Your job contains 1 sequence.
>psy10465
MRHANKLSHQDLEQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQAL
LFLHLGRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTV
AQVLRKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRASSNPQWQPLVLVIPLRLGI
QDINPVYINGIKKCYALPISPVYDMVKILSSTYNMQTPRYEFTFPQSLGVIGGKPNHALY
FIGYVGNDVIFLDPHTNQNIGCVYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVVSQ
RSYSDYKNV
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10465
(309 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0031298 - symbol:Atg4 "Autophagy-specific gene 4" ... 619 3.6e-80 2
UNIPROTKB|Q5ZIW7 - symbol:ATG4A "Cysteine protease ATG4A"... 496 8.1e-79 3
ZFIN|ZDB-GENE-040917-3 - symbol:atg4b "ATG4 autophagy rel... 489 8.0e-77 3
RGD|1596915 - symbol:Atg4al1 "autophagy related 4A, cyste... 470 1.6e-76 3
UNIPROTKB|Q6PZ05 - symbol:ATG4A "Cysteine protease ATG4A"... 659 1.1e-64 1
UNIPROTKB|A6QLH1 - symbol:ATG4A "ATG4 autophagy related 4... 658 1.4e-64 1
UNIPROTKB|Q9Y4P1 - symbol:ATG4B "Cysteine protease ATG4B"... 489 1.4e-64 2
MGI|MGI:1913865 - symbol:Atg4b "autophagy related 4B, cys... 486 1.4e-64 2
UNIPROTKB|F1NW36 - symbol:ATG4B "Cysteine protease ATG4B"... 657 1.8e-64 1
UNIPROTKB|Q6PZ02 - symbol:ATG4B "Cysteine protease ATG4B"... 657 1.8e-64 1
UNIPROTKB|F1MJZ9 - symbol:ATG4B "Cysteine protease ATG4B"... 479 1.3e-63 2
UNIPROTKB|Q6PZ03 - symbol:ATG4B "Cysteine protease ATG4B"... 479 1.3e-63 2
UNIPROTKB|F1LRG2 - symbol:Atg4b "Protein Atg4b" species:1... 481 1.6e-63 2
UNIPROTKB|Q8WYN0 - symbol:ATG4A "Cysteine protease ATG4A"... 637 2.3e-62 1
UNIPROTKB|E2RLY1 - symbol:ATG4A "Uncharacterized protein"... 627 2.7e-61 1
ZFIN|ZDB-GENE-050522-430 - symbol:atg4a "ATG4 autophagy r... 588 3.6e-57 1
UNIPROTKB|F5H7P2 - symbol:ATG4B "Cysteine protease ATG4B"... 416 6.9e-57 2
UNIPROTKB|H7BYM2 - symbol:ATG4A "Cysteine protease ATG4A"... 577 5.3e-56 1
UNIPROTKB|F1RXI5 - symbol:LOC100156732 "Uncharacterized p... 561 2.6e-54 1
WB|WBGene00013595 - symbol:atg-4.1 species:6239 "Caenorha... 545 1.3e-52 1
UNIPROTKB|Q9NA30 - symbol:atg-4.1 "Protein ATG-4.1, isofo... 545 1.3e-52 1
UNIPROTKB|F8WD71 - symbol:ATG4B "Cysteine protease ATG4B"... 364 2.0e-51 2
UNIPROTKB|F1PAF7 - symbol:ATG4B "Uncharacterized protein"... 354 2.3e-50 2
UNIPROTKB|K7GK67 - symbol:LOC100156732 "Uncharacterized p... 436 1.1e-46 2
UNIPROTKB|C9JQ72 - symbol:ATG4B "Cysteine protease ATG4B"... 472 7.1e-45 1
UNIPROTKB|F5H3G3 - symbol:ATG4A "Cysteine protease ATG4A"... 355 1.8e-42 2
DICTYBASE|DDB_G0283753 - symbol:DDB_G0283753 species:4468... 305 3.7e-41 2
UNIPROTKB|Q86TL0 - symbol:ATG4D "Cysteine protease ATG4D"... 200 5.3e-41 3
MGI|MGI:2444308 - symbol:Atg4d "autophagy related 4D, cys... 203 7.4e-41 3
UNIPROTKB|F1S3M2 - symbol:ATG4D "Cysteine protease ATG4D"... 199 7.6e-41 3
UNIPROTKB|Q684M2 - symbol:ATG4D "Cysteine protease ATG4D"... 199 7.6e-41 3
UNIPROTKB|F1N5L1 - symbol:ATG4D "Uncharacterized protein"... 201 9.6e-41 3
UNIPROTKB|E2RDP2 - symbol:ATG4D "Uncharacterized protein"... 198 1.1e-40 3
UNIPROTKB|K7GPU1 - symbol:LOC100156732 "Uncharacterized p... 430 2.0e-40 1
TAIR|locus:2080447 - symbol:AT3G59950 species:3702 "Arabi... 405 8.9e-38 1
UNIPROTKB|F1LX10 - symbol:F1LX10 "Uncharacterized protein... 400 3.0e-37 1
ASPGD|ASPL0000035892 - symbol:AN3470 species:162425 "Emer... 283 1.3e-36 2
UNIPROTKB|Q523C3 - symbol:ATG4 "Cysteine protease ATG4" s... 255 4.7e-36 3
UNIPROTKB|C9JIK8 - symbol:ATG4B "Cysteine protease ATG4B"... 287 1.5e-35 2
UNIPROTKB|K7GM02 - symbol:LOC100156732 "Uncharacterized p... 202 1.8e-35 3
UNIPROTKB|F1P1T4 - symbol:F1P1T4 "Uncharacterized protein... 290 1.0e-34 2
UNIPROTKB|Q2XPP4 - symbol:ATG4B "Cysteine protease ATG4B"... 258 1.7e-34 2
TAIR|locus:2051754 - symbol:AT2G44140 "AT2G44140" species... 372 2.8e-34 1
MGI|MGI:2651854 - symbol:Atg4c "autophagy related 4C, cys... 186 4.1e-34 3
FB|FBgn0038325 - symbol:CG6194 species:7227 "Drosophila m... 275 4.2e-34 2
UNIPROTKB|C9J3C0 - symbol:ATG4B "Cysteine protease ATG4B"... 364 2.0e-33 1
UNIPROTKB|G5E979 - symbol:ATG4A "ATG4 autophagy related 4... 274 6.2e-33 2
UNIPROTKB|E1BS34 - symbol:ATG4C "Uncharacterized protein"... 186 9.4e-33 3
UNIPROTKB|C9JVD5 - symbol:ATG4B "Cysteine protease ATG4B"... 342 4.2e-31 1
ZFIN|ZDB-GENE-040625-84 - symbol:atg4c "autophagy-related... 197 1.4e-29 2
UNIPROTKB|K7EJA5 - symbol:ATG4D "Cysteine protease ATG4D"... 171 1.1e-26 3
UNIPROTKB|A6QQI5 - symbol:ATG4D "ATG4D protein" species:9... 176 3.2e-26 3
SGD|S000005167 - symbol:ATG4 "Conserved cysteine protease... 201 2.0e-24 3
DICTYBASE|DDB_G0273553 - symbol:atg4-2 "peptidase C54 fam... 181 3.1e-24 3
DICTYBASE|DDB_G0273443 - symbol:atg4-1 "peptidase C54 fam... 181 3.1e-24 3
