ++K L HPN+++ + IE
Sbjct: 26 GNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLF-REVRIMKILNHPNIVKLFEVIE 84
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNLSQTFSRCCYQDHI 316
T +Y+IMEYA G + + + + E +A + ++ + Q C+Q I
Sbjct: 85 TEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQY----CHQKRI 135
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 103/165 (62%), Gaps = 16/165 (9%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
+AR F Q+ A+ YCH+K +VHRD+K ENLLLD NIK++DFGF+ +++ N
Sbjct: 114 EARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-----K 168
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQK 130
L E FCGS YA+PE+ +G Y + D+WS+GV+L+ +V G LPFD N EL ++V +
Sbjct: 169 LDE-FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 227
Query: 131 ---RVVFPESPRLSSSCKALISN--ILSPVKFRIQMEDIRQDPWL 170
R+ F +S+ C+ L+ IL+P K R +E I +D W+
Sbjct: 228 GKYRIPF----YMSTDCENLLKKFLILNPSK-RGTLEQIMKDRWM 267
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 5/139 (3%)
Query: 178 GKSKSAPEVGIHXXXXXXXXXXXXSSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKF 237
G S ++ + H ++A VKLA ++VA++II K Q L+K
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKL 60
Query: 238 LPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCY 297
RE+ ++K L HPN+++ + IET +Y++MEYA G + + + + E +A +
Sbjct: 61 F-REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF 119
Query: 298 SEVSNLSQTFSRCCYQDHI 316
++ + Q C+Q I
Sbjct: 120 RQIVSAVQ----YCHQKFI 134
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 102/165 (61%), Gaps = 16/165 (9%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
+AR F Q+ A+ YCH+K +VHRD+K ENLLLD NIK++DFGF+ +++ N
Sbjct: 114 EARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK----- 168
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQK 130
+ FCG+ YA+PE+ +G Y + D+WS+GV+L+ +V G LPFD N EL ++V +
Sbjct: 169 -LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 227
Query: 131 ---RVVFPESPRLSSSCKALISN--ILSPVKFRIQMEDIRQDPWL 170
R+ F +S+ C+ L+ IL+P K R +E I +D W+
Sbjct: 228 GKYRIPF----YMSTDCENLLKKFLILNPSK-RGTLEQIMKDRWM 267
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 5/139 (3%)
Query: 178 GKSKSAPEVGIHXXXXXXXXXXXXSSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKF 237
G S ++ + H ++A VKLA ++VA+KII K Q L+K
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKL 60
Query: 238 LPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCY 297
RE+ ++K L HPN+++ + IET +Y++MEYA G + + + + E +A +
Sbjct: 61 F-REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF 119
Query: 298 SEVSNLSQTFSRCCYQDHI 316
++ + Q C+Q I
Sbjct: 120 RQIVSAVQ----YCHQKFI 134
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 131 bits (329), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 103/165 (62%), Gaps = 16/165 (9%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
+AR F Q+ A+ YCH+K +VHRD+K ENLLLD NIK++DFGF+ +++V N
Sbjct: 115 EARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNK----- 169
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQK 130
+TFCGS YA+PE+ +G Y + D+WS+GV+L+ +V G LPFD N EL ++V +
Sbjct: 170 -LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 228
Query: 131 ---RVVFPESPRLSSSCK--ALISNILSPVKFRIQMEDIRQDPWL 170
R+ F +S+ C+ +L+P+K R +E I +D W+
Sbjct: 229 GKYRIPF----YMSTDCENLLKKLLVLNPIK-RGSLEQIMKDRWM 268
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 63/115 (54%), Gaps = 5/115 (4%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
++A VKLA ++VA+KII K Q L+K RE+ ++K L HPN+++ + IE
Sbjct: 26 GNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLF-REVRIMKILNHPNIVKLFEVIE 84
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNLSQTFSRCCYQDHI 316
T +Y++MEYA G + + + + E +A + ++ + Q C+Q +I
Sbjct: 85 TEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ----YCHQKYI 135
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 100/164 (60%), Gaps = 16/164 (9%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
+AR F Q+ A+ YCH+K +VHRD+K ENLLLD NIK++DFGF+ +++ N
Sbjct: 114 EARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNK----- 168
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQK 130
+ FCG+ YA+PE+ +G Y + D+WS+GV+L+ +V G LPFD N EL ++V +
Sbjct: 169 -LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 227
Query: 131 ---RVVFPESPRLSSSCKALISN--ILSPVKFRIQMEDIRQDPW 169
R+ F S+ C+ L+ IL+P K R +E I +D W
Sbjct: 228 GKYRIPF----YXSTDCENLLKKFLILNPSK-RGTLEQIXKDRW 266
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 5/139 (3%)
Query: 178 GKSKSAPEVGIHXXXXXXXXXXXXSSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKF 237
G S ++ + H ++A VKLA ++VA+KII K Q L+K
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKL 60
Query: 238 LPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCY 297
RE+ + K L HPN+++ + IET +Y++ EYA G + + + E +A +
Sbjct: 61 F-REVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKF 119
Query: 298 SEVSNLSQTFSRCCYQDHI 316
++ + Q C+Q I
Sbjct: 120 RQIVSAVQ----YCHQKFI 134
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 100/166 (60%), Gaps = 12/166 (7%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
+ARR+F Q+ A++YCH+ +VHRD+K ENLLLD+ N+K++DFG + N N
Sbjct: 114 EARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS------NIMTDGN 167
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQK 130
+T CGS YA+PE++ G Y + D+WS GV+L+ M+ RLPFDD + L K +
Sbjct: 168 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISN 227
Query: 131 RV-VFPE--SPRLSSSCKALISNILSPVKFRIQMEDIRQDPWLKED 173
V P+ SP + K ++ I++P+ RI + +I QD W K D
Sbjct: 228 GVYTLPKFLSPGAAGLIKRML--IVNPLN-RISIHEIMQDDWFKVD 270
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 56/111 (50%)
Query: 181 KSAPEVGIHXXXXXXXXXXXXSSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPR 240
KS+ G H S+ VKLA Q VA+KII+K ++ + R
Sbjct: 4 KSSLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIER 63
Query: 241 EIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDED 291
EI ++ L+HP++I+ I++ + +++EYA N ++++++ +++
Sbjct: 64 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQE 114
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 100/166 (60%), Gaps = 12/166 (7%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
+ARR+F Q+ A++YCH+ +VHRD+K ENLLLD+ N+K++DFG + N N
Sbjct: 113 EARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS------NIMTDGN 166
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQK 130
+T CGS YA+PE++ G Y + D+WS GV+L+ M+ RLPFDD + L K +
Sbjct: 167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISN 226
Query: 131 RV-VFPE--SPRLSSSCKALISNILSPVKFRIQMEDIRQDPWLKED 173
V P+ SP + K ++ I++P+ RI + +I QD W K D
Sbjct: 227 GVYTLPKFLSPGAAGLIKRML--IVNPLN-RISIHEIMQDDWFKVD 269
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 56/111 (50%)
Query: 181 KSAPEVGIHXXXXXXXXXXXXSSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPR 240
KS+ G H S+ VKLA Q VA+KII+K ++ + R
Sbjct: 3 KSSLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIER 62
Query: 241 EIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDED 291
EI ++ L+HP++I+ I++ + +++EYA N ++++++ +++
Sbjct: 63 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQE 113
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 100/166 (60%), Gaps = 12/166 (7%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
+ARR F Q+ A+DYCH+ VVHRD+K EN+LLD N K++DFG + S
Sbjct: 112 EARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS------DGE 165
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQK 130
T CGS YA+PE++ G Y + DIWS GV+L+A++ G LPFDD + L K+++
Sbjct: 166 FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRG 225
Query: 131 RVVF-PESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKED 173
V + PE L+ S L+ ++L P+K R ++DIR+ W K+D
Sbjct: 226 GVFYIPEY--LNRSVATLLMHMLQVDPLK-RATIKDIREHEWFKQD 268
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQA-PIDYLKKFLPREIEVVKGLKHPNLIRFLQAI 260
++ VK+ VA+KI+++ + +D + K + REI+ +K +HP++I+ Q I
Sbjct: 22 GTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGK-IKREIQNLKLFRHPHIIKLYQVI 80
Query: 261 ETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEV 300
T +++MEY G L + I K ++E +A + ++
Sbjct: 81 STPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQI 120
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 98/166 (59%), Gaps = 12/166 (7%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
+ARR+F Q+ A++YCH+ +VHRD+K ENLLLD+ N+K++DFG + N N
Sbjct: 104 EARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS------NIMTDGN 157
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQK 130
+T CGS YA+PE++ G Y + D+WS GV+L+ M+ RLPFDD + L K +
Sbjct: 158 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISN 217
Query: 131 RV-VFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKED 173
V P+ LS LI +L +P+ RI + +I QD W K D
Sbjct: 218 GVYTLPKF--LSPGAAGLIKRMLIVNPLN-RISIHEIMQDDWFKVD 260
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 51/90 (56%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ VKLA Q VA+KII+K ++ + REI ++ L+HP++I+ I+
Sbjct: 15 GSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK 74
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDED 291
+ + +++EYA N ++++++ +++
Sbjct: 75 SKDEIIMVIEYAGNELFDYIVQRDKMSEQE 104
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 98/166 (59%), Gaps = 12/166 (7%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
+ARR+F Q+ A++YCH+ +VHRD+K ENLLLD+ N+K++DFG + N N
Sbjct: 108 EARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS------NIMTDGN 161
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQK 130
+T CGS YA+PE++ G Y + D+WS GV+L+ M+ RLPFDD + L K +
Sbjct: 162 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISN 221
Query: 131 RV-VFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKED 173
V P+ LS LI +L +P+ RI + +I QD W K D
Sbjct: 222 GVYTLPKF--LSPGAAGLIKRMLIVNPLN-RISIHEIMQDDWFKVD 264
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 53/105 (50%)
Query: 187 GIHXXXXXXXXXXXXSSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVK 246
G H S+ VKLA Q VA+KII+K ++ + REI ++
Sbjct: 4 GAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLR 63
Query: 247 GLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDED 291
L+HP++I+ I++ + +++EYA N ++++++ +++
Sbjct: 64 LLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQE 108
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 103/166 (62%), Gaps = 12/166 (7%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
+ARR F Q+ A+DYCH+ VVHRD+K EN+LLD N K++DFG + N +
Sbjct: 112 EARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS-----NMMSDGEF 166
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQK 130
L ++ CGS YA+PE++ G Y + DIWS GV+L+A++ G LPFDD + L K+++
Sbjct: 167 LRDS-CGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRG 225
Query: 131 RVVF-PESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKED 173
V + PE L+ S L+ ++L P+K R ++DIR+ W K+D
Sbjct: 226 GVFYIPEY--LNRSVATLLMHMLQVDPLK-RATIKDIREHEWFKQD 268
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQA-PIDYLKKFLPREIEVVKGLKHPNLIRFLQAI 260
++ VK+ VA+KI+++ + +D + K + REI+ +K +HP++I+ Q I
Sbjct: 22 GTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGK-IKREIQNLKLFRHPHIIKLYQVI 80
Query: 261 ETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEV 300
T +++MEY G L + I K ++E +A + ++
Sbjct: 81 STPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQI 120
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 99/166 (59%), Gaps = 12/166 (7%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
++RR F Q+ +DYCH+ VVHRD+K EN+LLD N K++DFG + S
Sbjct: 117 ESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS------DGE 170
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQK 130
CGS YA+PE++ G Y + DIWS GV+L+A++ G LPFDD + L K++
Sbjct: 171 FLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICD 230
Query: 131 RVVFPESPR-LSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKED 173
+ + +P+ L+ S +L+ ++L P+K R ++DIR+ W K+D
Sbjct: 231 GIFY--TPQYLNPSVISLLKHMLQVDPMK-RATIKDIREHEWFKQD 273
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQ-APIDYLKKFLPREIEVVKGLKHPNLIRFLQAI 260
++ VK+ VA+KI+++ + +D + K + REI+ +K +HP++I+ Q I
Sbjct: 27 GTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGK-IRREIQNLKLFRHPHIIKLYQVI 85
Query: 261 ETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEV 300
T ++++MEY G L + I K +DE ++ + ++
Sbjct: 86 STPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQI 125
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 99/177 (55%), Gaps = 7/177 (3%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQ 69
++ R F Q+ A+ Y H + HRD+K ENLL D+ + +KL DFG K N DY
Sbjct: 108 EETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAK-PKGNKDYHL 166
Query: 70 NLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQ 129
+T CGS AYA+PE+++G Y ++D+WSMG++L+ ++ G LPFDD N L K++
Sbjct: 167 ---QTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIM 223
Query: 130 KRVVFPESPRLSSSCKALISNILS-PVKFRIQMEDIRQDPWLKEDSN-PVGKSKSAP 184
R + LS S L+ +L K RI M+++ PW+ +D N PV P
Sbjct: 224 -RGKYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQDYNYPVEWQSKNP 279
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPR---EIEVVKGLKHPNLIRFLQ 258
+A VKLA + VAIKI+ K + L LPR EIE +K L+H ++ +
Sbjct: 21 GGFAKVKLACHILTGEMVAIKIMDK-----NTLGSDLPRIKTEIEALKNLRHQHICQLYH 75
Query: 259 AIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEV 300
+ET +++++++EY G L + I + + E++ + + ++
Sbjct: 76 VLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQI 117
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 99/179 (55%), Gaps = 11/179 (6%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
A+R+F QL + Y H + HRDIK ENLLLD++ N+K+SDFG A + NN ++ L
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN---RERL 162
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS--ELLKQVQ 129
CG+ Y +PE+LK + + D+WS G+VL AM+ G LP+D + S E +
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE 222
Query: 130 KRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
K+ ++ S+ AL+ IL +P RI + DI++D W + P+ K P V
Sbjct: 223 KKTYLNPWKKIDSAPLALLHKILVENP-SARITIPDIKKDRWY---NKPLKKGAKRPRV 277
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V+LA + + VA+KI+ +A +D + + +EI + K L H N+++F
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRA-VD-CPENIKKEIXINKMLNHENVVKFYGHRR 74
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
+ Y+ +EY G L + I + + E A
Sbjct: 75 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 106
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 99/179 (55%), Gaps = 11/179 (6%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
A+R+F QL + Y H + HRDIK ENLLLD++ N+K+SDFG A + NN ++ L
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN---RERL 162
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS--ELLKQVQ 129
CG+ Y +PE+LK + + D+WS G+VL AM+ G LP+D + S E +
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE 222
Query: 130 KRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
K+ ++ S+ AL+ IL +P RI + DI++D W + P+ K P V
Sbjct: 223 KKTYLNPWKKIDSAPLALLHKILVENP-SARITIPDIKKDRWY---NKPLKKGAKRPRV 277
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V+LA + + VA+KI+ +A +D + + +EI + K L H N+++F
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRA-VD-CPENIKKEICINKMLNHENVVKFYGHRR 74
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
+ Y+ +EY G L + I + + E A
Sbjct: 75 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 106
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 99/179 (55%), Gaps = 11/179 (6%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
A+R+F QL + Y H + HRDIK ENLLLD++ N+K+SDFG A + NN ++ L
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN---RERL 162
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS--ELLKQVQ 129
CG+ Y +PE+LK + + D+WS G+VL AM+ G LP+D + S E +
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE 222
Query: 130 KRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
K+ ++ S+ AL+ IL +P RI + DI++D W + P+ K P V
Sbjct: 223 KKTYLNPWKKIDSAPLALLHKILVENP-SARITIPDIKKDRWY---NKPLKKGAKRPRV 277
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V+LA + + VA+KI+ +A +D + + +EI + K L H N+++F
Sbjct: 17 GAAGEVQLAVNRVTEEAVAVKIVDMKRA-VD-CPENIKKEICINKMLNHENVVKFYGHRR 74
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
+ Y+ +EY G L + I + + E A
Sbjct: 75 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 106
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 99/179 (55%), Gaps = 11/179 (6%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
A+R+F QL + Y H + HRDIK ENLLLD++ N+K+SDFG A + NN ++ L
Sbjct: 105 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN---RERL 161
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS--ELLKQVQ 129
CG+ Y +PE+LK + + D+WS G+VL AM+ G LP+D + S E +
Sbjct: 162 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE 221
Query: 130 KRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
K+ ++ S+ AL+ IL +P RI + DI++D W + P+ K P V
Sbjct: 222 KKTYLNPWKKIDSAPLALLHKILVENP-SARITIPDIKKDRWY---NKPLKKGAKRPRV 276
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V+LA + + VA+KI+ +A +D + + +EI + K L H N+++F
Sbjct: 16 GAYGEVQLAVNRVTEEAVAVKIVDMKRA-VD-CPENIKKEICINKMLNHENVVKFYGHRR 73
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
+ Y+ +EY G L + I + + E A
Sbjct: 74 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 105
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 99/179 (55%), Gaps = 11/179 (6%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
A+R+F QL + Y H + HRDIK ENLLLD++ N+K+SDFG A + NN ++ L
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN---RERL 163
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS--ELLKQVQ 129
CG+ Y +PE+LK + + D+WS G+VL AM+ G LP+D + S E +
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE 223
Query: 130 KRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
K+ ++ S+ AL+ IL +P RI + DI++D W + P+ K P V
Sbjct: 224 KKTYLNPWKKIDSAPLALLHKILVENP-SARITIPDIKKDRWY---NKPLKKGAKRPRV 278
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V+LA + + VA+KI+ +A +D + + +EI + K L H N+++F
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKRA-VD-CPENIKKEICINKMLNHENVVKFYGHRR 75
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
+ Y+ +EY G L + I + + E A
Sbjct: 76 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 107
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 99/179 (55%), Gaps = 11/179 (6%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
A+R+F QL + Y H + HRDIK ENLLLD++ N+K+SDFG A + NN ++ L
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN---RERL 163
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS--ELLKQVQ 129
CG+ Y +PE+LK + + D+WS G+VL AM+ G LP+D + S E +
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE 223
Query: 130 KRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
K+ ++ S+ AL+ IL +P RI + DI++D W + P+ K P V
Sbjct: 224 KKTYLNPWKKIDSAPLALLHKILVENP-SARITIPDIKKDRWY---NKPLKKGAKRPRV 278
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V+LA + + VA+KI+ +A +D + + +EI + K L H N+++F
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKRA-VD-CPENIKKEICINKMLNHENVVKFYGHRR 75
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
+ Y+ +EY G L + I + + E A
Sbjct: 76 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 107
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 99/179 (55%), Gaps = 11/179 (6%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
A+R+F QL + Y H + HRDIK ENLLLD++ N+K+SDFG A + NN ++ L
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN---RERL 163
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS--ELLKQVQ 129
CG+ Y +PE+LK + + D+WS G+VL AM+ G LP+D + S E +
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE 223
Query: 130 KRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
K+ ++ S+ AL+ IL +P RI + DI++D W + P+ K P V
Sbjct: 224 KKTYLNPWKKIDSAPLALLHKILVENP-SARITIPDIKKDRWY---NKPLKKGAKRPRV 278
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V+LA + + VA+KI+ +A +D + + +EI + K L H N+++F
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKRA-VD-CPENIKKEICINKMLNHENVVKFYGHRR 75
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
+ Y+ +EY G L + I + + E A
Sbjct: 76 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 107
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 99/179 (55%), Gaps = 11/179 (6%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
A+R+F QL + Y H + HRDIK ENLLLD++ N+K+SDFG A + NN ++ L
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN---RERL 163
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS--ELLKQVQ 129
CG+ Y +PE+LK + + D+WS G+VL AM+ G LP+D + S E +
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE 223
Query: 130 KRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
K+ ++ S+ AL+ IL +P RI + DI++D W + P+ K P V
Sbjct: 224 KKTYLNPWKKIDSAPLALLHKILVENP-SARITIPDIKKDRWY---NKPLKKGAKRPRV 278
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V+LA + + VA+KI+ +A +D + + +EI + K L H N+++F
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKRA-VD-CPENIKKEICINKMLNHENVVKFYGHRR 75
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
+ Y+ +EY G L + I + + E A
Sbjct: 76 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 107
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 99/179 (55%), Gaps = 11/179 (6%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
A+R+F QL + Y H + HRDIK ENLLLD++ N+K+SDFG A + NN ++ L
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN---RERL 162
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS--ELLKQVQ 129
CG+ Y +PE+LK + + D+WS G+VL AM+ G LP+D + S E +
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE 222
Query: 130 KRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
K+ ++ S+ AL+ IL +P RI + DI++D W + P+ K P V
Sbjct: 223 KKTYLNPWKKIDSAPLALLHKILVENP-SARITIPDIKKDRWY---NKPLKKGAKRPRV 277
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V+LA + + VA+KI+ +A +D + + +EI + K L H N+++F
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRA-VD-CPENIKKEICINKMLNHENVVKFYGHRR 74
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
+ Y+ +EY G L + I + + E A
Sbjct: 75 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 106
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 98/177 (55%), Gaps = 11/177 (6%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
A+R+F QL + Y H + HRDIK ENLLLD++ N+K+SDFG A + NN ++ L
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN---RERL 163
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS--ELLKQVQ 129
CG+ Y +PE+LK + + D+WS G+VL AM+ G LP+D + S E +
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE 223
Query: 130 KRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAP 184
K+ ++ S+ AL+ IL +P RI + DI++D W + P+ K P
Sbjct: 224 KKTYLNPWKKIDSAPLALLHKILVENP-SARITIPDIKKDRWY---NKPLKKGAKRP 276
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V+LA + + VA+KI+ +A +D + + +EI + K L H N+++F
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKRA-VD-CPENIKKEICINKMLNHENVVKFYGHRR 75
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
+ Y+ +EY G L + I + + E A
Sbjct: 76 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 107
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 93/162 (57%), Gaps = 8/162 (4%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
A+R+F QL + Y H + HRDIK ENLLLD++ N+K+SDFG A + NN ++ L
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN---RERL 162
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS--ELLKQVQ 129
CG+ Y +PE+LK + + D+WS G+VL AM+ G LP+D + S E +
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE 222
Query: 130 KRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPW 169
K+ ++ S+ AL+ IL +P RI + DI++D W
Sbjct: 223 KKTYLNPWKKIDSAPLALLHKILVENP-SARITIPDIKKDRW 263
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V+LA + + VA+KI+ +A +D + + +EI + K L H N+++F
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRA-VD-CPENIKKEICINKMLNHENVVKFYGHRR 74
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
+ Y+ +EY G L + I + + E A
Sbjct: 75 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 106
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 93/162 (57%), Gaps = 8/162 (4%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
A+R+F QL + Y H + HRDIK ENLLLD++ N+K+SDFG A + NN ++ L
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN---RERL 162
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS--ELLKQVQ 129
CG+ Y +PE+LK + + D+WS G+VL AM+ G LP+D + S E +
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE 222
Query: 130 KRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPW 169
K+ ++ S+ AL+ IL +P RI + DI++D W
Sbjct: 223 KKTYLNPWKKIDSAPLALLHKILVENP-SARITIPDIKKDRW 263
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V+LA + + VA+KI+ +A +D + + +EI + K L H N+++F
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRA-VD-CPENIKKEICINKMLNHENVVKFYGHRR 74
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
+ Y+ +EY G L + I + + E A
Sbjct: 75 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 106
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 93/162 (57%), Gaps = 8/162 (4%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
A+R+F QL + Y H + HRDIK ENLLLD++ N+K+SDFG A + NN ++ L
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN---RERL 163
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS--ELLKQVQ 129
CG+ Y +PE+LK + + D+WS G+VL AM+ G LP+D + S E +
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE 223
Query: 130 KRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPW 169
K+ ++ S+ AL+ IL +P RI + DI++D W
Sbjct: 224 KKTYLNPWKKIDSAPLALLHKILVENP-SARITIPDIKKDRW 264
Score = 34.3 bits (77), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V+LA + + VA+KI+ +A +D + + +EI + L H N+++F
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKRA-VD-CPENIKKEICINAMLNHENVVKFYGHRR 75
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
+ Y+ +EY G L + I + + E A
Sbjct: 76 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 107
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 93/162 (57%), Gaps = 8/162 (4%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
A+R+F QL + Y H + HRDIK ENLLLD++ N+K+SDFG A + NN ++ L
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN---RERL 162
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS--ELLKQVQ 129
CG+ Y +PE+LK + + D+WS G+VL AM+ G LP+D + S E +
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE 222
Query: 130 KRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPW 169
K+ ++ S+ AL+ IL +P RI + DI++D W
Sbjct: 223 KKTYLNPWKKIDSAPLALLHKILVENP-SARITIPDIKKDRW 263
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V+LA + + VA+KI+ +A +D + + +EI + K L H N+++F
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRA-VD-CPENIKKEICINKMLNHENVVKFYGHRR 74
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
+ Y+ +EY G L + I + + E A
Sbjct: 75 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 106
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 93/162 (57%), Gaps = 8/162 (4%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
A+R+F QL + Y H + HRDIK ENLLLD++ N+K+SDFG A + NN ++ L
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN---RERL 163
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS--ELLKQVQ 129
CG+ Y +PE+LK + + D+WS G+VL AM+ G LP+D + S E +
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE 223
Query: 130 KRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPW 169
K+ ++ S+ AL+ IL +P RI + DI++D W
Sbjct: 224 KKTYLNPWKKIDSAPLALLHKILVENP-SARITIPDIKKDRW 264
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V+LA + + VA+KI+ +A +D + + +EI + K L H N+++F
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKRA-VD-CPENIKKEICINKMLNHENVVKFYGHRR 75
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
+ Y+ +EY G L + I + + E A
Sbjct: 76 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 107
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 93/162 (57%), Gaps = 8/162 (4%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
A+R+F QL + Y H + HRDIK ENLLLD++ N+K+SDFG A + NN ++ L
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN---RERL 162
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS--ELLKQVQ 129
CG+ Y +PE+LK + + D+WS G+VL AM+ G LP+D + S E +
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE 222
Query: 130 KRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPW 169
K+ ++ S+ AL+ IL +P RI + DI++D W
Sbjct: 223 KKTYLNPWKKIDSAPLALLHKILVENP-SARITIPDIKKDRW 263
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V+LA + + VA+KI+ +A +D + + +EI + K L H N+++F
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRA-VD-CPENIKKEICINKMLNHENVVKFYGHRR 74
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
+ Y+ +EY G L + I + + E A
Sbjct: 75 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 106
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 98/179 (54%), Gaps = 11/179 (6%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
A+R+F QL + Y H + HRDIK ENLLLD++ N+K+SDFG A + NN ++ L
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN---RERL 162
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS--ELLKQVQ 129
G+ Y +PE+LK + + D+WS G+VL AM+ G LP+D + S E +
Sbjct: 163 LNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKE 222
Query: 130 KRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
K+ ++ S+ AL+ IL +P RI + DI++D W + P+ K P V
Sbjct: 223 KKTYLNPWKKIDSAPLALLHKILVENP-SARITIPDIKKDRWY---NKPLKKGAKRPRV 277
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V+LA + + VA+KI+ +A +D + + +EI + K L H N+++F
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRA-VD-CPENIKKEICINKMLNHENVVKFYGHRR 74
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
+ Y+ +EY G L + I + + E A
Sbjct: 75 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 106
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 98/179 (54%), Gaps = 11/179 (6%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
A+R+F QL + Y H + HRDIK ENLLLD++ N+K+SDFG A + NN ++ L
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN---RERL 162
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS--ELLKQVQ 129
G+ Y +PE+LK + + D+WS G+VL AM+ G LP+D + S E +
Sbjct: 163 LNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE 222
Query: 130 KRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
K+ ++ S+ AL+ IL +P RI + DI++D W + P+ K P V
Sbjct: 223 KKTYLNPWKKIDSAPLALLHKILVENP-SARITIPDIKKDRWY---NKPLKKGAKRPRV 277
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V+LA + + VA+KI+ +A +D + + +EI + K L H N+++F
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRA-VD-CPENIKKEIXINKMLNHENVVKFYGHRR 74
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
+ Y+ +EY G L + I + + E A
Sbjct: 75 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 106
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 98/179 (54%), Gaps = 11/179 (6%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
A+R+F QL + Y H + HRDIK ENLLLD++ N+K+SDFG A + NN ++ L
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN---RERL 162
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS--ELLKQVQ 129
G+ Y +PE+LK + + D+WS G+VL AM+ G LP+D + S E +
Sbjct: 163 LNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE 222
Query: 130 KRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
K+ ++ S+ AL+ IL +P RI + DI++D W + P+ K P V
Sbjct: 223 KKTYLNPWKKIDSAPLALLHKILVENP-SARITIPDIKKDRWY---NKPLKKGAKRPRV 277
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V+LA + + VA+KI+ +A +D + + +EI + K L H N+++F
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRA-VD-CPENIKKEICINKMLNHENVVKFYGHRR 74
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
+ Y+ +EY G L + I + + E A
Sbjct: 75 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 106
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 97/177 (54%), Gaps = 11/177 (6%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
A+R+F QL + Y H + HRDIK ENLLLD++ N+K+SDFG A + NN ++ L
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN---RERL 163
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS--ELLKQVQ 129
G+ Y +PE+LK + + D+WS G+VL AM+ G LP+D + S E +
Sbjct: 164 LNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE 223
Query: 130 KRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAP 184
K+ ++ S+ AL+ IL +P RI + DI++D W + P+ K P
Sbjct: 224 KKTYLNPWKKIDSAPLALLHKILVENP-SARITIPDIKKDRWY---NKPLKKGAKRP 276
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V+LA + + VA+KI+ +A +D + + +EI + K L H N+++F
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKRA-VD-CPENIKKEIXINKMLNHENVVKFYGHRR 75
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
+ Y+ +EY G L + I + + E A
Sbjct: 76 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 107
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 92/162 (56%), Gaps = 8/162 (4%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
A+R+F QL + Y H + HRDIK ENLLLD++ N+K+SDFG A + NN ++ L
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN---RERL 162
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS--ELLKQVQ 129
G+ Y +PE+LK + + D+WS G+VL AM+ G LP+D + S E +
Sbjct: 163 LNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE 222
Query: 130 KRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPW 169
K+ ++ S+ AL+ IL +P RI + DI++D W
Sbjct: 223 KKTYLNPWKKIDSAPLALLHKILVENP-SARITIPDIKKDRW 263
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V+LA + + VA+KI+ +A +D + + +EI + K L H N+++F
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRA-VD-CPENIKKEICINKMLNHENVVKFYGHRR 74
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
+ Y+ +EY G L + I + + E A
Sbjct: 75 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 106
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 98/170 (57%), Gaps = 10/170 (5%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTD 66
++ + + ++LA+A+ YCH K V+HRDIK ENLLL +K++DFG +SV+
Sbjct: 109 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFG----WSVHAPS 164
Query: 67 YKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLK 126
+++ T CG+ Y PE+++G + ++ D+WS+GV+ + + G PF+ Y E +
Sbjct: 165 SRRD---TLCGTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGMPPFEAHTYQETYR 220
Query: 127 QVQKRVVFPESPRLSSSCKALISNILSP-VKFRIQMEDIRQDPWLKEDSN 175
++ RV F ++ + LIS +L R+ + ++ + PW+K +S+
Sbjct: 221 RIS-RVEFTFPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIKANSS 269
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V LA + +A+K++ K Q ++ L RE+E+ L+HPN++R
Sbjct: 23 GKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 82
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSN 302
RVY+I+EYA G++ ++K DE + +E++N
Sbjct: 83 DATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELAN 123
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 100/174 (57%), Gaps = 12/174 (6%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVN 63
L ++ + + ++LA+A+ YCH K V+HRDIK ENLLL +K++DFG +SV+
Sbjct: 101 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVH 156
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++ T CG+ Y PE+++G + ++ D+WS+GV+ + + G+ PF+ Y E
Sbjct: 157 APSSRRT---TLCGTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQE 212
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSN 175
K++ RV F ++ + LIS +L +P + R + ++ + PW+ +S+
Sbjct: 213 TYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWITANSS 264
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V LA + +A+K++ K Q ++ L RE+E+ L+HPN++R
Sbjct: 18 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 77
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSN 302
RVY+I+EYA G++ ++K DE + +E++N
Sbjct: 78 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 118
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 101/174 (58%), Gaps = 12/174 (6%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVN 63
L ++ + + ++LA+A+ YCH K V+HRDIK ENLLL +K++DFG +SV+
Sbjct: 103 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVH 158
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
+++ T CG+ Y PE+++G + ++ D+WS+GV+ + + G+ PF+ Y E
Sbjct: 159 APSSRRD---TLCGTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQE 214
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSN 175
K++ RV F ++ + LIS +L +P + R + ++ + PW+ +S+
Sbjct: 215 TYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWITANSS 266
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V LA + +A+K++ K Q ++ L RE+E+ L+HPN++R
Sbjct: 20 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 79
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSN 302
RVY+I+EYA G++ ++K DE + +E++N
Sbjct: 80 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 120
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 100/174 (57%), Gaps = 12/174 (6%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVN 63
L ++ + + ++LA+A+ YCH K V+HRDIK ENLLL +K++DFG +SV+
Sbjct: 105 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVH 160
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++ T CG+ Y PE+++G + ++ D+WS+GV+ + + G+ PF+ Y E
Sbjct: 161 APSSRRT---TLCGTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSN 175
K++ RV F ++ + LIS +L +P + R + ++ + PW+ +S+
Sbjct: 217 TYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWITANSS 268
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V LA + +A+K++ K Q ++ L RE+E+ L+HPN++R
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 81
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSN 302
RVY+I+EYA G++ ++K DE + +E++N
Sbjct: 82 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 122
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 100/174 (57%), Gaps = 12/174 (6%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVN 63
L ++ + + ++LA+A+ YCH K V+HRDIK ENLLL +K++DFG +SV+
Sbjct: 99 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVH 154
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++ T CG+ Y PE+++G + ++ D+WS+GV+ + + G+ PF+ Y E
Sbjct: 155 APSSRRT---TLCGTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQE 210
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSN 175
K++ RV F ++ + LIS +L +P + R + ++ + PW+ +S+
Sbjct: 211 TYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWITANSS 262
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V LA + +A+K++ K Q ++ L RE+E+ L+HPN++R
Sbjct: 16 GKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 75
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSN 302
RVY+I+EYA G++ ++K DE + +E++N
Sbjct: 76 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 116
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 100/174 (57%), Gaps = 12/174 (6%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVN 63
L ++ + + ++LA+A+ YCH K V+HRDIK ENLLL +K++DFG +SV+
Sbjct: 106 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVH 161
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++ T CG+ Y PE+++G + ++ D+WS+GV+ + + G+ PF+ Y E
Sbjct: 162 APSSRRT---TLCGTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQE 217
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSN 175
K++ RV F ++ + LIS +L +P + R + ++ + PW+ +S+
Sbjct: 218 TYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWITANSS 269
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V LA + +A+K++ K Q ++ L RE+E+ L+HPN++R
Sbjct: 23 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 82
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSN 302
RVY+I+EYA G++ ++K DE + +E++N
Sbjct: 83 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 123
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 100/174 (57%), Gaps = 12/174 (6%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVN 63
L ++ + + ++LA+A+ YCH K V+HRDIK ENLLL +K++DFG +SV+
Sbjct: 107 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVH 162
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++ T CG+ Y PE+++G + ++ D+WS+GV+ + + G+ PF+ Y E
Sbjct: 163 APSSRRT---TLCGTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQE 218
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSN 175
K++ RV F ++ + LIS +L +P + R + ++ + PW+ +S+
Sbjct: 219 TYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWITANSS 270
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V LA + +A+K++ K Q ++ L RE+E+ L+HPN++R
Sbjct: 24 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 83
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSN 302
RVY+I+EYA G + + ++K DE + +E++N
Sbjct: 84 DATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELAN 124
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 100/174 (57%), Gaps = 12/174 (6%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVN 63
L ++ + + ++LA+A+ YCH K V+HRDIK ENLLL +K++DFG +SV+
Sbjct: 107 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVH 162
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++ T CG+ Y PE+++G + ++ D+WS+GV+ + + G+ PF+ Y E
Sbjct: 163 APSSRRT---TLCGTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQE 218
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSN 175
K++ RV F ++ + LIS +L +P + R + ++ + PW+ +S+
Sbjct: 219 TYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWITANSS 270
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V LA + +A+K++ K Q ++ L RE+E+ L+HPN++R
Sbjct: 24 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 83
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSN 302
RVY+I+EYA G++ ++K DE + +E++N
Sbjct: 84 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 124
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 97/170 (57%), Gaps = 10/170 (5%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTD 66
++ + + ++LA+A+ YCH K V+HRDIK ENLLL +K++DFG +SV+
Sbjct: 109 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFG----WSVHAPS 164
Query: 67 YKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLK 126
++ T CG+ Y PE+++G + ++ D+WS+GV+ + + G PF+ Y E +
Sbjct: 165 SRRT---TLCGTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGMPPFEAHTYQETYR 220
Query: 127 QVQKRVVFPESPRLSSSCKALISNILSP-VKFRIQMEDIRQDPWLKEDSN 175
++ RV F ++ + LIS +L R+ + ++ + PW+K +S+
Sbjct: 221 RIS-RVEFTFPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIKANSS 269
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V LA + +A+K++ K Q ++ L RE+E+ L+HPN++R
Sbjct: 23 GKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 82
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSN 302
RVY+I+EYA G++ ++K DE + +E++N
Sbjct: 83 DATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELAN 123
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 100/174 (57%), Gaps = 12/174 (6%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVN 63
L ++ + + ++LA+A+ YCH K V+HRDIK ENLLL +K++DFG +SV+
Sbjct: 105 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVH 160
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++ T CG+ Y PE+++G + ++ D+WS+GV+ + + G+ PF+ Y E
Sbjct: 161 APSSRRT---TLCGTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSN 175
K++ RV F ++ + LIS +L +P + R + ++ + PW+ +S+
Sbjct: 217 TYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWITANSS 268
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V LA + +A+K++ K Q ++ L RE+E+ L+HPN++R
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 81
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSN 302
RVY+I+EYA G++ ++K DE + +E++N
Sbjct: 82 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 122
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 100/174 (57%), Gaps = 12/174 (6%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVN 63
L ++ + + ++LA+A+ YCH K V+HRDIK ENLLL +K++DFG +SV+
Sbjct: 102 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVH 157
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++ T CG+ Y PE+++G + ++ D+WS+GV+ + + G+ PF+ Y E
Sbjct: 158 APSSRRT---TLCGTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSN 175
K++ RV F ++ + LIS +L +P + R + ++ + PW+ +S+
Sbjct: 214 TYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWITANSS 265
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V LA + +A+K++ K Q ++ L RE+E+ L+HPN++R
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 78
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSN 302
RVY+I+EYA G++ ++K DE + +E++N
Sbjct: 79 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 100/174 (57%), Gaps = 12/174 (6%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVN 63
L ++ + + ++LA+A+ YCH K V+HRDIK ENLLL +K++DFG +SV+
Sbjct: 119 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVH 174
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++ T CG+ Y PE+++G + ++ D+WS+GV+ + + G+ PF+ Y E
Sbjct: 175 APSSRRT---TLCGTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQE 230
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSN 175
K++ RV F ++ + LIS +L +P + R + ++ + PW+ +S+
Sbjct: 231 TYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWITANSS 282
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 162 EDIRQDPWLKED---SNPVGKSKSAPEVGIHXXXXXXXXXXXXSSYATVKLATSARHSQD 218
E+ ++ W ED P+GK K + V LA +
Sbjct: 15 EESKKRQWALEDFEIGRPLGKGK----------------------FGNVYLAREKQSKFI 52
Query: 219 VAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSL 278
+A+K++ K Q ++ L RE+E+ L+HPN++R RVY+I+EYA G++
Sbjct: 53 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 112
Query: 279 LEVIRKERYIDEDKALLCYSEVSN 302
++K DE + +E++N
Sbjct: 113 YRELQKLSKFDEQRTATYITELAN 136
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 100/174 (57%), Gaps = 12/174 (6%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVN 63
L ++ + + ++LA+A+ YCH K V+HRDIK ENLLL +K++DFG +SV+
Sbjct: 128 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVH 183
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++ T CG+ Y PE+++G + ++ D+WS+GV+ + + G+ PF+ Y E
Sbjct: 184 APSSRRT---TLCGTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQE 239
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSN 175
K++ RV F ++ + LIS +L +P + R + ++ + PW+ +S+
Sbjct: 240 TYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWITANSS 291
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V LA + +A+K++ K Q ++ L RE+E+ L+HPN++R
Sbjct: 45 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 104
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSN 302
RVY+I+EYA G++ ++K DE + +E++N
Sbjct: 105 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 145
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 92/173 (53%), Gaps = 16/173 (9%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDK--YNIKLSDFGFARKYSVNN 64
++ D+AR +F QL + YCH V HRD+K EN LLD +K+ DFG++ K SV +
Sbjct: 111 FSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYS-KSSVLH 169
Query: 65 TDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSEL 124
+ K + G+ AY +PE+L Y + +D+WS GV L+ M+ G PF+D +
Sbjct: 170 SQPKSTV-----GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKN 224
Query: 125 LKQVQKRVV-----FPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWL 170
++ R++ P+ +S C+ LIS I P K RI + +IR W
Sbjct: 225 FRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAK-RISIPEIRNHEWF 276
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
++ +L + ++ VA+K I + + + + + REI + L+HPN++RF + I
Sbjct: 29 GNFGVARLMRDKQSNELVAVKYIERGEK----IDENVKREIINHRSLRHPNIVRFKEVIL 84
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSE-VSNLSQTFS-RCCYQD 314
T + I+MEYA G L E I ED+A + + +S +S + + C++D
Sbjct: 85 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRD 139
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 92/173 (53%), Gaps = 16/173 (9%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDK--YNIKLSDFGFARKYSVNN 64
++ D+AR +F QL + YCH V HRD+K EN LLD +K+ DFG++ K SV +
Sbjct: 112 FSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYS-KSSVLH 170
Query: 65 TDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSEL 124
+ K + G+ AY +PE+L Y + +D+WS GV L+ M+ G PF+D +
Sbjct: 171 SQPKSTV-----GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKN 225
Query: 125 LKQVQKRVV-----FPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWL 170
++ R++ P+ +S C+ LIS I P K RI + +IR W
Sbjct: 226 FRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAK-RISIPEIRNHEWF 277
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 59/115 (51%), Gaps = 6/115 (5%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
++ +L + ++ VA+K I + + + + REI + L+HPN++RF + I
Sbjct: 30 GNFGVARLMRDKQSNELVAVKYIERGEK----IAANVKREIINHRSLRHPNIVRFKEVIL 85
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSE-VSNLSQTFS-RCCYQD 314
T + I+MEYA G L E I ED+A + + +S +S + + C++D
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRD 140
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 99/174 (56%), Gaps = 12/174 (6%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVN 63
L ++ + + ++LA+A+ YCH K V+HRDIK ENLLL +K++DFG +SV+
Sbjct: 107 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVH 162
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++ T CG+ Y PE ++G + ++ D+WS+GV+ + + G+ PF+ Y E
Sbjct: 163 APSSRRT---TLCGTLDYLPPEXIEGRXHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQE 218
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSN 175
K++ RV F ++ + LIS +L +P + R + ++ + PW+ +S+
Sbjct: 219 TYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQ-RPXLREVLEHPWITANSS 270
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V LA + +A+K++ K Q ++ L RE+E+ L+HPN++R
Sbjct: 24 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 83
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSN 302
RVY+I+EYA G++ ++K DE + +E++N
Sbjct: 84 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 124
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 101/174 (58%), Gaps = 14/174 (8%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTD 66
++ ++ + +LADA+ YCH++ V+HRDIK ENLL+ K +K++DFG +SV+
Sbjct: 111 FDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG----WSVHAPS 166
Query: 67 YKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLK 126
++ CG+ Y PE+++G + ++ D+W GV+ + + G PFD +++E +
Sbjct: 167 LRRR---XMCGTLDYLPPEMIEGKTHD-EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHR 222
Query: 127 Q-VQKRVVFPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKEDSNPV 177
+ V + FP P LS K LIS +L P + R+ ++ + + PW+K +S V
Sbjct: 223 RIVNVDLKFP--PFLSDGSKDLISKLLRYHPPQ-RLPLKGVMEHPWVKANSRRV 273
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 54/101 (53%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V LA ++ +A+K++ K Q + ++ L REIE+ L+HPN++R
Sbjct: 25 GKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFH 84
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSN 302
R+Y+++E+A G L + ++K DE ++ E+++
Sbjct: 85 DRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELAD 125
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 101/174 (58%), Gaps = 14/174 (8%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTD 66
++ ++ + +LADA+ YCH++ V+HRDIK ENLL+ K +K++DFG +SV+
Sbjct: 111 FDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG----WSVHAPS 166
Query: 67 YKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLK 126
++ CG+ Y PE+++G + ++ D+W GV+ + + G PFD +++E +
Sbjct: 167 LRRR---XMCGTLDYLPPEMIEGKTHD-EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHR 222
Query: 127 Q-VQKRVVFPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKEDSNPV 177
+ V + FP P LS K LIS +L P + R+ ++ + + PW+K +S V
Sbjct: 223 RIVNVDLKFP--PFLSDGSKDLISKLLRYHPPQ-RLPLKGVMEHPWVKANSRRV 273
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 54/101 (53%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V LA ++ +A+K++ K Q + ++ L REIE+ L+HPN++R
Sbjct: 25 GKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFH 84
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSN 302
R+Y+++E+A G L + ++K DE ++ E+++
Sbjct: 85 DRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELAD 125
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 101/174 (58%), Gaps = 14/174 (8%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTD 66
++ ++ + +LADA+ YCH++ V+HRDIK ENLL+ K +K++DFG +SV+
Sbjct: 112 FDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG----WSVHAPS 167
Query: 67 YKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLK 126
++ CG+ Y PE+++G + ++ D+W GV+ + + G PFD +++E +
Sbjct: 168 LRRR---XMCGTLDYLPPEMIEGKTHD-EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHR 223
Query: 127 Q-VQKRVVFPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKEDSNPV 177
+ V + FP P LS K LIS +L P + R+ ++ + + PW+K +S V
Sbjct: 224 RIVNVDLKFP--PFLSDGSKDLISKLLRYHPPQ-RLPLKGVMEHPWVKANSRRV 274
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 54/101 (53%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V LA ++ +A+K++ K Q + ++ L REIE+ L+HPN++R
Sbjct: 26 GKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFH 85
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSN 302
R+Y+++E+A G L + ++K DE ++ E+++
Sbjct: 86 DRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELAD 126
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 87/161 (54%), Gaps = 14/161 (8%)
Query: 16 FSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETF 75
F QL A+ Y K ++HRDIK EN+++ + + IKL DFG A Y TF
Sbjct: 136 FRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFY------TF 189
Query: 76 CGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFP 135
CG+ Y +PE+L G PY + ++WS+GV L+ +V F++ + EL + V+ + P
Sbjct: 190 CGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV-----FEENPFCELEETVEAAIHPP 244
Query: 136 ESPRLSSSCKALISNILSPV-KFRIQMEDIRQDPWLKEDSN 175
+S +L+S +L PV + R +E + DPW+ + N
Sbjct: 245 Y--LVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVN 283
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 100/174 (57%), Gaps = 12/174 (6%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVN 63
L ++ + + ++LA+A+ YCH K V+HRDIK ENLLL +K+++FG +SV+
Sbjct: 105 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFG----WSVH 160
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++ T CG+ Y PE+++G + ++ D+WS+GV+ + + G+ PF+ Y E
Sbjct: 161 APSSRRT---TLCGTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSN 175
K++ RV F ++ + LIS +L +P + R + ++ + PW+ +S+
Sbjct: 217 TYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWITANSS 268
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V LA + +A+K++ K Q ++ L RE+E+ L+HPN++R
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 81
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSN 302
RVY+I+EYA G++ ++K DE + +E++N
Sbjct: 82 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 122
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 100/174 (57%), Gaps = 12/174 (6%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVN 63
L ++ + + ++LA+A+ YCH K V+HRDIK ENLLL +K+++FG +SV+
Sbjct: 104 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFG----WSVH 159
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++ T CG+ Y PE+++G + ++ D+WS+GV+ + + G+ PF+ Y E
Sbjct: 160 APSSRRT---TLCGTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQE 215
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSN 175
K++ RV F ++ + LIS +L +P + R + ++ + PW+ +S+
Sbjct: 216 TYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWITANSS 267
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V LA + +A+K++ K Q ++ L RE+E+ L+HPN++R
Sbjct: 21 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 80
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSN 302
RVY+I+EYA G++ ++K DE + +E++N
Sbjct: 81 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 121
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 89/147 (60%), Gaps = 9/147 (6%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTD 66
+ ++AR + +++ A++Y H + VV+RDIK ENL+LD +IK++DFG ++ +
Sbjct: 105 FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT 164
Query: 67 YKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLK 126
K TFCG+ Y +PE+L+ Y + D W +GVV++ M+ GRLPF + ++ L +
Sbjct: 165 MK-----TFCGTPEYLAPEVLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE 218
Query: 127 QV-QKRVVFPESPRLSSSCKALISNIL 152
+ + + FP + LS K+L++ +L
Sbjct: 219 LILMEEIRFPRT--LSPEAKSLLAGLL 243
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 241 EIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSE- 299
E V++ +HP L A +T R+ +MEYA G L + +ER E++A +E
Sbjct: 58 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEI 117
Query: 300 VSNLSQTFSR-CCYQD 314
VS L SR Y+D
Sbjct: 118 VSALEYLHSRDVVYRD 133
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 89/147 (60%), Gaps = 9/147 (6%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTD 66
+ ++AR + +++ A++Y H + VV+RDIK ENL+LD +IK++DFG ++ +
Sbjct: 102 FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT 161
Query: 67 YKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLK 126
K TFCG+ Y +PE+L+ Y + D W +GVV++ M+ GRLPF + ++ L +
Sbjct: 162 MK-----TFCGTPEYLAPEVLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE 215
Query: 127 QV-QKRVVFPESPRLSSSCKALISNIL 152
+ + + FP + LS K+L++ +L
Sbjct: 216 LILMEEIRFPRT--LSPEAKSLLAGLL 240
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 241 EIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSE- 299
E V++ +HP L A +T R+ +MEYA G L + +ER E++A +E
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEI 114
Query: 300 VSNLSQTFSR-CCYQD 314
VS L SR Y+D
Sbjct: 115 VSALEYLHSRDVVYRD 130
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 89/147 (60%), Gaps = 9/147 (6%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTD 66
+ ++AR + +++ A++Y H + VV+RDIK ENL+LD +IK++DFG ++ +
Sbjct: 102 FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT 161
Query: 67 YKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLK 126
K TFCG+ Y +PE+L+ Y + D W +GVV++ M+ GRLPF + ++ L +
Sbjct: 162 MK-----TFCGTPEYLAPEVLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE 215
Query: 127 QV-QKRVVFPESPRLSSSCKALISNIL 152
+ + + FP + LS K+L++ +L
Sbjct: 216 LILMEEIRFPRT--LSPEAKSLLAGLL 240
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 241 EIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSE- 299
E V++ +HP L A +T R+ +MEYA G L + +ER E++A +E
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEI 114
Query: 300 VSNLSQTFSR-CCYQD 314
VS L SR Y+D
Sbjct: 115 VSALEYLHSRDVVYRD 130
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 99/174 (56%), Gaps = 12/174 (6%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVN 63
L ++ + + ++LA+A+ YCH K V+HRDIK ENLLL +K++DFG +SV+
Sbjct: 102 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVH 157
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++ CG+ Y PE+++G + ++ D+WS+GV+ + + G+ PF+ Y E
Sbjct: 158 APSSRRT---XLCGTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSN 175
K++ RV F ++ + LIS +L +P + R + ++ + PW+ +S+
Sbjct: 214 TYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWITANSS 265
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V LA + +A+K++ K Q ++ L RE+E+ L+HPN++R
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 78
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSN 302
RVY+I+EYA G++ ++K DE + +E++N
Sbjct: 79 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 92/148 (62%), Gaps = 10/148 (6%)
Query: 7 YNTDKARRWFSQLADAIDYCH-KKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNT 65
++ D+AR + +++ A+DY H +K+VV+RD+K ENL+LD +IK++DFG ++ +
Sbjct: 245 FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA 304
Query: 66 DYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELL 125
K TFCG+ Y +PE+L+ Y + D W +GVV++ M+ GRLPF + ++ +L
Sbjct: 305 TMK-----TFCGTPEYLAPEVLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF 358
Query: 126 KQV-QKRVVFPESPRLSSSCKALISNIL 152
+ + + + FP + L K+L+S +L
Sbjct: 359 ELILMEEIRFPRT--LGPEAKSLLSGLL 384
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 241 EIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEV 300
E V++ +HP L + +T R+ +MEYA G L + +ER ED+A +E+
Sbjct: 198 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEI 257
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 92/148 (62%), Gaps = 10/148 (6%)
Query: 7 YNTDKARRWFSQLADAIDYCH-KKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNT 65
++ D+AR + +++ A+DY H +K+VV+RD+K ENL+LD +IK++DFG ++ +
Sbjct: 248 FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA 307
Query: 66 DYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELL 125
K TFCG+ Y +PE+L+ Y + D W +GVV++ M+ GRLPF + ++ +L
Sbjct: 308 TMK-----TFCGTPEYLAPEVLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF 361
Query: 126 KQV-QKRVVFPESPRLSSSCKALISNIL 152
+ + + + FP + L K+L+S +L
Sbjct: 362 ELILMEEIRFPRT--LGPEAKSLLSGLL 387
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 241 EIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEV 300
E V++ +HP L + +T R+ +MEYA G L + +ER ED+A +E+
Sbjct: 201 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEI 260
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 99/174 (56%), Gaps = 12/174 (6%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVN 63
L ++ + + ++LA+A+ YCH K V+HRDIK ENLLL +K++DFG +SV+
Sbjct: 102 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVH 157
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++ CG+ Y PE+++G + ++ D+WS+GV+ + + G+ PF+ Y E
Sbjct: 158 APSSRRA---ALCGTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSN 175
K++ RV F ++ + LIS +L +P + R + ++ + PW+ +S+
Sbjct: 214 TYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWITANSS 265
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V LA + +A+K++ K Q ++ L RE+E+ L+HPN++R
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 78
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSN 302
RVY+I+EYA G++ ++K DE + +E++N
Sbjct: 79 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 100/174 (57%), Gaps = 12/174 (6%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVN 63
L ++ + + ++LA+A+ YCH K V+HRDIK ENLLL +K++DFG +SV+
Sbjct: 105 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVH 160
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
+++ CG+ Y PE+++G + ++ D+WS+GV+ + + G+ PF+ Y E
Sbjct: 161 APSSRRD---DLCGTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSN 175
K++ RV F ++ + LIS +L +P + R + ++ + PW+ +S+
Sbjct: 217 TYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWITANSS 268
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V LA + +A+K++ K Q ++ L RE+E+ L+HPN++R
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 81
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSN 302
RVY+I+EYA G++ ++K DE + +E++N
Sbjct: 82 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 122
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 99/174 (56%), Gaps = 12/174 (6%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVN 63
L ++ + + ++LA+A+ YCH K V+HRDIK ENLLL +K++DFG +SV+
Sbjct: 102 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVH 157
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++ CG+ Y PE+++G + ++ D+WS+GV+ + + G+ PF+ Y E
Sbjct: 158 APSSRRT---ELCGTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSN 175
K++ RV F ++ + LIS +L +P + R + ++ + PW+ +S+
Sbjct: 214 TYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWITANSS 265
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V LA + +A+K++ K Q ++ L RE+E+ L+HPN++R
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 78
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSN 302
RVY+I+EYA G++ ++K DE + +E++N
Sbjct: 79 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 99/174 (56%), Gaps = 12/174 (6%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVN 63
L ++ + + ++LA+A+ YCH K V+HRDIK ENLLL +K++DFG +SV+
Sbjct: 105 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVH 160
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++ CG+ Y PE+++G + ++ D+WS+GV+ + + G+ PF+ Y E
Sbjct: 161 APSSRR---AALCGTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSN 175
K++ RV F ++ + LIS +L +P + R + ++ + PW+ +S+
Sbjct: 217 TYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWITANSS 268
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V LA + +A+K++ K Q ++ L RE+E+ L+HPN++R
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 81
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSN 302
RVY+I+EYA G++ ++K DE + +E++N
Sbjct: 82 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 122
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 99/174 (56%), Gaps = 12/174 (6%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVN 63
L ++ + + ++LA+A+ YCH K V+HRDIK ENLLL +K++DFG +SV+
Sbjct: 105 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVH 160
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++ CG+ Y PE+++G + ++ D+WS+GV+ + + G+ PF+ Y E
Sbjct: 161 APSSRRX---XLCGTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSN 175
K++ RV F ++ + LIS +L +P + R + ++ + PW+ +S+
Sbjct: 217 TYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWITANSS 268
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V LA + +A+K++ K Q ++ L RE+E+ L+HPN++R
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 81
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSN 302
RVY+I+EYA G++ ++K DE + +E++N
Sbjct: 82 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 122
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 98/175 (56%), Gaps = 14/175 (8%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFA-RKYSV 62
L ++ + + ++LA+A+ YCH K V+HRDIK ENLLL +K++DFG++ S
Sbjct: 107 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 166
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS 122
TD CG+ Y PE+++G + ++ D+WS+GV+ + + G+ PF+ Y
Sbjct: 167 RRTD--------LCGTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQ 217
Query: 123 ELLKQVQKRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSN 175
E K++ RV F ++ + LIS +L +P + R + ++ + PW+ +S+
Sbjct: 218 ETYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWITANSS 270
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V LA + +A+K++ K Q ++ L RE+E+ L+HPN++R
Sbjct: 24 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 83
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSN 302
RVY+I+EYA G++ ++K DE + +E++N
Sbjct: 84 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 124
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 99/174 (56%), Gaps = 12/174 (6%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVN 63
L ++ + + ++LA+A+ YCH K V+HRDIK ENLLL +K++DFG +SV+
Sbjct: 102 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVH 157
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++ CG+ Y PE+++G + ++ D+WS+GV+ + + G+ PF+ Y E
Sbjct: 158 APSSRRT---DLCGTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSN 175
K++ RV F ++ + LIS +L +P + R + ++ + PW+ +S+
Sbjct: 214 TYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWITANSS 265
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V LA + +A+K++ K Q ++ L RE+E+ L+HPN++R
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 78
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSN 302
RVY+I+EYA G++ ++K DE + +E++N
Sbjct: 79 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 99/174 (56%), Gaps = 12/174 (6%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVN 63
L ++ + + ++LA+A+ YCH K V+HRDIK ENLLL +K++DFG +SV+
Sbjct: 102 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVH 157
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++ CG+ Y PE+++G + ++ D+WS+GV+ + + G+ PF+ Y E
Sbjct: 158 APSSRRX---XLCGTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSN 175
K++ RV F ++ + LIS +L +P + R + ++ + PW+ +S+
Sbjct: 214 TYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWITANSS 265
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V LA + +A+K++ K Q ++ L RE+E+ L+HPN++R
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 78
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSN 302
RVY+I+EYA G++ ++K DE + +E++N
Sbjct: 79 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 100/174 (57%), Gaps = 12/174 (6%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVN 63
L ++ + + ++LA+A+ YCH K V+HRDIK ENLLL +K++DFG +SV+
Sbjct: 128 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVH 183
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
+++ CG+ Y PE+++G + ++ D+WS+GV+ + + G+ PF+ Y E
Sbjct: 184 APSSRRD---DLCGTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQE 239
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSN 175
K++ RV F ++ + LIS +L +P + R + ++ + PW+ +S+
Sbjct: 240 TYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWITANSS 291
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V LA + +A+K++ K Q ++ L RE+E+ L+HPN++R
Sbjct: 45 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 104
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSN 302
RVY+I+EYA G++ ++K DE + +E++N
Sbjct: 105 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 145
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 99/174 (56%), Gaps = 12/174 (6%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVN 63
L ++ + + ++LA+A+ YCH K V+HRDIK ENLLL +K++DFG +SV+
Sbjct: 104 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVH 159
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++ CG+ Y PE+++G + ++ D+WS+GV+ + + G+ PF+ Y E
Sbjct: 160 APSSRRX---XLCGTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQE 215
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSN 175
K++ RV F ++ + LIS +L +P + R + ++ + PW+ +S+
Sbjct: 216 TYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWITANSS 267
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V LA + +A+K++ K Q ++ L RE+E+ L+HPN++R
Sbjct: 21 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 80
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSN 302
RVY+I+EYA G++ ++K DE + +E++N
Sbjct: 81 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 121
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 99/174 (56%), Gaps = 12/174 (6%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVN 63
L ++ + + ++LA+A+ YCH K V+HRDIK ENLLL +K++DFG +SV+
Sbjct: 103 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVH 158
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++ CG+ Y PE+++G + ++ D+WS+GV+ + + G+ PF+ Y E
Sbjct: 159 APSSRRT---DLCGTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQE 214
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSN 175
K++ RV F ++ + LIS +L +P + R + ++ + PW+ +S+
Sbjct: 215 TYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWITANSS 266
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V LA + +A+K++ K Q ++ L RE+E+ L+HPN++R
Sbjct: 20 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 79
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSN 302
RVY+I+EYA G++ ++K DE + +E++N
Sbjct: 80 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 120
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 98/175 (56%), Gaps = 14/175 (8%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFA-RKYSV 62
L ++ + + ++LA+A+ YCH K V+HRDIK ENLLL +K++DFG++ S
Sbjct: 102 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 161
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS 122
TD CG+ Y PE+++G + ++ D+WS+GV+ + + G+ PF+ Y
Sbjct: 162 RRTD--------LCGTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
Query: 123 ELLKQVQKRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSN 175
E K++ RV F ++ + LIS +L +P + R + ++ + PW+ +S+
Sbjct: 213 ETYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWITANSS 265
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V LA + +A+K++ K Q ++ L RE+E+ L+HPN++R
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 78
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSN 302
RVY+I+EYA G++ ++K DE + +E++N
Sbjct: 79 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 92/173 (53%), Gaps = 16/173 (9%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKY--NIKLSDFGFARKYSVNN 64
++ D+AR +F QL + Y H V HRD+K EN LLD +K++DFG++ K SV +
Sbjct: 112 FSEDEARFFFQQLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYS-KASVLH 170
Query: 65 TDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSEL 124
+ K + G+ AY +PE+L Y + +D+WS GV L+ M+ G PF+D +
Sbjct: 171 SQPK-----SAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKN 225
Query: 125 LKQVQKRVV-----FPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWL 170
++ R++ P+ +S C+ LIS I P K RI + +IR W
Sbjct: 226 FRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAK-RISIPEIRNHEWF 277
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
++ +L + ++ VA+K I + + + +K REI + L+HPN++RF + I
Sbjct: 30 GNFGVARLMRDKQANELVAVKYIERGEKIDENVK----REIINHRSLRHPNIVRFKEVIL 85
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEV 300
T + I+MEYA G L E I ED+A + ++
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL 124
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 91/173 (52%), Gaps = 16/173 (9%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDK--YNIKLSDFGFARKYSVNN 64
++ D+AR +F QL + YCH V HRD+K EN LLD +K+ FG++ K SV +
Sbjct: 112 FSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYS-KSSVLH 170
Query: 65 TDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSEL 124
+ K + G+ AY +PE+L Y + +D+WS GV L+ M+ G PF+D +
Sbjct: 171 SQPKSTV-----GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKN 225
Query: 125 LKQVQKRVV-----FPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWL 170
++ R++ P+ +S C+ LIS I P K RI + +IR W
Sbjct: 226 FRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAK-RISIPEIRNHEWF 277
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
++ +L + ++ VA+K I + + + + + REI + L+HPN++RF + I
Sbjct: 30 GNFGVARLMRDKQSNELVAVKYIERGEK----IDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSE-VSNLSQTFS-RCCYQD 314
T + I+MEYA G L E I ED+A + + +S +S + + C++D
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRD 140
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 99/174 (56%), Gaps = 12/174 (6%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVN 63
L ++ + + ++LA+A+ YCH K V+HRDIK ENLLL +K++DFG +SV+
Sbjct: 102 LSKFDEQRTATYITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFG----WSVH 157
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++ CG+ Y PE+++G + ++ D+WS+GV+ + + G+ PF+ Y +
Sbjct: 158 APSSRR---AALCGTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQD 213
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSN 175
K++ RV F ++ + LIS +L +P + R + ++ + PW+ +S+
Sbjct: 214 TYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWITANSS 265
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V LA +A+K++ K Q ++ L RE+E+ L+HPN++R
Sbjct: 19 GKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 78
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSN 302
+ RVY+I+EYA G++ ++K DE + +E++N
Sbjct: 79 DSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 91/173 (52%), Gaps = 16/173 (9%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDK--YNIKLSDFGFARKYSVNN 64
++ D+AR +F QL + YCH V HRD+K EN LLD +K+ FG++ K SV +
Sbjct: 112 FSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYS-KSSVLH 170
Query: 65 TDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSEL 124
+ K + G+ AY +PE+L Y + +D+WS GV L+ M+ G PF+D +
Sbjct: 171 SQPKDTV-----GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKN 225
Query: 125 LKQVQKRVV-----FPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWL 170
++ R++ P+ +S C+ LIS I P K RI + +IR W
Sbjct: 226 FRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAK-RISIPEIRNHEWF 277
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
++ +L + ++ VA+K I + + + + + REI + L+HPN++RF + I
Sbjct: 30 GNFGVARLMRDKQSNELVAVKYIERGEK----IDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSE-VSNLSQTFS-RCCYQD 314
T + I+MEYA G L E I ED+A + + +S +S + + C++D
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRD 140
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTD 66
+ ++AR + +++ A++Y H + VV+RDIK ENL+LD +IK++DFG ++ +
Sbjct: 102 FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT 161
Query: 67 YKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLK 126
K FCG+ Y +PE+L+ Y + D W +GVV++ M+ GRLPF + ++ L +
Sbjct: 162 MK-----XFCGTPEYLAPEVLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE 215
Query: 127 QV-QKRVVFPESPRLSSSCKALISNIL 152
+ + + FP + LS K+L++ +L
Sbjct: 216 LILMEEIRFPRT--LSPEAKSLLAGLL 240
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 241 EIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSE- 299
E V++ +HP L A +T R+ +MEYA G L + +ER E++A +E
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEI 114
Query: 300 VSNLSQTFSR-CCYQD 314
VS L SR Y+D
Sbjct: 115 VSALEYLHSRDVVYRD 130
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTD 66
+ ++AR + +++ A++Y H + VV+RDIK ENL+LD +IK++DFG ++ +
Sbjct: 102 FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT 161
Query: 67 YKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLK 126
K FCG+ Y +PE+L+ Y + D W +GVV++ M+ GRLPF + ++ L +
Sbjct: 162 MK-----XFCGTPEYLAPEVLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE 215
Query: 127 QV-QKRVVFPESPRLSSSCKALISNIL 152
+ + + FP + LS K+L++ +L
Sbjct: 216 LILMEEIRFPRT--LSPEAKSLLAGLL 240
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 241 EIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSE- 299
E V++ +HP L A +T R+ +MEYA G L + +ER E++A +E
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEI 114
Query: 300 VSNLSQTFSR-CCYQD 314
VS L SR Y+D
Sbjct: 115 VSALEYLHSRDVVYRD 130
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTD 66
+ ++AR + +++ A++Y H + VV+RDIK ENL+LD +IK++DFG ++ +
Sbjct: 102 FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT 161
Query: 67 YKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLK 126
K FCG+ Y +PE+L+ Y + D W +GVV++ M+ GRLPF + ++ L +
Sbjct: 162 MK-----XFCGTPEYLAPEVLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE 215
Query: 127 QV-QKRVVFPESPRLSSSCKALISNIL 152
+ + + FP + LS K+L++ +L
Sbjct: 216 LILMEEIRFPRT--LSPEAKSLLAGLL 240
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 241 EIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSE- 299
E V++ +HP L A +T R+ +MEYA G L + +ER E++A +E
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEI 114
Query: 300 VSNLSQTFSR-CCYQD 314
VS L SR Y+D
Sbjct: 115 VSALEYLHSRDVVYRD 130
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTD 66
+ ++AR + +++ A++Y H + VV+RDIK ENL+LD +IK++DFG ++ +
Sbjct: 107 FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT 166
Query: 67 YKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLK 126
K FCG+ Y +PE+L+ Y + D W +GVV++ M+ GRLPF + ++ L +
Sbjct: 167 MK-----XFCGTPEYLAPEVLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE 220
Query: 127 QV-QKRVVFPESPRLSSSCKALISNIL 152
+ + + FP + LS K+L++ +L
Sbjct: 221 LILMEEIRFPRT--LSPEAKSLLAGLL 245
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 241 EIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSE- 299
E V++ +HP L A +T R+ +MEYA G L + +ER E++A +E
Sbjct: 60 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEI 119
Query: 300 VSNLSQTFSR-CCYQD 314
VS L SR Y+D
Sbjct: 120 VSALEYLHSRDVVYRD 135
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 92/172 (53%), Gaps = 14/172 (8%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDK--YNIKLSDFGFARKYSVNN 64
++ D+AR +F QL + YCH + HRD+K EN LLD +K+ DFG++ K SV +
Sbjct: 113 FSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYS-KSSVLH 171
Query: 65 TDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSEL 124
+ K + G+ AY +PE+L Y + +D+WS GV L+ M+ G PF+D
Sbjct: 172 SQPKSTV-----GTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD 226
Query: 125 LKQVQKRVV-----FPESPRLSSSCKALISNI-LSPVKFRIQMEDIRQDPWL 170
++ +R++ P+ R+S C LIS I ++ RI + +I+ W
Sbjct: 227 YRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWF 278
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
++ +L + VA+K I + A + + + REI + L+HPN++RF + I
Sbjct: 31 GNFGVARLMRDKLTKELVAVKYIERGAA----IDENVQREIINHRSLRHPNIVRFKEVIL 86
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSE-VSNLSQTFS-RCCYQD 314
T + IIMEYA G L E I ED+A + + +S +S S + C++D
Sbjct: 87 TPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRD 141
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 91/148 (61%), Gaps = 10/148 (6%)
Query: 7 YNTDKARRWFSQLADAIDYCH-KKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNT 65
++ D+AR + +++ A+DY H +K+VV+RD+K ENL+LD +IK++DFG ++ +
Sbjct: 106 FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA 165
Query: 66 DYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELL 125
K FCG+ Y +PE+L+ Y + D W +GVV++ M+ GRLPF + ++ +L
Sbjct: 166 TMK-----XFCGTPEYLAPEVLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF 219
Query: 126 KQV-QKRVVFPESPRLSSSCKALISNIL 152
+ + + + FP + L K+L+S +L
Sbjct: 220 ELILMEEIRFPRT--LGPEAKSLLSGLL 245
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 241 EIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEV 300
E V++ +HP L + +T R+ +MEYA G L + +ER ED+A +E+
Sbjct: 59 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEI 118
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 91/148 (61%), Gaps = 10/148 (6%)
Query: 7 YNTDKARRWFSQLADAIDYCH-KKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNT 65
++ D+AR + +++ A+DY H +K+VV+RD+K ENL+LD +IK++DFG ++ +
Sbjct: 107 FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA 166
Query: 66 DYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELL 125
K FCG+ Y +PE+L+ Y + D W +GVV++ M+ GRLPF + ++ +L
Sbjct: 167 TMK-----XFCGTPEYLAPEVLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF 220
Query: 126 KQV-QKRVVFPESPRLSSSCKALISNIL 152
+ + + + FP + L K+L+S +L
Sbjct: 221 ELILMEEIRFPRT--LGPEAKSLLSGLL 246
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 241 EIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEV 300
E V++ +HP L + +T R+ +MEYA G L + +ER ED+A +E+
Sbjct: 60 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEI 119
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 91/148 (61%), Gaps = 10/148 (6%)
Query: 7 YNTDKARRWFSQLADAIDYCH-KKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNT 65
++ D+AR + +++ A+DY H +K+VV+RD+K ENL+LD +IK++DFG ++ +
Sbjct: 105 FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA 164
Query: 66 DYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELL 125
K FCG+ Y +PE+L+ Y + D W +GVV++ M+ GRLPF + ++ +L
Sbjct: 165 TMK-----XFCGTPEYLAPEVLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF 218
Query: 126 KQV-QKRVVFPESPRLSSSCKALISNIL 152
+ + + + FP + L K+L+S +L
Sbjct: 219 ELILMEEIRFPRT--LGPEAKSLLSGLL 244
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 241 EIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEV 300
E V++ +HP L + +T R+ +MEYA G L + +ER ED+A +E+
Sbjct: 58 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEI 117
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 101/181 (55%), Gaps = 12/181 (6%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVN 63
L ++ + + ++LA+A+ YCH K V+HRDIK ENLLL +K++DFG +S +
Sbjct: 103 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSCH 158
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++ T G+ Y PE+++G + ++ D+WS+GV+ + + G+ PF+ Y E
Sbjct: 159 APSSRRT---TLSGTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQE 214
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSNPVGKSK 181
K++ RV F ++ + LIS +L +P + R + ++ + PW+ +S+ S+
Sbjct: 215 TYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWITANSSKPSNSQ 272
Query: 182 S 182
+
Sbjct: 273 N 273
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V LA + +A+K++ K Q ++ L RE+E+ L+HPN++R
Sbjct: 20 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 79
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSN 302
RVY+I+EYA G++ ++K DE + +E++N
Sbjct: 80 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 120
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 98/174 (56%), Gaps = 12/174 (6%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVN 63
L ++ + + ++LA+A+ YCH K V+HRDIK ENLLL +K++DFG +SV+
Sbjct: 107 LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVH 162
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++ G+ Y PE+++G + ++ D+WS+GV+ + + G+ PF+ Y E
Sbjct: 163 APSSRRX---XLXGTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQE 218
