Query psy10463
Match_columns 605
No_of_seqs 686 out of 4239
Neff 8.7
Searched_HMMs 46136
Date Fri Aug 16 18:52:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10463.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10463hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3736|consensus 100.0 4.4E-92 9.6E-97 745.1 26.6 436 46-604 98-534 (578)
2 KOG3738|consensus 100.0 3.8E-91 8.2E-96 681.8 18.9 432 45-602 80-513 (559)
3 KOG3737|consensus 100.0 3.7E-82 7.9E-87 616.9 21.6 432 48-604 114-558 (603)
4 cd02510 pp-GalNAc-T pp-GalNAc- 100.0 9E-50 2E-54 410.0 31.8 298 201-502 1-299 (299)
5 cd04184 GT2_RfbC_Mx_like Myxoc 100.0 3.5E-27 7.7E-32 227.6 18.4 198 198-425 1-199 (202)
6 cd02520 Glucosylceramide_synth 99.9 1.1E-26 2.3E-31 223.6 19.9 174 198-428 1-178 (196)
7 COG1216 Predicted glycosyltran 99.9 2.1E-26 4.6E-31 236.9 19.5 219 197-432 2-225 (305)
8 cd06437 CESA_CaSu_A2 Cellulose 99.9 3.3E-26 7.1E-31 226.3 17.7 210 198-429 1-215 (232)
9 KOG3736|consensus 99.9 6.6E-27 1.4E-31 249.0 12.3 376 123-604 175-574 (578)
10 cd06435 CESA_NdvC_like NdvC_li 99.9 1.5E-25 3.3E-30 221.9 17.8 206 201-427 1-209 (236)
11 cd04195 GT2_AmsE_like GT2_AmsE 99.9 1E-25 2.3E-30 217.2 15.6 198 201-426 1-200 (201)
12 cd06427 CESA_like_2 CESA_like_ 99.9 1.3E-25 2.9E-30 223.3 16.3 207 198-424 1-209 (241)
13 cd06420 GT2_Chondriotin_Pol_N 99.9 7.3E-25 1.6E-29 207.8 20.4 180 202-428 1-182 (182)
14 PF10111 Glyco_tranf_2_2: Glyc 99.9 8.3E-25 1.8E-29 222.2 20.5 214 201-431 1-226 (281)
15 cd06421 CESA_CelA_like CESA_Ce 99.9 3.8E-25 8.3E-30 218.4 17.0 210 198-428 1-212 (234)
16 PRK11204 N-glycosyltransferase 99.9 9.7E-25 2.1E-29 235.1 20.3 210 195-428 51-261 (420)
17 cd06913 beta3GnTL1_like Beta 1 99.9 9.1E-25 2E-29 213.9 18.2 206 202-429 1-211 (219)
18 cd04185 GT_2_like_b Subfamily 99.9 2E-24 4.3E-29 208.6 19.2 174 202-431 1-177 (202)
19 PF13641 Glyco_tranf_2_3: Glyc 99.9 7.6E-25 1.6E-29 215.7 15.9 208 198-429 1-212 (228)
20 cd02525 Succinoglycan_BP_ExoA 99.9 3.1E-24 6.8E-29 213.7 20.2 210 199-429 1-210 (249)
21 PRK14583 hmsR N-glycosyltransf 99.9 4.4E-24 9.5E-29 230.8 21.4 209 196-428 73-282 (444)
22 TIGR03111 glyc2_xrt_Gpos1 puta 99.9 3E-24 6.5E-29 231.5 19.0 218 196-428 47-268 (439)
23 TIGR01556 rhamnosyltran L-rham 99.9 7.1E-24 1.5E-28 215.9 19.8 198 205-430 1-204 (281)
24 cd02526 GT2_RfbF_like RfbF is 99.9 1.1E-23 2.4E-28 208.6 20.0 201 202-431 1-208 (237)
25 TIGR03469 HonB hopene-associat 99.9 2.3E-24 5E-29 228.6 15.9 213 195-425 37-260 (384)
26 PRK10018 putative glycosyl tra 99.9 3.2E-23 6.9E-28 208.9 22.0 202 196-427 3-207 (279)
27 cd06433 GT_2_WfgS_like WfgS an 99.9 1.7E-23 3.7E-28 201.0 19.0 195 201-429 1-196 (202)
28 cd04186 GT_2_like_c Subfamily 99.9 4.4E-23 9.5E-28 191.8 19.7 165 202-428 1-166 (166)
29 cd04192 GT_2_like_e Subfamily 99.9 2.7E-23 5.9E-28 204.2 17.9 201 202-423 1-205 (229)
30 cd06442 DPM1_like DPM1_like re 99.9 1.6E-23 3.4E-28 205.5 16.0 202 202-429 1-205 (224)
31 TIGR03472 HpnI hopanoid biosyn 99.9 1.4E-23 3.1E-28 221.8 16.0 210 196-426 39-252 (373)
32 PLN02726 dolichyl-phosphate be 99.9 3.7E-23 8E-28 206.0 16.4 214 196-430 7-221 (243)
33 cd02522 GT_2_like_a GT_2_like_ 99.9 2E-22 4.3E-27 197.3 20.9 186 200-427 1-186 (221)
34 PRK10073 putative glycosyl tra 99.9 1.5E-22 3.2E-27 209.7 19.7 214 196-429 4-218 (328)
35 cd06439 CESA_like_1 CESA_like_ 99.9 1.1E-22 2.4E-27 203.3 17.9 207 194-429 25-231 (251)
36 cd04196 GT_2_like_d Subfamily 99.9 1E-22 2.2E-27 198.0 16.6 202 201-427 1-203 (214)
37 PRK11498 bcsA cellulose syntha 99.9 3E-22 6.6E-27 225.4 21.5 211 195-427 257-469 (852)
38 TIGR03030 CelA cellulose synth 99.9 6.4E-22 1.4E-26 224.4 19.4 215 195-427 128-358 (713)
39 PRK10063 putative glycosyl tra 99.9 3.7E-21 8.1E-26 191.5 22.3 191 198-426 1-195 (248)
40 KOG3737|consensus 99.9 1.1E-21 2.4E-26 193.2 14.3 386 124-603 189-598 (603)
41 cd06434 GT2_HAS Hyaluronan syn 99.9 1.2E-21 2.7E-26 193.6 13.3 205 199-427 1-213 (235)
42 PF00535 Glycos_transf_2: Glyc 99.8 1.2E-20 2.6E-25 175.1 14.7 169 201-389 1-169 (169)
43 cd04188 DPG_synthase DPG_synth 99.8 3.3E-20 7.1E-25 180.5 15.1 200 202-422 1-203 (211)
44 cd04179 DPM_DPG-synthase_like 99.8 1E-20 2.2E-25 179.6 9.8 182 202-409 1-185 (185)
45 COG1215 Glycosyltransferases, 99.8 2.4E-19 5.2E-24 194.3 17.9 210 197-425 53-263 (439)
46 cd06423 CESA_like CESA_like is 99.8 1.5E-19 3.2E-24 168.6 12.6 179 202-402 1-180 (180)
47 cd04187 DPM1_like_bac Bacteria 99.8 2.5E-19 5.5E-24 169.8 13.3 179 202-408 1-180 (181)
48 cd04190 Chitin_synth_C C-termi 99.8 1.1E-18 2.3E-23 173.9 13.7 191 202-428 1-223 (244)
49 cd06438 EpsO_like EpsO protein 99.8 7.4E-19 1.6E-23 167.1 8.4 178 202-405 1-183 (183)
50 PTZ00260 dolichyl-phosphate be 99.7 2.9E-17 6.3E-22 170.4 16.8 209 195-422 67-287 (333)
51 KOG2978|consensus 99.7 5.4E-17 1.2E-21 145.5 15.5 212 197-431 2-217 (238)
52 cd04191 Glucan_BSP_ModH Glucan 99.7 8.7E-17 1.9E-21 160.1 17.3 206 200-424 1-228 (254)
53 PRK10073 putative glycosyl tra 99.7 1.7E-17 3.6E-22 172.0 11.9 97 88-190 4-100 (328)
54 PRK10018 putative glycosyl tra 99.7 3.1E-17 6.7E-22 165.5 12.5 98 87-190 2-100 (279)
55 PRK14716 bacteriophage N4 adso 99.7 1.9E-16 4.1E-21 170.7 19.1 207 195-425 63-287 (504)
56 cd06436 GlcNAc-1-P_transferase 99.7 4.4E-17 9.5E-22 156.0 12.5 112 202-320 1-126 (191)
57 PRK13915 putative glucosyl-3-p 99.7 6.1E-17 1.3E-21 165.7 13.4 205 196-420 29-238 (306)
58 cd02510 pp-GalNAc-T pp-GalNAc- 99.7 8.1E-17 1.8E-21 165.5 13.0 101 93-193 1-101 (299)
59 KOG3738|consensus 99.7 1.2E-17 2.7E-22 165.3 6.4 345 151-604 180-555 (559)
60 cd06427 CESA_like_2 CESA_like_ 99.7 1.8E-16 4E-21 157.5 10.3 101 90-192 1-101 (241)
61 PRK10714 undecaprenyl phosphat 99.7 1.3E-15 2.7E-20 157.7 16.7 118 196-318 4-124 (325)
62 cd04184 GT2_RfbC_Mx_like Myxoc 99.7 7.1E-16 1.5E-20 148.6 11.8 100 90-192 1-100 (202)
63 PRK10063 putative glycosyl tra 99.6 1.4E-15 3E-20 151.5 14.1 93 90-189 1-96 (248)
64 cd04195 GT2_AmsE_like GT2_AmsE 99.6 9.6E-16 2.1E-20 147.6 10.6 94 93-190 1-95 (201)
65 cd02520 Glucosylceramide_synth 99.6 1.7E-15 3.6E-20 145.7 11.1 99 90-192 1-103 (196)
66 cd04196 GT_2_like_d Subfamily 99.6 1.5E-15 3.1E-20 147.5 10.2 94 93-190 1-94 (214)
67 cd06437 CESA_CaSu_A2 Cellulose 99.6 1.9E-15 4.1E-20 149.3 11.1 101 90-193 1-105 (232)
68 cd00761 Glyco_tranf_GTA_type G 99.6 1.7E-14 3.8E-19 130.8 16.4 153 202-416 1-154 (156)
69 PF00535 Glycos_transf_2: Glyc 99.6 4.1E-15 8.8E-20 137.7 12.3 94 93-191 1-94 (169)
70 PLN02726 dolichyl-phosphate be 99.6 4.7E-15 1E-19 147.6 11.2 104 87-192 6-110 (243)
71 TIGR03111 glyc2_xrt_Gpos1 puta 99.6 8.5E-15 1.8E-19 158.1 13.1 103 87-192 46-148 (439)
72 PTZ00260 dolichyl-phosphate be 99.6 1.9E-14 4.1E-19 149.4 14.7 102 87-190 67-177 (333)
73 TIGR03469 HonB hopene-associat 99.6 6.9E-15 1.5E-19 156.2 11.6 103 87-192 37-150 (384)
74 cd06439 CESA_like_1 CESA_like_ 99.6 1.2E-14 2.7E-19 145.1 12.6 101 87-192 26-126 (251)
75 cd02511 Beta4Glucosyltransfera 99.6 2.1E-14 4.6E-19 141.5 14.1 101 199-313 1-101 (229)
76 cd06913 beta3GnTL1_like Beta 1 99.6 7.8E-15 1.7E-19 143.5 10.5 95 94-191 1-100 (219)
77 cd06435 CESA_NdvC_like NdvC_li 99.6 1.2E-14 2.5E-19 143.9 10.6 98 93-192 1-101 (236)
78 cd06421 CESA_CelA_like CESA_Ce 99.6 1.5E-14 3.2E-19 142.7 11.0 100 90-192 1-101 (234)
79 PRK11234 nfrB bacteriophage N4 99.6 5.9E-14 1.3E-18 157.6 16.8 205 195-423 60-282 (727)
80 PRK10714 undecaprenyl phosphat 99.6 1.9E-14 4.1E-19 148.9 11.5 99 88-190 4-105 (325)
81 COG0463 WcaA Glycosyltransfera 99.5 2.1E-14 4.5E-19 137.8 10.5 96 89-190 2-97 (291)
82 PRK14583 hmsR N-glycosyltransf 99.5 2.6E-14 5.7E-19 154.8 12.0 99 87-190 72-170 (444)
83 PRK13915 putative glucosyl-3-p 99.5 2.2E-14 4.7E-19 146.9 10.7 105 87-193 28-134 (306)
84 PRK11204 N-glycosyltransferase 99.5 2.8E-14 6.2E-19 153.8 11.9 100 87-191 51-150 (420)
85 PRK05454 glucosyltransferase M 99.5 9.1E-14 2E-18 155.3 16.0 210 195-422 121-351 (691)
86 cd06442 DPM1_like DPM1_like re 99.5 2E-14 4.3E-19 140.9 9.5 94 94-191 1-94 (224)
87 cd04188 DPG_synthase DPG_synth 99.5 1.6E-14 3.5E-19 140.4 8.7 95 94-190 1-97 (211)
88 cd06433 GT_2_WfgS_like WfgS an 99.5 3.2E-14 6.8E-19 136.4 10.3 91 93-191 1-91 (202)
89 COG0463 WcaA Glycosyltransfera 99.5 7.1E-14 1.5E-18 134.0 12.0 107 197-309 2-108 (291)
90 TIGR03472 HpnI hopanoid biosyn 99.5 6.5E-14 1.4E-18 148.2 12.2 103 87-193 38-144 (373)
91 cd02511 Beta4Glucosyltransfera 99.5 1.6E-13 3.5E-18 135.3 12.5 85 91-189 1-85 (229)
92 cd04187 DPM1_like_bac Bacteria 99.5 1.6E-13 3.6E-18 129.8 10.0 96 94-192 1-97 (181)
93 cd06423 CESA_like CESA_like is 99.5 1.4E-13 3.1E-18 128.0 8.8 95 94-192 1-95 (180)
94 cd04192 GT_2_like_e Subfamily 99.5 2E-13 4.3E-18 133.9 9.9 96 94-192 1-99 (229)
95 cd06420 GT2_Chondriotin_Pol_N 99.5 3E-13 6.6E-18 127.9 10.5 95 94-192 1-96 (182)
96 PF13712 Glyco_tranf_2_5: Glyc 99.5 1.3E-12 2.8E-17 126.9 14.8 186 200-428 1-198 (217)
97 cd02525 Succinoglycan_BP_ExoA 99.4 4.2E-13 9.1E-18 133.4 10.8 98 91-192 1-98 (249)
98 PRK15489 nfrB bacteriophage N4 99.4 1.8E-12 3.9E-17 143.9 16.8 197 195-418 68-285 (703)
99 cd06438 EpsO_like EpsO protein 99.4 3.6E-13 7.9E-18 127.9 9.5 93 94-192 1-98 (183)
100 cd04179 DPM_DPG-synthase_like 99.4 3.1E-13 6.7E-18 128.1 8.8 96 94-192 1-96 (185)
101 TIGR03030 CelA cellulose synth 99.4 8.4E-13 1.8E-17 150.3 13.3 106 87-194 128-247 (713)
102 cd06434 GT2_HAS Hyaluronan syn 99.4 7.2E-13 1.6E-17 130.8 11.0 95 91-193 1-95 (235)
103 cd04185 GT_2_like_b Subfamily 99.4 5E-13 1.1E-17 128.8 9.0 93 94-192 1-96 (202)
104 cd06436 GlcNAc-1-P_transferase 99.4 5.6E-13 1.2E-17 127.5 8.9 92 94-192 1-106 (191)
105 PRK11498 bcsA cellulose syntha 99.4 1E-12 2.2E-17 148.9 11.9 111 87-204 257-374 (852)
106 cd02522 GT_2_like_a GT_2_like_ 99.4 8.4E-13 1.8E-17 129.0 8.5 90 92-193 1-90 (221)
107 KOG2978|consensus 99.4 1.4E-12 3E-17 117.4 7.9 102 89-192 2-105 (238)
108 cd00899 b4GalT Beta-4-Galactos 99.3 2.7E-11 5.9E-16 115.4 15.3 159 199-430 3-170 (219)
109 cd02526 GT2_RfbF_like RfbF is 99.3 4.6E-12 9.9E-17 125.3 9.8 90 94-193 1-93 (237)
110 PF13641 Glyco_tranf_2_3: Glyc 99.3 1.2E-12 2.6E-17 128.7 4.9 99 90-192 1-103 (228)
111 cd04186 GT_2_like_c Subfamily 99.3 5.9E-12 1.3E-16 116.6 8.8 90 94-191 1-90 (166)
112 COG1215 Glycosyltransferases, 99.3 1E-11 2.2E-16 134.7 11.5 102 89-193 53-155 (439)
113 KOG2977|consensus 99.2 2.3E-11 5E-16 116.9 8.6 95 91-187 68-169 (323)
114 KOG2977|consensus 99.2 3.2E-11 6.9E-16 115.9 8.6 113 196-309 65-186 (323)
115 cd02514 GT13_GLCNAC-TI GT13_GL 99.2 1.7E-10 3.7E-15 117.8 14.3 185 200-429 2-211 (334)
116 cd04190 Chitin_synth_C C-termi 99.1 5.6E-11 1.2E-15 118.3 6.3 75 94-192 1-90 (244)
117 COG1216 Predicted glycosyltran 99.1 9.1E-10 2E-14 113.4 13.2 93 89-189 2-98 (305)
118 PF13506 Glyco_transf_21: Glyc 99.1 5.8E-10 1.3E-14 104.8 9.8 143 261-424 5-151 (175)
119 TIGR01556 rhamnosyltran L-rham 99.1 2.3E-10 5E-15 116.5 7.7 84 97-190 1-88 (281)
120 KOG3588|consensus 99.1 6.7E-09 1.4E-13 103.0 16.7 212 196-431 227-441 (494)
121 PF10111 Glyco_tranf_2_2: Glyc 99.0 2.9E-09 6.3E-14 108.3 14.5 94 93-190 1-103 (281)
122 PRK14716 bacteriophage N4 adso 99.0 1.2E-09 2.6E-14 118.3 12.1 102 87-193 63-176 (504)
123 COG4092 Predicted glycosyltran 99.0 5.2E-09 1.1E-13 99.5 12.7 212 197-428 1-229 (346)
124 PF13632 Glyco_trans_2_3: Glyc 99.0 2.2E-09 4.7E-14 102.7 10.6 125 286-428 1-125 (193)
125 PF02709 Glyco_transf_7C: N-te 99.0 3.8E-10 8.2E-15 90.3 4.2 59 370-428 16-75 (78)
126 PF00652 Ricin_B_lectin: Ricin 99.0 9E-10 2E-14 97.1 6.5 83 513-604 1-87 (124)
127 cd04191 Glucan_BSP_ModH Glucan 98.9 6.7E-09 1.4E-13 103.6 11.9 99 92-192 1-112 (254)
128 cd00161 RICIN Ricin-type beta- 98.9 4.6E-09 1E-13 92.1 8.2 81 515-604 1-84 (124)
129 PRK11234 nfrB bacteriophage N4 98.9 1.3E-08 2.8E-13 114.9 11.9 102 87-193 60-173 (727)
130 PF14200 RicinB_lectin_2: Rici 98.8 6.4E-09 1.4E-13 89.1 6.6 85 514-603 16-105 (105)
131 cd00761 Glyco_tranf_GTA_type G 98.8 2.9E-08 6.2E-13 89.6 10.0 94 94-192 1-94 (156)
132 cd00161 RICIN Ricin-type beta- 98.8 1.5E-08 3.3E-13 88.7 8.0 81 514-602 43-124 (124)
133 PRK05454 glucosyltransferase M 98.7 1.2E-07 2.6E-12 106.6 13.2 105 87-192 121-237 (691)
134 KOG2547|consensus 98.7 1.4E-07 2.9E-12 94.4 11.6 202 195-419 82-289 (431)
135 KOG3916|consensus 98.7 2.4E-07 5.1E-12 91.8 12.9 149 197-418 150-305 (372)
136 smart00458 RICIN Ricin-type be 98.7 5.7E-08 1.2E-12 84.6 7.8 78 514-602 38-116 (117)
137 PF05679 CHGN: Chondroitin N-a 98.6 2E-06 4.4E-11 93.9 20.1 210 197-431 246-471 (499)
138 smart00458 RICIN Ricin-type be 98.6 1.4E-07 3E-12 82.2 7.6 72 521-604 5-77 (117)
139 PRK15489 nfrB bacteriophage N4 98.6 2.8E-07 6.1E-12 103.0 10.5 97 87-191 68-179 (703)
140 PF00652 Ricin_B_lectin: Ricin 98.4 2.9E-07 6.3E-12 80.9 5.7 77 515-600 46-124 (124)
141 PLN02893 Cellulose synthase-li 98.4 1.4E-05 3E-10 88.9 17.4 188 87-311 98-327 (734)
142 cd02514 GT13_GLCNAC-TI GT13_GL 98.3 4.6E-06 1E-10 85.6 12.0 96 92-193 2-115 (334)
143 PF11397 GlcNAc: Glycosyltrans 98.2 7E-05 1.5E-09 77.4 18.5 224 200-430 2-265 (343)
144 PF03071 GNT-I: GNT-I family; 97.9 0.00067 1.5E-08 71.5 17.1 192 196-430 91-307 (434)
145 PF03142 Chitin_synth_2: Chiti 97.8 7.5E-05 1.6E-09 80.9 10.2 135 277-427 195-355 (527)
146 PF03452 Anp1: Anp1; InterPro 97.3 0.0028 6E-08 62.7 11.3 119 196-320 23-176 (269)
147 PF13704 Glyco_tranf_2_4: Glyc 96.9 0.0067 1.4E-07 50.7 9.2 82 207-299 1-87 (97)
148 PLN02189 cellulose synthase 96.9 0.015 3.3E-07 67.0 14.4 202 88-311 329-561 (1040)
149 PF14200 RicinB_lectin_2: Rici 96.9 0.0014 3E-08 55.9 4.5 51 553-603 1-57 (105)
150 PF13896 Glyco_transf_49: Glyc 96.8 0.0089 1.9E-07 61.7 11.2 156 269-429 113-284 (317)
151 PLN02638 cellulose synthase A 96.7 0.084 1.8E-06 61.3 18.4 203 87-311 346-579 (1079)
152 PLN02195 cellulose synthase A 96.5 0.028 6E-07 64.6 13.0 203 87-311 249-482 (977)
153 PF13704 Glyco_tranf_2_4: Glyc 96.5 0.013 2.9E-07 48.9 8.2 79 99-188 1-84 (97)
154 PF13712 Glyco_tranf_2_5: Glyc 96.4 0.017 3.8E-07 56.1 8.9 68 92-189 1-68 (217)
155 KOG3917|consensus 96.3 0.014 3E-07 54.9 7.4 45 372-416 180-224 (310)
156 PF11735 CAP59_mtransfer: Cryp 96.2 0.11 2.4E-06 51.0 13.6 202 203-413 5-241 (241)
157 PF09488 Osmo_MPGsynth: Mannos 96.0 0.098 2.1E-06 53.3 12.2 107 197-310 49-185 (381)
158 KOG2547|consensus 95.9 0.05 1.1E-06 55.4 9.8 100 87-190 82-185 (431)
159 PF11316 Rhamno_transf: Putati 95.4 0.11 2.4E-06 50.9 10.0 90 215-309 45-140 (234)
160 TIGR02460 osmo_MPGsynth mannos 95.1 0.34 7.3E-06 49.2 12.2 108 197-311 49-186 (381)
161 PRK14503 mannosyl-3-phosphogly 95.0 0.33 7.2E-06 49.5 12.1 108 197-311 50-187 (393)
162 PLN02190 cellulose synthase-li 94.9 0.24 5.2E-06 55.8 11.8 192 87-311 90-315 (756)
163 KOG2571|consensus 94.8 0.023 4.9E-07 64.5 3.6 139 271-428 426-579 (862)
164 PF09258 Glyco_transf_64: Glyc 94.7 0.062 1.3E-06 53.3 6.0 108 200-317 1-109 (247)
165 COG2943 MdoH Membrane glycosyl 94.6 0.21 4.6E-06 53.2 9.9 207 196-422 142-371 (736)
166 PF13733 Glyco_transf_7N: N-te 94.1 0.21 4.5E-06 44.0 7.2 75 198-300 47-128 (136)
167 PLN02436 cellulose synthase A 94.0 1.2 2.5E-05 52.2 14.9 196 87-311 362-595 (1094)
168 PLN02400 cellulose synthase 94.0 0.58 1.3E-05 54.7 12.5 203 87-311 353-586 (1085)
169 COG1209 RfbA dTDP-glucose pyro 93.5 5.5 0.00012 39.6 16.5 189 203-420 25-214 (286)
170 PF03452 Anp1: Anp1; InterPro 93.4 0.52 1.1E-05 46.9 9.6 101 87-188 22-155 (269)
171 PF03214 RGP: Reversibly glyco 93.4 0.13 2.8E-06 51.9 5.3 113 198-318 8-126 (348)
172 PF01762 Galactosyl_T: Galacto 93.3 1.1 2.4E-05 42.6 11.6 161 231-416 21-191 (195)
173 PF09488 Osmo_MPGsynth: Mannos 93.2 0.98 2.1E-05 46.2 11.1 95 89-189 49-173 (381)
174 PF03071 GNT-I: GNT-I family; 93.1 0.33 7.1E-06 51.6 8.1 101 87-193 90-209 (434)
175 PRK14502 bifunctional mannosyl 92.2 1.6 3.4E-05 49.2 12.2 108 197-311 54-191 (694)
176 PLN02917 CMP-KDO synthetase 91.8 9 0.0002 39.1 16.5 184 212-420 73-266 (293)
177 PLN02915 cellulose synthase A 91.7 2.3 4.9E-05 49.8 13.1 194 88-310 285-516 (1044)
178 COG4092 Predicted glycosyltran 91.7 0.76 1.7E-05 44.9 7.8 96 89-188 1-107 (346)
179 KOG1413|consensus 91.7 1.8 3.8E-05 44.2 10.7 109 193-307 62-191 (411)
180 PF04666 Glyco_transf_54: N-Ac 91.5 1 2.3E-05 45.8 9.1 46 264-311 152-197 (297)
181 PRK15480 glucose-1-phosphate t 91.4 13 0.00029 37.8 17.4 101 203-311 28-129 (292)
182 TIGR02460 osmo_MPGsynth mannos 91.4 5.1 0.00011 41.0 13.6 94 89-188 49-172 (381)
183 cd06915 NTP_transferase_WcbM_l 91.4 14 0.0003 35.4 18.9 92 212-313 30-124 (223)
184 PLN02248 cellulose synthase-li 91.3 5.6 0.00012 47.0 15.7 56 87-142 364-422 (1135)
185 PF06306 CgtA: Beta-1,4-N-acet 90.5 1.2 2.6E-05 44.8 8.2 118 199-323 88-215 (347)
186 cd00218 GlcAT-I Beta1,3-glucur 90.4 1.9 4.2E-05 41.5 9.3 98 198-304 1-116 (223)
187 PF00483 NTP_transferase: Nucl 90.4 2.7 6E-05 41.3 11.1 100 204-313 25-131 (248)
188 TIGR00466 kdsB 3-deoxy-D-manno 90.3 18 0.00039 35.6 16.7 183 212-420 25-222 (238)
189 PF12804 NTP_transf_3: MobA-li 90.3 1.8 4E-05 39.4 9.0 95 212-319 25-122 (160)
190 cd06425 M1P_guanylylT_B_like_N 89.8 8.8 0.00019 37.4 14.0 96 212-313 32-129 (233)
191 PF05060 MGAT2: N-acetylglucos 89.7 6.6 0.00014 40.7 13.1 55 375-429 233-292 (356)
192 COG1213 Predicted sugar nucleo 89.4 1.1 2.4E-05 43.4 6.7 88 212-308 32-121 (239)
193 PRK14503 mannosyl-3-phosphogly 89.1 11 0.00023 38.9 13.8 94 89-188 50-173 (393)
194 PRK05450 3-deoxy-manno-octulos 89.0 17 0.00036 35.7 15.5 94 212-316 28-124 (245)
195 cd04182 GT_2_like_f GT_2_like_ 88.5 4.6 9.9E-05 37.5 10.5 97 212-319 27-127 (186)
196 PF06306 CgtA: Beta-1,4-N-acet 88.4 1.3 2.8E-05 44.6 6.7 91 91-188 88-188 (347)
197 PLN02458 transferase, transfer 88.4 2.8 6E-05 42.6 9.0 101 197-304 111-223 (346)
198 COG1208 GCD1 Nucleoside-diphos 88.3 35 0.00076 35.9 17.9 96 204-311 27-125 (358)
199 TIGR01207 rmlA glucose-1-phosp 88.1 23 0.0005 35.9 16.0 101 203-311 24-125 (286)
200 cd06428 M1P_guanylylT_A_like_N 87.5 12 0.00026 37.1 13.4 103 204-313 26-131 (257)
201 TIGR03310 matur_ygfJ molybdenu 87.4 5.3 0.00011 37.3 10.3 97 212-318 26-125 (188)
202 cd02517 CMP-KDO-Synthetase CMP 86.9 27 0.00059 34.0 15.4 87 212-311 27-118 (239)
203 PF03552 Cellulose_synt: Cellu 85.6 10 0.00022 42.9 12.5 56 256-312 165-230 (720)
204 cd02540 GT2_GlmU_N_bac N-termi 85.5 12 0.00025 36.3 11.9 92 212-314 27-121 (229)
205 KOG1476|consensus 85.2 6.7 0.00015 39.5 9.7 99 197-303 86-201 (330)
206 PRK00317 mobA molybdopterin-gu 84.8 5.3 0.00012 37.7 8.8 88 212-315 31-121 (193)
207 cd02509 GDP-M1P_Guanylyltransf 84.3 48 0.001 33.3 16.2 86 204-297 27-116 (274)
208 PLN03180 reversibly glycosylat 83.8 1.9 4.1E-05 43.9 5.3 30 271-300 81-110 (346)
209 cd04181 NTP_transferase NTP_tr 82.2 24 0.00052 33.6 12.4 94 212-312 30-123 (217)
210 PF03498 CDtoxinA: Cytolethal 82.0 1.4 3E-05 39.9 3.3 82 514-604 53-143 (150)
211 TIGR03202 pucB xanthine dehydr 81.5 20 0.00043 33.6 11.3 99 212-317 27-130 (190)
212 PRK14502 bifunctional mannosyl 80.2 40 0.00088 38.3 14.4 93 89-187 54-176 (694)
213 cd02503 MobA MobA catalyzes th 79.6 14 0.0003 34.3 9.5 90 212-318 27-118 (181)
214 cd02513 CMP-NeuAc_Synthase CMP 78.4 51 0.0011 31.6 13.4 99 212-320 27-135 (223)
215 cd04189 G1P_TT_long G1P_TT_lon 78.3 68 0.0015 31.0 19.3 92 212-311 32-124 (236)
216 COG2943 MdoH Membrane glycosyl 78.0 30 0.00065 37.6 11.8 102 87-189 141-254 (736)
217 cd02518 GT2_SpsF SpsF is a gly 77.8 24 0.00051 34.4 10.8 94 212-315 25-120 (233)
218 PF13733 Glyco_transf_7N: N-te 77.3 12 0.00026 33.2 7.4 70 91-188 48-124 (136)
219 TIGR03584 PseF pseudaminic aci 76.9 75 0.0016 30.8 15.0 91 212-312 25-124 (222)
220 cd06422 NTP_transferase_like_1 76.1 45 0.00097 32.0 12.2 94 204-309 25-121 (221)
221 PF11316 Rhamno_transf: Putati 75.6 10 0.00023 37.2 7.5 78 109-190 47-129 (234)
222 TIGR02665 molyb_mobA molybdopt 75.3 25 0.00055 32.7 9.9 88 212-313 28-118 (186)
223 cd06426 NTP_transferase_like_2 74.8 80 0.0017 30.1 17.9 176 204-420 24-202 (220)
224 TIGR03552 F420_cofC 2-phospho- 74.4 28 0.00061 32.8 10.1 93 212-319 31-126 (195)
225 PRK13385 2-C-methyl-D-erythrit 74.3 26 0.00056 34.1 10.0 92 212-312 31-127 (230)
226 cd02538 G1P_TT_short G1P_TT_sh 73.9 91 0.002 30.3 15.7 91 212-310 32-125 (240)
227 cd02508 ADP_Glucose_PP ADP-glu 73.8 79 0.0017 29.8 13.1 100 203-313 23-139 (200)
228 cd06431 GT8_LARGE_C LARGE cata 72.5 50 0.0011 33.4 11.8 104 200-308 3-121 (280)
229 PLN02899 alpha-galactosidase 71.0 4.7 0.0001 44.6 4.1 79 514-595 475-558 (633)
230 PRK13368 3-deoxy-manno-octulos 70.9 44 0.00096 32.5 10.9 90 212-312 28-118 (238)
231 cd00505 Glyco_transf_8 Members 69.1 72 0.0016 31.4 12.0 92 212-307 14-118 (246)
232 COG2068 Uncharacterized MobA-r 68.4 67 0.0014 30.6 10.6 97 213-320 33-133 (199)
233 PRK14360 glmU bifunctional N-a 68.2 59 0.0013 35.2 12.1 93 212-314 30-125 (450)
234 PRK14355 glmU bifunctional N-a 67.7 59 0.0013 35.4 12.0 98 204-313 26-126 (459)
235 PLN03153 hypothetical protein; 67.6 24 0.00051 38.5 8.4 50 372-422 261-315 (537)
236 KOG3916|consensus 67.5 14 0.0003 37.8 6.2 68 91-188 152-228 (372)
237 PLN03193 beta-1,3-galactosyltr 67.0 1E+02 0.0022 32.8 12.7 169 232-425 179-354 (408)
238 PRK14353 glmU bifunctional N-a 66.9 42 0.00091 36.3 10.6 92 212-312 34-128 (446)
239 COG1212 KdsB CMP-2-keto-3-deox 66.3 60 0.0013 31.5 9.8 173 231-419 44-219 (247)
240 PF02434 Fringe: Fringe-like; 66.2 16 0.00034 36.4 6.5 110 283-420 86-203 (252)
241 cd02523 PC_cytidylyltransferas 65.6 43 0.00093 32.4 9.5 83 212-305 30-114 (229)
242 PRK02726 molybdopterin-guanine 65.3 64 0.0014 30.6 10.4 85 212-310 34-120 (200)
243 PF03360 Glyco_transf_43: Glyc 63.1 13 0.00028 35.7 5.0 70 231-303 11-97 (207)
244 PRK14356 glmU bifunctional N-a 62.8 2.3E+02 0.0049 30.7 17.3 87 212-309 34-124 (456)
245 PRK14352 glmU bifunctional N-a 62.5 91 0.002 34.2 12.3 94 212-314 33-130 (482)
246 cd04194 GT8_A4GalT_like A4GalT 61.7 1.1E+02 0.0025 29.9 11.8 102 202-306 3-117 (248)
247 cd00218 GlcAT-I Beta1,3-glucur 61.7 62 0.0013 31.4 9.2 88 90-186 1-106 (223)
248 PLN02458 transferase, transfer 60.0 56 0.0012 33.5 8.9 93 87-186 109-213 (346)
249 KOG1022|consensus 59.5 33 0.00071 37.2 7.5 107 198-317 443-553 (691)
250 TIGR00453 ispD 2-C-methyl-D-er 59.2 1.1E+02 0.0024 29.1 11.0 91 212-312 28-120 (217)
251 TIGR01173 glmU UDP-N-acetylglu 59.0 74 0.0016 34.4 10.8 90 212-312 29-120 (451)
252 PF05679 CHGN: Chondroitin N-a 58.9 62 0.0014 35.7 10.1 101 87-189 244-355 (499)
253 cd02516 CDP-ME_synthetase CDP- 58.5 94 0.002 29.6 10.4 93 212-313 29-126 (218)
254 PRK00155 ispD 2-C-methyl-D-ery 58.1 1.5E+02 0.0033 28.5 11.9 92 212-312 32-125 (227)
255 PLN02190 cellulose synthase-li 58.0 23 0.00049 40.5 6.4 55 196-250 91-148 (756)
256 PF01697 Glyco_transf_92: Glyc 57.8 63 0.0014 32.3 9.4 107 200-313 3-137 (285)
257 PRK14358 glmU bifunctional N-a 57.2 1.2E+02 0.0025 33.4 11.9 91 212-314 36-130 (481)
258 PRK14489 putative bifunctional 56.8 89 0.0019 33.0 10.5 50 269-318 78-128 (366)
259 PRK09382 ispDF bifunctional 2- 56.2 1.3E+02 0.0029 31.8 11.6 90 212-311 34-124 (378)
260 PRK15171 lipopolysaccharide 1, 56.1 1.9E+02 0.0041 30.1 12.6 107 198-307 24-143 (334)
261 PF13506 Glyco_transf_21: Glyc 55.9 14 0.0003 34.5 3.8 33 161-193 16-49 (175)
262 PF02348 CTP_transf_3: Cytidyl 55.9 97 0.0021 29.5 10.0 91 212-313 25-119 (217)
263 TIGR01208 rmlA_long glucose-1- 55.9 2.6E+02 0.0056 29.1 18.6 92 212-312 31-125 (353)
264 cd00899 b4GalT Beta-4-Galactos 55.6 54 0.0012 31.8 7.8 69 91-189 3-80 (219)
265 PF01501 Glyco_transf_8: Glyco 55.0 40 0.00087 32.7 7.2 94 211-307 11-121 (250)
266 TIGR01105 galF UTP-glucose-1-p 54.7 1.6E+02 0.0034 30.1 11.6 102 203-312 28-158 (297)
267 COG0746 MobA Molybdopterin-gua 54.7 73 0.0016 30.2 8.5 57 259-315 61-119 (192)
268 cd06430 GT8_like_2 GT8_like_2 53.7 2.4E+02 0.0052 28.9 12.5 104 201-309 4-121 (304)
269 PF03142 Chitin_synth_2: Chiti 53.3 20 0.00044 39.5 5.0 40 200-239 27-66 (527)
270 PLN02757 sirohydrochlorine fer 52.5 1.7E+02 0.0038 26.6 10.3 51 212-267 58-113 (154)
271 cd04198 eIF-2B_gamma_N The N-t 52.4 1.6E+02 0.0034 28.2 10.7 100 204-315 26-131 (214)
272 KOG1413|consensus 52.3 59 0.0013 33.6 7.6 49 87-136 64-112 (411)
273 PRK14357 glmU bifunctional N-a 51.5 2.1E+02 0.0046 30.8 12.8 97 203-314 22-120 (448)
274 KOG1476|consensus 50.9 1.2E+02 0.0025 31.0 9.4 79 89-175 86-172 (330)
275 TIGR01099 galU UTP-glucose-1-p 50.9 2.1E+02 0.0045 28.1 11.7 56 259-314 94-151 (260)
276 cd02524 G1P_cytidylyltransfera 48.4 2.3E+02 0.0051 27.7 11.6 45 268-313 101-146 (253)
277 COG1210 GalU UDP-glucose pyrop 48.2 48 0.001 33.1 6.2 60 258-317 97-158 (291)
278 PF09837 DUF2064: Uncharacteri 47.1 1.3E+02 0.0028 26.2 8.2 82 231-319 11-95 (122)
279 cd02541 UGPase_prokaryotic Pro 44.3 3.2E+02 0.007 26.9 17.7 55 259-313 94-150 (267)
280 PF11051 Mannosyl_trans3: Mann 44.1 1.4E+02 0.0031 29.9 9.3 96 201-299 3-106 (271)
281 cd04183 GT2_BcE_like GT2_BcbE_ 44.0 3E+02 0.0064 26.4 12.3 95 204-306 24-120 (231)
282 cd06432 GT8_HUGT1_C_like The C 43.8 3.3E+02 0.0072 26.9 12.3 92 212-307 14-118 (248)
283 TIGR00454 conserved hypothetic 43.5 2.8E+02 0.006 25.9 11.1 90 212-313 28-119 (183)
284 cd06431 GT8_LARGE_C LARGE cata 43.2 1.7E+02 0.0037 29.6 9.6 94 92-189 3-111 (280)
285 PLN03133 beta-1,3-galactosyltr 42.5 3.8E+02 0.0082 30.5 12.8 161 233-418 421-591 (636)
286 PF04748 Polysacc_deac_2: Dive 41.6 2.5E+02 0.0053 27.1 10.0 157 126-307 1-166 (213)
287 KOG2288|consensus 41.6 90 0.0019 30.8 6.8 119 277-421 102-220 (274)
288 PRK14354 glmU bifunctional N-a 41.3 3.4E+02 0.0073 29.3 12.4 89 212-312 31-122 (458)
289 PLN02728 2-C-methyl-D-erythrit 41.2 2.2E+02 0.0048 28.2 10.0 92 212-312 53-147 (252)
290 PF01697 Glyco_transf_92: Glyc 40.3 3.5E+02 0.0076 26.8 11.6 88 92-186 3-114 (285)
291 PRK14359 glmU bifunctional N-a 39.8 4.9E+02 0.011 27.7 17.8 87 205-305 26-115 (430)
292 PF05212 DUF707: Protein of un 39.4 4.2E+02 0.0092 26.8 11.6 138 281-429 114-253 (294)
293 KOG2733|consensus 38.5 2.8E+02 0.0061 29.1 10.0 99 197-310 31-131 (423)
294 PF03214 RGP: Reversibly glyco 38.2 28 0.00062 35.6 3.0 93 91-190 9-106 (348)
295 KOG1111|consensus 38.1 1.6E+02 0.0036 30.7 8.3 55 206-265 205-259 (426)
296 KOG3765|consensus 37.5 2.5E+02 0.0054 29.8 10.0 156 271-430 179-351 (386)
297 PLN02189 cellulose synthase 37.4 1.7E+02 0.0037 35.0 9.4 82 104-188 439-545 (1040)
298 PRK09451 glmU bifunctional N-a 37.0 2.6E+02 0.0055 30.3 10.6 89 212-311 34-124 (456)
299 PRK00576 molybdopterin-guanine 35.2 2.3E+02 0.0051 26.0 8.7 55 260-314 47-106 (178)
300 COG1211 IspD 4-diphosphocytidy 34.8 3.6E+02 0.0078 26.4 9.9 90 212-309 33-126 (230)
301 PRK10122 GalU regulator GalF; 33.6 5.2E+02 0.011 26.2 11.9 54 259-313 98-159 (297)
302 PF07598 DUF1561: Protein of u 32.1 82 0.0018 34.6 5.3 78 519-604 44-128 (632)
303 PLN02893 Cellulose synthase-li 32.1 94 0.002 35.8 6.1 86 162-250 68-156 (734)
304 TIGR01479 GMP_PMI mannose-1-ph 31.7 3.4E+02 0.0074 29.6 10.4 92 208-308 31-129 (468)
305 KOG0780|consensus 29.6 4.9E+02 0.011 27.7 10.2 41 214-257 201-241 (483)
306 PF07507 WavE: WavE lipopolysa 27.8 1.3E+02 0.0028 31.0 5.8 35 274-308 86-120 (311)
307 PRK14490 putative bifunctional 27.8 3.5E+02 0.0076 28.4 9.4 82 212-308 201-284 (369)
308 PF01128 IspD: 2-C-methyl-D-er 27.3 5.7E+02 0.012 24.8 10.0 89 212-311 29-120 (221)
309 COG1207 GlmU N-acetylglucosami 26.6 6.1E+02 0.013 27.3 10.4 92 212-313 31-126 (460)
310 PF02485 Branch: Core-2/I-Bran 25.6 4.6E+02 0.0099 25.4 9.4 103 202-311 3-115 (244)
311 PF11397 GlcNAc: Glycosyltrans 25.6 3.5E+02 0.0076 28.2 8.7 44 150-193 88-134 (343)
312 cd02509 GDP-M1P_Guanylyltransf 24.8 3.9E+02 0.0085 26.7 8.8 85 95-187 26-114 (274)
313 KOG2287|consensus 24.4 8.3E+02 0.018 25.5 15.2 151 245-420 144-302 (349)
314 KOG2791|consensus 24.3 6E+02 0.013 26.3 9.5 118 284-428 253-375 (455)
315 cd00505 Glyco_transf_8 Members 23.5 6.2E+02 0.014 24.6 9.9 86 100-189 11-109 (246)
316 COG0075 Serine-pyruvate aminot 23.0 3.1E+02 0.0068 29.1 7.8 68 196-271 128-195 (383)
317 PF03028 Dynein_heavy: Dynein 22.7 2.3E+02 0.005 32.8 7.5 85 218-310 106-195 (707)
318 PF09886 DUF2113: Uncharacteri 22.5 2.6E+02 0.0055 26.4 6.2 49 247-310 136-184 (188)
319 PF01501 Glyco_transf_8: Glyco 22.3 2.3E+02 0.0049 27.2 6.4 84 104-188 12-111 (250)
320 KOG2264|consensus 22.2 96 0.0021 33.9 3.7 108 199-317 650-758 (907)
321 PF04123 DUF373: Domain of unk 21.5 1.1E+02 0.0023 31.9 3.9 38 104-144 84-121 (344)
322 PF09807 DUF2348: Uncharacteri 21.4 7.3E+02 0.016 24.5 9.7 128 110-241 5-146 (249)
323 TIGR02091 glgC glucose-1-phosp 21.3 5E+02 0.011 26.9 9.2 43 269-312 93-138 (361)
324 TIGR03552 F420_cofC 2-phospho- 20.6 6E+02 0.013 23.5 8.8 70 104-187 31-102 (195)
325 PF01793 Glyco_transf_15: Glyc 20.3 3E+02 0.0066 28.5 6.8 57 196-252 53-109 (328)
326 PLN03180 reversibly glycosylat 20.3 2E+02 0.0044 29.7 5.4 29 164-192 82-110 (346)
No 1
>KOG3736|consensus
Probab=100.00 E-value=4.4e-92 Score=745.07 Aligned_cols=436 Identities=49% Similarity=0.917 Sum_probs=393.5
Q ss_pred chHHHhHhhccccceeeccccCCCCCCCCCCcccccccCCCCCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceE
Q psy10463 46 SDAQQLYQINRFNLLVSDRIPVNRTLPDVRKPKCKTKVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEI 125 (605)
Q Consensus 46 ~~~~~~~~~~~~n~~~~~~~~~~r~~~~~r~~~~~~~~~~~~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~Ei 125 (605)
...+.+|++++||+++||+|+++|++||+|++.|+...+..+.+|.+||||++|||+|+.|.++|.||++++++
T Consensus 98 ~~~~~~~~~~~~N~~~Sd~I~l~Rsl~D~r~~~C~~~~~~~~~Lp~~Svii~f~nE~~s~llRtv~Svi~rtp~------ 171 (578)
T KOG3736|consen 98 DLEDEGYEKNAFNALLSDRISLNRSLPDLRHPECKKLKYYSDKLPTTSVIIIFHNEAWSTLLRTVHSVINRTPP------ 171 (578)
T ss_pred HHHHHHhhcccchhhhhhcccccCCCcchhchhhhhccccccccCCCceEEEEecCCCcchhheEEeehccCCh------
Confidence 35677799999999999999999999999999998745443779999999999999977766666666666544
Q ss_pred EEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhhhccCceEEEecCccccccccccccCCcceEEEE
Q psy10463 126 LLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLVFNEEFLPKSSIVIV 205 (605)
Q Consensus 126 ivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~~a~g~~i~~lD~d~~~~~~~~~~~~p~vSVIIp 205 (605)
T Consensus 172 -------------------------------------------------------------------------------- 171 (578)
T KOG3736|consen 172 -------------------------------------------------------------------------------- 171 (578)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhccCC
Q psy10463 206 FHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGE 285 (605)
Q Consensus 206 ~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~gd 285 (605)
.++.|||+|||+|+.+.+...++++.+.+. .+++++++++.|+++||+.|++.|+||
T Consensus 172 ----------------------~lLkEIiLVdD~S~~~~l~~~Ld~y~k~~~-~v~i~r~~~R~GLIrARl~GA~~A~ge 228 (578)
T KOG3736|consen 172 ----------------------YLLKEIILVDDFSDRDHLKDKLEEYVKRFS-KVRILRTKKREGLIRARLLGASMATGE 228 (578)
T ss_pred ----------------------hHeEEEEEeecCcchhhhhhhhHHHHhhhc-ceeEEeecchhhhHHHHhhhhhhhhch
Confidence 444688888888877776767888999888 599999999999999999999999999
Q ss_pred EEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhhhccCCC
Q psy10463 286 ILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFT 365 (605)
Q Consensus 286 ~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~ 365 (605)
+++|||+||+++.+||++|++++.+++..+|+|+||.|+.++|.|.......+|+|+|.+.|+|..+|...... ...++
T Consensus 229 VL~FLDsHcE~n~gWLePLL~~I~~~r~tvv~PvID~Id~~tf~y~~~~~~~rGgFdW~l~f~w~~lP~~~~~~-~~~~t 307 (578)
T KOG3736|consen 229 VLTFLDSHCEVNVGWLEPLLARIAEDRKTVVCPVIDVIDDNTFEYEKQSELMRGGFDWELTFKWERLPLPEEKR-RELPT 307 (578)
T ss_pred heeeeecceeEecCcchHHHHHhhhcCceeecceEEeecCcCceecccCccceeeeecceeEEeccCCccHhhc-ccCCC
Confidence 99999999999999999999999999999999999999999999999777779999999999999999887766 45568
Q ss_pred CccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcccCCCCCCCCCcchhhh
Q psy10463 366 EPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRKASPYSFPGGVSEVLY 445 (605)
Q Consensus 366 ~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r~~~~~~~~~~~~~~~~ 445 (605)
.|+++|+|+||+|+|+|++|.++|+||++|.+||+|++||+||+|+||++++++|||+|+|++|...||++|++. +++.
T Consensus 308 ~PirsPtMaGglFAI~r~yF~eiG~yD~gMdiwGGENlElSfrvWqCGG~lei~PCSrVGHifRk~~pY~~p~~~-~~~~ 386 (578)
T KOG3736|consen 308 DPIRSPTMAGGLFAIDRKYFGELGSYDEGMDIWGGENLELSFRVWQCGGRLEIVPCSRVGHIFRKRKPYTFPDGT-DTAT 386 (578)
T ss_pred CCcCCcccCCceEEeeHHHHhhccCccccccccChhhceeeEEEeccCCeEEecCccceeeeeecCCCccCCCcc-hhhh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998776 8899
Q ss_pred hhHHHHHHHHhhhhHhhhhccCchhhccCCccchHHHHHHhhhcCCcccccccccccCCCcCCCCC-ccccccccccccc
Q psy10463 446 GNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLELRKQLKCHSFKWYLTHVWPHHFLPMDD-KFFGRIRHVQTHK 524 (605)
Q Consensus 446 rn~~r~a~~W~d~~k~~~~~~~p~~~~~~~~g~~~~r~~lr~~l~ck~f~wyl~~v~p~~~~p~~~-~~~G~ir~~~~~~ 524 (605)
+|.+|+||+|||+||++||.++| ....+++||+++|++||++|+||+|+|||+||||+++.|... .++|+|+|..++.
T Consensus 387 ~N~~RlAeVWmDeyK~~~y~~~P-~~~~~d~GDvseR~~LR~~L~CKsFkWyL~nVyPel~~~~~~~~~~G~i~~~~~~~ 465 (578)
T KOG3736|consen 387 RNLKRLAEVWMDEYKEQFYKRMP-GLRNIDEGDLTERKALRERLNCKSFKWYLENVYPELYLPTPHVYASGEIRNGNPNL 465 (578)
T ss_pred hchhhhhhhhhHHHHHHHHhhCc-cccccCCCCchhHHHHHHhcCCccccchHhhcCccccCCCCcccccceeccCCcch
Confidence 99999999999999999999999 666699999999999999999999999999999999999765 7889999988999
Q ss_pred cccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeecCCCeeeecCCCCCCCCCceEEEeCCCCCCcceEeCC
Q psy10463 525 CVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIATDESVCLDVPEYENDISPRVRILACSGFNRQRWTYDK 604 (605)
Q Consensus 525 CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~~~~~CLd~~~~~~~~g~~v~l~~C~~~~~Q~W~~~~ 604 (605)
|+|...... ..|.++++++| |++++||.|.|| +.++|+.+. .||++.. .|. |+|.+|+..++|.|.|+.
T Consensus 466 cld~~~~~~---~~~~~~~~~~C-h~~~~~Q~~~yT-~~~eir~~~-~cl~~~~----~~~-v~l~~C~~~~~q~w~~~~ 534 (578)
T KOG3736|consen 466 CLDTERAPA---GQGMAVGLYPC-HGPGGNQYFPYT-KQGEIRIGD-LCLDVDD----AGK-VTLYDCHKMGNQLWHYDK 534 (578)
T ss_pred hhhhhchhc---cCCCcceEecC-CCcccccccccc-CCcceEECC-EEecccc----CCc-eEEEecccccccceEEcC
Confidence 999976544 23689999999 899999999999 999999987 9999862 133 999999887799999875
No 2
>KOG3738|consensus
Probab=100.00 E-value=3.8e-91 Score=681.75 Aligned_cols=432 Identities=42% Similarity=0.787 Sum_probs=383.8
Q ss_pred cchHHHhHhhccccceeeccccCCCCCCCCCCcccccccCCCCCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcce
Q psy10463 45 LSDAQQLYQINRFNLLVSDRIPVNRTLPDVRKPKCKTKVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKE 124 (605)
Q Consensus 45 ~~~~~~~~~~~~~n~~~~~~~~~~r~~~~~r~~~~~~~~~~~~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~E 124 (605)
....+..|+.|.||+..||.+...|.+||+|++.|....|. .++|.+||||.+|||+.+.|.+||.||++++|++++.|
T Consensus 80 ~~~Ged~y~~~~fnq~esd~l~~~r~i~dtRh~qC~~~~y~-~dlp~TsviITfHNEARS~LLRTv~SvlnrsP~~li~E 158 (559)
T KOG3738|consen 80 WHQGEDPYKANSFNQEESDKLNPTRKIPDTRHPQCRDVDYK-VDLPPTSVIITFHNEARSTLLRTVVSVLNRSPEHLIHE 158 (559)
T ss_pred ccCCCchhhcCccchhhhhhhCCCCccccccccccccceee-cCCCCceEEEEeccHHHHHHHHHHHHHHcCChHHhhhe
Confidence 44677899999999999999999999999999999999998 99999999999999997778777777777777666555
Q ss_pred EEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhhhccCceEEEecCccccccccccccCCcceEEE
Q psy10463 125 ILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLVFNEEFLPKSSIVI 204 (605)
Q Consensus 125 iivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~~a~g~~i~~lD~d~~~~~~~~~~~~p~vSVII 204 (605)
||+|||+|.|.+
T Consensus 159 iILVDD~S~Dpe-------------------------------------------------------------------- 170 (559)
T KOG3738|consen 159 IILVDDFSQDPE-------------------------------------------------------------------- 170 (559)
T ss_pred eEEecCCCCChH--------------------------------------------------------------------
Confidence 555555555542
Q ss_pred EeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhccC
Q psy10463 205 VFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEG 284 (605)
Q Consensus 205 p~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~g 284 (605)
.-. ...+.+ +++++++.++.|+.+.|+.|+..|.|
T Consensus 171 ----------------------------------------d~~----~L~ri~-kvr~LRN~~ReGLirSRvrGAdvA~a 205 (559)
T KOG3738|consen 171 ----------------------------------------DGK----LLKRIP-KVRVLRNNEREGLIRSRVRGADVAQA 205 (559)
T ss_pred ----------------------------------------HHH----HHhhhh-eeeeecccchhhhhhhhccccccccc
Confidence 221 123344 89999999999999999999999999
Q ss_pred CEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhhhccCC
Q psy10463 285 EILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDF 364 (605)
Q Consensus 285 d~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~ 364 (605)
.++.|||+||+++.+||++|+++++++...+|+|+||+|+.++|.|.++.....|||+|.++|+|.......... +.++
T Consensus 206 ~vltFLDSHcEvN~~WLePLL~Rvaed~trvVsPiiDvIn~dnf~Y~~asadLrGGFDWsLhF~We~~~~eqr~s-r~~P 284 (559)
T KOG3738|consen 206 TVLTFLDSHCEVNEGWLEPLLERVAEDTTRVVSPIIDVINLDNFSYVGASADLRGGFDWSLHFKWEQMQLEQRES-RADP 284 (559)
T ss_pred eEEEEEecceeecchhhHHHHHHHhhcccceeecccccccccccccccchhhhcCCcceEEEEEehhcCHHHHhh-ccCC
Confidence 999999999999999999999999999999999999999999999999988889999999999999988776655 4889
Q ss_pred CCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcccCCCCCCCCCcchhh
Q psy10463 365 TEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRKASPYSFPGGVSEVL 444 (605)
Q Consensus 365 ~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r~~~~~~~~~~~~~~~ 444 (605)
+.|+++|+++||+|+|+|++|.++|.||..|.+||||++|+++|+|+||+.++++|||+|+|+||+.+||+||++...++
T Consensus 285 t~PirtP~iAGGlfvidk~wF~~LGkyd~~mdiWGGEn~ElsfrvW~CGGslEIvPCSRVGHVFRkrHpy~FP~gs~~ty 364 (559)
T KOG3738|consen 285 TAPIRTPAIAGGLFVIDKEWFNELGKYDMDMDIWGGENLELSFRVWQCGGSLEIVPCSRVGHVFRKRHPYTFPGGSGNTY 364 (559)
T ss_pred CCcccCccccceeEEecHHHHHHhcccCccccccCCcceEEEEEEEeeCCeeEEEeccchhhhhhccCCCcCCCCCCcch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHhhhhHhhhhccCchhhccCCccchHHHHHHhhhcCCcccccccccccCCCcCCCCC-cccccccccccc
Q psy10463 445 YGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLELRKQLKCHSFKWYLTHVWPHHFLPMDD-KFFGRIRHVQTH 523 (605)
Q Consensus 445 ~rn~~r~a~~W~d~~k~~~~~~~p~~~~~~~~g~~~~r~~lr~~l~ck~f~wyl~~v~p~~~~p~~~-~~~G~ir~~~~~ 523 (605)
.+|.+|.||+||||||.|||...| ..+.+.+|++..|.++|++++||||+|||+|||||+.+|... .+.|.||+ ..
T Consensus 365 ~~NTkr~AEvWmDEYK~~yyaarP-sAr~vpfg~i~~rL~~Rk~l~CksFkWYLenVyPeL~ip~~~~~~~g~lrq--g~ 441 (559)
T KOG3738|consen 365 IKNTKRAAEVWMDEYKNYYYAARP-SARRVPFGNIYDRLELRKKLRCKSFKWYLENVYPELRIPFKELIATGTLRQ--GD 441 (559)
T ss_pred hhcchHHHHHHHHHHHHHHHhcCc-hhhcCCCccHHHHHHHHhhcCCcchhhhhhhcCcceeccccccccccchhc--cc
Confidence 999999999999999999999999 788999999999999999999999999999999999999754 57899997 68
Q ss_pred ccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeecCCCeeeecCCCCCCCCCceEEEeCCCCC-CcceEe
Q psy10463 524 KCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIATDESVCLDVPEYENDISPRVRILACSGFN-RQRWTY 602 (605)
Q Consensus 524 ~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~~~~~CLd~~~~~~~~g~~v~l~~C~~~~-~Q~W~~ 602 (605)
.|||+.+... ...++|+.| |+.++||+|.+....+++..+..+||++.... .|++|.|..|.... .|+|.-
T Consensus 442 ~Cl~s~~~~~-----~~~~gl~~C-~~s~~nqqwa~~~t~~~~~~~~elCL~v~~~~--pg~~v~l~~C~~~e~~q~~v~ 513 (559)
T KOG3738|consen 442 NCLDSQGQNS-----QEALGLASC-HGSGGNQQWAFLRTSTQLITHRELCLAVGSNT--PGSPVALVPCGNNETKQRWVE 513 (559)
T ss_pred hhhhhhhccc-----ccCcceeec-ccCCCCcchhhhhhhhhHHHHHhhhheeecCC--CCCeEEEEecCCCCCceEEEe
Confidence 9999987654 236789999 88889999998322233333345999997643 48899999998877 899963
No 3
>KOG3737|consensus
Probab=100.00 E-value=3.7e-82 Score=616.93 Aligned_cols=432 Identities=39% Similarity=0.737 Sum_probs=387.5
Q ss_pred HHHhHhhccccceeeccccCCCCCCCCCCcccccccCCCCCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEE
Q psy10463 48 AQQLYQINRFNLLVSDRIPVNRTLPDVRKPKCKTKVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILL 127 (605)
Q Consensus 48 ~~~~~~~~~~n~~~~~~~~~~r~~~~~r~~~~~~~~~~~~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~Eiiv 127 (605)
.+..-++.+||.++||.|+.+|.++|+|.++|+.-.|+ ..+|++||||.+|||.|+.|.+|++||+.++++.
T Consensus 114 ~~AsekEfGfN~~~SDmISm~R~v~D~R~EECkhWdYp-e~Lpt~SVviVFHNEGws~LmRTVHSVi~RsP~~------- 185 (603)
T KOG3737|consen 114 IQASEKEFGFNMVASDMISMDRNVNDLRQEECKHWDYP-ENLPTSSVVIVFHNEGWSTLMRTVHSVIKRSPRK------- 185 (603)
T ss_pred HHHHHHhhCcceeehhhhhcccCccccCHhhccccCCc-ccCCcceEEEEEecCccHHHHHHHHHHHhcCcHH-------
Confidence 35667899999999999999999999999999999999 9999999999999999888888877777776544
Q ss_pred EeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhhhccCceEEEecCccccccccccccCCcceEEEEee
Q psy10463 128 VDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLVFNEEFLPKSSIVIVFH 207 (605)
Q Consensus 128 vdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~~a~g~~i~~lD~d~~~~~~~~~~~~p~vSVIIp~~ 207 (605)
T Consensus 186 -------------------------------------------------------------------------------- 185 (603)
T KOG3737|consen 186 -------------------------------------------------------------------------------- 185 (603)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhccCCEE
Q psy10463 208 NEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEIL 287 (605)
Q Consensus 208 n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~gd~i 287 (605)
.+.|||+|||.|+.+.+++.|++|+..+.+.|++++++++.|++.||..|+++|+|++|
T Consensus 186 ---------------------~l~eivlvDDfSdKehLkekLDeYv~~fnGlVkV~Rne~REGLI~aRSiGA~~atGeV~ 244 (603)
T KOG3737|consen 186 ---------------------YLAEIVLVDDFSDKEHLKEKLDEYVKLFNGLVKVFRNERREGLIQARSIGAQKATGEVL 244 (603)
T ss_pred ---------------------hhheEEEeccCCccHHHHHHHHHHHHHhcCEEEEEecchhhhhhhhhccchhhccccEE
Confidence 23588888888888888888999999998899999999999999999999999999999
Q ss_pred EEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEeccc----ccceeeeeccceeeEeecCchhHhhhccC
Q psy10463 288 VFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSF----ELHWGAFNWELHFRWYTYGSSDAIIKRKD 363 (605)
Q Consensus 288 ~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~----~~~~g~~~~~l~~~~~~~~~~~~~~~~~~ 363 (605)
+|||+||++..+||.+|++.+..+......|+||.||.++++|...+ +-.+|.|.|.+-++-.++..++... +.+
T Consensus 245 ifLDAHCEVntNWlpPLlAPI~rdRtvmTVP~IDgId~n~~EyrpvyG~dn~h~rGifeWgmLyKe~~~t~rE~r~-Rkh 323 (603)
T KOG3737|consen 245 IFLDAHCEVNTNWLPPLLAPISRDRTVMTVPLIDGIDGNTYEYRPVYGGDNDHARGIFEWGMLYKEVPLTPREKRL-RKH 323 (603)
T ss_pred EEEecceeeecccccccccccccCceEEEEeeeeeecCCceEEeeccCCcchhhcchhhhhheeccCCCCHHHHHh-hhc
Confidence 99999999999999999999999999999999999999999987643 2448999999999988888877655 667
Q ss_pred CCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcccCCCCCCCCC----
Q psy10463 364 FTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRKASPYSFPGG---- 439 (605)
Q Consensus 364 ~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r~~~~~~~~~~---- 439 (605)
.+.|+++|+++||+|+|.|++|.++|.||+++.+||+|++||++++|+||++|+++|||+|+|+||..-||.+.+-
T Consensus 324 nsePyRSPthAGGLfAInRe~F~ELG~YDpgLqiWGGEnfElSfKIWQCGG~i~fVPCSrVGHvYR~~mpy~fgk~~~k~ 403 (603)
T KOG3737|consen 324 NSEPYRSPTHAGGLFAINREFFFELGLYDPGLQIWGGENFELSFKIWQCGGKILFVPCSRVGHVYRSLMPYQFGKPPIKV 403 (603)
T ss_pred cCCCCCCcccccceeeehHHHHHHhccCCCcceeecCcceeEEEEEEeeCCEEEEEEccccchhhhccccccCCCCcccc
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999988332
Q ss_pred cchhhhhhHHHHHHHHhhhhHhhhhccCchhhccCCccchHHHHHHhhhcCCcccccccccccCCC--cCC--CCCcccc
Q psy10463 440 VSEVLYGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLELRKQLKCHSFKWYLTHVWPHH--FLP--MDDKFFG 515 (605)
Q Consensus 440 ~~~~~~rn~~r~a~~W~d~~k~~~~~~~p~~~~~~~~g~~~~r~~lr~~l~ck~f~wyl~~v~p~~--~~p--~~~~~~G 515 (605)
.+..+..|+.|+.+.|+|+||+|||.+.| ....+++||||++++||++|+||||+|||++|.-+. .+| +.+.-||
T Consensus 404 ~~p~i~iNy~RVvetW~Ddyk~YfytreP-~a~~l~~GDISeqlalr~~lnCkSFkWfMe~iAYDv~~~yP~lP~N~~WG 482 (603)
T KOG3737|consen 404 GSPPILINYVRVVETWWDDYKDYFYTREP-EAQALPYGDISEQLALREDLNCKSFKWFMEEIAYDVTSHYPLLPKNVDWG 482 (603)
T ss_pred CCCceEeehhhHHHHHHHhhhhheeecCh-hhccCCcccHHHHHHhHhhcCCchhHHHHHHHHHHHHhcCCCCCCCCcch
Confidence 13468899999999999999999999999 667899999999999999999999999999986553 222 3345799
Q ss_pred ccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeecCCCeeeecCCCCCCCCCceEEEeCCCC
Q psy10463 516 RIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIATDESVCLDVPEYENDISPRVRILACSGF 595 (605)
Q Consensus 516 ~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~~~~~CLd~~~~~~~~g~~v~l~~C~~~ 595 (605)
+||+.+++.|||.++. ++|+.+++-+| |++++||+++++ ..|++.... .||+++ |.++.+..|.-+
T Consensus 483 E~R~~at~~ClDsMG~-----~p~g~mglt~C-Hg~GgNQL~RlN-~agQl~qge-~CltAd------g~~i~~~hC~lg 548 (603)
T KOG3737|consen 483 EIRGFATAYCLDSMGK-----TPGGFMGLTPC-HGMGGNQLFRLN-EAGQLMQGE-QCLTAD------GSKIMITHCNLG 548 (603)
T ss_pred hccCcccchhHHhcCC-----CCCCccccccc-cCCCCceEEEec-cccchhccc-eeeecC------CceEEEEEeecc
Confidence 9999999999999986 45899999999 999999999999 999998876 999865 468999999877
Q ss_pred C-CcceEeCC
Q psy10463 596 N-RQRWTYDK 604 (605)
Q Consensus 596 ~-~Q~W~~~~ 604 (605)
. +-.|+|++
T Consensus 549 tv~g~WqY~~ 558 (603)
T KOG3737|consen 549 TVKGEWQYFK 558 (603)
T ss_pred cccCceehhh
Confidence 7 77898865
No 4
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=100.00 E-value=9e-50 Score=410.01 Aligned_cols=298 Identities=54% Similarity=1.021 Sum_probs=256.7
Q ss_pred eEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHh
Q psy10463 201 SIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGAR 280 (605)
Q Consensus 201 SVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~ 280 (605)
|||||+||+..+.|.+||+|+++++++...+|||||||||+|++.....+.+......++++++++.|.|+++|+|.|++
T Consensus 1 SIIIp~~N~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~~~~~~~~v~vi~~~~n~G~~~a~N~g~~ 80 (299)
T cd02510 1 SVIIIFHNEALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEYYKKYLPKVKVLRLKKREGLIRARIAGAR 80 (299)
T ss_pred CEEEEEecCcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHHHhhcCCcEEEEEcCCCCCHHHHHHHHHH
Confidence 79999999986799999999999998765579999999999997664433233333338999999999999999999999
Q ss_pred hccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhhh
Q psy10463 281 QAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIK 360 (605)
Q Consensus 281 ~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~ 360 (605)
+|+||||+|||+|+++.|+||++|++.+.+++..+++|.+..++...+.+........+++.|.+.+.|........ .
T Consensus 81 ~A~gd~i~fLD~D~~~~~~wL~~ll~~l~~~~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 158 (299)
T cd02510 81 AATGDVLVFLDSHCEVNVGWLEPLLARIAENRKTVVCPIIDVIDADTFEYRGSSGDARGGFDWSLHFKWLPLPEEER--R 158 (299)
T ss_pred HccCCEEEEEeCCcccCccHHHHHHHHHHhCCCeEEEeeeccccCCCeeEecCCCceeEEecccceeccccCCHHHh--h
Confidence 99999999999999999999999999999999999999998888888877665543477888888777765544432 1
Q ss_pred ccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcc-cCCCCCCCCC
Q psy10463 361 RKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFR-KASPYSFPGG 439 (605)
Q Consensus 361 ~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r-~~~~~~~~~~ 439 (605)
......+.+++.++|+||+++|++|+++|||||.|..|++||+|||+|++++|+++.++|++.|.|.++ .+.++..+..
T Consensus 159 ~~~~~~~~~~~~~~g~~~~irr~~~~~vGgfDe~~~~~~~ED~Dl~~R~~~~G~~i~~~p~a~v~H~~~~~~~~~~~~~~ 238 (299)
T cd02510 159 RESPTAPIRSPTMAGGLFAIDREWFLELGGYDEGMDIWGGENLELSFKVWQCGGSIEIVPCSRVGHIFRRKRKPYTFPGG 238 (299)
T ss_pred hcCCCCCccCccccceeeEEEHHHHHHhCCCCCcccccCchhHHHHHHHHHcCCeEEEeeccEEEEeccccCCCCCCCCc
Confidence 233445677889999999999999999999999999988999999999999999999999999999999 7888876554
Q ss_pred cchhhhhhHHHHHHHHhhhhHhhhhccCchhhccCCccchHHHHHHhhhcCCccccccccccc
Q psy10463 440 VSEVLYGNLARVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLELRKQLKCHSFKWYLTHVW 502 (605)
Q Consensus 440 ~~~~~~rn~~r~a~~W~d~~k~~~~~~~p~~~~~~~~g~~~~r~~lr~~l~ck~f~wyl~~v~ 502 (605)
.. .+.+|..|++++|+++++.+++..+| ....+..|++.+|+++++++.||+|+||++.+.
T Consensus 239 ~~-~~~~n~~r~~~~w~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 299 (299)
T cd02510 239 SG-TVLRNYKRVAEVWMDEYKEYFYKARP-ELRNIDYGDLSERKALRERLKCKSFKWYLENVY 299 (299)
T ss_pred cc-HHHHHHHHHHHHHHHHHHHHHHhcCc-ccccCCCCCHHHHHHHHHHcCCCCchHHHhhcC
Confidence 32 67899999999999999999999999 445589999999999999999999999998763
No 5
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.95 E-value=3.5e-27 Score=227.61 Aligned_cols=198 Identities=22% Similarity=0.241 Sum_probs=152.0
Q ss_pred CcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHH
Q psy10463 198 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLL 277 (605)
Q Consensus 198 p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~ 277 (605)
|++|||||+||+..+.+.+||+|+++|+++. +|||||||||+|+++...++.+..+.+ ++++++.+.+.|++.|+|.
T Consensus 1 p~vsiii~~~n~~~~~l~~~l~sl~~q~~~~--~eiivvd~gs~d~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~a~n~ 77 (202)
T cd04184 1 PLISIVMPVYNTPEKYLREAIESVRAQTYPN--WELCIADDASTDPEVKRVLKKYAAQDP-RIKVVFREENGGISAATNS 77 (202)
T ss_pred CeEEEEEecccCcHHHHHHHHHHHHhCcCCC--eEEEEEeCCCCChHHHHHHHHHHhcCC-CEEEEEcccCCCHHHHHHH
Confidence 6799999999998778999999999999876 799999999999877777777777666 8999999999999999999
Q ss_pred HHhhccCCEEEEecCCcccCcChHHHHHHHHHc-CCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchh
Q psy10463 278 GARQAEGEILVFLDAHCECTLGWLENLVARVAE-DRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSD 356 (605)
Q Consensus 278 G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~-~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~ 356 (605)
|++.|+|+|++|+|+|+.+.|+||+.+++.+.. ....++.+.....+.....+.. ....+...
T Consensus 78 g~~~a~~d~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----------------~~~~~~~~ 141 (202)
T cd04184 78 ALELATGEFVALLDHDDELAPHALYEVVKALNEHPDADLIYSDEDKIDEGGKRSEP----------------FFKPDWSP 141 (202)
T ss_pred HHHhhcCCEEEEECCCCcCChHHHHHHHHHHHhCCCCCEEEccHHhccCCCCEecc----------------ccCCCCCH
Confidence 999999999999999999999999999999944 4444443322111111000000 00000000
Q ss_pred HhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEE
Q psy10463 357 AIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVA 425 (605)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~ 425 (605)
.. .......+++++++|+.|+++||||+.+. ++||+||++|++++|+++.++|.+.+.
T Consensus 142 -~~--------~~~~~~~~~~~~~~r~~~~~iggf~~~~~--~~eD~~l~~rl~~~g~~~~~~~~~~~~ 199 (202)
T cd04184 142 -DL--------LLSQNYIGHLLVYRRSLVRQVGGFREGFE--GAQDYDLVLRVSEHTDRIAHIPRVLYH 199 (202)
T ss_pred -HH--------hhhcCCccceEeEEHHHHHHhCCCCcCcc--cchhHHHHHHHHhccceEEEccHhhhh
Confidence 00 01113445677899999999999999876 589999999999999999999986543
No 6
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=99.95 E-value=1.1e-26 Score=223.62 Aligned_cols=174 Identities=20% Similarity=0.292 Sum_probs=145.2
Q ss_pred CcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCC-CCEEEEeCCCCCCh---HH
Q psy10463 198 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLS-VPTRVIRSPGRVGL---IK 273 (605)
Q Consensus 198 p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~-~~v~~i~~~~n~G~---~~ 273 (605)
|.||||||+||++ ..|.++|+|+++|+++. +|||||||+|+|++. +.++++.+.++ .+++++....+.|. +.
T Consensus 1 p~vsviip~~n~~-~~l~~~L~sl~~q~~~~--~eiivVdd~s~d~t~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 76 (196)
T cd02520 1 PGVSILKPLCGVD-PNLYENLESFFQQDYPK--YEILFCVQDEDDPAI-PVVRKLIAKYPNVDARLLIGGEKVGINPKVN 76 (196)
T ss_pred CCeEEEEecCCCC-ccHHHHHHHHHhccCCC--eEEEEEeCCCcchHH-HHHHHHHHHCCCCcEEEEecCCcCCCCHhHH
Confidence 6799999999999 89999999999999877 799999999999854 47888877776 24677877766664 34
Q ss_pred HHHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecC
Q psy10463 274 ARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYG 353 (605)
Q Consensus 274 arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~ 353 (605)
++|.|++.|+|||++|+|+|+.++|+||+.+++.+..+..+++++.
T Consensus 77 ~~n~g~~~a~~d~i~~~D~D~~~~~~~l~~l~~~~~~~~~~~v~~~---------------------------------- 122 (196)
T cd02520 77 NLIKGYEEARYDILVISDSDISVPPDYLRRMVAPLMDPGVGLVTCL---------------------------------- 122 (196)
T ss_pred HHHHHHHhCCCCEEEEECCCceEChhHHHHHHHHhhCCCCCeEEee----------------------------------
Confidence 6789999999999999999999999999999999865545554421
Q ss_pred chhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEc
Q psy10463 354 SSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLF 428 (605)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~ 428 (605)
...|++++++|++|+++|||++.... .+||+||++|+.+.|+++.+.|.+.++|..
T Consensus 123 ------------------~~~g~~~~~r~~~~~~~ggf~~~~~~-~~eD~~l~~rl~~~G~~i~~~~~~~~~~~~ 178 (196)
T cd02520 123 ------------------CAFGKSMALRREVLDAIGGFEAFADY-LAEDYFLGKLIWRLGYRVVLSPYVVMQPLG 178 (196)
T ss_pred ------------------cccCceeeeEHHHHHhccChHHHhHH-HHHHHHHHHHHHHcCCeEEEcchheeccCC
Confidence 24567899999999999999763333 479999999999999999999998766544
No 7
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=99.94 E-value=2.1e-26 Score=236.87 Aligned_cols=219 Identities=21% Similarity=0.292 Sum_probs=165.6
Q ss_pred CCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHH-CCCCEEEEeCCCCCChHHHH
Q psy10463 197 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAK-LSVPTRVIRSPGRVGLIKAR 275 (605)
Q Consensus 197 ~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~-~~~~v~~i~~~~n~G~~~ar 275 (605)
+|.+++||++||+. +.+.+||.++.+|+++. .++++|||+|+|++.+ ..... .+ +++++.+.+|.|+++|.
T Consensus 2 ~~~i~~iiv~yn~~-~~l~~~l~~l~~~~~~~--~~iv~vDn~s~d~~~~----~~~~~~~~-~v~~i~~~~NlG~agg~ 73 (305)
T COG1216 2 MPKISIIIVTYNRG-EDLVECLASLAAQTYPD--DVIVVVDNGSTDGSLE----ALKARFFP-NVRLIENGENLGFAGGF 73 (305)
T ss_pred CcceEEEEEecCCH-HHHHHHHHHHhcCCCCC--cEEEEccCCCCCCCHH----HHHhhcCC-cEEEEEcCCCccchhhh
Confidence 68999999999999 99999999999999887 5777899999998543 22333 45 99999999999999999
Q ss_pred HHHHhhccCC---EEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCCeeEEecccccceeeeeccceeeEee
Q psy10463 276 LLGARQAEGE---ILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYT 351 (605)
Q Consensus 276 N~G~~~A~gd---~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~ 351 (605)
|.|++.|.++ |+++||+|+.+.+++|+.|++.+++.+. .+++|.+...+........+ .....+...+..
T Consensus 74 n~g~~~a~~~~~~~~l~LN~D~~~~~~~l~~ll~~~~~~~~~~~~~~~i~~~~~~~~~~~~~------~~~~~~~~~~~~ 147 (305)
T COG1216 74 NRGIKYALAKGDDYVLLLNPDTVVEPDLLEELLKAAEEDPAAGVVGPLIRNYDESLYIDRRG------GESDGLTGGWRA 147 (305)
T ss_pred hHHHHHHhcCCCcEEEEEcCCeeeChhHHHHHHHHHHhCCCCeEeeeeEecCCCCcchheec------ccccccccccee
Confidence 9999999665 9999999999999999999999999866 66667765444332221111 011111111111
Q ss_pred cCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcccC
Q psy10463 352 YGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRKA 431 (605)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r~~ 431 (605)
.+...... .........+.+.|++|+|+|++|+++|+|||.+++| +||+|+|+|+++.|+++.++|.+.+.|....+
T Consensus 148 ~~~~~~~~--~~~~~~~~~~~~~G~~~li~~~~~~~vG~~de~~F~y-~eD~D~~~R~~~~G~~i~~~p~a~i~H~~g~s 224 (305)
T COG1216 148 SPLLEIAP--DLSSYLEVVASLSGACLLIRREAFEKVGGFDERFFIY-YEDVDLCLRARKAGYKIYYVPDAIIYHKIGSS 224 (305)
T ss_pred cccccccc--cccchhhhhhhcceeeeEEcHHHHHHhCCCCccccee-ehHHHHHHHHHHcCCeEEEeeccEEEEeccCC
Confidence 11111000 0000001111589999999999999999999999996 99999999999999999999999999988665
Q ss_pred C
Q psy10463 432 S 432 (605)
Q Consensus 432 ~ 432 (605)
.
T Consensus 225 ~ 225 (305)
T COG1216 225 K 225 (305)
T ss_pred C
Confidence 4
No 8
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=99.94 E-value=3.3e-26 Score=226.27 Aligned_cols=210 Identities=19% Similarity=0.195 Sum_probs=151.0
Q ss_pred CcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHC---CCCEEEEeCCCCCCh-HH
Q psy10463 198 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKL---SVPTRVIRSPGRVGL-IK 273 (605)
Q Consensus 198 p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~---~~~v~~i~~~~n~G~-~~ 273 (605)
|+||||||+||++ +.|.++|+|+++|+++....||||||| |+|++.. .++++..++ ..+++++...++.|+ +.
T Consensus 1 p~vSViIp~yNe~-~~l~~~L~sl~~q~~~~~~~eIiVvD~-s~D~t~~-~~~~~~~~~~~~~~~i~~~~~~~~~G~k~~ 77 (232)
T cd06437 1 PMVTVQLPVFNEK-YVVERLIEAACALDYPKDRLEIQVLDD-STDETVR-LAREIVEEYAAQGVNIKHVRRADRTGYKAG 77 (232)
T ss_pred CceEEEEecCCcH-HHHHHHHHHHHhcCCCccceEEEEEEC-CCCcHHH-HHHHHHHHHhhcCCceEEEECCCCCCCchH
Confidence 6799999999999 999999999999998765579999998 8887554 455544332 236888877777785 88
Q ss_pred HHHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCC-eeEEecccccceeeeeccceeeEeec
Q psy10463 274 ARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDV-TFAYVRSFELHWGAFNWELHFRWYTY 352 (605)
Q Consensus 274 arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~-~~~~~~~~~~~~g~~~~~l~~~~~~~ 352 (605)
|+|.|++.|+|+||+|+|+|+.+.|+||+.+...+..+..+++++.+...+.. .+.. . ...+ ...+. ...
T Consensus 78 a~n~g~~~a~~~~i~~~DaD~~~~~~~l~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~-~-----~~~~--~~~~~-~~~ 148 (232)
T cd06437 78 ALAEGMKVAKGEYVAIFDADFVPPPDFLQKTPPYFADPKLGFVQTRWGHINANYSLLT-R-----VQAM--SLDYH-FTI 148 (232)
T ss_pred HHHHHHHhCCCCEEEEEcCCCCCChHHHHHhhhhhcCCCeEEEecceeeEcCCCchhh-H-----hhhh--hHHhh-hhH
Confidence 99999999999999999999999999999988777655556776654333221 1100 0 0000 00000 000
Q ss_pred CchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcc
Q psy10463 353 GSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFR 429 (605)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r 429 (605)
. .... ........+.|+.+++||+.|+++||||+.+ ..||+||++|+++.|+++.+.|++.+.|..+
T Consensus 149 ~--~~~~-----~~~~~~~~~~g~~~~~rr~~~~~vgg~~~~~---~~ED~~l~~rl~~~G~~~~~~~~~~v~~~~~ 215 (232)
T cd06437 149 E--QVAR-----SSTGLFFNFNGTAGVWRKECIEDAGGWNHDT---LTEDLDLSYRAQLKGWKFVYLDDVVVPAELP 215 (232)
T ss_pred h--HhhH-----hhcCCeEEeccchhhhhHHHHHHhCCCCCCc---chhhHHHHHHHHHCCCeEEEeccceeeeeCC
Confidence 0 0000 0001112345667789999999999999875 3799999999999999999999999998763
No 9
>KOG3736|consensus
Probab=99.94 E-value=6.6e-27 Score=249.03 Aligned_cols=376 Identities=24% Similarity=0.341 Sum_probs=232.5
Q ss_pred ceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhhhccCceEEEecCccccccccccccCCcceE
Q psy10463 123 KEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLVFNEEFLPKSSI 202 (605)
Q Consensus 123 ~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~~a~g~~i~~lD~d~~~~~~~~~~~~p~vSV 202 (605)
.|||+|||+|+.+.+...+++|++.+.. +++++.+++.|+.+||..|++.|+|++++|||++||+..+|+++.+
T Consensus 175 kEIiLVdD~S~~~~l~~~Ld~y~k~~~~-v~i~r~~~R~GLIrARl~GA~~A~geVL~FLDsHcE~n~gWLePLL----- 248 (578)
T KOG3736|consen 175 KEIILVDDFSDRDHLKDKLEEYVKRFSK-VRILRTKKREGLIRARLLGASMATGEVLTFLDSHCEVNVGWLEPLL----- 248 (578)
T ss_pred EEEEEeecCcchhhhhhhhHHHHhhhcc-eeEEeecchhhhHHHHhhhhhhhhchheeeeecceeEecCcchHHH-----
Confidence 5999999999999988889999999887 9999999999999999999999999999999999999999986433
Q ss_pred EEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhc
Q psy10463 203 VIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQA 282 (605)
Q Consensus 203 IIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A 282 (605)
..| .+........||-+-|..+... .... ...+.|+-...+
T Consensus 249 -------------~~I----~~~r~tvv~PvID~Id~~tf~y--------~~~~--------~~~rGgFdW~l~------ 289 (578)
T KOG3736|consen 249 -------------ARI----AEDRKTVVCPVIDVIDDNTFEY--------EKQS--------ELMRGGFDWELT------ 289 (578)
T ss_pred -------------HHh----hhcCceeecceEEeecCcCcee--------cccC--------ccceeeeeccee------
Confidence 221 1222222233443333333221 1100 011122211110
Q ss_pred cCCEEEEecCCcccCcChHHHHHHHHHcCC--cEEEeeeEeeecCCeeEEecccccc---eeeeeccceeeEeecCchhH
Q psy10463 283 EGEILVFLDAHCECTLGWLENLVARVAEDR--TRVVCPVIDIISDVTFAYVRSFELH---WGAFNWELHFRWYTYGSSDA 357 (605)
Q Consensus 283 ~gd~i~flD~D~~~~~~~L~~ll~~~~~~~--~~vv~p~i~~i~~~~~~~~~~~~~~---~g~~~~~l~~~~~~~~~~~~ 357 (605)
..= ..++..+....-.. ..| .....+-+..|+...|...++++.. ||+.+.+++|+.|.|++...
T Consensus 290 -------f~w-~~lP~~~~~~~~~~--t~PirsPtMaGglFAI~r~yF~eiG~yD~gMdiwGGENlElSfrvWqCGG~le 359 (578)
T KOG3736|consen 290 -------FKW-ERLPLPEEKRRELP--TDPIRSPTMAGGLFAIDRKYFGELGSYDEGMDIWGGENLELSFRVWQCGGRLE 359 (578)
T ss_pred -------EEe-ccCCccHhhcccCC--CCCcCCcccCCceEEeeHHHHhhccCccccccccChhhceeeEEEeccCCeEE
Confidence 000 11223332221111 111 1222233457888888766655432 99999999999999999887
Q ss_pred hhhccCCCCccc--ccccc-ceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcccCCCC
Q psy10463 358 IIKRKDFTEPFK--TPAMA-GGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRKASPY 434 (605)
Q Consensus 358 ~~~~~~~~~~~~--~~~~~-G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r~~~~~ 434 (605)
..++......++ .|... ++...+.|.... -..+|..|--++.++.+ |.
T Consensus 360 i~PCSrVGHifRk~~pY~~p~~~~~~~~N~~R-------lAeVWmDeyK~~~y~~~----------------------P~ 410 (578)
T KOG3736|consen 360 IVPCSRVGHIFRKRKPYTFPDGTDTATRNLKR-------LAEVWMDEYKEQFYKRM----------------------PG 410 (578)
T ss_pred ecCccceeeeeecCCCccCCCcchhhhhchhh-------hhhhhhHHHHHHHHhhC----------------------cc
Confidence 776655554443 22222 222333443332 13566555555554432 11
Q ss_pred CCCCCcchhhhhhHHHHHHHHhhhhHhhhhccCchhhccC----CccchHHHHHHhhhcCCccccc------ccccccCC
Q psy10463 435 SFPGGVSEVLYGNLARVALVWMDEWAEFYFKFNPEAEKQR----DKQAVRSRLELRKQLKCHSFKW------YLTHVWPH 504 (605)
Q Consensus 435 ~~~~~~~~~~~rn~~r~a~~W~d~~k~~~~~~~p~~~~~~----~~g~~~~r~~lr~~l~ck~f~w------yl~~v~p~ 504 (605)
......++...|-..|-. .=++.|+||+.+++|+..... ..|.+.. ...-.|.+-.- .---+|||
T Consensus 411 ~~~~d~GDvseR~~LR~~-L~CKsFkWyL~nVyPel~~~~~~~~~~G~i~~----~~~~~cld~~~~~~~~~~~~~~~~C 485 (578)
T KOG3736|consen 411 LRNIDEGDLTERKALRER-LNCKSFKWYLENVYPELYLPTPHVYASGEIRN----GNPNLCLDTERAPAGQGMAVGLYPC 485 (578)
T ss_pred ccccCCCCchhHHHHHHh-cCCccccchHhhcCccccCCCCcccccceecc----CCcchhhhhhchhccCCCcceEecC
Confidence 112233344444444432 237889999999999754322 2344433 11222322221 23447899
Q ss_pred CcCCCCCc----cccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeec-CCCeeeecCCC
Q psy10463 505 HFLPMDDK----FFGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT-DESVCLDVPEY 579 (605)
Q Consensus 505 ~~~p~~~~----~~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~-~~~~CLd~~~~ 579 (605)
|....++. ..|+|+.. ..|||+. .. |+ |.|.+| |..+ ||.|.|. ..|.|.+ .+++||++...
T Consensus 486 h~~~~~Q~~~yT~~~eir~~--~~cl~~~--~~-----~~-v~l~~C-~~~~-~q~w~~~-~~~~i~~~~sg~CL~~~~~ 552 (578)
T KOG3736|consen 486 HGPGGNQYFPYTKQGEIRIG--DLCLDVD--DA-----GK-VTLYDC-HKMG-NQLWHYD-KDGTLYHRNSGKCLEAAVD 552 (578)
T ss_pred CCccccccccccCCcceEEC--CEEeccc--cC-----Cc-eEEEec-cccc-ccceEEc-CCCceEcCCCCccccccCC
Confidence 98876553 45899884 5999985 11 23 999999 6655 9999999 5588875 57899999875
Q ss_pred CCCCCCceEEEeCCCCC-CcceEeCC
Q psy10463 580 ENDISPRVRILACSGFN-RQRWTYDK 604 (605)
Q Consensus 580 ~~~~g~~v~l~~C~~~~-~Q~W~~~~ 604 (605)
.. .+.+..|+.++ .|+|.+..
T Consensus 553 ~~----~~~l~~c~~~~~~Q~W~~~~ 574 (578)
T KOG3736|consen 553 KN----GLILVACDPSDPTQQWLFEH 574 (578)
T ss_pred CC----CceEeecCCCCCcceEEEEe
Confidence 43 29999999988 99999853
No 10
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=99.93 E-value=1.5e-25 Score=221.89 Aligned_cols=206 Identities=19% Similarity=0.150 Sum_probs=151.4
Q ss_pred eEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCCh-HHHHHHHH
Q psy10463 201 SIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGL-IKARLLGA 279 (605)
Q Consensus 201 SVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~-~~arN~G~ 279 (605)
|||||+||++...|.++|+|+.+|+++. +|||||||+|+|++..+.++++.++.+.+++++....+.|. ++|+|.|+
T Consensus 1 siiip~~ne~~~~l~~~l~sl~~q~~~~--~eiiVvdd~s~D~t~~~~i~~~~~~~~~~i~~i~~~~~~G~~~~a~n~g~ 78 (236)
T cd06435 1 SIHVPCYEEPPEMVKETLDSLAALDYPN--FEVIVIDNNTKDEALWKPVEAHCAQLGERFRFFHVEPLPGAKAGALNYAL 78 (236)
T ss_pred CeeEeeCCCcHHHHHHHHHHHHhCCCCC--cEEEEEeCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCchHHHHHHH
Confidence 7999999997358999999999999876 79999999999997766777777776657889988888886 89999999
Q ss_pred hhcc--CCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhH
Q psy10463 280 RQAE--GEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDA 357 (605)
Q Consensus 280 ~~A~--gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~ 357 (605)
+.|. +|||+|+|+|+.++|+||+.++..+++...+++++.....+..... . .....|. + ....
T Consensus 79 ~~a~~~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~------~-~~~~~~~----~----~~~~ 143 (236)
T cd06435 79 ERTAPDAEIIAVIDADYQVEPDWLKRLVPIFDDPRVGFVQAPQDYRDGEESL------F-KRMCYAE----Y----KGFF 143 (236)
T ss_pred HhcCCCCCEEEEEcCCCCcCHHHHHHHHHHhcCCCeeEEecCccccCCCccH------H-HHHHhHH----H----HHHH
Confidence 9986 6999999999999999999999999755556665432221111000 0 0000000 0 0000
Q ss_pred hhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEE
Q psy10463 358 IIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHL 427 (605)
Q Consensus 358 ~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~ 427 (605)
..... ...........|+++++||++|+++||||+.+ ..||+||++|+++.|+++.+.|.+.++|.
T Consensus 144 ~~~~~-~~~~~~~~~~~g~~~~~rr~~~~~iGgf~~~~---~~eD~dl~~r~~~~G~~~~~~~~~~~~~~ 209 (236)
T cd06435 144 DIGMV-SRNERNAIIQHGTMCLIRRSALDDVGGWDEWC---ITEDSELGLRMHEAGYIGVYVAQSYGHGL 209 (236)
T ss_pred HHHhc-cccccCceEEecceEEEEHHHHHHhCCCCCcc---ccchHHHHHHHHHCCcEEEEcchhhccCc
Confidence 00000 00111123456788999999999999999976 37999999999999999999999877553
No 11
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.93 E-value=1e-25 Score=217.24 Aligned_cols=198 Identities=15% Similarity=0.137 Sum_probs=150.9
Q ss_pred eEEEEeechh-hHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHH
Q psy10463 201 SIVIVFHNEA-WSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGA 279 (605)
Q Consensus 201 SVIIp~~n~~-~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~ 279 (605)
|||||+||++ ...|.+||.|+++|+++. .|||||||||+++.+.++++++.++.+ +++++.+.|.|++.|+|.|+
T Consensus 1 sviip~~n~~~~~~l~~~l~Sl~~q~~~~--~eiiivdd~ss~d~t~~~~~~~~~~~~--i~~i~~~~n~G~~~a~N~g~ 76 (201)
T cd04195 1 SVLMSVYIKEKPEFLREALESILKQTLPP--DEVVLVKDGPVTQSLNEVLEEFKRKLP--LKVVPLEKNRGLGKALNEGL 76 (201)
T ss_pred CEEEEccccchHHHHHHHHHHHHhcCCCC--cEEEEEECCCCchhHHHHHHHHHhcCC--eEEEEcCccccHHHHHHHHH
Confidence 7999999987 248999999999999875 699999999966667778888877665 99999999999999999999
Q ss_pred hhccCCEEEEecCCcccCcChHHHHHHHHHcCC-cEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHh
Q psy10463 280 RQAEGEILVFLDAHCECTLGWLENLVARVAEDR-TRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAI 358 (605)
Q Consensus 280 ~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~-~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~ 358 (605)
+.|+|+||+|+|+|+.+.|++|+.+++.+.+++ ..++++....++.+........ .........
T Consensus 77 ~~a~gd~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~ 141 (201)
T cd04195 77 KHCTYDWVARMDTDDISLPDRFEKQLDFIEKNPEIDIVGGGVLEFDSDGNDIGKRR---------------LPTSHDDIL 141 (201)
T ss_pred HhcCCCEEEEeCCccccCcHHHHHHHHHHHhCCCeEEEcccEEEECCCCCeecccc---------------CCCCHHHHH
Confidence 999999999999999999999999999997764 4566655544333221111000 000011100
Q ss_pred hhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEE
Q psy10463 359 IKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAH 426 (605)
Q Consensus 359 ~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H 426 (605)
. ...... .+.+++++++|++|+++|+|++. . ++||++|++|+.++|+++.++|.+.+.+
T Consensus 142 ~-~~~~~~-----~~~~~~~~~rr~~~~~~g~~~~~-~--~~eD~~~~~r~~~~g~~~~~~~~~~~~y 200 (201)
T cd04195 142 K-FARRRS-----PFNHPTVMFRKSKVLAVGGYQDL-P--LVEDYALWARMLANGARFANLPEILVKA 200 (201)
T ss_pred H-HhccCC-----CCCChHHhhhHHHHHHcCCcCCC-C--CchHHHHHHHHHHcCCceecccHHHhhc
Confidence 0 000111 23445678999999999999987 2 5899999999999999999999887654
No 12
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=99.93 E-value=1.3e-25 Score=223.32 Aligned_cols=207 Identities=15% Similarity=0.100 Sum_probs=145.8
Q ss_pred CcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHH
Q psy10463 198 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLL 277 (605)
Q Consensus 198 p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~ 277 (605)
|.+|||||+||++ ..|.++|+|+++|+++...+|||||||+|+|++.. .++++......++.++....+.|.+.|+|.
T Consensus 1 p~vsIiIp~~Ne~-~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~-i~~~~~~~~~~~i~~~~~~~~~G~~~a~n~ 78 (241)
T cd06427 1 PVYTILVPLYKEA-EVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIA-AARALRLPSIFRVVVVPPSQPRTKPKACNY 78 (241)
T ss_pred CeEEEEEecCCcH-HHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHH-HHHHhccCCCeeEEEecCCCCCchHHHHHH
Confidence 7899999999999 99999999999999875558999999999998544 566654321225666667778899999999
Q ss_pred HHhhccCCEEEEecCCcccCcChHHHHHHHHHcC-Cc-EEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCch
Q psy10463 278 GARQAEGEILVFLDAHCECTLGWLENLVARVAED-RT-RVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSS 355 (605)
Q Consensus 278 G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~-~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~ 355 (605)
|+++|+||||+|+|+|+.++|+||+++++.+.++ .. .++++.+...+.... . . ...+ .+.+. .....
T Consensus 79 g~~~a~gd~i~~~DaD~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-----~-~-~~~~--~~~~~--~~~~~ 147 (241)
T cd06427 79 ALAFARGEYVVIYDAEDAPDPDQLKKAVAAFARLDDKLACVQAPLNYYNAREN-----W-L-TRMF--ALEYA--AWFDY 147 (241)
T ss_pred HHHhcCCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEeCceEeeCCCcc-----H-H-HHHH--HHHHH--HHHHH
Confidence 9999999999999999999999999999999764 33 454544322211100 0 0 0000 00000 00000
Q ss_pred hHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEE
Q psy10463 356 DAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHV 424 (605)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v 424 (605)
.... ...... ...+.|++++++|++|+++||||+.. ..||.||++|+++.|+++.++|...+
T Consensus 148 ~~~~-~~~~~~---~~~~~g~~~~~rr~~~~~vgg~~~~~---~~eD~~l~~rl~~~G~r~~~~~~~~~ 209 (241)
T cd06427 148 LLPG-LARLGL---PIPLGGTSNHFRTDVLRELGGWDPFN---VTEDADLGLRLARAGYRTGVLNSTTL 209 (241)
T ss_pred HHHH-HHhcCC---eeecCCchHHhhHHHHHHcCCCCccc---chhhHHHHHHHHHCCceEEEeccccc
Confidence 0000 000011 11346778899999999999999843 37999999999999999999987543
No 13
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=99.93 E-value=7.3e-25 Score=207.78 Aligned_cols=180 Identities=22% Similarity=0.361 Sum_probs=141.6
Q ss_pred EEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEE-EeCCCCCChHHHHHHHHh
Q psy10463 202 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRV-IRSPGRVGLIKARLLGAR 280 (605)
Q Consensus 202 VIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~-i~~~~n~G~~~arN~G~~ 280 (605)
||||+||+. ..|.++|.|+.+|+++. .|||||||+|+|++ .+.++++.+..+.++.. ++.+.+.|.+.++|.|++
T Consensus 1 ivip~~n~~-~~l~~~l~sl~~q~~~~--~eiivvdd~s~d~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~g~~ 76 (182)
T cd06420 1 LIITTYNRP-EALELVLKSVLNQSILP--FEVIIADDGSTEET-KELIEEFKSQFPIPIKHVWQEDEGFRKAKIRNKAIA 76 (182)
T ss_pred CEEeecCCh-HHHHHHHHHHHhccCCC--CEEEEEeCCCchhH-HHHHHHHHhhcCCceEEEEcCCcchhHHHHHHHHHH
Confidence 699999999 99999999999999765 79999999999974 45677776654434444 444445678899999999
Q ss_pred hccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhhh
Q psy10463 281 QAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIK 360 (605)
Q Consensus 281 ~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~ 360 (605)
.|+|+||+|||+|+.+.++||+.+++.+ .....++++.+. .+...