UNIPROTKB|F1MJ23 - symbol:ATG4C "Uncharacterized protein"... 197 3.1e-23 2
UNIPROTKB|Q96DT6 - symbol:ATG4C "Cysteine protease ATG4C"... 196 4.5e-23 2
UNIPROTKB|E2R5A4 - symbol:ATG4C "Uncharacterized protein"... 194 8.5e-23 2
UNIPROTKB|F1S810 - symbol:ATG4C "Uncharacterized protein"... 187 7.1e-22 2
RGD|1598323 - symbol:Atg4c "autophagy related 4C, cystein... 189 7.6e-22 2
CGD|CAL0001444 - symbol:orf19.2401 species:5476 "Candida ... 167 5.0e-21 3
UNIPROTKB|K7EP43 - symbol:ATG4D "Cysteine protease ATG4D"... 196 2.3e-20 2
RGD|1309664 - symbol:Atg4b "autophagy related 4B, cystein... 185 1.6e-17 2
UNIPROTKB|K7ESM7 - symbol:ATG4D "Cysteine protease ATG4D"... 144 2.9e-17 2
UNIPROTKB|K7ERK1 - symbol:ATG4D "Cysteine protease ATG4D"... 196 9.0e-17 2
UNIPROTKB|C9J1C1 - symbol:ATG4B "Cysteine protease ATG4B"... 195 2.1e-15 1
UNIPROTKB|K7GQT4 - symbol:LOC100156732 "Uncharacterized p... 110 4.8e-15 3
UNIPROTKB|A6NGQ4 - symbol:ATG4C "Cysteine protease ATG4C"... 190 8.3e-15 1
UNIPROTKB|C9JC51 - symbol:ATG4C "Cysteine protease ATG4C"... 189 1.1e-14 1
UNIPROTKB|H7C2A6 - symbol:ATG4B "Cysteine protease ATG4B"... 187 1.9e-14 1
POMBASE|SPAC19B12.08 - symbol:atg4 "Atg8 deconjugator Atg... 153 9.5e-14 2
UNIPROTKB|K7EPJ0 - symbol:ATG4D "ATG4 autophagy related 4... 180 1.2e-13 1
UNIPROTKB|K7GSY8 - symbol:LOC100156732 "Uncharacterized p... 76 2.5e-11 3
UNIPROTKB|Q969K0 - symbol:ATG4D "Cysteine protease ATG4D"... 120 6.2e-07 1
UNIPROTKB|H7BZW5 - symbol:ATG4C "Cysteine protease ATG4C"... 89 6.8e-07 2
UNIPROTKB|K7EMB9 - symbol:ATG4D "Cysteine protease ATG4D"... 110 7.8e-06 1
UNIPROTKB|K7EN30 - symbol:ATG4D "Cysteine protease ATG4D"... 85 0.00097 2
>FB|FBgn0031298 [details] [associations]
symbol:Atg4 "Autophagy-specific gene 4" species:7227
"Drosophila melanogaster" [GO:0004197 "cysteine-type endopeptidase
activity" evidence=ISS] [GO:0010506 "regulation of autophagy"
evidence=IMP] Pfam:PF03416 GO:GO:0005737 EMBL:AE014134
GO:GO:0015031 GO:GO:0006914 GO:GO:0006508 GO:GO:0004197
eggNOG:NOG239662 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
GeneTree:ENSGT00530000063000 EMBL:AY058573 RefSeq:NP_608563.1
UniGene:Dm.13477 SMR:Q9VPW2 IntAct:Q9VPW2 MINT:MINT-754833
STRING:Q9VPW2 MEROPS:C54.A04 EnsemblMetazoa:FBtr0077953
GeneID:33283 KEGG:dme:Dmel_CG4428 UCSC:CG4428-RA CTD:33283
FlyBase:FBgn0031298 InParanoid:Q9VPW2 OMA:AVCFLCK OrthoDB:EOG4FXPQ5
GenomeRNAi:33283 NextBio:782843 Uniprot:Q9VPW2
Length = 411
Score = 619 (223.0 bits), Expect = 3.6e-80, Sum P(2) = 3.6e-80
Identities = 115/191 (60%), Positives = 144/191 (75%)
Query: 10 QDLEQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDW 69
Q+LE IRRDI SRLW TYR GF P+G+ LTTDKGWGCMLRCGQMV+AQAL+ LHLGRDW
Sbjct: 61 QELELIRRDIQSRLWCTYRHGFSPLGEVQLTTDKGWGCMLRCGQMVLAQALIDLHLGRDW 120
Query: 70 QWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAK 129
W + ++ YLKI+ FED R + YSIHQIA G S+ KAVGEW GPNTVAQ+L+KL +
Sbjct: 121 FWTPDCRDATYLKIVNRFEDVRNSFYSIHQIAQMGESQNKAVGEWLGPNTVAQILKKLVR 180
Query: 130 YDDWSSIVFHVALDNTLVVNQVKKLCTTNKRASSNPQWQPLVLVIPLRLGIQDINPVYIN 189
+DDWSS+ HVA+D+T+V++ V C + S W+PL+L+IPLRLGI DINP+Y+
Sbjct: 181 FDDWSSLAIHVAMDSTVVLDDVYASC---REGGS---WKPLLLIIPLRLGITDINPLYVP 234
Query: 190 GIKKCYALPIS 200
+K+C L S
Sbjct: 235 ALKRCLELDSS 245
Score = 205 (77.2 bits), Expect = 3.6e-80, Sum P(2) = 3.6e-80
Identities = 38/71 (53%), Positives = 50/71 (70%)
Query: 227 SLGVIGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQDSEKKLDSTYHCPQASRL 286
S G+IGG+PN ALYF+GYV ++V++LDPHT Q G V K +E+ D TYH A+RL
Sbjct: 245 SCGMIGGRPNQALYFLGYVDDEVLYLDPHTTQRTGAVAQKTAAAEQDYDETYHQKHAARL 304
Query: 287 HILHMDPSIAV 297
+ MDPS+AV
Sbjct: 305 NFSAMDPSLAV 315
>UNIPROTKB|Q5ZIW7 [details] [associations]
symbol:ATG4A "Cysteine protease ATG4A" species:9031 "Gallus
gallus" [GO:0006508 "proteolysis" evidence=IEA] [GO:0006914
"autophagy" evidence=IEA] [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
MEROPS:C54.002 CTD:115201 HOVERGEN:HBG050536 EMBL:AJ720667
IPI:IPI00596391 RefSeq:NP_001258916.1 RefSeq:XP_003641164.1
UniGene:Gga.53916 ProteinModelPortal:Q5ZIW7 SMR:Q5ZIW7
GeneID:772074 KEGG:gga:772074 InParanoid:Q5ZIW7 Uniprot:Q5ZIW7
Length = 380
Score = 496 (179.7 bits), Expect = 8.1e-79, Sum P(3) = 8.1e-79
Identities = 85/156 (54%), Positives = 121/156 (77%)
Query: 9 HQDLEQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRD 68
++D ++ D+++RLWFTYR+ F PIG +G ++D GWGCMLRCGQM++AQAL+ HLGRD
Sbjct: 22 NEDKSKLLLDVSARLWFTYRRKFSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRD 81
Query: 69 WQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL 127
WQW + K+ E Y +IL F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL+KL