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSN 175
K++ RV F ++ + LIS +L +P + R + ++ + PW+ +S+
Sbjct: 219 TYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWITANSS 270
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V LA + +A+K++ K Q ++ L RE+E+ L+HPN++R
Sbjct: 24 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 83
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSN 302
RVY+I+EYA G + + ++K DE + +E++N
Sbjct: 84 DATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELAN 124
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 93/165 (56%), Gaps = 9/165 (5%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQ 69
D+AR +F L I+Y H + ++HRDIK NLL+ + +IK++DFG + ++ ++
Sbjct: 137 DQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA---- 192
Query: 70 NLSETFCGSYAYASPEILKGVP--YTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQ 127
L G+ A+ +PE L ++ + D+W+MGV L+ V+G+ PF D L +
Sbjct: 193 -LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSK 251
Query: 128 VQKRVV-FPESPRLSSSCKALISNILSP-VKFRIQMEDIRQDPWL 170
++ + + FP+ P ++ K LI+ +L + RI + +I+ PW+
Sbjct: 252 IKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 48/109 (44%), Gaps = 33/109 (30%)
Query: 202 SSYATVKLATSARHSQDVAIKIISK---------------------------VQAPIDYL 234
SY VKLA + + A+K++SK + PI+ +
Sbjct: 24 GSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQV 83
Query: 235 KKFLPREIEVVKGLKHPNLIRFLQAIETTHR--VYIIMEYAKNGSLLEV 281
+EI ++K L HPN+++ ++ ++ + +Y++ E G ++EV
Sbjct: 84 Y----QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV 128
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 93/176 (52%), Gaps = 16/176 (9%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLL---DDKYNIKLSDFGFARKYSVN 63
Y A Q+ DA+ Y H+ +VHRD+K ENLL D++ I +SDFG ++
Sbjct: 117 YTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSK----- 171
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
+ K ++ T CG+ Y +PE+L PY+ + D WS+GV+ + ++ G PF D N S+
Sbjct: 172 -MEGKGDVMSTACGTPGYVAPEVLAQKPYS-KAVDCWSIGVIAYILLCGYPPFYDENDSK 229
Query: 124 LLKQVQKRVVFPESP---RLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKEDS 174
L +Q+ K +SP +S S K I N++ P K R E + PW+ D+
Sbjct: 230 LFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNK-RYTCEQAARHPWIAGDT 284
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+++ V LA + A+K I K + + + EI V++ +KH N++ E
Sbjct: 33 GAFSEVVLAEEKATGKLFAVKCIPK--KALKGKESSIENEIAVLRKIKHENIVALEDIYE 90
Query: 262 TTHRVYIIMEYAKNGSLLE-VIRKERYIDEDKALL 295
+ + +Y++M+ G L + ++ K Y ++D + L
Sbjct: 91 SPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTL 125
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 92/176 (52%), Gaps = 16/176 (9%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLL---LDDKYNIKLSDFGFARKYSVN 63
Y A R Q+ DA+ Y H +VHRD+K ENLL LD+ I +SDFG ++
Sbjct: 113 YTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---- 168
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
D LS T CG+ Y +PE+L PY+ + D WS+GV+ + ++ G PF D N ++
Sbjct: 169 -EDPGSVLS-TACGTPGYVAPEVLAQKPYS-KAVDCWSIGVIAYILLCGYPPFYDENDAK 225
Query: 124 LLKQVQKRVVFPESP---RLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKEDS 174
L +Q+ K +SP +S S K I +++ P K R E Q PW+ D+
Sbjct: 226 LFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEK-RFTCEQALQHPWIAGDT 280
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+++ V LA R + VAIK I+K ++ + + EI V+ +KHPN++ E
Sbjct: 29 GAFSEVILAEDKRTQKLVAIKCIAK--EALEGKEGSMENEIAVLHKIKHPNIVALDDIYE 86
Query: 262 TTHRVYIIMEYAKNGSLLE-VIRKERYIDEDKALLCY 297
+ +Y+IM+ G L + ++ K Y + D + L +
Sbjct: 87 SGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF 123
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 92/176 (52%), Gaps = 16/176 (9%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLL---LDDKYNIKLSDFGFARKYSVN 63
Y A R Q+ DA+ Y H +VHRD+K ENLL LD+ I +SDFG ++
Sbjct: 113 YTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---- 168
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
D LS T CG+ Y +PE+L PY+ + D WS+GV+ + ++ G PF D N ++
Sbjct: 169 -EDPGSVLS-TACGTPGYVAPEVLAQKPYS-KAVDCWSIGVIAYILLCGYPPFYDENDAK 225
Query: 124 LLKQVQKRVVFPESP---RLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKEDS 174
L +Q+ K +SP +S S K I +++ P K R E Q PW+ D+
Sbjct: 226 LFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEK-RFTCEQALQHPWIAGDT 280
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+++ V LA R + VAIK I+K ++ + + EI V+ +KHPN++ E
Sbjct: 29 GAFSEVILAEDKRTQKLVAIKCIAK--EALEGKEGSMENEIAVLHKIKHPNIVALDDIYE 86
Query: 262 TTHRVYIIMEYAKNGSLLE-VIRKERYIDEDKALLCY 297
+ +Y+IM+ G L + ++ K Y + D + L +
Sbjct: 87 SGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF 123
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 92/176 (52%), Gaps = 16/176 (9%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLL---LDDKYNIKLSDFGFARKYSVN 63
Y A R Q+ DA+ Y H +VHRD+K ENLL LD+ I +SDFG ++
Sbjct: 113 YTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK----- 167
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
+ ++ T CG+ Y +PE+L PY+ + D WS+GV+ + ++ G PF D N ++
Sbjct: 168 -MEDPGSVLSTACGTPGYVAPEVLAQKPYS-KAVDCWSIGVIAYILLCGYPPFYDENDAK 225
Query: 124 LLKQVQKRVVFPESP---RLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKEDS 174
L +Q+ K +SP +S S K I +++ P K R E Q PW+ D+
Sbjct: 226 LFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEK-RFTCEQALQHPWIAGDT 280
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+++ V LA R + VAIK I+K ++ + + EI V+ +KHPN++ E
Sbjct: 29 GAFSEVILAEDKRTQKLVAIKCIAK--KALEGKEGSMENEIAVLHKIKHPNIVALDDIYE 86
Query: 262 TTHRVYIIMEYAKNGSLLE-VIRKERYIDEDKALLCY 297
+ +Y+IM+ G L + ++ K Y + D + L +
Sbjct: 87 SGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF 123
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 92/176 (52%), Gaps = 16/176 (9%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLL---LDDKYNIKLSDFGFARKYSVN 63
Y A R Q+ DA+ Y H +VHRD+K ENLL LD+ I +SDFG ++
Sbjct: 113 YTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK----- 167
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
+ ++ T CG+ Y +PE+L PY+ + D WS+GV+ + ++ G PF D N ++
Sbjct: 168 -MEDPGSVLSTACGTPGYVAPEVLAQKPYS-KAVDCWSIGVIAYILLCGYPPFYDENDAK 225
Query: 124 LLKQVQKRVVFPESP---RLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKEDS 174
L +Q+ K +SP +S S K I +++ P K R E Q PW+ D+
Sbjct: 226 LFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEK-RFTCEQALQHPWIAGDT 280
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+++ V LA R + VAIK I+K ++ + + EI V+ +KHPN++ E
Sbjct: 29 GAFSEVILAEDKRTQKLVAIKCIAK--EALEGKEGSMENEIAVLHKIKHPNIVALDDIYE 86
Query: 262 TTHRVYIIMEYAKNGSLLE-VIRKERYIDEDKALLCY 297
+ +Y+IM+ G L + ++ K Y + D + L +
Sbjct: 87 SGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF 123
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 93/168 (55%), Gaps = 18/168 (10%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
A+ + +++ A++Y H K +++RD+K EN+LLD +IK++DFGFA+ Y ++
Sbjct: 108 AKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAK--------YVPDV 159
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV-QK 130
+ CG+ Y +PE++ PY + D WS G++++ M+ G PF D+N + +++
Sbjct: 160 TYXLCGTPDYIAPEVVSTKPYN-KSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA 218
Query: 131 RVVFPESPRLSSSCKALISNILSP------VKFRIQMEDIRQDPWLKE 172
+ FP P + K L+S +++ + ED++ PW KE
Sbjct: 219 ELRFP--PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE 264
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 250 HPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEV 300
HP +IR + ++++IM+Y + G L ++RK + A +EV
Sbjct: 65 HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEV 115
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 84/142 (59%), Gaps = 7/142 (4%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
+AR + +++A A+ Y H ++V+RD+K EN+LLD + +I L+DFG ++ +N+
Sbjct: 140 RARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNST---- 195
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQK 130
+ TFCG+ Y +PE+L PY + D W +G VL+ M+YG PF N +E+ +
Sbjct: 196 -TSTFCGTPEYLAPEVLHKQPYD-RTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN 253
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+ + P +++S + L+ +L
Sbjct: 254 KPL-QLKPNITNSARHLLEGLL 274
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVV-KGLKHPNLIRFLQAI 260
S+ V LA A+K++ K +K + E V+ K +KHP L+ +
Sbjct: 49 GSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSF 108
Query: 261 ETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSN 302
+T ++Y +++Y G L +++ER E +A +E+++
Sbjct: 109 QTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIAS 150
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 88/145 (60%), Gaps = 9/145 (6%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTD 66
+ + + + ++LA A+D+ H +++RD+K EN+LLD++ +IKL+DFG +++ + D
Sbjct: 124 FTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE----SID 179
Query: 67 YKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLK 126
+++ + +FCG+ Y +PE++ +T Q +D WS GV++F M+ G LPF + E +
Sbjct: 180 HEKK-AYSFCGTVEYMAPEVVNRRGHT-QSADWWSFGVLMFEMLTGTLPFQGKDRKETMT 237
Query: 127 QVQK-RVVFPE--SPRLSSSCKALI 148
+ K ++ P+ SP S + L
Sbjct: 238 MILKAKLGMPQFLSPEAQSLLRMLF 262
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 207 VKLATSARHSQDVAIKIISKVQAPI-DYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHR 265
VK + + Q A+K++ K + D ++ + R+I V + HP +++ A +T +
Sbjct: 44 VKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE--VNHPFIVKLHYAFQTEGK 101
Query: 266 VYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVS 301
+Y+I+++ + G L + KE E+ +E++
Sbjct: 102 LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELA 137
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 88/145 (60%), Gaps = 9/145 (6%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTD 66
+ + + + ++LA A+D+ H +++RD+K EN+LLD++ +IKL+DFG +++ + D
Sbjct: 123 FTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE----SID 178
Query: 67 YKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLK 126
+++ + +FCG+ Y +PE++ +T Q +D WS GV++F M+ G LPF + E +
Sbjct: 179 HEKK-AYSFCGTVEYMAPEVVNRRGHT-QSADWWSFGVLMFEMLTGTLPFQGKDRKETMT 236
Query: 127 QVQK-RVVFPE--SPRLSSSCKALI 148
+ K ++ P+ SP S + L
Sbjct: 237 MILKAKLGMPQFLSPEAQSLLRMLF 261
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 207 VKLATSARHSQDVAIKIISKVQAPI-DYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHR 265
VK + + Q A+K++ K + D ++ + R+I V + HP +++ A +T +
Sbjct: 43 VKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE--VNHPFIVKLHYAFQTEGK 100
Query: 266 VYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVS 301
+Y+I+++ + G L + KE E+ +E++
Sbjct: 101 LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELA 136
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 92/172 (53%), Gaps = 16/172 (9%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVN 63
Y+ A Q+ ++I YCH +VHR++K ENLLL K +KL+DFG A VN
Sbjct: 102 YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVN 159
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
+++ F G+ Y SPE+LK PY+ + DIW+ GV+L+ ++ G PF D +
Sbjct: 160 DSEAWHG----FAGTPGYLSPEVLKKDPYS-KPVDIWACGVILYILLVGYPPFWDEDQHR 214
Query: 124 LLKQVQKRVV---FPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWL 170
L Q++ PE ++ K+LI ++L+ P K RI + + PW+
Sbjct: 215 LYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKK-RITADQALKVPWI 265
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 202 SSYATVKLATSARHSQDVAIKII-SKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAI 260
+++ V+ + A KII +K + D+ K L RE + + L+HPN++R +I
Sbjct: 17 GAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK--LEREARICRKLQHPNIVRLHDSI 74
Query: 261 ETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEV 300
+ Y++ + G L E I + E A C ++
Sbjct: 75 QEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI 114
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 91/171 (53%), Gaps = 14/171 (8%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVN 63
Y+ A Q+ ++I YCH +VHR++K ENLLL K +KL+DFG A VN
Sbjct: 125 YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVN 182
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
+++ F G+ Y SPE+LK PY+ + DIW+ GV+L+ ++ G PF D +
Sbjct: 183 DSEAWHG----FAGTPGYLSPEVLKKDPYS-KPVDIWACGVILYILLVGYPPFWDEDQHR 237
Query: 124 LLKQVQKRVV---FPESPRLSSSCKALISNILS-PVKFRIQMEDIRQDPWL 170
L Q++ PE ++ K+LI ++L+ K RI + + PW+
Sbjct: 238 LYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 288
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 202 SSYATVKLATSARHSQDVAIKII-SKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAI 260
+++ V+ + A KII +K + D+ K L RE + + L+HPN++R +I
Sbjct: 40 GAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK--LEREARICRKLQHPNIVRLHDSI 97
Query: 261 ETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEV 300
+ Y++ + G L E I + E A C ++
Sbjct: 98 QEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI 137
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 92/172 (53%), Gaps = 16/172 (9%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVN 63
Y+ A Q+ ++I YCH +VHR++K ENLLL K +KL+DFG A VN
Sbjct: 102 YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVN 159
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
+++ F G+ Y SPE+LK PY+ + DIW+ GV+L+ ++ G PF D +
Sbjct: 160 DSEAWHG----FAGTPGYLSPEVLKKDPYS-KPVDIWACGVILYILLVGYPPFWDEDQHR 214
Query: 124 LLKQVQKRVV---FPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWL 170
L Q++ PE ++ K+LI ++L+ P K RI + + PW+
Sbjct: 215 LYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKK-RITADQALKVPWI 265
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 202 SSYATVKLATSARHSQDVAIKII-SKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAI 260
+++ V+ + A KII +K + D+ K L RE + + L+HPN++R +I
Sbjct: 17 GAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK--LEREARICRKLQHPNIVRLHDSI 74
Query: 261 ETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEV 300
+ Y++ + G L E I + E A C ++
Sbjct: 75 QEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI 114
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 92/172 (53%), Gaps = 16/172 (9%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVN 63
Y+ A Q+ ++I YCH +VHR++K ENLLL K +KL+DFG A VN
Sbjct: 101 YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVN 158
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
+++ F G+ Y SPE+LK PY+ + DIW+ GV+L+ ++ G PF D +
Sbjct: 159 DSEAWHG----FAGTPGYLSPEVLKKDPYS-KPVDIWACGVILYILLVGYPPFWDEDQHR 213
Query: 124 LLKQVQKRVV---FPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWL 170
L Q++ PE ++ K+LI ++L+ P K RI + + PW+
Sbjct: 214 LYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKK-RITADQALKVPWI 264
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 202 SSYATVKLATSARHSQDVAIKII-SKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAI 260
+++ V+ + A KII +K + D+ K L RE + + L+HPN++R +I
Sbjct: 16 GAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK--LEREARICRKLQHPNIVRLHDSI 73
Query: 261 ETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEV 300
+ Y++ + G L E I + E A C ++
Sbjct: 74 QEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI 113
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 88/145 (60%), Gaps = 9/145 (6%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTD 66
+ + + + ++LA A+D+ H +++RD+K EN+LLD++ +IKL+DFG +++ + D
Sbjct: 123 FTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE----SID 178
Query: 67 YKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLK 126
+++ + +FCG+ Y +PE++ +T Q +D WS GV++F M+ G LPF + E +
Sbjct: 179 HEKK-AYSFCGTVEYMAPEVVNRRGHT-QSADWWSFGVLMFEMLTGTLPFQGKDRKETMT 236
Query: 127 QVQK-RVVFPE--SPRLSSSCKALI 148
+ K ++ P+ SP S + L
Sbjct: 237 MILKAKLGMPQFLSPEAQSLLRMLF 261
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 207 VKLATSARHSQDVAIKIISKVQAPI-DYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHR 265
VK + + Q A+K++ K + D ++ + R+I V + HP +++ A +T +
Sbjct: 43 VKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE--VNHPFIVKLHYAFQTEGK 100
Query: 266 VYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVS 301
+Y+I+++ + G L + KE E+ +E++
Sbjct: 101 LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELA 136
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 98/192 (51%), Gaps = 25/192 (13%)
Query: 4 LLDYNTDKA-------RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNI-KLSDFG 55
L DY T+K R +F Q+ AI +CH + VVHRDIK EN+L+D + KL DFG
Sbjct: 126 LFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG 185
Query: 56 FARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP 115
+++ Y F G+ Y+ PE + Y + +WS+G++L+ MV G +P
Sbjct: 186 SGAL--LHDEPYTD-----FDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIP 238
Query: 116 FDDTNYSELLKQVQKRVVFPESPRLSSSCKALISNILSP-VKFRIQMEDIRQDPWLKEDS 174
F+ E+L + + FP +S C ALI L+P R +E+I DPW++ +
Sbjct: 239 FERDQ--EIL---EAELHFPA--HVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPA 291
Query: 175 N--PVGKSKSAP 184
P+ SK P
Sbjct: 292 EDVPLNPSKGGP 303
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 92/177 (51%), Gaps = 15/177 (8%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVN 63
Y+ A Q+ +A+ +CH+ VVHRD+K ENLLL K +KL+DFG A +
Sbjct: 118 YSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIE---- 173
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
+ +Q F G+ Y SPE+L+ PY + D+W+ GV+L+ ++ G PF D +
Sbjct: 174 -VEGEQQAWFGFAGTPGYLSPEVLRKDPYG-KPVDLWACGVILYILLVGYPPFWDEDQHR 231
Query: 124 LLKQVQKRVV---FPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKEDSN 175
L +Q++ PE ++ K LI+ +L+ P K RI + + PW+ S
Sbjct: 232 LYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSK-RITAAEALKHPWISHRST 287
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 202 SSYATVKLATSARHSQDVAIKII-SKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAI 260
+++ V+ Q+ A KII +K + D+ K L RE + + LKHPN++R +I
Sbjct: 33 GAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQK--LEREARICRLLKHPNIVRLHDSI 90
Query: 261 ETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEV 300
Y+I + G L E I Y E A C ++
Sbjct: 91 SEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQI 130
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 96/184 (52%), Gaps = 22/184 (11%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLL---DDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
+L A+ + H VVHRD+K ENLL +D IK+ DFGFAR +N K T
Sbjct: 114 KLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLK-----T 168
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS-------ELLKQ 127
C + YA+PE+L Y + D+WS+GV+L+ M+ G++PF + S E++K+
Sbjct: 169 PCFTLHYAAPELLNQNGYD-ESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKK 227
Query: 128 VQKRVVFPESP---RLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKEDSNPVGKSKS 182
++K E +S K LI +L+ P K R++M +R + WL++ S
Sbjct: 228 IKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNK-RLKMSGLRYNEWLQDGSQLSSNPLM 286
Query: 183 APEV 186
P++
Sbjct: 287 TPDI 290
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLK-HPNLIRFLQAI 260
S++ + + +Q A+KIISK ++ +EI +K + HPN+++ +
Sbjct: 22 GSFSICRKCVHKKSNQAFAVKIISK------RMEANTQKEITALKLCEGHPNIVKLHEVF 75
Query: 261 ETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
+++ME G L E I+K+++ E +A
Sbjct: 76 HDQLHTFLVMELLNGGELFERIKKKKHFSETEA 108
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 94/184 (51%), Gaps = 22/184 (11%)
Query: 4 LLDYNTDK-------ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGF 56
L DY T+K R L +A+ + H ++VHRD+K EN+LLDD I+LSDFGF
Sbjct: 187 LFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGF 246
Query: 57 ARKYSVNNTDYKQNLSETFCGSYAYASPEILK-----GVPYTPQQSDIWSMGVVLFAMVY 111
+ + + + L E CG+ Y +PEILK P ++ D+W+ GV+LF ++
Sbjct: 247 S-----CHLEPGEKLRE-LCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLA 300
Query: 112 GRLPFDDTNYSELLKQV---QKRVVFPESPRLSSSCKALISNILS-PVKFRIQMEDIRQD 167
G PF +L+ + Q + PE SS+ K LIS +L + R+ E Q
Sbjct: 301 GSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360
Query: 168 PWLK 171
P+ +
Sbjct: 361 PFFE 364
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 78/130 (60%), Gaps = 7/130 (5%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTD 66
++ +AR + +++ A+ + H K +++RD+K +N+LLD + + KL+DFG ++ N
Sbjct: 121 FDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGV- 179
Query: 67 YKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLK 126
+ TFCG+ Y +PEIL+ + Y P D W+MGV+L+ M+ G PF+ N +L +
Sbjct: 180 ----TTATFCGTPDYIAPEILQEMLYGP-AVDWWAMGVLLYEMLCGHAPFEAENEDDLFE 234
Query: 127 QV-QKRVVFP 135
+ VV+P
Sbjct: 235 AILNDEVVYP 244
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 250 HPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEV 300
HP L + +T R++ +ME+ G L+ I+K R DE +A +E+
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEI 133
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 91/167 (54%), Gaps = 15/167 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDK---YNIKLSDFGFARKYSVNNTDYK 68
A R Q+ I Y HK +VHRD+K ENLLL+ K NI++ DFG + + +
Sbjct: 151 AARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS----- 205
Query: 69 QNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+ + + +Y Y +PE+L G ++ D+WS GV+L+ ++ G PF+ N ++LK+V
Sbjct: 206 KKMKDKIGTAY-YIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 262
Query: 129 QK-RVVF--PESPRLSSSCKALISNILSPV-KFRIQMEDIRQDPWLK 171
+K + F P+ ++S S K LI +L+ V RI D W++
Sbjct: 263 EKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 309
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L Q+ A+K+ISK Q K+ L RE++++K L HPN+++ + E
Sbjct: 60 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE 119
Query: 262 TTHRVYIIMEYAKNGSLL-EVIRKERYIDEDKALLCYSEVSNLS 304
Y++ E G L E+I ++R+ + D A + +S ++
Sbjct: 120 DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGIT 163
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 91/167 (54%), Gaps = 15/167 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDK---YNIKLSDFGFARKYSVNNTDYK 68
A R Q+ I Y HK +VHRD+K ENLLL+ K NI++ DFG + + +
Sbjct: 134 AARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS----- 188
Query: 69 QNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+ + + +Y Y +PE+L G ++ D+WS GV+L+ ++ G PF+ N ++LK+V
Sbjct: 189 KKMKDKIGTAY-YIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 245
Query: 129 QK-RVVF--PESPRLSSSCKALISNILSPV-KFRIQMEDIRQDPWLK 171
+K + F P+ ++S S K LI +L+ V RI D W++
Sbjct: 246 EKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 292
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L Q+ A+K+ISK Q K+ L RE++++K L HPN+++ + E
Sbjct: 43 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE 102
Query: 262 TTHRVYIIMEYAKNGSLL-EVIRKERYIDEDKALLCYSEVSNLS 304
Y++ E G L E+I ++R+ + D A + +S ++
Sbjct: 103 DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGIT 146
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 91/167 (54%), Gaps = 15/167 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDK---YNIKLSDFGFARKYSVNNTDYK 68
A R Q+ I Y HK +VHRD+K ENLLL+ K NI++ DFG + + +
Sbjct: 152 AARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS----- 206
Query: 69 QNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+ + + +Y Y +PE+L G ++ D+WS GV+L+ ++ G PF+ N ++LK+V
Sbjct: 207 KKMKDKIGTAY-YIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 263
Query: 129 QK-RVVF--PESPRLSSSCKALISNILSPV-KFRIQMEDIRQDPWLK 171
+K + F P+ ++S S K LI +L+ V RI D W++
Sbjct: 264 EKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 310
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L Q+ A+K+ISK Q K+ L RE++++K L HPN+++ + E
Sbjct: 61 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE 120
Query: 262 TTHRVYIIMEYAKNGSLL-EVIRKERYIDEDKALLCYSEVSNLS 304
Y++ E G L E+I ++R+ + D A + +S ++
Sbjct: 121 DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGIT 164
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 91/167 (54%), Gaps = 15/167 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDK---YNIKLSDFGFARKYSVNNTDYK 68
A R Q+ I Y HK +VHRD+K ENLLL+ K NI++ DFG + + +
Sbjct: 128 AARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS----- 182
Query: 69 QNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+ + + +Y Y +PE+L G ++ D+WS GV+L+ ++ G PF+ N ++LK+V
Sbjct: 183 KKMKDKIGTAY-YIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 239
Query: 129 QK-RVVF--PESPRLSSSCKALISNILSPV-KFRIQMEDIRQDPWLK 171
+K + F P+ ++S S K LI +L+ V RI D W++
Sbjct: 240 EKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 286
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L Q+ A+K+ISK Q K+ L RE++++K L HPN+++ + E
Sbjct: 37 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE 96
Query: 262 TTHRVYIIMEYAKNGSLL-EVIRKERYIDEDKALLCYSEVSNLS 304
Y++ E G L E+I ++R+ + D A + +S ++
Sbjct: 97 DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGIT 140
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 92/177 (51%), Gaps = 15/177 (8%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVN 63
Y+ A Q+ +A+ +CH+ VVHR++K ENLLL K +KL+DFG A +
Sbjct: 107 YSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIE---- 162
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
+ +Q F G+ Y SPE+L+ PY + D+W+ GV+L+ ++ G PF D +
Sbjct: 163 -VEGEQQAWFGFAGTPGYLSPEVLRKDPYG-KPVDLWACGVILYILLVGYPPFWDEDQHR 220
Query: 124 LLKQVQKRVV---FPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKEDSN 175
L +Q++ PE ++ K LI+ +L+ P K RI + + PW+ S
Sbjct: 221 LYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSK-RITAAEALKHPWISHRST 276
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Query: 202 SSYATVKLATSARHSQDVAIKII-SKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAI 260
+++ V+ Q+ A II +K + D+ K L RE + + LKHPN++R +I
Sbjct: 22 GAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQK--LEREARICRLLKHPNIVRLHDSI 79
Query: 261 ETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEV 300
Y+I + G L E I Y E A C ++
Sbjct: 80 SEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQI 119
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 92/175 (52%), Gaps = 15/175 (8%)
Query: 5 LDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYS 61
+ +N A Q+ + Y HK ++VHRD+K ENLLL+ K IK+ DFG + +
Sbjct: 131 MKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE 190
Query: 62 VNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNY 121
N K+ L G+ Y +PE+L+ ++ D+WS+GV+LF ++ G PF
Sbjct: 191 -NQKKMKERL-----GTAYYIAPEVLR--KKYDEKCDVWSIGVILFILLAGYPPFGGQTD 242
Query: 122 SELLKQVQK-RVVF--PESPRLSSSCKALISNILS-PVKFRIQMEDIRQDPWLKE 172
E+L++V+K + F PE +S K LI +L + RI + + PW+KE
Sbjct: 243 QEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKE 297
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V L + AIKII K K L E+ V+K L HPN+++ E
Sbjct: 48 GAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLL-EEVAVLKLLDHPNIMKLYDFFE 106
Query: 262 TTHRVYIIMEYAKNGSLL-EVIRKERYIDEDKALLCYSEVSNLS 304
Y++ME K G L E+I + ++ + D A++ +S ++
Sbjct: 107 DKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVT 150
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 93/172 (54%), Gaps = 15/172 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
A+ + +++ A+D H ++HRD+K +N+LLD ++KL+DFG K +
Sbjct: 176 AKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVH---- 231
Query: 72 SETFCGSYAYASPEILK---GVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDT---NYSEL 124
+T G+ Y SPE+LK G Y ++ D WS+GV LF M+ G PF D+ YS++
Sbjct: 232 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKI 291
Query: 125 LKQVQKRVVFPESPRLSSSCKALISNILSPVKFRI---QMEDIRQDPWLKED 173
+ + + FPE +S K LI L+ + R+ +E+I+Q P+ K D
Sbjct: 292 MDH-KNSLCFPEDAEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND 342
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/81 (19%), Positives = 37/81 (45%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
++ V+L + A+K++SK + F E +++ P +++ A +
Sbjct: 86 GAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQ 145
Query: 262 TTHRVYIIMEYAKNGSLLEVI 282
+Y++MEY G L+ ++
Sbjct: 146 DDKYLYMVMEYMPGGDLVNLM 166
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 92/154 (59%), Gaps = 18/154 (11%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQ 69
+ AR + ++++ A++Y H++ +++RD+K +N+LLD + +IKL+D+G ++ + D
Sbjct: 153 EHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGD--- 208
Query: 70 NLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFD--------DTNY 121
+ TFCG+ Y +PEIL+G Y D W++GV++F M+ GR PFD D N
Sbjct: 209 -TTSTFCGTPNYIAPEILRGEDYG-FSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT 266
Query: 122 SELLKQV--QKRVVFPESPRLSSSCKALISNILS 153
+ L QV +K++ P S LS +++ + L+
Sbjct: 267 EDYLFQVILEKQIRIPRS--LSVKAASVLKSFLN 298
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVV-KGLKHPNLIRFLQAI 260
SYA V L + + A++++ K D ++ E V + HP L+
Sbjct: 63 GSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF 122
Query: 261 ETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVS 301
+T R++ ++EY G L+ ++++R + E+ A +E+S
Sbjct: 123 QTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEIS 163
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 92/177 (51%), Gaps = 15/177 (8%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVN 63
Y+ A Q+ +++++CH +VHRD+K ENLLL K +KL+DFG A + +
Sbjct: 100 YSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD 159
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
Q F G+ Y SPE+L+ PY + D+W+ GV+L+ ++ G PF D +
Sbjct: 160 -----QQAWFGFAGTPGYLSPEVLRKDPYG-KPVDMWACGVILYILLVGYPPFWDEDQHR 213
Query: 124 LLKQVQKRVV---FPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKEDSN 175
L +Q++ PE ++ K LI+ +L+ P K RI + + PW+ + S
Sbjct: 214 LYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAK-RITASEALKHPWICQRST 269
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 202 SSYATVKLATSARHSQDVAIKII-SKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAI 260
+++ V+ Q+ A KII +K + D+ K L RE + + LKHPN++R +I
Sbjct: 15 GAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQK--LEREARICRLLKHPNIVRLHDSI 72
Query: 261 ETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEV 300
Y++ + G L E I Y E A C ++
Sbjct: 73 SEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQI 112
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 92/177 (51%), Gaps = 15/177 (8%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVN 63
Y+ A Q+ +++++CH +VHRD+K ENLLL K +KL+DFG A + +
Sbjct: 100 YSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD 159
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
Q F G+ Y SPE+L+ PY + D+W+ GV+L+ ++ G PF D +
Sbjct: 160 -----QQAWFGFAGTPGYLSPEVLRKDPYG-KPVDMWACGVILYILLVGYPPFWDEDQHR 213
Query: 124 LLKQVQKRVV---FPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKEDSN 175
L +Q++ PE ++ K LI+ +L+ P K RI + + PW+ + S
Sbjct: 214 LYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAK-RITASEALKHPWICQRST 269
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 202 SSYATVKLATSARHSQDVAIKII-SKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAI 260
+++ V+ Q+ A KII +K + D+ K L RE + + LKHPN++R +I
Sbjct: 15 GAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQK--LEREARICRLLKHPNIVRLHDSI 72
Query: 261 ETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEV 300
Y++ + G L E I Y E A C ++
Sbjct: 73 SEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQI 112
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 92/177 (51%), Gaps = 15/177 (8%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVN 63
Y+ A Q+ +A+ +CH+ VVHRD+K ENLLL K +KL+DFG A + +
Sbjct: 100 YSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGD 159
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
Q F G+ Y SPE+L+ Y + DIW+ GV+L+ ++ G PF D + +
Sbjct: 160 -----QQAWFGFAGTPGYLSPEVLRKEAYG-KPVDIWACGVILYILLVGYPPFWDEDQHK 213
Query: 124 LLKQVQKRVV---FPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKEDSN 175
L +Q++ PE ++ K LI+ +L+ P K RI + + PW+ + S
Sbjct: 214 LYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAK-RITAHEALKHPWVCQRST 269
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Query: 207 VKLATSARHSQDVAIKII-SKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHR 265
VKL T + A KII +K + D+ K L RE + + LKH N++R +I
Sbjct: 24 VKLCTG----HEYAAKIINTKKLSARDHQK--LEREARICRLLKHSNIVRLHDSISEEGF 77
Query: 266 VYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEV 300
Y++ + G L E I Y E A C ++
Sbjct: 78 HYLVFDLVTGGELFEDIVAREYYSEADASHCIQQI 112
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 88/167 (52%), Gaps = 15/167 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDK---YNIKLSDFGFARKYSVNNTDYK 68
A R Q+ I Y HK +VHRD+K ENLLL+ K NI++ DFG + + +
Sbjct: 128 AARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKD 187
Query: 69 QNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+ G+ Y +PE+L G ++ D+WS GV+L+ ++ G PF+ N ++LK+V
Sbjct: 188 K------IGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 239
Query: 129 QK-RVVF--PESPRLSSSCKALISNILSPV-KFRIQMEDIRQDPWLK 171
+K + F P+ ++S S K LI L+ V RI D W++
Sbjct: 240 EKGKYTFELPQWKKVSESAKDLIRKXLTYVPSXRISARDALDHEWIQ 286
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L Q+ A+K+ISK Q K+ L RE++++K L HPN+ + + E
Sbjct: 37 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFE 96
Query: 262 TTHRVYIIMEYAKNGSLL-EVIRKERYIDEDKALLCYSEVSNLS 304
Y++ E G L E+I ++R+ + D A + +S ++
Sbjct: 97 DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGIT 140
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 105/206 (50%), Gaps = 37/206 (17%)
Query: 4 LLDYNTDK-------ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFG 55
L D+ T++ AR +F Q+ +A+ +CH V+HRDIK EN+L+D ++ +KL DFG
Sbjct: 102 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 161
Query: 56 FARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP 115
+ K + F G+ Y+ PE ++ Y + + +WS+G++L+ MV G +P
Sbjct: 162 -------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
Query: 116 FDDTNYSELLKQVQKRVVFPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKED 173
F+ + ++ +V F + R+SS C+ LI L+ P R E+I+ PW+++
Sbjct: 215 FEHDE-----EIIRGQVFFRQ--RVSSECQHLIRWCLALRPSD-RPTFEEIQNHPWMQDV 266
Query: 174 SNP------------VGKSKSAPEVG 187
P G SKS P G
Sbjct: 267 LLPQETAEIHLHSLSPGPSKSGPSSG 292
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 99/165 (60%), Gaps = 14/165 (8%)
Query: 16 FSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETF 75
+LADA+ YCH K V+HRDIK ENLLL K +K++DFG +SV+ ++ +T
Sbjct: 129 MEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFG----WSVHAPSLRR---KTM 181
Query: 76 CGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQK-RVVF 134
CG+ Y PE+++G + ++ D+W +GV+ + ++ G PF+ +++E +++ K + F
Sbjct: 182 CGTLDYLPPEMIEGRMHN-EKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKF 240
Query: 135 PESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSNPV 177
P S + + + LIS +L +P + R+ + + PW++ +S V
Sbjct: 241 PAS--VPTGAQDLISKLLRHNPSE-RLPLAQVSAHPWVRANSRRV 282
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V LA + VA+K++ K Q + ++ L REIE+ L HPN++R
Sbjct: 34 GKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFY 93
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSN 302
R+Y+I+EYA G L + ++K DE + E+++
Sbjct: 94 DRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELAD 134
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 88/169 (52%), Gaps = 11/169 (6%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTD 66
++ +A + +++ + + H K +V+RD+K +N+LLD +IK++DFG ++ + D
Sbjct: 115 FDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG--D 172
Query: 67 YKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLK 126
K N FCG+ Y +PEIL G Y D WS GV+L+ M+ G+ PF + EL
Sbjct: 173 AKTN---XFCGTPDYIAPEILLGQKYN-HSVDWWSFGVLLYEMLIGQSPFHGQDEEELFH 228
Query: 127 QVQKRVVFPESPR-LSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKE 172
+ R+ P PR L K L+ + P K DIRQ P +E
Sbjct: 229 SI--RMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE 275
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 42/100 (42%), Gaps = 1/100 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVK-GLKHPNLIRFLQAI 260
S+ V LA + +Q AIK + K +D + E V+ +HP L
Sbjct: 28 GSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTF 87
Query: 261 ETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEV 300
+T ++ +MEY G L+ I+ D +A +E+
Sbjct: 88 QTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEI 127
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 88/169 (52%), Gaps = 11/169 (6%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTD 66
++ +A + +++ + + H K +V+RD+K +N+LLD +IK++DFG ++ + D
Sbjct: 116 FDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG--D 173
Query: 67 YKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLK 126
K N FCG+ Y +PEIL G Y D WS GV+L+ M+ G+ PF + EL
Sbjct: 174 AKTN---EFCGTPDYIAPEILLGQKYN-HSVDWWSFGVLLYEMLIGQSPFHGQDEEELFH 229
Query: 127 QVQKRVVFPESPR-LSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKE 172
+ R+ P PR L K L+ + P K DIRQ P +E
Sbjct: 230 SI--RMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE 276
Score = 31.2 bits (69), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 42/100 (42%), Gaps = 1/100 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVK-GLKHPNLIRFLQAI 260
S+ V LA + +Q AIK + K +D + E V+ +HP L
Sbjct: 29 GSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTF 88
Query: 261 ETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEV 300
+T ++ +MEY G L+ I+ D +A +E+
Sbjct: 89 QTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEI 128
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 98/179 (54%), Gaps = 25/179 (13%)
Query: 4 LLDYNTDK-------ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFG 55
L D+ T++ AR +F Q+ +A+ +CH V+HRDIK EN+L+D ++ +KL DFG
Sbjct: 100 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 159
Query: 56 FARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP 115
+ K + F G+ Y+ PE ++ Y + + +WS+G++L+ MV G +P
Sbjct: 160 -------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 212
Query: 116 FDDTNYSELLKQVQKRVVFPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKE 172
F+ + ++ +V F + R+SS C+ LI L+ P R E+I+ PW+++
Sbjct: 213 FEHDE-----EIIRGQVFFRQ--RVSSECQHLIRWCLALRPSD-RPTFEEIQNHPWMQD 263
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 98/179 (54%), Gaps = 25/179 (13%)
Query: 4 LLDYNTDK-------ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFG 55
L D+ T++ AR +F Q+ +A+ +CH V+HRDIK EN+L+D ++ +KL DFG
Sbjct: 102 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 161
Query: 56 FARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP 115
+ K + F G+ Y+ PE ++ Y + + +WS+G++L+ MV G +P
Sbjct: 162 -------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
Query: 116 FDDTNYSELLKQVQKRVVFPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKE 172
F+ + ++ +V F + R+SS C+ LI L+ P R E+I+ PW+++
Sbjct: 215 FEHDE-----EIIRGQVFFRQ--RVSSECQHLIRWCLALRPSD-RPTFEEIQNHPWMQD 265
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 92/181 (50%), Gaps = 16/181 (8%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTD 66
++ ++AR + Q+ + Y H ++HRD+ NLLL NIK++DFG A + + +
Sbjct: 109 FSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEK 168
Query: 67 YKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLK 126
+ T CG+ Y SPEI + +SD+WS+G + + ++ GR PFD ++ +K
Sbjct: 169 HY-----TLCGTPNYISPEIATRSAHG-LESDVWSLGCMFYTLLIGRPPFD----TDTVK 218
Query: 127 QVQKRVVFP--ESPR-LSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSNPVGKSK 181
+VV E P LS K LI +L +P R+ + + P++ +S+ K +
Sbjct: 219 NTLNKVVLADYEMPSFLSIEAKDLIHQLLRRNPAD-RLSLSSVLDHPFMSRNSSTKSKDE 277
Query: 182 S 182
Sbjct: 278 G 278
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+A V A S +VAIK+I K + + + E+++ LKHP+++ E
Sbjct: 22 GSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFE 81
Query: 262 TTHRVYIIMEYAKNGSL 278
++ VY+++E NG +
Sbjct: 82 DSNYVYLVLEMCHNGEM 98
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 98/179 (54%), Gaps = 25/179 (13%)
Query: 4 LLDYNTDK-------ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFG 55
L D+ T++ AR +F Q+ +A+ +CH V+HRDIK EN+L+D ++ +KL DFG
Sbjct: 97 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 156
Query: 56 FARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP 115
+ K + F G+ Y+ PE ++ Y + + +WS+G++L+ MV G +P
Sbjct: 157 -------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 209
Query: 116 FDDTNYSELLKQVQKRVVFPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKE 172
F+ + ++ +V F + R+SS C+ LI L+ P R E+I+ PW+++
Sbjct: 210 FEHDE-----EIIRGQVFFRQ--RVSSECQHLIRWCLALRPSD-RPTFEEIQNHPWMQD 260
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 98/179 (54%), Gaps = 25/179 (13%)
Query: 4 LLDYNTDK-------ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFG 55
L D+ T++ AR +F Q+ +A+ +CH V+HRDIK EN+L+D ++ +KL DFG
Sbjct: 101 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 160
Query: 56 FARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP 115
+ K + F G+ Y+ PE ++ Y + + +WS+G++L+ MV G +P
Sbjct: 161 -------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 213
Query: 116 FDDTNYSELLKQVQKRVVFPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKE 172
F+ + ++ +V F + R+SS C+ LI L+ P R E+I+ PW+++
Sbjct: 214 FEHDE-----EIIRGQVFFRQ--RVSSECQHLIRWCLALRPSD-RPTFEEIQNHPWMQD 264
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 98/179 (54%), Gaps = 25/179 (13%)
Query: 4 LLDYNTDK-------ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFG 55
L D+ T++ AR +F Q+ +A+ +CH V+HRDIK EN+L+D ++ +KL DFG
Sbjct: 144 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 203
Query: 56 FARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP 115
+ K + F G+ Y+ PE ++ Y + + +WS+G++L+ MV G +P
Sbjct: 204 -------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
Query: 116 FDDTNYSELLKQVQKRVVFPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKE 172
F+ + ++ +V F + R+SS C+ LI L+ P R E+I+ PW+++
Sbjct: 257 FEHDE-----EIIRGQVFFRQ--RVSSECQHLIRWCLALRPSD-RPTFEEIQNHPWMQD 307
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 98/179 (54%), Gaps = 25/179 (13%)
Query: 4 LLDYNTDK-------ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFG 55
L D+ T++ AR +F Q+ +A+ +CH V+HRDIK EN+L+D ++ +KL DFG
Sbjct: 144 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 203
Query: 56 FARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP 115
+ K + F G+ Y+ PE ++ Y + + +WS+G++L+ MV G +P
Sbjct: 204 -------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
Query: 116 FDDTNYSELLKQVQKRVVFPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKE 172
F+ + ++ +V F + R+SS C+ LI L+ P R E+I+ PW+++
Sbjct: 257 FEHDE-----EIIRGQVFFRQ--RVSSECQHLIRWCLALRPSD-RPTFEEIQNHPWMQD 307
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 98/179 (54%), Gaps = 25/179 (13%)
Query: 4 LLDYNTDK-------ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFG 55
L D+ T++ AR +F Q+ +A+ +CH V+HRDIK EN+L+D ++ +KL DFG
Sbjct: 129 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 188
Query: 56 FARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP 115
+ K + F G+ Y+ PE ++ Y + + +WS+G++L+ MV G +P
Sbjct: 189 -------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
Query: 116 FDDTNYSELLKQVQKRVVFPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKE 172
F+ + ++ +V F + R+SS C+ LI L+ P R E+I+ PW+++
Sbjct: 242 FEHDE-----EIIRGQVFFRQ--RVSSECQHLIRWCLALRPSD-RPTFEEIQNHPWMQD 292
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 91/154 (59%), Gaps = 18/154 (11%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQ 69
+ AR + ++++ A++Y H++ +++RD+K +N+LLD + +IKL+D+G ++ + D
Sbjct: 106 EHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGD--- 161
Query: 70 NLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFD--------DTNY 121
+ FCG+ Y +PEIL+G Y D W++GV++F M+ GR PFD D N
Sbjct: 162 -TTSXFCGTPNYIAPEILRGEDYG-FSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT 219
Query: 122 SELLKQV--QKRVVFPESPRLSSSCKALISNILS 153
+ L QV +K++ P S LS +++ + L+
Sbjct: 220 EDYLFQVILEKQIRIPRS--LSVKAASVLKSFLN 251
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVV-KGLKHPNLIRFLQAI 260
SYA V L + + A+K++ K D ++ E V + HP L+
Sbjct: 16 GSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF 75
Query: 261 ETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVS 301
+T R++ ++EY G L+ ++++R + E+ A +E+S
Sbjct: 76 QTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEIS 116
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 93/177 (52%), Gaps = 15/177 (8%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVN 63
Y+ A Q+ +++++ H+ +VHRD+K ENLLL K +KL+DFG A +
Sbjct: 127 YSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIE---- 182
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
+Q F G+ Y SPE+L+ PY + DIW+ GV+L+ ++ G PF D + +
Sbjct: 183 -VQGEQQAWFGFAGTPGYLSPEVLRKDPYG-KPVDIWACGVILYILLVGYPPFWDEDQHK 240
Query: 124 LLKQVQKRVV---FPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKEDSN 175
L +Q++ PE ++ K LI+ +L+ P K RI + + PW+ + S
Sbjct: 241 LYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAK-RITADQALKHPWVCQRST 296
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Query: 202 SSYATVKLATSARHSQDVAIKII-SKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAI 260
+++ V+ +Q+ A KII +K + D+ K L RE + + LKHPN++R +I
Sbjct: 42 GAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQK--LEREARICRLLKHPNIVRLHDSI 99
Query: 261 ETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEV 300
Y++ + G L E I Y E A C ++
Sbjct: 100 SEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQI 139
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 91/154 (59%), Gaps = 18/154 (11%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQ 69
+ AR + ++++ A++Y H++ +++RD+K +N+LLD + +IKL+D+G ++ + D
Sbjct: 110 EHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGD--- 165
Query: 70 NLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFD--------DTNY 121
+ FCG+ Y +PEIL+G Y D W++GV++F M+ GR PFD D N
Sbjct: 166 -TTSXFCGTPNYIAPEILRGEDYG-FSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT 223
Query: 122 SELLKQV--QKRVVFPESPRLSSSCKALISNILS 153
+ L QV +K++ P S LS +++ + L+
Sbjct: 224 EDYLFQVILEKQIRIPRS--LSVKAASVLKSFLN 255
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVV-KGLKHPNLIRFLQAI 260
SYA V L + + A+K++ K D ++ E V + HP L+
Sbjct: 20 GSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF 79
Query: 261 ETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVS 301
+T R++ ++EY G L+ ++++R + E+ A +E+S
Sbjct: 80 QTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEIS 120
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 98/179 (54%), Gaps = 25/179 (13%)
Query: 4 LLDYNTDK-------ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFG 55
L D+ T++ AR +F Q+ +A+ +CH V+HRDIK EN+L+D ++ +KL DFG
Sbjct: 101 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 160
Query: 56 FARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP 115
+ K + F G+ Y+ PE ++ Y + + +WS+G++L+ MV G +P
Sbjct: 161 -------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 213
Query: 116 FDDTNYSELLKQVQKRVVFPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKE 172
F+ + ++ +V F + R+SS C+ LI L+ P R E+I+ PW+++
Sbjct: 214 FEHDE-----EIIRGQVFFRQ--RVSSECQHLIRWCLALRPSD-RPTFEEIQNHPWMQD 264
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 98/179 (54%), Gaps = 25/179 (13%)
Query: 4 LLDYNTDK-------ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFG 55
L D+ T++ AR +F Q+ +A+ +CH V+HRDIK EN+L+D ++ +KL DFG
Sbjct: 116 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 175
Query: 56 FARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP 115
+ K + F G+ Y+ PE ++ Y + + +WS+G++L+ MV G +P
Sbjct: 176 -------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 228
Query: 116 FDDTNYSELLKQVQKRVVFPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKE 172
F+ + ++ +V F + R+SS C+ LI L+ P R E+I+ PW+++
Sbjct: 229 FEHDE-----EIIRGQVFFRQ--RVSSECQHLIRWCLALRPSD-RPTFEEIQNHPWMQD 279
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 98/179 (54%), Gaps = 25/179 (13%)
Query: 4 LLDYNTDK-------ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFG 55
L D+ T++ AR +F Q+ +A+ +CH V+HRDIK EN+L+D ++ +KL DFG
Sbjct: 102 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 161
Query: 56 FARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP 115
+ K + F G+ Y+ PE ++ Y + + +WS+G++L+ MV G +P
Sbjct: 162 -------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
Query: 116 FDDTNYSELLKQVQKRVVFPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKE 172
F+ + ++ +V F + R+SS C+ LI L+ P R E+I+ PW+++
Sbjct: 215 FEHDE-----EIIRGQVFFRQ--RVSSECQHLIRWCLALRPSD-RPTFEEIQNHPWMQD 265
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 98/179 (54%), Gaps = 25/179 (13%)
Query: 4 LLDYNTDK-------ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFG 55
L D+ T++ AR +F Q+ +A+ +CH V+HRDIK EN+L+D ++ +KL DFG
Sbjct: 136 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 195
Query: 56 FARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP 115
+ K + F G+ Y+ PE ++ Y + + +WS+G++L+ MV G +P
Sbjct: 196 -------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 248
Query: 116 FDDTNYSELLKQVQKRVVFPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKE 172
F+ + ++ +V F + R+SS C+ LI L+ P R E+I+ PW+++
Sbjct: 249 FEHDE-----EIIRGQVFFRQ--RVSSECQHLIRWCLALRPSD-RPTFEEIQNHPWMQD 299
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 98/179 (54%), Gaps = 25/179 (13%)
Query: 4 LLDYNTDK-------ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFG 55
L D+ T++ AR +F Q+ +A+ +CH V+HRDIK EN+L+D ++ +KL DFG
Sbjct: 117 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 176
Query: 56 FARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP 115
+ K + F G+ Y+ PE ++ Y + + +WS+G++L+ MV G +P
Sbjct: 177 -------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
Query: 116 FDDTNYSELLKQVQKRVVFPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKE 172
F+ + ++ +V F + R+SS C+ LI L+ P R E+I+ PW+++
Sbjct: 230 FEHDE-----EIIRGQVFFRQ--RVSSECQHLIRWCLALRPSD-RPTFEEIQNHPWMQD 280
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 97/179 (54%), Gaps = 25/179 (13%)
Query: 4 LLDYNTDK-------ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFG 55
L D+ T++ AR +F Q+ +A+ +CH V+HRDIK EN+L+D ++ +KL DFG
Sbjct: 97 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 156
Query: 56 FARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP 115
+ K + F G+ Y+ PE ++ Y + + +WS+G++L+ MV G +P
Sbjct: 157 -------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 209
Query: 116 FDDTNYSELLKQVQKRVVFPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKE 172
F+ + + +V F + R+SS C+ LI L+ P R E+I+ PW+++
Sbjct: 210 FEHDE-----EIIGGQVFFRQ--RVSSECQHLIRWCLALRPSD-RPTFEEIQNHPWMQD 260
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 87/146 (59%), Gaps = 9/146 (6%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTD 66
+ +A + ++++ + + HK+ +++RD+K +N++LD + +IK++DFG +++ ++
Sbjct: 117 FKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVT 176
Query: 67 YKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLK 126
++ FCG+ Y +PEI+ PY + D W+ GV+L+ M+ G+ PFD + EL +
Sbjct: 177 TRE-----FCGTPDYIAPEIIAYQPYG-KSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQ 230
Query: 127 QV-QKRVVFPE--SPRLSSSCKALIS 149
+ + V +P+ S S CK L++
Sbjct: 231 SIMEHNVSYPKSLSKEAVSICKGLMT 256
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGL-KHPNLIRFLQAI 260
S+ V LA + AIKI+ K D + E V+ L K P L +
Sbjct: 30 GSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLHSCF 89
Query: 261 ETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVS 301
+T R+Y +MEY G L+ I++ E +A+ +E+S
Sbjct: 90 QTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEIS 130
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 97/179 (54%), Gaps = 25/179 (13%)
Query: 4 LLDYNTDK-------ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFG 55
L D+ T++ AR +F Q+ +A+ +CH V+HRDIK EN+L+D ++ +KL DFG
Sbjct: 129 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 188
Query: 56 FARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP 115
+ K + F G+ Y+ PE ++ Y + + +WS+G++L+ MV G +P
Sbjct: 189 -------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
Query: 116 FDDTNYSELLKQVQKRVVFPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKE 172
F+ + + +V F + R+SS C+ LI L+ P R E+I+ PW+++
Sbjct: 242 FEHDE-----EIIGGQVFFRQ--RVSSECQHLIRWCLALRPSD-RPTFEEIQNHPWMQD 292
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 97/179 (54%), Gaps = 25/179 (13%)
Query: 4 LLDYNTDK-------ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFG 55
L D+ T++ AR +F Q+ +A+ +CH V+HRDIK EN+L+D ++ +KL DFG
Sbjct: 97 LFDFITERGALQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFG 156
Query: 56 FARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP 115
+ K + F G+ Y+ PE ++ Y + + +WS+G++L+ MV G +P
Sbjct: 157 -------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 209
Query: 116 FDDTNYSELLKQVQKRVVFPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKE 172
F+ + ++ +V F + R+S C+ LI L+ P R E+I+ PW+++
Sbjct: 210 FEHDE-----EIIRGQVFFRQ--RVSXECQHLIRWCLALRPSD-RPTFEEIQNHPWMQD 260
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 83/138 (60%), Gaps = 16/138 (11%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQ 69
+ AR + ++++ A++Y H++ +++RD+K +N+LLD + +IKL+D+G ++ + D
Sbjct: 121 EHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGD--- 176
Query: 70 NLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFD--------DTNY 121
+ FCG+ Y +PEIL+G Y D W++GV++F M+ GR PFD D N
Sbjct: 177 -TTSXFCGTPNYIAPEILRGEDYG-FSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT 234
Query: 122 SELLKQV--QKRVVFPES 137
+ L QV +K++ P S
Sbjct: 235 EDYLFQVILEKQIRIPRS 252
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVV-KGLKHPNLIRFLQAI 260
SYA V L + + A+K++ K D ++ E V + HP L+
Sbjct: 31 GSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF 90
Query: 261 ETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVS 301
+T R++ ++EY G L+ ++++R + E+ A +E+S
Sbjct: 91 QTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEIS 131
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 97/179 (54%), Gaps = 25/179 (13%)
Query: 4 LLDYNTDK-------ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFG 55
L D+ T++ AR +F Q+ +A+ +CH V+HRDIK EN+L+D ++ +KL DFG
Sbjct: 129 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 188
Query: 56 FARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP 115
+ K + F G+ Y+ PE ++ Y + + +WS+G++L+ MV G +P
Sbjct: 189 -------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
Query: 116 FDDTNYSELLKQVQKRVVFPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKE 172
F+ + + +V F + R+SS C+ LI L+ P R E+I+ PW+++
Sbjct: 242 FEHDE-----EIIGGQVFFRQ--RVSSECQHLIRWCLALRPSD-RPTFEEIQNHPWMQD 292
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 97/179 (54%), Gaps = 25/179 (13%)
Query: 4 LLDYNTDK-------ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFG 55
L D+ T++ AR +F Q+ +A+ +CH V+HRDIK EN+L+D ++ +KL DFG
Sbjct: 130 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 189
Query: 56 FARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP 115
+ K + F G+ Y+ PE ++ Y + + +WS+G++L+ MV G +P
Sbjct: 190 -------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
Query: 116 FDDTNYSELLKQVQKRVVFPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKE 172
F+ + + +V F + R+SS C+ LI L+ P R E+I+ PW+++
Sbjct: 243 FEHDE-----EIIGGQVFFRQ--RVSSECQHLIRWCLALRPSD-RPTFEEIQNHPWMQD 293
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 92/175 (52%), Gaps = 18/175 (10%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVN 63
Y+ A + Q+ +A+ YCH +++HRD+K EN+LL K N +KL DFG A + +
Sbjct: 127 YSEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGES 186
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++ G+ + +PE++K PY + D+W GV+LF ++ G LPF T E
Sbjct: 187 GL-----VAGGRVGTPHFMAPEVVKREPYG-KPVDVWGCGVILFILLSGCLPFYGTK--E 238
Query: 124 LLKQVQKRVVFPESPR----LSSSCKALISN--ILSPVKFRIQMEDIRQDPWLKE 172
L + + + +PR +S S K L+ +L P + RI + + PWLKE
Sbjct: 239 RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAE-RITVYEALNHPWLKE 292
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/86 (20%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 202 SSYATVKLATSARHSQDVAIKII--SKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQA 259
+++ V+ + Q A+KI+ +K + + L RE + LKHP+++ L+
Sbjct: 35 GAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLET 94
Query: 260 IETTHRVYIIMEYAKNGSL-LEVIRK 284
+ +Y++ E+ L E++++
Sbjct: 95 YSSDGMLYMVFEFMDGADLCFEIVKR 120
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 97/179 (54%), Gaps = 25/179 (13%)
Query: 4 LLDYNTDK-------ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFG 55
L D+ T++ AR +F Q+ +A+ +CH V+HRDIK EN+L+D ++ +KL DFG
Sbjct: 130 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 189
Query: 56 FARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP 115
+ K + F G+ Y+ PE ++ Y + + +WS+G++L+ MV G +P
Sbjct: 190 -------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
Query: 116 FDDTNYSELLKQVQKRVVFPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKE 172
F+ + + +V F + R+SS C+ LI L+ P R E+I+ PW+++
Sbjct: 243 FEHDE-----EIIGGQVFFRQ--RVSSECQHLIRWCLALRPSD-RPTFEEIQNHPWMQD 293
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 97/179 (54%), Gaps = 25/179 (13%)
Query: 4 LLDYNTDK-------ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFG 55
L D+ T++ AR +F Q+ +A+ +CH V+HRDIK EN+L+D ++ +KL DFG
Sbjct: 117 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 176
Query: 56 FARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP 115
+ K + F G+ Y+ PE ++ Y + + +WS+G++L+ MV G +P
Sbjct: 177 -------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
Query: 116 FDDTNYSELLKQVQKRVVFPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKE 172
F+ + ++ +V F + R+S C+ LI L+ P R E+I+ PW+++
Sbjct: 230 FEHDE-----EIIRGQVFFRQ--RVSXECQHLIRWCLALRPXD-RPTFEEIQNHPWMQD 280
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 97/179 (54%), Gaps = 25/179 (13%)
Query: 4 LLDYNTDK-------ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFG 55
L D+ T++ AR +F Q+ +A+ +CH V+HRDIK EN+L+D ++ +KL DFG
Sbjct: 124 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 183
Query: 56 FARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP 115
+ K + F G+ Y+ PE ++ Y + + +WS+G++L+ MV G +P
Sbjct: 184 -------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 236
Query: 116 FDDTNYSELLKQVQKRVVFPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKE 172
F+ + ++ +V F + R+S C+ LI L+ P R E+I+ PW+++
Sbjct: 237 FEHDE-----EIIRGQVFFRQ--RVSXECQHLIRWCLALRPSD-RPTFEEIQNHPWMQD 287
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 85/157 (54%), Gaps = 15/157 (9%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQ 69
D A + +Q+ D I + H +VHRDIK +N+L+D +K+ DFG A+ S +
Sbjct: 111 DTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALS------ET 164
Query: 70 NLSET--FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFD-DTNYSELLK 126
+L++T G+ Y SPE KG T + +DI+S+G+VL+ M+ G PF+ +T S +K
Sbjct: 165 SLTQTNHVLGTVQYFSPEQAKG-EATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIK 223
Query: 127 QVQKRVVFPESPRLSSSCKALISNILSPVKFRIQMED 163
+Q V P +++ + I LS V R +D
Sbjct: 224 HIQDSV-----PNVTTDVRKDIPQSLSNVILRATEKD 255
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Query: 202 SSYATVKLATSARHSQDVAIK-IISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAI 260
+TV LA + VAIK I + + LK+F RE+ L H N++ +
Sbjct: 22 GGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRF-EREVHNSSQLSHQNIVSMIDVD 80
Query: 261 ETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKAL 294
E Y++MEY + +L E I + D A+
Sbjct: 81 EEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAI 114
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 97/179 (54%), Gaps = 25/179 (13%)
Query: 4 LLDYNTDK-------ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFG 55
L D+ T++ AR +F Q+ +A+ +CH V+HRDIK EN+L+D ++ +KL DFG
Sbjct: 144 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 203
Query: 56 FARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP 115
+ K + F G+ Y+ PE ++ Y + + +WS+G++L+ MV G +P
Sbjct: 204 -------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
Query: 116 FDDTNYSELLKQVQKRVVFPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKE 172
F+ + ++ +V F + R+S C+ LI L+ P R E+I+ PW+++
Sbjct: 257 FEHDE-----EIIRGQVFFRQ--RVSXECQHLIRWCLALRPSD-RPTFEEIQNHPWMQD 307
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 97/179 (54%), Gaps = 25/179 (13%)
Query: 4 LLDYNTDK-------ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFG 55
L D+ T++ AR +F Q+ +A+ +CH V+HRDIK EN+L+D ++ +KL DFG
Sbjct: 149 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 208
Query: 56 FARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP 115
+ K + F G+ Y+ PE ++ Y + + +WS+G++L+ MV G +P
Sbjct: 209 -------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 261
Query: 116 FDDTNYSELLKQVQKRVVFPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKE 172
F+ + ++ +V F + R+S C+ LI L+ P R E+I+ PW+++
Sbjct: 262 FEHDE-----EIIRGQVFFRQ--RVSXECQHLIRWCLALRPSD-RPTFEEIQNHPWMQD 312
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 82/174 (47%), Gaps = 16/174 (9%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
+A +F QL D ++Y H + +VH+DIK NLLL +K+S G A D +
Sbjct: 110 QAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAAD---D 166
Query: 71 LSETFCGSYAYASPEILKGV-PYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQ 129
T GS A+ PEI G+ ++ + DIWS GV L+ + G PF+ N +L + +
Sbjct: 167 TCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIG 226
Query: 130 KRVVFPESPRLSSSCKALISNIL------SPVKFRIQMEDIRQDPWLKEDSNPV 177
K S + C +S++L P K R + IRQ W ++ P
Sbjct: 227 KG-----SYAIPGDCGPPLSDLLKGMLEYEPAK-RFSIRQIRQHSWFRKKHPPA 274
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 34/52 (65%), Gaps = 4/52 (7%)
Query: 240 REIEVVKGLKHPNLIRFLQAI--ETTHRVYIIMEYAKNG--SLLEVIRKERY 287
+EI++++ L+H N+I+ + + E ++Y++MEY G +L+ + ++R+
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRF 106
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 94/176 (53%), Gaps = 15/176 (8%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKY---NIKLSDFGFARKYSVN 63
++ A R Q+ I Y HK ++VHRD+K EN+LL+ K +IK+ DFG + +
Sbjct: 118 FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-Q 176
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
NT K + G+ Y +PE+L+G ++ D+WS GV+L+ ++ G PF N +
Sbjct: 177 NTKMKDRI-----GTAYYIAPEVLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYD 229
Query: 124 LLKQVQ-KRVVF--PESPRLSSSCKALISNILS-PVKFRIQMEDIRQDPWLKEDSN 175
+LK+V+ + F P+ +S K LI +L+ RI + PW+++ S+
Sbjct: 230 ILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSS 285
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 217 QDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNG 276
Q+ A+K+I+K A L RE+E++K L HPN+++ + +E + YI+ E G
Sbjct: 48 QEYAVKVINKASAKNKDTSTIL-REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG 106
Query: 277 SLL-EVIRKERYIDEDKALLCYSEVSNLSQTFSRCCY 312
L E+I+++R+ + D A + + Q FS Y
Sbjct: 107 ELFDEIIKRKRFSEHDAARI-------IKQVFSGITY 136
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 97/179 (54%), Gaps = 25/179 (13%)
Query: 4 LLDYNTDK-------ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFG 55
L D+ T++ AR +F Q+ +A+ +CH V+HRDIK EN+L+D ++ +KL DFG
Sbjct: 116 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 175
Query: 56 FARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP 115
+ K + F G+ Y+ PE ++ Y + + +WS+G++L+ MV G +P
Sbjct: 176 -------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 228
Query: 116 FDDTNYSELLKQVQKRVVFPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKE 172
F+ + ++ +V F + R+S C+ LI L+ P R E+I+ PW+++
Sbjct: 229 FEHDE-----EIIRGQVFFRQ--RVSXECQHLIRWCLALRPSD-RPTFEEIQNHPWMQD 279
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 90/171 (52%), Gaps = 12/171 (7%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLL--DDKYNIKLSDFGFARK-YSVNNTDYKQNLSET 74
Q+ A+ Y H + + HRDIK EN L + + IKL DFG +++ Y +NN +Y T
Sbjct: 176 QIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYG--MTT 233
Query: 75 FCGSYAYASPEILKGV--PYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRV 132
G+ + +PE+L Y P+ D WS GV+L ++ G +PF N ++ + QV +
Sbjct: 234 KAGTPYFVAPEVLNTTNESYGPK-CDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKK 292
Query: 133 VFPESPR---LSSSCKALISNILS-PVKFRIQMEDIRQDPWLKEDSNPVGK 179
+ E+P LS + L+SN+L+ V R Q PW+ + S+ + K
Sbjct: 293 LCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSDKIYK 343
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 12/86 (13%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIE-------VVKGLKHPNLI 254
SY V++A + AIKI++K + +++ P+++E ++K L HPN+
Sbjct: 37 GSYGVVRVAIENQTRAIRAIKIMNK-----NKIRQINPKDVERIKTEVRLMKKLHHPNIA 91
Query: 255 RFLQAIETTHRVYIIMEYAKNGSLLE 280
R + E + ++ME G LL+
Sbjct: 92 RLYEVYEDEQYICLVMELCHGGHLLD 117
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 97/179 (54%), Gaps = 25/179 (13%)
Query: 4 LLDYNTDK-------ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFG 55
L D+ T++ AR +F Q+ +A+ +CH V+HRDIK EN+L+D ++ +KL DFG
Sbjct: 117 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 176
Query: 56 FARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP 115
+ K + F G+ Y+ PE ++ Y + + +WS+G++L+ MV G +P
Sbjct: 177 -------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
Query: 116 FDDTNYSELLKQVQKRVVFPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKE 172
F+ + ++ +V F + R+S C+ LI L+ P R E+I+ PW+++
Sbjct: 230 FEHDE-----EIIRGQVFFRQ--RVSXECQHLIRWCLALRPSD-RPTFEEIQNHPWMQD 280
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 94/176 (53%), Gaps = 15/176 (8%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKY---NIKLSDFGFARKYSVN 63
++ A R Q+ I Y HK ++VHRD+K EN+LL+ K +IK+ DFG + +
Sbjct: 118 FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-Q 176
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
NT K + G+ Y +PE+L+G ++ D+WS GV+L+ ++ G PF N +
Sbjct: 177 NTKMKDRI-----GTAYYIAPEVLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYD 229
Query: 124 LLKQVQ-KRVVF--PESPRLSSSCKALISNILS-PVKFRIQMEDIRQDPWLKEDSN 175
+LK+V+ + F P+ +S K LI +L+ RI + PW+++ S+
Sbjct: 230 ILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSS 285
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 217 QDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNG 276
Q+ A+K+I+K A L RE+E++K L HPN+++ + +E + YI+ E G
Sbjct: 48 QEYAVKVINKASAKNKDTSTIL-REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG 106
Query: 277 SLL-EVIRKERYIDEDKALLCYSEVSNLSQTFSRCCY 312
L E+I+++R+ + D A + + Q FS Y
Sbjct: 107 ELFDEIIKRKRFSEHDAARI-------IKQVFSGITY 136
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTD 66
+ + + + ++LA +D+ H +++RD+K EN+LLD++ +IKL+DFG +++ D
Sbjct: 127 FTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE----AID 182
Query: 67 YKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLK 126
+++ + +FCG+ Y +PE++ ++ +D WS GV++F M+ G LPF + E +
Sbjct: 183 HEKK-AYSFCGTVEYMAPEVVNRQGHS-HSADWWSYGVLMFEMLTGSLPFQGKDRKETMT 240
Query: 127 QVQK-RVVFPESPRLSSSCKALISNIL 152
+ K ++ P+ LS+ ++L+ +
Sbjct: 241 LILKAKLGMPQF--LSTEAQSLLRALF 265
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/83 (21%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 220 AIKIISKVQAPI-DYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSL 278
A+K++ K + D ++ + R+I + + HP +++ A +T ++Y+I+++ + G L
Sbjct: 60 AMKVLKKATLKVRDRVRTKMERDI--LADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDL 117
Query: 279 LEVIRKERYIDEDKALLCYSEVS 301
+ KE E+ +E++
Sbjct: 118 FTRLSKEVMFTEEDVKFYLAELA 140
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 15/177 (8%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDK---YNIKLSDFGFARKYSVNNTDYKQNLSET 74
Q+ I Y HK ++VHRDIK EN+LL++K NIK+ DFG + +S DYK L +
Sbjct: 154 QILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS---KDYK--LRDR 208
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKR--- 131
+Y Y +PE+LK ++ D+WS GV+++ ++ G PF N +++K+V+K
Sbjct: 209 LGTAY-YIAPEVLK--KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYY 265
Query: 132 VVFPESPRLSSSCKALISNILS-PVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEVG 187
F + +S K LI +L+ R E+ W+K+ +N + KS G
Sbjct: 266 FDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCG 322
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 48/121 (39%), Gaps = 16/121 (13%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQ----------APIDYLKKFLPREIEVVKGLKHP 251
+Y V L + AIK+I K Q I+ + + EI ++K L HP
Sbjct: 47 GAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHP 106
Query: 252 NLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNLSQTFSRCC 311
N+I+ E Y++ E+ + G L E I DE A + + Q S C
Sbjct: 107 NIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDA------ANIMKQILSGIC 160
Query: 312 Y 312
Y
Sbjct: 161 Y 161
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 85/164 (51%), Gaps = 21/164 (12%)
Query: 4 LLDYNTDK-------ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGF 56
L DY T+K R+ L + I HK ++VHRD+K EN+LLDD NIKL+DFGF
Sbjct: 111 LFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGF 170
Query: 57 ARKYSVNNTDYKQNLSETFCGSYAYASPEILK-----GVPYTPQQSDIWSMGVVLFAMVY 111
+ + D + L E CG+ +Y +PEI++ P ++ D+WS GV+++ ++
Sbjct: 171 SCQL-----DPGEKLREV-CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224
Query: 112 GRLPFDDTNYSELLKQVQK---RVVFPESPRLSSSCKALISNIL 152
G PF +L+ + + PE S + K L+S L
Sbjct: 225 GSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFL 268
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 96/179 (53%), Gaps = 25/179 (13%)
Query: 4 LLDYNTDK-------ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFG 55
L D+ T++ AR +F Q+ +A+ +CH V+HRDIK EN+L+D ++ +KL DFG
Sbjct: 130 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 189
Query: 56 FARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP 115
+ K + F G+ Y+ PE ++ Y + + +WS+G++L+ MV G +P
Sbjct: 190 -------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
Query: 116 FDDTNYSELLKQVQKRVVFPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKE 172
F+ + + +V F + R+S C+ LI L+ P R E+I+ PW+++
Sbjct: 243 FEHDE-----EIIGGQVFFRQ--RVSXECQHLIRWCLALRPSD-RPTFEEIQNHPWMQD 293
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 90/165 (54%), Gaps = 12/165 (7%)
Query: 14 RWFSQLADAIDYCHKKS-----VVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYK 68
R +QL A+ CH++S V+HRD+K N+ LD K N+KL DFG AR + N D
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR---ILNHD-- 169
Query: 69 QNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+ ++TF G+ Y SPE + + Y ++SDIWS+G +L+ + PF + EL ++
Sbjct: 170 TSFAKTFVGTPYYMSPEQMNRMSYN-EKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
Query: 129 QKRVVFPESPRLSSSCKALISNILSPVKF-RIQMEDIRQDPWLKE 172
++ R S +I+ +L+ + R +E+I ++P + E
Sbjct: 229 REGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 6/73 (8%)
Query: 235 KKFLPREIEVVKGLKHPNLIRFLQAI--ETTHRVYIIMEYAKNGSLLEVIRK----ERYI 288
K+ L E+ +++ LKHPN++R+ I T +YI+MEY + G L VI K +Y+
Sbjct: 49 KQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108
Query: 289 DEDKALLCYSEVS 301
DE+ L ++++
Sbjct: 109 DEEFVLRVMTQLT 121
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 96/179 (53%), Gaps = 25/179 (13%)
Query: 4 LLDYNTDK-------ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFG 55
L D+ T++ AR +F Q+ +A+ +CH V+HRDIK EN+L+D ++ +KL DFG
Sbjct: 130 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 189
Query: 56 FARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP 115
+ K + F G+ Y+ PE ++ Y + + +WS+G++L+ MV G +P
Sbjct: 190 -------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
Query: 116 FDDTNYSELLKQVQKRVVFPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKE 172
F+ + + +V F + R+S C+ LI L+ P R E+I+ PW+++
Sbjct: 243 FEHDE-----EIIGGQVFFRQ--RVSXECQHLIRWCLALRPSD-RPTFEEIQNHPWMQD 293
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 96/179 (53%), Gaps = 25/179 (13%)
Query: 4 LLDYNTDK-------ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFG 55
L D+ T++ AR +F Q+ +A+ +CH V+HRDIK EN+L+D ++ +KL DFG
Sbjct: 129 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 188
Query: 56 FARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP 115
+ K + F G+ Y+ PE ++ Y + + +WS+G++L+ MV G +P
Sbjct: 189 -------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
Query: 116 FDDTNYSELLKQVQKRVVFPESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKE 172
F+ + + +V F + R+S C+ LI L+ P R E+I+ PW+++
Sbjct: 242 FEHDE-----EIIGGQVFFRQ--RVSXECQHLIRWCLALRPSD-RPTFEEIQNHPWMQD 292
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 81/142 (57%), Gaps = 8/142 (5%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
+ ++ A+++ HK +++RDIK EN+LLD ++ L+DFG ++++ + T+ +
Sbjct: 164 YVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYD---- 219
Query: 75 FCGSYAYASPEILKGVPYTPQQS-DIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVV 133
FCG+ Y +P+I++G ++ D WS+GV+++ ++ G PF ++ +R++
Sbjct: 220 FCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL 279
Query: 134 FPESP---RLSSSCKALISNIL 152
E P +S+ K LI +L
Sbjct: 280 KSEPPYPQEMSALAKDLIQRLL 301
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 85/164 (51%), Gaps = 21/164 (12%)
Query: 4 LLDYNTDK-------ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGF 56
L DY T+K R+ L + I HK ++VHRD+K EN+LLDD NIKL+DFGF
Sbjct: 98 LFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGF 157
Query: 57 ARKYSVNNTDYKQNLSETFCGSYAYASPEILK-----GVPYTPQQSDIWSMGVVLFAMVY 111
+ + D + L E CG+ +Y +PEI++ P ++ D+WS GV+++ ++
Sbjct: 158 SCQ-----LDPGEKLREV-CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 211
Query: 112 GRLPFDDTNYSELLKQVQK---RVVFPESPRLSSSCKALISNIL 152
G PF +L+ + + PE S + K L+S L
Sbjct: 212 GSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFL 255
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
+AR + Q + Y H V+HRD+K NL L+D ++K+ DFG A K ++
Sbjct: 143 EARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATK-----IEFDGE 197
Query: 71 LSETFCGSYAYASPEIL--KGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+T CG+ Y +PE+L KG + + DIWS+G +L+ ++ G+ PF+ + E ++
Sbjct: 198 RKKTLCGTPNYIAPEVLCKKGHSF---EVDIWSLGCILYTLLVGKPPFETSCLKETYIRI 254
Query: 129 QK 130
+K
Sbjct: 255 KK 256
Score = 34.7 bits (78), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%)
Query: 220 AIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLL 279
A K++ K + K+ + EI + K L +P+++ F E VY+++E + SLL
Sbjct: 71 AGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLL 130
Query: 280 EVIRKERYIDEDKA 293
E+ ++ + + E +A
Sbjct: 131 ELHKRRKAVTEPEA 144
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 90/168 (53%), Gaps = 15/168 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKY---NIKLSDFGFARKYSVNNTDYK 68
A R Q+ I Y HK ++VHRD+K EN+LL+ K +IK+ DFG + + NT K
Sbjct: 123 AARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMK 181
Query: 69 QNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+ G+ Y +PE+L+G ++ D+WS GV+L+ ++ G PF N ++LK+V
Sbjct: 182 DRI-----GTAYYIAPEVLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234
Query: 129 Q-KRVVF--PESPRLSSSCKALISNILS-PVKFRIQMEDIRQDPWLKE 172
+ + F P+ +S K LI +L+ RI + PW+++
Sbjct: 235 ETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 217 QDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNG 276
Q+ A+K+I+K A L RE+E++K L HPN+++ + +E + YI+ E G
Sbjct: 48 QEYAVKVINKASAKNKDTSTIL-REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG 106
Query: 277 SLL-EVIRKERYIDEDKALLCYSEVSNLSQTFSRCCY 312
L E+I+++R+ + D A + + Q FS Y
Sbjct: 107 ELFDEIIKRKRFSEHDAARI-------IKQVFSGITY 136
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 90/165 (54%), Gaps = 12/165 (7%)
Query: 14 RWFSQLADAIDYCHKKS-----VVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYK 68
R +QL A+ CH++S V+HRD+K N+ LD K N+KL DFG AR + N D
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR---ILNHD-- 169
Query: 69 QNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
++ ++ F G+ Y SPE + + Y ++SDIWS+G +L+ + PF + EL ++
Sbjct: 170 EDFAKEFVGTPYYMSPEQMNRMSYN-EKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
Query: 129 QKRVVFPESPRLSSSCKALISNILSPVKF-RIQMEDIRQDPWLKE 172
++ R S +I+ +L+ + R +E+I ++P + E
Sbjct: 229 REGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 6/73 (8%)
Query: 235 KKFLPREIEVVKGLKHPNLIRFLQAI--ETTHRVYIIMEYAKNGSLLEVIRK----ERYI 288
K+ L E+ +++ LKHPN++R+ I T +YI+MEY + G L VI K +Y+
Sbjct: 49 KQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108
Query: 289 DEDKALLCYSEVS 301
DE+ L ++++
Sbjct: 109 DEEFVLRVMTQLT 121
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 80/139 (57%), Gaps = 6/139 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q A +DY H KS++HRD+K N+ L + +K+ DFG A + S + ++ E G
Sbjct: 128 QTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ---FEQLSG 184
Query: 78 SYAYASPEILKGVPYTPQ--QSDIWSMGVVLFAMVYGRLPFDD-TNYSELLKQVQKRVVF 134
S + +PE+++ P QSD+++ G+VL+ ++ G+LP+ + N ++++ V + +
Sbjct: 185 SILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLS 244
Query: 135 PESPRLSSSCKALISNILS 153
P+ ++ S+C + +++
Sbjct: 245 PDLSKVRSNCPKRMKRLMA 263
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 85/164 (51%), Gaps = 21/164 (12%)
Query: 4 LLDYNTDK-------ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGF 56
L DY T+K R+ L + I HK ++VHRD+K EN+LLDD NIKL+DFGF
Sbjct: 111 LFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGF 170
Query: 57 ARKYSVNNTDYKQNLSETFCGSYAYASPEILK-----GVPYTPQQSDIWSMGVVLFAMVY 111
+ + D + L + CG+ +Y +PEI++ P ++ D+WS GV+++ ++
Sbjct: 171 SCQL-----DPGEKL-RSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224
Query: 112 GRLPFDDTNYSELLKQVQK---RVVFPESPRLSSSCKALISNIL 152
G PF +L+ + + PE S + K L+S L
Sbjct: 225 GSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFL 268
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 80/139 (57%), Gaps = 6/139 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q A +DY H KS++HRD+K N+ L + +K+ DFG A + S + ++ E G
Sbjct: 128 QTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ---FEQLSG 184
Query: 78 SYAYASPEILKGVPYTPQ--QSDIWSMGVVLFAMVYGRLPFDD-TNYSELLKQVQKRVVF 134
S + +PE+++ P QSD+++ G+VL+ ++ G+LP+ + N ++++ V + +
Sbjct: 185 SILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLS 244
Query: 135 PESPRLSSSCKALISNILS 153
P+ ++ S+C + +++
Sbjct: 245 PDLSKVRSNCPKRMKRLMA 263
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 87/163 (53%), Gaps = 17/163 (10%)
Query: 16 FSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVNNTDYKQNLS 72
Q+ Y HK ++VHRD+K ENLLL+ K IK+ DFG + + V K+ L
Sbjct: 110 MKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK-MKERL- 167
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQK-R 131
G+ Y +PE+L+ ++ D+WS GV+L+ ++ G PF E+LK+V+K +
Sbjct: 168 ----GTAYYIAPEVLR--KKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGK 221
Query: 132 VVF--PESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWL 170
F P+ ++S K L+ +L+ P K RI E+ PW+
Sbjct: 222 FSFDPPDWTQVSDEAKQLVKLMLTYEPSK-RISAEEALNHPWI 263
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V L + AIKII K L E+ V+K L HPN+++ + E
Sbjct: 15 GAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFE 74
Query: 262 TTHRVYIIMEYAKNGSLL-EVIRKERYIDEDKALL 295
Y++ME + G L E+I ++++ + D A++
Sbjct: 75 DKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVI 109
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 87/161 (54%), Gaps = 17/161 (10%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVNNTDYKQNLSET 74
Q+ Y HK ++VHRD+K ENLLL+ K IK+ DFG + + V K+ L
Sbjct: 129 QVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK-MKERL--- 184
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQK-RVV 133
G+ Y +PE+L+ ++ D+WS GV+L+ ++ G PF E+LK+V+K +
Sbjct: 185 --GTAYYIAPEVLR--KKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFS 240
Query: 134 F--PESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWL 170
F P+ ++S K L+ +L+ P K RI E+ PW+
Sbjct: 241 FDPPDWTQVSDEAKQLVKLMLTYEPSK-RISAEEALNHPWI 280
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V L + AIKII K L E+ V+K L HPN+++ + E
Sbjct: 32 GAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFE 91
Query: 262 TTHRVYIIMEYAKNGSLL-EVIRKERYIDEDKALL 295
Y++ME + G L E+I ++++ + D A++
Sbjct: 92 DKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVI 126
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 82/141 (58%), Gaps = 7/141 (4%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
R + +++ A++Y H K ++HRD+K EN+LL++ +I+++DFG A+ V + + KQ +
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARA 191
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTN-YSELLKQVQKR 131
+F G+ Y SPE+L + + SD+W++G +++ +V G PF N Y K ++
Sbjct: 192 NSFVGTAQYVSPELLTEKSAS-KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 250
Query: 132 VVFPESPRLSSSCKALISNIL 152
FPE + + L+ +L
Sbjct: 251 YDFPE--KFFPKARDLVEKLL 269
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S++TV LA S++ AIKI+ K + ++ RE +V+ L HP ++ +
Sbjct: 43 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 102
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDE 290
++Y + YAKNG LL+ IRK DE
Sbjct: 103 DDEKLYFGLSYAKNGCLLKYIRKIGSFDE 131
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 89/165 (53%), Gaps = 12/165 (7%)
Query: 14 RWFSQLADAIDYCHKKS-----VVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYK 68
R +QL A+ CH++S V+HRD+K N+ LD K N+KL DFG AR + N D
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR---ILNHD-- 169
Query: 69 QNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+ ++ F G+ Y SPE + + Y ++SDIWS+G +L+ + PF + EL ++
Sbjct: 170 TSFAKAFVGTPYYMSPEQMNRMSYN-EKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
Query: 129 QKRVVFPESPRLSSSCKALISNILSPVKF-RIQMEDIRQDPWLKE 172
++ R S +I+ +L+ + R +E+I ++P + E
Sbjct: 229 REGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 6/73 (8%)
Query: 235 KKFLPREIEVVKGLKHPNLIRFLQAI--ETTHRVYIIMEYAKNGSLLEVIRK----ERYI 288
K+ L E+ +++ LKHPN++R+ I T +YI+MEY + G L VI K +Y+
Sbjct: 49 KQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108
Query: 289 DEDKALLCYSEVS 301
DE+ L ++++
Sbjct: 109 DEEFVLRVMTQLT 121
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 79/139 (56%), Gaps = 6/139 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q A +DY H KS++HRD+K N+ L + +K+ DFG A + S + ++ E G
Sbjct: 140 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQ---FEQLSG 196
Query: 78 SYAYASPEILKGVPYTPQ--QSDIWSMGVVLFAMVYGRLPFDD-TNYSELLKQVQKRVVF 134
S + +PE+++ P QSD+++ G+VL+ ++ G+LP+ + N +++ V + +
Sbjct: 197 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 256
Query: 135 PESPRLSSSCKALISNILS 153
P+ ++ S+C + +++
Sbjct: 257 PDLSKVRSNCPKAMKRLMA 275
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
+AR + Q+ Y H+ V+HRD+K NL L++ +K+ DFG A K +Y
Sbjct: 118 EARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK-----VEYDGE 172
Query: 71 LSETFCGSYAYASPEIL--KGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+T CG+ Y +PE+L KG + + D+WS+G +++ ++ G+ PF+ + E ++
Sbjct: 173 RKKTLCGTPNYIAPEVLSKKGHSF---EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI 229
Query: 129 QK 130
+K
Sbjct: 230 KK 231
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 39/74 (52%)
Query: 220 AIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLL 279
A KI+ K + ++ + EI + + L H +++ F E V++++E + SLL
Sbjct: 46 AGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLL 105
Query: 280 EVIRKERYIDEDKA 293
E+ ++ + + E +A
Sbjct: 106 ELHKRRKALTEPEA 119
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 79/139 (56%), Gaps = 6/139 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q A +DY H KS++HRD+K N+ L + +K+ DFG A + S + ++ E G
Sbjct: 132 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQ---FEQLSG 188
Query: 78 SYAYASPEILKGVPYTPQ--QSDIWSMGVVLFAMVYGRLPFDD-TNYSELLKQVQKRVVF 134
S + +PE+++ P QSD+++ G+VL+ ++ G+LP+ + N +++ V + +
Sbjct: 189 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 248
Query: 135 PESPRLSSSCKALISNILS 153