T Consensus 77 ~a~g~~i~~lD~D~~~~~~~l~~~~~~~-~~~~~v~g~~~~-~~~~~--------------------------------- 121 (182)
T cd06420 77 AAKGDYLIFIDGDCIPHPDFIADHIELA-EPGVFLSGSRVL-LNEKL--------------------------------- 121 (182)
T ss_pred HhcCCEEEEEcCCcccCHHHHHHHHHHh-CCCcEEecceee-ccccc---------------------------------
Confidence 9999999999999999999999999988 333344443321 00000
Q ss_pred ccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCe-EEEecceEEEEEc
Q psy10463 361 RKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGS-IEIAPCSHVAHLF 428 (605)
Q Consensus 361 ~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~-i~~~p~s~v~H~~ 428 (605)
......|++++++|+.|.++||||+.+..|++||+||++|++++|++ ..+.|.+.++|.+
T Consensus 122 --------~~~~~~~~~~~~~r~~~~~~ggf~~~~~~~~~eD~~l~~r~~~~g~~~~~~~~~~~~~h~~ 182 (182)
T cd06420 122 --------TERGIRGCNMSFWKKDLLAVNGFDEEFTGWGGEDSELVARLLNSGIKFRKLKFAAIVFHLW 182 (182)
T ss_pred --------ceeEeccceEEEEHHHHHHhCCCCcccccCCcchHHHHHHHHHcCCcEEEecccceeeecC
Confidence 00245577889999999999999999999999999999999999955 4555688888864
No 14
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=99.93 E-value=8.3e-25 Score=222.18 Aligned_cols=214 Identities=26% Similarity=0.392 Sum_probs=150.3
Q ss_pred eEEEEeechhh-----HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCC---CChH
Q psy10463 201 SIVIVFHNEAW-----SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGR---VGLI 272 (605)
Q Consensus 201 SVIIp~~n~~~-----~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n---~G~~ 272 (605)
|||||++++.. +.+..||.++..+..+. ..||||||++|++.. .+.+.++.+... .++++..+.. .|.+
T Consensus 1 SiIIPv~~~~~~~~i~~~l~~~l~~l~~~~~~~-~~eiIvvd~~s~~~~-~~~l~~~~~~~~-~~~~i~~~~~~~~f~~a 77 (281)
T PF10111_consen 1 SIIIPVRNRSERPDILERLRNCLESLSQFQSDP-DFEIIVVDDGSSDEF-DEELKKLCEKNG-FIRYIRHEDNGEPFSRA 77 (281)
T ss_pred CEEEEecCCccchHHHHHHHHHHHHHHhcCCCC-CEEEEEEECCCchhH-HHHHHHHHhccC-ceEEEEcCCCCCCcCHH
Confidence 79999999982 24555667776644332 389999999999874 335666666655 4446666544 5999
Q ss_pred HHHHHHHhhccCCEEEEecCCcccCcChHHHHHH---HHHcCC-cEEEeeeEeeecCCeeEEecccccceeeeeccceee
Q psy10463 273 KARLLGARQAEGEILVFLDAHCECTLGWLENLVA---RVAEDR-TRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFR 348 (605)
Q Consensus 273 ~arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~---~~~~~~-~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~ 348 (605)
.|||.|++.|++|+|+|+|+|+.++|++++.++. .+..++ ..++.|....-...+.... ....
T Consensus 78 ~arN~g~~~A~~d~l~flD~D~i~~~~~i~~~~~~~~~l~~~~~~~~~~p~~yl~~~~~~~~~-------~~~~------ 144 (281)
T PF10111_consen 78 KARNIGAKYARGDYLIFLDADCIPSPDFIEKLLNHVKKLDKNPNAFLVYPCLYLSEEGSEKFY-------SQFK------ 144 (281)
T ss_pred HHHHHHHHHcCCCEEEEEcCCeeeCHHHHHHHHHHHHHHhcCCCceEEEeeeeccchhhHHHh-------hcch------
Confidence 9999999999999999999999999999999999 676665 4555565422111111100 0000
Q ss_pred EeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEc
Q psy10463 349 WYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLF 428 (605)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~ 428 (605)
..................+....+.|+|++++|+.|.++|||||.|.+||+||.||+.|+.+.|..+...|...++|..
T Consensus 145 -~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~r~~f~~iGGfDE~f~G~G~ED~D~~~RL~~~~~~~~~~~~~~~~~~~ 223 (281)
T PF10111_consen 145 -NLWDHEFLESFISGKNSLWEFIAFASSCFLINREDFLEIGGFDERFRGWGYEDIDFGYRLKKAGYKFKRSPDYLVYHSH 223 (281)
T ss_pred -hcchHHHHHHHhhccccccccccccceEEEEEHHHHHHhCCCCccccCCCcchHHHHHHHHHcCCcEecChHHhccccc
Confidence 0000010100011111222234567799999999999999999999999999999999999999999999999998876
Q ss_pred ccC
Q psy10463 429 RKA 431 (605)
Q Consensus 429 r~~ 431 (605)
...
T Consensus 224 ~~~ 226 (281)
T PF10111_consen 224 RWP 226 (281)
T ss_pred CCC
Confidence 443
No 15
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=99.93 E-value=3.8e-25 Score=218.40 Aligned_cols=210 Identities=17% Similarity=0.140 Sum_probs=151.9
Q ss_pred CcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCCh-HHHHH
Q psy10463 198 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGL-IKARL 276 (605)
Q Consensus 198 p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~-~~arN 276 (605)
|+||||||+||++...+.++|+|+++|+++...+|||||||+|+|+ +.+.++++..+. +++++..+.+.|. ++++|
T Consensus 1 p~vsviip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~-t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~n 77 (234)
T cd06421 1 PTVDVFIPTYNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPE-LRALAAELGVEY--GYRYLTRPDNRHAKAGNLN 77 (234)
T ss_pred CceEEEEecCCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchh-HHHHHHHhhccc--CceEEEeCCCCCCcHHHHH
Confidence 6899999999986367899999999999877557999999999987 455677765543 4677777766664 67789
Q ss_pred HHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCC-cEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCch
Q psy10463 277 LGARQAEGEILVFLDAHCECTLGWLENLVARVAEDR-TRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSS 355 (605)
Q Consensus 277 ~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~-~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~ 355 (605)
.|++.|+||||+|+|+|+.++|+||+.+++.+.+++ .+++++.....+...... . ...+.+. ..
T Consensus 78 ~~~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~-----~-~~~~~~~---------~~ 142 (234)
T cd06421 78 NALAHTTGDFVAILDADHVPTPDFLRRTLGYFLDDPKVALVQTPQFFYNPDPFDW-----L-ADGAPNE---------QE 142 (234)
T ss_pred HHHHhCCCCEEEEEccccCcCccHHHHHHHHHhcCCCeEEEecceEEecCCcchh-----H-HHHHHHH---------HH
Confidence 999999999999999999999999999999998844 455554432222211100 0 0000000 00
Q ss_pred hHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEc
Q psy10463 356 DAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLF 428 (605)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~ 428 (605)
...................|+++++||++|+++|||++.+. +||++|++|+++.|+++.++|.+.++|..
T Consensus 143 ~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~~~ig~~~~~~~---~eD~~l~~r~~~~g~~i~~~~~~~~~~~~ 212 (234)
T cd06421 143 LFYGVIQPGRDRWGAAFCCGSGAVVRREALDEIGGFPTDSV---TEDLATSLRLHAKGWRSVYVPEPLAAGLA 212 (234)
T ss_pred HHHHHHHHHHhhcCCceecCceeeEeHHHHHHhCCCCccce---eccHHHHHHHHHcCceEEEecCccccccC
Confidence 00000000001122445678899999999999999997653 79999999999999999999999887654
No 16
>PRK11204 N-glycosyltransferase; Provisional
Probab=99.93 E-value=9.7e-25 Score=235.08 Aligned_cols=210 Identities=19% Similarity=0.223 Sum_probs=160.3
Q ss_pred ccCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHH
Q psy10463 195 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKA 274 (605)
Q Consensus 195 ~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~a 274 (605)
...|.+|||||+|||+ +.+.++++|+++|+++. +|||||||||+|++ .+.++++.++++ ++++++.++|.|.+.|
T Consensus 51 ~~~p~vsViIp~yne~-~~i~~~l~sl~~q~yp~--~eiiVvdD~s~d~t-~~~l~~~~~~~~-~v~~i~~~~n~Gka~a 125 (420)
T PRK11204 51 KEYPGVSILVPCYNEG-ENVEETISHLLALRYPN--YEVIAINDGSSDNT-GEILDRLAAQIP-RLRVIHLAENQGKANA 125 (420)
T ss_pred CCCCCEEEEEecCCCH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCccH-HHHHHHHHHhCC-cEEEEEcCCCCCHHHH
Confidence 3478999999999999 99999999999999886 79999999999984 557788888777 8999998999999999
Q ss_pred HHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecC
Q psy10463 275 RLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYG 353 (605)
Q Consensus 275 rN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~ 353 (605)
+|.|++.|+|||++++|+|+.++|++|+.+++.+++++. +++++.....+..++. +. ...+.+. ...
T Consensus 126 ln~g~~~a~~d~i~~lDaD~~~~~d~L~~l~~~~~~~~~v~~v~g~~~~~~~~~~~--~~--~~~~~~~--------~~~ 193 (420)
T PRK11204 126 LNTGAAAARSEYLVCIDGDALLDPDAAAYMVEHFLHNPRVGAVTGNPRIRNRSTLL--GR--IQVGEFS--------SII 193 (420)
T ss_pred HHHHHHHcCCCEEEEECCCCCCChhHHHHHHHHHHhCCCeEEEECCceeccchhHH--HH--HHHHHHH--------Hhh
Confidence 999999999999999999999999999999999976654 5554332221111100 00 0000000 000
Q ss_pred chhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEc
Q psy10463 354 SSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLF 428 (605)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~ 428 (605)
.. ... .... .-....++|+++++||+.++++||||+.+. .||.|+++|+.++|+++.+.|++.++|..
T Consensus 194 ~~-~~~-~~~~--~~~~~~~~G~~~~~rr~~l~~vgg~~~~~~---~ED~~l~~rl~~~G~~i~~~p~~~~~~~~ 261 (420)
T PRK11204 194 GL-IKR-AQRV--YGRVFTVSGVITAFRKSALHEVGYWSTDMI---TEDIDISWKLQLRGWDIRYEPRALCWILM 261 (420)
T ss_pred hH-HHH-HHHH--hCCceEecceeeeeeHHHHHHhCCCCCCcc---cchHHHHHHHHHcCCeEEeccccEEEeEC
Confidence 00 000 0000 011234678899999999999999999874 79999999999999999999999998875
No 17
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=99.93 E-value=9.1e-25 Score=213.94 Aligned_cols=206 Identities=18% Similarity=0.228 Sum_probs=149.2
Q ss_pred EEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCC-CEEEEe----CCCCCChHHHHH
Q psy10463 202 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSV-PTRVIR----SPGRVGLIKARL 276 (605)
Q Consensus 202 VIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~-~v~~i~----~~~n~G~~~arN 276 (605)
||||+||++ +.|.+||.|+++|+++. .+|||||||||+|++ .+.++++.++++. +++++. .+.+.|++.|+|
T Consensus 1 ViIp~yn~~-~~l~~~l~sl~~q~~~~-~~eiiVvDd~S~d~t-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~a~N 77 (219)
T cd06913 1 IILPVHNGE-QWLDECLESVLQQDFEG-TLELSVFNDASTDKS-AEIIEKWRKKLEDSGVIVLVGSHNSPSPKGVGYAKN 77 (219)
T ss_pred CEEeecCcH-HHHHHHHHHHHhCCCCC-CEEEEEEeCCCCccH-HHHHHHHHHhCcccCeEEEEecccCCCCccHHHHHH
Confidence 699999999 99999999999999763 279999999999985 4578888776542 567664 345689999999
Q ss_pred HHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchh
Q psy10463 277 LGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSD 356 (605)
Q Consensus 277 ~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~ 356 (605)
.|++.|+||||+|||+|+.+.|+||+.++..+.+++..++++.+......... . .. .|. .......
T Consensus 78 ~g~~~a~gd~i~~lD~D~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~---~----~~--~~~-----~~~~~~~ 143 (219)
T cd06913 78 QAIAQSSGRYLCFLDSDDVMMPQRIRLQYEAALQHPNSIIGCQVRRIPEDSTE---R----YT--RWI-----NTLTREQ 143 (219)
T ss_pred HHHHhcCCCEEEEECCCccCChhHHHHHHHHHHhCCCcEEEEEEEecCcccch---h----hH--HHH-----HhcCHHH
Confidence 99999999999999999999999999999998887776666554322221110 0 00 000 0001000
Q ss_pred HhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcc
Q psy10463 357 AIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFR 429 (605)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r 429 (605)
......... .+.+....++++|++|+++||||+.+.. .+||++|++|+.+.|+++.++|.+.+.+..+
T Consensus 144 ~~~~~~~~~----~~~~~~~~~~~rr~~~~~~g~f~~~~~~-~~eD~~l~~r~~~~g~~i~~~~~~~~~yr~~ 211 (219)
T cd06913 144 LLTQVYTSH----GPTVIMPTWFCSREWFSHVGPFDEGGKG-VPEDLLFFYEHLRKGGGVYRVDRCLLLYRYH 211 (219)
T ss_pred HHHHHHhhc----CCccccccceeehhHHhhcCCccchhcc-chhHHHHHHHHHHcCCceEEEcceeeeeeec
Confidence 000000000 1122223467999999999999998654 3799999999999999999999988876553
No 18
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.92 E-value=2e-24 Score=208.63 Aligned_cols=174 Identities=22% Similarity=0.259 Sum_probs=146.3
Q ss_pred EEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhh
Q psy10463 202 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQ 281 (605)
Q Consensus 202 VIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~ 281 (605)
||||+||++ +.|.++|.|+++|+++. .|||||||||+|++ .+.++++.... +++++..++|.|.+.++|.|++.
T Consensus 1 viI~~~n~~-~~l~~~l~sl~~q~~~~--~eiiivD~~s~d~t-~~~~~~~~~~~--~i~~~~~~~n~g~~~~~n~~~~~ 74 (202)
T cd04185 1 AVVVTYNRL-DLLKECLDALLAQTRPP--DHIIVIDNASTDGT-AEWLTSLGDLD--NIVYLRLPENLGGAGGFYEGVRR 74 (202)
T ss_pred CEEEeeCCH-HHHHHHHHHHHhccCCC--ceEEEEECCCCcch-HHHHHHhcCCC--ceEEEECccccchhhHHHHHHHH
Confidence 699999999 99999999999999875 69999999999974 44666654433 38999999999999999999887
Q ss_pred c---cCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHh
Q psy10463 282 A---EGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAI 358 (605)
Q Consensus 282 A---~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~ 358 (605)
| ++|+++|+|+|+.++++||+.+++.+.+....+++|.+...+.
T Consensus 75 a~~~~~d~v~~ld~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~--------------------------------- 121 (202)
T cd04185 75 AYELGYDWIWLMDDDAIPDPDALEKLLAYADKDNPQFLAPLVLDPDG--------------------------------- 121 (202)
T ss_pred HhccCCCEEEEeCCCCCcChHHHHHHHHHHhcCCceEecceeEcCCC---------------------------------
Confidence 6 7999999999999999999999999985555666554311000
Q ss_pred hhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcccC
Q psy10463 359 IKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRKA 431 (605)
Q Consensus 359 ~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r~~ 431 (605)
.+++++++|+.|+++|+||+.+..| +||.||+.|+++.|+++ +.|.+.++|....+
T Consensus 122 ---------------~~~~~~~~~~~~~~~g~~~~~~~~~-~eD~~~~~r~~~~G~~i-~~~~~~~~h~~~~~ 177 (202)
T cd04185 122 ---------------SFVGVLISRRVVEKIGLPDKEFFIW-GDDTEYTLRASKAGPGI-YVPDAVVVHKTAIN 177 (202)
T ss_pred ---------------ceEEEEEeHHHHHHhCCCChhhhcc-chHHHHHHHHHHcCCcE-EecceEEEEccccc
Confidence 2345789999999999999998875 79999999999999999 99999999987554
No 19
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=99.92 E-value=7.6e-25 Score=215.66 Aligned_cols=208 Identities=25% Similarity=0.343 Sum_probs=132.4
Q ss_pred CcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCC-CEEEEeCCCCCC---hHH
Q psy10463 198 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSV-PTRVIRSPGRVG---LIK 273 (605)
Q Consensus 198 p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~-~v~~i~~~~n~G---~~~ 273 (605)
|.||||||+||+. +.+.++|.|+++|+++. .||+||||+|++++ .+.++++.+.++. +++++..+.+.| .+.
T Consensus 1 P~v~Vvip~~~~~-~~l~~~l~sl~~~~~~~--~~v~vvd~~~~~~~-~~~~~~~~~~~~~~~v~vi~~~~~~g~~~k~~ 76 (228)
T PF13641_consen 1 PRVSVVIPAYNED-DVLRRCLESLLAQDYPR--LEVVVVDDGSDDET-AEILRALAARYPRVRVRVIRRPRNPGPGGKAR 76 (228)
T ss_dssp --EEEE--BSS-H-HHHHHHHHHHTTSHHHT--EEEEEEEE-SSS-G-CTTHHHHHHTTGG-GEEEEE----HHHHHHHH
T ss_pred CEEEEEEEecCCH-HHHHHHHHHHHcCCCCC--eEEEEEECCCChHH-HHHHHHHHHHcCCCceEEeecCCCCCcchHHH
Confidence 7799999999999 89999999999998755 89999999998874 4467788787773 578998877666 678
Q ss_pred HHHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecC
Q psy10463 274 ARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYG 353 (605)
Q Consensus 274 arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~ 353 (605)
|+|.|++++++|+|+|+|+|+.++|+||+.+++.+.....+++++.+...+...+ ..... . +.+.....
T Consensus 77 a~n~~~~~~~~d~i~~lD~D~~~~p~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~-------~--~~~~~~~~- 145 (228)
T PF13641_consen 77 ALNEALAAARGDYILFLDDDTVLDPDWLERLLAAFADPGVGAVGGPVFPDNDRNW-LTRLQ-------D--LFFARWHL- 145 (228)
T ss_dssp HHHHHHHH---SEEEEE-SSEEE-CHHHHHHHHHHHBSS--EEEEEEEETTCCCE-EEE-T-------T----S-EETT-
T ss_pred HHHHHHHhcCCCEEEEECCCcEECHHHHHHHHHHHHhCCCCeEeeeEeecCCCCH-HHHHH-------H--HHHhhhhh-
Confidence 8999999999999999999999999999999999966666766666533222211 00000 0 00000000
Q ss_pred chhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcc
Q psy10463 354 SSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFR 429 (605)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r 429 (605)
. ............+.|++++++|++|+++||||+ +. .+||++|++|+++.|+++.+.|.+.+.|..+
T Consensus 146 -~-----~~~~~~~~~~~~~~G~~~~~rr~~~~~~g~fd~-~~--~~eD~~l~~r~~~~G~~~~~~~~~~v~~~~~ 212 (228)
T PF13641_consen 146 -R-----FRSGRRALGVAFLSGSGMLFRRSALEEVGGFDP-FI--LGEDFDLCLRLRAAGWRIVYAPDALVYHEEP 212 (228)
T ss_dssp -T-----S-TT-B----S-B--TEEEEEHHHHHHH-S--S-SS--SSHHHHHHHHHHHTT--EEEEEEEEEEE--S
T ss_pred -h-----hhhhhcccceeeccCcEEEEEHHHHHHhCCCCC-CC--cccHHHHHHHHHHCCCcEEEECCcEEEEeCC
Confidence 0 001112223455678999999999999999999 32 4699999999999999999999999999863
No 20
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=99.92 E-value=3.1e-24 Score=213.74 Aligned_cols=210 Identities=24% Similarity=0.275 Sum_probs=155.5
Q ss_pred cceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHH
Q psy10463 199 KSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLG 278 (605)
Q Consensus 199 ~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G 278 (605)
++|||||+||++ +.+.++|.|+.+|+++...+|||||||+|+|++ .+.++.+..+.+ .++++..+ +.|.+.|+|.|
T Consensus 1 ~~sIiip~~n~~-~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~-~~~~~~~~~~~~-~v~~i~~~-~~~~~~a~N~g 76 (249)
T cd02525 1 FVSIIIPVRNEE-KYIEELLESLLNQSYPKDLIEIIVVDGGSTDGT-REIVQEYAAKDP-RIRLIDNP-KRIQSAGLNIG 76 (249)
T ss_pred CEEEEEEcCCch-hhHHHHHHHHHhccCCCCccEEEEEeCCCCccH-HHHHHHHHhcCC-eEEEEeCC-CCCchHHHHHH
Confidence 479999999999 999999999999987644489999999999974 557777777665 79999866 46899999999
Q ss_pred HhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHh
Q psy10463 279 ARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAI 358 (605)
Q Consensus 279 ~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~ 358 (605)
++.|++|||+|||+|+.+.|+||+++++.+.+.+..++++.........+.. .+.+..... .........
T Consensus 77 ~~~a~~d~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---------~~~~~~~~~-~~~~~~~~~ 146 (249)
T cd02525 77 IRNSRGDIIIRVDAHAVYPKDYILELVEALKRTGADNVGGPMETIGESKFQK---------AIAVAQSSP-LGSGGSAYR 146 (249)
T ss_pred HHHhCCCEEEEECCCccCCHHHHHHHHHHHhcCCCCEEecceecCCCChHHH---------HHHHHhhch-hccCCcccc
Confidence 9999999999999999999999999999888776655554442222221100 000000000 000000000
Q ss_pred hhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcc
Q psy10463 359 IKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFR 429 (605)
Q Consensus 359 ~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r 429 (605)
..... ......|++++++|++|.++|+||+.+. .+||.||++|++++|+++.++|.+.+.|..+
T Consensus 147 ---~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~eD~~l~~r~~~~G~~~~~~~~~~~~~~~~ 210 (249)
T cd02525 147 ---GGAVK--IGYVDTVHHGAYRREVFEKVGGFDESLV--RNEDAELNYRLRKAGYKIWLSPDIRVYYYPR 210 (249)
T ss_pred ---ccccc--cccccccccceEEHHHHHHhCCCCcccC--ccchhHHHHHHHHcCcEEEEcCCeEEEEcCC
Confidence 00000 0224567788999999999999999876 4799999999999999999999999998763
No 21
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=99.92 E-value=4.4e-24 Score=230.83 Aligned_cols=209 Identities=21% Similarity=0.224 Sum_probs=159.4
Q ss_pred cCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHH
Q psy10463 196 FLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKAR 275 (605)
Q Consensus 196 ~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~ar 275 (605)
..|.||||||+|||+ ..+.++|+|+++|+++. +|||||||||+|++ .+.++++.++++ ++++++.+.|.|.+.|+
T Consensus 73 ~~p~vsViIP~yNE~-~~i~~~l~sll~q~yp~--~eIivVdDgs~D~t-~~~~~~~~~~~~-~v~vv~~~~n~Gka~Al 147 (444)
T PRK14583 73 GHPLVSILVPCFNEG-LNARETIHAALAQTYTN--IEVIAINDGSSDDT-AQVLDALLAEDP-RLRVIHLAHNQGKAIAL 147 (444)
T ss_pred CCCcEEEEEEeCCCH-HHHHHHHHHHHcCCCCC--eEEEEEECCCCccH-HHHHHHHHHhCC-CEEEEEeCCCCCHHHHH
Confidence 468999999999999 89999999999999886 79999999999984 557788878777 89999989999999999
Q ss_pred HHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCc
Q psy10463 276 LLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGS 354 (605)
Q Consensus 276 N~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~ 354 (605)
|.|++.|+|||++++|+|+.++|++|+.+++.+.+++. +++++.....+.+++. .. ...+.+. ..+ .
T Consensus 148 N~gl~~a~~d~iv~lDAD~~~~~d~L~~lv~~~~~~~~~g~v~g~~~~~~~~~~~--~~--~~~~e~~--~~~---~--- 215 (444)
T PRK14583 148 RMGAAAARSEYLVCIDGDALLDKNAVPYLVAPLIANPRTGAVTGNPRIRTRSTLI--GR--VQVGEFS--SII---G--- 215 (444)
T ss_pred HHHHHhCCCCEEEEECCCCCcCHHHHHHHHHHHHhCCCeEEEEccceecCCCcch--hh--HHHHHHH--HHH---H---
Confidence 99999999999999999999999999999999876654 5554332222221110 00 0000000 000 0
Q ss_pred hhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEc
Q psy10463 355 SDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLF 428 (605)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~ 428 (605)
......... -.....+|+++++||++++++||||+++. .||.|+++|+.++|+++.+.|++.+++..
T Consensus 216 -~~~~~~~~~---g~~~~~sG~~~~~rr~al~~vGg~~~~~i---~ED~dl~~rl~~~G~~i~~~p~a~~~~~~ 282 (444)
T PRK14583 216 -LIKRTQRVY---GQVFTVSGVVAAFRRRALADVGYWSPDMI---TEDIDISWKLQLKHWSVFFEPRGLCWILM 282 (444)
T ss_pred -HHHHHHHHh---CCceEecCceeEEEHHHHHHcCCCCCCcc---cccHHHHHHHHHcCCeEEEeeccEEeeeC
Confidence 000000000 01235678899999999999999999874 79999999999999999999999888764
No 22
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=99.92 E-value=3e-24 Score=231.46 Aligned_cols=218 Identities=17% Similarity=0.230 Sum_probs=159.1
Q ss_pred cCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHH
Q psy10463 196 FLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKAR 275 (605)
Q Consensus 196 ~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~ar 275 (605)
..|.+|||||+||++ +.+.++|+|+.+|+++....|||||||||+|++ .+.++++.+.++ +++++..+.+.|.++|+
T Consensus 47 ~~P~vsVIIP~yNe~-~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T-~~il~~~~~~~~-~v~v~~~~~~~Gka~Al 123 (439)
T TIGR03111 47 KLPDITIIIPVYNSE-DTLFNCIESIYNQTYPIELIDIILANNQSTDDS-FQVFCRAQNEFP-GLSLRYMNSDQGKAKAL 123 (439)
T ss_pred CCCCEEEEEEeCCCh-HHHHHHHHHHHhcCCCCCCeEEEEEECCCChhH-HHHHHHHHHhCC-CeEEEEeCCCCCHHHHH
Confidence 479999999999999 999999999999998876679999999999985 447777777777 78887777889999999
Q ss_pred HHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCCeeEEecccccceeeeeccce-eeEeecC
Q psy10463 276 LLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDVTFAYVRSFELHWGAFNWELH-FRWYTYG 353 (605)
Q Consensus 276 N~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~-~~~~~~~ 353 (605)
|.|++.++||||+++|+|+.++|++|+.+++.+.+++. .++++.+.. +.+..... .+.+.+.+. ..+....
T Consensus 124 N~gl~~s~g~~v~~~DaD~~~~~d~L~~l~~~f~~~~~v~~v~g~~~~-~~~~~~~~------~~~~~~~~~~~~~~~y~ 196 (439)
T TIGR03111 124 NAAIYNSIGKYIIHIDSDGKLHKDAIKNMVTRFENNPDIHAMTGVILT-DKELIEKT------KGRFLKLIRRCEYFEYA 196 (439)
T ss_pred HHHHHHccCCEEEEECCCCCcChHHHHHHHHHHHhCCCeEEEEeEEec-Cchhhhhh------cchhhhHhHHhHHHHHH
Confidence 99999999999999999999999999999999987664 555554421 11111000 000000000 0000000
Q ss_pred chhHhhhccCCCCcc-ccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHH-cCCeEEEecceEEEEEc
Q psy10463 354 SSDAIIKRKDFTEPF-KTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQ-CGGSIEIAPCSHVAHLF 428 (605)
Q Consensus 354 ~~~~~~~~~~~~~~~-~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~-~G~~i~~~p~s~v~H~~ 428 (605)
...... . ...... ....++|+++++||++++++||||+... +||.|+++|+++ .|+++.+.|.+.++|..
T Consensus 197 ~~~l~~-r-~~~s~~~~~~~~sGa~~~~Rr~~l~~vggf~~~~i---~ED~~l~~rl~~~~g~kv~~~~~a~~~~~~ 268 (439)
T TIGR03111 197 QAFLAG-R-NFESQVNSLFTLSGAFSAFRRETILKTQLYNSETV---GEDTDMTFQIRELLDGKVYLCENAIFYVDP 268 (439)
T ss_pred HHHHhh-h-HHHHhcCCeEEEccHHHhhhHHHHHHhCCCCCCCc---CccHHHHHHHHHhcCCeEEECCCCEEEEEC
Confidence 000000 0 000001 1234678888999999999999998763 799999999975 69999999999998865
No 23
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=99.92 E-value=7.1e-24 Score=215.87 Aligned_cols=198 Identities=18% Similarity=0.171 Sum_probs=144.5
Q ss_pred EeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChH-HHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhc-
Q psy10463 205 VFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTRE-FLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQA- 282 (605)
Q Consensus 205 p~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~-~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A- 282 (605)
+|||++.+.|.++|.|+++|+ .|||||||+|+++ ++ +++.+..+ ++++++.++|.|+++|+|.|++.|
T Consensus 1 Vtyn~~~~~l~~~l~sl~~q~-----~~iiVVDN~S~~~~~~----~~~~~~~~-~i~~i~~~~N~G~a~a~N~Gi~~a~ 70 (281)
T TIGR01556 1 VTFNPDLEHLGELITSLPKQV-----DRIIAVDNSPHSDQPL----KNARLRGQ-KIALIHLGDNQGIAGAQNQGLDASF 70 (281)
T ss_pred CccCccHHHHHHHHHHHHhcC-----CEEEEEECcCCCcHhH----HHHhccCC-CeEEEECCCCcchHHHHHHHHHHHH
Confidence 478974489999999999985 4999999998754 33 33344455 899999999999999999999998
Q ss_pred --cCCEEEEecCCcccCcChHHHHHHHHHcC--CcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHh
Q psy10463 283 --EGEILVFLDAHCECTLGWLENLVARVAED--RTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAI 358 (605)
Q Consensus 283 --~gd~i~flD~D~~~~~~~L~~ll~~~~~~--~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~ 358 (605)
.+|||+|||+|+.+++++|+.+++.++++ ..++++|.+. +...-...+.... .+ +.+....
T Consensus 71 ~~~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~-------~~~~~~~----- 135 (281)
T TIGR01556 71 RRGVQGVLLLDQDSRPGNAFLAAQWKLLSAENGQACALGPRFF--DRGTSRRLPAIHL-DG-------LLLRQIS----- 135 (281)
T ss_pred HCCCCEEEEECCCCCCCHHHHHHHHHHHHhcCCceEEECCeEE--cCCCcccCCceee-cc-------cceeeec-----
Confidence 78999999999999999999999999876 4577777652 2211000000000 00 0000000
Q ss_pred hhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEccc
Q psy10463 359 IKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRK 430 (605)
Q Consensus 359 ~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r~ 430 (605)
......+.....+.++.++++|++|+++|+|||.++++ +||+|+|+|+++.|+++.++|.+.+.|....
T Consensus 136 --~~~~~~~~~~~~~~~sg~li~~~~~~~iG~fde~~fi~-~~D~e~~~R~~~~G~~i~~~~~~~~~H~~g~ 204 (281)
T TIGR01556 136 --LDGLTTPQKTSFLISSGCLITREVYQRLGMMDEELFID-HVDTEWSLRAQNYGIPLYIDPDIVLEHRIGD 204 (281)
T ss_pred --ccccCCceeccEEEcCcceeeHHHHHHhCCccHhhccc-chHHHHHHHHHHCCCEEEEeCCEEEEEecCC
Confidence 00011122233333344579999999999999999985 7999999999999999999999999998654
No 24
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=99.92 E-value=1.1e-23 Score=208.60 Aligned_cols=201 Identities=16% Similarity=0.164 Sum_probs=146.1
Q ss_pred EEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhh
Q psy10463 202 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQ 281 (605)
Q Consensus 202 VIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~ 281 (605)
+|||+||+..+.|.+||+|+++| . .|||||||+|++.+ .... ++ ..+ ++++++.+.|.|++.|+|.|++.
T Consensus 1 ~vI~~yn~~~~~l~~~l~sl~~q---~--~~iivvDn~s~~~~-~~~~-~~--~~~-~i~~i~~~~n~G~~~a~N~g~~~ 70 (237)
T cd02526 1 AVVVTYNPDLSKLKELLAALAEQ---V--DKVVVVDNSSGNDI-ELRL-RL--NSE-KIELIHLGENLGIAKALNIGIKA 70 (237)
T ss_pred CEEEEecCCHHHHHHHHHHHhcc---C--CEEEEEeCCCCccH-HHHh-hc--cCC-cEEEEECCCceehHHhhhHHHHH
Confidence 58999999878999999999998 2 69999999998763 2222 11 233 79999999999999999999999
Q ss_pred ccC---CEEEEecCCcccCcChHHHHH---HHHHcCCc-EEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCc
Q psy10463 282 AEG---EILVFLDAHCECTLGWLENLV---ARVAEDRT-RVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGS 354 (605)
Q Consensus 282 A~g---d~i~flD~D~~~~~~~L~~ll---~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~ 354 (605)
|+| |||+|+|+|+.++|+||+.++ ..+.+++. .+++|.+...+....... .....+.. ...
T Consensus 71 a~~~~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~----~~~-- 138 (237)
T cd02526 71 ALENGADYVLLFDQDSVPPPDMVEKLLAYKILSDKNSNIGAVGPRIIDRRTGENSPG------VRKSGYKL----RIQ-- 138 (237)
T ss_pred HHhCCCCEEEEECCCCCcCHhHHHHHHHHHHhhccCCCeEEEeeeEEcCCCCeeccc------eeccCccc----eec--
Confidence 988 999999999999999999995 44544443 566665432222211100 00000000 000
Q ss_pred hhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcccC
Q psy10463 355 SDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRKA 431 (605)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r~~ 431 (605)
..............+++++++|++|+++||||+.+.. ++||+||++|++++|+++.++|.+.+.|.....
T Consensus 139 ------~~~~~~~~~~~~~~~~~~~~rr~~~~~~ggfd~~~~~-~~eD~d~~~r~~~~G~~~~~~~~~~v~h~~~~~ 208 (237)
T cd02526 139 ------KEGEEGLKEVDFLITSGSLISLEALEKVGGFDEDLFI-DYVDTEWCLRARSKGYKIYVVPDAVLKHELGDK 208 (237)
T ss_pred ------ccccCCceEeeeeeccceEEcHHHHHHhCCCCHHHcC-ccchHHHHHHHHHcCCcEEEEcCeEEEecccCc
Confidence 0001111223445567789999999999999999875 589999999999999999999999999976443
No 25
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=99.92 E-value=2.3e-24 Score=228.62 Aligned_cols=213 Identities=21% Similarity=0.224 Sum_probs=152.7
Q ss_pred ccCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCC--CCEEEEeCCC----C
Q psy10463 195 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLS--VPTRVIRSPG----R 268 (605)
Q Consensus 195 ~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~--~~v~~i~~~~----n 268 (605)
+..|+||||||+||++ +.|.+||+|+++|+++.. +|||||||+|+|++ .+.++++.++++ .++++++.+. .
T Consensus 37 ~~~p~VSVIIpa~Ne~-~~L~~~L~sL~~q~yp~~-~eIIVVDd~StD~T-~~i~~~~~~~~~~~~~i~vi~~~~~~~g~ 113 (384)
T TIGR03469 37 EAWPAVVAVVPARNEA-DVIGECVTSLLEQDYPGK-LHVILVDDHSTDGT-ADIARAAARAYGRGDRLTVVSGQPLPPGW 113 (384)
T ss_pred CCCCCEEEEEecCCcH-hHHHHHHHHHHhCCCCCc-eEEEEEeCCCCCcH-HHHHHHHHHhcCCCCcEEEecCCCCCCCC
Confidence 4578999999999999 999999999999998742 79999999999985 557788777665 2688887533 3
Q ss_pred CChHHHHHHHHhhcc-----CCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeec
Q psy10463 269 VGLIKARLLGARQAE-----GEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNW 343 (605)
Q Consensus 269 ~G~~~arN~G~~~A~-----gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~ 343 (605)
.|...|+|.|+++|+ ||+|+|+|+|+.++|+||+.+++.+.+++..++++.........+... . ...+.+
T Consensus 114 ~Gk~~A~n~g~~~A~~~~~~gd~llflDaD~~~~p~~l~~lv~~~~~~~~~~vs~~~~~~~~~~~~~~--~---~~~~~~ 188 (384)
T TIGR03469 114 SGKLWAVSQGIAAARTLAPPADYLLLTDADIAHGPDNLARLVARARAEGLDLVSLMVRLRCESFWEKL--L---IPAFVF 188 (384)
T ss_pred cchHHHHHHHHHHHhccCCCCCEEEEECCCCCCChhHHHHHHHHHHhCCCCEEEecccccCCCHHHHH--H---HHHHHH
Confidence 577889999999999 999999999999999999999999988776666543211111100000 0 000000
Q ss_pred cceeeEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceE
Q psy10463 344 ELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSH 423 (605)
Q Consensus 344 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~ 423 (605)
... ...+. . . ..+.. .......|+++++||++|+++||||+.... ..||++|+.|+++.|+++.+.+...
T Consensus 189 ~~~-~~~~~--~---~-~~~~~--~~~~~~~G~~~lirr~~~~~vGGf~~~~~~-~~ED~~L~~r~~~~G~~v~~~~~~~ 258 (384)
T TIGR03469 189 FFQ-KLYPF--R---W-VNDPR--RRTAAAAGGCILIRREALERIGGIAAIRGA-LIDDCTLAAAVKRSGGRIWLGLAAR 258 (384)
T ss_pred HHH-Hhcch--h---h-hcCCC--ccceeecceEEEEEHHHHHHcCCHHHHhhC-cccHHHHHHHHHHcCCcEEEEecCc
Confidence 000 00000 0 0 00000 123346789999999999999999986554 3799999999999999999876654
Q ss_pred EE
Q psy10463 424 VA 425 (605)
Q Consensus 424 v~ 425 (605)
..
T Consensus 259 ~~ 260 (384)
T TIGR03469 259 TR 260 (384)
T ss_pred eE
Confidence 43
No 26
>PRK10018 putative glycosyl transferase; Provisional
Probab=99.91 E-value=3.2e-23 Score=208.94 Aligned_cols=202 Identities=19% Similarity=0.179 Sum_probs=140.6
Q ss_pred cCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHC-CCCEEEEeCCCCCChHHH
Q psy10463 196 FLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKL-SVPTRVIRSPGRVGLIKA 274 (605)
Q Consensus 196 ~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~-~~~v~~i~~~~n~G~~~a 274 (605)
..|.||||||+||++ ..+.++|.|+++|++++ +|||||||||++. +.++++.+.+ ..++++++++.|.|.+.|
T Consensus 3 ~~p~VSVIip~yN~~-~~l~~~l~Svl~Qt~~~--~EiIVVDDgS~~~---~~~~~~~~~~~~~ri~~i~~~~n~G~~~a 76 (279)
T PRK10018 3 DNPLISIYMPTWNRQ-QLAIRAIKSVLRQDYSN--WEMIIVDDCSTSW---EQLQQYVTALNDPRITYIHNDINSGACAV 76 (279)
T ss_pred CCCEEEEEEEeCCCH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCCH---HHHHHHHHHcCCCCEEEEECCCCCCHHHH
Confidence 368999999999999 99999999999999887 7999999999852 2455665542 238999999999999999
Q ss_pred HHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecC
Q psy10463 275 RLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYG 353 (605)
Q Consensus 275 rN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~ 353 (605)
+|.|++.|+|+||+|||+|+.+.|++|+.+++.+.+... .++..--....+..+ +. .......+..
T Consensus 77 ~N~gi~~a~g~~I~~lDaDD~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~---~~~~~~~p~~ 143 (279)
T PRK10018 77 RNQAIMLAQGEYITGIDDDDEWTPNRLSVFLAHKQQLVTHAFLYANDYVCQGEVY----------SQ---PASLPLYPKS 143 (279)
T ss_pred HHHHHHHcCCCEEEEECCCCCCCccHHHHHHHHHHhCCCccEEEccceeecCccc----------cc---ccccCCCCCC
Confidence 999999999999999999999999999999999876432 222211000000000 00 0000000000
Q ss_pred chhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceE-EEEE
Q psy10463 354 SSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSH-VAHL 427 (605)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~-v~H~ 427 (605)
...... +......|...++.+..+. .++||+.+. ..||+||++|+...|+....+|.+. ++|+
T Consensus 144 ~~~~~~--------~~~~n~ig~~~~~~~~~~~-~~~fd~~~~--~~eDydlwlrl~~~~~~~~~~~~~l~~y~~ 207 (279)
T PRK10018 144 PYSRRL--------FYKRNIIGNQVFTWAWRFK-ECLFDTELK--AAQDYDIFLRMVVEYGEPWKVEEATQILHI 207 (279)
T ss_pred CCCHHH--------HHHhcCcCceeeehhhhhh-hcccCCCCC--ccccHHHHHHHHHhcCceEeeccceEEEEc
Confidence 000000 0011233444445555554 568999987 4899999999999999999999984 4454
No 27
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.91 E-value=1.7e-23 Score=200.99 Aligned_cols=195 Identities=22% Similarity=0.208 Sum_probs=146.0
Q ss_pred eEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHh
Q psy10463 201 SIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGAR 280 (605)
Q Consensus 201 SVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~ 280 (605)
|||||+||++ +.|.++|.|+.+|+.+. +|||||||+|+|++ .+.++++... +.++...++.|.+.|+|.|++
T Consensus 1 sivi~~~n~~-~~l~~~l~sl~~q~~~~--~evivvDd~s~d~~-~~~~~~~~~~----~~~~~~~~~~g~~~a~n~~~~ 72 (202)
T cd06433 1 SIITPTYNQA-ETLEETIDSVLSQTYPN--IEYIVIDGGSTDGT-VDIIKKYEDK----ITYWISEPDKGIYDAMNKGIA 72 (202)
T ss_pred CEEEeccchH-HHHHHHHHHHHhCCCCC--ceEEEEeCCCCccH-HHHHHHhHhh----cEEEEecCCcCHHHHHHHHHH
Confidence 7999999999 99999999999999877 79999999999984 4466665442 445556788999999999999
Q ss_pred hccCCEEEEecCCcccCcChHHHHHHHHHcCC-cEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhh
Q psy10463 281 QAEGEILVFLDAHCECTLGWLENLVARVAEDR-TRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAII 359 (605)
Q Consensus 281 ~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~-~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~ 359 (605)
.|+|+||+|+|+|+.+.++++..++..+...+ ..++++.....+........ . . ......
T Consensus 73 ~a~~~~v~~ld~D~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~~~~~~~--------~--------~-~~~~~~-- 133 (202)
T cd06433 73 LATGDIIGFLNSDDTLLPGALLAVVAAFAEHPEVDVVYGDVLLVDENGRVIGR--------R--------R-PPPFLD-- 133 (202)
T ss_pred HcCCCEEEEeCCCcccCchHHHHHHHHHHhCCCccEEEeeeEEEcCCCCcccC--------C--------C-Ccchhh--
Confidence 99999999999999999999999996665543 45555443322222111000 0 0 000000
Q ss_pred hccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcc
Q psy10463 360 KRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFR 429 (605)
Q Consensus 360 ~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r 429 (605)
........+.+++++++|++|.++|+||+.+.. +||.||++|+++.|+++.+.|...+.|...
T Consensus 134 -----~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~--~~D~~~~~r~~~~g~~~~~~~~~~~~~~~~ 196 (202)
T cd06433 134 -----KFLLYGMPICHQATFFRRSLFEKYGGFDESYRI--AADYDLLLRLLLAGKIFKYLPEVLAAFRLG 196 (202)
T ss_pred -----hHHhhcCcccCcceEEEHHHHHHhCCCchhhCc--hhhHHHHHHHHHcCCceEecchhhhhheec
Confidence 000112245566788999999999999999873 689999999999999999999988776643
No 28
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.91 E-value=4.4e-23 Score=191.76 Aligned_cols=165 Identities=24% Similarity=0.383 Sum_probs=143.1
Q ss_pred EEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhh
Q psy10463 202 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQ 281 (605)
Q Consensus 202 VIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~ 281 (605)
||||+||+. +.+.++++|+.+|+.+. .|||||||||++++.. .+.++ .+ +++++..+.+.|.+.|+|.|++.
T Consensus 1 vii~~~~~~-~~l~~~l~sl~~~~~~~--~~iiivdd~s~~~~~~-~~~~~---~~-~~~~~~~~~~~g~~~a~n~~~~~ 72 (166)
T cd04186 1 IIIVNYNSL-EYLKACLDSLLAQTYPD--FEVIVVDNASTDGSVE-LLREL---FP-EVRLIRNGENLGFGAGNNQGIRE 72 (166)
T ss_pred CEEEecCCH-HHHHHHHHHHHhccCCC--eEEEEEECCCCchHHH-HHHHh---CC-CeEEEecCCCcChHHHhhHHHhh
Confidence 689999998 99999999999998754 7999999999987533 33332 22 69999999999999999999999
Q ss_pred ccCCEEEEecCCcccCcChHHHHHHHHHcCCcE-EEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhhh
Q psy10463 282 AEGEILVFLDAHCECTLGWLENLVARVAEDRTR-VVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIK 360 (605)
Q Consensus 282 A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~-vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~ 360 (605)
+++++++|+|+|+.+.++|++.+++.+.+.+.. ++++.
T Consensus 73 ~~~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~~~~~----------------------------------------- 111 (166)
T cd04186 73 AKGDYVLLLNPDTVVEPGALLELLDAAEQDPDVGIVGPK----------------------------------------- 111 (166)
T ss_pred CCCCEEEEECCCcEECccHHHHHHHHHHhCCCceEEEcc-----------------------------------------
Confidence 999999999999999999999999988776543 33211
Q ss_pred ccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEc
Q psy10463 361 RKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLF 428 (605)
Q Consensus 361 ~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~ 428 (605)
..|++++++|++|.++|+||+.+.. ++||.+|+.|+.+.|+++.+.|++.++|.+
T Consensus 112 ------------~~~~~~~~~~~~~~~~~~~~~~~~~-~~eD~~~~~~~~~~g~~i~~~~~~~~~h~~ 166 (166)
T cd04186 112 ------------VSGAFLLVRREVFEEVGGFDEDFFL-YYEDVDLCLRARLAGYRVLYVPQAVIYHHG 166 (166)
T ss_pred ------------CceeeEeeeHHHHHHcCCCChhhhc-cccHHHHHHHHHHcCCeEEEccceEEEecC
Confidence 5678899999999999999999876 589999999999999999999999999963
No 29
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.91 E-value=2.7e-23 Score=204.23 Aligned_cols=201 Identities=19% Similarity=0.269 Sum_probs=142.5
Q ss_pred EEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHC-CCCEEEEeCC--CCCChHHHHHHH
Q psy10463 202 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKL-SVPTRVIRSP--GRVGLIKARLLG 278 (605)
Q Consensus 202 VIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~-~~~v~~i~~~--~n~G~~~arN~G 278 (605)
||||+||+. +.|.+||+|++.|+++...+|||||||+|+|++.. .++ +.... ..+++++..+ .+.|.+.|+|.|
T Consensus 1 viip~~n~~-~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~-~~~-~~~~~~~~~v~~~~~~~~~~~g~~~a~n~g 77 (229)
T cd04192 1 VVIAARNEA-ENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQ-ILE-FAAAKPNFQLKILNNSRVSISGKKNALTTA 77 (229)
T ss_pred CEEEecCcH-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHH-HHH-HHHhCCCcceEEeeccCcccchhHHHHHHH
Confidence 699999999 99999999999999876557999999999997543 555 33332 2378888776 578999999999
Q ss_pred HhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHh
Q psy10463 279 ARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAI 358 (605)
Q Consensus 279 ~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~ 358 (605)
++.++||||+|+|+|+.+.|+||+.+++.+.+++..++++.......+.+... ...+.+ .........
T Consensus 78 ~~~~~~d~i~~~D~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~------~~~~~~------~~~~~~~~~ 145 (229)
T cd04192 78 IKAAKGDWIVTTDADCVVPSNWLLTFVAFIQKEQIGLVAGPVIYFKGKSLLAK------FQRLDW------LSLLGLIAG 145 (229)
T ss_pred HHHhcCCEEEEECCCcccCHHHHHHHHHHhhcCCCcEEeeeeeecCCccHHHH------HHHHHH------HHHHHHHhh
Confidence 99999999999999999999999999998887766544443221111110000 000000 000000000
Q ss_pred hhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCC-eEEEecceE
Q psy10463 359 IKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGG-SIEIAPCSH 423 (605)
Q Consensus 359 ~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~-~i~~~p~s~ 423 (605)
. .... ......|++++++|++|+++||||+.+.. ..||.|+++|+.++|+ ++.+.+...
T Consensus 146 ~--~~~~---~~~~~~g~~~~~rr~~~~~~ggf~~~~~~-~~eD~~~~~~~~~~g~~~~~~~~~~~ 205 (229)
T cd04192 146 S--FGLG---KPFMCNGANMAYRKEAFFEVGGFEGNDHI-ASGDDELLLAKVASKYPKVAYLKNPE 205 (229)
T ss_pred H--HHhc---CccccccceEEEEHHHHHHhcCCcccccc-ccCCHHHHHHHHHhCCCCEEEeeCcc
Confidence 0 0000 11234688899999999999999988765 4899999999999999 888875433
No 30
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=99.91 E-value=1.6e-23 Score=205.54 Aligned_cols=202 Identities=20% Similarity=0.215 Sum_probs=147.5
Q ss_pred EEEEeechhhHHHHHHHHHHHhcCC-CCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHh
Q psy10463 202 IVIVFHNEAWSALLRTVHSVISRSP-RSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGAR 280 (605)
Q Consensus 202 VIIp~~n~~~~~l~~~l~sl~~q~~-~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~ 280 (605)
||||+||++ ..|.++|+|+.+|+. .. .|||||||+|+|++ .+.++++.++.+ .+++++.+.|.|.+.|+|.|++
T Consensus 1 ViIp~yn~~-~~l~~~l~sl~~q~~~~~--~eiiiVDd~S~d~t-~~~~~~~~~~~~-~i~~~~~~~n~G~~~a~n~g~~ 75 (224)
T cd06442 1 IIIPTYNER-ENIPELIERLDAALKGID--YEIIVVDDNSPDGT-AEIVRELAKEYP-RVRLIVRPGKRGLGSAYIEGFK 75 (224)
T ss_pred CeEeccchh-hhHHHHHHHHHHhhcCCC--eEEEEEeCCCCCCh-HHHHHHHHHhCC-ceEEEecCCCCChHHHHHHHHH
Confidence 699999999 999999999999986 33 79999999999975 447778877777 7899999999999999999999
Q ss_pred hccCCEEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhh
Q psy10463 281 QAEGEILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAII 359 (605)
Q Consensus 281 ~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~ 359 (605)
.|+||+|+|||+|+.+.|+||+.+++.+..++. .++++... ... .. ..|....++..........
T Consensus 76 ~a~gd~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~g~~~~-~~~-~~------------~~~~~~~~~~~~~~~~~~~ 141 (224)
T cd06442 76 AARGDVIVVMDADLSHPPEYIPELLEAQLEGGADLVIGSRYV-EGG-GV------------EGWGLKRKLISRGANLLAR 141 (224)
T ss_pred HcCCCEEEEEECCCCCCHHHHHHHHHHHhcCCCCEEEEeeee-cCC-cc------------CCCcHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999655544 44443321 000 00 1111111000000011111
Q ss_pred hccCCCCccccccccceEEEEeHHHHhHhC-CCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcc
Q psy10463 360 KRKDFTEPFKTPAMAGGLFAIDRAYFFHIG-AYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFR 429 (605)
Q Consensus 360 ~~~~~~~~~~~~~~~G~~~~i~r~~f~~iG-gfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r 429 (605)
.. . ....+...|++++++|++|+++| ++++... .+|+||++|++++|+++..+|...+.|...
T Consensus 142 ~~--~--~~~~~~~~~~~~~~~r~~~~~ig~~~~~~~~---~~~~~l~~~~~~~g~~i~~~p~~~~~~~~g 205 (224)
T cd06442 142 LL--L--GRKVSDPTSGFRAYRREVLEKLIDSLVSKGY---KFQLELLVRARRLGYRIVEVPITFVDREHG 205 (224)
T ss_pred HH--c--CCCCCCCCCccchhhHHHHHHHhhhccCCCc---EEeHHHHHHHHHcCCeEEEeCeEEeccCCC
Confidence 00 0 11233566788999999999998 4443221 357899999999999999999988877654
No 31
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=99.90 E-value=1.4e-23 Score=221.80 Aligned_cols=210 Identities=15% Similarity=0.121 Sum_probs=150.4
Q ss_pred cCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCC-CEEEEeCCCCCCh---
Q psy10463 196 FLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSV-PTRVIRSPGRVGL--- 271 (605)
Q Consensus 196 ~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~-~v~~i~~~~n~G~--- 271 (605)
..|.||||||+||++ +.+.+||+|+++|+++. +|||++||+|+|++ .++++++.+++|. +++++..+.+.|.
T Consensus 39 ~~p~VSViiP~~nee-~~l~~~L~Sl~~q~Yp~--~EIivvdd~s~D~t-~~iv~~~~~~~p~~~i~~v~~~~~~G~~~K 114 (373)
T TIGR03472 39 AWPPVSVLKPLHGDE-PELYENLASFCRQDYPG--FQMLFGVQDPDDPA-LAVVRRLRADFPDADIDLVIDARRHGPNRK 114 (373)
T ss_pred CCCCeEEEEECCCCC-hhHHHHHHHHHhcCCCC--eEEEEEeCCCCCcH-HHHHHHHHHhCCCCceEEEECCCCCCCChH
Confidence 378999999999999 99999999999999987 79999999999875 4588888888772 4788887777774
Q ss_pred HHHHHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEee
Q psy10463 272 IKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYT 351 (605)
Q Consensus 272 ~~arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~ 351 (605)
..+.+.++++|+||+|+|+|+|+.++|+||+.+++.+++...+++++.....+..++. .. .. ...... ..
T Consensus 115 ~~~l~~~~~~a~ge~i~~~DaD~~~~p~~L~~lv~~~~~~~v~~V~~~~~~~~~~~~~--~~----l~--~~~~~~--~~ 184 (373)
T TIGR03472 115 VSNLINMLPHARHDILVIADSDISVGPDYLRQVVAPLADPDVGLVTCLYRGRPVPGFW--SR----LG--AMGINH--NF 184 (373)
T ss_pred HHHHHHHHHhccCCEEEEECCCCCcChhHHHHHHHHhcCCCcceEeccccCCCCCCHH--HH----HH--HHHhhh--hh
Confidence 3445567899999999999999999999999999999765666665432111111110 00 00 000000 00
Q ss_pred cCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEE
Q psy10463 352 YGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAH 426 (605)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H 426 (605)
.+...... . .. ......|++|++||++|+++||||+.... -.||++|+.|++++|+++.+.|.+...+
T Consensus 185 ~~~~~~~~-~---~~--~~~~~~G~~~a~RR~~l~~iGGf~~~~~~-~~ED~~l~~~i~~~G~~v~~~~~~v~~~ 252 (373)
T TIGR03472 185 LPSVMVAR-A---LG--RARFCFGATMALRRATLEAIGGLAALAHH-LADDYWLGELVRALGLRVVLAPVVVDTD 252 (373)
T ss_pred hHHHHHHH-h---cc--CCccccChhhheeHHHHHHcCChHHhccc-chHHHHHHHHHHHcCCeEEecchhhhcC
Confidence 11100000 0 00 01224688999999999999999975543 3799999999999999999998764443
No 32
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=99.90 E-value=3.7e-23 Score=206.00 Aligned_cols=214 Identities=17% Similarity=0.166 Sum_probs=152.8
Q ss_pred cCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCC-CCEEEEeCCCCCChHHH
Q psy10463 196 FLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLS-VPTRVIRSPGRVGLIKA 274 (605)
Q Consensus 196 ~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~-~~v~~i~~~~n~G~~~a 274 (605)
..|++|||||+||++ ..+..++.++.++......+|||||||||+|++ .++++++.+.++ ..++++..+.|.|++.|
T Consensus 7 ~~~~vsVvIp~yne~-~~l~~~l~~l~~~~~~~~~~eiivvDdgS~D~t-~~i~~~~~~~~~~~~v~~~~~~~n~G~~~a 84 (243)
T PLN02726 7 GAMKYSIIVPTYNER-LNIALIVYLIFKALQDVKDFEIIVVDDGSPDGT-QDVVKQLQKVYGEDRILLRPRPGKLGLGTA 84 (243)
T ss_pred CCceEEEEEccCCch-hhHHHHHHHHHHHhccCCCeEEEEEeCCCCCCH-HHHHHHHHHhcCCCcEEEEecCCCCCHHHH
Confidence 468999999999999 899999888876532222379999999999985 457777776654 36888888999999999
Q ss_pred HHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCc
Q psy10463 275 RLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGS 354 (605)
Q Consensus 275 rN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~ 354 (605)
+|.|++.|+|+||+|+|+|+.++|+||+.+++.+.++...++.+.....+. . ..+..|. .+......
T Consensus 85 ~n~g~~~a~g~~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~g~r~~~~~-------~----~~~~~~~--r~~~~~~~ 151 (243)
T PLN02726 85 YIHGLKHASGDFVVIMDADLSHHPKYLPSFIKKQRETGADIVTGTRYVKGG-------G----VHGWDLR--RKLTSRGA 151 (243)
T ss_pred HHHHHHHcCCCEEEEEcCCCCCCHHHHHHHHHHHHhcCCcEEEEccccCCC-------C----cCCccHH--HHHHHHHH
Confidence 999999999999999999999999999999999977665555443211000 0 0000000 00000000
Q ss_pred hhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEccc
Q psy10463 355 SDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRK 430 (605)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r~ 430 (605)
....... .....+...|++++++|+++++++.+.+... | .+|+||++|+...|+++..+|.+.+.|....
T Consensus 152 ~~~~~~~----~~~~~~d~~g~~~~~rr~~~~~i~~~~~~~~-~-~~~~el~~~~~~~g~~i~~vp~~~~~r~~g~ 221 (243)
T PLN02726 152 NVLAQTL----LWPGVSDLTGSFRLYKRSALEDLVSSVVSKG-Y-VFQMEIIVRASRKGYRIEEVPITFVDRVYGE 221 (243)
T ss_pred HHHHHHH----hCCCCCcCCCcccceeHHHHHHHHhhccCCC-c-EEehHHHHHHHHcCCcEEEeCcEEeCCCCCc
Confidence 0000000 0112345678899999999999987655432 2 4689999999999999999999888776543
No 33
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.90 E-value=2e-22 Score=197.29 Aligned_cols=186 Identities=22% Similarity=0.218 Sum_probs=135.8
Q ss_pred ceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHH
Q psy10463 200 SSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGA 279 (605)
Q Consensus 200 vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~ 279 (605)
||||||+||++ ..+.++|.|+++|+++. .|||||||+|+|++.. .+++ . +++++. .+.|.+.|+|.|+
T Consensus 1 vsvii~~~n~~-~~l~~~l~sl~~q~~~~--~evivvdd~s~d~~~~-~~~~-----~-~~~~~~--~~~g~~~a~n~g~ 68 (221)
T cd02522 1 LSIIIPTLNEA-ENLPRLLASLRRLNPLP--LEIIVVDGGSTDGTVA-IARS-----A-GVVVIS--SPKGRARQMNAGA 68 (221)
T ss_pred CEEEEEccCcH-HHHHHHHHHHHhccCCC--cEEEEEeCCCCccHHH-HHhc-----C-CeEEEe--CCcCHHHHHHHHH
Confidence 69999999999 89999999999998754 7999999999998543 3322 2 566665 4578999999999
Q ss_pred hhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhh
Q psy10463 280 RQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAII 359 (605)
Q Consensus 280 ~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~ 359 (605)
+.|+|++++|+|+|+.+.++||++++..+......++++.....+.... +. .....+..
T Consensus 69 ~~a~~~~i~~~D~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~-------------- 127 (221)
T cd02522 69 AAARGDWLLFLHADTRLPPDWDAAIIETLRADGAVAGAFRLRFDDPGPR-LR------LLELGANL-------------- 127 (221)
T ss_pred HhccCCEEEEEcCCCCCChhHHHHHHHHhhcCCcEEEEEEeeecCCccc-hh------hhhhcccc--------------
Confidence 9999999999999999999999999887776655554433322111110 00 00000000
Q ss_pred hccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEE
Q psy10463 360 KRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHL 427 (605)
Q Consensus 360 ~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~ 427 (605)
....... ...+.+++++|++|+++||||+.+ .+||+||++|++++|+++.+ |...+.+.
T Consensus 128 ----~~~~~~~-~~~~~~~~~r~~~~~~~G~fd~~~---~~ED~d~~~r~~~~G~~~~~-~~~~~~~~ 186 (221)
T cd02522 128 ----RSRLFGL-PYGDQGLFIRRELFEELGGFPELP---LMEDVELVRRLRRRGRPALL-PSPVTTSA 186 (221)
T ss_pred ----eecccCC-CcCCceEEEEHHHHHHhCCCCccc---cccHHHHHHHHHhCCCEEEc-Cceeeecc
Confidence 0000111 123457899999999999999998 48999999999999999887 66655543
No 34
>PRK10073 putative glycosyl transferase; Provisional
Probab=99.90 E-value=1.5e-22 Score=209.72 Aligned_cols=214 Identities=18% Similarity=0.151 Sum_probs=148.9
Q ss_pred cCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHH
Q psy10463 196 FLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKAR 275 (605)
Q Consensus 196 ~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~ar 275 (605)
..|.||||||+||++ +.|.+||+|+++|++++ +|||||||||+|++ .++++++.++.+ ++++++. +|.|.+.|+
T Consensus 4 ~~p~vSVIIP~yN~~-~~L~~~l~Sl~~Qt~~~--~EIIiVdDgStD~t-~~i~~~~~~~~~-~i~vi~~-~n~G~~~ar 77 (328)
T PRK10073 4 STPKLSIIIPLYNAG-KDFRAFMESLIAQTWTA--LEIIIVNDGSTDNS-VEIAKHYAENYP-HVRLLHQ-ANAGVSVAR 77 (328)
T ss_pred CCCeEEEEEeccCCH-HHHHHHHHHHHhCCCCC--eEEEEEeCCCCccH-HHHHHHHHhhCC-CEEEEEC-CCCChHHHH
Confidence 368999999999999 99999999999999876 79999999999985 458888888887 8999975 589999999
Q ss_pred HHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCch
Q psy10463 276 LLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSS 355 (605)
Q Consensus 276 N~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~ 355 (605)
|.|++.|+|+||+|+|+|+.+.|++++.+++.+.++...++.........+.-....... . . .+.......+..
T Consensus 78 N~gl~~a~g~yi~flD~DD~~~p~~l~~l~~~~~~~~~dvv~~~~~~~~~~~~~~~~~~~---~--~-~~~~~~~~~~~~ 151 (328)
T PRK10073 78 NTGLAVATGKYVAFPDADDVVYPTMYETLMTMALEDDLDVAQCNADWCFRDTGETWQSIP---S--D-RLRSTGVLSGPD 151 (328)
T ss_pred HHHHHhCCCCEEEEECCCCccChhHHHHHHHHHHhCCCCEEEEccEEEEeCCCccccccc---c--c-cccccceechHH
Confidence 999999999999999999999999999999998776544433221111111000000000 0 0 000000000011
Q ss_pred hHhhhccCCCCccccccccceEEEEeHHHHhHhCC-CCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcc
Q psy10463 356 DAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGA-YDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFR 429 (605)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGg-fDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r 429 (605)
........ ..+ +. ...+-++||+++++.|. |++++. .||+++++++...+.++.++|.....+..+
T Consensus 152 ~l~~~l~~--~~~--~~-~~~~~l~Rr~~l~~~~~~f~~~~~---~eD~~~~~~~~~~~~~v~~~~~~ly~Yr~~ 218 (328)
T PRK10073 152 WLRMALSS--RRW--TH-VVWLGVYRRDFIVKNNIKFEPGLH---HQDIPWTTEVMFNALRVRYTEQSLYKYYLH 218 (328)
T ss_pred HHHHHHhh--CCC--Cc-cHhHHHHHHHHHHHcCCccCCCCE---eccHHHHHHHHHHCCEEEEECCCEEEEEec
Confidence 11100000 000 00 11123689999999884 777764 699999999999999999999976655443
No 35
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=99.90 E-value=1.1e-22 Score=203.30 Aligned_cols=207 Identities=21% Similarity=0.234 Sum_probs=156.4
Q ss_pred cccCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHH
Q psy10463 194 EEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIK 273 (605)
Q Consensus 194 ~~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~ 273 (605)
....|++|||||+||++ +.|.++|.|+++|+++...+|||||||+|+|++ .+.++++.+. +++++..+.+.|.+.
T Consensus 25 ~~~~~~isVvip~~n~~-~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t-~~~~~~~~~~---~v~~i~~~~~~g~~~ 99 (251)
T cd06439 25 PAYLPTVTIIIPAYNEE-AVIEAKLENLLALDYPRDRLEIIVVSDGSTDGT-AEIAREYADK---GVKLLRFPERRGKAA 99 (251)
T ss_pred CCCCCEEEEEEecCCcH-HHHHHHHHHHHhCcCCCCcEEEEEEECCCCccH-HHHHHHHhhC---cEEEEEcCCCCChHH
Confidence 34578999999999999 999999999999987765579999999999974 4466666543 599999999999999
Q ss_pred HHHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecC
Q psy10463 274 ARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYG 353 (605)
Q Consensus 274 arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~ 353 (605)
|+|.|++.|+||||+|+|+|+.++++||+.+++.+.++...++++.....++.. ... .....|.+ .
T Consensus 100 a~n~gi~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~--~~~-----~~~~~~~~-------~ 165 (251)
T cd06439 100 ALNRALALATGEIVVFTDANALLDPDALRLLVRHFADPSVGAVSGELVIVDGGG--SGS-----GEGLYWKY-------E 165 (251)
T ss_pred HHHHHHHHcCCCEEEEEccccCcCHHHHHHHHHHhcCCCccEEEeEEEecCCcc--cch-----hHHHHHHH-------H
Confidence 999999999999999999999999999999999998666677777664444332 000 00000100 0
Q ss_pred chhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcc
Q psy10463 354 SSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFR 429 (605)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r 429 (605)
...... .. .........|++++++|+.|+ +|++.. ..||.+|+.|+...|+++.+.|.+.++|...
T Consensus 166 ~~~~~~-~~---~~~~~~~~~g~~~~~rr~~~~---~~~~~~---~~eD~~l~~~~~~~G~~~~~~~~~~~~~~~~ 231 (251)
T cd06439 166 NWLKRA-ES---RLGSTVGANGAIYAIRRELFR---PLPADT---INDDFVLPLRIARQGYRVVYEPDAVAYEEVA 231 (251)
T ss_pred HHHHHH-HH---hcCCeeeecchHHHhHHHHhc---CCCccc---chhHHHHHHHHHHcCCeEEeccccEEEEeCc
Confidence 000000 00 011123466778889999998 665543 3799999999999999999999999988763
No 36
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.89 E-value=1e-22 Score=197.99 Aligned_cols=202 Identities=15% Similarity=0.146 Sum_probs=149.3
Q ss_pred eEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHh
Q psy10463 201 SIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGAR 280 (605)
Q Consensus 201 SVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~ 280 (605)
|||||+||++ ..|.++|.|+++|+++. +|||||||||+|+ +.+.++++.++++..++++..+.+.|.++++|.|++
T Consensus 1 sIvIp~yn~~-~~l~~~l~sl~~q~~~~--~eiiVvddgS~d~-t~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~n~g~~ 76 (214)
T cd04196 1 AVLMATYNGE-KYLREQLDSILAQTYKN--DELIISDDGSTDG-TVEIIKEYIDKDPFIIILIRNGKNLGVARNFESLLQ 76 (214)
T ss_pred CEEEEecCcH-HHHHHHHHHHHhCcCCC--eEEEEEeCCCCCC-cHHHHHHHHhcCCceEEEEeCCCCccHHHHHHHHHH
Confidence 7999999999 99999999999999875 7999999999997 555788888877656888999999999999999999
Q ss_pred hccCCEEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhh
Q psy10463 281 QAEGEILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAII 359 (605)
Q Consensus 281 ~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~ 359 (605)
.|+|+||+|+|+|+.+.|++|+.+++.+..++. .++++.....+.+..... ...+ ....+ .. ....
T Consensus 77 ~~~g~~v~~ld~Dd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~-~~~~~--~~-~~~~--- 143 (214)
T cd04196 77 AADGDYVFFCDQDDIWLPDKLERLLKAFLKDDKPLLVYSDLELVDENGNPIG------ESFF-EYQKI--KP-GTSF--- 143 (214)
T ss_pred hCCCCEEEEECCCcccChhHHHHHHHHHhcCCCceEEecCcEEECCCCCCcc------cccc-ccccc--CC-ccCH---
Confidence 999999999999999999999999999655443 454443222222110000 0000 00000 00 0000
Q ss_pred hccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEE
Q psy10463 360 KRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHL 427 (605)
Q Consensus 360 ~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~ 427 (605)
........+.|++++++|++++++|+|++.+. ..||.++.+++.. |+++.++|...+.|.
T Consensus 144 -----~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~--~~~D~~~~~~~~~-~~~~~~~~~~~~~~r 203 (214)
T cd04196 144 -----NNLLFQNVVTGCTMAFNRELLELALPFPDADV--IMHDWWLALLASA-FGKVVFLDEPLILYR 203 (214)
T ss_pred -----HHHHHhCccCCceeeEEHHHHHhhcccccccc--ccchHHHHHHHHH-cCceEEcchhHHHHh
Confidence 00111234567889999999999999999863 3799999998877 779999998876543
No 37
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=99.89 E-value=3e-22 Score=225.43 Aligned_cols=211 Identities=17% Similarity=0.181 Sum_probs=149.3
Q ss_pred ccCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCC-ChHH
Q psy10463 195 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRV-GLIK 273 (605)
Q Consensus 195 ~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~-G~~~ 273 (605)
...|+|||+||+|||+.+.+.+++.+++++++|...+||+||||||+|++ . +++++. ++++++.++|. |.++
T Consensus 257 ~~~P~VsViIPtYNE~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t-~----~la~~~--~v~yI~R~~n~~gKAG 329 (852)
T PRK11498 257 SLWPTVDIFVPTYNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEF-R----QFAQEV--GVKYIARPTHEHAKAG 329 (852)
T ss_pred CCCCcEEEEEecCCCcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChHH-H----HHHHHC--CcEEEEeCCCCcchHH
Confidence 34689999999999984456789999999999876689999999999974 3 334443 58888776554 5789
Q ss_pred HHHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCCeeEEecccccceeeeeccceeeEeec
Q psy10463 274 ARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTY 352 (605)
Q Consensus 274 arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~ 352 (605)
+.|.|+++++||||+++|+|+.+.+++|+.++..+.+++. ++|.+.....+++.+... .+.+.. ...
T Consensus 330 nLN~aL~~a~GEyIavlDAD~ip~pdfL~~~V~~f~~dP~VglVQtp~~f~n~dp~~rn------l~~~~~------~~~ 397 (852)
T PRK11498 330 NINNALKYAKGEFVAIFDCDHVPTRSFLQMTMGWFLKDKKLAMMQTPHHFFSPDPFERN------LGRFRK------TPN 397 (852)
T ss_pred HHHHHHHhCCCCEEEEECCCCCCChHHHHHHHHHHHhCCCeEEEEcceeccCCchHHHh------hHHHhh------ccc
Confidence 9999999999999999999999999999999998766654 555433222222211100 000000 000
Q ss_pred CchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEE
Q psy10463 353 GSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHL 427 (605)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~ 427 (605)
.+..................+.|+++++||++++++||||++.. .||.|+++|+.+.|+++.++|...+...
T Consensus 398 e~~~fy~~iq~g~~~~~a~~~~Gs~aviRReaLeeVGGfd~~ti---tED~dlslRL~~~Gyrv~yl~~~~a~gl 469 (852)
T PRK11498 398 EGTLFYGLVQDGNDMWDATFFCGSCAVIRRKPLDEIGGIAVETV---TEDAHTSLRLHRRGYTSAYMRIPQAAGL 469 (852)
T ss_pred chhHHHHHHHhHHHhhcccccccceeeeEHHHHHHhcCCCCCcc---CccHHHHHHHHHcCCEEEEEeccceeEE
Confidence 00000000000001122345678999999999999999999852 7999999999999999999987766543
No 38
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=99.88 E-value=6.4e-22 Score=224.45 Aligned_cols=215 Identities=20% Similarity=0.204 Sum_probs=152.1
Q ss_pred ccCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHH-------------HHHHHHHHHHCCCCEE
Q psy10463 195 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFL-------------KSSLDEYVAKLSVPTR 261 (605)
Q Consensus 195 ~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~-------------~~~l~~~~~~~~~~v~ 261 (605)
+..|+||||||+|||+.+.+.+++.+++++++|...+||+||||||+|++. .+.+++++++. +++
T Consensus 128 ~~~P~VsViIP~yNE~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~~~~~~~~~~~~l~~~~--~v~ 205 (713)
T TIGR03030 128 EEWPTVDVFIPTYNEDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQAEAAQRREELKEFCRKL--GVN 205 (713)
T ss_pred ccCCeeEEEEcCCCCCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhhhhhhhhhHHHHHHHHHHc--CcE
Confidence 457899999999999933456799999999998655899999999998752 23456666655 588
Q ss_pred EEeCCCCC-ChHHHHHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCc-EEEe-eeEeeecCCeeEEecccccce
Q psy10463 262 VIRSPGRV-GLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRT-RVVC-PVIDIISDVTFAYVRSFELHW 338 (605)
Q Consensus 262 ~i~~~~n~-G~~~arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~-p~i~~i~~~~~~~~~~~~~~~ 338 (605)
+++.++|. +.+++.|.|+++++||||+++|+|+.+.|++|++++..+.+++. +++. |.. ..+++.+... .
T Consensus 206 yi~r~~n~~~KAgnLN~al~~a~gd~Il~lDAD~v~~pd~L~~~v~~f~~dp~v~~Vqtp~~-f~~p~~~~~n------l 278 (713)
T TIGR03030 206 YITRPRNVHAKAGNINNALKHTDGELILIFDADHVPTRDFLQRTVGWFVEDPKLFLVQTPHF-FVSPDPIERN------L 278 (713)
T ss_pred EEECCCCCCCChHHHHHHHHhcCCCEEEEECCCCCcChhHHHHHHHHHHhCCCEEEEeCCee-ccCCCHHhhh------h
Confidence 88877765 56889999999999999999999999999999999999977655 4443 322 1222211100 0
Q ss_pred eeeeccceeeEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEE
Q psy10463 339 GAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEI 418 (605)
Q Consensus 339 g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~ 418 (605)
+.+. ......................+.+.|+++++||++++++||||++.. .||+++++|+..+|+++.+
T Consensus 279 ~~~~------~~~~e~~~f~~~i~~g~~~~~~~~~~Gs~~~iRR~al~~iGGf~~~~v---tED~~l~~rL~~~G~~~~y 349 (713)
T TIGR03030 279 GTFR------RMPNENELFYGLIQDGNDFWNAAFFCGSAAVLRREALDEIGGIAGETV---TEDAETALKLHRRGWNSAY 349 (713)
T ss_pred HHHH------HhhhHHHHHHHHHHHHHhhhCCeeecCceeEEEHHHHHHcCCCCCCCc---CcHHHHHHHHHHcCCeEEE
Confidence 0000 000000000000000001112334678899999999999999998653 7999999999999999999
Q ss_pred ecceEEEEE
Q psy10463 419 APCSHVAHL 427 (605)
Q Consensus 419 ~p~s~v~H~ 427 (605)
.|.+.+.+.
T Consensus 350 ~~~~~~~g~ 358 (713)
T TIGR03030 350 LDRPLIAGL 358 (713)
T ss_pred ecccccccc
Confidence 999887654
No 39
>PRK10063 putative glycosyl transferase; Provisional
Probab=99.88 E-value=3.7e-21 Score=191.51 Aligned_cols=191 Identities=13% Similarity=0.072 Sum_probs=134.1
Q ss_pred CcceEEEEeechhhHHHHHHHHHHHhcC---CCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHH
Q psy10463 198 PKSSIVIVFHNEAWSALLRTVHSVISRS---PRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKA 274 (605)
Q Consensus 198 p~vSVIIp~~n~~~~~l~~~l~sl~~q~---~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~a 274 (605)
|++|||||+||++ +.|.++|+|+.++. +.. +|||||||||+|++ .++++++.... +++++..+ +.|++.|
T Consensus 1 ~~vSVIi~~yN~~-~~l~~~l~sl~~~~~~~~~~--~EiIVvDdgStD~t-~~i~~~~~~~~--~i~~i~~~-~~G~~~A 73 (248)
T PRK10063 1 MLLSVITVAFRNL-EGIVKTHASLRHLAQDPGIS--FEWIVVDGGSNDGT-REFLENLNGIF--NLRFVSEP-DNGIYDA 73 (248)
T ss_pred CeEEEEEEeCCCH-HHHHHHHHHHHHHHhCCCCC--EEEEEEECcCcccH-HHHHHHhcccC--CEEEEECC-CCCHHHH
Confidence 6899999999999 99999999998642 333 79999999999985 44666664332 58888765 6799999
Q ss_pred HHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecC
Q psy10463 275 RLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYG 353 (605)
Q Consensus 275 rN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~ 353 (605)
+|.|++.|+||||+|||+|+.+.|+.++.+......++. .+++..+... .+..... . ...+
T Consensus 74 ~N~Gi~~a~g~~v~~ld~DD~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~-~~~~~~~------~-----------~~~~ 135 (248)
T PRK10063 74 MNKGIAMAQGRFALFLNSGDIFHQDAANFVRQLKMQKDNAMIIGDALLDF-GDGHKIK------R-----------SAKP 135 (248)
T ss_pred HHHHHHHcCCCEEEEEeCCcccCcCHHHHHHHHHhCCCCeEEEeeeEEEc-CCCcEEE------E-----------ccCC
Confidence 999999999999999999999999987654444334444 3444332111 1100000 0 0000
Q ss_pred chhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEE
Q psy10463 354 SSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAH 426 (605)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H 426 (605)
.... . ...+ +.+..++++|+.+. .|+||+.+. ..||+||++|+...|.++..+|......
T Consensus 136 ~~~~-~--------~~~~-~~~~~~~~~~~~~~-~~~fd~~~~--~~~Dydl~lrl~~~g~~~~~v~~~l~~y 195 (248)
T PRK10063 136 GWYI-Y--------HSLP-ASHQAIFFPVSGLK-KWRYDLQYK--VSSDYALAARLYKAGYAFKKLNGLVSEF 195 (248)
T ss_pred hhHH-h--------cCCC-CCCcEEEEEHHHHh-cCCCCcccc--hHHhHHHHHHHHHcCCcEEEcCceeEEE
Confidence 0000 0 0011 23345678999886 478999886 3799999999999999999999887764
No 40
>KOG3737|consensus
Probab=99.87 E-value=1.1e-21 Score=193.16 Aligned_cols=386 Identities=23% Similarity=0.292 Sum_probs=204.2
Q ss_pred eEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhhhccCceEEEecCccccccccccccCCcceEE
Q psy10463 124 EILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLVFNEEFLPKSSIV 203 (605)
Q Consensus 124 EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~~a~g~~i~~lD~d~~~~~~~~~~~~p~vSVI 203 (605)
|||+|||.|+.+.+++.|++|+..++..|+|++++++.|+..||.+|+..|+|++++|||++||+...|+++.+..++
T Consensus 189 eivlvDDfSdKehLkekLDeYv~~fnGlVkV~Rne~REGLI~aRSiGA~~atGeV~ifLDAHCEVntNWlpPLlAPI~-- 266 (603)
T KOG3737|consen 189 EIVLVDDFSDKEHLKEKLDEYVKLFNGLVKVFRNERREGLIQARSIGAQKATGEVLIFLDAHCEVNTNWLPPLLAPIS-- 266 (603)
T ss_pred eEEEeccCCccHHHHHHHHHHHHHhcCEEEEEecchhhhhhhhhccchhhccccEEEEEecceeeecccccccccccc--
Confidence 899999999999999999999999999999999999999999999999999999999999999999999987765443
Q ss_pred EEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhcc
Q psy10463 204 IVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAE 283 (605)
Q Consensus 204 Ip~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~ 283 (605)
.|+. -...-.|..| . ...+|++-|-.+..+ ....+.+ + |
T Consensus 267 ---rdRt-vmTVP~IDgI---d--~n~~EyrpvyG~dn~-h~rGife-W-------------------------g----- 305 (603)
T KOG3737|consen 267 ---RDRT-VMTVPLIDGI---D--GNTYEYRPVYGGDND-HARGIFE-W-------------------------G----- 305 (603)
T ss_pred ---cCce-EEEEeeeeee---c--CCceEEeeccCCcch-hhcchhh-h-------------------------h-----
Confidence 0110 0000000000 0 011454444222111 1111100 0 0
Q ss_pred CCEEEEecCCcccCcChHHHHHHHHHcC---C--c-EEEeeeEeeecCCeeE----EecccccceeeeeccceeeEeecC
Q psy10463 284 GEILVFLDAHCECTLGWLENLVARVAED---R--T-RVVCPVIDIISDVTFA----YVRSFELHWGAFNWELHFRWYTYG 353 (605)
Q Consensus 284 gd~i~flD~D~~~~~~~L~~ll~~~~~~---~--~-~vv~p~i~~i~~~~~~----~~~~~~~~~g~~~~~l~~~~~~~~ 353 (605)
......-|.+--.+...+ + . .-+ +-+..|+...|. |..+..+ ||+.+++++|+.+.|+
T Consensus 306 ----------mLyKe~~~t~rE~r~RkhnsePyRSPthA-GGLfAInRe~F~ELG~YDpgLqi-WGGEnfElSfKIWQCG 373 (603)
T KOG3737|consen 306 ----------MLYKEVPLTPREKRLRKHNSEPYRSPTHA-GGLFAINREFFFELGLYDPGLQI-WGGENFELSFKIWQCG 373 (603)
T ss_pred ----------heeccCCCCHHHHHhhhccCCCCCCcccc-cceeeehHHHHHHhccCCCccee-ecCcceeEEEEEEeeC
Confidence 000001111111111111 0 0 111 112344554442 4444444 9999999999999999
Q ss_pred chhHhhhccCCCCcccccc-ccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcccCC
Q psy10463 354 SSDAIIKRKDFTEPFKTPA-MAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRKAS 432 (605)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~-~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r~~~ 432 (605)
+.....++......+++-. ..++-+.+. +|+--.. -++--....|...++-++. -.....
T Consensus 374 G~i~fVPCSrVGHvYR~~mpy~fgk~~~k------~~~p~i~------iNy~RVvetW~Ddyk~Yfy------treP~a- 434 (603)
T KOG3737|consen 374 GKILFVPCSRVGHVYRSLMPYQFGKPPIK------VGSPPIL------INYVRVVETWWDDYKDYFY------TREPEA- 434 (603)
T ss_pred CEEEEEEccccchhhhccccccCCCCccc------cCCCceE------eehhhHHHHHHHhhhhhee------ecChhh-
Confidence 8766554444444443210 001111100 0000000 0000011111111111110 000001
Q ss_pred CCCCCCCcchh--hhhhHHHHHHHH-hhhhHhhhhccCchhhccCCccchHHHHHHhhhcCCcccc----cccccccCCC
Q psy10463 433 PYSFPGGVSEV--LYGNLARVALVW-MDEWAEFYFKFNPEAEKQRDKQAVRSRLELRKQLKCHSFK----WYLTHVWPHH 505 (605)
Q Consensus 433 ~~~~~~~~~~~--~~rn~~r~a~~W-~d~~k~~~~~~~p~~~~~~~~g~~~~r~~lr~~l~ck~f~----wyl~~v~p~~ 505 (605)
.+.-+++.+.. +.........+| |++-..-.+..+|-.-+....|.+..-. .-.|-+-- -=.-..-|||
T Consensus 435 ~~l~~GDISeqlalr~~lnCkSFkWfMe~iAYDv~~~yP~lP~N~~WGE~R~~a----t~~ClDsMG~~p~g~mglt~CH 510 (603)
T KOG3737|consen 435 QALPYGDISEQLALREDLNCKSFKWFMEEIAYDVTSHYPLLPKNVDWGEIRGFA----TAYCLDSMGKTPGGFMGLTPCH 510 (603)
T ss_pred ccCCcccHHHHHHhHhhcCCchhHHHHHHHHHHHHhcCCCCCCCCcchhccCcc----cchhHHhcCCCCCCcccccccc
Confidence 11112333222 222222333445 3343333455556334566677662211 11231100 0011245788
Q ss_pred cCCCCCc----cccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeec-CCCeeeecCCCC
Q psy10463 506 FLPMDDK----FFGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT-DESVCLDVPEYE 580 (605)
Q Consensus 506 ~~p~~~~----~~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~-~~~~CLd~~~~~ 580 (605)
.++.++. ..|++- +...||.+. |..+.+--| .-+.-+-.|.|......+.+ .+++|++....
T Consensus 511 g~GgNQL~RlN~agQl~--qge~CltAd---------g~~i~~~hC-~lgtv~g~WqY~~~tk~~~H~~~~kC~~~se~- 577 (603)
T KOG3737|consen 511 GMGGNQLFRLNEAGQLM--QGEQCLTAD---------GSKIMITHC-NLGTVKGEWQYFKNTKRFTHIPSGKCLDRSEV- 577 (603)
T ss_pred CCCCceEEEeccccchh--ccceeeecC---------CceEEEEEe-ecccccCceehhhcchheeeccccccccccch-
Confidence 7777653 235554 368999953 567889999 44355667988744555554 56799998763
Q ss_pred CCCCCceEEEeCCCCC-CcceEeC
Q psy10463 581 NDISPRVRILACSGFN-RQRWTYD 603 (605)
Q Consensus 581 ~~~g~~v~l~~C~~~~-~Q~W~~~ 603 (605)
+.+|.+..|+.++ .|+|.+.
T Consensus 578 ---~~qv~l~~Cd~~~~~Qkw~~k 598 (603)
T KOG3737|consen 578 ---LHQVFLSNCDSSKTTQKWEMK 598 (603)
T ss_pred ---hheeeecccCCCchhheeehh
Confidence 4699999999888 9999875
No 41
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=99.86 E-value=1.2e-21 Score=193.64 Aligned_cols=205 Identities=16% Similarity=0.131 Sum_probs=145.5
Q ss_pred cceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHH
Q psy10463 199 KSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLG 278 (605)
Q Consensus 199 ~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G 278 (605)
.||||||+||++.+.+.+||+|+.+|+ . .|||||||+|+|++.. .+.+ ....+ .++++. ..+.|.+.|+|.|
T Consensus 1 ~isVvIp~~ne~~~~l~~~l~sl~~q~--~--~eiivvdd~s~d~~~~-~l~~-~~~~~-~~~v~~-~~~~g~~~a~n~g 72 (235)
T cd06434 1 DVTVIIPVYDEDPDVFRECLRSILRQK--P--LEIIVVTDGDDEPYLS-ILSQ-TVKYG-GIFVIT-VPHPGKRRALAEG 72 (235)
T ss_pred CeEEEEeecCCChHHHHHHHHHHHhCC--C--CEEEEEeCCCChHHHH-HHHh-hccCC-cEEEEe-cCCCChHHHHHHH
Confidence 479999999998789999999999998 2 6999999999998544 3322 22333 566664 6679999999999
Q ss_pred HhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHh
Q psy10463 279 ARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAI 358 (605)
Q Consensus 279 ~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~ 358 (605)
++.|+||||+|+|+|+.+.|+||+.+++.+..+..+++++.+...+..... ... .+...+ ....... .
T Consensus 73 ~~~a~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~v~~v~~~~~~~~~~~~~----~~~-~~~~~~------~~~~~~~-~ 140 (235)
T cd06434 73 IRHVTTDIVVLLDSDTVWPPNALPEMLKPFEDPKVGGVGTNQRILRPRDSK----WSF-LAAEYL------ERRNEEI-R 140 (235)
T ss_pred HHHhCCCEEEEECCCceeChhHHHHHHHhccCCCEeEEcCceEeecCcccH----HHH-HHHHHH------HHHHHHH-H
Confidence 999999999999999999999999999999865667777765433331000 000 000000 0000000 0
Q ss_pred hhccCCCCccccccccceEEEEeHHHHhHhCCCCccc--------ccccchhhHHHHHHHHcCCeEEEecceEEEEE
Q psy10463 359 IKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEM--------QVWGGENLEMSFRVWQCGGSIEIAPCSHVAHL 427 (605)
Q Consensus 359 ~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~--------~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~ 427 (605)
. ... ..-..+.+.|++++++|++++++++ ++.+ ....+||.+|+.|+.+.|+++.+.|.+.++|.
T Consensus 141 ~-~~~--~~~~~~~~~G~~~~~rr~~l~~~~~-~~~~~~~~~~~~~~~~~eD~~l~~~~~~~g~~~~~~~~~~~~~~ 213 (235)
T cd06434 141 A-AMS--YDGGVPCLSGRTAAYRTEILKDFLF-LEEFTNETFMGRRLNAGDDRFLTRYVLSHGYKTVYQYTSEAYTE 213 (235)
T ss_pred H-HHh--hCCCEEEccCcHHHHHHHHHhhhhh-HHHhhhhhhcCCCCCcCchHHHHHHHHHCCCeEEEecCCeEEEE
Confidence 0 000 1112345678889999999998754 3333 12257999999999999999999999999987
No 42
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=99.85 E-value=1.2e-20 Score=175.13 Aligned_cols=169 Identities=31% Similarity=0.423 Sum_probs=120.6
Q ss_pred eEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHh
Q psy10463 201 SIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGAR 280 (605)
Q Consensus 201 SVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~ 280 (605)
|||||+||+. +.|.++|.|+++|+... .|||||||+|+++ +.+.++++.+ ...++++++.+.|.|++.++|.|++
T Consensus 1 Svvip~~n~~-~~l~~~l~sl~~q~~~~--~eiivvdd~s~d~-~~~~~~~~~~-~~~~i~~i~~~~n~g~~~~~n~~~~ 75 (169)
T PF00535_consen 1 SVVIPTYNEA-EYLERTLESLLKQTDPD--FEIIVVDDGSTDE-TEEILEEYAE-SDPNIRYIRNPENLGFSAARNRGIK 75 (169)
T ss_dssp EEEEEESS-T-TTHHHHHHHHHHHSGCE--EEEEEEECS-SSS-HHHHHHHHHC-CSTTEEEEEHCCCSHHHHHHHHHHH
T ss_pred CEEEEeeCCH-HHHHHHHHHHhhccCCC--EEEEEeccccccc-cccccccccc-ccccccccccccccccccccccccc
Confidence 7999999998 99999999999996554 7999999999887 4557777766 3348999999999999999999999
Q ss_pred hccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhhh
Q psy10463 281 QAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIK 360 (605)
Q Consensus 281 ~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~ 360 (605)
+|+++|++|+|+|+++.++||+.+++.+.+++..++.+.....+............ ..+...... ..
T Consensus 76 ~a~~~~i~~ld~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~-~~-- 142 (169)
T PF00535_consen 76 HAKGEYILFLDDDDIISPDWLEELVEALEKNPPDVVIGSVIYIDDDNRYPDRRLRF----------SFWNRFERK-IF-- 142 (169)
T ss_dssp H--SSEEEEEETTEEE-TTHHHHHHHHHHHCTTEEEEEEEEEEECTTETEECCCTS----------EEEECCHCH-HH--
T ss_pred ccceeEEEEeCCCceEcHHHHHHHHHHHHhCCCcEEEEEEEEecCCccccccccch----------hhhhhhhhH-HH--
Confidence 99999999999999999999999999999977655554443333332222111110 001111111 11
Q ss_pred ccCCCCccccccccceEEEEeHHHHhHhC
Q psy10463 361 RKDFTEPFKTPAMAGGLFAIDRAYFFHIG 389 (605)
Q Consensus 361 ~~~~~~~~~~~~~~G~~~~i~r~~f~~iG 389 (605)
........+...+++++++|++|+++|
T Consensus 143 --~~~~~~~~~~~~~~~~~~rr~~~~~~~ 169 (169)
T PF00535_consen 143 --NNIRFWKISFFIGSCALFRRSVFEEIG 169 (169)
T ss_dssp --HTTHSTTSSEESSSCEEEEEHHHHHCH
T ss_pred --HhhhcCCcccccccEEEEEHHHHHhhC
Confidence 112223355678889999999999986
No 43
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=99.84 E-value=3.3e-20 Score=180.54 Aligned_cols=200 Identities=19% Similarity=0.173 Sum_probs=138.6
Q ss_pred EEEEeechhhHHHHHHHHHHHhcCC--CCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHH
Q psy10463 202 IVIVFHNEAWSALLRTVHSVISRSP--RSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGA 279 (605)
Q Consensus 202 VIIp~~n~~~~~l~~~l~sl~~q~~--~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~ 279 (605)
||||+||++ +.|.++|+++++++. +...+|||||||||+|+ +.+.++++.++++..+++++++.|.|.++|+|.|+
T Consensus 1 iiip~yN~~-~~l~~~l~~l~~~~~~~~~~~~eiivvdd~S~D~-t~~~~~~~~~~~~~~i~~i~~~~n~G~~~a~~~g~ 78 (211)
T cd04188 1 VVIPAYNEE-KRLPPTLEEAVEYLEERPSFSYEIIVVDDGSKDG-TAEVARKLARKNPALIRVLTLPKNRGKGGAVRAGM 78 (211)
T ss_pred CEEcccChH-HHHHHHHHHHHHHHhccCCCCEEEEEEeCCCCCc-hHHHHHHHHHhCCCcEEEEEcccCCCcHHHHHHHH
Confidence 699999999 999999999999864 11238999999999998 45578888887774469999999999999999999
Q ss_pred hhccCCEEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHh
Q psy10463 280 RQAEGEILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAI 358 (605)
Q Consensus 280 ~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~ 358 (605)
+.|+||||+|+|+|+.++|++++.+++.+.+++. .++++.... ...... ...|...+ .........
T Consensus 79 ~~a~gd~i~~ld~D~~~~~~~l~~l~~~~~~~~~~~v~g~r~~~-~~~~~~----------~~~~~~~~--~~~~~~~~~ 145 (211)
T cd04188 79 LAARGDYILFADADLATPFEELEKLEEALKTSGYDIAIGSRAHL-ASAAVV----------KRSWLRNL--LGRGFNFLV 145 (211)
T ss_pred HHhcCCEEEEEeCCCCCCHHHHHHHHHHHhccCCcEEEEEeecc-CCcccc----------cccHHHHH--HHHHHHHHH
Confidence 9999999999999999999999999999766554 444433211 111000 00000000 000000000
Q ss_pred hhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecce
Q psy10463 359 IKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCS 422 (605)
Q Consensus 359 ~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s 422 (605)
... ...++ .. ...+..+++|+++.++++..+. ..| .+|+||++|+.+.|+++..+|-.
T Consensus 146 ~~~--~~~~~-~d-~~~g~~~~~r~~~~~~~~~~~~-~~~-~~d~el~~r~~~~g~~~~~vpi~ 203 (211)
T cd04188 146 RLL--LGLGI-KD-TQCGFKLFTRDAARRLFPRLHL-ERW-AFDVELLVLARRLGYPIEEVPVR 203 (211)
T ss_pred HHH--cCCCC-cc-cccCceeEcHHHHHHHHhhhhc-cce-EeeHHHHHHHHHcCCeEEEcCcc
Confidence 000 00111 11 2235668999999999754322 233 57999999999999999999943
No 44
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=99.83 E-value=1e-20 Score=179.64 Aligned_cols=182 Identities=19% Similarity=0.149 Sum_probs=132.0
Q ss_pred EEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhh
Q psy10463 202 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQ 281 (605)
Q Consensus 202 VIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~ 281 (605)
||||+||+. +.+.++|.|+.+|++....+|||||||+|+|+ +.+.++++..+.+ .++++..++|.|.++|+|.|++.
T Consensus 1 iii~~~n~~-~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~-~~~~~~~~~~~~~-~~~~~~~~~n~G~~~a~n~g~~~ 77 (185)
T cd04179 1 VVIPAYNEE-ENIPELVERLLAVLEEGYDYEIIVVDDGSTDG-TAEIARELAARVP-RVRVIRLSRNFGKGAAVRAGFKA 77 (185)
T ss_pred CeecccChH-hhHHHHHHHHHHHhccCCCEEEEEEcCCCCCC-hHHHHHHHHHhCC-CeEEEEccCCCCccHHHHHHHHH
Confidence 689999999 99999999999998632238999999999987 4557888888877 78999999999999999999999
Q ss_pred ccCCEEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhhh
Q psy10463 282 AEGEILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIK 360 (605)
Q Consensus 282 A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~ 360 (605)
|+|||++|+|+|+.+.|+||+.++..+...+. .++++.... ++. ........... .....
T Consensus 78 a~gd~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~g~~~~~-~~~-----~~~~~~~~~~~------------~~~~~- 138 (185)
T cd04179 78 ARGDIVVTMDADLQHPPEDIPKLLEKLLEGGADVVIGSRFVR-GGG-----AGMPLLRRLGS------------RLFNF- 138 (185)
T ss_pred hcCCEEEEEeCCCCCCHHHHHHHHHHHhccCCcEEEEEeecC-CCc-----ccchHHHHHHH------------HHHHH-
Confidence 99999999999999999999999999655544 555544321 111 00000000000 00000
Q ss_pred ccCCCCccccccccceEEEEeHHHHhHh--CCCCcccccccchhhHHHHHH
Q psy10463 361 RKDFTEPFKTPAMAGGLFAIDRAYFFHI--GAYDEEMQVWGGENLEMSFRV 409 (605)
Q Consensus 361 ~~~~~~~~~~~~~~G~~~~i~r~~f~~i--GgfDe~~~~~g~ED~dl~~Rl 409 (605)
............+.|++++++|++|+++ |+++++|. +|.|+++|+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~r~~~~~i~~~~~~~~~~----~~~~~~~~~ 185 (185)
T cd04179 139 LIRLLLGVRISDTQSGFRLFRREVLEALLSLLESNGFE----FGLELLVGA 185 (185)
T ss_pred HHHHHcCCCCcCCCCceeeeHHHHHHHHHhhccccCcc----eeeEeeecC
Confidence 0000012234567788999999999999 77877764 567777763
No 45
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.82 E-value=2.4e-19 Score=194.34 Aligned_cols=210 Identities=24% Similarity=0.233 Sum_probs=155.8
Q ss_pred CCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeC-CCCCChHHHH
Q psy10463 197 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRS-PGRVGLIKAR 275 (605)
Q Consensus 197 ~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~-~~n~G~~~ar 275 (605)
.|++||+||+|||+...+.+++.|+.+|+++. +|||+|||+|+|++ .+.+++...+++.+++++.. .++.|.++|.
T Consensus 53 ~p~vsviiP~ynE~~~~~~~~l~s~~~~dyp~--~evivv~d~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~gK~~al 129 (439)
T COG1215 53 LPKVSVIIPAYNEEPEVLEETLESLLSQDYPR--YEVIVVDDGSTDET-YEILEELGAEYGPNFRVIYPEKKNGGKAGAL 129 (439)
T ss_pred CCceEEEEecCCCchhhHHHHHHHHHhCCCCC--ceEEEECCCCChhH-HHHHHHHHhhcCcceEEEeccccCccchHHH
Confidence 59999999999999339999999999999988 79999999999984 55788888877436777754 6788999999
Q ss_pred HHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCch
Q psy10463 276 LLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSS 355 (605)
Q Consensus 276 N~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~ 355 (605)
|.|+..++||+|+++|+|..++||+|.+++..+..++..+++........... ...-.....+.....+
T Consensus 130 ~~~l~~~~~d~V~~~DaD~~~~~d~l~~~~~~f~~~~~~~v~~~~~~~~~~~~---~~~l~~~~~~~~~~~~-------- 198 (439)
T COG1215 130 NNGLKRAKGDVVVILDADTVPEPDALRELVSPFEDPPVGAVVGTPRIRNRPDP---SNLLGRIQAIEYLSAF-------- 198 (439)
T ss_pred HHHHhhcCCCEEEEEcCCCCCChhHHHHHHhhhcCCCeeEEeCCceeeecCCh---hhhcchhcchhhhhhH--------
Confidence 99999999999999999999999999999999999877644322211111000 0000000000000000
Q ss_pred hHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEE
Q psy10463 356 DAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVA 425 (605)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~ 425 (605)
.... ...........+.|++.++||++++++||+++..- .||.++++|+...|+++.++|++.+.
T Consensus 199 ~~~~--~~~~~~g~~~~~~G~~~~~rr~aL~~~g~~~~~~i---~ED~~lt~~l~~~G~~~~~~~~~~~~ 263 (439)
T COG1215 199 YFRL--RAASKGGLISFLSGSSSAFRRSALEEVGGWLEDTI---TEDADLTLRLHLRGYRVVYVPEAIVW 263 (439)
T ss_pred HHhh--hhhhhcCCeEEEcceeeeEEHHHHHHhCCCCCCce---eccHHHHHHHHHCCCeEEEeecceEe
Confidence 0000 00000113456789999999999999999999875 79999999999999999999998544
No 46
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=99.81 E-value=1.5e-19 Score=168.60 Aligned_cols=179 Identities=25% Similarity=0.247 Sum_probs=127.1
Q ss_pred EEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhh
Q psy10463 202 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQ 281 (605)
Q Consensus 202 VIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~ 281 (605)
||||+||++ +.|.++|.|+++|+.+. +|||||||+|++.+.. .+.++....+..+.++..+++.|++.++|.|++.
T Consensus 1 Viip~~n~~-~~l~~~l~sl~~q~~~~--~~iivvdd~s~d~t~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~n~~~~~ 76 (180)
T cd06423 1 IIVPAYNEE-AVIERTIESLLALDYPK--LEVIVVDDGSTDDTLE-ILEELAALYIRRVLVVRDKENGGKAGALNAGLRH 76 (180)
T ss_pred CeecccChH-HHHHHHHHHHHhCCCCc--eEEEEEeCCCccchHH-HHHHHhccccceEEEEEecccCCchHHHHHHHHh
Confidence 689999999 99999999999998755 7999999999998544 5666655443357888899999999999999999
Q ss_pred ccCCEEEEecCCcccCcChHHHHHHHHHcCC-cEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhhh
Q psy10463 282 AEGEILVFLDAHCECTLGWLENLVARVAEDR-TRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIK 360 (605)
Q Consensus 282 A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~-~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~ 360 (605)
++++|++|+|+|+.+.++||+.++..+.+++ ..++++.........-...... ...+. ...... ..