Sbjct: 82 WQWEKHKKQPEEYHRILHCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKL 141
Query: 128 AKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRASS 163
A +D+W+S+ +V++DNT+V+ +KK+C + ++SS
Sbjct: 142 ALFDEWNSLAVYVSMDNTVVIEDIKKMCRSPPQSSS 177
Score = 204 (76.9 bits), Expect = 8.1e-79, Sum P(3) = 8.1e-79
Identities = 38/77 (49%), Positives = 56/77 (72%)
Query: 222 FTFPQSLGVIGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQDSEKKLDSTYHCP 281
F PQSLG +GGKPN+A YFIG++GN++I+LDPHT Q+ D E++ D ++HC
Sbjct: 231 FKMPQSLGALGGKPNNAYYFIGFLGNELIYLDPHTTQSF---VDSEENGTVD-DQSFHCQ 286
Query: 282 QAS-RLHILHMDPSIAV 297
QA R+ I+++DPS+A+
Sbjct: 287 QAPHRMKIMNLDPSVAL 303
Score = 124 (48.7 bits), Expect = 8.1e-79, Sum P(3) = 8.1e-79
Identities = 21/34 (61%), Positives = 28/34 (82%)
Query: 167 WQPLVLVIPLRLGIQDINPVYINGIKKCYALPIS 200
W+PL+L+IPLRLGI INPVYI+ K+C+ +P S
Sbjct: 203 WKPLLLIIPLRLGINHINPVYIDAFKECFKMPQS 236
>ZFIN|ZDB-GENE-040917-3 [details] [associations]
symbol:atg4b "ATG4 autophagy related 4 homolog B (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] Pfam:PF03416 ZFIN:ZDB-GENE-040917-3
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 eggNOG:NOG239662 HOGENOM:HOG000007008 OMA:PYRESST
InterPro:IPR005078 PANTHER:PTHR22624 HOVERGEN:HBG050536
MEROPS:C54.003 OrthoDB:EOG4JWVDK EMBL:BC076463 IPI:IPI00491010
UniGene:Dr.89769 ProteinModelPortal:Q6DG88 SMR:Q6DG88 STRING:Q6DG88
Ensembl:ENSDART00000121558 GeneTree:ENSGT00530000063000
InParanoid:Q6DG88 Bgee:Q6DG88 Uniprot:Q6DG88
Length = 394
Score = 489 (177.2 bits), Expect = 8.0e-77, Sum P(3) = 8.0e-77
Identities = 82/144 (56%), Positives = 111/144 (77%)
Query: 13 EQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQWN 72
+ I D+TSRLWFTYRK F PIG +G T+D GWGCMLRCGQM++ +AL+ HLGRDW+W+
Sbjct: 40 DDILADVTSRLWFTYRKNFQPIGGTGPTSDTGWGCMLRCGQMILGEALICRHLGRDWKWS 99
Query: 73 VNSKEEA-YLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKYD 131
++ Y+ IL F D++ + YSIHQIA G EGK++G+W+GPNTVAQVL+KLA +D
Sbjct: 100 PGQRQRPEYVSILNAFIDKKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFD 159
Query: 132 DWSSIVFHVALDNTLVVNQVKKLC 155
WS + HVA+DNT+V+ ++K+LC
Sbjct: 160 SWSRLAVHVAMDNTVVIEEIKRLC 183
Score = 199 (75.1 bits), Expect = 8.0e-77, Sum P(3) = 8.0e-77
Identities = 41/76 (53%), Positives = 50/76 (65%)
Query: 222 FTFPQSLGVIGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQDSEKKLDSTYHCP 281
F PQSLGVIGGKPN A YFIG+VG+++I+LDPHT Q D +D D +YHC
Sbjct: 249 FMMPQSLGVIGGKPNSAHYFIGFVGDELIYLDPHTTQP---AVDPSEDGHFP-DDSYHCQ 304
Query: 282 QAS-RLHILHMDPSIA 296
R+HI +DPSIA
Sbjct: 305 HPPCRMHICELDPSIA 320
Score = 117 (46.2 bits), Expect = 8.0e-77, Sum P(3) = 8.0e-77
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 167 WQPLVLVIPLRLGIQDINPVYINGIKKCYALPIS 200
W+PLVL+IPLRLG+ DIN YI +K+C+ +P S
Sbjct: 221 WKPLVLLIPLRLGLSDINEAYIEPLKQCFMMPQS 254
>RGD|1596915 [details] [associations]
symbol:Atg4al1 "autophagy related 4A, cysteine peptidase-like 1"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008234 "cysteine-type
peptidase activity" evidence=ISO] RGD:1596915 Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
HOVERGEN:HBG050536 MEROPS:C54.006 EMBL:BC160890 IPI:IPI00767463
RefSeq:NP_001119770.1 UniGene:Rn.216396 ProteinModelPortal:B1H274
SMR:B1H274 GeneID:678769 KEGG:rno:678769 CTD:678769 NextBio:715090
Genevestigator:B1H274 Uniprot:B1H274
Length = 406
Score = 470 (170.5 bits), Expect = 1.6e-76, Sum P(3) = 1.6e-76
Identities = 79/139 (56%), Positives = 110/139 (79%)
Query: 18 DITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQWNVNSKE 77
DI++RLWFTYR+ F PIG +G ++D GWGCMLRCGQM++AQAL+ HLGRDW W ++
Sbjct: 48 DISARLWFTYRRKFSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWNWERQKEQ 107
Query: 78 -EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKYDDWSSI 136
+ Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQV++KLA +D+W+S+
Sbjct: 108 PKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVIKKLALFDEWNSL 167
Query: 137 VFHVALDNTLVVNQVKKLC 155
+V++DNT+V+ +KK+C
Sbjct: 168 AVYVSMDNTVVIEDIKKMC 186
Score = 205 (77.2 bits), Expect = 1.6e-76, Sum P(3) = 1.6e-76
Identities = 41/86 (47%), Positives = 58/86 (67%)
Query: 222 FTFPQSLGVIGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQDSEKKLDSTYHCP 281
F PQSLG +GGKPN+A YFIG +G+++IFLDPHT Q D E+ D T+HC
Sbjct: 249 FKMPQSLGALGGKPNNAYYFIGSLGDELIFLDPHTTQTF---VDTEESGLVD-DHTFHCL 304
Query: 282 QA-SRLHILHMDPSIAVVSQRSYSDY 306
Q+ R+ IL++DPS+A+V Q ++ +
Sbjct: 305 QSPQRMSILNLDPSVALVGQGAFMGF 330
Score = 127 (49.8 bits), Expect = 1.6e-76, Sum P(3) = 1.6e-76
Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 154 LCTTNKRASSNP--QWQPLVLVIPLRLGIQDINPVYINGIKKCYALPIS 200