P+ ++ S+C + +++
Sbjct: 249 PDLSKVRSNCPKAMKRLMA 267
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
+AR + Q+ Y H+ V+HRD+K NL L++ +K+ DFG A K +Y
Sbjct: 122 EARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK-----VEYDGE 176
Query: 71 LSETFCGSYAYASPEIL--KGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+T CG+ Y +PE+L KG + + D+WS+G +++ ++ G+ PF+ + E ++
Sbjct: 177 RKKTLCGTPNYIAPEVLSKKGHSF---EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI 233
Query: 129 QK 130
+K
Sbjct: 234 KK 235
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 39/74 (52%)
Query: 220 AIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLL 279
A KI+ K + ++ + EI + + L H +++ F E V++++E + SLL
Sbjct: 50 AGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLL 109
Query: 280 EVIRKERYIDEDKA 293
E+ ++ + + E +A
Sbjct: 110 ELHKRRKALTEPEA 123
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
+AR + Q+ Y H+ V+HRD+K NL L++ +K+ DFG A K +Y
Sbjct: 118 EARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK-----VEYDGE 172
Query: 71 LSETFCGSYAYASPEIL--KGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+T CG+ Y +PE+L KG + + D+WS+G +++ ++ G+ PF+ + E ++
Sbjct: 173 RKKTLCGTPNYIAPEVLSKKGHSF---EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI 229
Query: 129 QK 130
+K
Sbjct: 230 KK 231
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 39/74 (52%)
Query: 220 AIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLL 279
A KI+ K + ++ + EI + + L H +++ F E V++++E + SLL
Sbjct: 46 AGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLL 105
Query: 280 EVIRKERYIDEDKA 293
E+ ++ + + E +A
Sbjct: 106 ELHKRRKALTEPEA 119
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 79/139 (56%), Gaps = 6/139 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q A +DY H KS++HRD+K N+ L + +K+ DFG A + S + ++ E G
Sbjct: 112 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQ---FEQLSG 168
Query: 78 SYAYASPEILKGVPYTPQ--QSDIWSMGVVLFAMVYGRLPFDD-TNYSELLKQVQKRVVF 134
S + +PE+++ P QSD+++ G+VL+ ++ G+LP+ + N +++ V + +
Sbjct: 169 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 228
Query: 135 PESPRLSSSCKALISNILS 153
P+ ++ S+C + +++
Sbjct: 229 PDLSKVRSNCPKAMKRLMA 247
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 80/141 (56%), Gaps = 7/141 (4%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
R + +++ A++Y H K ++HRD+K EN+LL++ +I+++DFG A+ V + + KQ +
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARA 191
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQK-R 131
F G+ Y SPE+L + SD+W++G +++ +V G PF N + ++ K
Sbjct: 192 NXFVGTAQYVSPELLT-EKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLE 250
Query: 132 VVFPESPRLSSSCKALISNIL 152
FPE + + L+ +L
Sbjct: 251 YDFPE--KFFPKARDLVEKLL 269
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S++TV LA S++ AIKI+ K + ++ RE +V+ L HP ++ +
Sbjct: 43 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 102
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDE 290
++Y + YAKNG LL+ IRK DE
Sbjct: 103 DDEKLYFGLSYAKNGELLKYIRKIGSFDE 131
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 70/122 (57%), Gaps = 10/122 (8%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
+AR + Q + Y H V+HRD+K NL L+D ++K+ DFG A K + + K++
Sbjct: 143 EARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG-ERKKD 201
Query: 71 LSETFCGSYAYASPEIL--KGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
L CG+ Y +PE+L KG + + DIWS+G +L+ ++ G+ PF+ + E ++
Sbjct: 202 L----CGTPNYIAPEVLCKKGHSF---EVDIWSLGCILYTLLVGKPPFETSCLKETYIRI 254
Query: 129 QK 130
+K
Sbjct: 255 KK 256
Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%)
Query: 220 AIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLL 279
A K++ K + K+ + EI + K L +P+++ F E VY+++E + SLL
Sbjct: 71 AGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLL 130
Query: 280 EVIRKERYIDEDKA 293
E+ ++ + + E +A
Sbjct: 131 ELHKRRKAVTEPEA 144
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 67/122 (54%), Gaps = 10/122 (8%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
+AR + Q + Y H V+HRD+K NL L+D ++K+ DFG A K ++
Sbjct: 143 EARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATK-----IEFDGE 197
Query: 71 LSETFCGSYAYASPEIL--KGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+ CG+ Y +PE+L KG + + DIWS+G +L+ ++ G+ PF+ + E ++
Sbjct: 198 RKKXLCGTPNYIAPEVLCKKGHSF---EVDIWSLGCILYTLLVGKPPFETSCLKETYIRI 254
Query: 129 QK 130
+K
Sbjct: 255 KK 256
Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%)
Query: 220 AIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLL 279
A K++ K + K+ + EI + K L +P+++ F E VY+++E + SLL
Sbjct: 71 AGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLL 130
Query: 280 EVIRKERYIDEDKA 293
E+ ++ + + E +A
Sbjct: 131 ELHKRRKAVTEPEA 144
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 79/139 (56%), Gaps = 6/139 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q A +DY H KS++HRD+K N+ L + +K+ DFG A +V + + E G
Sbjct: 116 QTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA---TVKSRWSGSHQFEQLSG 172
Query: 78 SYAYASPEILKGVPYTPQ--QSDIWSMGVVLFAMVYGRLPFDD-TNYSELLKQVQKRVVF 134
S + +PE+++ P QSD+++ G+VL+ ++ G+LP+ + N ++++ V + +
Sbjct: 173 SILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLS 232
Query: 135 PESPRLSSSCKALISNILS 153
P+ ++ S+C + +++
Sbjct: 233 PDLSKVRSNCPKRMKRLMA 251
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 70/122 (57%), Gaps = 10/122 (8%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
+AR + Q + Y H V+HRD+K NL L+D ++K+ DFG A K + + K++
Sbjct: 127 EARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG-ERKKD 185
Query: 71 LSETFCGSYAYASPEIL--KGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
L CG+ Y +PE+L KG + + DIWS+G +L+ ++ G+ PF+ + E ++
Sbjct: 186 L----CGTPNYIAPEVLCKKGHSF---EVDIWSLGCILYTLLVGKPPFETSCLKETYIRI 238
Query: 129 QK 130
+K
Sbjct: 239 KK 240
Score = 34.7 bits (78), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%)
Query: 220 AIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLL 279
A K++ K + K+ + EI + K L +P+++ F E VY+++E + SLL
Sbjct: 55 AGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLL 114
Query: 280 EVIRKERYIDEDKA 293
E+ ++ + + E +A
Sbjct: 115 ELHKRRKAVTEPEA 128
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 85/147 (57%), Gaps = 9/147 (6%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTD 66
+ D A + ++++ A+ + H+K +++RD+K EN++L+ + ++KL+DFG ++ + T
Sbjct: 118 FMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT- 176
Query: 67 YKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLK 126
++ TFCG+ Y +PEIL + + D WS+G +++ M+ G PF N + +
Sbjct: 177 ----VTHTFCGTIEYMAPEILMRSGHN-RAVDWWSLGALMYDMLTGAPPFTGENRKKTID 231
Query: 127 QVQK-RVVFPESPRLSSSCKALISNIL 152
++ K ++ P P L+ + L+ +L
Sbjct: 232 KILKCKLNLP--PYLTQEARDLLKKLL 256
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 207 VKLATSARHSQDVAIKIISK---VQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETT 263
V+ T A + A+K++ K V+ D R I ++ +KHP ++ + A +T
Sbjct: 36 VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNI--LEEVKHPFIVDLIYAFQTG 93
Query: 264 HRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVS 301
++Y+I+EY G L + +E ED A +E+S
Sbjct: 94 GKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEIS 131
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 78/139 (56%), Gaps = 6/139 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q A +DY H KS++HRD+K N+ L + +K+ DFG A +V + + E G
Sbjct: 139 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA---TVKSRWSGSHQFEQLSG 195
Query: 78 SYAYASPEILKGVPYTPQ--QSDIWSMGVVLFAMVYGRLPFDD-TNYSELLKQVQKRVVF 134
S + +PE+++ P QSD+++ G+VL+ ++ G+LP+ + N +++ V + +
Sbjct: 196 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 255
Query: 135 PESPRLSSSCKALISNILS 153
P+ ++ S+C + +++
Sbjct: 256 PDLSKVRSNCPKAMKRLMA 274
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 78/139 (56%), Gaps = 6/139 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q A +DY H KS++HRD+K N+ L + +K+ DFG A +V + + E G
Sbjct: 140 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA---TVKSRWSGSHQFEQLSG 196
Query: 78 SYAYASPEILKGVPYTPQ--QSDIWSMGVVLFAMVYGRLPFDD-TNYSELLKQVQKRVVF 134
S + +PE+++ P QSD+++ G+VL+ ++ G+LP+ + N +++ V + +
Sbjct: 197 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 256
Query: 135 PESPRLSSSCKALISNILS 153
P+ ++ S+C + +++
Sbjct: 257 PDLSKVRSNCPKAMKRLMA 275
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 81/141 (57%), Gaps = 7/141 (4%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
R + +++ A++Y H K ++HRD+K EN+LL++ +I+++DFG A+ V + + KQ +
Sbjct: 136 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARA 192
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTN-YSELLKQVQKR 131
+F G+ Y SPE+L + SD+W++G +++ +V G PF N Y K ++
Sbjct: 193 NSFVGTAQYVSPELLTEKSAC-KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 251
Query: 132 VVFPESPRLSSSCKALISNIL 152
FPE + + L+ +L
Sbjct: 252 YDFPE--KFFPKARDLVEKLL 270
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S++TV LA S++ AIKI+ K + ++ RE +V+ L HP ++ +
Sbjct: 44 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 103
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDE 290
++Y + YAKNG LL+ IRK DE
Sbjct: 104 DDEKLYFGLSYAKNGELLKYIRKIGSFDE 132
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 81/142 (57%), Gaps = 7/142 (4%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
R + +++ A++Y H K ++HRD+K EN+LL++ +I+++DFG A+ V + + KQ
Sbjct: 131 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQAR 187
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTN-YSELLKQVQK 130
+ +F G+ Y SPE+L + SD+W++G +++ +V G PF N Y K ++
Sbjct: 188 ANSFVGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 246
Query: 131 RVVFPESPRLSSSCKALISNIL 152
FPE + + L+ +L
Sbjct: 247 EYDFPE--KFFPKARDLVEKLL 266
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S++TV LA S++ AIKI+ K + ++ RE +V+ L HP ++ +
Sbjct: 40 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 99
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDE 290
++Y + YAKNG LL+ IRK DE
Sbjct: 100 DDEKLYFGLSYAKNGELLKYIRKIGSFDE 128
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 78/139 (56%), Gaps = 6/139 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q A +DY H KS++HRD+K N+ L + +K+ DFG A +V + + E G
Sbjct: 114 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA---TVKSRWSGSHQFEQLSG 170
Query: 78 SYAYASPEILKGVPYTPQ--QSDIWSMGVVLFAMVYGRLPFDD-TNYSELLKQVQKRVVF 134
S + +PE+++ P QSD+++ G+VL+ ++ G+LP+ + N +++ V + +
Sbjct: 171 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 230
Query: 135 PESPRLSSSCKALISNILS 153
P+ ++ S+C + +++
Sbjct: 231 PDLSKVRSNCPKAMKRLMA 249
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 78/139 (56%), Gaps = 6/139 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q A +DY H KS++HRD+K N+ L + +K+ DFG A +V + + E G
Sbjct: 117 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA---TVKSRWSGSHQFEQLSG 173
Query: 78 SYAYASPEILKGVPYTPQ--QSDIWSMGVVLFAMVYGRLPFDD-TNYSELLKQVQKRVVF 134
S + +PE+++ P QSD+++ G+VL+ ++ G+LP+ + N +++ V + +
Sbjct: 174 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 233
Query: 135 PESPRLSSSCKALISNILS 153
P+ ++ S+C + +++
Sbjct: 234 PDLSKVRSNCPKAMKRLMA 252
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 74/125 (59%), Gaps = 5/125 (4%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
R + +++ A++Y H K ++HRD+K EN+LL++ +I+++DFG A+ V + + KQ +
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARA 191
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQK-R 131
F G+ Y SPE+L + SD+W++G +++ +V G PF N + ++ K
Sbjct: 192 NXFVGTAQYVSPELLTEKSAC-KSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLE 250
Query: 132 VVFPE 136
FPE
Sbjct: 251 YDFPE 255
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S++TV LA S++ AIKI+ K + ++ RE +V+ L HP ++ +
Sbjct: 43 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 102
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDE 290
++Y + YAKNG LL+ IRK DE
Sbjct: 103 DDEKLYFGLSYAKNGELLKYIRKIGSFDE 131
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 78/139 (56%), Gaps = 6/139 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q A +DY H KS++HRD+K N+ L + +K+ DFG A +V + + E G
Sbjct: 112 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA---TVKSRWSGSHQFEQLSG 168
Query: 78 SYAYASPEILKGVPYTPQ--QSDIWSMGVVLFAMVYGRLPFDD-TNYSELLKQVQKRVVF 134
S + +PE+++ P QSD+++ G+VL+ ++ G+LP+ + N +++ V + +
Sbjct: 169 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 228
Query: 135 PESPRLSSSCKALISNILS 153
P+ ++ S+C + +++
Sbjct: 229 PDLSKVRSNCPKAMKRLMA 247
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 78/139 (56%), Gaps = 6/139 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q A +DY H KS++HRD+K N+ L + +K+ DFG A +V + + E G
Sbjct: 112 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA---TVKSRWSGSHQFEQLSG 168
Query: 78 SYAYASPEILKGVPYTPQ--QSDIWSMGVVLFAMVYGRLPFDD-TNYSELLKQVQKRVVF 134
S + +PE+++ P QSD+++ G+VL+ ++ G+LP+ + N +++ V + +
Sbjct: 169 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 228
Query: 135 PESPRLSSSCKALISNILS 153
P+ ++ S+C + +++
Sbjct: 229 PDLSKVRSNCPKAMKRLMA 247
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 78/139 (56%), Gaps = 6/139 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q A +DY H KS++HRD+K N+ L + +K+ DFG A +V + + E G
Sbjct: 117 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA---TVKSRWSGSHQFEQLSG 173
Query: 78 SYAYASPEILKGVPYTPQ--QSDIWSMGVVLFAMVYGRLPFDD-TNYSELLKQVQKRVVF 134
S + +PE+++ P QSD+++ G+VL+ ++ G+LP+ + N +++ V + +
Sbjct: 174 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 233
Query: 135 PESPRLSSSCKALISNILS 153
P+ ++ S+C + +++
Sbjct: 234 PDLSKVRSNCPKAMKRLMA 252
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 94/174 (54%), Gaps = 19/174 (10%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +++ A+D H +HRD+K +N+LLD ++KL+DFG K + K+ +
Sbjct: 175 ARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN------KEGM 228
Query: 72 --SETFCGSYAYASPEILK---GVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDT---NYS 122
+T G+ Y SPE+LK G Y ++ D WS+GV L+ M+ G PF D+ YS
Sbjct: 229 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS 288
Query: 123 ELLKQVQKRVVFPESPRLSSSCKALISNILSPVKFRI---QMEDIRQDPWLKED 173
+++ + + FP+ +S K LI L+ + R+ +E+I++ + K D
Sbjct: 289 KIMNH-KNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 341
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/81 (19%), Positives = 37/81 (45%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
++ V+L + A+K++SK + F E +++ P +++ A +
Sbjct: 85 GAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ 144
Query: 262 TTHRVYIIMEYAKNGSLLEVI 282
+Y++MEY G L+ ++
Sbjct: 145 DDRYLYMVMEYMPGGDLVNLM 165
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 80/141 (56%), Gaps = 7/141 (4%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
R + +++ A++Y H K ++HRD+K EN+LL++ +I+++DFG A+ V + + KQ +
Sbjct: 133 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARA 189
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTN-YSELLKQVQKR 131
F G+ Y SPE+L + SD+W++G +++ +V G PF N Y K ++
Sbjct: 190 NAFVGTAQYVSPELLTEKSAC-KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 248
Query: 132 VVFPESPRLSSSCKALISNIL 152
FPE + + L+ +L
Sbjct: 249 YDFPE--KFFPKARDLVEKLL 267
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S++TV LA S++ AIKI+ K + ++ RE +V+ L HP ++ +
Sbjct: 41 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 100
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDE 290
++Y + YAKNG LL+ IRK DE
Sbjct: 101 DDEKLYFGLSYAKNGELLKYIRKIGSFDE 129
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 94/174 (54%), Gaps = 19/174 (10%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +++ A+D H +HRD+K +N+LLD ++KL+DFG K + K+ +
Sbjct: 175 ARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN------KEGM 228
Query: 72 --SETFCGSYAYASPEILK---GVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDT---NYS 122
+T G+ Y SPE+LK G Y ++ D WS+GV L+ M+ G PF D+ YS
Sbjct: 229 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS 288
Query: 123 ELLKQVQKRVVFPESPRLSSSCKALISNILSPVKFRI---QMEDIRQDPWLKED 173
+++ + + FP+ +S K LI L+ + R+ +E+I++ + K D
Sbjct: 289 KIMNH-KNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 341
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/81 (19%), Positives = 37/81 (45%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
++ V+L + A+K++SK + F E +++ P +++ A +
Sbjct: 85 GAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ 144
Query: 262 TTHRVYIIMEYAKNGSLLEVI 282
+Y++MEY G L+ ++
Sbjct: 145 DDRYLYMVMEYMPGGDLVNLM 165
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 80/142 (56%), Gaps = 7/142 (4%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
R + +++ A++Y H K ++HRD+K EN+LL++ +I+++DFG A+ V + + KQ
Sbjct: 112 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQAR 168
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTN-YSELLKQVQK 130
+ F G+ Y SPE+L + SD+W++G +++ +V G PF N Y K ++
Sbjct: 169 ANXFVGTAQYVSPELLTEKSAC-KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 227
Query: 131 RVVFPESPRLSSSCKALISNIL 152
FPE + + L+ +L
Sbjct: 228 EYDFPE--KFFPKARDLVEKLL 247
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S++TV LA S++ AIKI+ K + ++ RE +V+ L HP ++ +
Sbjct: 21 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 80
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDE 290
++Y + YAKNG LL+ IRK DE
Sbjct: 81 DDEKLYFGLSYAKNGELLKYIRKIGSFDE 109
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 94/174 (54%), Gaps = 19/174 (10%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +++ A+D H +HRD+K +N+LLD ++KL+DFG K + K+ +
Sbjct: 170 ARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN------KEGM 223
Query: 72 --SETFCGSYAYASPEILK---GVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDT---NYS 122
+T G+ Y SPE+LK G Y ++ D WS+GV L+ M+ G PF D+ YS
Sbjct: 224 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS 283
Query: 123 ELLKQVQKRVVFPESPRLSSSCKALISNILSPVKFRI---QMEDIRQDPWLKED 173
+++ + + FP+ +S K LI L+ + R+ +E+I++ + K D
Sbjct: 284 KIMNH-KNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 336
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/81 (19%), Positives = 37/81 (45%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
++ V+L + A+K++SK + F E +++ P +++ A +
Sbjct: 80 GAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ 139
Query: 262 TTHRVYIIMEYAKNGSLLEVI 282
+Y++MEY G L+ ++
Sbjct: 140 DDRYLYMVMEYMPGGDLVNLM 160
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 80/141 (56%), Gaps = 7/141 (4%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
R + +++ A++Y H K ++HRD+K EN+LL++ +I+++DFG A+ V + + KQ +
Sbjct: 136 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARA 192
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTN-YSELLKQVQKR 131
F G+ Y SPE+L + SD+W++G +++ +V G PF N Y K ++
Sbjct: 193 NXFVGTAQYVSPELLTEKSAC-KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 251
Query: 132 VVFPESPRLSSSCKALISNIL 152
FPE + + L+ +L
Sbjct: 252 YDFPE--KFFPKARDLVEKLL 270
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S++TV LA S++ AIKI+ K + ++ RE +V+ L HP ++ +
Sbjct: 44 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 103
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDE 290
++Y + YAKNG LL+ IRK DE
Sbjct: 104 DDEKLYFGLSYAKNGELLKYIRKIGSFDE 132
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 80/141 (56%), Gaps = 7/141 (4%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
R + +++ A++Y H K ++HRD+K EN+LL++ +I+++DFG A+ V + + KQ +
Sbjct: 133 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARA 189
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTN-YSELLKQVQKR 131
F G+ Y SPE+L + SD+W++G +++ +V G PF N Y K ++
Sbjct: 190 NXFVGTAQYVSPELLTEKSAC-KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 248
Query: 132 VVFPESPRLSSSCKALISNIL 152
FPE + + L+ +L
Sbjct: 249 YDFPE--KFFPKARDLVEKLL 267
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S++T LA S++ AIKI+ K + ++ RE +V+ L HP ++ +
Sbjct: 41 GSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 100
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDE 290
++Y + YAKNG LL+ IRK DE
Sbjct: 101 DDEKLYFGLSYAKNGELLKYIRKIGSFDE 129
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 80/141 (56%), Gaps = 7/141 (4%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
R + +++ A++Y H K ++HRD+K EN+LL++ +I+++DFG A+ V + + KQ +
Sbjct: 133 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARA 189
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTN-YSELLKQVQKR 131
F G+ Y SPE+L + SD+W++G +++ +V G PF N Y K ++
Sbjct: 190 NXFVGTAQYVSPELLTEKSAC-KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 248
Query: 132 VVFPESPRLSSSCKALISNIL 152
FPE + + L+ +L
Sbjct: 249 YDFPE--KFFPKARDLVEKLL 267
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S++TV LA S++ AIKI+ K + ++ RE +V+ L HP ++ +
Sbjct: 41 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 100
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDE 290
++Y + YAKNG LL+ IRK DE
Sbjct: 101 DDEKLYFGLSYAKNGELLKYIRKIGSFDE 129
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 80/142 (56%), Gaps = 7/142 (4%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
R + +++ A++Y H K ++HRD+K EN+LL++ +I+++DFG A+ V + + KQ
Sbjct: 109 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQAR 165
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTN-YSELLKQVQK 130
+ F G+ Y SPE+L + SD+W++G +++ +V G PF N Y K ++
Sbjct: 166 ANXFVGTAQYVSPELLTEKSAC-KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 224
Query: 131 RVVFPESPRLSSSCKALISNIL 152
FPE + + L+ +L
Sbjct: 225 EYDFPE--KFFPKARDLVEKLL 244
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S++TV LA S++ AIKI+ K + ++ RE +V+ L HP ++ +
Sbjct: 18 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 77
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDE 290
++Y + YAKNG LL+ IRK DE
Sbjct: 78 DDEKLYFGLSYAKNGELLKYIRKIGSFDE 106
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 80/141 (56%), Gaps = 7/141 (4%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
R + +++ A++Y H K ++HRD+K EN+LL++ +I+++DFG A+ V + + KQ +
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARA 191
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTN-YSELLKQVQKR 131
F G+ Y SPE+L + SD+W++G +++ +V G PF N Y K ++
Sbjct: 192 NXFVGTAQYVSPELLTEKSAC-KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 250
Query: 132 VVFPESPRLSSSCKALISNIL 152
FPE + + L+ +L
Sbjct: 251 YDFPE--KFFPKARDLVEKLL 269
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S++TV LA S++ AIKI+ K + ++ RE +V+ L HP ++ +
Sbjct: 43 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 102
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDE 290
++Y + YAKNG LL+ IRK DE
Sbjct: 103 DDEKLYFGLSYAKNGELLKYIRKIGSFDE 131
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 80/141 (56%), Gaps = 7/141 (4%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
R + +++ A++Y H K ++HRD+K EN+LL++ +I+++DFG A+ V + + KQ +
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARA 191
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTN-YSELLKQVQKR 131
F G+ Y SPE+L + SD+W++G +++ +V G PF N Y K ++
Sbjct: 192 NXFVGTAQYVSPELLTEKSAC-KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 250
Query: 132 VVFPESPRLSSSCKALISNIL 152
FPE + + L+ +L
Sbjct: 251 YDFPE--KFFPKARDLVEKLL 269
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S++TV LA S++ AIKI+ K + ++ RE +V+ L HP ++ +
Sbjct: 43 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 102
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDE 290
++Y + YAKNG LL+ IRK DE
Sbjct: 103 DDEKLYFGLSYAKNGELLKYIRKIGSFDE 131
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 80/141 (56%), Gaps = 7/141 (4%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
R + +++ A++Y H K ++HRD+K EN+LL++ +I+++DFG A+ V + + KQ +
Sbjct: 133 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARA 189
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTN-YSELLKQVQKR 131
F G+ Y SPE+L + SD+W++G +++ +V G PF N Y K ++
Sbjct: 190 NXFVGTAQYVSPELLTEKSAC-KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 248
Query: 132 VVFPESPRLSSSCKALISNIL 152
FPE + + L+ +L
Sbjct: 249 YDFPE--KFFPKARDLVEKLL 267
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S++TV LA S++ AIKI+ K + ++ RE +V+ L HP ++ +
Sbjct: 41 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 100
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDE 290
++Y + YAKNG LL+ IRK DE
Sbjct: 101 DDEKLYFGLSYAKNGELLKYIRKIGSFDE 129
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 80/141 (56%), Gaps = 7/141 (4%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
R + +++ A++Y H K ++HRD+K EN+LL++ +I+++DFG A+ V + + KQ +
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARA 191
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTN-YSELLKQVQKR 131
F G+ Y SPE+L + SD+W++G +++ +V G PF N Y K ++
Sbjct: 192 NXFVGTAQYVSPELLTEKSAC-KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 250
Query: 132 VVFPESPRLSSSCKALISNIL 152
FPE + + L+ +L
Sbjct: 251 YDFPE--KFFPKARDLVEKLL 269
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S++TV LA S++ AIKI+ K + ++ RE +V+ L HP ++ +
Sbjct: 43 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 102
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDE 290
++Y + YAKNG LL+ IRK DE
Sbjct: 103 DDEKLYFGLSYAKNGELLKYIRKIGSFDE 131
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 80/142 (56%), Gaps = 7/142 (4%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
R + +++ A++Y H K ++HRD+K EN+LL++ +I+++DFG A+ V + + KQ
Sbjct: 110 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQAR 166
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTN-YSELLKQVQK 130
+ F G+ Y SPE+L + SD+W++G +++ +V G PF N Y K ++
Sbjct: 167 ANXFVGTAQYVSPELLTEKSAC-KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 225
Query: 131 RVVFPESPRLSSSCKALISNIL 152
FPE + + L+ +L
Sbjct: 226 EYDFPE--KFFPKARDLVEKLL 245
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S++TV LA S++ AIKI+ K + ++ RE +V+ L HP ++ +
Sbjct: 19 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 78
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDE 290
++Y + YAKNG LL+ IRK DE
Sbjct: 79 DDEKLYFGLSYAKNGELLKYIRKIGSFDE 107
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 80/142 (56%), Gaps = 7/142 (4%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
R + +++ A++Y H K ++HRD+K EN+LL++ +I+++DFG A+ V + + KQ
Sbjct: 111 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQAR 167
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTN-YSELLKQVQK 130
+ F G+ Y SPE+L + SD+W++G +++ +V G PF N Y K ++
Sbjct: 168 ANXFVGTAQYVSPELLTEKSAC-KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 226
Query: 131 RVVFPESPRLSSSCKALISNIL 152
FPE + + L+ +L
Sbjct: 227 EYDFPE--KFFPKARDLVEKLL 246
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S++TV LA S++ AIKI+ K + ++ RE +V+ L HP ++ +
Sbjct: 20 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 79
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDE 290
++Y + YAKNG LL+ IRK DE
Sbjct: 80 DDEKLYFGLSYAKNGELLKYIRKIGSFDE 108
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 80/142 (56%), Gaps = 7/142 (4%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
R + +++ A++Y H K ++HRD+K EN+LL++ +I+++DFG A+ V + + KQ
Sbjct: 116 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQAR 172
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTN-YSELLKQVQK 130
+ F G+ Y SPE+L + SD+W++G +++ +V G PF N Y K ++
Sbjct: 173 ANXFVGTAQYVSPELLTEKSAC-KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 231
Query: 131 RVVFPESPRLSSSCKALISNIL 152
FPE + + L+ +L
Sbjct: 232 EYDFPE--KFFPKARDLVEKLL 251
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S++TV LA S++ AIKI+ K + ++ RE +V+ L HP ++ +
Sbjct: 25 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 84
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDE 290
++Y + YAKNG LL+ IRK DE
Sbjct: 85 DDEKLYFGLSYAKNGELLKYIRKIGSFDE 113
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 80/142 (56%), Gaps = 7/142 (4%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
R + +++ A++Y H K ++HRD+K EN+LL++ +I+++DFG A+ V + + KQ
Sbjct: 131 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQAR 187
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTN-YSELLKQVQK 130
+ F G+ Y SPE+L + SD+W++G +++ +V G PF N Y K ++
Sbjct: 188 ANXFVGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 246
Query: 131 RVVFPESPRLSSSCKALISNIL 152
FPE + + L+ +L
Sbjct: 247 EYDFPE--KFFPKARDLVEKLL 266
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S++TV LA S++ AIKI+ K + ++ RE +V+ L HP ++ +
Sbjct: 40 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 99
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDE 290
++Y + YAKNG LL+ IRK DE
Sbjct: 100 DDEKLYFGLSYAKNGELLKYIRKIGSFDE 128
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 80/141 (56%), Gaps = 7/141 (4%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
R + +++ A++Y H K ++HRD+K EN+LL++ +I+++DFG A+ V + + KQ +
Sbjct: 140 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARA 196
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTN-YSELLKQVQKR 131
F G+ Y SPE+L + SD+W++G +++ +V G PF N Y K ++
Sbjct: 197 NXFVGTAQYVSPELLTEKSAC-KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 255
Query: 132 VVFPESPRLSSSCKALISNIL 152
FPE + + L+ +L
Sbjct: 256 YDFPE--KFFPKARDLVEKLL 274
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S++TV LA S++ AIKI+ K + ++ RE +V+ L HP ++ +
Sbjct: 48 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFCFQ 107
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDE 290
++Y + YAKNG LL+ IRK DE
Sbjct: 108 DDEKLYFGLSYAKNGELLKYIRKIGSFDE 136
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 10/122 (8%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
+AR + Q+ Y H+ V+HRD+K NL L++ +K+ DFG A K +Y
Sbjct: 116 EARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK-----VEYDGE 170
Query: 71 LSETFCGSYAYASPEIL--KGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+ CG+ Y +PE+L KG + + D+WS+G +++ ++ G+ PF+ + E ++
Sbjct: 171 RKKVLCGTPNYIAPEVLSKKGHSF---EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI 227
Query: 129 QK 130
+K
Sbjct: 228 KK 229
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 39/74 (52%)
Query: 220 AIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLL 279
A KI+ K + ++ + EI + + L H +++ F E V++++E + SLL
Sbjct: 44 AGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLL 103
Query: 280 EVIRKERYIDEDKA 293
E+ ++ + + E +A
Sbjct: 104 ELHKRRKALTEPEA 117
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 10/122 (8%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
+AR + Q+ Y H+ V+HRD+K NL L++ +K+ DFG A K +Y
Sbjct: 140 EARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK-----VEYDGE 194
Query: 71 LSETFCGSYAYASPEIL--KGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+ CG+ Y +PE+L KG + + D+WS+G +++ ++ G+ PF+ + E ++
Sbjct: 195 RKKVLCGTPNYIAPEVLSKKGHSF---EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI 251
Query: 129 QK 130
+K
Sbjct: 252 KK 253
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 39/74 (52%)
Query: 220 AIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLL 279
A KI+ K + ++ + EI + + L H +++ F E V++++E + SLL
Sbjct: 68 AGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLL 127
Query: 280 EVIRKERYIDEDKA 293
E+ ++ + + E +A
Sbjct: 128 ELHKRRKALTEPEA 141
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 10/122 (8%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
+AR + Q+ Y H+ V+HRD+K NL L++ +K+ DFG A K +Y
Sbjct: 142 EARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK-----VEYDGE 196
Query: 71 LSETFCGSYAYASPEIL--KGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+ CG+ Y +PE+L KG + + D+WS+G +++ ++ G+ PF+ + E ++
Sbjct: 197 RKKVLCGTPNYIAPEVLSKKGHSF---EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI 253
Query: 129 QK 130
+K
Sbjct: 254 KK 255
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 39/74 (52%)
Query: 220 AIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLL 279
A KI+ K + ++ + EI + + L H +++ F E V++++E + SLL
Sbjct: 70 AGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLL 129
Query: 280 EVIRKERYIDEDKA 293
E+ ++ + + E +A
Sbjct: 130 ELHKRRKALTEPEA 143
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 72/118 (61%), Gaps = 4/118 (3%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
R + +++ A++Y H K ++HRD+K EN+LL++ +I+++DFG A+ V + + KQ +
Sbjct: 138 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARA 194
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQK 130
F G+ Y SPE+L + SD+W++G +++ +V G PF N + +++ K
Sbjct: 195 NXFVGTAQYVSPELLTEKSAC-KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 251
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S++TV LA S++ AIKI+ K + ++ RE +V+ L HP ++ +
Sbjct: 46 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 105
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDE 290
++Y + YAKNG LL+ IRK DE
Sbjct: 106 DDEKLYFGLSYAKNGELLKYIRKIGSFDE 134
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 90/177 (50%), Gaps = 19/177 (10%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLL---DDKYNIKLSDFGFARKYSVN 63
Y A Q+ A+ Y H+ +VHRD+K ENLL ++ I ++DFG ++
Sbjct: 103 YTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK----- 157
Query: 64 NTDYKQN-LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS 122
+QN + T CG+ Y +PE+L PY+ + D WS+GV+ + ++ G PF + S
Sbjct: 158 ---MEQNGIMSTACGTPGYVAPEVLAQKPYS-KAVDCWSIGVITYILLCGYPPFYEETES 213
Query: 123 ELLKQVQKRVVFPESP---RLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKEDS 174
+L +++++ ESP +S S K I ++L P + R E PW+ ++
Sbjct: 214 KLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNE-RYTCEKALSHPWIDGNT 269
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+++ V L + A+K I K A + L EI V+K +KH N++ E
Sbjct: 20 GAFSEVFLVKQRLTGKLFALKCIKKSPA---FRDSSLENEIAVLKKIKHENIVTLEDIYE 76
Query: 262 TTHRVYIIMEYAKNGSLLE-VIRKERYIDEDKALL 295
+T Y++M+ G L + ++ + Y ++D +L+
Sbjct: 77 STTHYYLVMQLVSGGELFDRILERGVYTEKDASLV 111
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 84/147 (57%), Gaps = 9/147 (6%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTD 66
+ D A + ++++ A+ + H+K +++RD+K EN++L+ + ++KL+DFG ++ + T
Sbjct: 118 FMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT- 176
Query: 67 YKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLK 126
++ FCG+ Y +PEIL + + D WS+G +++ M+ G PF N + +
Sbjct: 177 ----VTHXFCGTIEYMAPEILMRSGHN-RAVDWWSLGALMYDMLTGAPPFTGENRKKTID 231
Query: 127 QVQK-RVVFPESPRLSSSCKALISNIL 152
++ K ++ P P L+ + L+ +L
Sbjct: 232 KILKCKLNLP--PYLTQEARDLLKKLL 256
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 207 VKLATSARHSQDVAIKIISK---VQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETT 263
V+ T A + A+K++ K V+ D R I ++ +KHP ++ + A +T
Sbjct: 36 VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNI--LEEVKHPFIVDLIYAFQTG 93
Query: 264 HRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVS 301
++Y+I+EY G L + +E ED A +E+S
Sbjct: 94 GKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEIS 131
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 28/200 (14%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVN 63
+N +A R +A A+D+ H K + HRD+K EN+L + +K+ DF +N
Sbjct: 108 FNEREASRVVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLN 167
Query: 64 NTDYKQNLSE--TFCGSYAYASPEILK----GVPYTPQQSDIWSMGVVLFAMVYGRLPF- 116
N+ E T CGS Y +PE+++ + ++ D+WS+GVVL+ M+ G PF
Sbjct: 168 NSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFV 227
Query: 117 ----DDTNY----------SELLKQVQK-RVVFPES--PRLSSSCKALISNIL-SPVKFR 158
D + ++L + +Q+ + FP+ +SS K LIS +L K R
Sbjct: 228 GHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQR 287
Query: 159 IQMEDIRQDPWLKEDSNPVG 178
+ + Q PW++ + G
Sbjct: 288 LSAAQVLQHPWVQGQAPEKG 307
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVV-KGLKHPNLIRFLQAI 260
+YA V+ A S ++ ++ A+KII K QA + F RE+E + + + N++ ++
Sbjct: 24 GAYAKVQGAVSLQNGKEYAVKIIEK-QAGHSRSRVF--REVETLYQCQGNKNILELIEFF 80
Query: 261 ETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
E R Y++ E + GS+L I+K+++ +E +A
Sbjct: 81 EDDTRFYLVFEKLQGGSILAHIQKQKHFNEREA 113
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQ 69
+ AR + +++ AID H+ VHRDIK +N+L+D +I+L+DFG K + T
Sbjct: 175 EMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ-- 232
Query: 70 NLSETFCGSYAYASPEILKGVP-----YTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSEL 124
S G+ Y SPEIL+ + Y P + D WS+GV ++ M+YG PF + E
Sbjct: 233 --SSVAVGTPDYISPEILQAMEGGKGRYGP-ECDWWSLGVCMYEMLYGETPFYAESLVET 289
Query: 125 LKQV---QKRVVFP-ESPRLSSSCKALISNILSPVKFRI---QMEDIRQDPWL 170
++ ++R FP + +S + K LI ++ + R+ +ED ++ P+
Sbjct: 290 YGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFF 342
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 82/193 (42%), Gaps = 35/193 (18%)
Query: 8 NTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDY 67
N + + QL + YCH++ V+HRD+K +NLL++++ +KL+DFG AR S+ Y
Sbjct: 98 NMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY 157
Query: 68 KQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLK- 126
+ + Y P+IL G Q D+W +G + + M GR F + E L
Sbjct: 158 DNEVVTLW-----YRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHF 212
Query: 127 ----------------------------QVQKRVVFPESPRLSSSCKALISNILS-PVKF 157
+ + + +PRL S L++ +L +
Sbjct: 213 IFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRN 272
Query: 158 RIQMEDIRQDPWL 170
RI ED + P+
Sbjct: 273 RISAEDAMKHPFF 285
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Query: 202 SSYATVKLATSARHSQDVAIKIIS---KVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQ 258
+YATV S VA+K I + AP + RE+ ++K LKH N++
Sbjct: 13 GTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAI-----REVSLLKDLKHANIVTLHD 67
Query: 259 AIETTHRVYIIMEY 272
I T + ++ EY
Sbjct: 68 IIHTEKSLTLVFEY 81
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 78/136 (57%), Gaps = 9/136 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+++A + + K +++RD+K +N++LD + +IK++DFG ++ + K FC
Sbjct: 128 AEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTK-----XFC 182
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV-QKRVVFP 135
G+ Y +PEI+ PY + D W+ GV+L+ M+ G+ PF+ + EL + + + V +P
Sbjct: 183 GTPDYIAPEIIAYQPYG-KSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP 241
Query: 136 E--SPRLSSSCKALIS 149
+ S + CK L++
Sbjct: 242 KSMSKEAVAICKGLMT 257
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 202 SSYATVKLATSARHSQDVAIKIISK--VQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQA 259
S+ V L+ + A+KI+ K V D + + + + G K P L +
Sbjct: 31 GSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG-KPPFLTQLHSC 89
Query: 260 IETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVS 301
+T R+Y +MEY G L+ I++ E A+ +E++
Sbjct: 90 FQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIA 131
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 95/195 (48%), Gaps = 27/195 (13%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVN 63
+ +A + +AI Y H ++ HRD+K ENLL K +KL+DFGFA++ + +
Sbjct: 112 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 171
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
N+ L+E C + Y +PE+L Y + D+WS+GV+++ ++ G PF +
Sbjct: 172 NS-----LTEP-CYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLA 224
Query: 124 LLKQVQKRVVF-------PESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDS 174
+ ++ R+ PE +S K LI N+L P + R+ + + PW+ +
Sbjct: 225 ISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQ-RMTITEFMNHPWIMQ-- 281
Query: 175 NPVGKSKSAPEVGIH 189
S P+ +H
Sbjct: 282 -----STKVPQTPLH 291
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 27/195 (13%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVN 63
+ +A + +AI Y H ++ HRD+K ENLL K +KL+DFGFA++ + +
Sbjct: 119 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 178
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
N+ T C + Y +PE+L Y + D+WS+GV+++ ++ G PF +
Sbjct: 179 NS------LTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLA 231
Query: 124 LLKQVQKRVVF-------PESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDS 174
+ ++ R+ PE +S K LI N+L P + R+ + + PW+ +
Sbjct: 232 ISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQ-RMTITEFMNHPWIMQ-- 288
Query: 175 NPVGKSKSAPEVGIH 189
S P+ +H
Sbjct: 289 -----STKVPQTPLH 298
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 27/195 (13%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVN 63
+ +A + +AI Y H ++ HRD+K ENLL K +KL+DFGFA++ + +
Sbjct: 118 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 177
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
N+ T C + Y +PE+L Y + D+WS+GV+++ ++ G PF +
Sbjct: 178 NS------LTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLA 230
Query: 124 LLKQVQKRVVF-------PESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDS 174
+ ++ R+ PE +S K LI N+L P + R+ + + PW+ +
Sbjct: 231 ISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQ-RMTITEFMNHPWIMQ-- 287
Query: 175 NPVGKSKSAPEVGIH 189
S P+ +H
Sbjct: 288 -----STKVPQTPLH 297
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 78/136 (57%), Gaps = 9/136 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+++A + + K +++RD+K +N++LD + +IK++DFG ++ + K FC
Sbjct: 449 AEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTK-----XFC 503
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV-QKRVVFP 135
G+ Y +PEI+ PY + D W+ GV+L+ M+ G+ PF+ + EL + + + V +P
Sbjct: 504 GTPDYIAPEIIAYQPYG-KSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP 562
Query: 136 E--SPRLSSSCKALIS 149
+ S + CK L++
Sbjct: 563 KSMSKEAVAICKGLMT 578
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 202 SSYATVKLATSARHSQDVAIKIISK--VQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQA 259
S+ V L+ + A+KI+ K V D + + + + G K P L +
Sbjct: 352 GSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG-KPPFLTQLHSC 410
Query: 260 IETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVS 301
+T R+Y +MEY G L+ I++ E A+ +E++
Sbjct: 411 FQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIA 452
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 89/175 (50%), Gaps = 18/175 (10%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVN 63
Y+ A + Q+ +A+ YCH +++HRD+K +LL K N +KL FG A + +
Sbjct: 129 YSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES 188
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++ G+ + +PE++K PY + D+W GV+LF ++ G LPF T E
Sbjct: 189 GL-----VAGGRVGTPHFMAPEVVKREPYG-KPVDVWGCGVILFILLSGCLPFYGTK--E 240
Query: 124 LLKQVQKRVVFPESPR----LSSSCKALISN--ILSPVKFRIQMEDIRQDPWLKE 172
L + + + +PR +S S K L+ +L P + RI + + PWLKE
Sbjct: 241 RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAE-RITVYEALNHPWLKE 294
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/86 (20%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 202 SSYATVKLATSARHSQDVAIKII--SKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQA 259
++ V+ + Q A+KI+ +K + + L RE + LKHP+++ L+
Sbjct: 37 GPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLET 96
Query: 260 IETTHRVYIIMEYAKNGSL-LEVIRK 284
+ +Y++ E+ L E++++
Sbjct: 97 YSSDGMLYMVFEFMDGADLCFEIVKR 122
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 27/195 (13%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVN 63
+ +A + +AI Y H ++ HRD+K ENLL K +KL+DFGFA++ + +
Sbjct: 114 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 173
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
N+ T C + Y +PE+L Y + D+WS+GV+++ ++ G PF +
Sbjct: 174 NS------LTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLA 226
Query: 124 LLKQVQKRVVF-------PESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDS 174
+ ++ R+ PE +S K LI N+L P + R+ + + PW+ +
Sbjct: 227 ISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQ-RMTITEFMNHPWIMQ-- 283
Query: 175 NPVGKSKSAPEVGIH 189
S P+ +H
Sbjct: 284 -----STKVPQTPLH 293
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 89/175 (50%), Gaps = 18/175 (10%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVN 63
Y+ A + Q+ +A+ YCH +++HRD+K +LL K N +KL FG A + +
Sbjct: 127 YSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES 186
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++ G+ + +PE++K PY + D+W GV+LF ++ G LPF T E
Sbjct: 187 GL-----VAGGRVGTPHFMAPEVVKREPYG-KPVDVWGCGVILFILLSGCLPFYGTK--E 238
Query: 124 LLKQVQKRVVFPESPR----LSSSCKALISN--ILSPVKFRIQMEDIRQDPWLKE 172
L + + + +PR +S S K L+ +L P + RI + + PWLKE
Sbjct: 239 RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAE-RITVYEALNHPWLKE 292
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/86 (20%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 202 SSYATVKLATSARHSQDVAIKII--SKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQA 259
++ V+ + Q A+KI+ +K + + L RE + LKHP+++ L+
Sbjct: 35 GPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLET 94
Query: 260 IETTHRVYIIMEYAKNGSL-LEVIRK 284
+ +Y++ E+ L E++++
Sbjct: 95 YSSDGMLYMVFEFMDGADLCFEIVKR 120
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 27/195 (13%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVN 63
+ +A + +AI Y H ++ HRD+K ENLL K +KL+DFGFA++ + +
Sbjct: 114 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 173
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
N+ T C + Y +PE+L Y + D+WS+GV+++ ++ G PF +
Sbjct: 174 NS------LTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLA 226
Query: 124 LLKQVQKRVVF-------PESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDS 174
+ ++ R+ PE +S K LI N+L P + R+ + + PW+ +
Sbjct: 227 ISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQ-RMTITEFMNHPWIMQ-- 283
Query: 175 NPVGKSKSAPEVGIH 189
S P+ +H
Sbjct: 284 -----STKVPQTPLH 293
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 27/195 (13%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVN 63
+ +A + +AI Y H ++ HRD+K ENLL K +KL+DFGFA++ + +
Sbjct: 120 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 179
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
N+ T C + Y +PE+L Y + D+WS+GV+++ ++ G PF +
Sbjct: 180 NS------LTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLA 232
Query: 124 LLKQVQKRVVF-------PESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDS 174
+ ++ R+ PE +S K LI N+L P + R+ + + PW+ +
Sbjct: 233 ISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQ-RMTITEFMNHPWIMQ-- 289
Query: 175 NPVGKSKSAPEVGIH 189
S P+ +H
Sbjct: 290 -----STKVPQTPLH 299
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 27/195 (13%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVN 63
+ +A + +AI Y H ++ HRD+K ENLL K +KL+DFGFA++ + +
Sbjct: 113 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 172
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
N+ T C + Y +PE+L Y + D+WS+GV+++ ++ G PF +
Sbjct: 173 NS------LTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLA 225
Query: 124 LLKQVQKRVVF-------PESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDS 174
+ ++ R+ PE +S K LI N+L P + R+ + + PW+ +
Sbjct: 226 ISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQ-RMTITEFMNHPWIMQ-- 282
Query: 175 NPVGKSKSAPEVGIH 189
S P+ +H
Sbjct: 283 -----STKVPQTPLH 292
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 27/195 (13%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVN 63
+ +A + +AI Y H ++ HRD+K ENLL K +KL+DFGFA++ + +
Sbjct: 112 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 171
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
N+ T C + Y +PE+L Y + D+WS+GV+++ ++ G PF +
Sbjct: 172 NS------LTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLA 224
Query: 124 LLKQVQKRVVF-------PESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDS 174
+ ++ R+ PE +S K LI N+L P + R+ + + PW+ +
Sbjct: 225 ISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQ-RMTITEFMNHPWIMQ-- 281
Query: 175 NPVGKSKSAPEVGIH 189
S P+ +H
Sbjct: 282 -----STKVPQTPLH 291
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 27/195 (13%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVN 63
+ +A + +AI Y H ++ HRD+K ENLL K +KL+DFGFA++ + +
Sbjct: 164 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 223
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
N+ T C + Y +PE+L Y + D+WS+GV+++ ++ G PF +
Sbjct: 224 NS------LTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLA 276
Query: 124 LLKQVQKRVVF-------PESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDS 174
+ ++ R+ PE +S K LI N+L P + R+ + + PW+ +
Sbjct: 277 ISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQ-RMTITEFMNHPWIMQ-- 333
Query: 175 NPVGKSKSAPEVGIH 189
S P+ +H
Sbjct: 334 -----STKVPQTPLH 343
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ + QL + +CH V+HRD+K ENLL++ + IKL+DFG AR + V Y +
Sbjct: 107 KSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDTNYSELLK 126
+ Y +PEIL G Y DIWS+G + MV R F D+ +L +
Sbjct: 167 TLW-----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 216
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V A + + VA+K I ++ + + REI ++K L HPN+++ L I
Sbjct: 15 GTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 73
Query: 262 TTHRVYIIMEY 272
T +++Y++ E+
Sbjct: 74 TENKLYLVFEF 84
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ + QL + +CH V+HRD+K ENLL++ + IKL+DFG AR + V Y +
Sbjct: 106 KSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDTNYSELLK 126
+ Y +PEIL G Y DIWS+G + MV R F D+ +L +
Sbjct: 166 TLW-----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 215
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V A + + VA+K I ++ + + REI ++K L HPN+++ L I
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72
Query: 262 TTHRVYIIMEY 272
T +++Y++ E+
Sbjct: 73 TENKLYLVFEF 83
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ + QL + +CH V+HRD+K ENLL++ + IKL+DFG AR + V Y +
Sbjct: 107 KSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDTNYSELLK 126
+ Y +PEIL G Y DIWS+G + MV R F D+ +L +
Sbjct: 167 TLW-----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 216
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V A + + VA+K I ++ + + REI ++K L HPN+++ L I
Sbjct: 15 GTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 73
Query: 262 TTHRVYIIMEY 272
T +++Y++ E+
Sbjct: 74 TENKLYLVFEF 84
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 27/195 (13%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVN 63
+ +A + +AI Y H ++ HRD+K ENLL K +KL+DFGFA++ + +
Sbjct: 158 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 217
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
N+ T C + Y +PE+L Y + D+WS+GV+++ ++ G PF +
Sbjct: 218 NS------LTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLA 270
Query: 124 LLKQVQKRVVF-------PESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDS 174
+ ++ R+ PE +S K LI N+L P + R+ + + PW+ +
Sbjct: 271 ISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQ-RMTITEFMNHPWIMQ-- 327
Query: 175 NPVGKSKSAPEVGIH 189
S P+ +H
Sbjct: 328 -----STKVPQTPLH 337
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 27/195 (13%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVN 63
+ +A + +AI Y H ++ HRD+K ENLL K +KL+DFGFA++ + +
Sbjct: 128 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 187
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
N+ T C + Y +PE+L Y + D+WS+GV+++ ++ G PF +
Sbjct: 188 NS------LTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLA 240
Query: 124 LLKQVQKRVVF-------PESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDS 174
+ ++ R+ PE +S K LI N+L P + R+ + + PW+ +
Sbjct: 241 ISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQ-RMTITEFMNHPWIMQ-- 297
Query: 175 NPVGKSKSAPEVGIH 189
S P+ +H
Sbjct: 298 -----STKVPQTPLH 307
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ + QL + +CH V+HRD+K ENLL++ + IKL+DFG AR + V Y +
Sbjct: 109 KSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDTNYSELLK 126
+ Y +PEIL G Y DIWS+G + MV R F D+ +L +
Sbjct: 169 TLW-----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 218
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V A + + VA+K I ++ + + REI ++K L HPN+++ L I
Sbjct: 17 GTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 75
Query: 262 TTHRVYIIMEY 272
T +++Y++ E+
Sbjct: 76 TENKLYLVFEF 86
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 83/164 (50%), Gaps = 14/164 (8%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQ 69
D AR + ++ AID H+ VHRDIK +N+LLD +I+L+DFG K + + T
Sbjct: 175 DMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGT---- 230
Query: 70 NLSETFCGSYAYASPEILKGVP-----YTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSEL 124
S G+ Y SPEIL+ + Y P + D WS+GV ++ M+YG PF + E
Sbjct: 231 VQSSVAVGTPDYISPEILQAMEDGMGKYGP-ECDWWSLGVCMYEMLYGETPFYAESLVET 289
Query: 125 LKQV---QKRVVFPES-PRLSSSCKALISNILSPVKFRIQMEDI 164
++ ++R FP +S K LI ++ + R+ I
Sbjct: 290 YGKIMNHEERFQFPSHVTDVSEEAKDLIQRLICSRERRLGQNGI 333
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 83/164 (50%), Gaps = 14/164 (8%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQ 69
D AR + ++ AID H+ VHRDIK +N+LLD +I+L+DFG K + + T
Sbjct: 191 DMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGT---- 246
Query: 70 NLSETFCGSYAYASPEILKGVP-----YTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSEL 124
S G+ Y SPEIL+ + Y P + D WS+GV ++ M+YG PF + E
Sbjct: 247 VQSSVAVGTPDYISPEILQAMEDGMGKYGP-ECDWWSLGVCMYEMLYGETPFYAESLVET 305
Query: 125 LKQV---QKRVVFPES-PRLSSSCKALISNILSPVKFRIQMEDI 164
++ ++R FP +S K LI ++ + R+ I
Sbjct: 306 YGKIMNHEERFQFPSHVTDVSEEAKDLIQRLICSRERRLGQNGI 349
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ + QL + +CH V+HRD+K ENLL++ + IKL+DFG AR + V Y +
Sbjct: 108 KSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDTNYSELLK 126
+ Y +PEIL G Y DIWS+G + MV R F D+ +L +
Sbjct: 168 TLW-----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 217
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V A + + VA+K I ++ + + REI ++K L HPN+++ L I
Sbjct: 16 GTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 74
Query: 262 TTHRVYIIMEY 272
T +++Y++ E+
Sbjct: 75 TENKLYLVFEF 85
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 17/173 (9%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDK---YNIKLSDFGFARKYSVN 63
Y+ A Q+ +A+ Y H+ +VHRD+K ENLL +K++DFG ++
Sbjct: 145 YSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE-- 202
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
Q L +T CG+ Y +PEIL+G Y P + D+WS+G++ + ++ G PF D +
Sbjct: 203 ----HQVLMKTVCGTPGYCAPEILRGCAYGP-EVDMWSVGIITYILLCGFEPFYDERGDQ 257
Query: 124 LLKQ----VQKRVVFPESPRLSSSCKALISN--ILSPVKFRIQMEDIRQDPWL 170
+ + + + P +S + K L+ +L P K R+ Q PW+
Sbjct: 258 FMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKK-RLTTFQALQHPWV 309
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 220 AIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLL 279
A+K++ K +D KK + EI V+ L HPN+I+ + ET + +++E G L
Sbjct: 82 ALKVLKKT---VD--KKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELF 136
Query: 280 EVIRKERYIDEDKA 293
+ I ++ Y E A
Sbjct: 137 DRIVEKGYYSERDA 150
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNI-KLSDFGFARKYSVNNTDYKQNLSE 73
+ Q+ + + Y H +VHRDIK +N+L++ + K+SDFG +++ + N +E
Sbjct: 127 YTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP-----CTE 181
Query: 74 TFCGSYAYASPEIL-KGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE-LLKQVQKR 131
TF G+ Y +PEI+ KG + +DIWS+G + M G+ PF + + + +V
Sbjct: 182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMF 241
Query: 132 VVFPESPR-LSSSCKALISNILSP-VKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
V PE P +S+ KA I P R D+ D +LK S K K+ P++
Sbjct: 242 KVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSSK---KKKTQPKL 295
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 238 LPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIR 283
L EI + K LKH N++++L + + I ME GSL ++R
Sbjct: 66 LHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLR 111
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 65/124 (52%), Gaps = 7/124 (5%)
Query: 5 LDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNN 64
L+ N K +W QL + +CH+ ++HRD+K +NLL++ + +KL DFG AR + +
Sbjct: 105 LELNLVKYFQW--QLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV 162
Query: 65 TDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSEL 124
+ + + Y +P++L G DIWS G +L M+ G+ F TN E
Sbjct: 163 NTFSSEVVTLW-----YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQ 217
Query: 125 LKQV 128
LK +
Sbjct: 218 LKLI 221
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 240 REIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKN 275
REI ++K LKH N++R I T +++ ++ E+ N
Sbjct: 52 REISLMKELKHENIVRLYDVIHTENKLTLVFEFMDN 87
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 76/146 (52%), Gaps = 6/146 (4%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTD 66
+ D+ WF Q+ A+ + H + ++HRDIK +N+ L ++L DFG AR +N+T
Sbjct: 122 FQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIAR--VLNST- 178
Query: 67 YKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLK 126
L+ G+ Y SPEI + PY +SDIW++G VL+ + + F+ + L+
Sbjct: 179 --VELARACIGTPYYLSPEICENKPYN-NKSDIWALGCVLYELCTLKHAFEAGSMKNLVL 235
Query: 127 QVQKRVVFPESPRLSSSCKALISNIL 152
++ P S S ++L+S +
Sbjct: 236 KIISGSFPPVSLHYSYDLRSLVSQLF 261
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 43/81 (53%), Gaps = 11/81 (13%)
Query: 240 REIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYI--DEDKALLCY 297
RE+ V+ +KHPN++++ ++ E +YI+M+Y + G L + I ++ + ED+ L +
Sbjct: 72 REVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWF 131
Query: 298 SEVSNLSQTFSRCCYQDHIQD 318
++ C H+ D
Sbjct: 132 VQI---------CLALKHVHD 143
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 76/142 (53%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + I+++DFGFA++ +
Sbjct: 164 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--------KGA 215
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ T CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 216 TWTLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 274
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 275 KVRFPS--HFSSDLKDLLRNLL 294
Score = 28.1 bits (61), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 73 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 132
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 133 DNSNLYMVMEYVAGGEMFSHLRR 155
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 76/142 (53%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + I+++DFGFA++ +
Sbjct: 129 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--------KGR 180
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ T CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 181 TWTLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 239
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 240 KVRFPS--HFSSDLKDLLRNLL 259
Score = 28.1 bits (61), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 38 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 97
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 98 DNSNLYMVMEYVPGGEMFSHLRR 120
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 76/142 (53%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + I+++DFGFA++ +
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--------KGR 195
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ T CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 196 TWTLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 254
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 255 KVRFPS--HFSSDLKDLLRNLL 274
Score = 27.7 bits (60), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRR 135
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ + QL + +CH V+HRD+K +NLL++ + IKL+DFG AR + V Y +
Sbjct: 106 KSYLFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDTNYSELLK 126
+ Y +PEIL G Y DIWS+G + MV R F D+ +L +
Sbjct: 166 TLW-----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 215
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V A + + VA+K I ++ + + REI ++K L HPN+++ L I
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72
Query: 262 TTHRVYIIMEY 272
T +++Y++ E+
Sbjct: 73 TENKLYLVFEF 83
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ + QL + +CH V+HRD+K +NLL++ + IKL+DFG AR + V Y +
Sbjct: 106 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDTNYSELLK 126
+ Y +PEIL G Y DIWS+G + MV R F D+ +L +
Sbjct: 166 TLW-----YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 215
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V A + + VA+K I ++ + + REI ++K L HPN+++ L I
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72
Query: 262 TTHRVYIIMEY 272
T +++Y++ E+
Sbjct: 73 TENKLYLVFEF 83
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ + QL + +CH V+HRD+K +NLL++ + IKL+DFG AR + V Y +
Sbjct: 105 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 164
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDTNYSELLK 126
+ Y +PEIL G Y DIWS+G + MV R F D+ +L +
Sbjct: 165 TLW-----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 214
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V A + + VA+K I ++ + + REI ++K L HPN+++ L I
Sbjct: 13 GTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 71
Query: 262 TTHRVYIIMEY 272
T +++Y++ E+
Sbjct: 72 TENKLYLVFEH 82
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 75/141 (53%), Gaps = 9/141 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNI-KLSDFGFARKYSVNNTDYKQNLSETFC 76
Q+ + + Y H +VHRDIK +N+L++ + K+SDFG +++ + N +ETF
Sbjct: 116 QILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP-----CTETFT 170
Query: 77 GSYAYASPEIL-KGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE-LLKQVQKRVVF 134
G+ Y +PEI+ KG + +DIWS+G + M G+ PF + + + +V V
Sbjct: 171 GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVH 230
Query: 135 PESPR-LSSSCKALISNILSP 154
PE P +S+ KA I P
Sbjct: 231 PEIPESMSAEAKAFILKCFEP 251
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 238 LPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIR 283
L EI + K LKH N++++L + + I ME GSL ++R
Sbjct: 52 LHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLR 97
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ + QL + +CH V+HRD+K +NLL++ + IKL+DFG AR + V Y +
Sbjct: 106 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDTNYSELLK 126
+ Y +PEIL G Y DIWS+G + MV R F D+ +L +
Sbjct: 166 TLW-----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 215
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V A + + VA+K I ++ + + REI ++K L HPN+++ L I
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72
Query: 262 TTHRVYIIMEY 272
T +++Y++ E+
Sbjct: 73 TENKLYLVFEF 83
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ + QL + +CH V+HRD+K +NLL++ + IKL+DFG AR + V Y +
Sbjct: 105 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 164
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDTNYSELLK 126
+ Y +PEIL G Y DIWS+G + MV R F D+ +L +
Sbjct: 165 TLW-----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 214
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V A + + VA+K I ++ + + REI ++K L HPN+++ L I
Sbjct: 13 GTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 71
Query: 262 TTHRVYIIMEY 272
T +++Y++ E+
Sbjct: 72 TENKLYLVFEF 82
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ + QL + +CH V+HRD+K +NLL++ + IKL+DFG AR + V Y +
Sbjct: 106 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDTNYSELLK 126
+ Y +PEIL G Y DIWS+G + MV R F D+ +L +
Sbjct: 166 TLW-----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 215
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 240 REIEVVKGLKHPNLIRFLQAIETTHRVYIIMEY 272
REI ++K L HPN+++ L I T +++Y++ E+
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEF 83
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ + QL + +CH V+HRD+K +NLL++ + IKL+DFG AR + V Y +
Sbjct: 105 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 164
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDTNYSELLK 126
+ Y +PEIL G Y DIWS+G + MV R F D+ +L +
Sbjct: 165 TLW-----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 214
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 240 REIEVVKGLKHPNLIRFLQAIETTHRVYIIMEY 272
REI ++K L HPN+++ L I T +++Y++ E+
Sbjct: 50 REISLLKELNHPNIVKLLDVIHTENKLYLVFEF 82
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ + QL + +CH V+HRD+K +NLL++ + IKL+DFG AR + V Y +
Sbjct: 105 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 164
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDTNYSELLK 126
+ Y +PEIL G Y DIWS+G + MV R F D+ +L +
Sbjct: 165 TLW-----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 214
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V A + + VA+K I ++ + + REI ++K L HPN+++ L I
Sbjct: 13 GTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 71
Query: 262 TTHRVYIIMEY 272
T +++Y++ E+
Sbjct: 72 TENKLYLVFEF 82
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ + QL + +CH V+HRD+K +NLL++ + IKL+DFG AR + V Y +
Sbjct: 107 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDTNYSELLK 126
+ Y +PEIL G Y DIWS+G + MV R F D+ +L +
Sbjct: 167 TLW-----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 216
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V A + + VA+K I ++ + + REI ++K L HPN+++ L I
Sbjct: 15 GTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 73
Query: 262 TTHRVYIIMEY 272
T +++Y++ E+
Sbjct: 74 TENKLYLVFEF 84
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ + QL + +CH V+HRD+K +NLL++ + IKL+DFG AR + V Y +
Sbjct: 106 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDTNYSELLK 126
+ Y +PEIL G Y DIWS+G + MV R F D+ +L +
Sbjct: 166 TLW-----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 215
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V A + + VA+K I ++ + + REI ++K L HPN+++ L I
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72
Query: 262 TTHRVYIIMEY 272
T +++Y++ E+
Sbjct: 73 TENKLYLVFEF 83
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ + QL + +CH V+HRD+K +NLL++ + IKL+DFG AR + V Y +
Sbjct: 106 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDTNYSELLK 126
+ Y +PEIL G Y DIWS+G + MV R F D+ +L +
Sbjct: 166 TLW-----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 215
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V A + + VA+K I ++ + + REI ++K L HPN+++ L I
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72
Query: 262 TTHRVYIIMEY 272
T +++Y++ E+
Sbjct: 73 TENKLYLVFEF 83
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ + QL + +CH V+HRD+K +NLL++ + IKL+DFG AR + V Y +
Sbjct: 106 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDTNYSELLK 126
+ Y +PEIL G Y DIWS+G + MV R F D+ +L +
Sbjct: 166 TLW-----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 215
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V A + + VA+K I ++ + + REI ++K L HPN+++ L I
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72
Query: 262 TTHRVYIIMEY 272
T +++Y++ E+
Sbjct: 73 TENKLYLVFEF 83
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ + QL + +CH V+HRD+K +NLL++ + IKL+DFG AR + V Y +
Sbjct: 106 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDTNYSELLK 126
+ Y +PEIL G Y DIWS+G + MV R F D+ +L +
Sbjct: 166 TLW-----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 215
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V A + + VA+K I ++ + + REI ++K L HPN+++ L I
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72
Query: 262 TTHRVYIIMEY 272
T +++Y++ E+
Sbjct: 73 TENKLYLVFEF 83
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ + QL + +CH V+HRD+K +NLL++ + IKL+DFG AR + V Y +
Sbjct: 105 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 164
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDTNYSELLK 126
+ Y +PEIL G Y DIWS+G + MV R F D+ +L +
Sbjct: 165 TLW-----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 214
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V A + + VA+K I ++ + + REI ++K L HPN+++ L I
Sbjct: 13 GTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 71
Query: 262 TTHRVYIIMEY 272
T +++Y++ E+
Sbjct: 72 TENKLYLVFEF 82
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ + QL + +CH V+HRD+K +NLL++ + IKL+DFG AR + V Y +
Sbjct: 105 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 164
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDTNYSELLK 126
+ Y +PEIL G Y DIWS+G + MV R F D+ +L +
Sbjct: 165 TLW-----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 214
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V A + + VA+K I ++ + + REI ++K L HPN+++ L I
Sbjct: 13 GTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 71
Query: 262 TTHRVYIIMEY 272
T +++Y++ E+
Sbjct: 72 TENKLYLVFEF 82
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ + QL + +CH V+HRD+K +NLL++ + IKL+DFG AR + V Y +
Sbjct: 107 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDTNYSELLK 126
+ Y +PEIL G Y DIWS+G + MV R F D+ +L +
Sbjct: 167 TLW-----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 216
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V A + + VA+K I ++ + + REI ++K L HPN+++ L I
Sbjct: 15 GTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 73
Query: 262 TTHRVYIIMEY 272
T +++Y++ E+
Sbjct: 74 TENKLYLVFEF 84
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ + QL + +CH V+HRD+K +NLL++ + IKL+DFG AR + V Y +
Sbjct: 107 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 166
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDTNYSELLK 126
+ Y +PEIL G Y DIWS+G + MV R F D+ +L +
Sbjct: 167 TLW-----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 216
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V A + + VA+K I ++ + + REI ++K L HPN+++ L I
Sbjct: 15 GTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 73
Query: 262 TTHRVYIIMEY 272
T +++Y++ E+
Sbjct: 74 TENKLYLVFEF 84
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ + QL + +CH V+HRD+K +NLL++ + IKL+DFG AR + V Y +
Sbjct: 110 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 169
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDTNYSELLK 126
+ Y +PEIL G Y DIWS+G + MV R F D+ +L +
Sbjct: 170 TLW-----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 219
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V A + + VA+K I ++ + + REI ++K L HPN+++ L I
Sbjct: 18 GTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 76
Query: 262 TTHRVYIIMEY 272
T +++Y++ E+
Sbjct: 77 TENKLYLVFEF 87
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ + QL + +CH V+HRD+K +NLL++ + IKL+DFG AR + V Y +
Sbjct: 113 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 172
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDTNYSELLK 126
+ Y +PEIL G Y DIWS+G + MV R F D+ +L +
Sbjct: 173 TLW-----YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 222
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V A + + VA+K I ++ + + REI ++K L HPN+++ L I
Sbjct: 21 GTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 79
Query: 262 TTHRVYIIMEY 272
T +++Y++ E+
Sbjct: 80 TENKLYLVFEF 90
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ + QL + +CH V+HRD+K +NLL++ + IKL+DFG AR + V Y +
Sbjct: 108 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDTNYSELLK 126
+ Y +PEIL G Y DIWS+G + MV R F D+ +L +
Sbjct: 168 TLW-----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 217
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V A + + VA+K I ++ + + REI ++K L HPN+++ L I
Sbjct: 16 GTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 74
Query: 262 TTHRVYIIMEY 272
T +++Y++ E+
Sbjct: 75 TENKLYLVFEF 85
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ + QL + +CH V+HRD+K +NLL++ + IKL+DFG AR + V Y +
Sbjct: 106 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDTNYSELLK 126
+ Y +PEIL G Y DIWS+G + MV R F D+ +L +
Sbjct: 166 TLW-----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 215
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V A + + VA+K I ++ + + REI ++K L HPN+++ L I
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72
Query: 262 TTHRVYIIMEY 272
T +++Y++ E+
Sbjct: 73 TENKLYLVFEF 83
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ + QL + +CH V+HRD+K +NLL++ + IKL+DFG AR + V Y +
Sbjct: 109 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDTNYSELLK 126
+ Y +PEIL G Y DIWS+G + MV R F D+ +L +
Sbjct: 169 TLW-----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 218
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V A + + VA+K I ++ + + REI ++K L HPN+++ L I
Sbjct: 17 GTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 75
Query: 262 TTHRVYIIMEY 272
T +++Y++ E+
Sbjct: 76 TENKLYLVFEH 86
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ + QL + +CH V+HRD+K +NLL++ + IKL+DFG AR + V Y +
Sbjct: 113 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 172
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDTNYSELLK 126
+ Y +PEIL G Y DIWS+G + MV R F D+ +L +
Sbjct: 173 TLW-----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 222
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V A + + VA+K I ++ + + REI ++K L HPN+++ L I
Sbjct: 21 GTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 79
Query: 262 TTHRVYIIMEY 272
T +++Y++ E+
Sbjct: 80 TENKLYLVFEF 90
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ + QL + +CH V+HRD+K +NLL++ + IKL+DFG AR + V Y +
Sbjct: 109 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDTNYSELLK 126
+ Y +PEIL G Y DIWS+G + MV R F D+ +L +
Sbjct: 169 TLW-----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 218
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V A + + VA+K I ++ + + REI ++K L HPN+++ L I
Sbjct: 17 GTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 75
Query: 262 TTHRVYIIMEY 272
T +++Y++ E+
Sbjct: 76 TENKLYLVFEF 86
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ + QL + +CH V+HRD+K +NLL++ + IKL+DFG AR + V Y +
Sbjct: 109 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDTNYSELLK 126
+ Y +PEIL G Y DIWS+G + MV R F D+ +L +
Sbjct: 169 TLW-----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 218
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V A + + VA+K I ++ + + REI ++K L HPN+++ L I
Sbjct: 17 GTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 75
Query: 262 TTHRVYIIMEY 272
T +++Y++ E+
Sbjct: 76 TENKLYLVFEF 86
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ + QL + +CH V+HRD+K +NLL++ + IKL+DFG AR + V Y +
Sbjct: 108 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDTNYSELLK 126
+ Y +PEIL G Y DIWS+G + MV R F D+ +L +
Sbjct: 168 TLW-----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 217
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V A + + VA+K I ++ + + REI ++K L HPN+++ L I
Sbjct: 16 GTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 74
Query: 262 TTHRVYIIMEY 272
T +++Y++ E+
Sbjct: 75 TENKLYLVFEF 85
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ + QL + +CH V+HRD+K +NLL++ + IKL+DFG AR + V Y +
Sbjct: 109 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDTNYSELLK 126
+ Y +PEIL G Y DIWS+G + MV R F D+ +L +
Sbjct: 169 TLW-----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 218
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V A + + VA+K I ++ + + REI ++K L HPN+++ L I
Sbjct: 17 GTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 75
Query: 262 TTHRVYIIMEY 272
T +++Y++ E+
Sbjct: 76 TENKLYLVFEF 86
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ + QL + +CH V+HRD+K +NLL++ + IKL+DFG AR + V Y +
Sbjct: 108 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDTNYSELLK 126
+ Y +PEIL G Y DIWS+G + MV R F D+ +L +
Sbjct: 168 TLW-----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 217
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V A + + VA+K I ++ + + REI ++K L HPN+++ L I
Sbjct: 16 GTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 74
Query: 262 TTHRVYIIMEY 272
T +++Y++ E+
Sbjct: 75 TENKLYLVFEF 85
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ + QL + +CH V+HRD+K +NLL++ + IKL+DFG AR + V Y +
Sbjct: 110 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 169
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDTNYSELLK 126
+ Y +PEIL G Y DIWS+G + MV R F D+ +L +
Sbjct: 170 TLW-----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 219
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V A + + VA+K I ++ + + REI ++K L HPN+++ L I
Sbjct: 18 GTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 76
Query: 262 TTHRVYIIMEY 272
T +++Y++ E+
Sbjct: 77 TENKLYLVFEF 87
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ + QL + +CH V+HRD+K +NLL++ + IKL+DFG AR + V Y +
Sbjct: 109 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDTNYSELLK 126
+ Y +PEIL G Y DIWS+G + MV R F D+ +L +
Sbjct: 169 TLW-----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 218
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+Y V A + + VA+K I ++ + + REI ++K L HPN+++ L I
Sbjct: 17 GTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 75
Query: 262 TTHRVYIIMEY 272
T +++Y++ E+
Sbjct: 76 TENKLYLVFEF 86
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + IK++DFGFA++ +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV--------KGR 194
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 254 KVRFPS--HFSSDLKDLLRNLL 273
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + IK++DFGFA++ +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV--------KGR 194
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 254 KVRFPS--HFSSDLKDLLRNLL 273
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + IK++DFGFA++ +
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV--------KGR 195
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 196 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 254
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 255 KVRFPS--HFSSDLKDLLRNLL 274
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + IK++DFGFA++ +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV--------KGR 194
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 254 KVRFPS--HFSSDLKDLLRNLL 273
Score = 27.7 bits (60), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRR 134
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 77/146 (52%), Gaps = 10/146 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q A +DY H K+++HRD+K N+ L + +K+ DFG A +V + E G
Sbjct: 140 QTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLA---TVKSRWSGSQQVEQPTG 196
Query: 78 SYAYASPEILKGVPYTP--QQSDIWSMGVVLFAMVYGRLPFDD-TNYSELLKQVQKRVVF 134
S + +PE+++ P QSD++S G+VL+ ++ G LP+ N +++ V +
Sbjct: 197 SVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYAS 256
Query: 135 PESPRLSSSC----KALISNILSPVK 156
P+ +L +C K L+++ + VK
Sbjct: 257 PDLSKLYKNCPKAMKRLVADCVKKVK 282
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 76/142 (53%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D++ I+++DFGFA++ +
Sbjct: 130 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRV--------KGR 181
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 182 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 240
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 241 KVRFPS--HFSSDLKDLLRNLL 260
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 39 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 98
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 99 DNSNLYMVMEYVAGGEMFSHLRR 121
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 5/126 (3%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
A+ + QL + I YCH + V+HRD+K +NLL++ + +K++DFG AR + + Y +
Sbjct: 102 AKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEI 161
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKR 131
+ Y +P++L G DIWS+G + MV G F + ++ L ++ +
Sbjct: 162 VTLW-----YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRI 216
Query: 132 VVFPES 137
+ P S
Sbjct: 217 LGTPNS 222
Score = 31.2 bits (69), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 240 REIEVVKGLKHPNLIRFLQAIETTHRVYIIMEY 272
REI ++K LKH N+++ I T R+ ++ E+
Sbjct: 49 REISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 14/122 (11%)
Query: 5 LDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKY---- 60
L+ D+ R F Q+ +A+ Y H + ++HRD+K N+ +D+ N+K+ DFG A+
Sbjct: 111 LNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 61 ------SVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRL 114
S N NL+ G+ Y + E+L G + ++ D++S+G++ F M+Y
Sbjct: 171 DILKLDSQNLPGSSDNLTSA-IGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY--- 226
Query: 115 PF 116
PF
Sbjct: 227 PF 228
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENL++D + IK++DFGFA++ +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV--------KGR 194
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 254 KVRFPS--HFSSDLKDLLRNLL 273
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/83 (20%), Positives = 36/83 (43%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEYA G + +R+
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRR 134
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENL++D + IK++DFGFA++ +
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV--------KGR 195
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 196 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 254
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 255 KVRFPS--HFSSDLKDLLRNLL 274
Score = 28.5 bits (62), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/83 (20%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L + + +
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFK 112
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEYA G + +R+
Sbjct: 113 DNSNLYMVMEYAPGGEMFSHLRR 135
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENL++D + IK++DFGFA++ +
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV--------KGR 195
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 196 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 254
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 255 KVRFPS--HFSSDLKDLLRNLL 274
Score = 28.5 bits (62), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/83 (20%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L + + +
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFK 112
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEYA G + +R+
Sbjct: 113 DNSNLYMVMEYAPGGEMFSHLRR 135
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENL++D + IK++DFGFA++ +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV--------KGR 194
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 254 KVRFPS--HFSSDLKDLLRNLL 273
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/83 (20%), Positives = 36/83 (43%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEYA G + +R+
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRR 134
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENL++D + IK++DFGFA++ +
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV--------KGR 195
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 196 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 254
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 255 KVRFPS--HFSSDLKDLLRNLL 274
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/83 (20%), Positives = 36/83 (43%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 53 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEYA G + +R+
Sbjct: 113 DNSNLYMVMEYAPGGEMFSHLRR 135
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENL++D + IK++DFGFA++ +
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV--------KGR 195
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 196 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 254
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 255 KVRFPS--HFSSDLKDLLRNLL 274
Score = 28.5 bits (62), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 17/83 (20%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L + + +
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFK 112
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEYA G + +R+
Sbjct: 113 DNSNLYMVMEYAPGGEMFSHLRR 135
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 80/153 (52%), Gaps = 14/153 (9%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCEN-LLLDDKYN--IKLSDFGFARKYSVN 63
+ A R + A+ YCHK +V HRD+K EN L L D + +KL DFG A ++
Sbjct: 103 FRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG 162