T Consensus 77 ~~~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~-~~------- 143 (180)
T cd06423 77 AKGDIVVVLDADTILEPDALKRLVVPFFADPKVGAVQGRVRVRNGSENLLTRLQ---AIEYL--SIFRLG-RR------- 143 (180)
T ss_pred cCCCEEEEECCCCCcChHHHHHHHHHhccCCCeeeEeeeEEEecCcCcceeccc---hheec--ceeeee-ee-------
Confidence 9999999999999999999999966665544 4666665544333210000000 00000 000000 00
Q ss_pred ccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchh
Q psy10463 361 RKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGEN 402 (605)
Q Consensus 361 ~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED 402 (605)
........+.+.|++++++|++|+++||||+.+. +||
T Consensus 144 --~~~~~~~~~~~~g~~~~~~~~~~~~~ggf~~~~~---~eD 180 (180)
T cd06423 144 --AQSALGGVLVLSGAFGAFRREALREVGGWDEDTL---TED 180 (180)
T ss_pred --hhheecceeecCchHHHHHHHHHHHhCCccccCc---CCC
Confidence 0001122346788899999999999999999875 465
No 47
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=99.81 E-value=2.5e-19 Score=169.82 Aligned_cols=179 Identities=22% Similarity=0.161 Sum_probs=128.5
Q ss_pred EEEEeechhhHHHHHHHHHHHhcCC-CCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHh
Q psy10463 202 IVIVFHNEAWSALLRTVHSVISRSP-RSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGAR 280 (605)
Q Consensus 202 VIIp~~n~~~~~l~~~l~sl~~q~~-~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~ 280 (605)
||||+||++ ..+.+++.++..+.. ....+|||||||||+|++ .+.++++.++.+ +++++...+|.|.++|+|.|++
T Consensus 1 viIp~~n~~-~~l~~~l~sl~~~~~~~~~~~eiivvdd~s~d~t-~~~~~~~~~~~~-~i~~i~~~~n~G~~~a~n~g~~ 77 (181)
T cd04187 1 IVVPVYNEE-ENLPELYERLKAVLESLGYDYEIIFVDDGSTDRT-LEILRELAARDP-RVKVIRLSRNFGQQAALLAGLD 77 (181)
T ss_pred CEEeecCch-hhHHHHHHHHHHHHHhcCCCeEEEEEeCCCCccH-HHHHHHHHhhCC-CEEEEEecCCCCcHHHHHHHHH
Confidence 699999999 888888888766542 122379999999999985 447788877777 8999999999999999999999
Q ss_pred hccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhhh
Q psy10463 281 QAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIK 360 (605)
Q Consensus 281 ~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~ 360 (605)
.|+|+|++|+|+|+.+.++||+.+++.+..+.. ++.+....... .. . .....+ .......
T Consensus 78 ~a~~d~i~~~D~D~~~~~~~l~~l~~~~~~~~~-~v~g~~~~~~~-------~~-~-~~~~~~---------~~~~~~~- 137 (181)
T cd04187 78 HARGDAVITMDADLQDPPELIPEMLAKWEEGYD-VVYGVRKNRKE-------SW-L-KRLTSK---------LFYRLIN- 137 (181)
T ss_pred hcCCCEEEEEeCCCCCCHHHHHHHHHHHhCCCc-EEEEEecCCcc-------hH-H-HHHHHH---------HHHHHHH-
Confidence 999999999999999999999999999665544 44433211100 00 0 000000 0000000
Q ss_pred ccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHH
Q psy10463 361 RKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFR 408 (605)
Q Consensus 361 ~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~R 408 (605)
.....+.+...+++++++|++|+++|+||+.+.. ..+++++++
T Consensus 138 ---~~~~~~~~~~~~~~~~~~r~~~~~i~~~d~~~~~--~~~~~~~~~ 180 (181)
T cd04187 138 ---KLSGVDIPDNGGDFRLMDRKVVDALLLLPERHRF--LRGLIAWVG 180 (181)
T ss_pred ---HHcCCCCCCCCCCEEEEcHHHHHHHHhcCCCCcc--HHHHHHHhc
Confidence 0011234567788999999999999999999873 677776653
No 48
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=99.78 E-value=1.1e-18 Score=173.89 Aligned_cols=191 Identities=12% Similarity=0.094 Sum_probs=130.2
Q ss_pred EEEEeechhhHHHHHHHHHHHhcCCC--------CCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCC---
Q psy10463 202 IVIVFHNEAWSALLRTVHSVISRSPR--------SMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVG--- 270 (605)
Q Consensus 202 VIIp~~n~~~~~l~~~l~sl~~q~~~--------~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G--- 270 (605)
||||+|||+...|.++|+|+++|+++ ...+|||||||||+|.. ..+...
T Consensus 1 v~ip~yNE~~~~i~~~l~sv~~q~y~~~~~~~~~~~~~evivv~Dgs~d~~--------------------~gk~~~~~~ 60 (244)
T cd04190 1 VCVTMYNEDEEELARTLDSILKNDYPFCARGGDSWKKIVVCVIFDGAIKKN--------------------RGKRDSQLW 60 (244)
T ss_pred CEEeeecCCHHHHHHHHHHHHHhhHHHHhcCCCCccEEEEEEEeCCccccc--------------------CcchHHHHH
Confidence 79999999536899999999999998 44589999999999810 001011
Q ss_pred hHHHHHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCC-eeEEecccccceeeeeccceee
Q psy10463 271 LIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDV-TFAYVRSFELHWGAFNWELHFR 348 (605)
Q Consensus 271 ~~~arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~-~~~~~~~~~~~~g~~~~~l~~~ 348 (605)
+..+.|.|+..|+||||+++|+|+.++|+||+.+++.+..++. ++|++.+...+.. ++. .....+.+....
T Consensus 61 ~~~~~~~~~~~a~~e~i~~~DaD~~~~~~~l~~l~~~~~~~p~vg~v~g~~~~~~~~~~~~------~~~q~~ey~~~~- 133 (244)
T cd04190 61 FFNYFCRVLFPDDPEFILLVDADTKFDPDSIVQLYKAMDKDPEIGGVCGEIHPMGKKQGPL------VMYQVFEYAISH- 133 (244)
T ss_pred HHHHHHHHhhcCCCCEEEEECCCCcCCHhHHHHHHHHHHhCCCEEEEEeeeEEcCCcchhH------HHhHheehhhhh-
Confidence 1246788999999999999999999999999999999976554 5666665433321 110 000001110000
Q ss_pred EeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCccc----------c-------cccchhhHHHHHHHH
Q psy10463 349 WYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEM----------Q-------VWGGENLEMSFRVWQ 411 (605)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~----------~-------~~g~ED~dl~~Rl~~ 411 (605)
+.. .... . ..-.+..+.|+++++|++.+.++|++...+ . ..-+||.+|++|+..
T Consensus 134 ~~~---~~~~----s--~~g~~~~~~G~~~~~R~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ED~~l~~~l~~ 204 (244)
T cd04190 134 WLD---KAFE----S--VFGFVTCLPGCFSMYRIEALKGDNGGKGPLLDYAYLTNTVDSLHKKNNLDLGEDRILCTLLLK 204 (244)
T ss_pred hhc---ccHH----H--cCCceEECCCceEEEEehhhcCCccccccchhhccccCcccchHHHHHHhHhcccceeHHHhc
Confidence 000 0000 0 001134678899999999999998765421 0 113799999999999
Q ss_pred cCCeEEE--ecceEEEEEc
Q psy10463 412 CGGSIEI--APCSHVAHLF 428 (605)
Q Consensus 412 ~G~~i~~--~p~s~v~H~~ 428 (605)
.|+++.+ .|.+.++...
T Consensus 205 ~G~~~~~~~~~~a~~~~~~ 223 (244)
T cd04190 205 AGPKRKYLYVPGAVAETDV 223 (244)
T ss_pred cCCccEEEEecccEEEEEC
Confidence 9999999 9999887654
No 49
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=99.77 E-value=7.4e-19 Score=167.09 Aligned_cols=178 Identities=21% Similarity=0.181 Sum_probs=117.7
Q ss_pred EEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhh
Q psy10463 202 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQ 281 (605)
Q Consensus 202 VIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~ 281 (605)
||||+||++ +.+.++|+++.+|+++...+|||||||+|+|++.+ .++ .+...+.....+.+.|.+.|+|.|++.
T Consensus 1 VvIp~~ne~-~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~t~~-~~~----~~~~~~~~~~~~~~~gk~~aln~g~~~ 74 (183)
T cd06438 1 ILIPAHNEE-AVIGNTVRSLKAQDYPRELYRIFVVADNCTDDTAQ-VAR----AAGATVLERHDPERRGKGYALDFGFRH 74 (183)
T ss_pred CEEeccchH-HHHHHHHHHHHhcCCCCcccEEEEEeCCCCchHHH-HHH----HcCCeEEEeCCCCCCCHHHHHHHHHHH
Confidence 699999999 99999999999998864458999999999998543 333 333244444556788999999999987
Q ss_pred c-----cCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchh
Q psy10463 282 A-----EGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSD 356 (605)
Q Consensus 282 A-----~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~ 356 (605)
+ ++|+|+|+|+|+.++|+||..++..+.++...+.+... ..+... .. . .....+. +. .....
T Consensus 75 a~~~~~~~d~v~~~DaD~~~~p~~l~~l~~~~~~~~~~v~g~~~-~~~~~~-----~~-~-~~~~~~~--~~---~~~~~ 141 (183)
T cd06438 75 LLNLADDPDAVVVFDADNLVDPNALEELNARFAAGARVVQAYYN-SKNPDD-----SW-I-TRLYAFA--FL---VFNRL 141 (183)
T ss_pred HHhcCCCCCEEEEEcCCCCCChhHHHHHHHHHhhCCCeeEEEEe-eeCCcc-----CH-H-HHHHHHH--HH---HHHHH
Confidence 6 49999999999999999999999999876654444221 111100 00 0 0000000 00 00000
Q ss_pred HhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHH
Q psy10463 357 AIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEM 405 (605)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl 405 (605)
......... ......|+++++||++|++ |||++... .||+||
T Consensus 142 ~~~~~~~~~---~~~~~~G~~~~~rr~~l~~-~g~~~~~l---~ED~~~ 183 (183)
T cd06438 142 RPLGRSNLG---LSCQLGGTGMCFPWAVLRQ-APWAAHSL---TEDLEF 183 (183)
T ss_pred HHHHHHHcC---CCeeecCchhhhHHHHHHh-CCCCCCCc---ccccCC
Confidence 000000000 1123568888999999999 88987543 699875
No 50
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=99.74 E-value=2.9e-17 Score=170.36 Aligned_cols=209 Identities=16% Similarity=0.142 Sum_probs=139.4
Q ss_pred ccCCcceEEEEeechhhHHHHHHHHHHHhcCC------CCCceeEEEeeCCCChHHHHHHHHHHHHHC---CCCEEEEeC
Q psy10463 195 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSP------RSMLKEILLVDDASTREFLKSSLDEYVAKL---SVPTRVIRS 265 (605)
Q Consensus 195 ~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~------~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~---~~~v~~i~~ 265 (605)
...|.+|||||+||++ ..+.++|+++.++.. +...+|||||||||+|++. +.++++.+.. ..+++++..
T Consensus 67 ~~~~~isVVIP~yNe~-~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T~-~i~~~~~~~~~~~~~~i~vi~~ 144 (333)
T PTZ00260 67 DSDVDLSIVIPAYNEE-DRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTL-KVAKDFWRQNINPNIDIRLLSL 144 (333)
T ss_pred CCCeEEEEEEeeCCCH-HHHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCchH-HHHHHHHHhcCCCCCcEEEEEc
Confidence 4578899999999999 999999999876421 1223799999999999854 4677777654 126999999
Q ss_pred CCCCChHHHHHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHc---CCcEEEeeeEeeecCCeeEEecccccceeeee
Q psy10463 266 PGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAE---DRTRVVCPVIDIISDVTFAYVRSFELHWGAFN 342 (605)
Q Consensus 266 ~~n~G~~~arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~---~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~ 342 (605)
+.|.|.+.|+|.|++.|+|++|+++|+|...++++++.+++.+.+ +..++|.+......... .......+.
T Consensus 145 ~~N~G~~~A~~~Gi~~a~gd~I~~~DaD~~~~~~~l~~l~~~l~~~~~~~~dvV~GsR~~~~~~~------~~~~~~~~r 218 (333)
T PTZ00260 145 LRNKGKGGAVRIGMLASRGKYILMVDADGATDIDDFDKLEDIMLKIEQNGLGIVFGSRNHLVDSD------VVAKRKWYR 218 (333)
T ss_pred CCCCChHHHHHHHHHHccCCEEEEEeCCCCCCHHHHHHHHHHHHHhhccCCceEEeeccccccCc------ccccCcHHH
Confidence 999999999999999999999999999999999999999998864 44444443321110000 000000000
Q ss_pred ccceeeEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecce
Q psy10463 343 WELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCS 422 (605)
Q Consensus 343 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s 422 (605)
+.....-........ .........|..+++|++++.+= .......| .-|.|+..++...|.++..+|-.
T Consensus 219 -----~~~~~~~~~l~~~~~----~~~i~D~~~Gfk~~~r~~~~~i~-~~~~~~~~-~fd~Ell~~a~~~g~~I~EvPv~ 287 (333)
T PTZ00260 219 -----NILMYGFHFIVNTIC----GTNLKDTQCGFKLFTRETARIIF-PSLHLERW-AFDIEIVMIAQKLNLPIAEVPVN 287 (333)
T ss_pred -----HHHHHHHHHHHHHHc----CCCcccCCCCeEEEeHHHHHHHh-hhccccCc-cchHHHHHHHHHcCCCEEEEcee
Confidence 000000000000000 01122234456789999998871 11122233 35899999999999999999974
No 51
>KOG2978|consensus
Probab=99.74 E-value=5.4e-17 Score=145.45 Aligned_cols=212 Identities=17% Similarity=0.230 Sum_probs=156.5
Q ss_pred CCcceEEEEeechhhHHHH---HHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCC-CCEEEEeCCCCCChH
Q psy10463 197 LPKSSIVIVFHNEAWSALL---RTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLS-VPTRVIRSPGRVGLI 272 (605)
Q Consensus 197 ~p~vSVIIp~~n~~~~~l~---~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~-~~v~~i~~~~n~G~~ 272 (605)
.++.|||+|+|||. ..|. +.+.....+.... +|||+|||+|.|++.+ .++++++.++ .+|.+.......|++
T Consensus 2 ~~kYsvilPtYnEk-~Nlpi~~~li~~~~~e~~~~--~eiIivDD~SpDGt~~-~a~~L~k~yg~d~i~l~pR~~klGLg 77 (238)
T KOG2978|consen 2 SIKYSVILPTYNEK-ENLPIITRLIAKYMSEEGKK--YEIIIVDDASPDGTQE-VAKALQKIYGEDNILLKPRTKKLGLG 77 (238)
T ss_pred CcceeEEeccccCC-CCCeeeHHHHHhhhhhhcCc--eEEEEEeCCCCCccHH-HHHHHHHHhCCCcEEEEeccCcccch
Confidence 46789999999998 6554 4444445444444 8999999999999544 6777776554 478888888889999
Q ss_pred HHHHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeec
Q psy10463 273 KARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTY 352 (605)
Q Consensus 273 ~arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~ 352 (605)
.|.-.|+++|+|+|++.||+|...+|.++.++++..+++.-++|.+. .|.++ .|...|.+..+....
T Consensus 78 tAy~hgl~~a~g~fiviMDaDlsHhPk~ipe~i~lq~~~~~div~GT---------RYa~~----ggV~gW~mkRk~IS~ 144 (238)
T KOG2978|consen 78 TAYIHGLKHATGDFIVIMDADLSHHPKFIPEFIRLQKEGNYDIVLGT---------RYAGG----GGVYGWDMKRKIISR 144 (238)
T ss_pred HHHHhhhhhccCCeEEEEeCccCCCchhHHHHHHHhhccCcceeeee---------eEcCC----CceecchhhHHHHhh
Confidence 99999999999999999999999999999999999998875554432 34332 445668888777777
Q ss_pred CchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcccC
Q psy10463 353 GSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRKA 431 (605)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r~~ 431 (605)
+...+.....+ ..+..++|++-+.+|++.+.+-. +-.-.+| -=..|+..|+.+.|+.|--+|-+.+...+..+
T Consensus 145 gAn~la~~ll~----~~~sdltGsFrLykk~vl~~li~-e~vSkGy-vfqmEll~ra~~~~y~IgEvPitFvdR~~GeS 217 (238)
T KOG2978|consen 145 GANFLARILLN----PGVSDLTGSFRLYKKEVLEKLIE-ESVSKGY-VFQMELLARARQHGYTIGEVPITFVDRTYGES 217 (238)
T ss_pred hhHHHHHHhcc----CCCccCcceeeeehHHHHHhhHH-Hhhccch-hhhHHHHHhccccCceEeecceEEEeeccccc
Confidence 76665543221 22456788888888888876521 0001111 23689999999999999999998887666443
No 52
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=99.73 E-value=8.7e-17 Score=160.13 Aligned_cols=206 Identities=14% Similarity=0.064 Sum_probs=134.8
Q ss_pred ceEEEEeechhhHHHHHHHHHHHh----cCC-CCCceeEEEeeCCCChHHHH---HHHHHHHHHCC--CCEEEEeCCCCC
Q psy10463 200 SSIVIVFHNEAWSALLRTVHSVIS----RSP-RSMLKEILLVDDASTREFLK---SSLDEYVAKLS--VPTRVIRSPGRV 269 (605)
Q Consensus 200 vSVIIp~~n~~~~~l~~~l~sl~~----q~~-~~~~~eIIvVDd~S~d~~~~---~~l~~~~~~~~--~~v~~i~~~~n~ 269 (605)
|||+||+||++...+.++|.+..+ |.+ +. +||+++||++++.... ..+.+++++++ .++++++.+++.
T Consensus 1 ~SIliP~~ne~~~~l~~~l~~~~~~~~~~~~~~~--~eI~vldD~~d~~~~~~~~~~~~~l~~~~~~~~~v~~~~r~~~~ 78 (254)
T cd04191 1 TAIVMPVYNEDPARVFAGLRAMYESLAKTGLADH--FDFFILSDTRDPDIWLAEEAAWLDLCEELGAQGRIYYRRRRENT 78 (254)
T ss_pred CEEEEeCCCCCHHHHHHHHHHHHHHHHhcCCcCc--eEEEEECCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEcCCCC
Confidence 699999999995558899988775 554 44 8999999998764321 12334544443 368999999988
Q ss_pred ChHHH-HHHHHhh--ccCCEEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCCeeEEecccccceeeeeccc
Q psy10463 270 GLIKA-RLLGARQ--AEGEILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDVTFAYVRSFELHWGAFNWEL 345 (605)
Q Consensus 270 G~~~a-rN~G~~~--A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l 345 (605)
|...+ .|.++.. +++|||+++|+|..+.|++|..++..+..++. ++|.......+.+++..
T Consensus 79 g~Kag~l~~~~~~~~~~~~~i~~~DaD~~~~p~~l~~~v~~~~~~~~vg~vq~~~~~~n~~~~~~--------------- 143 (254)
T cd04191 79 GRKAGNIADFCRRWGSRYDYMVVLDADSLMSGDTIVRLVRRMEANPRAGIIQTAPKLIGAETLFA--------------- 143 (254)
T ss_pred CccHHHHHHHHHHhCCCCCEEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEeCCceeECCCCHHH---------------
Confidence 87444 4445544 68899999999999999999999999986554 55543332333222100
Q ss_pred eeeEeecCchhHhh--hccCCCCccccccccceEEEEeHHHHhHhCCCCc--ccccc----cchhhHHHHHHHHcCCeEE
Q psy10463 346 HFRWYTYGSSDAII--KRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDE--EMQVW----GGENLEMSFRVWQCGGSIE 417 (605)
Q Consensus 346 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe--~~~~~----g~ED~dl~~Rl~~~G~~i~ 417 (605)
++.......... .............+.|.++++||+.|+++|++.+ ++..| -.||+++++++...|+++.
T Consensus 144 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~~~~~~~i~g~g~~~~~~l~eD~~l~~~~~~~G~ri~ 221 (254)
T cd04191 144 --RLQQFANRLYGPVFGRGLAAWQGGEGNYWGHNAIIRVAAFMEHCALPVLPGRPPFGGHILSHDFVEAALMRRAGWEVR 221 (254)
T ss_pred --HHHHHHHHHHHHHHHHHHHHhcCCccCccceEEEEEHHHHHHhcCCccccCCCCCCCCeecHHHHHHHHHHHcCCEEE
Confidence 000000000000 0000000001234678999999999999766542 22222 2699999999999999999
Q ss_pred EecceEE
Q psy10463 418 IAPCSHV 424 (605)
Q Consensus 418 ~~p~s~v 424 (605)
+.|.+..
T Consensus 222 ~~~~~~~ 228 (254)
T cd04191 222 LAPDLEG 228 (254)
T ss_pred EccCCcc
Confidence 9998753
No 53
>PRK10073 putative glycosyl transferase; Provisional
Probab=99.73 E-value=1.7e-17 Score=172.00 Aligned_cols=97 Identities=26% Similarity=0.322 Sum_probs=86.7
Q ss_pred CCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHH
Q psy10463 88 FLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKAR 167 (605)
Q Consensus 88 ~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~ 167 (605)
..|.+|||||+||++ ++|.+||+|+++|++++ +|||||||||+|+|. ++++++.++. ++++++.. +|.|.+.|+
T Consensus 4 ~~p~vSVIIP~yN~~-~~L~~~l~Sl~~Qt~~~--~EIIiVdDgStD~t~-~i~~~~~~~~-~~i~vi~~-~n~G~~~ar 77 (328)
T PRK10073 4 STPKLSIIIPLYNAG-KDFRAFMESLIAQTWTA--LEIIIVNDGSTDNSV-EIAKHYAENY-PHVRLLHQ-ANAGVSVAR 77 (328)
T ss_pred CCCeEEEEEeccCCH-HHHHHHHHHHHhCCCCC--eEEEEEeCCCCccHH-HHHHHHHhhC-CCEEEEEC-CCCChHHHH
Confidence 468999999999999 99999999999999987 799999999999984 5677776655 46888875 589999999
Q ss_pred HHHhhhccCceEEEecCcccccc
Q psy10463 168 LLGARQAEGEILVFLDAHCECTL 190 (605)
Q Consensus 168 n~g~~~a~g~~i~~lD~d~~~~~ 190 (605)
|.|++.|+|+|++|+|+|+...+
T Consensus 78 N~gl~~a~g~yi~flD~DD~~~p 100 (328)
T PRK10073 78 NTGLAVATGKYVAFPDADDVVYP 100 (328)
T ss_pred HHHHHhCCCCEEEEECCCCccCh
Confidence 99999999999999999998764
No 54
>PRK10018 putative glycosyl transferase; Provisional
Probab=99.72 E-value=3.1e-17 Score=165.51 Aligned_cols=98 Identities=27% Similarity=0.274 Sum_probs=87.0
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhc-CCCeEEeecCCCcchHH
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKL-SVPTRVIRSPGRVGLIK 165 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~-~~~v~~~~~~~~~G~~~ 165 (605)
...|.+|||||+||++ ++|.+||+|+++|++++ +|||||||||++. +.+.++++.. .+++++++++.|.|.+.
T Consensus 2 ~~~p~VSVIip~yN~~-~~l~~~l~Svl~Qt~~~--~EiIVVDDgS~~~---~~~~~~~~~~~~~ri~~i~~~~n~G~~~ 75 (279)
T PRK10018 2 KDNPLISIYMPTWNRQ-QLAIRAIKSVLRQDYSN--WEMIIVDDCSTSW---EQLQQYVTALNDPRITYIHNDINSGACA 75 (279)
T ss_pred CCCCEEEEEEEeCCCH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCCH---HHHHHHHHHcCCCCEEEEECCCCCCHHH
Confidence 3579999999999999 99999999999999988 8999999999963 3356666653 45799999999999999
Q ss_pred HHHHHhhhccCceEEEecCcccccc
Q psy10463 166 ARLLGARQAEGEILVFLDAHCECTL 190 (605)
Q Consensus 166 a~n~g~~~a~g~~i~~lD~d~~~~~ 190 (605)
|+|.|+..|+|+|++|+|+|+.+.+
T Consensus 76 a~N~gi~~a~g~~I~~lDaDD~~~p 100 (279)
T PRK10018 76 VRNQAIMLAQGEYITGIDDDDEWTP 100 (279)
T ss_pred HHHHHHHHcCCCEEEEECCCCCCCc
Confidence 9999999999999999999998764
No 55
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=99.72 E-value=1.9e-16 Score=170.74 Aligned_cols=207 Identities=16% Similarity=0.108 Sum_probs=139.2
Q ss_pred ccCCcceEEEEeechhhHHHHHHHHHHHhc-CCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCC--CCCh
Q psy10463 195 EFLPKSSIVIVFHNEAWSALLRTVHSVISR-SPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG--RVGL 271 (605)
Q Consensus 195 ~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q-~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~--n~G~ 271 (605)
...|.++|+||+|||+ ..+.++|++++.+ .++. +||+|+||+|+|++.. .++++.+++| +++++..+. ..|.
T Consensus 63 ~~~p~vaIlIPA~NE~-~vI~~~l~s~L~~ldY~~--~eIiVv~d~ndd~T~~-~v~~l~~~~p-~v~~vv~~~~gp~~K 137 (504)
T PRK14716 63 VPEKRIAIFVPAWREA-DVIGRMLEHNLATLDYEN--YRIFVGTYPNDPATLR-EVDRLAARYP-RVHLVIVPHDGPTSK 137 (504)
T ss_pred CCCCceEEEEeccCch-hHHHHHHHHHHHcCCCCC--eEEEEEECCCChhHHH-HHHHHHHHCC-CeEEEEeCCCCCCCH
Confidence 3489999999999999 9999999997654 5765 7999999999988544 7888888888 677555433 3458
Q ss_pred HHHHHHHHhhc------cC---CEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeee
Q psy10463 272 IKARLLGARQA------EG---EILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFN 342 (605)
Q Consensus 272 ~~arN~G~~~A------~g---d~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~ 342 (605)
+.|.|.|++.+ +| |+|+++|+|+.++|++|..+...+ .+...+..|.... +.... ....+.+.
T Consensus 138 a~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~~v~Pd~Lr~~~~~~-~~~~~VQ~pv~~~-~~~~~------~~~ag~y~ 209 (504)
T PRK14716 138 ADCLNWIYQAIFAFERERGIRFAIIVLHDAEDVIHPLELRLYNYLL-PRHDFVQLPVFSL-PRDWG------EWVAGTYM 209 (504)
T ss_pred HHHHHHHHHHHHHhhhhcCCCcCEEEEEcCCCCcCccHHHHHHhhc-CCCCEEecceecc-CCchh------HHHHHHHH
Confidence 88999998654 56 999999999999999998765544 3333333444311 11000 00001000
Q ss_pred ccceeeEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHh-----CC-CCcccccccchhhHHHHHHHHcCCeE
Q psy10463 343 WELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHI-----GA-YDEEMQVWGGENLEMSFRVWQCGGSI 416 (605)
Q Consensus 343 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~i-----Gg-fDe~~~~~g~ED~dl~~Rl~~~G~~i 416 (605)
.+ |. ......... ...... .....|.++++||+.++++ |+ ||++.- .||+|+++|+.+.|+++
T Consensus 210 ~e--f~--~~~~~~l~~-r~~LG~---~~~~~Gtg~afRR~aLe~l~~~~GG~~fd~~sL---TED~dLglRL~~~G~rv 278 (504)
T PRK14716 210 DE--FA--ESHLKDLPV-REALGG---LIPSAGVGTAFSRRALERLAAERGGQPFDSDSL---TEDYDIGLRLKRAGFRQ 278 (504)
T ss_pred HH--HH--HHHHHHHHH-HHhcCC---ccccCCeeEEeEHHHHHHHHhhcCCCCCCCCCc---chHHHHHHHHHHCCCEE
Confidence 00 00 000000000 000011 1124688999999999998 33 998853 79999999999999999
Q ss_pred EEecceEEE
Q psy10463 417 EIAPCSHVA 425 (605)
Q Consensus 417 ~~~p~s~v~ 425 (605)
.+.|.+..+
T Consensus 279 ~y~p~ai~~ 287 (504)
T PRK14716 279 IFVRVRADD 287 (504)
T ss_pred EEecccccc
Confidence 999988543
No 56
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=99.72 E-value=4.4e-17 Score=156.05 Aligned_cols=112 Identities=20% Similarity=0.210 Sum_probs=90.1
Q ss_pred EEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCC---CCCChHHHHHHH
Q psy10463 202 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSP---GRVGLIKARLLG 278 (605)
Q Consensus 202 VIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~---~n~G~~~arN~G 278 (605)
||||+||++ +.|.++|+|+++|+ +. +|||||||+|+|.+.. .++ +....+ ++++++.. .+.|.+.|+|.|
T Consensus 1 ViIp~~Ne~-~~l~~~l~sl~~~~-~~--~eIivvdd~S~D~t~~-~~~-~~~~~~-~v~~i~~~~~~~~~Gk~~aln~g 73 (191)
T cd06436 1 VLVPCLNEE-AVIQRTLASLLRNK-PN--FLVLVIDDASDDDTAG-IVR-LAITDS-RVHLLRRHLPNARTGKGDALNAA 73 (191)
T ss_pred CEEeccccH-HHHHHHHHHHHhCC-CC--eEEEEEECCCCcCHHH-HHh-heecCC-cEEEEeccCCcCCCCHHHHHHHH
Confidence 699999999 99999999999998 44 7999999999998544 454 322334 78888753 568999999999
Q ss_pred Hhhcc-----------CCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeE
Q psy10463 279 ARQAE-----------GEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVI 320 (605)
Q Consensus 279 ~~~A~-----------gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i 320 (605)
++.++ +++|+|+|+|+.++|+||+.+...+......++++.+
T Consensus 74 ~~~~~~~~~~~g~~~~~d~v~~~DaD~~~~~~~l~~~~~~~~~~~v~~v~~~~ 126 (191)
T cd06436 74 YDQIRQILIEEGADPERVIIAVIDADGRLDPNALEAVAPYFSDPRVAGTQSRV 126 (191)
T ss_pred HHHHhhhccccccCCCccEEEEECCCCCcCHhHHHHHHHhhcCCceEEEeeeE
Confidence 99875 3799999999999999999988877654445555443
No 57
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=99.71 E-value=6.1e-17 Score=165.71 Aligned_cols=205 Identities=18% Similarity=0.176 Sum_probs=128.2
Q ss_pred cCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEE-eCCCCCChHHH
Q psy10463 196 FLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVI-RSPGRVGLIKA 274 (605)
Q Consensus 196 ~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i-~~~~n~G~~~a 274 (605)
..|++|||||+||++ ..|.++|.++.++.......|||||||||+|++.+ .++++..+.-...+++ ..+.|.|.+.|
T Consensus 29 ~~~~vSVVIPayNee-~~I~~~l~sl~~~~~~~~~~EIIVVDDgStD~T~~-ia~~~~~~v~~~~~~~~~~~~n~Gkg~A 106 (306)
T PRK13915 29 AGRTVSVVLPALNEE-ETVGKVVDSIRPLLMEPLVDELIVIDSGSTDATAE-RAAAAGARVVSREEILPELPPRPGKGEA 106 (306)
T ss_pred CCCCEEEEEecCCcH-HHHHHHHHHHHHHhccCCCcEEEEEeCCCccHHHH-HHHHhcchhhcchhhhhccccCCCHHHH
Confidence 478999999999999 99999999999886422236999999999998544 4554432211011222 24678999999
Q ss_pred HHHHHhhccCCEEEEecCCcc-cCcChHHHHHHHHHcC-CcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeec
Q psy10463 275 RLLGARQAEGEILVFLDAHCE-CTLGWLENLVARVAED-RTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTY 352 (605)
Q Consensus 275 rN~G~~~A~gd~i~flD~D~~-~~~~~L~~ll~~~~~~-~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~ 352 (605)
+|.|+..|+||+|+|+|+|+. ++|+||+.+++.+..+ ...++.+..... ...........++....+ .
T Consensus 107 ~~~g~~~a~gd~vv~lDaD~~~~~p~~l~~l~~~l~~~~~~~~V~g~~~r~----~~~~~~~~~~~~gr~~~~------~ 176 (306)
T PRK13915 107 LWRSLAATTGDIVVFVDADLINFDPMFVPGLLGPLLTDPGVHLVKAFYRRP----LRVSGGVDATGGGRVTEL------V 176 (306)
T ss_pred HHHHHHhcCCCEEEEEeCccccCCHHHHHHHHHHHHhCCCceEEEEEeccc----cccccccCcCCCCchHHH------H
Confidence 999999999999999999997 8999999999998744 445555431100 000000000000000000 0
Q ss_pred CchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHH-cCC-eEEEec
Q psy10463 353 GSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQ-CGG-SIEIAP 420 (605)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~-~G~-~i~~~p 420 (605)
........... ...+. ...+|.++++|++++++. |++++ +.+.++...+.. .|. ++..++
T Consensus 177 ~~~l~~~~~~~-l~~i~--dp~sG~~a~rr~~l~~l~-~~~~y----g~e~~~l~~~~~~~g~~~i~~V~ 238 (306)
T PRK13915 177 ARPLLNLLRPE-LAGFV--QPLGGEYAGRRELLESLP-FVPGY----GVEIGLLIDTLDRLGLDAIAQVD 238 (306)
T ss_pred HHHHHHHHHHh-hhccc--CcchHhHHHHHHHHHhCC-CCCCC----eehHHHHHHHHHHhCcCceEEEE
Confidence 00000000000 00111 123456889999999985 66543 458889998874 686 666665
No 58
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=99.70 E-value=8.1e-17 Score=165.46 Aligned_cols=101 Identities=54% Similarity=0.838 Sum_probs=90.1
Q ss_pred EEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhh
Q psy10463 93 SIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGAR 172 (605)
Q Consensus 93 Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~ 172 (605)
|||||+||++.+.|.+||+|+++|+++...+|||||||||+|+|...+.+.......+.+++++++.|.|++.|+|.|++
T Consensus 1 SIIIp~~N~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~~~~~~~~v~vi~~~~n~G~~~a~N~g~~ 80 (299)
T cd02510 1 SVIIIFHNEALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEYYKKYLPKVKVLRLKKREGLIRARIAGAR 80 (299)
T ss_pred CEEEEEecCcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHHHhhcCCcEEEEEcCCCCCHHHHHHHHHH
Confidence 79999999987999999999999998876579999999999999776555344455667999999999999999999999
Q ss_pred hccCceEEEecCccccccccc
Q psy10463 173 QAEGEILVFLDAHCECTLVFN 193 (605)
Q Consensus 173 ~a~g~~i~~lD~d~~~~~~~~ 193 (605)
.|+|+|++|||+|+++.+.|+
T Consensus 81 ~A~gd~i~fLD~D~~~~~~wL 101 (299)
T cd02510 81 AATGDVLVFLDSHCEVNVGWL 101 (299)
T ss_pred HccCCEEEEEeCCcccCccHH
Confidence 999999999999999987775
No 59
>KOG3738|consensus
Probab=99.70 E-value=1.2e-17 Score=165.33 Aligned_cols=345 Identities=21% Similarity=0.310 Sum_probs=194.9
Q ss_pred CeEEeecCCCcchHHHHHHHhhhccCceEEEecCccccccccccccCCcceEEEEeechhhHHHHHHHHHHHhcCCC--C
Q psy10463 151 PTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPR--S 228 (605)
Q Consensus 151 ~v~~~~~~~~~G~~~a~n~g~~~a~g~~i~~lD~d~~~~~~~~~~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~--~ 228 (605)
+++++++.++.|+...|+.|+..|.|.++.|||+|||+..+|+++.+ +.+...+.. .
T Consensus 180 kvr~LRN~~ReGLirSRvrGAdvA~a~vltFLDSHcEvN~~WLePLL---------------------~Rvaed~trvVs 238 (559)
T KOG3738|consen 180 KVRVLRNNEREGLIRSRVRGADVAQATVLTFLDSHCEVNEGWLEPLL---------------------ERVAEDTTRVVS 238 (559)
T ss_pred eeeeecccchhhhhhhhccccccccceEEEEEecceeecchhhHHHH---------------------HHHhhcccceee
Confidence 69999999999999999999999999999999999999988875332 222222110 0
Q ss_pred CceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhccCCEEEEecCCcccCcChHHHHHH--
Q psy10463 229 MLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVA-- 306 (605)
Q Consensus 229 ~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~-- 306 (605)
.+..+|-+|+.+--+.. +++. .|+ |+-+ .-.|...-++
T Consensus 239 PiiDvIn~dnf~Y~~as----adLr---------------GGF-------------DWsL--------hF~We~~~~eqr 278 (559)
T KOG3738|consen 239 PIIDVINLDNFSYVGAS----ADLR---------------GGF-------------DWSL--------HFKWEQMQLEQR 278 (559)
T ss_pred cccccccccccccccch----hhhc---------------CCc-------------ceEE--------EEEehhcCHHHH
Confidence 11355555554432210 0110 111 1111 1122111111
Q ss_pred HHHcCCc-----EEEeeeEeeecCCeeEEecccccc---eeeeeccceeeEeecCchhHhhhccCCCCc------ccccc
Q psy10463 307 RVAEDRT-----RVVCPVIDIISDVTFAYVRSFELH---WGAFNWELHFRWYTYGSSDAIIKRKDFTEP------FKTPA 372 (605)
Q Consensus 307 ~~~~~~~-----~vv~p~i~~i~~~~~~~~~~~~~~---~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 372 (605)
.-..++. .++.+-+.+||..+|.+.+.+++. |||.+.+++|+.|.|++.....++...... +..|.
T Consensus 279 ~sr~~Pt~PirtP~iAGGlfvidk~wF~~LGkyd~~mdiWGGEn~ElsfrvW~CGGslEIvPCSRVGHVFRkrHpy~FP~ 358 (559)
T KOG3738|consen 279 ESRADPTAPIRTPAIAGGLFVIDKEWFNELGKYDMDMDIWGGENLELSFRVWQCGGSLEIVPCSRVGHVFRKRHPYTFPG 358 (559)
T ss_pred hhccCCCCcccCccccceeEEecHHHHHHhcccCccccccCCcceEEEEEEEeeCCeeEEEeccchhhhhhccCCCcCCC
Confidence 1111222 223334568999999888776544 999999999999999988665544333222 22222
Q ss_pred ccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEE---ecceEEEEEcccCCCCCCCCCcchhhhhhHH
Q psy10463 373 MAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEI---APCSHVAHLFRKASPYSFPGGVSEVLYGNLA 449 (605)
Q Consensus 373 ~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~---~p~s~v~H~~r~~~~~~~~~~~~~~~~rn~~ 449 (605)
-+|..+ .-+.--...+|+.-|+-+| .|.++ ..|+. ++..|--.
T Consensus 359 gs~~ty---------------------~~NTkr~AEvWmDEYK~~yyaarPsAr-------~vpfg------~i~~rL~~ 404 (559)
T KOG3738|consen 359 GSGNTY---------------------IKNTKRAAEVWMDEYKNYYYAARPSAR-------RVPFG------NIYDRLEL 404 (559)
T ss_pred CCCcch---------------------hhcchHHHHHHHHHHHHHHHhcCchhh-------cCCCc------cHHHHHHH
Confidence 222222 1233334444444444222 12221 11221 12111112
Q ss_pred HHHHHHhhhhHhhhhccCchhhccCCccchHHHHHHhhhcCCccc----ccccccccCCCcCCCCC-ccc----cccccc
Q psy10463 450 RVALVWMDEWAEFYFKFNPEAEKQRDKQAVRSRLELRKQLKCHSF----KWYLTHVWPHHFLPMDD-KFF----GRIRHV 520 (605)
Q Consensus 450 r~a~~W~d~~k~~~~~~~p~~~~~~~~g~~~~r~~lr~~l~ck~f----~wyl~~v~p~~~~p~~~-~~~----G~ir~~ 520 (605)
|. +.-++.||||+.+++||.. +..-.....-.||..-+|-.- .==.-.+++|+....++ .++ ++ .+.
T Consensus 405 Rk-~l~CksFkWYLenVyPeL~--ip~~~~~~~g~lrqg~~Cl~s~~~~~~~~~gl~~C~~s~~nqqwa~~~t~~~-~~~ 480 (559)
T KOG3738|consen 405 RK-KLRCKSFKWYLENVYPELR--IPFKELIATGTLRQGDNCLDSQGQNSQEALGLASCHGSGGNQQWAFLRTSTQ-LIT 480 (559)
T ss_pred Hh-hcCCcchhhhhhhcCccee--ccccccccccchhccchhhhhhhcccccCcceeecccCCCCcchhhhhhhhh-HHH
Confidence 21 1237789999999999632 111111112233444445211 10133478888776543 222 22 233
Q ss_pred cccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeecCCCeeeecCCCCCCCCCceEEEeCCCCC-Ccc
Q psy10463 521 QTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIATDESVCLDVPEYENDISPRVRILACSGFN-RQR 599 (605)
Q Consensus 521 ~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~~~~~CLd~~~~~~~~g~~v~l~~C~~~~-~Q~ 599 (605)
..++||++... .+|.+|.|.+| ....+.|.|.-. .+......+++|||....+. ..+.+..|.... +|+
T Consensus 481 ~~elCL~v~~~-----~pg~~v~l~~C-~~~e~~q~~v~~-~~~l~h~~s~KOGd~~~~g~---~~l~~~~C~~~~~sQ~ 550 (559)
T KOG3738|consen 481 HRELCLAVGSN-----TPGSPVALVPC-GNNETKQRWVEL-GGHLLHAGSHLCLDNPLKGR---WLLEVSTCESHLVSQS 550 (559)
T ss_pred HHhhhheeecC-----CCCCeEEEEec-CCCCCceEEEec-CCchhcccccceeccccCCC---cceeecccccccccce
Confidence 47899998753 56899999999 444668999876 44444456789999875321 358899998877 999
Q ss_pred eEeCC
Q psy10463 600 WTYDK 604 (605)
Q Consensus 600 W~~~~ 604 (605)
|.|..
T Consensus 551 w~f~~ 555 (559)
T KOG3738|consen 551 WQFAL 555 (559)
T ss_pred eeeeh
Confidence 99864
No 60
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=99.67 E-value=1.8e-16 Score=157.55 Aligned_cols=101 Identities=17% Similarity=0.077 Sum_probs=85.0
Q ss_pred CcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHH
Q psy10463 90 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLL 169 (605)
Q Consensus 90 p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~ 169 (605)
|.+|||||+|||+ +.|.++|+|+++|+|++..+|||||||+|+|+|.+ +++++......+++++.+..+.|++.|+|.
T Consensus 1 p~vsIiIp~~Ne~-~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~-i~~~~~~~~~~~i~~~~~~~~~G~~~a~n~ 78 (241)
T cd06427 1 PVYTILVPLYKEA-EVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIA-AARALRLPSIFRVVVVPPSQPRTKPKACNY 78 (241)
T ss_pred CeEEEEEecCCcH-HHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHH-HHHHhccCCCeeEEEecCCCCCchHHHHHH
Confidence 7899999999999 99999999999999986557999999999999854 355543222234666777788999999999
Q ss_pred HhhhccCceEEEecCcccccccc
Q psy10463 170 GARQAEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 170 g~~~a~g~~i~~lD~d~~~~~~~ 192 (605)
|++.|+|+|++++|+|+.+.++|
T Consensus 79 g~~~a~gd~i~~~DaD~~~~~~~ 101 (241)
T cd06427 79 ALAFARGEYVVIYDAEDAPDPDQ 101 (241)
T ss_pred HHHhcCCCEEEEEcCCCCCChHH
Confidence 99999999999999999887543
No 61
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=99.67 E-value=1.3e-15 Score=157.69 Aligned_cols=118 Identities=25% Similarity=0.253 Sum_probs=98.0
Q ss_pred cCCcceEEEEeechhhHHHHHHHHHHH---hcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChH
Q psy10463 196 FLPKSSIVIVFHNEAWSALLRTVHSVI---SRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLI 272 (605)
Q Consensus 196 ~~p~vSVIIp~~n~~~~~l~~~l~sl~---~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~ 272 (605)
.++++|||||+|||+ +.+.++++++. ++.... +|||||||||+|++. +.++++.++.+.+++.+....|.|.+
T Consensus 4 ~~~~vSVVIP~yNE~-~~i~~~l~~l~~~~~~~~~~--~EIIvVDDgS~D~T~-~il~~~~~~~~~~v~~i~~~~n~G~~ 79 (325)
T PRK10714 4 PIKKVSVVIPVYNEQ-ESLPELIRRTTAACESLGKE--YEILLIDDGSSDNSA-EMLVEAAQAPDSHIVAILLNRNYGQH 79 (325)
T ss_pred CCCeEEEEEcccCch-hhHHHHHHHHHHHHHhCCCC--EEEEEEeCCCCCcHH-HHHHHHHhhcCCcEEEEEeCCCCCHH
Confidence 367799999999999 88888887764 455443 799999999999854 46677666544478888888899999
Q ss_pred HHHHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEee
Q psy10463 273 KARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCP 318 (605)
Q Consensus 273 ~arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p 318 (605)
.|.|.|+++|+||+++++|+|+..+|++++.+++.+.++.+ +|++
T Consensus 80 ~A~~~G~~~A~gd~vv~~DaD~q~~p~~i~~l~~~~~~~~D-vV~~ 124 (325)
T PRK10714 80 SAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADEGYD-VVGT 124 (325)
T ss_pred HHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHHHhhCC-EEEE
Confidence 99999999999999999999999999999999999976543 4444
No 62
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.65 E-value=7.1e-16 Score=148.58 Aligned_cols=100 Identities=27% Similarity=0.244 Sum_probs=89.7
Q ss_pred CcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHH
Q psy10463 90 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLL 169 (605)
Q Consensus 90 p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~ 169 (605)
|++|||||+||++++.|.+||+|+++|++++ +|||||||||+|++++.+++.+.... +.++++..+.+.|.+.|+|.
T Consensus 1 p~vsiii~~~n~~~~~l~~~l~sl~~q~~~~--~eiivvd~gs~d~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~a~n~ 77 (202)
T cd04184 1 PLISIVMPVYNTPEKYLREAIESVRAQTYPN--WELCIADDASTDPEVKRVLKKYAAQD-PRIKVVFREENGGISAATNS 77 (202)
T ss_pred CeEEEEEecccCcHHHHHHHHHHHHhCcCCC--eEEEEEeCCCCChHHHHHHHHHHhcC-CCEEEEEcccCCCHHHHHHH
Confidence 6899999999999889999999999999887 79999999999998777777766554 46889999999999999999
Q ss_pred HhhhccCceEEEecCcccccccc
Q psy10463 170 GARQAEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 170 g~~~a~g~~i~~lD~d~~~~~~~ 192 (605)
|++.|+++|++++|+|+.+.++|
T Consensus 78 g~~~a~~d~i~~ld~D~~~~~~~ 100 (202)
T cd04184 78 ALELATGEFVALLDHDDELAPHA 100 (202)
T ss_pred HHHhhcCCEEEEECCCCcCChHH
Confidence 99999999999999999886533
No 63
>PRK10063 putative glycosyl transferase; Provisional
Probab=99.65 E-value=1.4e-15 Score=151.51 Aligned_cols=93 Identities=20% Similarity=0.207 Sum_probs=77.8
Q ss_pred CcEEEEEEeecCchHHHHHHHHHHHhc---CCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHH
Q psy10463 90 PKSSIVIVFHNEAWSALLRTVHSVISR---SPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKA 166 (605)
Q Consensus 90 p~~Siiip~yN~~~~~l~~~l~sv~~~---~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a 166 (605)
|++|||||+||++ +.|.+||+||..| ++.+ +|||||||||+|+|.+ +++++... .+++++..+ +.|++.|
T Consensus 1 ~~vSVIi~~yN~~-~~l~~~l~sl~~~~~~~~~~--~EiIVvDdgStD~t~~-i~~~~~~~--~~i~~i~~~-~~G~~~A 73 (248)
T PRK10063 1 MLLSVITVAFRNL-EGIVKTHASLRHLAQDPGIS--FEWIVVDGGSNDGTRE-FLENLNGI--FNLRFVSEP-DNGIYDA 73 (248)
T ss_pred CeEEEEEEeCCCH-HHHHHHHHHHHHHHhCCCCC--EEEEEEECcCcccHHH-HHHHhccc--CCEEEEECC-CCCHHHH
Confidence 6899999999999 9999999999854 3444 7999999999999843 45554322 248888765 6699999
Q ss_pred HHHHhhhccCceEEEecCccccc
Q psy10463 167 RLLGARQAEGEILVFLDAHCECT 189 (605)
Q Consensus 167 ~n~g~~~a~g~~i~~lD~d~~~~ 189 (605)
+|.|++.|+|+|++|+|+||...
T Consensus 74 ~N~Gi~~a~g~~v~~ld~DD~~~ 96 (248)
T PRK10063 74 MNKGIAMAQGRFALFLNSGDIFH 96 (248)
T ss_pred HHHHHHHcCCCEEEEEeCCcccC
Confidence 99999999999999999999775
No 64
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.63 E-value=9.6e-16 Score=147.61 Aligned_cols=94 Identities=20% Similarity=0.239 Sum_probs=83.6
Q ss_pred EEEEEeecCc-hHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHh
Q psy10463 93 SIVIVFHNEA-WSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGA 171 (605)
Q Consensus 93 Siiip~yN~~-~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~ 171 (605)
|||||+||++ .++|.+||+|+++|++++ +|||||||||++++..++++++.++.+ ++++.++.|.|.+.|+|.|+
T Consensus 1 sviip~~n~~~~~~l~~~l~Sl~~q~~~~--~eiiivdd~ss~d~t~~~~~~~~~~~~--i~~i~~~~n~G~~~a~N~g~ 76 (201)
T cd04195 1 SVLMSVYIKEKPEFLREALESILKQTLPP--DEVVLVKDGPVTQSLNEVLEEFKRKLP--LKVVPLEKNRGLGKALNEGL 76 (201)
T ss_pred CEEEEccccchHHHHHHHHHHHHhcCCCC--cEEEEEECCCCchhHHHHHHHHHhcCC--eEEEEcCccccHHHHHHHHH
Confidence 7999999997 259999999999999886 799999999966666777777776654 99999999999999999999
Q ss_pred hhccCceEEEecCcccccc
Q psy10463 172 RQAEGEILVFLDAHCECTL 190 (605)
Q Consensus 172 ~~a~g~~i~~lD~d~~~~~ 190 (605)
+.|+|+|++|+|+|+...+
T Consensus 77 ~~a~gd~i~~lD~Dd~~~~ 95 (201)
T cd04195 77 KHCTYDWVARMDTDDISLP 95 (201)
T ss_pred HhcCCCEEEEeCCccccCc
Confidence 9999999999999998764
No 65
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=99.62 E-value=1.7e-15 Score=145.68 Aligned_cols=99 Identities=19% Similarity=0.276 Sum_probs=83.6
Q ss_pred CcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCC-CeEEeecCCCcch---HH
Q psy10463 90 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSV-PTRVIRSPGRVGL---IK 165 (605)
Q Consensus 90 p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~-~v~~~~~~~~~G~---~~ 165 (605)
|++|||||+||++ ..|.++|+|+++|++++ +|||||||+|+|+|. ++++++.+.++. .++++....+.|. +.
T Consensus 1 p~vsviip~~n~~-~~l~~~L~sl~~q~~~~--~eiivVdd~s~d~t~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 76 (196)
T cd02520 1 PGVSILKPLCGVD-PNLYENLESFFQQDYPK--YEILFCVQDEDDPAI-PVVRKLIAKYPNVDARLLIGGEKVGINPKVN 76 (196)
T ss_pred CCeEEEEecCCCC-ccHHHHHHHHHhccCCC--eEEEEEeCCCcchHH-HHHHHHHHHCCCCcEEEEecCCcCCCCHhHH
Confidence 7899999999999 88999999999999988 899999999999985 456777776653 4677777766553 45
Q ss_pred HHHHHhhhccCceEEEecCcccccccc
Q psy10463 166 ARLLGARQAEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 166 a~n~g~~~a~g~~i~~lD~d~~~~~~~ 192 (605)
++|.|++.++|+|++++|+|+.+++.|
T Consensus 77 ~~n~g~~~a~~d~i~~~D~D~~~~~~~ 103 (196)
T cd02520 77 NLIKGYEEARYDILVISDSDISVPPDY 103 (196)
T ss_pred HHHHHHHhCCCCEEEEECCCceEChhH
Confidence 678999999999999999999876544
No 66
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.62 E-value=1.5e-15 Score=147.54 Aligned_cols=94 Identities=19% Similarity=0.288 Sum_probs=85.2
Q ss_pred EEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhh
Q psy10463 93 SIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGAR 172 (605)
Q Consensus 93 Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~ 172 (605)
|||||+||++ ..|.+||+|+++|+++. +|||||||||+|+|. ++++++.++.+..++++.++.+.|.+.++|.|+.
T Consensus 1 sIvIp~yn~~-~~l~~~l~sl~~q~~~~--~eiiVvddgS~d~t~-~~~~~~~~~~~~~~~~~~~~~~~G~~~~~n~g~~ 76 (214)
T cd04196 1 AVLMATYNGE-KYLREQLDSILAQTYKN--DELIISDDGSTDGTV-EIIKEYIDKDPFIIILIRNGKNLGVARNFESLLQ 76 (214)
T ss_pred CEEEEecCcH-HHHHHHHHHHHhCcCCC--eEEEEEeCCCCCCcH-HHHHHHHhcCCceEEEEeCCCCccHHHHHHHHHH
Confidence 7999999999 99999999999999885 899999999999984 5577777776666888999999999999999999
Q ss_pred hccCceEEEecCcccccc
Q psy10463 173 QAEGEILVFLDAHCECTL 190 (605)
Q Consensus 173 ~a~g~~i~~lD~d~~~~~ 190 (605)
.++|+|++++|+|+...+
T Consensus 77 ~~~g~~v~~ld~Dd~~~~ 94 (214)
T cd04196 77 AADGDYVFFCDQDDIWLP 94 (214)
T ss_pred hCCCCEEEEECCCcccCh
Confidence 999999999999997764
No 67
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=99.62 E-value=1.9e-15 Score=149.28 Aligned_cols=101 Identities=25% Similarity=0.267 Sum_probs=84.1
Q ss_pred CcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHh---cCCCeEEeecCCCcc-hHH
Q psy10463 90 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAK---LSVPTRVIRSPGRVG-LIK 165 (605)
Q Consensus 90 p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~---~~~~v~~~~~~~~~G-~~~ 165 (605)
|++|||||+|||+ +.|.++|+|+++|+++....||||||| |+|+|+.. +.++.+. ...+++++...++.| .+.
T Consensus 1 p~vSViIp~yNe~-~~l~~~L~sl~~q~~~~~~~eIiVvD~-s~D~t~~~-~~~~~~~~~~~~~~i~~~~~~~~~G~k~~ 77 (232)
T cd06437 1 PMVTVQLPVFNEK-YVVERLIEAACALDYPKDRLEIQVLDD-STDETVRL-AREIVEEYAAQGVNIKHVRRADRTGYKAG 77 (232)
T ss_pred CceEEEEecCCcH-HHHHHHHHHHHhcCCCccceEEEEEEC-CCCcHHHH-HHHHHHHHhhcCCceEEEECCCCCCCchH
Confidence 6899999999999 999999999999999876679999998 99998654 4444333 234577777777677 588
Q ss_pred HHHHHhhhccCceEEEecCccccccccc
Q psy10463 166 ARLLGARQAEGEILVFLDAHCECTLVFN 193 (605)
Q Consensus 166 a~n~g~~~a~g~~i~~lD~d~~~~~~~~ 193 (605)
|+|.|++.|+|+|++++|+|+.+.++|+
T Consensus 78 a~n~g~~~a~~~~i~~~DaD~~~~~~~l 105 (232)
T cd06437 78 ALAEGMKVAKGEYVAIFDADFVPPPDFL 105 (232)
T ss_pred HHHHHHHhCCCCEEEEEcCCCCCChHHH
Confidence 9999999999999999999998876654
No 68
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=99.62 E-value=1.7e-14 Score=130.81 Aligned_cols=153 Identities=30% Similarity=0.403 Sum_probs=124.2
Q ss_pred EEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhh
Q psy10463 202 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQ 281 (605)
Q Consensus 202 VIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~ 281 (605)
||||++|+. +.+..++.|+.++.+.. .||+++||++++.+.. .+.+...... .+..+....+.|.+.++|.|++.
T Consensus 1 iii~~~~~~-~~l~~~l~s~~~~~~~~--~~i~i~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~ 75 (156)
T cd00761 1 VIIPAYNEE-PYLERCLESLLAQTYPN--FEVIVVDDGSTDGTLE-ILEEYAKKDP-RVIRVINEENQGLAAARNAGLKA 75 (156)
T ss_pred CEEeecCcH-HHHHHHHHHHHhCCccc--eEEEEEeCCCCccHHH-HHHHHHhcCC-CeEEEEecCCCChHHHHHHHHHH
Confidence 689999999 99999999999998644 7999999999887443 4555444322 57778888899999999999999
Q ss_pred ccCCEEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhhh
Q psy10463 282 AEGEILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIK 360 (605)
Q Consensus 282 A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~ 360 (605)
+.+++++++|+|+.+.+++++.++..+..++. .++.+.
T Consensus 76 ~~~d~v~~~d~D~~~~~~~~~~~~~~~~~~~~~~~v~~~----------------------------------------- 114 (156)
T cd00761 76 ARGEYILFLDADDLLLPDWLERLVAELLADPEADAVGGP----------------------------------------- 114 (156)
T ss_pred hcCCEEEEECCCCccCccHHHHHHHHHhcCCCceEEecc-----------------------------------------
Confidence 99999999999999999999998665554433 332210
Q ss_pred ccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeE
Q psy10463 361 RKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSI 416 (605)
Q Consensus 361 ~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i 416 (605)
++++++++.|.++|++++....+ +||.+++.++...|..+
T Consensus 115 ---------------~~~~~~~~~~~~~~~~~~~~~~~-~ed~~~~~~~~~~g~~~ 154 (156)
T cd00761 115 ---------------GNLLFRRELLEEIGGFDEALLSG-EEDDDFLLRLLRGGKVA 154 (156)
T ss_pred ---------------chheeeHHHHHHhCCcchHhcCC-cchHHHHHHHHhhcccc
Confidence 56789999999999999988754 89999999988877554
No 69
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=99.61 E-value=4.1e-15 Score=137.74 Aligned_cols=94 Identities=37% Similarity=0.488 Sum_probs=79.4
Q ss_pred EEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhh
Q psy10463 93 SIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGAR 172 (605)
Q Consensus 93 Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~ 172 (605)
|||||+||++ +.|.++|+|++.|+... +|||||||||+|+| .++++++.+ ....++++.++.+.|++.++|.|++
T Consensus 1 Svvip~~n~~-~~l~~~l~sl~~q~~~~--~eiivvdd~s~d~~-~~~~~~~~~-~~~~i~~i~~~~n~g~~~~~n~~~~ 75 (169)
T PF00535_consen 1 SVVIPTYNEA-EYLERTLESLLKQTDPD--FEIIVVDDGSTDET-EEILEEYAE-SDPNIRYIRNPENLGFSAARNRGIK 75 (169)
T ss_dssp EEEEEESS-T-TTHHHHHHHHHHHSGCE--EEEEEEECS-SSSH-HHHHHHHHC-CSTTEEEEEHCCCSHHHHHHHHHHH
T ss_pred CEEEEeeCCH-HHHHHHHHHHhhccCCC--EEEEEecccccccc-ccccccccc-ccccccccccccccccccccccccc
Confidence 8999999998 99999999999996655 89999999999988 455666665 4567999999999999999999999
Q ss_pred hccCceEEEecCccccccc
Q psy10463 173 QAEGEILVFLDAHCECTLV 191 (605)
Q Consensus 173 ~a~g~~i~~lD~d~~~~~~ 191 (605)
.|.++|++++|+|+...+.
T Consensus 76 ~a~~~~i~~ld~D~~~~~~ 94 (169)
T PF00535_consen 76 HAKGEYILFLDDDDIISPD 94 (169)
T ss_dssp H--SSEEEEEETTEEE-TT
T ss_pred ccceeEEEEeCCCceEcHH
Confidence 9999999999999988643
No 70
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=99.59 E-value=4.7e-15 Score=147.62 Aligned_cols=104 Identities=23% Similarity=0.239 Sum_probs=86.6
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcC-CCeEEeecCCCcchHH
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLS-VPTRVIRSPGRVGLIK 165 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~-~~v~~~~~~~~~G~~~ 165 (605)
...|++|||||+||++ ..|..+++++..+......+|||||||||+|+|. ++++++.+..+ ..++++.++.|.|++.
T Consensus 6 ~~~~~vsVvIp~yne~-~~l~~~l~~l~~~~~~~~~~eiivvDdgS~D~t~-~i~~~~~~~~~~~~v~~~~~~~n~G~~~ 83 (243)
T PLN02726 6 EGAMKYSIIVPTYNER-LNIALIVYLIFKALQDVKDFEIIVVDDGSPDGTQ-DVVKQLQKVYGEDRILLRPRPGKLGLGT 83 (243)
T ss_pred CCCceEEEEEccCCch-hhHHHHHHHHHHHhccCCCeEEEEEeCCCCCCHH-HHHHHHHHhcCCCcEEEEecCCCCCHHH
Confidence 4578999999999999 9999999988765432223799999999999984 45666665554 4588899999999999
Q ss_pred HHHHHhhhccCceEEEecCcccccccc
Q psy10463 166 ARLLGARQAEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 166 a~n~g~~~a~g~~i~~lD~d~~~~~~~ 192 (605)
|+|.|++.|+|+|++++|+|+...+.|
T Consensus 84 a~n~g~~~a~g~~i~~lD~D~~~~~~~ 110 (243)
T PLN02726 84 AYIHGLKHASGDFVVIMDADLSHHPKY 110 (243)
T ss_pred HHHHHHHHcCCCEEEEEcCCCCCCHHH
Confidence 999999999999999999999876543
No 71
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=99.58 E-value=8.5e-15 Score=158.14 Aligned_cols=103 Identities=17% Similarity=0.178 Sum_probs=88.9
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHH
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKA 166 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a 166 (605)
+..|.+|||||+|||+ +.|.+||+|+.+|++++...|||||||||+|+|. ++++++.+.. +.++++..+.+.|++.|
T Consensus 46 ~~~P~vsVIIP~yNe~-~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~-~il~~~~~~~-~~v~v~~~~~~~Gka~A 122 (439)
T TIGR03111 46 GKLPDITIIIPVYNSE-DTLFNCIESIYNQTYPIELIDIILANNQSTDDSF-QVFCRAQNEF-PGLSLRYMNSDQGKAKA 122 (439)
T ss_pred CCCCCEEEEEEeCCCh-HHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHH-HHHHHHHHhC-CCeEEEEeCCCCCHHHH
Confidence 5579999999999999 9999999999999999866799999999999994 4455554444 35777777788999999
Q ss_pred HHHHhhhccCceEEEecCcccccccc
Q psy10463 167 RLLGARQAEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 167 ~n~g~~~a~g~~i~~lD~d~~~~~~~ 192 (605)
+|.|++.++|+|++++|+|+.+.+++
T Consensus 123 lN~gl~~s~g~~v~~~DaD~~~~~d~ 148 (439)
T TIGR03111 123 LNAAIYNSIGKYIIHIDSDGKLHKDA 148 (439)
T ss_pred HHHHHHHccCCEEEEECCCCCcChHH
Confidence 99999999999999999999886543
No 72
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=99.58 E-value=1.9e-14 Score=149.39 Aligned_cols=102 Identities=22% Similarity=0.251 Sum_probs=86.2
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHHhcCC------ccCcceEEEEeCCCchhhHHHHHHHHHHhc---CCCeEEeec
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSP------RSMLKEILLVDDASTREFLKSSLDEYVAKL---SVPTRVIRS 157 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~------~~~~~EiivvdD~S~d~~~~~~~~~~~~~~---~~~v~~~~~ 157 (605)
...|.+|||||+|||+ ..|.++|+++.++.. +...+|||||||||+|+|.+ +++++.+.. ..+++++.+
T Consensus 67 ~~~~~isVVIP~yNe~-~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T~~-i~~~~~~~~~~~~~~i~vi~~ 144 (333)
T PTZ00260 67 DSDVDLSIVIPAYNEE-DRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTLK-VAKDFWRQNINPNIDIRLLSL 144 (333)
T ss_pred CCCeEEEEEEeeCCCH-HHHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCchHH-HHHHHHHhcCCCCCcEEEEEc
Confidence 5578999999999999 999999999987532 22237999999999999954 566666653 245999999
Q ss_pred CCCcchHHHHHHHhhhccCceEEEecCcccccc
Q psy10463 158 PGRVGLIKARLLGARQAEGEILVFLDAHCECTL 190 (605)
Q Consensus 158 ~~~~G~~~a~n~g~~~a~g~~i~~lD~d~~~~~ 190 (605)
+.|.|.+.|+|.|++.|+|++++++|+|+..++
T Consensus 145 ~~N~G~~~A~~~Gi~~a~gd~I~~~DaD~~~~~ 177 (333)
T PTZ00260 145 LRNKGKGGAVRIGMLASRGKYILMVDADGATDI 177 (333)
T ss_pred CCCCChHHHHHHHHHHccCCEEEEEeCCCCCCH
Confidence 999999999999999999999999999997754
No 73
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=99.58 E-value=6.9e-15 Score=156.21 Aligned_cols=103 Identities=22% Similarity=0.186 Sum_probs=87.4
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcC--CCeEEeecC----CC
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLS--VPTRVIRSP----GR 160 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~--~~v~~~~~~----~~ 160 (605)
...|++|||||+|||+ +.|.+||+|+++|+|+. .+|||||||+|+|+| .++++++.++.+ ++++++..+ .+
T Consensus 37 ~~~p~VSVIIpa~Ne~-~~L~~~L~sL~~q~yp~-~~eIIVVDd~StD~T-~~i~~~~~~~~~~~~~i~vi~~~~~~~g~ 113 (384)
T TIGR03469 37 EAWPAVVAVVPARNEA-DVIGECVTSLLEQDYPG-KLHVILVDDHSTDGT-ADIARAAARAYGRGDRLTVVSGQPLPPGW 113 (384)
T ss_pred CCCCCEEEEEecCCcH-hHHHHHHHHHHhCCCCC-ceEEEEEeCCCCCcH-HHHHHHHHHhcCCCCcEEEecCCCCCCCC
Confidence 4589999999999999 99999999999999984 279999999999998 455677766554 368888753 34
Q ss_pred cchHHHHHHHhhhcc-----CceEEEecCcccccccc
Q psy10463 161 VGLIKARLLGARQAE-----GEILVFLDAHCECTLVF 192 (605)
Q Consensus 161 ~G~~~a~n~g~~~a~-----g~~i~~lD~d~~~~~~~ 192 (605)
.|+..|.|.|++.|+ +|+++|+|+|+.+.++|
T Consensus 114 ~Gk~~A~n~g~~~A~~~~~~gd~llflDaD~~~~p~~ 150 (384)
T TIGR03469 114 SGKLWAVSQGIAAARTLAPPADYLLLTDADIAHGPDN 150 (384)
T ss_pred cchHHHHHHHHHHHhccCCCCCEEEEECCCCCCChhH
Confidence 688999999999999 99999999999887544
No 74
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=99.58 E-value=1.2e-14 Score=145.14 Aligned_cols=101 Identities=28% Similarity=0.320 Sum_probs=88.4
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHH
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKA 166 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a 166 (605)
..+|++|||||+||++ +.|.++|+|++.|+++...+|||||||+|+|+|.+ ++.++... .++++..+.+.|.+.|
T Consensus 26 ~~~~~isVvip~~n~~-~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~-~~~~~~~~---~v~~i~~~~~~g~~~a 100 (251)
T cd06439 26 AYLPTVTIIIPAYNEE-AVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAE-IAREYADK---GVKLLRFPERRGKAAA 100 (251)
T ss_pred CCCCEEEEEEecCCcH-HHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHH-HHHHHhhC---cEEEEEcCCCCChHHH
Confidence 5588999999999999 99999999999999887557999999999999843 45555443 5899999999999999
Q ss_pred HHHHhhhccCceEEEecCcccccccc
Q psy10463 167 RLLGARQAEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 167 ~n~g~~~a~g~~i~~lD~d~~~~~~~ 192 (605)
+|.|++.+.|+|++++|+|+.+.+.|
T Consensus 101 ~n~gi~~a~~d~i~~lD~D~~~~~~~ 126 (251)
T cd06439 101 LNRALALATGEIVVFTDANALLDPDA 126 (251)
T ss_pred HHHHHHHcCCCEEEEEccccCcCHHH
Confidence 99999999999999999999876433
No 75
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=99.58 E-value=2.1e-14 Score=141.54 Aligned_cols=101 Identities=25% Similarity=0.253 Sum_probs=88.9
Q ss_pred cceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHH
Q psy10463 199 KSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLG 278 (605)
Q Consensus 199 ~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G 278 (605)
++|||||+||++ ..|.+||+|+..++ .|||||||||+|++. ++++ .+ +++++.. .+.|++.++|.|
T Consensus 1 ~isvii~~~Ne~-~~l~~~l~sl~~~~-----~eiivvD~gStD~t~-~i~~----~~--~~~v~~~-~~~g~~~~~n~~ 66 (229)
T cd02511 1 TLSVVIITKNEE-RNIERCLESVKWAV-----DEIIVVDSGSTDRTV-EIAK----EY--GAKVYQR-WWDGFGAQRNFA 66 (229)
T ss_pred CEEEEEEeCCcH-HHHHHHHHHHhccc-----CEEEEEeCCCCccHH-HHHH----Hc--CCEEEEC-CCCChHHHHHHH
Confidence 489999999999 99999999998774 399999999999853 3444 22 5788877 889999999999
Q ss_pred HhhccCCEEEEecCCcccCcChHHHHHHHHHcCCc
Q psy10463 279 ARQAEGEILVFLDAHCECTLGWLENLVARVAEDRT 313 (605)
Q Consensus 279 ~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~ 313 (605)
+..|+++||+++|+|..++|++++.+++.+.+++.
T Consensus 67 ~~~a~~d~vl~lDaD~~~~~~~~~~l~~~~~~~~~ 101 (229)
T cd02511 67 LELATNDWVLSLDADERLTPELADEILALLATDDY 101 (229)
T ss_pred HHhCCCCEEEEEeCCcCcCHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999988764
No 76
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=99.57 E-value=7.8e-15 Score=143.52 Aligned_cols=95 Identities=25% Similarity=0.278 Sum_probs=80.5
Q ss_pred EEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCC-CeEEee----cCCCcchHHHHH
Q psy10463 94 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSV-PTRVIR----SPGRVGLIKARL 168 (605)
Q Consensus 94 iiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~-~v~~~~----~~~~~G~~~a~n 168 (605)
||||+||++ ++|.+||+|+++|+++. .+|||||||||+|+|. ++++++.++... +++++. .+.+.|.+.|+|
T Consensus 1 ViIp~yn~~-~~l~~~l~sl~~q~~~~-~~eiiVvDd~S~d~t~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~a~N 77 (219)
T cd06913 1 IILPVHNGE-QWLDECLESVLQQDFEG-TLELSVFNDASTDKSA-EIIEKWRKKLEDSGVIVLVGSHNSPSPKGVGYAKN 77 (219)
T ss_pred CEEeecCcH-HHHHHHHHHHHhCCCCC-CEEEEEEeCCCCccHH-HHHHHHHHhCcccCeEEEEecccCCCCccHHHHHH
Confidence 799999999 99999999999999873 2799999999999984 567777766533 567664 345689999999
Q ss_pred HHhhhccCceEEEecCccccccc
Q psy10463 169 LGARQAEGEILVFLDAHCECTLV 191 (605)
Q Consensus 169 ~g~~~a~g~~i~~lD~d~~~~~~ 191 (605)
.|++.|+|+|++|+|+|+...+.
T Consensus 78 ~g~~~a~gd~i~~lD~D~~~~~~ 100 (219)
T cd06913 78 QAIAQSSGRYLCFLDSDDVMMPQ 100 (219)
T ss_pred HHHHhcCCCEEEEECCCccCChh
Confidence 99999999999999999987643
No 77
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=99.56 E-value=1.2e-14 Score=143.87 Aligned_cols=98 Identities=18% Similarity=0.191 Sum_probs=86.0
Q ss_pred EEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcch-HHHHHHHh
Q psy10463 93 SIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGL-IKARLLGA 171 (605)
Q Consensus 93 Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~-~~a~n~g~ 171 (605)
|||||+|||+.+.|.++|+|+.+|++++ +|||||||+|+|+|...+++++.++.+.+++++...++.|. +.|+|.|+
T Consensus 1 siiip~~ne~~~~l~~~l~sl~~q~~~~--~eiiVvdd~s~D~t~~~~i~~~~~~~~~~i~~i~~~~~~G~~~~a~n~g~ 78 (236)
T cd06435 1 SIHVPCYEEPPEMVKETLDSLAALDYPN--FEVIVIDNNTKDEALWKPVEAHCAQLGERFRFFHVEPLPGAKAGALNYAL 78 (236)
T ss_pred CeeEeeCCCcHHHHHHHHHHHHhCCCCC--cEEEEEeCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCchHHHHHHH
Confidence 7999999998679999999999999987 79999999999999767777877777777888888877785 89999999
Q ss_pred hhcc--CceEEEecCcccccccc
Q psy10463 172 RQAE--GEILVFLDAHCECTLVF 192 (605)
Q Consensus 172 ~~a~--g~~i~~lD~d~~~~~~~ 192 (605)
+.+. ++|++++|+|+.+++.|
T Consensus 79 ~~a~~~~d~i~~lD~D~~~~~~~ 101 (236)
T cd06435 79 ERTAPDAEIIAVIDADYQVEPDW 101 (236)
T ss_pred HhcCCCCCEEEEEcCCCCcCHHH
Confidence 9986 69999999999886533
No 78
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=99.56 E-value=1.5e-14 Score=142.69 Aligned_cols=100 Identities=17% Similarity=0.167 Sum_probs=82.2
Q ss_pred CcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcc-hHHHHH
Q psy10463 90 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVG-LIKARL 168 (605)
Q Consensus 90 p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G-~~~a~n 168 (605)
|.+|||||+||++.+.|.+||+|+++|++++..+|||||||||+|+|. ++++++.... .++++....+.| .++++|
T Consensus 1 p~vsviip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~n 77 (234)
T cd06421 1 PTVDVFIPTYNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELR-ALAAELGVEY--GYRYLTRPDNRHAKAGNLN 77 (234)
T ss_pred CceEEEEecCCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHH-HHHHHhhccc--CceEEEeCCCCCCcHHHHH
Confidence 789999999998757899999999999998865799999999999973 4455554333 466666666555 577899
Q ss_pred HHhhhccCceEEEecCcccccccc
Q psy10463 169 LGARQAEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 169 ~g~~~a~g~~i~~lD~d~~~~~~~ 192 (605)
.|++.++|+|++++|+|+.+.+.|
T Consensus 78 ~~~~~a~~d~i~~lD~D~~~~~~~ 101 (234)
T cd06421 78 NALAHTTGDFVAILDADHVPTPDF 101 (234)
T ss_pred HHHHhCCCCEEEEEccccCcCccH
Confidence 999999999999999999887544
No 79
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.56 E-value=5.9e-14 Score=157.63 Aligned_cols=205 Identities=13% Similarity=0.064 Sum_probs=139.3
Q ss_pred ccCCcceEEEEeechhhHHHHHHHHHHH-hcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCC--CCCh
Q psy10463 195 EFLPKSSIVIVFHNEAWSALLRTVHSVI-SRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG--RVGL 271 (605)
Q Consensus 195 ~~~p~vSVIIp~~n~~~~~l~~~l~sl~-~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~--n~G~ 271 (605)
+..|.+||+||.|||+ ..+.+++++++ .++||+ +||+++++++++. +.+.++++.+++| +++++..+. +.|.
T Consensus 60 ~~~~~vsIlVPa~nE~-~vi~~~i~~ll~~ldYP~--~eI~vi~~~nD~~-T~~~~~~l~~~~p-~~~~v~~~~~g~~gK 134 (727)
T PRK11234 60 PDEKPLAIMVPAWNET-GVIGNMAELAATTLDYEN--YHIFVGTYPNDPA-TQADVDAVCARFP-NVHKVVCARPGPTSK 134 (727)
T ss_pred CCCCCEEEEEecCcch-hhHHHHHHHHHHhCCCCC--eEEEEEecCCChh-HHHHHHHHHHHCC-CcEEEEeCCCCCCCH
Confidence 4568999999999999 99999999987 578888 7999998877665 5557888888888 777655444 7899
Q ss_pred HHHHHHHHhhc-------c--CCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeee
Q psy10463 272 IKARLLGARQA-------E--GEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFN 342 (605)
Q Consensus 272 ~~arN~G~~~A-------~--gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~ 342 (605)
+.|.|.|+..+ . .+++++.|+|+.++|+.|. +++.+......+-+|.. ....+.. ....+.+.
T Consensus 135 a~aLN~~l~~~~~~e~~~~~~~~vvvi~DAD~~v~pd~L~-~~~~l~~~~~~VQ~p~~-p~~~~~~------~~~~~~~~ 206 (727)
T PRK11234 135 ADCLNNVLDAITQFERSANFAFAGFILHDAEDVISPMELR-LFNYLVERKDLIQIPVY-PFEREWT------HFTSGTYI 206 (727)
T ss_pred HHHHHHHHHHHHhhhcccCCcccEEEEEcCCCCCChhHHH-HHHhhcCCCCeEeeccc-CCCccHH------HHHHHHHH
Confidence 99999999887 3 3568889999999999998 66777655444444432 0000000 00000000
Q ss_pred ccceeeEeecCchhHhhhccCCCCccccccccceEEEE-eH--HHHhHhC---CCCcccccccchhhHHHHHHHHcCCeE
Q psy10463 343 WELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAI-DR--AYFFHIG---AYDEEMQVWGGENLEMSFRVWQCGGSI 416 (605)
Q Consensus 343 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i-~r--~~f~~iG---gfDe~~~~~g~ED~dl~~Rl~~~G~~i 416 (605)
..|.+ ......... .....+ ...+|..+++ || +.+.++| +|+.+.- .||+|+++|+...|+++
T Consensus 207 --~EFa~-~~~~~~~~~--~~lgg~---~~l~G~~~af~Rr~l~al~~~ggg~~~~~~~l---TED~dlg~rL~~~G~~v 275 (727)
T PRK11234 207 --DEFAE-LHGKDVPVR--EALAGQ---VPSAGVGTCFSRRAVTALLEDGDGIAFDVQSL---TEDYDIGFRLKEKGMRE 275 (727)
T ss_pred --HHHHH-HhhhhhHHH--HHcCCC---cccCCceEEEecccHHHHHHhcCCCCcCCCcc---hHHHHHHHHHHHCCCEE
Confidence 01100 000000000 011111 1466778889 66 4688888 6888875 79999999999999999
Q ss_pred EEecceE
Q psy10463 417 EIAPCSH 423 (605)
Q Consensus 417 ~~~p~s~ 423 (605)
.+.|...
T Consensus 276 ~f~~~~v 282 (727)
T PRK11234 276 IFVRFPV 282 (727)
T ss_pred EEccccc
Confidence 9999544
No 80
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=99.55 E-value=1.9e-14 Score=148.93 Aligned_cols=99 Identities=24% Similarity=0.249 Sum_probs=83.3
Q ss_pred CCCcEEEEEEeecCchHHHHHHHHHHH---hcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchH
Q psy10463 88 FLPKSSIVIVFHNEAWSALLRTVHSVI---SRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLI 164 (605)
Q Consensus 88 ~~p~~Siiip~yN~~~~~l~~~l~sv~---~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~ 164 (605)
.++++|||||+|||+ +.|.++++++. .|...+ +|||||||||+|+|.+ +++++.+....+++.+....|.|.+
T Consensus 4 ~~~~vSVVIP~yNE~-~~i~~~l~~l~~~~~~~~~~--~EIIvVDDgS~D~T~~-il~~~~~~~~~~v~~i~~~~n~G~~ 79 (325)
T PRK10714 4 PIKKVSVVIPVYNEQ-ESLPELIRRTTAACESLGKE--YEILLIDDGSSDNSAE-MLVEAAQAPDSHIVAILLNRNYGQH 79 (325)
T ss_pred CCCeEEEEEcccCch-hhHHHHHHHHHHHHHhCCCC--EEEEEEeCCCCCcHHH-HHHHHHhhcCCcEEEEEeCCCCCHH
Confidence 467899999999999 99999888764 455444 7999999999999954 4556555555678888888999999
Q ss_pred HHHHHHhhhccCceEEEecCcccccc
Q psy10463 165 KARLLGARQAEGEILVFLDAHCECTL 190 (605)
Q Consensus 165 ~a~n~g~~~a~g~~i~~lD~d~~~~~ 190 (605)
.|.+.|++.|+||+++++|+|+..++
T Consensus 80 ~A~~~G~~~A~gd~vv~~DaD~q~~p 105 (325)
T PRK10714 80 SAIMAGFSHVTGDLIITLDADLQNPP 105 (325)
T ss_pred HHHHHHHHhCCCCEEEEECCCCCCCH
Confidence 99999999999999999999998764
No 81
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.55 E-value=2.1e-14 Score=137.80 Aligned_cols=96 Identities=34% Similarity=0.370 Sum_probs=85.2
Q ss_pred CCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHH
Q psy10463 89 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARL 168 (605)
Q Consensus 89 ~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n 168 (605)
+|.+|||||+||++ ..|.++|.|+++|++.+ +|||||||||+|+|.. ++.++.+.. ..+.......+.|.+.|+|
T Consensus 2 ~~~~siiip~~n~~-~~l~~~l~s~~~q~~~~--~eiivvddgs~d~t~~-~~~~~~~~~-~~~~~~~~~~~~g~~~~~~ 76 (291)
T COG0463 2 MPKVSVVIPTYNEE-EYLPEALESLLNQTYKD--FEIIVVDDGSTDGTTE-IAIEYGAKD-VRVIRLINERNGGLGAARN 76 (291)
T ss_pred CccEEEEEeccchh-hhHHHHHHHHHhhhhcc--eEEEEEeCCCCCChHH-HHHHHhhhc-ceEEEeecccCCChHHHHH
Confidence 68999999999999 99999999999999988 8999999999999844 455555444 4577788899999999999
Q ss_pred HHhhhccCceEEEecCcccccc
Q psy10463 169 LGARQAEGEILVFLDAHCECTL 190 (605)
Q Consensus 169 ~g~~~a~g~~i~~lD~d~~~~~ 190 (605)
.|+..+.|+++.++|+|+. .+
T Consensus 77 ~~~~~~~~~~~~~~d~d~~-~~ 97 (291)
T COG0463 77 AGLEYARGDYIVFLDADDQ-HP 97 (291)
T ss_pred hhHHhccCCEEEEEccCCC-CC
Confidence 9999999999999999997 64
No 82
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=99.54 E-value=2.6e-14 Score=154.75 Aligned_cols=99 Identities=25% Similarity=0.290 Sum_probs=88.1
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHH
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKA 166 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a 166 (605)
...|.+|||||+|||+ ..|.+||+|+++|+|++ +|||||||||+|+|. +.++++.++. +++++++.++|.|++.|
T Consensus 72 ~~~p~vsViIP~yNE~-~~i~~~l~sll~q~yp~--~eIivVdDgs~D~t~-~~~~~~~~~~-~~v~vv~~~~n~Gka~A 146 (444)
T PRK14583 72 KGHPLVSILVPCFNEG-LNARETIHAALAQTYTN--IEVIAINDGSSDDTA-QVLDALLAED-PRLRVIHLAHNQGKAIA 146 (444)
T ss_pred CCCCcEEEEEEeCCCH-HHHHHHHHHHHcCCCCC--eEEEEEECCCCccHH-HHHHHHHHhC-CCEEEEEeCCCCCHHHH
Confidence 4578999999999999 89999999999999997 799999999999985 4456665554 46999999999999999
Q ss_pred HHHHhhhccCceEEEecCcccccc
Q psy10463 167 RLLGARQAEGEILVFLDAHCECTL 190 (605)
Q Consensus 167 ~n~g~~~a~g~~i~~lD~d~~~~~ 190 (605)
+|.|+..++||+++++|+|+.+.+
T Consensus 147 lN~gl~~a~~d~iv~lDAD~~~~~ 170 (444)
T PRK14583 147 LRMGAAAARSEYLVCIDGDALLDK 170 (444)
T ss_pred HHHHHHhCCCCEEEEECCCCCcCH
Confidence 999999999999999999998764
No 83
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=99.54 E-value=2.2e-14 Score=146.95 Aligned_cols=105 Identities=21% Similarity=0.227 Sum_probs=80.6
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEE-eecCCCcchHH
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRV-IRSPGRVGLIK 165 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~-~~~~~~~G~~~ 165 (605)
...|++|||||+|||+ ..|.++|+|+.+|.+....+|||||||||+|+|.+ ++.++....-....+ ..++.|.|++.
T Consensus 28 ~~~~~vSVVIPayNee-~~I~~~l~sl~~~~~~~~~~EIIVVDDgStD~T~~-ia~~~~~~v~~~~~~~~~~~~n~Gkg~ 105 (306)
T PRK13915 28 KAGRTVSVVLPALNEE-ETVGKVVDSIRPLLMEPLVDELIVIDSGSTDATAE-RAAAAGARVVSREEILPELPPRPGKGE 105 (306)
T ss_pred cCCCCEEEEEecCCcH-HHHHHHHHHHHHHhccCCCcEEEEEeCCCccHHHH-HHHHhcchhhcchhhhhccccCCCHHH
Confidence 3468999999999999 99999999999987533347999999999999854 333332111111111 22477899999
Q ss_pred HHHHHhhhccCceEEEecCccc-cccccc
Q psy10463 166 ARLLGARQAEGEILVFLDAHCE-CTLVFN 193 (605)
Q Consensus 166 a~n~g~~~a~g~~i~~lD~d~~-~~~~~~ 193 (605)
|.|.|+..++|++++|+|+|+. ..+.|.
T Consensus 106 A~~~g~~~a~gd~vv~lDaD~~~~~p~~l 134 (306)
T PRK13915 106 ALWRSLAATTGDIVVFVDADLINFDPMFV 134 (306)
T ss_pred HHHHHHHhcCCCEEEEEeCccccCCHHHH
Confidence 9999999999999999999996 665554
No 84
>PRK11204 N-glycosyltransferase; Provisional
Probab=99.54 E-value=2.8e-14 Score=153.78 Aligned_cols=100 Identities=24% Similarity=0.255 Sum_probs=88.3
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHH
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKA 166 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a 166 (605)
...|.+|||||+|||+ +.|.+||+|+++|++++ +|||||||||+|+|. +.++++.++. +++++++.++|.|++.|
T Consensus 51 ~~~p~vsViIp~yne~-~~i~~~l~sl~~q~yp~--~eiiVvdD~s~d~t~-~~l~~~~~~~-~~v~~i~~~~n~Gka~a 125 (420)
T PRK11204 51 KEYPGVSILVPCYNEG-ENVEETISHLLALRYPN--YEVIAINDGSSDNTG-EILDRLAAQI-PRLRVIHLAENQGKANA 125 (420)
T ss_pred CCCCCEEEEEecCCCH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCccHH-HHHHHHHHhC-CcEEEEEcCCCCCHHHH
Confidence 4578999999999999 99999999999999996 799999999999984 4455655544 46999999999999999
Q ss_pred HHHHhhhccCceEEEecCccccccc
Q psy10463 167 RLLGARQAEGEILVFLDAHCECTLV 191 (605)
Q Consensus 167 ~n~g~~~a~g~~i~~lD~d~~~~~~ 191 (605)
+|.|++.+++|+++++|+|+.+.++
T Consensus 126 ln~g~~~a~~d~i~~lDaD~~~~~d 150 (420)
T PRK11204 126 LNTGAAAARSEYLVCIDGDALLDPD 150 (420)
T ss_pred HHHHHHHcCCCEEEEECCCCCCChh
Confidence 9999999999999999999987643
No 85
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=99.54 E-value=9.1e-14 Score=155.30 Aligned_cols=210 Identities=13% Similarity=0.012 Sum_probs=137.2
Q ss_pred ccCCcceEEEEeechhhH----HHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHH---HHHHHHHHCC--CCEEEEeC
Q psy10463 195 EFLPKSSIVIVFHNEAWS----ALLRTVHSVISRSPRSMLKEILLVDDASTREFLKS---SLDEYVAKLS--VPTRVIRS 265 (605)
Q Consensus 195 ~~~p~vSVIIp~~n~~~~----~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~---~l~~~~~~~~--~~v~~i~~ 265 (605)
+..|+|+|+||+|||+.. .+..+++|+.++.++. .+||+|+||+++++.... .++++.++++ .++.+.+.
T Consensus 121 ~~~~~VaVliP~yNEd~~~v~~~L~a~~~Sl~~~~~~~-~~e~~vLdD~~d~~~~~~e~~~~~~L~~~~~~~~~i~yr~R 199 (691)
T PRK05454 121 PPEARTAILMPIYNEDPARVFAGLRAMYESLAATGHGA-HFDFFILSDTRDPDIAAAEEAAWLELRAELGGEGRIFYRRR 199 (691)
T ss_pred CCCCceEEEEeCCCCChHHHHHHHHHHHHHHHhcCCCC-CEEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCcEEEEEC
Confidence 457899999999999832 5888889999887654 389999999998874321 2445566553 37888887
Q ss_pred CCCCCh-HHHHHHHHhh--ccCCEEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCCeeEEecccccceeee
Q psy10463 266 PGRVGL-IKARLLGARQ--AEGEILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDVTFAYVRSFELHWGAF 341 (605)
Q Consensus 266 ~~n~G~-~~arN~G~~~--A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~ 341 (605)
..|.|. +++.|.+++. +++||++++|+|..+.+++|.+++..++.++. +++......++.+++-
T Consensus 200 ~~n~~~KaGNl~~~~~~~~~~~eyivvLDADs~m~~d~L~~lv~~m~~dP~vGlVQt~~~~~n~~slf------------ 267 (691)
T PRK05454 200 RRNVGRKAGNIADFCRRWGGAYDYMVVLDADSLMSGDTLVRLVRLMEANPRAGLIQTLPVAVGADTLF------------ 267 (691)
T ss_pred CcCCCccHHHHHHHHHhcCCCcCEEEEEcCCCCCCHHHHHHHHHHHhhCcCEEEEeCCccCcCCCCHH------------
Confidence 777775 3334445776 56699999999999999999999999986654 5554222122222110
Q ss_pred eccceeeEeecCchhHhh--hccCCCCccccccccceEEEEeHHHHhHhCCCCc--ccccc----cchhhHHHHHHHHcC
Q psy10463 342 NWELHFRWYTYGSSDAII--KRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDE--EMQVW----GGENLEMSFRVWQCG 413 (605)
Q Consensus 342 ~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe--~~~~~----g~ED~dl~~Rl~~~G 413 (605)
. ++.......+.. ..+............|.+.++||+.|.++||+.. +...| -.||++.+.+++..|
T Consensus 268 a-----R~qqf~~~~y~~~~~~G~~~w~~~~g~f~G~naIiR~~af~~~~glp~L~g~~p~~~~~LseD~~~a~~l~~~G 342 (691)
T PRK05454 268 A-----RLQQFATRVYGPLFAAGLAWWQGGEGNYWGHNAIIRVKAFAEHCGLPPLPGRGPFGGHILSHDFVEAALMRRAG 342 (691)
T ss_pred H-----HHHHHHHHHHHHHHHhhhhhhccCccccccceEEEEHHHHHHhcCCccccccCCCCCCcccHHHHHHHHHHHCC
Confidence 0 000000000000 0000000001224668889999999999876532 22222 258999999999999
Q ss_pred CeEEEecce
Q psy10463 414 GSIEIAPCS 422 (605)
Q Consensus 414 ~~i~~~p~s 422 (605)
+++.++|+.
T Consensus 343 yrV~~~pd~ 351 (691)
T PRK05454 343 WGVWLAPDL 351 (691)
T ss_pred CEEEEcCcc
Confidence 999999984
No 86
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=99.53 E-value=2e-14 Score=140.86 Aligned_cols=94 Identities=26% Similarity=0.340 Sum_probs=81.7
Q ss_pred EEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhhh
Q psy10463 94 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQ 173 (605)
Q Consensus 94 iiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~~ 173 (605)
||||+||++ ..|.++|+|+.+|++ ...+|||||||||+|+|. ++++++.+..+ .+++++++.+.|++.|+|.|++.
T Consensus 1 ViIp~yn~~-~~l~~~l~sl~~q~~-~~~~eiiiVDd~S~d~t~-~~~~~~~~~~~-~i~~~~~~~n~G~~~a~n~g~~~ 76 (224)
T cd06442 1 IIIPTYNER-ENIPELIERLDAALK-GIDYEIIVVDDNSPDGTA-EIVRELAKEYP-RVRLIVRPGKRGLGSAYIEGFKA 76 (224)
T ss_pred CeEeccchh-hhHHHHHHHHHHhhc-CCCeEEEEEeCCCCCChH-HHHHHHHHhCC-ceEEEecCCCCChHHHHHHHHHH
Confidence 699999999 999999999999997 223899999999999984 45666655543 58999999999999999999999
Q ss_pred ccCceEEEecCccccccc
Q psy10463 174 AEGEILVFLDAHCECTLV 191 (605)
Q Consensus 174 a~g~~i~~lD~d~~~~~~ 191 (605)
|.|++++|+|+|+.+.+.
T Consensus 77 a~gd~i~~lD~D~~~~~~ 94 (224)
T cd06442 77 ARGDVIVVMDADLSHPPE 94 (224)
T ss_pred cCCCEEEEEECCCCCCHH
Confidence 999999999999987643
No 87
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=99.53 E-value=1.6e-14 Score=140.41 Aligned_cols=95 Identities=26% Similarity=0.272 Sum_probs=82.7
Q ss_pred EEEEeecCchHHHHHHHHHHHhcCC--ccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHh
Q psy10463 94 IVIVFHNEAWSALLRTVHSVISRSP--RSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGA 171 (605)
Q Consensus 94 iiip~yN~~~~~l~~~l~sv~~~~~--~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~ 171 (605)
||||+||++ ..|.++|+|+++|++ +...+|||||||||+|+| .++++++.+..+..+++++++.|.|++.|+|.|+
T Consensus 1 iiip~yN~~-~~l~~~l~~l~~~~~~~~~~~~eiivvdd~S~D~t-~~~~~~~~~~~~~~i~~i~~~~n~G~~~a~~~g~ 78 (211)
T cd04188 1 VVIPAYNEE-KRLPPTLEEAVEYLEERPSFSYEIIVVDDGSKDGT-AEVARKLARKNPALIRVLTLPKNRGKGGAVRAGM 78 (211)
T ss_pred CEEcccChH-HHHHHHHHHHHHHHhccCCCCEEEEEEeCCCCCch-HHHHHHHHHhCCCcEEEEEcccCCCcHHHHHHHH
Confidence 799999999 999999999999865 122389999999999998 4556777776665579999999999999999999
Q ss_pred hhccCceEEEecCcccccc
Q psy10463 172 RQAEGEILVFLDAHCECTL 190 (605)
Q Consensus 172 ~~a~g~~i~~lD~d~~~~~ 190 (605)
+.|.|+|++++|+|+...+
T Consensus 79 ~~a~gd~i~~ld~D~~~~~ 97 (211)
T cd04188 79 LAARGDYILFADADLATPF 97 (211)
T ss_pred HHhcCCEEEEEeCCCCCCH
Confidence 9999999999999998764
No 88
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.53 E-value=3.2e-14 Score=136.36 Aligned_cols=91 Identities=26% Similarity=0.283 Sum_probs=79.1
Q ss_pred EEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhh
Q psy10463 93 SIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGAR 172 (605)
Q Consensus 93 Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~ 172 (605)
|||||+||++ +.|.+||.|+++|++++ +|||||||||+|+|. ++++++... +.++...++.|.+.|+|.|++
T Consensus 1 sivi~~~n~~-~~l~~~l~sl~~q~~~~--~evivvDd~s~d~~~-~~~~~~~~~----~~~~~~~~~~g~~~a~n~~~~ 72 (202)
T cd06433 1 SIITPTYNQA-ETLEETIDSVLSQTYPN--IEYIVIDGGSTDGTV-DIIKKYEDK----ITYWISEPDKGIYDAMNKGIA 72 (202)
T ss_pred CEEEeccchH-HHHHHHHHHHHhCCCCC--ceEEEEeCCCCccHH-HHHHHhHhh----cEEEEecCCcCHHHHHHHHHH
Confidence 7999999999 99999999999999987 899999999999984 344544332 556677889999999999999
Q ss_pred hccCceEEEecCccccccc
Q psy10463 173 QAEGEILVFLDAHCECTLV 191 (605)
Q Consensus 173 ~a~g~~i~~lD~d~~~~~~ 191 (605)
.|+++|++++|+|+.+.+.
T Consensus 73 ~a~~~~v~~ld~D~~~~~~ 91 (202)
T cd06433 73 LATGDIIGFLNSDDTLLPG 91 (202)
T ss_pred HcCCCEEEEeCCCcccCch
Confidence 9999999999999988643
No 89
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.52 E-value=7.1e-14 Score=134.05 Aligned_cols=107 Identities=34% Similarity=0.321 Sum_probs=93.9
Q ss_pred CCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHH
Q psy10463 197 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARL 276 (605)
Q Consensus 197 ~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN 276 (605)
+|++|||||+||++ ..|.++|.|+++|++.. +|||||||||+|++.. .++++....+ ++.......+.|.+.|+|
T Consensus 2 ~~~~siiip~~n~~-~~l~~~l~s~~~q~~~~--~eiivvddgs~d~t~~-~~~~~~~~~~-~~~~~~~~~~~g~~~~~~ 76 (291)
T COG0463 2 MPKVSVVIPTYNEE-EYLPEALESLLNQTYKD--FEIIVVDDGSTDGTTE-IAIEYGAKDV-RVIRLINERNGGLGAARN 76 (291)
T ss_pred CccEEEEEeccchh-hhHHHHHHHHHhhhhcc--eEEEEEeCCCCCChHH-HHHHHhhhcc-eEEEeecccCCChHHHHH
Confidence 68999999999999 99999999999999877 7999999999998544 6777766543 577777889999999999
Q ss_pred HHHhhccCCEEEEecCCcccCcChHHHHHHHHH
Q psy10463 277 LGARQAEGEILVFLDAHCECTLGWLENLVARVA 309 (605)
Q Consensus 277 ~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~ 309 (605)
.|+..+.|++++|+|+|+. .+..+..++....
T Consensus 77 ~~~~~~~~~~~~~~d~d~~-~~~~~~~~~~~~~ 108 (291)
T COG0463 77 AGLEYARGDYIVFLDADDQ-HPPELIPLVAAGG 108 (291)
T ss_pred hhHHhccCCEEEEEccCCC-CCHHHHHHHHHhh
Confidence 9999999999999999999 9998888555544
No 90
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=99.52 E-value=6.5e-14 Score=148.23 Aligned_cols=103 Identities=15% Similarity=0.160 Sum_probs=86.8
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCC-CeEEeecCCCcc---
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSV-PTRVIRSPGRVG--- 162 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~-~v~~~~~~~~~G--- 162 (605)
...|.+|||||+|||+ +.|.+||+|+++|+|++ +||||+||+|+|.|. ++++++.++++. +++++..+.+.|
T Consensus 38 ~~~p~VSViiP~~nee-~~l~~~L~Sl~~q~Yp~--~EIivvdd~s~D~t~-~iv~~~~~~~p~~~i~~v~~~~~~G~~~ 113 (373)
T TIGR03472 38 RAWPPVSVLKPLHGDE-PELYENLASFCRQDYPG--FQMLFGVQDPDDPAL-AVVRRLRADFPDADIDLVIDARRHGPNR 113 (373)
T ss_pred CCCCCeEEEEECCCCC-hhHHHHHHHHHhcCCCC--eEEEEEeCCCCCcHH-HHHHHHHHhCCCCceEEEECCCCCCCCh
Confidence 4478999999999999 99999999999999998 899999999999985 567777777654 488887776666
Q ss_pred hHHHHHHHhhhccCceEEEecCccccccccc
Q psy10463 163 LIKARLLGARQAEGEILVFLDAHCECTLVFN 193 (605)
Q Consensus 163 ~~~a~n~g~~~a~g~~i~~lD~d~~~~~~~~ 193 (605)
+..+.+.+++.|+||+++|+|+|+.+.++|+
T Consensus 114 K~~~l~~~~~~a~ge~i~~~DaD~~~~p~~L 144 (373)
T TIGR03472 114 KVSNLINMLPHARHDILVIADSDISVGPDYL 144 (373)
T ss_pred HHHHHHHHHHhccCCEEEEECCCCCcChhHH
Confidence 4455666789999999999999998876654
No 91
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=99.50 E-value=1.6e-13 Score=135.29 Aligned_cols=85 Identities=27% Similarity=0.269 Sum_probs=74.6
Q ss_pred cEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHH
Q psy10463 91 KSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLG 170 (605)
Q Consensus 91 ~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g 170 (605)
++|||||+||++ ..|.+||+|+..|+ .|||||||||+|+|.+ ++++ ..++++.. .+.|++.++|.|
T Consensus 1 ~isvii~~~Ne~-~~l~~~l~sl~~~~-----~eiivvD~gStD~t~~-i~~~------~~~~v~~~-~~~g~~~~~n~~ 66 (229)
T cd02511 1 TLSVVIITKNEE-RNIERCLESVKWAV-----DEIIVVDSGSTDRTVE-IAKE------YGAKVYQR-WWDGFGAQRNFA 66 (229)
T ss_pred CEEEEEEeCCcH-HHHHHHHHHHhccc-----CEEEEEeCCCCccHHH-HHHH------cCCEEEEC-CCCChHHHHHHH
Confidence 489999999999 99999999999885 5999999999999843 2332 25788877 889999999999
Q ss_pred hhhccCceEEEecCccccc
Q psy10463 171 ARQAEGEILVFLDAHCECT 189 (605)
Q Consensus 171 ~~~a~g~~i~~lD~d~~~~ 189 (605)
+..|+++|++++|+|+.+.