+ ++ + +S P W+PL+L++PLRLGI INPVYI K+C+ +P S
Sbjct: 206 IASSQSKGTSAPCLAWKPLLLIVPLRLGINQINPVYIEAFKECFKMPQS 254
>UNIPROTKB|Q6PZ05 [details] [associations]
symbol:ATG4A "Cysteine protease ATG4A" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] Pfam:PF03416 GO:GO:0005737
GO:GO:0015031 GO:GO:0006914 GO:GO:0008234 GO:GO:0006508
eggNOG:NOG239662 HOGENOM:HOG000007008 KO:K08342 InterPro:IPR005078
PANTHER:PTHR22624 EMBL:AY570549 IPI:IPI00693458
RefSeq:NP_001001171.1 UniGene:Bt.13730 ProteinModelPortal:Q6PZ05
SMR:Q6PZ05 MEROPS:C54.002 GeneID:408003 KEGG:bta:408003 CTD:115201
HOVERGEN:HBG050536 InParanoid:Q6PZ05 OrthoDB:EOG4M91RH
NextBio:20818623 Uniprot:Q6PZ05
Length = 398
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 131/282 (46%), Positives = 186/282 (65%)
Query: 18 DITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQWNVNSKE 77
DI++RLWFTYR+ F PIG +G ++D GWGCMLRCGQM++AQAL+ HLGRDW W ++
Sbjct: 48 DISARLWFTYRRKFSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWNWEKQKEQ 107
Query: 78 -EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKYDDWSSI 136
+ Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL+KLA +D+W+S+
Sbjct: 108 PKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSL 167
Query: 137 VFHVALDNTLVVNQVKKLCTTNKRASSNPQWQPLVLVIPLRLGIQDINPVYINGIKKCYA 196
+V++DNT+V+ +KK+C T ++ P +PL L Q P K
Sbjct: 168 AVYVSMDNTVVIEDIKKMCRTLSLSADTPAERPLE---SLTASNQSKGPSACCTAWKPLL 224
Query: 197 LPISPVYDMVKILSSTYNMQTPRYEFTFPQSLGVIGGKPNHALYFIGYVGNDVIFLDPHT 256
L I P+ + ++ Y + + F PQSLG +GGKPN+A YFIG++G+++IFLDPHT
Sbjct: 225 L-IVPLRLGINQINPVY-VDAFKECFKMPQSLGALGGKPNNAYYFIGFLGDELIFLDPHT 282
Query: 257 NQNIGCVYDKEQDSEKKLDSTYHCPQA-SRLHILHMDPSIAV 297
Q D E++ D T+HC Q R++IL++DPS+A+
Sbjct: 283 TQTF---VDTEENGTAD-DQTFHCLQPPQRMNILNLDPSVAL 320
>UNIPROTKB|A6QLH1 [details] [associations]
symbol:ATG4A "ATG4 autophagy related 4 homolog A (S.
cerevisiae)" species:9913 "Bos taurus" [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] Pfam:PF03416 GO:GO:0005737 GO:GO:0015031
GO:GO:0006914 GO:GO:0008234 GO:GO:0006508 InterPro:IPR005078
PANTHER:PTHR22624 IPI:IPI00693458 UniGene:Bt.13730
HOVERGEN:HBG050536 OMA:DIKKMCC GeneTree:ENSGT00530000063000
EMBL:DAAA02071498 EMBL:BC147962 SMR:A6QLH1
Ensembl:ENSBTAT00000018239 InParanoid:A6QLH1 Uniprot:A6QLH1
Length = 398
Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
Identities = 131/282 (46%), Positives = 186/282 (65%)
Query: 18 DITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQWNVNSKE 77
DI++RLWFTYR+ F PIG +G ++D GWGCMLRCGQM++AQAL+ HLGRDW W ++
Sbjct: 48 DISARLWFTYRRKFSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWNWEKQKEQ 107
Query: 78 -EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKYDDWSSI 136
+ Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL+KLA +D+W+S+
Sbjct: 108 PKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSL 167
Query: 137 VFHVALDNTLVVNQVKKLCTTNKRASSNPQWQPLVLVIPLRLGIQDINPVYINGIKKCYA 196
+V++DNT+V+ +KK+C T ++ P +PL L Q P K
Sbjct: 168 AVYVSMDNTVVIEDIKKMCRTLSLSADTPAERPLE---SLTASNQSKGPSACCTAWKPLL 224
Query: 197 LPISPVYDMVKILSSTYNMQTPRYEFTFPQSLGVIGGKPNHALYFIGYVGNDVIFLDPHT 256
L I P+ + ++ Y + + F PQSLG +GGKPN+A YFIG++G+++IFLDPHT
Sbjct: 225 L-IVPLRLGINQINPVY-VDAFKECFKMPQSLGALGGKPNNAYYFIGFLGDELIFLDPHT 282
Query: 257 NQNIGCVYDKEQDSEKKLDSTYHCPQA-SRLHILHMDPSIAV 297
Q D E++ D T+HC Q R++IL++DPS+A+
Sbjct: 283 TQTF---VDTEENGTVD-DQTFHCLQPPQRMNILNLDPSVAL 320
>UNIPROTKB|Q9Y4P1 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:9606 "Homo
sapiens" [GO:0015031 "protein transport" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006508 "proteolysis" evidence=IDA] [GO:0008234
"cysteine-type peptidase activity" evidence=IDA] [GO:0006914
"autophagy" evidence=IGI] [GO:0000045 "autophagic vacuole assembly"
evidence=IGI] [GO:0010508 "positive regulation of autophagy"
evidence=IDA] [GO:0004175 "endopeptidase activity" evidence=IDA]
EMBL:AJ504652 Pfam:PF03416 GO:GO:0005737 GO:GO:0015031
GO:GO:0000045 GO:GO:0008234 GO:GO:0006508 GO:GO:0045732
eggNOG:NOG239662 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
HOVERGEN:HBG050536 MEROPS:C54.003 CTD:23192 EMBL:AB066215
EMBL:AB023160 EMBL:AK027332 EMBL:AK027462 EMBL:AK027763
EMBL:AK125277 EMBL:AL080168 EMBL:AC133528 EMBL:BC000719
IPI:IPI00554649 IPI:IPI00647200 IPI:IPI00746254 IPI:IPI00941681
IPI:IPI01018366 PIR:T12492 RefSeq:NP_037457.3 RefSeq:NP_847896.1
UniGene:Hs.283610 PDB:2CY7 PDB:2D1I PDB:2Z0D PDB:2Z0E PDB:2ZZP
PDBsum:2CY7 PDBsum:2D1I PDBsum:2Z0D PDBsum:2Z0E PDBsum:2ZZP
ProteinModelPortal:Q9Y4P1 SMR:Q9Y4P1 IntAct:Q9Y4P1
MINT:MINT-1414043 STRING:Q9Y4P1 PhosphoSite:Q9Y4P1 DMDM:296434400
PaxDb:Q9Y4P1 PRIDE:Q9Y4P1 DNASU:23192 Ensembl:ENST00000402096