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFD-DTNYS 122
+ T G+ Y SP++L+G+ Y P + D WS GV+++ ++ G PF T+
Sbjct: 163 ------KMMRTKVGTPYYVSPQVLEGL-YGP-ECDEWSAGVMMYVLLCGYPPFSAPTDXE 214
Query: 123 ELLKQVQKRVVFPESPRLSSSCKA--LISNILS 153
+LK + FPE L+ S +A LI +L+
Sbjct: 215 VMLKIREGTFTFPEKDWLNVSPQAESLIRRLLT 247
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 202 SSYATVKLATS-ARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAI 260
S+ VK+A + A KI +D K+ EIE++K L HPN+IR +
Sbjct: 20 GSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQ----EIEIMKSLDHPNIIRLYETF 75
Query: 261 ETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
E +Y++ME G L E + +R E A
Sbjct: 76 EDNTDIYLVMELCTGGELFERVVHKRVFRESDA 108
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 14/122 (11%)
Query: 5 LDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKY---- 60
L+ D+ R F Q+ +A+ Y H + ++HRD+K N+ +D+ N+K+ DFG A+
Sbjct: 111 LNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 61 ------SVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRL 114
S N NL+ G+ Y + E+L G + ++ D++S+G++ F M+Y
Sbjct: 171 DILKLDSQNLPGSSDNLTSA-IGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY--- 226
Query: 115 PF 116
PF
Sbjct: 227 PF 228
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 214 RHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYA 273
RH+++ I+S+V +++ R L+ N ++ + A++ ++I MEY
Sbjct: 40 RHTEEKLSTILSEVMLLASLNHQYVVRY--YAAWLERRNFVKPMTAVKKKSTLFIQMEYC 97
Query: 274 KNGSLLEVIRKE 285
+NG+L ++I E
Sbjct: 98 ENGTLYDLIHSE 109
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 5/126 (3%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
A+ + QL + I YCH + V+HRD+K +NLL++ + +K++DFG AR + + Y +
Sbjct: 102 AKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEV 161
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKR 131
+ Y +P++L G DIWS+G + MV G F + ++ L ++ +
Sbjct: 162 VTLW-----YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRI 216
Query: 132 VVFPES 137
+ P S
Sbjct: 217 LGTPNS 222
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 240 REIEVVKGLKHPNLIRFLQAIETTHRVYIIMEY 272
REI ++K LKH N+++ I T R+ ++ E+
Sbjct: 49 REISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 5/126 (3%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
A+ + QL + I YCH + V+HRD+K +NLL++ + +K++DFG AR + + Y +
Sbjct: 102 AKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEV 161
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKR 131
+ Y +P++L G DIWS+G + MV G F + ++ L ++ +
Sbjct: 162 VTLW-----YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRI 216
Query: 132 VVFPES 137
+ P S
Sbjct: 217 LGTPNS 222
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 240 REIEVVKGLKHPNLIRFLQAIETTHRVYIIMEY 272
REI ++K LKH N+++ I T R+ ++ E+
Sbjct: 49 REISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 66/120 (55%), Gaps = 8/120 (6%)
Query: 28 KKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGSYAYASPEIL 87
K ++HRD+K N+L++ + IKL DFG + + +++ +F G+ +Y SPE L
Sbjct: 142 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-------DSMANSFVGTRSYMSPERL 194
Query: 88 KGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPESPRLSSSCKAL 147
+G Y+ QSDIWSMG+ L M GR P + S + ++ +V P+L S +L
Sbjct: 195 QGTHYS-VQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSL 253
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 240 REIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDE 290
RE++V+ P ++ F A + + I ME+ GSL +V++K I E
Sbjct: 72 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE 122
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 80/153 (52%), Gaps = 14/153 (9%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCEN-LLLDDKYN--IKLSDFGFARKYSVN 63
+ A R + A+ YCHK +V HRD+K EN L L D + +KL DFG A ++
Sbjct: 120 FRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG 179
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFD-DTNYS 122
+ T G+ Y SP++L+G+ Y P + D WS GV+++ ++ G PF T+
Sbjct: 180 ------KMMRTKVGTPYYVSPQVLEGL-YGP-ECDEWSAGVMMYVLLCGYPPFSAPTDXE 231
Query: 123 ELLKQVQKRVVFPESPRLSSSCKA--LISNILS 153
+LK + FPE L+ S +A LI +L+
Sbjct: 232 VMLKIREGTFTFPEKDWLNVSPQAESLIRRLLT 264
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 202 SSYATVKLATS-ARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAI 260
S+ VK+A + A KI +D K+ EIE++K L HPN+IR +
Sbjct: 37 GSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQ----EIEIMKSLDHPNIIRLYETF 92
Query: 261 ETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
E +Y++ME G L E + +R E A
Sbjct: 93 EDNTDIYLVMELCTGGELFERVVHKRVFRESDA 125
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + I+++DFGFA++ +
Sbjct: 136 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--------KGR 187
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 188 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 246
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 247 KVRFPS--HFSSDLKDLLRNLL 266
Score = 28.1 bits (61), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 45 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 104
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 105 DNSNLYMVMEYVPGGEMFSHLRR 127
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 21/166 (12%)
Query: 19 LADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVNNTDYKQNLSETF 75
+ AI + H ++ HRD+K ENLL K +KL+DFGFA++ + QN +T
Sbjct: 137 IGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT-------QNALQTP 189
Query: 76 CGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVF- 134
C + Y +PE+L Y + D+WS+GV+++ ++ G PF + +++R+
Sbjct: 190 CYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLG 248
Query: 135 ------PESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKE 172
PE +S K LI +L P + R+ + PW+ +
Sbjct: 249 QYGFPNPEWSEVSEDAKQLIRLLLKTDPTE-RLTITQFMNHPWINQ 293
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 78/139 (56%), Gaps = 13/139 (9%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+ +++ H++++++RD+K EN+LLDD N+++SD G A + T K +
Sbjct: 296 AQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK-----GYA 350
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF----DDTNYSELLKQV-QKR 131
G+ + +PE+L G Y D +++GV L+ M+ R PF + EL ++V ++
Sbjct: 351 GTPGFMAPELLLGEEYD-FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQA 409
Query: 132 VVFPE--SPRLSSSCKALI 148
V +P+ SP C+AL+
Sbjct: 410 VTYPDKFSPASKDFCEALL 428
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + I+++DFGFA++ +
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--------KGR 195
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 196 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 254
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 255 KVRFPS--HFSSDLKDLLRNLL 274
Score = 28.1 bits (61), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 53 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRR 135
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 78/139 (56%), Gaps = 13/139 (9%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+ +++ H++++++RD+K EN+LLDD N+++SD G A + T K +
Sbjct: 296 AQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK-----GYA 350
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF----DDTNYSELLKQV-QKR 131
G+ + +PE+L G Y D +++GV L+ M+ R PF + EL ++V ++
Sbjct: 351 GTPGFMAPELLLGEEYD-FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQA 409
Query: 132 VVFPE--SPRLSSSCKALI 148
V +P+ SP C+AL+
Sbjct: 410 VTYPDKFSPASKDFCEALL 428
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + I+++DFGFA++ +
Sbjct: 136 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--------KGR 187
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 188 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 246
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 247 KVRFPS--HFSSDLKDLLRNLL 266
Score = 28.1 bits (61), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 45 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 104
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 105 DNSNLYMVMEYVPGGEMFSHLRR 127
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 78/139 (56%), Gaps = 13/139 (9%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+ +++ H++++++RD+K EN+LLDD N+++SD G A + T K +
Sbjct: 296 AQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK-----GYA 350
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF----DDTNYSELLKQV-QKR 131
G+ + +PE+L G Y D +++GV L+ M+ R PF + EL ++V ++
Sbjct: 351 GTPGFMAPELLLGEEYD-FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQA 409
Query: 132 VVFPE--SPRLSSSCKALI 148
V +P+ SP C+AL+
Sbjct: 410 VTYPDKFSPASKDFCEALL 428
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 21/166 (12%)
Query: 19 LADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVNNTDYKQNLSETF 75
+ AI + H ++ HRD+K ENLL K +KL+DFGFA++ + QN +T
Sbjct: 118 IGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT-------QNALQTP 170
Query: 76 CGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVF- 134
C + Y +PE+L Y + D+WS+GV+++ ++ G PF + +++R+
Sbjct: 171 CYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLG 229
Query: 135 ------PESPRLSSSCKALISNILS--PVKFRIQMEDIRQDPWLKE 172
PE +S K LI +L P + R+ + PW+ +
Sbjct: 230 QYGFPNPEWSEVSEDAKQLIRLLLKTDPTE-RLTITQFMNHPWINQ 274
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + I+++DFGFA++ +
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--------KGR 195
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 196 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 254
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 255 KVRFPS--HFSSDLKDLLRNLL 274
Score = 28.1 bits (61), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRR 135
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + I+++DFGFA++ +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--------KGR 194
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 254 KVRFPS--HFSSDLKDLLRNLL 273
Score = 28.1 bits (61), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRR 134
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + I+++DFGFA++ +
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--------KGR 195
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 196 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 254
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 255 KVRFPS--HFSSDLKDLLRNLL 274
Score = 27.7 bits (60), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRR 135
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + I+++DFGFA++ +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--------KGR 194
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 254 KVRFPS--HFSSDLKDLLRNLL 273
Score = 28.1 bits (61), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRR 134
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + I+++DFGFA++ +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--------KGR 194
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 254 KVRFPS--HFSSDLKDLLRNLL 273
Score = 28.1 bits (61), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRR 134
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + I+++DFGFA++ +
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--------KGR 195
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 196 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 254
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 255 KVRFPS--HFSSDLKDLLRNLL 274
Score = 27.7 bits (60), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 53 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRR 135
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + I+++DFGFA++ +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--------KGR 194
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 254 KVRFPS--HFSSDLKDLLRNLL 273
Score = 27.7 bits (60), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRR 134
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 77/147 (52%), Gaps = 12/147 (8%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTD 66
++ AR + +Q+ +Y H +++RD+K ENLL+D + I+++DFGFA++
Sbjct: 159 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------ 212
Query: 67 YKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELL 125
+ + CG+ Y +PEI+ Y + D W++GV+++ M G P F D
Sbjct: 213 --KGRTWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYE 269
Query: 126 KQVQKRVVFPESPRLSSSCKALISNIL 152
K V +V FP SS K L+ N+L
Sbjct: 270 KIVSGKVRFPS--HFSSDLKDLLRNLL 294
Score = 27.7 bits (60), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 73 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 132
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 133 DNSNLYMVMEYVPGGEMFSHLRR 155
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + I+++DFGFA++ +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--------KGR 194
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 254 KVRFPS--HFSSDLKDLLRNLL 273
Score = 28.1 bits (61), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRR 134
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + I+++DFGFA++ +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--------KGR 194
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 254 KVRFPS--HFSSDLKDLLRNLL 273
Score = 28.1 bits (61), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRR 134
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + I+++DFGFA++ +
Sbjct: 138 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--------KGR 189
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 190 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 248
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 249 KVRFPS--HFSSDLKDLLRNLL 268
Score = 28.5 bits (62), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 47 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 106
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 107 DNSNLYMVMEYVAGGEMFSHLRR 129
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + I+++DFGFA++ +
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--------KGR 195
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 196 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 254
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 255 KVRFPS--HFSSDLKDLLRNLL 274
Score = 27.7 bits (60), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 53 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRR 135
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + I+++DFGFA++ +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--------KGR 194
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 254 KVRFPS--HFSSDLKDLLRNLL 273
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 52 GSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFK 111
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRR 134
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + I+++DFGFA++ +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--------KGR 194
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 254 KVRFPS--HFSSDLKDLLRNLL 273
Score = 28.1 bits (61), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRR 134
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + I+++DFGFA++ +
Sbjct: 164 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--------KGR 215
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 216 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 274
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 275 KVRFPS--HFSSDLKDLLRNLL 294
Score = 28.1 bits (61), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 73 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 132
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 133 DNSNLYMVMEYVAGGEMFSHLRR 155
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + I+++DFGFA++ +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--------KGR 194
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 254 KVRFPS--HFSSDLKDLLRNLL 273
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 52 GSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFK 111
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRR 134
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + I+++DFGFA++ +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--------KGR 194
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 254 KVRFPS--HFSSDLKDLLRNLL 273
Score = 28.5 bits (62), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRR 134
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + I+++DFGFA++ +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--------KGR 194
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 254 KVRFPS--HFSSDLKDLLRNLL 273
Score = 28.5 bits (62), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRR 134
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + I+++DFGFA++ +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--------KGR 194
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 254 KVRFPS--HFSSDLKDLLRNLL 273
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 52 GSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFK 111
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRR 134
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + I+++DFGFA++ +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--------KGR 194
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSG 253
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 254 KVRFPS--HFSSDLKDLLRNLL 273
Score = 28.5 bits (62), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRR 134
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + I+++DFGFA++ +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--------KGR 194
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 254 KVRFPS--HFSSDLKDLLRNLL 273
Score = 28.5 bits (62), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRR 134
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + I+++DFGFA++ +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--------KGR 194
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 254 KVRFPS--HFSSDLKDLLRNLL 273
Score = 28.5 bits (62), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRR 134
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + I+++DFGFA++ +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--------KGR 194
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 254 KVRFPS--HFSSDLKDLLRNLL 273
Score = 28.1 bits (61), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRR 134
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 78/139 (56%), Gaps = 13/139 (9%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+ +++ H++++++RD+K EN+LLDD N+++SD G A + T K +
Sbjct: 296 AQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK-----GYA 350
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF----DDTNYSELLKQV-QKR 131
G+ + +PE+L G Y D +++GV L+ M+ R PF + EL ++V ++
Sbjct: 351 GTPGFMAPELLLGEEYD-FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQA 409
Query: 132 VVFPE--SPRLSSSCKALI 148
V +P+ SP C+AL+
Sbjct: 410 VTYPDKFSPASKDFCEALL 428
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + I+++DFGFA++ +
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--------KGR 195
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 196 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 254
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 255 KVRFPS--HFSSDLKDLLRNLL 274
Score = 28.5 bits (62), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 53 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 113 DNSNLYMVMEYVAGGEMFSHLRR 135
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + I+++DFGFA++ +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--------KGR 194
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 254 KVRFPS--HFSSDLKDLLRNLL 273
Score = 28.1 bits (61), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRR 134
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + I+++DFGFA++ +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--------KGR 194
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 254 KVRFPS--HFSSDLKDLLRNLL 273
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRR 134
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + I+++DFGFA++ +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--------KGR 194
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSG 253
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 254 KVRFPS--HFSSDLKDLLRNLL 273
Score = 28.5 bits (62), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRR 134
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 7/107 (6%)
Query: 20 ADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN-LSETFCGS 78
A+ I++ H+ +HRDIK N+LLD+ + K+SDFG AR + + Q + G+
Sbjct: 143 ANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARA----SEKFAQTVMXSRIVGT 198
Query: 79 YAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELL 125
AY +PE L+G TP +SDI+S GVVL ++ G D+ +LL
Sbjct: 199 TAYMAPEALRG-EITP-KSDIYSFGVVLLEIITGLPAVDEHREPQLL 243
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%)
Query: 222 KIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLE 280
K+ + V + LK+ +EI+V+ +H NL+ L + ++ Y NGSLL+
Sbjct: 61 KLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD 119
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 7/107 (6%)
Query: 20 ADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN-LSETFCGS 78
A+ I++ H+ +HRDIK N+LLD+ + K+SDFG AR + + Q + G+
Sbjct: 143 ANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARA----SEKFAQTVMXXRIVGT 198
Query: 79 YAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELL 125
AY +PE L+G TP +SDI+S GVVL ++ G D+ +LL
Sbjct: 199 TAYMAPEALRG-EITP-KSDIYSFGVVLLEIITGLPAVDEHREPQLL 243
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%)
Query: 222 KIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLE 280
K+ + V + LK+ +EI+V+ +H NL+ L + ++ Y NGSLL+
Sbjct: 61 KLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD 119
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENL++D + I+++DFGFA++ +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV--------KGR 194
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 254 KVRFPS--HFSSDLKDLLRNLL 273
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/83 (20%), Positives = 36/83 (43%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEYA G + +R+
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRR 134
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 63/107 (58%), Gaps = 7/107 (6%)
Query: 20 ADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET-FCGS 78
A+ I++ H+ +HRDIK N+LLD+ + K+SDFG AR + + Q + + G+
Sbjct: 134 ANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARA----SEKFAQXVXXSRIVGT 189
Query: 79 YAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELL 125
AY +PE L+G TP +SDI+S GVVL ++ G D+ +LL
Sbjct: 190 TAYXAPEALRG-EITP-KSDIYSFGVVLLEIITGLPAVDEHREPQLL 234
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 222 KIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLE 280
K+ + V + LK+ +EI+V +H NL+ L + ++ Y NGSLL+
Sbjct: 52 KLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLD 110
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 18/170 (10%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVNNTDYKQNL 71
+F Q+ A+ Y H+ ++HRD+K EN+LL + IK++DFG ++ + +L
Sbjct: 119 YFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG------ETSL 172
Query: 72 SETFCGSYAYASPEILKGVPYTP--QQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQ-- 127
T CG+ Y +PE+L V + D WS+GV+LF + G PF + LK
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 232
Query: 128 -VQKRVVFPES-PRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKED 173
K PE +S L+ +L P K R E+ + PWL+++
Sbjct: 233 TSGKYNFIPEVWAEVSEKALDLVKKLLVVDP-KARFTTEEALRHPWLQDE 281
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 205 ATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLP-----REIEVVKGLKHPNLIRFLQA 259
VKLA + + VAIKIISK + I ++ P EIE++K L HP +I+ ++
Sbjct: 24 GEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK-IKN 82
Query: 260 IETTHRVYIIMEYAKNGSLLEVIRKERYIDE 290
YI++E + G L + + + + E
Sbjct: 83 FFDAEDYYIVLELMEGGELFDKVVGNKRLKE 113
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 18/170 (10%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVNNTDYKQNL 71
+F Q+ A+ Y H+ ++HRD+K EN+LL + IK++DFG ++ + +L
Sbjct: 119 YFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG------ETSL 172
Query: 72 SETFCGSYAYASPEIL--KGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQ-- 127
T CG+ Y +PE+L G + D WS+GV+LF + G PF + LK
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 232
Query: 128 -VQKRVVFPES-PRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKED 173
K PE +S L+ +L P K R E+ + PWL+++
Sbjct: 233 TSGKYNFIPEVWAEVSEKALDLVKKLLVVDP-KARFTTEEALRHPWLQDE 281
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 205 ATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLP-----REIEVVKGLKHPNLIRFLQA 259
VKLA + + VAIKIISK + I ++ P EIE++K L HP +I+ ++
Sbjct: 24 GEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK-IKN 82
Query: 260 IETTHRVYIIMEYAKNGSLLEVIRKERYIDE 290
YI++E + G L + + + + E
Sbjct: 83 FFDAEDYYIVLELMEGGELFDKVVGNKRLKE 113
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 18/170 (10%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVNNTDYKQNL 71
+F Q+ A+ Y H+ ++HRD+K EN+LL + IK++DFG ++ + +L
Sbjct: 118 YFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG------ETSL 171
Query: 72 SETFCGSYAYASPEIL--KGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQ-- 127
T CG+ Y +PE+L G + D WS+GV+LF + G PF + LK
Sbjct: 172 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 231
Query: 128 -VQKRVVFPES-PRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKED 173
K PE +S L+ +L P K R E+ + PWL+++
Sbjct: 232 TSGKYNFIPEVWAEVSEKALDLVKKLLVVDP-KARFTTEEALRHPWLQDE 280
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 205 ATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLP-----REIEVVKGLKHPNLIRFLQA 259
VKLA + + VAIKIISK + I ++ P EIE++K L HP +I+ ++
Sbjct: 23 GEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK-IKN 81
Query: 260 IETTHRVYIIMEYAKNGSLLEVIRKERYIDE 290
YI++E + G L + + + + E
Sbjct: 82 FFDAEDYYIVLELMEGGELFDKVVGNKRLKE 112
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 18/170 (10%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVNNTDYKQNL 71
+F Q+ A+ Y H+ ++HRD+K EN+LL + IK++DFG ++ + +L
Sbjct: 125 YFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG------ETSL 178
Query: 72 SETFCGSYAYASPEILKGVPYTP--QQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQ-- 127
T CG+ Y +PE+L V + D WS+GV+LF + G PF + LK
Sbjct: 179 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 238
Query: 128 -VQKRVVFPES-PRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKED 173
K PE +S L+ +L P K R E+ + PWL+++
Sbjct: 239 TSGKYNFIPEVWAEVSEKALDLVKKLLVVDP-KARFTTEEALRHPWLQDE 287
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 205 ATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLP-----REIEVVKGLKHPNLIRFLQA 259
VKLA + + VAIKIISK + I ++ P EIE++K L HP +I+ ++
Sbjct: 30 GEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK-IKN 88
Query: 260 IETTHRVYIIMEYAKNGSLLEVIRKERYIDE 290
YI++E + G L + + + + E
Sbjct: 89 FFDAEDYYIVLELMEGGELFDKVVGNKRLKE 119
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 18/170 (10%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVNNTDYKQNL 71
+F Q+ A+ Y H+ ++HRD+K EN+LL + IK++DFG ++ + +L
Sbjct: 119 YFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG------ETSL 172
Query: 72 SETFCGSYAYASPEIL--KGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQ-- 127
T CG+ Y +PE+L G + D WS+GV+LF + G PF + LK
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 232
Query: 128 -VQKRVVFPES-PRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKED 173
K PE +S L+ +L P K R E+ + PWL+++
Sbjct: 233 TSGKYNFIPEVWAEVSEKALDLVKKLLVVDP-KARFTTEEALRHPWLQDE 281
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 205 ATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLP-----REIEVVKGLKHPNLIRFLQA 259
VKLA + + VAIKIISK + I ++ P EIE++K L HP +I+
Sbjct: 24 GEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF 83
Query: 260 IETTHRVYIIMEYAKNGSLLEVIRKERYIDE 290
+ YI++E + G L + + + + E
Sbjct: 84 FD-AEDYYIVLELMEGGELFDKVVGNKRLKE 113
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 7/107 (6%)
Query: 20 ADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN-LSETFCGS 78
A+ I++ H+ +HRDIK N+LLD+ + K+SDFG AR + + Q + G+
Sbjct: 137 ANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARA----SEKFAQXVMXXRIVGT 192
Query: 79 YAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELL 125
AY +PE L+G TP +SDI+S GVVL ++ G D+ +LL
Sbjct: 193 TAYMAPEALRG-EITP-KSDIYSFGVVLLEIITGLPAVDEHREPQLL 237
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%)
Query: 222 KIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLE 280
K+ + V + LK+ +EI+V+ +H NL+ L + ++ Y NGSLL+
Sbjct: 55 KLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD 113
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENL++D + I+++DFGFA++ +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV--------KGR 194
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 195 TWXLCGTPEYLAPEIIISKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 254 KVRFPS--HFSSDLKDLLRNLL 273
Score = 28.1 bits (61), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRR 134
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 18/170 (10%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVNNTDYKQNL 71
+F Q+ A+ Y H+ ++HRD+K EN+LL + IK++DFG ++ + +L
Sbjct: 258 YFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG------ETSL 311
Query: 72 SETFCGSYAYASPEIL--KGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQ-- 127
T CG+ Y +PE+L G + D WS+GV+LF + G PF + LK
Sbjct: 312 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 371
Query: 128 -VQKRVVFPES-PRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKED 173
K PE +S L+ +L P K R E+ + PWL+++
Sbjct: 372 TSGKYNFIPEVWAEVSEKALDLVKKLLVVDP-KARFTTEEALRHPWLQDE 420
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 205 ATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLP-----REIEVVKGLKHPNLIRFLQA 259
VKLA + + VAI+IISK + I ++ P EIE++K L HP +I+ ++
Sbjct: 163 GEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK-IKN 221
Query: 260 IETTHRVYIIMEYAKNGSLLEVIRKERYIDE 290
YI++E + G L + + + + E
Sbjct: 222 FFDAEDYYIVLELMEGGELFDKVVGNKRLKE 252
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 19/163 (11%)
Query: 22 AIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGSYAY 81
A+ H + V+HRDIK +++LL +KLSDFGF + S K G+ +
Sbjct: 128 ALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK-----XLVGTPYW 182
Query: 82 ASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPESPRL- 140
+PE++ +PY P + DIWS+G+++ MV G P+ + + +K ++ + PRL
Sbjct: 183 MAPELISRLPYGP-EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL----PPRLK 237
Query: 141 -----SSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSNP 176
S S K + +L P + R ++ + P+L + P
Sbjct: 238 NLHKVSPSLKGFLDRLLVRDPAQ-RATAAELLKHPFLAKAGPP 279
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S V +AT + VA+K K+ ++ L E+ +++ +H N++ +
Sbjct: 31 GSTGIVCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNLS 304
++++ME+ + G+L +++ R +E A +C + + LS
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALS 130
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 19/163 (11%)
Query: 22 AIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGSYAY 81
A+ H + V+HRDIK +++LL +KLSDFGF + S K G+ +
Sbjct: 137 ALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK-----XLVGTPYW 191
Query: 82 ASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPESPRL- 140
+PE++ +PY P + DIWS+G+++ MV G P+ + + +K ++ + PRL
Sbjct: 192 MAPELISRLPYGP-EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL----PPRLK 246
Query: 141 -----SSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSNP 176
S S K + +L P + R ++ + P+L + P
Sbjct: 247 NLHKVSPSLKGFLDRLLVRDPAQ-RATAAELLKHPFLAKAGPP 288
Score = 35.0 bits (79), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S V +AT + VA+K K+ ++ L E+ +++ +H N++ +
Sbjct: 40 GSTGIVCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNLS 304
++++ME+ + G+L +++ R +E A +C + + LS
Sbjct: 97 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALS 139
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENL++D + IK++DFG A++ +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV--------KGR 194
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 254 KVRFPS--HFSSDLKDLLRNLL 273
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/83 (20%), Positives = 36/83 (43%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEYA G + +R+
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRR 134
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 19/163 (11%)
Query: 22 AIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGSYAY 81
A+ H + V+HRDIK +++LL +KLSDFGF + S K G+ +
Sbjct: 132 ALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK-----XLVGTPYW 186
Query: 82 ASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPESPRL- 140
+PE++ +PY P + DIWS+G+++ MV G P+ + + +K ++ + PRL
Sbjct: 187 MAPELISRLPYGP-EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL----PPRLK 241
Query: 141 -----SSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSNP 176
S S K + +L P + R ++ + P+L + P
Sbjct: 242 NLHKVSPSLKGFLDRLLVRDPAQ-RATAAELLKHPFLAKAGPP 283
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S V +AT + VA+K K+ ++ L E+ +++ +H N++ +
Sbjct: 35 GSTGIVCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNLS 304
++++ME+ + G+L +++ R +E A +C + + LS
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALS 134
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 19/163 (11%)
Query: 22 AIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGSYAY 81
A+ H + V+HRDIK +++LL +KLSDFGF + S K G+ +
Sbjct: 139 ALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK-----XLVGTPYW 193
Query: 82 ASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPESPRL- 140
+PE++ +PY P + DIWS+G+++ MV G P+ + + +K ++ + PRL
Sbjct: 194 MAPELISRLPYGP-EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL----PPRLK 248
Query: 141 -----SSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSNP 176
S S K + +L P + R ++ + P+L + P
Sbjct: 249 NLHKVSPSLKGFLDRLLVRDPAQ-RATAAELLKHPFLAKAGPP 290
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S V +AT + VA+K K+ ++ L E+ +++ +H N++ +
Sbjct: 42 GSTGIVCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNLS 304
++++ME+ + G+L +++ R +E A +C + + LS
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALS 141
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 8/97 (8%)
Query: 28 KKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGSYAYASPEIL 87
K ++HRD+K N+L++ + IKL DFG + + +++ +F G+ +Y SPE L
Sbjct: 185 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-------DSMANSFVGTRSYMSPERL 237
Query: 88 KGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSEL 124
+G Y+ QSDIWSMG+ L M GR P + EL
Sbjct: 238 QGTHYS-VQSDIWSMGLSLVEMAVGRYPIPPPDAKEL 273
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 240 REIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDE 290
RE++V+ P ++ F A + + I ME+ GSL +V++K I E
Sbjct: 115 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE 165
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 19/163 (11%)
Query: 22 AIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGSYAY 81
A+ H + V+HRDIK +++LL +KLSDFGF + S K G+ +
Sbjct: 182 ALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK-----XLVGTPYW 236
Query: 82 ASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPESPRL- 140
+PE++ +PY P + DIWS+G+++ MV G P+ + + +K ++ + PRL
Sbjct: 237 MAPELISRLPYGP-EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL----PPRLK 291
Query: 141 -----SSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSNP 176
S S K + +L P + R ++ + P+L + P
Sbjct: 292 NLHKVSPSLKGFLDRLLVRDPAQ-RATAAELLKHPFLAKAGPP 333
Score = 34.7 bits (78), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S V +AT + VA+K K+ ++ L E+ +++ +H N++ +
Sbjct: 85 GSTGIVCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNLS 304
++++ME+ + G+L +++ R +E A +C + + LS
Sbjct: 142 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALS 184
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 86/183 (46%), Gaps = 27/183 (14%)
Query: 19 LADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVNNTDYKQNLSETF 75
+ +AI Y H ++ HRD+K ENLL K +KL+DFGFA++ + +N+ T
Sbjct: 170 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS------LTTP 223
Query: 76 CGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVF- 134
C + Y +PE+L Y + D WS+GV+ + ++ G PF + + + R+
Sbjct: 224 CYTPYYVAPEVLGPEKYD-KSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXG 282
Query: 135 ------PESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
PE +S K LI N+L P + R + + PW+ + S P+
Sbjct: 283 QYEFPNPEWSEVSEEVKXLIRNLLKTEPTQ-RXTITEFXNHPWIXQ-------STKVPQT 334
Query: 187 GIH 189
+H
Sbjct: 335 PLH 337
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 18/170 (10%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVNNTDYKQNL 71
+F Q+ A+ Y H+ ++HRD+K EN+LL + IK++DFG ++ + +L
Sbjct: 244 YFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG------ETSL 297
Query: 72 SETFCGSYAYASPEIL--KGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQ-- 127
T CG+ Y +PE+L G + D WS+GV+LF + G PF + LK
Sbjct: 298 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 357
Query: 128 -VQKRVVFPES-PRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKED 173
K PE +S L+ +L P K R E+ + PWL+++
Sbjct: 358 TSGKYNFIPEVWAEVSEKALDLVKKLLVVDP-KARFTTEEALRHPWLQDE 406
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 205 ATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLP-----REIEVVKGLKHPNLIRFLQA 259
VKLA + + VAI+IISK + I ++ P EIE++K L HP +I+ ++
Sbjct: 149 GEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK-IKN 207
Query: 260 IETTHRVYIIMEYAKNGSLLEVIRKERYIDE 290
YI++E + G L + + + + E
Sbjct: 208 FFDAEDYYIVLELMEGGELFDKVVGNKRLKE 238
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 81/164 (49%), Gaps = 19/164 (11%)
Query: 22 AIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGSYAY 81
A+ H + V+HRDIK +++LL +KLSDFGF + S K G+ +
Sbjct: 259 ALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK-----XLVGTPYW 313
Query: 82 ASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPESPRL- 140
+PE++ +PY P + DIWS+G+++ MV G P+ + + +K ++ + PRL
Sbjct: 314 MAPELISRLPYGP-EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL----PPRLK 368
Query: 141 -----SSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSNPV 177
S S K + +L P + R ++ + P+L + P
Sbjct: 369 NLHKVSPSLKGFLDRLLVRDPAQ-RATAAELLKHPFLAKAGPPA 411
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S V +AT + VA+K K+ ++ L E+ +++ +H N++ +
Sbjct: 162 GSTGIVCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNLS 304
++++ME+ + G+L +++ R +E A +C + + LS
Sbjct: 219 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALS 261
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 18/143 (12%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDD---KYNIKLSDFGFARKYSVNNTDYKQNLSET 74
Q+ +A+ Y H + VVH+D+K EN+L D IK+ DFG A + + S
Sbjct: 132 QMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH------STN 185
Query: 75 FCGSYAYASPEILK-GVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVV 133
G+ Y +PE+ K V + + DIWS GVV++ ++ G LPF T+ L++VQ++
Sbjct: 186 AAGTALYMAPEVFKRDVTF---KCDIWSAGVVMYFLLTGCLPFTGTS----LEEVQQKAT 238
Query: 134 FPESPRLSSSCKALISNILSPVK 156
+ E P + C+ L + +K
Sbjct: 239 YKE-PNYAVECRPLTPQAVDLLK 260
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISK--VQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQA 259
++ V L + IK I+K Q P++ ++ EIEV+K L HPN+I+ +
Sbjct: 33 GAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEA----EIEVLKSLDHPNIIKIFEV 88
Query: 260 IETTHRVYIIMEYAKNGSLLEVI 282
E H +YI+ME + G LLE I
Sbjct: 89 FEDYHNMYIVMETCEGGELLERI 111
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 89/167 (53%), Gaps = 21/167 (12%)
Query: 19 LADAIDYCHKKSVVHRDIKCENLL-LDDKYN---IKLSDFGFARKYSVNNTDYKQNLSET 74
+ ++Y H + VVHRD+K N+L +D+ N +++ DFGFA++ N L T
Sbjct: 130 IGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAEN-----GLLMT 184
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVV- 133
C + + +PE+LK Y + DIWS+G++L+ M+ G PF + S+ +++ R+
Sbjct: 185 PCYTANFVAPEVLKRQGYD-EGCDIWSLGILLYTMLAGYTPFAN-GPSDTPEEILTRIGS 242
Query: 134 --FPESP----RLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKE 172
F S +S + K L+S +L P + R+ + + Q PW+ +
Sbjct: 243 GKFTLSGGNWNTVSETAKDLVSKMLHVDPHQ-RLTAKQVLQHPWVTQ 288
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVV-KGLKHPNLIRFLQAI 260
SY+ K + + A+K+I K K+ EIE++ + +HPN+I
Sbjct: 38 GSYSECKRCVHKATNMEYAVKVIDKS-------KRDPSEEIEILLRYGQHPNIITLKDVY 90
Query: 261 ETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
+ VY++ E + G LL+ I ++++ E +A
Sbjct: 91 DDGKHVYLVTELMRGGELLDKILRQKFFSEREA 123
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 28/193 (14%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVN 63
+N +A +A A+D+ H K + HRD+K EN+L + +K+ DFG +N
Sbjct: 108 FNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLN 167
Query: 64 NTDYKQNLSE--TFCGSYAYASPEILKGVPYTP----QQSDIWSMGVVLFAMVYGRLPF- 116
+ E T CGS Y +PE+++ ++ D+WS+GV+L+ ++ G PF
Sbjct: 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFV 227
Query: 117 ----DDTNYSE----------LLKQVQK-RVVFPESPRLSSSCKA--LISNIL-SPVKFR 158
D + L + +Q+ + FP+ SC A LIS +L K R
Sbjct: 228 GRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQR 287
Query: 159 IQMEDIRQDPWLK 171
+ + Q PW++
Sbjct: 288 LSAAQVLQHPWVQ 300
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 56/102 (54%), Gaps = 4/102 (3%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVV-KGLKHPNLIRFLQAI 260
++A V+ + SQ+ A+KII K +++ + RE+E++ + H N++ ++
Sbjct: 24 GAHARVQTCINLITSQEYAVKIIEKQPG---HIRSRVFREVEMLYQCQGHRNVLELIEFF 80
Query: 261 ETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSN 302
E R Y++ E + GS+L I K R+ +E +A + +V++
Sbjct: 81 EEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVAS 122
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 8/97 (8%)
Query: 28 KKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGSYAYASPEIL 87
K ++HRD+K N+L++ + IKL DFG + + +++ +F G+ +Y SPE L
Sbjct: 150 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-------DSMANSFVGTRSYMSPERL 202
Query: 88 KGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSEL 124
+G Y+ QSDIWSMG+ L M GR P + EL
Sbjct: 203 QGTHYS-VQSDIWSMGLSLVEMAVGRYPIPPPDAKEL 238
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 240 REIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDE 290
RE++V+ P ++ F A + + I ME+ GSL +V++K I E
Sbjct: 80 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE 130
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 8/97 (8%)
Query: 28 KKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGSYAYASPEIL 87
K ++HRD+K N+L++ + IKL DFG + + +++ +F G+ +Y SPE L
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-------DSMANSFVGTRSYMSPERL 175
Query: 88 KGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSEL 124
+G Y+ QSDIWSMG+ L M GR P + EL
Sbjct: 176 QGTHYS-VQSDIWSMGLSLVEMAVGRYPIPPPDAKEL 211
Score = 31.6 bits (70), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 240 REIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDE 290
RE++V+ P ++ F A + + I ME+ GSL +V++K I E
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE 103
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 8/97 (8%)
Query: 28 KKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGSYAYASPEIL 87
K ++HRD+K N+L++ + IKL DFG + + +++ +F G+ +Y SPE L
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-------DSMANSFVGTRSYMSPERL 175
Query: 88 KGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSEL 124
+G Y+ QSDIWSMG+ L M GR P + EL
Sbjct: 176 QGTHYS-VQSDIWSMGLSLVEMAVGRYPIPPPDAKEL 211
Score = 31.6 bits (70), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 240 REIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDE 290
RE++V+ P ++ F A + + I ME+ GSL +V++K I E
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE 103
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 19/166 (11%)
Query: 19 LADAIDYCHKKSVVHRDIKCENLL-LDDKYN---IKLSDFGFARKYSVNNTDYKQNLSET 74
+ ++Y H + VVHRD+K N+L +D+ N +++ DFGFA++ N L T
Sbjct: 130 IGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAEN-----GLLMT 184
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF----DDTNYSELLKQVQK 130
C + + +PE+LK Y + DIWS+G++L+ M+ G PF DT L +
Sbjct: 185 PCYTANFVAPEVLKRQGYD-EGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSG 243
Query: 131 RVVFPES--PRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKE 172
+ +S + K L+S +L P + R+ + + Q PW+ +
Sbjct: 244 KFTLSGGNWNTVSETAKDLVSKMLHVDPHQ-RLTAKQVLQHPWVTQ 288
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVV-KGLKHPNLIRFLQAI 260
SY+ K + + A+K+I K K+ EIE++ + +HPN+I
Sbjct: 38 GSYSECKRCVHKATNMEYAVKVIDKS-------KRDPSEEIEILLRYGQHPNIITLKDVY 90
Query: 261 ETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
+ VY++ E + G LL+ I ++++ E +A
Sbjct: 91 DDGKHVYLVTELMRGGELLDKILRQKFFSEREA 123
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 81/163 (49%), Gaps = 19/163 (11%)
Query: 22 AIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGSYAY 81
A+ Y H + V+HRDIK +++LL IKLSDFGF + S K G+ +
Sbjct: 153 ALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRK-----XLVGTPYW 207
Query: 82 ASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPESPR-- 139
+PE++ +PY + DIWS+G+++ M+ G P+ ++E Q +R+ PR
Sbjct: 208 MAPEVISRLPYG-TEVDIWSLGIMVIEMIDGEPPY----FNEPPLQAMRRIRDSLPPRVK 262
Query: 140 ----LSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSNP 176
+SS + + +L P + R +++ P+LK P
Sbjct: 263 DLHKVSSVLRGFLDLMLVREPSQ-RATAQELLGHPFLKLAGPP 304
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S V +AT + VA+K K+ ++ L E+ +++ H N++ +
Sbjct: 56 GSTGIVCIATEKHTGKQVAVK---KMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNLS 304
++++ME+ + G+L +++ R +E A +C S + LS
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALS 155
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + I+++DFGFA++ +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--------KGR 194
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +P I+ Y + D W++GV+++ M G P F D K V
Sbjct: 195 TWXLCGTPEYLAPAIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 254 KVRFPS--HFSSDLKDLLRNLL 273
Score = 28.1 bits (61), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRR 134
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 8/97 (8%)
Query: 28 KKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGSYAYASPEIL 87
K ++HRD+K N+L++ + IKL DFG + + +++ +F G+ +Y SPE L
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-------DSMANSFVGTRSYMSPERL 175
Query: 88 KGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSEL 124
+G Y+ QSDIWSMG+ L M GR P + EL
Sbjct: 176 QGTHYS-VQSDIWSMGLSLVEMAVGRYPIPPPDAKEL 211
Score = 31.2 bits (69), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 240 REIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDE 290
RE++V+ P ++ F A + + I ME+ GSL +V++K I E
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE 103
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 8/97 (8%)
Query: 28 KKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGSYAYASPEIL 87
K ++HRD+K N+L++ + IKL DFG + + +++ +F G+ +Y SPE L
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-------DSMANSFVGTRSYMSPERL 175
Query: 88 KGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSEL 124
+G Y+ QSDIWSMG+ L M GR P + EL
Sbjct: 176 QGTHYS-VQSDIWSMGLSLVEMAVGRYPIPPPDAKEL 211
Score = 31.2 bits (69), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 240 REIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDE 290
RE++V+ P ++ F A + + I ME+ GSL +V++K I E
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE 103
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 63/108 (58%), Gaps = 6/108 (5%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
++ +DY H + +HRDIK N+LL ++ ++KL+DFG A + + +T K+N TF G
Sbjct: 128 EILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQ--LTDTQIKRN---TFVG 182
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELL 125
+ + +PE+++ Y ++DIWS+G+ + G P D + +L
Sbjct: 183 TPFWMAPEVIQQSAYD-SKADIWSLGITAIELAKGEPPNSDMHPMRVL 229
Score = 27.7 bits (60), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V R Q VAIKII +A + + + +EI V+ + ++ +
Sbjct: 34 GSFGEVFKGIDNRTQQVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSSYVTKYYGSYL 91
Query: 262 TTHRVYIIMEYAKNGSLLEVIR 283
+++IIMEY GS L+++R
Sbjct: 92 KGSKLWIIMEYLGGGSALDLLR 113
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 74/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENL++D + I+++DFG A++ +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV--------KGR 194
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 254 KVRFPS--HFSSDLKDLLRNLL 273
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/83 (20%), Positives = 36/83 (43%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEYA G + +R+
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRR 134
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 65/125 (52%), Gaps = 15/125 (12%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKY----NIKLSDFGFARKYSVNNT 65
D+A ++ Q+ D + Y H K + H D+K EN++L DK IKL DFG A K N
Sbjct: 108 DEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN- 166
Query: 66 DYKQNLSETFCGSYAYASPEILKGVPYTP--QQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++K G+ + +PEI V Y P ++D+WS+GV+ + ++ G PF E
Sbjct: 167 EFK-----NIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE 218
Query: 124 LLKQV 128
L +
Sbjct: 219 TLTNI 223
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 31/56 (55%)
Query: 238 LPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
+ RE+ +++ ++HPN+I E V +I+E G L + + ++ + ED+A
Sbjct: 55 IEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEA 110
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 13/166 (7%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q DA++Y H ++HRD+K N+L +IKL+DFG + K NT ++F G
Sbjct: 116 QTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK----NTRTXIQRRDSFIG 171
Query: 78 SYAYASPEIL-----KGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKR- 131
+ + +PE++ K PY ++D+WS+G+ L M P + N +L ++ K
Sbjct: 172 TPYWMAPEVVMCETSKDRPYD-YKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSE 230
Query: 132 -VVFPESPRLSSSCKALISNILSP-VKFRIQMEDIRQDPWLKEDSN 175
+ R SS+ K + L V R + Q P++ DSN
Sbjct: 231 PPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSN 276
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 11/42 (26%), Positives = 26/42 (61%)
Query: 241 EIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVI 282
EI+++ HPN+++ L A + ++I++E+ G++ V+
Sbjct: 57 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 98
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 62/108 (57%), Gaps = 6/108 (5%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
++ +DY H + +HRDIK N+LL + +KL+DFG A + + +T K+N TF G
Sbjct: 112 EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQ--LTDTQIKRN---TFVG 166
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELL 125
+ + +PE++K Y ++DIWS+G+ + G P + + ++L
Sbjct: 167 TPFWMAPEVIKQSAYD-SKADIWSLGITAIELARGEPPHSELHPMKVL 213
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 65/125 (52%), Gaps = 15/125 (12%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKY----NIKLSDFGFARKYSVNNT 65
D+A ++ Q+ D + Y H K + H D+K EN++L DK IKL DFG A K N
Sbjct: 115 DEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN- 173
Query: 66 DYKQNLSETFCGSYAYASPEILKGVPYTP--QQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++K G+ + +PEI V Y P ++D+WS+GV+ + ++ G PF E
Sbjct: 174 EFK-----NIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE 225
Query: 124 LLKQV 128
L +
Sbjct: 226 TLTNI 230
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 31/56 (55%)
Query: 238 LPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
+ RE+ +++ ++HPN+I E V +I+E G L + + ++ + ED+A
Sbjct: 62 IEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEA 117
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 65/125 (52%), Gaps = 15/125 (12%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKY----NIKLSDFGFARKYSVNNT 65
D+A ++ Q+ D + Y H K + H D+K EN++L DK IKL DFG A K N
Sbjct: 129 DEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN- 187
Query: 66 DYKQNLSETFCGSYAYASPEILKGVPYTP--QQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++K G+ + +PEI V Y P ++D+WS+GV+ + ++ G PF E
Sbjct: 188 EFK-----NIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE 239
Query: 124 LLKQV 128
L +
Sbjct: 240 TLTNI 244
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 31/56 (55%)
Query: 238 LPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
+ RE+ +++ ++HPN+I E V +I+E G L + + ++ + ED+A
Sbjct: 76 IEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEA 131
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 58/99 (58%), Gaps = 6/99 (6%)
Query: 22 AIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGSYAY 81
A+++ H V+HRDIK +N+LL ++KL+DFGF + + +Q+ T G+ +
Sbjct: 128 ALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP-----EQSKRSTMVGTPYW 182
Query: 82 ASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTN 120
+PE++ Y P + DIWS+G++ M+ G P+ + N
Sbjct: 183 MAPEVVTRKAYGP-KVDIWSLGIMAIEMIEGEPPYLNEN 220
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ TV A Q+VAI+ ++ Q P K+ + EI V++ K+PN++ +L +
Sbjct: 31 GASGTVYTAMDVATGQEVAIRQMNLQQQP---KKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDK-ALLC 296
++++MEY GSL +V+ E +DE + A +C
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV-TETCMDEGQIAAVC 122
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + I+++DFGFA++ +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--------KGR 194
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ G+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 195 TWXLAGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 254 KVRFPS--HFSSDLKDLLRNLL 273
Score = 28.1 bits (61), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRR 134
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + I+++DFGFA++ +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--------KGR 194
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ CG+ +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 195 TWXLCGTPEALAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 254 KVRFPS--HFSSDLKDLLRNLL 273
Score = 28.1 bits (61), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRR 134
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 64/113 (56%), Gaps = 6/113 (5%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
++ +DY H + +HRDIK N+LL + +KL+DFG A + + +T K+N TF G
Sbjct: 132 EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQ--LTDTQIKRN---TFVG 186
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQK 130
+ + +PE++K Y ++DIWS+G+ + G P + + ++L + K
Sbjct: 187 TPFWMAPEVIKQSAYD-SKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK 238
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 88/191 (46%), Gaps = 21/191 (10%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDD----KYNIKLSDFGFARKYSVNNT 65
++A + Q+ + + Y H + H D+K EN++L D K IK+ DFG A K
Sbjct: 114 EEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK-----I 168
Query: 66 DYKQNLSETFCGSYAYASPEILKGVPYTP--QQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
D+ F G+ A+ +PEI V Y P ++D+WS+GV+ + ++ G PF E
Sbjct: 169 DFGNEFKNIF-GTPAFVAPEI---VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNILSPV-----KFRIQMEDIRQDPWLKEDSNPVG 178
L V V + S+ AL + + + K R+ ++D Q PW+K
Sbjct: 225 TLANVSA-VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQA 283
Query: 179 KSKSAPEVGIH 189
S+ A V +
Sbjct: 284 LSRKASAVNME 294
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 35/65 (53%)
Query: 238 LPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCY 297
+ RE+ ++K ++HPN+I + E V +I+E G L + + ++ + E++A
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 298 SEVSN 302
++ N
Sbjct: 121 KQILN 125
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 8/96 (8%)
Query: 28 KKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGSYAYASPEIL 87
K ++HRD+K N+L++ + IKL DFG + + +++ +F G+ +Y SPE L
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-------DSMANSFVGTRSYMSPERL 175
Query: 88 KGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
+G Y+ QSDIWSMG+ L M GR P + E
Sbjct: 176 QGTHYS-VQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
Score = 31.6 bits (70), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 240 REIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDE 290
RE++V+ P ++ F A + + I ME+ GSL +V++K I E
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE 103
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 63/120 (52%), Gaps = 12/120 (10%)
Query: 28 KKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGSYAYASPEIL 87
K ++HRD+K N+L++ + IKL DFG + + ++ F G+ +Y SPE L
Sbjct: 126 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-------DEMANEFVGTRSYMSPERL 178
Query: 88 KGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPESPRLSSSCKAL 147
+G Y+ QSDIWSMG+ L M GR P ELL +V P+L S+ +L
Sbjct: 179 QGTHYS-VQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDY----IVNEPPPKLPSAVFSL 233
Score = 31.2 bits (69), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 240 REIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDE 290
RE++V+ P ++ F A + + I ME+ GSL +V++K I E
Sbjct: 56 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE 106
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 12/142 (8%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
AR + +Q+ +Y H +++RD+K ENLL+D + I+++DFGFA++ +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--------KGR 194
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLKQVQK 130
+ G+ Y +PEI+ Y + D W++GV+++ M G P F D K V
Sbjct: 195 TWXLXGTPEYLAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 131 RVVFPESPRLSSSCKALISNIL 152
+V FP SS K L+ N+L
Sbjct: 254 KVRFPS--HFSSDLKDLLRNLL 273
Score = 28.1 bits (61), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V L A+KI+ K + + E +++ + P L++ + +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+Y++MEY G + +R+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRR 134
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 56/97 (57%), Gaps = 8/97 (8%)
Query: 28 KKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGSYAYASPEIL 87
K ++HRD+K N+L++ + IKL DFG + + +++ +F G+ +Y +PE L
Sbjct: 133 KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-------DSMANSFVGTRSYMAPERL 185
Query: 88 KGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSEL 124
+G Y+ QSDIWSMG+ L + GR P + EL
Sbjct: 186 QGTHYS-VQSDIWSMGLSLVELAVGRYPIPPPDAKEL 221
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 29/52 (55%)
Query: 240 REIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDED 291
RE++V+ P ++ F A + + I ME+ GSL +V+++ + I E+
Sbjct: 63 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEE 114
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 14/122 (11%)
Query: 5 LDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKY---- 60
L+ D+ R F Q+ +A+ Y H + ++HR++K N+ +D+ N+K+ DFG A+
Sbjct: 111 LNQQRDEYWRLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 61 ------SVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRL 114
S N NL+ G+ Y + E+L G + ++ D +S+G++ F +Y
Sbjct: 171 DILKLDSQNLPGSSDNLTSA-IGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY--- 226
Query: 115 PF 116
PF
Sbjct: 227 PF 228
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 14/166 (8%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q DA++Y H ++HRD+K N+L +IKL+DFG + K NT Q ++F G
Sbjct: 143 QTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK----NTRXIQR-RDSFIG 197
Query: 78 SYAYASPEIL-----KGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKR- 131
+ + +PE++ K PY ++D+WS+G+ L M P + N +L ++ K
Sbjct: 198 TPYWMAPEVVMCETSKDRPYD-YKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSE 256
Query: 132 -VVFPESPRLSSSCKALISNILSP-VKFRIQMEDIRQDPWLKEDSN 175
+ R SS+ K + L V R + Q P++ DSN
Sbjct: 257 PPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSN 302
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 11/42 (26%), Positives = 26/42 (61%)
Query: 241 EIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVI 282
EI+++ HPN+++ L A + ++I++E+ G++ V+
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 125
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 65/113 (57%), Gaps = 19/113 (16%)
Query: 15 WFSQLADAIDYCHKKSVV---HRDIKCENLLLDDKYN--------IKLSDFGFARKYSVN 63
W Q+A ++Y H +++V HRD+K N+L+ K +K++DFG AR
Sbjct: 110 WAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR----- 164
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF 116
++ + + G+YA+ +PE+++ ++ + SD+WS GV+L+ ++ G +PF
Sbjct: 165 --EWHRTTKMSAAGAYAWMAPEVIRASMFS-KGSDVWSYGVLLWELLTGEVPF 214
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 240 REIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKER 286
+E ++ LKHPN+I + ++ME+A+ G L V+ +R
Sbjct: 55 QEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKR 101
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 61/114 (53%), Gaps = 10/114 (8%)
Query: 9 TDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYK 68
+ AR + +++ AID H+ VHRDIK +N+LLD +I+L+DFG K + T
Sbjct: 161 AEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGT--- 217
Query: 69 QNLSETFCGSYAYASPEILKGVPYTPQ------QSDIWSMGVVLFAMVYGRLPF 116
S G+ Y SPEIL+ V P + D W++GV + M YG+ PF
Sbjct: 218 -VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF 270
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 14/166 (8%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q DA++Y H ++HRD+K N+L +IKL+DFG + K NT Q ++F G
Sbjct: 143 QTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK----NTRTIQR-RDSFIG 197
Query: 78 SYAYASPEIL-----KGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKR- 131
+ + +PE++ K PY ++D+WS+G+ L M P + N +L ++ K
Sbjct: 198 TPYWMAPEVVMCETSKDRPYD-YKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSE 256
Query: 132 -VVFPESPRLSSSCKALISNILSP-VKFRIQMEDIRQDPWLKEDSN 175
+ R SS+ K + L V R + Q P++ DSN
Sbjct: 257 PPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSN 302
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 11/42 (26%), Positives = 26/42 (61%)
Query: 241 EIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVI 282
EI+++ HPN+++ L A + ++I++E+ G++ V+
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 125
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 11/142 (7%)
Query: 14 RWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSE 73
R+ Q+A+ + Y K +HRD+ NLLL + +K+ DFG R N+ Y + E
Sbjct: 119 RYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV--MQE 176
Query: 74 TFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQKRV 132
+A+ +PE LK ++ SD W GV L+ M YG+ P+ N S++L ++ K
Sbjct: 177 HRKVPFAWCAPESLKTRTFS-HASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK-- 233
Query: 133 VFPESPRL--SSSCKALISNIL 152
E RL C I N++
Sbjct: 234 ---EGERLPRPEDCPQDIYNVM 252
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 11/73 (15%)
Query: 219 VAIK-----IISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYA 273
VA+K ++S+ +A D++ RE+ + L H NLIR L + T + ++ E A
Sbjct: 43 VAVKCLKPDVLSQPEAMDDFI-----REVNAMHSLDHRNLIR-LYGVVLTPPMKMVTELA 96
Query: 274 KNGSLLEVIRKER 286
GSLL+ +RK +
Sbjct: 97 PLGSLLDRLRKHQ 109
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 58/99 (58%), Gaps = 6/99 (6%)
Query: 22 AIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGSYAY 81
A+++ H V+HR+IK +N+LL ++KL+DFGF + + +Q+ T G+ +
Sbjct: 129 ALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITP-----EQSKRSTMVGTPYW 183
Query: 82 ASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTN 120
+PE++ Y P + DIWS+G++ M+ G P+ + N
Sbjct: 184 MAPEVVTRKAYGP-KVDIWSLGIMAIEMIEGEPPYLNEN 221
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ TV A Q+VAI+ ++ Q P K+ + EI V++ K+PN++ +L +
Sbjct: 32 GASGTVYTAMDVATGQEVAIRQMNLQQQP---KKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDK-ALLC 296
++++MEY GSL +V+ E +DE + A +C
Sbjct: 89 VGDELWVVMEYLAGGSLTDVV-TETCMDEGQIAAVC 123
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 56/101 (55%)
Query: 16 FSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETF 75
++ + ++Y HK +HRD+K N+LL + +++++DFG + + + + +TF
Sbjct: 122 LREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 181
Query: 76 CGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF 116
G+ + +PE+++ V ++DIWS G+ + G P+
Sbjct: 182 VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 222
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIIS--KVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQA 259
+ A V+ A A + VAIK I+ K Q +D L K EI+ + HPN++ + +
Sbjct: 21 GATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLK----EIQAMSQCHHPNIVSYYTS 76
Query: 260 IETTHRVYIIMEYAKNGSLLEVIR 283
++++M+ GS+L++I+
Sbjct: 77 FVVKDELWLVMKLLSGGSVLDIIK 100
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 56/99 (56%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
++ + ++Y HK +HRD+K N+LL + +++++DFG + + + + +TF G
Sbjct: 129 EVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 188
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF 116
+ + +PE+++ V ++DIWS G+ + G P+
Sbjct: 189 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 227
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIIS--KVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQA 259
+ A V+ A A + VAIK I+ K Q +D L K EI+ + HPN++ + +
Sbjct: 26 GATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLK----EIQAMSQCHHPNIVSYYTS 81
Query: 260 IETTHRVYIIMEYAKNGSLLEVIR 283
++++M+ GS+L++I+
Sbjct: 82 FVVKDELWLVMKLLSGGSVLDIIK 105
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQ 69
+ R + QL + Y H V+HRD+K NLL+++ +K+ DFG AR + +++
Sbjct: 158 EHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 217
Query: 70 NLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
++E + + Y +PE++ + Q D+WS+G + M+ R F NY L+ +
Sbjct: 218 FMTE-YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLI 275
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 64/121 (52%), Gaps = 8/121 (6%)
Query: 5 LDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNN 64
LDY +++ Q+ + I +CH +++HRDIK EN+L+ +KL DFGFAR +
Sbjct: 121 LDYQV--VQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 178
Query: 65 TDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF-DDTNYSE 123
Y ++ + Y +PE+L G + D+W++G ++ M G F D++ +
Sbjct: 179 EVYDDEVATRW-----YRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQ 233
Query: 124 L 124
L
Sbjct: 234 L 234
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYL-KKFLPREIEVVKGLKHPNLIRFLQAI 260
SY V + + VAIK +++ D + KK REI+++K L+H NL+ L+
Sbjct: 36 GSYGMVMKCRNKDTGRIVAIKKF--LESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVC 93
Query: 261 ETTHRVYIIMEYA 273
+ R Y++ E+
Sbjct: 94 KKKKRWYLVFEFV 106
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 11/142 (7%)
Query: 14 RWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSE 73
R+ Q+A+ + Y K +HRD+ NLLL + +K+ DFG R N+ Y + E
Sbjct: 115 RYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV--MQE 172
Query: 74 TFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQKRV 132
+A+ +PE LK ++ SD W GV L+ M YG+ P+ N S++L ++ K
Sbjct: 173 HRKVPFAWCAPESLKTRTFS-HASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK-- 229
Query: 133 VFPESPRL--SSSCKALISNIL 152
E RL C I N++
Sbjct: 230 ---EGERLPRPEDCPQDIYNVM 248
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 11/73 (15%)
Query: 219 VAIK-----IISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYA 273
VA+K ++S+ +A D++ RE+ + L H NLIR L + T + ++ E A
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFI-----REVNAMHSLDHRNLIR-LYGVVLTPPMKMVTELA 92
Query: 274 KNGSLLEVIRKER 286
GSLL+ +RK +
Sbjct: 93 PLGSLLDRLRKHQ 105
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 64/113 (56%), Gaps = 6/113 (5%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
++ +DY H + +HRDIK N+LL ++ ++KL+DFG A + + +T K+N F G
Sbjct: 124 EILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQ--LTDTQIKRN---XFVG 178
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQK 130
+ + +PE++K Y ++DIWS+G+ + G P D + +L + K
Sbjct: 179 TPFWMAPEVIKQSAYD-FKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPK 230
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 240 REIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIR----KERYI 288
+EI V+ P + R+ + + +++IIMEY GS L++++ +E YI
Sbjct: 66 QEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYI 118
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 11/142 (7%)
Query: 14 RWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSE 73
R+ Q+A+ + Y K +HRD+ NLLL + +K+ DFG R N+ Y + E
Sbjct: 125 RYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV--MQE 182
Query: 74 TFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQKRV 132
+A+ +PE LK ++ SD W GV L+ M YG+ P+ N S++L ++ K
Sbjct: 183 HRKVPFAWCAPESLKTRTFS-HASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK-- 239
Query: 133 VFPESPRL--SSSCKALISNIL 152
E RL C I N++
Sbjct: 240 ---EGERLPRPEDCPQDIYNVM 258
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 11/73 (15%)
Query: 219 VAIK-----IISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYA 273
VA+K ++S+ +A D++ RE+ + L H NLIR L + T + ++ E A
Sbjct: 49 VAVKCLKPDVLSQPEAMDDFI-----REVNAMHSLDHRNLIR-LYGVVLTPPMKMVTELA 102
Query: 274 KNGSLLEVIRKER 286
GSLL+ +RK +
Sbjct: 103 PLGSLLDRLRKHQ 115
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 11/142 (7%)
Query: 14 RWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSE 73
R+ Q+A+ + Y K +HRD+ NLLL + +K+ DFG R N+ Y + E
Sbjct: 119 RYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV--MQE 176
Query: 74 TFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQKRV 132
+A+ +PE LK ++ SD W GV L+ M YG+ P+ N S++L ++ K
Sbjct: 177 HRKVPFAWCAPESLKTRTFS-HASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK-- 233
Query: 133 VFPESPRL--SSSCKALISNIL 152
E RL C I N++
Sbjct: 234 ---EGERLPRPEDCPQDIYNVM 252
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 11/73 (15%)
Query: 219 VAIK-----IISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYA 273
VA+K ++S+ +A D++ RE+ + L H NLIR L + T + ++ E A
Sbjct: 43 VAVKCLKPDVLSQPEAMDDFI-----REVNAMHSLDHRNLIR-LYGVVLTPPMKMVTELA 96
Query: 274 KNGSLLEVIRKER 286
GSLL+ +RK +
Sbjct: 97 PLGSLLDRLRKHQ 109
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 11/142 (7%)
Query: 14 RWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSE 73
R+ Q+A+ + Y K +HRD+ NLLL + +K+ DFG R N+ Y + E
Sbjct: 115 RYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV--MQE 172
Query: 74 TFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQKRV 132
+A+ +PE LK ++ SD W GV L+ M YG+ P+ N S++L ++ K
Sbjct: 173 HRKVPFAWCAPESLKTRTFS-HASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK-- 229
Query: 133 VFPESPRL--SSSCKALISNIL 152
E RL C I N++
Sbjct: 230 ---EGERLPRPEDCPQDIYNVM 248
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 11/73 (15%)
Query: 219 VAIK-----IISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYA 273
VA+K ++S+ +A D++ RE+ + L H NLIR L + T + ++ E A
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFI-----REVNAMHSLDHRNLIR-LYGVVLTPPMKMVTELA 92
Query: 274 KNGSLLEVIRKER 286
GSLL+ +RK +
Sbjct: 93 PLGSLLDRLRKHQ 105
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 11/145 (7%)
Query: 14 RWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSE 73
++F QL A+++ H + V+HRDIK N+ + +KL D G R +S T +
Sbjct: 140 KYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT-----AAH 194
Query: 74 TFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF--DDTNYSELLKQVQKR 131
+ G+ Y SPE + Y +SDIWS+G +L+ M + PF D N L K++++
Sbjct: 195 SLVGTPYYMSPERIHENGYN-FKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQ- 252
Query: 132 VVFPESP--RLSSSCKALISNILSP 154
+P P S + L++ ++P
Sbjct: 253 CDYPPLPSDHYSEELRQLVNMCINP 277
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 240 REIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIR 283
+EI+++K L HPN+I++ + + + I++E A G L +I+
Sbjct: 81 KEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIK 124
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 61/108 (56%), Gaps = 6/108 (5%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
++ +DY H + +HRDIK N+LL + +KL+DFG A + + +T K+N F G
Sbjct: 112 EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQ--LTDTQIKRN---XFVG 166
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELL 125
+ + +PE++K Y ++DIWS+G+ + G P + + ++L
Sbjct: 167 TPFWMAPEVIKQSAYD-SKADIWSLGITAIELARGEPPHSELHPMKVL 213
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 61/108 (56%), Gaps = 6/108 (5%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
++ +DY H + +HRDIK N+LL + +KL+DFG A + + +T K+N F G
Sbjct: 127 EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQ--LTDTQIKRN---XFVG 181
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELL 125
+ + +PE++K Y ++DIWS+G+ + G P + + ++L
Sbjct: 182 TPFWMAPEVIKQSAYD-SKADIWSLGITAIELARGEPPHSELHPMKVL 228
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 57/99 (57%), Gaps = 6/99 (6%)
Query: 22 AIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGSYAY 81
A+++ H V+HRDIK +N+LL ++KL+DFGF + + +Q+ G+ +
Sbjct: 128 ALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP-----EQSKRSXMVGTPYW 182
Query: 82 ASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTN 120
+PE++ Y P + DIWS+G++ M+ G P+ + N
Sbjct: 183 MAPEVVTRKAYGP-KVDIWSLGIMAIEMIEGEPPYLNEN 220
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ TV A Q+VAI+ ++ Q P K+ + EI V++ K+PN++ +L +
Sbjct: 31 GASGTVYTAMDVATGQEVAIRQMNLQQQP---KKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDK-ALLC 296
++++MEY GSL +V+ E +DE + A +C
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV-TETCMDEGQIAAVC 122
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 57/99 (57%), Gaps = 6/99 (6%)
Query: 22 AIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGSYAY 81
A+++ H V+HRDIK +N+LL ++KL+DFGF + + +Q+ G+ +
Sbjct: 129 ALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP-----EQSKRSXMVGTPYW 183
Query: 82 ASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTN 120
+PE++ Y P + DIWS+G++ M+ G P+ + N
Sbjct: 184 MAPEVVTRKAYGP-KVDIWSLGIMAIEMIEGEPPYLNEN 221
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ TV A Q+VAI+ ++ Q P K+ + EI V++ K+PN++ +L +
Sbjct: 32 GASGTVYTAMDVATGQEVAIRQMNLQQQP---KKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDK-ALLC 296
++++MEY GSL +V+ E +DE + A +C
Sbjct: 89 VGDELWVVMEYLAGGSLTDVV-TETCMDEGQIAAVC 123
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQ 69
+ R + QL + Y H V+HRD+K NLL+++ +K+ DFG AR + +++
Sbjct: 159 EHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 218
Query: 70 NLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
++E + + Y +PE++ + Q D+WS+G + M+ R F NY L+ +
Sbjct: 219 FMTE-YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLI 276
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 19/164 (11%)
Query: 19 LADAIDYCHKKSVVHRDIKCENLL-LDDKYN---IKLSDFGFARKYSVNNTDYKQNLSET 74
+ ++Y H + VVHRD+K N+L +D+ N I++ DFGFA++ N L T
Sbjct: 125 ITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN-----GLLMT 179
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF----DDTNYSELLKQVQK 130
C + + +PE+L+ Y DIWS+GV+L+ M+ G PF DDT L +
Sbjct: 180 PCYTANFVAPEVLERQGYD-AACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSG 238
Query: 131 RVVFPES--PRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWL 170
+ +S + K L+S +L P + R+ + + PW+
Sbjct: 239 KFSLSGGYWNSVSDTAKDLVSKMLHVDPHQ-RLTAALVLRHPWI 281
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVV-KGLKHPNLIRFLQAI 260
SY+ K + + A+KII K K+ EIE++ + +HPN+I
Sbjct: 33 GSYSVCKRCIHKATNMEFAVKIIDKS-------KRDPTEEIEILLRYGQHPNIITLKDVY 85
Query: 261 ETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
+ VY++ E K G LL+ I ++++ E +A
Sbjct: 86 DDGKYVYVVTELMKGGELLDKILRQKFFSEREA 118
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 80/166 (48%), Gaps = 14/166 (8%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q DA++Y H ++HRD+K N+L +IKL+DFG + K NT Q + F G
Sbjct: 143 QTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK----NTRXIQR-RDXFIG 197
Query: 78 SYAYASPEIL-----KGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKR- 131
+ + +PE++ K PY ++D+WS+G+ L M P + N +L ++ K
Sbjct: 198 TPYWMAPEVVMCETSKDRPYD-YKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSE 256
Query: 132 -VVFPESPRLSSSCKALISNILSP-VKFRIQMEDIRQDPWLKEDSN 175
+ R SS+ K + L V R + Q P++ DSN
Sbjct: 257 PPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSN 302
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 11/42 (26%), Positives = 26/42 (61%)
Query: 241 EIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVI 282
EI+++ HPN+++ L A + ++I++E+ G++ V+
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 125
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 19/171 (11%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKY----NIKLSDFGFARKYSVNNT 65
++A + Q+ D ++Y H K + H D+K EN++L DK +IKL DFG A + +
Sbjct: 115 EEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGV 173
Query: 66 DYKQNLSETFCGSYAYASPEILKGVPYTP--QQSDIWSMGVVLFAMVYGRLPF-DDTNYS 122
++K G+ + +PEI V Y P ++D+WS+GV+ + ++ G PF DT
Sbjct: 174 EFK-----NIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
Query: 123 ELLKQVQKRVVFPES--PRLSSSCKALISNIL-SPVKFRIQMEDIRQDPWL 170
L F E + S K I +L + R+ +++ + PW+
Sbjct: 226 TLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYL---KKFLPREIEVVKGLKHPNLIRFLQ 258
+A VK + A K I K Q+ ++ + RE+ +++ + H N+I
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHD 82
Query: 259 AIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
E V +I+E G L + + ++ + E++A
Sbjct: 83 VYENRTDVVLILELVSGGELFDFLAQKESLSEEEA 117
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 19/171 (11%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKY----NIKLSDFGFARKYSVNNT 65
++A + Q+ D ++Y H K + H D+K EN++L DK +IKL DFG A + +
Sbjct: 115 EEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGV 173
Query: 66 DYKQNLSETFCGSYAYASPEILKGVPYTP--QQSDIWSMGVVLFAMVYGRLPF-DDTNYS 122
++K G+ + +PEI V Y P ++D+WS+GV+ + ++ G PF DT
Sbjct: 174 EFK-----NIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
Query: 123 ELLKQVQKRVVFPES--PRLSSSCKALISNIL-SPVKFRIQMEDIRQDPWL 170
L F E S K I +L + R+ +++ + PW+
Sbjct: 226 TLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPI---DYLKKFLPREIEVVKGLKHPNLIRFLQ 258
+A VK + A K I K Q+ ++ + RE+ +++ + H N+I
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHD 82
Query: 259 AIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
E V +I+E G L + + ++ + E++A
Sbjct: 83 VYENRTDVVLILELVSGGELFDFLAQKESLSEEEA 117
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 57/99 (57%), Gaps = 6/99 (6%)
Query: 22 AIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGSYAY 81
A+++ H V+HRDIK +N+LL ++KL+DFGF + + +Q+ G+ +
Sbjct: 128 ALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP-----EQSKRSEMVGTPYW 182
Query: 82 ASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTN 120
+PE++ Y P + DIWS+G++ M+ G P+ + N
Sbjct: 183 MAPEVVTRKAYGP-KVDIWSLGIMAIEMIEGEPPYLNEN 220
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ TV A Q+VAI+ ++ Q P K+ + EI V++ K+PN++ +L +
Sbjct: 31 GASGTVYTAMDVATGQEVAIRQMNLQQQP---KKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDK-ALLC 296
++++MEY GSL +V+ E +DE + A +C
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV-TETCMDEGQIAAVC 122
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 21/191 (10%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDD----KYNIKLSDFGFARKYSVNNT 65
++A + Q+ + + Y H + H D+K EN++L D K IK+ DFG A K
Sbjct: 114 EEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK-----I 168
Query: 66 DYKQNLSETFCGSYAYASPEILKGVPYTP--QQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
D+ F G+ + +PEI V Y P ++D+WS+GV+ + ++ G PF E
Sbjct: 169 DFGNEFKNIF-GTPEFVAPEI---VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNILSPV-----KFRIQMEDIRQDPWLKEDSNPVG 178
L V V + S+ AL + + + K R+ ++D Q PW+K
Sbjct: 225 TLANVSA-VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQA 283
Query: 179 KSKSAPEVGIH 189
S+ A V +
Sbjct: 284 LSRKASAVNME 294
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 35/65 (53%)
Query: 238 LPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCY 297
+ RE+ ++K ++HPN+I + E V +I+E G L + + ++ + E++A
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 298 SEVSN 302
++ N
Sbjct: 121 KQILN 125
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 37/196 (18%)
Query: 13 RRWFSQL---------ADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKY 60
RR F++L A A+D+ H K + HRD+K EN+L + +K+ DF
Sbjct: 105 RRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGI 164
Query: 61 SVNNTDYKQNLSE--TFCGSYAYASPEILKGVPYTP----QQSDIWSMGVVLFAMVYGRL 114
+N + E T CGS Y +PE+++ ++ D+WS+GV+L+ ++ G
Sbjct: 165 KLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYP 224
Query: 115 PF-----DDTNYSE----------LLKQVQK-RVVFPESPRLSSSCKA--LISNIL-SPV 155
PF D + L + +Q+ + FP+ SC A LIS +L
Sbjct: 225 PFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDA 284
Query: 156 KFRIQMEDIRQDPWLK 171
K R+ + Q PW++
Sbjct: 285 KQRLSAAQVLQHPWVQ 300
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 56/102 (54%), Gaps = 4/102 (3%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVV-KGLKHPNLIRFLQAI 260
++A V+ + SQ+ A+KII K +++ + RE+E++ + H N++ ++
Sbjct: 24 GAHARVQTCINLITSQEYAVKIIEKQPG---HIRSRVFREVEMLYQCQGHRNVLELIEFF 80
Query: 261 ETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSN 302
E R Y++ E + GS+L I K R+ +E +A + +V++
Sbjct: 81 EEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVAS 122
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 88/191 (46%), Gaps = 21/191 (10%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDD----KYNIKLSDFGFARKYSVNNT 65
++A + Q+ + + Y H + H D+K EN++L D K IK+ DFG A K N
Sbjct: 114 EEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN- 172
Query: 66 DYKQNLSETFCGSYAYASPEILKGVPYTP--QQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++K G+ + +PEI V Y P ++D+WS+GV+ + ++ G PF E
Sbjct: 173 EFK-----NIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNILSPV-----KFRIQMEDIRQDPWLKEDSNPVG 178
L V V + S+ AL + + + K R+ ++D Q PW+K
Sbjct: 225 TLANVSA-VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQA 283
Query: 179 KSKSAPEVGIH 189
S+ A V +
Sbjct: 284 LSRKASAVNME 294
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 35/65 (53%)
Query: 238 LPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCY 297
+ RE+ ++K ++HPN+I + E V +I+E G L + + ++ + E++A
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 298 SEVSN 302
++ N
Sbjct: 121 KQILN 125
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 88/191 (46%), Gaps = 21/191 (10%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDD----KYNIKLSDFGFARKYSVNNT 65
++A + Q+ + + Y H + H D+K EN++L D K IK+ DFG A K N
Sbjct: 114 EEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN- 172
Query: 66 DYKQNLSETFCGSYAYASPEILKGVPYTP--QQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++K G+ + +PEI V Y P ++D+WS+GV+ + ++ G PF E
Sbjct: 173 EFK-----NIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNILSPV-----KFRIQMEDIRQDPWLKEDSNPVG 178
L V V + S+ AL + + + K R+ ++D Q PW+K
Sbjct: 225 TLANVSA-VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQA 283
Query: 179 KSKSAPEVGIH 189
S+ A V +
Sbjct: 284 LSRKASAVNME 294
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 35/65 (53%)
Query: 238 LPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCY 297
+ RE+ ++K ++HPN+I + E V +I+E G L + + ++ + E++A
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 298 SEVSN 302
++ N
Sbjct: 121 KQILN 125
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
QL + +CH+ ++HRD+K +NLL++ +KL+DFG AR + + Y + +