T Consensus 67 ~~~a~~d~vl~lDaD~~~~ 85 (229)
T cd02511 67 LELATNDWVLSLDADERLT 85 (229)
T ss_pred HHhCCCCEEEEEeCCcCcC
Confidence 9999999999999999876
No 92
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=99.47 E-value=1.6e-13 Score=129.84 Aligned_cols=96 Identities=28% Similarity=0.301 Sum_probs=80.2
Q ss_pred EEEEeecCchHHHHHHHHHHHhcCCc-cCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhh
Q psy10463 94 IVIVFHNEAWSALLRTVHSVISRSPR-SMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGAR 172 (605)
Q Consensus 94 iiip~yN~~~~~l~~~l~sv~~~~~~-~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~ 172 (605)
||||+||++ +.|.++|+|+..+..+ ...+|||||||||+|+|. ++++++.++.+ .++++...+|.|.+.|+|.|++
T Consensus 1 viIp~~n~~-~~l~~~l~sl~~~~~~~~~~~eiivvdd~s~d~t~-~~~~~~~~~~~-~i~~i~~~~n~G~~~a~n~g~~ 77 (181)
T cd04187 1 IVVPVYNEE-ENLPELYERLKAVLESLGYDYEIIFVDDGSTDRTL-EILRELAARDP-RVKVIRLSRNFGQQAALLAGLD 77 (181)
T ss_pred CEEeecCch-hhHHHHHHHHHHHHHhcCCCeEEEEEeCCCCccHH-HHHHHHHhhCC-CEEEEEecCCCCcHHHHHHHHH
Confidence 699999999 9999998888766542 223799999999999984 45666655543 6899999999999999999999
Q ss_pred hccCceEEEecCcccccccc
Q psy10463 173 QAEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 173 ~a~g~~i~~lD~d~~~~~~~ 192 (605)
.|+|+|++++|+|+...+.|
T Consensus 78 ~a~~d~i~~~D~D~~~~~~~ 97 (181)
T cd04187 78 HARGDAVITMDADLQDPPEL 97 (181)
T ss_pred hcCCCEEEEEeCCCCCCHHH
Confidence 99999999999999886544
No 93
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=99.46 E-value=1.4e-13 Score=127.98 Aligned_cols=95 Identities=31% Similarity=0.348 Sum_probs=82.7
Q ss_pred EEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhhh
Q psy10463 94 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQ 173 (605)
Q Consensus 94 iiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~~ 173 (605)
||||+||++ +.|.+||+|+++|+++. +|||||||+|+|.|.. .+.++.......+.++...++.|++.++|.|++.
T Consensus 1 Viip~~n~~-~~l~~~l~sl~~q~~~~--~~iivvdd~s~d~t~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~n~~~~~ 76 (180)
T cd06423 1 IIVPAYNEE-AVIERTIESLLALDYPK--LEVIVVDDGSTDDTLE-ILEELAALYIRRVLVVRDKENGGKAGALNAGLRH 76 (180)
T ss_pred CeecccChH-HHHHHHHHHHHhCCCCc--eEEEEEeCCCccchHH-HHHHHhccccceEEEEEecccCCchHHHHHHHHh
Confidence 699999999 99999999999999865 8999999999999854 4555555544557889999999999999999999
Q ss_pred ccCceEEEecCcccccccc
Q psy10463 174 AEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 174 a~g~~i~~lD~d~~~~~~~ 192 (605)
+++++++++|+|+.+.+.|
T Consensus 77 ~~~~~i~~~D~D~~~~~~~ 95 (180)
T cd06423 77 AKGDIVVVLDADTILEPDA 95 (180)
T ss_pred cCCCEEEEECCCCCcChHH
Confidence 9999999999999876443
No 94
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.46 E-value=2e-13 Score=133.95 Aligned_cols=96 Identities=26% Similarity=0.338 Sum_probs=80.5
Q ss_pred EEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHh-cCCCeEEeecC--CCcchHHHHHHH
Q psy10463 94 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAK-LSVPTRVIRSP--GRVGLIKARLLG 170 (605)
Q Consensus 94 iiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~-~~~~v~~~~~~--~~~G~~~a~n~g 170 (605)
||||+||++ +.|.+||+|++.|++++..+|||||||||+|+|.+ .++ +... ....++++..+ .+.|...++|.|
T Consensus 1 viip~~n~~-~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~-~~~-~~~~~~~~~v~~~~~~~~~~~g~~~a~n~g 77 (229)
T cd04192 1 VVIAARNEA-ENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQ-ILE-FAAAKPNFQLKILNNSRVSISGKKNALTTA 77 (229)
T ss_pred CEEEecCcH-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHH-HHH-HHHhCCCcceEEeeccCcccchhHHHHHHH
Confidence 799999999 99999999999999987557999999999999854 344 3333 23457888776 578999999999
Q ss_pred hhhccCceEEEecCcccccccc
Q psy10463 171 ARQAEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 171 ~~~a~g~~i~~lD~d~~~~~~~ 192 (605)
+..++++|++++|+|+.+.++|
T Consensus 78 ~~~~~~d~i~~~D~D~~~~~~~ 99 (229)
T cd04192 78 IKAAKGDWIVTTDADCVVPSNW 99 (229)
T ss_pred HHHhcCCEEEEECCCcccCHHH
Confidence 9999999999999999776543
No 95
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=99.45 E-value=3e-13 Score=127.88 Aligned_cols=95 Identities=25% Similarity=0.383 Sum_probs=77.9
Q ss_pred EEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEE-eecCCCcchHHHHHHHhh
Q psy10463 94 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRV-IRSPGRVGLIKARLLGAR 172 (605)
Q Consensus 94 iiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~-~~~~~~~G~~~a~n~g~~ 172 (605)
||||+||+. +.|.+||+|+.+|++++ +|||||||+|+|.|. +.+.++.+..+.+++. .+...+.|.+.++|.|++
T Consensus 1 ivip~~n~~-~~l~~~l~sl~~q~~~~--~eiivvdd~s~d~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~g~~ 76 (182)
T cd06420 1 LIITTYNRP-EALELVLKSVLNQSILP--FEVIIADDGSTEETK-ELIEEFKSQFPIPIKHVWQEDEGFRKAKIRNKAIA 76 (182)
T ss_pred CEEeecCCh-HHHHHHHHHHHhccCCC--CEEEEEeCCCchhHH-HHHHHHHhhcCCceEEEEcCCcchhHHHHHHHHHH
Confidence 699999999 99999999999999876 799999999999984 4566665554444443 444445678899999999
Q ss_pred hccCceEEEecCcccccccc
Q psy10463 173 QAEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 173 ~a~g~~i~~lD~d~~~~~~~ 192 (605)
.|+|+|++++|+|+.+.+.|
T Consensus 77 ~a~g~~i~~lD~D~~~~~~~ 96 (182)
T cd06420 77 AAKGDYLIFIDGDCIPHPDF 96 (182)
T ss_pred HhcCCEEEEEcCCcccCHHH
Confidence 99999999999999876543
No 96
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=99.45 E-value=1.3e-12 Score=126.88 Aligned_cols=186 Identities=17% Similarity=0.183 Sum_probs=101.5
Q ss_pred ceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHH
Q psy10463 200 SSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGA 279 (605)
Q Consensus 200 vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~ 279 (605)
||||++..|+. .+.+|+.++.++..+. .|+|-+|+- ....+.+.|.|.|+
T Consensus 1 isiI~c~n~~~--~~~~~~~~i~~~~~~~--~~~i~i~~~--------------------------~~~~s~~~~yN~a~ 50 (217)
T PF13712_consen 1 ISIIICVNDEE--LYEECLRSIKRLIGPP--GELIEIDNV--------------------------RNAKSMAAAYNEAM 50 (217)
T ss_dssp EEEEEEES-HH--HHHHHHHHHHHTT--T--EEEEEEE-S--------------------------SS-S-TTTHHHHHG
T ss_pred CEEEEEECCHH--HHHHHHHHHHhhCCCC--ceEEEEecc--------------------------CCCcCHHHHHHHHH
Confidence 46777666664 7888999988886555 577766542 12267889999999
Q ss_pred hhccCCEEEEecCCccc-CcChHHHHHHHHHcCCc-EEEe---eeEeeecCCeeEEecccccceeeeecc-ceeeE--ee
Q psy10463 280 RQAEGEILVFLDAHCEC-TLGWLENLVARVAEDRT-RVVC---PVIDIISDVTFAYVRSFELHWGAFNWE-LHFRW--YT 351 (605)
Q Consensus 280 ~~A~gd~i~flD~D~~~-~~~~L~~ll~~~~~~~~-~vv~---p~i~~i~~~~~~~~~~~~~~~g~~~~~-l~~~~--~~ 351 (605)
++|+++|++|++.|+.+ +++|++.+++.+++++. +++| +.....++..+.- ....+. ..... ..
T Consensus 51 ~~a~~~ylvflHqDv~i~~~~~l~~il~~~~~~~~~G~iGvaG~~~~~~~~~~w~~--------~~~~g~~~~~~~~~~~ 122 (217)
T PF13712_consen 51 EKAKAKYLVFLHQDVFIINENWLEDILEIFEEDPNIGMIGVAGSKRLPPNGVWWES--------PNKVGKVREYGRIMHG 122 (217)
T ss_dssp GG--SSEEEEEETTEE-SSHHHHHHHHHHHHH-TTEEEEESEEEESS-S-TTS-----------EEEEEETTEEEE----
T ss_pred HhCCCCEEEEEeCCeEEcchhHHHHHHHHHhhCCCccEEEeecCCcCCCCCccccc--------cccccccccccccccc
Confidence 99999999999999987 68999999999966665 3333 2211111111100 000000 00000 00
Q ss_pred cCchhHhh-hccC--CCCccccccccceEEEEeHHHHhHhCCCCcc-cccccchhhHHHHHHHHcCCeEEEecceEEEEE
Q psy10463 352 YGSSDAII-KRKD--FTEPFKTPAMAGGLFAIDRAYFFHIGAYDEE-MQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHL 427 (605)
Q Consensus 352 ~~~~~~~~-~~~~--~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~-~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~ 427 (605)
.+...... .... ...+.++.++.|.+|+++|+++ +|||. +..|-+-|+|+|++++++|+++.. +...+.|.
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~V~avDg~ll~~~~dv~----~fde~~~~gfH~Ydvd~cl~~~~~G~~v~~-~~~~~~H~ 197 (217)
T PF13712_consen 123 HGPNSAGEVRYGGPRNDPPEEVQAVDGLLLATQKDVP----RFDEDLFTGFHFYDVDQCLEARRAGYRVVV-PPPWCIHF 197 (217)
T ss_dssp E-------------ES-SSEEEEEE-TTEEEEETTB---------SS--SSSSHHHHHHHHHHHTT-EEEE------EE-
T ss_pred ccccccccccccccccCCceeEEEecceEEEEEcccC----CCCccccCCcchHHHHHHHHHHHhCCEEEe-cCceEEEc
Confidence 01000000 0001 1245667789999999999999 99999 777888999999999999999955 44667776
Q ss_pred c
Q psy10463 428 F 428 (605)
Q Consensus 428 ~ 428 (605)
-
T Consensus 198 s 198 (217)
T PF13712_consen 198 S 198 (217)
T ss_dssp S
T ss_pred C
Confidence 4
No 97
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=99.44 E-value=4.2e-13 Score=133.44 Aligned_cols=98 Identities=29% Similarity=0.367 Sum_probs=82.4
Q ss_pred cEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHH
Q psy10463 91 KSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLG 170 (605)
Q Consensus 91 ~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g 170 (605)
++|||||+||++ +.|.++|+|+.+|+++...+|||||||+|+|+|. +.++++.+. .+.++++.++ +.|.+.|+|.|
T Consensus 1 ~~sIiip~~n~~-~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~-~~~~~~~~~-~~~v~~i~~~-~~~~~~a~N~g 76 (249)
T cd02525 1 FVSIIIPVRNEE-KYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTR-EIVQEYAAK-DPRIRLIDNP-KRIQSAGLNIG 76 (249)
T ss_pred CEEEEEEcCCch-hhHHHHHHHHHhccCCCCccEEEEEeCCCCccHH-HHHHHHHhc-CCeEEEEeCC-CCCchHHHHHH
Confidence 489999999999 9999999999999986444899999999999984 445555444 4458888765 46899999999
Q ss_pred hhhccCceEEEecCcccccccc
Q psy10463 171 ARQAEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 171 ~~~a~g~~i~~lD~d~~~~~~~ 192 (605)
++.|+++|++++|+|+.+.+.|
T Consensus 77 ~~~a~~d~v~~lD~D~~~~~~~ 98 (249)
T cd02525 77 IRNSRGDIIIRVDAHAVYPKDY 98 (249)
T ss_pred HHHhCCCEEEEECCCccCCHHH
Confidence 9999999999999999876544
No 98
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.44 E-value=1.8e-12 Score=143.88 Aligned_cols=197 Identities=14% Similarity=0.160 Sum_probs=131.9
Q ss_pred ccCCcceEEEEeechhhHHHHHHHHHHH-hcCCCCCceeEEE---eeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCC--
Q psy10463 195 EFLPKSSIVIVFHNEAWSALLRTVHSVI-SRSPRSMLKEILL---VDDASTREFLKSSLDEYVAKLSVPTRVIRSPGR-- 268 (605)
Q Consensus 195 ~~~p~vSVIIp~~n~~~~~l~~~l~sl~-~q~~~~~~~eIIv---VDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n-- 268 (605)
...|.+||+||.|||+ ..+.++|++++ +.+||. +||+| +||+.|.. .++++...+| +++++..+.+
T Consensus 68 ~~~~~vsIlVPa~nE~-~VI~~~v~~ll~~ldYp~--~~I~v~~~~nD~~T~~----~~~~~~~~~p-~~~~v~~~~~gp 139 (703)
T PRK15489 68 RDEQPLAIMVPAWKEY-DVIAKMIENMLATLDYRR--YVIFVGTYPNDAETIT----EVERMRRRYK-RLVRVEVPHDGP 139 (703)
T ss_pred cCCCceEEEEeCCCcH-HHHHHHHHHHHhcCCCCC--eEEEEEecCCCccHHH----HHHHHhccCC-cEEEEEcCCCCC
Confidence 3468999999999999 99999999987 568886 69988 46665443 5667777777 7877766554
Q ss_pred CChHHHHHHHHhhc-------cCCE--EEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEeccccccee
Q psy10463 269 VGLIKARLLGARQA-------EGEI--LVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWG 339 (605)
Q Consensus 269 ~G~~~arN~G~~~A-------~gd~--i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g 339 (605)
.|.+.|.|.|+..+ .++| +++.|+|+.++|+.|..+ +.+..++..+.+|+....+..+ ... .+
T Consensus 140 ~gKa~ALN~~l~~~~~~e~~~~~~fa~vvi~DAEd~~~P~~L~~~-~~~~~~~~~iQ~pV~~~~~~~~-~~l------~~ 211 (703)
T PRK15489 140 TCKADCLNWIIQAIFRYEAGHGIEFAGVILHDSEDVLHPLELKYF-NYLLPRKDLVQLPVLSLERKWY-EWV------AG 211 (703)
T ss_pred CCHHHHHHHHHHHHHhhhhhccCccceEEEEcCCCCCChhHHHHH-HhhcCCcceeeeeeccCCCccc-cHH------HH
Confidence 78999999999875 3444 899999999999999766 5655555666666543221110 000 01
Q ss_pred eeeccceeeEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHh---CC---CCcccccccchhhHHHHHHHHcC
Q psy10463 340 AFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHI---GA---YDEEMQVWGGENLEMSFRVWQCG 413 (605)
Q Consensus 340 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~i---Gg---fDe~~~~~g~ED~dl~~Rl~~~G 413 (605)
.+.-+ | ..........+ .....++ ..+|..++++|++++++ || ||.+.- -||.|+++|+.+.|
T Consensus 212 ~~~~E--f--a~~~~~~l~~r-~~l~~~i---pl~Gv~~~frr~aL~~l~~~gg~~~~n~~sL---TED~Dlg~RL~~~G 280 (703)
T PRK15489 212 TYMDE--F--AEWHQKDLVVR-ESLTGTV---PSAGVGTCFSRRALLALMKERGNQPFNTSSL---TEDYDFSFRLAELG 280 (703)
T ss_pred HHHHH--H--HHHhhhHHHHH-HHcCCce---eccCcceeeeHHHHHHHHHhcCCCCCCCCCc---hHhHHHHHHHHHCC
Confidence 00000 0 00001011111 1122222 25666888999998887 54 665553 69999999999999
Q ss_pred CeEEE
Q psy10463 414 GSIEI 418 (605)
Q Consensus 414 ~~i~~ 418 (605)
++..+
T Consensus 281 ~r~~f 285 (703)
T PRK15489 281 MQEIF 285 (703)
T ss_pred CceEE
Confidence 99888
No 99
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=99.43 E-value=3.6e-13 Score=127.87 Aligned_cols=93 Identities=24% Similarity=0.190 Sum_probs=76.3
Q ss_pred EEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhhh
Q psy10463 94 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQ 173 (605)
Q Consensus 94 iiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~~ 173 (605)
||||+|||+ +.|.++|+|+.+|+++...+|||||||||+|+|.+. +++....+.+.....+.|++.|+|.|+..
T Consensus 1 VvIp~~ne~-~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~t~~~-----~~~~~~~~~~~~~~~~~gk~~aln~g~~~ 74 (183)
T cd06438 1 ILIPAHNEE-AVIGNTVRSLKAQDYPRELYRIFVVADNCTDDTAQV-----ARAAGATVLERHDPERRGKGYALDFGFRH 74 (183)
T ss_pred CEEeccchH-HHHHHHHHHHHhcCCCCcccEEEEEeCCCCchHHHH-----HHHcCCeEEEeCCCCCCCHHHHHHHHHHH
Confidence 799999999 999999999999998654579999999999998542 23333334445557788999999999998
Q ss_pred cc-----CceEEEecCcccccccc
Q psy10463 174 AE-----GEILVFLDAHCECTLVF 192 (605)
Q Consensus 174 a~-----g~~i~~lD~d~~~~~~~ 192 (605)
+. +++++++|+|+.+++.|
T Consensus 75 a~~~~~~~d~v~~~DaD~~~~p~~ 98 (183)
T cd06438 75 LLNLADDPDAVVVFDADNLVDPNA 98 (183)
T ss_pred HHhcCCCCCEEEEEcCCCCCChhH
Confidence 74 99999999999887544
No 100
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=99.43 E-value=3.1e-13 Score=128.12 Aligned_cols=96 Identities=28% Similarity=0.284 Sum_probs=83.1
Q ss_pred EEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhhh
Q psy10463 94 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQ 173 (605)
Q Consensus 94 iiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~~ 173 (605)
||||+||++ +.|.+||+|+.+|.++...+|||||||+|+|+| ...++++.++.+ .++++.++.|.|++.|+|.|++.
T Consensus 1 iii~~~n~~-~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~-~~~~~~~~~~~~-~~~~~~~~~n~G~~~a~n~g~~~ 77 (185)
T cd04179 1 VVIPAYNEE-ENIPELVERLLAVLEEGYDYEIIVVDDGSTDGT-AEIARELAARVP-RVRVIRLSRNFGKGAAVRAGFKA 77 (185)
T ss_pred CeecccChH-hhHHHHHHHHHHHhccCCCEEEEEEcCCCCCCh-HHHHHHHHHhCC-CeEEEEccCCCCccHHHHHHHHH
Confidence 699999998 999999999999987433489999999999987 455666666553 57899999999999999999999
Q ss_pred ccCceEEEecCcccccccc
Q psy10463 174 AEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 174 a~g~~i~~lD~d~~~~~~~ 192 (605)
|.|+|++++|+|+...+.|
T Consensus 78 a~gd~i~~lD~D~~~~~~~ 96 (185)
T cd04179 78 ARGDIVVTMDADLQHPPED 96 (185)
T ss_pred hcCCEEEEEeCCCCCCHHH
Confidence 9999999999999876433
No 101
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=99.42 E-value=8.4e-13 Score=150.31 Aligned_cols=106 Identities=21% Similarity=0.219 Sum_probs=87.6
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhH-------------HHHHHHHHHhcCCCeE
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFL-------------KSSLDEYVAKLSVPTR 153 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~-------------~~~~~~~~~~~~~~v~ 153 (605)
+..|++|||||+|||+.+.+.+||.++++++|+...+||+||||||+|+|. ...++++.++. +++
T Consensus 128 ~~~P~VsViIP~yNE~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~~~~~~~~~~~~l~~~~--~v~ 205 (713)
T TIGR03030 128 EEWPTVDVFIPTYNEDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQAEAAQRREELKEFCRKL--GVN 205 (713)
T ss_pred ccCCeeEEEEcCCCCCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhhhhhhhhhHHHHHHHHHHc--CcE
Confidence 567999999999999956667899999999999655899999999999873 23444554443 588
Q ss_pred EeecCCC-cchHHHHHHHhhhccCceEEEecCcccccccccc
Q psy10463 154 VIRSPGR-VGLIKARLLGARQAEGEILVFLDAHCECTLVFNE 194 (605)
Q Consensus 154 ~~~~~~~-~G~~~a~n~g~~~a~g~~i~~lD~d~~~~~~~~~ 194 (605)
+++.++| .|++++.|.|++.++|||++++|+|+.+.++++.
T Consensus 206 yi~r~~n~~~KAgnLN~al~~a~gd~Il~lDAD~v~~pd~L~ 247 (713)
T TIGR03030 206 YITRPRNVHAKAGNINNALKHTDGELILIFDADHVPTRDFLQ 247 (713)
T ss_pred EEECCCCCCCChHHHHHHHHhcCCCEEEEECCCCCcChhHHH
Confidence 8887766 4679999999999999999999999988766654
No 102
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=99.42 E-value=7.2e-13 Score=130.81 Aligned_cols=95 Identities=19% Similarity=0.211 Sum_probs=78.2
Q ss_pred cEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHH
Q psy10463 91 KSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLG 170 (605)
Q Consensus 91 ~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g 170 (605)
.+|||||+||++.+.|.+||+|+.+|+ . .|||||||+|+|++...+ .+ . ...+.++++ ...+.|+..|+|.|
T Consensus 1 ~isVvIp~~ne~~~~l~~~l~sl~~q~--~--~eiivvdd~s~d~~~~~l-~~-~-~~~~~~~v~-~~~~~g~~~a~n~g 72 (235)
T cd06434 1 DVTVIIPVYDEDPDVFRECLRSILRQK--P--LEIIVVTDGDDEPYLSIL-SQ-T-VKYGGIFVI-TVPHPGKRRALAEG 72 (235)
T ss_pred CeEEEEeecCCChHHHHHHHHHHHhCC--C--CEEEEEeCCCChHHHHHH-Hh-h-ccCCcEEEE-ecCCCChHHHHHHH
Confidence 489999999998899999999999998 2 699999999999985433 11 1 122335555 46789999999999
Q ss_pred hhhccCceEEEecCccccccccc
Q psy10463 171 ARQAEGEILVFLDAHCECTLVFN 193 (605)
Q Consensus 171 ~~~a~g~~i~~lD~d~~~~~~~~ 193 (605)
++.|+|++++++|+|+.+.++|+
T Consensus 73 ~~~a~~d~v~~lD~D~~~~~~~l 95 (235)
T cd06434 73 IRHVTTDIVVLLDSDTVWPPNAL 95 (235)
T ss_pred HHHhCCCEEEEECCCceeChhHH
Confidence 99999999999999998876553
No 103
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.41 E-value=5e-13 Score=128.83 Aligned_cols=93 Identities=18% Similarity=0.166 Sum_probs=78.6
Q ss_pred EEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhhh
Q psy10463 94 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQ 173 (605)
Q Consensus 94 iiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~~ 173 (605)
||||+||++ +.|.+||+|+++|+++. +|||||||||+|.|. ++++++.... +++++..++|.|.+.++|.|+..
T Consensus 1 viI~~~n~~-~~l~~~l~sl~~q~~~~--~eiiivD~~s~d~t~-~~~~~~~~~~--~i~~~~~~~n~g~~~~~n~~~~~ 74 (202)
T cd04185 1 AVVVTYNRL-DLLKECLDALLAQTRPP--DHIIVIDNASTDGTA-EWLTSLGDLD--NIVYLRLPENLGGAGGFYEGVRR 74 (202)
T ss_pred CEEEeeCCH-HHHHHHHHHHHhccCCC--ceEEEEECCCCcchH-HHHHHhcCCC--ceEEEECccccchhhHHHHHHHH
Confidence 699999999 99999999999999886 799999999999984 3344443322 27899999999999999999987
Q ss_pred c---cCceEEEecCcccccccc
Q psy10463 174 A---EGEILVFLDAHCECTLVF 192 (605)
Q Consensus 174 a---~g~~i~~lD~d~~~~~~~ 192 (605)
| .+++++|+|+|+.+.+.|
T Consensus 75 a~~~~~d~v~~ld~D~~~~~~~ 96 (202)
T cd04185 75 AYELGYDWIWLMDDDAIPDPDA 96 (202)
T ss_pred HhccCCCEEEEeCCCCCcChHH
Confidence 6 699999999999886443
No 104
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=99.41 E-value=5.6e-13 Score=127.55 Aligned_cols=92 Identities=21% Similarity=0.215 Sum_probs=75.2
Q ss_pred EEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeec---CCCcchHHHHHHH
Q psy10463 94 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRS---PGRVGLIKARLLG 170 (605)
Q Consensus 94 iiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~---~~~~G~~~a~n~g 170 (605)
||||+|||+ +.|.+||+|+++|+ +. +|||||||+|+|.|.+. ++ + ....+++++++. ..+.|++.|+|.|
T Consensus 1 ViIp~~Ne~-~~l~~~l~sl~~~~-~~--~eIivvdd~S~D~t~~~-~~-~-~~~~~~v~~i~~~~~~~~~Gk~~aln~g 73 (191)
T cd06436 1 VLVPCLNEE-AVIQRTLASLLRNK-PN--FLVLVIDDASDDDTAGI-VR-L-AITDSRVHLLRRHLPNARTGKGDALNAA 73 (191)
T ss_pred CEEeccccH-HHHHHHHHHHHhCC-CC--eEEEEEECCCCcCHHHH-Hh-h-eecCCcEEEEeccCCcCCCCHHHHHHHH
Confidence 799999999 99999999999998 54 79999999999998543 33 2 223356888875 3578999999999
Q ss_pred hhhcc-----------CceEEEecCcccccccc
Q psy10463 171 ARQAE-----------GEILVFLDAHCECTLVF 192 (605)
Q Consensus 171 ~~~a~-----------g~~i~~lD~d~~~~~~~ 192 (605)
++.++ +++++++|+|+.+.+.|
T Consensus 74 ~~~~~~~~~~~g~~~~~d~v~~~DaD~~~~~~~ 106 (191)
T cd06436 74 YDQIRQILIEEGADPERVIIAVIDADGRLDPNA 106 (191)
T ss_pred HHHHhhhccccccCCCccEEEEECCCCCcCHhH
Confidence 99985 37999999999887543
No 105
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=99.40 E-value=1e-12 Score=148.93 Aligned_cols=111 Identities=17% Similarity=0.195 Sum_probs=89.8
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCC-CcchHH
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG-RVGLIK 165 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~-~~G~~~ 165 (605)
+..|+||||||+|||+.+.+.++|.++++++|+...+||+||||||+|++ .+ .+++. .+++++.++ +.|+++
T Consensus 257 ~~~P~VsViIPtYNE~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t-~~----la~~~--~v~yI~R~~n~~gKAG 329 (852)
T PRK11498 257 SLWPTVDIFVPTYNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEF-RQ----FAQEV--GVKYIARPTHEHAKAG 329 (852)
T ss_pred CCCCcEEEEEecCCCcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChHH-HH----HHHHC--CcEEEEeCCCCcchHH
Confidence 45799999999999996677899999999999976689999999999997 22 33333 588887765 457899
Q ss_pred HHHHHhhhccCceEEEecCccccccccccc------cCCcceEEE
Q psy10463 166 ARLLGARQAEGEILVFLDAHCECTLVFNEE------FLPKSSIVI 204 (605)
Q Consensus 166 a~n~g~~~a~g~~i~~lD~d~~~~~~~~~~------~~p~vSVII 204 (605)
+.|.|++.++|||++++|+|+.+.++++.. ..|++.+|-
T Consensus 330 nLN~aL~~a~GEyIavlDAD~ip~pdfL~~~V~~f~~dP~VglVQ 374 (852)
T PRK11498 330 NINNALKYAKGEFVAIFDCDHVPTRSFLQMTMGWFLKDKKLAMMQ 374 (852)
T ss_pred HHHHHHHhCCCCEEEEECCCCCCChHHHHHHHHHHHhCCCeEEEE
Confidence 999999999999999999999887766542 235555554
No 106
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.38 E-value=8.4e-13 Score=128.97 Aligned_cols=90 Identities=30% Similarity=0.316 Sum_probs=75.2
Q ss_pred EEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHh
Q psy10463 92 SSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGA 171 (605)
Q Consensus 92 ~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~ 171 (605)
+|||||+||++ ..|.++|+|+++|++++ +|||||||+|+|+|... +.+ ..++++. .+.|.+.|+|.|+
T Consensus 1 vsvii~~~n~~-~~l~~~l~sl~~q~~~~--~evivvdd~s~d~~~~~-~~~------~~~~~~~--~~~g~~~a~n~g~ 68 (221)
T cd02522 1 LSIIIPTLNEA-ENLPRLLASLRRLNPLP--LEIIVVDGGSTDGTVAI-ARS------AGVVVIS--SPKGRARQMNAGA 68 (221)
T ss_pred CEEEEEccCcH-HHHHHHHHHHHhccCCC--cEEEEEeCCCCccHHHH-Hhc------CCeEEEe--CCcCHHHHHHHHH
Confidence 69999999999 89999999999999855 79999999999998542 222 3455554 4578999999999
Q ss_pred hhccCceEEEecCccccccccc
Q psy10463 172 RQAEGEILVFLDAHCECTLVFN 193 (605)
Q Consensus 172 ~~a~g~~i~~lD~d~~~~~~~~ 193 (605)
..|+|++++++|+|+.+.+.|.
T Consensus 69 ~~a~~~~i~~~D~D~~~~~~~l 90 (221)
T cd02522 69 AAARGDWLLFLHADTRLPPDWD 90 (221)
T ss_pred HhccCCEEEEEcCCCCCChhHH
Confidence 9999999999999998875543
No 107
>KOG2978|consensus
Probab=99.37 E-value=1.4e-12 Score=117.40 Aligned_cols=102 Identities=22% Similarity=0.213 Sum_probs=78.7
Q ss_pred CCcEEEEEEeecCchHHHHHHHHHHHhcCC-ccCcceEEEEeCCCchhhHHHHHHHHHHhc-CCCeEEeecCCCcchHHH
Q psy10463 89 LPKSSIVIVFHNEAWSALLRTVHSVISRSP-RSMLKEILLVDDASTREFLKSSLDEYVAKL-SVPTRVIRSPGRVGLIKA 166 (605)
Q Consensus 89 ~p~~Siiip~yN~~~~~l~~~l~sv~~~~~-~~~~~EiivvdD~S~d~~~~~~~~~~~~~~-~~~v~~~~~~~~~G~~~a 166 (605)
.++-|||+|+|||. .+|.-++.-+..-.+ ....+|||||||+|.|+|.+ ..++..+-+ .++|.+.......|++.|
T Consensus 2 ~~kYsvilPtYnEk-~Nlpi~~~li~~~~~e~~~~~eiIivDD~SpDGt~~-~a~~L~k~yg~d~i~l~pR~~klGLgtA 79 (238)
T KOG2978|consen 2 SIKYSVILPTYNEK-ENLPIITRLIAKYMSEEGKKYEIIIVDDASPDGTQE-VAKALQKIYGEDNILLKPRTKKLGLGTA 79 (238)
T ss_pred CcceeEEeccccCC-CCCeeeHHHHHhhhhhhcCceEEEEEeCCCCCccHH-HHHHHHHHhCCCcEEEEeccCcccchHH
Confidence 35689999999999 777644444433322 12348999999999999954 344444333 456888888999999999
Q ss_pred HHHHhhhccCceEEEecCcccccccc
Q psy10463 167 RLLGARQAEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 167 ~n~g~~~a~g~~i~~lD~d~~~~~~~ 192 (605)
...|+..|+|+|++.+|+|...+|.+
T Consensus 80 y~hgl~~a~g~fiviMDaDlsHhPk~ 105 (238)
T KOG2978|consen 80 YIHGLKHATGDFIVIMDADLSHHPKF 105 (238)
T ss_pred HHhhhhhccCCeEEEEeCccCCCchh
Confidence 99999999999999999999887644
No 108
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.
Probab=99.34 E-value=2.7e-11 Score=115.43 Aligned_cols=159 Identities=19% Similarity=0.292 Sum_probs=106.9
Q ss_pred cceEEEEeechhhHHHHHHHHH---HHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHH
Q psy10463 199 KSSIVIVFHNEAWSALLRTVHS---VISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKAR 275 (605)
Q Consensus 199 ~vSVIIp~~n~~~~~l~~~l~s---l~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~ar 275 (605)
+++||||.+++. +.|...+.. .+.+..-. +.|.|+..-.. ..++.+...
T Consensus 3 ~~aiivpyr~R~-~~l~~~l~~~~~~L~rq~~~--~~i~vi~Q~~~-------------------------~~FNR~~ll 54 (219)
T cd00899 3 KVAIIVPFRNRF-EHLLIFLPHLHPFLQRQQLD--YRIFVIEQVGN-------------------------FRFNRAKLL 54 (219)
T ss_pred ceEEEEecCCHH-HHHHHHHHHHHHHHHhcCCc--EEEEEEEecCC-------------------------ccchhhhhh
Confidence 689999999999 776655544 44444322 56766643211 124556667
Q ss_pred HHHHhhc----cCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEee
Q psy10463 276 LLGARQA----EGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYT 351 (605)
Q Consensus 276 N~G~~~A----~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~ 351 (605)
|.|...| ..++++|-|-|..+..+++.. ...+.+.-...+. + .+
T Consensus 55 NvG~~~a~k~~~~dc~i~hDVDllP~~~~~~y---~~~~~p~H~s~~~-~------------------~~---------- 102 (219)
T cd00899 55 NVGFLEALKDGDWDCFIFHDVDLLPENDRNLY---GCEEGPRHLSVPL-D------------------KF---------- 102 (219)
T ss_pred hHHHHHHhhcCCccEEEEecccccccCccccc---cCCCCCeEEEEee-c------------------cc----------
Confidence 8877666 357999999999988877442 1122222111110 0 00
Q ss_pred cCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceE--EEEEcc
Q psy10463 352 YGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSH--VAHLFR 429 (605)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~--v~H~~r 429 (605)
....| .+.+.||+++++|+.|.+++|||+.|.+||+||.||+.|++..|.++...+... ..|+..
T Consensus 103 -----------~~~lp--y~~~~Gg~~~~~k~~f~~VNGf~n~f~GWGgEDdd~~~Rl~~~g~~~~r~~~~~~~~~hL~H 169 (219)
T cd00899 103 -----------HYKLP--YKTYFGGVLALTREQFRKVNGFSNAYWGWGGEDDDLYNRIKAAGLKITRPSGDTGRYKMIRH 169 (219)
T ss_pred -----------ccccC--cccccccceeeEHHHHHHhCCcCCcCccCCcchHHHHHHHHHCCCeEEeccCcccceeeeec
Confidence 01111 235688999999999999999999999999999999999999999999887654 445544
Q ss_pred c
Q psy10463 430 K 430 (605)
Q Consensus 430 ~ 430 (605)
.
T Consensus 170 ~ 170 (219)
T cd00899 170 I 170 (219)
T ss_pred C
Confidence 3
No 109
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=99.33 E-value=4.6e-12 Score=125.26 Aligned_cols=90 Identities=18% Similarity=0.191 Sum_probs=76.8
Q ss_pred EEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhhh
Q psy10463 94 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQ 173 (605)
Q Consensus 94 iiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~~ 173 (605)
+|||+||++.+.|.+||+|+++|. +|||||||+|+|.+.. ..++ ....+++++.+.|.|++.|+|.|++.
T Consensus 1 ~vI~~yn~~~~~l~~~l~sl~~q~-----~~iivvDn~s~~~~~~--~~~~---~~~~i~~i~~~~n~G~~~a~N~g~~~ 70 (237)
T cd02526 1 AVVVTYNPDLSKLKELLAALAEQV-----DKVVVVDNSSGNDIEL--RLRL---NSEKIELIHLGENLGIAKALNIGIKA 70 (237)
T ss_pred CEEEEecCCHHHHHHHHHHHhccC-----CEEEEEeCCCCccHHH--Hhhc---cCCcEEEEECCCceehHHhhhHHHHH
Confidence 589999999899999999999982 7999999999887632 1221 34569999999999999999999999
Q ss_pred ccC---ceEEEecCccccccccc
Q psy10463 174 AEG---EILVFLDAHCECTLVFN 193 (605)
Q Consensus 174 a~g---~~i~~lD~d~~~~~~~~ 193 (605)
|.| +|++++|+|+...+.|.
T Consensus 71 a~~~~~d~v~~lD~D~~~~~~~l 93 (237)
T cd02526 71 ALENGADYVLLFDQDSVPPPDMV 93 (237)
T ss_pred HHhCCCCEEEEECCCCCcCHhHH
Confidence 988 99999999998876554
No 110
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=99.32 E-value=1.2e-12 Score=128.72 Aligned_cols=99 Identities=29% Similarity=0.382 Sum_probs=71.1
Q ss_pred CcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCC-CeEEeecCCCcc---hHH
Q psy10463 90 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSV-PTRVIRSPGRVG---LIK 165 (605)
Q Consensus 90 p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~-~v~~~~~~~~~G---~~~ 165 (605)
|.||||||+||+. ..|.++|+|++.|+++. .||+||||+|++++. +.++++.+..+. +++++..+.+.| +..
T Consensus 1 P~v~Vvip~~~~~-~~l~~~l~sl~~~~~~~--~~v~vvd~~~~~~~~-~~~~~~~~~~~~~~v~vi~~~~~~g~~~k~~ 76 (228)
T PF13641_consen 1 PRVSVVIPAYNED-DVLRRCLESLLAQDYPR--LEVVVVDDGSDDETA-EILRALAARYPRVRVRVIRRPRNPGPGGKAR 76 (228)
T ss_dssp --EEEE--BSS-H-HHHHHHHHHHTTSHHHT--EEEEEEEE-SSS-GC-TTHHHHHHTTGG-GEEEEE----HHHHHHHH
T ss_pred CEEEEEEEecCCH-HHHHHHHHHHHcCCCCC--eEEEEEECCCChHHH-HHHHHHHHHcCCCceEEeecCCCCCcchHHH
Confidence 7899999999999 89999999999999866 899999999999985 346666666664 478988887665 688
Q ss_pred HHHHHhhhccCceEEEecCcccccccc
Q psy10463 166 ARLLGARQAEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 166 a~n~g~~~a~g~~i~~lD~d~~~~~~~ 192 (605)
++|.|++.+++++++++|+|+.+.+.|
T Consensus 77 a~n~~~~~~~~d~i~~lD~D~~~~p~~ 103 (228)
T PF13641_consen 77 ALNEALAAARGDYILFLDDDTVLDPDW 103 (228)
T ss_dssp HHHHHHHH---SEEEEE-SSEEE-CHH
T ss_pred HHHHHHHhcCCCEEEEECCCcEECHHH
Confidence 999999999999999999999886533
No 111
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.31 E-value=5.9e-12 Score=116.59 Aligned_cols=90 Identities=26% Similarity=0.325 Sum_probs=77.9
Q ss_pred EEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhhh
Q psy10463 94 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQ 173 (605)
Q Consensus 94 iiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~~ 173 (605)
||||+||+. +.|.++|+|+.+|+++. +|||||||||+|++...+ .+ ....++++..+.+.|++.|+|.|++.
T Consensus 1 vii~~~~~~-~~l~~~l~sl~~~~~~~--~~iiivdd~s~~~~~~~~-~~----~~~~~~~~~~~~~~g~~~a~n~~~~~ 72 (166)
T cd04186 1 IIIVNYNSL-EYLKACLDSLLAQTYPD--FEVIVVDNASTDGSVELL-RE----LFPEVRLIRNGENLGFGAGNNQGIRE 72 (166)
T ss_pred CEEEecCCH-HHHHHHHHHHHhccCCC--eEEEEEECCCCchHHHHH-HH----hCCCeEEEecCCCcChHHHhhHHHhh
Confidence 699999997 99999999999998855 799999999999974432 22 22368899999999999999999999
Q ss_pred ccCceEEEecCccccccc
Q psy10463 174 AEGEILVFLDAHCECTLV 191 (605)
Q Consensus 174 a~g~~i~~lD~d~~~~~~ 191 (605)
+.+++++|+|+|+...+.
T Consensus 73 ~~~~~i~~~D~D~~~~~~ 90 (166)
T cd04186 73 AKGDYVLLLNPDTVVEPG 90 (166)
T ss_pred CCCCEEEEECCCcEECcc
Confidence 999999999999977643
No 112
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.30 E-value=1e-11 Score=134.72 Aligned_cols=102 Identities=32% Similarity=0.316 Sum_probs=89.7
Q ss_pred CCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeec-CCCcchHHHH
Q psy10463 89 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRS-PGRVGLIKAR 167 (605)
Q Consensus 89 ~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~-~~~~G~~~a~ 167 (605)
+|.+||+||+|||+.+.+.+++.|+.+|.|+. .|||||||+|+|++ .+++++...+..+.++++.. .++.|++.|.
T Consensus 53 ~p~vsviiP~ynE~~~~~~~~l~s~~~~dyp~--~evivv~d~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~gK~~al 129 (439)
T COG1215 53 LPKVSVIIPAYNEEPEVLEETLESLLSQDYPR--YEVIVVDDGSTDET-YEILEELGAEYGPNFRVIYPEKKNGGKAGAL 129 (439)
T ss_pred CCceEEEEecCCCchhhHHHHHHHHHhCCCCC--ceEEEECCCCChhH-HHHHHHHHhhcCcceEEEeccccCccchHHH
Confidence 59999999999999669999999999999999 79999999999998 45567777776556777755 6889999999
Q ss_pred HHHhhhccCceEEEecCccccccccc
Q psy10463 168 LLGARQAEGEILVFLDAHCECTLVFN 193 (605)
Q Consensus 168 n~g~~~a~g~~i~~lD~d~~~~~~~~ 193 (605)
|.|+..++||+++++|+|..+.++++
T Consensus 130 ~~~l~~~~~d~V~~~DaD~~~~~d~l 155 (439)
T COG1215 130 NNGLKRAKGDVVVILDADTVPEPDAL 155 (439)
T ss_pred HHHHhhcCCCEEEEEcCCCCCChhHH
Confidence 99999999999999999998876554
No 113
>KOG2977|consensus
Probab=99.23 E-value=2.3e-11 Score=116.86 Aligned_cols=95 Identities=27% Similarity=0.283 Sum_probs=76.2
Q ss_pred cEEEEEEeecCchHHHHHH----HHHHHhc--CCccCcceEEEEeCCCchhhHHHHHHHHHHhc-CCCeEEeecCCCcch
Q psy10463 91 KSSIVIVFHNEAWSALLRT----VHSVISR--SPRSMLKEILLVDDASTREFLKSSLDEYVAKL-SVPTRVIRSPGRVGL 163 (605)
Q Consensus 91 ~~Siiip~yN~~~~~l~~~----l~sv~~~--~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~-~~~v~~~~~~~~~G~ 163 (605)
.+|||||+|||+ ..|..+ ++++-.+ ..++.-+|||||||||+|.|++. .-++..+. .+.++|+...+|.|.
T Consensus 68 ~lsVIVpaynE~-~ri~~mldeav~~le~ry~~~~~F~~eiiVvddgs~d~T~~~-a~k~s~K~~~d~irV~~l~~nrgK 145 (323)
T KOG2977|consen 68 YLSVIVPAYNEE-GRIGAMLDEAVDYLEKRYLSDKSFTYEIIVVDDGSTDSTVEV-ALKFSRKLGDDNIRVIKLKKNRGK 145 (323)
T ss_pred eeEEEEecCCcc-cchHHHHHHHHHHHHHHhccCCCCceeEEEeCCCCchhHHHH-HHHHHHHcCcceEEEeehhccCCC
Confidence 589999999998 655554 4444333 33446689999999999999664 44555444 467999999999999
Q ss_pred HHHHHHHhhhccCceEEEecCccc
Q psy10463 164 IKARLLGARQAEGEILVFLDAHCE 187 (605)
Q Consensus 164 ~~a~n~g~~~a~g~~i~~lD~d~~ 187 (605)
++|...|+-.++|++++|.|+|-.
T Consensus 146 GgAvR~g~l~~rG~~ilfadAdGa 169 (323)
T KOG2977|consen 146 GGAVRKGMLSSRGQKILFADADGA 169 (323)
T ss_pred CcceehhhHhccCceEEEEcCCCC
Confidence 999999999999999999999973
No 114
>KOG2977|consensus
Probab=99.22 E-value=3.2e-11 Score=115.92 Aligned_cols=113 Identities=27% Similarity=0.227 Sum_probs=86.1
Q ss_pred cCCcceEEEEeechhh---HHHHHHHHHHHhcC--CCCCceeEEEeeCCCChHHHHHHHHHHHHHCC-CCEEEEeCCCCC
Q psy10463 196 FLPKSSIVIVFHNEAW---SALLRTVHSVISRS--PRSMLKEILLVDDASTREFLKSSLDEYVAKLS-VPTRVIRSPGRV 269 (605)
Q Consensus 196 ~~p~vSVIIp~~n~~~---~~l~~~l~sl~~q~--~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~-~~v~~i~~~~n~ 269 (605)
..+-+|||||.||++. ..+.+|+.++..+. .+...+|||||||||+|.+++ +.-++..++. .+++++...+|.
T Consensus 65 ~~~~lsVIVpaynE~~ri~~mldeav~~le~ry~~~~~F~~eiiVvddgs~d~T~~-~a~k~s~K~~~d~irV~~l~~nr 143 (323)
T KOG2977|consen 65 EKMYLSVIVPAYNEEGRIGAMLDEAVDYLEKRYLSDKSFTYEIIVVDDGSTDSTVE-VALKFSRKLGDDNIRVIKLKKNR 143 (323)
T ss_pred hhceeEEEEecCCcccchHHHHHHHHHHHHHHhccCCCCceeEEEeCCCCchhHHH-HHHHHHHHcCcceEEEeehhccC
Confidence 3457999999999982 34667777776654 334568999999999998665 4555664444 589999999999
Q ss_pred ChHHHHHHHHhhccCCEEEEecCCccc---CcChHHHHHHHHH
Q psy10463 270 GLIKARLLGARQAEGEILVFLDAHCEC---TLGWLENLVARVA 309 (605)
Q Consensus 270 G~~~arN~G~~~A~gd~i~flD~D~~~---~~~~L~~ll~~~~ 309 (605)
|.++|.-.|+.+++|++++|.|+|-.- +-..|+..+....
T Consensus 144 gKGgAvR~g~l~~rG~~ilfadAdGaTkf~d~ekLe~al~~~~ 186 (323)
T KOG2977|consen 144 GKGGAVRKGMLSSRGQKILFADADGATKFADLEKLEKALNDKA 186 (323)
T ss_pred CCCcceehhhHhccCceEEEEcCCCCccCCCHHHHHHHHHhhc
Confidence 999999999999999999999999763 2234444444443
No 115
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=99.21 E-value=1.7e-10 Score=117.85 Aligned_cols=185 Identities=14% Similarity=0.170 Sum_probs=124.2
Q ss_pred ceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCC----C-------
Q psy10463 200 SSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG----R------- 268 (605)
Q Consensus 200 vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~----n------- 268 (605)
+.|||.+||++ +.+.++|+||+++.|.....+|||.+||+.++ +.+.+..+. ..++++.+.. +
T Consensus 2 ~PVlv~ayNRp-~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~-~~~~v~~~~----~~i~~i~~~~~~~~~~~~~~~~ 75 (334)
T cd02514 2 IPVLVIACNRP-DYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEE-VADVAKSFG----DGVTHIQHPPISIKNVNPPHKF 75 (334)
T ss_pred cCEEEEecCCH-HHHHHHHHHHHhccccCCCceEEEEeCCCchH-HHHHHHhhc----cccEEEEcccccccccCccccc
Confidence 57999999999 99999999999985444448999999999876 333444442 2566666532 2
Q ss_pred ---CChHH----HHHHHHhhccCCEEEEecCCcccCcCh---HHHHHHHHHcCCc-EEEeeeEeeecCCeeEEecccccc
Q psy10463 269 ---VGLIK----ARLLGARQAEGEILVFLDAHCECTLGW---LENLVARVAEDRT-RVVCPVIDIISDVTFAYVRSFELH 337 (605)
Q Consensus 269 ---~G~~~----arN~G~~~A~gd~i~flD~D~~~~~~~---L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~ 337 (605)
.++++ |+|.++..+.++++++|++|+++.|++ ++.++..++.++. ..+++-- .+
T Consensus 76 ~~y~~ia~hyk~aln~vF~~~~~~~vIILEDDl~~sPdFf~yf~~~l~~y~~D~~v~~ISa~N----dn----------- 140 (334)
T cd02514 76 QGYYRIARHYKWALTQTFNLFGYSFVIILEDDLDIAPDFFSYFQATLPLLEEDPSLWCISAWN----DN----------- 140 (334)
T ss_pred chhhHHHHHHHHHHHHHHHhcCCCEEEEECCCCccCHhHHHHHHHHHHHHhcCCCEEEEEeec----cC-----------
Confidence 22344 889999888999999999999999995 5777777777765 3333211 00
Q ss_pred eeeeeccceeeEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHH--HHcCCe
Q psy10463 338 WGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRV--WQCGGS 415 (605)
Q Consensus 338 ~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl--~~~G~~ 415 (605)
|.. ... ...+...+++..+.|...|+.|+.|+++ ++... .-|+|+++|. .++| |
T Consensus 141 -G~~---------~~~-------~~~~~~lyrs~ff~glGWml~r~~W~e~---~~~wp---~~~WD~w~R~~~~rkg-r 196 (334)
T cd02514 141 -GKE---------HFV-------DDTPSLLYRTDFFPGLGWMLTRKLWKEL---EPKWP---KAFWDDWMRLPEQRKG-R 196 (334)
T ss_pred -Ccc---------ccc-------CCCcceEEEecCCCchHHHHHHHHHHHh---CCCCC---CCChHHhhcchhhhcC-C
Confidence 000 000 0002233456667777778999999998 66554 4599999996 3445 4
Q ss_pred EEEecc-eEEEEEcc
Q psy10463 416 IEIAPC-SHVAHLFR 429 (605)
Q Consensus 416 i~~~p~-s~v~H~~r 429 (605)
-.+.|+ ++++|..+
T Consensus 197 ~cirPeisRt~~~g~ 211 (334)
T cd02514 197 ECIRPEISRTYHFGK 211 (334)
T ss_pred ccccCCcchheeccc
Confidence 444444 56666653
No 116
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=99.13 E-value=5.6e-11 Score=118.34 Aligned_cols=75 Identities=15% Similarity=0.109 Sum_probs=62.4
Q ss_pred EEEEeecCchHHHHHHHHHHHhcCCc--------cCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchH-
Q psy10463 94 IVIVFHNEAWSALLRTVHSVISRSPR--------SMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLI- 164 (605)
Q Consensus 94 iiip~yN~~~~~l~~~l~sv~~~~~~--------~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~- 164 (605)
||||+|||+...|.++|+||++|+|+ ...+|||||||||+|. |.|+.
T Consensus 1 v~ip~yNE~~~~i~~~l~sv~~q~y~~~~~~~~~~~~~evivv~Dgs~d~------------------------~~gk~~ 56 (244)
T cd04190 1 VCVTMYNEDEEELARTLDSILKNDYPFCARGGDSWKKIVVCVIFDGAIKK------------------------NRGKRD 56 (244)
T ss_pred CEEeeecCCHHHHHHHHHHHHHhhHHHHhcCCCCccEEEEEEEeCCcccc------------------------cCcchH
Confidence 79999999757999999999999998 3347999999999991 23332
Q ss_pred ------HHHHHHhhhccCceEEEecCcccccccc
Q psy10463 165 ------KARLLGARQAEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 165 ------~a~n~g~~~a~g~~i~~lD~d~~~~~~~ 192 (605)
.+.|.|+..|+|++++++|+|+.+.+.|
T Consensus 57 ~~~~~~~~~~~~~~~a~~e~i~~~DaD~~~~~~~ 90 (244)
T cd04190 57 SQLWFFNYFCRVLFPDDPEFILLVDADTKFDPDS 90 (244)
T ss_pred HHHHHHHHHHHHhhcCCCCEEEEECCCCcCCHhH
Confidence 3568888899999999999999887543
No 117
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=99.09 E-value=9.1e-10 Score=113.41 Aligned_cols=93 Identities=23% Similarity=0.304 Sum_probs=81.7
Q ss_pred CCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhc-CCCeEEeecCCCcchHHHH
Q psy10463 89 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKL-SVPTRVIRSPGRVGLIKAR 167 (605)
Q Consensus 89 ~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~-~~~v~~~~~~~~~G~~~a~ 167 (605)
+|.+|+||++||.. +.+.+||.|+.+|+++. .++++|||+|+|++.+. ++.. .+.++++.+.+|.|++++-
T Consensus 2 ~~~i~~iiv~yn~~-~~l~~~l~~l~~~~~~~--~~iv~vDn~s~d~~~~~-----~~~~~~~~v~~i~~~~NlG~agg~ 73 (305)
T COG1216 2 MPKISIIIVTYNRG-EDLVECLASLAAQTYPD--DVIVVVDNGSTDGSLEA-----LKARFFPNVRLIENGENLGFAGGF 73 (305)
T ss_pred CcceEEEEEecCCH-HHHHHHHHHHhcCCCCC--cEEEEccCCCCCCCHHH-----HHhhcCCcEEEEEcCCCccchhhh
Confidence 68999999999999 99999999999999988 57778999999998543 2222 5679999999999999999
Q ss_pred HHHhhhccCc---eEEEecCccccc
Q psy10463 168 LLGARQAEGE---ILVFLDAHCECT 189 (605)
Q Consensus 168 n~g~~~a~g~---~i~~lD~d~~~~ 189 (605)
|.|++.|.++ |+++|+.|..+.
T Consensus 74 n~g~~~a~~~~~~~~l~LN~D~~~~ 98 (305)
T COG1216 74 NRGIKYALAKGDDYVLLLNPDTVVE 98 (305)
T ss_pred hHHHHHHhcCCCcEEEEEcCCeeeC
Confidence 9999999766 899999997654
No 118
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=99.07 E-value=5.8e-10 Score=104.76 Aligned_cols=143 Identities=18% Similarity=0.271 Sum_probs=97.3
Q ss_pred EEEeCCCCCCh---HHHHHHHHhh-ccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEeccccc
Q psy10463 261 RVIRSPGRVGL---IKARLLGARQ-AEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFEL 336 (605)
Q Consensus 261 ~~i~~~~n~G~---~~arN~G~~~-A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~ 336 (605)
+++..+...|. ..+...|+++ |++|+|+|+|+|+.++|+||..|+..+.+...++|+......+.+.+
T Consensus 5 ~lvv~~~~~g~N~Kv~nL~~~~~~~a~~d~~~~~DsDi~v~p~~L~~lv~~l~~p~vglVt~~~~~~~~~~~-------- 76 (175)
T PF13506_consen 5 RLVVGGPPRGCNPKVNNLAQGLEAGAKYDYLVISDSDIRVPPDYLRELVAPLADPGVGLVTGLPRGVPARGF-------- 76 (175)
T ss_pred EEEECCCCCCCChHHHHHHHHHHhhCCCCEEEEECCCeeECHHHHHHHHHHHhCCCCcEEEecccccCCcCH--------
Confidence 35555555553 4445567787 99999999999999999999999999998777777754322222211
Q ss_pred ceeeeeccceeeEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeE
Q psy10463 337 HWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSI 416 (605)
Q Consensus 337 ~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i 416 (605)
++... ... .......... .-..+...|++|++||+.++++|||+.--. +-.||+.|..++++.|+++
T Consensus 77 -~~~l~-~~~---~~~~~~~~~a-------~~~~~~~~G~~m~~rr~~L~~~GG~~~l~~-~ladD~~l~~~~~~~G~~v 143 (175)
T PF13506_consen 77 -WSRLE-AAF---FNFLPGVLQA-------LGGAPFAWGGSMAFRREALEEIGGFEALAD-YLADDYALGRRLRARGYRV 143 (175)
T ss_pred -HHHHH-HHH---HhHHHHHHHH-------hcCCCceecceeeeEHHHHHHcccHHHHhh-hhhHHHHHHHHHHHCCCeE
Confidence 00000 000 0000000000 113457889999999999999999987333 3489999999999999999
Q ss_pred EEecceEE
Q psy10463 417 EIAPCSHV 424 (605)
Q Consensus 417 ~~~p~s~v 424 (605)
...|.+.+
T Consensus 144 ~~~~~~v~ 151 (175)
T PF13506_consen 144 VLSPYPVV 151 (175)
T ss_pred EEcchhee
Confidence 99997654
No 119
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=99.07 E-value=2.3e-10 Score=116.47 Aligned_cols=84 Identities=18% Similarity=0.164 Sum_probs=70.7
Q ss_pred EeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchh-hHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhhhc-
Q psy10463 97 VFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTRE-FLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQA- 174 (605)
Q Consensus 97 p~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~-~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~~a- 174 (605)
.+||++.+.|.+||+|+++|+ +|||||||||++. +++ +..+. .+.++++++++|.|++.|+|.|++.|
T Consensus 1 Vtyn~~~~~l~~~l~sl~~q~-----~~iiVVDN~S~~~~~~~----~~~~~-~~~i~~i~~~~N~G~a~a~N~Gi~~a~ 70 (281)
T TIGR01556 1 VTFNPDLEHLGELITSLPKQV-----DRIIAVDNSPHSDQPLK----NARLR-GQKIALIHLGDNQGIAGAQNQGLDASF 70 (281)
T ss_pred CccCccHHHHHHHHHHHHhcC-----CEEEEEECcCCCcHhHH----HHhcc-CCCeEEEECCCCcchHHHHHHHHHHHH
Confidence 379986699999999999996 6999999999764 433 32222 35699999999999999999999998
Q ss_pred --cCceEEEecCcccccc
Q psy10463 175 --EGEILVFLDAHCECTL 190 (605)
Q Consensus 175 --~g~~i~~lD~d~~~~~ 190 (605)
.++|++++|+|+.+.+
T Consensus 71 ~~~~d~i~~lD~D~~~~~ 88 (281)
T TIGR01556 71 RRGVQGVLLLDQDSRPGN 88 (281)
T ss_pred HCCCCEEEEECCCCCCCH
Confidence 7899999999998764
No 120
>KOG3588|consensus
Probab=99.05 E-value=6.7e-09 Score=102.99 Aligned_cols=212 Identities=18% Similarity=0.282 Sum_probs=142.2
Q ss_pred cCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCC-CChHHHH-HHHHHHHHHCCCCEEEEeCCCCCChHH
Q psy10463 196 FLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDA-STREFLK-SSLDEYVAKLSVPTRVIRSPGRVGLIK 273 (605)
Q Consensus 196 ~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~-S~d~~~~-~~l~~~~~~~~~~v~~i~~~~n~G~~~ 273 (605)
..|.+.+|+|-..+. ..+.+...++....... .+++||-=| |.++..+ +.+..+..+++ ++.++.....+.-+.
T Consensus 227 ~~pgih~i~pl~gr~-~~f~rf~q~~c~~~d~~--l~l~vv~f~~se~e~ak~e~~tslra~f~-~~q~l~lngeFSRa~ 302 (494)
T KOG3588|consen 227 EDPGIHMIMPLRGRA-AIFARFAQSICARGDDR--LALSVVYFGYSEDEMAKRETITSLRASFI-PVQFLGLNGEFSRAK 302 (494)
T ss_pred cCCCceEEEeccchH-HHhhhhhHHHhccCCCc--eEEEEEEecCCChHHHhhhHHHHHhhcCC-ceEEecccchhhhhH
Confidence 467899999999999 88888888888776655 466655444 4444333 34456667777 777766655566777
Q ss_pred HHHHHHhhccCCE-EEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeec
Q psy10463 274 ARLLGARQAEGEI-LVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTY 352 (605)
Q Consensus 274 arN~G~~~A~gd~-i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~ 352 (605)
|...|++.-..+. ++|.|-|..++.++|++.-.... ...-+..|++...-.....|..... .
T Consensus 303 aL~vGAe~~~~nvLLFfcDVDi~FT~efL~rcr~Nt~-~gkqiyfPivFS~ynp~ivy~~~~~----------------~ 365 (494)
T KOG3588|consen 303 ALMVGAETLNANVLLFFCDVDIYFTTEFLNRCRLNTI-LGKQIYFPIVFSQYNPEIVYEQDKP----------------L 365 (494)
T ss_pred HHHhhHHHhccceeEEEeccceeehHHHHHHHhhccC-CCceEEEEEEEeecCcceeecCCCC----------------C
Confidence 8889999987665 46679999999988877643322 2345666776332211122211100 1
Q ss_pred CchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEcccC
Q psy10463 353 GSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFRKA 431 (605)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r~~ 431 (605)
+ .+........+..++ .+.-|..++-|..|..+||||..+.+||+||++|..+..+.|.++.-.|..-+.|+++..
T Consensus 366 p-~e~~~~~~~~tGfwR--dfGfGmtc~yrsd~~~vgGFD~~I~GWG~EDV~Ly~K~v~~~l~viR~p~pGl~H~~H~~ 441 (494)
T KOG3588|consen 366 P-AEQQLVIKKDTGFWR--DFGFGMTCQYRSDFLTVGGFDMEIKGWGGEDVDLYRKYVHSGLKVIRTPEPGLFHLWHPK 441 (494)
T ss_pred c-hhHheeecccccccc--ccCCceeEEeeccceeecCcceeeeccCcchHHHHHHHHhcCcEEEecCCCceEEeeccc
Confidence 1 111110111122222 233345567899999999999999999999999999999999999999999999998654
No 121
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=99.04 E-value=2.9e-09 Score=108.27 Aligned_cols=94 Identities=35% Similarity=0.437 Sum_probs=70.7
Q ss_pred EEEEEeecCch-----HHHHHHHHHHHhc-CCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCC---cch
Q psy10463 93 SIVIVFHNEAW-----SALLRTVHSVISR-SPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGR---VGL 163 (605)
Q Consensus 93 Siiip~yN~~~-----~~l~~~l~sv~~~-~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~---~G~ 163 (605)
|||||++|... +.|..||.++..+ ..++ .|||||||||++.+. +.+.+..+... .++++..... .|.
T Consensus 1 SiIIPv~~~~~~~~i~~~l~~~l~~l~~~~~~~~--~eiIvvd~~s~~~~~-~~l~~~~~~~~-~~~~i~~~~~~~~f~~ 76 (281)
T PF10111_consen 1 SIIIPVRNRSERPDILERLRNCLESLSQFQSDPD--FEIIVVDDGSSDEFD-EELKKLCEKNG-FIRYIRHEDNGEPFSR 76 (281)
T ss_pred CEEEEecCCccchHHHHHHHHHHHHHHhcCCCCC--EEEEEEECCCchhHH-HHHHHHHhccC-ceEEEEcCCCCCCcCH
Confidence 79999999983 3566667777763 3333 799999999999863 33555555443 2336666544 499
Q ss_pred HHHHHHHhhhccCceEEEecCcccccc
Q psy10463 164 IKARLLGARQAEGEILVFLDAHCECTL 190 (605)
Q Consensus 164 ~~a~n~g~~~a~g~~i~~lD~d~~~~~ 190 (605)
+.|||.|+..|++++++|+|+|+.+.+
T Consensus 77 a~arN~g~~~A~~d~l~flD~D~i~~~ 103 (281)
T PF10111_consen 77 AKARNIGAKYARGDYLIFLDADCIPSP 103 (281)
T ss_pred HHHHHHHHHHcCCCEEEEEcCCeeeCH
Confidence 999999999999999999999997753
No 122
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=99.04 E-value=1.2e-09 Score=118.34 Aligned_cols=102 Identities=14% Similarity=0.089 Sum_probs=79.9
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHH-hcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCC--Ccch
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVI-SRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG--RVGL 163 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~-~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~--~~G~ 163 (605)
...|.+||+||+|||+ +.|.++|+|++ ++.|++ +||+|+||+|+|+|.+ .+++..++++ .++++..+. ..|+
T Consensus 63 ~~~p~vaIlIPA~NE~-~vI~~~l~s~L~~ldY~~--~eIiVv~d~ndd~T~~-~v~~l~~~~p-~v~~vv~~~~gp~~K 137 (504)
T PRK14716 63 VPEKRIAIFVPAWREA-DVIGRMLEHNLATLDYEN--YRIFVGTYPNDPATLR-EVDRLAARYP-RVHLVIVPHDGPTSK 137 (504)
T ss_pred CCCCceEEEEeccCch-hHHHHHHHHHHHcCCCCC--eEEEEEECCCChhHHH-HHHHHHHHCC-CeEEEEeCCCCCCCH
Confidence 4478999999999999 99999999976 456876 7999999999999854 4666666664 365444333 3468
Q ss_pred HHHHHHHhhhc------cC---ceEEEecCccccccccc
Q psy10463 164 IKARLLGARQA------EG---EILVFLDAHCECTLVFN 193 (605)
Q Consensus 164 ~~a~n~g~~~a------~g---~~i~~lD~d~~~~~~~~ 193 (605)
+.|.|.|++.+ +| ++++++|+|+.+.++++
T Consensus 138 a~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~~v~Pd~L 176 (504)
T PRK14716 138 ADCLNWIYQAIFAFERERGIRFAIIVLHDAEDVIHPLEL 176 (504)
T ss_pred HHHHHHHHHHHHHhhhhcCCCcCEEEEEcCCCCcCccHH
Confidence 99999998654 56 99999999998876543
No 123
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]
Probab=98.99 E-value=5.2e-09 Score=99.51 Aligned_cols=212 Identities=16% Similarity=0.204 Sum_probs=124.3
Q ss_pred CCcceEEEEeechh-hH-HHHHHHH--HHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCCh-
Q psy10463 197 LPKSSIVIVFHNEA-WS-ALLRTVH--SVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGL- 271 (605)
Q Consensus 197 ~p~vSVIIp~~n~~-~~-~l~~~l~--sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~- 271 (605)
+|+.++|||+-... .+ .-.|.+. ++++--.+....+||+++..+..+ ..+..+....+ ++-++.-.....+
T Consensus 1 m~~~~~iiPv~~S~e~p~~~~R~f~~~~~~k~fts~~~~~vi~~~~~~~~d---~~i~~~i~~~~-~~~yl~~~s~~~F~ 76 (346)
T COG4092 1 MQPNGEIIPVAESEELPLTDSRQFSRTSAVKVFTSSDITMVICLRAHEVMD---RLIRSYIDPMP-RVLYLDFGSPEPFA 76 (346)
T ss_pred CCCcceEeecchhhccchhHHHHHhhHhhhhhccccccEEEEEEecchhHH---HHHHHHhcccc-ceEEEecCCCcccc
Confidence 46789999986644 11 2233343 323322233448999998876433 45777888777 7777765554443
Q ss_pred --HHHHHHHHhhcc----CCEEEEecCCcccCcChHHHHHHHH-----HcCC-cEEEeeeEeeecCCeeEEeccccccee
Q psy10463 272 --IKARLLGARQAE----GEILVFLDAHCECTLGWLENLVARV-----AEDR-TRVVCPVIDIISDVTFAYVRSFELHWG 339 (605)
Q Consensus 272 --~~arN~G~~~A~----gd~i~flD~D~~~~~~~L~~ll~~~-----~~~~-~~vv~p~i~~i~~~~~~~~~~~~~~~g 339 (605)
+..+|.|+..|. .++|+|||.||....+-.++++..+ ..+= ...|-|+.-.-...+... ..
T Consensus 77 s~~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~S~dnF~k~l~~~~ikk~~tnI~a~~vlPV~~LNk~~~~v~-------f~ 149 (346)
T COG4092 77 SETICANNGADYSHEKCESNLVLFLDVDCFGSSDNFAKMLSIATIKKMRTNIDAPLVLPVYHLNKADTQVF-------FD 149 (346)
T ss_pred chhhhhhccchhhhccccccEEEEEeccccccHHHHHHHHHHHHHHHHHhccCcceeeeeeecchhhhhHH-------HH
Confidence 567899998886 8999999999999877777776543 2221 345556542111111000 00
Q ss_pred eeeccceeeEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEe
Q psy10463 340 AFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIA 419 (605)
Q Consensus 340 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~ 419 (605)
.++. .|...-.+.......... .+-. ....+.++|.|..|...|||||.|.++|.||.||..|+-.. +...
T Consensus 150 ~~d~----f~d~~i~es~~~~~~~~~-~ff~-~~~T~~~liN~~~F~~tgGydE~F~GhG~EDfe~~~R~~l~---~~~~ 220 (346)
T COG4092 150 VEDM----FLDAMIFESPLAEFRKED-NFFI-APYTNIFLINRRMFSLTGGYDERFRGHGSEDFEFLTRLGLY---IKNL 220 (346)
T ss_pred HHHH----hhhhHhhhhHHHHhCccc-cccc-ccccceEEEehhHHHHhcCCccccccCCchhHHHHHHHHHH---Hhcc
Confidence 0110 000000000000011111 1111 23456889999999999999999999999999999998654 4444
Q ss_pred cceEEEEEc
Q psy10463 420 PCSHVAHLF 428 (605)
Q Consensus 420 p~s~v~H~~ 428 (605)
|.-.-.|.+
T Consensus 221 p~~~~nh~y 229 (346)
T COG4092 221 PMLTKNHLY 229 (346)
T ss_pred ccccccccc
Confidence 544444554
No 124
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=98.99 E-value=2.2e-09 Score=102.69 Aligned_cols=125 Identities=21% Similarity=0.283 Sum_probs=80.9
Q ss_pred EEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhhhccCCC
Q psy10463 286 ILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFT 365 (605)
Q Consensus 286 ~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~ 365 (605)
||+++|+|+.+++++|+.+++.+.++...++.+.+...+.+++ -.....+.+... .... .. ...
T Consensus 1 ~v~~~DaDt~~~~d~l~~~~~~~~~~~~~~vq~~~~~~~~~~~------~~~~~~~~~~~~-----~~~~--~~---~~~ 64 (193)
T PF13632_consen 1 YVLFLDADTRLPPDFLERLVAALEDPKVDAVQGPIIFRNRGSL------LTRLQDFEYAIS-----HGLS--RL---SQS 64 (193)
T ss_pred CEEEEcCCCCCChHHHHHHHHHHhCCCceEEEccEEecCCCCh------hheeehhhhhhh-----hhhh--HH---HHH
Confidence 6899999999999999999999994445655554422211111 000111111000 0000 00 000
Q ss_pred CccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEEEEc
Q psy10463 366 EPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLF 428 (605)
Q Consensus 366 ~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~ 428 (605)
..-....+.|+++++|+++++++|||| .... -+||.|+++|++++|+++.++|.+.+++..
T Consensus 65 ~~~~~~~~~G~~~~~r~~~l~~vg~~~-~~~~-~~ED~~l~~~l~~~G~~~~~~~~~~~~~~~ 125 (193)
T PF13632_consen 65 SLGRPLFLSGSGMLFRREALREVGGFD-DPFS-IGEDMDLGFRLRRAGYRIVYVPDAIVYTEA 125 (193)
T ss_pred hcCCCccccCcceeeeHHHHHHhCccc-cccc-ccchHHHHHHHHHCCCEEEEecccceeeeC
Confidence 111233577999999999999999999 3333 379999999999999999999999776553
No 125
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases. The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=98.99 E-value=3.8e-10 Score=90.30 Aligned_cols=59 Identities=37% Similarity=0.683 Sum_probs=45.3
Q ss_pred cccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEE-EEEc
Q psy10463 370 TPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHV-AHLF 428 (605)
Q Consensus 370 ~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v-~H~~ 428 (605)
.+.+.||.++++|+.|.++|||||.|..||+||.||+.|++.+|.++...|.+.+ +|..
T Consensus 16 ~~~~~Gg~~~~~~~~f~~vnGfde~f~gWG~ED~Dl~~Rl~~~g~~~~~~~~~~~~yh~~ 75 (78)
T PF02709_consen 16 YPNFFGGVFAISREDFEKVNGFDERFWGWGGEDDDLYNRLWKAGLKIVRVPGSIGRYHLW 75 (78)
T ss_dssp STT---SEEEEEHHHHHHTTSS-SS-TSCSSHHHHHHHHHHHTT---B-SSTTTTEEEEE
T ss_pred CCCeeEEEEEEeHHHHHHcCCCCccccccCccHHHHHHHHHHcCCeEEecCCceEEEEEe
Confidence 4678899999999999999999999999999999999999999999988877665 5765
No 126
>PF00652 Ricin_B_lectin: Ricin-type beta-trefoil lectin domain; InterPro: IPR000772 Ricin is a legume lectin from the seeds of the castor bean plant, Ricinus communis. The seeds are poisonous to people, animals and insects and just one milligram of ricin can kill an adult. Primary structure analysis has shown the presence of a similar domain in many carbohydrate-recognition proteins like plant and bacterial AB-toxins, glycosidases or proteases [, , ]. This domain, known as the ricin B lectin domain, can be present in one or more copies and has been shown in some instance to bind simple sugars, such as galactose or lactose. The ricin B lectin domain is composed of three homologous subdomains of 40 amino acids (alpha, beta and gamma) and a linker peptide of around 15 residues (lambda). It has been proposed that the ricin B lectin domain arose by gene triplication from a primitive 40 residue galactoside-binding peptide [, ]. The most characteristic, though not completely conserved, sequence feature is the presence of a Q-W pattern. Consequently, the ricin B lectin domain as also been refered as the (QxW)3 domain and the three homologous regions as the QxW repeats [, ]. A disulphide bond is also conserved in some of the QxW repeats []. The 3D structure of the ricin B chain has shown that the three QxW repeats pack around a pseudo threefold axis that is stabilised by the lambda linker []. The ricin B lectin domain has no major segments of a helix or beta sheet but each of the QxW repeats contains an omega loop []. An idealized omega-loop is a compact, contiguous segment of polypeptide that traces a 'loop-shaped' path in three-dimensional space; the main chain resembles a Greek omega.; PDB: 2VLC_B 3A22_B 3A21_B 3A23_B 1GGP_B 1VCL_A 2Z48_B 2Z49_A 2D7R_A 2D7I_A ....
Probab=98.97 E-value=9e-10 Score=97.09 Aligned_cols=83 Identities=25% Similarity=0.565 Sum_probs=66.5
Q ss_pred ccccccccc-ccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeecCC--CeeeecCCCCCCCCCceEE
Q psy10463 513 FFGRIRHVQ-THKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIATDE--SVCLDVPEYENDISPRVRI 589 (605)
Q Consensus 513 ~~G~ir~~~-~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~~~--~~CLd~~~~~~~~g~~v~l 589 (605)
|+|.|++.. +++|||+. ... ..|++|++++| ++ ..+|.|.++ ..+.|+... ..||++.+.. .|+.+.+
T Consensus 1 ~~g~i~~~~~~~~cl~~~-~~~---~~~~~v~l~~c-~~-~~~Q~w~~~-~~~~i~~~~~~~~CL~~~~~~--~~~~i~l 71 (124)
T PF00652_consen 1 ASGYIRNVNKSGLCLDVQ-GST---KNGSPVVLYPC-DG-SDNQLWRFD-PDGQIRSNNNPNLCLDVDGSS--PGTKIVL 71 (124)
T ss_dssp EEEEEEEEEGGGEEEEEG-GSS---STTTBEEEEE---S-SGGGEEEEE-TTSBEEETTETTEEEEESSSS--TTEBEEE
T ss_pred CceEEEEeeCCCCeEEEc-CCC---CCCCEEEEEEC-CC-CCceeEEEc-CCCceeeccCcceEEEeeccC--CCceEEE
Confidence 578999977 99999998 333 56899999999 65 778999999 778888643 3599998765 5789999
Q ss_pred EeCCCCC-CcceEeCC
Q psy10463 590 LACSGFN-RQRWTYDK 604 (605)
Q Consensus 590 ~~C~~~~-~Q~W~~~~ 604 (605)
++|+... +|+|.+..
T Consensus 72 ~~C~~~~~~Q~W~~~~ 87 (124)
T PF00652_consen 72 WPCDSNSSNQRWKFDP 87 (124)
T ss_dssp EETTTTGGGGBEEEET
T ss_pred eeccCCccCCeEEEcC
Confidence 9999876 79999864
No 127
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=98.94 E-value=6.7e-09 Score=103.61 Aligned_cols=99 Identities=13% Similarity=0.097 Sum_probs=73.5
Q ss_pred EEEEEEeecCchHHHHHHHHHHHh----cCC-ccCcceEEEEeCCCchhhHH---HHHHHHHHhc--CCCeEEeecCCCc
Q psy10463 92 SSIVIVFHNEAWSALLRTVHSVIS----RSP-RSMLKEILLVDDASTREFLK---SSLDEYVAKL--SVPTRVIRSPGRV 161 (605)
Q Consensus 92 ~Siiip~yN~~~~~l~~~l~sv~~----~~~-~~~~~EiivvdD~S~d~~~~---~~~~~~~~~~--~~~v~~~~~~~~~ 161 (605)
+||+||+|||....|.++|.|+.. |.| +. +||+|+||+++++... ..+.+..++. ..++++++..++.
T Consensus 1 ~SIliP~~ne~~~~l~~~l~~~~~~~~~~~~~~~--~eI~vldD~~d~~~~~~~~~~~~~l~~~~~~~~~v~~~~r~~~~ 78 (254)
T cd04191 1 TAIVMPVYNEDPARVFAGLRAMYESLAKTGLADH--FDFFILSDTRDPDIWLAEEAAWLDLCEELGAQGRIYYRRRRENT 78 (254)
T ss_pred CEEEEeCCCCCHHHHHHHHHHHHHHHHhcCCcCc--eEEEEECCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEcCCCC
Confidence 699999999997779999998875 565 44 8999999999875421 1223344444 3458888888887
Q ss_pred ch-HHHHHHHhhh--ccCceEEEecCcccccccc
Q psy10463 162 GL-IKARLLGARQ--AEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 162 G~-~~a~n~g~~~--a~g~~i~~lD~d~~~~~~~ 192 (605)
|. +++.|.++.. +++++++++|+|..+.+++
T Consensus 79 g~Kag~l~~~~~~~~~~~~~i~~~DaD~~~~p~~ 112 (254)
T cd04191 79 GRKAGNIADFCRRWGSRYDYMVVLDADSLMSGDT 112 (254)
T ss_pred CccHHHHHHHHHHhCCCCCEEEEEeCCCCCCHHH
Confidence 77 5556666655 7889999999999887544
No 128
>cd00161 RICIN Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture.
Probab=98.90 E-value=4.6e-09 Score=92.08 Aligned_cols=81 Identities=35% Similarity=0.660 Sum_probs=64.2
Q ss_pred ccccccc-ccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeecC-CCeeeecCCCCCCCCCceEEEeC
Q psy10463 515 GRIRHVQ-THKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIATD-ESVCLDVPEYENDISPRVRILAC 592 (605)
Q Consensus 515 G~ir~~~-~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~~-~~~CLd~~~~~~~~g~~v~l~~C 592 (605)
|.|++.. +++|||+.+.. +|+.|.+++| ++...+|.|.++ ..|.++.. +++||++.+.. .|..+.+++|
T Consensus 1 ~~~~~~~~~~~cL~~~~~~-----~~~~v~~~~c-~~~~~~Q~W~~~-~~g~~~~~~~~~Cl~~~~~~--~~~~~~~~~c 71 (124)
T cd00161 1 GTIRNVNNTGLCLDVNGGS-----DGGPVQLYPC-HGNGNNQKWTLT-SDGTIRIKSSNLCLDVGGDA--PGSKVRLYTC 71 (124)
T ss_pred CeeEeCCCCCeEEECCCCC-----CCCEEEEEEC-CCCCccCCEEEe-CCCeEEEcCCCeEEcccCCC--CCCEEEEEEC
Confidence 3566666 89999987642 3678999999 664589999999 68888865 57999987654 4679999999
Q ss_pred CC-CCCcceEeCC
Q psy10463 593 SG-FNRQRWTYDK 604 (605)
Q Consensus 593 ~~-~~~Q~W~~~~ 604 (605)
++ ..+|+|.+..
T Consensus 72 ~~~~~~Q~W~~~~ 84 (124)
T cd00161 72 SGGSDNQRWTFNK 84 (124)
T ss_pred CCCCcCCEEEECC
Confidence 98 4499999864
No 129
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=98.85 E-value=1.3e-08 Score=114.87 Aligned_cols=102 Identities=8% Similarity=-0.060 Sum_probs=82.7
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHH-hcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCC--Ccch
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVI-SRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG--RVGL 163 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~-~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~--~~G~ 163 (605)
++.|.+||+||+|||+ ..+.+++++++ .+.||+ +||++++|++++.|. +.+++..++++ .++++.... +.|+
T Consensus 60 ~~~~~vsIlVPa~nE~-~vi~~~i~~ll~~ldYP~--~eI~vi~~~nD~~T~-~~~~~l~~~~p-~~~~v~~~~~g~~gK 134 (727)
T PRK11234 60 PDEKPLAIMVPAWNET-GVIGNMAELAATTLDYEN--YHIFVGTYPNDPATQ-ADVDAVCARFP-NVHKVVCARPGPTSK 134 (727)
T ss_pred CCCCCEEEEEecCcch-hhHHHHHHHHHHhCCCCC--eEEEEEecCCChhHH-HHHHHHHHHCC-CcEEEEeCCCCCCCH
Confidence 5679999999999999 99999999987 689998 799999998877774 45777766664 455544443 7899
Q ss_pred HHHHHHHhhhc-------c--CceEEEecCccccccccc
Q psy10463 164 IKARLLGARQA-------E--GEILVFLDAHCECTLVFN 193 (605)
Q Consensus 164 ~~a~n~g~~~a-------~--g~~i~~lD~d~~~~~~~~ 193 (605)
+.|.|.|+..+ . .+.+++.|+|+.+.++++
T Consensus 135 a~aLN~~l~~~~~~e~~~~~~~~vvvi~DAD~~v~pd~L 173 (727)
T PRK11234 135 ADCLNNVLDAITQFERSANFAFAGFILHDAEDVISPMEL 173 (727)
T ss_pred HHHHHHHHHHHHhhhcccCCcccEEEEEcCCCCCChhHH
Confidence 99999999987 3 356788999998876554
No 130
>PF14200 RicinB_lectin_2: Ricin-type beta-trefoil lectin domain-like; PDB: 2X2S_C 2X2T_A 2VSE_B 2VSA_A 3EF2_A 2IHO_A 3HZB_H 1YBI_B 3PHZ_A 3NBE_A ....
Probab=98.83 E-value=6.4e-09 Score=89.15 Aligned_cols=85 Identities=16% Similarity=0.243 Sum_probs=68.1
Q ss_pred ccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecC-Cce--ee-cCCCeeeecCCCCCCCCCceEE
Q psy10463 514 FGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLP-TDL--IA-TDESVCLDVPEYENDISPRVRI 589 (605)
Q Consensus 514 ~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~-~g~--i~-~~~~~CLd~~~~~~~~g~~v~l 589 (605)
.-.|++..+++|||+.+... .+|+.|.+++| ++ ..+|+|.+... +|. |+ ..+++|||+.+...++|+.|.+
T Consensus 16 ~Y~i~n~~sg~~L~v~~~~~---~~g~~v~~~~~-~~-~~~Q~W~i~~~~~g~y~I~n~~s~~~Ldv~~~~~~~g~~v~~ 90 (105)
T PF14200_consen 16 YYKIRNVNSGKYLDVAGGST---ANGTNVQQWTC-NG-NDNQQWKIEPVGDGYYRIRNKNSGKVLDVAGGSTANGTNVQQ 90 (105)
T ss_dssp EEEEEETTTTEEEEEGCTTC---STTEBEEEEES-SS-SGGGEEEEEESTTSEEEEEETSTTEEEEEGGGSSSTTEBEEE
T ss_pred EEEEEECCCCCEEEeCCCCc---CCCcEEEEecC-CC-CcCcEEEEEEecCCeEEEEECCCCcEEEECCCCCCCCCEEEE
Confidence 45788888999999987665 57899999999 55 78999998733 343 33 3568999999888888999999
Q ss_pred EeC-CCCCCcceEeC
Q psy10463 590 LAC-SGFNRQRWTYD 603 (605)
Q Consensus 590 ~~C-~~~~~Q~W~~~ 603 (605)
++| ++..+|+|.+.
T Consensus 91 ~~~~~~~~~Q~W~l~ 105 (105)
T PF14200_consen 91 WEYDNGSDNQQWKLE 105 (105)
T ss_dssp EE-STSSGGGEEEEE
T ss_pred EeCCCCCccCEEEeC
Confidence 999 77669999873
No 131
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=98.80 E-value=2.9e-08 Score=89.60 Aligned_cols=94 Identities=31% Similarity=0.390 Sum_probs=78.5
Q ss_pred EEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhhh
Q psy10463 94 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQ 173 (605)
Q Consensus 94 iiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~~ 173 (605)
||||+||+. ..|..++.|+..+.+.. .|++|+||+|++.+... +.+.... ...+..+....+.|.+.++|.++..
T Consensus 1 iii~~~~~~-~~l~~~l~s~~~~~~~~--~~i~i~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~ 75 (156)
T cd00761 1 VIIPAYNEE-PYLERCLESLLAQTYPN--FEVIVVDDGSTDGTLEI-LEEYAKK-DPRVIRVINEENQGLAAARNAGLKA 75 (156)
T ss_pred CEEeecCcH-HHHHHHHHHHHhCCccc--eEEEEEeCCCCccHHHH-HHHHHhc-CCCeEEEEecCCCChHHHHHHHHHH
Confidence 689999998 99999999999998744 79999999999987543 3333222 2357788889999999999999999
Q ss_pred ccCceEEEecCcccccccc
Q psy10463 174 AEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 174 a~g~~i~~lD~d~~~~~~~ 192 (605)
+.+++++++|+|+...+.+
T Consensus 76 ~~~d~v~~~d~D~~~~~~~ 94 (156)
T cd00761 76 ARGEYILFLDADDLLLPDW 94 (156)
T ss_pred hcCCEEEEECCCCccCccH
Confidence 9999999999999876543
No 132
>cd00161 RICIN Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture.
Probab=98.80 E-value=1.5e-08 Score=88.74 Aligned_cols=81 Identities=20% Similarity=0.356 Sum_probs=65.0
Q ss_pred ccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeec-CCCeeeecCCCCCCCCCceEEEeC
Q psy10463 514 FGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT-DESVCLDVPEYENDISPRVRILAC 592 (605)
Q Consensus 514 ~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~-~~~~CLd~~~~~~~~g~~v~l~~C 592 (605)
.|.++...+++|||+.+.. +|.++.+++| ++...+|+|.+. ..+.|++ .+++|||+.+... +|..|.+++|
T Consensus 43 ~g~~~~~~~~~Cl~~~~~~-----~~~~~~~~~c-~~~~~~Q~W~~~-~~~~i~~~~~~~cl~~~~~~~-~~~~v~~~~c 114 (124)
T cd00161 43 DGTIRIKSSNLCLDVGGDA-----PGSKVRLYTC-SGGSDNQRWTFN-KDGTIRNLKSGKCLDVKGGNT-NGTNLILWTC 114 (124)
T ss_pred CCeEEEcCCCeEEcccCCC-----CCCEEEEEEC-CCCCcCCEEEEC-CCcEEEECCCCeEEeCCCCCC-CCCEEEEEeC
Confidence 4777776678999986542 3688999999 554679999998 6577775 3579999987655 6789999999
Q ss_pred CCCCCcceEe
Q psy10463 593 SGFNRQRWTY 602 (605)
Q Consensus 593 ~~~~~Q~W~~ 602 (605)
++..+|+|.+
T Consensus 115 ~~~~~Q~W~~ 124 (124)
T cd00161 115 DGGPNQKWKF 124 (124)
T ss_pred CCCccceEeC
Confidence 9888999975
No 133
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=98.70 E-value=1.2e-07 Score=106.65 Aligned_cols=105 Identities=16% Similarity=0.080 Sum_probs=78.9
Q ss_pred CCCCcEEEEEEeecCchH----HHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHH---HHHHHHhc--CCCeEEeec
Q psy10463 87 EFLPKSSIVIVFHNEAWS----ALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSS---LDEYVAKL--SVPTRVIRS 157 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~----~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~---~~~~~~~~--~~~v~~~~~ 157 (605)
...|+++|+||+|||+.+ .|..+++|+..+.+++ .+|++|+||++++++.... ..+..++. ..++.+.+.
T Consensus 121 ~~~~~VaVliP~yNEd~~~v~~~L~a~~~Sl~~~~~~~-~~e~~vLdD~~d~~~~~~e~~~~~~L~~~~~~~~~i~yr~R 199 (691)
T PRK05454 121 PPEARTAILMPIYNEDPARVFAGLRAMYESLAATGHGA-HFDFFILSDTRDPDIAAAEEAAWLELRAELGGEGRIFYRRR 199 (691)
T ss_pred CCCCceEEEEeCCCCChHHHHHHHHHHHHHHHhcCCCC-CEEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCcEEEEEC
Confidence 557899999999999853 6888999999888754 3899999999999874322 23444444 345788777
Q ss_pred CCCcc-hHHHHHHHhhh--ccCceEEEecCcccccccc
Q psy10463 158 PGRVG-LIKARLLGARQ--AEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 158 ~~~~G-~~~a~n~g~~~--a~g~~i~~lD~d~~~~~~~ 192 (605)
.+|.| ++++.|..++. +.+||++.+|+|..+.+++
T Consensus 200 ~~n~~~KaGNl~~~~~~~~~~~eyivvLDADs~m~~d~ 237 (691)
T PRK05454 200 RRNVGRKAGNIADFCRRWGGAYDYMVVLDADSLMSGDT 237 (691)
T ss_pred CcCCCccHHHHHHHHHhcCCCcCEEEEEcCCCCCCHHH
Confidence 76665 45566666877 5669999999999886544
No 134
>KOG2547|consensus
Probab=98.69 E-value=1.4e-07 Score=94.39 Aligned_cols=202 Identities=13% Similarity=0.121 Sum_probs=139.7
Q ss_pred ccCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCC-CCEEEEeCCCCCChHH
Q psy10463 195 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLS-VPTRVIRSPGRVGLIK 273 (605)
Q Consensus 195 ~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~-~~v~~i~~~~n~G~~~ 273 (605)
+.+|.||||.|...-. +.+...++|.....|+. +|++.+-+.++|+..+ .++.+.+++| ...+++-..+..|..-
T Consensus 82 ~~LPgVSiikPl~G~d-~nl~~Nlesffts~Y~~--~ElLfcv~s~eDpAi~-vv~~Ll~kyp~VdAklf~gG~~vg~np 157 (431)
T KOG2547|consen 82 PKLPGVSIIKPLKGVD-PNLYHNLESFFTSQYHK--YELLFCVESSEDPAIE-VVERLLKKYPNVDAKLFFGGEKVGLNP 157 (431)
T ss_pred CCCCCceEEeecccCC-chhHHhHHHHHhhccCc--eEEEEEEccCCCcHHH-HHHHHHhhCCCcceEEEEcccccccCh
Confidence 4799999999999999 99999999999988875 8999998888888544 8899999998 2347888777788644
Q ss_pred HHH---HHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCCeeEEecccccceeeeeccceeeE
Q psy10463 274 ARL---LGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRW 349 (605)
Q Consensus 274 arN---~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~ 349 (605)
-.| -|.+.|+.|+|+|.|+|..+.||.+-.|...+..+.+ +.|+..-...| ++||+-.+.-.+
T Consensus 158 KInN~mpgy~~a~ydlvlisDsgI~m~pdtildm~t~M~shekmalvtq~py~~d-------------r~Gf~atle~~~ 224 (431)
T KOG2547|consen 158 KINNMMPGYRAAKYDLVLISDSGIFMKPDTILDMATTMMSHEKMALVTQTPYCKD-------------RQGFDATLEQVY 224 (431)
T ss_pred hhhccCHHHHHhcCCEEEEecCCeeecCchHHHHHHhhhcccceeeecCCceeec-------------cccchhhhhhee
Confidence 433 6899999999999999999999999999999987655 33332111111 344432222111
Q ss_pred eec-CchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEe
Q psy10463 350 YTY-GSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIA 419 (605)
Q Consensus 350 ~~~-~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~ 419 (605)
..- +.+.. .......+. +.+|-..++||+++++.||+- .+..|-.||+=+...+...|++..+.
T Consensus 225 fgTsh~r~y---l~~n~~~~~--c~tgms~~mrK~~ld~~ggi~-~f~~yLaedyFaaksllSRG~ksais 289 (431)
T KOG2547|consen 225 FGTSHPRIY---LSGNVLGFN--CSTGMSSMMRKEALDECGGIS-AFGGYLAEDYFAAKSLLSRGWKSAIS 289 (431)
T ss_pred eccCCceEE---Ecccccccc--ccccHHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHHhhhhhhhhc
Confidence 110 00000 000011111 222334468999999999983 44445579998888888888775443
No 135
>KOG3916|consensus
Probab=98.68 E-value=2.4e-07 Score=91.76 Aligned_cols=149 Identities=21% Similarity=0.322 Sum_probs=97.0
Q ss_pred CCcceEEEEeechhhHHHH---HHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHH
Q psy10463 197 LPKSSIVIVFHNEAWSALL---RTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIK 273 (605)
Q Consensus 197 ~p~vSVIIp~~n~~~~~l~---~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~ 273 (605)
.-+|.||||++|+. ..|. .-|..++.+..-+ +-|+||+...++. +..+.
T Consensus 150 r~kvAIIIPfR~Re-~HL~~~l~~LhP~LqrQrL~--y~iyVieQ~g~~~-------------------------FNRak 201 (372)
T KOG3916|consen 150 RHKVAIIIPFRNRE-EHLRYLLHHLHPFLQRQRLD--YRIYVIEQAGNKP-------------------------FNRAK 201 (372)
T ss_pred cceeEEEeecccHH-HHHHHHHHHhhHHHHhhhhc--eeEEEEEecCCCc-------------------------ccHHH
Confidence 34799999999999 6654 4455555554333 6777776544332 34455
Q ss_pred HHHHHHhhc----cCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeE
Q psy10463 274 ARLLGARQA----EGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRW 349 (605)
Q Consensus 274 arN~G~~~A----~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~ 349 (605)
-.|.|...| .-|-++|-|-|..+..|. ....||.. ..-.......+.+
T Consensus 202 L~NVGf~eAlkd~~wdCfIFHDVDllPenDr------------NlY~C~~~----------PRH~sva~dk~gy------ 253 (372)
T KOG3916|consen 202 LLNVGFLEALKDYGWDCFIFHDVDLLPENDR------------NLYGCPEQ----------PRHMSVALDKFGY------ 253 (372)
T ss_pred hhhhHHHHHHHhcCCCEEEEecccccccCCC------------CccCCCCC----------Ccchhhhhhhccc------
Confidence 578887776 346789999997764332 22223210 0000000001111
Q ss_pred eecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEE
Q psy10463 350 YTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEI 418 (605)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~ 418 (605)
..+-..+-||..++.++-|.+|.||...|-+|||||-||+-|+...|++|.-
T Consensus 254 -----------------~LPY~~~FGGVsalt~~qf~kINGFsN~fWGWGGEDDDl~nRv~~ag~~IsR 305 (372)
T KOG3916|consen 254 -----------------RLPYKEYFGGVSALTKEQFRKINGFSNAFWGWGGEDDDLWNRVQLAGMKISR 305 (372)
T ss_pred -----------------cccchhhhCchhhccHHHHHHhcCCCchhcccCCcchHHHHHHHhcCceeec
Confidence 1112346688889999999999999999999999999999999999999864
No 136
>smart00458 RICIN Ricin-type beta-trefoil. Carbohydrate-binding domain formed from presumed gene triplication.
Probab=98.68 E-value=5.7e-08 Score=84.64 Aligned_cols=78 Identities=24% Similarity=0.485 Sum_probs=61.4
Q ss_pred ccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeec-CCCeeeecCCCCCCCCCceEEEeC
Q psy10463 514 FGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT-DESVCLDVPEYENDISPRVRILAC 592 (605)
Q Consensus 514 ~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~-~~~~CLd~~~~~~~~g~~v~l~~C 592 (605)
-|.|++. +++|||+.+.. +.++.++.| ++...+|+|.+. ..+.|++ .+++|||+.+.... .++.+++|
T Consensus 38 ~g~~~~~-~~~Cl~~~~~~------~~~v~l~~c-~~~~~~Q~W~~~-~~~~i~~~~~~~cl~~~~~~~~--~~~~~~~c 106 (117)
T smart00458 38 DGAIRIA-TDLCLTANGNT------GSTVTLYSC-DGDADNQYWTVN-KDGTIRNPDSGLCLDVKDGNTG--TKVILWTC 106 (117)
T ss_pred CCeEEec-CCccCccCCCC------CCEEEEEEC-CCCCcCCEEEEC-CCeeEEeCCCCEEEecCCCCCC--ceEEEEeC
Confidence 4777776 78999986532 157899999 555789999998 6778875 47899999875432 47999999
Q ss_pred CCCCCcceEe
Q psy10463 593 SGFNRQRWTY 602 (605)
Q Consensus 593 ~~~~~Q~W~~ 602 (605)
++..+|+|.+
T Consensus 107 ~~~~~Q~W~~ 116 (117)
T smart00458 107 NGNPNQKWIF 116 (117)
T ss_pred CCCccccEEe
Confidence 9878999986
No 137
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase. Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane
Probab=98.64 E-value=2e-06 Score=93.95 Aligned_cols=210 Identities=16% Similarity=0.210 Sum_probs=138.9
Q ss_pred CCcceEEEEeech-hhHHHHHHHHHHHh---cCCCCCceeEEEeeCCC-Ch----HHHHHHHHHHHHHCC-CCEEEEeCC
Q psy10463 197 LPKSSIVIVFHNE-AWSALLRTVHSVIS---RSPRSMLKEILLVDDAS-TR----EFLKSSLDEYVAKLS-VPTRVIRSP 266 (605)
Q Consensus 197 ~p~vSVIIp~~n~-~~~~l~~~l~sl~~---q~~~~~~~eIIvVDd~S-~d----~~~~~~l~~~~~~~~-~~v~~i~~~ 266 (605)
..+|.||||..++ . +.+.+-++...+ ++... .-++||-.++ .+ ..+++.++++..+++ .++.+|...
T Consensus 246 ~~~V~iIvPl~~r~~-~~~~~Fl~~~~~~~l~~~~~--~~L~vV~~~~~~~~~~~~~ik~~l~~l~~k~~~~~i~~i~~~ 322 (499)
T PF05679_consen 246 STRVHIIVPLSGREA-DWFRRFLENFEKVCLETDDN--VFLTVVLFYDPSDSDSISQIKELLEELERKYPFSRIKWISVK 322 (499)
T ss_pred CCEEEEEEEecCccH-HHHHHHHHHHHHHhcccCCc--eEEEEEEecCcccchhHHHHHHHHHHHHHhCCccceEEEEec
Confidence 4779999999999 5 666655555433 23222 3455554443 22 123457778877765 468888887
Q ss_pred -CCCChHHHHHHHHhhc-cCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeecc
Q psy10463 267 -GRVGLIKARLLGARQA-EGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWE 344 (605)
Q Consensus 267 -~n~G~~~arN~G~~~A-~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~ 344 (605)
+.+..+.|...|++.. ..++++|+|.|..+++++|.+.-..-..+ .-|-.|++.. +|.+.... ++
T Consensus 323 ~~~fsr~~~Ld~g~~~~~~d~L~f~~Dvd~~f~~~fL~rcR~nti~g-~qvy~PI~Fs------~y~p~~~~--~~---- 389 (499)
T PF05679_consen 323 TGEFSRGAALDVGAKKFPPDSLLFFCDVDMVFTSDFLNRCRMNTIPG-KQVYFPIVFS------QYNPDIVY--AG---- 389 (499)
T ss_pred CCCccHHHHHHhhcccCCCCcEEEEEeCCcccCHHHHHHHHHhhhcC-cEEEEeeecc------ccCCcccc--cC----
Confidence 7788889999999865 45688889999999999999886655443 4556676531 12221100 00
Q ss_pred ceeeEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHh--CCCCcccccccchhhHHHHHHHHcC--CeEEEec
Q psy10463 345 LHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHI--GAYDEEMQVWGGENLEMSFRVWQCG--GSIEIAP 420 (605)
Q Consensus 345 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~i--GgfDe~~~~~g~ED~dl~~Rl~~~G--~~i~~~p 420 (605)
.+..............++ ...-|.+++-++.|.++ ||||.....||+||+||.-++.+.| ..+.-+|
T Consensus 390 -------~~~~~~~~~i~~~~G~w~--~~gfg~~~~YksDy~~~~~~~~~~~~~gwg~ED~~l~~~~l~~~~~l~V~Ra~ 460 (499)
T PF05679_consen 390 -------KPPEPDQFDISKDTGFWR--RFGFGMVCFYKSDYMRIRGGGFDLSIRGWGGEDVDLYDKFLKSGHKLHVFRAV 460 (499)
T ss_pred -------CCCccccCccCCCCCccc--cCCCceEEEEhhhhhhhcccccccccccccccHHHHHHHHHhCCCceEEEEcc
Confidence 000000000001111122 22336778899999999 9999999999999999999999999 8899999
Q ss_pred ceEEEEEcccC
Q psy10463 421 CSHVAHLFRKA 431 (605)
Q Consensus 421 ~s~v~H~~r~~ 431 (605)
+..+.|.++..
T Consensus 461 ep~L~h~yh~~ 471 (499)
T PF05679_consen 461 EPGLVHRYHPK 471 (499)
T ss_pred CCCeEEEeccc
Confidence 99999998654
No 138
>smart00458 RICIN Ricin-type beta-trefoil. Carbohydrate-binding domain formed from presumed gene triplication.
Probab=98.59 E-value=1.4e-07 Score=82.16 Aligned_cols=72 Identities=26% Similarity=0.514 Sum_probs=56.7
Q ss_pred cccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeecCCCeeeecCCCCCCCCCceEEEeCCC-CCCcc
Q psy10463 521 QTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIATDESVCLDVPEYENDISPRVRILACSG-FNRQR 599 (605)
Q Consensus 521 ~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~~~~~CLd~~~~~~~~g~~v~l~~C~~-~~~Q~ 599 (605)
.+++|||+.+. ++.|.+++| ++.+.+|.|.|+ ..|.++..+++||++.+... ..+.++.|++ ..+|+
T Consensus 5 ~~~~Cl~~~~~-------~~~v~l~~c-~~~~~~Q~w~~~-~~g~~~~~~~~Cl~~~~~~~---~~v~l~~c~~~~~~Q~ 72 (117)
T smart00458 5 NTGKCLDVNGN-------SNPVGLFDC-HGTGGNQLWKLT-SDGAIRIATDLCLTANGNTG---STVTLYSCDGDADNQY 72 (117)
T ss_pred cCCccEecCCC-------CceEEEEeC-CCCCccceEEEe-CCCeEEecCCccCccCCCCC---CEEEEEECCCCCcCCE
Confidence 57899998653 147899999 554678999999 88888864569999876421 5899999998 55999
Q ss_pred eEeCC
Q psy10463 600 WTYDK 604 (605)
Q Consensus 600 W~~~~ 604 (605)
|.+..