Ensembl:ENST00000404914 Ensembl:ENST00000405546 GeneID:23192
KEGG:hsa:23192 UCSC:uc002wbu.3 UCSC:uc002wbv.3 UCSC:uc002wbw.3
GeneCards:GC02P242578 H-InvDB:HIX0180188 HGNC:HGNC:20790
HPA:CAB037195 MIM:611338 neXtProt:NX_Q9Y4P1 PharmGKB:PA134898340
BindingDB:Q9Y4P1 ChEMBL:CHEMBL1741221 ChiTaRS:ATG4B
EvolutionaryTrace:Q9Y4P1 GenomeRNAi:23192 NextBio:44679
ArrayExpress:Q9Y4P1 Bgee:Q9Y4P1 CleanEx:HS_ATG4B
Genevestigator:Q9Y4P1 GermOnline:ENSG00000168397 Uniprot:Q9Y4P1
Length = 393
Score = 489 (177.2 bits), Expect = 1.4e-64, Sum P(2) = 1.4e-64
Identities = 82/147 (55%), Positives = 113/147 (76%)
Query: 13 EQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQWN 72
++I D+ SRLWFTYRK F IG +G T+D GWGCMLRCGQM+ AQAL+ HLGRDW+W
Sbjct: 40 DEILSDVASRLWFTYRKNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWT 99
Query: 73 VNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKYD 131
++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL+KLA +D
Sbjct: 100 QRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFD 159
Query: 132 DWSSIVFHVALDNTLVVNQVKKLCTTN 158
WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 160 TWSSLAVHIAMDNTVVMEEIRRLCRTS 186
Score = 187 (70.9 bits), Expect = 1.4e-64, Sum P(2) = 1.4e-64
Identities = 43/90 (47%), Positives = 57/90 (63%)
Query: 209 LSSTYNMQTPRYEFTFPQSLGVIGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQ 268
++ Y ++T ++ F PQSLGVIGGKPN A YFIGYVG ++I+LDPHT Q V +
Sbjct: 235 INEAY-VETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQP--AV--EPT 289
Query: 269 DSEKKLDSTYHCPQAS-RLHILHMDPSIAV 297
D D ++HC R+ I +DPSIAV
Sbjct: 290 DGCFIPDESFHCQHPPCRMSIAELDPSIAV 319
Score = 113 (44.8 bits), Expect = 8.8e-57, Sum P(2) = 8.8e-57
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 167 WQPLVLVIPLRLGIQDINPVYINGIKKCYALPIS 200
W+PLVL+IPLRLG+ DIN Y+ +K C+ +P S
Sbjct: 219 WRPLVLLIPLRLGLTDINEAYVETLKHCFMMPQS 252
>MGI|MGI:1913865 [details] [associations]
symbol:Atg4b "autophagy related 4B, cysteine peptidase"
species:10090 "Mus musculus" [GO:0000045 "autophagic vacuole
assembly" evidence=ISO] [GO:0004175 "endopeptidase activity"
evidence=ISO] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0006914
"autophagy" evidence=ISO;ISS] [GO:0008152 "metabolic process"
evidence=IDA;TAS] [GO:0008233 "peptidase activity" evidence=IDA]
[GO:0008234 "cysteine-type peptidase activity" evidence=ISO;TAS]
[GO:0010508 "positive regulation of autophagy" evidence=ISO]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=ISO] MGI:MGI:1913865
Pfam:PF03416 GO:GO:0005737 GO:GO:0015031 GO:GO:0000045
GO:GO:0006914 GO:GO:0006508 GO:GO:0045732 GO:GO:0004197
eggNOG:NOG239662 HOGENOM:HOG000007008 KO:K08342 InterPro:IPR005078
PANTHER:PTHR22624 HOVERGEN:HBG050536 MEROPS:C54.003 CTD:23192
OrthoDB:EOG4JWVDK GeneTree:ENSGT00530000063000 EMBL:AJ504653
EMBL:AK028712 EMBL:AK031570 EMBL:AK075796 EMBL:AK088811
EMBL:BC027184 EMBL:AK129242 IPI:IPI00387185 RefSeq:NP_777363.1
UniGene:Mm.29087 ProteinModelPortal:Q8BGE6 SMR:Q8BGE6 STRING:Q8BGE6
PhosphoSite:Q8BGE6 PaxDb:Q8BGE6 PRIDE:Q8BGE6
Ensembl:ENSMUST00000027502 GeneID:66615 KEGG:mmu:66615
UCSC:uc007cej.1 InParanoid:Q8BGE6 NextBio:322176 Bgee:Q8BGE6
CleanEx:MM_ATG4B Genevestigator:Q8BGE6
GermOnline:ENSMUSG00000026280 Uniprot:Q8BGE6
Length = 393
Score = 486 (176.1 bits), Expect = 1.4e-64, Sum P(2) = 1.4e-64
Identities = 81/147 (55%), Positives = 112/147 (76%)
Query: 13 EQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQWN 72
++I D+ SRLWFTYR+ F IG +G T+D GWGCMLRCGQM+ AQAL+ HLGRDW+W
Sbjct: 40 DEILSDVASRLWFTYRRNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWT 99
Query: 73 VNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKYD 131
++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL+KLA +D
Sbjct: 100 QRKRQPDSYFNVLNAFLDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFD 159
Query: 132 DWSSIVFHVALDNTLVVNQVKKLCTTN 158
WSS+ H+A+DNT+V+ ++++LC N
Sbjct: 160 TWSSLAVHIAMDNTVVMEEIRRLCRAN 186
Score = 190 (71.9 bits), Expect = 1.4e-64, Sum P(2) = 1.4e-64
Identities = 45/90 (50%), Positives = 59/90 (65%)
Query: 209 LSSTYNMQTPRYEFTFPQSLGVIGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQ 268
++ Y ++T ++ F PQSLGVIGGKPN A YFIGYVG ++I+LDPHT Q V +
Sbjct: 235 INEAY-VETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQP--AV--ELT 289
Query: 269 DSEKKLDSTYHCPQA-SRLHILHMDPSIAV 297
DS D ++HC SR+ I +DPSIAV
Sbjct: 290 DSCFIPDESFHCQHPPSRMGIGELDPSIAV 319
Score = 113 (44.8 bits), Expect = 1.8e-56, Sum P(2) = 1.8e-56
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 167 WQPLVLVIPLRLGIQDINPVYINGIKKCYALPIS 200
W+PLVL+IPLRLG+ DIN Y+ +K C+ +P S
Sbjct: 219 WRPLVLLIPLRLGLTDINEAYVETLKHCFMMPQS 252