Sbjct: 127 QLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLW-- 184
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
Y +P++L G DIWS+G + M+ G+ F + L ++
Sbjct: 185 ---YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKI 232
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 205 ATVKLATSARHSQD--VAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIET 262
T + A+ SQ VA+K I ++ A + + REI ++K L HPN++ + I +
Sbjct: 32 GTYGVVYKAKDSQGRIVALKRI-RLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHS 90
Query: 263 THRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEV 300
+ ++ E+ + ++ +DE+K L S++
Sbjct: 91 ERCLTLVFEFMEKDL-------KKVLDENKTGLQDSQI 121
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 74/139 (53%), Gaps = 10/139 (7%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+++ ++ H++ +V+RD+K EN+LLDD +I++SD G A T +
Sbjct: 293 AEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR------V 346
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRV-VFP 135
G+ Y +PE++K YT D W++G +L+ M+ G+ PF ++V++ V P
Sbjct: 347 GTVGYMAPEVVKNERYT-FSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP 405
Query: 136 E--SPRLSSSCKALISNIL 152
E S R S ++L S +L
Sbjct: 406 EEYSERFSPQARSLCSQLL 424
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 74/139 (53%), Gaps = 10/139 (7%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+++ ++ H++ +V+RD+K EN+LLDD +I++SD G A T +
Sbjct: 293 AEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR------V 346
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRV-VFP 135
G+ Y +PE++K YT D W++G +L+ M+ G+ PF ++V++ V P
Sbjct: 347 GTVGYMAPEVVKNERYT-FSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP 405
Query: 136 E--SPRLSSSCKALISNIL 152
E S R S ++L S +L
Sbjct: 406 EEYSERFSPQARSLCSQLL 424
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 89/202 (44%), Gaps = 37/202 (18%)
Query: 6 DYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNT 65
D + + + + QL + +CH ++V+HRD+K +NLL++ +KL+DFG AR + +
Sbjct: 97 DLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVR 156
Query: 66 DYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSEL 124
Y + + Y P++L G D+WS G + + P F + +
Sbjct: 157 CYSAEVVTLW-----YRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQ 211
Query: 125 LKQVQKRVVFPES----------------------------PRLSSSCKALISNIL--SP 154
LK++ + + P P+L+++ + L+ N+L +P
Sbjct: 212 LKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNP 271
Query: 155 VKFRIQMEDIRQDPWLKEDSNP 176
V+ RI E+ Q P+ + P
Sbjct: 272 VQ-RISAEEALQHPYFSDFCPP 292
Score = 27.7 bits (60), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLP----REIEVVKGLKHPNLIRFL 257
+Y TV A + + VA+K + +D + +P REI ++K LKH N++R
Sbjct: 13 GTYGTVFKAKNRETHEIVALKRVR-----LDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 258 QAIETTHRVYIIMEY 272
+ + ++ ++ E+
Sbjct: 68 DVLHSDKKLTLVFEF 82
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
QL + +CH+ ++HRD+K +NLL++ +KL+DFG AR + + Y + +
Sbjct: 127 QLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLW-- 184
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
Y +P++L G DIWS+G + M+ G+ F + L ++
Sbjct: 185 ---YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKI 232
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 205 ATVKLATSARHSQD--VAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIET 262
T + A+ SQ VA+K I ++ A + + REI ++K L HPN++ + I +
Sbjct: 32 GTYGVVYKAKDSQGRIVALKRI-RLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHS 90
Query: 263 THRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEV 300
+ ++ E+ + ++ +DE+K L S++
Sbjct: 91 ERCLTLVFEFMEKDL-------KKVLDENKTGLQDSQI 121
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 88/191 (46%), Gaps = 21/191 (10%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDD----KYNIKLSDFGFARKYSVNNT 65
++A + Q+ + + Y H + H D+K EN++L D K IK+ DFG A K N
Sbjct: 114 EEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN- 172
Query: 66 DYKQNLSETFCGSYAYASPEILKGVPYTP--QQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++K G+ + +PEI V Y P ++D+WS+GV+ + ++ G PF E
Sbjct: 173 EFK-----NIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNILSPV-----KFRIQMEDIRQDPWLKEDSNPVG 178
L V V + S+ AL + + + K R+ ++D Q PW+K
Sbjct: 225 TLANVSA-VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQA 283
Query: 179 KSKSAPEVGIH 189
S+ A V +
Sbjct: 284 LSRKASAVNME 294
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 35/65 (53%)
Query: 238 LPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCY 297
+ RE+ ++K ++HPN+I + E V +I+E G L + + ++ + E++A
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 298 SEVSN 302
++ N
Sbjct: 121 KQILN 125
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 19/171 (11%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKY----NIKLSDFGFARKYSVNNT 65
++A + Q+ D ++Y H K + H D+K EN++L DK +IKL DFG A + +
Sbjct: 115 EEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGV 173
Query: 66 DYKQNLSETFCGSYAYASPEILKGVPYTP--QQSDIWSMGVVLFAMVYGRLPF-DDTNYS 122
++K G+ + +PEI V Y P ++D+WS+GV+ + ++ G PF DT
Sbjct: 174 EFK-----NIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
Query: 123 ELLKQVQKRVVFPES--PRLSSSCKALISNIL-SPVKFRIQMEDIRQDPWL 170
L F E S K I +L + R+ +++ + PW+
Sbjct: 226 TLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYL---KKFLPREIEVVKGLKHPNLIRFLQ 258
+A VK + A K I K Q+ ++ + RE+ +++ + H N+I
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHD 82
Query: 259 AIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
E V +I+E G L + + ++ + E++A
Sbjct: 83 VYENRTDVVLILELVSGGELFDFLAQKESLSEEEA 117
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 19/171 (11%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKY----NIKLSDFGFARKYSVNNT 65
++A + Q+ D ++Y H K + H D+K EN++L DK +IKL DFG A + +
Sbjct: 115 EEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGV 173
Query: 66 DYKQNLSETFCGSYAYASPEILKGVPYTP--QQSDIWSMGVVLFAMVYGRLPF-DDTNYS 122
++K G+ + +PEI V Y P ++D+WS+GV+ + ++ G PF DT
Sbjct: 174 EFK-----NIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
Query: 123 ELLKQVQKRVVFPES--PRLSSSCKALISNIL-SPVKFRIQMEDIRQDPWL 170
L F E + S K I +L + R+ +++ + PW+
Sbjct: 226 TLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYL---KKFLPREIEVVKGLKHPNLIRFLQ 258
+A VK + A K I K Q+ ++ + RE+ +++ + H N+I
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHD 82
Query: 259 AIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
E V +I+E G L + + ++ + E++A
Sbjct: 83 VYENRTDVVLILELVSGGELFDFLAQKESLSEEEA 117
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 21/173 (12%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDD----KYNIKLSDFGFARKYSVNNT 65
++A + Q+ + + Y H + H D+K EN++L D K IK+ DFG A K N
Sbjct: 114 EEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN- 172
Query: 66 DYKQNLSETFCGSYAYASPEILKGVPYTP--QQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++K G+ + +PEI V Y P ++D+WS+GV+ + ++ G PF E
Sbjct: 173 EFK-----NIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNILSPV-----KFRIQMEDIRQDPWLK 171
L V V + S+ AL + + + K R+ ++D Q PW+K
Sbjct: 225 TLANVSA-VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 35/65 (53%)
Query: 238 LPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCY 297
+ RE+ ++K ++HPN+I + E V +I+E G L + + ++ + E++A
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 298 SEVSN 302
++ N
Sbjct: 121 KQILN 125
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 19/171 (11%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKY----NIKLSDFGFARKYSVNNT 65
++A + Q+ D ++Y H K + H D+K EN++L DK +IKL DFG A + +
Sbjct: 115 EEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGV 173
Query: 66 DYKQNLSETFCGSYAYASPEILKGVPYTP--QQSDIWSMGVVLFAMVYGRLPF-DDTNYS 122
++K G+ + +PEI V Y P ++D+WS+GV+ + ++ G PF DT
Sbjct: 174 EFK-----NIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
Query: 123 ELLKQVQKRVVFPES--PRLSSSCKALISNIL-SPVKFRIQMEDIRQDPWL 170
L F E S K I +L + R+ +++ + PW+
Sbjct: 226 TLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYL---KKFLPREIEVVKGLKHPNLIRFLQ 258
+A VK + A K I K Q+ ++ + RE+ +++ + H N+I
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHD 82
Query: 259 AIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
E V +I+E G L + + ++ + E++A
Sbjct: 83 VYENRTDVVLILELVSGGELFDFLAQKESLSEEEA 117
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Query: 5 LDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNN 64
++++ +K + Q+ + Y H VVHRD+K NL +++ +K+ DFG AR
Sbjct: 139 MEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEM 198
Query: 65 TDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSEL 124
T Y + Y +PE++ + Q DIWS+G ++ M+ G+ F +Y +
Sbjct: 199 TGY--------VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ 250
Query: 125 LKQVQKRVVFPES 137
L Q+ K P +
Sbjct: 251 LTQILKVTGVPGT 263
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 75/135 (55%), Gaps = 9/135 (6%)
Query: 19 LADAIDYCHKKS--VVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+A ++Y H ++ +VHRD+K NLL+D KY +K+ DFG +R + S+
Sbjct: 146 VAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFL-----XSKXAA 200
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPE 136
G+ + +PE+L+ P ++SD++S GV+L+ + + P+ + N ++++ V + E
Sbjct: 201 GTPEWMAPEVLRDEPSN-EKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLE 259
Query: 137 SPR-LSSSCKALISN 150
PR L+ A+I
Sbjct: 260 IPRNLNPQVAAIIEG 274
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ TV A H DVA+KI+ + + + +FL RE+ ++K L+HPN++ F+ A+
Sbjct: 48 GSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFL-REVAIMKRLRHPNIVLFMGAVT 104
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
+ I+ EY GSL ++ K
Sbjct: 105 QPPNLSIVTEYLSRGSLYRLLHK 127
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 12/142 (8%)
Query: 22 AIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGSYAY 81
A+ Y H + V+HRDIK +++LL +KLSDFGF + S + K G+ +
Sbjct: 153 ALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRK-----XLVGTPYW 207
Query: 82 ASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPESPRLS 141
+PE++ Y + DIWS+G+++ MV G P+ +S+ Q KR+ P+L
Sbjct: 208 MAPEVISRSLYA-TEVDIWSLGIMVIEMVDGEPPY----FSDSPVQAMKRLRDSPPPKLK 262
Query: 142 SSCKALISNILSPVKFRIQMED 163
+S K +S +L R+ + D
Sbjct: 263 NSHK--VSPVLRDFLERMLVRD 282
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/103 (19%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S V LA + VA+K++ + ++ L E+ +++ +H N++ ++
Sbjct: 56 GSTGIVCLAREKHSGRQVAVKMMDLRK---QQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNLS 304
++++ME+ + G+L +++ + R +E A +C + + L+
Sbjct: 113 VGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALA 155
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 85/171 (49%), Gaps = 29/171 (16%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ +A+++ H K ++HRD+K N+L+ + +I+L+DFG + K N Q ++F G
Sbjct: 117 QMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAK----NLKTLQK-RDSFIG 171
Query: 78 SYAYASPEI-----LKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRV 132
+ + +PE+ +K PY ++DIWS+G+ L M P + N +L ++ K
Sbjct: 172 TPYWMAPEVVMCETMKDTPYD-YKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS- 229
Query: 133 VFPESPRLSSSCKALISNILSPVKFRIQMEDIRQDPWLKEDSNPVGKSKSA 183
+ P L L+P K+ ++ D + + D NP + +A
Sbjct: 230 ---DPPTL-----------LTPSKWSVEFRDFLK---IALDKNPETRPSAA 263
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 21/173 (12%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDD----KYNIKLSDFGFARKYSVNNT 65
++A + Q+ + + Y H + H D+K EN++L D K IK+ DFG A K N
Sbjct: 114 EEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN- 172
Query: 66 DYKQNLSETFCGSYAYASPEILKGVPYTP--QQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++K G+ + +PEI V Y P ++D+WS+GV+ + ++ G PF E
Sbjct: 173 EFK-----NIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNILSPV-----KFRIQMEDIRQDPWLK 171
L V V + S+ AL + + + K R+ ++D Q PW+K
Sbjct: 225 TLANVSA-VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 35/65 (53%)
Query: 238 LPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCY 297
+ RE+ ++K ++HPN+I + E V +I+E G L + + ++ + E++A
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 298 SEVSN 302
++ N
Sbjct: 121 KQILN 125
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 19/171 (11%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKY----NIKLSDFGFARKYSVNNT 65
++A + Q+ D ++Y H K + H D+K EN++L DK +IKL DFG A + +
Sbjct: 115 EEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGV 173
Query: 66 DYKQNLSETFCGSYAYASPEILKGVPYTP--QQSDIWSMGVVLFAMVYGRLPF-DDTNYS 122
++K G+ + +PEI V Y P ++D+WS+GV+ + ++ G PF DT
Sbjct: 174 EFK-----NIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
Query: 123 ELLKQVQKRVVFPES--PRLSSSCKALISNIL-SPVKFRIQMEDIRQDPWL 170
L F E + S K I +L + R+ +++ + PW+
Sbjct: 226 TLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPI---DYLKKFLPREIEVVKGLKHPNLIRFLQ 258
+A VK + A K I K Q+ ++ + RE+ +++ + HPN+I
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHD 82
Query: 259 AIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
E V +I+E G L + + ++ + E++A
Sbjct: 83 VYENRTDVVLILELVSGGELFDFLAQKESLSEEEA 117
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 21/173 (12%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDD----KYNIKLSDFGFARKYSVNNT 65
++A + Q+ + + Y H + H D+K EN++L D K IK+ DFG A K N
Sbjct: 114 EEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN- 172
Query: 66 DYKQNLSETFCGSYAYASPEILKGVPYTP--QQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++K G+ + +PEI V Y P ++D+WS+GV+ + ++ G PF E
Sbjct: 173 EFK-----NIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNILSPV-----KFRIQMEDIRQDPWLK 171
L V V + S+ AL + + + K R+ ++D Q PW+K
Sbjct: 225 TLANVSA-VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 35/65 (53%)
Query: 238 LPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCY 297
+ RE+ ++K ++HPN+I + E V +I+E G L + + ++ + E++A
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 298 SEVSN 302
++ N
Sbjct: 121 KQILN 125
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 90/202 (44%), Gaps = 37/202 (18%)
Query: 6 DYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNT 65
D + + + + QL + +CH ++V+HRD+K +NLL++ +KL++FG AR + +
Sbjct: 97 DLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR 156
Query: 66 DYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSEL 124
Y + + Y P++L G D+WS G + + GR F + +
Sbjct: 157 CYSAEVVTLW-----YRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ 211
Query: 125 LKQVQKRVVFPES----------------------------PRLSSSCKALISNIL--SP 154
LK++ + + P P+L+++ + L+ N+L +P
Sbjct: 212 LKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNP 271
Query: 155 VKFRIQMEDIRQDPWLKEDSNP 176
V+ RI E+ Q P+ + P
Sbjct: 272 VQ-RISAEEALQHPYFSDFCPP 292
Score = 28.1 bits (61), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLP----REIEVVKGLKHPNLIRFL 257
+Y TV A + + VA+K + +D + +P REI ++K LKH N++R
Sbjct: 13 GTYGTVFKAKNRETHEIVALKRVR-----LDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 258 QAIETTHRVYIIMEY 272
+ + ++ ++ E+
Sbjct: 68 DVLHSDKKLTLVFEF 82
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 5 LDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNN 64
L ++ +K + Q+ + Y H VVHRD+K NL +++ +K+ DFG AR
Sbjct: 121 LKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEM 180
Query: 65 TDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSEL 124
T Y + Y +PE++ + Q DIWS+G ++ M+ G+ F +Y +
Sbjct: 181 TGY--------VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ 232
Query: 125 LKQVQKRVVFP 135
L Q+ K P
Sbjct: 233 LTQILKVTGVP 243
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 84/171 (49%), Gaps = 29/171 (16%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ +A+++ H K ++HRD+K N+L+ + +I+L+DFG S N Q ++F G
Sbjct: 125 QMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGV----SAKNLKTLQK-RDSFIG 179
Query: 78 SYAYASPEI-----LKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRV 132
+ + +PE+ +K PY ++DIWS+G+ L M P + N +L ++ K
Sbjct: 180 TPYWMAPEVVMCETMKDTPYD-YKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS- 237
Query: 133 VFPESPRLSSSCKALISNILSPVKFRIQMEDIRQDPWLKEDSNPVGKSKSA 183
+ P L L+P K+ ++ D + + D NP + +A
Sbjct: 238 ---DPPTL-----------LTPSKWSVEFRDFLK---IALDKNPETRPSAA 271
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 21/173 (12%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDD----KYNIKLSDFGFARKYSVNNT 65
++A + Q+ + + Y H + H D+K EN++L D K IK+ DFG A K N
Sbjct: 114 EEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN- 172
Query: 66 DYKQNLSETFCGSYAYASPEILKGVPYTP--QQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++K G+ + +PEI V Y P ++D+WS+GV+ + ++ G PF E
Sbjct: 173 EFK-----NIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNILSPV-----KFRIQMEDIRQDPWLK 171
L V V + S+ AL + + + K R+ ++D Q PW+K
Sbjct: 225 TLANVSA-VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 35/65 (53%)
Query: 238 LPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCY 297
+ RE+ ++K ++HPN+I + E V +I+E G L + + ++ + E++A
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 298 SEVSN 302
++ N
Sbjct: 121 KQILN 125
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 11/142 (7%)
Query: 14 RWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSE 73
R+ Q+A+ + Y K +HRD+ NLLL + +K+ DFG R N D + E
Sbjct: 115 RYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN--DDHXVMQE 172
Query: 74 TFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQKRV 132
+A+ +PE LK ++ SD W GV L+ M YG+ P+ N S++L ++ K
Sbjct: 173 HRKVPFAWCAPESLKTRTFS-HASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK-- 229
Query: 133 VFPESPRL--SSSCKALISNIL 152
E RL C I N++
Sbjct: 230 ---EGERLPRPEDCPQDIYNVM 248
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 11/73 (15%)
Query: 219 VAIK-----IISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYA 273
VA+K ++S+ +A D++ RE+ + L H NLIR L + T + ++ E A
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFI-----REVNAMHSLDHRNLIR-LYGVVLTPPMKMVTELA 92
Query: 274 KNGSLLEVIRKER 286
GSLL+ +RK +
Sbjct: 93 PLGSLLDRLRKHQ 105
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 21/173 (12%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDD----KYNIKLSDFGFARKYSVNNT 65
++A + Q+ + + Y H + H D+K EN++L D K IK+ DFG A K N
Sbjct: 114 EEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN- 172
Query: 66 DYKQNLSETFCGSYAYASPEILKGVPYTP--QQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++K G+ + +PEI V Y P ++D+WS+GV+ + ++ G PF E
Sbjct: 173 EFK-----NIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNILSPV-----KFRIQMEDIRQDPWLK 171
L V V + S+ AL + + + K R+ ++D Q PW+K
Sbjct: 225 TLANVSA-VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 35/65 (53%)
Query: 238 LPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCY 297
+ RE+ ++K ++HPN+I + E V +I+E G L + + ++ + E++A
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 298 SEVSN 302
++ N
Sbjct: 121 KQILN 125
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKY------------SVN-- 63
QL I Y H ++HRD+K N+LL+ + ++K++DFG +R + S+N
Sbjct: 117 QLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINEN 176
Query: 64 --NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNY 121
N D Q + + + Y +PEIL G + D+WS+G +L ++ G+ F ++
Sbjct: 177 TENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST 236
Query: 122 SELLKQVQKRVVFPESPRLSSSCKALISNILSPVKFRIQM 161
L+++ + FP + + S ++ +K ++++
Sbjct: 237 MNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEI 276
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 76/135 (56%), Gaps = 9/135 (6%)
Query: 19 LADAIDYCHKKS--VVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+A ++Y H ++ +VHR++K NLL+D KY +K+ DFG +R + S++
Sbjct: 146 VAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLS-----SKSAA 200
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPE 136
G+ + +PE+L+ P ++SD++S GV+L+ + + P+ + N ++++ V + E
Sbjct: 201 GTPEWMAPEVLRDEPSN-EKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLE 259
Query: 137 SPR-LSSSCKALISN 150
PR L+ A+I
Sbjct: 260 IPRNLNPQVAAIIEG 274
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ TV A H DVA+KI+ + + + +FL RE+ ++K L+HPN++ F+ A+
Sbjct: 48 GSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFL-REVAIMKRLRHPNIVLFMGAVT 104
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK---ERYIDEDKAL 294
+ I+ EY GSL ++ K +DE + L
Sbjct: 105 QPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRL 140
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 21/173 (12%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDD----KYNIKLSDFGFARKYSVNNT 65
++A + Q+ + + Y H + H D+K EN++L D K IK+ DFG A K N
Sbjct: 113 EEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN- 171
Query: 66 DYKQNLSETFCGSYAYASPEILKGVPYTP--QQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++K G+ + +PEI V Y P ++D+WS+GV+ + ++ G PF E
Sbjct: 172 EFK-----NIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 223
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNILSPV-----KFRIQMEDIRQDPWLK 171
L V V + S+ AL + + + K R+ ++D Q PW+K
Sbjct: 224 TLANVSA-VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 35/65 (53%)
Query: 238 LPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCY 297
+ RE+ ++K ++HPN+I + E V +I+E G L + + ++ + E++A
Sbjct: 60 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 119
Query: 298 SEVSN 302
++ N
Sbjct: 120 KQILN 124
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 21/173 (12%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDD----KYNIKLSDFGFARKYSVNNT 65
++A + Q+ + + Y H + H D+K EN++L D K IK+ DFG A K N
Sbjct: 114 EEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN- 172
Query: 66 DYKQNLSETFCGSYAYASPEILKGVPYTP--QQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++K G+ + +PEI V Y P ++D+WS+GV+ + ++ G PF E
Sbjct: 173 EFK-----NIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNILSPV-----KFRIQMEDIRQDPWLK 171
L V V + S+ AL + + + K R+ ++D Q PW+K
Sbjct: 225 TLANVSA-VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 35/65 (53%)
Query: 238 LPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCY 297
+ RE+ ++K ++HPN+I + E V +I+E G L + + ++ + E++A
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 298 SEVSN 302
++ N
Sbjct: 121 KQILN 125
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 21/173 (12%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDD----KYNIKLSDFGFARKYSVNNT 65
++A + Q+ + + Y H + H D+K EN++L D K IK+ DFG A K N
Sbjct: 113 EEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN- 171
Query: 66 DYKQNLSETFCGSYAYASPEILKGVPYTP--QQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++K G+ + +PEI V Y P ++D+WS+GV+ + ++ G PF E
Sbjct: 172 EFK-----NIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 223
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNILSPV-----KFRIQMEDIRQDPWLK 171
L V V + S+ AL + + + K R+ ++D Q PW+K
Sbjct: 224 TLANVSA-VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 35/65 (53%)
Query: 238 LPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCY 297
+ RE+ ++K ++HPN+I + E V +I+E G L + + ++ + E++A
Sbjct: 60 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 119
Query: 298 SEVSN 302
++ N
Sbjct: 120 KQILN 124
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 21/173 (12%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDD----KYNIKLSDFGFARKYSVNNT 65
++A + Q+ + + Y H + H D+K EN++L D K IK+ DFG A K N
Sbjct: 114 EEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN- 172
Query: 66 DYKQNLSETFCGSYAYASPEILKGVPYTP--QQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
++K G+ + +PEI V Y P ++D+WS+GV+ + ++ G PF E
Sbjct: 173 EFK-----NIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
Query: 124 LLKQVQKRVVFPESPRLSSSCKALISNILSPV-----KFRIQMEDIRQDPWLK 171
L V V + S+ AL + + + K R+ ++D Q PW+K
Sbjct: 225 TLANVSA-VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
Score = 35.0 bits (79), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 34/65 (52%)
Query: 238 LPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCY 297
+ RE+ ++K ++HPN+I + E V +I E G L + + ++ + E++A
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 298 SEVSN 302
++ N
Sbjct: 121 KQILN 125
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 11/142 (7%)
Query: 14 RWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSE 73
R+ Q+A+ + Y K +HRD+ NLLL + +K+ DFG R N D + E
Sbjct: 125 RYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN--DDHXVMQE 182
Query: 74 TFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQKRV 132
+A+ +PE LK ++ SD W GV L+ M YG+ P+ N S++L ++ K
Sbjct: 183 HRKVPFAWCAPESLKTRTFS-HASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK-- 239
Query: 133 VFPESPRL--SSSCKALISNIL 152
E RL C I N++
Sbjct: 240 ---EGERLPRPEDCPQDIYNVM 258
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 11/73 (15%)
Query: 219 VAIK-----IISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYA 273
VA+K ++S+ +A D++ RE+ + L H NLIR L + T + ++ E A
Sbjct: 49 VAVKCLKPDVLSQPEAMDDFI-----REVNAMHSLDHRNLIR-LYGVVLTPPMKMVTELA 102
Query: 274 KNGSLLEVIRKER 286
GSLL+ +RK +
Sbjct: 103 PLGSLLDRLRKHQ 115
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
W Q+A+ ++Y + +VHRD+ N+L+ ++K++DFG A+ +Y +
Sbjct: 119 WCVQIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 178
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVV 133
A S IL + YT QSD+WS GV ++ M +G P+D SE+ ++K
Sbjct: 179 PIKWMALES--ILHRI-YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 234
Query: 134 FPESP 138
P+ P
Sbjct: 235 LPQPP 239
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 61/118 (51%), Gaps = 8/118 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
QL + Y H ++HRD+K N+ +++ +++ DFG AR+ T Y
Sbjct: 139 QLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGY--------VA 190
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFP 135
+ Y +PEI+ + Q DIWS+G ++ ++ G+ F ++Y + LK++ + V P
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTP 248
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 202 SSYATVKLATSARHSQDVAIKIISK-VQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQ-- 258
+Y +V A AR Q VA+K +S+ Q+ I + + RE+ ++K LKH N+I L
Sbjct: 39 GAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTY--RELRLLKHLKHENVIGLLDVF 96
Query: 259 ----AIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+IE VY++ L +++ + DE L Y + L
Sbjct: 97 TPATSIEDFSEVYLVTTLM-GADLNNIVKSQALSDEHVQFLVYQLLRGL 144
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
W Q+A ++Y + +VHRD+ N+L+ ++K++DFG A+ +Y +
Sbjct: 156 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 215
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVV 133
A S IL + YT QSD+WS GV ++ M +G P+D SE+ ++K
Sbjct: 216 PIKWMALES--ILHRI-YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 271
Query: 134 FPESP 138
P+ P
Sbjct: 272 LPQPP 276
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 61/118 (51%), Gaps = 8/118 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
QL + Y H ++HRD+K N+ +++ +++ DFG AR+ T Y
Sbjct: 139 QLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGY--------VA 190
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFP 135
+ Y +PEI+ + Q DIWS+G ++ ++ G+ F ++Y + LK++ + V P
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTP 248
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 202 SSYATVKLATSARHSQDVAIKIISK-VQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQ-- 258
+Y +V A AR Q VA+K +S+ Q+ I + + RE+ ++K LKH N+I L
Sbjct: 39 GAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTY--RELRLLKHLKHENVIGLLDVF 96
Query: 259 ----AIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+IE VY++ L +++ + DE L Y + L
Sbjct: 97 TPATSIEDFSEVYLVTTLM-GADLNNIVKCQALSDEHVQFLVYQLLRGL 144
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------VA 184
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 185 TRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 138 PRL 140
L
Sbjct: 245 ELL 247
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 92 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR + T Y
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGY--------VA 191
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 251
Query: 138 PRL 140
L
Sbjct: 252 ELL 254
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 40 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 98
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 99 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 145
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
W Q+A ++Y + +VHRD+ N+L+ ++K++DFG A+ +Y +
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVV 133
A S IL + YT QSD+WS GV ++ M +G P+D SE+ ++K
Sbjct: 189 PIKWMALES--ILHRI-YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 244
Query: 134 FPESP 138
P+ P
Sbjct: 245 LPQPP 249
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR + T Y
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGY--------VA 191
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 251
Query: 138 PRL 140
L
Sbjct: 252 ELL 254
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 40 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 98
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 99 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 145
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
W Q+A ++Y + +VHRD+ N+L+ ++K++DFG A+ +Y +
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVV 133
A S IL + YT QSD+WS GV ++ M +G P+D SE+ ++K
Sbjct: 182 PIKWMALES--ILHRI-YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 237
Query: 134 FPESP 138
P+ P
Sbjct: 238 LPQPP 242
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
W Q+A ++Y + +VHRD+ N+L+ ++K++DFG A+ +Y +
Sbjct: 126 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 185
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVV 133
A S IL + YT QSD+WS GV ++ M +G P+D SE+ ++K
Sbjct: 186 PIKWMALES--ILHRI-YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 241
Query: 134 FPESP 138
P+ P
Sbjct: 242 LPQPP 246
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
W Q+A ++Y + +VHRD+ N+L+ ++K++DFG A+ +Y +
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVV 133
A S IL + YT QSD+WS GV ++ M +G P+D SE+ ++K
Sbjct: 189 PIKWMALES--ILHRI-YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 244
Query: 134 FPESP 138
P+ P
Sbjct: 245 LPQPP 249
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 90/180 (50%), Gaps = 23/180 (12%)
Query: 6 DYNTDKAR--RWFSQLADAIDYCHKKSVVHRDIKCENLLLDDK--YNIKLSDFGFARKYS 61
DY +A + Q + + + H+ S+VH DIK EN++ + K ++K+ DFG A K
Sbjct: 143 DYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKL- 201
Query: 62 VNNTDYKQNLSETFCGSYAYASPEILKGVP---YTPQQSDIWSMGVVLFAMVYGRLPFDD 118
N D + + + +A+PEI+ P YT D+W++GV+ + ++ G PF
Sbjct: 202 --NPD---EIVKVTTATAEFAAPEIVDREPVGFYT----DMWAIGVLGYVLLSGLSPFAG 252
Query: 119 TNYSELLKQVQK-RVVFPESP--RLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKED 173
+ E L+ V++ F E +S K I N+L P K R+ + D + PWLK D
Sbjct: 253 EDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRK-RLTVHDALEHPWLKGD 311
Score = 35.0 bits (79), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 230 PIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERY 287
P+D K + EI ++ L HP LI A E + + +I+E+ G L + I E Y
Sbjct: 89 PLD--KYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDY 144
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR + T Y
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGY--------VA 191
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 251
Query: 138 PRL 140
L
Sbjct: 252 ELL 254
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 40 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 98
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 99 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 145
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY--------VA 189
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 249
Query: 138 PRL 140
L
Sbjct: 250 ELL 252
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 38 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 96
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 97 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 143
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
W Q+A ++Y + +VHRD+ N+L+ ++K++DFG A+ +Y +
Sbjct: 132 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 191
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVV 133
A S IL + YT QSD+WS GV ++ M +G P+D SE+ ++K
Sbjct: 192 PIKWMALES--ILHRI-YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 247
Query: 134 FPESP 138
P+ P
Sbjct: 248 LPQPP 252
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
W Q+A ++Y + +VHRD+ N+L+ ++K++DFG A+ +Y +
Sbjct: 128 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 187
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVV 133
A S IL + YT QSD+WS GV ++ M +G P+D SE+ ++K
Sbjct: 188 PIKWMALES--ILHRI-YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 243
Query: 134 FPESP 138
P+ P
Sbjct: 244 LPQPP 248
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
W Q+A ++Y + +VHRD+ N+L+ ++K++DFG A+ +Y +
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVV 133
A S IL + YT QSD+WS GV ++ M +G P+D SE+ ++K
Sbjct: 189 PIKWMALES--ILHRI-YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 244
Query: 134 FPESP 138
P+ P
Sbjct: 245 LPQPP 249
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
W Q+A ++Y + +VHRD+ N+L+ ++K++DFG A+ +Y +
Sbjct: 123 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 182
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVV 133
A S IL + YT QSD+WS GV ++ M +G P+D SE+ ++K
Sbjct: 183 PIKWMALES--ILHRI-YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 238
Query: 134 FPESP 138
P+ P
Sbjct: 239 LPQPP 243
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
W Q+A ++Y + +VHRD+ N+L+ ++K++DFG A+ +Y +
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 183
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVV 133
A S IL + YT QSD+WS GV ++ M +G P+D SE+ ++K
Sbjct: 184 PIKWMALES--ILHRI-YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 239
Query: 134 FPESP 138
P+ P
Sbjct: 240 LPQPP 244
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY--------VA 189
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 249
Query: 138 PRL 140
L
Sbjct: 250 ELL 252
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 38 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 96
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 97 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 143
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY--------VA 184
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 138 PRL 140
L
Sbjct: 245 ELL 247
Score = 31.2 bits (69), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 92 PARSLEEFNDVYLVT-HLMGADLNNIVKXQKLTDDHVQFLIYQILRGL 138
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
W Q+A ++Y + +VHRD+ N+L+ ++K++DFG A+ +Y +
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVV 133
A S IL + YT QSD+WS GV ++ M +G P+D SE+ ++K
Sbjct: 182 PIKWMALES--ILHRI-YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 237
Query: 134 FPESP 138
P+ P
Sbjct: 238 LPQPP 242
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
W Q+A ++Y + +VHRD+ N+L+ ++K++DFG A+ +Y +
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVV 133
A S IL + YT QSD+WS GV ++ M +G P+D SE+ ++K
Sbjct: 185 PIKWMALES--ILHRI-YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 240
Query: 134 FPESP 138
P+ P
Sbjct: 241 LPQPP 245
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
W Q+A ++Y + +VHRD+ N+L+ ++K++DFG A+ +Y +
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVV 133
A S IL + YT QSD+WS GV ++ M +G P+D SE+ ++K
Sbjct: 182 PIKWMALES--ILHRI-YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 237
Query: 134 FPESP 138
P+ P
Sbjct: 238 LPQPP 242
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
W Q+A ++Y + +VHRD+ N+L+ ++K++DFG A+ +Y +
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVV 133
A S IL + YT QSD+WS GV ++ M +G P+D SE+ ++K
Sbjct: 185 PIKWMALES--ILHRI-YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 240
Query: 134 FPESP 138
P+ P
Sbjct: 241 LPQPP 245
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
W Q+A ++Y + +VHRD+ N+L+ ++K++DFG A+ +Y +
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 183
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVV 133
A S IL + YT QSD+WS GV ++ M +G P+D SE+ ++K
Sbjct: 184 PIKWMALES--ILHRI-YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 239
Query: 134 FPESP 138
P+ P
Sbjct: 240 LPQPP 244
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
W Q+A ++Y + +VHRD+ N+L+ ++K++DFG A+ +Y +
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVV 133
A S IL + YT QSD+WS GV ++ M +G P+D SE+ ++K
Sbjct: 185 PIKWMALES--ILHRI-YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 240
Query: 134 FPESP 138
P+ P
Sbjct: 241 LPQPP 245
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 144 QILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY--------VA 195
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 196 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 255
Query: 138 PRL 140
L
Sbjct: 256 ELL 258
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 44 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 102
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 103 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 149
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
W Q+A ++Y + +VHRD+ N+L+ ++K++DFG A+ +Y +
Sbjct: 123 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 182
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVV 133
A S IL + YT QSD+WS GV ++ M +G P+D SE+ ++K
Sbjct: 183 PIKWMALES--ILHRI-YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 238
Query: 134 FPESP 138
P+ P
Sbjct: 239 LPQPP 243
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
W Q+A ++Y + +VHRD+ N+L+ ++K++DFG A+ +Y +
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVV 133
A S IL + YT QSD+WS GV ++ M +G P+D SE+ ++K
Sbjct: 182 PIKWMALES--ILHRI-YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 237
Query: 134 FPESP 138
P+ P
Sbjct: 238 LPQPP 242
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
W Q+A ++Y + +VHRD+ N+L+ ++K++DFG A+ +Y +
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVV 133
A S IL + YT QSD+WS GV ++ M +G P+D SE+ ++K
Sbjct: 182 PIKWMALES--ILHRI-YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 237
Query: 134 FPESP 138
P+ P
Sbjct: 238 LPQPP 242
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
W Q+A ++Y + +VHRD+ N+L+ ++K++DFG A+ +Y +
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVV 133
A S IL + YT QSD+WS GV ++ M +G P+D SE+ ++K
Sbjct: 185 PIKWMALES--ILHRI-YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 240
Query: 134 FPESP 138
P+ P
Sbjct: 241 LPQPP 245
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 61/118 (51%), Gaps = 8/118 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
QL + Y H ++HRD+K N+ +++ +++ DFG AR+ T Y
Sbjct: 131 QLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGY--------VA 182
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFP 135
+ Y +PEI+ + Q DIWS+G ++ ++ G+ F ++Y + LK++ + V P
Sbjct: 183 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTP 240
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 202 SSYATVKLATSARHSQDVAIKIISK-VQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQ-- 258
+Y +V A AR Q VA+K +S+ Q+ I + + RE+ ++K LKH N+I L
Sbjct: 31 GAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTY--RELRLLKHLKHENVIGLLDVF 88
Query: 259 ----AIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+IE VY++ L +++ + DE L Y + L
Sbjct: 89 TPATSIEDFSEVYLVTTLM-GADLNNIVKCQALSDEHVQFLVYQLLRGL 136
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 60/109 (55%), Gaps = 14/109 (12%)
Query: 19 LADAIDYCHKKSVVHRDIKCENLL-LDDKYN---IKLSDFGFARKYSVNNTDYKQNLSET 74
+ ++Y H + VVHRD+K N+L +D+ N I++ DFGFA++ N L T
Sbjct: 125 ITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN-----GLLXT 179
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF----DDT 119
C + + +PE+L+ Y DIWS+GV+L+ + G PF DDT
Sbjct: 180 PCYTANFVAPEVLERQGYD-AACDIWSLGVLLYTXLTGYTPFANGPDDT 227
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVV-KGLKHPNLIRFLQAI 260
SY+ K + + A+KII K K+ EIE++ + +HPN+I
Sbjct: 33 GSYSVCKRCIHKATNXEFAVKIIDKS-------KRDPTEEIEILLRYGQHPNIITLKDVY 85
Query: 261 ETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
+ VY++ E K G LL+ I ++++ E +A
Sbjct: 86 DDGKYVYVVTELXKGGELLDKILRQKFFSEREA 118
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 139 QILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGY--------VA 190
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 250
Query: 138 PRL 140
L
Sbjct: 251 ELL 253
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 39 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 97
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 98 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 144
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGY--------VA 186
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 246
Query: 138 PRL 140
L
Sbjct: 247 ELL 249
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 35 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 93
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 94 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 140
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 74/141 (52%), Gaps = 10/141 (7%)
Query: 22 AIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS-----ETFC 76
++ H K HRD+K N+LL D+ L D G + ++ +Q L+ C
Sbjct: 146 GLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRC 205
Query: 77 GSYAYASPEILKGVPYT--PQQSDIWSMGVVLFAMVYGRLPFDDT--NYSELLKQVQKRV 132
+ +Y +PE+ + +++D+WS+G VL+AM++G P+D + VQ ++
Sbjct: 206 -TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQL 264
Query: 133 VFPESPRLSSSCKALISNILS 153
P+SPR SS+ L++++++
Sbjct: 265 SIPQSPRHSSALWQLLNSMMT 285
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
W Q+A ++Y + +VHRD+ N+L+ ++K++DFG A+ +Y +
Sbjct: 116 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 175
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVV 133
A S IL + YT QSD+WS GV ++ M +G P+D SE+ ++K
Sbjct: 176 PIKWMALES--ILHRI-YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 231
Query: 134 FPESP 138
P+ P
Sbjct: 232 LPQPP 236
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
W Q+A ++Y + +VHRD+ N+L+ ++K++DFG A+ +Y +
Sbjct: 147 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 206
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVV 133
A S IL + YT QSD+WS GV ++ M +G P+D SE+ ++K
Sbjct: 207 PIKWMALES--ILHRI-YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 262
Query: 134 FPESP 138
P+ P
Sbjct: 263 LPQPP 267
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR +TD + F
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM---AGFVA 184
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 138 PRL 140
L
Sbjct: 245 ELL 247
Score = 31.6 bits (70), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 33 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 92 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR +TD + F
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM---AGFVA 184
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 138 PRL 140
L
Sbjct: 245 ELL 247
Score = 31.6 bits (70), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 33 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 92 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------VA 184
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 138 PRL 140
L
Sbjct: 245 ELL 247
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 92 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------VA 184
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 138 PRL 140
L
Sbjct: 245 ELL 247
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 92 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 156 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------VA 207
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 208 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 267
Query: 138 PRL 140
L
Sbjct: 268 ELL 270
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 56 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 114
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 115 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 161
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR +TD + F
Sbjct: 129 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM---AGFVA 180
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 240
Query: 138 PRL 140
L
Sbjct: 241 ELL 243
Score = 31.6 bits (70), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 29 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 87
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 88 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 134
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------VA 184
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 138 PRL 140
L
Sbjct: 245 ELL 247
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 92 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 139 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------VA 190
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 250
Query: 138 PRL 140
L
Sbjct: 251 ELL 253
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 39 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 97
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 98 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 144
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------VA 184
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 138 PRL 140
L
Sbjct: 245 ELL 247
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 33 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 92 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 139 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------VA 190
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 250
Query: 138 PRL 140
L
Sbjct: 251 ELL 253
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 39 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 97
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 98 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 144
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------VA 189
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 249
Query: 138 PRL 140
L
Sbjct: 250 ELL 252
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 38 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 96
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 97 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 143
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 153 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------VA 204
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 264
Query: 138 PRL 140
L
Sbjct: 265 ELL 267
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 53 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 111
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 112 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 158
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------VA 191
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 251
Query: 138 PRL 140
L
Sbjct: 252 ELL 254
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 40 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 98
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 99 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 145
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 130 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------VA 181
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 182 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 241
Query: 138 PRL 140
L
Sbjct: 242 ELL 244
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 30 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 88
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 89 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 135
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 143 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------VA 194
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 195 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 254
Query: 138 PRL 140
L
Sbjct: 255 ELL 257
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 43 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 101
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 102 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 148
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------VA 184
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 138 PRL 140
L
Sbjct: 245 ELL 247
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 92 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------VA 186
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 246
Query: 138 PRL 140
L
Sbjct: 247 ELL 249
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 35 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 93
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 94 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 140
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------VA 184
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 138 PRL 140
L
Sbjct: 245 ELL 247
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 92 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 129 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------VA 180
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 240
Query: 138 PRL 140
L
Sbjct: 241 ELL 243
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 29 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 87
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 88 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 134
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------VA 184
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 138 PRL 140
L
Sbjct: 245 ELL 247
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 92 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 145 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------VA 196
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 256
Query: 138 PRL 140
L
Sbjct: 257 ELL 259
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 45 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 103
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 104 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 150
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 145 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------VA 196
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 256
Query: 138 PRL 140
L
Sbjct: 257 ELL 259
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +SK I + K+ RE+ ++K +KH N+I L
Sbjct: 45 GAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 103
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 104 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 150
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 145 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------VA 196
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 256
Query: 138 PRL 140
L
Sbjct: 257 ELL 259
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 45 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 103
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 104 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 150
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------VA 189
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 249
Query: 138 PRL 140
L
Sbjct: 250 ELL 252
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 38 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 96
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 97 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 143
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 130 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------VA 181
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 182 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 241
Query: 138 PRL 140
L
Sbjct: 242 ELL 244
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 30 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 88
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 89 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 135
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 132 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------VA 183
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 184 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 243
Query: 138 PRL 140
L
Sbjct: 244 ELL 246
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 32 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 90
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 91 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 137
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------VA 184
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 138 PRL 140
L
Sbjct: 245 ELL 247
Score = 31.2 bits (69), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 92 PARSLEEFNDVYLVT-HLMGADLNNIVKXQKLTDDHVQFLIYQILRGL 138
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 139 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------VA 190
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 250
Query: 138 PRL 140
L
Sbjct: 251 ELL 253
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 39 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 97
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 98 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 144
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 129 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------VA 180
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 240
Query: 138 PRL 140
L
Sbjct: 241 ELL 243
Score = 31.6 bits (70), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 29 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 87
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 88 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 134
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------VA 186
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 246
Query: 138 PRL 140
L
Sbjct: 247 ELL 249
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 35 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 93
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 94 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 140
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 144 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------VA 195
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 196 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 255
Query: 138 PRL 140
L
Sbjct: 256 ELL 258
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 44 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 102
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 103 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 149
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 131 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------VA 182
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 183 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 242
Query: 138 PRL 140
L
Sbjct: 243 ELL 245
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 31 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 89
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 90 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 136
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------VA 184
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 138 PRL 140
L
Sbjct: 245 ELL 247
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 92 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 129 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------VA 180
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 240
Query: 138 PRL 140
L
Sbjct: 241 ELL 243
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 51/108 (47%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 29 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 87
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ + D+ L Y + L
Sbjct: 88 PARSLEEFNDVYLVT-HLMGADLNNIVKCAKLTDDHVQFLIYQILRGL 134
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 152 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------VA 203
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 204 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 263
Query: 138 PRL 140
L
Sbjct: 264 ELL 266
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 52 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 110
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 111 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 157
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 153 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------VA 204
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 264
Query: 138 PRL 140
L
Sbjct: 265 ELL 267
Score = 31.6 bits (70), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 53 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 111
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 112 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 158
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------VA 186
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 246
Query: 138 PRL 140
L
Sbjct: 247 ELL 249
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 35 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 93
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 94 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 140
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 152 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------VA 203
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 204 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 263
Query: 138 PRL 140
L
Sbjct: 264 ELL 266
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 52 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 110
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 111 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 157
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 9/147 (6%)
Query: 13 RRWFSQLADA---IDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQ 69
+R +ADA +++ H+ ++HRD+K N+L+ +K+ DFG AR + + Q
Sbjct: 116 KRAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQ 175
Query: 70 NLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQ 129
+ G+ Y SPE +G +SD++S+G VL+ ++ G PF + + Q
Sbjct: 176 --TAAVIGTAQYLSPEQARG-DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV 232
Query: 130 KRVVFPESPR---LSSSCKALISNILS 153
+ P S R LS+ A++ L+
Sbjct: 233 REDPIPPSARHEGLSADLDAVVLKALA 259
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 207 VKLATSARHSQDVAIKIISK--VQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTH 264
V LA R +DVA+K++ + P YL+ RE + L HP ++ E
Sbjct: 28 VHLARDLRDHRDVAVKVLRADLARDPSFYLR--FRREAQNAAALNHPAIVAVYDTGEAET 85
Query: 265 RV----YIIMEYAKNGSLLEVIRKERYIDEDKAL 294
YI+MEY +L +++ E + +A+
Sbjct: 86 PAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI 119
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 73/147 (49%), Gaps = 9/147 (6%)
Query: 13 RRWFSQLADA---IDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQ 69
+R +ADA +++ H+ ++HRD+K N+++ +K+ DFG AR + + Q
Sbjct: 116 KRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 70 NLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQ 129
+ G+ Y SPE +G +SD++S+G VL+ ++ G PF + + Q
Sbjct: 176 --TAAVIGTAQYLSPEQARG-DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHV 232
Query: 130 KRVVFPESPR---LSSSCKALISNILS 153
+ P S R LS+ A++ L+
Sbjct: 233 REDPIPPSARHEGLSADLDAVVLKALA 259
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 207 VKLATSARHSQDVAIKIISK--VQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTH 264
V LA R +DVA+K++ + P YL+ RE + L HP ++ E
Sbjct: 28 VHLARDLRDHRDVAVKVLRADLARDPSFYLR--FRREAQNAAALNHPAIVAVYDTGEAET 85
Query: 265 RV----YIIMEYAKNGSLLEVIRKERYIDEDKAL 294
YI+MEY +L +++ E + +A+
Sbjct: 86 PAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI 119
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q A+++CHK + +HRD+K EN+L+ IKL DFGFAR + + Y ++ +
Sbjct: 110 QTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRW-- 167
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYG 112
Y SPE+L G D+W++G V ++ G
Sbjct: 168 ---YRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 202 SSYATVKLATSARHSQDVAIK-IISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAI 260
SY V + Q VAIK + P+ +KK REI ++K LKHPNL+ L+
Sbjct: 14 GSYGVVFKCRNRDTGQIVAIKKFLESEDDPV--IKKIALREIRMLKQLKHPNLVNLLEVF 71
Query: 261 ETTHRVYIIMEYAKNGSLLEVIRKERYIDE 290
R++++ EY + L E+ R +R + E
Sbjct: 72 RRKRRLHLVFEYCDHTVLHELDRYQRGVPE 101
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
W Q+A + Y +VHRD+ N+L+ ++K++DFG AR ++ T+Y + +
Sbjct: 124 WCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKV 183
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVV 133
A S IL+ +T QSD+WS GV ++ M +G P+D E+ ++K
Sbjct: 184 PIKWMALES--ILRRR-FT-HQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGER 239
Query: 134 FPESP 138
P+ P
Sbjct: 240 LPQPP 244
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 73/124 (58%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A+ + + +++ +HRD++ N+L+ D + K++DFG AR + + +Y F
Sbjct: 121 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEYTAREGAKF- 177
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE + +T +SD+WS G++L +V +GR+P+ E+++ +++ R+V
Sbjct: 178 -PIKWTAPEAINYGTFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 235
Query: 134 FPES 137
P++
Sbjct: 236 RPDN 239
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 241 EIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIR 283
E ++K L+H L+R L A+ T +YII EY +NGSL++ ++
Sbjct: 63 EANLMKQLQHQRLVR-LYAVVTQEPIYIITEYMENGSLVDFLK 104
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 73/124 (58%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A+ + + +++ +HRD++ N+L+ D + K++DFG AR + + +Y F
Sbjct: 111 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEYTAREGAKF- 167
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE + +T +SD+WS G++L +V +GR+P+ E+++ +++ R+V
Sbjct: 168 -PIKWTAPEAINYGTFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 225
Query: 134 FPES 137
P++
Sbjct: 226 RPDN 229
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 241 EIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIR 283
E ++K L+H L+R L A+ T +YII EY +NGSL++ ++
Sbjct: 53 EANLMKQLQHQRLVR-LYAVVTQEPIYIITEYMENGSLVDFLK 94
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 73/124 (58%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A+ + + +++ +HRD++ N+L+ D + K++DFG AR + + +Y F
Sbjct: 122 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEYTAREGAKF- 178
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE + +T +SD+WS G++L +V +GR+P+ E+++ +++ R+V
Sbjct: 179 -PIKWTAPEAINYGTFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 236
Query: 134 FPES 137
P++
Sbjct: 237 RPDN 240
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 241 EIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIR 283
E ++K L+H L+R L A+ T +YII EY +NGSL++ ++
Sbjct: 64 EANLMKQLQHQRLVR-LYAVVTQEPIYIITEYMENGSLVDFLK 105
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 73/124 (58%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A+ + + +++ +HRD++ N+L+ D + K++DFG AR + + +Y F
Sbjct: 116 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEYTAREGAKF- 172
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE + +T +SD+WS G++L +V +GR+P+ E+++ +++ R+V
Sbjct: 173 -PIKWTAPEAINYGTFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 230
Query: 134 FPES 137
P++
Sbjct: 231 RPDN 234
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 241 EIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIR 283
E ++K L+H L+R L A+ T +YII EY +NGSL++ ++
Sbjct: 58 EANLMKQLQHQRLVR-LYAVVTQEPIYIITEYMENGSLVDFLK 99
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
W Q+A ++Y + +VHRD+ N+L+ ++K++DFG A+ +Y +
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 183
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVV 133
A S IL + YT QSD+WS GV ++ M +G P+D SE+ ++K
Sbjct: 184 PIKWMALES--ILHRI-YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 239
Query: 134 FPESP 138
P+ P
Sbjct: 240 LPQPP 244
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
W Q+A ++Y + +VHRD+ N+L+ ++K++DFG A+ +Y +
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 188
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVV 133
A S IL + YT QSD+WS GV ++ M +G P+D SE+ ++K
Sbjct: 189 PIKWMALES--ILHRI-YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 244
Query: 134 FPESP 138
P+ P
Sbjct: 245 LPQPP 249
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
W Q+A ++Y + +VHRD+ N+L+ ++K++DFG A+ +Y +
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 181
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVV 133
A S IL + YT QSD+WS GV ++ M +G P+D SE+ ++K
Sbjct: 182 PIKWMALES--ILHRI-YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 237
Query: 134 FPESP 138
P+ P
Sbjct: 238 LPQPP 242
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
W Q+A ++Y + +VHRD+ N+L+ ++K++DFG A+ +Y +
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 183
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVV 133
A S IL + YT QSD+WS GV ++ M +G P+D SE+ ++K
Sbjct: 184 PIKWMALES--ILHRI-YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 239
Query: 134 FPESP 138
P+ P
Sbjct: 240 LPQPP 244
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
W Q+A ++Y + +VHRD+ N+L+ ++K++DFG A+ +Y +
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 183
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVV 133
A S IL + YT QSD+WS GV ++ M +G P+D SE+ ++K
Sbjct: 184 PIKWMALES--ILHRI-YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 239
Query: 134 FPESP 138
P+ P
Sbjct: 240 LPQPP 244
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 73/124 (58%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A+ + + +++ +HRD++ N+L+ D + K++DFG AR + + +Y F
Sbjct: 126 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEYTAREGAKF- 182
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE + +T +SD+WS G++L +V +GR+P+ E+++ +++ R+V
Sbjct: 183 -PIKWTAPEAINYGTFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 240
Query: 134 FPES 137
P++
Sbjct: 241 RPDN 244
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 241 EIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIR 283
E ++K L+H L+R L A+ T +YII EY +NGSL++ ++
Sbjct: 68 EANLMKQLQHQRLVR-LYAVVTQEPIYIITEYMENGSLVDFLK 109
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
W Q+A ++Y + +VHRD+ N+L+ ++K++DFG A+ +Y +
Sbjct: 126 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 185
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVV 133
A S IL + YT QSD+WS GV ++ M +G P+D SE+ ++K
Sbjct: 186 PIKWMALES--ILHRI-YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 241
Query: 134 FPESP 138
P+ P
Sbjct: 242 LPQPP 246
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 82/164 (50%), Gaps = 13/164 (7%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLL--DDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ Q+ + I + H+ ++H D+K EN+L D IK+ DFG AR+Y ++ L
Sbjct: 192 FMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKP-----REKLK 246
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV---Q 129
F G+ + +PE++ + +D+WS+GV+ + ++ G PF N +E L + +
Sbjct: 247 VNF-GTPEFLAPEVVN-YDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACR 304
Query: 130 KRVVFPESPRLSSSCKALISNILSPVK-FRIQMEDIRQDPWLKE 172
+ E +S K IS +L K +RI + + PWL +
Sbjct: 305 WDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSD 348
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 219 VAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSL 278
+A KII K + D K+ + EI V+ L H NLI+ A E+ + + ++MEY G L
Sbjct: 117 LAAKII-KTRGMKD--KEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173
Query: 279 LEVIRKERY 287
+ I E Y
Sbjct: 174 FDRIIDESY 182
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 73/137 (53%), Gaps = 10/137 (7%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A+ + + +++ +HRD++ N+L+ K++DFG AR + + +Y F
Sbjct: 118 AQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR--VIEDNEYTAREGAKF- 174
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSELLKQVQKRVVFP 135
+ +PE + +T +SD+WS G++L +V YGR+P+ + E+++ +++ P
Sbjct: 175 -PIKWTAPEAINFGSFT-IKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMP 232
Query: 136 ESPRLSSSCKALISNIL 152
+C + NI+
Sbjct: 233 R----PENCPEELYNIM 245
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V +AT +H++ VA+K + ++ FL E V+K L+H L++ L A+
Sbjct: 26 GQFGEVWMATYNKHTK-VAVKTMKPGSMSVE---AFL-AEANVMKTLQHDKLVK-LHAVV 79
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKE 285
T +YII E+ GSLL+ ++ +
Sbjct: 80 TKEPIYIITEFMAKGSLLDFLKSD 103
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 73/147 (49%), Gaps = 9/147 (6%)
Query: 13 RRWFSQLADA---IDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQ 69
+R +ADA +++ H+ ++HRD+K N+++ +K+ DFG AR + + Q
Sbjct: 133 KRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 192
Query: 70 NLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQ 129
+ G+ Y SPE +G +SD++S+G VL+ ++ G PF + + Q
Sbjct: 193 --TAAVIGTAQYLSPEQARG-DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV 249
Query: 130 KRVVFPESPR---LSSSCKALISNILS 153
+ P S R LS+ A++ L+
Sbjct: 250 REDPIPPSARHEGLSADLDAVVLKALA 276
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 8/99 (8%)
Query: 202 SSYATVKLATSARHSQDVAIKIISK--VQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQA 259
+ V LA R +DVA+K++ + P YL+ RE + L HP ++
Sbjct: 40 GGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLR--FRREAQNAAALNHPAIVAVYDT 97
Query: 260 IETTHRV----YIIMEYAKNGSLLEVIRKERYIDEDKAL 294
E YI+MEY +L +++ E + +A+
Sbjct: 98 GEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI 136
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 9/158 (5%)
Query: 2 DILLDYNTDKARRWFSQLADA---IDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFAR 58
DI+ +R +ADA +++ H+ ++HRD+K N+++ +K+ DFG AR
Sbjct: 105 DIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR 164
Query: 59 KYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDD 118
+ + Q + G+ Y SPE +G +SD++S+G VL+ ++ G PF
Sbjct: 165 AIADSGNSVTQ--TAAVIGTAQYLSPEQARG-DSVDARSDVYSLGCVLYEVLTGEPPFTG 221
Query: 119 TNYSELLKQVQKRVVFPESPR---LSSSCKALISNILS 153
+ + Q + P S R LS+ A++ L+
Sbjct: 222 DSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALA 259
Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 207 VKLATSARHSQDVAIKIISK--VQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTH 264
V LA R +DVA+K++ + P YL+ RE + L HP ++ E
Sbjct: 28 VHLARDLRLHRDVAVKVLRADLARDPSFYLR--FRREAQNAAALNHPAIVAVYATGEAET 85
Query: 265 RV----YIIMEYAKNGSLLEVIRKERYIDEDKAL 294
YI+MEY +L +++ E + +A+
Sbjct: 86 PAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI 119
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 9/158 (5%)
Query: 2 DILLDYNTDKARRWFSQLADA---IDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFAR 58
DI+ +R +ADA +++ H+ ++HRD+K N+++ +K+ DFG AR
Sbjct: 105 DIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR 164
Query: 59 KYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDD 118
+ + Q + G+ Y SPE +G +SD++S+G VL+ ++ G PF
Sbjct: 165 AIADSGNSVTQ--TAAVIGTAQYLSPEQARG-DSVDARSDVYSLGCVLYEVLTGEPPFTG 221
Query: 119 TNYSELLKQVQKRVVFPESPR---LSSSCKALISNILS 153
+ + Q + P S R LS+ A++ L+
Sbjct: 222 DSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALA 259
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 207 VKLATSARHSQDVAIKIISK--VQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTH 264
V LA R +DVA+K++ + P YL+ RE + L HP ++ E
Sbjct: 28 VHLARDLRLHRDVAVKVLRADLARDPSFYLR--FRREAQNAAALNHPAIVAVYDTGEAET 85
Query: 265 RV----YIIMEYAKNGSLLEVIRKERYIDEDKAL 294
YI+MEY +L +++ E + +A+
Sbjct: 86 PAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI 119
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
+ Q+ + Y H +V+HRD+K NLLL+ ++K+ DFG AR ++ D+ L+E
Sbjct: 127 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DHTGFLTE- 184
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVF 134
+ + Y +PEI+ + DIWS+G +L M+ R F +Y + L + +
Sbjct: 185 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 244
Query: 135 PESPRLS 141
PE L+
Sbjct: 245 PEQEDLN 251
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 73/147 (49%), Gaps = 9/147 (6%)
Query: 13 RRWFSQLADA---IDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQ 69
+R +ADA +++ H+ ++HRD+K N+++ +K+ DFG AR + + Q
Sbjct: 116 KRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 70 NLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQ 129
+ G+ Y SPE +G +SD++S+G VL+ ++ G PF + + Q
Sbjct: 176 --TAAVIGTAQYLSPEQARG-DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV 232
Query: 130 KRVVFPESPR---LSSSCKALISNILS 153
+ P S R LS+ A++ L+
Sbjct: 233 REDPIPPSARHEGLSADLDAVVLKALA 259
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 207 VKLATSARHSQDVAIKIISK--VQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTH 264
V LA R +DVA+K++ + P YL+ RE + L HP ++ E
Sbjct: 28 VHLARDLRDHRDVAVKVLRADLARDPSFYLR--FRREAQNAAALNHPAIVAVYDTGEAET 85
Query: 265 RV----YIIMEYAKNGSLLEVIRKERYIDEDKAL 294
YI+MEY +L +++ E + +A+
Sbjct: 86 PAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI 119
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 61/105 (58%), Gaps = 9/105 (8%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
R + +++ +++ H + VV+RD+K N+LLD+ ++++SD G A D+ +
Sbjct: 294 RFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-------CDFSKKKP 346
Query: 73 ETFCGSYAYASPEIL-KGVPYTPQQSDIWSMGVVLFAMVYGRLPF 116
G++ Y +PE+L KGV Y +D +S+G +LF ++ G PF
Sbjct: 347 HASVGTHGYMAPEVLQKGVAYD-SSADWFSLGCMLFKLLRGHSPF 390
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 61/105 (58%), Gaps = 9/105 (8%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
R + +++ +++ H + VV+RD+K N+LLD+ ++++SD G A D+ +
Sbjct: 295 RFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-------CDFSKKKP 347
Query: 73 ETFCGSYAYASPEIL-KGVPYTPQQSDIWSMGVVLFAMVYGRLPF 116
G++ Y +PE+L KGV Y +D +S+G +LF ++ G PF
Sbjct: 348 HASVGTHGYMAPEVLQKGVAYD-SSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 61/105 (58%), Gaps = 9/105 (8%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
R + +++ +++ H + VV+RD+K N+LLD+ ++++SD G A D+ +
Sbjct: 295 RFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-------CDFSKKKP 347
Query: 73 ETFCGSYAYASPEIL-KGVPYTPQQSDIWSMGVVLFAMVYGRLPF 116
G++ Y +PE+L KGV Y +D +S+G +LF ++ G PF
Sbjct: 348 HASVGTHGYMAPEVLQKGVAYD-SSADWFSLGCMLFKLLRGHSPF 391
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 61/105 (58%), Gaps = 9/105 (8%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
R + +++ +++ H + VV+RD+K N+LLD+ ++++SD G A D+ +
Sbjct: 295 RFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-------CDFSKKKP 347
Query: 73 ETFCGSYAYASPEIL-KGVPYTPQQSDIWSMGVVLFAMVYGRLPF 116
G++ Y +PE+L KGV Y +D +S+G +LF ++ G PF
Sbjct: 348 HASVGTHGYMAPEVLQKGVAYD-SSADWFSLGCMLFKLLRGHSPF 391
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 62/114 (54%), Gaps = 5/114 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
QLA ++Y + +HRD+ N+L+ + +K++DFG AR +NN DY +N +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKNTTNGRL- 221
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK 130
+ +PE L YT QSD+WS GV+++ + G P+ EL K +++
Sbjct: 222 PVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 241 EIEVVKGL-KHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKER 286
E+E++K + KH N+I L A +Y+I+EYA G+L E +R R
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR 136
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 88/176 (50%), Gaps = 20/176 (11%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTD 66
+ + + + +L A+DY + ++HRD+K +N+LLD+ ++ ++DF A
Sbjct: 112 FKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP----- 166
Query: 67 YKQNLSETFCGSYAYASPEIL---KGVPYTPQQSDIWSMGVVLFAMVYGRLPF---DDTN 120
++ T G+ Y +PE+ KG Y+ D WS+GV + ++ GR P+ T+
Sbjct: 167 -RETQITTMAGTKPYMAPEMFSSRKGAGYS-FAVDWWSLGVTAYELLRGRRPYHIRSSTS 224
Query: 121 YSELLKQVQKRVV-FPESPRLSSSCKALISNILSP---VKFRIQMEDIRQDPWLKE 172
E++ + VV +P + S +L+ +L P +F Q+ D++ P++ +
Sbjct: 225 SKEIVHTFETTVVTYPSA--WSQEMVSLLKKLLEPNPDQRFS-QLSDVQNFPYMND 277
Score = 28.1 bits (61), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 11/61 (18%), Positives = 33/61 (54%)
Query: 240 REIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSE 299
+E+++++GL+HP L+ + + ++++++ G L +++ + E+ L E
Sbjct: 64 KELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICE 123
Query: 300 V 300
+
Sbjct: 124 L 124
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
+ Q+ + Y H +V+HRD+K NLLL+ ++K+ DFG AR ++ D+ L+E
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDH-DHTGFLTE- 186
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+ + Y +PEI+ + DIWS+G +L M+ R F +Y + L +
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 12/127 (9%)
Query: 3 ILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFGFARKYS 61
IL D++ R + +L A+DYCH K ++HRD+K N+++D + ++L D+G A Y
Sbjct: 128 ILTDFDI---RFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYH 184
Query: 62 VNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF--DDT 119
+ S F G PE+L D+WS+G +L +M++ R PF
Sbjct: 185 PAQEYNVRVASRYFKG------PELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQD 238
Query: 120 NYSELLK 126
NY +L++
Sbjct: 239 NYDQLVR 245
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 73/137 (53%), Gaps = 10/137 (7%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A+ + + +++ +HRD++ N+L+ K++DFG AR + + +Y F
Sbjct: 291 AQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR--VIEDNEYTAREGAKF- 347
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSELLKQVQKRVVFP 135
+ +PE + +T +SD+WS G++L +V YGR+P+ + E+++ +++ P
Sbjct: 348 -PIKWTAPEAINFGSFT-IKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMP 405
Query: 136 ESPRLSSSCKALISNIL 152
+C + NI+
Sbjct: 406 R----PENCPEELYNIM 418
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V +AT +H++ VA+K + ++ FL E V+K L+H L++ L A+
Sbjct: 199 GQFGEVWMATYNKHTK-VAVKTMKPGSMSVE---AFLA-EANVMKTLQHDKLVK-LHAVV 252
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKE 285
T +YII E+ GSLL+ ++ +
Sbjct: 253 TKEPIYIITEFMAKGSLLDFLKSD 276
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR +TD + +
Sbjct: 156 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM---XGYVA 207
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 208 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 267
Query: 138 PRL 140
L
Sbjct: 268 ELL 270
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 56 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 114
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 115 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 161
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ D+G AR T Y
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGY--------VA 184
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 138 PRL 140
L
Sbjct: 245 ELL 247
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 92 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
+ Q+ + Y H +V+HRD+K NLLL+ ++K+ DFG AR ++ D+ L+E
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH-DHTGFLTE- 186
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+ + Y +PEI+ + DIWS+G +L M+ R F +Y + L +
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
+ Q+ + Y H +V+HRD+K NLLL+ ++K+ DFG AR ++ D+ L+E
Sbjct: 149 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH-DHTGFLTE- 206
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+ + Y +PEI+ + DIWS+G +L M+ R F +Y + L +
Sbjct: 207 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 260
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG R T Y
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGY--------VA 184
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 138 PRL 140
L
Sbjct: 245 ELL 247
Score = 31.6 bits (70), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 92 PARSLEEFNDVYLVT-HLMGADLNNIVKSQKLTDDHVQFLIYQILRGL 138
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 8/107 (7%)
Query: 22 AIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGSYAY 81
++Y H+ ++HRD+K NLLLD+ +KL+DFG A+ + N Y + + Y
Sbjct: 124 GLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRW-----Y 178
Query: 82 ASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF--DDTNYSELLK 126
+PE+L G D+W++G +L ++ R+PF D++ +L +
Sbjct: 179 RAPELLFGARMYGVGVDMWAVGCILAELLL-RVPFLPGDSDLDQLTR 224
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 202 SSYATVKLATSARHSQDVAIKII--SKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQA 259
+ATV A +Q VAIK I D + + REI++++ L HPN+I L A
Sbjct: 21 GQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDA 80
Query: 260 IETTHRVYIIMEYAKNGSLLEVIRKE 285
+ ++ ++ + LEVI K+
Sbjct: 81 FGHKSNISLVFDFMETD--LEVIIKD 104
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
+ Q+ + Y H +V+HRD+K NLLL+ ++K+ DFG AR ++ D+ L+E
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH-DHTGFLTE- 186
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+ + Y +PEI+ + DIWS+G +L M+ R F +Y + L +
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
+ Q+ + Y H +V+HRD+K NLLL+ ++K+ DFG AR ++ D+ L+E
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH-DHTGFLTE- 190
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+ + Y +PEI+ + DIWS+G +L M+ R F +Y + L +
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
+ Q+ + Y H +V+HRD+K NLLL+ ++K+ DFG AR ++ D+ L+E
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH-DHTGFLTE- 190
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+ + Y +PEI+ + DIWS+G +L M+ R F +Y + L +
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 12/127 (9%)
Query: 3 ILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKY-NIKLSDFGFARKYS 61
IL D++ R + +L A+DYCH K ++HRD+K N+++D + ++L D+G A Y
Sbjct: 133 ILTDFDI---RFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYH 189
Query: 62 VNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF--DDT 119
+ S F G PE+L D+WS+G +L +M++ R PF
Sbjct: 190 PAQEYNVRVASRYFKG------PELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQD 243
Query: 120 NYSELLK 126
NY +L++
Sbjct: 244 NYDQLVR 250
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 71/124 (57%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A+ + + +++ +HRD++ N+L+ D + K++DFG AR N ++
Sbjct: 118 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI- 176
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE + +T +SD+WS G++L +V +GR+P+ E+++ +++ R+V
Sbjct: 177 ---KWTAPEAINYGTFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 232
Query: 134 FPES 137
P++
Sbjct: 233 RPDN 236
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 241 EIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIR 283
E ++K L+H L+R L A+ T +YII EY +NGSL++ ++
Sbjct: 60 EANLMKQLQHQRLVR-LYAVVTQEPIYIITEYMENGSLVDFLK 101
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 71/124 (57%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A+ + + +++ +HRD++ N+L+ D + K++DFG AR N ++
Sbjct: 116 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI- 174
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE + +T +SD+WS G++L +V +GR+P+ E+++ +++ R+V
Sbjct: 175 ---KWTAPEAINYGTFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 230
Query: 134 FPES 137
P++
Sbjct: 231 RPDN 234
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 241 EIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIR 283
E ++K L+H L+R L A+ T +YII EY +NGSL++ ++
Sbjct: 58 EANLMKQLQHQRLVR-LYAVVTQEPIYIITEYMENGSLVDFLK 99
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 71/124 (57%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A+ + + +++ +HRD++ N+L+ D + K++DFG AR N ++