T Consensus 73 W~~~~ 77 (117)
T smart00458 73 WTVNK 77 (117)
T ss_pred EEECC
Confidence 99864
No 139
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=98.55 E-value=2.8e-07 Score=102.96 Aligned_cols=97 Identities=10% Similarity=0.047 Sum_probs=75.8
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHH-hcCCccCcceEEE---EeCCCchhhHHHHHHHHHHhcCCCeEEeecCCC--
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVI-SRSPRSMLKEILL---VDDASTREFLKSSLDEYVAKLSVPTRVIRSPGR-- 160 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~-~~~~~~~~~Eiiv---vdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~-- 160 (605)
...|.+||+||+|||+ +.|.++|++++ .+.||+ +||+| +||++|... +++....+ +.++++..+.+
T Consensus 68 ~~~~~vsIlVPa~nE~-~VI~~~v~~ll~~ldYp~--~~I~v~~~~nD~~T~~~----~~~~~~~~-p~~~~v~~~~~gp 139 (703)
T PRK15489 68 RDEQPLAIMVPAWKEY-DVIAKMIENMLATLDYRR--YVIFVGTYPNDAETITE----VERMRRRY-KRLVRVEVPHDGP 139 (703)
T ss_pred cCCCceEEEEeCCCcH-HHHHHHHHHHHhcCCCCC--eEEEEEecCCCccHHHH----HHHHhccC-CcEEEEEcCCCCC
Confidence 4568999999999999 99999999987 679997 69999 588866655 44444444 36777665554
Q ss_pred cchHHHHHHHhhhc-------cCce--EEEecCccccccc
Q psy10463 161 VGLIKARLLGARQA-------EGEI--LVFLDAHCECTLV 191 (605)
Q Consensus 161 ~G~~~a~n~g~~~a-------~g~~--i~~lD~d~~~~~~ 191 (605)
.|++.|.|.|+..+ .+++ ++..|+|+.+++.
T Consensus 140 ~gKa~ALN~~l~~~~~~e~~~~~~fa~vvi~DAEd~~~P~ 179 (703)
T PRK15489 140 TCKADCLNWIIQAIFRYEAGHGIEFAGVILHDSEDVLHPL 179 (703)
T ss_pred CCHHHHHHHHHHHHHhhhhhccCccceEEEEcCCCCCChh
Confidence 78999999999886 3444 8999999988754
No 140
>PF00652 Ricin_B_lectin: Ricin-type beta-trefoil lectin domain; InterPro: IPR000772 Ricin is a legume lectin from the seeds of the castor bean plant, Ricinus communis. The seeds are poisonous to people, animals and insects and just one milligram of ricin can kill an adult. Primary structure analysis has shown the presence of a similar domain in many carbohydrate-recognition proteins like plant and bacterial AB-toxins, glycosidases or proteases [, , ]. This domain, known as the ricin B lectin domain, can be present in one or more copies and has been shown in some instance to bind simple sugars, such as galactose or lactose. The ricin B lectin domain is composed of three homologous subdomains of 40 amino acids (alpha, beta and gamma) and a linker peptide of around 15 residues (lambda). It has been proposed that the ricin B lectin domain arose by gene triplication from a primitive 40 residue galactoside-binding peptide [, ]. The most characteristic, though not completely conserved, sequence feature is the presence of a Q-W pattern. Consequently, the ricin B lectin domain as also been refered as the (QxW)3 domain and the three homologous regions as the QxW repeats [, ]. A disulphide bond is also conserved in some of the QxW repeats []. The 3D structure of the ricin B chain has shown that the three QxW repeats pack around a pseudo threefold axis that is stabilised by the lambda linker []. The ricin B lectin domain has no major segments of a helix or beta sheet but each of the QxW repeats contains an omega loop []. An idealized omega-loop is a compact, contiguous segment of polypeptide that traces a 'loop-shaped' path in three-dimensional space; the main chain resembles a Greek omega.; PDB: 2VLC_B 3A22_B 3A21_B 3A23_B 1GGP_B 1VCL_A 2Z48_B 2Z49_A 2D7R_A 2D7I_A ....
Probab=98.44 E-value=2.9e-07 Score=80.93 Aligned_cols=77 Identities=23% Similarity=0.466 Sum_probs=58.9
Q ss_pred ccccccc-ccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceeec-CCCeeeecCCCCCCCCCceEEEeC
Q psy10463 515 GRIRHVQ-THKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIAT-DESVCLDVPEYENDISPRVRILAC 592 (605)
Q Consensus 515 G~ir~~~-~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~~-~~~~CLd~~~~~~~~g~~v~l~~C 592 (605)
|.|++.. .++||++.+.. +|+++.+++| +....+|.|.+. ..+.|++ .+++||++.+.. .+..|.+++|
T Consensus 46 ~~i~~~~~~~~CL~~~~~~-----~~~~i~l~~C-~~~~~~Q~W~~~-~~~~i~n~~s~~cL~~~~~~--~~~~l~~~~c 116 (124)
T PF00652_consen 46 GQIRSNNNPNLCLDVDGSS-----PGTKIVLWPC-DSNSSNQRWKFD-PDGRIRNKNSGLCLDVKGGS--DGNPLVLWPC 116 (124)
T ss_dssp SBEEETTETTEEEEESSSS-----TTEBEEEEET-TTTGGGGBEEEE-TTSBEEETTTTEEEEEGGGS--TTEBEEEEE-
T ss_pred CceeeccCcceEEEeeccC-----CCceEEEeec-cCCccCCeEEEc-CCeeEEeCCCCEEEEecCCC--CCCEEEEEEC
Confidence 6676655 34599987653 3678999999 555667999999 6677774 468999998754 4789999999
Q ss_pred CCCCCcce
Q psy10463 593 SGFNRQRW 600 (605)
Q Consensus 593 ~~~~~Q~W 600 (605)
++..+|+|
T Consensus 117 ~~~~~Q~W 124 (124)
T PF00652_consen 117 NGSPNQQW 124 (124)
T ss_dssp TSSGGGBE
T ss_pred CCCccccC
Confidence 76669999
No 141
>PLN02893 Cellulose synthase-like protein
Probab=98.36 E-value=1.4e-05 Score=88.88 Aligned_cols=188 Identities=11% Similarity=0.097 Sum_probs=113.0
Q ss_pred CCCCcEEEEEEe---ecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHH--HHHhcCCCeEEeecCCCc
Q psy10463 87 EFLPKSSIVIVF---HNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDE--YVAKLSVPTRVIRSPGRV 161 (605)
Q Consensus 87 ~~~p~~Siiip~---yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~--~~~~~~~~v~~~~~~~~~ 161 (605)
+++|.+.|.|++ +.|..-....|+-|+++-.||....-+-|-|||.+.-|.....+. +++.-=|=+|-..-+.|.
T Consensus 98 ~~lP~vDvfv~TaDP~~Epp~~~~ntvLSilA~dyp~~kls~YvSDDGgs~lt~~al~Eaa~FA~~WvPFCrk~~ie~R~ 177 (734)
T PLN02893 98 SDYPGLDVFICTADPYKEPPMGVVNTALSVMAYDYPTEKLSVYVSDDGGSKLTLFAFMEAAKFATHWLPFCKKNKIVERC 177 (734)
T ss_pred ccCCcceeeeccCCcccCchHHHHHHHHHHHhhccCccceEEEEecCCccHHHHHHHHHHHHHHHhhcccccccCCCcCC
Confidence 569999999999 788878889999999999999977889999999999997665543 222211112211111111
Q ss_pred chHHHHHHHhhhccCceEEEecCccccccccccccCCcceEEEEeechhhHHHHHHHHHHHhc-----------------
Q psy10463 162 GLIKARLLGARQAEGEILVFLDAHCECTLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISR----------------- 224 (605)
Q Consensus 162 G~~~a~n~g~~~a~g~~i~~lD~d~~~~~~~~~~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q----------------- 224 (605)
-.+ -.... ++ ....+|.. ...+ .+.++..|+++.+.
T Consensus 178 P~~---YF~~~-----------~~-~~~~e~~~-----------~k~~-Yee~k~ri~~~~~~~~~~~~~~~~~~~~~~f 230 (734)
T PLN02893 178 PEA---YFSSN-----------SH-SWSPETEQ-----------IKMM-YESMKVRVENVVERGKVSTDYITCDQEREAF 230 (734)
T ss_pred HHH---HhccC-----------CC-ccchHHHH-----------HHHH-HHHHHHHHHHHHhcCcCchhhhhhccccccc
Confidence 000 00000 00 00001100 0011 14445555554211
Q ss_pred ----------CCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCC-----hHHHHHHHHhh----ccCC
Q psy10463 225 ----------SPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVG-----LIKARLLGARQ----AEGE 285 (605)
Q Consensus 225 ----------~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G-----~~~arN~G~~~----A~gd 285 (605)
..+. ..+ |+.|+.+..+ .. . ..+| .+.++..+++.| .++|.|.+++. +.|+
T Consensus 231 ~~w~~~~~~~dH~~-ivq-V~l~~~~~~d-~~----g--~~lP-~lvYvsReKrp~~~Hh~KAGaLN~llrvS~~~Tngp 300 (734)
T PLN02893 231 SRWTDKFTRQDHPT-VIQ-VLLESGKDKD-IT----G--HTMP-NLIYVSREKSKNSPHHFKAGALNTLLRVSATMTNAP 300 (734)
T ss_pred ccCcCCCCCCCCCc-eee-eeccCCCccc-hh----h--ccCC-ceEEEeCCCCCCCCcccccchHHHHHHhhcccCCCC
Confidence 1111 112 2234433222 11 1 2366 899998888754 68999999985 7899
Q ss_pred EEEEecCCccc-CcChHHHHHHHHHcC
Q psy10463 286 ILVFLDAHCEC-TLGWLENLVARVAED 311 (605)
Q Consensus 286 ~i~flD~D~~~-~~~~L~~ll~~~~~~ 311 (605)
||+.+|+|..+ +|+.|.+.+-.+.+.
T Consensus 301 fIl~lDcD~y~n~p~~l~~amcff~Dp 327 (734)
T PLN02893 301 IILTLDCDMYSNDPQTPLRALCYLLDP 327 (734)
T ss_pred EEEEecCCcCCCchhHHHHHHHHhcCC
Confidence 99999999996 689999999988653
No 142
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=98.33 E-value=4.6e-06 Score=85.55 Aligned_cols=96 Identities=15% Similarity=0.177 Sum_probs=72.4
Q ss_pred EEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCC----C-------
Q psy10463 92 SSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG----R------- 160 (605)
Q Consensus 92 ~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~----~------- 160 (605)
+.|||++||.. ++|.++|+|+++|.|....+||||.+|||.+++. +.+..+ ...++++.+.. +
T Consensus 2 ~PVlv~ayNRp-~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~~-~~v~~~----~~~i~~i~~~~~~~~~~~~~~~~ 75 (334)
T cd02514 2 IPVLVIACNRP-DYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEVA-DVAKSF----GDGVTHIQHPPISIKNVNPPHKF 75 (334)
T ss_pred cCEEEEecCCH-HHHHHHHHHHHhccccCCCceEEEEeCCCchHHH-HHHHhh----ccccEEEEcccccccccCccccc
Confidence 57999999999 9999999999998544334899999999988753 333333 23466666432 2
Q ss_pred ---cchHH----HHHHHhhhccCceEEEecCccccccccc
Q psy10463 161 ---VGLIK----ARLLGARQAEGEILVFLDAHCECTLVFN 193 (605)
Q Consensus 161 ---~G~~~----a~n~g~~~a~g~~i~~lD~d~~~~~~~~ 193 (605)
.+++. |+|.+...+.++++++||.|+.+.+++.
T Consensus 76 ~~y~~ia~hyk~aln~vF~~~~~~~vIILEDDl~~sPdFf 115 (334)
T cd02514 76 QGYYRIARHYKWALTQTFNLFGYSFVIILEDDLDIAPDFF 115 (334)
T ss_pred chhhHHHHHHHHHHHHHHHhcCCCEEEEECCCCccCHhHH
Confidence 23344 8888888889999999999999986553
No 143
>PF11397 GlcNAc: Glycosyltransferase (GlcNAc); InterPro: IPR021067 GlcNAc is an enzyme that carries out the first glycosylation step of hydroxylated Skp1; it is found in the cytoplasm and results in a pentasaccharide-linked 'HyPro-143[, ].
Probab=98.24 E-value=7e-05 Score=77.37 Aligned_cols=224 Identities=18% Similarity=0.206 Sum_probs=131.8
Q ss_pred ceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHH--H---------------HHHHHHHHH-------
Q psy10463 200 SSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFL--K---------------SSLDEYVAK------- 255 (605)
Q Consensus 200 vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~--~---------------~~l~~~~~~------- 255 (605)
|=|.|..|... .+..||.+++++.......-|-||+.....+.. . +....+...
T Consensus 2 IFvsiasyRD~--~c~~Tl~~~~~~A~~P~r~~~gv~~Q~~~~~~~c~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 79 (343)
T PF11397_consen 2 IFVSIASYRDP--ECAPTLKDLFARATNPERLFVGVVWQHYEEDPPCLSEGAPMDPGVHAAREEECVYCFLASSACAEWP 79 (343)
T ss_pred EEEEEeeecCc--hHHHHHHHHHHhcCCCceEEEEEEEEecCCCCcccccccccccccccccccchhhhhhhcccccccc
Confidence 34667777775 588999999988633323455566543222111 0 000111111
Q ss_pred ------CCCCEEEEeC--CCCCChHHHHHHHHhhccC-CEEEEecCCcccCcChHHHHHHHHHc--CCcEEEeeeEeeec
Q psy10463 256 ------LSVPTRVIRS--PGRVGLIKARLLGARQAEG-EILVFLDAHCECTLGWLENLVARVAE--DRTRVVCPVIDIIS 324 (605)
Q Consensus 256 ------~~~~v~~i~~--~~n~G~~~arN~G~~~A~g-d~i~flD~D~~~~~~~L~~ll~~~~~--~~~~vv~p~i~~i~ 324 (605)
...+|++++. ..-.|...||+.+.+.-+| +|.+.+|+|+.+.++|=+.|++.+.. ++..|.+.--..++
T Consensus 80 ~~~~~~~~~~Ir~~~~~~~~a~Gp~~AR~la~~l~~gE~y~LqiDSH~rF~~~WD~~li~~~~~~~~~~aVLS~YP~~~~ 159 (343)
T PF11397_consen 80 DGALCLRSDQIRVIRVDASEARGPCWARYLAQKLYRGEDYYLQIDSHMRFVPGWDEILIEMLKSLRNPKAVLSTYPPGYE 159 (343)
T ss_pred cccccccCCeEEEEEeCHHHCcChHHHHHHHHHHhCCCeEEEEEeccceeeccHHHHHHHHHHhcCCCCeEEecCCCCcc
Confidence 1135666554 4468999999999988876 58999999999999999999998876 34455542211111
Q ss_pred C--CeeEEeccc--ccceeeeeccceeeEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccc-ccc
Q psy10463 325 D--VTFAYVRSF--ELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQ-VWG 399 (605)
Q Consensus 325 ~--~~~~~~~~~--~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~-~~g 399 (605)
. ......... .+....|.- ............. ......|..++..++|+++-+-++..++ .||+.+. ++.
T Consensus 160 ~~~~~~~~~~~~~~~lc~~~~~~---~g~~~~~~~~~~~-~~~~~~P~~~~f~aaGF~Fa~~~~~~eV-P~DP~lp~lF~ 234 (343)
T PF11397_consen 160 PDGGQPEPEKTTVPRLCAARFGP---DGMVRLGARWIKP-APKLEEPVPQPFWAAGFSFAPGHFVREV-PYDPHLPFLFD 234 (343)
T ss_pred cccCCccccCCcccEEEEeEECC---CCcEeecceeccc-ccccCCCeeeceecccEEEcchhheecC-CCCCCcccccc
Confidence 1 000000000 000111100 0011111111111 1122456667777766665555555554 8999872 346
Q ss_pred chhhHHHHHHHHcCCeEEEecceEEEEEccc
Q psy10463 400 GENLEMSFRVWQCGGSIEIAPCSHVAHLFRK 430 (605)
Q Consensus 400 ~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r~ 430 (605)
||++-++.|+|-.|+.++.-+...++|.+..
T Consensus 235 GEE~~~aaRlwT~GYD~Y~P~~~v~~H~Y~r 265 (343)
T PF11397_consen 235 GEEISMAARLWTHGYDFYSPTRNVLFHLYSR 265 (343)
T ss_pred cHHHHHHHHHHHcCCccccCCCceeEEEccC
Confidence 9999999999999999999999999999974
No 144
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=97.85 E-value=0.00067 Score=71.47 Aligned_cols=192 Identities=17% Similarity=0.221 Sum_probs=96.2
Q ss_pred cCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCC--------
Q psy10463 196 FLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG-------- 267 (605)
Q Consensus 196 ~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~-------- 267 (605)
..+.+-|+|.++|++ ..+.+||+++++..+....+.|||-.||+... +.+.+..+.. .+++++...
T Consensus 91 ~~~~~pVlV~AcNRp-~yl~r~L~sLl~~rp~~~~fpIiVSQDg~~~~-~~~vi~~y~~----~v~~i~~~~~~~i~~~~ 164 (434)
T PF03071_consen 91 KEPVIPVLVFACNRP-DYLRRTLDSLLKYRPSAEKFPIIVSQDGDDEE-VAEVIKSYGD----QVTYIQHPDFSPITIPP 164 (434)
T ss_dssp ------EEEEESS-T-T-HHHHHHHHHHH-S-TTTS-EEEEE-TT-HH-HHHHHHGGGG----GSEEEE-S--S-----T
T ss_pred CCCcceEEEEecCCc-HHHHHHHHHHHHcCCCCCCccEEEEecCCcHH-HHHHHHHhhh----hheeeecCCcCCceeCc
Confidence 466788999999999 99999999999976554457899999998765 3444554422 345554321
Q ss_pred -CCChH----HHHH--HHHhh----ccCCEEEEecCCcccCcChHHHHHHH---HHcCCcE-EEeeeEeeecCCeeEEec
Q psy10463 268 -RVGLI----KARL--LGARQ----AEGEILVFLDAHCECTLGWLENLVAR---VAEDRTR-VVCPVIDIISDVTFAYVR 332 (605)
Q Consensus 268 -n~G~~----~arN--~G~~~----A~gd~i~flD~D~~~~~~~L~~ll~~---~~~~~~~-vv~p~i~~i~~~~~~~~~ 332 (605)
...+. -|+. .|+.. -..+.++++.+|.++.||+++-+.+. +++++.. .+++- +++.
T Consensus 165 ~~~~~~~y~~IA~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf~~~~~ll~~D~sl~ciSaw----NdnG----- 235 (434)
T PF03071_consen 165 KEKKFKGYYKIARHYKWALSQVFNKFKYSSVIILEDDLEISPDFFEYFSATLPLLENDPSLWCISAW----NDNG----- 235 (434)
T ss_dssp T-GGGHHHHHHHHHHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHHHHHHHHHHH-TTEEEEES------TT------
T ss_pred ccccccchHHHHHHHHHHHHHHHHhcCCceEEEEecCcccCccHHHHHHHHHHHHhcCCCeEEEEcc----ccCC-----
Confidence 10111 1222 22222 25688999999999999998877664 4555442 22211 0000
Q ss_pred ccccceeeeeccceeeEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHH-HH
Q psy10463 333 SFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRV-WQ 411 (605)
Q Consensus 333 ~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl-~~ 411 (605)
.........+...+++..+.|-..|+.|+.|+++.. .|-..-+|.++|. .+
T Consensus 236 ----------------------~~~~~~~~~~~~lyRsdffpglGWml~r~~w~el~~------~Wp~~~WDdwmR~~~~ 287 (434)
T PF03071_consen 236 ----------------------KEHFVDDSRPSLLYRSDFFPGLGWMLTRELWDELEP------KWPKAFWDDWMRQPEQ 287 (434)
T ss_dssp ----------------------BGGGS-TT-TT-EEEESS---SSEEEEHHHHHHHGG------G--SS-HHHHHTSHHH
T ss_pred ----------------------ccccccCCCccceEecccCCchHHHhhHHHHHhhcc------cCCCCCchhhhcCccc
Confidence 000000112344567777888889999999998752 2333447777773 23
Q ss_pred cCCeEEEecc-eEEEEEccc
Q psy10463 412 CGGSIEIAPC-SHVAHLFRK 430 (605)
Q Consensus 412 ~G~~i~~~p~-s~v~H~~r~ 430 (605)
..+|-.+.|+ ++++|..+.
T Consensus 288 rkgR~cIrPeisRt~~fg~~ 307 (434)
T PF03071_consen 288 RKGRQCIRPEISRTYHFGKK 307 (434)
T ss_dssp HTT-EEEEESSBSEEE--SS
T ss_pred cCCCceeeccCCCccccCcC
Confidence 3445444455 457776543
No 145
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=97.85 E-value=7.5e-05 Score=80.91 Aligned_cols=135 Identities=16% Similarity=0.151 Sum_probs=78.1
Q ss_pred HHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCch
Q psy10463 277 LGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSS 355 (605)
Q Consensus 277 ~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~ 355 (605)
.|+.....|||+++|+|+.+.|+.+..|+..+.+++. ..+|+.+..-+.. .. .-.....|.+. -+.
T Consensus 195 ~g~~~~~~~~il~~DaDt~~~p~~~~~lv~~m~~d~~i~gvCG~t~i~n~~-~s----~~t~~Q~fEY~--------ish 261 (527)
T PF03142_consen 195 IGVDPDFYEYILMVDADTKFDPDSVNRLVDAMERDPKIGGVCGETRIDNKG-QS----WWTMYQVFEYA--------ISH 261 (527)
T ss_pred hccCccceEEEEEecCCceEcHHHHHHHHHHHcCCCCeEEEeceeEEcCCC-CC----Hhhheeccchh--------HHH
Confidence 3555566799999999999999999999999987765 6777654222211 00 00001111111 111
Q ss_pred hHhhhccCCCCccccccccceEEEEeHHHHhH--------------hCCCCc---------ccccccchhhHHHHHHHHc
Q psy10463 356 DAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFH--------------IGAYDE---------EMQVWGGENLEMSFRVWQC 412 (605)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~--------------iGgfDe---------~~~~~g~ED~dl~~Rl~~~ 412 (605)
...+....... .+....|++-++|-+.... +.+|.+ .+ ..-+||--|+--+.+.
T Consensus 262 ~l~Ka~Es~fG--~VtCLPGcfsmyR~~a~~~~~~~~~p~l~~~~i~~~Y~~~~~dtlh~~nl-~~lGEDR~LttLlLk~ 338 (527)
T PF03142_consen 262 HLQKAFESVFG--SVTCLPGCFSMYRISALMDGDGYWVPLLISPDIIEKYSENPVDTLHQKNL-LDLGEDRWLTTLLLKQ 338 (527)
T ss_pred HHHHHHHHHhC--ceeecCCcceeeeeehhccccccccccccchHHHHHHhhccchHHHHHhh-hhcchhHHHHHHHHhh
Confidence 11111111111 2345667777766655443 112211 11 1358999999887776
Q ss_pred --CCeEEEecceEEEEE
Q psy10463 413 --GGSIEIAPCSHVAHL 427 (605)
Q Consensus 413 --G~~i~~~p~s~v~H~ 427 (605)
|+++.++|.|...-.
T Consensus 339 ~~~~k~~y~~~A~a~T~ 355 (527)
T PF03142_consen 339 FPGYKTEYVPSAVAYTD 355 (527)
T ss_pred CCCceEEEccccccccc
Confidence 789999999876533
No 146
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=97.26 E-value=0.0028 Score=62.71 Aligned_cols=119 Identities=18% Similarity=0.171 Sum_probs=83.9
Q ss_pred cCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeE-EEeeCCCChHHHHHHHHHHHHH----------CCCCEEEEe
Q psy10463 196 FLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEI-LLVDDASTREFLKSSLDEYVAK----------LSVPTRVIR 264 (605)
Q Consensus 196 ~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eI-IvVDd~S~d~~~~~~l~~~~~~----------~~~~v~~i~ 264 (605)
..+.|-|+.|..|.+ +.+.+-+..|.+.++|.....+ .+|.|.+..+.+.+.+++..++ +. .|.+++
T Consensus 23 ~~e~VLILtplrna~-~~l~~y~~~L~~L~YP~~lIsLgfLv~d~~e~d~t~~~l~~~~~~~q~~~~~~~~F~-~itIl~ 100 (269)
T PF03452_consen 23 NKESVLILTPLRNAA-SFLPDYFDNLLSLTYPHELISLGFLVSDSSEFDNTLKILEAALKKLQSHGPESKRFR-SITILR 100 (269)
T ss_pred cCCeEEEEEecCCch-HHHHHHHHHHHhCCCCchheEEEEEcCCCchhHHHHHHHHHHHHHHhccCcccCCcc-eEEEEc
Confidence 467899999999999 9999999999999999877787 4555555333444455544433 22 677776
Q ss_pred CCCC--------------------CChHHHHHHHHhhc---cCCEEEEecCCccc-CcChHHHHHHHHHcCCcEEEeeeE
Q psy10463 265 SPGR--------------------VGLIKARLLGARQA---EGEILVFLDAHCEC-TLGWLENLVARVAEDRTRVVCPVI 320 (605)
Q Consensus 265 ~~~n--------------------~G~~~arN~G~~~A---~gd~i~flD~D~~~-~~~~L~~ll~~~~~~~~~vv~p~i 320 (605)
.+-. .-+++|||.-+..| ..+|++++|+|++- +|+.|+.| ......++.|.+
T Consensus 101 ~df~~~~~~~~~~RH~~~~Q~~RR~~mAraRN~LL~~aL~p~~swVlWlDaDIv~~P~~lI~dl----i~~~kdIivPn~ 176 (269)
T PF03452_consen 101 KDFGQQLSQDRSERHAFEVQRPRRRAMARARNFLLSSALGPWHSWVLWLDADIVETPPTLIQDL----IAHDKDIIVPNC 176 (269)
T ss_pred CCCcccccCchhhccchhhHHHHHHHHHHHHHHHHHhhcCCcccEEEEEecCcccCChHHHHHH----HhCCCCEEccce
Confidence 5431 11577888877776 45899999999985 45554444 456677777776
No 147
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=96.92 E-value=0.0067 Score=50.74 Aligned_cols=82 Identities=22% Similarity=0.126 Sum_probs=53.8
Q ss_pred echhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCC---h-HHHHHHHHhh-
Q psy10463 207 HNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVG---L-IKARLLGARQ- 281 (605)
Q Consensus 207 ~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G---~-~~arN~G~~~- 281 (605)
+|++ ..|.+.|...++.-. ..|+|+||+|+|++.. .++ +++ .++++....... . ...++.-++.
T Consensus 1 rne~-~~L~~wl~~~~~lG~----d~i~i~d~~s~D~t~~-~l~----~~~-~v~i~~~~~~~~~~~~~~~~~~~~~~~~ 69 (97)
T PF13704_consen 1 RNEA-DYLPEWLAHHLALGV----DHIYIYDDGSTDGTRE-ILR----ALP-GVGIIRWVDPYRDERRQRAWRNALIERA 69 (97)
T ss_pred CChH-HHHHHHHHHHHHcCC----CEEEEEECCCCccHHH-HHH----hCC-CcEEEEeCCCccchHHHHHHHHHHHHhC
Confidence 4777 888899988865432 4799999999998533 444 444 577776554332 1 1223333333
Q ss_pred ccCCEEEEecCCcccCcC
Q psy10463 282 AEGEILVFLDAHCECTLG 299 (605)
Q Consensus 282 A~gd~i~flD~D~~~~~~ 299 (605)
..+++++++|+|-.+.+.
T Consensus 70 ~~~dWvl~~D~DEfl~~~ 87 (97)
T PF13704_consen 70 FDADWVLFLDADEFLVPP 87 (97)
T ss_pred CCCCEEEEEeeeEEEecC
Confidence 478999999999876433
No 148
>PLN02189 cellulose synthase
Probab=96.90 E-value=0.015 Score=67.01 Aligned_cols=202 Identities=10% Similarity=0.046 Sum_probs=118.9
Q ss_pred CCCcEEEEEEeecC---chHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHH--HHHhcCCCeEEeecCCCcc
Q psy10463 88 FLPKSSIVIVFHNE---AWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDE--YVAKLSVPTRVIRSPGRVG 162 (605)
Q Consensus 88 ~~p~~Siiip~yN~---~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~--~~~~~~~~v~~~~~~~~~G 162 (605)
.+|.|.|.|+|-+. ..-....|+-||++-.||....-+-|-|||.+.-|..+..+. +++..=|=.|-..-+.|.-
T Consensus 329 ~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~~WvPFCkK~~IepRaP 408 (1040)
T PLN02189 329 MLSPVDIFVSTVDPLKEPPLVTANTVLSILAMDYPVDKISCYVSDDGASMLTFEALSETAEFARKWVPFCKKFSIEPRAP 408 (1040)
T ss_pred cCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCCH
Confidence 49999999999754 446778899999999999877789999999999997665443 2222211111111111110
Q ss_pred hHHHHHHHhhhccCceEEEecC-ccccccccccccCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCC
Q psy10463 163 LIKARLLGARQAEGEILVFLDA-HCECTLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDAST 241 (605)
Q Consensus 163 ~~~a~n~g~~~a~g~~i~~lD~-d~~~~~~~~~~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~ 241 (605)
.+- ... +.++. -|. ..+...+|.. . .+..+.++..|+++.++.... ..|--+.+||+.
T Consensus 409 e~Y---Fs~---~~~~~--~~~~~~~F~~e~~~-----------~-K~eYEe~kvRI~~l~a~~~~~-p~~~~~m~dGt~ 467 (1040)
T PLN02189 409 EFY---FSL---KVDYL--KDKVQPTFVKERRA-----------M-KREYEEFKVRINAIVAKAQKV-PPEGWIMQDGTP 467 (1040)
T ss_pred HHH---hcc---CCCcc--cccCCchHHHHHHH-----------H-HHHHHHHHHHHHHHHhhcCcc-CCccceeccCcc
Confidence 000 000 00000 000 0000001100 0 011256777777776433211 135566788872
Q ss_pred --------hHHHHHHHHHH-------HHHCCCCEEEEeCCCCCC-----hHHHHHHHHh----hccCCEEEEecCCcccC
Q psy10463 242 --------REFLKSSLDEY-------VAKLSVPTRVIRSPGRVG-----LIKARLLGAR----QAEGEILVFLDAHCECT 297 (605)
Q Consensus 242 --------d~~~~~~l~~~-------~~~~~~~v~~i~~~~n~G-----~~~arN~G~~----~A~gd~i~flD~D~~~~ 297 (605)
.+.+.+++.+- -..+| .+.||..+++.| .++|+|..++ .+.|+||+.||+|..++
T Consensus 468 W~g~~~~dHp~IiQVll~~~~~~d~~g~~lP-~LVYVSREKrPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmY~N 546 (1040)
T PLN02189 468 WPGNNTRDHPGMIQVFLGHSGGHDTEGNELP-RLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYIN 546 (1040)
T ss_pred CCCCCCCCCHHHHHHHhcCCCCccccccccc-eeEEEeccCCCCCCcccchhhHHHHHHHhhhccCCCeEEEccCccccC
Confidence 23333333220 11244 688898888888 5899999984 45899999999999985
Q ss_pred -cChHHHHHHHHHcC
Q psy10463 298 -LGWLENLVARVAED 311 (605)
Q Consensus 298 -~~~L~~ll~~~~~~ 311 (605)
+..|.+.+-.+.+.
T Consensus 547 ns~alr~AMCfflDp 561 (1040)
T PLN02189 547 NSKAVREAMCFLMDP 561 (1040)
T ss_pred chHHHHHhhhhhcCC
Confidence 69999999988764
No 149
>PF14200 RicinB_lectin_2: Ricin-type beta-trefoil lectin domain-like; PDB: 2X2S_C 2X2T_A 2VSE_B 2VSA_A 3EF2_A 2IHO_A 3HZB_H 1YBI_B 3PHZ_A 3NBE_A ....
Probab=96.85 E-value=0.0014 Score=55.88 Aligned_cols=51 Identities=18% Similarity=0.306 Sum_probs=40.9
Q ss_pred cceEEEEecC---Ccee--e-cCCCeeeecCCCCCCCCCceEEEeCCCCCCcceEeC
Q psy10463 553 LTQMFVMKLP---TDLI--A-TDESVCLDVPEYENDISPRVRILACSGFNRQRWTYD 603 (605)
Q Consensus 553 ~nQ~w~~~~~---~g~i--~-~~~~~CLd~~~~~~~~g~~v~l~~C~~~~~Q~W~~~ 603 (605)
.||+|+++.. .|.. + ..+++||++.+....+|+.|.+++|++..+|+|.+.
T Consensus 1 ~nQ~W~~~~~~~~~g~Y~i~n~~sg~~L~v~~~~~~~g~~v~~~~~~~~~~Q~W~i~ 57 (105)
T PF14200_consen 1 DNQQWTFTPVGDSDGYYKIRNVNSGKYLDVAGGSTANGTNVQQWTCNGNDNQQWKIE 57 (105)
T ss_dssp CGGEEEEEEEETTTTEEEEEETTTTEEEEEGCTTCSTTEBEEEEESSSSGGGEEEEE
T ss_pred CCCEEEEEEecCCCCEEEEEECCCCCEEEeCCCCcCCCcEEEEecCCCCcCcEEEEE
Confidence 3799998731 3443 3 357899999988888899999999999779999975
No 150
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=96.85 E-value=0.0089 Score=61.66 Aligned_cols=156 Identities=16% Similarity=0.228 Sum_probs=91.8
Q ss_pred CChHHHHHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHc----CCcEEEeeeEeeecCCeeEEeccc--c-cceeee
Q psy10463 269 VGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAE----DRTRVVCPVIDIISDVTFAYVRSF--E-LHWGAF 341 (605)
Q Consensus 269 ~G~~~arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~----~~~~vv~p~i~~i~~~~~~~~~~~--~-~~~g~~ 341 (605)
.-.-..||.|...|+.++++.+|.|..+.++.-+.+.+.+.. .....|.|..+.-....+-..... . ...|..
T Consensus 113 YPiN~LRNvAr~~a~T~~v~~~DvD~~ps~~l~~~l~~~~~~~~~~~~~a~VvPaFE~~~~~~~P~~K~eL~~~~~~~~~ 192 (317)
T PF13896_consen 113 YPINLLRNVARSGARTDYVFLLDVDFLPSPGLYEKLLRFARRNIDKSKTAFVVPAFETREGADIPRTKKELLELLKNGKA 192 (317)
T ss_pred CChHHHHHHHHHhcCcceEEEecceeeeCcchHHHHHHHhhhhccCCceEEEEeeeecccCcCCCCCHHHHHHHHHhCch
Confidence 345678999999999999999999999999988888777654 344778888754333221100000 0 000100
Q ss_pred eccceeeEeecCc--hhHhhhcc-----CCCCccccccccce--EEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHc
Q psy10463 342 NWELHFRWYTYGS--SDAIIKRK-----DFTEPFKTPAMAGG--LFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQC 412 (605)
Q Consensus 342 ~~~l~~~~~~~~~--~~~~~~~~-----~~~~~~~~~~~~G~--~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~ 412 (605)
..++.+....+. .....-.. ....++.+..-.+- .+..+| ..-.|||.|..+|..-.-...-+...
T Consensus 193 -~~Fh~~~~~~~h~~t~~~~W~~~~~~~~~~~~y~v~~~~~~EP~~I~~~----~~P~yDErF~~yg~nk~s~~~eL~~~ 267 (317)
T PF13896_consen 193 -RPFHHKVCPQGHGPTNYDRWFSAPESDELDVPYEVKYEDGWEPYYIGRR----NVPLYDERFRGYGFNKISQIYELCAA 267 (317)
T ss_pred -hhccccccccCcCCccHHHHhccCCcCCCcceEEEccCCCccCEEEccC----CCCCCcccccccccchHHHHHHHHHc
Confidence 000000000000 00000000 00111222111111 233343 46789999999999999999999999
Q ss_pred CCeEEEecceEEEEEcc
Q psy10463 413 GGSIEIAPCSHVAHLFR 429 (605)
Q Consensus 413 G~~i~~~p~s~v~H~~r 429 (605)
|+++.++|.+.+.|...
T Consensus 268 gy~F~VL~~aFlVH~~h 284 (317)
T PF13896_consen 268 GYRFHVLPNAFLVHRPH 284 (317)
T ss_pred CCEEEEcCCeeEEecCC
Confidence 99999999999999843
No 151
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=96.71 E-value=0.084 Score=61.33 Aligned_cols=203 Identities=11% Similarity=0.051 Sum_probs=119.3
Q ss_pred CCCCcEEEEEEeecC---chHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHH--HHHhcCCCeEEeecCCCc
Q psy10463 87 EFLPKSSIVIVFHNE---AWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDE--YVAKLSVPTRVIRSPGRV 161 (605)
Q Consensus 87 ~~~p~~Siiip~yN~---~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~--~~~~~~~~v~~~~~~~~~ 161 (605)
.++|.|.|.|+|-+. ..-....|+-||++-.||....-+-|-|||.+.-|..+..+. +++..=|=.|-...+.|.
T Consensus 346 s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~~WvPFCkK~~IepRa 425 (1079)
T PLN02638 346 SQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPRA 425 (1079)
T ss_pred ccCCCccEEEeCCCCccCccHHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCC
Confidence 359999999999754 446778899999999999877789999999999997665443 222221111111111111
Q ss_pred chHHHHHHHhhhccCceEEEecC-ccccccccccccCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCC
Q psy10463 162 GLIKARLLGARQAEGEILVFLDA-HCECTLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDAS 240 (605)
Q Consensus 162 G~~~a~n~g~~~a~g~~i~~lD~-d~~~~~~~~~~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S 240 (605)
-.+ -... +.++. -|. ..+...+|.. . .+..+.++..|+++.++.... ..|--+.+||+
T Consensus 426 Pe~---YFs~---~~~~~--~~~~~~~F~~e~~~-----------m-K~eYEe~k~RIe~l~a~~~~~-p~~~~~m~dgt 484 (1079)
T PLN02638 426 PEW---YFAQ---KIDYL--KDKVQPSFVKDRRA-----------M-KREYEEFKVRINGLVAKAQKV-PEEGWIMQDGT 484 (1079)
T ss_pred HHH---Hhcc---CCCcc--cccCCchHHHHHHH-----------H-HHHHHHHHHHHHHHHhhcccc-CCccccccCCc
Confidence 000 0000 00000 000 0000001100 0 112266778888877433111 12445567787
Q ss_pred C--------hHHHHHHHHHH-------HHHCCCCEEEEeCCCCCC-----hHHHHHHHHhh----ccCCEEEEecCCccc
Q psy10463 241 T--------REFLKSSLDEY-------VAKLSVPTRVIRSPGRVG-----LIKARLLGARQ----AEGEILVFLDAHCEC 296 (605)
Q Consensus 241 ~--------d~~~~~~l~~~-------~~~~~~~v~~i~~~~n~G-----~~~arN~G~~~----A~gd~i~flD~D~~~ 296 (605)
. .+++.+++.+- -..+| .+.|+..+++.| .++|+|..++. +.|+||+.||+|..+
T Consensus 485 ~W~g~~~~dHp~IiqVll~~~~~~d~~g~~lP-~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmYi 563 (1079)
T PLN02638 485 PWPGNNTRDHPGMIQVFLGHSGGLDTEGNELP-RLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYI 563 (1079)
T ss_pred cCCCCCCCCCHHHHHHHhcCCCcccccccccc-ceEEEecccCCCCCcccccchHHHHHHHhhhccCCCeEeecccCccc
Confidence 1 23333333210 01345 678888888888 58999999844 489999999999987
Q ss_pred C-cChHHHHHHHHHcC
Q psy10463 297 T-LGWLENLVARVAED 311 (605)
Q Consensus 297 ~-~~~L~~ll~~~~~~ 311 (605)
+ |..|.+.+-.+.+.
T Consensus 564 Nns~alr~AMCf~lDp 579 (1079)
T PLN02638 564 NNSKALREAMCFLMDP 579 (1079)
T ss_pred CchHHHHHhhhhhcCc
Confidence 5 99999999988754
No 152
>PLN02195 cellulose synthase A
Probab=96.54 E-value=0.028 Score=64.55 Aligned_cols=203 Identities=10% Similarity=0.027 Sum_probs=111.4
Q ss_pred CCCCcEEEEEEeecC---chHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHH--HHHhcCCCeEEeecCCCc
Q psy10463 87 EFLPKSSIVIVFHNE---AWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDE--YVAKLSVPTRVIRSPGRV 161 (605)
Q Consensus 87 ~~~p~~Siiip~yN~---~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~--~~~~~~~~v~~~~~~~~~ 161 (605)
.++|.|.|.|+|-+. ..-....|+-||++-.||....-+-|-|||.+.-|.....+. +++.-=|=.|-..-+.|.
T Consensus 249 s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~~WvPFCkK~~IepRa 328 (977)
T PLN02195 249 SQLAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLVETAEFARKWVPFCKKYSIEPRA 328 (977)
T ss_pred ccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCC
Confidence 459999999999754 446677899999999999877789999999999997665443 222211111111111111
Q ss_pred chHHHHHHHhhhccCceEEEecC-ccccccccccccCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCC
Q psy10463 162 GLIKARLLGARQAEGEILVFLDA-HCECTLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDAS 240 (605)
Q Consensus 162 G~~~a~n~g~~~a~g~~i~~lD~-d~~~~~~~~~~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S 240 (605)
-.+- ... +.++. -|. ..+...+|..- .+..+.++..|+++.+..... ..|.-...||+
T Consensus 329 Pe~Y---Fs~---~~~~~--~~~~~~~F~~e~~~~------------K~eYEe~k~RIe~~~~~~~~~-~~~~~~m~d~t 387 (977)
T PLN02195 329 PEFY---FSQ---KIDYL--KDKVQPSFVKERRAM------------KRDYEEYKVRVNALVAKAQKT-PEEGWTMQDGT 387 (977)
T ss_pred HHHH---hcc---CCCcc--cCCCCchhHHHHHHH------------HHHHHHHHHHHHHHHhhcccC-CcccccccCCc
Confidence 0000 000 00000 000 00000011000 011255666666665431100 01222223333
Q ss_pred --------ChHHHHHHHHH-------HHHHCCCCEEEEeCCCCCC-----hHHHHHHHHhh----ccCCEEEEecCCccc
Q psy10463 241 --------TREFLKSSLDE-------YVAKLSVPTRVIRSPGRVG-----LIKARLLGARQ----AEGEILVFLDAHCEC 296 (605)
Q Consensus 241 --------~d~~~~~~l~~-------~~~~~~~~v~~i~~~~n~G-----~~~arN~G~~~----A~gd~i~flD~D~~~ 296 (605)
+.+.+-+++-. --..+| .+.||..+++.| .++|+|.+++. +.|+||+.||+|..+
T Consensus 388 ~W~g~~~~dHp~IIqVll~~~~~~d~~g~~lP-~LVYVSREKrPg~~Hh~KAGamNallrvSavmTNap~il~lDcDmy~ 466 (977)
T PLN02195 388 PWPGNNTRDHPGMIQVFLGETGARDIEGNELP-RLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYV 466 (977)
T ss_pred cCCCCCCCCCcchhhhhccCCCCcccccccCc-eeEEEeccCCCCCCcccccchhHHHHHHhhhccCCCeEEEecCcccc
Confidence 11111111100 011356 788888888888 48889999875 469999999999987
Q ss_pred Cc-ChHHHHHHHHHcC
Q psy10463 297 TL-GWLENLVARVAED 311 (605)
Q Consensus 297 ~~-~~L~~ll~~~~~~ 311 (605)
++ ++|.+.+-.+.+.
T Consensus 467 n~s~~lr~AMCf~~D~ 482 (977)
T PLN02195 467 NNSKAVREAMCFLMDP 482 (977)
T ss_pred CcHHHHHHHHhhccCc
Confidence 55 7999999888764
No 153
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=96.52 E-value=0.013 Score=48.88 Aligned_cols=79 Identities=23% Similarity=0.142 Sum_probs=51.8
Q ss_pred ecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcc---hH-HHHHHHhhh-
Q psy10463 99 HNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVG---LI-KARLLGARQ- 173 (605)
Q Consensus 99 yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G---~~-~a~n~g~~~- 173 (605)
+||+ ..|.+.|..-+.... ..++|+||||+|+|.+ ++.+ . +.++++....... .. ..++.-.+.
T Consensus 1 rne~-~~L~~wl~~~~~lG~----d~i~i~d~~s~D~t~~-~l~~----~-~~v~i~~~~~~~~~~~~~~~~~~~~~~~~ 69 (97)
T PF13704_consen 1 RNEA-DYLPEWLAHHLALGV----DHIYIYDDGSTDGTRE-ILRA----L-PGVGIIRWVDPYRDERRQRAWRNALIERA 69 (97)
T ss_pred CChH-HHHHHHHHHHHHcCC----CEEEEEECCCCccHHH-HHHh----C-CCcEEEEeCCCccchHHHHHHHHHHHHhC
Confidence 4777 889999998876642 4799999999999833 3333 3 3366655443221 11 223333333
Q ss_pred ccCceEEEecCcccc
Q psy10463 174 AEGEILVFLDAHCEC 188 (605)
Q Consensus 174 a~g~~i~~lD~d~~~ 188 (605)
..++|++++|+|.-.
T Consensus 70 ~~~dWvl~~D~DEfl 84 (97)
T PF13704_consen 70 FDADWVLFLDADEFL 84 (97)
T ss_pred CCCCEEEEEeeeEEE
Confidence 478999999999844
No 154
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=96.35 E-value=0.017 Score=56.14 Aligned_cols=68 Identities=19% Similarity=0.208 Sum_probs=46.4
Q ss_pred EEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHh
Q psy10463 92 SSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGA 171 (605)
Q Consensus 92 ~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~ 171 (605)
|||||++-|+ ..+.+|++++.++..++ .|+|-||+ .....+++.|.|.|+
T Consensus 1 isiI~c~n~~--~~~~~~~~~i~~~~~~~--~~~i~i~~--------------------------~~~~~s~~~~yN~a~ 50 (217)
T PF13712_consen 1 ISIIICVNDE--ELYEECLRSIKRLIGPP--GELIEIDN--------------------------VRNAKSMAAAYNEAM 50 (217)
T ss_dssp EEEEEEES-H--HHHHHHHHHHHHTT--T--EEEEEEE---------------------------SSS-S-TTTHHHHHG
T ss_pred CEEEEEECCH--HHHHHHHHHHHhhCCCC--ceEEEEec--------------------------cCCCcCHHHHHHHHH
Confidence 5777766555 68889999999887665 46555554 223367888999999
Q ss_pred hhccCceEEEecCccccc
Q psy10463 172 RQAEGEILVFLDAHCECT 189 (605)
Q Consensus 172 ~~a~g~~i~~lD~d~~~~ 189 (605)
+.|+++|++|+..|....
T Consensus 51 ~~a~~~ylvflHqDv~i~ 68 (217)
T PF13712_consen 51 EKAKAKYLVFLHQDVFII 68 (217)
T ss_dssp GG--SSEEEEEETTEE-S
T ss_pred HhCCCCEEEEEeCCeEEc
Confidence 999999999999998764
No 155
>KOG3917|consensus
Probab=96.30 E-value=0.014 Score=54.88 Aligned_cols=45 Identities=18% Similarity=0.405 Sum_probs=41.7
Q ss_pred cccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeE
Q psy10463 372 AMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSI 416 (605)
Q Consensus 372 ~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i 416 (605)
.+.||.++++++-|.++.|....+-+||.||-||.+|+..+|..+
T Consensus 180 ~fvGGILll~~~hyk~~NGMSN~yWGWGlEDDEFy~RI~dagLql 224 (310)
T KOG3917|consen 180 KFVGGILLLTLKHYKKLNGMSNKYWGWGLEDDEFYLRIIDAGLQL 224 (310)
T ss_pred hhcceeEEeeHHHHHHhcCccccccccCcccchhhheeccccceE
Confidence 578999999999999999999999999999999999999999654
No 156
>PF11735 CAP59_mtransfer: Cryptococcal mannosyltransferase 1 ; InterPro: IPR021047 The capsule of pathogenic fungi is a complex polysaccharide whose formation is determined by a number of enzymes including, most importantly, alpha-1,3-mannosyltransferase 1 [, ]. It is responsible for addition of mannose residues in an alpha-1,3 linkage to a polymannosly precursor.
Probab=96.21 E-value=0.11 Score=51.01 Aligned_cols=202 Identities=16% Similarity=0.125 Sum_probs=103.9
Q ss_pred EEEeechhhHHHHHHHH----HHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHH---HHCCCCEEEEeCCCCC------
Q psy10463 203 VIVFHNEAWSALLRTVH----SVISRSPRSMLKEILLVDDASTREFLKSSLDEYV---AKLSVPTRVIRSPGRV------ 269 (605)
Q Consensus 203 IIp~~n~~~~~l~~~l~----sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~---~~~~~~v~~i~~~~n~------ 269 (605)
..-.||.+ +.|..... .+++.-.+.. .=|-|++++|.|. +++.|+.+. ...+.+-.++..+...
T Consensus 5 A~~l~~~~-~iL~~~~~~~ll~li~~LGp~n-v~vSIyE~~S~D~-T~~~L~~L~~~L~~lgv~~~i~~~~~~~~~~~~~ 81 (241)
T PF11735_consen 5 AANLYNNE-DILPSLWGDALLELIRFLGPEN-VFVSIYESGSWDG-TKEALRALDAELDALGVPHSIVLSDITHRDEIER 81 (241)
T ss_pred EEEcccCH-hHHHHHHHHHHHHHHHHhCcCe-EEEEEEeCCCCcc-HHHHHHHHHHHHHhCCCCeEEEeCCCcccccccc
Confidence 33456655 45543333 3444434432 5777899999997 455676665 5555444554422211
Q ss_pred --------ChHHHHHHHHhhc---------cCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEec
Q psy10463 270 --------GLIKARLLGARQA---------EGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVR 332 (605)
Q Consensus 270 --------G~~~arN~G~~~A---------~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~ 332 (605)
-++.-||.+++-- .-+-|+||| |+.+.+.-+-+|+..-......++|. +|.+.+..|.-.-
T Consensus 82 ~~~~~RI~~LA~lRN~ALePL~~~~~~~~~~fd~VlfLN-DV~f~~~Dil~LL~~~~~~~~~~aCa-mDf~~~~~fYD~w 159 (241)
T PF11735_consen 82 PPRLRRIEYLAELRNRALEPLYDLARKRGRRFDKVLFLN-DVFFCPEDILELLFTRNRGNYDMACA-MDFINPPKFYDTW 159 (241)
T ss_pred cchhhhHHHHHHHHhHHHHHHHhhhhccCCCcCEEEEec-CcccCHHHHHHHHhhcCcccccchhh-cccccCcccccee
Confidence 1367899987432 235799999 77776654445544443333455554 4544333331000
Q ss_pred c-cccceeeeeccceeeEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhC--CCCc--ccccccchhhHHHH
Q psy10463 333 S-FELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIG--AYDE--EMQVWGGENLEMSF 407 (605)
Q Consensus 333 ~-~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iG--gfDe--~~~~~g~ED~dl~~ 407 (605)
. .+. .|... ....++...............|+++.+..+|..+++.+.|..-+ .|.- .....+.|..=++.
T Consensus 160 v~RD~-~G~~~---~~~~~p~f~~~~~~~~~~~~~pv~V~SCWnG~va~~a~pf~~~~~lrFR~~~~~~~~~sEc~Li~~ 235 (241)
T PF11735_consen 160 VLRDI-EGDSF---GSPFWPYFRSASSRDRLRRGDPVPVFSCWNGMVAFDAEPFLPPTPLRFRADSEGECEASECCLIHA 235 (241)
T ss_pred EEecC-CCCcc---ccccCcCcCCHHHHHHHhcCCCeeeecccCCcccccchhhccCCceeecCCCCCceeccchhHhHh
Confidence 0 000 11110 01111111111222233456788888899999999999998765 2322 11122345554554
Q ss_pred HHHHcC
Q psy10463 408 RVWQCG 413 (605)
Q Consensus 408 Rl~~~G 413 (605)
-+|..|
T Consensus 236 D~~~~g 241 (241)
T PF11735_consen 236 DLWRWG 241 (241)
T ss_pred hhhhcC
Confidence 444433
No 157
>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus (Rhodothermus obamensis), this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.; GO: 0050504 mannosyl-3-phosphoglycerate synthase activity, 0051479 mannosylglycerate biosynthetic process, 0005737 cytoplasm; PDB: 2WVM_A 2WVL_A 2WVK_A 2ZU7_B 2ZU9_B 2ZU8_A.
Probab=95.99 E-value=0.098 Score=53.26 Aligned_cols=107 Identities=22% Similarity=0.279 Sum_probs=62.8
Q ss_pred CCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCC---hHHH--HHHHHHHHHHCCCCEEEEeCCC----
Q psy10463 197 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDAST---REFL--KSSLDEYVAKLSVPTRVIRSPG---- 267 (605)
Q Consensus 197 ~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~---d~~~--~~~l~~~~~~~~~~v~~i~~~~---- 267 (605)
+-...||||+.||.. ..|+.++.--|.. +-||||-|.+. |... .+.++.+......++-++++..
T Consensus 49 l~~maIVVP~KnE~l----~lleGVL~gIPh~--C~IIvVSNS~r~~~d~f~~E~d~l~~f~~~t~r~~~~vHQkDp~lA 122 (381)
T PF09488_consen 49 LSKMAIVVPCKNEKL----KLLEGVLSGIPHD--CLIIVVSNSSREPVDRFKMEVDLLKHFCRLTRRQIIIVHQKDPGLA 122 (381)
T ss_dssp HTTEEEEEEESS--H----HHHHHHHHCS-TT--SEEEEEE---CSSSCHHHHHHHHHHHHHHHCT--EEEEETT-HHHH
T ss_pred HhCcEEEEECCCCch----hhhhhhhhcCCCC--CeEEEEECCCCCCccHHHHHHHHHHHHHHhhcCceEEEecCCHHHH
Confidence 567899999999993 4455566655655 78999988877 4332 2356666665443566776653
Q ss_pred ------------------CCChHHHHHHHHhhc---cCCEEEEecCCcccCcChHHHHHHHHHc
Q psy10463 268 ------------------RVGLIKARLLGARQA---EGEILVFLDAHCECTLGWLENLVARVAE 310 (605)
Q Consensus 268 ------------------n~G~~~arN~G~~~A---~gd~i~flD~D~~~~~~~L~~ll~~~~~ 310 (605)
+.|.+.++-.|+..| .-+||-|+|+|..+ |+.+.+.+..+..
T Consensus 123 ~Af~~aGy~~il~~~g~VR~GKgEGMiiGillAk~~g~~YVGFvDADNyi-PGaV~EYvk~yAA 185 (381)
T PF09488_consen 123 EAFKEAGYPEILDEDGLVRNGKGEGMIIGILLAKAPGKRYVGFVDADNYI-PGAVNEYVKDYAA 185 (381)
T ss_dssp HHHHHTT--TTB-TTSSB-SSHHHHHHHHHHHHHHTT-SEEEE--TTBS--HHHHHHHHHHHHH
T ss_pred HHHHHcCcHHHhCCCCceecCchHHHHHHHHHHHhcCCceEeEeeccCCC-cchHHHHHHHHHh
Confidence 456777777786555 46999999999877 5555555555433
No 158
>KOG2547|consensus
Probab=95.94 E-value=0.05 Score=55.43 Aligned_cols=100 Identities=17% Similarity=0.204 Sum_probs=82.8
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCC-CeEEeecCCCcchHH
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSV-PTRVIRSPGRVGLIK 165 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~-~v~~~~~~~~~G~~~ 165 (605)
..+|.||||.|-.--. +.+..-++|.....|+. +|++.+-+-+.|+.++ ..++.+++++. ..+++.-.+.-|...
T Consensus 82 ~~LPgVSiikPl~G~d-~nl~~Nlesffts~Y~~--~ElLfcv~s~eDpAi~-vv~~Ll~kyp~VdAklf~gG~~vg~np 157 (431)
T KOG2547|consen 82 PKLPGVSIIKPLKGVD-PNLYHNLESFFTSQYHK--YELLFCVESSEDPAIE-VVERLLKKYPNVDAKLFFGGEKVGLNP 157 (431)
T ss_pred CCCCCceEEeecccCC-chhHHhHHHHHhhccCc--eEEEEEEccCCCcHHH-HHHHHHhhCCCcceEEEEcccccccCh
Confidence 3599999999999998 99999999999999986 8999999999998754 46777777762 257888888788765
Q ss_pred HHH---HHhhhccCceEEEecCcccccc
Q psy10463 166 ARL---LGARQAEGEILVFLDAHCECTL 190 (605)
Q Consensus 166 a~n---~g~~~a~g~~i~~lD~d~~~~~ 190 (605)
-.| -|.+.|+.++++++|++....+
T Consensus 158 KInN~mpgy~~a~ydlvlisDsgI~m~p 185 (431)
T KOG2547|consen 158 KINNMMPGYRAAKYDLVLISDSGIFMKP 185 (431)
T ss_pred hhhccCHHHHHhcCCEEEEecCCeeecC
Confidence 544 4999999999999999986653
No 159
>PF11316 Rhamno_transf: Putative rhamnosyl transferase ; InterPro: IPR021466 This bacterial family of proteins has no known function.
Probab=95.42 E-value=0.11 Score=50.93 Aligned_cols=90 Identities=14% Similarity=0.128 Sum_probs=63.5
Q ss_pred HHHHHHHHhcCCCCCceeEEEe-eCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhh---ccCCEE--E
Q psy10463 215 LRTVHSVISRSPRSMLKEILLV-DDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQ---AEGEIL--V 288 (605)
Q Consensus 215 ~~~l~sl~~q~~~~~~~eIIvV-Dd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~---A~gd~i--~ 288 (605)
.-||.|+.+||.++ +..||+ |+.... ..++.|+++.+.+| .++++..+... ...+....++. ..++++ +
T Consensus 45 ~~~LpSl~~QTd~d--F~~lv~~~~~~P~-~~~~rL~~l~~~~p-~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 119 (234)
T PF11316_consen 45 TYCLPSLRAQTDQD--FTWLVLFDDDLPE-PYRERLRDLLADYP-QFRIVFRPPGP-HRDAMRRAINAARRDGADPVLQF 119 (234)
T ss_pred HHHhhHHHhccCCC--eEEEEEECCCCCH-HHHHHHHHHhccCC-CcEEEecCCch-HHHHHHHHHhhhccCCCCEEEEE
Confidence 35899999999887 677665 555554 46667888888888 78877665522 34444444322 244543 4
Q ss_pred EecCCcccCcChHHHHHHHHH
Q psy10463 289 FLDAHCECTLGWLENLVARVA 309 (605)
Q Consensus 289 flD~D~~~~~~~L~~ll~~~~ 309 (605)
-||+|+.+..++++.+-+...
T Consensus 120 RLDdDDAl~~dFV~rlr~~a~ 140 (234)
T PF11316_consen 120 RLDDDDALHRDFVARLRRAAA 140 (234)
T ss_pred EECCcchhhHHHHHHHHHHHH
Confidence 479999999999999999874
No 160
>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase. This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.
Probab=95.08 E-value=0.34 Score=49.18 Aligned_cols=108 Identities=24% Similarity=0.291 Sum_probs=67.9
Q ss_pred CCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCC---hHHH--HHHHHHHHHHCCCCEEEEeCCC----
Q psy10463 197 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDAST---REFL--KSSLDEYVAKLSVPTRVIRSPG---- 267 (605)
Q Consensus 197 ~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~---d~~~--~~~l~~~~~~~~~~v~~i~~~~---- 267 (605)
+-...||||+.||.. ..|+.++.--|.. +-||||-|.+. |... .+.+..+..-...++-++++..
T Consensus 49 ~~~maIVVP~KdE~l----~lleGVL~gIPh~--c~iIvVSNS~r~~~d~f~~E~d~~~~f~~~t~r~~i~vHQkDp~la 122 (381)
T TIGR02460 49 LGKTAIVVPVKNEKL----HLLEGVLSGIPHE--CPIIIVSNSKREPPDRFKMEVDLIRHFSNLTHRKIIIIHQKDPALA 122 (381)
T ss_pred HhCcEEEEEcCCCch----hHHhhHhhcCCCC--CeEEEEeCCCCCChhHHHHHHHHHHHHHHhhcCceEEEEcCCHHHH
Confidence 456889999999993 3445555555555 68888987754 3211 1244455443322455555442
Q ss_pred ------------------CCChHHHHHHHHhhc---cCCEEEEecCCcccCcChHHHHHHHHHcC
Q psy10463 268 ------------------RVGLIKARLLGARQA---EGEILVFLDAHCECTLGWLENLVARVAED 311 (605)
Q Consensus 268 ------------------n~G~~~arN~G~~~A---~gd~i~flD~D~~~~~~~L~~ll~~~~~~ 311 (605)
+.|.+.++-.|+..| ..+||-|+|+|..+ |+...+.+..+..+
T Consensus 123 ~Af~~~gy~~il~~~g~VR~GKgEGMiiG~lLAk~~g~~YVGFiDaDNyi-PGaV~EYvk~yAaG 186 (381)
T TIGR02460 123 EAFKEVGYTSILGENGRVRSGKGEGMLLGLLLAKAIGAEYVGFVDADNYF-PGAVNEYVKIYAAG 186 (381)
T ss_pred HHHHHcCchhhhCCCCceecCcchHHHHHHHHHHHhCCceEeEeecccCC-CchHHHHHHHHHhh
Confidence 345666666776554 46999999999987 56666666655543
No 161
>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional
Probab=95.03 E-value=0.33 Score=49.51 Aligned_cols=108 Identities=19% Similarity=0.278 Sum_probs=67.4
Q ss_pred CCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCC---hHHH--HHHHHHHHHHCCCCEEEEeCCC----
Q psy10463 197 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDAST---REFL--KSSLDEYVAKLSVPTRVIRSPG---- 267 (605)
Q Consensus 197 ~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~---d~~~--~~~l~~~~~~~~~~v~~i~~~~---- 267 (605)
+-...||||+.||.. ..|+.++.--|.. +-||||-|.+. |... .+.+..+..-...++-++++..
T Consensus 50 ~~~mAIVVP~KdE~l----~lleGVL~gIPh~--c~iIvVSNS~r~~~d~f~~E~dlv~~f~~~t~r~~i~vHQkDp~la 123 (393)
T PRK14503 50 LGRMAIVVPVKNERL----KLLEGVLKGIPHE--CPIIVVSNSKREPPDRFKLEVDLVRHFYRLTQRPIIIVHQKDPGLA 123 (393)
T ss_pred HhCcEEEEEcCCCch----hHHhhHhhcCCCC--CeEEEEeCCCCCCchHHHHHHHHHHHHHhhhcCceEEEEcCCHHHH
Confidence 456889999999993 4445555555555 68888887644 3221 1244455443322455555442
Q ss_pred ------------------CCChHHHHHHHHhhc---cCCEEEEecCCcccCcChHHHHHHHHHcC
Q psy10463 268 ------------------RVGLIKARLLGARQA---EGEILVFLDAHCECTLGWLENLVARVAED 311 (605)
Q Consensus 268 ------------------n~G~~~arN~G~~~A---~gd~i~flD~D~~~~~~~L~~ll~~~~~~ 311 (605)
+.|.+.++-.|+..| ..+||-|+|+|..+ |+...+.+..+..+
T Consensus 124 ~Af~~aGyp~il~~~g~VR~GKgEGMiiG~lLAk~~g~~YVGFiDADNyi-PGaV~EYvk~yAAG 187 (393)
T PRK14503 124 EALKEAGYPYILDENGLVRSGKGEGMIIGLLLAKALGARYVGFVDADNYI-PGAVNEYVKIYAAG 187 (393)
T ss_pred HHHHHcCChhhhCCCCceecCcchHHHHHHHHHHHhCCCeEeEeecccCC-CchHHHHHHHHHhh
Confidence 345566666665544 46999999999987 56666666655443
No 162
>PLN02190 cellulose synthase-like protein
Probab=94.92 E-value=0.24 Score=55.76 Aligned_cols=192 Identities=10% Similarity=0.038 Sum_probs=109.0
Q ss_pred CCCCcEEEEEEeec---CchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHH--HHHhcCCCeEEeecCCCc
Q psy10463 87 EFLPKSSIVIVFHN---EAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDE--YVAKLSVPTRVIRSPGRV 161 (605)
Q Consensus 87 ~~~p~~Siiip~yN---~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~--~~~~~~~~v~~~~~~~~~ 161 (605)
+++|.|.|.|+++| |.......|+.|+++-.||....-+-|-|||.+.-|..+..+. +++..=|=.|-..-+.|.
T Consensus 90 ~~Lp~VDvFV~TaDP~kEPpl~v~nTvLSilA~dYP~eklscYvSDDG~s~LT~~al~EAa~FA~~WvPFCrK~~IepRa 169 (756)
T PLN02190 90 HDLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNVRVRA 169 (756)
T ss_pred ccCCcceEEEecCCCCcCCHHHHHHHHHHHHhccCCccccceEEecCCCcHhHHHHHHHHHHHHhhhcccccccCCCcCC
Confidence 35899999999999 8889999999999999999977788999999999997665543 222211111111111111
Q ss_pred chHHHHHHHhhhccCceEEEecCccccccccccccCCcceEEEEeechhhHHHHHHHHHHHh------------------
Q psy10463 162 GLIKARLLGARQAEGEILVFLDAHCECTLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVIS------------------ 223 (605)
Q Consensus 162 G~~~a~n~g~~~a~g~~i~~lD~d~~~~~~~~~~~~p~vSVIIp~~n~~~~~l~~~l~sl~~------------------ 223 (605)
-.+- .... ..+. .+.+...+|..- .++.+.++..++....
T Consensus 170 Pe~Y---F~~~-~~~~------~~~~f~~e~~~~------------K~eYee~k~ri~~a~~~~~~~~~~~~~~~~~~~~ 227 (756)
T PLN02190 170 PFRY---FLNP-PVAT------EDSEFSKDWEMT------------KREYEKLSRKVEDATGDSHWLDAEDDFEAFSNTK 227 (756)
T ss_pred HHHH---hcCC-CCCC------CCchhHHHHHHH------------HHHHHHHHHHHHhhccCCCCcccCCcccccCCCC
Confidence 0000 0000 0000 000110011000 0001222333332211
Q ss_pred -cCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCC-----hHHHHHHHHhh----ccCCEEEEecCC
Q psy10463 224 -RSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVG-----LIKARLLGARQ----AEGEILVFLDAH 293 (605)
Q Consensus 224 -q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G-----~~~arN~G~~~----A~gd~i~flD~D 293 (605)
++.+. ..+|++ |+ +.... --..+| .+.++..+++.| .++|+|.-++. +.+++|+-+|.|
T Consensus 228 ~~dH~~-iiqVll-~~-~~~~~-------~~~~lP-~LVYvSREKrP~~~Hh~KAGAmNaLlRVSavmtNaP~iLnlDCD 296 (756)
T PLN02190 228 PNDHST-IVKVVW-EN-KGGVG-------DEKEVP-HLVYISREKRPNYLHHYKAGAMNFLVRVSGLMTNAPYMLNVDCD 296 (756)
T ss_pred CCCCcc-ceEEEe-cC-CCCcc-------ccccCc-eEEEEeccCCCCCCcccccchhHHHHHHhhhhccCCeEEEecCc
Confidence 11111 134432 33 21110 012466 888999888888 58889987754 489999999999
Q ss_pred ccc-CcChHHHHHHHHHcC
Q psy10463 294 CEC-TLGWLENLVARVAED 311 (605)
Q Consensus 294 ~~~-~~~~L~~ll~~~~~~ 311 (605)
... ++..+.+.+-.+.+.
T Consensus 297 mY~Nns~~~r~AmCf~ld~ 315 (756)
T PLN02190 297 MYANEADVVRQAMCIFLQK 315 (756)
T ss_pred cccCchhHHHHhhhhhcCC
Confidence 987 788888888887643
No 163
>KOG2571|consensus
Probab=94.81 E-value=0.023 Score=64.53 Aligned_cols=139 Identities=11% Similarity=0.029 Sum_probs=77.8
Q ss_pred hHHHHHHHHhhccC--CEEEEecCCcccCcChHHHHHHHHHcCCc-EEEeeeEeeecCCeeEEecccccceeeeecccee
Q psy10463 271 LIKARLLGARQAEG--EILVFLDAHCECTLGWLENLVARVAEDRT-RVVCPVIDIISDVTFAYVRSFELHWGAFNWELHF 347 (605)
Q Consensus 271 ~~~arN~G~~~A~g--d~i~flD~D~~~~~~~L~~ll~~~~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~ 347 (605)
.-...+........ +||+++|+|+.+.|+.+-.|++.++.++. +.+|+.|...-+....... .|.+.+++
T Consensus 426 ~r~~~y~~~~~L~~~v~~il~vD~dT~~~P~ai~~lv~~f~~dp~VggaCG~I~~~~~~w~v~~Q-------~FEY~Ish 498 (862)
T KOG2571|consen 426 HRWVMYTAFKALMPSVDYILVVDADTRLDPDALYHLVKVFDEDPQVGGACGRILNKGGSWVVAYQ-------NFEYAISH 498 (862)
T ss_pred HHHHHHHHHHHhcCcceEEEEecCCCccCcHHHHHHHHHhccCcccceeccccccCCCceEEeHH-------HHHHHHHH
Confidence 33444455554433 47799999999999999999999998765 7788766333222211111 11111100
Q ss_pred eEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHh------------CCCCcccccccchhhHHHHHHHHcCCe
Q psy10463 348 RWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHI------------GAYDEEMQVWGGENLEMSFRVWQCGGS 415 (605)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~i------------GgfDe~~~~~g~ED~dl~~Rl~~~G~~ 415 (605)
...+...+.... +...+|+.-++|-+++..- +.+.-... -+||--||.++..+|++
T Consensus 499 --------~l~Ka~ESvFG~--VsclPGcfs~yR~~aL~~~~~~~~y~~~~~~~~~~~~~~--~geDR~L~~~llskgy~ 566 (862)
T KOG2571|consen 499 --------NLQKATESVFGC--VSCLPGCFSLYRASALMDQFVEYFYGEKFSGPRHGIQYS--LGEDRWLCTLLLSKGYR 566 (862)
T ss_pred --------HHHHhhhhhcee--EEecCchhHHHHHHHHhcchHHhhhchhhcCcccccccc--cchhHHHHHHHHhccce
Confidence 011111111111 2234455445554333211 01111112 37999999999999999
Q ss_pred EEEecceEEEEEc
Q psy10463 416 IEIAPCSHVAHLF 428 (605)
Q Consensus 416 i~~~p~s~v~H~~ 428 (605)
+.|++.|...-..
T Consensus 567 l~Y~a~s~a~t~~ 579 (862)
T KOG2571|consen 567 LKYVAASDAETEA 579 (862)
T ss_pred eeeeccccccccC
Confidence 9999988776443
No 164
>PF09258 Glyco_transf_64: Glycosyl transferase family 64 domain; InterPro: IPR015338 Members of this entry catalyse the transfer reaction of N-acetylglucosamine and N-acetylgalactosamine from the respective UDP-sugars to the non-reducing end of [glucuronic acid]beta 1-3[galactose]beta 1-O-naphthalenemethanol, an acceptor substrate analogue of the natural common linker of various glycosylaminoglycans. They are also required for the biosynthesis of heparan-sulphate []. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0031227 intrinsic to endoplasmic reticulum membrane; PDB: 1ON6_B 1OMZ_B 1OMX_B 1ON8_B.
Probab=94.67 E-value=0.062 Score=53.34 Aligned_cols=108 Identities=23% Similarity=0.247 Sum_probs=68.9
Q ss_pred ceEEEEe-echhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHH
Q psy10463 200 SSIVIVF-HNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLG 278 (605)
Q Consensus 200 vSVIIp~-~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G 278 (605)
.+|||.+ |.+. +.|.+.|.++.+.. .+.|||||=++....-. . ..... ...+|++++.+.|. -..|-.-
T Consensus 1 fTvvi~t~~~R~-~~L~~~l~~l~~~~---~l~~IvVvWn~~~~~P~--~-~~~~~-~~vpV~~~~~~~ns--LnnRF~p 70 (247)
T PF09258_consen 1 FTVVINTSYKRS-DLLKRLLRHLASSP---SLRKIVVVWNNPNPPPP--S-SKWPS-TGVPVRVVRSSRNS--LNNRFLP 70 (247)
T ss_dssp EEEEEEE-SS-H-HHHHHHHHHHTTST---TEEEEEEEEE-TS--TH--H-HHHT----S-EEEEEESSHH--GGGGGS-
T ss_pred CEEEEEecccch-HHHHHHHHHHHcCC---CCCeEEEEeCCCCCCCc--c-cccCC-CCceEEEEecCCcc--HHhcCcC
Confidence 4789999 9998 99999999984332 24799999665322110 1 12222 22478998866521 1122233
Q ss_pred HhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEe
Q psy10463 279 ARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVC 317 (605)
Q Consensus 279 ~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~ 317 (605)
...-+.+.|+.+|+|..++.+.|+-..+..++.+..+||
T Consensus 71 ~~~i~T~AVl~~DDDv~~~~~~l~faF~~W~~~pdrlVG 109 (247)
T PF09258_consen 71 DPEIETDAVLSLDDDVMLSCDELEFAFQVWREFPDRLVG 109 (247)
T ss_dssp -TT--SSEEEEEETTEEE-HHHHHHHHHHHCCSTTSEEE
T ss_pred ccccCcceEEEecCCcccCHHHHHHHHHHHHhChhheeC
Confidence 345688999999999999999999999999999988877
No 165
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=94.65 E-value=0.21 Score=53.20 Aligned_cols=207 Identities=17% Similarity=0.173 Sum_probs=108.4
Q ss_pred cCCcceEEEEeechhhHH----HHHHHHHHHhcCCCCCceeEEEeeCCCChHHH-H--HHHHHHHHHCC--CCEEEEeCC
Q psy10463 196 FLPKSSIVIVFHNEAWSA----LLRTVHSVISRSPRSMLKEILLVDDASTREFL-K--SSLDEYVAKLS--VPTRVIRSP 266 (605)
Q Consensus 196 ~~p~vSVIIp~~n~~~~~----l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~-~--~~l~~~~~~~~--~~v~~i~~~ 266 (605)
...+..|++|+|||.... |..+-+|+.+.... ..+.+.|.-|..+.+.. . +..-+++++.. .+|-|-+..
T Consensus 142 ~~hrTAilmPiynEd~~rVfAgLrA~~eSla~Tg~~-~~FD~FVLSDs~dpdialAEq~a~~~l~~e~~g~~~ifYRrRr 220 (736)
T COG2943 142 DLHRTAILMPIYNEDVNRVFAGLRATYESLAATGHA-EHFDFFVLSDSRDPDIALAEQKAWAELCRELGGEGNIFYRRRR 220 (736)
T ss_pred cccceeEEeeccccCHHHHHHHHHHHHHHHHhhCCc-ccceEEEEcCCCCchhhhhHHHHHHHHHHHhCCCCceeeehHh
Confidence 344588999999998433 45555566554333 33788777665443321 1 11223344443 245444444
Q ss_pred CCCChHHHHHHH--Hhh--ccCCEEEEecCCcccCcChHHHHHHHHHcCCcE-EEeeeEeeecCCeeEEecc--ccc-ce
Q psy10463 267 GRVGLIKARLLG--ARQ--AEGEILVFLDAHCECTLGWLENLVARVAEDRTR-VVCPVIDIISDVTFAYVRS--FEL-HW 338 (605)
Q Consensus 267 ~n~G~~~arN~G--~~~--A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~-vv~p~i~~i~~~~~~~~~~--~~~-~~ 338 (605)
+|.|--.+ |.+ .+. ...++.+.||+|..+..+.+-.|++.++.++.. ++...=..++.++. |... +.. ..
T Consensus 221 ~n~~RKaG-NIaDfcrRwG~~Y~~MlVLDADSvMtgd~lvrLv~~ME~~P~aGlIQt~P~~~gg~TL-~AR~qQFatrvY 298 (736)
T COG2943 221 RNVKRKAG-NIADFCRRWGSAYSYMLVLDADSVMTGDCLVRLVRLMEANPDAGLIQTSPKASGGDTL-YARCQQFATRVY 298 (736)
T ss_pred hhhccccc-CHHHHHHHhCcccceEEEeecccccCchHHHHHHHHHhhCCCCceeecchhhcCcchH-HHHHHHHHHHHh
Confidence 43332111 111 111 246899999999999999999999999999873 32211112333332 1000 000 01
Q ss_pred eeeeccceeeEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCc--ccccccc----hhhHHHHHHHHc
Q psy10463 339 GAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDE--EMQVWGG----ENLEMSFRVWQC 412 (605)
Q Consensus 339 g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe--~~~~~g~----ED~dl~~Rl~~~ 412 (605)
|..-+ ....|+..+ -....|.+-.||.+.|-+.-|..+ +-..+|| -|+-=+.-+++.
T Consensus 299 Gpl~~-~GLawW~~~----------------Es~yWGHNAIIRt~aF~~hcgLp~LpG~~pFgG~ilSHDfvEAALmRRa 361 (736)
T COG2943 299 GPLFT-AGLAWWQLG----------------ESHYWGHNAIIRTKAFIEHCGLPPLPGRGPFGGHILSHDFVEAALMRRA 361 (736)
T ss_pred chHHh-hhhHHHhcc----------------ccccccccceeechhhHHhcCCCCCCCCCCCCccccchHHHHHHHHhhc
Confidence 10000 000111111 124567777889999888765532 1111233 244445557788
Q ss_pred CCeEEEecce
Q psy10463 413 GGSIEIAPCS 422 (605)
Q Consensus 413 G~~i~~~p~s 422 (605)
|+.+.+.|+.
T Consensus 362 GW~v~ia~dL 371 (736)
T COG2943 362 GWGVWIAYDL 371 (736)
T ss_pred CceEEEeccC
Confidence 9998887754
No 166
>PF13733 Glyco_transf_7N: N-terminal region of glycosyl transferase group 7; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=94.07 E-value=0.21 Score=44.01 Aligned_cols=75 Identities=15% Similarity=0.147 Sum_probs=46.7
Q ss_pred CcceEEEEeechhhHHHHHHHH---HHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHH
Q psy10463 198 PKSSIVIVFHNEAWSALLRTVH---SVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKA 274 (605)
Q Consensus 198 p~vSVIIp~~n~~~~~l~~~l~---sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~a 274 (605)
-++.||||.+|+. ..|...|. .++.+..- .+.|+||....+. .+..+.-
T Consensus 47 ~kvAiIIPyRdR~-~hL~~fl~~l~~~L~rQ~~--~y~I~vieQ~~~~-------------------------~FNRg~L 98 (136)
T PF13733_consen 47 HKVAIIIPYRDRE-EHLRIFLPHLHPFLQRQQL--DYRIFVIEQVDNG-------------------------PFNRGKL 98 (136)
T ss_dssp -EEEEEEEESS-H-HHHHHHHHHHHHHHHHTT---EEEEEEEEE-SSS----------------------------HHHH
T ss_pred cceEEEEEeCCHH-HHHHHHHHHHHHHHhhCcc--eEEEEEEeeccCC-------------------------CCchhhh
Confidence 4799999999998 66655444 45554432 3788888754322 1445666
Q ss_pred HHHHHhhc----cCCEEEEecCCcccCcCh
Q psy10463 275 RLLGARQA----EGEILVFLDAHCECTLGW 300 (605)
Q Consensus 275 rN~G~~~A----~gd~i~flD~D~~~~~~~ 300 (605)
.|.|...| .-|.++|-|-|..+..+.
T Consensus 99 ~NvGf~eA~~~~~~dc~ifHDVDllP~~~~ 128 (136)
T PF13733_consen 99 MNVGFLEALKDDDFDCFIFHDVDLLPENDR 128 (136)
T ss_dssp HHHHHHHHHHHS--SEEEEE-TTEEESBTT
T ss_pred hhHHHHHHhhccCCCEEEEecccccccCCC
Confidence 78887766 368999999998876543
No 167
>PLN02436 cellulose synthase A
Probab=94.01 E-value=1.2 Score=52.19 Aligned_cols=196 Identities=10% Similarity=0.053 Sum_probs=111.2
Q ss_pred CCCCcEEEEEEeecC---chHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHH--HHHhcCCCeEEeecCCCc
Q psy10463 87 EFLPKSSIVIVFHNE---AWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDE--YVAKLSVPTRVIRSPGRV 161 (605)
Q Consensus 87 ~~~p~~Siiip~yN~---~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~--~~~~~~~~v~~~~~~~~~ 161 (605)
.++|.|.|.|+|-+. ..-....|+-||++-.||....-+-|-|||.+.-|..+..+. +++..=|=.|-...+.|.
T Consensus 362 s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FAk~WvPFCkK~~IepRa 441 (1094)
T PLN02436 362 SELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFSIEPRA 441 (1094)
T ss_pred ccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCC
Confidence 459999999999754 446778899999999999877789999999999997665443 322221112211111111
Q ss_pred chHHHHHHHhhhccCceEEEec-CccccccccccccCCcceEEEEeechhhHHHHHHHHHHHhc--CCCC----------
Q psy10463 162 GLIKARLLGARQAEGEILVFLD-AHCECTLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISR--SPRS---------- 228 (605)
Q Consensus 162 G~~~a~n~g~~~a~g~~i~~lD-~d~~~~~~~~~~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q--~~~~---------- 228 (605)
-.+- ... +.++. -| ...+...+|..- .++.+.++..|+++.+. ..+.
T Consensus 442 Pe~Y---Fs~---~~~~~--~~~~~~~F~~e~~~m------------KreYEe~K~RIe~l~~~~~~vp~~~~~m~dgt~ 501 (1094)
T PLN02436 442 PEWY---FSQ---KMDYL--KNKVHPAFVRERRAM------------KREYEEFKVKINALVATAQKVPEDGWTMQDGTP 501 (1094)
T ss_pred HHHH---hhc---cCCcc--cccCChhHHHHHHHH------------HHHHHHHHHHHHHHHhhcccCchhhhhhccCcc
Confidence 1000 000 00000 00 000010111100 01125566666666542 1110
Q ss_pred ----------CceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCC-----hHHHHHHHHhhc----cCCEEEE
Q psy10463 229 ----------MLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVG-----LIKARLLGARQA----EGEILVF 289 (605)
Q Consensus 229 ----------~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G-----~~~arN~G~~~A----~gd~i~f 289 (605)
...+|++ |.....+ .. -..+| ++.|+..+++.| .++|+|.-++.+ .++||+-
T Consensus 502 W~g~~~~dHp~IIqVll-~~~~~~d-~~------g~~LP-~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaP~ILN 572 (1094)
T PLN02436 502 WPGNNVRDHPGMIQVFL-GHSGVRD-VE------GNELP-RLVYVSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLN 572 (1094)
T ss_pred CCCCCCCCCccceEEEe-cCCCCcc-cc------cccCc-eEEEEecccCCCCCcchhhhhhhhhhhhheeecCCceEEe
Confidence 1123332 3211111 11 12366 889999999888 488999888754 7999999
Q ss_pred ecCCccc-CcChHHHHHHHHHcC
Q psy10463 290 LDAHCEC-TLGWLENLVARVAED 311 (605)
Q Consensus 290 lD~D~~~-~~~~L~~ll~~~~~~ 311 (605)
||.|... ++..+.+.+-.+-+.
T Consensus 573 LDCDmYiNns~a~r~AMCfllD~ 595 (1094)
T PLN02436 573 VDCDHYINNSKALREAMCFMMDP 595 (1094)
T ss_pred cccccccCchHHHHHhhhhhcCC
Confidence 9999976 788998888887653
No 168
>PLN02400 cellulose synthase
Probab=93.99 E-value=0.58 Score=54.72 Aligned_cols=203 Identities=11% Similarity=0.037 Sum_probs=112.1
Q ss_pred CCCCcEEEEEEeecC---chHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHH--HHHhcCCCeEEeecCCCc
Q psy10463 87 EFLPKSSIVIVFHNE---AWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDE--YVAKLSVPTRVIRSPGRV 161 (605)
Q Consensus 87 ~~~p~~Siiip~yN~---~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~--~~~~~~~~v~~~~~~~~~ 161 (605)
.++|.|.|.|+|-+. ..-....|+-||++-.||....-+-|-|||.+.-|..+..+. +++..=|=.|-...+.|.
T Consensus 353 s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~Al~Eaa~FA~~WvPFCkK~~IepRa 432 (1085)
T PLN02400 353 SQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRA 432 (1085)
T ss_pred ccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHHhhcchhhhcCCCcCC
Confidence 359999999999754 446677899999999999987889999999999997665543 222211111111111110
Q ss_pred chHHHHHHHhhhccCceEEEecC-ccccccccccccCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCC
Q psy10463 162 GLIKARLLGARQAEGEILVFLDA-HCECTLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDAS 240 (605)
Q Consensus 162 G~~~a~n~g~~~a~g~~i~~lD~-d~~~~~~~~~~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S 240 (605)
-.+ -... +.++. -|. ..+...+|.. -.+..+.++..|+++.+..... ..|.....|++
T Consensus 433 Pe~---YFs~---~~~~~--~~~~~~~F~~e~~~------------mK~eYEe~k~RIe~l~~~~~~~-~~~~~~m~dgt 491 (1085)
T PLN02400 433 PEF---YFAQ---KIDYL--KDKIQPSFVKERRA------------MKREYEEFKVRINALVAKAQKI-PEEGWTMQDGT 491 (1085)
T ss_pred HHH---Hhcc---CCCcc--cCCCchhhHHHHHH------------HHHHHHHHHHHHHHHHhhhccC-CccccccccCc
Confidence 000 0000 00000 000 0000001100 0011256667777765322111 01222233443
Q ss_pred --------ChHHHHHHHHHH-------HHHCCCCEEEEeCCCCCC-----hHHHHHHHHhh----ccCCEEEEecCCccc
Q psy10463 241 --------TREFLKSSLDEY-------VAKLSVPTRVIRSPGRVG-----LIKARLLGARQ----AEGEILVFLDAHCEC 296 (605)
Q Consensus 241 --------~d~~~~~~l~~~-------~~~~~~~v~~i~~~~n~G-----~~~arN~G~~~----A~gd~i~flD~D~~~ 296 (605)
+.+.+-+++-+- -..+| .+.|+..+++.| .++|+|.-++. +.++||+-||.|..+
T Consensus 492 ~W~g~~~~dHp~iIqVll~~~~~~d~~g~~LP-~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~ILNlDCDmY~ 570 (1085)
T PLN02400 492 PWPGNNPRDHPGMIQVFLGHSGGLDTDGNELP-RLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYF 570 (1085)
T ss_pred cCCCCCCCCCchhhhhhhcCCCCcccccccCc-eeEEEeccCCCCCCcchhhhhhHHHHHHhhhhcCCceEEeccccccc
Confidence 112211111100 01355 788999999888 48899988774 489999999999998
Q ss_pred -CcChHHHHHHHHHcC
Q psy10463 297 -TLGWLENLVARVAED 311 (605)
Q Consensus 297 -~~~~L~~ll~~~~~~ 311 (605)
++..+.+.+-.+-+.
T Consensus 571 Nns~a~r~AMCf~lD~ 586 (1085)
T PLN02400 571 NNSKALKEAMCFMMDP 586 (1085)
T ss_pred CCchhHHhhhhheecc
Confidence 788888888777553
No 169
>COG1209 RfbA dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]
Probab=93.54 E-value=5.5 Score=39.56 Aligned_cols=189 Identities=14% Similarity=0.151 Sum_probs=111.1
Q ss_pred EEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhc
Q psy10463 203 VIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQA 282 (605)
Q Consensus 203 IIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A 282 (605)
.+|.|+.+ .+.-+|..+...-- .+|+||-.--+....++.+.+ -+++..++.++.+++..|++.|.-.|-...
T Consensus 25 LlpV~~KP--mi~y~l~~L~~aGI----~dI~II~~~~~~~~~~~llGd-gs~~gv~itY~~Q~~p~GlA~Av~~a~~fv 97 (286)
T COG1209 25 LLPVYDKP--MIYYPLETLMLAGI----RDILIVVGPEDKPTFKELLGD-GSDFGVDITYAVQPEPDGLAHAVLIAEDFV 97 (286)
T ss_pred cceecCcc--hhHhHHHHHHHcCC----ceEEEEecCCchhhhhhhhcC-ccccCcceEEEecCCCCcHHHHHHHHHhhc
Confidence 46777765 67777777765432 477776433232322222211 123455899999999999999999999998
Q ss_pred c-CCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhhhc
Q psy10463 283 E-GEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKR 361 (605)
Q Consensus 283 ~-gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~ 361 (605)
. .+++++|.+..... =|++++..+.+...++......+-|+..|... ...-..+...+-
T Consensus 98 ~~~~f~l~LGDNi~~~--~l~~~~~~~~~~~~ga~i~~~~V~dP~rfGV~----------e~d~~~~v~~l~-------- 157 (286)
T COG1209 98 GDDDFVLYLGDNIFQD--GLSELLEHFAEEGSGATILLYEVDDPSRYGVV----------EFDEDGKVIGLE-------- 157 (286)
T ss_pred CCCceEEEecCceecc--ChHHHHHHHhccCCCcEEEEEEcCCcccceEE----------EEcCCCcEEEeE--------
Confidence 7 67777776555544 67888888776444333322223344433221 111000111111
Q ss_pred cCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEec
Q psy10463 362 KDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAP 420 (605)
Q Consensus 362 ~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p 420 (605)
..+..|- |.....|+.+++.++|+.+-..-+.-.. -.|=+|.--.....|..+....
T Consensus 158 EKP~~P~-SNlAvtGlY~~d~~Vf~~~~~ikPS~RG-ElEITd~i~~~i~~G~~~~~~~ 214 (286)
T COG1209 158 EKPKEPK-SNLAVTGLYFYDPSVFEAIKQIKPSARG-ELEITDAIDLYIEKGYLVVAIL 214 (286)
T ss_pred ECCCCCC-CceeEEEEEEeChHHHHHHHcCCCCCCC-ceEehHHHHHHHHcCcEEEEEE
Confidence 1112221 2334456788999999998776555443 2466788888889998876654
No 170
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=93.45 E-value=0.52 Score=46.88 Aligned_cols=101 Identities=21% Similarity=0.155 Sum_probs=72.6
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceE-EEEeCCCchhhHHHHHHHHHHhcC---------CCeEEee
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEI-LLVDDASTREFLKSSLDEYVAKLS---------VPTRVIR 156 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~Ei-ivvdD~S~d~~~~~~~~~~~~~~~---------~~v~~~~ 156 (605)
..-|+|=|++|.-|.+ +++..-.+.+.+.+||.....| .+|.|.+..+.+.+.++++++... ..|.+++
T Consensus 22 ~~~e~VLILtplrna~-~~l~~y~~~L~~L~YP~~lIsLgfLv~d~~e~d~t~~~l~~~~~~~q~~~~~~~~F~~itIl~ 100 (269)
T PF03452_consen 22 RNKESVLILTPLRNAA-SFLPDYFDNLLSLTYPHELISLGFLVSDSSEFDNTLKILEAALKKLQSHGPESKRFRSITILR 100 (269)
T ss_pred ccCCeEEEEEecCCch-HHHHHHHHHHHhCCCCchheEEEEEcCCCchhHHHHHHHHHHHHHHhccCcccCCcceEEEEc
Confidence 4568899999999988 9999999999999999977777 666666644444455665554432 1355655
Q ss_pred cCCC--------------------cchHHHHHHHhhhcc---CceEEEecCcccc
Q psy10463 157 SPGR--------------------VGLIKARLLGARQAE---GEILVFLDAHCEC 188 (605)
Q Consensus 157 ~~~~--------------------~G~~~a~n~g~~~a~---g~~i~~lD~d~~~ 188 (605)
.+-. .-+++|||.-+..|- ..|++++|+|..-
T Consensus 101 ~df~~~~~~~~~~RH~~~~Q~~RR~~mAraRN~LL~~aL~p~~swVlWlDaDIv~ 155 (269)
T PF03452_consen 101 KDFGQQLSQDRSERHAFEVQRPRRRAMARARNFLLSSALGPWHSWVLWLDADIVE 155 (269)
T ss_pred CCCcccccCchhhccchhhHHHHHHHHHHHHHHHHHhhcCCcccEEEEEecCccc
Confidence 4321 113778888777774 5899999999853
No 171
>PF03214 RGP: Reversibly glycosylated polypeptide; InterPro: IPR004901 Alpha-1,4-glucan-protein synthase catalyses the reaction: protein + UDP-D-glucose = alpha-D-glucosyl-protein + UDP The enzyme has a possible role in the synthesis of cell wall polysaccharides in plants []. It is found associated with the cell wall, with the highest concentrations in the plasmodesmata. It is also located in the Golgi apparatus.; GO: 0008466 glycogenin glucosyltransferase activity, 0016758 transferase activity, transferring hexosyl groups, 0007047 cellular cell wall organization, 0030244 cellulose biosynthetic process, 0005618 cell wall, 0030054 cell junction
Probab=93.38 E-value=0.13 Score=51.85 Aligned_cols=113 Identities=17% Similarity=0.206 Sum_probs=68.3
Q ss_pred CcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHH----HHHCCCCEEEEeCCC--CCCh
Q psy10463 198 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEY----VAKLSVPTRVIRSPG--RVGL 271 (605)
Q Consensus 198 p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~----~~~~~~~v~~i~~~~--n~G~ 271 (605)
..+.||||+-........+.-+.++. . +.+|||-|+...+.++ +.+-+ ..+.. -.+++-.+. ..--
T Consensus 8 ~~~divi~~~~~~l~~~~~~wr~~~~----~--~hliiv~d~~~~~~~~-~p~g~~~~~y~~~d-i~~~lg~~~~i~~~~ 79 (348)
T PF03214_consen 8 DEVDIVIPALRPNLTDFLEEWRPFFS----P--YHLIIVQDPDPNEEIK-VPEGFDYEVYNRND-IERVLGAKTLIPFKG 79 (348)
T ss_pred CcccEEeecccccHHHHHHHHHHhhc----c--eeEEEEeCCCcccccc-CCcccceeeecHhh-HHhhcCCcccccccc
Confidence 45789999988553344444455542 2 6888988875443221 00000 00000 001111111 1223
Q ss_pred HHHHHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEee
Q psy10463 272 IKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCP 318 (605)
Q Consensus 272 ~~arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p 318 (605)
...||.|.-.|+-+|++++|+||.+..++.-..++.+.++.....+|
T Consensus 80 ~a~R~fGyL~s~~~yivsiDDD~~P~~D~~g~~~~~v~qh~~~~~~~ 126 (348)
T PF03214_consen 80 DACRNFGYLVSKKDYIVSIDDDCLPAKDDFGTHIDAVAQHVENLSTP 126 (348)
T ss_pred cchhhhHhhhcccceEEEEccccccccCCccceehhhhccceeeecc
Confidence 56799999999999999999999999888888888887775554444
No 172
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane
Probab=93.28 E-value=1.1 Score=42.60 Aligned_cols=161 Identities=11% Similarity=0.106 Sum_probs=85.0
Q ss_pred eeEEEeeCCCC--hHHHHHHHHHHHHHCCCCEEEEeCCCC-CChH----HHHHHHHhhcc-CCEEEEecCCcccCcChHH
Q psy10463 231 KEILLVDDAST--REFLKSSLDEYVAKLSVPTRVIRSPGR-VGLI----KARLLGARQAE-GEILVFLDAHCECTLGWLE 302 (605)
Q Consensus 231 ~eIIvVDd~S~--d~~~~~~l~~~~~~~~~~v~~i~~~~n-~G~~----~arN~G~~~A~-gd~i~flD~D~~~~~~~L~ 302 (605)
..++.|-..+. +..+.+.+.+-.+.+. .+-.+...+. .++. .+.+-+.++.. .+|++..|+|+.+.+.-|.
T Consensus 21 ~~~~FvvG~~~~~~~~~~~~l~~E~~~y~-Dil~~d~~D~y~nlt~K~~~~~~w~~~~c~~~~~v~k~DDD~~vn~~~l~ 99 (195)
T PF01762_consen 21 VKVVFVVGESPNSDSDLQEALQEEAEKYG-DILQGDFVDSYRNLTLKTLAGLKWASKHCPNAKYVLKVDDDVFVNPDRLV 99 (195)
T ss_pred EEEEEEEecCCCCcHHHHHHhhhhhhhcC-ceEeeecccccchhhHHHHHHHHHHHhhCCchhheeecCcEEEEehHHhh
Confidence 35555543333 4555555665566666 4433333221 2332 33334444444 7999999999999988877
Q ss_pred HHHHHH--HcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhhhccCCCCccccccccceEEEE
Q psy10463 303 NLVARV--AEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAI 380 (605)
Q Consensus 303 ~ll~~~--~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i 380 (605)
..+... ......+.|..+. ...........|.. +.... ....-.|.+.|+++++
T Consensus 100 ~~L~~~~~~~~~~~~~g~~~~----------~~~~~r~~~~kw~v-------~~~~y-------~~~~yP~y~~G~~yvl 155 (195)
T PF01762_consen 100 SFLKSLKQDPSKNSIYGGCIK----------NGPPIRDPSSKWYV-------SEEEY-------PDDYYPPYCSGGGYVL 155 (195)
T ss_pred hhhhhcccCcccccccccccc----------CCccccccccCcee-------eeeec-------ccccCCCcCCCCeEEe
Confidence 777766 1122222222110 00000000111111 11111 1111234678999999
Q ss_pred eHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeE
Q psy10463 381 DRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSI 416 (605)
Q Consensus 381 ~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i 416 (605)
++++...|...-.....+..||+-+..=+...|.+.
T Consensus 156 s~~~v~~i~~~~~~~~~~~~eDv~iGi~~~~~~i~~ 191 (195)
T PF01762_consen 156 SSDVVKRIYKASSHTPFFPLEDVFIGILAEKLGIKP 191 (195)
T ss_pred cHHHHHHHHHHhhcCCCCCchHHHHHHHHHHCCCCc
Confidence 999999886543344444589998877666666543
No 173
>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus (Rhodothermus obamensis), this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.; GO: 0050504 mannosyl-3-phosphoglycerate synthase activity, 0051479 mannosylglycerate biosynthetic process, 0005737 cytoplasm; PDB: 2WVM_A 2WVL_A 2WVK_A 2ZU7_B 2ZU9_B 2ZU8_A.
Probab=93.15 E-value=0.98 Score=46.24 Aligned_cols=95 Identities=22% Similarity=0.274 Sum_probs=55.6
Q ss_pred CCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCc---hhh--HHHHHHHHHHhcCCCeEEeecCC----
Q psy10463 89 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDAST---REF--LKSSLDEYVAKLSVPTRVIRSPG---- 159 (605)
Q Consensus 89 ~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~---d~~--~~~~~~~~~~~~~~~v~~~~~~~---- 159 (605)
+-...||||+.||... .|+-||.--|.+ --||||-+.+. |.- -.+.+.++.......+-++++..
T Consensus 49 l~~maIVVP~KnE~l~----lleGVL~gIPh~--C~IIvVSNS~r~~~d~f~~E~d~l~~f~~~t~r~~~~vHQkDp~lA 122 (381)
T PF09488_consen 49 LSKMAIVVPCKNEKLK----LLEGVLSGIPHD--CLIIVVSNSSREPVDRFKMEVDLLKHFCRLTRRQIIIVHQKDPGLA 122 (381)
T ss_dssp HTTEEEEEEESS--HH----HHHHHHHCS-TT--SEEEEEE---CSSSCHHHHHHHHHHHHHHHCT--EEEEETT-HHHH
T ss_pred HhCcEEEEECCCCchh----hhhhhhhcCCCC--CeEEEEECCCCCCccHHHHHHHHHHHHHHhhcCceEEEecCCHHHH
Confidence 4578999999999954 445555555444 47889988888 543 12344555554455566666543
Q ss_pred ------------------CcchHHHHHHHhhhc---cCceEEEecCccccc
Q psy10463 160 ------------------RVGLIKARLLGARQA---EGEILVFLDAHCECT 189 (605)
Q Consensus 160 ------------------~~G~~~a~n~g~~~a---~g~~i~~lD~d~~~~ 189 (605)
+.|++-+...|+..| ..+|+-|+|+|...+
T Consensus 123 ~Af~~aGy~~il~~~g~VR~GKgEGMiiGillAk~~g~~YVGFvDADNyiP 173 (381)
T PF09488_consen 123 EAFKEAGYPEILDEDGLVRNGKGEGMIIGILLAKAPGKRYVGFVDADNYIP 173 (381)
T ss_dssp HHHHHTT--TTB-TTSSB-SSHHHHHHHHHHHHHHTT-SEEEE--TTBS-H
T ss_pred HHHHHcCcHHHhCCCCceecCchHHHHHHHHHHHhcCCceEeEeeccCCCc
Confidence 567888888888777 579999999998664
No 174
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=93.11 E-value=0.33 Score=51.62 Aligned_cols=101 Identities=18% Similarity=0.247 Sum_probs=53.8
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCC-------
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG------- 159 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~------- 159 (605)
...|.+-|+|-+||.. .+|.+||+|++...+....+.|||-.||+...+ .+.+..| ...++++++..
T Consensus 90 ~~~~~~pVlV~AcNRp-~yl~r~L~sLl~~rp~~~~fpIiVSQDg~~~~~-~~vi~~y----~~~v~~i~~~~~~~i~~~ 163 (434)
T PF03071_consen 90 NKEPVIPVLVFACNRP-DYLRRTLDSLLKYRPSAEKFPIIVSQDGDDEEV-AEVIKSY----GDQVTYIQHPDFSPITIP 163 (434)
T ss_dssp -------EEEEESS-T-T-HHHHHHHHHHH-S-TTTS-EEEEE-TT-HHH-HHHHHGG----GGGSEEEE-S--S-----
T ss_pred cCCCcceEEEEecCCc-HHHHHHHHHHHHcCCCCCCccEEEEecCCcHHH-HHHHHHh----hhhheeeecCCcCCceeC
Confidence 3467789999999999 999999999999766554578999999998875 3333333 33344444321
Q ss_pred --C-c--c---hHHHHHHHhhh----ccCceEEEecCccccccccc
Q psy10463 160 --R-V--G---LIKARLLGARQ----AEGEILVFLDAHCECTLVFN 193 (605)
Q Consensus 160 --~-~--G---~~~a~n~g~~~----a~g~~i~~lD~d~~~~~~~~ 193 (605)
. . | ++.-.-.|+.. -..+.+++++-|.++.+++.