>UNIPROTKB|F1NW36 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000045 "autophagic vacuole assembly"
evidence=IEA] Pfam:PF03416 GO:GO:0005737 GO:GO:0015031
GO:GO:0000045 GO:GO:0008234 GO:GO:0006508 InterPro:IPR005078
PANTHER:PTHR22624 IPI:IPI00576723 GeneTree:ENSGT00530000063000
OMA:AVCFLCK EMBL:AADN02024262 Ensembl:ENSGALT00000010179
Uniprot:F1NW36
Length = 391
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 138/292 (47%), Positives = 190/292 (65%)
Query: 13 EQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQWN 72
E+I D+TSRLWFTYRK F IG +G T+D GWGCMLRCGQM+ AQAL+ HLGRDW+W
Sbjct: 37 EEILLDVTSRLWFTYRKNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWI 96
Query: 73 VNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKYD 131
++ + Y +L F D++ + YSIHQIA G EGK++G+W+GPNTVAQVL+KLA +D
Sbjct: 97 KGKRQTDNYFSVLNAFIDKKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLATFD 156
Query: 132 DWSSIVFHVALDNTLVVNQVKKLCTTN---KRASSNPQWQPLVLV--IPLRLGIQDINPV 186
WSS+ H+A+DNT+V+ ++++LC +N A++ P + VL P G++D +
Sbjct: 157 TWSSLAVHIAMDNTVVMEEIRRLCQSNFSCAGAAACPAVEADVLYNGYPEEAGVRDKLSL 216
Query: 187 YINGIKKCYALPISPVYDMVKILSSTYNMQTPRYEFTFPQSLGVIGGKPNHALYFIGYVG 246
+ K L I + +I + Y ++T ++ F PQSLGVIGGKPN A YFIGYVG
Sbjct: 217 W-----KPLVLLIPLRLGLTEI-NEAY-IETLKHCFMMPQSLGVIGGKPNSAHYFIGYVG 269
Query: 247 NDVIFLDPHTNQNIGCVYDKEQDSEKKLDSTYHCPQAS-RLHILHMDPSIAV 297
++I+LDPHT Q V + DS D ++HC R+ I +DPSIAV
Sbjct: 270 EELIYLDPHTTQP--AV--EPSDSGCLPDESFHCQHPPCRMSIAELDPSIAV 317
>UNIPROTKB|Q6PZ02 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:9031 "Gallus
gallus" [GO:0006508 "proteolysis" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0000045 "autophagic vacuole assembly"
evidence=IEA] Pfam:PF03416 GO:GO:0005737 GO:GO:0015031
GO:GO:0000045 GO:GO:0008234 GO:GO:0006508 eggNOG:NOG239662
HOGENOM:HOG000007008 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
HOVERGEN:HBG050536 MEROPS:C54.003 CTD:23192 OrthoDB:EOG4JWVDK
EMBL:AY570552 EMBL:AJ720212 IPI:IPI00576723 IPI:IPI00585227
RefSeq:NP_998738.1 UniGene:Gga.16354 ProteinModelPortal:Q6PZ02
SMR:Q6PZ02 STRING:Q6PZ02 GeneID:404750 KEGG:gga:404750
InParanoid:Q6PZ02 NextBio:20817710 Uniprot:Q6PZ02
Length = 393
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 138/292 (47%), Positives = 190/292 (65%)
Query: 13 EQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQWN 72
E+I D+TSRLWFTYRK F IG +G T+D GWGCMLRCGQM+ AQAL+ HLGRDW+W
Sbjct: 39 EEILLDVTSRLWFTYRKNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWI 98
Query: 73 VNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKYD 131
++ + Y +L F D++ + YSIHQIA G EGK++G+W+GPNTVAQVL+KLA +D
Sbjct: 99 KGKRQTDNYFSVLNAFIDKKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLATFD 158
Query: 132 DWSSIVFHVALDNTLVVNQVKKLCTTN---KRASSNPQWQPLVLV--IPLRLGIQDINPV 186
WSS+ H+A+DNT+V+ ++++LC +N A++ P + VL P G++D +
Sbjct: 159 TWSSLAVHIAMDNTVVMEEIRRLCQSNFSCAGAAACPAVEADVLYNGYPEEAGVRDKLSL 218
Query: 187 YINGIKKCYALPISPVYDMVKILSSTYNMQTPRYEFTFPQSLGVIGGKPNHALYFIGYVG 246
+ K L I + +I + Y ++T ++ F PQSLGVIGGKPN A YFIGYVG
Sbjct: 219 W-----KPLVLLIPLRLGLTEI-NEAY-IETLKHCFMMPQSLGVIGGKPNSAHYFIGYVG 271
Query: 247 NDVIFLDPHTNQNIGCVYDKEQDSEKKLDSTYHCPQAS-RLHILHMDPSIAV 297
++I+LDPHT Q V + DS D ++HC R+ I +DPSIAV
Sbjct: 272 EELIYLDPHTTQP--AV--EPSDSGCLPDESFHCQHPPCRMSIAELDPSIAV 319
>UNIPROTKB|F1MJZ9 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:9913 "Bos
taurus" [GO:0000045 "autophagic vacuole assembly" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
Pfam:PF03416 GO:GO:0005737 GO:GO:0015031 GO:GO:0000045
GO:GO:0008234 GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624
IPI:IPI00704687 GeneTree:ENSGT00530000063000 EMBL:DAAA02009542
Ensembl:ENSBTAT00000020474 OMA:IPGALPM Uniprot:F1MJZ9
Length = 393
Score = 479 (173.7 bits), Expect = 1.3e-63, Sum P(2) = 1.3e-63
Identities = 81/147 (55%), Positives = 113/147 (76%)
Query: 13 EQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQWN 72
++I D+ SRLWFTYRK F IG +G T+D GWGCMLRCGQM+ AQAL+ HLGRDW+W
Sbjct: 40 DEILADVASRLWFTYRKNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWT 99
Query: 73 VNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKYD 131
++ ++Y +L+ F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL+KLA +D
Sbjct: 100 QRKRQPDSYCSVLQAFLDRKDSCYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFD 159
Query: 132 DWSSIVFHVALDNTLVVNQVKKLCTTN 158
WS++ HVA+DNT+V+ +++LC ++
Sbjct: 160 TWSALAVHVAMDNTVVMADIRRLCRSS 186
Score = 188 (71.2 bits), Expect = 1.3e-63, Sum P(2) = 1.3e-63
Identities = 41/82 (50%), Positives = 51/82 (62%)
Query: 217 TPRYEFTFPQSLGVIGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQDSEKKLDS 276