Sbjct: 117 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI- 175
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE + +T +SD+WS G++L +V +GR+P+ E+++ +++ R+V
Sbjct: 176 ---KWTAPEAINYGTFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 231
Query: 134 FPES 137
P++
Sbjct: 232 RPDN 235
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 241 EIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIR 283
E ++K L+H L+R L A+ T +YII EY +NGSL++ ++
Sbjct: 59 EANLMKQLQHQRLVR-LYAVVTQEPIYIITEYMENGSLVDFLK 100
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 71/124 (57%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A+ + + +++ +HRD++ N+L+ D + K++DFG AR N ++
Sbjct: 116 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI- 174
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE + +T +SD+WS G++L +V +GR+P+ E+++ +++ R+V
Sbjct: 175 ---KWTAPEAINYGTFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 230
Query: 134 FPES 137
P++
Sbjct: 231 RPDN 234
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 241 EIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIR 283
E ++K L+H L+R L A+ T +YII EY +NGSL++ ++
Sbjct: 58 EANLMKQLQHQRLVR-LYAVVTQEPIYIITEYMENGSLVDFLK 99
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 71/124 (57%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A+ + + +++ +HRD++ N+L+ D + K++DFG AR N ++
Sbjct: 125 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI- 183
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE + +T +SD+WS G++L +V +GR+P+ E+++ +++ R+V
Sbjct: 184 ---KWTAPEAINYGTFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 239
Query: 134 FPES 137
P++
Sbjct: 240 RPDN 243
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 241 EIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIR 283
E ++K L+H L+R L A+ T +YII EY +NGSL++ ++
Sbjct: 67 EANLMKQLQHQRLVR-LYAVVTQEPIYIITEYMENGSLVDFLK 108
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 14/112 (12%)
Query: 20 ADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQ-NLSETFCGS 78
A + Y H ++++HRD+K N+LLD+ + K++DFG ++K T+ Q +L G+
Sbjct: 149 ARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKK----GTELGQTHLXXVVKGT 204
Query: 79 YAYASPE-ILKGVPYTPQQSDIWSMGVVLFAMVYGR------LPFDDTNYSE 123
Y PE +KG ++SD++S GVVLF ++ R LP + N +E
Sbjct: 205 LGYIDPEYFIKG--RLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAE 254
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
W Q+A + Y ++ +VHRD+ N+L+ ++K++DFG AR + +Y + +
Sbjct: 145 WCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKM 204
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVV 133
+ + E + +T QSD+WS GV ++ M +G P+D E+ ++K
Sbjct: 205 ---PIKWMALECIHYRKFT-HQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGER 260
Query: 134 FPESP 138
P+ P
Sbjct: 261 LPQPP 265
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 71/124 (57%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A+ + + +++ +HRD++ N+L+ D + K++DFG AR N ++
Sbjct: 124 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI- 182
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE + +T +SD+WS G++L +V +GR+P+ E+++ +++ R+V
Sbjct: 183 ---KWTAPEAINYGTFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 238
Query: 134 FPES 137
P++
Sbjct: 239 RPDN 242
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 241 EIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIR 283
E ++K L+H L+R L A+ T +YII EY +NGSL++ ++
Sbjct: 66 EANLMKQLQHQRLVR-LYAVVTQEPIYIITEYMENGSLVDFLK 107
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 71/124 (57%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A+ + + +++ +HRD++ N+L+ D + K++DFG AR N ++
Sbjct: 122 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI- 180
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE + +T +SD+WS G++L +V +GR+P+ E+++ +++ R+V
Sbjct: 181 ---KWTAPEAINYGTFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 236
Query: 134 FPES 137
P++
Sbjct: 237 RPDN 240
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 241 EIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIR 283
E ++K L+H L+R L A+ T +YII EY +NGSL++ ++
Sbjct: 64 EANLMKQLQHQRLVR-LYAVVTQEPIYIITEYMENGSLVDFLK 105
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 73/124 (58%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A+ + + +++ +HR+++ N+L+ D + K++DFG AR + + +Y F
Sbjct: 112 AQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLAR--LIEDNEYTAREGAKF- 168
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE + +T +SD+WS G++L +V +GR+P+ E+++ +++ R+V
Sbjct: 169 -PIKWTAPEAINYGTFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 226
Query: 134 FPES 137
P++
Sbjct: 227 RPDN 230
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 241 EIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIR 283
E ++K L+H L+R L A+ T +YII EY +NGSL++ ++
Sbjct: 54 EANLMKQLQHQRLVR-LYAVVTQEPIYIITEYMENGSLVDFLK 95
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR T Y
Sbjct: 162 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------VA 213
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + DIWS+G ++ ++ GR F T++ L+Q+ + P +
Sbjct: 214 TRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPA 273
Query: 138 PRLS 141
+S
Sbjct: 274 SVIS 277
Score = 27.7 bits (60), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 51/108 (47%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQ--- 258
+Y +V + + +A+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 62 GAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 120
Query: 259 ---AIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 121 PATSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 167
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 62/118 (52%), Gaps = 13/118 (11%)
Query: 7 YNTDKARRWFSQLADAIDYCHK---KSVVHRDIKCENLLLDDKYNI-KLSDFGFARKYSV 62
Y A W Q + + Y H K+++HRD+K NLLL + K+ DFG A
Sbjct: 100 YTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 159
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTN 120
+ T+ K GS A+ +PE+ +G Y+ ++ D++S G++L+ ++ R PFD+
Sbjct: 160 HMTNNK--------GSAAWMAPEVFEGSNYS-EKCDVFSWGIILWEVITRRKPFDEIG 208
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 216 SQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKN 275
++DVAIK I + +K E+ + + HPN+++ A + V ++MEYA+
Sbjct: 32 AKDVAIKQIES-----ESERKAFIVELRQLSRVNHPNIVKLYGA--CLNPVCLVMEYAEG 84
Query: 276 GSLLEVI 282
GSL V+
Sbjct: 85 GSLYNVL 91
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 71/124 (57%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A+ + + +++ +HRD++ N+L+ D + K++DFG AR D + E
Sbjct: 116 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE----DAEXTAREGAK 171
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE + +T +SD+WS G++L +V +GR+P+ E+++ +++ R+V
Sbjct: 172 FPIKWTAPEAINYGTFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 230
Query: 134 FPES 137
P++
Sbjct: 231 RPDN 234
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 241 EIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIR 283
E ++K L+H L+R L A+ T +YII EY +NGSL++ ++
Sbjct: 58 EANLMKQLQHQRLVR-LYAVVTQEPIYIITEYMENGSLVDFLK 99
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 14/112 (12%)
Query: 20 ADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQ-NLSETFCGS 78
A + Y H ++++HRD+K N+LLD+ + K++DFG ++K T+ Q +L G+
Sbjct: 149 ARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKK----GTELDQTHLXXVVKGT 204
Query: 79 YAYASPE-ILKGVPYTPQQSDIWSMGVVLFAMVYGR------LPFDDTNYSE 123
Y PE +KG ++SD++S GVVLF ++ R LP + N +E
Sbjct: 205 LGYIDPEYFIKG--RLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAE 254
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
+ Q+ + Y H +V+HRD+K NLLL+ ++K+ DFG AR ++ D+ L+E
Sbjct: 149 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DHTGFLTE- 206
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+ + Y +PEI+ + DIWS+G +L M+ R F +Y + L +
Sbjct: 207 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 260
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
+ Q+ + Y H +V+HRD+K NLLL+ ++K+ DFG AR ++ D+ L+E
Sbjct: 131 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDH-DHTGFLTE- 188
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+ + Y +PEI+ + DIWS+G +L M+ R F +Y + L +
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 242
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
+ Q+ + Y H +V+HRD+K NLLL+ ++K+ DFG AR ++ D+ L+E
Sbjct: 131 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DHTGFLTE- 188
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+ + Y +PEI+ + DIWS+G +L M+ R F +Y + L +
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 242
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
+ Q+ + Y H +V+HRD+K NLLL+ ++K+ DFG AR ++ D+ L+E
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DHTGFLTE- 190
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+ + Y +PEI+ + DIWS+G +L M+ R F +Y + L +
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
+ Q+ + Y H +V+HRD+K NLLL+ ++K+ DFG AR ++ D+ L+E
Sbjct: 131 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DHTGFLTE- 188
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+ + Y +PEI+ + DIWS+G +L M+ R F +Y + L +
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 242
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
+ Q+ + Y H +V+HRD+K NLLL+ ++K+ DFG AR ++ D+ L+E
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DHTGFLTE- 186
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+ + Y +PEI+ + DIWS+G +L M+ R F +Y + L +
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
+ Q+ + Y H +V+HRD+K NLLL+ ++K+ DFG AR ++ D+ L+E
Sbjct: 134 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DHTGFLTE- 191
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+ + Y +PEI+ + DIWS+G +L M+ R F +Y + L +
Sbjct: 192 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 245
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
+ Q+ + Y H +V+HRD+K NLLL+ ++K+ DFG AR ++ D+ L+E
Sbjct: 135 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DHTGFLTE- 192
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+ + Y +PEI+ + DIWS+G +L M+ R F +Y + L +
Sbjct: 193 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 246
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
+ Q+ + Y H +V+HRD+K NLLL+ ++K+ DFG AR ++ D+ L+E
Sbjct: 126 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DHTGFLTE- 183
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+ + Y +PEI+ + DIWS+G +L M+ R F +Y + L +
Sbjct: 184 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 237
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
+ Q+ + Y H +V+HRD+K NLLL+ ++K+ DFG AR ++ D+ L+E
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DHTGFLTE- 190
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+ + Y +PEI+ + DIWS+G +L M+ R F +Y + L +
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
+ Q+ + Y H +V+HRD+K NLLL+ ++K+ DFG AR ++ D+ L+E
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DHTGFLTE- 190
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+ + Y +PEI+ + DIWS+G +L M+ R F +Y + L +
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
+ Q+ + Y H +V+HRD+K NLLL+ ++K+ DFG AR ++ D+ L+E
Sbjct: 137 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DHTGFLTE- 194
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+ + Y +PEI+ + DIWS+G +L M+ R F +Y + L +
Sbjct: 195 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 248
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
+ Q+ + Y H +V+HRD+K NLLL+ ++K+ DFG AR ++ D+ L+E
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DHTGFLTE- 186
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+ + Y +PEI+ + DIWS+G +L M+ R F +Y + L +
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 62/118 (52%), Gaps = 13/118 (11%)
Query: 7 YNTDKARRWFSQLADAIDYCHK---KSVVHRDIKCENLLLDDKYNI-KLSDFGFARKYSV 62
Y A W Q + + Y H K+++HRD+K NLLL + K+ DFG A
Sbjct: 99 YTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 158
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTN 120
+ T+ K GS A+ +PE+ +G Y+ ++ D++S G++L+ ++ R PFD+
Sbjct: 159 HMTNNK--------GSAAWMAPEVFEGSNYS-EKCDVFSWGIILWEVITRRKPFDEIG 207
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 216 SQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKN 275
++DVAIK I + +K E+ + + HPN+++ A + V ++MEYA+
Sbjct: 31 AKDVAIKQIES-----ESERKAFIVELRQLSRVNHPNIVKLYGA--CLNPVCLVMEYAEG 83
Query: 276 GSLLEVI 282
GSL V+
Sbjct: 84 GSLYNVL 90
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
+ Q+ + Y H +V+HRD+K NLLL+ ++K+ DFG AR ++ D+ L+E
Sbjct: 127 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DHTGFLTE- 184
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+ + Y +PEI+ + DIWS+G +L M+ R F +Y + L +
Sbjct: 185 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 238
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ FG AR T Y
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGY--------VA 184
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 138 PRL 140
L
Sbjct: 245 ELL 247
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 92 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 64/126 (50%), Gaps = 14/126 (11%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR +TD + G
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTD------DEMTG 181
Query: 78 SYA---YASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVF 134
A Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V
Sbjct: 182 XVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 135 PESPRL 140
P + L
Sbjct: 242 PGAELL 247
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 92 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
W Q+A + Y ++ +VHRD+ N+L+ ++K++DFG AR + +Y + +
Sbjct: 122 WCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKM 181
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVV 133
+ + E + +T QSD+WS GV ++ M +G P+D E+ ++K
Sbjct: 182 ---PIKWMALECIHYRKFT-HQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGER 237
Query: 134 FPESP 138
P+ P
Sbjct: 238 LPQPP 242
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 14/181 (7%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN--IKLSDFGFARKYSVNNTDY 67
D+A + Q+ + + H+ + VH D+K EN++ K + +KL DFG + D
Sbjct: 255 DEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGL-----TAHLDP 309
Query: 68 KQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQ 127
KQ++ T G+ +A+PE+ +G P +D+WS+GV+ + ++ G PF N E L+
Sbjct: 310 KQSVKVT-TGTAEFAAPEVAEGKPVG-YYTDMWSVGVLSYILLSGLSPFGGENDDETLRN 367
Query: 128 VQK---RVVFPESPRLSSSCKALISN-ILSPVKFRIQMEDIRQDPWLKEDSNPVGKSKSA 183
V+ + +S K I +L+ R+ + + PWL + P G+
Sbjct: 368 VKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAP-GRDSQI 426
Query: 184 P 184
P
Sbjct: 427 P 427
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
++ V T + A K V P + K+ + +EI+ + L+HP L+ A E
Sbjct: 168 GAFGVVHRVTERATGNNFAAKF---VMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKER-YIDEDKAL 294
+ + +I E+ G L E + E + ED+A+
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAV 258
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 88/170 (51%), Gaps = 16/170 (9%)
Query: 9 TDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYK 68
T+ + QL +D+ H VVHRD+K +N+L+ IKL+DFG AR YS ++
Sbjct: 119 TETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS-----FQ 173
Query: 69 QNLSETFCGSYAYASPEILKGVPY-TPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLK 126
L+ + Y +PE+L Y TP D+WS+G + FA ++ R P F ++ + L
Sbjct: 174 MALTSVVVTLW-YRAPEVLLQSSYATP--VDLWSVGCI-FAEMFRRKPLFRGSSDVDQLG 229
Query: 127 QVQKRVVFP---ESPR-LSSSCKALISNILSPV-KFRIQMEDIRQDPWLK 171
++ + P + PR ++ +A S P+ KF ++++ +D LK
Sbjct: 230 KILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLK 279
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 14/181 (7%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN--IKLSDFGFARKYSVNNTDY 67
D+A + Q+ + + H+ + VH D+K EN++ K + +KL DFG + D
Sbjct: 149 DEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGL-----TAHLDP 203
Query: 68 KQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQ 127
KQ++ T G+ +A+PE+ +G P +D+WS+GV+ + ++ G PF N E L+
Sbjct: 204 KQSVKVT-TGTAEFAAPEVAEGKPVG-YYTDMWSVGVLSYILLSGLSPFGGENDDETLRN 261
Query: 128 VQK---RVVFPESPRLSSSCKALISN-ILSPVKFRIQMEDIRQDPWLKEDSNPVGKSKSA 183
V+ + +S K I +L+ R+ + + PWL + P G+
Sbjct: 262 VKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAP-GRDSQI 320
Query: 184 P 184
P
Sbjct: 321 P 321
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
++ V T + A K V P + K+ + +EI+ + L+HP L+ A E
Sbjct: 62 GAFGVVHRVTERATGNNFAAKF---VMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKER-YIDEDKAL 294
+ + +I E+ G L E + E + ED+A+
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAV 152
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 67/120 (55%), Gaps = 6/120 (5%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A+ + Y +K+ +HRD++ N+L+ + K++DFG AR + + +Y F
Sbjct: 117 AQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLAR--VIEDNEYTAREGAKF- 173
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSELLKQVQKRVVFP 135
+ +PE + +T +SD+WS G++L+ +V YG++P+ ++++ + + P
Sbjct: 174 -PIKWTAPEAINFGCFT-IKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMP 231
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 215 HSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAK 274
+S VA+K + + + FL E ++K L+H L+R + +YII EY
Sbjct: 36 NSTKVAVKTLKPGTMSV---QAFL-EEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMA 91
Query: 275 NGSLLEVIRKE 285
GSLL+ ++ +
Sbjct: 92 KGSLLDFLKSD 102
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 3 ILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSV 62
I ++ + ++ Q+ I + H ++HRD+K N+++ +K+ DFG AR
Sbjct: 119 IQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR---- 174
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS 122
T + + + Y +PE++ G+ Y + DIWS+GV++ M+ G + F T++
Sbjct: 175 --TAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGVIMGEMIKGGVLFPGTDHI 231
Query: 123 ELLKQVQKRVVFPESP----RLSSSCKALISN 150
+ +V +++ P SP +L + + + N
Sbjct: 232 DQWNKVIEQLGTP-SPEFMKKLQPTVRTYVEN 262
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 88/170 (51%), Gaps = 16/170 (9%)
Query: 9 TDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYK 68
T+ + QL +D+ H VVHRD+K +N+L+ IKL+DFG AR YS ++
Sbjct: 119 TETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS-----FQ 173
Query: 69 QNLSETFCGSYAYASPEILKGVPY-TPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLK 126
L+ + Y +PE+L Y TP D+WS+G + FA ++ R P F ++ + L
Sbjct: 174 MALTSVVVTLW-YRAPEVLLQSSYATP--VDLWSVGCI-FAEMFRRKPLFRGSSDVDQLG 229
Query: 127 QVQKRVVFP---ESPR-LSSSCKALISNILSPV-KFRIQMEDIRQDPWLK 171
++ + P + PR ++ +A S P+ KF ++++ +D LK
Sbjct: 230 KILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLK 279
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 64/126 (50%), Gaps = 14/126 (11%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR +TD + G
Sbjct: 153 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTD------DEMXG 201
Query: 78 SYA---YASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVF 134
A Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V
Sbjct: 202 XVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 261
Query: 135 PESPRL 140
P + L
Sbjct: 262 PGAELL 267
Score = 31.6 bits (70), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 53 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 111
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 112 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 158
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 88/170 (51%), Gaps = 16/170 (9%)
Query: 9 TDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYK 68
T+ + QL +D+ H VVHRD+K +N+L+ IKL+DFG AR YS ++
Sbjct: 119 TETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS-----FQ 173
Query: 69 QNLSETFCGSYAYASPEILKGVPY-TPQQSDIWSMGVVLFAMVYGRLP-FDDTNYSELLK 126
L+ + Y +PE+L Y TP D+WS+G + FA ++ R P F ++ + L
Sbjct: 174 MALTSVVVTLW-YRAPEVLLQSSYATP--VDLWSVGCI-FAEMFRRKPLFRGSSDVDQLG 229
Query: 127 QVQKRVVFP---ESPR-LSSSCKALISNILSPV-KFRIQMEDIRQDPWLK 171
++ + P + PR ++ +A S P+ KF ++++ +D LK
Sbjct: 230 KILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLK 279
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
QLA ++Y + +HRD+ N+L+ + +K++DFG AR +NN DY + +
Sbjct: 211 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTTNGRL- 267
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK 130
+ +PE L YT QSD+WS GV+++ + G P+ EL K +++
Sbjct: 268 PVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 320
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 241 EIEVVKGL-KHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKER 286
E+E++K + KH N+I L A +Y+I+EYA G+L E +R R
Sbjct: 136 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR 182
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 3 ILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSV 62
I ++ + ++ Q+ I + H ++HRD+K N+++ +K+ DFG AR
Sbjct: 119 IQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR---- 174
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS 122
T + + + Y +PE++ G+ Y + DIWS+GV++ M+ G + F T++
Sbjct: 175 --TAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGVIMGEMIKGGVLFPGTDHI 231
Query: 123 ELLKQVQKRVVFPESP----RLSSSCKALISN 150
+ +V +++ P SP +L + + + N
Sbjct: 232 DQWNKVIEQLGTP-SPEFMKKLQPTVRTYVEN 262
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 33/188 (17%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ ++ + +A+ H+ +VH D+K N L+ D +KL DFG A + + T +
Sbjct: 114 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSV---VK 169
Query: 73 ETFCGSYAYASPEILKGVPYTPQQS----------DIWSMGVVLFAMVYGRLPFDDTNYS 122
++ G+ Y PE +K + + + D+WS+G +L+ M YG+ PF
Sbjct: 170 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----Q 224
Query: 123 ELLKQVQK---------RVVFPESPR--LSSSCKALISNILSPVKFRIQMEDIRQDPWLK 171
+++ Q+ K + FP+ P L K + P K RI + ++ P+++
Sbjct: 225 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKR--DP-KQRISIPELLAHPYVQ 281
Query: 172 EDSNPVGK 179
++PV +
Sbjct: 282 IQTHPVNQ 289
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ D G AR T Y
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGY--------VA 184
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 138 PRL 140
L
Sbjct: 245 ELL 247
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 92 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 72/140 (51%), Gaps = 7/140 (5%)
Query: 3 ILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSV 62
I ++ + ++ Q+ I + H ++HRD+K N+++ +K+ DFG AR S
Sbjct: 117 IHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAST 176
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS 122
N + + + Y +PE++ G+ Y + DIWS+G ++ +V G + F T++
Sbjct: 177 N------FMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGELVKGSVIFQGTDHI 229
Query: 123 ELLKQVQKRVVFPESPRLSS 142
+ +V +++ P + +++
Sbjct: 230 DQWNKVIEQLGTPSAEFMAA 249
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A + Y + + +HRD++ N+L+ + K++DFG AR N +Q
Sbjct: 112 AQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPI- 170
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVY-GRLPFDDTNYSELLKQVQKRVVFP 135
+ +PE +T +SD+WS G++L +V GR+P+ N E+L+QV++ P
Sbjct: 171 ---KWTAPEAALYGRFT-IKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMP 226
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 12/116 (10%)
Query: 202 SSYATVKLATSARHSQDVAIKIIS-KVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAI 260
+ V + T +++ VAIK + +P +L+ E +++K LKH L++ L A+
Sbjct: 20 GQFGEVWMGTWNGNTK-VAIKTLKPGTMSPESFLE-----EAQIMKKLKHDKLVQ-LYAV 72
Query: 261 ETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNLSQTFSRCCYQDHI 316
+ +YI+ EY GSLL+ ++ E +AL + V +Q + Y + +
Sbjct: 73 VSEEPIYIVTEYMNKGSLLDFLKD----GEGRALKLPNLVDMAAQVAAGMAYIERM 124
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 33/188 (17%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ ++ + +A+ H+ +VH D+K N L+ D +KL DFG A + + T +
Sbjct: 110 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSV---VK 165
Query: 73 ETFCGSYAYASPEILKGVPYTPQQS----------DIWSMGVVLFAMVYGRLPFDDTNYS 122
++ G+ Y PE +K + + + D+WS+G +L+ M YG+ PF
Sbjct: 166 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----Q 220
Query: 123 ELLKQVQK---------RVVFPESPR--LSSSCKALISNILSPVKFRIQMEDIRQDPWLK 171
+++ Q+ K + FP+ P L K + P K RI + ++ P+++
Sbjct: 221 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKR--DP-KQRISIPELLAHPYVQ 277
Query: 172 EDSNPVGK 179
++PV +
Sbjct: 278 IQTHPVNQ 285
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 33/188 (17%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ ++ + +A+ H+ +VH D+K N L+ D +KL DFG A + + T +
Sbjct: 130 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSV---VK 185
Query: 73 ETFCGSYAYASPEILKGVPYTPQQS----------DIWSMGVVLFAMVYGRLPFDDTNYS 122
++ G+ Y PE +K + + + D+WS+G +L+ M YG+ PF
Sbjct: 186 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----Q 240
Query: 123 ELLKQVQK---------RVVFPESPR--LSSSCKALISNILSPVKFRIQMEDIRQDPWLK 171
+++ Q+ K + FP+ P L K + P K RI + ++ P+++
Sbjct: 241 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKR--DP-KQRISIPELLAHPYVQ 297
Query: 172 EDSNPVGK 179
++PV +
Sbjct: 298 IQTHPVNQ 305
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ D G AR T Y
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGY--------VA 184
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 138 PRL 140
L
Sbjct: 245 ELL 247
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 92 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
QLA ++Y + +HRD+ N+L+ + +K++DFG AR +NN DY + +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTTNGRL- 221
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK 130
+ +PE L YT QSD+WS GV+++ + G P+ EL K +++
Sbjct: 222 PVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 241 EIEVVKGL-KHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKER 286
E+E++K + KH N+I L A +Y+I+ YA G+L E +R R
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARR 136
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
QLA ++Y + +HRD+ N+L+ + +K++DFG AR +NN DY + +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTTNGRL- 221
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK 130
+ +PE L YT QSD+WS GV+++ + G P+ EL K +++
Sbjct: 222 PVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 241 EIEVVKGL-KHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKER 286
E+E++K + KH N+I L A +Y+I+EYA G+L E +R R
Sbjct: 90 EMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARR 136
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
QLA ++Y + +HRD+ N+L+ + +K++DFG AR +NN DY + +
Sbjct: 154 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTTNGRL- 210
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK 130
+ +PE L YT QSD+WS GV+++ + G P+ EL K +++
Sbjct: 211 PVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 263
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 241 EIEVVKGL-KHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKER 286
E+E++K + KH N+I L A +Y+I+EYA G+L E +R R
Sbjct: 79 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR 125
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
QLA ++Y + +HRD+ N+L+ + +K++DFG AR +NN DY + +
Sbjct: 152 QLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLAR--DINNIDYYKKTTNGRL- 208
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK 130
+ +PE L YT QSD+WS GV+++ + G P+ EL K +++
Sbjct: 209 PVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 261
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 241 EIEVVKGL-KHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKER 286
E+E++K + KH N+I L A +Y+I+EYA G+L E +R R
Sbjct: 77 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR 123
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
QLA ++Y + +HRD+ N+L+ + +K++DFG AR +NN DY + +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTTNGRL- 221
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK 130
+ +PE L YT QSD+WS GV+++ + G P+ EL K +++
Sbjct: 222 PVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 241 EIEVVKGL-KHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKER 286
E+E++K + KH N+I L A +Y+I+EYA G+L E +R R
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR 136
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
QLA ++Y + +HRD+ N+L+ + +K++DFG AR +NN DY + +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTTNGRL- 221
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK 130
+ +PE L YT QSD+WS GV+++ + G P+ EL K +++
Sbjct: 222 PVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 241 EIEVVKGL-KHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKER 286
E+E++K + KH N+I L A +Y+I+EYA G+L E +R R
Sbjct: 90 EMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARR 136
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
QLA ++Y + +HRD+ N+L+ + +K++DFG AR +NN DY + +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTTNGRL- 221
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK 130
+ +PE L YT QSD+WS GV+++ + G P+ EL K +++
Sbjct: 222 PVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 241 EIEVVKGL-KHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKER 286
E+E++K + KH N+I L A +Y+I+ YA G+L E +R R
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARR 136
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
+ Q+ + Y H +V+HRD+K NLLL+ ++K+ DFG AR ++ D+ L E
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DHTGFLXEX 191
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+ Y +PEI+ + DIWS+G +L M+ R F +Y + L +
Sbjct: 192 VATRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
+ Q+ + Y H +V+HRD+K NLLL+ ++K+ DFG AR ++ D+ L E
Sbjct: 134 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DHTGFLXEX 192
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+ Y +PEI+ + DIWS+G +L M+ R F +Y + L +
Sbjct: 193 VATRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 245
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 33/188 (17%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ ++ + +A+ H+ +VH D+K N L+ D +KL DFG A + + T +
Sbjct: 111 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSV---VK 166
Query: 73 ETFCGSYAYASPEILKGVPYTPQQS----------DIWSMGVVLFAMVYGRLPFDDTNYS 122
++ G+ Y PE +K + + + D+WS+G +L+ M YG+ PF
Sbjct: 167 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----Q 221
Query: 123 ELLKQVQK---------RVVFPESPR--LSSSCKALISNILSPVKFRIQMEDIRQDPWLK 171
+++ Q+ K + FP+ P L K + P K RI + ++ P+++
Sbjct: 222 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKR--DP-KQRISIPELLAHPYVQ 278
Query: 172 EDSNPVGK 179
++PV +
Sbjct: 279 IQTHPVNQ 286
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ D G AR T Y
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGY--------VA 184
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 138 PRL 140
L
Sbjct: 245 ELL 247
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 92 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
QLA ++Y + +HRD+ N+L+ + +K++DFG AR +NN DY + +
Sbjct: 157 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTTNGRL- 213
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK 130
+ +PE L YT QSD+WS GV+++ + G P+ EL K +++
Sbjct: 214 PVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 266
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 241 EIEVVKGL-KHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKER 286
E+E++K + KH N+I L A +Y+I+EYA G+L E +R R
Sbjct: 82 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR 128
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 8/99 (8%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q +D+ H +VHRD+K EN+L+ +KL+DFG AR YS Y+ L+
Sbjct: 128 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS-----YQMALTPVVVT 182
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF 116
+ Y +PE+L Y D+WS+G + FA ++ R P
Sbjct: 183 LW-YRAPEVLLQSTYA-TPVDMWSVGCI-FAEMFRRKPL 218
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 70/126 (55%), Gaps = 7/126 (5%)
Query: 19 LADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGS 78
+ + + Y + SV+HRD+ N L+ + IK+SDFG R V + Y + F
Sbjct: 112 VCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTR--FVLDDQYTSSTGTKF--P 167
Query: 79 YAYASPEILKGVPYTPQQSDIWSMGVVLFAMVY-GRLPFDDTNYSELLKQVQKRVVFPES 137
+ASPE+ Y+ +SD+WS GV+++ + G++P+++ + SE+++ + +
Sbjct: 168 VKWASPEVFSFSRYS-SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK- 225
Query: 138 PRLSSS 143
PRL+S+
Sbjct: 226 PRLAST 231
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 219 VAIKIISK-VQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGS 277
VAIK I + + D+++ E EV+ L HP L++ + ++ E+ ++G
Sbjct: 34 VAIKTIREGAMSEEDFIE-----EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGC 88
Query: 278 LLEVIRKERYIDEDKALL 295
L + +R +R + + LL
Sbjct: 89 LSDYLRTQRGLFAAETLL 106
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 33/188 (17%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ ++ + +A+ H+ +VH D+K N L+ D +KL DFG A + + T +
Sbjct: 158 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSV---VK 213
Query: 73 ETFCGSYAYASPEILKGVPYTPQQS----------DIWSMGVVLFAMVYGRLPFDDTNYS 122
++ G+ Y PE +K + + + D+WS+G +L+ M YG+ PF
Sbjct: 214 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----Q 268
Query: 123 ELLKQVQK---------RVVFPESPR--LSSSCKALISNILSPVKFRIQMEDIRQDPWLK 171
+++ Q+ K + FP+ P L K + P K RI + ++ P+++
Sbjct: 269 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKR--DP-KQRISIPELLAHPYVQ 325
Query: 172 EDSNPVGK 179
++PV +
Sbjct: 326 IQTHPVNQ 333
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 8/99 (8%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q +D+ H +VHRD+K EN+L+ +KL+DFG AR YS Y+ L+
Sbjct: 120 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS-----YQMALAPVVVT 174
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF 116
+ Y +PE+L Y D+WS+G + FA ++ R P
Sbjct: 175 LW-YRAPEVLLQSTYA-TPVDMWSVGCI-FAEMFRRKPL 210
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 13/121 (10%)
Query: 10 DKARRWFSQLADAIDYCHKKS--VVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDY 67
D + F Q A+ + H++ ++HRD+K ENLLL ++ IKL DFG A S + DY
Sbjct: 136 DTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTIS-HYPDY 194
Query: 68 -----KQNLSE---TFCGSYAYASPEILKGVPYTP--QQSDIWSMGVVLFAMVYGRLPFD 117
++ L E T + Y +PEI+ P ++ DIW++G +L+ + + + PF+
Sbjct: 195 SWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFE 254
Query: 118 D 118
D
Sbjct: 255 D 255
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 66/120 (55%), Gaps = 5/120 (4%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A ++Y VVH+D+ N+L+ DK N+K+SD G R+ V DY + L +
Sbjct: 152 AQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFRE--VYAADYYKLLGNSLL 209
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSELLKQVQKRVVFP 135
+ +PE + ++ SDIWS GVVL+ + YG P+ + ++++ ++ R V P
Sbjct: 210 -PIRWMAPEAIMYGKFS-IDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLP 267
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 213 ARHSQDVAIKIIS-KVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIME 271
+Q VAIK + K + P L++ E + L+HPN++ L + + +I
Sbjct: 53 GEQTQAVAIKTLKDKAEGP---LREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFS 109
Query: 272 YAKNGSLLEVI 282
Y +G L E +
Sbjct: 110 YCSHGDLHEFL 120
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 66/120 (55%), Gaps = 5/120 (4%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A ++Y VVH+D+ N+L+ DK N+K+SD G R+ V DY + L +
Sbjct: 135 AQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFRE--VYAADYYKLLGNSLL 192
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSELLKQVQKRVVFP 135
+ +PE + ++ SDIWS GVVL+ + YG P+ + ++++ ++ R V P
Sbjct: 193 -PIRWMAPEAIMYGKFS-IDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLP 250
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 213 ARHSQDVAIKII-SKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIME 271
+Q VAIK + K + P L++ E + L+HPN++ L + + +I
Sbjct: 36 GEQTQAVAIKTLKDKAEGP---LREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFS 92
Query: 272 YAKNGSLLEVI 282
Y +G L E +
Sbjct: 93 YCSHGDLHEFL 103
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 8/123 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DF AR T Y
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGY--------VA 184
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PEI+ + Q DIWS+G ++ ++ GR F T++ + LK + + V P +
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 138 PRL 140
L
Sbjct: 245 ELL 247
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFL---- 257
+Y +V A + VA+K +S+ I + K+ RE+ ++K +KH N+I L
Sbjct: 33 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 258 --QAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSEVSNL 303
+++E + VY++ + L +++ ++ D+ L Y + L
Sbjct: 92 PARSLEEFNDVYLVT-HLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
+ Q+ + Y H +V+HRD+K NLL++ ++K+ DFG AR + D+ L+E
Sbjct: 149 FLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEH-DHTGFLTEX 207
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+ Y +PEI+ + DIWS+G +L M+ R F +Y + L +
Sbjct: 208 VATRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 260
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 33/188 (17%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ ++ + +A+ H+ +VH D+K N L+ D +KL DFG A + + T +
Sbjct: 158 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSV---VK 213
Query: 73 ETFCGSYAYASPEILKGVPYTPQQS----------DIWSMGVVLFAMVYGRLPFDDTNYS 122
++ G+ Y PE +K + + + D+WS+G +L+ M YG+ PF
Sbjct: 214 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----Q 268
Query: 123 ELLKQVQK---------RVVFPESPR--LSSSCKALISNILSPVKFRIQMEDIRQDPWLK 171
+++ Q+ K + FP+ P L K + P K RI + ++ P+++
Sbjct: 269 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKR--DP-KQRISIPELLAHPYVQ 325
Query: 172 EDSNPVGK 179
++PV +
Sbjct: 326 IQTHPVNQ 333
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 33/188 (17%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ ++ + +A+ H+ +VH D+K N L+ D +KL DFG A + + T +
Sbjct: 158 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSV---VK 213
Query: 73 ETFCGSYAYASPEILKGVPYTPQQS----------DIWSMGVVLFAMVYGRLPFDDTNYS 122
++ G+ Y PE +K + + + D+WS+G +L+ M YG+ PF
Sbjct: 214 DSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----Q 268
Query: 123 ELLKQVQK---------RVVFPESPR--LSSSCKALISNILSPVKFRIQMEDIRQDPWLK 171
+++ Q+ K + FP+ P L K + P K RI + ++ P+++
Sbjct: 269 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKR--DP-KQRISIPELLAHPYVQ 325
Query: 172 EDSNPVGK 179
++PV +
Sbjct: 326 IQTHPVNQ 333
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 12/126 (9%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN-IKLSDFGFARKYSV 62
L DY+ R + ++ A+DYCH ++HRD+K N+L+D ++ ++L D+G A Y
Sbjct: 128 LTDYDI---RFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHP 184
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF--DDTN 120
+ S F G PE+L D+WS+G +L +M++ + PF N
Sbjct: 185 GQEYNVRVASRYFKG------PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 238
Query: 121 YSELLK 126
Y +L++
Sbjct: 239 YDQLVR 244
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A + Y + + VHRD++ N+L+ + K++DFG AR + + +Y F
Sbjct: 121 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKF- 177
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVY-GRLPFDDTNYSELLKQVQKRVVFP 135
+ +PE +T +SD+WS G++L + GR+P+ E+L QV++ P
Sbjct: 178 -PIKWTAPEAALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 235
Query: 136 ESPRLSSSCKALI 148
P S L+
Sbjct: 236 CPPECPESLHDLM 248
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 219 VAIKIIS-KVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGS 277
VAIK + +P +L+ E +V+K L+H L++ L A+ + +YI+MEY G
Sbjct: 45 VAIKTLKPGTMSPEAFLQ-----EAQVMKKLRHEKLVQ-LYAVVSEEPIYIVMEYMSKGC 98
Query: 278 LLEVIRKE 285
LL+ ++ E
Sbjct: 99 LLDFLKGE 106
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A + Y + + VHRD++ N+L+ + K++DFG AR + + +Y F
Sbjct: 121 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKF- 177
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVY-GRLPFDDTNYSELLKQVQKRVVFP 135
+ +PE +T +SD+WS G++L + GR+P+ E+L QV++ P
Sbjct: 178 -PIKWTAPEAALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 235
Query: 136 ESPRLSSSCKALI 148
P S L+
Sbjct: 236 CPPECPESLHDLM 248
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 219 VAIKIIS-KVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGS 277
VAIK + +P +L+ E +V+K L+H L++ L A+ + +YI+ EY GS
Sbjct: 45 VAIKTLKPGTMSPEAFLQ-----EAQVMKKLRHEKLVQ-LYAVVSEEPIYIVTEYMSKGS 98
Query: 278 LLEVIRKE 285
LL+ ++ E
Sbjct: 99 LLDFLKGE 106
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A + Y + + VHRD++ N+L+ + K++DFG AR + + +Y F
Sbjct: 121 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKF- 177
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVY-GRLPFDDTNYSELLKQVQKRVVFP 135
+ +PE +T +SD+WS G++L + GR+P+ E+L QV++ P
Sbjct: 178 -PIKWTAPEAALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 235
Query: 136 ESPRLSSSCKALI 148
P S L+
Sbjct: 236 CPPECPESLHDLM 248
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 219 VAIKIIS-KVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGS 277
VAIK + +P +L+ E +V+K L+H L++ L A+ + +YI+ EY G
Sbjct: 45 VAIKTLKPGTMSPEAFLQ-----EAQVMKKLRHEKLVQ-LYAVVSEEPIYIVTEYMSKGC 98
Query: 278 LLEVIRKE 285
LL+ ++ E
Sbjct: 99 LLDFLKGE 106
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A + Y + + VHRD++ N+L+ + K++DFG AR + + +Y F
Sbjct: 118 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKF- 174
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVY-GRLPFDDTNYSELLKQVQKRVVFP 135
+ +PE +T +SD+WS G++L + GR+P+ E+L QV++ P
Sbjct: 175 -PIKWTAPEAALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 232
Query: 136 ESPRLSSSCKALI 148
P S L+
Sbjct: 233 CPPECPESLHDLM 245
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 219 VAIKIIS-KVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGS 277
VAIK + +P +L+ E +V+K L+H L++ L A+ + +YI+ EY GS
Sbjct: 42 VAIKTLKPGTMSPEAFLQ-----EAQVMKKLRHEKLVQ-LYAVVSEEPIYIVTEYMNKGS 95
Query: 278 LLEVIRKE 285
LL+ ++ E
Sbjct: 96 LLDFLKGE 103
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A + Y + + VHRD++ N+L+ + K++DFG AR + + +Y F
Sbjct: 121 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKF- 177
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVY-GRLPFDDTNYSELLKQVQKRVVFP 135
+ +PE +T +SD+WS G++L + GR+P+ E+L QV++ P
Sbjct: 178 -PIKWTAPEAALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 235
Query: 136 ESPRLSSSCKALI 148
P S L+
Sbjct: 236 CPPECPESLHDLM 248
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 219 VAIKIIS-KVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGS 277
VAIK + +P +L+ E +V+K L+H L++ L A+ + +YI+ EY GS
Sbjct: 45 VAIKTLKPGTMSPEAFLQ-----EAQVMKKLRHEKLVQ-LYAVVSEEPIYIVCEYMSKGS 98
Query: 278 LLEVIRKE 285
LL+ ++ E
Sbjct: 99 LLDFLKGE 106
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A + Y + + VHRD++ N+L+ + K++DFG AR + + +Y F
Sbjct: 121 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKF- 177
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVY-GRLPFDDTNYSELLKQVQKRVVFP 135
+ +PE +T +SD+WS G++L + GR+P+ E+L QV++ P
Sbjct: 178 -PIKWTAPEAALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 235
Query: 136 ESPRLSSSCKALI 148
P S L+
Sbjct: 236 CPPECPESLHDLM 248
Score = 34.7 bits (78), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 219 VAIKIIS-KVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGS 277
VAIK + +P +L+ E +V+K ++H L++ L A+ + +YI+ EY GS
Sbjct: 45 VAIKTLKPGTMSPEAFLQ-----EAQVMKKIRHEKLVQ-LYAVVSEEPIYIVTEYMSKGS 98
Query: 278 LLEVIRKE 285
LL+ ++ E
Sbjct: 99 LLDFLKGE 106
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A + Y + + VHRD++ N+L+ + K++DFG AR + + +Y F
Sbjct: 121 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKF- 177
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVY-GRLPFDDTNYSELLKQVQKRVVFP 135
+ +PE +T +SD+WS G++L + GR+P+ E+L QV++ P
Sbjct: 178 -PIKWTAPEAALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 235
Query: 136 ESPRLSSSCKALI 148
P S L+
Sbjct: 236 CPPECPESLHDLM 248
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 219 VAIKIIS-KVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGS 277
VAIK + +P +L+ E +V+K L+H L++ L A+ + +YI++EY GS
Sbjct: 45 VAIKTLKPGTMSPEAFLQ-----EAQVMKKLRHEKLVQ-LYAVVSEEPIYIVIEYMSKGS 98
Query: 278 LLEVIRKE 285
LL+ ++ E
Sbjct: 99 LLDFLKGE 106
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A + Y + + VHRD++ N+L+ + K++DFG AR + + +Y F
Sbjct: 114 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKF- 170
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVY-GRLPFDDTNYSELLKQVQKRVVFP 135
+ +PE +T +SD+WS G++L + GR+P+ E+L QV++ P
Sbjct: 171 -PIKWTAPEAALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 228
Query: 136 ESPRLSSSCKALI 148
P S L+
Sbjct: 229 CPPECPESLHDLM 241
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 219 VAIKIIS-KVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGS 277
VAIK + +P +L+ E +V+K L+H L++ L A+ + +YI+ EY GS
Sbjct: 38 VAIKTLKPGTMSPEAFLQ-----EAQVMKKLRHEKLVQ-LYAVVSEEPIYIVTEYMSKGS 91
Query: 278 LLEVIRKE 285
LL+ ++ E
Sbjct: 92 LLDFLKGE 99
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A + Y + + VHRD++ N+L+ + K++DFG AR + + +Y F
Sbjct: 110 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKF- 166
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVY-GRLPFDDTNYSELLKQVQKRVVFP 135
+ +PE +T +SD+WS G++L + GR+P+ E+L QV++ P
Sbjct: 167 -PIKWTAPEAALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 224
Query: 136 ESPRLSSSCKALI 148
P S L+
Sbjct: 225 CPPECPESLHDLM 237
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 219 VAIKIIS-KVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGS 277
VAIK + +P +L+ E +V+K L+H L++ L A+ + +YI+ EY GS
Sbjct: 34 VAIKTLKPGTMSPEAFLQ-----EAQVMKKLRHEKLVQ-LYAVVSEEPIYIVTEYMSKGS 87
Query: 278 LLEVIRKE 285
LL+ ++ E
Sbjct: 88 LLDFLKGE 95
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A + Y + + VHRD++ N+L+ + K++DFG AR + + +Y F
Sbjct: 112 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKF- 168
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVY-GRLPFDDTNYSELLKQVQKRVVFP 135
+ +PE +T +SD+WS G++L + GR+P+ E+L QV++ P
Sbjct: 169 -PIKWTAPEAALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 226
Query: 136 ESPRLSSSCKALI 148
P S L+
Sbjct: 227 CPPECPESLHDLM 239
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 219 VAIKIIS-KVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGS 277
VAIK + +P +L+ E +V+K L+H L++ L A+ + +YI+ EY GS
Sbjct: 36 VAIKTLKPGTMSPEAFLQ-----EAQVMKKLRHEKLVQ-LYAVVSEEPIYIVTEYMSKGS 89
Query: 278 LLEVIRKE 285
LL+ ++ E
Sbjct: 90 LLDFLKGE 97
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
QLA ++Y + +HRD+ N+L+ + ++++DFG AR +NN DY + +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLAR--DINNIDYYKKTTNGRL- 221
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK 130
+ +PE L YT QSD+WS GV+++ + G P+ EL K +++
Sbjct: 222 PVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 241 EIEVVKGL-KHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKER 286
E+E++K + KH N+I L A +Y+I+EYA G+L E +R R
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR 136
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLS 72
+ ++ + +A+ H+ +VH D+K N L+ D +KL DFG A + D +
Sbjct: 130 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQ---PDXXXVVK 185
Query: 73 ETFCGSYAYASPEILKGVPYTPQQS----------DIWSMGVVLFAMVYGRLPFDDTNYS 122
++ G+ Y PE +K + + + D+WS+G +L+ M YG+ PF
Sbjct: 186 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----Q 240
Query: 123 ELLKQVQK---------RVVFPESPR--LSSSCKALISNILSPVKFRIQMEDIRQDPWLK 171
+++ Q+ K + FP+ P L K + P K RI + ++ P+++
Sbjct: 241 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKR--DP-KQRISIPELLAHPYVQ 297
Query: 172 EDSNPVGK 179
++PV +
Sbjct: 298 IQTHPVNQ 305
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 6/133 (4%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A + Y + + VHRD++ N+L+ + K++DFG AR N +Q
Sbjct: 111 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPI- 169
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVY-GRLPFDDTNYSELLKQVQKRVVFP 135
+ +PE +T +SD+WS G++L + GR+P+ E+L QV++ P
Sbjct: 170 ---KWTAPEAALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 225
Query: 136 ESPRLSSSCKALI 148
P S L+
Sbjct: 226 CPPECPESLHDLM 238
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 219 VAIKIIS-KVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGS 277
VAIK + +P +L+ E +V+K L+H L++ L A+ + + I+ EY GS
Sbjct: 35 VAIKTLKPGTMSPEAFLQ-----EAQVMKKLRHEKLVQ-LYAVVSEEPIXIVTEYMSKGS 88
Query: 278 LLEVIRKE 285
LL+ ++ E
Sbjct: 89 LLDFLKGE 96
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 67/120 (55%), Gaps = 6/120 (5%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A+ + Y +K+ +HRD++ N+L+ + K++DFG AR + + +Y F
Sbjct: 116 AQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLAR--VIEDNEYTAREGAKF- 172
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSELLKQVQKRVVFP 135
+ +PE + +T +S++WS G++L+ +V YG++P+ ++++ + + P
Sbjct: 173 -PIKWTAPEAINFGCFT-IKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMP 230
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 215 HSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAK 274
+S VA+K + + + FL E ++K L+H L+R + +YII E+
Sbjct: 35 NSTKVAVKTLKPGTMSV---QAFL-EEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMA 90
Query: 275 NGSLLEVIRKE 285
GSLL+ ++ +
Sbjct: 91 KGSLLDFLKSD 101
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 6/133 (4%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A + Y + + VHRD++ N+L+ + K++DFG AR N +Q
Sbjct: 121 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPI- 179
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVY-GRLPFDDTNYSELLKQVQKRVVFP 135
+ +PE +T +SD+WS G++L + GR+P+ E+L QV++ P
Sbjct: 180 ---KWTAPEAALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 235
Query: 136 ESPRLSSSCKALI 148
P S L+
Sbjct: 236 CPPECPESLHDLM 248
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 219 VAIKIIS-KVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGS 277
VAIK + +P +L+ E +V+K L+H L++ L A+ + +YI++EY GS
Sbjct: 45 VAIKTLKPGTMSPEAFLQ-----EAQVMKKLRHEKLVQ-LYAVVSEEPIYIVIEYMSKGS 98
Query: 278 LLEVIRKE 285
LL+ ++ E
Sbjct: 99 LLDFLKGE 106
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 81/195 (41%), Gaps = 48/195 (24%)
Query: 7 YNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN---IKLSDFGFARKYSVN 63
+ +A + +AI Y H ++ HRD+K ENLL K +KL+DFGFA++ +
Sbjct: 114 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGE 173
Query: 64 NTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
D + D+WS+GV+++ ++ G PF +
Sbjct: 174 KYD----------------------------KSCDMWSLGVIMYILLCGYPPFYSNHGLA 205
Query: 124 LLKQVQKRVVF-------PESPRLSSSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDS 174
+ ++ R+ PE +S K LI N+L P + R+ + + PW+ +
Sbjct: 206 ISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQ-RMTITEFMNHPWIMQ-- 262
Query: 175 NPVGKSKSAPEVGIH 189
S P+ +H
Sbjct: 263 -----STKVPQTPLH 272
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 12/126 (9%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKY-NIKLSDFGFARKYSV 62
L DY+ R + ++ A+DYCH ++HRD+K N+++D ++ ++L D+G A Y
Sbjct: 128 LTDYDI---RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF--DDTN 120
+ S F G PE+L D+WS+G +L +M++ + PF N
Sbjct: 185 GQEYNVRVASRYFKG------PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 238
Query: 121 YSELLK 126
Y +L++
Sbjct: 239 YDQLVR 244
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q +D+ H +VHRD+K EN+L+ +KL+DFG AR YS Y+ L
Sbjct: 120 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS-----YQMALDPVVVT 174
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF 116
+ Y +PE+L Y D+WS+G + FA ++ R P
Sbjct: 175 LW-YRAPEVLLQSTYA-TPVDMWSVGCI-FAEMFRRKPL 210
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 19 LADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGS 78
+A + Y + S VHRD+ N+L++ K+SDFG +R N++D + S
Sbjct: 127 IASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIP 186
Query: 79 YAYASPEILKGVPYTPQQSDIWSMGVVLF-AMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ +PE + +T SD WS G+V++ M +G P+ D + +++ +++ P
Sbjct: 187 IRWTAPEAIAFRKFT-SASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPP 245
Query: 138 PRLSSSCKALI 148
P +S L+
Sbjct: 246 PDCPTSLHQLM 256
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 235 KKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIR 283
++FL E ++ +HPN+IR + + V I+ E+ +NG+L +R
Sbjct: 62 REFL-SEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLR 109
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A + Y + + VHRD++ N+L+ + K++DFG AR + + +Y F
Sbjct: 287 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKF- 343
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVY-GRLPFDDTNYSELLKQVQKRVVFP 135
+ +PE +T +SD+WS G++L + GR+P+ E+L QV++ P
Sbjct: 344 -PIKWTAPEAALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 401
Query: 136 ESPRLSSSCKALI 148
P S L+
Sbjct: 402 CPPECPESLHDLM 414
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 219 VAIKIIS-KVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGS 277
VAIK + +P +L+ E +V+K L+H L++ L A+ + +YI+ EY GS
Sbjct: 211 VAIKTLKPGTMSPEAFLQ-----EAQVMKKLRHEKLVQ-LYAVVSEEPIYIVTEYMSKGS 264
Query: 278 LLEVIRKE 285
LL+ ++ E
Sbjct: 265 LLDFLKGE 272
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A + Y + + VHRD++ N+L+ + K++DFG AR + + +Y F
Sbjct: 287 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKF- 343
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVY-GRLPFDDTNYSELLKQVQKRVVFP 135
+ +PE +T +SD+WS G++L + GR+P+ E+L QV++ P
Sbjct: 344 -PIKWTAPEAALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 401
Query: 136 ESPRLSSSCKALI 148
P S L+
Sbjct: 402 CPPECPESLHDLM 414
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 219 VAIKIIS-KVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGS 277
VAIK + +P +L+ E +V+K L+H L++ L A+ + +YI+ EY GS
Sbjct: 211 VAIKTLKPGTMSPEAFLQ-----EAQVMKKLRHEKLVQ-LYAVVSEEPIYIVGEYMSKGS 264
Query: 278 LLEVIRKE 285
LL+ ++ E
Sbjct: 265 LLDFLKGE 272
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A + Y + + VHRD++ N+L+ + K++DFG AR + + +Y F
Sbjct: 287 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKF- 343
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVY-GRLPFDDTNYSELLKQVQKRVVFP 135
+ +PE +T +SD+WS G++L + GR+P+ E+L QV++ P
Sbjct: 344 -PIKWTAPEAALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 401
Query: 136 ESPRLSSSCKALI 148
P S L+
Sbjct: 402 CPPECPESLHDLM 414
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 219 VAIKIIS-KVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGS 277
VAIK + +P +L+ E +V+K L+H L++ L A+ + +YI+ EY GS
Sbjct: 211 VAIKTLKPGTMSPEAFLQ-----EAQVMKKLRHEKLVQ-LYAVVSEEPIYIVTEYMSKGS 264
Query: 278 LLEVIRKE 285
LL+ ++ E
Sbjct: 265 LLDFLKGE 272
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 21 DAIDYCH-KKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGSY 79
++ Y H +K++ HRD+K N+L+D +KLSDFG +Y V D K S G+Y
Sbjct: 162 NSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFG-ESEYMV---DKKIKGSR---GTY 214
Query: 80 AYASPEILKG-VPYTPQQSDIWSMGVVLFAMVYGRLPF 116
+ PE Y + DIWS+G+ L+ M Y +PF
Sbjct: 215 EFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPF 252
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 12/126 (9%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN-IKLSDFGFARKYSV 62
L DY+ R + ++ A+DYCH ++HRD+K N+++D ++ ++L D+G A Y
Sbjct: 128 LTDYDI---RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF--DDTN 120
+ S F G PE+L D+WS+G +L +M++ + PF N
Sbjct: 185 GQEYNVRVASRYFKG------PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 238
Query: 121 YSELLK 126
Y +L++
Sbjct: 239 YDQLVR 244
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 17/111 (15%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARK------YSVNN-TDYKQN 70
Q+A + Y K VHRD+ N +LD+K+ +K++DFG AR YSV+N T K
Sbjct: 160 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 219
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTN 120
+ + + E L+ +T +SD+WS GV+L+ M G P+ D N
Sbjct: 220 VK--------WMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVN 261
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 12/126 (9%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN-IKLSDFGFARKYSV 62
L DY+ R + ++ A+DYCH ++HRD+K N+++D ++ ++L D+G A Y
Sbjct: 128 LTDYDI---RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF--DDTN 120
+ S F G PE+L D+WS+G +L +M++ + PF N
Sbjct: 185 GQEYNVRVASRYFKG------PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 238
Query: 121 YSELLK 126
Y +L++
Sbjct: 239 YDQLVR 244
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 17/111 (15%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARK------YSVNN-TDYKQN 70
Q+A + Y K VHRD+ N +LD+K+ +K++DFG AR YSV+N T K
Sbjct: 141 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 200
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTN 120
+ + + E L+ +T +SD+WS GV+L+ M G P+ D N
Sbjct: 201 VK--------WMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVN 242
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 12/126 (9%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKY-NIKLSDFGFARKYSV 62
L DY+ R + ++ A+DYCH ++HRD+K N+++D ++ ++L D+G A Y
Sbjct: 128 LTDYDI---RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF--DDTN 120
+ S F G PE+L D+WS+G +L +M++ + PF N
Sbjct: 185 GQEYNVRVASRYFKG------PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 238
Query: 121 YSELLK 126
Y +L++
Sbjct: 239 YDQLVR 244
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 17/111 (15%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARK------YSVNN-TDYKQN 70
Q+A + Y K VHRD+ N +LD+K+ +K++DFG AR YSV+N T K
Sbjct: 133 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 192
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTN 120
+ + + E L+ +T +SD+WS GV+L+ M G P+ D N
Sbjct: 193 VK--------WMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVN 234
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 17/111 (15%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARK------YSVNN-TDYKQN 70
Q+A + Y K VHRD+ N +LD+K+ +K++DFG AR YSV+N T K
Sbjct: 139 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 198
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTN 120
+ + + E L+ +T +SD+WS GV+L+ M G P+ D N
Sbjct: 199 VK--------WMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVN 240
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 12/126 (9%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKY-NIKLSDFGFARKYSV 62
L DY+ R + ++ A+DYCH ++HRD+K N+++D ++ ++L D+G A Y
Sbjct: 128 LTDYDI---RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF--DDTN 120
+ S F G PE+L D+WS+G +L +M++ + PF N
Sbjct: 185 GQEYNVRVASRYFKG------PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 238
Query: 121 YSELLK 126
Y +L++
Sbjct: 239 YDQLVR 244
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 12/126 (9%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN-IKLSDFGFARKYSV 62
L DY+ R + ++ A+DYCH ++HRD+K N+++D ++ ++L D+G A Y
Sbjct: 128 LTDYDI---RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF--DDTN 120
+ S F G PE+L D+WS+G +L +M++ + PF N
Sbjct: 185 GQEYNVRVASRYFKG------PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 238
Query: 121 YSELLK 126
Y +L++
Sbjct: 239 YDQLVR 244
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 17/111 (15%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARK------YSVNN-TDYKQN 70
Q+A + Y K VHRD+ N +LD+K+ +K++DFG AR YSV+N T K
Sbjct: 138 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 197
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTN 120
+ + + E L+ +T +SD+WS GV+L+ M G P+ D N
Sbjct: 198 VK--------WMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVN 239
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 55/97 (56%), Gaps = 6/97 (6%)
Query: 22 AIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGSYAY 81
++Y H +HRDIK N+LL+ + + KL+DFG A + + + K+N G+ +
Sbjct: 137 GLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQ--LTDXMAKRN---XVIGTPFW 191
Query: 82 ASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDD 118
+PE+++ + Y +DIWS+G+ M G+ P+ D
Sbjct: 192 MAPEVIQEIGYN-CVADIWSLGITAIEMAEGKPPYAD 227
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 59/116 (50%), Gaps = 8/116 (6%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
SY +V A Q VAIK Q P++ + + +EI +++ P+++++ +
Sbjct: 40 GSYGSVYKAIHKETGQIVAIK-----QVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 262 TTHRVYIIMEYAKNGSLLEVIR-KERYIDEDK-ALLCYSEVSNLSQT-FSRCCYQD 314
++I+MEY GS+ ++IR + + + ED+ A + S + L F R ++D
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRD 150
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 17/111 (15%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARK------YSVNN-TDYKQN 70
Q+A + Y K VHRD+ N +LD+K+ +K++DFG AR YSV+N T K
Sbjct: 141 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 200
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTN 120
+ + + E L+ +T +SD+WS GV+L+ M G P+ D N
Sbjct: 201 VK--------WMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVN 242
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 17/111 (15%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARK------YSVNN-TDYKQN 70
Q+A + Y K VHRD+ N +LD+K+ +K++DFG AR YSV+N T K
Sbjct: 159 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 218
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTN 120
+ + + E L+ +T +SD+WS GV+L+ M G P+ D N
Sbjct: 219 VK--------WMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVN 260
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 12/126 (9%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKY-NIKLSDFGFARKYSV 62
L DY+ R + ++ A+DYCH ++HRD+K N+++D ++ ++L D+G A Y
Sbjct: 128 LTDYDI---RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF--DDTN 120
+ S F G PE+L D+WS+G +L +M++ + PF N
Sbjct: 185 GQEYNVRVASRYFKG------PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 238
Query: 121 YSELLK 126
Y +L++
Sbjct: 239 YDQLVR 244
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 17/111 (15%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARK------YSVNN-TDYKQN 70
Q+A + Y K VHRD+ N +LD+K+ +K++DFG AR YSV+N T K
Sbjct: 136 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 195
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTN 120
+ + + E L+ +T +SD+WS GV+L+ M G P+ D N
Sbjct: 196 VK--------WMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVN 237
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 12/126 (9%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKY-NIKLSDFGFARKYSV 62
L DY+ R + ++ A+DYCH ++HRD+K N+++D ++ ++L D+G A Y
Sbjct: 128 LTDYDI---RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF--DDTN 120
+ S F G PE+L D+WS+G +L +M++ + PF N
Sbjct: 185 GQEYNVRVASRYFKG------PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 238
Query: 121 YSELLK 126
Y +L++
Sbjct: 239 YDQLVR 244
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 6/133 (4%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A + Y + + VHRD++ N+L+ + K++DFG AR N +Q
Sbjct: 118 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPI- 176
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVY-GRLPFDDTNYSELLKQVQKRVVFP 135
+ +PE +T +SD+WS G++L + GR+P+ E+L QV++ P
Sbjct: 177 ---KWTAPEAALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 232
Query: 136 ESPRLSSSCKALI 148
P S L+
Sbjct: 233 CPPECPESLHDLM 245
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 219 VAIKIIS-KVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGS 277
VAIK + +P +L+ E +V+K L+H L++ L A+ + +YI+ EY GS
Sbjct: 42 VAIKTLKPGTMSPEAFLQ-----EAQVMKKLRHEKLVQ-LYAVVSEEPIYIVTEYMNKGS 95
Query: 278 LLEVIRKE 285
LL+ ++ E
Sbjct: 96 LLDFLKGE 103
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 12/126 (9%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN-IKLSDFGFARKYSV 62
L DY+ R + ++ A+DYCH ++HRD+K N+++D ++ ++L D+G A Y
Sbjct: 128 LTDYDI---RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF--DDTN 120
+ S F G PE+L D+WS+G +L +M++ + PF N
Sbjct: 185 GQEYNVRVASRYFKG------PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 238
Query: 121 YSELLK 126
Y +L++
Sbjct: 239 YDQLVR 244
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 17/111 (15%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARK------YSVNN-TDYKQN 70
Q+A + Y K VHRD+ N +LD+K+ +K++DFG AR YSV+N T K
Sbjct: 140 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 199
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTN 120
+ + + E L+ +T +SD+WS GV+L+ M G P+ D N
Sbjct: 200 VK--------WMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVN 241
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 12/126 (9%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKY-NIKLSDFGFARKYSV 62
L DY+ R + ++ A+DYCH ++HRD+K N+++D ++ ++L D+G A Y
Sbjct: 128 LTDYDI---RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF--DDTN 120
+ S F G PE+L D+WS+G +L +M++ + PF N
Sbjct: 185 GQEYNVRVASRYFKG------PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 238
Query: 121 YSELLK 126
Y +L++
Sbjct: 239 YDQLVR 244
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 12/126 (9%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN-IKLSDFGFARKYSV 62
L DY+ R + ++ A+DYCH ++HRD+K N+++D ++ ++L D+G A Y
Sbjct: 127 LTDYDI---RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 183
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF--DDTN 120
+ S F G PE+L D+WS+G +L +M++ + PF N
Sbjct: 184 GQEYNVRVASRYFKG------PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 237
Query: 121 YSELLK 126
Y +L++
Sbjct: 238 YDQLVR 243
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 12/126 (9%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN-IKLSDFGFARKYSV 62
L DY+ R + ++ A+DYCH ++HRD+K N+++D ++ ++L D+G A Y
Sbjct: 127 LTDYDI---RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 183
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF--DDTN 120
+ S F G PE+L D+WS+G +L +M++ + PF N
Sbjct: 184 GQEYNVRVASRYFKG------PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 237
Query: 121 YSELLK 126
Y +L++
Sbjct: 238 YDQLVR 243
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 21/173 (12%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFGFARKYSVNNTDYKQNLSE 73
+ QL ++ Y H + HRDIK +NLLLD D +KL DFG A++ + N+S
Sbjct: 139 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG----EPNVS- 193
Query: 74 TFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVV 133
C Y Y +PE++ G D+WS G VL ++ G+ F + + L ++ K +
Sbjct: 194 XICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLG 252
Query: 134 FPESPRLSSSCKALISNILSPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
P ++ ++P + I+ PW K V + ++ PE
Sbjct: 253 TPTREQIRE---------MNPNYTEFKFPQIKAHPWTK-----VFRPRTPPEA 291
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 12/126 (9%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKY-NIKLSDFGFARKYSV 62
L DY+ R + ++ A+DYCH ++HRD+K N+++D ++ ++L D+G A Y
Sbjct: 133 LTDYDI---RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 189
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF--DDTN 120
+ S F G PE+L D+WS+G +L +M++ + PF N
Sbjct: 190 GQEYNVRVASRYFKG------PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 243
Query: 121 YSELLK 126
Y +L++
Sbjct: 244 YDQLVR 249
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 75/152 (49%), Gaps = 12/152 (7%)
Query: 3 ILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSV 62
I ++ + ++ Q+ I + H ++HRD+K N+++ +K+ DFG AR
Sbjct: 119 IQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR---- 174
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS 122
T + + + Y +PE++ G+ Y + DIWS+G ++ M+ G + F T++
Sbjct: 175 --TAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
Query: 123 ELLKQVQKRVVFPESP----RLSSSCKALISN 150
+ +V +++ P SP +L + + + N
Sbjct: 232 DQWNKVIEQLGTP-SPEFMKKLQPTVRTYVEN 262
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 21/172 (12%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFGFARKYSVNNTDYKQNLSE 73
+ QL ++ Y H + HRDIK +NLLLD D +KL DFG A++ + N+S
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG----EPNVS- 181
Query: 74 TFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVV 133
C Y Y +PE++ G D+WS G VL ++ G+ F + + L ++ K +
Sbjct: 182 XICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLG 240
Query: 134 FPESPRLSSSCKALISNILSPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPE 185
P ++ ++P + I+ PW K V + ++ PE
Sbjct: 241 TPTREQIRE---------MNPNYTEFKFPQIKAHPWTK-----VFRPRTPPE 278
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 12/126 (9%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN-IKLSDFGFARKYSV 62
L DY+ R + ++ A+DYCH ++HRD+K N+++D ++ ++L D+G A Y
Sbjct: 126 LTDYDI---RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 182
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF--DDTN 120
+ S F G PE+L D+WS+G +L +M++ + PF N
Sbjct: 183 GQEYNVRVASRYFKG------PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 236
Query: 121 YSELLK 126
Y +L++
Sbjct: 237 YDQLVR 242
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 21/173 (12%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFGFARKYSVNNTDYKQNLSE 73
+ QL ++ Y H + HRDIK +NLLLD D +KL DFG A++ + N+S
Sbjct: 135 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG----EPNVS- 189
Query: 74 TFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVV 133
C Y Y +PE++ G D+WS G VL ++ G+ F + + L ++ K +
Sbjct: 190 XICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLG 248
Query: 134 FPESPRLSSSCKALISNILSPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
P ++ ++P + I+ PW K V + ++ PE
Sbjct: 249 TPTREQIRE---------MNPNYTEFKFPQIKAHPWTK-----VFRPRTPPEA 287
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 21/172 (12%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFGFARKYSVNNTDYKQNLSE 73
+ QL ++ Y H + HRDIK +NLLLD D +KL DFG A++ + N+S
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG----EPNVS- 181
Query: 74 TFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVV 133
C Y Y +PE++ G D+WS G VL ++ G+ F + + L ++ K +
Sbjct: 182 XICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLG 240
Query: 134 FPESPRLSSSCKALISNILSPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPE 185
P ++ ++P + I+ PW K V + ++ PE
Sbjct: 241 TPTREQIRE---------MNPNYTEFKFPQIKAHPWTK-----VFRPRTPPE 278
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q +D+ H +VHRD+K EN+L+ +KL+DFG AR YS Y+ L
Sbjct: 120 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS-----YQMALFPVVVT 174
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF 116
+ Y +PE+L Y D+WS+G + FA ++ R P
Sbjct: 175 LW-YRAPEVLLQSTYA-TPVDMWSVGCI-FAEMFRRKPL 210
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 69/126 (54%), Gaps = 7/126 (5%)
Query: 19 LADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGS 78
+ + + Y + V+HRD+ N L+ + IK+SDFG R V + Y + F
Sbjct: 110 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR--FVLDDQYTSSTGTKF--P 165
Query: 79 YAYASPEILKGVPYTPQQSDIWSMGVVLFAMVY-GRLPFDDTNYSELLKQVQKRVVFPES 137
+ASPE+ Y+ +SD+WS GV+++ + G++P+++ + SE+++ + +
Sbjct: 166 VKWASPEVFSFSRYS-SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK- 223
Query: 138 PRLSSS 143
PRL+S+
Sbjct: 224 PRLAST 229
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 219 VAIKIISK-VQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGS 277
VAIK I + + D+++ E EV+ L HP L++ + ++ E+ ++G
Sbjct: 32 VAIKTIREGAMSEEDFIE-----EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGC 86
Query: 278 LLEVIRKERYIDEDKALL 295
L + +R +R + + LL
Sbjct: 87 LSDYLRTQRGLFAAETLL 104
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 69/126 (54%), Gaps = 7/126 (5%)
Query: 19 LADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGS 78
+ + + Y + V+HRD+ N L+ + IK+SDFG R V + Y + F
Sbjct: 113 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR--FVLDDQYTSSTGTKF--P 168
Query: 79 YAYASPEILKGVPYTPQQSDIWSMGVVLFAMVY-GRLPFDDTNYSELLKQVQKRVVFPES 137
+ASPE+ Y+ +SD+WS GV+++ + G++P+++ + SE+++ + +
Sbjct: 169 VKWASPEVFSFSRYS-SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK- 226
Query: 138 PRLSSS 143
PRL+S+
Sbjct: 227 PRLAST 232
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 219 VAIKIISK-VQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGS 277
VAIK I + + D+++ E EV+ L HP L++ + ++ E+ ++G
Sbjct: 35 VAIKTIREGAMSEEDFIE-----EAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGC 89
Query: 278 LLEVIRKERYIDEDKALL 295
L + +R +R + + LL
Sbjct: 90 LSDYLRTQRGLFAAETLL 107
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 21/172 (12%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFGFARKYSVNNTDYKQNLSE 73
+ QL ++ Y H + HRDIK +NLLLD D +KL DFG A++ + N+S
Sbjct: 128 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG----EPNVS- 182
Query: 74 TFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVV 133
C Y Y +PE++ G D+WS G VL ++ G+ F + + L ++ K +
Sbjct: 183 XICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLG 241
Query: 134 FPESPRLSSSCKALISNILSPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPE 185
P ++ ++P + I+ PW K V + ++ PE
Sbjct: 242 TPTREQIRE---------MNPNYTEFKFPQIKAHPWTK-----VFRPRTPPE 279
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 21/172 (12%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFGFARKYSVNNTDYKQNLSE 73
+ QL ++ Y H + HRDIK +NLLLD D +KL DFG A++ + N+S
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG----EPNVS- 181
Query: 74 TFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVV 133
C Y Y +PE++ G D+WS G VL ++ G+ F + + L ++ K +
Sbjct: 182 XICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLG 240
Query: 134 FPESPRLSSSCKALISNILSPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPE 185
P ++ ++P + I+ PW K V + ++ PE
Sbjct: 241 TPTREQIRE---------MNPNYTEFKFPQIKAHPWTK-----VFRPRTPPE 278
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 21/173 (12%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFGFARKYSVNNTDYKQNLSE 73
+ QL ++ Y H + HRDIK +NLLLD D +KL DFG A++ + N+S
Sbjct: 146 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG----EPNVS- 200
Query: 74 TFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVV 133
C Y Y +PE++ G D+WS G VL ++ G+ F + + L ++ K +
Sbjct: 201 XICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLG 259
Query: 134 FPESPRLSSSCKALISNILSPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
P ++ ++P + I+ PW K V + ++ PE
Sbjct: 260 TPTREQIRE---------MNPNYTEFKFPQIKAHPWTK-----VFRPRTPPEA 298
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A + Y + + VHRD++ N+L+ + K++DFG AR + + +Y F
Sbjct: 370 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKF- 426
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVY-GRLPFDDTNYSELLKQVQKRVVFP 135
+ +PE +T +SD+WS G++L + GR+P+ E+L QV++ P
Sbjct: 427 -PIKWTAPEAALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 484
Query: 136 ESPRLSSSCKALI 148
P S L+
Sbjct: 485 CPPECPESLHDLM 497
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 219 VAIKIIS-KVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGS 277
VAIK + +P +L+ E +V+K L+H L++ L A+ + +YI+ EY GS
Sbjct: 294 VAIKTLKPGTMSPEAFLQ-----EAQVMKKLRHEKLVQ-LYAVVSEEPIYIVTEYMSKGS 347
Query: 278 LLEVIRKE 285
LL+ ++ E
Sbjct: 348 LLDFLKGE 355
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 69/126 (54%), Gaps = 7/126 (5%)
Query: 19 LADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGS 78
+ + + Y + V+HRD+ N L+ + IK+SDFG R V + Y + F
Sbjct: 112 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR--FVLDDQYTSSTGTKF--P 167
Query: 79 YAYASPEILKGVPYTPQQSDIWSMGVVLFAMVY-GRLPFDDTNYSELLKQVQKRVVFPES 137
+ASPE+ Y+ +SD+WS GV+++ + G++P+++ + SE+++ + +
Sbjct: 168 VKWASPEVFSFSRYS-SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK- 225
Query: 138 PRLSSS 143
PRL+S+
Sbjct: 226 PRLAST 231
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 219 VAIKIISK-VQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGS 277
VAIK I + + D+++ E EV+ L HP L++ + ++ E+ ++G
Sbjct: 34 VAIKTIREGAMSEEDFIE-----EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGC 88
Query: 278 LLEVIRKERYIDEDKALL 295
L + +R +R + + LL
Sbjct: 89 LSDYLRTQRGLFAAETLL 106
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 21/173 (12%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFGFARKYSVNNTDYKQNLSE 73
+ QL ++ Y H + HRDIK +NLLLD D +KL DFG A++ + N+S
Sbjct: 131 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG----EPNVS- 185
Query: 74 TFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVV 133
C Y Y +PE++ G D+WS G VL ++ G+ F + + L ++ K +
Sbjct: 186 XICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLG 244
Query: 134 FPESPRLSSSCKALISNILSPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
P ++ ++P + I+ PW K V + ++ PE
Sbjct: 245 TPTREQIRE---------MNPNYTEFKFPQIKAHPWTK-----VFRPRTPPEA 283
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A + Y + + VHRD+ N+L+ + K++DFG AR + + +Y F
Sbjct: 121 AQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKF- 177
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVY-GRLPFDDTNYSELLKQVQKRVVFP 135
+ +PE +T +SD+WS G++L + GR+P+ E+L QV++ P
Sbjct: 178 -PIKWTAPEAALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 235
Query: 136 ESPRLSSSCKALI 148
P S L+
Sbjct: 236 CPPECPESLHDLM 248
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 219 VAIKIIS-KVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGS 277
VAIK + +P +L+ E +V+K L+H L++ L A+ + +YI+ EY GS
Sbjct: 45 VAIKTLKPGTMSPEAFLQ-----EAQVMKKLRHEKLVQ-LYAVVSEEPIYIVTEYMSKGS 98
Query: 278 LLEVIRKE 285
LL+ ++ E
Sbjct: 99 LLDFLKGE 106
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 69/126 (54%), Gaps = 7/126 (5%)
Query: 19 LADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGS 78
+ + + Y + V+HRD+ N L+ + IK+SDFG R V + Y + F
Sbjct: 115 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR--FVLDDQYTSSTGTKF--P 170
Query: 79 YAYASPEILKGVPYTPQQSDIWSMGVVLFAMVY-GRLPFDDTNYSELLKQVQKRVVFPES 137
+ASPE+ Y+ +SD+WS GV+++ + G++P+++ + SE+++ + +
Sbjct: 171 VKWASPEVFSFSRYS-SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK- 228
Query: 138 PRLSSS 143
PRL+S+
Sbjct: 229 PRLAST 234
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 219 VAIKIISK-VQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGS 277
VAIK I + + D+++ E EV+ L HP L++ + ++ E+ ++G
Sbjct: 37 VAIKTIREGAMSEEDFIE-----EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGC 91
Query: 278 LLEVIRKERYIDEDKALL 295
L + +R +R + + LL
Sbjct: 92 LSDYLRTQRGLFAAETLL 109
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 21/173 (12%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFGFARKYSVNNTDYKQNLSE 73
+ QL ++ Y H + HRDIK +NLLLD D +KL DFG A++ + N+S
Sbjct: 139 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG----EPNVS- 193
Query: 74 TFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVV 133
C Y Y +PE++ G D+WS G VL ++ G+ F + + L ++ K +
Sbjct: 194 XICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLG 252
Query: 134 FPESPRLSSSCKALISNILSPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
P ++ ++P + I+ PW K V + ++ PE
Sbjct: 253 TPTREQIRE---------MNPNYTEFKFPQIKAHPWTK-----VFRPRTPPEA 291
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 67/133 (50%), Gaps = 7/133 (5%)
Query: 3 ILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSV 62
I ++ + ++ Q+ I + H ++HRD+K N+++ +K+ DFG AR
Sbjct: 121 IQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---- 176
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS 122
T + F + Y +PE++ G+ Y + DIWS+G ++ M+ G + F T++
Sbjct: 177 --TAGTSFMMVPFVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHI 233
Query: 123 ELLKQVQKRVVFP 135
+ +V +++ P
Sbjct: 234 DQWNKVIEQLGTP 246
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 75/139 (53%), Gaps = 14/139 (10%)
Query: 1 NDILLDYNTDKARRWFSQ--------LADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLS 52
N LL+Y + R+ +Q + +A++Y K +HRD+ N L++D+ +K+S
Sbjct: 83 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVS 142
Query: 53 DFGFARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-Y 111
DFG +R V + +Y ++ F ++ PE+L ++ +SDIW+ GV+++ +
Sbjct: 143 DFGLSR--YVLDDEYTSSVGSKF--PVRWSPPEVLMYSKFS-SKSDIWAFGVLMWEIYSL 197
Query: 112 GRLPFDDTNYSELLKQVQK 130
G++P++ SE + + +
Sbjct: 198 GKMPYERFTNSETAEHIAQ 216
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 214 RHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYA 273
R DVAIK+I + D +F+ E +V+ L H L++ ++II EY
Sbjct: 26 RGQYDVAIKMIKEGSMSED---EFI-EEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 81
Query: 274 KNGSLLEVIRKERYIDEDKALL 295
NG LL +R+ R+ + + LL
Sbjct: 82 ANGCLLNYLREMRHRFQTQQLL 103
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 69/126 (54%), Gaps = 7/126 (5%)
Query: 19 LADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGS 78
+ + + Y + V+HRD+ N L+ + IK+SDFG R V + Y + F
Sbjct: 132 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR--FVLDDQYTSSTGTKF--P 187
Query: 79 YAYASPEILKGVPYTPQQSDIWSMGVVLFAMVY-GRLPFDDTNYSELLKQVQKRVVFPES 137
+ASPE+ Y+ +SD+WS GV+++ + G++P+++ + SE+++ + +
Sbjct: 188 VKWASPEVFSFSRYS-SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK- 245
Query: 138 PRLSSS 143
PRL+S+
Sbjct: 246 PRLAST 251
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 219 VAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSL 278
VAIK I + D F+ E EV+ L HP L++ + ++ E+ ++G L
Sbjct: 54 VAIKTIKEGSMSED---DFI-EEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCL 109
Query: 279 LEVIRKERYIDEDKALL 295
+ +R +R + + LL
Sbjct: 110 SDYLRTQRGLFAAETLL 126
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 5/114 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
QLA ++Y + +HRD+ N+L+ + +K++DFG AR +NN D + +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDXXKKTTNGRL- 221
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK 130
+ +PE L YT QSD+WS GV+++ + G P+ EL K +++
Sbjct: 222 PVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 241 EIEVVKGL-KHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKER 286
E+E++K + KH N+I L A +Y+I+EYA G+L E +R R
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR 136
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 21/173 (12%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFGFARKYSVNNTDYKQNLSE 73
+ QL ++ Y H + HRDIK +NLLLD D +KL DFG A++ + N+S
Sbjct: 161 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG----EPNVS- 215
Query: 74 TFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVV 133
C Y Y +PE++ G D+WS G VL ++ G+ F + + L ++ K +
Sbjct: 216 XICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLG 274
Query: 134 FPESPRLSSSCKALISNILSPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
P ++ ++P + I+ PW K V + ++ PE
Sbjct: 275 TPTREQIRE---------MNPNYTEFKFPQIKAHPWTK-----VFRPRTPPEA 313
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 65/121 (53%), Gaps = 10/121 (8%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + Y H ++HRD+K NL +++ +K+ DFG AR+ +++ + +
Sbjct: 136 QMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQ---ADSEMXGXVVTRW-- 190
Query: 78 SYAYASPE-ILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPE 136
Y +PE IL + YT Q DIWS+G ++ M+ G+ F +++ + LK++ K P
Sbjct: 191 ---YRAPEVILNWMRYT-QTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPP 246
Query: 137 S 137
+
Sbjct: 247 A 247
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 75/139 (53%), Gaps = 14/139 (10%)
Query: 1 NDILLDYNTDKARRWFSQ--------LADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLS 52
N LL+Y + R+ +Q + +A++Y K +HRD+ N L++D+ +K+S
Sbjct: 87 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVS 146
Query: 53 DFGFARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-Y 111
DFG +R V + +Y ++ F ++ PE+L ++ +SDIW+ GV+++ +
Sbjct: 147 DFGLSR--YVLDDEYTSSVGSKF--PVRWSPPEVLMYSKFS-SKSDIWAFGVLMWEIYSL 201
Query: 112 GRLPFDDTNYSELLKQVQK 130
G++P++ SE + + +
Sbjct: 202 GKMPYERFTNSETAEHIAQ 220
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 214 RHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYA 273