T Consensus 164 ~~~~~~~~y~~IA~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf 209 (434)
T PF03071_consen 164 PKEKKFKGYYKIARHYKWALSQVFNKFKYSSVIILEDDLEISPDFF 209 (434)
T ss_dssp TT-GGGHHHHHHHHHHHHHHHHHHHTS--SEEEEEETTEEE-TTHH
T ss_pred cccccccchHHHHHHHHHHHHHHHHhcCCceEEEEecCcccCccHH
Confidence 1 0 1 11111223333 25678999999998887664
No 175
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=92.17 E-value=1.6 Score=49.18 Aligned_cols=108 Identities=18% Similarity=0.267 Sum_probs=67.4
Q ss_pred CCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCC---hHHH--HHHHHHHHHHCCCCEEEEeCCC----
Q psy10463 197 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDAST---REFL--KSSLDEYVAKLSVPTRVIRSPG---- 267 (605)
Q Consensus 197 ~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~---d~~~--~~~l~~~~~~~~~~v~~i~~~~---- 267 (605)
.-...||||+.||.. ..|+.++.--|.. +-||||-|.+. |... .+.+..+..-...++-++++..
T Consensus 54 ~~~~aivvp~k~e~~----~~~~gvl~~ip~~--c~ii~vsns~r~~~d~~~~e~~~~~~~~~~~~~~~~~vhq~dp~~a 127 (694)
T PRK14502 54 EKKMAIVLPIKDEDL----KVFEGVLSGIPHD--CLMIVISNSSKQEVDNFKNEKDIVNRFCRITHRQAIVVHQKNPELA 127 (694)
T ss_pred HhCcEEEEEcCCCch----hHHhhHhhcCCCC--CeEEEEeCCCCCchHHHHHHHHHHHHHHHhhcCceEEEEcCCHHHH
Confidence 456889999999993 3445555555555 68888887664 3211 1244445443322455555432
Q ss_pred ------------------CCChHHHHHHHHhhc---cCCEEEEecCCcccCcChHHHHHHHHHcC
Q psy10463 268 ------------------RVGLIKARLLGARQA---EGEILVFLDAHCECTLGWLENLVARVAED 311 (605)
Q Consensus 268 ------------------n~G~~~arN~G~~~A---~gd~i~flD~D~~~~~~~L~~ll~~~~~~ 311 (605)
+.|.+.++-.|+..| ..+||-|+|+|..+ |+...+.+..+..+
T Consensus 128 ~a~~~~g~~~~~~~~~~vr~gk~egm~~g~~la~~~g~~yvgfidadny~-pg~v~ey~~~yaag 191 (694)
T PRK14502 128 NAIADAGYPELLGEDGLIRSGKAEGMILGIILTMFSGRDYVGFIDTDNYI-PGAVWEYAKHFATG 191 (694)
T ss_pred HHHHHcCChhhhCCCCceecCcchHHHHHHHHHHhcCCceEeEeeccCCC-CchHHHHHHHHHhh
Confidence 345666677776555 45999999999988 56666666655443
No 176
>PLN02917 CMP-KDO synthetase
Probab=91.79 E-value=9 Score=39.08 Aligned_cols=184 Identities=14% Similarity=0.101 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeC--CCCCChHHHHHHHHhhcc--CCEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRS--PGRVGLIKARLLGARQAE--GEIL 287 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~--~~n~G~~~arN~G~~~A~--gd~i 287 (605)
+.+...++.+..... . .+|||+- .++.+ .++.... .++++.. ....|.+++. .|++... .|++
T Consensus 73 PLL~~vi~~a~~~~~-~--~~VVV~~---~~e~I----~~~~~~~--~v~vi~~~~~~~~GT~~~~-~a~~~l~~~~d~V 139 (293)
T PLN02917 73 PMIQRTWERAKLATT-L--DHIVVAT---DDERI----AECCRGF--GADVIMTSESCRNGTERCN-EALKKLEKKYDIV 139 (293)
T ss_pred EHHHHHHHHHHcCCC-C--CEEEEEC---ChHHH----HHHHHHc--CCEEEeCCcccCCchHHHH-HHHHhccCCCCEE
Confidence 456666666654332 2 2455542 22222 3333433 3555543 3445666653 5665543 6899
Q ss_pred EEecCCcc-cCcChHHHHHHHHHcCCcEEEeeeEeeec-CCeeEEecccccce-eeeeccceeeEeecCchhHhhhccCC
Q psy10463 288 VFLDAHCE-CTLGWLENLVARVAEDRTRVVCPVIDIIS-DVTFAYVRSFELHW-GAFNWELHFRWYTYGSSDAIIKRKDF 364 (605)
Q Consensus 288 ~flD~D~~-~~~~~L~~ll~~~~~~~~~vv~p~i~~i~-~~~~~~~~~~~~~~-g~~~~~l~~~~~~~~~~~~~~~~~~~ 364 (605)
+++++|.- +.+..|+.+++.+.++...++...+..++ ++.+.|..-..... .+. .+.|....++.. ++.
T Consensus 140 lil~gD~PlI~~~tI~~li~~~~~~~~~iv~t~~~~~~~~~~~~ygrv~vv~~~~g~--alyfsr~~Ipe~------kd~ 211 (293)
T PLN02917 140 VNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDASDPNRVKCVVDNQGY--AIYFSRGLIPYN------KSG 211 (293)
T ss_pred EEecCCcCCCCHHHHHHHHHHHHhcCCceEEEEeeecCHHHhcCCCceEEEECCCCe--EEEeecCcCCcC------CCc
Confidence 99999997 59999999999887655433322211111 11122211100000 000 011110101100 010
Q ss_pred C-CccccccccceEEEEeHHHHhHhCCCCcc-cc-cccchhhHHHHHHHHcCCeEEEec
Q psy10463 365 T-EPFKTPAMAGGLFAIDRAYFFHIGAYDEE-MQ-VWGGENLEMSFRVWQCGGSIEIAP 420 (605)
Q Consensus 365 ~-~~~~~~~~~G~~~~i~r~~f~~iGgfDe~-~~-~~g~ED~dl~~Rl~~~G~~i~~~p 420 (605)
. ..........|.++++++++..+...++. .. .++.||+ |+...|.++..++
T Consensus 212 ~~~~~~i~~~n~Giy~f~~~~L~~l~~l~~~n~e~e~yLtdl----~~le~G~~i~~~~ 266 (293)
T PLN02917 212 KVNPQFPYLLHLGIQSYDAKFLKIYPELPPTPLQLEEDLEQL----KVLENGYKMKVIK 266 (293)
T ss_pred ccccccceEEEEEEEEeCHHHHHHHHcCCCCcccchhccHHH----HHHhCCCceEEEE
Confidence 0 00111245678999999998887766543 21 2334554 5789999987664
No 177
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=91.73 E-value=2.3 Score=49.83 Aligned_cols=194 Identities=9% Similarity=0.035 Sum_probs=107.7
Q ss_pred CCCcEEEEEEeecC---chHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHH--HHHhcCCCeEEeecCCCcc
Q psy10463 88 FLPKSSIVIVFHNE---AWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDE--YVAKLSVPTRVIRSPGRVG 162 (605)
Q Consensus 88 ~~p~~Siiip~yN~---~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~--~~~~~~~~v~~~~~~~~~G 162 (605)
.+|.|.|.|+|-+. ..-....|+-||++-.||....-+-|-|||.+.-|..+..+. +++..=|=.|-...+.|.-
T Consensus 285 ~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FAk~WvPFCkK~~IepRaP 364 (1044)
T PLN02915 285 RLAPVDVFVSTVDPLKEPPIITANTVLSILAVDYPVDKVSCYVSDDGASMLLFDTLSETAEFARRWVPFCKKHNIEPRAP 364 (1044)
T ss_pred cCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHhHHHHHHHHHHHHHhhcchhhhcCCCcCCH
Confidence 49999999999754 446677899999999999877789999999999987665443 2222211111111111110
Q ss_pred hHHHHHHHhhhccCceEEEecC-ccccccccccccCCcceEEEEeechhhHHHHHHHHHHHhcC--CC------------
Q psy10463 163 LIKARLLGARQAEGEILVFLDA-HCECTLVFNEEFLPKSSIVIVFHNEAWSALLRTVHSVISRS--PR------------ 227 (605)
Q Consensus 163 ~~~a~n~g~~~a~g~~i~~lD~-d~~~~~~~~~~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~--~~------------ 227 (605)
.+- ... +.++. -|. ..+...+|..- .++.+.++..|+++.+.. .+
T Consensus 365 e~Y---Fs~---~~~~~--~~~~~~~F~~e~~~m------------KreYEe~K~RIe~l~~~~~~~~~~~~~m~dgt~W 424 (1044)
T PLN02915 365 EFY---FSQ---KIDYL--KDKVQPTFVKERRAM------------KREYEEFKVRINALVAKAQKKPEEGWVMQDGTPW 424 (1044)
T ss_pred HHH---hcc---CCCcc--ccccCchhHHHHHHH------------HHHHHHHHHHHHHHHhhhccCCcccccccCCccC
Confidence 000 000 00000 000 00000011000 011255666666665331 00
Q ss_pred --------CCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCC-----hHHHHHHHHhhc----cCCEEEEe
Q psy10463 228 --------SMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVG-----LIKARLLGARQA----EGEILVFL 290 (605)
Q Consensus 228 --------~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G-----~~~arN~G~~~A----~gd~i~fl 290 (605)
....+|++ |+ +...... -..+| .+-|+..+++.| .++|+|.-++.+ .++||+-|
T Consensus 425 ~g~~~~dHp~IIqVll-~~-~~~~d~~------g~~lP-~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~iLNl 495 (1044)
T PLN02915 425 PGNNTRDHPGMIQVYL-GS-EGALDVE------GKELP-RLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPFMLNL 495 (1044)
T ss_pred CCCCCCCCccceEEee-cC-CCCcccc------cCccc-eeEEEecccCCCCCcchhhhhhhhHhhhhheeecCcEEEee
Confidence 01123332 22 2210000 01366 888998898888 488899887765 79999999
Q ss_pred cCCccc-CcChHHHHHHHHHc
Q psy10463 291 DAHCEC-TLGWLENLVARVAE 310 (605)
Q Consensus 291 D~D~~~-~~~~L~~ll~~~~~ 310 (605)
|.|... ++..+.+.+-.+-+
T Consensus 496 DCDmY~Nns~a~r~AMCf~lD 516 (1044)
T PLN02915 496 DCDHYINNSKAVREAMCFLMD 516 (1044)
T ss_pred ccccccCcchhhHhhceeeec
Confidence 999987 67777776666544
No 178
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]
Probab=91.68 E-value=0.76 Score=44.87 Aligned_cols=96 Identities=11% Similarity=0.151 Sum_probs=60.7
Q ss_pred CCcEEEEEEeecCch-H-HHHHHHH--HHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcch-
Q psy10463 89 LPKSSIVIVFHNEAW-S-ALLRTVH--SVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGL- 163 (605)
Q Consensus 89 ~p~~Siiip~yN~~~-~-~l~~~l~--sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~- 163 (605)
||.+++|||+--.+. . .-.+... +.+.--.+....++|+++.-+... ..+..|+...+ ++-++.......+
T Consensus 1 m~~~~~iiPv~~S~e~p~~~~R~f~~~~~~k~fts~~~~~vi~~~~~~~~d---~~i~~~i~~~~-~~~yl~~~s~~~F~ 76 (346)
T COG4092 1 MQPNGEIIPVAESEELPLTDSRQFSRTSAVKVFTSSDITMVICLRAHEVMD---RLIRSYIDPMP-RVLYLDFGSPEPFA 76 (346)
T ss_pred CCCcceEeecchhhccchhHHHHHhhHhhhhhccccccEEEEEEecchhHH---HHHHHHhcccc-ceEEEecCCCcccc
Confidence 577899999886542 1 1122222 222222334457999998887544 34666666554 4666665444444
Q ss_pred --HHHHHHHhhhcc----CceEEEecCcccc
Q psy10463 164 --IKARLLGARQAE----GEILVFLDAHCEC 188 (605)
Q Consensus 164 --~~a~n~g~~~a~----g~~i~~lD~d~~~ 188 (605)
+..+|.|+..+. .++++|+|.||-.
T Consensus 77 s~~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~ 107 (346)
T COG4092 77 SETICANNGADYSHEKCESNLVLFLDVDCFG 107 (346)
T ss_pred chhhhhhccchhhhccccccEEEEEeccccc
Confidence 456788888886 9999999999954
No 179
>KOG1413|consensus
Probab=91.65 E-value=1.8 Score=44.16 Aligned_cols=109 Identities=15% Similarity=0.134 Sum_probs=76.8
Q ss_pred ccccCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCC------
Q psy10463 193 NEEFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSP------ 266 (605)
Q Consensus 193 ~~~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~------ 266 (605)
+....|.+.||+-..|++ +.+.+++..++..-|....+.|||--|++..+ +++.+..|-+ .+..+.++
T Consensus 62 ~~~~~~v~pvvVf~csR~-~~lr~~v~kll~yrPsaekfpiiVSQD~~~e~-vk~~~~~~g~----~v~~i~~~~h~~~e 135 (411)
T KOG1413|consen 62 LKNWPPVIPVVVFACSRA-DALRRHVKKLLEYRPSAEKFPIIVSQDCEKEA-VKKKLLSYGS----DVSHIQHPMHLKDE 135 (411)
T ss_pred ccCCCCceeEEEEecCcH-HHHHHHHHHHHHhCcchhhcCEEEeccCCcHH-HHHHHHHhcc----chhhhcCccccccc
Confidence 344577888999999999 99999999999988777767888888887665 4445555433 22222222
Q ss_pred -------C-CCC-------hHHHHHHHHhhccCCEEEEecCCcccCcChHHHHHHH
Q psy10463 267 -------G-RVG-------LIKARLLGARQAEGEILVFLDAHCECTLGWLENLVAR 307 (605)
Q Consensus 267 -------~-n~G-------~~~arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~ 307 (605)
. ..| +-.|.|.....-+.+.++...+|....|++.+-....
T Consensus 136 i~v~~~~~k~~~Yy~IarHYkwAL~q~F~~~~~s~vii~eDDl~iapDFF~YF~~t 191 (411)
T KOG1413|consen 136 ISVPPRHKKFNAYYKIARHYKWALNQLFIVFRESRVIITEDDLNIAPDFFSYFRNT 191 (411)
T ss_pred cccCCcccccchhHHHHHHHHHHHhhHHhhcCCceeEEecchhhhhhHHHHHHHHH
Confidence 1 112 2344555565567889999999999999998887665
No 180
>PF04666 Glyco_transf_54: N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region; InterPro: IPR006759 The complex-type of oligosaccharides are synthesised through elongation by glycosyltransferases after trimming of the precursor oligosaccharides transferred to proteins in the endoplasmic reticulum. N-Acetylglucosaminyltransferases (GnTs) take part in the formation of branches in the biosynthesis of complex-type sugar chains. In vertebrates, six GnTs, designated as GnT-I to -VI, which catalyse the transfer of GlcNAc to the core mannose residues of Asn-linked sugar chains, have been identified. GnT-IV (2.4.1.145 from EC) catalyzes the transfer of GlcNAc from UDP-GlcNAc to the GlcNAc1-2Man1-3 arm of core oligosaccharide [Gn2(22)core oligosaccharide] and forms a GlcNAc1-4(GlcNAc1-2)Man1-3 structure on the core oligosaccharide (Gn3(2,4,2)core oligosaccharide). In some members the conserved region occupies all but the very N-terminal, where there is a signal sequence on all members. For other members the conserved region does not occupy the entire protein but is still to the N-terminal end of the protein [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane
Probab=91.49 E-value=1 Score=45.76 Aligned_cols=46 Identities=15% Similarity=0.097 Sum_probs=37.4
Q ss_pred eCCCCCChHHHHHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcC
Q psy10463 264 RSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAED 311 (605)
Q Consensus 264 ~~~~n~G~~~arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~ 311 (605)
+...+.-++-.++.+. ..|+|++.|.+|+...|+|+..+...+..-
T Consensus 152 rsKq~lDya~Lm~y~~--~~~~YyL~LEDDVia~~~f~~~i~~~v~~~ 197 (297)
T PF04666_consen 152 RSKQNLDYAFLMNYCQ--NLGDYYLQLEDDVIAAPGFLSRIKRFVEAW 197 (297)
T ss_pred HHhhcccHHHHHHHHH--hcCCeEEEecCCeEechhHHHHHHHHHHHh
Confidence 3455677777777654 468899999999999999999999998764
No 181
>PRK15480 glucose-1-phosphate thymidylyltransferase RfbA; Provisional
Probab=91.44 E-value=13 Score=37.77 Aligned_cols=101 Identities=12% Similarity=0.192 Sum_probs=62.0
Q ss_pred EEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhc
Q psy10463 203 VIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQA 282 (605)
Q Consensus 203 IIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A 282 (605)
.+|.++.+ .+...|.++....- .+|++|-.....+...+.+.+ ...++.++.++..+...|.+.|.-.|....
T Consensus 28 Llpv~gkP--mI~~~l~~l~~aGi----~~I~ii~~~~~~~~~~~~l~~-g~~~g~~i~y~~q~~~~Gta~Al~~a~~~i 100 (292)
T PRK15480 28 LLPIYDKP--MIYYPLSTLMLAGI----RDILIISTPQDTPRFQQLLGD-GSQWGLNLQYKVQPSPDGLAQAFIIGEEFI 100 (292)
T ss_pred EeEECCEE--HHHHHHHHHHHCCC----CEEEEEecCCchHHHHHHHcC-ccccCceeEEEECCCCCCHHHHHHHHHHHh
Confidence 56777764 67777777765422 488766443322222222211 122444688888888899999988888776
Q ss_pred cC-CEEEEecCCcccCcChHHHHHHHHHcC
Q psy10463 283 EG-EILVFLDAHCECTLGWLENLVARVAED 311 (605)
Q Consensus 283 ~g-d~i~flD~D~~~~~~~L~~ll~~~~~~ 311 (605)
.+ ++++++ +|..+...-+..+++...+.
T Consensus 101 ~~~~~~lv~-gD~i~~~~~l~~ll~~~~~~ 129 (292)
T PRK15480 101 GGDDCALVL-GDNIFYGHDLPKLMEAAVNK 129 (292)
T ss_pred CCCCEEEEE-CCeeeeccCHHHHHHHHHhC
Confidence 43 666655 55555444578888876543
No 182
>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase. This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.
Probab=91.43 E-value=5.1 Score=40.97 Aligned_cols=94 Identities=24% Similarity=0.307 Sum_probs=59.6
Q ss_pred CCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCc---hhh--HHHHHHHHHHhcCCCeEEeecCC----
Q psy10463 89 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDAST---REF--LKSSLDEYVAKLSVPTRVIRSPG---- 159 (605)
Q Consensus 89 ~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~---d~~--~~~~~~~~~~~~~~~v~~~~~~~---- 159 (605)
+-...||||+.||... .|+-|+.--|.+ --||||-+.+. |.- -.+.+..+..-....+-++++..
T Consensus 49 ~~~maIVVP~KdE~l~----lleGVL~gIPh~--c~iIvVSNS~r~~~d~f~~E~d~~~~f~~~t~r~~i~vHQkDp~la 122 (381)
T TIGR02460 49 LGKTAIVVPVKNEKLH----LLEGVLSGIPHE--CPIIIVSNSKREPPDRFKMEVDLIRHFSNLTHRKIIIIHQKDPALA 122 (381)
T ss_pred HhCcEEEEEcCCCchh----HHhhHhhcCCCC--CeEEEEeCCCCCChhHHHHHHHHHHHHHHhhcCceEEEEcCCHHHH
Confidence 4568999999999954 445555554443 36788887776 321 12233344333334455554432
Q ss_pred ------------------CcchHHHHHHHhhhc---cCceEEEecCcccc
Q psy10463 160 ------------------RVGLIKARLLGARQA---EGEILVFLDAHCEC 188 (605)
Q Consensus 160 ------------------~~G~~~a~n~g~~~a---~g~~i~~lD~d~~~ 188 (605)
+.|++-+...|+..| ..+|+-|+|+|...
T Consensus 123 ~Af~~~gy~~il~~~g~VR~GKgEGMiiG~lLAk~~g~~YVGFiDaDNyi 172 (381)
T TIGR02460 123 EAFKEVGYTSILGENGRVRSGKGEGMLLGLLLAKAIGAEYVGFVDADNYF 172 (381)
T ss_pred HHHHHcCchhhhCCCCceecCcchHHHHHHHHHHHhCCceEeEeecccCC
Confidence 467777777887776 57999999999844
No 183
>cd06915 NTP_transferase_WcbM_like WcbM_like is a subfamily of nucleotidyl transferases. WcbM protein of Burkholderia mallei is involved in the biosynthesis, export or translocation of capsule. It is a subfamily of nucleotidyl transferases that transfer nucleotides onto phosphosugars.
Probab=91.40 E-value=14 Score=35.43 Aligned_cols=92 Identities=14% Similarity=0.123 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHH---CCCCEEEEeCCCCCChHHHHHHHHhhccCCEEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAK---LSVPTRVIRSPGRVGLIKARLLGARQAEGEILV 288 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~---~~~~v~~i~~~~n~G~~~arN~G~~~A~gd~i~ 288 (605)
+.+...+..+.+.. ..+|+|+-+... +. +.++... ++..+.+.......|.+.+.-.|++....+.++
T Consensus 30 pli~~~l~~l~~~g----~~~v~vv~~~~~-~~----i~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~~~~~~~~l 100 (223)
T cd06915 30 PFLEYLLEYLARQG----ISRIVLSVGYLA-EQ----IEEYFGDGYRGGIRIYYVIEPEPLGTGGAIKNALPKLPEDQFL 100 (223)
T ss_pred chHHHHHHHHHHCC----CCEEEEEcccCH-HH----HHHHHcCccccCceEEEEECCCCCcchHHHHHHHhhcCCCCEE
Confidence 46777777766542 136777654322 22 2223322 122355566566788888888888877678899
Q ss_pred EecCCcccCcChHHHHHHHHHcCCc
Q psy10463 289 FLDAHCECTLGWLENLVARVAEDRT 313 (605)
Q Consensus 289 flD~D~~~~~~~L~~ll~~~~~~~~ 313 (605)
++++|..++. .+..+++.+.+...
T Consensus 101 v~~~D~~~~~-~~~~~l~~~~~~~~ 124 (223)
T cd06915 101 VLNGDTYFDV-DLLALLAALRASGA 124 (223)
T ss_pred EEECCcccCC-CHHHHHHHHHhCCC
Confidence 9999997754 46778777655433
No 184
>PLN02248 cellulose synthase-like protein
Probab=91.34 E-value=5.6 Score=46.96 Aligned_cols=56 Identities=13% Similarity=0.071 Sum_probs=47.1
Q ss_pred CCCCcEEEEEEeecC---chHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHH
Q psy10463 87 EFLPKSSIVIVFHNE---AWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLD 142 (605)
Q Consensus 87 ~~~p~~Siiip~yN~---~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~ 142 (605)
.++|.|.|.|++-+. ..-....||-||++-.||....-+-|-|||.+.-|.....+
T Consensus 364 s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKLacYvSDDGgS~LTf~AL~E 422 (1135)
T PLN02248 364 SDLPGIDVFVSTADPEKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLTFEAMAE 422 (1135)
T ss_pred ccCCcceeEeecCCCccCcchHHHHHHHHHhcccccccceeEEEecCCchHHHHHHHHH
Confidence 359999999999754 44567789999999999998788999999999999766554
No 185
>PF06306 CgtA: Beta-1,4-N-acetylgalactosaminyltransferase (CgtA); InterPro: IPR010446 This family consists of several beta-1,4-N-acetylgalactosaminyltransferase proteins from Campylobacter jejuni [].
Probab=90.50 E-value=1.2 Score=44.84 Aligned_cols=118 Identities=16% Similarity=0.066 Sum_probs=83.5
Q ss_pred cceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEe-------CCCC--C
Q psy10463 199 KSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIR-------SPGR--V 269 (605)
Q Consensus 199 ~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~-------~~~n--~ 269 (605)
..|-.|-+.||+ .+|.++|+|++..- .|.|+.=|.|+|++ ++++.++++++|.-+.+.. ++.. .
T Consensus 88 ~~~~~iRvKnE~-~tl~~si~S~Lpai-----~~gVI~yNdc~D~t-~Eiil~fckkyP~fip~~Ypy~v~~~n~~~~~n 160 (347)
T PF06306_consen 88 NPWAFIRVKNEA-MTLAESIESILPAI-----DEGVIGYNDCTDGT-EEIILEFCKKYPSFIPIKYPYEVIIKNPKSEEN 160 (347)
T ss_pred CcceEEEEcchh-hhHHHHHHHHHHHH-----hccEEEeecCCCCH-HHHHHHHHHhCcccccccCcchhhccCCchhhh
Confidence 478899999999 99999999999533 58888888889885 6789999999985444321 1110 1
Q ss_pred ChHHHHHHHHhhc-cCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeee
Q psy10463 270 GLIKARLLGARQA-EGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDII 323 (605)
Q Consensus 270 G~~~arN~G~~~A-~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i 323 (605)
-+..=.|.++... +.+|++=+|+|-+..+.-|-...=...+....+..+.|+..
T Consensus 161 ~l~~YYNy~ls~ipk~~w~iKID~DhIy~~~KL~ksfY~pk~~~~~v~YsRINF~ 215 (347)
T PF06306_consen 161 SLYNYYNYVLSFIPKNEWAIKIDADHIYDTKKLYKSFYIPKNDYDVVSYSRINFH 215 (347)
T ss_pred hhhhhhhhhhcccccceEEEEeccceeecHHHHhhhheeeccccceEEecceeEE
Confidence 1333356666663 68999999999998887664444444555567777877643
No 186
>cd00218 GlcAT-I Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43).
Probab=90.40 E-value=1.9 Score=41.55 Aligned_cols=98 Identities=17% Similarity=0.255 Sum_probs=61.4
Q ss_pred CcceEEEEeechhh--HHHHHHHHHHHhcCCCCCceeEEEeeCCC-ChHHHHHHHHHHHHHCCCCEEEEeCCCC------
Q psy10463 198 PKSSIVIVFHNEAW--SALLRTVHSVISRSPRSMLKEILLVDDAS-TREFLKSSLDEYVAKLSVPTRVIRSPGR------ 268 (605)
Q Consensus 198 p~vSVIIp~~n~~~--~~l~~~l~sl~~q~~~~~~~eIIvVDd~S-~d~~~~~~l~~~~~~~~~~v~~i~~~~n------ 268 (605)
|.+-||-|||.+.. ..|.+.-+.+. .-+ + .--|||+|+. ..+. ..++.++.+...+.+..+.+
T Consensus 1 p~i~vVTPTy~R~~Q~~~LtRLa~TL~-lVp-~--l~WIVVEd~~~~t~~----va~lL~~sgl~y~HL~~~~~~~~~~~ 72 (223)
T cd00218 1 PTIYVVTPTYARPVQKAELTRLAHTLR-LVP-P--LHWIVVEDSEEKTPL----VAELLRRSGLMYTHLNAKTPSDPTWL 72 (223)
T ss_pred CeEEEECCCCccchhhHHHHHHHHHHh-cCC-c--eEEEEEeCCCCCCHH----HHHHHHHcCCceEEeccCCCCCcccC
Confidence 45678889999872 23444444443 333 3 5789999987 3332 44555665545555544432
Q ss_pred --CChHHHHHHHHhhc-------cCCEEEEecCCcccCcChHHHH
Q psy10463 269 --VGLIKARLLGARQA-------EGEILVFLDAHCECTLGWLENL 304 (605)
Q Consensus 269 --~G~~~arN~G~~~A-------~gd~i~flD~D~~~~~~~L~~l 304 (605)
.| ...||.|++.- ..-++.|.|+|...+-..+++|
T Consensus 73 ~~rg-~~qRn~AL~~ir~~~~~~~~GVVyFADDdN~Ysl~lF~em 116 (223)
T cd00218 73 KPRG-VEQRNLALRWIREHLSAKLDGVVYFADDDNTYDLELFEEM 116 (223)
T ss_pred Cccc-HHHHHHHHHHHHhccccCcceEEEEccCCCcccHHHHHHH
Confidence 33 45699998654 3358999999998877666663
No 187
>PF00483 NTP_transferase: Nucleotidyl transferase This Prosite entry is only a sub-family of the Pfam entry.; InterPro: IPR005835 Nucleotidyl transferases transfer nucleotides from one compound to another. This domain is found in a number of enzymes that transfer nucleotides onto phosphosugars.; GO: 0016779 nucleotidyltransferase activity, 0009058 biosynthetic process; PDB: 1YP2_C 1YP4_D 1YP3_B 1H5S_D 1H5R_C 1H5T_C 2E3D_B 1JYL_C 1JYK_A 1MP5_C ....
Probab=90.38 E-value=2.7 Score=41.32 Aligned_cols=100 Identities=17% Similarity=0.149 Sum_probs=67.1
Q ss_pred EEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCC---CCEEEEeCCCCCChHHHHHHHHh
Q psy10463 204 IVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLS---VPTRVIRSPGRVGLIKARLLGAR 280 (605)
Q Consensus 204 Ip~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~---~~v~~i~~~~n~G~~~arN~G~~ 280 (605)
+|..+.. +.+...|+.+.+... .++|+|-.+..... +.++..... .++.++..+...|.+.|.-.+..
T Consensus 25 l~i~g~~-pli~~~l~~l~~~g~----~~ii~V~~~~~~~~----i~~~~~~~~~~~~~i~~i~~~~~~Gta~al~~a~~ 95 (248)
T PF00483_consen 25 LPIGGKY-PLIDYVLENLANAGI----KEIIVVVNGYKEEQ----IEEHLGSGYKFGVKIEYIVQPEPLGTAGALLQALD 95 (248)
T ss_dssp SEETTEE-EHHHHHHHHHHHTTC----SEEEEEEETTTHHH----HHHHHTTSGGGTEEEEEEEESSSSCHHHHHHHTHH
T ss_pred ceecCCC-cchhhhhhhhcccCC----ceEEEEEeeccccc----ccccccccccccccceeeecccccchhHHHHHHHH
Confidence 3455664 577777777776433 47555544443332 444444332 24888888888999999999988
Q ss_pred hccCCE----EEEecCCcccCcChHHHHHHHHHcCCc
Q psy10463 281 QAEGEI----LVFLDAHCECTLGWLENLVARVAEDRT 313 (605)
Q Consensus 281 ~A~gd~----i~flD~D~~~~~~~L~~ll~~~~~~~~ 313 (605)
....+. ++++.+|..... -+..+++...+...
T Consensus 96 ~i~~~~~~~~~lv~~gD~i~~~-~~~~~l~~~~~~~~ 131 (248)
T PF00483_consen 96 FIEEEDDDEDFLVLNGDIIFDD-DLQDMLEFHRESNA 131 (248)
T ss_dssp HHTTSEE-SEEEEETTEEEEST-THHHHHHHHHHHSS
T ss_pred HhhhccccceEEEEeccccccc-hhhhHHHhhhcccc
Confidence 887765 899999998877 56777777665444
No 188
>TIGR00466 kdsB 3-deoxy-D-manno-octulosonate cytidylyltransferase.
Probab=90.34 E-value=18 Score=35.59 Aligned_cols=183 Identities=13% Similarity=0.109 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeC--CCCCChHHHHHHHHhh---ccCCE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRS--PGRVGLIKARLLGARQ---AEGEI 286 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~--~~n~G~~~arN~G~~~---A~gd~ 286 (605)
+.+..+++.+... .. .+|+|+-| ++. +.+..+.++ ++++.. ....|..+.. .+++. ...++
T Consensus 25 Pli~~~le~~~~~-~~---d~VvVvt~---~~~----i~~~~~~~g--~~~v~~~~~~~~Gt~r~~-~~~~~l~~~~~d~ 90 (238)
T TIGR00466 25 PMIVHVAENANES-GA---DRCIVATD---DES----VAQTCQKFG--IEVCMTSKHHNSGTERLA-EVVEKLALKDDER 90 (238)
T ss_pred CHHHHHHHHHHhC-CC---CeEEEEeC---HHH----HHHHHHHcC--CEEEEeCCCCCChhHHHH-HHHHHhCCCCCCE
Confidence 5677777776543 22 47777643 222 233344443 444432 2333432222 22222 25689
Q ss_pred EEEecCCcc-cCcChHHHHHHHHHcCCcEEEeeeEeeec------CCeeEEecccccceeeeeccceeeEeec--CchhH
Q psy10463 287 LVFLDAHCE-CTLGWLENLVARVAEDRTRVVCPVIDIIS------DVTFAYVRSFELHWGAFNWELHFRWYTY--GSSDA 357 (605)
Q Consensus 287 i~flD~D~~-~~~~~L~~ll~~~~~~~~~vv~p~i~~i~------~~~~~~~~~~~~~~g~~~~~l~~~~~~~--~~~~~ 357 (605)
++++|+|.- ++++.++.+++.+.+....++++.+...+ +++....... .|. .+.|..... .....
T Consensus 91 Vli~~gD~Pli~~~~I~~li~~~~~~~~~~a~~~~~~~d~~~~~~p~~vk~v~~~---~g~---alyfsr~~ip~~R~~~ 164 (238)
T TIGR00466 91 IVNLQGDEPFIPKEIIRQVADNLATKNVPMAALAVKIHDAEEAFNPNAVKVVLDS---QGY---ALYFSRSLIPFDRDFF 164 (238)
T ss_pred EEEEcCCcCcCCHHHHHHHHHHHhcCCCCEEEEeeecCCHHHccCCCceEEEeCC---CCe---EEEecCCCCCCCCCcc
Confidence 999999997 69999999999986544444444443333 2232222100 010 000100000 00000
Q ss_pred hhhccCCCCcccc-ccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEec
Q psy10463 358 IIKRKDFTEPFKT-PAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAP 420 (605)
Q Consensus 358 ~~~~~~~~~~~~~-~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p 420 (605)
. ....|... -...-|..+++++++.+.-...+...- -.|.+|. +|+...|++|.+..
T Consensus 165 ~----~~~tpq~~~~~~h~Giy~~~~~~L~~~~~~~~~~le-~~e~leq-lr~le~g~~i~~~~ 222 (238)
T TIGR00466 165 A----KRQTPVGDNLLRHIGIYGYRAGFIEEYVAWKPCVLE-EIEKLEQ-LRVLYYGEKIHVKI 222 (238)
T ss_pred c----ccccccccceeEEEEEEeCCHHHHHHHHhCCCCccc-ccchhHH-HhhhhcCCceEEEE
Confidence 0 00011100 012347889999999997766554322 3688886 89999999997764
No 189
>PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B ....
Probab=90.26 E-value=1.8 Score=39.36 Aligned_cols=95 Identities=19% Similarity=0.318 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCC-CCCChHHHHHHHHhhc-cCCEEEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSP-GRVGLIKARLLGARQA-EGEILVF 289 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~-~n~G~~~arN~G~~~A-~gd~i~f 289 (605)
+.+..+++.+.+... .+|+||-.. +. +....... +++++.++ ...|...+.-.|+... ..+.+++
T Consensus 25 ~li~~~l~~l~~~~~----~~Ivvv~~~--~~-----~~~~~~~~--~~~~v~~~~~~~G~~~sl~~a~~~~~~~~~vlv 91 (160)
T PF12804_consen 25 PLIERVLEALREAGV----DDIVVVTGE--EE-----IYEYLERY--GIKVVVDPEPGQGPLASLLAALSQLPSSEPVLV 91 (160)
T ss_dssp EHHHHHHHHHHHHTE----SEEEEEEST--HH-----HHHHHTTT--TSEEEE-STSSCSHHHHHHHHHHTSTTSSEEEE
T ss_pred cHHHHHHHHhhccCC----ceEEEecCh--HH-----HHHHHhcc--CceEEEeccccCChHHHHHHHHHhcccCCCcEE
Confidence 577777777765532 378887554 22 22223332 57877775 3589999999999998 8999999
Q ss_pred ecCCcc-cCcChHHHHHHHHHcCCcEEEeee
Q psy10463 290 LDAHCE-CTLGWLENLVARVAEDRTRVVCPV 319 (605)
Q Consensus 290 lD~D~~-~~~~~L~~ll~~~~~~~~~vv~p~ 319 (605)
+..|.. ++++.++.+++.+.+++..++.+.
T Consensus 92 ~~~D~p~~~~~~l~~l~~~~~~~~~~i~~~~ 122 (160)
T PF12804_consen 92 LPCDQPFLSPELLRRLLEALEKSPADIVVPV 122 (160)
T ss_dssp EETTETTS-HHHHHHHHHHHHHTTTSEEEEE
T ss_pred EeCCccccCHHHHHHHHHHHhccCCcEEEEE
Confidence 999995 599999999999987666665544
No 190
>cd06425 M1P_guanylylT_B_like_N N-terminal domain of the M1P-guanylyltransferase B-isoform like proteins. GDP-mannose pyrophosphorylase (GTP: alpha-d-mannose-1-phosphate guanyltransferase) catalyzes the formation of GDP-d-mannose from GTP and alpha-d-mannose-1-Phosphate. It contains an N-terminal catalytic domain and a C-terminal Lefthanded-beta-Helix fold domain. GDP-d-mannose is the activated form of mannose for formation of cell wall lipoarabinomannan and various mannose-containing glycolipids and polysaccharides. The function of GDP-mannose pyrophosphorylase is essential for cell wall integrity, morphogenesis and viability. Repression of GDP-mannose pyrophosphorylase in yeast leads to phenotypes, such as cell lysis, defective cell wall, and failure of polarized growth and cell separation.
Probab=89.78 E-value=8.8 Score=37.44 Aligned_cols=96 Identities=18% Similarity=0.218 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhccC--CEEEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEG--EILVF 289 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~g--d~i~f 289 (605)
+.+...+.++.+..- .+|+||-.... +.+.+.+.++....+..+.+.......|.+.+...+...... +-+++
T Consensus 32 pli~~~l~~l~~~g~----~~v~iv~~~~~-~~~~~~l~~~~~~~~~~i~~~~~~~~~G~~~al~~a~~~~~~~~~~~lv 106 (233)
T cd06425 32 PMIEHQIEALAKAGV----KEIILAVNYRP-EDMVPFLKEYEKKLGIKITFSIETEPLGTAGPLALARDLLGDDDEPFFV 106 (233)
T ss_pred chHHHHHHHHHHCCC----cEEEEEeeeCH-HHHHHHHhcccccCCeEEEeccCCCCCccHHHHHHHHHHhccCCCCEEE
Confidence 577778888776532 36666544322 223333333322222223333345567888888877776543 33566
Q ss_pred ecCCcccCcChHHHHHHHHHcCCc
Q psy10463 290 LDAHCECTLGWLENLVARVAEDRT 313 (605)
Q Consensus 290 lD~D~~~~~~~L~~ll~~~~~~~~ 313 (605)
+++|.....+ +..+++...+...
T Consensus 107 ~~~D~~~~~~-~~~~~~~~~~~~~ 129 (233)
T cd06425 107 LNSDVICDFP-LAELLDFHKKHGA 129 (233)
T ss_pred EeCCEeeCCC-HHHHHHHHHHcCC
Confidence 6899887766 5888887765544
No 191
>PF05060 MGAT2: N-acetylglucosaminyltransferase II (MGAT2); InterPro: IPR007754 N-acetylglucosaminyltransferase II (2.4.1.143 from EC) is a Golgi resident enzyme that catalyzes an essential step in the biosynthetic pathway leading from high mannose to complex N-linked oligosaccharides []. Mutations in the MGAT2 gene lead to a congenital disorder of glycosylation (CDG IIa). CDG IIa patients have an increased bleeding tendency, unrelated to coagulation factors []. Synonym(s): UDP-N-acetyl-D-glucosamine:alpha-6-D-mannoside beta-1,2-N- acetylglucosaminyltransferase II, GnT II/MGAT2.; GO: 0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0009312 oligosaccharide biosynthetic process, 0005795 Golgi stack, 0016021 integral to membrane
Probab=89.70 E-value=6.6 Score=40.75 Aligned_cols=55 Identities=15% Similarity=0.146 Sum_probs=36.7
Q ss_pred ceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHH-----cCCeEEEecceEEEEEcc
Q psy10463 375 GGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQ-----CGGSIEIAPCSHVAHLFR 429 (605)
Q Consensus 375 G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~-----~G~~i~~~p~s~v~H~~r 429 (605)
.-.|++.|++|.+|-..-+.|=-|.--++|+++-... ...++.+.-.++|.|+..
T Consensus 233 NmGmAfNRs~W~kI~~ca~~FC~yDDYNWDwSL~~ls~~cl~~~~kvL~~~~PRV~HiGd 292 (356)
T PF05060_consen 233 NMGMAFNRSTWNKIKSCADEFCTYDDYNWDWSLQHLSQRCLPSPLKVLVPKGPRVFHIGD 292 (356)
T ss_pred cceeEecHHHHHHHHHHHHHhCCCCCCCchHHHHHHHhhccCCccEEEEEccCcEEEccc
Confidence 3468999999999976655554443445666665332 245566667788999853
No 192
>COG1213 Predicted sugar nucleotidyltransferases [Cell envelope biogenesis, outer membrane]
Probab=89.39 E-value=1.1 Score=43.40 Aligned_cols=88 Identities=14% Similarity=0.261 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCC--CCChHHHHHHHHhhccCCEEEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG--RVGLIKARLLGARQAEGEILVF 289 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~--n~G~~~arN~G~~~A~gd~i~f 289 (605)
+.+.++|+++....- .|+++|-+|-.. +.++++.++++...+++.++. ..+-....-.|.....++ ++.
T Consensus 32 ~ii~~~i~~L~~~gi----~e~vvV~~g~~~----~lve~~l~~~~~~~~iv~N~~y~ktN~~~Sl~~akd~~~~~-fii 102 (239)
T COG1213 32 EIIYRTIENLAKAGI----TEFVVVTNGYRA----DLVEEFLKKYPFNAKIVINSDYEKTNTGYSLLLAKDYMDGR-FIL 102 (239)
T ss_pred EeHHHHHHHHHHcCC----ceEEEEeccchH----HHHHHHHhcCCcceEEEeCCCcccCCceeEEeeehhhhcCc-EEE
Confidence 568889998887653 489999777543 367888888887888888765 122233345666777777 677
Q ss_pred ecCCcccCcChHHHHHHHH
Q psy10463 290 LDAHCECTLGWLENLVARV 308 (605)
Q Consensus 290 lD~D~~~~~~~L~~ll~~~ 308 (605)
+++|...+|..++.++++-
T Consensus 103 ~~sD~vye~~~~e~l~~a~ 121 (239)
T COG1213 103 VMSDHVYEPSILERLLEAP 121 (239)
T ss_pred EeCCEeecHHHHHHHHhCc
Confidence 8999999999999998865
No 193
>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional
Probab=89.14 E-value=11 Score=38.95 Aligned_cols=94 Identities=19% Similarity=0.286 Sum_probs=59.1
Q ss_pred CCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCc---hhh--HHHHHHHHHHhcCCCeEEeecCC----
Q psy10463 89 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDAST---REF--LKSSLDEYVAKLSVPTRVIRSPG---- 159 (605)
Q Consensus 89 ~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~---d~~--~~~~~~~~~~~~~~~v~~~~~~~---- 159 (605)
+-...||||+.||... .|+-||.--|.+ --||||-+.+. |.- -.+.+..+..-....+.++++..
T Consensus 50 ~~~mAIVVP~KdE~l~----lleGVL~gIPh~--c~iIvVSNS~r~~~d~f~~E~dlv~~f~~~t~r~~i~vHQkDp~la 123 (393)
T PRK14503 50 LGRMAIVVPVKNERLK----LLEGVLKGIPHE--CPIIVVSNSKREPPDRFKLEVDLVRHFYRLTQRPIIIVHQKDPGLA 123 (393)
T ss_pred HhCcEEEEEcCCCchh----HHhhHhhcCCCC--CeEEEEeCCCCCCchHHHHHHHHHHHHHhhhcCceEEEEcCCHHHH
Confidence 4568999999999954 445555554443 36777777765 321 12233344333334455554432
Q ss_pred ------------------CcchHHHHHHHhhhc---cCceEEEecCcccc
Q psy10463 160 ------------------RVGLIKARLLGARQA---EGEILVFLDAHCEC 188 (605)
Q Consensus 160 ------------------~~G~~~a~n~g~~~a---~g~~i~~lD~d~~~ 188 (605)
+.|++-+...|+..| ..+|+-|+|+|..+
T Consensus 124 ~Af~~aGyp~il~~~g~VR~GKgEGMiiG~lLAk~~g~~YVGFiDADNyi 173 (393)
T PRK14503 124 EALKEAGYPYILDENGLVRSGKGEGMIIGLLLAKALGARYVGFVDADNYI 173 (393)
T ss_pred HHHHHcCChhhhCCCCceecCcchHHHHHHHHHHHhCCCeEeEeecccCC
Confidence 467777777887776 57999999999844
No 194
>PRK05450 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional
Probab=89.01 E-value=17 Score=35.70 Aligned_cols=94 Identities=11% Similarity=0.139 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHh--hccCCEEEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGAR--QAEGEILVF 289 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~--~A~gd~i~f 289 (605)
+.|...+..+... .. .+|+|+-+. +. +.++...++..+.+...+...|.+.+...... ....+.+++
T Consensus 28 pll~~~l~~l~~~-~i---~~ivvv~~~---~~----i~~~~~~~~~~v~~~~~~~~~gt~~~~~~~~~~~~~~~~~vlv 96 (245)
T PRK05450 28 PMIVRVYERASKA-GA---DRVVVATDD---ER----IADAVEAFGGEVVMTSPDHPSGTDRIAEAAAKLGLADDDIVVN 96 (245)
T ss_pred CHHHHHHHHHHhc-CC---CeEEEECCc---HH----HHHHHHHcCCEEEECCCcCCCchHHHHHHHHhcCCCCCCEEEE
Confidence 4667777766654 21 477776431 21 33334444423333233444454443332211 124688999
Q ss_pred ecCCc-ccCcChHHHHHHHHHcCCcEEE
Q psy10463 290 LDAHC-ECTLGWLENLVARVAEDRTRVV 316 (605)
Q Consensus 290 lD~D~-~~~~~~L~~ll~~~~~~~~~vv 316 (605)
+++|. .++++.++.+++....++..++
T Consensus 97 ~~~D~Pli~~~~l~~li~~~~~~~~~~~ 124 (245)
T PRK05450 97 VQGDEPLIPPEIIDQVAEPLANPEADMA 124 (245)
T ss_pred ecCCCCCCCHHHHHHHHHHHhcCCCCeE
Confidence 99999 5799999999998876544333
No 195
>cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=88.51 E-value=4.6 Score=37.55 Aligned_cols=97 Identities=21% Similarity=0.280 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCC-CCCChHHHHHHHHhhcc--CCEEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSP-GRVGLIKARLLGARQAE--GEILV 288 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~-~n~G~~~arN~G~~~A~--gd~i~ 288 (605)
..+...++.+... .. .+|+||-+.. ... ........ .+.++..+ ...|...+...|++.+. .++++
T Consensus 27 ~li~~~i~~l~~~-~~---~~i~vv~~~~-~~~----~~~~~~~~--~~~~~~~~~~~~G~~~~i~~al~~~~~~~~~vl 95 (186)
T cd04182 27 PLLRHALDAALAA-GL---SRVIVVLGAE-ADA----VRAALAGL--PVVVVINPDWEEGMSSSLAAGLEALPADADAVL 95 (186)
T ss_pred eHHHHHHHHHHhC-CC---CcEEEECCCc-HHH----HHHHhcCC--CeEEEeCCChhhCHHHHHHHHHHhccccCCEEE
Confidence 4666777776654 11 3676664322 111 12222222 35555544 33688888888988876 79999
Q ss_pred EecCCcc-cCcChHHHHHHHHHcCCcEEEeee
Q psy10463 289 FLDAHCE-CTLGWLENLVARVAEDRTRVVCPV 319 (605)
Q Consensus 289 flD~D~~-~~~~~L~~ll~~~~~~~~~vv~p~ 319 (605)
++.+|.. +++..++.+++.+..++..++.|.
T Consensus 96 v~~~D~P~i~~~~i~~l~~~~~~~~~~~v~~~ 127 (186)
T cd04182 96 ILLADQPLVTAETLRALIDAFREDGAGIVAPV 127 (186)
T ss_pred EEeCCCCCCCHHHHHHHHHHHHhCCCeEEEEe
Confidence 9999994 688999999998876555555543
No 196
>PF06306 CgtA: Beta-1,4-N-acetylgalactosaminyltransferase (CgtA); InterPro: IPR010446 This family consists of several beta-1,4-N-acetylgalactosaminyltransferase proteins from Campylobacter jejuni [].
Probab=88.38 E-value=1.3 Score=44.59 Aligned_cols=91 Identities=16% Similarity=0.107 Sum_probs=69.4
Q ss_pred cEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEee-------cCC--Cc
Q psy10463 91 KSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIR-------SPG--RV 161 (605)
Q Consensus 91 ~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~-------~~~--~~ 161 (605)
-.|-.|=+.||+ .+|.++|+|++... .|+||.=+-|+|+| ++++.++.++++.-+.+.. ++. ..
T Consensus 88 ~~~~~iRvKnE~-~tl~~si~S~Lpai-----~~gVI~yNdc~D~t-~Eiil~fckkyP~fip~~Ypy~v~~~n~~~~~n 160 (347)
T PF06306_consen 88 NPWAFIRVKNEA-MTLAESIESILPAI-----DEGVIGYNDCTDGT-EEIILEFCKKYPSFIPIKYPYEVIIKNPKSEEN 160 (347)
T ss_pred CcceEEEEcchh-hhHHHHHHHHHHHH-----hccEEEeecCCCCH-HHHHHHHHHhCcccccccCcchhhccCCchhhh
Confidence 368899999999 99999999999665 78888888889999 7889999999987655422 111 11
Q ss_pred chHHHHHHHhhhc-cCceEEEecCcccc
Q psy10463 162 GLIKARLLGARQA-EGEILVFLDAHCEC 188 (605)
Q Consensus 162 G~~~a~n~g~~~a-~g~~i~~lD~d~~~ 188 (605)
-+..=.|.++..- +.+|++=+|+|-..
T Consensus 161 ~l~~YYNy~ls~ipk~~w~iKID~DhIy 188 (347)
T PF06306_consen 161 SLYNYYNYVLSFIPKNEWAIKIDADHIY 188 (347)
T ss_pred hhhhhhhhhhcccccceEEEEeccceee
Confidence 2344457777774 58999999998743
No 197
>PLN02458 transferase, transferring glycosyl groups
Probab=88.36 E-value=2.8 Score=42.58 Aligned_cols=101 Identities=19% Similarity=0.207 Sum_probs=62.4
Q ss_pred CCcceEEEEeec-hhh--HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCC---
Q psy10463 197 LPKSSIVIVFHN-EAW--SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVG--- 270 (605)
Q Consensus 197 ~p~vSVIIp~~n-~~~--~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G--- 270 (605)
.+.+=||.|||. +.. ..|.+.-+.+ ..-+++ .--|||+|++.-.. ..++.++.+...+.+..+.+..
T Consensus 111 ~rlIivVTPTY~rR~~Q~a~LTRLahTL-~lVp~p--L~WIVVEd~~~t~~----va~lLrrsGl~y~HL~~k~~~~~~~ 183 (346)
T PLN02458 111 RRLVIIVTPISTKDRYQGVLLRRLANTL-RLVPPP--LLWIVVEGQSDSEE----VSEMLRKTGIMYRHLVFKENFTDPE 183 (346)
T ss_pred CceEEEECCCCCCcchhHHHHHHHHHHH-hcCCCC--ceEEEEeCCCCCHH----HHHHHHHcCCceEEeccCCCCCCcc
Confidence 456778889998 331 2344444433 344444 47888988775443 4455666554555555444431
Q ss_pred --hHHHHHHHHhhcc----CCEEEEecCCcccCcChHHHH
Q psy10463 271 --LIKARLLGARQAE----GEILVFLDAHCECTLGWLENL 304 (605)
Q Consensus 271 --~~~arN~G~~~A~----gd~i~flD~D~~~~~~~L~~l 304 (605)
....||.|++.-+ .-+|.|.|+|...+-+.+++|
T Consensus 184 ~r~~~QRN~AL~~IR~h~l~GVVyFADDdNtYsl~LFeEm 223 (346)
T PLN02458 184 AELDHQRNLALRHIEHHKLSGIVHFAGLSNVYDLDFFDEI 223 (346)
T ss_pred chhHHHHHHHHHHHHhcCcCceEEEccCCCcccHHHHHHH
Confidence 2345999987663 468999999988776666553
No 198
>COG1208 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis]
Probab=88.28 E-value=35 Score=35.88 Aligned_cols=96 Identities=16% Similarity=0.200 Sum_probs=70.6
Q ss_pred EEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHH---CCCCEEEEeCCCCCChHHHHHHHHh
Q psy10463 204 IVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAK---LSVPTRVIRSPGRVGLIKARLLGAR 280 (605)
Q Consensus 204 Ip~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~---~~~~v~~i~~~~n~G~~~arN~G~~ 280 (605)
+|.-|.+ .+...|.++.++.- .||+++ -+.. .+.++++... ++.++.++......|-++|.-.+..
T Consensus 27 lpI~gkP--ii~~~l~~L~~~Gv----~eivi~-~~y~----~~~i~~~~~d~~~~~~~I~y~~e~~~lGTag~l~~a~~ 95 (358)
T COG1208 27 LPIAGKP--LIEYVLEALAAAGV----EEIVLV-VGYL----GEQIEEYFGDGEGLGVRITYVVEKEPLGTAGALKNALD 95 (358)
T ss_pred ceeCCcc--HHHHHHHHHHHCCC----cEEEEE-eccc----hHHHHHHHhcccccCCceEEEecCCcCccHHHHHHHHH
Confidence 3444553 67777777766432 477777 3333 3344555543 3458999999999999999888888
Q ss_pred hccCCEEEEecCCcccCcChHHHHHHHHHcC
Q psy10463 281 QAEGEILVFLDAHCECTLGWLENLVARVAED 311 (605)
Q Consensus 281 ~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~ 311 (605)
.-.++-+++++.|...+-+ |..+++..++.
T Consensus 96 ~l~~~~f~v~~GDv~~~~d-l~~l~~~~~~~ 125 (358)
T COG1208 96 LLGGDDFLVLNGDVLTDLD-LSELLEFHKKK 125 (358)
T ss_pred hcCCCcEEEEECCeeeccC-HHHHHHHHHhc
Confidence 8887888899999999988 99999988877
No 199
>TIGR01207 rmlA glucose-1-phosphate thymidylyltransferase, short form. This model describes a tightly conserved but broadly distributed subfamily (here designated as short form) of known and putative bacterial glucose-1-phosphate thymidylyltransferases. It is well characterized in several species as the first of four enzymes involved in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme.
Probab=88.11 E-value=23 Score=35.92 Aligned_cols=101 Identities=14% Similarity=0.185 Sum_probs=59.9
Q ss_pred EEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhc
Q psy10463 203 VIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQA 282 (605)
Q Consensus 203 IIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A 282 (605)
.+|.++.+ .+...|..+..... .+|+||-.....+...+.+.. ...++.++.++..++..|.+.|.-.|...-
T Consensus 24 Llpv~gkP--mI~~~L~~l~~aGi----~~I~iv~~~~~~~~~~~~lg~-g~~~g~~i~~~~q~~~~Gta~al~~a~~~l 96 (286)
T TIGR01207 24 LLPIYDKP--MIYYPLSTLMLAGI----RDILIISTPQDTPRFQQLLGD-GSQWGVNLSYAVQPSPDGLAQAFIIGEDFI 96 (286)
T ss_pred eeEECCEE--hHHHHHHHHHHCCC----CEEEEEecCCcHHHHHHHhcc-ccccCceEEEEEccCCCCHHHHHHHHHHHh
Confidence 56777764 66667776665432 477766432222222222211 112344677888878899999988888775
Q ss_pred c-CCEEEEecCCcccCcChHHHHHHHHHcC
Q psy10463 283 E-GEILVFLDAHCECTLGWLENLVARVAED 311 (605)
Q Consensus 283 ~-gd~i~flD~D~~~~~~~L~~ll~~~~~~ 311 (605)
. .++++++ .|..+...-+..+++...+.
T Consensus 97 ~~~~~~li~-gD~i~~~~~l~~ll~~~~~~ 125 (286)
T TIGR01207 97 GGDPSALVL-GDNIFYGHDLSDLLKRAAAR 125 (286)
T ss_pred CCCCEEEEE-CCEeccccCHHHHHHHHHhc
Confidence 4 4566555 66555555677888766543
No 200
>cd06428 M1P_guanylylT_A_like_N N-terminal domain of M1P_guanylyl_A_ like proteins are likely to be a isoform of GDP-mannose pyrophosphorylase. N-terminal domain of the M1P-guanylyltransferase A-isoform like proteins: The proteins of this family are likely to be a isoform of GDP-mannose pyrophosphorylase. Their sequences are highly conserved with mannose-1-phosphate guanyltransferase, but generally about 40-60 bases longer. GDP-mannose pyrophosphorylase (GTP: alpha-d-mannose-1-phosphate guanyltransferase) catalyzes the formation of GDP-d-mannose from GTP and alpha-d-mannose-1-Phosphate. It contains an N-terminal catalytic domain that resembles a dinucleotide-binding Rossmann fold and a C-terminal LbH fold domain. GDP-d-mannose is the activated form of mannose for formation of cell wall lipoarabinomannan and various mannose-containing glycolipids and polysaccharides. The function of GDP-mannose pyrophosphorylase is essential for cell wall integrity, morphogenesis and viability. Repre
Probab=87.54 E-value=12 Score=37.14 Aligned_cols=103 Identities=14% Similarity=0.193 Sum_probs=60.2
Q ss_pred EEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhc-
Q psy10463 204 IVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQA- 282 (605)
Q Consensus 204 Ip~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A- 282 (605)
+|+-++ +.|...|.++.+.... .+|+||-.... +.+.+.+.+........+.++...+..|.+.|.-.+...-
T Consensus 26 lpv~g~--plI~~~l~~l~~~~gi---~~i~iv~~~~~-~~i~~~l~~~~~~~~~~i~~~~~~~~~Gt~~al~~a~~~l~ 99 (257)
T cd06428 26 FPVAGK--PMIHHHIEACAKVPDL---KEVLLIGFYPE-SVFSDFISDAQQEFNVPIRYLQEYKPLGTAGGLYHFRDQIL 99 (257)
T ss_pred CeECCe--eHHHHHHHHHHhcCCC---cEEEEEecCCH-HHHHHHHHhcccccCceEEEecCCccCCcHHHHHHHHHHhh
Confidence 444454 4677777777653222 37777754332 2233333322222233466666666788887766555442
Q ss_pred --cCCEEEEecCCcccCcChHHHHHHHHHcCCc
Q psy10463 283 --EGEILVFLDAHCECTLGWLENLVARVAEDRT 313 (605)
Q Consensus 283 --~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~ 313 (605)
..+.++++.+|.....+ +..+++...+...
T Consensus 100 ~~~~~~~lv~~gD~~~~~d-l~~~~~~h~~~~~ 131 (257)
T cd06428 100 AGNPSAFFVLNADVCCDFP-LQELLEFHKKHGA 131 (257)
T ss_pred ccCCCCEEEEcCCeecCCC-HHHHHHHHHHcCC
Confidence 24677889999987665 7888887766543
No 201
>TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family. Members of this protein family are probable accessory proteins for the biosynthesis of enzymes related to xanthine dehydrogenase. Comparative genomics suggests a role in the maturation of selenium-dependent molybdenum hydroxylases, although a tenuous alternative hypothesis is a role for this protein (with a requirement for SelD, the selenium donor protein in the selenocysteine and selenouridine biosynthesis pathways) metabolizing a selenium-containing substrate such as selenate.
Probab=87.43 E-value=5.3 Score=37.34 Aligned_cols=97 Identities=18% Similarity=0.203 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCC-CCChHHHHHHHHh-hccCCEEEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG-RVGLIKARLLGAR-QAEGEILVF 289 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~-n~G~~~arN~G~~-~A~gd~i~f 289 (605)
+.+...++.+.+... .+||||-+...+. ..+.+...+ .+.++..+. ..|...+...|++ ....+.+++
T Consensus 26 pll~~~i~~l~~~~~----~~iivv~~~~~~~----~~~~~~~~~--~v~~v~~~~~~~g~~~si~~~l~~~~~~~~vlv 95 (188)
T TIGR03310 26 TILEHVVDNALRLFF----DEVILVLGHEADE----LVALLANHS--NITLVHNPQYAEGQSSSIKLGLELPVQSDGYLF 95 (188)
T ss_pred eHHHHHHHHHHHcCC----CcEEEEeCCcHHH----HHHHhccCC--CeEEEECcChhcCHHHHHHHHhcCCCCCCEEEE
Confidence 567777777765421 3666653322221 223332222 477766543 3577777777877 456789999
Q ss_pred ecCCcc-cCcChHHHHHHHHHcCCcEEEee
Q psy10463 290 LDAHCE-CTLGWLENLVARVAEDRTRVVCP 318 (605)
Q Consensus 290 lD~D~~-~~~~~L~~ll~~~~~~~~~vv~p 318 (605)
+++|.. +.++.++.+++.+..++..++.|
T Consensus 96 ~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~ 125 (188)
T TIGR03310 96 LLGDQPFVTPDIIQLLLEAFALKNDEIVVP 125 (188)
T ss_pred EeCCcCCCCHHHHHHHHHHHHhCCCcEEEe
Confidence 999985 68999999999877666555554
No 202
>cd02517 CMP-KDO-Synthetase CMP-KDO synthetase catalyzes the activation of KDO which is an essential component of the lipopolysaccharide. CMP-KDO Synthetase: 3-Deoxy-D-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) catalyzes the conversion of CTP and 3-deoxy-D-manno-octulosonate into CMP-3-deoxy-D-manno-octulosonate (CMP-KDO) and pyrophosphate. KDO is an essential component of the lipopolysaccharide found in the outer surface of gram-negative eubacteria. It is also a constituent of the capsular polysaccharides of some gram-negative eubacteria. Its presence in the cell wall polysaccharides of green algae and plant were also discovered. However, they have not been found in yeast and animals. The absence of the enzyme in mammalian cells makes it an attractive target molecule for drug design.
Probab=86.88 E-value=27 Score=34.01 Aligned_cols=87 Identities=14% Similarity=0.207 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCC--CCCChHHHHHHHHhhccC--CEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSP--GRVGLIKARLLGARQAEG--EIL 287 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~--~n~G~~~arN~G~~~A~g--d~i 287 (605)
+.+...++.+...... .+|+|+-+ .+ .+.++...++ ++++... ...|.+.+. .++..... +.+
T Consensus 27 pll~~~l~~l~~~~~i---~~ivvv~~---~~----~i~~~~~~~~--~~~~~~~~~~~~gt~~~~-~~~~~~~~~~d~v 93 (239)
T cd02517 27 PMIQHVYERAKKAKGL---DEVVVATD---DE----RIADAVESFG--GKVVMTSPDHPSGTDRIA-EVAEKLDADDDIV 93 (239)
T ss_pred CHHHHHHHHHHhCCCC---CEEEEECC---cH----HHHHHHHHcC--CEEEEcCcccCchhHHHH-HHHHhcCCCCCEE
Confidence 4667777766654221 47777633 12 2334444443 4554432 234555433 34444444 889
Q ss_pred EEecCCc-ccCcChHHHHHHHHHcC
Q psy10463 288 VFLDAHC-ECTLGWLENLVARVAED 311 (605)
Q Consensus 288 ~flD~D~-~~~~~~L~~ll~~~~~~ 311 (605)
+++++|. .+.+..|..+++.+..+
T Consensus 94 lv~~gD~Pli~~~~l~~l~~~~~~~ 118 (239)
T cd02517 94 VNVQGDEPLIPPEMIDQVVAALKDD 118 (239)
T ss_pred EEecCCCCCCCHHHHHHHHHHHHhC
Confidence 9999999 67899999999988665
No 203
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=85.58 E-value=10 Score=42.95 Aligned_cols=56 Identities=14% Similarity=0.063 Sum_probs=44.5
Q ss_pred CCCCEEEEeCCCCCCh-----HHHHHHHHhh----ccCCEEEEecCCccc-CcChHHHHHHHHHcCC
Q psy10463 256 LSVPTRVIRSPGRVGL-----IKARLLGARQ----AEGEILVFLDAHCEC-TLGWLENLVARVAEDR 312 (605)
Q Consensus 256 ~~~~v~~i~~~~n~G~-----~~arN~G~~~----A~gd~i~flD~D~~~-~~~~L~~ll~~~~~~~ 312 (605)
+| .+-++..+++.|+ ++|.|.-++. +.++||+-||.|... ++..+.+.+-.+.+..
T Consensus 165 lP-~lvYvsREKrp~~~Hh~KAGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~~d~~ 230 (720)
T PF03552_consen 165 LP-MLVYVSREKRPGYPHHFKAGAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFFMDPK 230 (720)
T ss_pred CC-eEEEEeccCCCCCCchhhhcccccccccceeecCCCEEEEecccccccchHHHHHHHHhhccCC
Confidence 56 7888988888884 7777776644 479999999999976 7888888888876644
No 204
>cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU. The N-terminal domain of N-Acetylglucosamine-1-phosphate uridyltransferase (GlmU). GlmU is an essential bacterial enzyme with both an acetyltransferase and an uridyltransferase activity which have been mapped to the C-terminal and N-terminal domains, respectively. This family represents the N-terminal uridyltransferase. GlmU performs the last two steps in the synthesis of UDP-N-acetylglucosamine (UDP-GlcNAc), which is an essential precursor in both the peptidoglycan and the lipopolysaccharide metabolic pathways in Gram-positive and Gram-negative bacteria, respectively.
Probab=85.51 E-value=12 Score=36.25 Aligned_cols=92 Identities=14% Similarity=0.098 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhcc--CCEEEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAE--GEILVF 289 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~--gd~i~f 289 (605)
+.+..+++++.+..- .+|++|-.. ..+ .+.++...+ +++++..+...|.+.+.-.|+.... .+.+++
T Consensus 27 pli~~~i~~l~~~~i----~~i~iv~~~-~~~----~i~~~~~~~--~~~~~~~~~~~g~~~ai~~a~~~~~~~~~~vli 95 (229)
T cd02540 27 PMLEHVLDAARALGP----DRIVVVVGH-GAE----QVKKALANP--NVEFVLQEEQLGTGHAVKQALPALKDFEGDVLV 95 (229)
T ss_pred cHHHHHHHHHHhCCC----CeEEEEECC-CHH----HHHHHhCCC--CcEEEECCCCCCCHHHHHHHHHhhccCCCeEEE
Confidence 577788888776431 365555422 222 233444332 5777777777888888888877654 688999
Q ss_pred ecCCc-ccCcChHHHHHHHHHcCCcE
Q psy10463 290 LDAHC-ECTLGWLENLVARVAEDRTR 314 (605)
Q Consensus 290 lD~D~-~~~~~~L~~ll~~~~~~~~~ 314 (605)
+++|. .+.+..+..+++...+....
T Consensus 96 ~~~D~p~~~~~~i~~l~~~~~~~~~~ 121 (229)
T cd02540 96 LYGDVPLITPETLQRLLEAHREAGAD 121 (229)
T ss_pred EeCCccccCHHHHHHHHHHHHhcCCc
Confidence 99998 46788999999888765443
No 205
>KOG1476|consensus
Probab=85.17 E-value=6.7 Score=39.55 Aligned_cols=99 Identities=17% Similarity=0.239 Sum_probs=64.0
Q ss_pred CCcceEEEEeechhhH--HHHHHHHHHHhcCCCCCceeEEEeeCCC-ChHHHHHHHHHHHHHCCCCEEEEeCCCCCChH-
Q psy10463 197 LPKSSIVIVFHNEAWS--ALLRTVHSVISRSPRSMLKEILLVDDAS-TREFLKSSLDEYVAKLSVPTRVIRSPGRVGLI- 272 (605)
Q Consensus 197 ~p~vSVIIp~~n~~~~--~l~~~l~sl~~q~~~~~~~eIIvVDd~S-~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~- 272 (605)
.|.|-||-|||.+... .|.+ +..-+.+-+ + .--|||+||+ ..+. ...+.++.+...+++..+.+.+..
T Consensus 86 ~~~iivVTPTY~R~~q~~~LtR-lanTL~~V~-n--LhWIVVEd~~~~~p~----v~~~L~rtgl~ythl~~~t~~~~~~ 157 (330)
T KOG1476|consen 86 LPTIIVVTPTYVRPVQAAELTR-LANTLRLVP-N--LHWIVVEDGEGTTPE----VSGILRRTGLPYTHLVHKTPMGYKA 157 (330)
T ss_pred CccEEEEcccccchhHHHHHHH-HHHHHhhcC-C--eeEEEEecCCCCCHH----HHHHHHHcCCceEEEeccCCCCCcc
Confidence 6888999999999822 2222 333333444 4 4789999984 3333 345556655556666666656543
Q ss_pred ----HHHHHHHhhcc---------CCEEEEecCCcccCcChHHH
Q psy10463 273 ----KARLLGARQAE---------GEILVFLDAHCECTLGWLEN 303 (605)
Q Consensus 273 ----~arN~G~~~A~---------gd~i~flD~D~~~~~~~L~~ 303 (605)
..||.|++.-+ .-++.|-|+|...+-..+++
T Consensus 158 ~rg~~qRn~aL~~ir~~~~~~~~~~GVVyFADDdN~YdleLF~e 201 (330)
T KOG1476|consen 158 RRGWEQRNMALRWIRSRILRHHKLEGVVYFADDDNTYDLELFEE 201 (330)
T ss_pred ccchhHHHHHHHHHHHhcccccccceEEEEccCCcchhHHHHHH
Confidence 45898876543 45889999998887766666
No 206
>PRK00317 mobA molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed
Probab=84.83 E-value=5.3 Score=37.73 Aligned_cols=88 Identities=17% Similarity=0.239 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCC--CCChHHHHHHHHhhccCCEEEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG--RVGLIKARLLGARQAEGEILVF 289 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~--n~G~~~arN~G~~~A~gd~i~f 289 (605)
..+..+++.+. . . ..+|+||-+.. .. .+ ... .++++.... ..|...+...|++....+++++
T Consensus 31 ~ll~~~i~~l~--~--~-~~~i~vv~~~~-~~-------~~-~~~--~~~~v~~~~~~~~g~~~~i~~~l~~~~~~~vlv 94 (193)
T PRK00317 31 PLIQHVIERLA--P--Q-VDEIVINANRN-LA-------RY-AAF--GLPVIPDSLADFPGPLAGILAGLKQARTEWVLV 94 (193)
T ss_pred EHHHHHHHHHh--h--h-CCEEEEECCCC-hH-------HH-Hhc--CCcEEeCCCCCCCCCHHHHHHHHHhcCCCeEEE
Confidence 56677777665 1 1 24777773321 11 11 122 345555432 3677778888888878899999
Q ss_pred ecCCcc-cCcChHHHHHHHHHcCCcEE
Q psy10463 290 LDAHCE-CTLGWLENLVARVAEDRTRV 315 (605)
Q Consensus 290 lD~D~~-~~~~~L~~ll~~~~~~~~~v 315 (605)
+++|.- ++++.++.+++.+.++...+
T Consensus 95 ~~~D~P~i~~~~i~~l~~~~~~~~~~~ 121 (193)
T PRK00317 95 VPCDTPFIPPDLVARLAQAAGKDDADV 121 (193)
T ss_pred EcCCcCCCCHHHHHHHHHhhhcCCCcE
Confidence 999995 59999999999876554433
No 207
>cd02509 GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransferase catalyzes the formation of GDP-Mannose. GDP-mannose-1-phosphate guanylyltransferase, also called GDP-mannose pyrophosphorylase (GDP-MP), catalyzes the formation of GDP-Mannose from mannose-1-phosphate and GTP. Mannose is a key monosaccharide for glycosylation of proteins and lipids. GDP-Mannose is the activated donor for mannosylation of various biomolecules. This enzyme is known to be bifunctional, as both mannose-6-phosphate isomerase and mannose-1-phosphate guanylyltransferase. This CD covers the N-terminal GDP-mannose-1-phosphate guanylyltransferase domain, whereas the isomerase function is located at the C-terminal half. GDP-MP is a member of the nucleotidyltransferase family of enzymes.
Probab=84.34 E-value=48 Score=33.31 Aligned_cols=86 Identities=19% Similarity=0.180 Sum_probs=53.7
Q ss_pred EEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhcc
Q psy10463 204 IVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAE 283 (605)
Q Consensus 204 Ip~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~ 283 (605)
+|..++. +.+..++..+...... .+|+||-+..... .++++.......+.++..+...|-+.|.-.++....
T Consensus 27 l~l~g~~-~li~~~l~~l~~~~~~---~~i~vvt~~~~~~----~v~~~l~~~~~~~~ii~ep~~~gTa~ai~~a~~~~~ 98 (274)
T cd02509 27 LKLFGDK-SLLQQTLDRLKGLVPP---DRILVVTNEEYRF----LVREQLPEGLPEENIILEPEGRNTAPAIALAALYLA 98 (274)
T ss_pred eEcCCCC-cHHHHHHHHHhcCCCC---CcEEEEechHHHH----HHHHHHhhcCCCceEEECCCCCCcHHHHHHHHHHHH
Confidence 4555544 6788888877654322 3777775422112 233333331226788888877888888777765543
Q ss_pred ----CCEEEEecCCcccC
Q psy10463 284 ----GEILVFLDAHCECT 297 (605)
Q Consensus 284 ----gd~i~flD~D~~~~ 297 (605)
.++++++.+|..+.
T Consensus 99 ~~~~~~~vlVl~~D~~i~ 116 (274)
T cd02509 99 KRDPDAVLLVLPSDHLIE 116 (274)
T ss_pred hcCCCCeEEEecchhccc
Confidence 57899999998775
No 208
>PLN03180 reversibly glycosylated polypeptide; Provisional
Probab=83.81 E-value=1.9 Score=43.89 Aligned_cols=30 Identities=13% Similarity=0.129 Sum_probs=26.2
Q ss_pred hHHHHHHHHhhccCCEEEEecCCcccCcCh
Q psy10463 271 LIKARLLGARQAEGEILVFLDAHCECTLGW 300 (605)
Q Consensus 271 ~~~arN~G~~~A~gd~i~flD~D~~~~~~~ 300 (605)
-.+.||.|.-.++.+|++++|+||.+..+|
T Consensus 81 ~~a~R~fGyL~s~~~yivsiDDD~~Pa~d~ 110 (346)
T PLN03180 81 DSACRCFGYLVSKKKYIFTIDDDCFVAKDP 110 (346)
T ss_pred cccchhhhheeecceEEEEECCCCCCCCCC
Confidence 356799999999999999999999997774
No 209
>cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars. Nucleotidyltransferases transfer nucleotides onto phosphosugars. The enzyme family includes Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase. The products are activated sugars that are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides.
Probab=82.19 E-value=24 Score=33.58 Aligned_cols=94 Identities=14% Similarity=0.101 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhccCCEEEEec
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLD 291 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~gd~i~flD 291 (605)
+.+..++.++.+... .+|+||-+...+ .+.+.+.+.. ..+..+.++..+...|.+.+...+......+.+++++
T Consensus 30 pli~~~l~~l~~~g~----~~i~vv~~~~~~-~i~~~~~~~~-~~~~~i~~~~~~~~~g~~~al~~~~~~~~~~~~lv~~ 103 (217)
T cd04181 30 PILEYIIERLARAGI----DEIILVVGYLGE-QIEEYFGDGS-KFGVNIEYVVQEEPLGTAGAVRNAEDFLGDDDFLVVN 103 (217)
T ss_pred eHHHHHHHHHHHCCC----CEEEEEeccCHH-HHHHHHcChh-hcCceEEEEeCCCCCccHHHHHHhhhhcCCCCEEEEE
Confidence 567777777766431 467776544322 2222222111 0223577777766688888888888877778899999
Q ss_pred CCcccCcChHHHHHHHHHcCC
Q psy10463 292 AHCECTLGWLENLVARVAEDR 312 (605)
Q Consensus 292 ~D~~~~~~~L~~ll~~~~~~~ 312 (605)
+|.....+ +..+++...+..
T Consensus 104 ~D~~~~~~-~~~~~~~~~~~~ 123 (217)
T cd04181 104 GDVLTDLD-LSELLRFHREKG 123 (217)
T ss_pred CCeecCcC-HHHHHHHHHhcC
Confidence 99988777 455555554433
No 210
>PF03498 CDtoxinA: Cytolethal distending toxin A/C family; InterPro: IPR003558 Escherichia coli, Haemophilus spp and Campylobacter spp. all produce a toxin that is seen to cause distension in certain cell lines [, ], which eventually disintegrate and die. This novel toxin, termed cytolethal distending toxin (cdt), has three subunits: A, B and C. Their sizes are approx. 27.7, 29.5 and 19.9kDa respectively [], and they appear to be entirely novel []. Further research on the complete toxin has revealed that it blocks the cell cycle at stage G2, through inactivation of the cyclin-dependent kinase Cdk1, and without induction of DNA breaks. This leads to multipolar abortive mitosis and micronucleation, associated with centrosomal amplification []. The roles of each subunit are unclear, but it is believed that they have separate roles in pathogenicity. This entry represents the A and C subunits.; GO: 0009405 pathogenesis; PDB: 2F2F_A 1SR4_C.
Probab=81.98 E-value=1.4 Score=39.94 Aligned_cols=82 Identities=18% Similarity=0.286 Sum_probs=44.5
Q ss_pred ccccccccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEec-CCc--eeec-CCCeeeecCCCCCC-CCCceE
Q psy10463 514 FGRIRHVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKL-PTD--LIAT-DESVCLDVPEYEND-ISPRVR 588 (605)
Q Consensus 514 ~G~ir~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~-~~g--~i~~-~~~~CLd~~~~~~~-~g~~v~ 588 (605)
+=+++|..++.||.+... +.+..-.| ......|.|.+-. ..| +|+. .++.||.+...... ....+.
T Consensus 53 ~Vqf~n~~~~~CL~~~~~--------G~~~~~~C-~~~~~~q~F~iiPtttgAVQIks~~~~~Cl~~~~~~~~~~~~~i~ 123 (150)
T PF03498_consen 53 YVQFVNPKTGTCLAAYGN--------GVFHYKSC-DQDNLEQVFSIIPTTTGAVQIKSLSTGECLQTFNNSRTPIYYSIG 123 (150)
T ss_dssp EEEEEETTTSEEEEEETT--------CEEEE--T-TTCHGHH-EEEEEBTTS-EEEEETTT--EEEE-STTSS-SSEEEE
T ss_pred EEEEEcCCCCcceeecCC--------CeEeeccc-CCCChhceEEEEEcCCCcEEEEecCCCceEEecCCCceeEEeeEE
Confidence 336778788889998432 33344449 4434579997631 444 5664 46799998764321 123788
Q ss_pred EEeCCCCC----CcceEeCC
Q psy10463 589 ILACSGFN----RQRWTYDK 604 (605)
Q Consensus 589 l~~C~~~~----~Q~W~~~~ 604 (605)
+.+|+... .|+|.+..
T Consensus 124 l~~Cd~~~~~~l~~lw~itP 143 (150)
T PF03498_consen 124 LTPCDKSKEINLDQLWFITP 143 (150)
T ss_dssp EE---S-EEETGGGEEEEE-
T ss_pred eeeCCCcCCCCHHHcEEEcC
Confidence 99994432 79998753
No 211
>TIGR03202 pucB xanthine dehydrogenase accessory protein pucB. In Bacillus subtilis the expression of this protein, located in an operon with the structural subunits of xanthine dehydrogenase, has been found to be essential for XDH activity. Some members of this family appear to have a distant relationship to the MobA protein involved in molybdopterin biosynthesis, although this may be coincidental.
Probab=81.54 E-value=20 Score=33.64 Aligned_cols=99 Identities=18% Similarity=0.176 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCC-CCChHHHHHHHHhhc---cCCEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG-RVGLIKARLLGARQA---EGEIL 287 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~-n~G~~~arN~G~~~A---~gd~i 287 (605)
..+..++..++... ..+|+||-....+. .. .+........ .+.++..+. ..|...+.-.|++++ ..+++
T Consensus 27 ~ll~~~i~~~~~~~----~~~i~vv~~~~~~~-~~-~~~~~~~~~~-~~~~~~~~~~~~G~~~si~~gl~~~~~~~~d~v 99 (190)
T TIGR03202 27 TLGSASLKTALSSR----LSKVIVVIGEKYAH-LS-WLDPYLLADE-RIMLVCCRDACEGQAHSLKCGLRKAEAMGADAV 99 (190)
T ss_pred cHHHHHHHHHHhCC----CCcEEEEeCCccch-hh-hhhHhhhcCC-CeEEEECCChhhhHHHHHHHHHHHhccCCCCeE
Confidence 46666676655422 14777775443221 11 1111111112 456554433 357777888888875 47999
Q ss_pred EEecCCcc-cCcChHHHHHHHHHcCCcEEEe
Q psy10463 288 VFLDAHCE-CTLGWLENLVARVAEDRTRVVC 317 (605)
Q Consensus 288 ~flD~D~~-~~~~~L~~ll~~~~~~~~~vv~ 317 (605)
+++++|.- ++++.++.|++.+...+..++.
T Consensus 100 lv~~~D~P~v~~~~i~~L~~~~~~~~~~~~~ 130 (190)
T TIGR03202 100 VILLADQPFLTADVINALLALAKRRPDDYVA 130 (190)
T ss_pred EEEeCCCCCCCHHHHHHHHHHHhhCCCCEEE
Confidence 99999997 5899999999988765554444
No 212
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=80.17 E-value=40 Score=38.31 Aligned_cols=93 Identities=18% Similarity=0.304 Sum_probs=58.7
Q ss_pred CCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCc---hhh--HHHHHHHHHHhcCCCeEEeecCC----
Q psy10463 89 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDAST---REF--LKSSLDEYVAKLSVPTRVIRSPG---- 159 (605)
Q Consensus 89 ~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~---d~~--~~~~~~~~~~~~~~~v~~~~~~~---- 159 (605)
.-...||||+.||.. ..|+-||.--|.+ --||||-+.+. |.- -.+.+..+..-....+-++++..
T Consensus 54 ~~~~aivvp~k~e~~----~~~~gvl~~ip~~--c~ii~vsns~r~~~d~~~~e~~~~~~~~~~~~~~~~~vhq~dp~~a 127 (694)
T PRK14502 54 EKKMAIVLPIKDEDL----KVFEGVLSGIPHD--CLMIVISNSSKQEVDNFKNEKDIVNRFCRITHRQAIVVHQKNPELA 127 (694)
T ss_pred HhCcEEEEEcCCCch----hHHhhHhhcCCCC--CeEEEEeCCCCCchHHHHHHHHHHHHHHHhhcCceEEEEcCCHHHH
Confidence 456899999999994 4445555555443 36777777775 321 12233344333334454444332
Q ss_pred ------------------CcchHHHHHHHhhhc---cCceEEEecCccc
Q psy10463 160 ------------------RVGLIKARLLGARQA---EGEILVFLDAHCE 187 (605)
Q Consensus 160 ------------------~~G~~~a~n~g~~~a---~g~~i~~lD~d~~ 187 (605)
+.|++-+...|+..| ..+|+-|+|+|..
T Consensus 128 ~a~~~~g~~~~~~~~~~vr~gk~egm~~g~~la~~~g~~yvgfidadny 176 (694)
T PRK14502 128 NAIADAGYPELLGEDGLIRSGKAEGMILGIILTMFSGRDYVGFIDTDNY 176 (694)
T ss_pred HHHHHcCChhhhCCCCceecCcchHHHHHHHHHHhcCCceEeEeeccCC
Confidence 567777788887777 4799999999973
No 213
>cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.
Probab=79.57 E-value=14 Score=34.30 Aligned_cols=90 Identities=21% Similarity=0.271 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCC-CCCChHHHHHHHHhhccCCEEEEe
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSP-GRVGLIKARLLGARQAEGEILVFL 290 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~-~n~G~~~arN~G~~~A~gd~i~fl 290 (605)
..+..+++.+... . .+|+||-+..... + ... .++++..+ ...|...+...|++....+.++++
T Consensus 27 ~ll~~~i~~l~~~--~---~~iivv~~~~~~~--------~-~~~--~~~~v~~~~~~~G~~~si~~~l~~~~~~~vlv~ 90 (181)
T cd02503 27 PLLEHVLERLKPL--V---DEVVISANRDQER--------Y-ALL--GVPVIPDEPPGKGPLAGILAALRAAPADWVLVL 90 (181)
T ss_pred EHHHHHHHHHHhh--c---CEEEEECCCChHH--------H-hhc--CCcEeeCCCCCCCCHHHHHHHHHhcCCCeEEEE
Confidence 4666667666543 1 3777774332211 1 112 46667654 357888888999998888999999
Q ss_pred cCCcc-cCcChHHHHHHHHHcCCcEEEee
Q psy10463 291 DAHCE-CTLGWLENLVARVAEDRTRVVCP 318 (605)
Q Consensus 291 D~D~~-~~~~~L~~ll~~~~~~~~~vv~p 318 (605)
.+|.- ++++.++.+++.+ .+...++.|
T Consensus 91 ~~D~P~i~~~~i~~l~~~~-~~~~~~~~~ 118 (181)
T cd02503 91 ACDMPFLPPELLERLLAAA-EEGADAVVP 118 (181)
T ss_pred eCCcCCCCHHHHHHHHHhh-ccCCCEEEE
Confidence 99996 5899999999987 333344443
No 214
>cd02513 CMP-NeuAc_Synthase CMP-NeuAc_Synthase activates N-acetylneuraminic acid by adding CMP moiety. CMP-N-acetylneuraminic acid synthetase (CMP-NeuAc synthetase) or acylneuraminate cytidylyltransferase catalyzes the transfer the CMP moiety of CTP to the anomeric hydroxyl group of NeuAc in the presence of Mg++. It is the second to last step in the sialylation of the oligosaccharide component of glycoconjugates by providing the activated sugar-nucleotide cytidine 5'-monophosphate N-acetylneuraminic acid (CMP-Neu5Ac), the substrate for sialyltransferases. Eukaryotic CMP-NeuAc synthetases are predominantly located in the nucleus. The activated CMP-Neu5Ac diffuses from the nucleus into the cytoplasm.
Probab=78.43 E-value=51 Score=31.55 Aligned_cols=99 Identities=15% Similarity=0.188 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCC----CCCChHHHHHHHHhhcc----
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSP----GRVGLIKARLLGARQAE---- 283 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~----~n~G~~~arN~G~~~A~---- 283 (605)
+.+..+++.+.+.... .+|+|+-| ++.+ .+....++..+.+++.+ ...|...+...|++...
T Consensus 27 pll~~~l~~l~~~~~~---~~IvV~~~---~~~i----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~ 96 (223)
T cd02513 27 PLIAWTIEAALESKLF---DRVVVSTD---DEEI----AEVARKYGAEVPFLRPAELATDTASSIDVILHALDQLEELGR 96 (223)
T ss_pred cHHHHHHHHHHhCCCC---CEEEEECC---cHHH----HHHHHHhCCCceeeCChHHCCCCCCcHHHHHHHHHHHHHhCC
Confidence 4667777777653322 36666532 2222 22333333223334332 12355555556665442
Q ss_pred -CCEEEEecCCcc-cCcChHHHHHHHHHcCCcEEEeeeE
Q psy10463 284 -GEILVFLDAHCE-CTLGWLENLVARVAEDRTRVVCPVI 320 (605)
Q Consensus 284 -gd~i~flD~D~~-~~~~~L~~ll~~~~~~~~~vv~p~i 320 (605)
.+.++++++|.- +.+..++.+++.+..+...++.+..
T Consensus 97 ~~d~vlv~~~D~P~i~~~~i~~~i~~~~~~~~~~~~~~~ 135 (223)
T cd02513 97 DFDIVVLLQPTSPLRSAEDIDEAIELLLSEGADSVFSVT 135 (223)
T ss_pred CCCEEEEeCCCCCcCCHHHHHHHHHHHHhCCCCEEEEEE
Confidence 389999999997 5899999999998765444444443
No 215
>cd04189 G1P_TT_long G1P_TT_long represents the long form of glucose-1-phosphate thymidylyltransferase. This family is the long form of Glucose-1-phosphate thymidylyltransferase. Glucose-1-phosphate thymidylyltransferase catalyses the formation of dTDP-glucose, from dTTP and glucose 1-phosphate. It is the first enzyme in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme.There are two forms of Glucose-1-phosphate thymidylyltransferase in bacteria and archeae; short form and long form. The long form, which has an extra 50 amino acids c-terminal, is found in many species for which it serves as a sugar-activating enzyme for antibiotic biosynthesis and or other, unknown pathways, and in which dTDP-L-rhamnose is not necessarily produced.The long from enzymes also have a left-handed parallel helix domain at the c-terminus, whereas, th eshort form enzymes do not have this domain. The homotetrameric, feedback inhibited short form is found in
Probab=78.30 E-value=68 Score=31.04 Aligned_cols=92 Identities=18% Similarity=0.144 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhcc-CCEEEEe
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAE-GEILVFL 290 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~-gd~i~fl 290 (605)
+.+...+..+.+.. - .+|+||-.. ....+.+.+.+.. .++..+.++..+...|.+.+.-.|..... .++ +++
T Consensus 32 ~li~~~l~~l~~~~-~---~~i~vv~~~-~~~~~~~~~~~~~-~~~~~i~~~~~~~~~g~~~sl~~a~~~i~~~~~-li~ 104 (236)
T cd04189 32 PIIQYAIEDLREAG-I---EDIGIVVGP-TGEEIKEALGDGS-RFGVRITYILQEEPLGLAHAVLAARDFLGDEPF-VVY 104 (236)
T ss_pred chHHHHHHHHHHCC-C---CEEEEEcCC-CHHHHHHHhcchh-hcCCeEEEEECCCCCChHHHHHHHHHhcCCCCE-EEE
Confidence 46777777776532 1 477766544 3332332222211 12335677767666788888877877654 555 457
Q ss_pred cCCcccCcChHHHHHHHHHcC
Q psy10463 291 DAHCECTLGWLENLVARVAED 311 (605)
Q Consensus 291 D~D~~~~~~~L~~ll~~~~~~ 311 (605)
.+|..+..+.. ++++...+.
T Consensus 105 ~~D~~~~~~~~-~~~~~~~~~ 124 (236)
T cd04189 105 LGDNLIQEGIS-PLVRDFLEE 124 (236)
T ss_pred ECCeecCcCHH-HHHHHHHhc
Confidence 88888877654 566555443
No 216
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=77.99 E-value=30 Score=37.64 Aligned_cols=102 Identities=16% Similarity=0.097 Sum_probs=55.6
Q ss_pred CCCCcEEEEEEeecCchHHH----HHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHH---HHHHhcC--CCeEEeec
Q psy10463 87 EFLPKSSIVIVFHNEAWSAL----LRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLD---EYVAKLS--VPTRVIRS 157 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l----~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~---~~~~~~~--~~v~~~~~ 157 (605)
.+.-++.|+||+|||....+ ..+.+|+.....-+ .|.+.|+-|--+.+..-..-+ ++.++.+ .+|-+-+.
T Consensus 141 p~~hrTAilmPiynEd~~rVfAgLrA~~eSla~Tg~~~-~FD~FVLSDs~dpdialAEq~a~~~l~~e~~g~~~ifYRrR 219 (736)
T COG2943 141 PDLHRTAILMPIYNEDVNRVFAGLRATYESLAATGHAE-HFDFFVLSDSRDPDIALAEQKAWAELCRELGGEGNIFYRRR 219 (736)
T ss_pred CcccceeEEeeccccCHHHHHHHHHHHHHHHHhhCCcc-cceEEEEcCCCCchhhhhHHHHHHHHHHHhCCCCceeeehH
Confidence 34556899999999987554 44555655544333 277877777544432111122 2333444 33555444
Q ss_pred CCCcch-HHHHHHHhh--hccCceEEEecCccccc
Q psy10463 158 PGRVGL-IKARLLGAR--QAEGEILVFLDAHCECT 189 (605)
Q Consensus 158 ~~~~G~-~~a~n~g~~--~a~g~~i~~lD~d~~~~ 189 (605)
.+|.|- ++...-=.+ -...++++.||+|....
T Consensus 220 r~n~~RKaGNIaDfcrRwG~~Y~~MlVLDADSvMt 254 (736)
T COG2943 220 RRNVKRKAGNIADFCRRWGSAYSYMLVLDADSVMT 254 (736)
T ss_pred hhhhcccccCHHHHHHHhCcccceEEEeecccccC
Confidence 444332 221111111 13578999999998654
No 217
>cd02518 GT2_SpsF SpsF is a glycosyltrnasferase implicated in the synthesis of the spore coat. Spore coat polysaccharide biosynthesis protein F (spsF) is a glycosyltransferase implicated in the synthesis of the spore coat in a variety of bacteria challenged by stress as starvation. The spsF gene is expressed in the late stage of coat development responsible for a terminal step in coat formation that involves the glycosylation of the coat. SpsF gene mutation resulted in spores that appeared normal. But, the spores tended to aggregate and had abnormal adsorption properties, indicating a surface alteration.
Probab=77.76 E-value=24 Score=34.41 Aligned_cols=94 Identities=13% Similarity=0.194 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCC-hHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhccCCEEEEe
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDAST-REFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFL 290 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~-d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~gd~i~fl 290 (605)
+.+..++..+...... .+|+||-+... ++ .+.++.... .++++..+...+.+ ....+++....++++++
T Consensus 25 pli~~~i~~l~~~~~~---~~ivVv~~~~~~~~----~i~~~~~~~--~v~~v~~~~~~~l~-~~~~~~~~~~~d~vli~ 94 (233)
T cd02518 25 PLLEHLLDRLKRSKLI---DEIVIATSTNEEDD----PLEALAKKL--GVKVFRGSEEDVLG-RYYQAAEEYNADVVVRI 94 (233)
T ss_pred cHHHHHHHHHHhCCCC---CeEEEECCCCcccH----HHHHHHHHc--CCeEEECCchhHHH-HHHHHHHHcCCCEEEEe
Confidence 4666777766643212 36777655433 12 233333333 46777776643333 22334444567999999
Q ss_pred cCCcc-cCcChHHHHHHHHHcCCcEE
Q psy10463 291 DAHCE-CTLGWLENLVARVAEDRTRV 315 (605)
Q Consensus 291 D~D~~-~~~~~L~~ll~~~~~~~~~v 315 (605)
++|.- +.++.++.+++.+...+..+
T Consensus 95 ~~D~P~i~~~~i~~li~~~~~~~~~~ 120 (233)
T cd02518 95 TGDCPLIDPEIIDAVIRLFLKSGADY 120 (233)
T ss_pred CCCCCCCCHHHHHHHHHHHHhCCCCE
Confidence 99997 58999999999887654443
No 218
>PF13733 Glyco_transf_7N: N-terminal region of glycosyl transferase group 7; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=77.26 E-value=12 Score=33.19 Aligned_cols=70 Identities=16% Similarity=0.207 Sum_probs=41.3
Q ss_pred cEEEEEEeecCchHHHHHHHHH---HHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHH
Q psy10463 91 KSSIVIVFHNEAWSALLRTVHS---VISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKAR 167 (605)
Q Consensus 91 ~~Siiip~yN~~~~~l~~~l~s---v~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~ 167 (605)
++.||||..|.+ +.|...|.. +|++.. +.+.|.||+-..+.. .-.+.-.
T Consensus 48 kvAiIIPyRdR~-~hL~~fl~~l~~~L~rQ~--~~y~I~vieQ~~~~~-------------------------FNRg~L~ 99 (136)
T PF13733_consen 48 KVAIIIPYRDRE-EHLRIFLPHLHPFLQRQQ--LDYRIFVIEQVDNGP-------------------------FNRGKLM 99 (136)
T ss_dssp EEEEEEEESS-H-HHHHHHHHHHHHHHHHTT---EEEEEEEEE-SSS----------------------------HHHHH
T ss_pred ceEEEEEeCCHH-HHHHHHHHHHHHHHhhCc--ceEEEEEEeeccCCC-------------------------Cchhhhh
Confidence 799999999988 777766554 444332 235777776654332 2234456
Q ss_pred HHHhhhc----cCceEEEecCcccc
Q psy10463 168 LLGARQA----EGEILVFLDAHCEC 188 (605)
Q Consensus 168 n~g~~~a----~g~~i~~lD~d~~~ 188 (605)
|.|...| ..+.++|-|-|.-+
T Consensus 100 NvGf~eA~~~~~~dc~ifHDVDllP 124 (136)
T PF13733_consen 100 NVGFLEALKDDDFDCFIFHDVDLLP 124 (136)
T ss_dssp HHHHHHHHHHS--SEEEEE-TTEEE
T ss_pred hHHHHHHhhccCCCEEEEecccccc
Confidence 7777766 35788999988743
No 219
>TIGR03584 PseF pseudaminic acid CMP-transferase. The sequences in this family include the pfam02348 (cytidyltransferase) domain and are homologous to the NeuA protein responsible for the transfer of CMP to neuraminic acid. According to, this gene is responsible for the transfer of CMP to the structurally related sugar, pseudaminic acid which is observed as a component of sugar modifications of flagellin in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci.
Probab=76.93 E-value=75 Score=30.82 Aligned_cols=91 Identities=8% Similarity=0.084 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCC----CCCChHHHHHHHHhhc----c
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSP----GRVGLIKARLLGARQA----E 283 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~----~n~G~~~arN~G~~~A----~ 283 (605)
+.+..+++.+++.... .+|+|+-| ++. +.+++.+++..+.+.+.+ ...|...+...|++.. .
T Consensus 25 pLi~~ti~~a~~s~~~---d~IvVstd---~~~----i~~~a~~~g~~v~~~r~~~l~~d~~~~~~si~~~l~~l~~~~~ 94 (222)
T TIGR03584 25 PMIAYSIEAALNSGLF---DKVVVSTD---DEE----IAEVAKSYGASVPFLRPKELADDFTGTAPVVKHAIEELKLQKQ 94 (222)
T ss_pred CHHHHHHHHHHhCCCC---CEEEEeCC---CHH----HHHHHHHcCCEeEEeChHHHcCCCCCchHHHHHHHHHHhhcCC
Confidence 5677788877664332 35655332 222 333444554233333322 2345555666666543 3
Q ss_pred CCEEEEecCCccc-CcChHHHHHHHHHcCC
Q psy10463 284 GEILVFLDAHCEC-TLGWLENLVARVAEDR 312 (605)
Q Consensus 284 gd~i~flD~D~~~-~~~~L~~ll~~~~~~~ 312 (605)
.+.++++++|.-+ .++.++.+++.+.++.
T Consensus 95 ~d~v~~l~~tsPl~~~~~I~~~i~~~~~~~ 124 (222)
T TIGR03584 95 YDHACCIYATAPFLQAKILKEAFELLKQPN 124 (222)
T ss_pred CCEEEEecCCCCcCCHHHHHHHHHHHHhCC
Confidence 6999999999975 8899999999988653
No 220
>cd06422 NTP_transferase_like_1 NTP_transferase_like_1 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.
Probab=76.06 E-value=45 Score=32.00 Aligned_cols=94 Identities=5% Similarity=0.026 Sum_probs=56.5
Q ss_pred EEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHH--CCCCEEEEeCC-CCCChHHHHHHHHh
Q psy10463 204 IVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAK--LSVPTRVIRSP-GRVGLIKARLLGAR 280 (605)
Q Consensus 204 Ip~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~--~~~~v~~i~~~-~n~G~~~arN~G~~ 280 (605)
+|.-++ +.+...|.++.+..- .+|+||-... ...+ .++... .+..+.+.... +..|.+.+...|..
T Consensus 25 lpi~g~--~li~~~l~~l~~~gi----~~i~iv~~~~-~~~i----~~~~~~~~~~~~i~~~~~~~~~~g~~~~l~~~~~ 93 (221)
T cd06422 25 VPVAGK--PLIDHALDRLAAAGI----RRIVVNTHHL-ADQI----EAHLGDSRFGLRITISDEPDELLETGGGIKKALP 93 (221)
T ss_pred eeECCE--EHHHHHHHHHHHCCC----CEEEEEccCC-HHHH----HHHHhcccCCceEEEecCCCcccccHHHHHHHHH
Confidence 344443 467777777766432 4677765432 2222 233322 33345555544 45788888888887
Q ss_pred hccCCEEEEecCCcccCcChHHHHHHHHH
Q psy10463 281 QAEGEILVFLDAHCECTLGWLENLVARVA 309 (605)
Q Consensus 281 ~A~gd~i~flD~D~~~~~~~L~~ll~~~~ 309 (605)
....+.++++++|..+..+... ++....
T Consensus 94 ~~~~~~~lv~~~D~i~~~~~~~-~~~~~~ 121 (221)
T cd06422 94 LLGDEPFLVVNGDILWDGDLAP-LLLLHA 121 (221)
T ss_pred hcCCCCEEEEeCCeeeCCCHHH-HHHHHH
Confidence 7655788999999998887655 454443
No 221
>PF11316 Rhamno_transf: Putative rhamnosyl transferase ; InterPro: IPR021466 This bacterial family of proteins has no known function.
Probab=75.63 E-value=10 Score=37.19 Aligned_cols=78 Identities=15% Similarity=0.123 Sum_probs=46.9
Q ss_pred HHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHh---hhccCceE--EEec
Q psy10463 109 TVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGA---RQAEGEIL--VFLD 183 (605)
Q Consensus 109 ~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~---~~a~g~~i--~~lD 183 (605)
||-|+..||.++ |.+||+=|....+...+-|.++.+..+ .++++..+... ...+....+ ....++++ +-||
T Consensus 47 ~LpSl~~QTd~d--F~~lv~~~~~~P~~~~~rL~~l~~~~p-~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~RLD 122 (234)
T PF11316_consen 47 CLPSLRAQTDQD--FTWLVLFDDDLPEPYRERLRDLLADYP-QFRIVFRPPGP-HRDAMRRAINAARRDGADPVLQFRLD 122 (234)
T ss_pred HhhHHHhccCCC--eEEEEEECCCCCHHHHHHHHHHhccCC-CcEEEecCCch-HHHHHHHHHhhhccCCCCEEEEEEEC
Confidence 889999999998 777764444444444555777766665 35555444322 333333332 22345544 5679
Q ss_pred Ccccccc
Q psy10463 184 AHCECTL 190 (605)
Q Consensus 184 ~d~~~~~ 190 (605)
.||-+..