T ++ F PQSLGVIGGKPN A YFIGYVG ++I+LDPHT Q D+ D
Sbjct: 242 TLKHCFRMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVAAADRCPVP----DE 297
Query: 277 TYHCPQA-SRLHILHMDPSIAV 297
++HC R+ I +DPSIAV
Sbjct: 298 SFHCQHPPGRMSIAELDPSIAV 319
Score = 108 (43.1 bits), Expect = 3.3e-55, Sum P(2) = 3.3e-55
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 167 WQPLVLVIPLRLGIQDINPVYINGIKKCYALPIS 200
W+PLVL+IPLRLG+ D+N Y +K C+ +P S
Sbjct: 219 WRPLVLLIPLRLGLADVNAAYAGTLKHCFRMPQS 252
>UNIPROTKB|Q6PZ03 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] Pfam:PF03416 GO:GO:0005737
GO:GO:0015031 GO:GO:0006914 GO:GO:0008234 GO:GO:0006508
eggNOG:NOG239662 HOGENOM:HOG000007008 KO:K08342 InterPro:IPR005078
PANTHER:PTHR22624 HOVERGEN:HBG050536 EMBL:AY570550 EMBL:AY570551
IPI:IPI00704687 IPI:IPI00704763 RefSeq:NP_001001170.1
UniGene:Bt.49066 ProteinModelPortal:Q6PZ03 SMR:Q6PZ03 STRING:Q6PZ03
MEROPS:C54.003 GeneID:408002 KEGG:bta:408002 CTD:23192
InParanoid:Q6PZ03 OrthoDB:EOG4JWVDK NextBio:20818622 Uniprot:Q6PZ03
Length = 393
Score = 479 (173.7 bits), Expect = 1.3e-63, Sum P(2) = 1.3e-63
Identities = 81/147 (55%), Positives = 113/147 (76%)
Query: 13 EQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQWN 72
++I D+ SRLWFTYRK F IG +G T+D GWGCMLRCGQM+ AQAL+ HLGRDW+W
Sbjct: 40 DEILADVASRLWFTYRKNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWT 99
Query: 73 VNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKYD 131
++ ++Y +L+ F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL+KLA +D
Sbjct: 100 QRKRQPDSYCSVLQAFLDRKDSCYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFD 159
Query: 132 DWSSIVFHVALDNTLVVNQVKKLCTTN 158
WS++ HVA+DNT+V+ +++LC ++
Sbjct: 160 TWSALAVHVAMDNTVVMADIRRLCRSS 186
Score = 188 (71.2 bits), Expect = 1.3e-63, Sum P(2) = 1.3e-63
Identities = 41/82 (50%), Positives = 51/82 (62%)
Query: 217 TPRYEFTFPQSLGVIGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQDSEKKLDS 276
T ++ F PQSLGVIGGKPN A YFIGYVG ++I+LDPHT Q D+ D
Sbjct: 242 TLKHCFRMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVAAADRCPVP----DE 297
Query: 277 TYHCPQA-SRLHILHMDPSIAV 297
++HC R+ I +DPSIAV
Sbjct: 298 SFHCQHPPGRMSIAELDPSIAV 319
Score = 108 (43.1 bits), Expect = 3.3e-55, Sum P(2) = 3.3e-55
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 167 WQPLVLVIPLRLGIQDINPVYINGIKKCYALPIS 200
W+PLVL+IPLRLG+ D+N Y +K C+ +P S
Sbjct: 219 WRPLVLLIPLRLGLADVNAAYAGTLKHCFRMPQS 252
>UNIPROTKB|F1LRG2 [details] [associations]
symbol:Atg4b "Protein Atg4b" species:10116 "Rattus
norvegicus" [GO:0000045 "autophagic vacuole assembly" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
RGD:1309664 Pfam:PF03416 GO:GO:0005737 GO:GO:0015031 GO:GO:0000045
GO:GO:0008234 GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624
GeneTree:ENSGT00530000063000 OMA:AVCFLCK IPI:IPI00363207
PRIDE:F1LRG2 Ensembl:ENSRNOT00000025529 ArrayExpress:F1LRG2
Uniprot:F1LRG2
Length = 394
Score = 481 (174.4 bits), Expect = 1.6e-63, Sum P(2) = 1.6e-63
Identities = 80/144 (55%), Positives = 111/144 (77%)
Query: 13 EQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQWN 72
++I D+ SRLWFTYR+ F IG +G T+D GWGCMLRCGQM+ AQAL+ HLGRDW+W
Sbjct: 41 DEILSDVASRLWFTYRRNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWT 100
Query: 73 VNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKYD 131
++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL+KLA +D
Sbjct: 101 QRKRQPDSYFSVLNAFLDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFD 160
Query: 132 DWSSIVFHVALDNTLVVNQVKKLC 155
WSS+ H+A+DNT+V+ ++++LC
Sbjct: 161 TWSSLAVHIAMDNTVVMEEIRRLC 184
Score = 185 (70.2 bits), Expect = 1.6e-63, Sum P(2) = 1.6e-63
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 209 LSSTYNMQTPRYEFTFPQSLGVIGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQ 268
++ Y ++T ++ F PQSLGVIGGKPN A YFIGYVG ++I+LDPHT Q V +
Sbjct: 236 INEAY-VETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQP--AV--ELT 290
Query: 269 DSEKKLDSTYHCPQAS-RLHILHMDPSIAV 297
DS D ++HC R+ I +DPSIAV
Sbjct: 291 DSCFIPDESFHCQHPPCRMGIGELDPSIAV 320
Score = 113 (44.8 bits), Expect = 6.1e-56, Sum P(2) = 6.1e-56
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 167 WQPLVLVIPLRLGIQDINPVYINGIKKCYALPIS 200
W+PLVL+IPLRLG+ DIN Y+ +K C+ +P S
Sbjct: 220 WRPLVLLIPLRLGLTDINEAYVETLKHCFMMPQS 253
>UNIPROTKB|Q8WYN0 [details] [associations]
symbol:ATG4A "Cysteine protease ATG4A" species:9606 "Homo
sapiens" [GO:0006914 "autophagy" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006508 "proteolysis" evidence=IDA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=ISS] Pfam:PF03416 GO:GO:0005737
GO:GO:0015031 GO:GO:0006914 GO:GO:0008234 GO:GO:0006508