R DVAIK+I + D +F+ E +V+ L H L++ ++II EY
Sbjct: 30 RGQYDVAIKMIKEGSMSED---EFI-EEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 85
Query: 274 KNGSLLEVIRKERYIDEDKALL 295
NG LL +R+ R+ + + LL
Sbjct: 86 ANGCLLNYLREMRHRFQTQQLL 107
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 14 RWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKY---NIKLSDFGFARKYSVNNTDYKQN 70
R Q+ + + Y H+ ++VH D+K +N+LL Y +IK+ DFG +RK +
Sbjct: 135 RLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG-----HACE 189
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF 116
L E G+ Y +PEIL P T +D+W++G++ + ++ PF
Sbjct: 190 LREIM-GTPEYLAPEILNYDPIT-TATDMWNIGIIAYMLLTHTSPF 233
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 75/139 (53%), Gaps = 14/139 (10%)
Query: 1 NDILLDYNTDKARRWFSQ--------LADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLS 52
N LL+Y + R+ +Q + +A++Y K +HRD+ N L++D+ +K+S
Sbjct: 103 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVS 162
Query: 53 DFGFARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-Y 111
DFG +R V + +Y ++ F ++ PE+L ++ +SDIW+ GV+++ +
Sbjct: 163 DFGLSR--YVLDDEYTSSVGSKF--PVRWSPPEVLMYSKFS-SKSDIWAFGVLMWEIYSL 217
Query: 112 GRLPFDDTNYSELLKQVQK 130
G++P++ SE + + +
Sbjct: 218 GKMPYERFTNSETAEHIAQ 236
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 214 RHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYA 273
R DVAIK+I + D +F+ E +V+ L H L++ ++II EY
Sbjct: 46 RGQYDVAIKMIKEGSMSED---EFI-EEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101
Query: 274 KNGSLLEVIRKERYIDEDKALL 295
NG LL +R+ R+ + + LL
Sbjct: 102 ANGCLLNYLREMRHRFQTQQLL 123
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 75/152 (49%), Gaps = 12/152 (7%)
Query: 3 ILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSV 62
I ++ + ++ Q+ I + H ++HRD+K N+++ +K+ DFG AR
Sbjct: 119 IQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR---- 174
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS 122
T + + + Y +PE++ G+ Y + DIWS+G ++ M+ G + F T++
Sbjct: 175 --TAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
Query: 123 ELLKQVQKRVVFPESP----RLSSSCKALISN 150
+ +V +++ P SP +L + + + N
Sbjct: 232 DQWNKVIEQLGTP-SPEFMKKLQPTVRTYVEN 262
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 5/114 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
QLA ++Y + +HRD+ N+L+ + +K++DFG AR +NN D + +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDXXKKTTNGRL- 221
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK 130
+ +PE L YT QSD+WS GV+++ + G P+ EL K +++
Sbjct: 222 PVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 241 EIEVVKGL-KHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKER 286
E+E++K + KH N+I L A +Y+I+EYA G+L E +R R
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR 136
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 75/139 (53%), Gaps = 14/139 (10%)
Query: 1 NDILLDYNTDKARRWFSQ--------LADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLS 52
N LL+Y + R+ +Q + +A++Y K +HRD+ N L++D+ +K+S
Sbjct: 88 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVS 147
Query: 53 DFGFARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-Y 111
DFG +R V + +Y ++ F ++ PE+L ++ +SDIW+ GV+++ +
Sbjct: 148 DFGLSR--YVLDDEYTSSVGSKF--PVRWSPPEVLMYSKFS-SKSDIWAFGVLMWEIYSL 202
Query: 112 GRLPFDDTNYSELLKQVQK 130
G++P++ SE + + +
Sbjct: 203 GKMPYERFTNSETAEHIAQ 221
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 214 RHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYA 273
R DVAIK+I + D +F+ E +V+ L H L++ ++II EY
Sbjct: 31 RGQYDVAIKMIKEGSMSED---EFI-EEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 86
Query: 274 KNGSLLEVIRKERYIDEDKALL 295
NG LL +R+ R+ + + LL
Sbjct: 87 ANGCLLNYLREMRHRFQTQQLL 108
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 75/139 (53%), Gaps = 14/139 (10%)
Query: 1 NDILLDYNTDKARRWFSQ--------LADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLS 52
N LL+Y + R+ +Q + +A++Y K +HRD+ N L++D+ +K+S
Sbjct: 94 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVS 153
Query: 53 DFGFARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-Y 111
DFG +R V + +Y ++ F ++ PE+L ++ +SDIW+ GV+++ +
Sbjct: 154 DFGLSR--YVLDDEYTSSVGSKF--PVRWSPPEVLMYSKFS-SKSDIWAFGVLMWEIYSL 208
Query: 112 GRLPFDDTNYSELLKQVQK 130
G++P++ SE + + +
Sbjct: 209 GKMPYERFTNSETAEHIAQ 227
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 214 RHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYA 273
R DVAIK+I + D +F+ E +V+ L H L++ ++II EY
Sbjct: 37 RGQYDVAIKMIKEGSMSED---EFI-EEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 92
Query: 274 KNGSLLEVIRKERYIDEDKALL 295
NG LL +R+ R+ + + LL
Sbjct: 93 ANGCLLNYLREMRHRFQTQQLL 114
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 21/172 (12%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFGFARKYSVNNTDYKQNLSE 73
+ QL ++ Y H + HRDIK +NLLLD D +KL DFG A++ + N+S
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG----EPNVS- 181
Query: 74 TFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVV 133
C Y Y +PE++ G D+WS G VL ++ G+ F + + L ++ K +
Sbjct: 182 XICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLG 240
Query: 134 FPESPRLSSSCKALISNILSPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPE 185
P ++ ++P I+ PW K V + ++ PE
Sbjct: 241 TPTREQIRE---------MNPNYTEFAFPQIKAHPWTK-----VFRPRTPPE 278
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Query: 19 LADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTD--YKQNLSETFC 76
+A + Y + S VHRD+ N+L++ K+SDFG +R N++D Y +L
Sbjct: 125 IASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKI- 183
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLF-AMVYGRLPFDDTNYSELLKQVQKRVVFP 135
+ +PE + +T SD WS G+V++ M +G P+ D + +++ +++ P
Sbjct: 184 -PIRWTAPEAIAFRKFT-SASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLP 241
Query: 136 ESPRLSSSCKALI 148
P +S L+
Sbjct: 242 PPPDCPTSLHQLM 254
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 235 KKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIR 283
++FL E ++ +HPN+IR + + V I+ E+ +NG+L +R
Sbjct: 60 REFL-SEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLR 107
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 75/152 (49%), Gaps = 12/152 (7%)
Query: 3 ILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSV 62
I ++ + ++ Q+ I + H ++HRD+K N+++ +K+ DFG AR
Sbjct: 119 IQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR---- 174
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS 122
T + + + Y +PE++ G+ Y + DIWS+G ++ M+ G + F T++
Sbjct: 175 --TAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
Query: 123 ELLKQVQKRVVFPESP----RLSSSCKALISN 150
+ +V +++ P SP +L + + + N
Sbjct: 232 DQWNKVIEQLGTP-SPEFMKKLQPTVRTYVEN 262
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 77/175 (44%), Gaps = 25/175 (14%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFGFARKY--SVNNTDYKQNL 71
+ QL ++ Y H + HRDIK +NLLLD D +KL DFG A++ N Y
Sbjct: 132 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---- 187
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKR 131
C Y Y +PE++ G D+WS G VL ++ G+ F + + L ++ K
Sbjct: 188 ---ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 243
Query: 132 VVFPESPRLSSSCKALISNILSPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
+ P ++ ++P + I+ PW K V + ++ PE
Sbjct: 244 LGTPTREQIRE---------MNPNYTEFKFPQIKAHPWTK-----VFRPRTPPEA 284
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 21/172 (12%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFGFARKYSVNNTDYKQNLSE 73
+ QL ++ Y H + HRDIK +NLLLD D +KL DFG A++ + N+S
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG----EPNVS- 181
Query: 74 TFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVV 133
C Y Y +PE++ G D+WS G VL ++ G+ F + + L ++ K +
Sbjct: 182 YICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLG 240
Query: 134 FPESPRLSSSCKALISNILSPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPE 185
P ++ ++P + I+ PW K V + ++ PE
Sbjct: 241 TPTREQIRE---------MNPNYTEFKFPQIKAHPWTK-----VFRPRTPPE 278
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 21/172 (12%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFGFARKYSVNNTDYKQNLSE 73
+ QL ++ Y H + HRDIK +NLLLD D +KL DFG A++ + N+S
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG----EPNVS- 181
Query: 74 TFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVV 133
C Y Y +PE++ G D+WS G VL ++ G+ F + + L ++ K +
Sbjct: 182 YICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLG 240
Query: 134 FPESPRLSSSCKALISNILSPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPE 185
P ++ ++P + I+ PW K V + ++ PE
Sbjct: 241 TPTREQIRE---------MNPNYTEFKFPQIKAHPWTK-----VFRPRTPPE 278
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 65/118 (55%), Gaps = 16/118 (13%)
Query: 31 VVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGSYAYASPEILKGV 90
++HRDIK N+LLD NIKL DFG + + V++ ++ G Y +PE +
Sbjct: 147 IIHRDIKPSNILLDRSGNIKLCDFGISGQL-VDSIAKTRD-----AGCRPYMAPERID-- 198
Query: 91 PYTPQQ-----SDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPESPRLSSS 143
P +Q SD+WS+G+ L+ + GR P+ ++ + Q+ + VV + P+LS+S
Sbjct: 199 PSASRQGYDVRSDVWSLGITLYELATGRFPY--PKWNSVFDQLTQ-VVKGDPPQLSNS 253
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q+A + Y + + VHRD++ N+L+ + K++DFG R + + +Y F
Sbjct: 288 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGR--LIEDNEYTARQGAKF- 344
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVY-GRLPFDDTNYSELLKQVQKRVVFP 135
+ +PE +T +SD+WS G++L + GR+P+ E+L QV++ P
Sbjct: 345 -PIKWTAPEAALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 402
Query: 136 ESPRLSSSCKALI 148
P S L+
Sbjct: 403 CPPECPESLHDLM 415
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 219 VAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSL 278
VAIK + P + + +E +V+K L+H L++ L A+ + +YI+ EY GSL
Sbjct: 212 VAIKTLK----PGNMSPEAFLQEAQVMKKLRHEKLVQ-LYAVVSEEPIYIVTEYMSKGSL 266
Query: 279 LEVIRKE 285
L+ ++ E
Sbjct: 267 LDFLKGE 273
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 13/134 (9%)
Query: 27 HKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGSYAYASPE- 85
K V+HRD+K N+LLD++ IKL DFG + + + + G AY +PE
Sbjct: 142 EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA------KDRSAGCAAYMAPER 195
Query: 86 ILKGVPYTPQ---QSDIWSMGVVLFAMVYGRLPFDD--TNYSELLKQVQKR-VVFPESPR 139
I P P ++D+WS+G+ L + G+ P+ + T++ L K +Q+ + P
Sbjct: 196 IDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMG 255
Query: 140 LSSSCKALISNILS 153
S ++ + + L+
Sbjct: 256 FSGDFQSFVKDCLT 269
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 21/173 (12%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFGFARKYSVNNTDYKQNLSE 73
+ QL ++ Y H + HRDIK +NLLLD D +KL DFG A++ + N+S
Sbjct: 140 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG----EPNVS- 194
Query: 74 TFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVV 133
C Y Y +PE++ G D+WS G VL ++ G+ F + + L ++ K +
Sbjct: 195 YICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLG 253
Query: 134 FPESPRLSSSCKALISNILSPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
P ++ ++P + I+ PW K V + ++ PE
Sbjct: 254 TPTREQIRE---------MNPNYTEFKFPQIKAHPWTK-----VFRPRTPPEA 292
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 75/152 (49%), Gaps = 12/152 (7%)
Query: 3 ILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSV 62
I ++ + ++ Q+ I + H ++HRD+K N+++ +K+ DFG AR
Sbjct: 119 IQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---- 174
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS 122
T + + + Y +PE++ G+ Y + DIWS+G ++ M+ G + F T++
Sbjct: 175 --TAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
Query: 123 ELLKQVQKRVVFPESP----RLSSSCKALISN 150
+ +V +++ P SP +L + + + N
Sbjct: 232 DQWNKVIEQLGTP-SPEFMKKLQPTVRTYVEN 262
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 77/175 (44%), Gaps = 25/175 (14%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFGFARKY--SVNNTDYKQNL 71
+ QL ++ Y H + HRDIK +NLLLD D +KL DFG A++ N Y
Sbjct: 155 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---- 210
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKR 131
C Y Y +PE++ G D+WS G VL ++ G+ F + + L ++ K
Sbjct: 211 ---ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 266
Query: 132 VVFPESPRLSSSCKALISNILSPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
+ P ++ ++P + I+ PW K V + ++ PE
Sbjct: 267 LGTPTREQIRE---------MNPNYTEFKFPQIKAHPWTK-----VFRPRTPPEA 307
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 64/118 (54%), Gaps = 10/118 (8%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN-IKLSDFGFARKYSVNNTDYKQNLSE 73
+ QL A+ + H + HRDIK +NLL++ K N +KL DFG A+K +
Sbjct: 146 YIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSV-----A 200
Query: 74 TFCGSYAYASPEILKGVP-YTPQQSDIWSMGVVLFAMVYGRLPF-DDTNYSELLKQVQ 129
C + Y +PE++ G YTP D+WS+G V ++ G+ F +T+ +L++ +Q
Sbjct: 201 XICSRF-YRAPELMLGATEYTP-SIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQ 256
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 75/152 (49%), Gaps = 12/152 (7%)
Query: 3 ILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSV 62
I ++ + ++ Q+ I + H ++HRD+K N+++ +K+ DFG AR
Sbjct: 119 IQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---- 174
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS 122
T + + + Y +PE++ G+ Y + DIWS+G ++ M+ G + F T++
Sbjct: 175 --TAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
Query: 123 ELLKQVQKRVVFPESP----RLSSSCKALISN 150
+ +V +++ P SP +L + + + N
Sbjct: 232 DQWNKVIEQLGTP-SPEFMKKLQPTVRTYVEN 262
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 77/175 (44%), Gaps = 25/175 (14%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFGFARKY--SVNNTDYKQNL 71
+ QL ++ Y H + HRDIK +NLLLD D +KL DFG A++ N Y
Sbjct: 161 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---- 216
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKR 131
C Y Y +PE++ G D+WS G VL ++ G+ F + + L ++ K
Sbjct: 217 ---ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 272
Query: 132 VVFPESPRLSSSCKALISNILSPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
+ P ++ ++P + I+ PW K V + ++ PE
Sbjct: 273 LGTPTREQIRE---------MNPNYTEFKFPQIKAHPWTK-----VFRPRTPPEA 313
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 21/172 (12%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFGFARKYSVNNTDYKQNLSE 73
+ QL ++ Y H + HRDIK +NLLLD D +KL DFG A++ + N+S
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG----EPNVS- 181
Query: 74 TFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVV 133
C Y Y +PE++ G D+WS G VL ++ G+ F + + L ++ K +
Sbjct: 182 YICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLG 240
Query: 134 FPESPRLSSSCKALISNILSPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPE 185
P ++ ++P I+ PW K V + ++ PE
Sbjct: 241 TPTREQIRE---------MNPNYTEFAFPQIKAHPWTK-----VFRPRTPPE 278
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 77/175 (44%), Gaps = 25/175 (14%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFGFARKY--SVNNTDYKQNL 71
+ QL ++ Y H + HRDIK +NLLLD D +KL DFG A++ N Y
Sbjct: 163 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---- 218
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKR 131
C Y Y +PE++ G D+WS G VL ++ G+ F + + L ++ K
Sbjct: 219 ---ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 274
Query: 132 VVFPESPRLSSSCKALISNILSPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
+ P ++ ++P + I+ PW K V + ++ PE
Sbjct: 275 LGTPTREQIRE---------MNPNYTEFKFPQIKAHPWTK-----VFRPRTPPEA 315
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 77/175 (44%), Gaps = 25/175 (14%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFGFARKY--SVNNTDYKQNL 71
+ QL ++ Y H + HRDIK +NLLLD D +KL DFG A++ N Y
Sbjct: 206 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---- 261
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKR 131
C Y Y +PE++ G D+WS G VL ++ G+ F + + L ++ K
Sbjct: 262 ---ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 317
Query: 132 VVFPESPRLSSSCKALISNILSPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
+ P ++ ++P + I+ PW K V + ++ PE
Sbjct: 318 LGTPTREQIRE---------MNPNYTEFKFPQIKAHPWTK-----VFRPRTPPEA 358
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+A + + K VHRD+ N +LD+K+ +K++DFG AR D N +
Sbjct: 142 QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKL- 200
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTN 120
+ + E L+ +T +SD+WS GV+L+ M G P+ D N
Sbjct: 201 PVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVN 243
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+A + + K VHRD+ N +LD+K+ +K++DFG AR D N +
Sbjct: 141 QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL- 199
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTN 120
+ + E L+ +T +SD+WS GV+L+ M G P+ D N
Sbjct: 200 PVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVN 242
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+A + + K VHRD+ N +LD+K+ +K++DFG AR D N +
Sbjct: 200 QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL- 258
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTN 120
+ + E L+ +T +SD+WS GV+L+ M G P+ D N
Sbjct: 259 PVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVN 301
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+A + + K VHRD+ N +LD+K+ +K++DFG AR D N +
Sbjct: 139 QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL- 197
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTN 120
+ + E L+ +T +SD+WS GV+L+ M G P+ D N
Sbjct: 198 PVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVN 240
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+A + + K VHRD+ N +LD+K+ +K++DFG AR D N +
Sbjct: 141 QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL- 199
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTN 120
+ + E L+ +T +SD+WS GV+L+ M G P+ D N
Sbjct: 200 PVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVN 242
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+A + + K VHRD+ N +LD+K+ +K++DFG AR D N +
Sbjct: 142 QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL- 200
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTN 120
+ + E L+ +T +SD+WS GV+L+ M G P+ D N
Sbjct: 201 PVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVN 243
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 67/133 (50%), Gaps = 7/133 (5%)
Query: 3 ILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSV 62
I ++ + ++ Q+ I + H ++HRD+K N+++ +K+ DFG AR
Sbjct: 119 IQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---- 174
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS 122
T + + + Y +PE++ G+ Y + DIWS+G ++ M+ G + F T++
Sbjct: 175 --TAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
Query: 123 ELLKQVQKRVVFP 135
+ +V +++ P
Sbjct: 232 DQWNKVIEQLGTP 244
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+A + + K VHRD+ N +LD+K+ +K++DFG AR D N +
Sbjct: 146 QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL- 204
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTN 120
+ + E L+ +T +SD+WS GV+L+ M G P+ D N
Sbjct: 205 PVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVN 247
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 77/175 (44%), Gaps = 25/175 (14%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFGFARKY--SVNNTDYKQNL 71
+ QL ++ Y H + HRDIK +NLLLD D +KL DFG A++ N Y
Sbjct: 165 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---- 220
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKR 131
C Y Y +PE++ G D+WS G VL ++ G+ F + + L ++ K
Sbjct: 221 ---ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 276
Query: 132 VVFPESPRLSSSCKALISNILSPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
+ P ++ ++P + I+ PW K V + ++ PE
Sbjct: 277 LGTPTREQIRE---------MNPNYTEFKFPQIKAHPWTK-----VFRPRTPPEA 317
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 67/133 (50%), Gaps = 7/133 (5%)
Query: 3 ILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSV 62
I ++ + ++ Q+ I + H ++HRD+K N+++ +K+ DFG AR
Sbjct: 120 IQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---- 175
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS 122
T + + + Y +PE++ G+ Y + DIWS+G ++ M+ G + F T++
Sbjct: 176 --TAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHI 232
Query: 123 ELLKQVQKRVVFP 135
+ +V +++ P
Sbjct: 233 DQWNKVIEQLGTP 245
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 12/126 (9%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKY-NIKLSDFGFARKYSV 62
L DY+ R + +L A+DYCH + ++HRD+K N+++D + ++L D+G A Y
Sbjct: 123 LTDYDI---RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 179
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF--DDTN 120
+ S F G PE+L + D+WS+G + M++ + PF N
Sbjct: 180 GKEYNVRVASRYFKG------PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDN 233
Query: 121 YSELLK 126
+ +L+K
Sbjct: 234 HDQLVK 239
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 96/227 (42%), Gaps = 51/227 (22%)
Query: 3 ILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSV 62
I ++ + ++ Q+ I + H ++HRD+K N+++ +K+ DFG AR
Sbjct: 112 IQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR---- 167
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNY- 121
T + + + Y +PE++ G+ Y + DIWS+G ++ MV ++ F +Y
Sbjct: 168 --TAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYI 224
Query: 122 --------------SELLKQVQKRV-----------------VFPES--PRLS------- 141
E +K++Q V +FP+S P S
Sbjct: 225 DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKA 284
Query: 142 SSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
S + L+S +L P K RI ++D Q P++ +P P++
Sbjct: 285 SQARDLLSKMLVIDPAK-RISVDDALQHPYINVWYDPAEVEAPPPQI 330
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 12/126 (9%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKY-NIKLSDFGFARKYSV 62
L DY+ R + +L A+DYCH + ++HRD+K N+++D + ++L D+G A Y
Sbjct: 122 LTDYDI---RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 178
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF--DDTN 120
+ S F G PE+L + D+WS+G + M++ + PF N
Sbjct: 179 GKEYNVRVASRYFKG------PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDN 232
Query: 121 YSELLK 126
+ +L+K
Sbjct: 233 HDQLVK 238
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 96/227 (42%), Gaps = 51/227 (22%)
Query: 3 ILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSV 62
I ++ + ++ Q+ I + H ++HRD+K N+++ +K+ DFG AR
Sbjct: 119 IQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR---- 174
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNY- 121
T + + + Y +PE++ G+ Y + DIWS+G ++ MV ++ F +Y
Sbjct: 175 --TAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYI 231
Query: 122 --------------SELLKQVQKRV-----------------VFPES--PRLS------- 141
E +K++Q V +FP+S P S
Sbjct: 232 DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKA 291
Query: 142 SSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
S + L+S +L P K RI ++D Q P++ +P P++
Sbjct: 292 SQARDLLSKMLVIDPAK-RISVDDALQHPYINVWYDPAEVEAPPPQI 337
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 68/126 (53%), Gaps = 8/126 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
SQ+A + Y + VHRD+ N L+ +K+ DFG +R V +TDY + T
Sbjct: 140 SQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSR--DVYSTDYYRVGGHTML 197
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQV-QKRVVF 134
+ PE + +T +SD+WS GV+L+ + YG+ P+ + +E+++ + Q RV+
Sbjct: 198 -PIRWMPPESIMYRKFT-TESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVL- 254
Query: 135 PESPRL 140
E PR+
Sbjct: 255 -ERPRV 259
Score = 31.2 bits (69), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 35/68 (51%)
Query: 216 SQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKN 275
++D + + ++ P +K RE E++ L+H ++++F + ++ EY K+
Sbjct: 42 TKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKH 101
Query: 276 GSLLEVIR 283
G L + +R
Sbjct: 102 GDLNKFLR 109
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 12/126 (9%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKY-NIKLSDFGFARKYSV 62
L DY+ R + +L A+DYCH + ++HRD+K N+++D + ++L D+G A Y
Sbjct: 143 LTDYDI---RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 199
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF--DDTN 120
+ S F G PE+L + D+WS+G + M++ + PF N
Sbjct: 200 GKEYNVRVASRYFKG------PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDN 253
Query: 121 YSELLK 126
+ +L+K
Sbjct: 254 HDQLVK 259
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 12/126 (9%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKY-NIKLSDFGFARKYSV 62
L DY+ R + +L A+DYCH + ++HRD+K N+++D + ++L D+G A Y
Sbjct: 122 LTDYDI---RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 178
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF--DDTN 120
+ S F G PE+L + D+WS+G + M++ + PF N
Sbjct: 179 GKEYNVRVASRYFKG------PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDN 232
Query: 121 YSELLK 126
+ +L+K
Sbjct: 233 HDQLVK 238
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 12/126 (9%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKY-NIKLSDFGFARKYSV 62
L DY+ R + +L A+DYCH + ++HRD+K N+++D + ++L D+G A Y
Sbjct: 123 LTDYDI---RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 179
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF--DDTN 120
+ S F G PE+L + D+WS+G + M++ + PF N
Sbjct: 180 GKEYNVRVASRYFKG------PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDN 233
Query: 121 YSELLK 126
+ +L+K
Sbjct: 234 HDQLVK 239
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 12/126 (9%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKY-NIKLSDFGFARKYSV 62
L DY+ R + +L A+DYCH + ++HRD+K N+++D + ++L D+G A Y
Sbjct: 122 LTDYDI---RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 178
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF--DDTN 120
+ S F G PE+L + D+WS+G + M++ + PF N
Sbjct: 179 GKEYNVRVASRYFKG------PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDN 232
Query: 121 YSELLK 126
+ +L+K
Sbjct: 233 HDQLVK 238
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 96/227 (42%), Gaps = 51/227 (22%)
Query: 3 ILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSV 62
I ++ + ++ Q+ I + H ++HRD+K N+++ +K+ DFG AR
Sbjct: 119 IQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR---- 174
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNY- 121
T + + + Y +PE++ G+ Y + DIWS+G ++ MV ++ F +Y
Sbjct: 175 --TAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYI 231
Query: 122 --------------SELLKQVQKRV-----------------VFPES--PRLS------- 141
E +K++Q V +FP+S P S
Sbjct: 232 DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKA 291
Query: 142 SSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
S + L+S +L P K RI ++D Q P++ +P P++
Sbjct: 292 SQARDLLSKMLVIDPAK-RISVDDALQHPYINVWYDPAEVEAPPPQI 337
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 14/115 (12%)
Query: 5 LDYNTDKARR----WFSQLADAIDYCHKKSVVHRDIKCENLLL-----DDKYNIKLSDFG 55
+D N D + R + QL + +++CH + +HRD+K +NLLL + +K+ DFG
Sbjct: 123 MDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFG 182
Query: 56 FARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV 110
AR + + + + + Y PEIL G + DIWS+ + M+
Sbjct: 183 LARAFGIPIRQFTHEIITLW-----YRPPEILLGSRHYSTSVDIWSIACIWAEML 232
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLP----REIEVVKGLKHPNLIRFL 257
+Y V A ++ VAIK I +++ ++ +P RE+ ++K L+H N+I
Sbjct: 45 GTYGEVYKAIDTVTNETVAIKRIR-----LEHEEEGVPGTAIREVSLLKELQHRNIIELK 99
Query: 258 QAIETTHRVYIIMEYAKN 275
I HR+++I EYA+N
Sbjct: 100 SVIHHNHRLHLIFEYAEN 117
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 12/126 (9%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKY-NIKLSDFGFARKYSV 62
L DY+ R + +L A+DYCH + ++HRD+K N+++D + ++L D+G A Y
Sbjct: 122 LTDYDI---RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 178
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF--DDTN 120
+ S F G PE+L + D+WS+G + M++ + PF N
Sbjct: 179 GKEYNVRVASRYFKG------PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDN 232
Query: 121 YSELLK 126
+ +L+K
Sbjct: 233 HDQLVK 238
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 12/126 (9%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKY-NIKLSDFGFARKYSV 62
L DY+ R + +L A+DYCH + ++HRD+K N+++D + ++L D+G A Y
Sbjct: 122 LTDYDI---RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 178
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF--DDTN 120
+ S F G PE+L + D+WS+G + M++ + PF N
Sbjct: 179 GKEYNVRVASRYFKG------PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDN 232
Query: 121 YSELLK 126
+ +L+K
Sbjct: 233 HDQLVK 238
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 71/140 (50%), Gaps = 26/140 (18%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFAR---KYSVNNTDYKQNLSE 73
+Q+A+ + + +++ +HRD++ N+L+ K++DFG AR K+ +
Sbjct: 285 AQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFPIK---------- 334
Query: 74 TFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSELLKQVQKRV 132
+ +PE + +T +SD+WS G++L +V YGR+P+ + E+++ +++
Sbjct: 335 -------WTAPEAINFGSFT-IKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY 386
Query: 133 VFPESPRLSSSCKALISNIL 152
P +C + NI+
Sbjct: 387 RMPR----PENCPEELYNIM 402
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V +AT +H++ VA+K + ++ FL E V+K L+H L++ L A+
Sbjct: 193 GQFGEVWMATYNKHTK-VAVKTMKPGSMSVE---AFLA-EANVMKTLQHDKLVK-LHAVV 246
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKE 285
T +YII E+ GSLL+ ++ +
Sbjct: 247 TKEPIYIITEFMAKGSLLDFLKSD 270
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+A ++Y K +HRD+ N+L+ + +K++DFG AR +++ DY + +
Sbjct: 151 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYKKTTNGRL- 207
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK 130
+ +PE L YT QSD+WS GV+L+ + G P+ EL K +++
Sbjct: 208 PVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 260
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 241 EIEVVKGL-KHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKER 286
E+E++K + KH N+I L A +Y+I+EYA G+L E ++ R
Sbjct: 76 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR 122
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 64/125 (51%), Gaps = 7/125 (5%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ I + H ++HRD+K N+++ +K+ DFG AR N + +
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN------FMMTPYVV 187
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPES 137
+ Y +PE++ G+ Y DIWS+G ++ +V G + F T++ + +V +++ P +
Sbjct: 188 TRYYRAPEVILGMGYA-ANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSA 246
Query: 138 PRLSS 142
+++
Sbjct: 247 EFMAA 251
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 12/126 (9%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKY-NIKLSDFGFARKYSV 62
L DY+ R + +L A+DYCH + ++HRD+K N+++D + ++L D+G A Y
Sbjct: 122 LTDYDI---RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 178
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF--DDTN 120
+ S F G PE+L + D+WS+G + M++ + PF N
Sbjct: 179 GKEYNVRVASRYFKG------PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDN 232
Query: 121 YSELLK 126
+ +L+K
Sbjct: 233 HDQLVK 238
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+A ++Y K +HRD+ N+L+ + +K++DFG AR +++ DY + +
Sbjct: 150 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYKKTTNGRL- 206
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK 130
+ +PE L YT QSD+WS GV+L+ + G P+ EL K +++
Sbjct: 207 PVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 259
Score = 34.7 bits (78), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 241 EIEVVKGL-KHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKER 286
E+E++K + KH N+I L A +Y+I+EYA G+L E ++ R
Sbjct: 75 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR 121
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 67/133 (50%), Gaps = 6/133 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
QL+ A+ Y K VHRDI N+L+ +KL DFG +R Y ++T YK + +
Sbjct: 116 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKL--- 171
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVVFPE 136
+ +PE + +T SD+W GV ++ +++G PF ++++ +++ P
Sbjct: 172 PIKWMAPESINFRRFT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPM 230
Query: 137 SPRLSSSCKALIS 149
P + +L++
Sbjct: 231 PPNCPPTLYSLMT 243
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 67/133 (50%), Gaps = 6/133 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
QL+ A+ Y K VHRDI N+L+ +KL DFG +R Y ++T YK + +
Sbjct: 119 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKL--- 174
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVVFPE 136
+ +PE + +T SD+W GV ++ +++G PF ++++ +++ P
Sbjct: 175 PIKWMAPESINFRRFT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPM 233
Query: 137 SPRLSSSCKALIS 149
P + +L++
Sbjct: 234 PPNCPPTLYSLMT 246
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 12/126 (9%)
Query: 4 LLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKY-NIKLSDFGFARKYSV 62
L DY+ R + +L A+DYCH + ++HRD+K N+++D + ++L D+G A Y
Sbjct: 124 LTDYDI---RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 180
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF--DDTN 120
+ S F G PE+L + D+WS+G + M++ + PF N
Sbjct: 181 GKEYNVRVASRYFKG------PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDN 234
Query: 121 YSELLK 126
+ +L+K
Sbjct: 235 HDQLVK 240
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 67/133 (50%), Gaps = 6/133 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
QL+ A+ Y K VHRDI N+L+ +KL DFG +R Y ++T YK + +
Sbjct: 119 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKL--- 174
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVVFPE 136
+ +PE + +T SD+W GV ++ +++G PF ++++ +++ P
Sbjct: 175 PIKWMAPESINFRRFT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPM 233
Query: 137 SPRLSSSCKALIS 149
P + +L++
Sbjct: 234 PPNCPPTLYSLMT 246
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 74/139 (53%), Gaps = 14/139 (10%)
Query: 1 NDILLDYNTDKARRWFSQ--------LADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLS 52
N LL+Y + R+ +Q + +A++Y K +HRD+ N L++D+ +K+S
Sbjct: 88 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVS 147
Query: 53 DFGFARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-Y 111
DFG +R V + +Y + F ++ PE+L ++ +SDIW+ GV+++ +
Sbjct: 148 DFGLSR--YVLDDEYTSSRGSKF--PVRWSPPEVLMYSKFS-SKSDIWAFGVLMWEIYSL 202
Query: 112 GRLPFDDTNYSELLKQVQK 130
G++P++ SE + + +
Sbjct: 203 GKMPYERFTNSETAEHIAQ 221
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 214 RHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYA 273
R DVAIK+I + D +F+ E +V+ L H L++ ++II EY
Sbjct: 31 RGQYDVAIKMIKEGSMSED---EFI-EEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 86
Query: 274 KNGSLLEVIRKERYIDEDKALL 295
NG LL +R+ R+ + + LL
Sbjct: 87 ANGCLLNYLREMRHRFQTQQLL 108
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+A ++Y K +HRD+ N+L+ + +K++DFG AR +++ DY + +
Sbjct: 158 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYKKTTNGRL- 214
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK 130
+ +PE L YT QSD+WS GV+L+ + G P+ EL K +++
Sbjct: 215 PVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 267
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 241 EIEVVKGL-KHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKER 286
E+E++K + KH N+I L A +Y+I+EYA G+L E ++ R
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR 129
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+A ++Y K +HRD+ N+L+ + +K++DFG AR +++ DY + +
Sbjct: 143 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYKKTTNGRL- 199
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK 130
+ +PE L YT QSD+WS GV+L+ + G P+ EL K +++
Sbjct: 200 PVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 252
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 241 EIEVVKGL-KHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSE 299
E+E++K + KH N+I L A +Y+I+EYA G+L E ++ R + CY+
Sbjct: 68 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE---YCYNP 124
Query: 300 VSNLSQTFS-----RCCYQ 313
N + S C YQ
Sbjct: 125 SHNPEEQLSSKDLVSCAYQ 143
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 67/133 (50%), Gaps = 6/133 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
QL+ A+ Y K VHRDI N+L+ +KL DFG +R Y ++T YK + +
Sbjct: 124 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKL--- 179
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVVFPE 136
+ +PE + +T SD+W GV ++ +++G PF ++++ +++ P
Sbjct: 180 PIKWMAPESINFRRFT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPM 238
Query: 137 SPRLSSSCKALIS 149
P + +L++
Sbjct: 239 PPNCPPTLYSLMT 251
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 69/124 (55%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q++ A++Y KK+ +HRD+ N L+ + + +K++DFG +R + Y + F
Sbjct: 118 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTYTAHAGAKF- 174
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE L ++ +SD+W+ GV+L+ + YG P+ + S++ + ++K R+
Sbjct: 175 -PIKWTAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 232
Query: 134 FPES 137
PE
Sbjct: 233 RPEG 236
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
Y V ++S VA+K + + ++ +FL +E V+K +KHPNL++ L
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFL-KEAAVMKEIKHPNLVQLLGVCT 79
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
YII+E+ G+LL+ +R+
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRE 102
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 69/124 (55%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q++ A++Y KK+ +HRD+ N L+ + + +K++DFG +R + Y + F
Sbjct: 118 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTYTAHAGAKF- 174
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE L ++ +SD+W+ GV+L+ + YG P+ + S++ + ++K R+
Sbjct: 175 -PIKWTAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 232
Query: 134 FPES 137
PE
Sbjct: 233 RPEG 236
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
Y V ++S VA+K + + ++ +FL +E V+K +KHPNL++ L
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFL-KEAAVMKEIKHPNLVQLLGVCT 79
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
YII+E+ G+LL+ +R+
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRE 102
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 67/133 (50%), Gaps = 6/133 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
QL+ A+ Y K VHRDI N+L+ +KL DFG +R Y ++T YK + +
Sbjct: 121 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKL--- 176
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVVFPE 136
+ +PE + +T SD+W GV ++ +++G PF ++++ +++ P
Sbjct: 177 PIKWMAPESINFRRFT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPM 235
Query: 137 SPRLSSSCKALIS 149
P + +L++
Sbjct: 236 PPNCPPTLYSLMT 248
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+A ++Y K +HRD+ N+L+ + +K++DFG AR +++ DY + +
Sbjct: 158 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYKKTTNGRL- 214
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK 130
+ +PE L YT QSD+WS GV+L+ + G P+ EL K +++
Sbjct: 215 PVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 267
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 241 EIEVVKGL-KHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIR 283
E+E++K + KH N+I L A +Y+I+EYA G+L E ++
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ 126
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 1 NDILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKY 60
N +L + K + ++AD + Y + VHRD+ N ++ + + +K+ DFG R
Sbjct: 129 NPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR-- 186
Query: 61 SVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLF 107
+ TDY + + + SPE LK +T SD+WS GVVL+
Sbjct: 187 DIYETDYYRKGGKGLL-PVRWMSPESLKDGVFT-TYSDVWSFGVVLW 231
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 69/124 (55%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q++ A++Y KK+ +HRD+ N L+ + + +K++DFG +R + Y + F
Sbjct: 118 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTYTAHAGAKF- 174
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE L ++ +SD+W+ GV+L+ + YG P+ + S++ + ++K R+
Sbjct: 175 -PIKWTAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 232
Query: 134 FPES 137
PE
Sbjct: 233 RPEG 236
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
Y V ++S VA+K + + ++ +FL +E V+K +KHPNL++ L
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFL-KEAAVMKEIKHPNLVQLLGVCT 79
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
YII E+ G+LL+ +R+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRE 102
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+A ++Y K +HRD+ N+L+ + +K++DFG AR +++ DY + +
Sbjct: 147 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYKKTTNGRL- 203
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK 130
+ +PE L YT QSD+WS GV+L+ + G P+ EL K +++
Sbjct: 204 PVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 256
Score = 34.7 bits (78), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 241 EIEVVKGL-KHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKER 286
E+E++K + KH N+I L A +Y+I+EYA G+L E ++ R
Sbjct: 72 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR 118
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 70/134 (52%), Gaps = 4/134 (2%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q++ + Y +K+ VHRD+ N+LL +++ K+SDFG ++ +++ Y + +
Sbjct: 118 QVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKW-- 175
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLF-AMVYGRLPFDDTNYSELLKQVQKRVVFPE 136
+ +PE + ++ +SD+WS GV ++ A+ YG+ P+ E++ +++
Sbjct: 176 PLKWYAPECINFRKFS-SRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMEC 234
Query: 137 SPRLSSSCKALISN 150
P AL+S+
Sbjct: 235 PPECPPELYALMSD 248
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 67/133 (50%), Gaps = 6/133 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
QL+ A+ Y K VHRDI N+L+ +KL DFG +R Y ++T YK + +
Sbjct: 147 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKL--- 202
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVVFPE 136
+ +PE + +T SD+W GV ++ +++G PF ++++ +++ P
Sbjct: 203 PIKWMAPESINFRRFT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPM 261
Query: 137 SPRLSSSCKALIS 149
P + +L++
Sbjct: 262 PPNCPPTLYSLMT 274
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 15/126 (11%)
Query: 22 AIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGSYAY 81
+ + H+ V+HRDIK +N+LL + +KL DFG + + ++ T ++N TF G+ +
Sbjct: 141 GLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ--LDRTVGRRN---TFIGTPYW 195
Query: 82 ASPEILKGVPYTPQ-----QSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPE 136
+PE++ P +SD+WS+G+ M G P D + L + +
Sbjct: 196 MAPEVI-ACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN----P 250
Query: 137 SPRLSS 142
+PRL S
Sbjct: 251 APRLKS 256
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 69/124 (55%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q++ A++Y KK+ +HRD+ N L+ + + +K++DFG +R + Y + F
Sbjct: 118 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTYTAHAGAKF- 174
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE L ++ +SD+W+ GV+L+ + YG P+ + S++ + ++K R+
Sbjct: 175 -PIKWTAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 232
Query: 134 FPES 137
PE
Sbjct: 233 RPEG 236
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
Y V ++S VA+K + + ++ +FL +E V+K +KHPNL++ L
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFL-KEAAVMKEIKHPNLVQLLGVCT 79
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
YII E+ G+LL+ +R+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRE 102
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 69/124 (55%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q++ A++Y KK+ +HRD+ N L+ + + +K++DFG +R + Y + F
Sbjct: 123 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTYTAHAGAKF- 179
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE L ++ +SD+W+ GV+L+ + YG P+ + S++ + ++K R+
Sbjct: 180 -PIKWTAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 237
Query: 134 FPES 137
PE
Sbjct: 238 RPEG 241
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
Y V ++S VA+K + + ++ +FL +E V+K +KHPNL++ L
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFL-KEAAVMKEIKHPNLVQLLGVCT 84
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
YII E+ G+LL+ +R+
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRE 107
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 69/124 (55%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q++ A++Y KK+ +HRD+ N L+ + + +K++DFG +R + Y + F
Sbjct: 118 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTYTAHAGAKF- 174
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE L ++ +SD+W+ GV+L+ + YG P+ + S++ + ++K R+
Sbjct: 175 -PIKWTAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 232
Query: 134 FPES 137
PE
Sbjct: 233 RPEG 236
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
Y V ++S VA+K + + ++ +FL +E V+K +KHPNL++ L
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFL-KEAAVMKEIKHPNLVQLLGVCT 79
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
YII E+ G+LL+ +R+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRE 102
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 69/124 (55%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q++ A++Y KK+ +HRD+ N L+ + + +K++DFG +R + Y + F
Sbjct: 120 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTYTAHAGAKF- 176
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE L ++ +SD+W+ GV+L+ + YG P+ + S++ + ++K R+
Sbjct: 177 -PIKWTAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 234
Query: 134 FPES 137
PE
Sbjct: 235 RPEG 238
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
Y V ++S VA+K + + ++ +FL +E V+K +KHPNL++ L
Sbjct: 26 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFL-KEAAVMKEIKHPNLVQLLGVCT 81
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
YII E+ G+LL+ +R+
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRE 104
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 1 NDILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKY 60
N +L + K + ++AD + Y + VHRD+ N ++ + + +K+ DFG R
Sbjct: 129 NPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR-- 186
Query: 61 SVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLF 107
+ TDY + + + SPE LK +T SD+WS GVVL+
Sbjct: 187 DIYETDYYRKGGKGLL-PVRWMSPESLKDGVFT-TYSDVWSFGVVLW 231
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 69/124 (55%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q++ A++Y KK+ +HRD+ N L+ + + +K++DFG +R + Y + F
Sbjct: 122 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTYTAHAGAKF- 178
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE L ++ +SD+W+ GV+L+ + YG P+ + S++ + ++K R+
Sbjct: 179 -PIKWTAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 236
Query: 134 FPES 137
PE
Sbjct: 237 RPEG 240
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
Y V ++S VA+K + + ++ +FL +E V+K +KHPNL++ L
Sbjct: 28 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFL-KEAAVMKEIKHPNLVQLLGVCT 83
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
YII E+ G+LL+ +R+
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRE 106
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 69/124 (55%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q++ A++Y KK+ +HRD+ N L+ + + +K++DFG +R + Y + F
Sbjct: 118 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTYTAHAGAKF- 174
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE L ++ +SD+W+ GV+L+ + YG P+ + S++ + ++K R+
Sbjct: 175 -PIKWTAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 232
Query: 134 FPES 137
PE
Sbjct: 233 RPEG 236
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
Y V ++S VA+K + + ++ +FL +E V+K +KHPNL++ L
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFL-KEAAVMKEIKHPNLVQLLGVCT 79
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
YII E+ G+LL+ +R+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRE 102
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 67/133 (50%), Gaps = 6/133 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
QL+ A+ Y K VHRDI N+L+ +KL DFG +R Y ++T YK + +
Sbjct: 122 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKL--- 177
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVVFPE 136
+ +PE + +T SD+W GV ++ +++G PF ++++ +++ P
Sbjct: 178 PIKWMAPESINFRRFT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPM 236
Query: 137 SPRLSSSCKALIS 149
P + +L++
Sbjct: 237 PPNCPPTLYSLMT 249
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 1 NDILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKY 60
N +L + K + ++AD + Y + VHRD+ N ++ + + +K+ DFG R
Sbjct: 122 NPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR-- 179
Query: 61 SVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLF 107
+ TDY + + + SPE LK +T SD+WS GVVL+
Sbjct: 180 DIYETDYYRKGGKGLL-PVRWMSPESLKDGVFT-TYSDVWSFGVVLW 224
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+A ++Y K +HRD+ N+L+ + +K++DFG AR +++ DY + +
Sbjct: 158 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYKKTTNGRL- 214
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK 130
+ +PE L YT QSD+WS GV+L+ + G P+ EL K +++
Sbjct: 215 PVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 267
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 241 EIEVVKGL-KHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALLCYSE 299
E+E++K + KH N+I L A +Y+I+EYA G+L E ++ R + CY+
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE---YCYNP 139
Query: 300 VSNLSQTFS-----RCCYQ 313
N + S C YQ
Sbjct: 140 SHNPEEQLSSKDLVSCAYQ 158
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 69/124 (55%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q++ A++Y KK+ +HRD+ N L+ + + +K++DFG +R + Y + F
Sbjct: 123 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTYTAHAGAKF- 179
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE L ++ +SD+W+ GV+L+ + YG P+ + S++ + ++K R+
Sbjct: 180 -PIKWTAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 237
Query: 134 FPES 137
PE
Sbjct: 238 RPEG 241
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
Y V ++S VA+K + + ++ +FL +E V+K +KHPNL++ L
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFL-KEAAVMKEIKHPNLVQLLGVCT 84
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
YII E+ G+LL+ +R+
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRE 107
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 69/124 (55%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q++ A++Y KK+ +HRD+ N L+ + + +K++DFG +R + Y + F
Sbjct: 120 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTYTAHAGAKF- 176
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE L ++ +SD+W+ GV+L+ + YG P+ + S++ + ++K R+
Sbjct: 177 -PIKWTAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 234
Query: 134 FPES 137
PE
Sbjct: 235 RPEG 238
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
Y V ++S VA+K + + ++ +FL +E V+K +KHPNL++ L
Sbjct: 26 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFL-KEAAVMKEIKHPNLVQLLGVCT 81
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
YII E+ G+LL+ +R+
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRE 104
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 69/124 (55%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q++ A++Y KK+ +HRD+ N L+ + + +K++DFG +R + Y + F
Sbjct: 123 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTYTAHAGAKF- 179
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE L ++ +SD+W+ GV+L+ + YG P+ + S++ + ++K R+
Sbjct: 180 -PIKWTAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 237
Query: 134 FPES 137
PE
Sbjct: 238 RPEG 241
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
Y V ++S VA+K + + ++ +FL +E V+K +KHPNL++ L
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFL-KEAAVMKEIKHPNLVQLLGVCT 84
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
YII+E+ G+LL+ +R+
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLRE 107
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 1 NDILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKY 60
N +L + K + ++AD + Y + VHRD+ N ++ + + +K+ DFG R
Sbjct: 122 NPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR-- 179
Query: 61 SVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLF 107
+ TDY + + + SPE LK +T SD+WS GVVL+
Sbjct: 180 DIYETDYYRKGGKGLL-PVRWMSPESLKDGVFT-TYSDVWSFGVVLW 224
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+A ++Y K +HRD+ N+L+ + +K++DFG AR +++ DY + +
Sbjct: 199 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYKKTTNGRL- 255
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK 130
+ +PE L YT QSD+WS GV+L+ + G P+ EL K +++
Sbjct: 256 PVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 308
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 241 EIEVVKGL-KHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKER 286
E+E++K + KH N+I L A +Y+I+EYA G+L E ++ R
Sbjct: 124 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR 170
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 1 NDILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKY 60
N +L + K + ++AD + Y + VHRD+ N ++ + + +K+ DFG R
Sbjct: 116 NPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR-- 173
Query: 61 SVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLF 107
+ TDY + + + SPE LK +T SD+WS GVVL+
Sbjct: 174 DIYETDYYRKGGKGLL-PVRWMSPESLKDGVFT-TYSDVWSFGVVLW 218
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 67/133 (50%), Gaps = 6/133 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
QL+ A+ Y K VHRDI N+L+ +KL DFG +R Y ++T YK + +
Sbjct: 499 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKL--- 554
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVVFPE 136
+ +PE + +T SD+W GV ++ +++G PF ++++ +++ P
Sbjct: 555 PIKWMAPESINFRRFT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPM 613
Query: 137 SPRLSSSCKALIS 149
P + +L++
Sbjct: 614 PPNCPPTLYSLMT 626
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 69/124 (55%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q++ A++Y KK+ +HRD+ N L+ + + +K++DFG +R + Y + F
Sbjct: 123 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTYTAHAGAKF- 179
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE L ++ +SD+W+ GV+L+ + YG P+ + S++ + ++K R+
Sbjct: 180 -PIKWTAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 237
Query: 134 FPES 137
PE
Sbjct: 238 RPEG 241
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
Y V ++S VA+K + + ++ +FL +E V+K +KHPNL++ L
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFL-KEAAVMKEIKHPNLVQLLGVCT 84
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
YII E+ G+LL+ +R+
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRE 107
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 1 NDILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKY 60
N +L + K + ++AD + Y + VHRD+ N ++ + + +K+ DFG R
Sbjct: 119 NPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR-- 176
Query: 61 SVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLF 107
+ TDY + + + SPE LK +T SD+WS GVVL+
Sbjct: 177 DIYETDYYRKGGKGLL-PVRWMSPESLKDGVFT-TYSDVWSFGVVLW 221
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 1 NDILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKY 60
N +L + K + ++AD + Y + VHRD+ N ++ + + +K+ DFG R
Sbjct: 120 NPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR-- 177
Query: 61 SVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLF 107
+ TDY + + + SPE LK +T SD+WS GVVL+
Sbjct: 178 DIYETDYYRKGGKGLL-PVRWMSPESLKDGVFT-TYSDVWSFGVVLW 222
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 1 NDILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKY 60
N +L + K + ++AD + Y + VHRD+ N ++ + + +K+ DFG R
Sbjct: 123 NPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR-- 180
Query: 61 SVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLF 107
+ TDY + + + SPE LK +T SD+WS GVVL+
Sbjct: 181 DIYETDYYRKGGKGLL-PVRWMSPESLKDGVFT-TYSDVWSFGVVLW 225
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+A + Y K VHRD+ N +LD+K+ +K++DFG AR N +
Sbjct: 140 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKL- 198
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTN 120
+ + E L+ +T +SD+WS GV+L+ M G P+ D N
Sbjct: 199 PVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVN 241
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 69/124 (55%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q++ A++Y KK+ +HRD+ N L+ + + +K++DFG +R + Y + F
Sbjct: 131 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTYTAHAGAKF- 187
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE L ++ +SD+W+ GV+L+ + YG P+ + S++ + ++K R+
Sbjct: 188 -PIKWTAPESLAYNKFSI-KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 245
Query: 134 FPES 137
PE
Sbjct: 246 RPEG 249
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
Y V ++S VA+K + + ++ +FL +E V+K +KHPNL++ L
Sbjct: 37 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFL-KEAAVMKEIKHPNLVQLLGVCT 92
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
YII E+ G+LL+ +R+
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRE 115
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+++AD + Y + K VHRD+ N ++ + +K+ DFG R + TDY + +
Sbjct: 137 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGLL 194
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSELLKQV 128
+ +PE LK +T SD+WS GVVL+ + P+ + ++LK V
Sbjct: 195 -PVRWMAPESLKDGVFT-TSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 245
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 1 NDILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKY 60
N +L + K + ++AD + Y + VHRD+ N ++ + + +K+ DFG R
Sbjct: 151 NPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR-- 208
Query: 61 SVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLF 107
+ TDY + + + SPE LK +T SD+WS GVVL+
Sbjct: 209 DIYETDYYRKGGKGLL-PVRWMSPESLKDGVFT-TYSDVWSFGVVLW 253
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+++AD + Y + K VHRD+ N ++ + +K+ DFG R + TDY + +
Sbjct: 136 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGLL 193
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSELLKQV 128
+ +PE LK +T SD+WS GVVL+ + P+ + ++LK V
Sbjct: 194 -PVRWMAPESLKDGVFT-TSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 244
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 67/133 (50%), Gaps = 6/133 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
QL+ A+ Y K VHRDI N+L+ +KL DFG +R Y ++T YK + +
Sbjct: 119 QLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKL--- 174
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVVFPE 136
+ +PE + +T SD+W GV ++ +++G PF ++++ +++ P
Sbjct: 175 PIKWMAPESINFRRFT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPM 233
Query: 137 SPRLSSSCKALIS 149
P + +L++
Sbjct: 234 PPNCPPTLYSLMT 246
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 67/133 (50%), Gaps = 7/133 (5%)
Query: 3 ILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSV 62
I ++ + ++ Q+ I + H ++HRD+K N+++ +K+ DFG AR
Sbjct: 119 IQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 178
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS 122
+ ++ Y Y +PE++ G+ Y + DIWS+G ++ M+ G + F T++
Sbjct: 179 SFM-----MTPEVVTRY-YRAPEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
Query: 123 ELLKQVQKRVVFP 135
+ +V +++ P
Sbjct: 232 DQWNKVIEQLGTP 244
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 56/100 (56%), Gaps = 7/100 (7%)
Query: 12 ARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNL 71
A F Q+ +DY H K ++HRD+K N+ L D +K+ DFG S+ N D K+
Sbjct: 138 ALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLV--TSLKN-DGKRTR 194
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVY 111
S+ G+ Y SPE + Y ++ D++++G++L +++
Sbjct: 195 SK---GTLRYMSPEQISSQDY-GKEVDLYALGLILAELLH 230
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 67/133 (50%), Gaps = 6/133 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
QL+ A+ Y K VHRDI N+L+ +KL DFG +R Y ++T YK + +
Sbjct: 499 QLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKL--- 554
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVVFPE 136
+ +PE + +T SD+W GV ++ +++G PF ++++ +++ P
Sbjct: 555 PIKWMAPESINFRRFT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPM 613
Query: 137 SPRLSSSCKALIS 149
P + +L++
Sbjct: 614 PPNCPPTLYSLMT 626
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q++ A++Y KK+ +HRD+ N L+ + + +K++DFG +R + Y + F
Sbjct: 137 TQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSR--LMTGDTYTAHAGAKF- 193
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE L ++ +SD+W+ GV+L+ + YG P+ + S++ ++K R+
Sbjct: 194 -PIKWTAPESLAYNTFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRME 251
Query: 134 FPES 137
PE
Sbjct: 252 QPEG 255
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
Y V + ++S VA+K + + ++ +FL +E V+K +KHPNL++ L
Sbjct: 43 GQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE---EFL-KEAAVMKEIKHPNLVQLLGVCT 98
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
YI+ EY G+LL+ +R+
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRE 121
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 66/133 (49%), Gaps = 7/133 (5%)
Query: 3 ILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSV 62
I ++ + ++ Q+ I + H ++HRD+K N+++ +K+ DFG AR
Sbjct: 119 IQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR---- 174
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS 122
T + + + Y +PE++ G+ Y + DIWS+G ++ MV ++ F +Y
Sbjct: 175 --TAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYI 231
Query: 123 ELLKQVQKRVVFP 135
+ +V +++ P
Sbjct: 232 DQWNKVIEQLGTP 244
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 2/120 (1%)
Query: 1 NDILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKY 60
+++L+ + + +R L + + Y H+ ++HRD+K N+L+ +KL+DFG AR +
Sbjct: 116 SNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAF 175
Query: 61 SVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTN 120
S+ + N + Y PE+L G D+W G ++ A ++ R P N
Sbjct: 176 SLAKNS-QPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIM-AEMWTRSPIMQGN 233
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 66/133 (49%), Gaps = 7/133 (5%)
Query: 3 ILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSV 62
I ++ + ++ Q+ I + H ++HRD+K N+++ +K+ DFG AR
Sbjct: 119 IQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR---- 174
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS 122
T + + + Y +PE++ G+ Y + DIWS+G ++ MV ++ F +Y
Sbjct: 175 --TAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYI 231
Query: 123 ELLKQVQKRVVFP 135
+ +V +++ P
Sbjct: 232 DQWNKVIEQLGTP 244
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q++ A++Y KK+ +HRD+ N L+ + + +K++DFG +R + Y F
Sbjct: 120 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTYTAPAGAKF- 176
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE L ++ +SD+W+ GV+L+ + YG P+ + S++ + ++K R+
Sbjct: 177 -PIKWTAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 234
Query: 134 FPES 137
PE
Sbjct: 235 RPEG 238
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
Y V ++S VA+K + + ++ +FL +E V+K +KHPNL++ L
Sbjct: 26 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFL-KEAAVMKEIKHPNLVQLLGVCT 81
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
YII E+ G+LL+ +R+
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRE 104
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q++ A++Y KK+ +HRD+ N L+ + + +K++DFG +R + Y F
Sbjct: 119 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTYTAPAGAKF- 175
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE L ++ +SD+W+ GV+L+ + YG P+ + S++ + ++K R+
Sbjct: 176 -PIKWTAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 233
Query: 134 FPES 137
PE
Sbjct: 234 RPEG 237
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
Y V ++S VA+K + + ++ +FL +E V+K +KHPNL++ L
Sbjct: 25 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFL-KEAAVMKEIKHPNLVQLLGVCT 80
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
YII E+ G+LL+ +R+
Sbjct: 81 REPPFYIITEFMTYGNLLDYLRE 103
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 2/120 (1%)
Query: 1 NDILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKY 60
+++L+ + + +R L + + Y H+ ++HRD+K N+L+ +KL+DFG AR +
Sbjct: 115 SNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAF 174
Query: 61 SVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTN 120
S+ + N + Y PE+L G D+W G ++ A ++ R P N
Sbjct: 175 SLAKNS-QPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIM-AEMWTRSPIMQGN 232
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 12/105 (11%)
Query: 16 FSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTD--------- 66
F Q+A+A+++ H K ++HRD+K N+ +K+ DFG + +
Sbjct: 124 FLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 67 YKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVY 111
Y ++ + G+ Y SPE + G Y+ + DI+S+G++LF ++Y
Sbjct: 184 YARHTGQV--GTKLYMSPEQIHGNSYS-HKVDIFSLGLILFELLY 225
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 10/107 (9%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLD---DKYNIKLSDFGFARKYSVNNTDYKQ 69
R S ++ A+ Y H+ ++HRD+K EN++L + K+ D G+A++ +
Sbjct: 125 RTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD------QG 178
Query: 70 NLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF 116
L F G+ Y +PE+L+ YT D WS G + F + G PF
Sbjct: 179 ELCTEFVGTLQYLAPELLEQKKYT-VTVDYWSFGTLAFECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 10/107 (9%)
Query: 13 RRWFSQLADAIDYCHKKSVVHRDIKCENLLLD---DKYNIKLSDFGFARKYSVNNTDYKQ 69
R S ++ A+ Y H+ ++HRD+K EN++L + K+ D G+A++ +
Sbjct: 124 RTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD------QG 177
Query: 70 NLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF 116
L F G+ Y +PE+L+ YT D WS G + F + G PF
Sbjct: 178 ELCTEFVGTLQYLAPELLEQKKYT-VTVDYWSFGTLAFECITGFRPF 223
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 96/227 (42%), Gaps = 51/227 (22%)
Query: 3 ILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSV 62
I ++ + ++ Q+ I + H ++HRD+K N+++ +K+ DFG AR
Sbjct: 113 IQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---- 168
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNY- 121
T + + + Y +PE++ G+ Y + DIWS+G ++ MV ++ F +Y
Sbjct: 169 --TAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYI 225
Query: 122 --------------SELLKQVQKRV-----------------VFPES--PRLS------- 141
E +K++Q V +FP+S P S
Sbjct: 226 DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKA 285
Query: 142 SSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
S + L+S +L P K RI ++D Q P++ +P P++
Sbjct: 286 SQARDLLSKMLVIDPAK-RISVDDALQHPYINVWYDPAEVEAPPPQI 331
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 96/227 (42%), Gaps = 51/227 (22%)
Query: 3 ILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSV 62
I ++ + ++ Q+ I + H ++HRD+K N+++ +K+ DFG AR
Sbjct: 112 IQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---- 167
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNY- 121
T + + + Y +PE++ G+ Y + DIWS+G ++ MV ++ F +Y
Sbjct: 168 --TAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYI 224
Query: 122 --------------SELLKQVQKRV-----------------VFPES--PRLS------- 141
E +K++Q V +FP+S P S
Sbjct: 225 DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKA 284
Query: 142 SSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
S + L+S +L P K RI ++D Q P++ +P P++
Sbjct: 285 SQARDLLSKMLVIDPAK-RISVDDALQHPYINVWYDPAEVEAPPPQI 330
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 96/227 (42%), Gaps = 51/227 (22%)
Query: 3 ILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSV 62
I ++ + ++ Q+ I + H ++HRD+K N+++ +K+ DFG AR
Sbjct: 113 IQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---- 168
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNY- 121
T + + + Y +PE++ G+ Y + DIWS+G ++ MV ++ F +Y
Sbjct: 169 --TAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYI 225
Query: 122 --------------SELLKQVQKRV-----------------VFPES--PRLS------- 141
E +K++Q V +FP+S P S
Sbjct: 226 DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKA 285
Query: 142 SSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
S + L+S +L P K RI ++D Q P++ +P P++
Sbjct: 286 SQARDLLSKMLVIDPAK-RISVDDALQHPYINVWYDPAEVEAPPPQI 331
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 2/120 (1%)
Query: 1 NDILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKY 60
+++L+ + + +R L + + Y H+ ++HRD+K N+L+ +KL+DFG AR +
Sbjct: 116 SNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAF 175
Query: 61 SVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTN 120
S+ + N + Y PE+L G D+W G ++ A ++ R P N
Sbjct: 176 SLAKNS-QPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIM-AEMWTRSPIMQGN 233
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 96/227 (42%), Gaps = 51/227 (22%)
Query: 3 ILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSV 62
I ++ + ++ Q+ I + H ++HRD+K N+++ +K+ DFG AR
Sbjct: 119 IQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---- 174
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNY- 121
T + + + Y +PE++ G+ Y + DIWS+G ++ MV ++ F +Y
Sbjct: 175 --TAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYI 231
Query: 122 --------------SELLKQVQKRV-----------------VFPES--PRLS------- 141
E +K++Q V +FP+S P S
Sbjct: 232 DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKA 291
Query: 142 SSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
S + L+S +L P K RI ++D Q P++ +P P++
Sbjct: 292 SQARDLLSKMLVIDPAK-RISVDDALQHPYINVWYDPAEVEAPPPQI 337
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 2/120 (1%)
Query: 1 NDILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKY 60
+++L+ + + +R L + + Y H+ ++HRD+K N+L+ +KL+DFG AR +
Sbjct: 116 SNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAF 175
Query: 61 SVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTN 120
S+ + N + Y PE+L G D+W G ++ A ++ R P N
Sbjct: 176 SLAKNS-QPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIM-AEMWTRSPIMQGN 233
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 96/227 (42%), Gaps = 51/227 (22%)
Query: 3 ILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSV 62
I ++ + ++ Q+ I + H ++HRD+K N+++ +K+ DFG AR
Sbjct: 120 IQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---- 175
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNY- 121
T + + + Y +PE++ G+ Y + DIWS+G ++ MV ++ F +Y
Sbjct: 176 --TAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYI 232
Query: 122 --------------SELLKQVQKRV-----------------VFPES--PRLS------- 141
E +K++Q V +FP+S P S
Sbjct: 233 DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKA 292
Query: 142 SSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
S + L+S +L P K RI ++D Q P++ +P P++
Sbjct: 293 SQARDLLSKMLVIDPAK-RISVDDALQHPYINVWYDPAEVEAPPPQI 338
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 96/227 (42%), Gaps = 51/227 (22%)
Query: 3 ILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSV 62
I ++ + ++ Q+ I + H ++HRD+K N+++ +K+ DFG AR
Sbjct: 119 IQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---- 174
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNY- 121
T + + + Y +PE++ G+ Y + DIWS+G ++ MV ++ F +Y
Sbjct: 175 --TAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYI 231
Query: 122 --------------SELLKQVQKRV-----------------VFPES--PRLS------- 141
E +K++Q V +FP+S P S
Sbjct: 232 DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKA 291
Query: 142 SSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
S + L+S +L P K RI ++D Q P++ +P P++
Sbjct: 292 SQARDLLSKMLVIDPAK-RISVDDALQHPYINVWYDPAEVEAPPPQI 337
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 96/227 (42%), Gaps = 51/227 (22%)
Query: 3 ILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSV 62
I ++ + ++ Q+ I + H ++HRD+K N+++ +K+ DFG AR
Sbjct: 118 IQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---- 173
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNY- 121
T + + + Y +PE++ G+ Y + DIWS+G ++ MV ++ F +Y
Sbjct: 174 --TAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYI 230
Query: 122 --------------SELLKQVQKRV-----------------VFPES--PRLS------- 141
E +K++Q V +FP+S P S
Sbjct: 231 DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKA 290
Query: 142 SSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
S + L+S +L P K RI ++D Q P++ +P P++
Sbjct: 291 SQARDLLSKMLVIDPAK-RISVDDALQHPYINVWYDPAEVEAPPPQI 336
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 1 NDILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKY 60
N +L + K + ++AD + Y + VHRD+ N ++ + + +K+ DFG R
Sbjct: 114 NPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR-- 171
Query: 61 SVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLF 107
+ TD + + + SPE LK +T SD+WS GVVL+
Sbjct: 172 DIXETDXXRKGGKGLL-PVRWMSPESLKDGVFT-TYSDVWSFGVVLW 216
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 96/227 (42%), Gaps = 51/227 (22%)
Query: 3 ILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSV 62
I ++ + ++ Q+ I + H ++HRD+K N+++ +K+ DFG AR
Sbjct: 157 IQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---- 212
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNY- 121
T + + + Y +PE++ G+ Y + DIWS+G ++ MV ++ F +Y
Sbjct: 213 --TAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYI 269
Query: 122 --------------SELLKQVQKRV-----------------VFPES--PRLS------- 141
E +K++Q V +FP+S P S
Sbjct: 270 DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKA 329
Query: 142 SSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
S + L+S +L P K RI ++D Q P++ +P P++
Sbjct: 330 SQARDLLSKMLVIDPAK-RISVDDALQHPYINVWYDPAEVEAPPPQI 375
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+A + Y + VHRD+ N L+ + +K+ DFG +R V +TDY + T
Sbjct: 136 QIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSR--DVYSTDYYRVGGHTML- 192
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQV-QKRVVFP 135
+ PE + +T +SD+WS+GVVL+ + YG+ P+ + +E+++ + Q RV+
Sbjct: 193 PIRWMPPESIMYRKFT-TESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVL-- 249
Query: 136 ESPR 139
+ PR
Sbjct: 250 QRPR 253
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 34/67 (50%)
Query: 217 QDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNG 276
QD + + ++ D +K RE E++ L+H ++++F + ++ EY K+G
Sbjct: 41 QDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHG 100
Query: 277 SLLEVIR 283
L + +R
Sbjct: 101 DLNKFLR 107
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 1 NDILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKY 60
N +L + K + ++AD + Y + VHRD+ N + + + +K+ DFG R
Sbjct: 116 NPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTR-- 173
Query: 61 SVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLF 107
+ TDY + + + SPE LK +T SD+WS GVVL+
Sbjct: 174 DIYETDYYRKGGKGLL-PVRWMSPESLKDGVFT-TYSDVWSFGVVLW 218
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 96/227 (42%), Gaps = 51/227 (22%)
Query: 3 ILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSV 62
I ++ + ++ Q+ I + H ++HRD+K N+++ +K+ DFG AR
Sbjct: 120 IQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---- 175
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNY- 121
T + + + Y +PE++ G+ Y + DIWS+G ++ MV ++ F +Y
Sbjct: 176 --TAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYI 232
Query: 122 --------------SELLKQVQKRV-----------------VFPES--PRLS------- 141
E +K++Q V +FP+S P S
Sbjct: 233 DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKA 292
Query: 142 SSCKALISNIL--SPVKFRIQMEDIRQDPWLKEDSNPVGKSKSAPEV 186
S + L+S +L P K RI ++D Q P++ +P P++
Sbjct: 293 SQARDLLSKMLVIDPAK-RISVDDALQHPYINVWYDPAEVEAPPPQI 338
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 72/154 (46%), Gaps = 15/154 (9%)
Query: 3 ILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSV 62
I ++ + ++ Q+ I + H ++HRD+K N+++ +K+ DFG AR
Sbjct: 119 IQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---- 174
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS 122
T + E + Y +PE++ G+ Y + DIWS+G ++ MV ++ F +Y
Sbjct: 175 --TAGTSFMMEPEVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVCHKILFPGRDYI 231
Query: 123 ELLKQVQKRVVFPESPRLSSSCKALISNILSPVK 156
+ +V + +L + C A + + V+
Sbjct: 232 DQWNKVIE--------QLGTPCPAFMKKLQPTVR 257
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 5/113 (4%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+++AD + Y + K VHRD+ N ++ + +K+ DFG R + TD + +
Sbjct: 134 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXRKGGKGLL 191
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSELLKQV 128
+ +PE LK +T SD+WS GVVL+ + P+ + ++LK V
Sbjct: 192 -PVRWMAPESLKDGVFT-TSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 242
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 63/124 (50%), Gaps = 3/124 (2%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLD-DKYNIKLSDFGFARKYSVNNTDYK 68
+ AR + QL + Y H +V+HRD+K NL ++ + +K+ DFG AR + + +K
Sbjct: 120 EHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYS-HK 178
Query: 69 QNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQV 128
+LSE + Y SP +L + D+W+ G + M+ G+ F + E ++ +
Sbjct: 179 GHLSEGLVTKW-YRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLI 237
Query: 129 QKRV 132
+ +
Sbjct: 238 LESI 241
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 5/113 (4%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+++AD + Y + K VHRD+ N ++ + +K+ DFG R + TD + +
Sbjct: 137 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXRKGGKGLL 194
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSELLKQV 128
+ +PE LK +T SD+WS GVVL+ + P+ + ++LK V
Sbjct: 195 -PVRWMAPESLKDGVFT-TSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 245
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 5/113 (4%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+++AD + Y + K VHRD+ N ++ + +K+ DFG R + TD + +
Sbjct: 137 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXRKGGKGLL 194
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSELLKQV 128
+ +PE LK +T SD+WS GVVL+ + P+ + ++LK V
Sbjct: 195 -PVRWMAPESLKDGVFT-TSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 245
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 1 NDILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKY 60
N +L + K + ++AD + Y + VHRD+ N ++ + + +K+ DFG R
Sbjct: 123 NPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR-- 180
Query: 61 SVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLF 107
+ TD + + + SPE LK +T SD+WS GVVL+
Sbjct: 181 DIXETDXXRKGGKGLL-PVRWMSPESLKDGVFT-TYSDVWSFGVVLW 225
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 66/133 (49%), Gaps = 7/133 (5%)
Query: 3 ILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSV 62
I ++ + ++ Q+ I + H ++HRD+K N+++ +K+ DFG AR
Sbjct: 157 IQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---- 212
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS 122
T + + + Y +PE++ G+ Y + DIWS+G ++ MV ++ F +Y
Sbjct: 213 --TAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYI 269
Query: 123 ELLKQVQKRVVFP 135
+ +V +++ P
Sbjct: 270 DQWNKVIEQLGTP 282
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 70/134 (52%), Gaps = 4/134 (2%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q++ + Y +K+ VHR++ N+LL +++ K+SDFG ++ +++ Y + +
Sbjct: 444 QVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKW-- 501
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLF-AMVYGRLPFDDTNYSELLKQVQKRVVFPE 136
+ +PE + ++ +SD+WS GV ++ A+ YG+ P+ E++ +++
Sbjct: 502 PLKWYAPECINFRKFS-SRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMEC 560
Query: 137 SPRLSSSCKALISN 150
P AL+S+
Sbjct: 561 PPECPPELYALMSD 574
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 14/106 (13%)
Query: 16 FSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETF 75
F Q+A+A+++ H K ++HRD+K N+ +K+ DFG + + D ++ T
Sbjct: 170 FIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLV---TAMDQDEEEQTVLTP 226
Query: 76 CGSYA----------YASPEILKGVPYTPQQSDIWSMGVVLFAMVY 111
+YA Y SPE + G Y+ + DI+S+G++LF ++Y
Sbjct: 227 MPAYATHXGQVGTKLYMSPEQIHGNNYS-HKVDIFSLGLILFELLY 271
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
QL+ A+ Y K VHRDI N+L+ +KL DFG +R Y ++T K + +
Sbjct: 119 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTXXKASKGKL--- 174
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVVFPE 136
+ +PE + +T SD+W GV ++ +++G PF ++++ +++ P
Sbjct: 175 PIKWMAPESINFRRFT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPM 233
Query: 137 SPRLSSSCKALIS 149
P + +L++
Sbjct: 234 PPNCPPTLYSLMT 246
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 69/124 (55%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q++ A++Y KK+ +HR++ N L+ + + +K++DFG +R + Y + F
Sbjct: 325 TQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKF- 381
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE L ++ +SD+W+ GV+L+ + YG P+ + S++ + ++K R+
Sbjct: 382 -PIKWTAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 439
Query: 134 FPES 137
PE
Sbjct: 440 RPEG 443
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 204 YATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETT 263
Y V ++S VA+K + + ++ +FL +E V+K +KHPNL++ L
Sbjct: 233 YGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFL-KEAAVMKEIKHPNLVQLLGVCTRE 288
Query: 264 HRVYIIMEYAKNGSLLEVIRK 284
YII E+ G+LL+ +R+
Sbjct: 289 PPFYIITEFMTYGNLLDYLRE 309
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFAR---KYSVNNTD 66
D + + Q A+ H +V+HRD+K NLL++ ++K+ DFG AR + + +N++
Sbjct: 112 DHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 67 --YKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSEL 124
+Q+ F + Y +PE++ + D+WS G +L + R F +Y
Sbjct: 172 PTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ 231
Query: 125 LKQVQKRVVFP---------ESPRLSSSCKALISNILSPVK 156
L + + P ESPR K+L +P++
Sbjct: 232 LLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLE 272
Score = 34.7 bits (78), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQ--- 258
+Y V AT + VAIK I P+ L+ REI+++K KH N+I
Sbjct: 22 GAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL--REIKILKHFKHENIITIFNIQR 79
Query: 259 --AIETTHRVYIIME 271
+ E + VYII E
Sbjct: 80 PDSFENFNEVYIIQE 94
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 76/139 (54%), Gaps = 14/139 (10%)
Query: 1 NDILLDYNTDKARRWFSQ--------LADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLS 52
N LL+Y + R+ +Q + +A++Y K +HRD+ N L++D+ +K+S
Sbjct: 103 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVS 162
Query: 53 DFGFARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-Y 111
DFG +R Y +++ + ++ F ++ PE+L ++ +SDIW+ GV+++ +
Sbjct: 163 DFGLSR-YVLDDEE-TSSVGSKF--PVRWSPPEVLMYSKFS-SKSDIWAFGVLMWEIYSL 217
Query: 112 GRLPFDDTNYSELLKQVQK 130
G++P++ SE + + +
Sbjct: 218 GKMPYERFTNSETAEHIAQ 236
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 214 RHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYA 273
R DVAIK+I + D +F+ E +V+ L H L++ ++II EY
Sbjct: 46 RGQYDVAIKMIKEGSMSED---EFI-EEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101
Query: 274 KNGSLLEVIRKERYIDEDKALL 295
NG LL +R+ R+ + + LL
Sbjct: 102 ANGCLLNYLREMRHRFQTQQLL 123
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 24/139 (17%)
Query: 2 DILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN-IKLSDFGFARKY 60
DIL + + R + L A+ H+ +VHRD+K N L + + L DFG A+
Sbjct: 109 DILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGT 168
Query: 61 S---------VNNTDYKQNLSETFC--------------GSYAYASPEILKGVPYTPQQS 97
V + ++ S+ C G+ + +PE+L P
Sbjct: 169 HDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAI 228
Query: 98 DIWSMGVVLFAMVYGRLPF 116
D+WS GV+ +++ GR PF
Sbjct: 229 DMWSAGVIFLSLLSGRYPF 247
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 69/124 (55%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q++ A++Y KK+ +HR++ N L+ + + +K++DFG +R + Y + F
Sbjct: 322 TQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKF- 378
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE L ++ +SD+W+ GV+L+ + YG P+ + S++ + ++K R+
Sbjct: 379 -PIKWTAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 436
Query: 134 FPES 137
PE
Sbjct: 437 RPEG 440
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
Y V ++S VA+K + + ++ +FL +E V+K +KHPNL++ L
Sbjct: 228 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFL-KEAAVMKEIKHPNLVQLLGVCT 283
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
YII E+ G+LL+ +R+
Sbjct: 284 REPPFYIITEFMTYGNLLDYLRE 306
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 69/124 (55%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q++ A++Y KK+ +HR++ N L+ + + +K++DFG +R + Y + F
Sbjct: 364 TQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKF- 420