T Consensus 123 dDDAl~~ 129 (234)
T PF11316_consen 123 DDDALHR 129 (234)
T ss_pred CcchhhH
Confidence 9997763
No 222
>TIGR02665 molyb_mobA molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial. In many molybdopterin-containing enzymes, including nitrate reductase and dimethylsulfoxide reductase, the cofactor is molybdopterin-guanine dinucleotide. The family described here contains MobA, molybdopterin-guanine dinucleotide biosynthesis protein A, from the Proteobacteria only. MobA can reconstitute molybdopterin-guanine dinucleotide biosynthesis without the product of the neighboring gene MobB. The probable MobA proteins of other lineages differ sufficiently that they are not included in scope of this family.
Probab=75.29 E-value=25 Score=32.69 Aligned_cols=88 Identities=10% Similarity=0.123 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeC--CCCCChHHHHHHHHhhccCCEEEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRS--PGRVGLIKARLLGARQAEGEILVF 289 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~--~~n~G~~~arN~G~~~A~gd~i~f 289 (605)
..+..+++.+... ..+|+|+-+..... +..... .+.++.. +...|...+.-.|+..+..+++++
T Consensus 28 pll~~~l~~l~~~-----~~~ivv~~~~~~~~--------~~~~~~-~~~~i~~~~~~~~g~~~si~~al~~~~~~~vlv 93 (186)
T TIGR02665 28 PLIEHVLARLRPQ-----VSDLAISANRNPER--------YAQAGF-GLPVVPDALADFPGPLAGILAGLRWAGTDWVLT 93 (186)
T ss_pred EHHHHHHHHHHhh-----CCEEEEEcCCCHHH--------HhhccC-CCcEEecCCCCCCCCHHHHHHHHHhcCCCeEEE
Confidence 4667777766531 24777775432111 111111 3455554 334788888888998888899999
Q ss_pred ecCCc-ccCcChHHHHHHHHHcCCc
Q psy10463 290 LDAHC-ECTLGWLENLVARVAEDRT 313 (605)
Q Consensus 290 lD~D~-~~~~~~L~~ll~~~~~~~~ 313 (605)
+++|. .++++.++.+++.+.+...
T Consensus 94 ~~~D~P~i~~~~i~~l~~~~~~~~~ 118 (186)
T TIGR02665 94 VPCDTPFLPEDLVARLAAALEASDA 118 (186)
T ss_pred EecCCCcCCHHHHHHHHHHhhccCC
Confidence 99998 5699999999998875443
No 223
>cd06426 NTP_transferase_like_2 NTP_trnasferase_like_2 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.
Probab=74.83 E-value=80 Score=30.11 Aligned_cols=176 Identities=13% Similarity=0.149 Sum_probs=87.2
Q ss_pred EEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHH---CCCCEEEEeCCCCCChHHHHHHHHh
Q psy10463 204 IVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAK---LSVPTRVIRSPGRVGLIKARLLGAR 280 (605)
Q Consensus 204 Ip~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~---~~~~v~~i~~~~n~G~~~arN~G~~ 280 (605)
+|..++ +.+..+|..+....- .+|+||-+.. .+ .+.++..+ .+..+.++..+...|.+.+.-.+.
T Consensus 24 l~~~g~--pli~~~l~~l~~~~~----~~iivv~~~~-~~----~i~~~~~~~~~~~~~i~~~~~~~~~g~~~~l~~~~- 91 (220)
T cd06426 24 LKVGGK--PILETIIDRFIAQGF----RNFYISVNYL-AE----MIEDYFGDGSKFGVNISYVREDKPLGTAGALSLLP- 91 (220)
T ss_pred CeECCc--chHHHHHHHHHHCCC----cEEEEECccC-HH----HHHHHHCCccccCccEEEEECCCCCcchHHHHHHH-
Confidence 344444 467777777765422 3666664322 22 23333321 223466666555677777664433
Q ss_pred hccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhhh
Q psy10463 281 QAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIK 360 (605)
Q Consensus 281 ~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~ 360 (605)
....+.++++.+|.... ..+..+++.+......++........... .|...-.- .+.....
T Consensus 92 ~~~~~~~lv~~~D~i~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----------~g~~~~d~-~~v~~~~------- 152 (220)
T cd06426 92 EKPTDPFLVMNGDILTN-LNYEHLLDFHKENNADATVCVREYEVQVP----------YGVVETEG-GRITSIE------- 152 (220)
T ss_pred hhCCCCEEEEcCCEeec-cCHHHHHHHHHhcCCCEEEEEEEcCCCCc----------ceEEEECC-CEEEEEE-------
Confidence 33366778888997554 45678888776654333222211111111 11110000 0010000
Q ss_pred ccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEec
Q psy10463 361 RKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAP 420 (605)
Q Consensus 361 ~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p 420 (605)
..+-.++.+.+|.+.+++++|+.+-. +- ..+=.++...+...|.++...+
T Consensus 153 ----ek~~~~~~~~~Giy~~~~~~~~~i~~---~~---~~~l~~~~~~~i~~~~~i~~~~ 202 (220)
T cd06426 153 ----EKPTHSFLVNAGIYVLEPEVLDLIPK---NE---FFDMPDLIEKLIKEGKKVGVFP 202 (220)
T ss_pred ----ECCCCCCeEEEEEEEEcHHHHhhcCC---CC---CcCHHHHHHHHHHCCCcEEEEE
Confidence 00111234567899999999987631 10 0122356677777886665543
No 224
>TIGR03552 F420_cofC 2-phospho-L-lactate guanylyltransferase CofC. Members of this protein family are the CofC enzyme of coenzyme F420 biosynthesis.
Probab=74.35 E-value=28 Score=32.79 Aligned_cols=93 Identities=26% Similarity=0.292 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhcc--CCEEEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAE--GEILVF 289 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~--gd~i~f 289 (605)
..+..++..+.... . .++++|.+. .+ . ..+.... .++++.++. .|+..+...|++.+. ++.+++
T Consensus 31 ~ll~~~l~~l~~~~-~---~~vvvv~~~--~~-~----~~~~~~~--~v~~i~~~~-~G~~~si~~al~~~~~~~~~vlv 96 (195)
T TIGR03552 31 AMLRDVITALRGAG-A---GAVLVVSPD--PA-L----LEAARNL--GAPVLRDPG-PGLNNALNAALAEAREPGGAVLI 96 (195)
T ss_pred HHHHHHHHHHHhcC-C---CCEEEECCC--HH-H----HHHHHhc--CCEEEecCC-CCHHHHHHHHHHHhhccCCeEEE
Confidence 45556666555432 1 256666542 21 2 2223332 477777665 499999888887653 468999
Q ss_pred ecCCcc-cCcChHHHHHHHHHcCCcEEEeee
Q psy10463 290 LDAHCE-CTLGWLENLVARVAEDRTRVVCPV 319 (605)
Q Consensus 290 lD~D~~-~~~~~L~~ll~~~~~~~~~vv~p~ 319 (605)
+-+|+- +.+..++.+++.+.. ...+++|.
T Consensus 97 ~~~D~P~l~~~~i~~l~~~~~~-~~~vi~p~ 126 (195)
T TIGR03552 97 LMADLPLLTPRELKRLLAAATE-GDVVIAPD 126 (195)
T ss_pred EeCCCCCCCHHHHHHHHHhccc-CCEEEEec
Confidence 999987 599999999998753 44666665
No 225
>PRK13385 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Provisional
Probab=74.29 E-value=26 Score=34.13 Aligned_cols=92 Identities=13% Similarity=0.262 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCC---CCEEEEeCCCCCChHHHHHHHHhhc-cCCEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLS---VPTRVIRSPGRVGLIKARLLGARQA-EGEIL 287 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~---~~v~~i~~~~n~G~~~arN~G~~~A-~gd~i 287 (605)
+.+..++..+...... .+|+||-+..... .++++..+++ .+++++.... +...+.-.|+... ..+++
T Consensus 31 pll~~~i~~~~~~~~~---~~ivVv~~~~~~~----~~~~~~~~~~~~~~~~~~v~~g~--~r~~sv~~gl~~~~~~d~v 101 (230)
T PRK13385 31 PIFIHALRPFLADNRC---SKIIIVTQAQERK----HVQDLMKQLNVADQRVEVVKGGT--ERQESVAAGLDRIGNEDVI 101 (230)
T ss_pred EHHHHHHHHHHcCCCC---CEEEEEeChhhHH----HHHHHHHhcCcCCCceEEcCCCc--hHHHHHHHHHHhccCCCeE
Confidence 5677788777654322 3666664332211 2333333332 1455554332 3345556666654 35789
Q ss_pred EEecCCcc-cCcChHHHHHHHHHcCC
Q psy10463 288 VFLDAHCE-CTLGWLENLVARVAEDR 312 (605)
Q Consensus 288 ~flD~D~~-~~~~~L~~ll~~~~~~~ 312 (605)
+++|+|.- +.++.++.+++.+.+..
T Consensus 102 li~~~d~P~i~~~~i~~li~~~~~~~ 127 (230)
T PRK13385 102 LVHDGARPFLTQDIIDRLLEGVAKYG 127 (230)
T ss_pred EEccCCCCCCCHHHHHHHHHHHhhCC
Confidence 99999997 59999999999987654
No 226
>cd02538 G1P_TT_short G1P_TT_short is the short form of glucose-1-phosphate thymidylyltransferase. This family is the short form of glucose-1-phosphate thymidylyltransferase. Glucose-1-phosphate thymidylyltransferase catalyses the formation of dTDP-glucose, from dTTP and glucose 1-phosphate. It is the first enzyme in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme.There are two forms of Glucose-1-phosphate thymidylyltransferase in bacteria and archeae; short form and long form. The homotetrameric, feedback inhibited short form is found in numerous bacterial species that produce dTDP-L-rhamnose. The long form, which has an extra 50 amino acids c-terminal, is found in many species for which it serves as a sugar-activating enzyme for antibiotic biosynthesis and or other, unknown pathways, and in which dTDP-L-rhamnose is not necessarily produced.
Probab=73.94 E-value=91 Score=30.35 Aligned_cols=91 Identities=14% Similarity=0.214 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHH---HCCCCEEEEeCCCCCChHHHHHHHHhhccCCEEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVA---KLSVPTRVIRSPGRVGLIKARLLGARQAEGEILV 288 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~---~~~~~v~~i~~~~n~G~~~arN~G~~~A~gd~i~ 288 (605)
+.+...|.++.+... .+|++|-.....+. +.++.. .++..+.+...+...|.+.|...+......+-++
T Consensus 32 pli~~~l~~l~~~gi----~~i~vv~~~~~~~~----~~~~l~~~~~~~~~i~~~~~~~~~G~~~al~~a~~~~~~~~~l 103 (240)
T cd02538 32 PMIYYPLSTLMLAGI----REILIISTPEDLPL----FKELLGDGSDLGIRITYAVQPKPGGLAQAFIIGEEFIGDDPVC 103 (240)
T ss_pred EhHHHHHHHHHHCCC----CEEEEEeCcchHHH----HHHHHhcccccCceEEEeeCCCCCCHHHHHHHHHHhcCCCCEE
Confidence 567777777765321 47777644322121 233332 2233466666666688988888787766555556
Q ss_pred EecCCcccCcChHHHHHHHHHc
Q psy10463 289 FLDAHCECTLGWLENLVARVAE 310 (605)
Q Consensus 289 flD~D~~~~~~~L~~ll~~~~~ 310 (605)
++.+|..+.+.-+..+++...+
T Consensus 104 v~~gD~~~~~~~~~~~~~~~~~ 125 (240)
T cd02538 104 LILGDNIFYGQGLSPILQRAAA 125 (240)
T ss_pred EEECCEEEccHHHHHHHHHHHh
Confidence 6678876655557788876654
No 227
>cd02508 ADP_Glucose_PP ADP-glucose pyrophosphorylase is involved in the biosynthesis of glycogen or starch. ADP-glucose pyrophosphorylase (glucose-1-phosphate adenylyltransferase) catalyzes a very important step in the biosynthesis of alpha 1,4-glucans (glycogen or starch) in bacteria and plants: synthesis of the activated glucosyl donor, ADP-glucose, from glucose-1-phosphate and ATP. ADP-glucose pyrophosphorylase is a tetrameric allosterically regulated enzyme. While a homotetramer in bacteria, in plant chloroplasts and amyloplasts, it is a heterotetramer of two different, yet evolutionary related, subunits. There are a number of conserved regions in the sequence of bacterial and plant ADP-glucose pyrophosphorylase subunits. It is a subfamily of a very diverse glycosy transferase family 2.
Probab=73.85 E-value=79 Score=29.81 Aligned_cols=100 Identities=9% Similarity=0.052 Sum_probs=58.5
Q ss_pred EEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHH---CC-----CCEEEEe------CCCC
Q psy10463 203 VIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAK---LS-----VPTRVIR------SPGR 268 (605)
Q Consensus 203 IIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~---~~-----~~v~~i~------~~~n 268 (605)
.+|..+.. +.+..++..+..... .+|+||-....+. +.++... ++ ..++++. .+..
T Consensus 23 llpv~g~~-pli~~~l~~l~~~gi----~~iivv~~~~~~~-----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (200)
T cd02508 23 AVPFGGRY-RLIDFPLSNMVNSGI----RNVGVLTQYKSRS-----LNDHLGSGKEWDLDRKNGGLFILPPQQRKGGDWY 92 (200)
T ss_pred eeEECCee-eeHHHHHHHHHHCCC----CEEEEEeCCChHH-----HHHHHhCCCcccCCCCCCCEEEeCcccCCCCCcc
Confidence 45666653 456666666665322 4787776544322 2223321 11 1255554 2345
Q ss_pred CChHHHHHHHHhhcc---CCEEEEecCCcccCcChHHHHHHHHHcCCc
Q psy10463 269 VGLIKARLLGARQAE---GEILVFLDAHCECTLGWLENLVARVAEDRT 313 (605)
Q Consensus 269 ~G~~~arN~G~~~A~---gd~i~flD~D~~~~~~~L~~ll~~~~~~~~ 313 (605)
.|.+.|...|..... .+.++++.+|... +.-+..+++...+...
T Consensus 93 ~Gta~al~~a~~~i~~~~~~~~lv~~gD~v~-~~~~~~~l~~~~~~~~ 139 (200)
T cd02508 93 RGTADAIYQNLDYIERSDPEYVLILSGDHIY-NMDYREMLDFHIESGA 139 (200)
T ss_pred cCcHHHHHHHHHHHHhCCCCEEEEecCCEEE-ecCHHHHHHHHHHcCC
Confidence 788888877776542 5778899999854 4567888887665443
No 228
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=72.52 E-value=50 Score=33.39 Aligned_cols=104 Identities=17% Similarity=0.141 Sum_probs=62.1
Q ss_pred ceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCC---C------CC
Q psy10463 200 SSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG---R------VG 270 (605)
Q Consensus 200 vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~---n------~G 270 (605)
++||....|-. ..+..++.|++...... ..+-|++|+.+.+..+. +.+.....+..|.++.... . ..
T Consensus 3 ~~iv~~~~~y~-~~~~~~i~Sil~n~~~~--~~fhii~d~~s~~~~~~-l~~~~~~~~~~i~f~~i~~~~~~~~~~~~~~ 78 (280)
T cd06431 3 VAIVCAGYNAS-RDVVTLVKSVLFYRRNP--LHFHLITDEIARRILAT-LFQTWMVPAVEVSFYNAEELKSRVSWIPNKH 78 (280)
T ss_pred EEEEEccCCcH-HHHHHHHHHHHHcCCCC--EEEEEEECCcCHHHHHH-HHHhccccCcEEEEEEhHHhhhhhccCcccc
Confidence 56777775555 78899999999876433 68888888776654443 3332233333555555321 1 11
Q ss_pred hHH----HHHHHHhhc--cCCEEEEecCCcccCcChHHHHHHHH
Q psy10463 271 LIK----ARLLGARQA--EGEILVFLDAHCECTLGWLENLVARV 308 (605)
Q Consensus 271 ~~~----arN~G~~~A--~gd~i~flD~D~~~~~~~L~~ll~~~ 308 (605)
++. .|-...+.- .-+=+++||+|+++..+ |.+|.+.+
T Consensus 79 ~s~~y~y~RL~ip~llp~~~dkvLYLD~Diiv~~d-i~eL~~~~ 121 (280)
T cd06431 79 YSGIYGLMKLVLTEALPSDLEKVIVLDTDITFATD-IAELWKIF 121 (280)
T ss_pred hhhHHHHHHHHHHHhchhhcCEEEEEcCCEEEcCC-HHHHHHHh
Confidence 221 233333322 36789999999998544 56776653
No 229
>PLN02899 alpha-galactosidase
Probab=70.98 E-value=4.7 Score=44.64 Aligned_cols=79 Identities=15% Similarity=0.249 Sum_probs=45.6
Q ss_pred cccccc---ccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceee-cCCCeeeecCCCCCC-CCCceE
Q psy10463 514 FGRIRH---VQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIA-TDESVCLDVPEYEND-ISPRVR 588 (605)
Q Consensus 514 ~G~ir~---~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~-~~~~~CLd~~~~~~~-~g~~v~ 588 (605)
.|.++. ....+|||+..........-..-..-+| .+..||+|.++ .+|.+. ..+++|..+...... ..+.|.
T Consensus 475 ~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~fs~c--~~~~~q~w~l~-~~g~l~~~~sglca~v~~~~~~~~~~~~r 551 (633)
T PLN02899 475 QGKLHLLTSDGGELCLDASPKQKRTSKDFRSGSFSPC--RWDANQMWELN-NNGTLISSYSGLCATVNSVVAEVATGGVR 551 (633)
T ss_pred cceEEeeeccccChhhccCCCCCcCHhHhhccccCCC--CCChhhceeeC-CCCCEecCccccceEeeccccccccCcee
Confidence 455544 2367999986554321101111234579 45789999999 777766 578999998743211 112345
Q ss_pred EEeCCCC
Q psy10463 589 ILACSGF 595 (605)
Q Consensus 589 l~~C~~~ 595 (605)
.|--.|.
T Consensus 552 ~w~a~g~ 558 (633)
T PLN02899 552 SWIATGR 558 (633)
T ss_pred EEEEcCC
Confidence 5555443
No 230
>PRK13368 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional
Probab=70.94 E-value=44 Score=32.48 Aligned_cols=90 Identities=9% Similarity=0.088 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhccCCEEEEec
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLD 291 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~gd~i~flD 291 (605)
+.+...++.+.+...- .+|+|+-+. +. +.++.+.++.++.+.......|.++. -.++.....+.+++++
T Consensus 28 Pli~~~i~~l~~~~~~---~~ivv~t~~---~~----i~~~~~~~~~~v~~~~~~~~~g~~~~-~~a~~~~~~d~~lv~~ 96 (238)
T PRK13368 28 PMIQHVYERAAQAAGV---EEVYVATDD---QR----IEDAVEAFGGKVVMTSDDHLSGTDRL-AEVMLKIEADIYINVQ 96 (238)
T ss_pred CHHHHHHHHHHhcCCC---CeEEEECCh---HH----HHHHHHHcCCeEEecCccCCCccHHH-HHHHHhCCCCEEEEEc
Confidence 4666777766654221 477776431 22 33444444423322222333344432 2344444568999999
Q ss_pred CCc-ccCcChHHHHHHHHHcCC
Q psy10463 292 AHC-ECTLGWLENLVARVAEDR 312 (605)
Q Consensus 292 ~D~-~~~~~~L~~ll~~~~~~~ 312 (605)
+|. .+.+..+..+++.+...+
T Consensus 97 ~D~P~i~~~~i~~l~~~~~~~~ 118 (238)
T PRK13368 97 GDEPMIRPRDIDTLIQPMLDDP 118 (238)
T ss_pred CCcCcCCHHHHHHHHHHHHHCC
Confidence 998 468999999999886554
No 231
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=69.05 E-value=72 Score=31.36 Aligned_cols=92 Identities=11% Similarity=0.122 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCC--C----------hHHHHHHHH
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRV--G----------LIKARLLGA 279 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~--G----------~~~arN~G~ 279 (605)
..+.-++.|++..+... ..+.|+.++-+++ .++.++.........++++..+... . .+-+|-...
T Consensus 14 ~~~~v~i~Sl~~~~~~~--~~~~il~~~is~~-~~~~L~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~y~RL~i~ 90 (246)
T cd00505 14 RGAIVLMKSVLRHRTKP--LRFHVLTNPLSDT-FKAALDNLRKLYNFNYELIPVDILDSVDSEHLKRPIKIVTLTKLHLP 90 (246)
T ss_pred HHHHHHHHHHHHhCCCC--eEEEEEEccccHH-HHHHHHHHHhccCceEEEEeccccCcchhhhhcCccccceeHHHHHH
Confidence 78889999999987653 6888887775554 3445666554333345555443211 0 111233332
Q ss_pred hhc-cCCEEEEecCCcccCcChHHHHHHH
Q psy10463 280 RQA-EGEILVFLDAHCECTLGWLENLVAR 307 (605)
Q Consensus 280 ~~A-~gd~i~flD~D~~~~~~~L~~ll~~ 307 (605)
..- .-+=+++||+|+.+.. -|.+|.+.
T Consensus 91 ~llp~~~kvlYLD~D~iv~~-di~~L~~~ 118 (246)
T cd00505 91 NLVPDYDKILYVDADILVLT-DIDELWDT 118 (246)
T ss_pred HHhhccCeEEEEcCCeeecc-CHHHHhhc
Confidence 333 3778999999998864 45666654
No 232
>COG2068 Uncharacterized MobA-related protein [General function prediction only]
Probab=68.40 E-value=67 Score=30.59 Aligned_cols=97 Identities=20% Similarity=0.290 Sum_probs=66.2
Q ss_pred HHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCC-CCChHHHHHHHHhhccCC--EEEE
Q psy10463 213 ALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG-RVGLIKARLLGARQAEGE--ILVF 289 (605)
Q Consensus 213 ~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~-n~G~~~arN~G~~~A~gd--~i~f 289 (605)
.+..+++..+... ..++|||--.- . .+........ ..++++.++. ..|++...-.|++.+.++ .+++
T Consensus 33 lv~~~~~~a~~a~----~~~vivV~g~~-~---~~~~~a~~~~--~~~~~v~npd~~~Gls~Sl~ag~~a~~~~~~~v~~ 102 (199)
T COG2068 33 LVRASAETALSAG----LDRVIVVTGHR-V---AEAVEALLAQ--LGVTVVVNPDYAQGLSTSLKAGLRAADAEGDGVVL 102 (199)
T ss_pred HHHHHHHHHHhcC----CCeEEEEeCcc-h---hhHHHhhhcc--CCeEEEeCcchhhhHhHHHHHHHHhcccCCCeEEE
Confidence 4445555444322 14888885443 1 1122333332 3688888765 789999999999998766 9999
Q ss_pred ecCCcc-cCcChHHHHHHHHHcCCcEEEeeeE
Q psy10463 290 LDAHCE-CTLGWLENLVARVAEDRTRVVCPVI 320 (605)
Q Consensus 290 lD~D~~-~~~~~L~~ll~~~~~~~~~vv~p~i 320 (605)
+-.|.- +.++.+.++++.+.... .++.|..
T Consensus 103 ~lgDmP~V~~~t~~rl~~~~~~~~-~~v~p~~ 133 (199)
T COG2068 103 MLGDMPQVTPATVRRLIAAFRARG-AAVRPVY 133 (199)
T ss_pred EeCCCCCCCHHHHHHHHHhccccC-ceeeeec
Confidence 999997 79999999999998874 4555543
No 233
>PRK14360 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=68.21 E-value=59 Score=35.20 Aligned_cols=93 Identities=16% Similarity=0.132 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhcc--CCEEEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAE--GEILVF 289 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~--gd~i~f 289 (605)
+.+..+|.++.+... .+++||-... .+ .++++..... .++++..+...|.+.+.-.++.... .+.+++
T Consensus 30 pli~~~l~~l~~~g~----~~iivvv~~~-~~----~i~~~~~~~~-~i~~v~~~~~~G~~~sv~~~~~~l~~~~~~vlV 99 (450)
T PRK14360 30 SLVERVLDSCEELKP----DRRLVIVGHQ-AE----EVEQSLAHLP-GLEFVEQQPQLGTGHAVQQLLPVLKGFEGDLLV 99 (450)
T ss_pred hHHHHHHHHHHhCCC----CeEEEEECCC-HH----HHHHHhcccC-CeEEEEeCCcCCcHHHHHHHHHHhhccCCcEEE
Confidence 567777777765432 2454443322 22 2334443333 5888876666777777666665542 355677
Q ss_pred ecCCcc-cCcChHHHHHHHHHcCCcE
Q psy10463 290 LDAHCE-CTLGWLENLVARVAEDRTR 314 (605)
Q Consensus 290 lD~D~~-~~~~~L~~ll~~~~~~~~~ 314 (605)
+++|.. +.+..++.+++...+....
T Consensus 100 ~~~D~P~i~~~~l~~ll~~~~~~~~~ 125 (450)
T PRK14360 100 LNGDVPLLRPETLEALLNTHRSSNAD 125 (450)
T ss_pred EeCCccccCHHHHHHHHHHHHhcCCc
Confidence 999984 6888999999888765443
No 234
>PRK14355 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=67.74 E-value=59 Score=35.38 Aligned_cols=98 Identities=13% Similarity=0.061 Sum_probs=62.1
Q ss_pred EEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhcc
Q psy10463 204 IVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAE 283 (605)
Q Consensus 204 Ip~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~ 283 (605)
+|..+. +.+...|.++.+... .++++|-.... + .+.++..... .+.++..+...|.+.+...|+....
T Consensus 26 ~pi~g~--pli~~~l~~l~~~gi----~~iiiv~~~~~-~----~i~~~~~~~~-~i~~~~~~~~~Gt~~al~~a~~~l~ 93 (459)
T PRK14355 26 HPLAGR--PMVSWPVAAAREAGA----GRIVLVVGHQA-E----KVREHFAGDG-DVSFALQEEQLGTGHAVACAAPALD 93 (459)
T ss_pred ceeCCc--cHHHHHHHHHHhcCC----CeEEEEECCCH-H----HHHHHhccCC-ceEEEecCCCCCHHHHHHHHHHHhh
Confidence 344443 466777777665321 36666543222 2 1233333322 5777777777888888877776653
Q ss_pred --CCEEEEecCCc-ccCcChHHHHHHHHHcCCc
Q psy10463 284 --GEILVFLDAHC-ECTLGWLENLVARVAEDRT 313 (605)
Q Consensus 284 --gd~i~flD~D~-~~~~~~L~~ll~~~~~~~~ 313 (605)
.+.++++++|. .+.+..++.+++.......
T Consensus 94 ~~~~~vlv~~gD~p~~~~~~i~~l~~~~~~~~~ 126 (459)
T PRK14355 94 GFSGTVLILCGDVPLLRAETLQGMLAAHRATGA 126 (459)
T ss_pred ccCCcEEEEECCccCcCHHHHHHHHHHHHhcCC
Confidence 47899999998 5688899999988766543
No 235
>PLN03153 hypothetical protein; Provisional
Probab=67.60 E-value=24 Score=38.52 Aligned_cols=50 Identities=18% Similarity=0.262 Sum_probs=32.7
Q ss_pred cccceEEEEeHHHHhHhCCC-Ccccc----cccchhhHHHHHHHHcCCeEEEecce
Q psy10463 372 AMAGGLFAIDRAYFFHIGAY-DEEMQ----VWGGENLEMSFRVWQCGGSIEIAPCS 422 (605)
Q Consensus 372 ~~~G~~~~i~r~~f~~iGgf-De~~~----~~g~ED~dl~~Rl~~~G~~i~~~p~s 422 (605)
...|+.+++++.+.+.+-.+ |+-.. .| ++|..|..=+...|.++...|..
T Consensus 261 A~GGAG~~LSrPLae~L~~~~d~C~~rY~~~~-~gD~rL~~CL~elGV~LT~~~gf 315 (537)
T PLN03153 261 AFGGGGIAISYPLAEALSRILDDCLDRYPKLY-GSDDRLHACITELGVPLSREPGF 315 (537)
T ss_pred ccCCceEEEcHHHHHHHHHHhhhhhhhcccCC-CcHHHHHHHHHHcCCCceecCCc
Confidence 45677889999777766443 32221 23 57777888888888777665543
No 236
>KOG3916|consensus
Probab=67.48 E-value=14 Score=37.79 Aligned_cols=68 Identities=25% Similarity=0.309 Sum_probs=43.7
Q ss_pred cEEEEEEeecCchHHHHHHHHHH---HhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHH-
Q psy10463 91 KSSIVIVFHNEAWSALLRTVHSV---ISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKA- 166 (605)
Q Consensus 91 ~~Siiip~yN~~~~~l~~~l~sv---~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a- 166 (605)
+|.||||+-|.+ +.|...|+-+ |++.- ..-+|-|+.+..+.-+.+|
T Consensus 152 kvAIIIPfR~Re-~HL~~~l~~LhP~LqrQr-----------------------------L~y~iyVieQ~g~~~FNRak 201 (372)
T KOG3916|consen 152 KVAIIIPFRNRE-EHLRYLLHHLHPFLQRQR-----------------------------LDYRIYVIEQAGNKPFNRAK 201 (372)
T ss_pred eeEEEeecccHH-HHHHHHHHHhhHHHHhhh-----------------------------hceeEEEEEecCCCcccHHH
Confidence 699999999999 7777666554 33321 1223555555555555454
Q ss_pred -HHHHhhhc----cCceEEEecCcccc
Q psy10463 167 -RLLGARQA----EGEILVFLDAHCEC 188 (605)
Q Consensus 167 -~n~g~~~a----~g~~i~~lD~d~~~ 188 (605)
.|.|...| ..+-++|-|-|.-+
T Consensus 202 L~NVGf~eAlkd~~wdCfIFHDVDllP 228 (372)
T KOG3916|consen 202 LLNVGFLEALKDYGWDCFIFHDVDLLP 228 (372)
T ss_pred hhhhHHHHHHHhcCCCEEEEecccccc
Confidence 47777776 35668888888743
No 237
>PLN03193 beta-1,3-galactosyltransferase; Provisional
Probab=67.03 E-value=1e+02 Score=32.79 Aligned_cols=169 Identities=12% Similarity=0.125 Sum_probs=89.1
Q ss_pred eEEEeeCCCC--hHHHHHHHHHHHHHCCCCEEEEeCCCCC-ChHHH----HHHHHhhccCCEEEEecCCcccCcChHHHH
Q psy10463 232 EILLVDDAST--REFLKSSLDEYVAKLSVPTRVIRSPGRV-GLIKA----RLLGARQAEGEILVFLDAHCECTLGWLENL 304 (605)
Q Consensus 232 eIIvVDd~S~--d~~~~~~l~~~~~~~~~~v~~i~~~~n~-G~~~a----rN~G~~~A~gd~i~flD~D~~~~~~~L~~l 304 (605)
.++.|---|. ++.+...+++-.+.++ .+-++...+.. .+..- .-.+.+....+|++-.|+|+.+..+-|-..
T Consensus 179 ~vrFVIG~s~~~~~~ldr~Le~Ea~~yg-DIL~lDfvDsY~NLT~KTl~~f~wA~~~~dAkF~mK~DDDvfVnv~~L~~~ 257 (408)
T PLN03193 179 IIRFVIGHSATSGGILDRAIEAEDRKHG-DFLRLDHVEGYLELSAKTKTYFATAVAMWDADFYVKVDDDVHVNIATLGET 257 (408)
T ss_pred EEEEEeecCCCcchHHHHHHHHHHHHhC-CEEEEecccccccchHHHHHHHHHHHHcCCCeEEEEcCCCceEcHHHHHHH
Confidence 4444544443 3445556666667776 45444333321 22222 223444457899999999999998877777
Q ss_pred HHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhhhccCCCCccccccccceEEEEeHHH
Q psy10463 305 VARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAY 384 (605)
Q Consensus 305 l~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~ 384 (605)
|......+...+|.+.. .+.... .+. -| ....++..+ .+ ....-|...|+..++++++
T Consensus 258 L~~~~~~~rlYiG~m~~---------gPvr~~-~~~-ky-~epe~w~~~---------~~-~~~YPpyAsG~gYVlS~DL 315 (408)
T PLN03193 258 LVRHRKKPRVYIGCMKS---------GPVLSQ-KGV-RY-HEPEYWKFG---------EN-GNKYFRHATGQLYAISKDL 315 (408)
T ss_pred HHhcCCCCCEEEEeccc---------CccccC-CCC-cC-cCccccccc---------Cc-cccCCCCCCcceEEehHHH
Confidence 75443333343332210 000000 000 00 000001000 00 0111346788899999999
Q ss_pred HhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecceEEE
Q psy10463 385 FFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPCSHVA 425 (605)
Q Consensus 385 f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~ 425 (605)
...|-.--..+..|..||+-+ =+|..|..+.++-+.+..
T Consensus 316 a~~I~~n~~~L~~y~~EDV~v--G~Wl~~L~V~~vdd~~fc 354 (408)
T PLN03193 316 ASYISINQHVLHKYANEDVSL--GSWFIGLDVEHIDDRRLC 354 (408)
T ss_pred HHHHHhChhhhcccCcchhhh--hhHhccCCceeeeccccc
Confidence 988864455666667888765 467778777665554443
No 238
>PRK14353 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=66.85 E-value=42 Score=36.29 Aligned_cols=92 Identities=18% Similarity=0.167 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhc--cCCEEEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQA--EGEILVF 289 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A--~gd~i~f 289 (605)
+.+...++.+..... .+|+||-.. ..+. +.++.......+.++......|.+.+.-.++... ..+.+++
T Consensus 34 pli~~~l~~l~~~gi----~~ivvv~~~-~~~~----i~~~~~~~~~~~~~~~~~~~~G~~~sl~~a~~~l~~~~~~~lv 104 (446)
T PRK14353 34 PMLAHVLAAAASLGP----SRVAVVVGP-GAEA----VAAAAAKIAPDAEIFVQKERLGTAHAVLAAREALAGGYGDVLV 104 (446)
T ss_pred hHHHHHHHHHHhCCC----CcEEEEECC-CHHH----HHHHhhccCCCceEEEcCCCCCcHHHHHHHHHHHhccCCCEEE
Confidence 567777777765432 366655432 2222 3333333322455555566678777776676654 2467788
Q ss_pred ecCCc-ccCcChHHHHHHHHHcCC
Q psy10463 290 LDAHC-ECTLGWLENLVARVAEDR 312 (605)
Q Consensus 290 lD~D~-~~~~~~L~~ll~~~~~~~ 312 (605)
+++|. .+.+..++.+++......
T Consensus 105 ~~~D~P~i~~~~l~~l~~~~~~~~ 128 (446)
T PRK14353 105 LYGDTPLITAETLARLRERLADGA 128 (446)
T ss_pred EeCCcccCCHHHHHHHHHhHhcCC
Confidence 89998 678899999998665443
No 239
>COG1212 KdsB CMP-2-keto-3-deoxyoctulosonic acid synthetase [Cell envelope biogenesis, outer membrane]
Probab=66.25 E-value=60 Score=31.53 Aligned_cols=173 Identities=13% Similarity=0.134 Sum_probs=92.0
Q ss_pred eeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhc--cCCEEEEecCCccc-CcChHHHHHHH
Q psy10463 231 KEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQA--EGEILVFLDAHCEC-TLGWLENLVAR 307 (605)
Q Consensus 231 ~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A--~gd~i~flD~D~~~-~~~~L~~ll~~ 307 (605)
.++||--| |+. +.+.+..++..+-.-+...+.|--+..-...+.+ ..++|+=+-.|.-+ +|.-+..+++.
T Consensus 44 ~rvvVATD---de~----I~~av~~~G~~avmT~~~h~SGTdR~~Ev~~~l~~~~~~iIVNvQGDeP~i~p~~I~~~~~~ 116 (247)
T COG1212 44 DRVVVATD---DER----IAEAVQAFGGEAVMTSKDHQSGTDRLAEVVEKLGLPDDEIIVNVQGDEPFIEPEVIRAVAEN 116 (247)
T ss_pred CeEEEEcC---CHH----HHHHHHHhCCEEEecCCCCCCccHHHHHHHHhcCCCcceEEEEccCCCCCCCHHHHHHHHHH
Confidence 47776533 222 3344555654555555555556444332222222 55799999999864 88999999999
Q ss_pred HHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhH
Q psy10463 308 VAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFH 387 (605)
Q Consensus 308 ~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~ 387 (605)
+++....++++.....+.....-..............+.|....+|-.... ... .|+ .-.=|..++||.++++
T Consensus 117 L~~~~~~~aTl~~~i~~~ee~~nPN~VKvV~d~~g~ALYFSRs~iP~~rd~---~~~-~p~---l~HIGIYayr~~~L~~ 189 (247)
T COG1212 117 LENSNADMATLAVKITDEEEAFNPNVVKVVLDKEGYALYFSRAPIPYGRDN---FGG-TPF---LRHIGIYAYRAGFLER 189 (247)
T ss_pred HHhCCcceeeeeeecCCHHHhcCCCcEEEEEcCCCcEEEEEcCCCCCcccc---cCC-cch---hheeehHHhHHHHHHH
Confidence 998877777766543333221100000000111112233333333221000 000 111 1122567889999999
Q ss_pred hCCCCcccccccchhhHHHHHHHHcCCeEEEe
Q psy10463 388 IGAYDEEMQVWGGENLEMSFRVWQCGGSIEIA 419 (605)
Q Consensus 388 iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~ 419 (605)
...+-+..-- -.|.+|- +|+...|.+|.+.
T Consensus 190 f~~~~ps~LE-~~E~LEQ-LR~Le~G~kI~v~ 219 (247)
T COG1212 190 FVALKPSPLE-KIESLEQ-LRVLENGEKIHVE 219 (247)
T ss_pred HHhcCCchhH-HHHHHHH-HHHHHcCCeeEEE
Confidence 8777665421 2456664 7888999998764
No 240
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []. It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.
Probab=66.25 E-value=16 Score=36.42 Aligned_cols=110 Identities=13% Similarity=0.123 Sum_probs=51.6
Q ss_pred cCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhhhcc
Q psy10463 283 EGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRK 362 (605)
Q Consensus 283 ~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~ 362 (605)
..+|++++|+|+.+...-|..+|..+.......+|-.. ..... .+. .+..... ..
T Consensus 86 ~~~Wf~~~DDDtyv~~~~L~~~L~~~~~~~~~yiG~~~----------~~~~~--~~~------~~~~~~~-------~~ 140 (252)
T PF02434_consen 86 DKDWFCFADDDTYVNVENLRRLLSKYDPSEPIYIGRPS----------GDRPI--EII------HRFNPNK-------SK 140 (252)
T ss_dssp T-SEEEEEETTEEE-HHHHHHHHTTS-TTS--EEE-EE------------------------------------------
T ss_pred CceEEEEEeCCceecHHHHHHHHhhCCCccCEEeeeec----------cCccc--eee------ccccccc-------cC
Confidence 56999999999999888888888776655444433111 00000 000 0000000 00
Q ss_pred CCCCccccccccceEEEEeHHHHhHh-----C-CCCcccc-cccchhhHHHHHHHH-cCCeEEEec
Q psy10463 363 DFTEPFKTPAMAGGLFAIDRAYFFHI-----G-AYDEEMQ-VWGGENLEMSFRVWQ-CGGSIEIAP 420 (605)
Q Consensus 363 ~~~~~~~~~~~~G~~~~i~r~~f~~i-----G-gfDe~~~-~~g~ED~dl~~Rl~~-~G~~i~~~p 420 (605)
.... .-...|+.++++|.+..++ + .+-.... +...||..+.+=+.. .|.++...|
T Consensus 141 ~~~~---~f~~GGaG~vlSr~~~~k~~~~~~~~~~~~~~~~~~~~dD~~lG~ci~~~lgv~lt~s~ 203 (252)
T PF02434_consen 141 DSGF---WFATGGAGYVLSRALLKKMSPWASGCKCPSTDEKIRLPDDMTLGYCIENLLGVPLTHSP 203 (252)
T ss_dssp --------EE-GGG-EEEEHHHHHHHHHHHTT-TTS--TTTTTS-HHHHHHHHHHHTT---EEE-T
T ss_pred cCce---EeeCCCeeHHHhHHHHHHHhhhcccccccCCcCCCCCcccChhhhhHHhcCCcceeech
Confidence 0000 1124456789999999998 2 2211111 123699999988888 887765554
No 241
>cd02523 PC_cytidylyltransferase Phosphocholine cytidylyltransferases catalyze the synthesis of CDP-choline. This family contains proteins similar to prokaryotic phosphocholine (P-cho) cytidylyltransferases. Phosphocholine (PC) cytidylyltransferases catalyze the transfer of a cytidine monophosphate from CTP to phosphocholine to form CDP-choline. PC is the most abundant phospholipid in eukaryotic membranes and it is also important in prokaryotic membranes. For pathogenic prokaryotes, the cell surface PC facilitates the interaction with host surface and induces attachment and invasion. In addition cell wall PC serves as scaffold for a group of choline-binding proteins that are secreted from the cells. Phosphocholine (PC) cytidylyltransferase is a key enzyme in the prokaryotic choline metabolism pathway. It has been hypothesized to consist of a choline transport system, a choline kinase, CTP:phosphocholine cytidylyltransferase, and a choline phosphotransferase that transfers P-Cho from CDP
Probab=65.61 E-value=43 Score=32.37 Aligned_cols=83 Identities=18% Similarity=0.288 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCC--CCChHHHHHHHHhhccCCEEEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG--RVGLIKARLLGARQAEGEILVF 289 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~--n~G~~~arN~G~~~A~gd~i~f 289 (605)
+.+...|.++.+... .+|+||-.. ..+ .+.++..... .+.++.++. ..|.+.+...|.... .+.+++
T Consensus 30 ~li~~~l~~l~~~gi----~~i~vv~~~-~~~----~~~~~~~~~~-~~~~~~~~~~~~~g~~~s~~~~~~~~-~~~~lv 98 (229)
T cd02523 30 PLLERQIETLKEAGI----DDIVIVTGY-KKE----QIEELLKKYP-NIKFVYNPDYAETNNIYSLYLARDFL-DEDFLL 98 (229)
T ss_pred EHHHHHHHHHHHCCC----ceEEEEecc-CHH----HHHHHHhccC-CeEEEeCcchhhhCcHHHHHHHHHHc-CCCEEE
Confidence 567777777766422 477776443 222 2334443322 677777654 478888888887776 577888
Q ss_pred ecCCcccCcChHHHHH
Q psy10463 290 LDAHCECTLGWLENLV 305 (605)
Q Consensus 290 lD~D~~~~~~~L~~ll 305 (605)
+++|..+.++.++.++
T Consensus 99 ~~~D~~~~~~~~~~~~ 114 (229)
T cd02523 99 LEGDVVFDPSILERLL 114 (229)
T ss_pred EeCCEecCHHHHHHHH
Confidence 9999988876666554
No 242
>PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional
Probab=65.32 E-value=64 Score=30.64 Aligned_cols=85 Identities=16% Similarity=0.216 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCC-CCChHHHHHHHHhhccCCEEEEe
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG-RVGLIKARLLGARQAEGEILVFL 290 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~-n~G~~~arN~G~~~A~gd~i~fl 290 (605)
..+..++..+... . .+|+||-.. .+ ....+. ...++++.... ..|...+.-.|++....++++++
T Consensus 34 ~ll~~~i~~l~~~-~----~~ivvv~~~--~~----~~~~~~---~~~~~~i~~~~~~~G~~~si~~~l~~~~~~~vlv~ 99 (200)
T PRK02726 34 PLLQRVARIAAAC-A----DEVYIITPW--PE----RYQSLL---PPGCHWLREPPPSQGPLVAFAQGLPQIKTEWVLLL 99 (200)
T ss_pred eHHHHHHHHHHhh-C----CEEEEECCC--HH----HHHhhc---cCCCeEecCCCCCCChHHHHHHHHHhCCCCcEEEE
Confidence 4666777766532 1 367776431 11 111221 12577776544 36888899999998888999999
Q ss_pred cCCcc-cCcChHHHHHHHHHc
Q psy10463 291 DAHCE-CTLGWLENLVARVAE 310 (605)
Q Consensus 291 D~D~~-~~~~~L~~ll~~~~~ 310 (605)
++|.- ++++.++.|++....
T Consensus 100 ~~D~P~i~~~~i~~l~~~~~~ 120 (200)
T PRK02726 100 ACDLPRLTVDVLQEWLQQLEN 120 (200)
T ss_pred eCCCCCCCHHHHHHHHHHhhc
Confidence 99997 489999999998765
No 243
>PF03360 Glyco_transf_43: Glycosyltransferase family 43; InterPro: IPR005027 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 43 GT43 from CAZY comprises enzymes with only one known activities; beta-glucuronyltransferase(2.4.1 from EC);.; GO: 0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity, 0016020 membrane; PDB: 2D0J_B 3CU0_A 1FGG_B 1KWS_B 1V84_B 1V83_B 1V82_A.
Probab=63.15 E-value=13 Score=35.67 Aligned_cols=70 Identities=11% Similarity=0.168 Sum_probs=38.6
Q ss_pred eeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCC----------hHHHHHHHHhhcc-------CCEEEEecCC
Q psy10463 231 KEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVG----------LIKARLLGARQAE-------GEILVFLDAH 293 (605)
Q Consensus 231 ~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G----------~~~arN~G~~~A~-------gd~i~flD~D 293 (605)
.--|||+|++.... .+.++.++.+...+++..+.... -...||.|++.-+ .-+|.|.|+|
T Consensus 11 l~WIVVEd~~~~~~---~v~~lL~~sgl~y~hL~~~~p~~~~~~~~~~~rg~~qRn~AL~~ir~~~~~~~~GVVyFaDDd 87 (207)
T PF03360_consen 11 LHWIVVEDSEETTP---LVARLLRRSGLPYTHLNVKTPSNFKDPRWIKPRGVHQRNAALRWIRNNANHRLDGVVYFADDD 87 (207)
T ss_dssp EEEEEEESSSS--H---HHHHHHHHHTSEEEEEE----HHHH-------TSHHHHHHHHHHHHSTTTSSS-EEEEE--TT
T ss_pred eEEEEEeCCCCCCH---HHHHHHHHcCCceeEEecCCccccccccccccccHHHHHHHHHHHHhcccCCCCcEEEECCCC
Confidence 57899999876543 34455555543444444443111 1347999986654 4689999999
Q ss_pred cccCcChHHH
Q psy10463 294 CECTLGWLEN 303 (605)
Q Consensus 294 ~~~~~~~L~~ 303 (605)
...+-..+++
T Consensus 88 NtYdl~LF~e 97 (207)
T PF03360_consen 88 NTYDLRLFDE 97 (207)
T ss_dssp SEE-HHHHHH
T ss_pred CeeeHHHHHH
Confidence 8877655555
No 244
>PRK14356 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=62.78 E-value=2.3e+02 Score=30.67 Aligned_cols=87 Identities=8% Similarity=0.034 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhc---cCCEEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQA---EGEILV 288 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A---~gd~i~ 288 (605)
+.+...++.+.... . .+|++|-.... + .++++... ..++++.++...|.+.+.-.++... ..+.++
T Consensus 34 pli~~~l~~l~~~~-~---~~iivv~~~~~-~----~i~~~~~~--~~~~~v~~~~~~Gt~~al~~a~~~l~~~~~d~vl 102 (456)
T PRK14356 34 PMLRFVYRALRPLF-G---DNVWTVVGHRA-D----MVRAAFPD--EDARFVLQEQQLGTGHALQCAWPSLTAAGLDRVL 102 (456)
T ss_pred cHHHHHHHHHHhcC-C---CcEEEEECCCH-H----HHHHhccc--cCceEEEcCCCCCcHHHHHHHHHHHhhcCCCcEE
Confidence 56777777665432 1 36766543221 2 23333322 1577777777778777766665443 358899
Q ss_pred EecCCc-ccCcChHHHHHHHHH
Q psy10463 289 FLDAHC-ECTLGWLENLVARVA 309 (605)
Q Consensus 289 flD~D~-~~~~~~L~~ll~~~~ 309 (605)
++++|. .+++..++.+++...
T Consensus 103 v~~gD~P~i~~~~i~~li~~~~ 124 (456)
T PRK14356 103 VVNGDTPLVTTDTIDDFLKEAA 124 (456)
T ss_pred EEeCCcccCCHHHHHHHHHHHh
Confidence 999998 578889999998765
No 245
>PRK14352 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=62.55 E-value=91 Score=34.19 Aligned_cols=94 Identities=18% Similarity=0.145 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhcc---CCEEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAE---GEILV 288 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~---gd~i~ 288 (605)
+.|...|+++.+... .++++|-... .+. +.++.......+.++..+...|.+.+.-.|+.... .+.++
T Consensus 33 pli~~~l~~l~~~g~----~~iivvv~~~-~~~----i~~~~~~~~~~~~~~~~~~~~Gt~~si~~al~~l~~~~~~~vl 103 (482)
T PRK14352 33 SMLGHVLHAAAGLAP----QHLVVVVGHD-RER----VAPAVAELAPEVDIAVQDEQPGTGHAVQCALEALPADFDGTVV 103 (482)
T ss_pred cHHHHHHHHHHhcCC----CcEEEEECCC-HHH----HHHHhhccCCccEEEeCCCCCCcHHHHHHHHHHhccCCCCeEE
Confidence 467777777765432 3555553322 222 23333332224666666666788877777776643 36788
Q ss_pred EecCCc-ccCcChHHHHHHHHHcCCcE
Q psy10463 289 FLDAHC-ECTLGWLENLVARVAEDRTR 314 (605)
Q Consensus 289 flD~D~-~~~~~~L~~ll~~~~~~~~~ 314 (605)
++++|. .+.+..|+.|++...+....
T Consensus 104 V~~gD~P~~~~~~l~~li~~~~~~~~~ 130 (482)
T PRK14352 104 VTAGDVPLLDGETLADLVATHTAEGNA 130 (482)
T ss_pred EEeCCeeccCHHHHHHHHHHHHhcCCe
Confidence 899998 46888999999987665443
No 246
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=61.68 E-value=1.1e+02 Score=29.86 Aligned_cols=102 Identities=20% Similarity=0.230 Sum_probs=59.6
Q ss_pred EEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCC---------CC--
Q psy10463 202 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGR---------VG-- 270 (605)
Q Consensus 202 VIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n---------~G-- 270 (605)
|++.+-+.-...+..++.|++..+... ...|.|+.++-++.. .+.++++.......|+++..+.. ..
T Consensus 3 I~~~~d~~y~~~~~~~l~Sl~~~~~~~-~~~~~il~~~is~~~-~~~L~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~ 80 (248)
T cd04194 3 IVFAIDDNYAPYLAVTIKSILANNSKR-DYDFYILNDDISEEN-KKKLKELLKKYNSSIEFIKIDNDDFKFFPATTDHIS 80 (248)
T ss_pred EEEEecHhhHHHHHHHHHHHHhcCCCC-ceEEEEEeCCCCHHH-HHHHHHHHHhcCCeEEEEEcCHHHHhcCCccccccc
Confidence 444444443477888999999877632 267777777765553 44666666554445666544320 01
Q ss_pred -hHHHHHHHHhhc-cCCEEEEecCCcccCcChHHHHHH
Q psy10463 271 -LIKARLLGARQA-EGEILVFLDAHCECTLGWLENLVA 306 (605)
Q Consensus 271 -~~~arN~G~~~A-~gd~i~flD~D~~~~~~~L~~ll~ 306 (605)
..-+|-.....- .-+-+++||+|+.+..+ +..|.+
T Consensus 81 ~~~y~rl~l~~ll~~~~rvlylD~D~lv~~d-i~~L~~ 117 (248)
T cd04194 81 YATYYRLLIPDLLPDYDKVLYLDADIIVLGD-LSELFD 117 (248)
T ss_pred HHHHHHHHHHHHhcccCEEEEEeCCEEecCC-HHHHhc
Confidence 122233333333 37889999999988554 455554
No 247
>cd00218 GlcAT-I Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43).
Probab=61.67 E-value=62 Score=31.41 Aligned_cols=88 Identities=17% Similarity=0.251 Sum_probs=52.4
Q ss_pred CcEEEEEEeecCch--HHHHHHHHHHHhcCCccCcceEEEEeCCC-chhhHHHHHHHHHHhcCCCeEEeecCCC------
Q psy10463 90 PKSSIVIVFHNEAW--SALLRTVHSVISRSPRSMLKEILLVDDAS-TREFLKSSLDEYVAKLSVPTRVIRSPGR------ 160 (605)
Q Consensus 90 p~~Siiip~yN~~~--~~l~~~l~sv~~~~~~~~~~EiivvdD~S-~d~~~~~~~~~~~~~~~~~v~~~~~~~~------ 160 (605)
|.+-||.|+|.... ..|.+.-+.+.. -+ + .=+|||+|+. .-.. ..+.+++.+-..+.+..+.+
T Consensus 1 p~i~vVTPTy~R~~Q~~~LtRLa~TL~l-Vp-~--l~WIVVEd~~~~t~~----va~lL~~sgl~y~HL~~~~~~~~~~~ 72 (223)
T cd00218 1 PTIYVVTPTYARPVQKAELTRLAHTLRL-VP-P--LHWIVVEDSEEKTPL----VAELLRRSGLMYTHLNAKTPSDPTWL 72 (223)
T ss_pred CeEEEECCCCccchhhHHHHHHHHHHhc-CC-c--eEEEEEeCCCCCCHH----HHHHHHHcCCceEEeccCCCCCcccC
Confidence 56889999998753 445554444443 33 4 5899999998 3333 44555555444444433322
Q ss_pred --cchHHHHHHHhhhccC-------ceEEEecCcc
Q psy10463 161 --VGLIKARLLGARQAEG-------EILVFLDAHC 186 (605)
Q Consensus 161 --~G~~~a~n~g~~~a~g-------~~i~~lD~d~ 186 (605)
.| ...||.|++.-+. -++.|.|.|.
T Consensus 73 ~~rg-~~qRn~AL~~ir~~~~~~~~GVVyFADDdN 106 (223)
T cd00218 73 KPRG-VEQRNLALRWIREHLSAKLDGVVYFADDDN 106 (223)
T ss_pred Cccc-HHHHHHHHHHHHhccccCcceEEEEccCCC
Confidence 23 4678999887643 3456666555
No 248
>PLN02458 transferase, transferring glycosyl groups
Probab=59.99 E-value=56 Score=33.48 Aligned_cols=93 Identities=19% Similarity=0.129 Sum_probs=55.3
Q ss_pred CCCCcEEEEEEeecC-c--hHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCc--
Q psy10463 87 EFLPKSSIVIVFHNE-A--WSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRV-- 161 (605)
Q Consensus 87 ~~~p~~Siiip~yN~-~--~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~-- 161 (605)
...+.+-||.|+|.. . ...|.+.-+.+ ...+++ .=+|||+|++.-.. +.+.+++.+-..+.+..+.+.
T Consensus 109 ~~~rlIivVTPTY~rR~~Q~a~LTRLahTL-~lVp~p--L~WIVVEd~~~t~~----va~lLrrsGl~y~HL~~k~~~~~ 181 (346)
T PLN02458 109 APRRLVIIVTPISTKDRYQGVLLRRLANTL-RLVPPP--LLWIVVEGQSDSEE----VSEMLRKTGIMYRHLVFKENFTD 181 (346)
T ss_pred CCCceEEEECCCCCCcchhHHHHHHHHHHH-hcCCCC--ceEEEEeCCCCCHH----HHHHHHHcCCceEEeccCCCCCC
Confidence 345679999999983 2 14455544444 444445 47899998874443 455555555444444433332
Q ss_pred ---chHHHHHHHhhhcc----CceEEEecCcc
Q psy10463 162 ---GLIKARLLGARQAE----GEILVFLDAHC 186 (605)
Q Consensus 162 ---G~~~a~n~g~~~a~----g~~i~~lD~d~ 186 (605)
.....||.|++.-+ .-++.|.|.|.
T Consensus 182 ~~~r~~~QRN~AL~~IR~h~l~GVVyFADDdN 213 (346)
T PLN02458 182 PEAELDHQRNLALRHIEHHKLSGIVHFAGLSN 213 (346)
T ss_pred ccchhHHHHHHHHHHHHhcCcCceEEEccCCC
Confidence 22567999998874 34556666555
No 249
>KOG1022|consensus
Probab=59.48 E-value=33 Score=37.24 Aligned_cols=107 Identities=20% Similarity=0.170 Sum_probs=74.1
Q ss_pred CcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCC----CChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHH
Q psy10463 198 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDA----STREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIK 273 (605)
Q Consensus 198 p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~----S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~ 273 (605)
...+.|+-||++- +.|...|.....- |. +.+|+||=|+ ..++.++ ...+.++++..+.+|. -.
T Consensus 443 qgFTlim~TYdR~-d~L~k~v~~ys~v--Ps-L~kIlVVWNnq~k~PP~es~~-------~~~~VPlr~r~qkeNs--Ln 509 (691)
T KOG1022|consen 443 QGFTLIMLTYDRV-DLLKKLVKHYSRV--PS-LKKILVVWNNQGKNPPPESLE-------PDIAVPLRFRQQKENS--LN 509 (691)
T ss_pred cceeeeeehHHHH-HHHHHHHHHHhhC--CC-cceEEEEecCCCCCCChhhcc-------ccCCccEEEEehhhhh--hh
Confidence 3488999999988 7888777766432 22 3799999663 2333222 1222467777666642 12
Q ss_pred HHHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEe
Q psy10463 274 ARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVC 317 (605)
Q Consensus 274 arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~ 317 (605)
.|-.-...-..+-|+-+|+|++++-+-|+--.+-.++.|+.+|+
T Consensus 510 NRF~~~peieT~AVL~IDDDIim~~ddldFgf~VWrefPD~lVG 553 (691)
T KOG1022|consen 510 NRFEPYPEIETEAVLEIDDDIIMPCDDLDFGFEVWREFPDRLVG 553 (691)
T ss_pred cccccCcccccceeEEecCceeeecchhHHHHHHHHhCccceec
Confidence 22233455678999999999999999999999999999987776
No 250
>TIGR00453 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase. Members of this protein family are 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, the IspD protein of the deoxyxylulose pathway of IPP biosynthesis. In about twenty percent of bacterial genomes, this protein occurs as IspDF, a bifunctional fusion protein.
Probab=59.20 E-value=1.1e+02 Score=29.14 Aligned_cols=91 Identities=13% Similarity=0.215 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhc-cCCEEEEe
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQA-EGEILVFL 290 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A-~gd~i~fl 290 (605)
+.+..+++.+...... .+|+||-+..... .+........ .+.++.... +...+...|+... ..++++++
T Consensus 28 pll~~~l~~l~~~~~~---~~ivVv~~~~~~~----~~~~~~~~~~-~~~~~~~~~--~~~~sl~~~l~~~~~~d~vlv~ 97 (217)
T TIGR00453 28 PLLEHTLDAFLAHPAI---DEVVVVVSPEDQE----FFQKYLVARA-VPKIVAGGD--TRQDSVRNGLKALKDAEWVLVH 97 (217)
T ss_pred EHHHHHHHHHhcCCCC---CEEEEEEChHHHH----HHHHHhhcCC-cEEEeCCCc--hHHHHHHHHHHhCCCCCEEEEc
Confidence 5677777777653121 4777774322111 1222222111 345553322 3455666777766 67899999
Q ss_pred cCCcc-cCcChHHHHHHHHHcCC
Q psy10463 291 DAHCE-CTLGWLENLVARVAEDR 312 (605)
Q Consensus 291 D~D~~-~~~~~L~~ll~~~~~~~ 312 (605)
++|.- ++++.++.+++.+.+..
T Consensus 98 ~~D~P~i~~~~i~~li~~~~~~~ 120 (217)
T TIGR00453 98 DAARPFVPKELLDRLLEALRKAG 120 (217)
T ss_pred cCccCCCCHHHHHHHHHHHhhCC
Confidence 99996 69999999999887653
No 251
>TIGR01173 glmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. This protein is a bifunctional enzyme, GlmU, which catalyzes last two reactions in the four-step pathway of UDP-N-acetylglucosamine biosynthesis from fructose-6-phosphate. Its reaction product is required from peptidoglycan biosynthesis, LPS biosynthesis in species with LPS, and certain other processes.
Probab=59.04 E-value=74 Score=34.36 Aligned_cols=90 Identities=14% Similarity=0.098 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhcc-CCEEEEe
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAE-GEILVFL 290 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~-gd~i~fl 290 (605)
+.+..+++.+.+... .+++++-.. ..+. +.++.... .+.++..+...|.+.+...++.... .+.++++
T Consensus 29 pli~~~l~~l~~~g~----~~iiiv~~~-~~~~----i~~~~~~~--~i~~~~~~~~~G~~~ai~~a~~~l~~~~~~lv~ 97 (451)
T TIGR01173 29 PMLEHVIDAARALGP----QKIHVVYGH-GAEQ----VRKALANR--DVNWVLQAEQLGTGHAVLQALPFLPDDGDVLVL 97 (451)
T ss_pred cHHHHHHHHHHhCCC----CeEEEEECC-CHHH----HHHHhcCC--CcEEEEcCCCCchHHHHHHHHHhcCCCCcEEEE
Confidence 567777777765432 365555332 2222 33333333 4666766666787777777777653 4789999
Q ss_pred cCCc-ccCcChHHHHHHHHHcCC
Q psy10463 291 DAHC-ECTLGWLENLVARVAEDR 312 (605)
Q Consensus 291 D~D~-~~~~~~L~~ll~~~~~~~ 312 (605)
++|. .+.+..++.+++...+..
T Consensus 98 ~~D~p~i~~~~~~~l~~~~~~~~ 120 (451)
T TIGR01173 98 YGDVPLISAETLERLLEAHRQNG 120 (451)
T ss_pred ECCcCCcCHHHHHHHHHHHhhCC
Confidence 9998 568889999998876543
No 252
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase. Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane
Probab=58.88 E-value=62 Score=35.72 Aligned_cols=101 Identities=16% Similarity=0.110 Sum_probs=67.3
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHHhc---CCccCcceEEEEeCCC-chh----hHHHHHHHHHHhcC-CCeEEeec
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVISR---SPRSMLKEILLVDDAS-TRE----FLKSSLDEYVAKLS-VPTRVIRS 157 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~~~---~~~~~~~EiivvdD~S-~d~----~~~~~~~~~~~~~~-~~v~~~~~ 157 (605)
..-..|-||||..+.+.+.+.+=|+....- +..+ .-++||-.++ .|. .+++.++++.++.+ .++.++..
T Consensus 244 ~~~~~V~iIvPl~~r~~~~~~~Fl~~~~~~~l~~~~~--~~L~vV~~~~~~~~~~~~~ik~~l~~l~~k~~~~~i~~i~~ 321 (499)
T PF05679_consen 244 TESTRVHIIVPLSGREADWFRRFLENFEKVCLETDDN--VFLTVVLFYDPSDSDSISQIKELLEELERKYPFSRIKWISV 321 (499)
T ss_pred cCCCEEEEEEEecCccHHHHHHHHHHHHHHhcccCCc--eEEEEEEecCcccchhHHHHHHHHHHHHHhCCccceEEEEe
Confidence 334789999999999336666666554332 2222 4666666665 332 23456777776663 34888888
Q ss_pred C-CCcchHHHHHHHhhhcc-CceEEEecCccccc
Q psy10463 158 P-GRVGLIKARLLGARQAE-GEILVFLDAHCECT 189 (605)
Q Consensus 158 ~-~~~G~~~a~n~g~~~a~-g~~i~~lD~d~~~~ 189 (605)
. ...-.+.|...|++... ...++|.|.|...+
T Consensus 322 ~~~~fsr~~~Ld~g~~~~~~d~L~f~~Dvd~~f~ 355 (499)
T PF05679_consen 322 KTGEFSRGAALDVGAKKFPPDSLLFFCDVDMVFT 355 (499)
T ss_pred cCCCccHHHHHHhhcccCCCCcEEEEEeCCcccC
Confidence 7 77777888889988664 45677888888765
No 253
>cd02516 CDP-ME_synthetase CDP-ME synthetase is involved in mevalonate-independent isoprenoid production. 4-diphosphocytidyl-2-methyl-D-erythritol synthase (CDP-ME), also called 2C-methyl-d-erythritol 4-phosphate cytidylyltransferase catalyzes the third step in the alternative (non-mevalonate) pathway of Isopentenyl diphosphate (IPP) biosynthesis: the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate. This mevalonate independent pathway that utilizes pyruvate and glyceraldehydes 3-phosphate as starting materials for production of IPP occurs in a variety of bacteria, archaea and plant cells, but is absent in mammals. Thus, CDP-ME synthetase is an attractive targets for the structure-based design of selective antibacterial, herbicidal and antimalarial drugs.
Probab=58.52 E-value=94 Score=29.58 Aligned_cols=93 Identities=16% Similarity=0.223 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHH-HCCCCEEEEeCCCCCChHHHHHHHHhhc---cCCEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVA-KLSVPTRVIRSPGRVGLIKARLLGARQA---EGEIL 287 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~-~~~~~v~~i~~~~n~G~~~arN~G~~~A---~gd~i 287 (605)
+.+..+++.+...... .+|+||-+..... ....+.. .....+.++..+ .|...+...|++.. ..+++
T Consensus 29 pll~~~i~~l~~~~~~---~~ivVv~~~~~~~----~~~~~~~~~~~~~~~~~~~~--~~~~~si~~al~~~~~~~~~~v 99 (218)
T cd02516 29 PVLEHTLEAFLAHPAI---DEIVVVVPPDDID----LAKELAKYGLSKVVKIVEGG--ATRQDSVLNGLKALPDADPDIV 99 (218)
T ss_pred EHHHHHHHHHhcCCCC---CEEEEEeChhHHH----HHHHHHhcccCCCeEEECCc--hHHHHHHHHHHHhcccCCCCEE
Confidence 5777777777653222 3677664332211 1222111 112245555433 35566777787765 57899
Q ss_pred EEecCCcc-cCcChHHHHHHHHHcCCc
Q psy10463 288 VFLDAHCE-CTLGWLENLVARVAEDRT 313 (605)
Q Consensus 288 ~flD~D~~-~~~~~L~~ll~~~~~~~~ 313 (605)
+++++|.- +.++.++.+++.+.+...
T Consensus 100 lv~~~D~P~i~~~~i~~li~~~~~~~~ 126 (218)
T cd02516 100 LIHDAARPFVSPELIDRLIDALKEYGA 126 (218)
T ss_pred EEccCcCCCCCHHHHHHHHHHHhhCCc
Confidence 99999987 599999999998866543
No 254
>PRK00155 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Reviewed
Probab=58.13 E-value=1.5e+02 Score=28.46 Aligned_cols=92 Identities=16% Similarity=0.157 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhc-cCCEEEEe
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQA-EGEILVFL 290 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A-~gd~i~fl 290 (605)
+.+..+++.+...... .+|+||-+... .....+.+..... ++.++.... +.+.+.-.|+... ..++++++
T Consensus 32 pli~~~l~~l~~~~~~---~~ivvv~~~~~---~~~~~~~~~~~~~-~~~~~~~~~--~~~~sv~~~l~~~~~~d~vlv~ 102 (227)
T PRK00155 32 PILEHTLEAFLAHPRI---DEIIVVVPPDD---RPDFAELLLAKDP-KVTVVAGGA--ERQDSVLNGLQALPDDDWVLVH 102 (227)
T ss_pred EHHHHHHHHHHcCCCC---CEEEEEeChHH---HHHHHHHhhccCC-ceEEeCCcc--hHHHHHHHHHHhCCCCCEEEEc
Confidence 5677777777653222 37777644222 1112222221111 455554322 4566666777665 57899999
Q ss_pred cCCcc-cCcChHHHHHHHHHcCC
Q psy10463 291 DAHCE-CTLGWLENLVARVAEDR 312 (605)
Q Consensus 291 D~D~~-~~~~~L~~ll~~~~~~~ 312 (605)
|+|.- ++++.++.+++.+.++.
T Consensus 103 ~~D~P~i~~~~i~~li~~~~~~~ 125 (227)
T PRK00155 103 DAARPFLTPDDIDRLIEAAEETG 125 (227)
T ss_pred cCccCCCCHHHHHHHHHHHhhCC
Confidence 99986 69999999999887654
No 255
>PLN02190 cellulose synthase-like protein
Probab=57.99 E-value=23 Score=40.50 Aligned_cols=55 Identities=16% Similarity=0.088 Sum_probs=45.7
Q ss_pred cCCcceEEEEeec---hhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHH
Q psy10463 196 FLPKSSIVIVFHN---EAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLD 250 (605)
Q Consensus 196 ~~p~vSVIIp~~n---~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~ 250 (605)
.+|.|.|.|+|+| |+......++.|+++-+||....-+.|-|||...-+.....|
T Consensus 91 ~Lp~VDvFV~TaDP~kEPpl~v~nTvLSilA~dYP~eklscYvSDDG~s~LT~~al~E 148 (756)
T PLN02190 91 DLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKE 148 (756)
T ss_pred cCCcceEEEecCCCCcCCHHHHHHHHHHHHhccCCccccceEEecCCCcHhHHHHHHH
Confidence 4899999999999 875677899999999999987678899999988766554444
No 256
>PF01697 Glyco_transf_92: Glycosyltransferase family 92; InterPro: IPR008166 This entry represents a region approximately 300 residues long that is of unknown function. The aligned region contains several conserved cysteine residues and several charged residues that may be catalytic residues.
Probab=57.83 E-value=63 Score=32.31 Aligned_cols=107 Identities=18% Similarity=0.163 Sum_probs=64.6
Q ss_pred ceEEE-Eeec-hh-hHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCC---------
Q psy10463 200 SSIVI-VFHN-EA-WSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG--------- 267 (605)
Q Consensus 200 vSVII-p~~n-~~-~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~--------- 267 (605)
++|++ |.|. +. +..+.+-|+.....-- .-+.+-+..+++. +.++|+.|.+. +.|.++.-+.
T Consensus 3 ~~vCv~pl~~~~~~~~~l~e~ie~~~~~G~----~~~~~Y~~~~~~~-~~~vL~~Y~~~--g~v~~~~w~~~~~~~~~~~ 75 (285)
T PF01697_consen 3 FVVCVSPLFGNEDDWLQLIEWIEYHRLLGV----DHFYFYDNSSSPS-VRKVLKEYERS--GYVEVIPWPLRPKFPDFPS 75 (285)
T ss_pred EEEEccchhcccccHHHHHHHHHHHHHhCC----CEEEEEEccCCHH-HHHhHHHHhhc--CeEEEEEcccccccCCccc
Confidence 45555 3444 43 2356666665554421 3666667777665 67788888775 2677766641
Q ss_pred ----------CCChHHHHHHHHhhc--cCCEEEEecCCcccCcC----hHHHHHHHHHcCCc
Q psy10463 268 ----------RVGLIKARLLGARQA--EGEILVFLDAHCECTLG----WLENLVARVAEDRT 313 (605)
Q Consensus 268 ----------n~G~~~arN~G~~~A--~gd~i~flD~D~~~~~~----~L~~ll~~~~~~~~ 313 (605)
..|-..|.|-.+... ..+|++|+|-|..+-|. +.+.+...+++...
T Consensus 76 ~~~~~~~~~~~~~q~~a~~DCl~r~~~~~~~v~f~DiDE~lvP~~~~~~~~~~~~~l~~~~~ 137 (285)
T PF01697_consen 76 PFPDPNSSVERRGQIAAYNDCLLRYRYRAKWVAFIDIDEFLVPTNAPTYPEEFEDLLREFPN 137 (285)
T ss_pred chhhhhhHHHHHHHHHHHHHHHHHhhhhceEEEEeccccEEEeccccchhhHHHHHHhhccc
Confidence 123345555555444 56899999999886433 47777777766543
No 257
>PRK14358 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=57.24 E-value=1.2e+02 Score=33.37 Aligned_cols=91 Identities=16% Similarity=0.168 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhcc---CCEEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAE---GEILV 288 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~---gd~i~ 288 (605)
+.|...|..+.+... .+|+||-... .+ .++++... ..+.++..+...|.+.+.-.|+.... .+ ++
T Consensus 36 pli~~~l~~l~~~gi----~~ivvv~~~~-~~----~i~~~~~~--~~i~~v~~~~~~Gt~~al~~~~~~l~~~~~~-~l 103 (481)
T PRK14358 36 PMVAWAVKAARDLGA----RKIVVVTGHG-AE----QVEAALQG--SGVAFARQEQQLGTGDAFLSGASALTEGDAD-IL 103 (481)
T ss_pred eHHHHHHHHHHhCCC----CeEEEEeCCC-HH----HHHHHhcc--CCcEEecCCCcCCcHHHHHHHHHHhhCCCCc-EE
Confidence 577777777765422 4777764432 22 23344332 25788887777888888777766542 34 56
Q ss_pred EecCCc-ccCcChHHHHHHHHHcCCcE
Q psy10463 289 FLDAHC-ECTLGWLENLVARVAEDRTR 314 (605)
Q Consensus 289 flD~D~-~~~~~~L~~ll~~~~~~~~~ 314 (605)
++++|. .+.+..++.|++...+....
T Consensus 104 V~~gD~P~i~~~~l~~ll~~~~~~~~~ 130 (481)
T PRK14358 104 VLYGDTPLLRPDTLRALVADHRAQGSA 130 (481)
T ss_pred EEeCCeeccCHHHHHHHHHHHHhcCCe
Confidence 789998 56788899999887665543
No 258
>PRK14489 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobA/MobB; Provisional
Probab=56.76 E-value=89 Score=32.96 Aligned_cols=50 Identities=18% Similarity=0.286 Sum_probs=40.4
Q ss_pred CChHHHHHHHHhhccCCEEEEecCCcc-cCcChHHHHHHHHHcCCcEEEee
Q psy10463 269 VGLIKARLLGARQAEGEILVFLDAHCE-CTLGWLENLVARVAEDRTRVVCP 318 (605)
Q Consensus 269 ~G~~~arN~G~~~A~gd~i~flD~D~~-~~~~~L~~ll~~~~~~~~~vv~p 318 (605)
.|...+.-.|++....++++++++|.- ++++.++.+++.+......++.|
T Consensus 78 ~G~~~si~~gl~~~~~~~vlv~~~D~P~i~~~~i~~L~~~~~~~~~~~v~~ 128 (366)
T PRK14489 78 QGPLSGILAGLEHADSEYLFVVACDTPFLPENLVKRLSKALAIEGADIAVP 128 (366)
T ss_pred CChHHHHHHHHHhcCCCcEEEeeCCcCCCCHHHHHHHHHHhhccCCeEEEE
Confidence 477788888888888899999999975 69999999999876655555554
No 259
>PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional
Probab=56.20 E-value=1.3e+02 Score=31.84 Aligned_cols=90 Identities=11% Similarity=0.135 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhccCCEEEEec
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLD 291 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~gd~i~flD 291 (605)
+.+..+++.+.....- .+|+||-+..... ..+.+..... .++++... .+...+.-.|++....+++++.|
T Consensus 34 Pll~~tl~~l~~~~~i---~~IvVVv~~~~~~----~~~~~~~~~~-~v~~v~gG--~~r~~SV~~gL~~l~~d~VLVhd 103 (378)
T PRK09382 34 PLWLHVLENLSSAPAF---KEIVVVIHPDDIA----YMKKALPEIK-FVTLVTGG--ATRQESVRNALEALDSEYVLIHD 103 (378)
T ss_pred eHHHHHHHHHhcCCCC---CeEEEEeChHHHH----HHHHhcccCC-eEEEeCCC--chHHHHHHHHHHhcCCCeEEEee
Confidence 5677777777654321 3677764322111 2222222222 24444322 23445566677766679999999
Q ss_pred CCcc-cCcChHHHHHHHHHcC
Q psy10463 292 AHCE-CTLGWLENLVARVAED 311 (605)
Q Consensus 292 ~D~~-~~~~~L~~ll~~~~~~ 311 (605)
+|.- ++++.++.+++.+.+.
T Consensus 104 adrPfv~~e~I~~li~~~~~~ 124 (378)
T PRK09382 104 AARPFVPKELIDRLIEALDKA 124 (378)
T ss_pred ccccCCCHHHHHHHHHHhhcC
Confidence 9975 5899999999987654
No 260
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=56.08 E-value=1.9e+02 Score=30.09 Aligned_cols=107 Identities=12% Similarity=0.095 Sum_probs=67.0
Q ss_pred CcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCC--------CC
Q psy10463 198 PKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG--------RV 269 (605)
Q Consensus 198 p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~--------n~ 269 (605)
+.+.|+..+-+.-...+.-+|.|++...+.. .+.+.|++|+-+++. .+.++++...++..+.++.-.. ..
T Consensus 24 ~~i~Iv~~~D~ny~~~~~vsi~Sil~nn~~~-~~~f~Il~~~is~e~-~~~l~~l~~~~~~~i~~~~id~~~~~~~~~~~ 101 (334)
T PRK15171 24 NSLDIAYGIDKNFLFGCGVSIASVLLNNPDK-SLVFHVFTDYISDAD-KQRFSALAKQYNTRINIYLINCERLKSLPSTK 101 (334)
T ss_pred CceeEEEECcHhhHHHHHHHHHHHHHhCCCC-CEEEEEEeCCCCHHH-HHHHHHHHHhcCCeEEEEEeCHHHHhCCcccC
Confidence 4566666665555578899999999764332 368888888766654 3457777777665666554321 11
Q ss_pred Ch---HHHHHHHHhhc--cCCEEEEecCCcccCcChHHHHHHH
Q psy10463 270 GL---IKARLLGARQA--EGEILVFLDAHCECTLGWLENLVAR 307 (605)
Q Consensus 270 G~---~~arN~G~~~A--~gd~i~flD~D~~~~~~~L~~ll~~ 307 (605)
.. +-+|-.....- .-+-++.||+|+++.. -|.+|...
T Consensus 102 ~~s~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~-dl~~L~~~ 143 (334)
T PRK15171 102 NWTYATYFRFIIADYFIDKTDKVLYLDADIACKG-SIKELIDL 143 (334)
T ss_pred cCCHHHHHHHHHHHhhhhhcCEEEEeeCCEEecC-CHHHHHhc
Confidence 11 22244343432 4788999999998855 45666654
No 261
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=55.89 E-value=14 Score=34.51 Aligned_cols=33 Identities=15% Similarity=0.090 Sum_probs=27.3
Q ss_pred cchHHHHHHHhhh-ccCceEEEecCccccccccc
Q psy10463 161 VGLIKARLLGARQ-AEGEILVFLDAHCECTLVFN 193 (605)
Q Consensus 161 ~G~~~a~n~g~~~-a~g~~i~~lD~d~~~~~~~~ 193 (605)
.++..+...+++. |++++++++|+|..++++|+
T Consensus 16 N~Kv~nL~~~~~~~a~~d~~~~~DsDi~v~p~~L 49 (175)
T PF13506_consen 16 NPKVNNLAQGLEAGAKYDYLVISDSDIRVPPDYL 49 (175)
T ss_pred ChHHHHHHHHHHhhCCCCEEEEECCCeeECHHHH
Confidence 4567777888898 99999999999998876554
No 262
>PF02348 CTP_transf_3: Cytidylyltransferase; InterPro: IPR003329 Synonym(s): CMP-N-acetylneuraminic acid synthetase Acylneuraminate cytidylyltransferase (2.7.7.43 from EC) (CMP-NeuAc synthetase) catalyzes the reaction of CTP and NeuAc to form CMP-NeuAc, which is the nucleotide sugar donor used by sialyltransferases []. The outer membrane lipooligosaccharides of some microorganisms contain terminal sialic acid attached to N-acetyllactosamine and so this modification may be important in pathogenesis.; GO: 0009103 lipopolysaccharide biosynthetic process; PDB: 3K8D_C 1VH1_B 3K8E_C 1QWJ_A 3EWI_A 1VIC_B 3DUV_A 1VH3_C 3TQD_A 2Y6P_C ....
Probab=55.87 E-value=97 Score=29.51 Aligned_cols=91 Identities=11% Similarity=0.104 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhccCC---EEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGE---ILV 288 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~gd---~i~ 288 (605)
+.+..+++.+++.... .+|+|.-| ++. +.+++.+++..+...+ +.-.........++.++..+ +++
T Consensus 25 pLi~~~i~~a~~s~~~---d~IvVaTd---~~~----i~~~~~~~g~~v~~~~-~~~~~~~~r~~~~~~~~~~~~~~~vv 93 (217)
T PF02348_consen 25 PLIEYVIERAKQSKLI---DEIVVATD---DEE----IDDIAEEYGAKVIFRR-GSLADDTDRFIEAIKHFLADDEDIVV 93 (217)
T ss_dssp EHHHHHHHHHHHTTTT---SEEEEEES---SHH----HHHHHHHTTSEEEE---TTSSSHHHHHHHHHHHHTCSTTSEEE
T ss_pred cHHHHHHHHHHhCCCC---CeEEEeCC---CHH----HHHHHHHcCCeeEEcC-hhhcCCcccHHHHHHHhhhhHHhhcc
Confidence 5677778777754443 37666422 222 3445566653453333 33233444445666677666 999
Q ss_pred EecCCccc-CcChHHHHHHHHHcCCc
Q psy10463 289 FLDAHCEC-TLGWLENLVARVAEDRT 313 (605)
Q Consensus 289 flD~D~~~-~~~~L~~ll~~~~~~~~ 313 (605)
.+.+|+.+ .|..+..+++.+.+...
T Consensus 94 ~~~~d~Pll~~~~i~~~i~~~~~~~~ 119 (217)
T PF02348_consen 94 RLQGDSPLLDPTSIDRAIEDIREANE 119 (217)
T ss_dssp EESTTETT--HHHHHHHHHHHHHSTT
T ss_pred ccCCeeeECCHHHHHHHHHHHhcCch
Confidence 99999975 89999999999988754
No 263
>TIGR01208 rmlA_long glucose-1-phosphate thymidylylransferase, long form. Alternate name: dTDP-D-glucose synthase
Probab=55.86 E-value=2.6e+02 Score=29.08 Aligned_cols=92 Identities=15% Similarity=0.116 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHH---HCCCCEEEEeCCCCCChHHHHHHHHhhccCCEEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVA---KLSVPTRVIRSPGRVGLIKARLLGARQAEGEILV 288 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~---~~~~~v~~i~~~~n~G~~~arN~G~~~A~gd~i~ 288 (605)
+.+...|.++.+.. . .+|+++-..-..+. ++++.. .++..+.++..+...|.+.+.-.+...-..+-++
T Consensus 31 pli~~~l~~l~~~g-i---~~i~vv~~~~~~~~----i~~~~~~~~~~~~~~~~~~~~~~~G~~~al~~a~~~l~~~~~l 102 (353)
T TIGR01208 31 PILQYAIEDLAEAG-I---TDIGIVVGPVTGEE----IKEIVGEGERFGAKITYIVQGEPLGLAHAVYTARDFLGDDDFV 102 (353)
T ss_pred eHHHHHHHHHHHCC-C---CEEEEEeCCCCHHH----HHHHHhcccccCceEEEEECCCCCCHHHHHHHHHHhcCCCCEE
Confidence 46777777776542 1 36766644312222 233332 2233566776666788888888877765443355
Q ss_pred EecCCcccCcChHHHHHHHHHcCC
Q psy10463 289 FLDAHCECTLGWLENLVARVAEDR 312 (605)
Q Consensus 289 flD~D~~~~~~~L~~ll~~~~~~~ 312 (605)
++.+|..++ .-+.++++...+..
T Consensus 103 i~~gD~~~~-~~l~~l~~~~~~~~ 125 (353)
T TIGR01208 103 VYLGDNLIQ-DGISRFVKSFEEKD 125 (353)
T ss_pred EEECCeecC-ccHHHHHHHHHhcC
Confidence 667888775 45677787765443
No 264
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.
Probab=55.56 E-value=54 Score=31.77 Aligned_cols=69 Identities=23% Similarity=0.243 Sum_probs=42.7
Q ss_pred cEEEEEEeecCchHHHHHHHHHH---HhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCc--chHH
Q psy10463 91 KSSIVIVFHNEAWSALLRTVHSV---ISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRV--GLIK 165 (605)
Q Consensus 91 ~~Siiip~yN~~~~~l~~~l~sv---~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~--G~~~ 165 (605)
++.||||..|.. +.|...|..+ |++.. +.+-| -++.+..+. ..+.
T Consensus 3 ~~aiivpyr~R~-~~l~~~l~~~~~~L~rq~--~~~~i---------------------------~vi~Q~~~~~FNR~~ 52 (219)
T cd00899 3 KVAIIVPFRNRF-EHLLIFLPHLHPFLQRQQ--LDYRI---------------------------FVIEQVGNFRFNRAK 52 (219)
T ss_pred ceEEEEecCCHH-HHHHHHHHHHHHHHHhcC--CcEEE---------------------------EEEEecCCccchhhh
Confidence 589999999988 7776665543 33321 11333 344433332 3355
Q ss_pred HHHHHhhhcc----CceEEEecCccccc
Q psy10463 166 ARLLGARQAE----GEILVFLDAHCECT 189 (605)
Q Consensus 166 a~n~g~~~a~----g~~i~~lD~d~~~~ 189 (605)
..|.|...|. .++++|-|-|..+.
T Consensus 53 llNvG~~~a~k~~~~dc~i~hDVDllP~ 80 (219)
T cd00899 53 LLNVGFLEALKDGDWDCFIFHDVDLLPE 80 (219)
T ss_pred hhhHHHHHHhhcCCccEEEEeccccccc
Confidence 6688777773 56888888887554
No 265
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=55.02 E-value=40 Score=32.68 Aligned_cols=94 Identities=18% Similarity=0.181 Sum_probs=50.9
Q ss_pred hHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCC------------C----ChHHH
Q psy10463 211 WSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGR------------V----GLIKA 274 (605)
Q Consensus 211 ~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n------------~----G~~~a 274 (605)
...+.-++.|++..++......|.+++++.+.+..+ .+++...... .+..+..... . ...-+
T Consensus 11 ~~~~~v~i~Sl~~~~~~~~~~~i~i~~~~~~~~~~~-~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (250)
T PF01501_consen 11 LEGAAVLIKSLLKNNPDPSNLHIYIITDDISEEDFE-KLRALAAEVI-EIEPIEFPDISMLEEFQFNSPSKRHFSPATFA 88 (250)
T ss_dssp HHHHHHHHHHHHHTTTT-SSEEEEEEESSS-HHHHH-HHHHHSCCCC-TTECEEETSGGHHH--TTS-HCCTCGGGGGGG
T ss_pred HHHHHHHHHHHHHhccccccceEEEecCCCCHHHHH-HHhhhccccc-ceeeeccchHHhhhhhhhcccccccccHHHHH
Confidence 367888999999988743336788888876655333 3444333332 2222211110 0 11222
Q ss_pred HHHHHhh-ccCCEEEEecCCcccCcChHHHHHHH
Q psy10463 275 RLLGARQ-AEGEILVFLDAHCECTLGWLENLVAR 307 (605)
Q Consensus 275 rN~G~~~-A~gd~i~flD~D~~~~~~~L~~ll~~ 307 (605)
|-...+. ...+-+++||+|+.+.. -|..+.+.
T Consensus 89 rl~i~~ll~~~drilyLD~D~lv~~-dl~~lf~~ 121 (250)
T PF01501_consen 89 RLFIPDLLPDYDRILYLDADTLVLG-DLDELFDL 121 (250)
T ss_dssp GGGHHHHSTTSSEEEEE-TTEEESS--SHHHHC-
T ss_pred HhhhHHHHhhcCeEEEEcCCeeeec-Chhhhhcc
Confidence 3334444 57799999999999844 34556553
No 266
>TIGR01105 galF UTP-glucose-1-phosphate uridylyltransferase, non-catalytic GalF subunit. GalF is a non-catalytic subunit of the UTP-glucose pyrophosphorylase modulating the enzyme activity to increase the formation of UDP-glucose
Probab=54.74 E-value=1.6e+02 Score=30.07 Aligned_cols=102 Identities=20% Similarity=0.234 Sum_probs=59.8
Q ss_pred EEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHH-------------------HHH--HCCCCEE
Q psy10463 203 VIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDE-------------------YVA--KLSVPTR 261 (605)
Q Consensus 203 IIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~-------------------~~~--~~~~~v~ 261 (605)
.+|.-+.+ .|...|..+.+... .||+||-....+ .+.+.+.. +.. .+..++.
T Consensus 28 LvpV~gkP--iI~~vl~~l~~~Gi----~~ivivv~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 100 (297)
T TIGR01105 28 MLPIVDKP--MIQYIVDEIVAAGI----KEIVLVTHASKN-AVENHFDTSYELESLLEQRVKRQLLAEVQSICPPGVTIM 100 (297)
T ss_pred eeEECCEE--HHHHHHHHHHHCCC----CEEEEEecCChH-HHHHHHhchHHHHHHHHHhcchhhhhhhhhcCCCCceEE
Confidence 34555543 66667777665432 477777554322 22222211 000 1123578
Q ss_pred EEeCCCCCChHHHHHHHHhhcc-CCEEEEecCCcccCcC-------hHHHHHHHHHcCC
Q psy10463 262 VIRSPGRVGLIKARLLGARQAE-GEILVFLDAHCECTLG-------WLENLVARVAEDR 312 (605)
Q Consensus 262 ~i~~~~n~G~~~arN~G~~~A~-gd~i~flD~D~~~~~~-------~L~~ll~~~~~~~ 312 (605)
++..++..|.+.|.-.+...-. .++++++ .|..+++. -+.+|++...+..
T Consensus 101 ~~~q~~~lGtg~Av~~a~~~l~~~~flvv~-gD~l~~~~~~~~~~~~l~~li~~~~~~~ 158 (297)
T TIGR01105 101 NVRQAQPLGLGHSILCARPVVGDNPFVVVL-PDIIIDDATADPLRYNLAAMIARFNETG 158 (297)
T ss_pred EeeCCCcCchHHHHHHHHHHhCCCCEEEEE-CCeeccccccccchhHHHHHHHHHHHhC
Confidence 8888889999999888877654 3565554 88776542 6778888765433
No 267
>COG0746 MobA Molybdopterin-guanine dinucleotide biosynthesis protein A [Coenzyme metabolism]
Probab=54.68 E-value=73 Score=30.22 Aligned_cols=57 Identities=14% Similarity=0.124 Sum_probs=48.1
Q ss_pred CEEEEeCCCCC-ChHHHHHHHHhhccCCEEEEecCCcc-cCcChHHHHHHHHHcCCcEE
Q psy10463 259 PTRVIRSPGRV-GLIKARLLGARQAEGEILVFLDAHCE-CTLGWLENLVARVAEDRTRV 315 (605)
Q Consensus 259 ~v~~i~~~~n~-G~~~arN~G~~~A~gd~i~flD~D~~-~~~~~L~~ll~~~~~~~~~v 315 (605)
.+.++...... |.-.+.-.|++++.+++++|+=.|+- ++++.++.|.+...+.+..+
T Consensus 61 g~~vv~D~~~~~GPL~Gi~~al~~~~~~~~~v~~~D~P~i~~~lv~~l~~~~~~~~~~~ 119 (192)
T COG0746 61 GLPVVPDELPGFGPLAGILAALRHFGTEWVLVLPCDMPFIPPELVERLLSAFKQTGAAI 119 (192)
T ss_pred CCceeecCCCCCCCHHHHHHHHHhCCCCeEEEEecCCCCCCHHHHHHHHHhhcccCCcE
Confidence 46777766666 99999999999999999999999997 58899999999998776333
No 268
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=53.74 E-value=2.4e+02 Score=28.90 Aligned_cols=104 Identities=14% Similarity=0.161 Sum_probs=58.1
Q ss_pred eEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCC----CEEEEeCCCCC--Ch---
Q psy10463 201 SIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSV----PTRVIRSPGRV--GL--- 271 (605)
Q Consensus 201 SVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~----~v~~i~~~~n~--G~--- 271 (605)
+||..-.+ . +.+...|.|++..+... ..+.|+.|....+...+.++++...... .+..|.-+... +.
T Consensus 4 ~vv~~g~~-~-~~~~~~lkSil~~n~~~--l~Fhi~~d~~~~~~~~~~l~~~~~~~~~~i~~~i~~I~~P~~~~~~ws~l 79 (304)
T cd06430 4 AVVACGER-L-EETLTMLKSAIVFSQKP--LRFHIFAEDQLKQSFKEKLDDWPELIDRKFNYTLHPITFPSGNAAEWKKL 79 (304)
T ss_pred EEEEcCCc-H-HHHHHHHHHHHHhCCCC--EEEEEEECCccCHHHHHHHHHHHHhccceeeeEEEEEecCccchhhhhhc
Confidence 34444444 3 78889999997766433 5666665553333455567777554322 33334433321 11
Q ss_pred ----HHHHHHHHhhc-cCCEEEEecCCcccCcChHHHHHHHHH
Q psy10463 272 ----IKARLLGARQA-EGEILVFLDAHCECTLGWLENLVARVA 309 (605)
Q Consensus 272 ----~~arN~G~~~A-~gd~i~flD~D~~~~~~~L~~ll~~~~ 309 (605)
+..|-...+.- .-|-++.||+|+.+.. -|++|.+.+.
T Consensus 80 ~~~~~y~RL~ip~lLp~~dkvLYLD~Dii~~~-dI~eL~~~~~ 121 (304)
T cd06430 80 FKPCAAQRLFLPSLLPDVDSLLYVDTDILFLR-PVEEIWSFLK 121 (304)
T ss_pred ccHHHHHHHHHHHHhhhhceEEEeccceeecC-CHHHHHHHHh
Confidence 22233332222 4578999999998844 3577777543
No 269
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=53.34 E-value=20 Score=39.53 Aligned_cols=40 Identities=18% Similarity=0.129 Sum_probs=33.3
Q ss_pred ceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCC
Q psy10463 200 SSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDA 239 (605)
Q Consensus 200 vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~ 239 (605)
+-..||+|||..+.|.++|.|+..+++++...=|+||-||
T Consensus 27 ~i~~v~cy~E~~~~l~~tldsl~~~~y~~~~k~~~vi~DG 66 (527)
T PF03142_consen 27 VICLVPCYSEGEEELRTTLDSLATTDYDDSRKLIFVICDG 66 (527)
T ss_pred EEEEEccccCChHHHHHHHHHHHhcCCCCcccEEEEEcCc
Confidence 4457899999988999999999999988776677777776
No 270
>PLN02757 sirohydrochlorine ferrochelatase
Probab=52.50 E-value=1.7e+02 Score=26.59 Aligned_cols=51 Identities=4% Similarity=0.104 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEe----eCCCC-hHHHHHHHHHHHHHCCCCEEEEeCCC
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLV----DDAST-REFLKSSLDEYVAKLSVPTRVIRSPG 267 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvV----Dd~S~-d~~~~~~l~~~~~~~~~~v~~i~~~~ 267 (605)
+.+.+.|..+.++.. ..|+|| -.|.. ...+.+.++++..++| .++++..+.
T Consensus 58 Psl~eal~~l~~~g~----~~vvVvP~FL~~G~H~~~DIp~~v~~~~~~~p-~~~i~~~~p 113 (154)
T PLN02757 58 PSIKDAFGRCVEQGA----SRVIVSPFFLSPGRHWQEDIPALTAEAAKEHP-GVKYLVTAP 113 (154)
T ss_pred CCHHHHHHHHHHCCC----CEEEEEEhhhcCCcchHhHHHHHHHHHHHHCC-CcEEEECCC
Confidence 567888888877654 255554 34443 2346667777777887 677665443
No 271
>cd04198 eIF-2B_gamma_N The N-terminal domain of gamma subunit of the eIF-2B is a subfamily of glycosyltransferase 2. N-terminal domain of gamma subunit of the eukaryotic translation initiation factor 2B (eIF-2B): eIF-2B is a guanine nucleotide-exchange factor which mediates the exchange of GDP (bound to initiation factor eIF2) for GTP, generating active eIF2.GTP complex. EIF2B is a complex multimeric protein consisting of five subunits named alpha, beta, gamma, delta and epsilon. Subunit gamma shares sequence similarity with epsilon subunit, and with a family of bifunctional nucleotide-binding enzymes such as ADP-glucose pyrophosphorylase, suggesting that epsilon subunit may play roles in nucleotide binding activity. In yeast, eIF2B gamma enhances the activity of eIF2B-epsilon leading to the idea that these subunits form the catalytic subcomplex.
Probab=52.36 E-value=1.6e+02 Score=28.20 Aligned_cols=100 Identities=9% Similarity=0.102 Sum_probs=57.7
Q ss_pred EEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHC------CCCEEEEeCCCCCChHHHHHH
Q psy10463 204 IVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKL------SVPTRVIRSPGRVGLIKARLL 277 (605)
Q Consensus 204 Ip~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~------~~~v~~i~~~~n~G~~~arN~ 277 (605)
+|.-|. +.+..+++.+.+. . ..+|+||-.... .+.++++.+.. ...+.++......|.+.+.-.
T Consensus 26 lpv~g~--pli~~~l~~l~~~-g---~~~iivv~~~~~----~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~gt~~al~~ 95 (214)
T cd04198 26 LPVANK--PMIWYPLDWLEKA-G---FEDVIVVVPEEE----QAEISTYLRSFPLNLKQKLDEVTIVLDEDMGTADSLRH 95 (214)
T ss_pred CEECCe--eHHHHHHHHHHHC-C---CCeEEEEECHHH----HHHHHHHHHhcccccCcceeEEEecCCCCcChHHHHHH
Confidence 344444 4677777777763 2 147777754211 11234444432 112344445667888888877
Q ss_pred HHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEE
Q psy10463 278 GARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRV 315 (605)
Q Consensus 278 G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~v 315 (605)
+......+ ++++.+|... +.-+..+++........+
T Consensus 96 ~~~~i~~d-~lv~~~D~i~-~~~l~~~l~~h~~~~~~~ 131 (214)
T cd04198 96 IRKKIKKD-FLVLSCDLIT-DLPLIELVDLHRSHDASL 131 (214)
T ss_pred HHhhcCCC-EEEEeCcccc-ccCHHHHHHHHhccCCcE
Confidence 77766555 6677888654 445677887776654433
No 272
>KOG1413|consensus
Probab=52.26 E-value=59 Score=33.59 Aligned_cols=49 Identities=20% Similarity=0.325 Sum_probs=42.8
Q ss_pred CCCCcEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhh
Q psy10463 87 EFLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREF 136 (605)
Q Consensus 87 ~~~p~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~ 136 (605)
...|.+-||+-+.|.+ +.|+++++.++..-+....+-|||--||+..++
T Consensus 64 ~~~~v~pvvVf~csR~-~~lr~~v~kll~yrPsaekfpiiVSQD~~~e~v 112 (411)
T KOG1413|consen 64 NWPPVIPVVVFACSRA-DALRRHVKKLLEYRPSAEKFPIIVSQDCEKEAV 112 (411)
T ss_pred CCCCceeEEEEecCcH-HHHHHHHHHHHHhCcchhhcCEEEeccCCcHHH
Confidence 4567888999999999 999999999999988777788999999998875
No 273
>PRK14357 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=51.51 E-value=2.1e+02 Score=30.79 Aligned_cols=97 Identities=10% Similarity=0.111 Sum_probs=61.6
Q ss_pred EEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhc
Q psy10463 203 VIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQA 282 (605)
Q Consensus 203 IIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A 282 (605)
.+|.-+. +.+..+|+++.+. . .+|+|+-+.. .+ .+.++.. ..+.++..+...|.+.+...++...
T Consensus 22 l~~v~gk--pli~~~l~~l~~~-~----~~i~vv~~~~-~~----~i~~~~~---~~~~~~~~~~~~g~~~ai~~a~~~l 86 (448)
T PRK14357 22 LHKISGK--PMINWVIDTAKKV-A----QKVGVVLGHE-AE----LVKKLLP---EWVKIFLQEEQLGTAHAVMCARDFI 86 (448)
T ss_pred eeEECCe--eHHHHHHHHHHhc-C----CcEEEEeCCC-HH----HHHHhcc---cccEEEecCCCCChHHHHHHHHHhc
Confidence 3444444 5777788877763 2 2666664321 12 2333322 2466666666778888877777665
Q ss_pred c-CCEEEEecCCc-ccCcChHHHHHHHHHcCCcE
Q psy10463 283 E-GEILVFLDAHC-ECTLGWLENLVARVAEDRTR 314 (605)
Q Consensus 283 ~-gd~i~flD~D~-~~~~~~L~~ll~~~~~~~~~ 314 (605)
. .+.++++++|. .+....++.+++.+.+....
T Consensus 87 ~~~~~vlv~~gD~p~i~~~~i~~l~~~~~~~~~d 120 (448)
T PRK14357 87 EPGDDLLILYGDVPLISENTLKRLIEEHNRKGAD 120 (448)
T ss_pred CcCCeEEEEeCCcccCCHHHHHHHHHHHHhcCCe
Confidence 3 58899999998 46778889999887664443
No 274
>KOG1476|consensus
Probab=50.91 E-value=1.2e+02 Score=31.03 Aligned_cols=79 Identities=16% Similarity=0.210 Sum_probs=49.2
Q ss_pred CCcEEEEEEeecCch--HHHHHHHHHHHhcCCccCcceEEEEeCCC-chhhHHHHHHHHHHhcCCCeEEeecCCCcch--
Q psy10463 89 LPKSSIVIVFHNEAW--SALLRTVHSVISRSPRSMLKEILLVDDAS-TREFLKSSLDEYVAKLSVPTRVIRSPGRVGL-- 163 (605)
Q Consensus 89 ~p~~Siiip~yN~~~--~~l~~~l~sv~~~~~~~~~~EiivvdD~S-~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~-- 163 (605)
.|.|-||.|+|+... ..|.+. ..-|.+-+ + .-+|||+||+ .-.. ....+++.+-.-+.+..+...|.
T Consensus 86 ~~~iivVTPTY~R~~q~~~LtRl-anTL~~V~-n--LhWIVVEd~~~~~p~----v~~~L~rtgl~ythl~~~t~~~~~~ 157 (330)
T KOG1476|consen 86 LPTIIVVTPTYVRPVQAAELTRL-ANTLRLVP-N--LHWIVVEDGEGTTPE----VSGILRRTGLPYTHLVHKTPMGYKA 157 (330)
T ss_pred CccEEEEcccccchhHHHHHHHH-HHHHhhcC-C--eeEEEEecCCCCCHH----HHHHHHHcCCceEEEeccCCCCCcc
Confidence 788999999998763 222222 22333444 4 4889999995 3333 44555555555566666655554
Q ss_pred ---HHHHHHHhhhcc
Q psy10463 164 ---IKARLLGARQAE 175 (605)
Q Consensus 164 ---~~a~n~g~~~a~ 175 (605)
...||.|++.-+
T Consensus 158 ~rg~~qRn~aL~~ir 172 (330)
T KOG1476|consen 158 RRGWEQRNMALRWIR 172 (330)
T ss_pred ccchhHHHHHHHHHH
Confidence 357888887755
No 275
>TIGR01099 galU UTP-glucose-1-phosphate uridylyltransferase. Built to distinquish between the highly similar genes galU and galF
Probab=50.86 E-value=2.1e+02 Score=28.13 Aligned_cols=56 Identities=13% Similarity=0.020 Sum_probs=37.8
Q ss_pred CEEEEeCCCCCChHHHHHHHHhhccCCEEEEecCCcccCcC--hHHHHHHHHHcCCcE
Q psy10463 259 PTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLG--WLENLVARVAEDRTR 314 (605)
Q Consensus 259 ~v~~i~~~~n~G~~~arN~G~~~A~gd~i~flD~D~~~~~~--~L~~ll~~~~~~~~~ 314 (605)
.+.+.......|.+.|.-.+......+-++++.+|..+... -+..+++...+....
T Consensus 94 ~i~~~~~~~~~G~~~al~~~~~~~~~~~~lv~~gD~~~~~~~~~~~~l~~~~~~~~~~ 151 (260)
T TIGR01099 94 TIFYVRQKEQKGLGHAVLCAEPFVGDEPFAVILGDDIVVSEEPALKQMIDLYEKYGCS 151 (260)
T ss_pred eEEEEecCCCCCHHHHHHHHHHhhCCCCEEEEeccceecCCcHHHHHHHHHHHHhCCC
Confidence 35556666678988888777766544556666777766543 688898887655443
No 276
>cd02524 G1P_cytidylyltransferase G1P_cytidylyltransferase catalyzes the production of CDP-D-Glucose. Alpha-D-Glucose-1-phosphate Cytidylyltransferase catalyzes the production of CDP-D-Glucose from alpha-D-Glucose-1-phosphate and MgCTP as substrate. CDP-D-Glucose is the precursor for synthesizing four of the five naturally occurring 3,6-dideoxy sugars-abequose (3,6-dideoxy-D-Xylo-hexose), ascarylose (3,6-dideoxy-L-arabino-hexose), paratose (3,6-dideoxy-D-ribohexose), and tyvelose (3,6-dideoxy-D-arabino-hexose. Deoxysugars are ubiquitous in nature where they function in a variety of biological processes, including cell adhesion, immune response, determination of ABO blood groups, fertilization, antibiotic function, and microbial pathogenicity.
Probab=48.36 E-value=2.3e+02 Score=27.73 Aligned_cols=45 Identities=7% Similarity=-0.119 Sum_probs=32.4
Q ss_pred CCChHHHHHHHHhhccC-CEEEEecCCcccCcChHHHHHHHHHcCCc
Q psy10463 268 RVGLIKARLLGARQAEG-EILVFLDAHCECTLGWLENLVARVAEDRT 313 (605)
Q Consensus 268 n~G~~~arN~G~~~A~g-d~i~flD~D~~~~~~~L~~ll~~~~~~~~ 313 (605)
..|.+.|.-.+.....+ +.++++++|.....+. ..+++.......
T Consensus 101 ~~~t~~al~~a~~~~~~~~~~lv~~gD~i~~~dl-~~ll~~h~~~~~ 146 (253)
T cd02524 101 NTMTGGRLKRVRRYLGDDETFMLTYGDGVSDVNI-NALIEFHRSHGK 146 (253)
T ss_pred ccccHHHHHHHHHhcCCCCeEEEEcCCEEECCCH-HHHHHHHHHcCC
Confidence 34567776667666654 7889999999888777 888876655433
No 277
>COG1210 GalU UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]
Probab=48.25 E-value=48 Score=33.14 Aligned_cols=60 Identities=20% Similarity=0.174 Sum_probs=47.2
Q ss_pred CCEEEEeCCCCCChHHHHHHHHhhccCC-EEEEecCCccc-CcChHHHHHHHHHcCCcEEEe
Q psy10463 258 VPTRVIRSPGRVGLIKARLLGARQAEGE-ILVFLDAHCEC-TLGWLENLVARVAEDRTRVVC 317 (605)
Q Consensus 258 ~~v~~i~~~~n~G~~~arN~G~~~A~gd-~i~flD~D~~~-~~~~L~~ll~~~~~~~~~vv~ 317 (605)
.++.++|+++..|++.|...|=.....+ |.+.|-+|... .+..|.+|++..++....+++
T Consensus 97 ~~i~~vRQ~e~~GLGhAVl~A~~~vg~EpFaVlL~Ddl~~~~~~~l~qmi~~ye~~g~svi~ 158 (291)
T COG1210 97 VTISFVRQKEPLGLGHAVLCAKPFVGDEPFAVLLPDDLVDSEKPCLKQMIELYEETGGSVIG 158 (291)
T ss_pred ceEEEEecCCCCcchhHHHhhhhhcCCCceEEEeCCeeecCCchHHHHHHHHHHHhCCcEEE
Confidence 3789999999999999998888887776 66666666655 378999999998886654444
No 278
>PF09837 DUF2064: Uncharacterized protein conserved in bacteria (DUF2064); InterPro: IPR018641 This entry contains proteins that have no known function. ; PDB: 3CGX_A.
Probab=47.07 E-value=1.3e+02 Score=26.22 Aligned_cols=82 Identities=16% Similarity=0.095 Sum_probs=47.6
Q ss_pred eeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhc--cCCEEEEecCCcc-cCcChHHHHHHH
Q psy10463 231 KEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQA--EGEILVFLDAHCE-CTLGWLENLVAR 307 (605)
Q Consensus 231 ~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A--~gd~i~flD~D~~-~~~~~L~~ll~~ 307 (605)
.+++|.=++..+.... +.. ... ..+.++.+.. .+++.-++.+++.+ ..+-++++-+|+. +++..|+...+.
T Consensus 11 ~~~~l~~~~~~~~~~~---~~~-~~~-~~~~~~~Q~g-~dLG~Rm~~a~~~~~~g~~~vvliGsD~P~l~~~~l~~A~~~ 84 (122)
T PF09837_consen 11 ADVVLAYTPDGDHAAF---RQL-WLP-SGFSFFPQQG-GDLGERMANAFQQAARGYEPVVLIGSDCPDLTPDDLEQAFEA 84 (122)
T ss_dssp SEEEEEE----TTHHH---HHH-HH--TTSEEEE--S-SSHHHHHHHHHHHHHTT-SEEEEE-SS-TT--HHHHHHHHHH
T ss_pred cCEEEEEcCCccHHHH---hcc-ccC-CCCEEeecCC-CCHHHHHHHHHHHHHcCCCcEEEEcCCCCCCCHHHHHHHHHH
Confidence 4666665555443211 111 122 2677777654 67887777787777 5678999999997 689999999998
Q ss_pred HHcCCcEEEeee
Q psy10463 308 VAEDRTRVVCPV 319 (605)
Q Consensus 308 ~~~~~~~vv~p~ 319 (605)
+... ..|.+|.
T Consensus 85 L~~~-d~VlgPa 95 (122)
T PF09837_consen 85 LQRH-DVVLGPA 95 (122)
T ss_dssp TTT--SEEEEEB
T ss_pred hccC-CEEEeec
Confidence 8776 5677775
No 279
>cd02541 UGPase_prokaryotic Prokaryotic UGPase catalyses the synthesis of UDP-glucose. Prokaryotic UDP-Glucose Pyrophosphorylase (UGPase) catalyzes a reversible production of UDP-Glucose and pyrophosphate (PPi) from glucose-1-phosphate and UTP. UDP-glucose plays pivotal roles in galactose utilization, in glycogen synthesis, and in the synthesis of the carbohydrate moieties of glycolipids , glycoproteins , and proteoglycans. UGPase is found in both prokaryotes and eukaryotes, although prokaryotic and eukaryotic forms of UGPase catalyze the same reaction, they share low sequence similarity.
Probab=44.31 E-value=3.2e+02 Score=26.89 Aligned_cols=55 Identities=16% Similarity=0.094 Sum_probs=39.6
Q ss_pred CEEEEeCCCCCChHHHHHHHHhhccCCEEEEecCCcccCcC--hHHHHHHHHHcCCc
Q psy10463 259 PTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLG--WLENLVARVAEDRT 313 (605)
Q Consensus 259 ~v~~i~~~~n~G~~~arN~G~~~A~gd~i~flD~D~~~~~~--~L~~ll~~~~~~~~ 313 (605)
.+.++..+...|.+.|...++.....+-++++.+|..+... -+..+++...+...
T Consensus 94 ~i~~~~~~~~~Gt~~al~~~~~~i~~~~~lv~~gD~~~~~~~~~~~~l~~~~~~~~~ 150 (267)
T cd02541 94 NIHYVRQKEPLGLGHAVLCAKPFIGDEPFAVLLGDDLIDSKEPCLKQLIEAYEKTGA 150 (267)
T ss_pred eEEEEEcCCCCChHHHHHHHHHHhCCCceEEEECCeEEeCCchHHHHHHHHHHHhCC
Confidence 46677777778999998888877665656777788776543 58899887765433
No 280
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=44.07 E-value=1.4e+02 Score=29.86 Aligned_cols=96 Identities=20% Similarity=0.147 Sum_probs=48.4
Q ss_pred eEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEe--eCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCCh--H----
Q psy10463 201 SIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLV--DDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGL--I---- 272 (605)
Q Consensus 201 SVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvV--Dd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~--~---- 272 (605)
-|||+..+.........|..+.. ....+..||+.- +|-+.. ..+.+.....-.-..++-+..++-.+. .
T Consensus 3 GIVi~~g~~~~~~a~~lI~~LR~-~g~~LPIEI~~~~~~dl~~~--~~~~l~~~q~v~~vd~~~~~~~~~~~~~~~~~~~ 79 (271)
T PF11051_consen 3 GIVITAGDKYLWLALRLIRVLRR-LGNTLPIEIIYPGDDDLSKE--FCEKLLPDQDVWFVDASCVIDPDYLGKSFSKKGF 79 (271)
T ss_pred EEEEEecCccHHHHHHHHHHHHH-hCCCCCEEEEeCCccccCHH--HHHHHhhhhhhheecceEEeeccccccccccCCc
Confidence 37888887653334455555544 444556899987 444322 222222200000012332222222222 1
Q ss_pred HHHHHHHhhccCCEEEEecCCcccCcC
Q psy10463 273 KARLLGARQAEGEILVFLDAHCECTLG 299 (605)
Q Consensus 273 ~arN~G~~~A~gd~i~flD~D~~~~~~ 299 (605)
...-.|+-.++-+=++|||+|..+-.+
T Consensus 80 ~~K~lA~l~ssFeevllLDaD~vpl~~ 106 (271)
T PF11051_consen 80 QNKWLALLFSSFEEVLLLDADNVPLVD 106 (271)
T ss_pred hhhhhhhhhCCcceEEEEcCCcccccC
Confidence 122245566778889999999987443
No 281
>cd04183 GT2_BcE_like GT2_BcbE_like is likely involved in the biosynthesis of the polysaccharide capsule. GT2_BcbE_like: The bcbE gene is one of the genes in the capsule biosynthetic locus of Pasteurella multocida. Its deducted product is likely involved in the biosynthesis of the polysaccharide capsule, which is found on surface of a wide range of bacteria. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=43.96 E-value=3e+02 Score=26.35 Aligned_cols=95 Identities=17% Similarity=0.165 Sum_probs=53.0
Q ss_pred EEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEE-eCCCCCChHHHHHHHHhhc
Q psy10463 204 IVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVI-RSPGRVGLIKARLLGARQA 282 (605)
Q Consensus 204 Ip~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i-~~~~n~G~~~arN~G~~~A 282 (605)
+|..++ +.+..+|+++.+.. . .++++|-. ... .....+.+.......++.++ ......|.+.+.-.|....
T Consensus 24 l~i~g~--pli~~~l~~l~~~g--~--~~ivvv~~-~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~g~~~~l~~a~~~l 95 (231)
T cd04183 24 IEVDGK--PMIEWVIESLAKIF--D--SRFIFICR-DEH-NTKFHLDESLKLLAPNATVVELDGETLGAACTVLLAADLI 95 (231)
T ss_pred eEECCE--EHHHHHHHhhhccC--C--ceEEEEEC-hHH-hhhhhHHHHHHHhCCCCEEEEeCCCCCcHHHHHHHHHhhc
Confidence 344454 47777777776543 1 36666643 211 11112222222211244443 3345678888888887765
Q ss_pred c-CCEEEEecCCcccCcChHHHHHH
Q psy10463 283 E-GEILVFLDAHCECTLGWLENLVA 306 (605)
Q Consensus 283 ~-gd~i~flD~D~~~~~~~L~~ll~ 306 (605)
. .+.++++++|..+..+....+..
T Consensus 96 ~~~~~~lv~~~D~i~~~~~~~~~~~ 120 (231)
T cd04183 96 DNDDPLLIFNCDQIVESDLLAFLAA 120 (231)
T ss_pred CCCCCEEEEecceeeccCHHHHHHH
Confidence 3 36677899999888876544433
No 282
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=43.79 E-value=3.3e+02 Score=26.86 Aligned_cols=92 Identities=14% Similarity=0.099 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCC-----C--CC----hHHHHHHHHh
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG-----R--VG----LIKARLLGAR 280 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~-----n--~G----~~~arN~G~~ 280 (605)
..+..++.|++..+... +.+.|++|+-+++. .+.++++..+++..+.++.-.. . .. .+.+|-..-.
T Consensus 14 ~~~~v~l~Sll~nn~~~--~~fyil~~~is~e~-~~~l~~~~~~~~~~i~~i~i~~~~~~~~~~~~~~~~~~y~rL~~~~ 90 (248)
T cd06432 14 RFLRIMMLSVMKNTKSP--VKFWFIKNFLSPQF-KEFLPEMAKEYGFEYELVTYKWPRWLHKQTEKQRIIWGYKILFLDV 90 (248)
T ss_pred HHHHHHHHHHHHcCCCC--EEEEEEeCCCCHHH-HHHHHHHHHHhCCceEEEEecChhhhhcccccchhHHHHHHHHHHH
Confidence 67888999999876433 78888888877653 4467777777765666655431 0 01 1223321111
Q ss_pred h--ccCCEEEEecCCcccCcChHHHHHHH
Q psy10463 281 Q--AEGEILVFLDAHCECTLGWLENLVAR 307 (605)
Q Consensus 281 ~--A~gd~i~flD~D~~~~~~~L~~ll~~ 307 (605)
. ..-+=+++||+|+.+. +-|.+|...
T Consensus 91 lLP~~vdkvLYLD~Dilv~-~dL~eL~~~ 118 (248)
T cd06432 91 LFPLNVDKVIFVDADQIVR-TDLKELMDM 118 (248)
T ss_pred hhhhccCEEEEEcCCceec-ccHHHHHhc
Confidence 1 2458899999999886 556777654
No 283
>TIGR00454 conserved hypothetical protein TIGR00454. At this time this gene appears to be present only in Archea
Probab=43.50 E-value=2.8e+02 Score=25.90 Aligned_cols=90 Identities=9% Similarity=0.091 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhc-cCCEEEEe
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQA-EGEILVFL 290 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A-~gd~i~fl 290 (605)
+.+...+..+.... . .+|++|-+..++. + +.+.+... ..++ .....|.......|++.. ..+.++++
T Consensus 28 plI~~vi~~l~~~~-i---~~I~Vv~~~~~~~-~----~~~l~~~~--~~~~-~~~g~G~~~~l~~al~~~~~~~~~lv~ 95 (183)
T TIGR00454 28 CLIDHVLSPLLKSK-V---NNIIIATSPHTPK-T----EEYINSAY--KDYK-NASGKGYIEDLNECIGELYFSEPFLVV 95 (183)
T ss_pred EHHHHHHHHHHhCC-C---CEEEEEeCCCHHH-H----HHHHhhcC--cEEE-ecCCCCHHHHHHHHhhcccCCCCEEEE
Confidence 56777777776432 1 3666664332222 2 33333221 2233 345578888888888753 35678889
Q ss_pred cCCcc-cCcChHHHHHHHHHcCCc
Q psy10463 291 DAHCE-CTLGWLENLVARVAEDRT 313 (605)
Q Consensus 291 D~D~~-~~~~~L~~ll~~~~~~~~ 313 (605)
-+|.. +.+..+..+++.+...+.
T Consensus 96 ~~D~P~i~~~~i~~li~~~~~~~~ 119 (183)
T TIGR00454 96 SSDLINLRSKIIDSIVDYYYCIKA 119 (183)
T ss_pred eCCcCcCCHHHHHHHHHHHHhcCC
Confidence 99986 589999999998766443
No 284
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=43.17 E-value=1.7e+02 Score=29.57 Aligned_cols=94 Identities=16% Similarity=0.142 Sum_probs=57.6
Q ss_pred EEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecC---C------Ccc
Q psy10463 92 SSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSP---G------RVG 162 (605)
Q Consensus 92 ~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~---~------~~G 162 (605)
++||...+|.. ..+..+|.||+...... ..+-|++|+.+.+..+.+. +.....+..|..+... . +..
T Consensus 3 ~~iv~~~~~y~-~~~~~~i~Sil~n~~~~--~~fhii~d~~s~~~~~~l~-~~~~~~~~~i~f~~i~~~~~~~~~~~~~~ 78 (280)
T cd06431 3 VAIVCAGYNAS-RDVVTLVKSVLFYRRNP--LHFHLITDEIARRILATLF-QTWMVPAVEVSFYNAEELKSRVSWIPNKH 78 (280)
T ss_pred EEEEEccCCcH-HHHHHHHHHHHHcCCCC--EEEEEEECCcCHHHHHHHH-HhccccCcEEEEEEhHHhhhhhccCcccc
Confidence 67888887766 88999999999876433 6888898888777644433 2223333345554432 1 111
Q ss_pred hHH----HHHHHhhhc--cCceEEEecCccccc
Q psy10463 163 LIK----ARLLGARQA--EGEILVFLDAHCECT 189 (605)
Q Consensus 163 ~~~----a~n~g~~~a--~g~~i~~lD~d~~~~ 189 (605)
.+. +|-..-+.- .-+-+++||+|..+.
T Consensus 79 ~s~~y~y~RL~ip~llp~~~dkvLYLD~Diiv~ 111 (280)
T cd06431 79 YSGIYGLMKLVLTEALPSDLEKVIVLDTDITFA 111 (280)
T ss_pred hhhHHHHHHHHHHHhchhhcCEEEEEcCCEEEc
Confidence 222 233232222 367899999998664
No 285
>PLN03133 beta-1,3-galactosyltransferase; Provisional
Probab=42.53 E-value=3.8e+02 Score=30.54 Aligned_cols=161 Identities=9% Similarity=0.094 Sum_probs=77.5
Q ss_pred EEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCC---CCCh--HHHHHHHHhhccCCEEEEecCCcccCcChHHHHHHH
Q psy10463 233 ILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG---RVGL--IKARLLGARQAEGEILVFLDAHCECTLGWLENLVAR 307 (605)
Q Consensus 233 IIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~---n~G~--~~arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~ 307 (605)
++++---+.++.+...++.-.+.++ .|-...... |.-+ ..+.-.+....+.+||+..|+|+.+..+-|-..+..
T Consensus 421 ~rFvVG~s~n~~l~~~L~~Ea~~yg-DIIq~dF~DsY~NLTlKtl~~~~wa~~c~~akFilK~DDDvFVnv~~Ll~~L~~ 499 (636)
T PLN03133 421 VRFFVGLHKNQMVNEELWNEARTYG-DIQLMPFVDYYSLITWKTLAICIFGTEVVSAKYVMKTDDDAFVRVDEVLASLKR 499 (636)
T ss_pred EEEEEecCCcHHHHHHHHHHHHHcC-CeEEEeeechhhhhHHHHHHHHHHHHhCCCceEEEEcCCceEEcHHHHHHHHHh
Confidence 3333333444555556666667776 443322222 1111 112223334457899999999999987655555543
Q ss_pred HHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhH
Q psy10463 308 VAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFH 387 (605)
Q Consensus 308 ~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~ 387 (605)
.........|-+. ...... +. ..-+|+ ++..++. ....-|.+.|+.+++++++...
T Consensus 500 ~~~~~~Ly~G~v~----------~~~~Pi-Rd-----~~sKWY-Vs~~eyp-------~~~YPpYasG~gYVlS~Dla~~ 555 (636)
T PLN03133 500 TNVSHGLLYGLIN----------SDSQPH-RN-----PDSKWY-ISPEEWP-------EETYPPWAHGPGYVVSRDIAKE 555 (636)
T ss_pred cCCCCceEEEEec----------cCCCcc-cC-----CCCCCC-CCHHHCC-------CCCCCCCCCcCEEEEcHHHHHH
Confidence 2222222222111 000000 00 001121 1211111 1112356889999999999998
Q ss_pred hCC-C-CcccccccchhhHHHHHHH---HcCCeEEE
Q psy10463 388 IGA-Y-DEEMQVWGGENLEMSFRVW---QCGGSIEI 418 (605)
Q Consensus 388 iGg-f-De~~~~~g~ED~dl~~Rl~---~~G~~i~~ 418 (605)
|-. . ...+..+..||+-+..=+. ..|.++.+
T Consensus 556 L~~~s~s~~l~~f~lEDVyvGi~l~~l~k~gl~v~~ 591 (636)
T PLN03133 556 VYKRHKEGRLKMFKLEDVAMGIWIAEMKKEGLEVKY 591 (636)
T ss_pred HHHhhhhcccCcCChhhHhHHHHHHHhcccCCCcee
Confidence 832 1 1234445689988766543 23544433
No 286
>PF04748 Polysacc_deac_2: Divergent polysaccharide deacetylase; InterPro: IPR006837 This is a family of uncharacterised proteins that includes YibQ.; PDB: 2QV5_A 2NLY_A.
Probab=41.64 E-value=2.5e+02 Score=27.13 Aligned_cols=157 Identities=17% Similarity=0.168 Sum_probs=73.3
Q ss_pred EEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhhhccCceEEEecCccccccccccccCCcceEEEE
Q psy10463 126 LLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLVFNEEFLPKSSIVIV 205 (605)
Q Consensus 126 ivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~~a~g~~i~~lD~d~~~~~~~~~~~~p~vSVIIp 205 (605)
|||||...+.. ..+.+...+..+.+-..+.. -.+......++.+.-++++-+--...-. .+..+. .+..
T Consensus 1 IIIDD~G~~~~----~~~~l~~Lp~pvT~ai~P~~-~~~~~~a~~a~~~G~EvllhlPMep~~~-~~~gp~-----~L~~ 69 (213)
T PF04748_consen 1 IIIDDLGYNLA----TAEALLALPFPVTFAILPYA-PYSREWAERARAAGHEVLLHLPMEPKGY-KDPGPG-----ALLT 69 (213)
T ss_dssp EEEEEETSHHC----CHHHHHCSSTTCEEEEETTS-TTHHHHHHHHHHCT-EEEEEEEE--TTT-T---TT------B-T
T ss_pred CEEECCCCChH----HHHHHHhCCCCeEEEECCCC-CChHHHHHHHHHcCCEEEEeCCCCCCCC-CCcccc-----cccC
Confidence 68888887543 23445666777776555542 2334444444566667776553111110 111100 0111
Q ss_pred eechhhHHHHHHHHHHHhcCCCCCceeEEEeeC--CCCh----HHHHHHHHHHHHHCCCCEEEE---eCCCCCChHHHHH
Q psy10463 206 FHNEAWSALLRTVHSVISRSPRSMLKEILLVDD--ASTR----EFLKSSLDEYVAKLSVPTRVI---RSPGRVGLIKARL 276 (605)
Q Consensus 206 ~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd--~S~d----~~~~~~l~~~~~~~~~~v~~i---~~~~n~G~~~arN 276 (605)
.. .+ +.+.+.+...+++-+.. +-|.| ||-- .....+++.+.+ . ..-++ ..+...+...|+.
T Consensus 70 ~~-~~-~~i~~~l~~al~~vp~a-----~GvnNhmGS~~T~~~~~m~~vl~~l~~-~--gl~FvDS~T~~~s~a~~~A~~ 139 (213)
T PF04748_consen 70 GM-SE-EEIRKRLEAALARVPGA-----VGVNNHMGSRFTSDREAMRWVLEVLKE-R--GLFFVDSRTTPRSVAPQVAKE 139 (213)
T ss_dssp TS--H-HHHHHHHHHHHCCSTT------SEEEEEE-CCHHC-HHHHHHHHHHHHH-T--T-EEEE-S--TT-SHHHHHHH
T ss_pred CC-CH-HHHHHHHHHHHHHCCCc-----EEEecCCCccccCCHHHHHHHHHHHHH-c--CCEEEeCCCCcccHHHHHHHH
Confidence 11 12 67888888888887632 23433 4432 223334444433 2 35555 2333445566666
Q ss_pred HHHhhccCCEEEEecCCcccCcChHHHHHHH
Q psy10463 277 LGARQAEGEILVFLDAHCECTLGWLENLVAR 307 (605)
Q Consensus 277 ~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~ 307 (605)
.|+..+.-++ |||++ .+.+.+...+..
T Consensus 140 ~gvp~~~rdv--fLD~~--~~~~~I~~ql~~ 166 (213)
T PF04748_consen 140 LGVPAARRDV--FLDND--QDEAAIRRQLDQ 166 (213)
T ss_dssp CT--EEE-SE--ETTST---SHHHHHHHHHH
T ss_pred cCCCEEeece--ecCCC--CCHHHHHHHHHH
Confidence 7776666554 88887 445555554444
No 287
>KOG2288|consensus
Probab=41.62 E-value=90 Score=30.82 Aligned_cols=119 Identities=17% Similarity=0.166 Sum_probs=71.6
Q ss_pred HHHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchh
Q psy10463 277 LGARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSD 356 (605)
Q Consensus 277 ~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~ 356 (605)
.+.++-..+|.+=.|+|+.+..+-|..+++....++....+.+- .+......+..| ..-.
T Consensus 102 ~A~~~~daeFyvKvDDDv~v~l~~L~~~la~~r~~pr~YiGcmk-----------sg~v~~~~~~kw------~Epe--- 161 (274)
T KOG2288|consen 102 AAVAHWDAEFYVKVDDDVYVRLARLGTLLARERSHPRLYIGCMK-----------SGPVLTQPGGKW------YEPE--- 161 (274)
T ss_pred HHHHhccceEEEEccccceecHHHHHHHHHhhccCCceEEEEec-----------CCccccCCCCcc------cChh---
Confidence 34555688999999999999999999999888887776655331 111110101111 1100
Q ss_pred HhhhccCCCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcCCeEEEecc
Q psy10463 357 AIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCGGSIEIAPC 421 (605)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~ 421 (605)
.. ....... .+...|+..+++++...-|----.-+..|..||+ ++-.|+.|..+..+-+
T Consensus 162 Wk--fg~~g~Y--frhA~G~~YvlS~dLa~yi~in~~lL~~y~nEDV--SlGaW~~gldV~h~dd 220 (274)
T KOG2288|consen 162 WK--FGDNGNY--FRHATGGGYVLSKDLATYISINRQLLHKYANEDV--SLGAWMIGLDVEHVDD 220 (274)
T ss_pred hh--cCccccc--chhccCceEEeeHHHHHHHHHhHHHHHhhccCCc--ccceeeeeeeeeEecC
Confidence 00 0111112 2356788899999987765433333566777876 6678988877655543
No 288
>PRK14354 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=41.31 E-value=3.4e+02 Score=29.33 Aligned_cols=89 Identities=16% Similarity=0.082 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhcc--CCEEEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAE--GEILVF 289 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~--gd~i~f 289 (605)
+.+..+|.++.+... .++++|-.. ..+. ++++.. ..+.++..+...|.+.+...++.... .+.+++
T Consensus 31 pli~~~l~~l~~~gi----~~iivvv~~-~~~~----i~~~~~---~~~~~~~~~~~~g~~~al~~a~~~l~~~~d~vlv 98 (458)
T PRK14354 31 PMVEHVVDSVKKAGI----DKIVTVVGH-GAEE----VKEVLG---DRSEFALQEEQLGTGHAVMQAEEFLADKEGTTLV 98 (458)
T ss_pred cHHHHHHHHHHhCCC----CeEEEEeCC-CHHH----HHHHhc---CCcEEEEcCCCCCHHHHHHHHHHHhcccCCeEEE
Confidence 567777777765422 355554322 2221 233322 24566666666788777777766543 478999
Q ss_pred ecCCc-ccCcChHHHHHHHHHcCC
Q psy10463 290 LDAHC-ECTLGWLENLVARVAEDR 312 (605)
Q Consensus 290 lD~D~-~~~~~~L~~ll~~~~~~~ 312 (605)
+++|. .+.+..|+.+++...+..
T Consensus 99 ~~~D~p~i~~~~l~~li~~~~~~~ 122 (458)
T PRK14354 99 ICGDTPLITAETLKNLIDFHEEHK 122 (458)
T ss_pred EECCccccCHHHHHHHHHHHHhcC
Confidence 99998 568889999998876543
No 289
>PLN02728 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Probab=41.17 E-value=2.2e+02 Score=28.19 Aligned_cols=92 Identities=20% Similarity=0.229 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhc--cCCEEEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQA--EGEILVF 289 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A--~gd~i~f 289 (605)
+.+..+++.+.+.... .+|+||-.....+ .++.....++..+.++. ...+.....-.|++.. ..+++++
T Consensus 53 pll~~tl~~~~~~~~i---~~IvVV~~~~~~~----~~~~~~~~~~~~i~~v~--gg~~r~~SV~~gl~~l~~~~~~Vli 123 (252)
T PLN02728 53 PIALYSLYTFARMPEV---KEIVVVCDPSYRD----VFEEAVENIDVPLKFAL--PGKERQDSVFNGLQEVDANSELVCI 123 (252)
T ss_pred EHHHHHHHHHHhCCCC---CeEEEEeCHHHHH----HHHHHHHhcCCceEEcC--CCCchHHHHHHHHHhccCCCCEEEE
Confidence 4667777776653222 4777775432122 23333344443455442 2233344455566654 3578888
Q ss_pred ecCCcc-cCcChHHHHHHHHHcCC
Q psy10463 290 LDAHCE-CTLGWLENLVARVAEDR 312 (605)
Q Consensus 290 lD~D~~-~~~~~L~~ll~~~~~~~ 312 (605)
.|++.- ++++.++.+++...+..
T Consensus 124 hDaarP~vs~~~i~~li~~~~~~g 147 (252)
T PLN02728 124 HDSARPLVTSADIEKVLKDAAVHG 147 (252)
T ss_pred ecCcCCCCCHHHHHHHHHHHhhCC
Confidence 898765 68999999999887654
No 290
>PF01697 Glyco_transf_92: Glycosyltransferase family 92; InterPro: IPR008166 This entry represents a region approximately 300 residues long that is of unknown function. The aligned region contains several conserved cysteine residues and several charged residues that may be catalytic residues.
Probab=40.25 E-value=3.5e+02 Score=26.84 Aligned_cols=88 Identities=20% Similarity=0.246 Sum_probs=55.8
Q ss_pred EEEEE-Eee-cCc-hHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecC----------
Q psy10463 92 SSIVI-VFH-NEA-WSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSP---------- 158 (605)
Q Consensus 92 ~Siii-p~y-N~~-~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~---------- 158 (605)
++|+| |.| |+. |..|.+=|+.-..+. ..-+.+-|..+++.. ..+|+.|.+.. .|.++.-+
T Consensus 3 ~~vCv~pl~~~~~~~~~l~e~ie~~~~~G----~~~~~~Y~~~~~~~~-~~vL~~Y~~~g--~v~~~~w~~~~~~~~~~~ 75 (285)
T PF01697_consen 3 FVVCVSPLFGNEDDWLQLIEWIEYHRLLG----VDHFYFYDNSSSPSV-RKVLKEYERSG--YVEVIPWPLRPKFPDFPS 75 (285)
T ss_pred EEEEccchhcccccHHHHHHHHHHHHHhC----CCEEEEEEccCCHHH-HHhHHHHhhcC--eEEEEEcccccccCCccc
Confidence 44555 444 442 347777777665553 246777777777764 77788887763 46655543
Q ss_pred ---------CCcchHHHHHHHhhhc--cCceEEEecCcc
Q psy10463 159 ---------GRVGLIKARLLGARQA--EGEILVFLDAHC 186 (605)
Q Consensus 159 ---------~~~G~~~a~n~g~~~a--~g~~i~~lD~d~ 186 (605)
...|...|.|-.+... ..+|++|+|-|.
T Consensus 76 ~~~~~~~~~~~~~q~~a~~DCl~r~~~~~~~v~f~DiDE 114 (285)
T PF01697_consen 76 PFPDPNSSVERRGQIAAYNDCLLRYRYRAKWVAFIDIDE 114 (285)
T ss_pred chhhhhhHHHHHHHHHHHHHHHHHhhhhceEEEEecccc
Confidence 1234566667766666 467899999998
No 291
>PRK14359 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=39.84 E-value=4.9e+02 Score=27.71 Aligned_cols=87 Identities=14% Similarity=0.088 Sum_probs=48.1
Q ss_pred EeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCC--CCChHHHHHHHHhhc
Q psy10463 205 VFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG--RVGLIKARLLGARQA 282 (605)
Q Consensus 205 p~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~--n~G~~~arN~G~~~A 282 (605)
|.-+. +.+.+.++.+... . .+|+||- +...+. +.++..+....++++..+. ..|.+.|... + ..
T Consensus 26 pi~gk--Pli~~~i~~l~~~-~----~~i~Ivv-~~~~~~----i~~~~~~~~~~v~~~~~~~~~~~gt~~al~~-~-~~ 91 (430)
T PRK14359 26 TICGK--PMLFYILKEAFAI-S----DDVHVVL-HHQKER----IKEAVLEYFPGVIFHTQDLENYPGTGGALMG-I-EP 91 (430)
T ss_pred EECCc--cHHHHHHHHHHHc-C----CcEEEEE-CCCHHH----HHHHHHhcCCceEEEEecCccCCCcHHHHhh-c-cc
Confidence 44444 4777778877754 1 2454443 233332 3333433322678876543 2565555433 2 22
Q ss_pred cCCEEEEecCCcc-cCcChHHHHH
Q psy10463 283 EGEILVFLDAHCE-CTLGWLENLV 305 (605)
Q Consensus 283 ~gd~i~flD~D~~-~~~~~L~~ll 305 (605)
..+.++++++|.. ..+..++.++
T Consensus 92 ~~d~vlv~~gD~p~~~~~~l~~l~ 115 (430)
T PRK14359 92 KHERVLILNGDMPLVEKDELEKLL 115 (430)
T ss_pred CCCeEEEEECCccCCCHHHHHHHH
Confidence 4688999999984 4666666654
No 292
>PF05212 DUF707: Protein of unknown function (DUF707); InterPro: IPR007877 This family consists of uncharacterised proteins from Arabidopsis thaliana.
Probab=39.37 E-value=4.2e+02 Score=26.81 Aligned_cols=138 Identities=15% Similarity=0.064 Sum_probs=75.5
Q ss_pred hccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhhh
Q psy10463 281 QAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIK 360 (605)
Q Consensus 281 ~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~ 360 (605)
.+..|||++.|.|..++.--++++++.+++..-.+..|.++.-.. .+.+.-... ... ..++. ...+.. .-
T Consensus 114 v~~YdYiflwDeDL~vd~f~~~ry~~Ivk~~gLeISQPALd~~~~-~~~~~iT~R--~~~--~~vhr--~~~~~~---~~ 183 (294)
T PF05212_consen 114 VAPYDYIFLWDEDLGVDHFDINRYFEIVKKEGLEISQPALDPDSS-EIHHPITKR--RPD--SEVHR--KTRGGP---RC 183 (294)
T ss_pred hccceeEEecCCccCcCcCCHHHHHHHHHHhCCcccCcccCCCCc-eeeeeEEee--cCC--ceeEe--ccCCCC---Cc
Confidence 468899999999999999999999999999888888887642111 011110000 000 00000 000000 00
Q ss_pred ccCCCCccccccccceEEEEeHHHHhHhCC-CCcc-cccccchhhHHHHHHHHcCCeEEEecceEEEEEcc
Q psy10463 361 RKDFTEPFKTPAMAGGLFAIDRAYFFHIGA-YDEE-MQVWGGENLEMSFRVWQCGGSIEIAPCSHVAHLFR 429 (605)
Q Consensus 361 ~~~~~~~~~~~~~~G~~~~i~r~~f~~iGg-fDe~-~~~~g~ED~dl~~Rl~~~G~~i~~~p~s~v~H~~r 429 (605)
..+.+.|--+..+-.-.=.++|++|.-+=. +-.+ ..+| |=|+-+..-+-....+|.++-..-|.|..-
T Consensus 184 ~~~~~~ppct~fVEiMAPVFSr~Awrcvw~miqNDLvhGW-GLDf~~~~c~~~~~~kiGVVDs~~VvH~gv 253 (294)
T PF05212_consen 184 CDDSTGPPCTGFVEIMAPVFSRAAWRCVWHMIQNDLVHGW-GLDFKWGYCAGDRHKKIGVVDSQYVVHTGV 253 (294)
T ss_pred CCCCCCCCcceEEEEecceechHHHHHHHhcccCCCcccc-chhhhHHHHhccccccEEEEeeEEEEEcCC
Confidence 001111111111111112478999887643 2222 3566 556666666655668899998888888753
No 293
>KOG2733|consensus
Probab=38.52 E-value=2.8e+02 Score=29.05 Aligned_cols=99 Identities=13% Similarity=0.130 Sum_probs=64.7
Q ss_pred CCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCC--ChHHH
Q psy10463 197 LPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRV--GLIKA 274 (605)
Q Consensus 197 ~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~--G~~~a 274 (605)
.+..|+-|.-+|+. .|.+.|+-+-+.+.+++.-++|+|-|.++..++. +.++ ..++|-+-.-. =.+.+
T Consensus 31 ~~~~slavAGRn~~--KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~----emak----~~~vivN~vGPyR~hGE~ 100 (423)
T KOG2733|consen 31 FEGLSLAVAGRNEK--KLQEVLEKVGEKTGTDLSSSVILIADSANEASLD----EMAK----QARVIVNCVGPYRFHGEP 100 (423)
T ss_pred ccCceEEEecCCHH--HHHHHHHHHhhccCCCcccceEEEecCCCHHHHH----HHHh----hhEEEEeccccceecCcH
Confidence 67789999999986 8889999888888777777889998888777644 4444 34444432200 02233
Q ss_pred HHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHc
Q psy10463 275 RLLGARQAEGEILVFLDAHCECTLGWLENLVARVAE 310 (605)
Q Consensus 275 rN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~ 310 (605)
.-.+.-.+...++ |+-=+|.|+|.|.....+
T Consensus 101 VVkacienG~~~v-----DISGEP~f~E~mq~kYhd 131 (423)
T KOG2733|consen 101 VVKACIENGTHHV-----DISGEPQFMERMQLKYHD 131 (423)
T ss_pred HHHHHHHcCCcee-----ccCCCHHHHHHHHHHHHH
Confidence 3333333444443 555689999999876533
No 294
>PF03214 RGP: Reversibly glycosylated polypeptide; InterPro: IPR004901 Alpha-1,4-glucan-protein synthase catalyses the reaction: protein + UDP-D-glucose = alpha-D-glucosyl-protein + UDP The enzyme has a possible role in the synthesis of cell wall polysaccharides in plants []. It is found associated with the cell wall, with the highest concentrations in the plasmodesmata. It is also located in the Golgi apparatus.; GO: 0008466 glycogenin glucosyltransferase activity, 0016758 transferase activity, transferring hexosyl groups, 0007047 cellular cell wall organization, 0030244 cellulose biosynthetic process, 0005618 cell wall, 0030054 cell junction
Probab=38.16 E-value=28 Score=35.56 Aligned_cols=93 Identities=17% Similarity=0.186 Sum_probs=54.6
Q ss_pred cEEEEEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHH---hcCCCeEEeecCCCcc--hHH
Q psy10463 91 KSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVA---KLSVPTRVIRSPGRVG--LIK 165 (605)
Q Consensus 91 ~~Siiip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~---~~~~~v~~~~~~~~~G--~~~ 165 (605)
.+.||||+-........+.-++++.. +-+|||-|+-..+.++. .+-+-- ..+.-.+++-.+.... -.+
T Consensus 9 ~~divi~~~~~~l~~~~~~wr~~~~~------~hliiv~d~~~~~~~~~-p~g~~~~~y~~~di~~~lg~~~~i~~~~~a 81 (348)
T PF03214_consen 9 EVDIVIPALRPNLTDFLEEWRPFFSP------YHLIIVQDPDPNEEIKV-PEGFDYEVYNRNDIERVLGAKTLIPFKGDA 81 (348)
T ss_pred cccEEeecccccHHHHHHHHHHhhcc------eeEEEEeCCCccccccC-CcccceeeecHhhHHhhcCCcccccccccc
Confidence 47899999986644445555555543 58999999876654221 000000 0000011222221112 245
Q ss_pred HHHHHhhhccCceEEEecCcccccc
Q psy10463 166 ARLLGARQAEGEILVFLDAHCECTL 190 (605)
Q Consensus 166 a~n~g~~~a~g~~i~~lD~d~~~~~ 190 (605)
.||.|.-.|+-+|++++|.|+-+..
T Consensus 82 ~R~fGyL~s~~~yivsiDDD~~P~~ 106 (348)
T PF03214_consen 82 CRNFGYLVSKKDYIVSIDDDCLPAK 106 (348)
T ss_pred hhhhHhhhcccceEEEEcccccccc
Confidence 6899999999999999998886654
No 295
>KOG1111|consensus
Probab=38.11 E-value=1.6e+02 Score=30.72 Aligned_cols=55 Identities=16% Similarity=0.279 Sum_probs=42.5
Q ss_pred eechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeC
Q psy10463 206 FHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRS 265 (605)
Q Consensus 206 ~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~ 265 (605)
.||...+.|.+.|.++.++.+. .++|++-||.....+++.++++.-. .++.++-.
T Consensus 205 vyrKGiDll~~iIp~vc~~~p~---vrfii~GDGPk~i~lee~lEk~~l~--~rV~~lG~ 259 (426)
T KOG1111|consen 205 VYRKGIDLLLEIIPSVCDKHPE---VRFIIIGDGPKRIDLEEMLEKLFLQ--DRVVMLGT 259 (426)
T ss_pred eeccchHHHHHHHHHHHhcCCC---eeEEEecCCcccchHHHHHHHhhcc--CceEEecc
Confidence 4777768889999999988865 4999999999887788888776443 36776643
No 296
>KOG3765|consensus
Probab=37.47 E-value=2.5e+02 Score=29.84 Aligned_cols=156 Identities=12% Similarity=0.109 Sum_probs=79.8
Q ss_pred hHHHHHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHc---C--CcEEEeeeEeeecCC-eeEEeccc--ccceeeee
Q psy10463 271 LIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAE---D--RTRVVCPVIDIISDV-TFAYVRSF--ELHWGAFN 342 (605)
Q Consensus 271 ~~~arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~---~--~~~vv~p~i~~i~~~-~~~~~~~~--~~~~g~~~ 342 (605)
+...||.|-+.|.++|++..|.|..+..+.-+.+-..+.+ . ....+.|..+..... .+-..... .....+.-
T Consensus 179 ~Nl~RNvAr~ga~t~~~l~sD~dm~~S~gl~~~~~~~~~ql~~~~~~~vlvi~~FE~~~~~~~~P~~k~eL~~~~~~~~~ 258 (386)
T KOG3765|consen 179 FNLMRNVARKGANTDYMLMSDIDMVPSYGLADMLKKILNQLDDGKKKKVLVIPAFETDLPNALFPHNKDELLVLLCNGTA 258 (386)
T ss_pred hHHHHHHHHhhcCCCcEEEEeeeeeeccchHHHHHHHHHHhhcccccEEEEeeehhcccccccccCCHHHHHHHHhcCCc
Confidence 5678999999999999999999999988776655443332 1 234555554333221 11111000 00011111
Q ss_pred ccceeeEeecCchhHhh----hccC---CCCccccc--cccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHHHcC
Q psy10463 343 WELHFRWYTYGSSDAII----KRKD---FTEPFKTP--AMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVWQCG 413 (605)
Q Consensus 343 ~~l~~~~~~~~~~~~~~----~~~~---~~~~~~~~--~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~~~G 413 (605)
+.++.++++.....-.. .... ...+...+ ........+.+ +.-.||+.+...|..=.-..+.+...+
T Consensus 259 ~~Fh~~~~~~~h~~~n~~~w~~~s~~s~~~~~~~v~~~~~~Ep~~vl~~----~~p~yd~ry~~~g~~~~s~~y~lc~~~ 334 (386)
T KOG3765|consen 259 RPFHHKYFPICHEGTNLSEWVNHGNRSLEHTVYLVAYRNSWEPQVVLHR----EDPAYDERYFPLGHNKQSQVYTLCGAE 334 (386)
T ss_pred ccceeccccccccCCCccceeecCCcccccchhhhhhccCCccEEEccC----CCcchhhhhCccccchHHHHHHHHhcC
Confidence 22222222211110000 0000 00000000 11112223333 224588888877766666677888899
Q ss_pred CeEEEecceEEEEEccc
Q psy10463 414 GSIEIAPCSHVAHLFRK 430 (605)
Q Consensus 414 ~~i~~~p~s~v~H~~r~ 430 (605)
+...+.+.+...|..-.
T Consensus 335 Y~f~vl~~~f~vHk~~~ 351 (386)
T KOG3765|consen 335 YEFLVLSLAFTVHKGLK 351 (386)
T ss_pred CeeeecccceeeecCcc
Confidence 99999999998887543
No 297
>PLN02189 cellulose synthase
Probab=37.40 E-value=1.7e+02 Score=35.01 Aligned_cols=82 Identities=10% Similarity=0.052 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHhc--CCccCcceEEEEeCCCc--------hhhHHHHHHHHHH------hcCCCeEEeecCCCcch----
Q psy10463 104 SALLRTVHSVISR--SPRSMLKEILLVDDAST--------REFLKSSLDEYVA------KLSVPTRVIRSPGRVGL---- 163 (605)
Q Consensus 104 ~~l~~~l~sv~~~--~~~~~~~EiivvdD~S~--------d~~~~~~~~~~~~------~~~~~v~~~~~~~~~G~---- 163 (605)
+.++.-|+++.++ ..+ .|--+.+||+. -.++.+++.+--. ..-|.+.++..+++-|+
T Consensus 439 Ee~kvRI~~l~a~~~~~p---~~~~~m~dGt~W~g~~~~dHp~IiQVll~~~~~~d~~g~~lP~LVYVSREKrPg~~Hh~ 515 (1040)
T PLN02189 439 EEFKVRINAIVAKAQKVP---PEGWIMQDGTPWPGNNTRDHPGMIQVFLGHSGGHDTEGNELPRLVYVSREKRPGFQHHK 515 (1040)
T ss_pred HHHHHHHHHHHhhcCccC---CccceeccCccCCCCCCCCCHHHHHHHhcCCCCccccccccceeEEEeccCCCCCCccc
Confidence 5566667766522 333 35567899981 1222222211000 01134888888888885
Q ss_pred -HHHHHHHhh----hccCceEEEecCcccc
Q psy10463 164 -IKARLLGAR----QAEGEILVFLDAHCEC 188 (605)
Q Consensus 164 -~~a~n~g~~----~a~g~~i~~lD~d~~~ 188 (605)
++|.|..++ .+.|++++.||+|-.+
T Consensus 516 KAGAMNaLlRVSavmTNaPfILNLDCDmY~ 545 (1040)
T PLN02189 516 KAGAMNALIRVSAVLTNAPFMLNLDCDHYI 545 (1040)
T ss_pred chhhHHHHHHHhhhccCCCeEEEccCcccc
Confidence 889999994 4589999999999866
No 298
>PRK09451 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=37.01 E-value=2.6e+02 Score=30.34 Aligned_cols=89 Identities=13% Similarity=0.119 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhc-cCCEEEEe
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQA-EGEILVFL 290 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A-~gd~i~fl 290 (605)
+.+.+.++.+.+... .+|++|-.. ..+ .++++... .++.++..+...|.+.+.-.|+... ..+.++++
T Consensus 34 pli~~~i~~l~~~gi----~~i~vv~~~-~~~----~i~~~~~~--~~~~~i~~~~~~Gt~~al~~a~~~l~~~~~vlV~ 102 (456)
T PRK09451 34 PMVQHVIDAANELGA----QHVHLVYGH-GGD----LLKQTLAD--EPLNWVLQAEQLGTGHAMQQAAPFFADDEDILML 102 (456)
T ss_pred hHHHHHHHHHHhcCC----CcEEEEECC-CHH----HHHHhhcc--CCcEEEECCCCCCcHHHHHHHHHhhccCCcEEEE
Confidence 567777777765421 366666432 122 23333322 2577777777788888877777654 34788999
Q ss_pred cCCc-ccCcChHHHHHHHHHcC
Q psy10463 291 DAHC-ECTLGWLENLVARVAED 311 (605)
Q Consensus 291 D~D~-~~~~~~L~~ll~~~~~~ 311 (605)
++|. .+.+..++.+++...+.
T Consensus 103 ~gD~P~i~~~~i~~l~~~~~~~ 124 (456)
T PRK09451 103 YGDVPLISVETLQRLRDAKPQG 124 (456)
T ss_pred eCCcccCCHHHHHHHHHHhhcC
Confidence 9998 46778888888765443
No 299
>PRK00576 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional
Probab=35.22 E-value=2.3e+02 Score=25.99 Aligned_cols=55 Identities=18% Similarity=0.227 Sum_probs=37.2
Q ss_pred EEEEeCCC-CCChHHHHHHHHhhc---cCCEEEEecCCcc-cCcChHHHHHHHHHcCCcE
Q psy10463 260 TRVIRSPG-RVGLIKARLLGARQA---EGEILVFLDAHCE-CTLGWLENLVARVAEDRTR 314 (605)
Q Consensus 260 v~~i~~~~-n~G~~~arN~G~~~A---~gd~i~flD~D~~-~~~~~L~~ll~~~~~~~~~ 314 (605)
++++.... ..|...+.-.|++.+ ..++++++=+|+- ++++.++.|++........
T Consensus 47 ~~~i~d~~~g~gpl~~~~~gl~~~~~~~~~~~lv~~~DmP~i~~~~i~~L~~~~~~~~~~ 106 (178)
T PRK00576 47 APVLRDELRGLGPLPATGRGLRAAAEAGARLAFVCAVDMPYLTVELIDDLARPAAQTDAE 106 (178)
T ss_pred CCEeccCCCCCCcHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCHHHHHHHHHHhhcCCCc
Confidence 45554332 245556555566544 5799999999997 5899999999876554433
No 300
>COG1211 IspD 4-diphosphocytidyl-2-methyl-D-erithritol synthase [Lipid metabolism]
Probab=34.79 E-value=3.6e+02 Score=26.41 Aligned_cols=90 Identities=12% Similarity=0.167 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhcc---CCEEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAE---GEILV 288 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~---gd~i~ 288 (605)
..+..+|..++.... ..|||||-....++....... ...+.++.++.-. .........|++... .++++
T Consensus 33 pll~~tl~~f~~~~~---i~~Ivvv~~~~~~~~~~~~~~---~~~~~~v~~v~GG--~~R~~SV~~gL~~~~~~~~~~Vl 104 (230)
T COG1211 33 PLLEHTLEAFLESPA---IDEIVVVVSPEDDPYFEKLPK---LSADKRVEVVKGG--ATRQESVYNGLQALSKYDSDWVL 104 (230)
T ss_pred EehHHHHHHHHhCcC---CCeEEEEEChhhhHHHHHhhh---hccCCeEEEecCC--ccHHHHHHHHHHHhhccCCCEEE
Confidence 467788887776443 258998876655554332222 2223367777532 234555667776665 78999
Q ss_pred EecCCcc-cCcChHHHHHHHHH
Q psy10463 289 FLDAHCE-CTLGWLENLVARVA 309 (605)
Q Consensus 289 flD~D~~-~~~~~L~~ll~~~~ 309 (605)
..|+==- ++++-++++++...
T Consensus 105 vHDaaRPf~~~~~i~~li~~~~ 126 (230)
T COG1211 105 VHDAARPFLTPKLIKRLIELAD 126 (230)
T ss_pred EeccccCCCCHHHHHHHHHhhc
Confidence 9988644 58888999994433
No 301
>PRK10122 GalU regulator GalF; Provisional
Probab=33.61 E-value=5.2e+02 Score=26.20 Aligned_cols=54 Identities=19% Similarity=0.167 Sum_probs=37.8
Q ss_pred CEEEEeCCCCCChHHHHHHHHhhcc-CCEEEEecCCcccCcC-------hHHHHHHHHHcCCc
Q psy10463 259 PTRVIRSPGRVGLIKARLLGARQAE-GEILVFLDAHCECTLG-------WLENLVARVAEDRT 313 (605)
Q Consensus 259 ~v~~i~~~~n~G~~~arN~G~~~A~-gd~i~flD~D~~~~~~-------~L~~ll~~~~~~~~ 313 (605)
++.++.+++..|.+.|.-.+...-. .++++++ +|..+.++ -+..+++...+...
T Consensus 98 ~i~~~~q~~~lGtg~al~~a~~~l~~~~fvvi~-gD~l~~~~~~~~~~~dl~~li~~h~~~~~ 159 (297)
T PRK10122 98 TIMNVRQGQPLGLGHSILCARPAIGDNPFVVVL-PDVVIDDASADPLRYNLAAMIARFNETGR 159 (297)
T ss_pred eEEEeecCCcCchHHHHHHHHHHcCCCCEEEEE-CCeeccCccccccchhHHHHHHHHHHhCC
Confidence 5777888888999999877776653 4666665 77766543 47888887665443
No 302
>PF07598 DUF1561: Protein of unknown function (DUF1561); InterPro: IPR011455 This is a family of paralogous proteins in Leptospira interrogans.
Probab=32.12 E-value=82 Score=34.59 Aligned_cols=78 Identities=17% Similarity=0.291 Sum_probs=46.3
Q ss_pred cccccccccccccCCCCCCCCCCeEEeecCCCCCcceEEEEecCCceee---cCCCeeeecCC---CCCCCCCceEEEeC
Q psy10463 519 HVQTHKCVEKPLAKGSMNQASGPASLLPCTHLPVLTQMFVMKLPTDLIA---TDESVCLDVPE---YENDISPRVRILAC 592 (605)
Q Consensus 519 ~~~~~~CLD~~~~~~~~~~~g~~v~l~~C~~~~~~nQ~w~~~~~~g~i~---~~~~~CLd~~~---~~~~~g~~v~l~~C 592 (605)
+.+...|..-.-.++ .+-+.+-.|......+-+ |+ --+.|- ++.=+|+.++. .++++-.-|.|.+|
T Consensus 44 h~g~~yCY~P~F~~G-----EsYi~i~~C~~~~v~~AR--YD-vFqRIswnin~tWLCmTAP~sVtk~~~~WdYl~LRPC 115 (632)
T PF07598_consen 44 HDGGEYCYAPVFSGG-----ESYIYIEDCSSSHVMKAR--YD-VFQRISWNINNTWLCMTAPESVTKSTANWDYLLLRPC 115 (632)
T ss_pred cCCCceEecceecCC-----ceeEEEecccCcccchhh--hc-eeeeEEEEeCCEEEEEecCchhcccccccceEEEeee
Confidence 345778987432211 257889999321111211 22 112221 12349999987 34455678999999
Q ss_pred CCCC-CcceEeCC
Q psy10463 593 SGFN-RQRWTYDK 604 (605)
Q Consensus 593 ~~~~-~Q~W~~~~ 604 (605)
-=++ +|+|.+..
T Consensus 116 vINDpnQrWIIKd 128 (632)
T PF07598_consen 116 VINDPNQRWIIKD 128 (632)
T ss_pred eECCCCceEEEeC
Confidence 8777 99998754
No 303
>PLN02893 Cellulose synthase-like protein
Probab=32.05 E-value=94 Score=35.76 Aligned_cols=86 Identities=16% Similarity=0.113 Sum_probs=56.8
Q ss_pred chHHHHHHHhhhccCceEEEecCccccccccccccCCcceEEEEe---echhhHHHHHHHHHHHhcCCCCCceeEEEeeC
Q psy10463 162 GLIKARLLGARQAEGEILVFLDAHCECTLVFNEEFLPKSSIVIVF---HNEAWSALLRTVHSVISRSPRSMLKEILLVDD 238 (605)
Q Consensus 162 G~~~a~n~g~~~a~g~~i~~lD~d~~~~~~~~~~~~p~vSVIIp~---~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd 238 (605)
++.-..++..+...-....++|.=. ....+..+|.|.|.|+| +.|+.-....++-|+++-+||....-+.|-||
T Consensus 68 ~f~W~l~q~~k~~Pv~r~~~~~~L~---~~~~~~~lP~vDvfv~TaDP~~Epp~~~~ntvLSilA~dyp~~kls~YvSDD 144 (734)
T PLN02893 68 AFMWATTQAFRMCPVHRRVFIEHLE---HYAKESDYPGLDVFICTADPYKEPPMGVVNTALSVMAYDYPTEKLSVYVSDD 144 (734)
T ss_pred HHHHHHccCccccccccccCHHHHh---hhcccccCCcceeeeccCCcccCchHHHHHHHHHHHhhccCccceEEEEecC
Confidence 3334444444444444444444221 11223569999999999 66774567899999999999887788999999
Q ss_pred CCChHHHHHHHH
Q psy10463 239 ASTREFLKSSLD 250 (605)
Q Consensus 239 ~S~d~~~~~~l~ 250 (605)
|.+.-+.....|
T Consensus 145 Ggs~lt~~al~E 156 (734)
T PLN02893 145 GGSKLTLFAFME 156 (734)
T ss_pred CccHHHHHHHHH
Confidence 998766554443
No 304
>TIGR01479 GMP_PMI mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase. This enzyme is known to be bifunctional, as both mannose-6-phosphate isomerase (EC 5.3.1.8) (PMI) and mannose-1-phosphate guanylyltransferase (EC 2.7.7.22) in Pseudomonas aeruginosa, Xanthomonas campestris, and Gluconacetobacter xylinus. The literature on the enzyme from E. coli attributes mannose-6-phosphate isomerase activity to an adjacent gene, but the present sequence has not been shown to lack the activity. The PMI domain is C-terminal.
Probab=31.66 E-value=3.4e+02 Score=29.64 Aligned_cols=92 Identities=18% Similarity=0.160 Sum_probs=51.5
Q ss_pred chhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCC-CEEEEeCCCCCChHHHHHHHHhhc----
Q psy10463 208 NEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSV-PTRVIRSPGRVGLIKARLLGARQA---- 282 (605)
Q Consensus 208 n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~-~v~~i~~~~n~G~~~arN~G~~~A---- 282 (605)
+.. +.|..++..+..... .+++||-+..... .+.+....++. ...++..+...|-+.|.-.++...
T Consensus 31 g~~-~ll~~tl~~l~~~~~----~~iviv~~~~~~~----~~~~~l~~~~~~~~~~i~Ep~~~gTa~ai~~aa~~~~~~~ 101 (468)
T TIGR01479 31 GDL-TMLQQTLKRLAGLPC----SSPLVICNEEHRF----IVAEQLREIGKLASNIILEPVGRNTAPAIALAALLAARRN 101 (468)
T ss_pred CCC-cHHHHHHHHHhcCCC----cCcEEecCHHHHH----HHHHHHHHcCCCcceEEecccccCchHHHHHHHHHHHHHH
Confidence 434 677888887765432 3666664321111 22333333321 245777777777766654444332
Q ss_pred -cCCEEEEecCCcccC-cChHHHHHHHH
Q psy10463 283 -EGEILVFLDAHCECT-LGWLENLVARV 308 (605)
Q Consensus 283 -~gd~i~flD~D~~~~-~~~L~~ll~~~ 308 (605)
..++++++.+|..+. +.-+..+++..
T Consensus 102 ~~~~~vlVl~~D~~i~~~~~f~~~l~~~ 129 (468)
T TIGR01479 102 GEDPLLLVLAADHVITDEDAFQAAVKLA 129 (468)
T ss_pred CCCcEEEEecCceeecCHHHHHHHHHHH
Confidence 246789999997664 45567776653
No 305
>KOG0780|consensus
Probab=29.64 E-value=4.9e+02 Score=27.73 Aligned_cols=41 Identities=20% Similarity=0.266 Sum_probs=26.7
Q ss_pred HHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCC
Q psy10463 214 LLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLS 257 (605)
Q Consensus 214 l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~ 257 (605)
|-+-+..+.+-..|+ +||+|-|+|.-....+...+|.....
T Consensus 201 LfeEM~~v~~ai~Pd---~vi~VmDasiGQaae~Qa~aFk~~vd 241 (483)
T KOG0780|consen 201 LFEEMKQVSKAIKPD---EIIFVMDASIGQAAEAQARAFKETVD 241 (483)
T ss_pred HHHHHHHHHhhcCCC---eEEEEEeccccHhHHHHHHHHHHhhc
Confidence 334444555555555 99999999988766666666665544
No 306
>PF07507 WavE: WavE lipopolysaccharide synthesis; InterPro: IPR011122 These proteins are encoded by putative wav gene clusters, which are responsible for the synthesis of the core oligosaccharide (OS) region of Vibrio cholerae lipopolysaccharide [].
Probab=27.77 E-value=1.3e+02 Score=30.99 Aligned_cols=35 Identities=17% Similarity=0.138 Sum_probs=26.5
Q ss_pred HHHHHHhhccCCEEEEecCCcccCcChHHHHHHHH
Q psy10463 274 ARLLGARQAEGEILVFLDAHCECTLGWLENLVARV 308 (605)
Q Consensus 274 arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~ 308 (605)
+-..|+++|+.+|++=|=+|..+..+-+-.+.+..
T Consensus 86 St~aGL~~~~~~Ya~KlRtD~~l~~~~~l~~~~~~ 120 (311)
T PF07507_consen 86 STLAGLKAAKTKYAMKLRTDNRLTGNNFLDLYEKY 120 (311)
T ss_pred HHHHHHHHhCCceEEEEcccccccchHHHHHHHHh
Confidence 34589999999999999999998655444444443
No 307
>PRK14490 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MobA; Provisional
Probab=27.76 E-value=3.5e+02 Score=28.44 Aligned_cols=82 Identities=15% Similarity=0.205 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCC-CCChHHHHHHHHhhccCCEEEEe
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG-RVGLIKARLLGARQAEGEILVFL 290 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~-n~G~~~arN~G~~~A~gd~i~fl 290 (605)
..+..+++.+.... .+|+|+-+.+.. +.+ ... .++++.... ..|...+...|++++..+.++|+
T Consensus 201 ~ll~~~l~~l~~~~-----~~vvV~~~~~~~-------~~~-~~~--~v~~i~d~~~~~Gpl~gi~~al~~~~~~~~lv~ 265 (369)
T PRK14490 201 NQLVHTAALLRPHC-----QEVFISCRAEQA-------EQY-RSF--GIPLITDSYLDIGPLGGLLSAQRHHPDAAWLVV 265 (369)
T ss_pred cHHHHHHHHHHhhC-----CEEEEEeCCchh-------hHH-hhc--CCcEEeCCCCCCCcHHHHHHHHHhCCCCcEEEE
Confidence 46666666665321 367776543321 112 122 466766543 36877788888888888888999
Q ss_pred cCCccc-CcChHHHHHHHH
Q psy10463 291 DAHCEC-TLGWLENLVARV 308 (605)
Q Consensus 291 D~D~~~-~~~~L~~ll~~~ 308 (605)
=+|+-+ +++.++.|+...
T Consensus 266 ~~DmP~i~~~~i~~L~~~~ 284 (369)
T PRK14490 266 ACDLPFLDEATLQQLVEGR 284 (369)
T ss_pred eCCcCCCCHHHHHHHHHhc
Confidence 999874 889999998864
No 308
>PF01128 IspD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; InterPro: IPR001228 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, a bacterial ispD protein, catalyzes the third step of the deoxyxylulose-5-phosphate pathway (DXP) of isoprenoid biosynthesis; the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate []. The isoprenoid pathway is a well known target for anti-infective drug development [, ].; GO: 0003824 catalytic activity, 0008299 isoprenoid biosynthetic process; PDB: 1VGW_F 1VGZ_A 1W77_A 2YC3_A 2YCM_A 2YC5_A 1VGU_A 3N9W_B 1I52_A 1H3M_B ....
Probab=27.32 E-value=5.7e+02 Score=24.75 Aligned_cols=89 Identities=13% Similarity=0.255 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhcc--CCEEEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAE--GEILVF 289 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~--gd~i~f 289 (605)
+.+..+|+.+.+...- .+||||-.....+. ++++..+ . +++++.-.. ......-.|++... .++|++
T Consensus 29 pvl~~tl~~f~~~~~i---~~Ivvv~~~~~~~~----~~~~~~~-~-~v~iv~GG~--tR~~SV~ngL~~l~~~~d~VlI 97 (221)
T PF01128_consen 29 PVLEYTLEAFLASPEI---DEIVVVVPPEDIDY----VEELLSK-K-KVKIVEGGA--TRQESVYNGLKALAEDCDIVLI 97 (221)
T ss_dssp EHHHHHHHHHHTTTTE---SEEEEEESGGGHHH----HHHHHHH-T-TEEEEE--S--SHHHHHHHHHHCHHCTSSEEEE
T ss_pred EeHHHHHHHHhcCCCC---CeEEEEecchhHHH----HHHhhcC-C-CEEEecCCh--hHHHHHHHHHHHHHcCCCEEEE
Confidence 5777888887764332 48888854443333 3444444 3 788886333 22333445555543 369999
Q ss_pred ecCCcc-cCcChHHHHHHHHHcC
Q psy10463 290 LDAHCE-CTLGWLENLVARVAED 311 (605)
Q Consensus 290 lD~D~~-~~~~~L~~ll~~~~~~ 311 (605)
-|+=-- ++++.++.+++.+.++
T Consensus 98 HDaaRPfv~~~~i~~~i~~~~~~ 120 (221)
T PF01128_consen 98 HDAARPFVSPELIDRVIEAAREG 120 (221)
T ss_dssp EETTSTT--HHHHHHHHHHHHHT
T ss_pred EccccCCCCHHHHHHHHHHHHhh
Confidence 988654 5899999999999874
No 309
>COG1207 GlmU N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane]
Probab=26.60 E-value=6.1e+02 Score=27.30 Aligned_cols=92 Identities=16% Similarity=0.169 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhc-c-CC-EEE
Q psy10463 212 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQA-E-GE-ILV 288 (605)
Q Consensus 212 ~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A-~-gd-~i~ 288 (605)
+.+...|+++..-.+. .|++|--.-.+ .+.+.....+ .+.++.+.+..|-+.|...+..+- . .+ .++
T Consensus 31 pMl~hVi~~a~~l~~~----~i~vVvGh~ae-----~V~~~~~~~~-~v~~v~Q~eqlGTgHAV~~a~~~l~~~~~g~vL 100 (460)
T COG1207 31 PMLEHVIDAARALGPD----DIVVVVGHGAE-----QVREALAERD-DVEFVLQEEQLGTGHAVLQALPALADDYDGDVL 100 (460)
T ss_pred cHHHHHHHHHhhcCcc----eEEEEEcCCHH-----HHHHHhcccc-CceEEEecccCChHHHHHhhhhhhhcCCCCcEE
Confidence 4666667766655543 45444322222 1222233222 589999999999999999887665 2 22 577
Q ss_pred EecCCcc-cCcChHHHHHHHHHcCCc
Q psy10463 289 FLDAHCE-CTLGWLENLVARVAEDRT 313 (605)
Q Consensus 289 flD~D~~-~~~~~L~~ll~~~~~~~~ 313 (605)
.|..|+. +.++.|+.|++.......
T Consensus 101 Vl~GD~PLit~~TL~~L~~~~~~~~~ 126 (460)
T COG1207 101 VLYGDVPLITAETLEELLAAHPAHGA 126 (460)
T ss_pred EEeCCcccCCHHHHHHHHHhhhhcCC
Confidence 7888886 489999988887764433
No 310
>PF02485 Branch: Core-2/I-Branching enzyme; InterPro: IPR003406 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase family 14 GT14 from CAZY, a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme (2.4.1.150 from EC) and core-2 branching enzyme (2.4.1.102 from EC). I-branching enzyme, an integral membrane protein, converts linear into branched poly-N-acetyllactosaminoglycans in the glycosylation pathway, and is responsible for the production of the blood group I-antigen during embryonic development []. Core-2 branching enzyme, also an integral membrane protein, forms crucial side-chain branches in O-glycans in the glycosylation pathway [].; GO: 0008375 acetylglucosaminyltransferase activity, 0016020 membrane; PDB: 3OTK_D 2GAM_A 2GAK_B.
Probab=25.63 E-value=4.6e+02 Score=25.43 Aligned_cols=103 Identities=13% Similarity=0.161 Sum_probs=48.8
Q ss_pred EEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCC-----CChHHHHH
Q psy10463 202 IVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGR-----VGLIKARL 276 (605)
Q Consensus 202 VIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n-----~G~~~arN 276 (605)
-+|.+|....+.+.+.+..+- .+.+ .=+|-||-.|++. ..+.+.++...++ +|+++..... .+...|--
T Consensus 3 ylil~h~~~~~~~~~l~~~l~--~~~~--~f~iHiD~k~~~~-~~~~~~~~~~~~~-nv~~v~~r~~v~WG~~S~v~A~l 76 (244)
T PF02485_consen 3 YLILAHKNDPEQLERLLRLLY--HPDN--DFYIHIDKKSPDY-FYEEIKKLISCFP-NVHFVPKRVDVRWGGFSLVEATL 76 (244)
T ss_dssp EEEEESS--HHHHHHHHHHH----TTS--EEEEEE-TTS-HH-HHHHHHHHHCT-T-TEEE-SS-----TTSHHHHHHHH
T ss_pred EEEEecCCCHHHHHHHHHHhc--CCCC--EEEEEEcCCCChH-HHHHHHHhcccCC-ceeecccccccccCCccHHHHHH
Confidence 456676644256655555544 2222 3446677776654 3334455555666 8888763322 22344444
Q ss_pred HHHhh-----ccCCEEEEecCCcccCcChHHHHHHHHHcC
Q psy10463 277 LGARQ-----AEGEILVFLDAHCECTLGWLENLVARVAED 311 (605)
Q Consensus 277 ~G~~~-----A~gd~i~flD~D~~~~~~~L~~ll~~~~~~ 311 (605)
.+++. ..-+|+++|..+|.+-..- +.+.+.++.+
T Consensus 77 ~ll~~al~~~~~~~y~~llSg~D~Pl~s~-~~i~~~l~~~ 115 (244)
T PF02485_consen 77 NLLREALKRDGDWDYFILLSGQDYPLKSN-EEIHEFLESN 115 (244)
T ss_dssp HHHHHHHHH-S---EEEEEETTEEESS-H-HHHHHHHHHT
T ss_pred HHHHHHHhcCCCCcEEEEcccccccccch-HHHHHHHHhc
Confidence 44333 3668999999988763322 4555555554
No 311
>PF11397 GlcNAc: Glycosyltransferase (GlcNAc); InterPro: IPR021067 GlcNAc is an enzyme that carries out the first glycosylation step of hydroxylated Skp1; it is found in the cytoplasm and results in a pentasaccharide-linked 'HyPro-143[, ].
Probab=25.59 E-value=3.5e+02 Score=28.24 Aligned_cols=44 Identities=25% Similarity=0.311 Sum_probs=35.2
Q ss_pred CCeEEeec--CCCcchHHHHHHHhhhccC-ceEEEecCccccccccc
Q psy10463 150 VPTRVIRS--PGRVGLIKARLLGARQAEG-EILVFLDAHCECTLVFN 193 (605)
Q Consensus 150 ~~v~~~~~--~~~~G~~~a~n~g~~~a~g-~~i~~lD~d~~~~~~~~ 193 (605)
..|++++. ..-.|-..||..+..+=+| +|.+-+||+....++|.
T Consensus 88 ~~Ir~~~~~~~~a~Gp~~AR~la~~l~~gE~y~LqiDSH~rF~~~WD 134 (343)
T PF11397_consen 88 DQIRVIRVDASEARGPCWARYLAQKLYRGEDYYLQIDSHMRFVPGWD 134 (343)
T ss_pred CeEEEEEeCHHHCcChHHHHHHHHHHhCCCeEEEEEeccceeeccHH
Confidence 34666554 4557889999999888875 68999999999999996
No 312
>cd02509 GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransferase catalyzes the formation of GDP-Mannose. GDP-mannose-1-phosphate guanylyltransferase, also called GDP-mannose pyrophosphorylase (GDP-MP), catalyzes the formation of GDP-Mannose from mannose-1-phosphate and GTP. Mannose is a key monosaccharide for glycosylation of proteins and lipids. GDP-Mannose is the activated donor for mannosylation of various biomolecules. This enzyme is known to be bifunctional, as both mannose-6-phosphate isomerase and mannose-1-phosphate guanylyltransferase. This CD covers the N-terminal GDP-mannose-1-phosphate guanylyltransferase domain, whereas the isomerase function is located at the C-terminal half. GDP-MP is a member of the nucleotidyltransferase family of enzymes.
Probab=24.85 E-value=3.9e+02 Score=26.71 Aligned_cols=85 Identities=19% Similarity=0.191 Sum_probs=53.1
Q ss_pred EEEeecCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhhhc
Q psy10463 95 VIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQA 174 (605)
Q Consensus 95 iip~yN~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~~a 174 (605)
.+|..+.. ..|..+|+.+...... .+|+||-.-... ..+++++......+.++..+...|-+.|...++...
T Consensus 26 ll~l~g~~-~li~~~l~~l~~~~~~---~~i~vvt~~~~~----~~v~~~l~~~~~~~~ii~ep~~~gTa~ai~~a~~~~ 97 (274)
T cd02509 26 FLKLFGDK-SLLQQTLDRLKGLVPP---DRILVVTNEEYR----FLVREQLPEGLPEENIILEPEGRNTAPAIALAALYL 97 (274)
T ss_pred EeEcCCCC-cHHHHHHHHHhcCCCC---CcEEEEechHHH----HHHHHHHhhcCCCceEEECCCCCCcHHHHHHHHHHH
Confidence 35555544 7888888887765322 377777653221 224444444334577887777788888877776654
Q ss_pred c----CceEEEecCccc
Q psy10463 175 E----GEILVFLDAHCE 187 (605)
Q Consensus 175 ~----g~~i~~lD~d~~ 187 (605)
. .++++++.+|..
T Consensus 98 ~~~~~~~~vlVl~~D~~ 114 (274)
T cd02509 98 AKRDPDAVLLVLPSDHL 114 (274)
T ss_pred HhcCCCCeEEEecchhc
Confidence 3 467777777753
No 313
>KOG2287|consensus
Probab=24.38 E-value=8.3e+02 Score=25.50 Aligned_cols=151 Identities=11% Similarity=0.043 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHCCCCEEEEeCCCCCC-----hHHHHHHHHhhc-cCCEEEEecCCcccCcChHHHHHHHHH-cCCcEEEe
Q psy10463 245 LKSSLDEYVAKLSVPTRVIRSPGRVG-----LIKARLLGARQA-EGEILVFLDAHCECTLGWLENLVARVA-EDRTRVVC 317 (605)
Q Consensus 245 ~~~~l~~~~~~~~~~v~~i~~~~n~G-----~~~arN~G~~~A-~gd~i~flD~D~~~~~~~L~~ll~~~~-~~~~~vv~ 317 (605)
+...+.+-.+.++ .|-+..-..+.. ......-|...+ ..+||+-.|+|+.+.++-|-+++.... ..+....|
T Consensus 144 ~~~~l~~Ea~~yg-DIi~~df~Dty~nltlKtl~~l~w~~~~cp~akfi~K~DDDvfv~~~~L~~~L~~~~~~~~~~~~G 222 (349)
T KOG2287|consen 144 LNKLLADEARLYG-DIIQVDFEDTYFNLTLKTLAILLWGVSKCPDAKFILKIDDDVFVNPDNLLEYLDKLNDPSSDLYYG 222 (349)
T ss_pred HHHHHHHHHHHhC-CEEEEecccchhchHHHHHHHHHHHHhcCCcceEEEeccCceEEcHHHHHHHHhccCCCCcceEEE
Confidence 3445555566666 554444333222 133344555544 589999999999999887777766652 22334443
Q ss_pred eeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhhhccCCCCccccccccceEEEEeHHHHhHhCCCCccccc
Q psy10463 318 PVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKDFTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQV 397 (605)
Q Consensus 318 p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~ 397 (605)
-++.. .... +. -..+| .++..++. .+.--|.++|+.+++++++...+-.--.....
T Consensus 223 ~v~~~----------~~p~-R~-----~~~Kw-yVp~~~y~-------~~~YP~Y~sG~gYvis~~~a~~l~~~s~~~~~ 278 (349)
T KOG2287|consen 223 RVIQN----------APPI-RD-----KTSKW-YVPESEYP-------CSVYPPYASGPGYVISGDAARRLLKASKHLKF 278 (349)
T ss_pred eeccc----------CCCC-CC-----CCCCC-ccCHHHCC-------CCCCCCcCCCceeEecHHHHHHHHHHhcCCCc
Confidence 22210 0000 00 00111 12222111 11223567889999999999988654444444
Q ss_pred ccchhhHHHHHHHHc-CCeEEEec
Q psy10463 398 WGGENLEMSFRVWQC-GGSIEIAP 420 (605)
Q Consensus 398 ~g~ED~dl~~Rl~~~-G~~i~~~p 420 (605)
+-.||+-+..=+.+. |.+-.-.+
T Consensus 279 ~~iEDV~~g~~l~~~~gi~~~~~~ 302 (349)
T KOG2287|consen 279 FPIEDVFVGGCLAEDLGIKPVNHP 302 (349)
T ss_pred cchHHHHHHHHHHHhcCCCcccCc
Confidence 457999888777766 65544333
No 314
>KOG2791|consensus
Probab=24.27 E-value=6e+02 Score=26.31 Aligned_cols=118 Identities=12% Similarity=0.083 Sum_probs=61.8
Q ss_pred CCEEEEecCCcccCcChHHHHHHHHHcCCcEEEeeeEeeecCCeeEEecccccceeeeeccceeeEeecCchhHhhhccC
Q psy10463 284 GEILVFLDAHCECTLGWLENLVARVAEDRTRVVCPVIDIISDVTFAYVRSFELHWGAFNWELHFRWYTYGSSDAIIKRKD 363 (605)
Q Consensus 284 gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~p~i~~i~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~ 363 (605)
...|+||.-|-.+.||++..+-......+.. ||-.+.++-.+.. .. .++|-+-.+
T Consensus 253 ~g~iLflEEDH~LaPdayhv~~~l~~lkp~~--Cp~C~~~sLg~y~-s~----sryGqD~~~------------------ 307 (455)
T KOG2791|consen 253 EGHILFLEEDHFLAPDAYHVIQTLTRLKPAK--CPDCFAASLGPYD-SK----SRYGQDEGL------------------ 307 (455)
T ss_pred CceEEEEecccccChhHHHHHHHHHhcCccc--CCcceeeeccccc-cc----ccccccccc------------------
Confidence 3689999999999999987765554443321 2222211111110 00 011111000
Q ss_pred CCCccccccccceEEEEeHHHHhHhCCCCcccccccchhhHHHHHHH--H---cCCeEEEecceEEEEEc
Q psy10463 364 FTEPFKTPAMAGGLFAIDRAYFFHIGAYDEEMQVWGGENLEMSFRVW--Q---CGGSIEIAPCSHVAHLF 428 (605)
Q Consensus 364 ~~~~~~~~~~~G~~~~i~r~~f~~iGgfDe~~~~~g~ED~dl~~Rl~--~---~G~~i~~~p~s~v~H~~ 428 (605)
..++. ..+..-.+++.|.+|++|-+--+.|-.|..-++|+++-.. . .-+++..-|..++.|..
T Consensus 308 -v~~w~-s~~hNmG~al~rn~wqki~~c~~~FC~~DDYNWDwtl~~~~~~clp~~~~vl~~~~pr~~H~G 375 (455)
T KOG2791|consen 308 -VSLWA-SRMHNMGYALNRNVWQKIHQCAREFCFFDDYNWDWTLWATVFPCLPSPVYVLRGPRPRAVHFG 375 (455)
T ss_pred -eeehh-hhcccchhhhhHHHHHHHHHhHHhhcccccCCcceeehhhhccccCcceEEeecCCCceEEec
Confidence 00111 1222335689999999998877766655444455443321 1 23445566777888774
No 315
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=23.49 E-value=6.2e+02 Score=24.60 Aligned_cols=86 Identities=13% Similarity=0.154 Sum_probs=51.2
Q ss_pred cCchHHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCC--Ccc----------hHHHH
Q psy10463 100 NEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG--RVG----------LIKAR 167 (605)
Q Consensus 100 N~~~~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~--~~G----------~~~a~ 167 (605)
|.. ..+.-++.|++..+... ..+.|+.|+-+++. ++.+.+.....+..+.++.... ... ..-+|
T Consensus 11 ~y~-~~~~v~i~Sl~~~~~~~--~~~~il~~~is~~~-~~~L~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~y~R 86 (246)
T cd00505 11 EYL-RGAIVLMKSVLRHRTKP--LRFHVLTNPLSDTF-KAALDNLRKLYNFNYELIPVDILDSVDSEHLKRPIKIVTLTK 86 (246)
T ss_pred chh-HHHHHHHHHHHHhCCCC--eEEEEEEccccHHH-HHHHHHHHhccCceEEEEeccccCcchhhhhcCccccceeHH
Confidence 444 88999999999887653 68888888866654 3445555443333455444321 110 01133
Q ss_pred HHHhhhcc-CceEEEecCccccc
Q psy10463 168 LLGARQAE-GEILVFLDAHCECT 189 (605)
Q Consensus 168 n~g~~~a~-g~~i~~lD~d~~~~ 189 (605)
....+.-. -+-+++||+|..+.
T Consensus 87 L~i~~llp~~~kvlYLD~D~iv~ 109 (246)
T cd00505 87 LHLPNLVPDYDKILYVDADILVL 109 (246)
T ss_pred HHHHHHhhccCeEEEEcCCeeec
Confidence 33333333 77889999998553
No 316
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=23.05 E-value=3.1e+02 Score=29.06 Aligned_cols=68 Identities=22% Similarity=0.254 Sum_probs=36.1
Q ss_pred cCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCCCCEEEEeCCCCCCh
Q psy10463 196 FLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGL 271 (605)
Q Consensus 196 ~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~~~v~~i~~~~n~G~ 271 (605)
..|.+.+|..+|||--..+..-|..|.+-.... ..++|||-=|+-+-..-.++++ .|.++-...+.++
T Consensus 128 ~~~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~--g~l~iVDaVsS~Gg~~~~vd~w------giDv~itgSQK~l 195 (383)
T COG0075 128 KDPDIKAVAVVHNETSTGVLNPLKEIAKAAKEH--GALLIVDAVSSLGGEPLKVDEW------GIDVAITGSQKAL 195 (383)
T ss_pred cCCCccEEEEEeccCcccccCcHHHHHHHHHHc--CCEEEEEecccCCCcccchhhc------CccEEEecCchhc
Confidence 357788899999987223333344333322111 3778888777644222123332 4655555554444
No 317
>PF03028 Dynein_heavy: Dynein heavy chain and region D6 of dynein motor; InterPro: IPR004273 Dynein is a multisubunit microtubule-dependent motor enzyme that acts as the force generating protein of eukaryotic cilia and flagella. The cytoplasmic isoform of dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. Dynein is composed of a number of ATP-binding large subunits, intermediate size subunits and small subunits (see IPR001372 from INTERPRO). This family represents the C-terminal region of dynein heavy chain. The dynein heavy chain also exhibits ATPase activity and microtubule binding ability and acts as a motor for the movement of organelles and vesicles along microtubules. ; GO: 0003777 microtubule motor activity, 0007018 microtubule-based movement, 0030286 dynein complex; PDB: 3VKG_A 3VKH_C 4AKI_A 4AI6_B 4AKH_A 4AKG_A 3QMZ_A.
Probab=22.72 E-value=2.3e+02 Score=32.78 Aligned_cols=85 Identities=16% Similarity=0.277 Sum_probs=49.8
Q ss_pred HHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHHHHCC---CCEEEEeCCCCCChHHHHHHHHh--hccCCEEEEecC
Q psy10463 218 VHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLS---VPTRVIRSPGRVGLIKARLLGAR--QAEGEILVFLDA 292 (605)
Q Consensus 218 l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~~~~~---~~v~~i~~~~n~G~~~arN~G~~--~A~gd~i~flD~ 292 (605)
+.+++..+.+. ..||++-....|++. .+++++++.. .+++.|..+...|. .|. ..++ ...|.||++=|.
T Consensus 106 l~~~~~~s~~~--~Pil~~~s~g~Dp~~--~i~~lA~~~~~~~~~~~~islG~~~~~-~a~-~~l~~a~~~G~Wv~L~N~ 179 (707)
T PF03028_consen 106 LESIYEESSPT--TPILFILSPGSDPSS--EIEQLAKKKGFGNKKLQSISLGSGQGP-EAE-KALKEAAKEGHWVLLQNC 179 (707)
T ss_dssp HHHHHHCTTTT--C-EEEEE-TT--THH--HHHHHHHCTT-----EEEEETTSHHHH-HHH-HHHHHHHHHTSEEEEETG
T ss_pred HHHHHHhcCCC--CceEEEeCCCCChHH--HHHHHHHHHhhhhhheeecCCCCchHH-HHH-HHHHHHhcCCeEEEcccc
Confidence 55566555444 355555444445432 3677777765 56788887665555 332 2333 348999999988
Q ss_pred CcccCcChHHHHHHHHHc
Q psy10463 293 HCECTLGWLENLVARVAE 310 (605)
Q Consensus 293 D~~~~~~~L~~ll~~~~~ 310 (605)
|.. +.||..|-+.+..
T Consensus 180 HL~--~~wl~~Le~~l~~ 195 (707)
T PF03028_consen 180 HLA--PSWLPQLEKKLES 195 (707)
T ss_dssp GGG--CCCHHCHHHHHHC
T ss_pred hhH--HHHHHHHHHHHhc
Confidence 855 6898887777654
No 318
>PF09886 DUF2113: Uncharacterized protein conserved in archaea (DUF2113); InterPro: IPR016762 There is currently no experimental data for members of this group or their homologues. Based on distant sequence similarity, they may be tentatively predicted to be nucleic acid-binding proteins, they are also likely to be linked to methanogenesis or a process closely connected to it.
Probab=22.48 E-value=2.6e+02 Score=26.44 Aligned_cols=49 Identities=20% Similarity=0.243 Sum_probs=34.4
Q ss_pred HHHHHHHHHCCCCEEEEeCCCCCChHHHHHHHHhhccCCEEEEecCCcccCcChHHHHHHHHHc
Q psy10463 247 SSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAEGEILVFLDAHCECTLGWLENLVARVAE 310 (605)
Q Consensus 247 ~~l~~~~~~~~~~v~~i~~~~n~G~~~arN~G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~ 310 (605)
.++.....-.|...|+.++. ..|+-++|+-++..+.+.|++...+.+.+
T Consensus 136 ~v~da~~RI~PEGFRVr~~~---------------~~~~~f~~vASE~~i~~ewi~~a~e~~~e 184 (188)
T PF09886_consen 136 KVYDAMFRIAPEGFRVRRHY---------------YEGNSFAFVASEETIKDEWIEEAKEMIEE 184 (188)
T ss_pred HHHHHHHHhCCCccEEeecc---------------ccCCeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 34444455566556665532 36788999999999999999887776543
No 319
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=22.26 E-value=2.3e+02 Score=27.25 Aligned_cols=84 Identities=15% Similarity=0.132 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCC---------------CcchHHHHH
Q psy10463 104 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPG---------------RVGLIKARL 168 (605)
Q Consensus 104 ~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~---------------~~G~~~a~n 168 (605)
..+..++.|++..+.......+++++|+.+++..+. +.+..........+..... .....-+|-
T Consensus 12 ~~~~v~i~Sl~~~~~~~~~~~i~i~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl 90 (250)
T PF01501_consen 12 EGAAVLIKSLLKNNPDPSNLHIYIITDDISEEDFEK-LRALAAEVIEIEPIEFPDISMLEEFQFNSPSKRHFSPATFARL 90 (250)
T ss_dssp HHHHHHHHHHHHTTTT-SSEEEEEEESSS-HHHHHH-HHHHSCCCCTTECEEETSGGHHH--TTS-HCCTCGGGGGGGGG
T ss_pred HHHHHHHHHHHHhccccccceEEEecCCCCHHHHHH-HhhhcccccceeeeccchHHhhhhhhhcccccccccHHHHHHh
Confidence 778889999999887533368898988887766333 3333222222111211110 011233444
Q ss_pred HHhhh-ccCceEEEecCcccc
Q psy10463 169 LGARQ-AEGEILVFLDAHCEC 188 (605)
Q Consensus 169 ~g~~~-a~g~~i~~lD~d~~~ 188 (605)
...+. ...+-+++||+|.-+
T Consensus 91 ~i~~ll~~~drilyLD~D~lv 111 (250)
T PF01501_consen 91 FIPDLLPDYDRILYLDADTLV 111 (250)
T ss_dssp GHHHHSTTSSEEEEE-TTEEE
T ss_pred hhHHHHhhcCeEEEEcCCeee
Confidence 55555 678999999999855
No 320
>KOG2264|consensus
Probab=22.21 E-value=96 Score=33.95 Aligned_cols=108 Identities=18% Similarity=0.212 Sum_probs=68.3
Q ss_pred cceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHHH-HHCCCCEEEEeCCCCCChHHHHHH
Q psy10463 199 KSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYV-AKLSVPTRVIRSPGRVGLIKARLL 277 (605)
Q Consensus 199 ~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~~-~~~~~~v~~i~~~~n~G~~~arN~ 277 (605)
.++||+.||.++ ..|...|..+-.-.+- ..||||=|...++ .+++. -..+.+|.+++.++|.= ..|-.
T Consensus 650 QFTvVmLTYERe-~VLm~sLeRL~gLPYL---nKvvVVWNspk~P-----~ddl~WPdigvPv~viR~~~NsL--NNRFl 718 (907)
T KOG2264|consen 650 QFTVVMLTYERE-AVLMGSLERLHGLPYL---NKVVVVWNSPKDP-----PDDLTWPDIGVPVEVIRVAENSL--NNRFL 718 (907)
T ss_pred eEEEEEEEehHH-HHHHHHHHHhhCCccc---ceEEEEeCCCCCC-----hhcccCcCCCCceEEEEcccccc--ccccc
Confidence 489999999999 8888888776544433 5889998876654 12221 12345788998877521 11112
Q ss_pred HHhhccCCEEEEecCCcccCcChHHHHHHHHHcCCcEEEe
Q psy10463 278 GARQAEGEILVFLDAHCECTLGWLENLVARVAEDRTRVVC 317 (605)
Q Consensus 278 G~~~A~gd~i~flD~D~~~~~~~L~~ll~~~~~~~~~vv~ 317 (605)
-...-..+-|+-+|+|.-+..+-+---.....++.+.+|+
T Consensus 719 Pwd~IETEAvLS~DDDahLrhdEI~fgFRVWRE~RDRiVG 758 (907)
T KOG2264|consen 719 PWDRIETEAVLSLDDDAHLRHDEIIFGFRVWRENRDRIVG 758 (907)
T ss_pred Cchhhhheeeeecccchhhhhhheeeeeehhhhccccccc
Confidence 2344567889999999776555443333445666666555
No 321
>PF04123 DUF373: Domain of unknown function (DUF373); InterPro: IPR007254 This archaeal family of unknown function is predicted to be an integral membrane protein with six transmembrane regions.
Probab=21.52 E-value=1.1e+02 Score=31.95 Aligned_cols=38 Identities=13% Similarity=0.226 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHH
Q psy10463 104 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEY 144 (605)
Q Consensus 104 ~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~ 144 (605)
..+.+.|+.++.+..++ .+|+|-||..|+.+-.+++..
T Consensus 84 ~~I~~qld~vl~~~~~~---~~i~VsDGaeDE~vlPiIqSr 121 (344)
T PF04123_consen 84 RKIAEQLDEVLSKFDPD---SAIVVSDGAEDERVLPIIQSR 121 (344)
T ss_pred HHHHHHHHHHHHhCCCC---EEEEEecChhhhhhhHhhhcc
Confidence 67899999999999877 999999999999866655543
No 322
>PF09807 DUF2348: Uncharacterized conserved protein (DUF2348); InterPro: IPR018627 Members of this family of putative uncharacterised proteins have no known function.
Probab=21.45 E-value=7.3e+02 Score=24.52 Aligned_cols=128 Identities=22% Similarity=0.357 Sum_probs=64.0
Q ss_pred HHHHHhcCCccCc-ceEEEEeCCCchhh--HHHHHHHHHHhcCCCeEEeecCCCcchHHH--HHHHhhhc----cCceEE
Q psy10463 110 VHSVISRSPRSML-KEILLVDDASTREF--LKSSLDEYVAKLSVPTRVIRSPGRVGLIKA--RLLGARQA----EGEILV 180 (605)
Q Consensus 110 l~sv~~~~~~~~~-~EiivvdD~S~d~~--~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a--~n~g~~~a----~g~~i~ 180 (605)
|.++++-++.... -++|+|-|..+|++ +-..+..+++ .+.+|.++...+..+...+ +-.|...+ +|. +.
T Consensus 5 ln~ll~~~~~~~~~g~~ili~d~~~dgsFLlh~~L~~~Lk-~~~~V~fv~~~q~~~HY~~v~~KLG~NL~~~~~~gq-l~ 82 (249)
T PF09807_consen 5 LNSLLNWSPDSVPPGKLILIEDCETDGSFLLHHFLSQYLK-AGCKVCFVAFSQSFSHYNNVAQKLGVNLSAAKEKGQ-LV 82 (249)
T ss_pred HHHHhcCCCCCCCCCeEEEEEcCCCCchhHHHHHHHHHhc-CCCcEEEEEccCCHHHHHHHHHhhEecchHhccCCc-EE
Confidence 4455554433221 37888888888887 4555666666 3345777777766666443 34444443 344 44
Q ss_pred EecCccc-ccccccc--ccCCc-ceEEEEeec-hhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCC
Q psy10463 181 FLDAHCE-CTLVFNE--EFLPK-SSIVIVFHN-EAWSALLRTVHSVISRSPRSMLKEILLVDDAST 241 (605)
Q Consensus 181 ~lD~d~~-~~~~~~~--~~~p~-vSVIIp~~n-~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~ 241 (605)
|+|.=.. +...+.+ ...|. ...+. .-+ .....|.++|...+....... .-+|||||=|.
T Consensus 83 fiD~l~~~~~~l~~~~~~~~~~~~~~l~-~~~~~~L~~L~~~I~~~l~~~~~~~-~~~liIDdls~ 146 (249)
T PF09807_consen 83 FIDGLKSSLDLLFDEDSSDEPNPLKFLR-EDNASSLRSLYEFIQEALSPADSNG-SVVLIIDDLSV 146 (249)
T ss_pred EeehhhhhhhhhhccccccCCccccccc-cCCcchHHHHHHHHHHHHhhccCCC-CeEEEEeCHHH
Confidence 4454331 1100110 00111 01110 011 112567777877777643332 47888888653
No 323
>TIGR02091 glgC glucose-1-phosphate adenylyltransferase. This enzyme, glucose-1-phosphate adenylyltransferase, is also called ADP-glucose pyrophosphorylase. The plant form is an alpha2,beta2 heterodimer, allosterically regulated in plants. Both subunits are homologous and included in this model. In bacteria, both homomeric forms of GlgC and more active heterodimers of GlgC and GlgD have been described. This model describes the GlgC subunit only. This enzyme appears in variants of glycogen synthesis pathways that use ADP-glucose, rather than UDP-glucose as in animals.
Probab=21.31 E-value=5e+02 Score=26.90 Aligned_cols=43 Identities=16% Similarity=0.152 Sum_probs=30.2
Q ss_pred CChHHHHHHHHhhcc---CCEEEEecCCcccCcChHHHHHHHHHcCC
Q psy10463 269 VGLIKARLLGARQAE---GEILVFLDAHCECTLGWLENLVARVAEDR 312 (605)
Q Consensus 269 ~G~~~arN~G~~~A~---gd~i~flD~D~~~~~~~L~~ll~~~~~~~ 312 (605)
.|.+.+.-.++.... .+.++++.+|...+.+ +..+++......
T Consensus 93 ~Gt~~al~~a~~~~~~~~~~~~lv~~gD~l~~~~-l~~~l~~~~~~~ 138 (361)
T TIGR02091 93 QGTADAVYQNLDLIEDYDPEYVLILSGDHIYKMD-YEKMLDYHIESG 138 (361)
T ss_pred cCcHHHHHHHHHHHHhcCCCEEEEecCCEEEcCC-HHHHHHHHHHcC
Confidence 677777766766553 5778899999977665 667777665443
No 324
>TIGR03552 F420_cofC 2-phospho-L-lactate guanylyltransferase CofC. Members of this protein family are the CofC enzyme of coenzyme F420 biosynthesis.
Probab=20.63 E-value=6e+02 Score=23.49 Aligned_cols=70 Identities=24% Similarity=0.282 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHhcCCccCcceEEEEeCCCchhhHHHHHHHHHHhcCCCeEEeecCCCcchHHHHHHHhhhcc--CceEEE
Q psy10463 104 SALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEYVAKLSVPTRVIRSPGRVGLIKARLLGARQAE--GEILVF 181 (605)
Q Consensus 104 ~~l~~~l~sv~~~~~~~~~~EiivvdD~S~d~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~a~n~g~~~a~--g~~i~~ 181 (605)
..|..+++.+.... ..+++||.+. +. +.++.... .+.++.++. .|.+.+...|++.+. ++.+++
T Consensus 31 ~ll~~~l~~l~~~~----~~~vvvv~~~---~~----~~~~~~~~--~v~~i~~~~-~G~~~si~~al~~~~~~~~~vlv 96 (195)
T TIGR03552 31 AMLRDVITALRGAG----AGAVLVVSPD---PA----LLEAARNL--GAPVLRDPG-PGLNNALNAALAEAREPGGAVLI 96 (195)
T ss_pred HHHHHHHHHHHhcC----CCCEEEECCC---HH----HHHHHHhc--CCEEEecCC-CCHHHHHHHHHHHhhccCCeEEE
Confidence 44555555554432 1367777652 21 12222222 467776655 499999999988753 457888
Q ss_pred ecCccc
Q psy10463 182 LDAHCE 187 (605)
Q Consensus 182 lD~d~~ 187 (605)
+-+|..
T Consensus 97 ~~~D~P 102 (195)
T TIGR03552 97 LMADLP 102 (195)
T ss_pred EeCCCC
Confidence 888873
No 325
>PF01793 Glyco_transf_15: Glycolipid 2-alpha-mannosyltransferase; InterPro: IPR002685 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This entry represents a family of fungi mannosyl-transferases involved in N-linked and O-linked glycosylation of proteins. They belong to the glycosyltransferase family 15 (GT15 from CAZY). Some of the enzymes in this family have been shown to be involved in O- and N-linked glycan modifications in the Golgi [].; GO: 0000030 mannosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 1S4P_A 1S4O_A 1S4N_A.
Probab=20.31 E-value=3e+02 Score=28.47 Aligned_cols=57 Identities=16% Similarity=0.242 Sum_probs=35.9
Q ss_pred cCCcceEEEEeechhhHHHHHHHHHHHhcCCCCCceeEEEeeCCCChHHHHHHHHHH
Q psy10463 196 FLPKSSIVIVFHNEAWSALLRTVHSVISRSPRSMLKEILLVDDASTREFLKSSLDEY 252 (605)
Q Consensus 196 ~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eIIvVDd~S~d~~~~~~l~~~ 252 (605)
..++.++|+.++|+....++++|+++-.+-.....+..|++.|..=.+..+..+.+.
T Consensus 53 ~r~~Aafv~LvrN~dL~~~l~SI~~lE~rFN~kf~YpwvFlnd~pFteeFk~~i~~~ 109 (328)
T PF01793_consen 53 PRENAAFVMLVRNSDLEGLLSSIRSLEDRFNKKFNYPWVFLNDEPFTEEFKEAISNA 109 (328)
T ss_dssp S---EEEEEE--GGGHHHHHHHHHHHHHHTTTTS---EEEEESS---HHHHHHHHHH
T ss_pred CCCceEEEEEEEchhHHHHHHHHHHHHHHccCCCCCCEEEEeCCCCCHHHHHHHHHh
Confidence 367889999999999889999999998887666668999998876554444444443
No 326
>PLN03180 reversibly glycosylated polypeptide; Provisional
Probab=20.27 E-value=2e+02 Score=29.69 Aligned_cols=29 Identities=14% Similarity=0.158 Sum_probs=24.9
Q ss_pred HHHHHHHhhhccCceEEEecCcccccccc
Q psy10463 164 IKARLLGARQAEGEILVFLDAHCECTLVF 192 (605)
Q Consensus 164 ~~a~n~g~~~a~g~~i~~lD~d~~~~~~~ 192 (605)
.+.|+.|.-.++.+|++++|.||-+..+|
T Consensus 82 ~a~R~fGyL~s~~~yivsiDDD~~Pa~d~ 110 (346)
T PLN03180 82 SACRCFGYLVSKKKYIFTIDDDCFVAKDP 110 (346)
T ss_pred ccchhhhheeecceEEEEECCCCCCCCCC
Confidence 45689999999999999999999877655
Done!