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE L ++ +SD+W+ GV+L+ + YG P+ + S++ + ++K R+
Sbjct: 421 -PIKWTAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 478
Query: 134 FPES 137
PE
Sbjct: 479 RPEG 482
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
Y V ++S VA+K + + ++ +FL +E V+K +KHPNL++ L
Sbjct: 270 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFL-KEAAVMKEIKHPNLVQLLGVCT 325
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
YII E+ G+LL+ +R+
Sbjct: 326 REPPFYIITEFMTYGNLLDYLRE 348
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 60/114 (52%), Gaps = 5/114 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+A ++Y K +HRD+ N+L+ + +K++DFG AR +++ D + +
Sbjct: 158 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDXXKKTTNGRL- 214
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK 130
+ +PE L YT QSD+WS GV+L+ + G P+ EL K +++
Sbjct: 215 PVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 267
Score = 34.7 bits (78), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 241 EIEVVKGL-KHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKER 286
E+E++K + KH N+I L A +Y+I+EYA G+L E ++ R
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR 129
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 69/124 (55%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q++ A++Y KK+ +HRD+ N L+ + + +K++DFG +R + + + F
Sbjct: 116 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTFTAHAGAKF- 172
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE L ++ +SD+W+ GV+L+ + YG P+ + S++ + ++K R+
Sbjct: 173 -PIKWTAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRME 230
Query: 134 FPES 137
PE
Sbjct: 231 RPEG 234
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
Y V ++S VA+K + + ++ +FL +E V+K +KHPNL++ L
Sbjct: 22 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFL-KEAAVMKEIKHPNLVQLLGVCT 77
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
YII E+ G+LL+ +R+
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRE 100
>pdb|2JII|A Chain A, Structure Of Vaccinia Related Kinase 3
pdb|2JII|B Chain B, Structure Of Vaccinia Related Kinase 3
Length = 352
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLD--DKYNIKLSDFGFARKY--SVNNTDYKQNLSE 73
+L DA+++ H+ VH ++ EN+ +D D+ + L+ +GFA +Y S + Y +
Sbjct: 167 RLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRS 226
Query: 74 TFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDD--TNYSELLKQVQKR 131
G + S ++ KG + ++SD+ S+G + +YG LP+ + N +++KQ QK
Sbjct: 227 PHEGDLEFISMDLHKGCGPS-RRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKF 285
Query: 132 VVFP 135
V P
Sbjct: 286 VDKP 289
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+++AD + Y + K VHR++ N ++ + +K+ DFG R + TDY + +
Sbjct: 138 AEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGLL 195
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSELLKQV 128
+ +PE LK +T SD+WS GVVL+ + P+ + ++LK V
Sbjct: 196 -PVRWMAPESLKDGVFT-TSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 246
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+++AD + Y + K VHR++ N ++ + +K+ DFG R + TDY + +
Sbjct: 137 AEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGLL 194
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSELLKQV 128
+ +PE LK +T SD+WS GVVL+ + P+ + ++LK V
Sbjct: 195 -PVRWMAPESLKDGVFT-TSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 245
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q++ + Y + + VHRD+ N+LL ++ K+SDFG ++ + YK +
Sbjct: 119 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKW-- 176
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLF-AMVYGRLPFDDTNYSELLKQVQK 130
+ +PE + ++ +SD+WS GV+++ A YG+ P+ SE+ ++K
Sbjct: 177 PVKWYAPECINYYKFS-SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 229
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 66/133 (49%), Gaps = 7/133 (5%)
Query: 3 ILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSV 62
I ++ + ++ Q+ I + H ++HRD+K N+++ +K+ DFG AR
Sbjct: 119 IQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---- 174
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS 122
T + E + Y +PE++ G+ Y + D+WS+G ++ MV ++ F +Y
Sbjct: 175 --TAGTSFMMEPEVVTRYYRAPEVILGMGYK-ENVDLWSVGCIMGEMVCHKILFPGRDYI 231
Query: 123 ELLKQVQKRVVFP 135
+ +V +++ P
Sbjct: 232 DQWNKVIEQLGTP 244
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 66/133 (49%), Gaps = 7/133 (5%)
Query: 3 ILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSV 62
I ++ + ++ Q+ I + H ++HRD+K N+++ +K+ DFG AR
Sbjct: 113 IQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---- 168
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS 122
T + + + Y +PE++ G+ Y + D+WS+G ++ MV ++ F +Y
Sbjct: 169 --TAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDLWSVGCIMGEMVCHKILFPGRDYI 225
Query: 123 ELLKQVQKRVVFP 135
+ +V +++ P
Sbjct: 226 DQWNKVIEQLGTP 238
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 66/133 (49%), Gaps = 7/133 (5%)
Query: 3 ILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSV 62
I ++ + ++ Q+ I + H ++HRD+K N+++ +K+ DFG AR
Sbjct: 124 IQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---- 179
Query: 63 NNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYS 122
T + + + Y +PE++ G+ Y + D+WS+G ++ MV ++ F +Y
Sbjct: 180 --TAGTSFMMTPYVVTRYYRAPEVILGMGYK-ENVDLWSVGCIMGEMVCHKILFPGRDYI 236
Query: 123 ELLKQVQKRVVFP 135
+ +V +++ P
Sbjct: 237 DQWNKVIEQLGTP 249
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 54/95 (56%), Gaps = 8/95 (8%)
Query: 24 DYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQ-NLSETFCGSYAYA 82
D+C K ++HRD+K N+LLD+++ + DFG A+ DYK ++ G+ +
Sbjct: 157 DHCDPK-IIHRDVKAANILLDEEFEAVVGDFGLAKL-----MDYKDXHVXXAVRGTIGHI 210
Query: 83 SPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFD 117
+PE L + +++D++ GV+L ++ G+ FD
Sbjct: 211 APEYLS-TGKSSEKTDVFGYGVMLLELITGQRAFD 244
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 67/131 (51%), Gaps = 18/131 (13%)
Query: 1 NDILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKY 60
D LL ++ D + +A++Y + VHRD+ N+L+ + K+SDFG ++
Sbjct: 107 GDCLLKFSLD--------VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 158
Query: 61 SVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDT 119
S K + + +PE L+ ++ +SD+WS G++L+ + +GR+P+
Sbjct: 159 SSTQDTGKLPVK--------WTAPEALREAAFS-TKSDVWSFGILLWEIYSFGRVPYPRI 209
Query: 120 NYSELLKQVQK 130
+++ +V+K
Sbjct: 210 PLKDVVPRVEK 220
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 241 EIEVVKGLKHPNLIRFLQAI-ETTHRVYIIMEYAKNGSLLEVIR-KERYIDEDKALLCYS 298
E V+ L+H NL++ L I E +YI+ EY GSL++ +R + R + LL +S
Sbjct: 55 EASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS 114
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q++ + Y + + VHRD+ N+LL ++ K+SDFG ++ + YK +
Sbjct: 478 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW-- 535
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLF-AMVYGRLPFDDTNYSELLKQVQK 130
+ +PE + ++ +SD+WS GV+++ A YG+ P+ SE+ ++K
Sbjct: 536 PVKWYAPECINYYKFS-SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 588
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 69/124 (55%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q++ A++Y KK+ +HRD+ N L+ + + +K++DFG +R + + + F
Sbjct: 119 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKF- 175
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE L ++ +SD+W+ GV+L+ + YG P+ + S++ + ++K R+
Sbjct: 176 -PIKWTAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 233
Query: 134 FPES 137
PE
Sbjct: 234 RPEG 237
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
Y V ++S VA+K + + ++ +FL +E V+K +KHPNL++ L
Sbjct: 25 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFL-KEAAVMKEIKHPNLVQLLGVCT 80
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
YII+E+ G+LL+ +R+
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRE 103
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q++ + Y + + VHRD+ N+LL ++ K+SDFG ++ + YK +
Sbjct: 477 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW-- 534
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLF-AMVYGRLPFDDTNYSELLKQVQK 130
+ +PE + ++ +SD+WS GV+++ A YG+ P+ SE+ ++K
Sbjct: 535 PVKWYAPECINYYKFS-SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 587
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFAR---KYSVNNTD 66
D + + Q A+ H +V+HRD+K NLL++ ++K+ DFG AR + + +N++
Sbjct: 112 DHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 67 --YKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSEL 124
+Q+ + + Y +PE++ + D+WS G +L + R F +Y
Sbjct: 172 PTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ 231
Query: 125 LKQVQKRVVFP---------ESPRLSSSCKALISNILSPVK 156
L + + P ESPR K+L +P++
Sbjct: 232 LLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLE 272
Score = 34.7 bits (78), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQ--- 258
+Y V AT + VAIK I P+ L+ REI+++K KH N+I
Sbjct: 22 GAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL--REIKILKHFKHENIITIFNIQR 79
Query: 259 --AIETTHRVYIIME 271
+ E + VYII E
Sbjct: 80 PDSFENFNEVYIIQE 94
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 69/124 (55%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q++ A++Y KK+ +HRD+ N L+ + + +K++DFG +R + + + F
Sbjct: 123 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKF- 179
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE L ++ +SD+W+ GV+L+ + YG P+ + S++ + ++K R+
Sbjct: 180 -PIKWTAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 237
Query: 134 FPES 137
PE
Sbjct: 238 RPEG 241
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
Y V ++S VA+K + + ++ +FL +E V+K +KHPNL++ L
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFL-KEAAVMKEIKHPNLVQLLGVCT 84
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
YII E+ G+LL+ +R+
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRE 107
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q++ + Y + + VHRD+ N+LL ++ K+SDFG ++ + YK +
Sbjct: 125 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW-- 182
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLF-AMVYGRLPFDDTNYSELLKQVQK 130
+ +PE + ++ +SD+WS GV+++ A YG+ P+ SE+ ++K
Sbjct: 183 PVKWYAPECINYYKFS-SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 235
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q++ + Y + + VHRD+ N+LL ++ K+SDFG ++ + YK +
Sbjct: 133 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW-- 190
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLF-AMVYGRLPFDDTNYSELLKQVQK 130
+ +PE + ++ +SD+WS GV+++ A YG+ P+ SE+ ++K
Sbjct: 191 PVKWYAPECINYYKFS-SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 243
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 7/122 (5%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNI-KLSDFGFARKYSVNNTDYKQNLSE 73
+ QL ++ Y H + HRDIK +NLLLD + KL DFG A+ + N+S
Sbjct: 146 YMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG----EPNVS- 200
Query: 74 TFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVV 133
C Y Y +PE++ G DIWS G V+ ++ G+ F + + L ++ K +
Sbjct: 201 XICSRY-YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLG 259
Query: 134 FP 135
P
Sbjct: 260 TP 261
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 5/113 (4%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+++AD + Y + K VHRD+ N ++ + +K+ DFG R + T Y + +
Sbjct: 137 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETAYYRKGGKGLL 194
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSELLKQV 128
+ +PE LK +T SD+WS GVVL+ + P+ + ++LK V
Sbjct: 195 -PVRWMAPESLKDGVFT-TSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 245
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 8/95 (8%)
Query: 24 DYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQ-NLSETFCGSYAYA 82
D+C K ++HRD+K N+LLD+++ + DFG A+ DYK ++ G +
Sbjct: 149 DHCDPK-IIHRDVKAANILLDEEFEAVVGDFGLAKL-----MDYKDXHVXXAVRGXIGHI 202
Query: 83 SPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFD 117
+PE L + +++D++ GV+L ++ G+ FD
Sbjct: 203 APEYLS-TGKSSEKTDVFGYGVMLLELITGQRAFD 236
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q++ + Y + + VHRD+ N+LL ++ K+SDFG ++ + YK +
Sbjct: 135 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW-- 192
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLF-AMVYGRLPFDDTNYSELLKQVQK 130
+ +PE + ++ +SD+WS GV+++ A YG+ P+ SE+ ++K
Sbjct: 193 PVKWYAPECINYYKFS-SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 245
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q++ + Y + + VHRD+ N+LL ++ K+SDFG ++ + YK +
Sbjct: 135 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW-- 192
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLF-AMVYGRLPFDDTNYSELLKQVQK 130
+ +PE + ++ +SD+WS GV+++ A YG+ P+ SE+ ++K
Sbjct: 193 PVKWYAPECINYYKFS-SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 245
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q++ + Y + + VHRD+ N+LL ++ K+SDFG ++ + YK +
Sbjct: 119 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW-- 176
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLF-AMVYGRLPFDDTNYSELLKQVQK 130
+ +PE + ++ +SD+WS GV+++ A YG+ P+ SE+ ++K
Sbjct: 177 PVKWYAPECINYYKFS-SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 229
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q++ + Y + + VHRD+ N+LL ++ K+SDFG ++ + YK +
Sbjct: 115 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW-- 172
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLF-AMVYGRLPFDDTNYSELLKQVQK 130
+ +PE + ++ +SD+WS GV+++ A YG+ P+ SE+ ++K
Sbjct: 173 PVKWYAPECINYYKFS-SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 225
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q++ + Y + + VHRD+ N+LL ++ K+SDFG ++ + YK +
Sbjct: 113 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW-- 170
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLF-AMVYGRLPFDDTNYSELLKQVQK 130
+ +PE + ++ +SD+WS GV+++ A YG+ P+ SE+ ++K
Sbjct: 171 PVKWYAPECINYYKFS-SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 223
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 69/124 (55%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q++ A++Y KK+ +HRD+ N L+ + + +K++DFG +R + + + F
Sbjct: 116 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKF- 172
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE L ++ +SD+W+ GV+L+ + YG P+ + S++ + ++K R+
Sbjct: 173 -PIKWTAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRME 230
Query: 134 FPES 137
PE
Sbjct: 231 RPEG 234
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ V ++S VA+K + + ++ +FL +E V+K +KHPNL++ L
Sbjct: 22 GQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFL-KEAAVMKEIKHPNLVQLLGVCT 77
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
YII E+ G+LL+ +R+
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRE 100
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 69/124 (55%), Gaps = 8/124 (6%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+Q++ A++Y KK+ +HRD+ N L+ + + +K++DFG +R + + + F
Sbjct: 116 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKF- 172
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSELLKQVQK--RVV 133
+ +PE L ++ +SD+W+ GV+L+ + YG P+ + S++ + ++K R+
Sbjct: 173 -PIKWTAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRME 230
Query: 134 FPES 137
PE
Sbjct: 231 RPEG 234
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
Y V ++S VA+K + + ++ +FL +E V+K +KHPNL++ L
Sbjct: 22 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFL-KEAAVMKEIKHPNLVQLLGVCT 77
Query: 262 TTHRVYIIMEYAKNGSLLEVIRK 284
YII+E+ G+LL+ +R+
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRE 100
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 66/126 (52%), Gaps = 5/126 (3%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKY--NIKLSDFGFARKY--SVNNTDYKQNLSE 73
++ D ++Y H+ VH DIK NLLL K + L+D+G + +Y + N+ Y++N +
Sbjct: 159 RMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRK 218
Query: 74 TFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVV 133
G+ + S + KGV + ++SD+ +G + + G+LP++ + Q K +
Sbjct: 219 GHNGTIEFTSLDAHKGVALS-RRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNL 277
Query: 134 FPESPR 139
E P+
Sbjct: 278 LDELPQ 283
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + + Y H + +HRD+ N+LLD+ +K+ DFG A+ + Y+ + E
Sbjct: 142 QICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYR--VREDGDS 199
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV 110
+ +PE LK + SD+WS GV L+ ++
Sbjct: 200 PVFWYAPECLKEYKFY-YASDVWSFGVTLYELL 231
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 55/96 (57%), Gaps = 7/96 (7%)
Query: 16 FSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETF 75
F Q+ +DY H K +++RD+K N+ L D +K+ DFG S+ N D K+ S+
Sbjct: 128 FEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLV--TSLKN-DGKRXRSK-- 182
Query: 76 CGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVY 111
G+ Y SPE + Y ++ D++++G++L +++
Sbjct: 183 -GTLRYMSPEQISSQDY-GKEVDLYALGLILAELLH 216
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFAR---KYSVNN-- 64
D + + Q A+ H +V+HRD+K NLL++ ++K+ DFG AR + + +N
Sbjct: 112 DHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 65 -TDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSE 123
T + ++E + Y +PE++ + D+WS G +L + R F +Y
Sbjct: 172 PTGQQSGMTEXVATRW-YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH 230
Query: 124 LLKQVQKRVVFP---------ESPRLSSSCKALISNILSPVK 156
L + + P ESPR K+L +P++
Sbjct: 231 QLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLE 272
Score = 34.7 bits (78), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQ--- 258
+Y V AT + VAIK I P+ L+ REI+++K KH N+I
Sbjct: 22 GAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL--REIKILKHFKHENIITIFNIQR 79
Query: 259 --AIETTHRVYIIME 271
+ E + VYII E
Sbjct: 80 PDSFENFNEVYIIQE 94
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 71/130 (54%), Gaps = 17/130 (13%)
Query: 19 LADAIDYCHKK-SVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
+ A+++ H K SV+HRD+K N+L++ +K+ DFG + Y V+ D +++ G
Sbjct: 118 IVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS-GYLVD--DVAKDID---AG 171
Query: 78 SYAYASPEILKGVPYTPQ-----QSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRV 132
Y +PE + P Q +SDIWS+G+ + + R P+D ++ +Q+ K+V
Sbjct: 172 CKPYMAPERIN--PELNQKGYSVKSDIWSLGITMIELAILRFPYD--SWGTPFQQL-KQV 226
Query: 133 VFPESPRLSS 142
V SP+L +
Sbjct: 227 VEEPSPQLPA 236
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 67/131 (51%), Gaps = 18/131 (13%)
Query: 1 NDILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKY 60
D LL ++ D + +A++Y + VHRD+ N+L+ + K+SDFG ++
Sbjct: 288 GDCLLKFSLD--------VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 339
Query: 61 SVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDT 119
S K + + +PE L+ ++ +SD+WS G++L+ + +GR+P+
Sbjct: 340 SSTQDTGKLPVK--------WTAPEALREKKFS-TKSDVWSFGILLWEIYSFGRVPYPRI 390
Query: 120 NYSELLKQVQK 130
+++ +V+K
Sbjct: 391 PLKDVVPRVEK 401
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 241 EIEVVKGLKHPNLIRFLQAI-ETTHRVYIIMEYAKNGSLLEVIR-KERYIDEDKALLCYS 298
E V+ L+H NL++ L I E +YI+ EY GSL++ +R + R + LL +S
Sbjct: 236 EASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS 295
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 67/131 (51%), Gaps = 18/131 (13%)
Query: 1 NDILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKY 60
D LL ++ D + +A++Y + VHRD+ N+L+ + K+SDFG ++
Sbjct: 101 GDCLLKFSLD--------VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 152
Query: 61 SVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDT 119
S K + + +PE L+ ++ +SD+WS G++L+ + +GR+P+
Sbjct: 153 SSTQDTGKLPVK--------WTAPEALREKKFS-TKSDVWSFGILLWEIYSFGRVPYPRI 203
Query: 120 NYSELLKQVQK 130
+++ +V+K
Sbjct: 204 PLKDVVPRVEK 214
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 241 EIEVVKGLKHPNLIRFLQAI-ETTHRVYIIMEYAKNGSLLEVIR-KERYIDEDKALLCYS 298
E V+ L+H NL++ L I E +YI+ EY GSL++ +R + R + LL +S
Sbjct: 49 EASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS 108
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 67/131 (51%), Gaps = 18/131 (13%)
Query: 1 NDILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKY 60
D LL ++ D + +A++Y + VHRD+ N+L+ + K+SDFG ++
Sbjct: 116 GDCLLKFSLD--------VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 167
Query: 61 SVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDT 119
S K + + +PE L+ ++ +SD+WS G++L+ + +GR+P+
Sbjct: 168 SSTQDTGKLPVK--------WTAPEALREKKFS-TKSDVWSFGILLWEIYSFGRVPYPRI 218
Query: 120 NYSELLKQVQK 130
+++ +V+K
Sbjct: 219 PLKDVVPRVEK 229
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 241 EIEVVKGLKHPNLIRFLQAI-ETTHRVYIIMEYAKNGSLLEVIR-KERYIDEDKALLCYS 298
E V+ L+H NL++ L I E +YI+ EY GSL++ +R + R + LL +S
Sbjct: 64 EASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS 123
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 72/131 (54%), Gaps = 19/131 (14%)
Query: 19 LADAIDYCHKK-SVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETF-C 76
+ A+++ H K SV+HRD+K N+L++ +K+ DFG + Y V+ ++++T
Sbjct: 162 IVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS-GYLVD------SVAKTIDA 214
Query: 77 GSYAYASPEILKGVPYTPQ-----QSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKR 131
G Y +PE + P Q +SDIWS+G+ + + R P+D ++ +Q+ K+
Sbjct: 215 GCKPYMAPERIN--PELNQKGYSVKSDIWSLGITMIELAILRFPYD--SWGTPFQQL-KQ 269
Query: 132 VVFPESPRLSS 142
VV SP+L +
Sbjct: 270 VVEEPSPQLPA 280
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 19 LADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGS 78
+A + Y VHRD+ N+L++ K+SDFG AR D + T G
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLE----DDPEAAYTTRGGK 211
Query: 79 YA--YASPEILKGVPYTPQQSDIWSMGVVLF-AMVYGRLPFDDTNYSELLKQVQKRVVFP 135
+ SPE + +T SD+WS G+VL+ M YG P+ + + +++K V + P
Sbjct: 212 IPIRWTSPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP 270
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 208 KLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVY 267
+L ++ VAIK + KV + FL E ++ HPN+IR + + V
Sbjct: 65 RLKLPSKKEISVAIKTL-KVGYTEKQRRDFL-GEASIMGQFDHPNIIRLEGVVTKSKPVM 122
Query: 268 IIMEYAKNGSLLEVIRK 284
I+ EY +NGSL +RK
Sbjct: 123 IVTEYMENGSLDSFLRK 139
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
SQ+ ++Y + VHRD+ N+L++ + ++K++DFG A+ ++ Y + E
Sbjct: 121 SQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV--VREPGQ 178
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM 109
+ +PE L ++ +QSD+WS GVVL+ +
Sbjct: 179 SPIFWYAPESLSDNIFS-RQSDVWSFGVVLYEL 210
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 240 REIEVVKGLKHPNLIRFLQAIETTHR--VYIIMEYAKNGSLLEVIRKERY-IDEDKALLC 296
REI+++K L ++++ R + ++MEY +G L + +++ R +D + LL
Sbjct: 60 REIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLY 119
Query: 297 YSEVSNLSQTFS--RCCYQD 314
S++ + RC ++D
Sbjct: 120 SSQICKGMEYLGSRRCVHRD 139
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 54/96 (56%), Gaps = 9/96 (9%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDY---KQNLSE 73
SQ+ ++Y + VHRD+ N+L++ + ++K++DFG A+ ++ Y + S
Sbjct: 122 SQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP 181
Query: 74 TFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM 109
F + +PE L ++ +QSD+WS GVVL+ +
Sbjct: 182 IF-----WYAPESLSDNIFS-RQSDVWSFGVVLYEL 211
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 240 REIEVVKGLKHPNLIRFLQAIETTHR--VYIIMEYAKNGSLLEVIRKERY-IDEDKALLC 296
REI+++K L ++++ R + ++MEY +G L + +++ R +D + LL
Sbjct: 61 REIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLY 120
Query: 297 YSEVSNLSQTFS--RCCYQD 314
S++ + RC ++D
Sbjct: 121 SSQICKGMEYLGSRRCVHRD 140
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 54/96 (56%), Gaps = 9/96 (9%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDY---KQNLSE 73
SQ+ ++Y + VHRD+ N+L++ + ++K++DFG A+ ++ Y + S
Sbjct: 134 SQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP 193
Query: 74 TFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM 109
F + +PE L ++ +QSD+WS GVVL+ +
Sbjct: 194 IF-----WYAPESLSDNIFS-RQSDVWSFGVVLYEL 223
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 240 REIEVVKGLKHPNLIRFLQAIETTHR--VYIIMEYAKNGSLLEVIRKERY-IDEDKALLC 296
REI+++K L ++++ R + ++MEY +G L + +++ R +D + LL
Sbjct: 73 REIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLY 132
Query: 297 YSEVSNLSQTFS--RCCYQD 314
S++ + RC ++D
Sbjct: 133 SSQICKGMEYLGSRRCVHRD 152
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 19 LADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGS 78
+A + Y VHRD+ N+L++ K+SDFG +R D + T G
Sbjct: 156 IASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLE----DDPEAAYTTRGGK 211
Query: 79 YA--YASPEILKGVPYTPQQSDIWSMGVVLF-AMVYGRLPFDDTNYSELLKQVQKRVVFP 135
+ SPE + +T SD+WS G+VL+ M YG P+ + + +++K V + P
Sbjct: 212 IPIRWTSPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP 270
Score = 34.3 bits (77), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 208 KLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVY 267
+L ++ VAIK + KV + FL E ++ HPN+IR + + V
Sbjct: 65 RLKLPSKKEISVAIKTL-KVGYTEKQRRDFL-GEASIMGQFDHPNIIRLEGVVTKSKPVM 122
Query: 268 IIMEYAKNGSLLEVIRK 284
I+ E +NGSL +RK
Sbjct: 123 IVTEXMENGSLDSFLRK 139
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 25/160 (15%)
Query: 19 LADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGS 78
+ + Y S VHRD+ N+L++ K+SDFG +R D + T G
Sbjct: 140 IGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLE----DDPEAAYTTRGGK 195
Query: 79 YA--YASPEILKGVPYTPQQSDIWSMGVVLF-AMVYGRLPFDDTNYSELLKQVQKRVVFP 135
+ +PE + +T SD+WS G+V++ M YG P+ D + +++K +++ P
Sbjct: 196 IPIRWTAPEAIAYRKFT-SASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLP 254
Query: 136 ESPRLSSSCKALISNILSPVKFRIQMEDIRQDPWLKEDSN 175
P+ I + + D W KE S+
Sbjct: 255 -----------------PPMDCPIALHQLMLDCWQKERSD 277
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 241 EIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRK 284
E ++ HPN+I + V II EY +NGSL +RK
Sbjct: 80 EASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK 123
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 21/117 (17%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARK------YSVNNTDYKQNL 71
Q+A ++Y ++ VHRD+ N +LD+ + +K++DFG AR YSV + +
Sbjct: 132 QVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL- 190
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV------YGRL-PFDDTNY 121
+ + E L+ +T +SD+WS GV+L+ ++ Y + PFD T++
Sbjct: 191 ------PVKWTALESLQTYRFT-TKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHF 240
Score = 31.6 bits (70), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 220 AIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRV-YIIMEYAKNGSL 278
AIK +S++ + ++ FL RE +++GL HPN++ + + + ++++ Y +G L
Sbjct: 53 AIKSLSRITE-MQQVEAFL-REGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDL 110
Query: 279 LEVIR 283
L+ IR
Sbjct: 111 LQFIR 115
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 10/106 (9%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLL--LDDKYN-IKLSDFGFARKYSVNNT----DYKQN 70
Q+ + +++ H KS +HRDIK +N L L + N + + DFG A+KY +T Y++N
Sbjct: 111 QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYREN 170
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF 116
+ G+ YAS G+ + ++ D+ S+G VL + G LP+
Sbjct: 171 --KNLTGTARYASVNTHLGIEQS-RRDDLESLGYVLMYFLRGSLPW 213
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + + Y H + +HR + N+LLD+ +K+ DFG A+ + Y+ + E
Sbjct: 119 QICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR--VREDGDS 176
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTN------YSELLKQVQKR 131
+ +PE LK + SD+WS GV L+ + L + D+N ++EL+ Q +
Sbjct: 177 PVFWYAPECLKECKFY-YASDVWSFGVTLYEL----LTYCDSNQSPHTKFTELIGHTQGQ 231
Query: 132 VV 133
+
Sbjct: 232 MT 233
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + + Y H + +HR + N+LLD+ +K+ DFG A+ + Y+ + E
Sbjct: 120 QICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR--VREDGDS 177
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTN------YSELLKQVQKR 131
+ +PE LK + SD+WS GV L+ + L + D+N ++EL+ Q +
Sbjct: 178 PVFWYAPECLKECKFY-YASDVWSFGVTLYEL----LTYCDSNQSPHTKFTELIGHTQGQ 232
Query: 132 VV 133
+
Sbjct: 233 MT 234
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 19 LADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGS 78
+A + Y VHRD+ N+L++ K+SDFG +R D + T G
Sbjct: 156 IASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLE----DDPEAAYTTRGGK 211
Query: 79 YA--YASPEILKGVPYTPQQSDIWSMGVVLF-AMVYGRLPFDDTNYSELLKQVQKRVVFP 135
+ SPE + +T SD+WS G+VL+ M YG P+ + + +++K V + P
Sbjct: 212 IPIRWTSPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP 270
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 208 KLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVY 267
+L ++ VAIK + KV + FL E ++ HPN+IR + + V
Sbjct: 65 RLKLPSKKEISVAIKTL-KVGYTEKQRRDFL-GEASIMGQFDHPNIIRLEGVVTKSKPVM 122
Query: 268 IIMEYAKNGSLLEVIRK 284
I+ EY +NGSL +RK
Sbjct: 123 IVTEYMENGSLDSFLRK 139
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 19 LADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGS 78
+A + Y VHRD+ N+L++ K+SDFG +R D + T G
Sbjct: 127 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE----DDPEAAYTTRGGK 182
Query: 79 YA--YASPEILKGVPYTPQQSDIWSMGVVLF-AMVYGRLPFDDTNYSELLKQVQKRVVFP 135
+ SPE + +T SD+WS G+VL+ M YG P+ + + +++K V + P
Sbjct: 183 IPIRWTSPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP 241
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 208 KLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVY 267
+L ++ VAIK + KV + FL E ++ HPN+IR + + V
Sbjct: 36 RLKLPSKKEISVAIKTL-KVGYTEKQRRDFLG-EASIMGQFDHPNIIRLEGVVTKSKPVM 93
Query: 268 IIMEYAKNGSLLEVIRK 284
I+ EY +NGSL +RK
Sbjct: 94 IVTEYMENGSLDSFLRK 110
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 19 LADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGS 78
+A + Y VHRD+ N+L++ K+SDFG +R D + T G
Sbjct: 127 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE----DDPEAAYTTRGGK 182
Query: 79 YA--YASPEILKGVPYTPQQSDIWSMGVVLF-AMVYGRLPFDDTNYSELLKQVQKRVVFP 135
+ SPE + +T SD+WS G+VL+ M YG P+ + + +++K V + P
Sbjct: 183 IPIRWTSPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP 241
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 208 KLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVY 267
+L ++ VAIK + KV + FL E ++ HPN+IR + + V
Sbjct: 36 RLKLPSKKEISVAIKTL-KVGYTEKQRRDFLG-EASIMGQFDHPNIIRLEGVVTKSKPVM 93
Query: 268 IIMEYAKNGSLLEVIRK 284
I+ E +NGSL +RK
Sbjct: 94 IVTEXMENGSLDSFLRK 110
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 19 LADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGS 78
+A + Y VHRD+ N+L++ K+SDFG +R D + T G
Sbjct: 144 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE----DDPEAAYTTRGGK 199
Query: 79 YA--YASPEILKGVPYTPQQSDIWSMGVVLF-AMVYGRLPFDDTNYSELLKQVQKRVVFP 135
+ SPE + +T SD+WS G+VL+ M YG P+ + + +++K V + P
Sbjct: 200 IPIRWTSPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP 258
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 208 KLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVY 267
+L ++ VAIK + KV + FL E ++ HPN+IR + + V
Sbjct: 53 RLKLPSKKEISVAIKTL-KVGYTEKQRRDFLG-EASIMGQFDHPNIIRLEGVVTKSKPVM 110
Query: 268 IIMEYAKNGSLLEVIRK 284
I+ EY +NGSL +RK
Sbjct: 111 IVTEYMENGSLDSFLRK 127
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 25/160 (15%)
Query: 19 LADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGS 78
+ + Y S VHRD+ N+L++ K+SDFG +R D + T G
Sbjct: 119 IGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLE----DDPEAAYTTRGGK 174
Query: 79 YA--YASPEILKGVPYTPQQSDIWSMGVVLF-AMVYGRLPFDDTNYSELLKQVQKRVVFP 135
+ +PE + +T SD+WS G+V++ M YG P+ D + +++K +++ P
Sbjct: 175 IPIRWTAPEAIAYRKFT-SASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLP 233
Query: 136 ESPRLSSSCKALISNILSPVKFRIQMEDIRQDPWLKEDSN 175
P+ I + + D W KE S+
Sbjct: 234 -----------------PPMDCPIALHQLMLDCWQKERSD 256
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Query: 208 KLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVY 267
+L + VAIK + D ++ E ++ HPN+I + V
Sbjct: 28 RLKVPGKREICVAIKTLK--AGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVM 85
Query: 268 IIMEYAKNGSLLEVIRK 284
II EY +NGSL +RK
Sbjct: 86 IITEYMENGSLDAFLRK 102
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 6/120 (5%)
Query: 19 LADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTD--YKQNLSETFC 76
+A + Y + VHRD+ N+L++ K+SDFG +R + +D Y L
Sbjct: 144 IAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKI- 202
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLF-AMVYGRLPFDDTNYSELLKQVQKRVVFP 135
+ +PE ++ +T SD+WS G+V++ M YG P+ D +++ +++ P
Sbjct: 203 -PIRWTAPEAIQYRKFT-SASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLP 260
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 241 EIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRK 284
E ++ HPN+I + + V II E+ +NGSL +R+
Sbjct: 84 EASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ 127
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 25/160 (15%)
Query: 19 LADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGS 78
+ + Y S VHRD+ N+L++ K+SDFG +R D + T G
Sbjct: 125 IGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLE----DDPEAAYTTRGGK 180
Query: 79 YA--YASPEILKGVPYTPQQSDIWSMGVVLF-AMVYGRLPFDDTNYSELLKQVQKRVVFP 135
+ +PE + +T SD+WS G+V++ M YG P+ D + +++K +++ P
Sbjct: 181 IPIRWTAPEAIAYRKFT-SASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLP 239
Query: 136 ESPRLSSSCKALISNILSPVKFRIQMEDIRQDPWLKEDSN 175
P+ I + + D W KE S+
Sbjct: 240 -----------------PPMDCPIALHQLMLDCWQKERSD 262
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 241 EIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRK 284
E ++ HPN+I + V II EY +NGSL +RK
Sbjct: 65 EASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK 108
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 16/107 (14%)
Query: 18 QLADAIDYCHKK-SVVHRDIKCENLLL------DDKYNIKLSDFGFARKYSVNNTDYKQN 70
QL +DY H++ ++H DIK EN+L+ ++ IK++D G A Y + T+ Q
Sbjct: 139 QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQ- 197
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFD 117
+ Y SPE+L G P+ +DIWS ++F ++ G F+
Sbjct: 198 -------TREYRSPEVLLGAPWG-CGADIWSTACLIFELITGDFLFE 236
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 19 LADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGS 78
+A + Y VHRD+ N+L++ K+SDFG +R D + + T G
Sbjct: 154 IAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIE----DDPEAVYTTTGGK 209
Query: 79 YA--YASPEILKGVPYTPQQSDIWSMGVVLF-AMVYGRLPFDDTNYSELLKQVQKRVVFP 135
+ +PE ++ +T SD+WS G+V++ M YG P+ D + +++K +++ P
Sbjct: 210 IPVRWTAPEAIQYRKFT-SASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLP 268
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 208 KLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVY 267
+L + VAIK + KV + FL E ++ HPN++ + V
Sbjct: 63 RLKLPGKRDVAVAIKTL-KVGYTEKQRRDFLC-EASIMGQFDHPNVVHLEGVVTRGKPVM 120
Query: 268 IIMEYAKNGSLLEVIRK 284
I++E+ +NG+L +RK
Sbjct: 121 IVIEFMENGALDAFLRK 137
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 16/107 (14%)
Query: 18 QLADAIDYCHKK-SVVHRDIKCENLLL------DDKYNIKLSDFGFARKYSVNNTDYKQN 70
QL +DY H++ ++H DIK EN+L+ ++ IK++D G A Y + T+ Q
Sbjct: 139 QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQ- 197
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFD 117
+ Y SPE+L G P+ +DIWS ++F ++ G F+
Sbjct: 198 -------TREYRSPEVLLGAPWG-CGADIWSTACLIFELITGDFLFE 236
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 19 LADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGS 78
+A + Y VHRD+ N+L++ K+SDFG +R D + T G
Sbjct: 154 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE----DDPEAAYTTRGGK 209
Query: 79 YA--YASPEILKGVPYTPQQSDIWSMGVVLF-AMVYGRLPFDDTNYSELLKQVQKRVVFP 135
+ SPE + +T SD+WS G+VL+ M YG P+ + + +++K V + P
Sbjct: 210 IPIRWTSPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP 268
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 208 KLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVY 267
+L ++ VAIK + KV + FL E ++ HPN+IR + + V
Sbjct: 63 RLKLPSKKEISVAIKTL-KVGYTEKQRRDFL-GEASIMGQFDHPNIIRLEGVVTKSKPVM 120
Query: 268 IIMEYAKNGSLLEVIRK 284
I+ EY +NGSL +RK
Sbjct: 121 IVTEYMENGSLDSFLRK 137
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 8/120 (6%)
Query: 19 LADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGS 78
+A + Y VHRD+ N+L++ K+SDFG R D + T G
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLE----DDPEAAYTTRGGK 211
Query: 79 YA--YASPEILKGVPYTPQQSDIWSMGVVLF-AMVYGRLPFDDTNYSELLKQVQKRVVFP 135
+ SPE + +T SD+WS G+VL+ M YG P+ + + +++K V + P
Sbjct: 212 IPIRWTSPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP 270
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 208 KLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVY 267
+L ++ VAIK + KV + FL E ++ HPN+IR + + V
Sbjct: 65 RLKLPSKKEISVAIKTL-KVGYTEKQRRDFL-GEASIMGQFDHPNIIRLEGVVTKSKPVM 122
Query: 268 IIMEYAKNGSLLEVIRK 284
I+ EY +NGSL +RK
Sbjct: 123 IVTEYMENGSLDSFLRK 139
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 19 LADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGS 78
+A + Y VHRD+ N+L++ K+SDFG +R D + T G
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE----DDPEAAYTTRGGK 211
Query: 79 YA--YASPEILKGVPYTPQQSDIWSMGVVLF-AMVYGRLPFDDTNYSELLKQVQKRVVFP 135
+ SPE + +T SD+WS G+VL+ M YG P+ + + +++K V + P
Sbjct: 212 IPIRWTSPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP 270
Score = 34.3 bits (77), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 208 KLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVY 267
+L ++ VAIK + KV + FL E ++ HPN+IR + + V
Sbjct: 65 RLKLPSKKEISVAIKTL-KVGYTEKQRRDFL-GEASIMGQFDHPNIIRLEGVVTKSKPVM 122
Query: 268 IIMEYAKNGSLLEVIRK 284
I+ E +NGSL +RK
Sbjct: 123 IVTEXMENGSLDSFLRK 139
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 19 LADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGS 78
+A + Y VHRD+ N+L++ K+SDFG +R D + T G
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE----DDPEAAYTTRGGK 211
Query: 79 YA--YASPEILKGVPYTPQQSDIWSMGVVLF-AMVYGRLPFDDTNYSELLKQVQKRVVFP 135
+ SPE + +T SD+WS G+VL+ M YG P+ + + +++K V + P
Sbjct: 212 IPIRWTSPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP 270
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 208 KLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVY 267
+L ++ VAIK + KV + FL E ++ HPN+IR + + V
Sbjct: 65 RLKLPSKKEISVAIKTL-KVGYTEKQRRDFL-GEASIMGQFDHPNIIRLEGVVTKSKPVM 122
Query: 268 IIMEYAKNGSLLEVIRK 284
I+ EY +NGSL +RK
Sbjct: 123 IVTEYMENGSLDSFLRK 139
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 19 LADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGS 78
+A + Y VHRD+ N+L++ K+SDFG +R D + T G
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE----DDPEAAYTTRGGK 211
Query: 79 YA--YASPEILKGVPYTPQQSDIWSMGVVLF-AMVYGRLPFDDTNYSELLKQVQKRVVFP 135
+ SPE + +T SD+WS G+VL+ M YG P+ + + +++K V + P
Sbjct: 212 IPIRWTSPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP 270
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 208 KLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVY 267
+L ++ VAIK + KV + FL E ++ HPN+IR + + V
Sbjct: 65 RLKLPSKKEISVAIKTL-KVGYTEKQRRDFL-GEASIMGQFDHPNIIRLEGVVTKSKPVM 122
Query: 268 IIMEYAKNGSLLEVIRK 284
I+ EY +NGSL +RK
Sbjct: 123 IVTEYMENGSLDSFLRK 139
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 19 LADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGS 78
+A + Y VHRD+ N+L++ K+SDFG +R D + T G
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE----DDPEAAYTTRGGK 211
Query: 79 YA--YASPEILKGVPYTPQQSDIWSMGVVLF-AMVYGRLPFDDTNYSELLKQVQKRVVFP 135
+ SPE + +T SD+WS G+VL+ M YG P+ + + +++K V + P
Sbjct: 212 IPIRWTSPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP 270
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 208 KLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVY 267
+L ++ VAIK + KV + FL E ++ HPN+IR + + V
Sbjct: 65 RLKLPSKKEISVAIKTL-KVGYTEKQRRDFL-GEASIMGQFDHPNIIRLEGVVTKSKPVM 122
Query: 268 IIMEYAKNGSLLEVIRK 284
I+ EY +NGSL +RK
Sbjct: 123 IVTEYMENGSLDSFLRK 139
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 19 LADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGS 78
+A + Y + VHRD+ N+L++ K+SDFG +R D + T G
Sbjct: 156 IAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE----DDPEATYTTSGGK 211
Query: 79 YA--YASPEILKGVPYTPQQSDIWSMGVVLF-AMVYGRLPFDDTNYSELLKQVQKRVVFP 135
+ +PE + +T SD+WS G+V++ M YG P+ + + E++K + P
Sbjct: 212 IPIRWTAPEAISYRKFT-SASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLP 270
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Query: 204 YATVKLATSARHSQDVAIKIISKV---QAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAI 260
Y + +S + VAIK + + +D+L E ++ H N+IR I
Sbjct: 61 YKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLG-----EAGIMGQFSHHNIIRLEGVI 115
Query: 261 ETTHRVYIIMEYAKNGSLLEVIRKE 285
+ II EY +NG+L + +R++
Sbjct: 116 SKYKPMMIITEYMENGALDKFLREK 140
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 19 LADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGS 78
+A + Y VHRD+ N+L++ K+SDFG +R D + T G
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE----DDPEAAYTTRGGK 211
Query: 79 YA--YASPEILKGVPYTPQQSDIWSMGVVLF-AMVYGRLPFDDTNYSELLKQVQKRVVFP 135
+ SPE + +T SD+WS G+VL+ M YG P+ + + +++K V + P
Sbjct: 212 IPIRWTSPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP 270
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 208 KLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVY 267
+L ++ VAIK + KV + FL E ++ HPN+IR + + V
Sbjct: 65 RLKLPSKKEISVAIKTL-KVGYTEKQRRDFL-GEASIMGQFDHPNIIRLEGVVTKSKPVM 122
Query: 268 IIMEYAKNGSLLEVIRK 284
I+ EY +NGSL +RK
Sbjct: 123 IVTEYMENGSLDSFLRK 139
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
SQ+ ++Y + VHRD+ N+L++ + ++K++DFG A+ ++ + E
Sbjct: 118 SQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKD--XXVVREPGQ 175
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM 109
+ +PE L ++ +QSD+WS GVVL+ +
Sbjct: 176 SPIFWYAPESLSDNIFS-RQSDVWSFGVVLYEL 207
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 240 REIEVVKGLKHPNLIRFLQAIETTHR--VYIIMEYAKNGSLLEVIRKERY-IDEDKALLC 296
REI+++K L ++++ R + ++MEY +G L + +++ R +D + LL
Sbjct: 57 REIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLY 116
Query: 297 YSEVSNLSQTFS--RCCYQD 314
S++ + RC ++D
Sbjct: 117 SSQICKGMEYLGSRRCVHRD 136
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLL-DDKYNIKLSDFGFARKYSVNNTDYK 68
D+A + Q + ++Y H + ++H D+K +N+LL D L DFG A +
Sbjct: 166 DRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS 225
Query: 69 QNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF 116
+ G+ + +PE++ G P + DIWS ++ M+ G P+
Sbjct: 226 LLTGDYIPGTETHMAPEVVMGKP-CDAKVDIWSSCCMMLHMLNGCHPW 272
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 234 LKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
L+ F E+ GL P ++ A+ V I ME + GSL ++I++ + ED+A
Sbjct: 109 LEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRA 168
Query: 294 L 294
L
Sbjct: 169 L 169
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 15/124 (12%)
Query: 22 AIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGSYAY 81
+ Y H +++HRD+K N+LL + +KL DFG A + N F G+ +
Sbjct: 127 GLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN---------XFVGTPYW 177
Query: 82 ASPEILKGVPYTP--QQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPESPR 139
+PE++ + + D+WS+G+ + + P + N L + + ESP
Sbjct: 178 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----ESPA 233
Query: 140 LSSS 143
L S
Sbjct: 234 LQSG 237
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V A R+S+ VAIK +S + + + +E+ ++ L+HPN I++
Sbjct: 26 GSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL 85
Query: 262 TTHRVYIIMEY--AKNGSLLEVIRK 284
H +++MEY LLEV +K
Sbjct: 86 REHTAWLVMEYCLGSASDLLEVHKK 110
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 15/124 (12%)
Query: 22 AIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGSYAY 81
+ Y H +++HRD+K N+LL + +KL DFG A + N F G+ +
Sbjct: 166 GLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN---------XFVGTPYW 216
Query: 82 ASPEILKGVPYTP--QQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRVVFPESPR 139
+PE++ + + D+WS+G+ + + P + N L + + ESP
Sbjct: 217 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----ESPA 272
Query: 140 LSSS 143
L S
Sbjct: 273 LQSG 276
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
S+ V A R+S+ VAIK +S + + + +E+ ++ L+HPN I++
Sbjct: 65 GSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL 124
Query: 262 TTHRVYIIMEY--AKNGSLLEVIRK 284
H +++MEY LLEV +K
Sbjct: 125 REHTAWLVMEYCLGSASDLLEVHKK 149
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLL-DDKYNIKLSDFGFARKYSVNNTDYK 68
D+A + Q + ++Y H + ++H D+K +N+LL D L DFG A +
Sbjct: 150 DRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS 209
Query: 69 QNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF 116
+ G+ + +PE++ G P + DIWS ++ M+ G P+
Sbjct: 210 LLTGDYIPGTETHMAPEVVMGKP-CDAKVDIWSSCCMMLHMLNGCHPW 256
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 234 LKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
L+ F E+ GL P ++ A+ V I ME + GSL ++I++ + ED+A
Sbjct: 93 LEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRA 152
Query: 294 L 294
L
Sbjct: 153 L 153
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + + Y H + +HR++ N+LLD+ +K+ DFG A+ + Y+ + E
Sbjct: 125 QICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR--VREDGDS 182
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV 110
+ +PE LK + SD+WS GV L+ ++
Sbjct: 183 PVFWYAPECLKEYKFY-YASDVWSFGVTLYELL 214
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
SQ+A + Y VHRD+ N L+ +K+ DFG +R + +TDY + T
Sbjct: 142 SQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR--DIYSTDYYRVGGRTML 199
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSE 123
+ PE + +T +SD+WS GVVL+ + YG+ P+ + +E
Sbjct: 200 -PIRWMPPESILYRKFT-TESDVWSFGVVLWEIFTYGKQPWYQLSNTE 245
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/83 (21%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Query: 217 QDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNG 276
QD + + ++ + ++ RE E++ L+H +++RF + ++ EY ++G
Sbjct: 46 QDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG 105
Query: 277 SLLEVIRKERYIDEDKALLCYSE 299
L +R D LL E
Sbjct: 106 DLNRFLRSH---GPDAKLLAGGE 125
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
SQ+A + Y VHRD+ N L+ +K+ DFG +R + +TDY + T
Sbjct: 136 SQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR--DIYSTDYYRVGGRTML 193
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSE 123
+ PE + +T +SD+WS GVVL+ + YG+ P+ + +E
Sbjct: 194 -PIRWMPPESILYRKFT-TESDVWSFGVVLWEIFTYGKQPWYQLSNTE 239
Score = 31.2 bits (69), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 18/83 (21%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Query: 217 QDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNG 276
QD + + ++ + ++ RE E++ L+H +++RF + ++ EY ++G
Sbjct: 40 QDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG 99
Query: 277 SLLEVIRKERYIDEDKALLCYSE 299
L +R D LL E
Sbjct: 100 DLNRFLRSH---GPDAKLLAGGE 119
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Query: 10 DKARRWFSQLADAIDYCHKKSVVHRDIKCENLLL-DDKYNIKLSDFGFARKYSVNNTDYK 68
D+A + Q + ++Y H + ++H D+K +N+LL D L DFG A +
Sbjct: 164 DRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS 223
Query: 69 QNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF 116
+ G+ + +PE++ G P + DIWS ++ M+ G P+
Sbjct: 224 LLTGDYIPGTETHMAPEVVMGKP-CDAKVDIWSSCCMMLHMLNGCHPW 270
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 234 LKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYIDEDKA 293
L+ F E+ GL P ++ A+ V I ME + GSL ++I++ + ED+A
Sbjct: 107 LEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRA 166
Query: 294 L 294
L
Sbjct: 167 L 167
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 8/98 (8%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLL----DDKYNIKLSDFGFARKYSVNNTDYKQNLS- 72
Q+ D I Y H V+HRD+K N+L+ ++ +K++D GFAR + N+ K
Sbjct: 136 QILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF---NSPLKPLADL 192
Query: 73 ETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV 110
+ ++ Y +PE+L G + + DIW++G + ++
Sbjct: 193 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 230
Score = 31.2 bits (69), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 33/50 (66%), Gaps = 5/50 (10%)
Query: 240 REIEVVKGLKHPNLIRFLQAIETTH---RVYIIMEYAKNGSLLEVIRKER 286
REI +++ LKHPN+I LQ + +H +V+++ +YA++ L +I+ R
Sbjct: 67 REIALLRELKHPNVIS-LQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHR 114
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 9/124 (7%)
Query: 15 WFSQLADAIDYCHKKSV--VHRDIKCENLLLDDK-YNIKLSDFGFARKYSVNNTDYKQNL 71
+ QL +I H SV HRDIK N+L+++ +KL DFG A+K S + +
Sbjct: 134 FLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVA--- 190
Query: 72 SETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKR 131
C Y Y +PE++ G + DIWS+G + M+ G F N + L ++ +
Sbjct: 191 --YICSRY-YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRV 247
Query: 132 VVFP 135
+ P
Sbjct: 248 LGCP 251
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 12/143 (8%)
Query: 1 NDILLDYNTDKAR-------RWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSD 53
D L T+ AR + A ++Y K +HRD+ N L+ +K +K+SD
Sbjct: 197 GDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISD 256
Query: 54 FGFARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLF-AMVYG 112
FG +R+ + L + + +PE L Y+ +SD+WS G++L+ G
Sbjct: 257 FGMSREEADGVXAASGGLRQV---PVKWTAPEALNYGRYS-SESDVWSFGILLWETFSLG 312
Query: 113 RLPFDDTNYSELLKQVQKRVVFP 135
P+ + + + + V+K P
Sbjct: 313 ASPYPNLSNQQTREFVEKGGRLP 335
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 3/95 (3%)
Query: 230 PIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYID 289
P D KFL +E ++K HPN++R + +YI+ME + G L +R E
Sbjct: 152 PPDLKAKFL-QEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARL 210
Query: 290 EDKALL--CYSEVSNLSQTFSRCCYQDHIQDLSCF 322
K LL + + S+CC + +C
Sbjct: 211 RVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCL 245
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+ + + Y H + +HR++ N+LLD+ +K+ DFG A+ + Y+ + E
Sbjct: 125 QICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR--VREDGDS 182
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV 110
+ +PE LK + SD+WS GV L+ ++
Sbjct: 183 PVFWYAPECLKEYKFY-YASDVWSFGVTLYELL 214
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
SQ+A + + K+ +HRD+ N+LL + + K+ DFG AR +N+++Y +
Sbjct: 165 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI-MNDSNYIVKGNARL- 222
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLF 107
+ +PE + YT QSD+WS G++L+
Sbjct: 223 -PVKWMAPESIFDCVYT-VQSDVWSYGILLW 251
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 219 VAIKIISKVQAPIDYLKKFLPREIEVVKGL-KHPNLIRFLQAIETTHRVYIIMEYAKNGS 277
VA+K++ K A D K+ L E++++ L +H N++ L A V +I EY G
Sbjct: 64 VAVKML-KSTAHADE-KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 121
Query: 278 LLEVIRKE 285
LL +R++
Sbjct: 122 LLNFLRRK 129
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
SQ+A + Y VHRD+ N L+ +K+ DFG +R + +TDY + T
Sbjct: 165 SQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR--DIYSTDYYRVGGRTML 222
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM-VYGRLPFDDTNYSE 123
+ PE + +T +SD+WS GVVL+ + YG+ P+ + +E
Sbjct: 223 -PIRWMPPESILYRKFT-TESDVWSFGVVLWEIFTYGKQPWYQLSNTE 268
Score = 31.2 bits (69), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/83 (21%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Query: 217 QDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNG 276
QD + + ++ + ++ RE E++ L+H +++RF + ++ EY ++G
Sbjct: 69 QDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG 128
Query: 277 SLLEVIRKERYIDEDKALLCYSE 299
L +R D LL E
Sbjct: 129 DLNRFLRSH---GPDAKLLAGGE 148
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 60/113 (53%), Gaps = 6/113 (5%)
Query: 19 LADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGS 78
+ + + + +HRD+ N L+D +K+SDFG R V + Y ++ F
Sbjct: 113 VCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTR--YVLDDQYVSSVGTKF--P 168
Query: 79 YAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSELLKQVQK 130
+++PE+ Y+ +SD+W+ G++++ + G++P+D SE++ +V +
Sbjct: 169 VKWSAPEVFHYFKYS-SKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQ 220
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 7/105 (6%)
Query: 202 SSYATVKLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIE 261
+ VKL + DVA+K+I + D +F +E + + L HP L++F
Sbjct: 19 GQFGVVKLG-KWKGQYDVAVKMIKEGSMSED---EFF-QEAQTMMKLSHPKLVKFYGVCS 73
Query: 262 TTHRVYIIMEYAKNGSLLEVIRKERYIDEDKALL--CYSEVSNLS 304
+ +YI+ EY NG LL +R E LL CY ++
Sbjct: 74 KEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMA 118
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
SQ+A + + K+ +HRD+ N+LL + + K+ DFG AR +N+++Y +
Sbjct: 171 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI-MNDSNYIVKGNARL- 228
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLF 107
+ +PE + YT QSD+WS G++L+
Sbjct: 229 -PVKWMAPESIFDCVYT-VQSDVWSYGILLW 257
Score = 31.6 bits (70), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 219 VAIKIISKVQAPIDYLKKFLPREIEVVKGL-KHPNLIRFLQAIETTHRVYIIMEYAKNGS 277
VA+K++ K A D K+ L E++++ L +H N++ L A V +I EY G
Sbjct: 79 VAVKML-KSTAHADE-KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 278 LLEVI-RKERYIDEDKAL 294
LL + RK R ++ D A
Sbjct: 137 LLNFLRRKSRVLETDPAF 154
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+A +++ + +HRD+ N+LL +K +K+ DFG AR + DY +
Sbjct: 152 QVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDI-YKDPDYVRKGDARL-- 208
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLF 107
+ +PE + YT QSD+WS GV+L+
Sbjct: 209 PLKWMAPETIFDRVYT-IQSDVWSFGVLLW 237
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
SQ+A + + K+ +HRD+ N+LL + + K+ DFG AR +N+++Y +
Sbjct: 159 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI-MNDSNYIVKGNARL- 216
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLF 107
+ +PE + YT QSD+WS G++L+
Sbjct: 217 -PVKWMAPESIFDCVYT-VQSDVWSYGILLW 245
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 219 VAIKIISKVQAPIDYLKKFLPREIEVVKGL-KHPNLIRFLQAIETTHRVYIIMEYAKNGS 277
VA+K++ K A D K+ L E++++ L +H N++ L A V +I EY G
Sbjct: 71 VAVKML-KSTAHADE-KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 128
Query: 278 LLEVIRKERYIDEDK 292
LL +R++ D DK
Sbjct: 129 LLNFLRRKAEADLDK 143
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
SQ+A + + K+ +HRD+ N+LL + + K+ DFG AR +N+++Y +
Sbjct: 171 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI-MNDSNYIVKGNARL- 228
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLF 107
+ +PE + YT QSD+WS G++L+
Sbjct: 229 -PVKWMAPESIFDCVYT-VQSDVWSYGILLW 257
Score = 31.6 bits (70), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 219 VAIKIISKVQAPIDYLKKFLPREIEVVKGL-KHPNLIRFLQAIETTHRVYIIMEYAKNGS 277
VA+K++ K A D K+ L E++++ L +H N++ L A V +I EY G
Sbjct: 79 VAVKML-KSTAHADE-KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 278 LLEVI-RKERYIDEDKAL 294
LL + RK R ++ D A
Sbjct: 137 LLNFLRRKSRVLETDPAF 154
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+A +++ + +HRD+ N+LL +K +K+ DFG AR + DY +
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDARL-- 203
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSE 123
+ +PE + YT QSD+WS GV+L+ + G P+ E
Sbjct: 204 PLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDE 249
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+A +++ + +HRD+ N+LL +K +K+ DFG AR + DY +
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDARL-- 203
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSE 123
+ +PE + YT QSD+WS GV+L+ + G P+ E
Sbjct: 204 PLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDE 249
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+A +++ + +HRD+ N+LL +K +K+ DFG AR + ++ +
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL--- 203
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSE 123
+ +PE + YT QSD+WS GV+L+ + G P+ E
Sbjct: 204 PLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDE 249
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+A +++ + +HRD+ N+LL +K +K+ DFG AR + DY +
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDARL-- 212
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSE 123
+ +PE + YT QSD+WS GV+L+ + G P+ E
Sbjct: 213 PLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDE 258
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+A +++ + +HRD+ N+LL +K +K+ DFG AR + ++ +
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL--- 212
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSE 123
+ +PE + YT QSD+WS GV+L+ + G P+ E
Sbjct: 213 PLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDE 258
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+A +++ + +HRD+ N+LL +K +K+ DFG AR + DY +
Sbjct: 193 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDARL-- 249
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSE 123
+ +PE + YT QSD+WS GV+L+ + G P+ E
Sbjct: 250 PLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDE 295
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+A +++ + +HRD+ N+LL +K +K+ DFG AR + DY +
Sbjct: 201 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDARL-- 257
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAM 109
+ +PE + YT QSD+WS GV+L+ +
Sbjct: 258 PLKWMAPETIFDRVYT-IQSDVWSFGVLLWEI 288
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+A +++ + +HRD+ N+LL +K +K+ DFG AR + ++ +
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL--- 203
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSE 123
+ +PE + YT QSD+WS GV+L+ + G P+ E
Sbjct: 204 PLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDE 249
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 69/130 (53%), Gaps = 17/130 (13%)
Query: 19 LADAIDYCHKK-SVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
+ A+++ H K SV+HRD+K N+L++ +K DFG + Y V+ D +++ G
Sbjct: 145 IVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGIS-GYLVD--DVAKDID---AG 198
Query: 78 SYAYASPEILKGVPYTPQ-----QSDIWSMGVVLFAMVYGRLPFDDTNYSELLKQVQKRV 132
Y +PE + P Q +SDIWS+G+ + R P+D ++ +Q+ K+V
Sbjct: 199 CKPYXAPERIN--PELNQKGYSVKSDIWSLGITXIELAILRFPYD--SWGTPFQQL-KQV 253
Query: 133 VFPESPRLSS 142
V SP+L +
Sbjct: 254 VEEPSPQLPA 263
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 14 RWFSQLADAIDYC----HKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQ 69
R S L + + +C HK S+ HRD K +N+LL L+DFG A ++
Sbjct: 123 RGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGD- 181
Query: 70 NLSETFCGSYAYASPEILKGVPYTPQQS----DIWSMGVVLFAMV 110
+ G+ Y +PE+L+G + + D+++MG+VL+ +V
Sbjct: 182 --THGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELV 224
Score = 31.2 bits (69), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 12/74 (16%)
Query: 240 REIEVVKGLKHPNLIRFLQAIETTH----RVYIIMEYAKNGSLLEVIRKERYIDEDKALL 295
REI G+KH NL++F+ A + +++I + GSL + ++ ++
Sbjct: 58 REIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGN--------II 109
Query: 296 CYSEVSNLSQTFSR 309
++E+ ++++T SR
Sbjct: 110 TWNELCHVAETMSR 123
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
SQ+A + + K+ +HRD+ N+LL + + K+ DFG AR +N+++Y +
Sbjct: 167 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI-MNDSNYIVKGNARL- 224
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLF 107
+ +PE + YT QSD+WS G++L+
Sbjct: 225 -PVKWMAPESIFDCVYT-VQSDVWSYGILLW 253
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 219 VAIKIISKVQAPIDYLKKFLPREIEVVKGL-KHPNLIRFLQAIETTHRVYIIMEYAKNGS 277
VA+K++ K A D K+ L E++++ L +H N++ L A V +I EY G
Sbjct: 79 VAVKML-KSTAHADE-KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 278 LLEVIRKERYIDEDK 292
LL +R++ D DK
Sbjct: 137 LLNFLRRKAEADLDK 151
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+A +++ + +HRD+ N+LL +K +K+ DFG AR + DY +
Sbjct: 206 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDARL-- 262
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAM 109
+ +PE + YT QSD+WS GV+L+ +
Sbjct: 263 PLKWMAPETIFDRVYT-IQSDVWSFGVLLWEI 293
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+A +++ + +HRD+ N+LL +K +K+ DFG AR + DY +
Sbjct: 199 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDARL-- 255
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAM 109
+ +PE + YT QSD+WS GV+L+ +
Sbjct: 256 PLKWMAPETIFDRVYT-IQSDVWSFGVLLWEI 286
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+A +++ + +HRD+ N+LL +K +K+ DFG AR + DY +
Sbjct: 158 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDARL-- 214
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLF 107
+ +PE + YT QSD+WS GV+L+
Sbjct: 215 PLKWMAPETIFDRVYT-IQSDVWSFGVLLW 243
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+A +++ + +HRD+ N+LL +K +K+ DFG AR + DY +
Sbjct: 208 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDARL-- 264
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAM 109
+ +PE + YT QSD+WS GV+L+ +
Sbjct: 265 PLKWMAPETIFDRVYT-IQSDVWSFGVLLWEI 295
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
SQ+A + + K+ +HRD+ N+LL + + K+ DFG AR +N+++Y +
Sbjct: 173 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI-MNDSNYIVKGNARL- 230
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLF 107
+ +PE + YT QSD+WS G++L+
Sbjct: 231 -PVKWMAPESIFDCVYT-VQSDVWSYGILLW 259
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 219 VAIKIISKVQAPIDYLKKFLPREIEVVKGL-KHPNLIRFLQAIETTHRVYIIMEYAKNGS 277
VA+K++ K A D K+ L E++++ L +H N++ L A V +I EY G
Sbjct: 79 VAVKML-KSTAHADE-KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 278 LLEVIRKER 286
LL +R++R
Sbjct: 137 LLNFLRRKR 145
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+A +++ + +HRD+ N+LL +K +K+ DFG AR + ++ +
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL--- 212
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSE 123
+ +PE + YT QSD+WS GV+L+ + G P+ E
Sbjct: 213 PLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDE 258
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+A +++ + +HRD+ N+LL +K +K+ DFG AR + ++ +
Sbjct: 156 QVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL--- 212
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAM 109
+ +PE + YT QSD+WS GV+L+ +
Sbjct: 213 PLKWMAPETIFDRVYT-IQSDVWSFGVLLWEI 243
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+A +++ + +HRD+ N+LL +K +K+ DFG AR + DY +
Sbjct: 152 QVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDARL-- 208
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAM 109
+ +PE + YT QSD+WS GV+L+ +
Sbjct: 209 PLKWMAPETIFDRVYT-IQSDVWSFGVLLWEI 239
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 13/162 (8%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
W Q+A + Y + +VHR++ N+LL ++++DFG A + D KQ L
Sbjct: 120 WGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVA---DLLPPDDKQLLYSE 176
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQKRVV 133
+ + E + YT QSD+WS GV ++ M +G P+ +E+ ++K
Sbjct: 177 AKTPIKWMALESIHFGKYT-HQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEK--- 232
Query: 134 FPESPRLSSSCKALISNILSPVKFRIQMEDIRQDPWLKEDSN 175
RL+ I + VK + E+IR P KE +N
Sbjct: 233 ---GERLAQPQICTIDVYMVMVKCWMIDENIR--PTFKELAN 269
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 12/143 (8%)
Query: 1 NDILLDYNTDKAR-------RWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSD 53
D L T+ AR + A ++Y K +HRD+ N L+ +K +K+SD
Sbjct: 197 GDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISD 256
Query: 54 FGFARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLF-AMVYG 112
FG +R+ + L + + +PE L Y+ +SD+WS G++L+ G
Sbjct: 257 FGMSREEADGVYAASGGLRQV---PVKWTAPEALNYGRYS-SESDVWSFGILLWETFSLG 312
Query: 113 RLPFDDTNYSELLKQVQKRVVFP 135
P+ + + + + V+K P
Sbjct: 313 ASPYPNLSNQQTREFVEKGGRLP 335
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 3/95 (3%)
Query: 230 PIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRKERYID 289
P D KFL +E ++K HPN++R + +YI+ME + G L +R E
Sbjct: 152 PPDLKAKFL-QEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARL 210
Query: 290 EDKALL--CYSEVSNLSQTFSRCCYQDHIQDLSCF 322
K LL + + S+CC + +C
Sbjct: 211 RVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCL 245
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Query: 15 WFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSET 74
W Q+A + Y + +VHR++ N+LL ++++DFG A + D KQ L
Sbjct: 138 WGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVA---DLLPPDDKQLLYSE 194
Query: 75 FCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFA-MVYGRLPFDDTNYSELLKQVQK 130
+ + E + YT QSD+WS GV ++ M +G P+ +E+ ++K
Sbjct: 195 AKTPIKWMALESIHFGKYT-HQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEK 250
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 15/154 (9%)
Query: 22 AIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGSYAY 81
A+ + H + +VH D+K N+ L + KL DFG + Q G Y
Sbjct: 169 ALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE------GDPRY 222
Query: 82 ASPEILKGVPYTPQQSDIWSMGVVLFAMVYG-RLPFDDTNYSELLKQVQKRVVFPE-SPR 139
+PE+L+G T +D++S+G+ + + LP + +Q+++ + PE +
Sbjct: 223 MAPELLQGSYGT--AADVFSLGLTILEVACNMELPHGGEGW----QQLRQGYLPPEFTAG 276
Query: 140 LSSSCKALISNILSP-VKFRIQMEDIRQDPWLKE 172
LSS ++++ +L P K R E + P L++
Sbjct: 277 LSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ 310
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q++ + Y + S+VHRD+ N+L+ + +K+SDFG +R ++ K++
Sbjct: 158 QISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRI--- 214
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV 110
+ + E L YT QSD+WS GV+L+ +V
Sbjct: 215 PVKWMAIESLFDHIYT-TQSDVWSFGVLLWEIV 246
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 219 VAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSL 278
VA+K++ + +P + L+ L E V+K + HP++I+ A + +I+EYAK GSL
Sbjct: 56 VAVKMLKENASPSE-LRDLL-SEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 279 LEVIRKERYI 288
+R+ R +
Sbjct: 114 RGFLRESRKV 123
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 81/178 (45%), Gaps = 13/178 (7%)
Query: 1 NDILLDYNTDKARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYN--IKLSDFGFAR 58
N + N + + Q+ +A+ + H ++ H DI+ EN++ + + IK+ +FG AR
Sbjct: 93 NTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQAR 152
Query: 59 KYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF-D 117
+ + N F YA PE+ + +D+WS+G +++ ++ G PF
Sbjct: 153 QLKPGD-----NFRLLFTAPEYYA-PEVHQH-DVVSTATDMWSLGTLVYVLLSGINPFLA 205
Query: 118 DTNYSELLKQVQKRVVFPESPRLSSSCKAL--ISNIL-SPVKFRIQMEDIRQDPWLKE 172
+TN + + F E S +A+ + +L K R+ + Q PWLK+
Sbjct: 206 ETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQ 263
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 10/106 (9%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLL--LDDKYN-IKLSDFGFARKYSVNNTD----YKQN 70
Q+ I+Y H K+ +HRD+K +N L L K N + + DFG A+KY T Y++N
Sbjct: 111 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYREN 170
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF 116
+ G+ YAS G+ + ++ D+ S+G VL G LP+
Sbjct: 171 --KNLTGTARYASINTHLGIEQS-RRDDLESLGYVLMYFNLGSLPW 213
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 10/106 (9%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLL--LDDKYN-IKLSDFGFARKYSVNNTD----YKQN 70
Q+ I+Y H K+ +HRD+K +N L L K N + + DFG A+KY T Y++N
Sbjct: 113 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYREN 172
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF 116
+ G+ YAS G+ + ++ D+ S+G VL G LP+
Sbjct: 173 --KNLTGTARYASINTHLGIEQS-RRDDLESLGYVLMYFNLGSLPW 215
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q+A +++ + +HRD+ N+LL +K +K+ DFG AR + ++ +
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARL--- 212
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSE 123
+ +PE + YT QSD+WS GV+L+ + G P+ E
Sbjct: 213 PLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDE 258
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 10/106 (9%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLL--LDDKYN-IKLSDFGFARKYSVNNTD----YKQN 70
Q+ I+Y H K+ +HRD+K +N L L K N + + DFG A+KY T Y++N
Sbjct: 113 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYREN 172
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPF 116
+ G+ YAS G+ + ++ D+ S+G VL G LP+
Sbjct: 173 --KNLTGTARYASINTHLGIEQS-RRDDLESLGYVLMYFNLGSLPW 215
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 15/110 (13%)
Query: 19 LADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKY-----------SVNNTDY 67
+A + Y H +++HRD+ N L+ + N+ ++DFG AR S+ D
Sbjct: 117 IASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDR 176
Query: 68 KQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYGRLPFD 117
K+ T G+ + +PE++ G Y ++ D++S G+VL ++ GR+ D
Sbjct: 177 KKRY--TVVGNPYWMAPEMINGRSYD-EKVDVFSFGIVLCEII-GRVNAD 222
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 235 KKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIR 283
+ FL +E++V++ L+HPN+++F+ + R+ I EY K G+L +I+
Sbjct: 52 RTFL-KEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIK 99
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+ +A +DY +K +HRD+ N+L+ + Y K++DFG +R V K+ +
Sbjct: 139 ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY---VKKTMGRL-- 193
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSELLKQV 128
+ + E L YT SD+WS GV+L+ +V G P+ +EL +++
Sbjct: 194 -PVRWMAIESLNYSVYT-TNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 244
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Query: 218 DVAIKIISKVQAPIDYLKKFLPREIEVVKGLKH-PNLIRFLQAIETTHRVYIIMEYAKNG 276
D AIK + + + D+ + E+EV+ L H PN+I L A E +Y+ +EYA +G
Sbjct: 44 DAAIKRMKEYASKDDH--RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG 101
Query: 277 SLLEVIRKERYIDEDKAL-LCYSEVSNLS 304
+LL+ +RK R ++ D A + S S LS
Sbjct: 102 NLLDFLRKSRVLETDPAFAIANSTASTLS 130
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 17 SQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFC 76
+ +A +DY +K +HRD+ N+L+ + Y K++DFG +R V K+ +
Sbjct: 149 ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY---VKKTMGRL-- 203
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSELLKQV 128
+ + E L YT SD+WS GV+L+ +V G P+ +EL +++
Sbjct: 204 -PVRWMAIESLNYSVYT-TNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 254
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Query: 218 DVAIKIISKVQAPIDYLKKFLPREIEVVKGLKH-PNLIRFLQAIETTHRVYIIMEYAKNG 276
D AIK + + + D+ + E+EV+ L H PN+I L A E +Y+ +EYA +G
Sbjct: 54 DAAIKRMKEYASKDDH--RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG 111
Query: 277 SLLEVIRKERYIDEDKAL-LCYSEVSNLS 304
+LL+ +RK R ++ D A + S S LS
Sbjct: 112 NLLDFLRKSRVLETDPAFAIANSTASTLS 140
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 17/117 (14%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLD-------------DKYNIKLSDFGFARKYSVNN 64
Q+A + + H ++HRD+K +N+L+ + I +SDFG +K
Sbjct: 141 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 200
Query: 65 TDYKQNLSETFCGSYAYASPEILKGVP--YTPQQSDIWSMGVVLFAMVY-GRLPFDD 118
++ NL+ G+ + +PE+L+ + DI+SMG V + ++ G+ PF D
Sbjct: 201 XXFRXNLNNP-SGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 256
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 6/120 (5%)
Query: 19 LADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTD--YKQNLSETFC 76
+A + Y + VHR + N+L++ K+SDFG +R + +D Y L
Sbjct: 118 IAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKI- 176
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLF-AMVYGRLPFDDTNYSELLKQVQKRVVFP 135
+ +PE ++ +T SD+WS G+V++ M YG P+ D +++ +++ P
Sbjct: 177 -PIRWTAPEAIQYRKFT-SASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLP 234
Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 241 EIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSLLEVIRK 284
E ++ HPN+I + + V II E+ +NGSL +R+
Sbjct: 58 EASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ 101
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 7/114 (6%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARK-YSVNNTDYKQNLSETFC 76
Q+A + Y ++ VHRD+ N L+ + +K++DFG +R YS + YK + ++
Sbjct: 182 QVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADY--YKADGNDAI- 238
Query: 77 GSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSELLKQVQ 129
+ PE + YT +SD+W+ GVVL+ + YG P+ + E++ V+
Sbjct: 239 -PIRWMPPESIFYNRYT-TESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVR 290
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 17/117 (14%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLD-------------DKYNIKLSDFGFARKYSVNN 64
Q+A + + H ++HRD+K +N+L+ + I +SDFG +K
Sbjct: 141 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 200
Query: 65 TDYKQNLSETFCGSYAYASPEILKGVP--YTPQQSDIWSMGVVLFAMVY-GRLPFDD 118
++ NL+ G+ + +PE+L+ + DI+SMG V + ++ G+ PF D
Sbjct: 201 XXFRXNLNNP-SGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 256
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
Query: 27 HKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGSYAYASPEI 86
HK ++ HRDIK +N+LL + ++DFG A K+ + + G+ Y +PE+
Sbjct: 148 HKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKS---AGDTHGQVGTRRYMAPEV 204
Query: 87 LKGVPYTPQQS----DIWSMGVVLFAMV 110
L+G + + D+++MG+VL+ +
Sbjct: 205 LEGAINFQRDAFLRIDMYAMGLVLWELA 232
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
K ++ SQ+ ++Y K +HRD+ N+L++++ +K+ DFG + + +K
Sbjct: 115 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFK-- 172
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM 109
+ E + +PE L ++ SD+WS GVVL+ +
Sbjct: 173 VKEPGESPIFWYAPESLTESKFSV-ASDVWSFGVVLYEL 210
Score = 35.0 bits (79), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 232 DYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHR--VYIIMEYAKNGSLLEVIRKER-YI 288
++L+ F REIE++K L+H N++++ + R + +IMEY GSL + ++K + I
Sbjct: 53 EHLRDF-EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 111
Query: 289 DEDKALLCYSEV 300
D K L S++
Sbjct: 112 DHIKLLQYTSQI 123
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Query: 19 LADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCGS 78
++ + Y VHRD+ N+L++ K+SDFG +R D + T G
Sbjct: 133 ISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE----DDPEAAYTTRGGK 188
Query: 79 YA--YASPEILKGVPYTPQQSDIWSMGVVLFAMV-YGRLPFDDTNYSELLKQVQKRVVFP 135
+ +PE + +T SD+WS G+V++ +V YG P+ + +++K V++ P
Sbjct: 189 IPIRWTAPEAIAFRKFT-SASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLP 247
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 208 KLATSARHSQDVAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVY 267
+L + VAIK + KV + FL E ++ HPN+I + + V
Sbjct: 42 RLKLPGKRELPVAIKTL-KVGYTEKQRRDFL-GEASIMGQFDHPNIIHLEGVVTKSKPVM 99
Query: 268 IIMEYAKNGSLLEVIRK 284
I+ EY +NGSL ++K
Sbjct: 100 IVTEYMENGSLDTFLKK 116
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 58/137 (42%), Gaps = 34/137 (24%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKY-------------------------NIKLS 52
++ A++Y K S+ H D+K EN+LLDD Y IKL
Sbjct: 145 EILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLI 204
Query: 53 DFGFARKYSVNNTDYKQNLSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAMVYG 112
DFG A +K + + + Y +PE++ + + SD+WS G VL + G
Sbjct: 205 DFGCA--------TFKSDYHGSIINTRQYRAPEVILNLGWD-VSSDMWSFGCVLAELYTG 255
Query: 113 RLPFDDTNYSELLKQVQ 129
L F + E L ++
Sbjct: 256 SLLFRTHEHMEHLAMME 272
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 21/121 (17%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLD-------------DKYNIKLSDFGFARKYSVNN 64
Q+A + + H ++HRD+K +N+L+ + I +SDFG +K
Sbjct: 123 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182
Query: 65 TDYKQNLSETFCGSYAYASPEILKGVPYTPQQS------DIWSMGVVLFAMVY-GRLPFD 117
+ ++ NL+ G+ + +PE+L+ + DI+SMG V + ++ G+ PF
Sbjct: 183 SSFRTNLNNP-SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 241
Query: 118 D 118
D
Sbjct: 242 D 242
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
K ++ SQ+ ++Y K +HR++ N+L++++ +K+ DFG + + YK
Sbjct: 116 KLLQYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYK-- 173
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM 109
+ E + +PE L ++ SD+WS GVVL+ +
Sbjct: 174 VKEPGESPIFWYAPESLTESKFSV-ASDVWSFGVVLYEL 211
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 224 ISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHR--VYIIMEYAKNGSLLEV 281
+ K+Q + + REIE++K L+H N++++ + R + +IMEY GSL +
Sbjct: 45 VKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY 104
Query: 282 IRKER-YIDEDKALLCYSEV 300
++K + ID K L S++
Sbjct: 105 LQKHKERIDHIKLLQYTSQI 124
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
K ++ SQ+ ++Y K +HRD+ N+L++++ +K+ DFG + + K
Sbjct: 113 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK-- 170
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM 109
+ E + +PE L ++ SD+WS GVVL+ +
Sbjct: 171 VKEPGESPIFWYAPESLTESKFSV-ASDVWSFGVVLYEL 208
Score = 34.7 bits (78), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 232 DYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHR--VYIIMEYAKNGSLLEVIRKER-YI 288
++L+ F REIE++K L+H N++++ + R + +IMEY GSL + ++K + I
Sbjct: 51 EHLRDF-EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 109
Query: 289 DEDKALLCYSEV 300
D K L S++
Sbjct: 110 DHIKLLQYTSQI 121
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
K ++ SQ+ ++Y K +HRD+ N+L++++ +K+ DFG + + K
Sbjct: 115 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK-- 172
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM 109
+ E + +PE L ++ SD+WS GVVL+ +
Sbjct: 173 VKEPGESPIFWYAPESLTESKFSV-ASDVWSFGVVLYEL 210
Score = 34.7 bits (78), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 232 DYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHR--VYIIMEYAKNGSLLEVIRKER-YI 288
++L+ F REIE++K L+H N++++ + R + +IMEY GSL + ++K + I
Sbjct: 53 EHLRDF-EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 111
Query: 289 DEDKALLCYSEV 300
D K L S++
Sbjct: 112 DHIKLLQYTSQI 123
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
K ++ SQ+ ++Y K +HRD+ N+L++++ +K+ DFG + + K
Sbjct: 114 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK-- 171
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM 109
+ E + +PE L ++ SD+WS GVVL+ +
Sbjct: 172 VKEPGESPIFWYAPESLTESKFSV-ASDVWSFGVVLYEL 209
Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 232 DYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHR--VYIIMEYAKNGSLLEVIRKER-YI 288
++L+ F REIE++K L+H N++++ + R + +IMEY GSL + ++K + I
Sbjct: 52 EHLRDF-EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 110
Query: 289 DEDKALLCYSEV 300
D K L S++
Sbjct: 111 DHIKLLQYTSQI 122
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
K ++ SQ+ ++Y K +HRD+ N+L++++ +K+ DFG + + K
Sbjct: 119 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK-- 176
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM 109
+ E + +PE L ++ SD+WS GVVL+ +
Sbjct: 177 VKEPGESPIFWYAPESLTESKFS-VASDVWSFGVVLYEL 214
Score = 34.7 bits (78), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 232 DYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHR--VYIIMEYAKNGSLLEVIRKER-YI 288
++L+ F REIE++K L+H N++++ + R + +IMEY GSL + ++K + I
Sbjct: 57 EHLRDF-EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 115
Query: 289 DEDKALLCYSEV 300
D K L S++
Sbjct: 116 DHIKLLQYTSQI 127
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
K ++ SQ+ ++Y K +HRD+ N+L++++ +K+ DFG + + K
Sbjct: 133 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK-- 190
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM 109
+ E + +PE L ++ SD+WS GVVL+ +
Sbjct: 191 VKEPGESPIFWYAPESLTESKFSV-ASDVWSFGVVLYEL 228
Score = 34.7 bits (78), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 232 DYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHR--VYIIMEYAKNGSLLEVIRKER-YI 288
++L+ F REIE++K L+H N++++ + R + +IMEY GSL + ++K + I
Sbjct: 71 EHLRDF-EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 129
Query: 289 DEDKALLCYSEV 300
D K L S++
Sbjct: 130 DHIKLLQYTSQI 141
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 18 QLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQNLSETFCG 77
Q++ + Y + +VHRD+ N+L+ + +K+SDFG +R ++ K++
Sbjct: 158 QISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRI--- 214
Query: 78 SYAYASPEILKGVPYTPQQSDIWSMGVVLFAMV 110
+ + E L YT QSD+WS GV+L+ +V
Sbjct: 215 PVKWMAIESLFDHIYT-TQSDVWSFGVLLWEIV 246
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 219 VAIKIISKVQAPIDYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHRVYIIMEYAKNGSL 278
VA+K++ + +P + L+ L E V+K + HP++I+ A + +I+EYAK GSL
Sbjct: 56 VAVKMLKENASPSE-LRDLL-SEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 279 LEVIRKERYI 288
+R+ R +
Sbjct: 114 RGFLRESRKV 123
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
K ++ SQ+ ++Y K +HRD+ N+L++++ +K+ DFG + + K
Sbjct: 115 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK-- 172
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM 109
+ E + +PE L ++ SD+WS GVVL+ +
Sbjct: 173 VKEPGESPIFWYAPESLTESKFSV-ASDVWSFGVVLYEL 210
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 232 DYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHR--VYIIMEYAKNGSLLEVIRKER-YI 288
++L+ F REIE++K L+H N++++ + R + +IMEY GSL + ++K + I
Sbjct: 53 EHLRDF-EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 111
Query: 289 DEDKALLCYSEV 300
D K L S++
Sbjct: 112 DHIKLLQYTSQI 123
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
K ++ SQ+ ++Y K +HRD+ N+L++++ +K+ DFG + + K
Sbjct: 118 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK-- 175
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM 109
+ E + +PE L ++ SD+WS GVVL+ +
Sbjct: 176 VKEPGESPIFWYAPESLTESKFSV-ASDVWSFGVVLYEL 213
Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 232 DYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHR--VYIIMEYAKNGSLLEVIRKER-YI 288
++L+ F REIE++K L+H N++++ + R + +IMEY GSL + ++K + I
Sbjct: 56 EHLRDF-EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 114
Query: 289 DEDKALLCYSEV 300
D K L S++
Sbjct: 115 DHIKLLQYTSQI 126
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
K ++ SQ+ ++Y K +HRD+ N+L++++ +K+ DFG + + K
Sbjct: 133 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK-- 190
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM 109
+ E + +PE L ++ SD+WS GVVL+ +
Sbjct: 191 VKEPGESPIFWYAPESLTESKFSV-ASDVWSFGVVLYEL 228
Score = 35.0 bits (79), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 232 DYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHR--VYIIMEYAKNGSLLEVIRKER-YI 288
++L+ F REIE++K L+H N++++ + R + +IMEY GSL + ++K + I
Sbjct: 71 EHLRDF-EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 129
Query: 289 DEDKALLCYSEV 300
D K L S++
Sbjct: 130 DHIKLLQYTSQI 141
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
K ++ SQ+ ++Y K +HRD+ N+L++++ +K+ DFG + + K
Sbjct: 146 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK-- 203
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM 109
+ E + +PE L ++ SD+WS GVVL+ +
Sbjct: 204 VKEPGESPIFWYAPESLTESKFS-VASDVWSFGVVLYEL 241
Score = 35.0 bits (79), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 232 DYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHR--VYIIMEYAKNGSLLEVIRKER-YI 288
++L+ F REIE++K L+H N++++ + R + +IMEY GSL + ++K + I
Sbjct: 84 EHLRDF-EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 142
Query: 289 DEDKALLCYSEV 300
D K L S++
Sbjct: 143 DHIKLLQYTSQI 154
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 11 KARRWFSQLADAIDYCHKKSVVHRDIKCENLLLDDKYNIKLSDFGFARKYSVNNTDYKQN 70
K ++ SQ+ ++Y K +HRD+ N+L++++ +K+ DFG + + K
Sbjct: 118 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK-- 175
Query: 71 LSETFCGSYAYASPEILKGVPYTPQQSDIWSMGVVLFAM 109
+ E + +PE L ++ SD+WS GVVL+ +
Sbjct: 176 VKEPGESPIFWYAPESLTESKFS-VASDVWSFGVVLYEL 213
Score = 34.7 bits (78), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 232 DYLKKFLPREIEVVKGLKHPNLIRFLQAIETTHR--VYIIMEYAKNGSLLEVIRKER-YI 288
++L+ F REIE++K L+H N++++ + R + +IME+ GSL E ++K + I
Sbjct: 56 EHLRDF-EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERI 114
Query: 289 DEDKALLCYSEV 300
D K L S++
Sbjct: 115 DHIKLLQYTSQI 126
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,600,046
Number of Sequences: 62578
Number of extensions: 379418
Number of successful extensions: 3798
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 731
Number of HSP's gapped (non-prelim): 1835
length of query: 347
length of database: 14,973,337
effective HSP length: 100
effective length of query: 247
effective length of database: 8,715,537
effective search space: 2152737639
effective search space used: 2152737639
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)