EMBL:CH471120 eggNOG:NOG239662 KO:K08342 InterPro:IPR005078
PANTHER:PTHR22624 MEROPS:C54.002 CTD:115201 HOVERGEN:HBG050536
OrthoDB:EOG4M91RH EMBL:AJ504651 EMBL:AB066214 EMBL:AJ320508
EMBL:AJ320509 EMBL:AK314429 EMBL:AL031177 EMBL:BC041862
EMBL:BC061696 IPI:IPI00064708 IPI:IPI00292327 IPI:IPI00328880
IPI:IPI00640839 RefSeq:NP_443168.2 RefSeq:NP_840054.1
UniGene:Hs.8763 PDB:2FUY PDB:2P82 PDBsum:2FUY PDBsum:2P82
ProteinModelPortal:Q8WYN0 SMR:Q8WYN0 IntAct:Q8WYN0 STRING:Q8WYN0
DMDM:61211859 PaxDb:Q8WYN0 PRIDE:Q8WYN0 DNASU:115201
Ensembl:ENST00000345734 Ensembl:ENST00000372232
Ensembl:ENST00000372254 Ensembl:ENST00000457035 GeneID:115201
KEGG:hsa:115201 UCSC:uc004enr.3 UCSC:uc004ent.3
GeneCards:GC0XP107334 HGNC:HGNC:16489 HPA:HPA036374 MIM:300663
neXtProt:NX_Q8WYN0 PharmGKB:PA25184 InParanoid:Q8WYN0 OMA:DIKKMCC
PhylomeDB:Q8WYN0 EvolutionaryTrace:Q8WYN0 GenomeRNAi:115201
NextBio:79530 ArrayExpress:Q8WYN0 Bgee:Q8WYN0 Genevestigator:Q8WYN0
GermOnline:ENSG00000101844 Uniprot:Q8WYN0
Length = 398
Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
Identities = 128/283 (45%), Positives = 185/283 (65%)
Query: 18 DITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQWNVNSKE 77
DI++RLWFTYR+ F PIG +G ++D GWGCMLRCGQM++AQAL+ HLGRDW W ++
Sbjct: 48 DISARLWFTYRRKFSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWSWEKQKEQ 107
Query: 78 -EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKYDDWSSI 136
+ Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL+KLA +D+W+S+
Sbjct: 108 PKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSL 167
Query: 137 VFHVALDNTLVVNQVKKLCTTNKRASSNPQWQPLVLVIPLRLGIQDINP-VYINGIKKCY 195
+V++DNT+V+ +KK+C ++ +P L Q Y + K
Sbjct: 168 AVYVSMDNTVVIEDIKKMCRVLPLSADTAGDRP---PDSLTASNQSKGTSAYCSAWKPL- 223
Query: 196 ALPISPVYDMVKILSSTYNMQTPRYEFTFPQSLGVIGGKPNHALYFIGYVGNDVIFLDPH 255
L I P+ + ++ Y + + F PQSLG +GGKPN+A YFIG++G+++IFLDPH
Sbjct: 224 -LLIVPLRLGINQINPVY-VDAFKECFKMPQSLGALGGKPNNAYYFIGFLGDELIFLDPH 281
Query: 256 TNQNIGCVYDKEQDSEKKLDSTYHCPQA-SRLHILHMDPSIAV 297
T Q D E++ D T+HC Q+ R++IL++DPS+A+
Sbjct: 282 TTQTF---VDTEENGTVN-DQTFHCLQSPQRMNILNLDPSVAL 320
>UNIPROTKB|E2RLY1 [details] [associations]
symbol:ATG4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015031 "protein transport" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624 OMA:DIKKMCC
GeneTree:ENSGT00530000063000 EMBL:AAEX03026757
Ensembl:ENSCAFT00000028612 Uniprot:E2RLY1
Length = 399
Score = 627 (225.8 bits), Expect = 2.7e-61, P = 2.7e-61
Identities = 129/284 (45%), Positives = 183/284 (64%)
Query: 18 DITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGR-DWQWNVNSK 76
DI +RLWFTYR+ F PIG +G ++D GWGCMLRCGQM++AQAL+ HLGR DW W +
Sbjct: 48 DIRARLWFTYRRKFSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGREDWSWEKQKE 107
Query: 77 E-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKYDDWSS 135
+ Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL+KLA +D+W+S
Sbjct: 108 QPREYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNS 167
Query: 136 IVFHVALDNTLVVNQVKKLCTTNKRASSNPQWQPLVLVIPLRLGIQDIN-PVYINGIKKC 194
+ +V++DNT+V+ +KK+C ++ PL L Q + P K
Sbjct: 168 LAIYVSMDNTVVIEDIKKMCCVLPLSADTIGESPLNT---LNASNQSKSAPASCPAWKPL 224
Query: 195 YALPISPVYDMVKILSSTYNMQTPRYEFTFPQSLGVIGGKPNHALYFIGYVGNDVIFLDP 254
L I P+ + ++ Y + + F PQSLG +GGKPN+A YFIG++G+++IFLDP
Sbjct: 225 --LLIVPLRLGINQINPVY-VDAFKECFKMPQSLGALGGKPNNAYYFIGFLGDELIFLDP 281
Query: 255 HTNQNIGCVYDKEQDSEKKLDSTYHCPQA-SRLHILHMDPSIAV 297
HT Q D E++ D T+HC Q+ R++IL++DPS+A+
Sbjct: 282 HTTQTF---VDTEENGTVD-DQTFHCLQSPQRMNILNLDPSVAL 321
>ZFIN|ZDB-GENE-050522-430 [details] [associations]
symbol:atg4a "ATG4 autophagy related 4 homolog A
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] Pfam:PF03416 ZFIN:ZDB-GENE-050522-430
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 eggNOG:NOG239662 HOGENOM:HOG000007008 KO:K08342
InterPro:IPR005078 PANTHER:PTHR22624 MEROPS:C54.002 CTD:115201
HOVERGEN:HBG050536 OrthoDB:EOG4M91RH GeneTree:ENSGT00530000063000
EMBL:CU571325 EMBL:FP102106 EMBL:BC095617 IPI:IPI00483558
RefSeq:NP_001019605.1 UniGene:Dr.91549 SMR:Q4VBK1
Ensembl:ENSDART00000026666 GeneID:554140 KEGG:dre:554140
InParanoid:Q4VBK1 NextBio:20880699 Uniprot:Q4VBK1
Length = 375
Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
Identities = 105/191 (54%), Positives = 143/191 (74%)
Query: 14 QIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQWNV 73
++ D+ SRLWFTYRK F PIG +G ++D GWGCMLRCGQM++AQAL+ HLGRDW+W+
Sbjct: 41 ELLSDVRSRLWFTYRKKFSPIGGTGPSSDAGWGCMLRCGQMILAQALICSHLGRDWRWDP 100
Query: 74 NSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKYDD 132
+ + Y +IL F D++ + YSIHQ+A G EGK+VGEW+GPNTVAQVL+KLA +DD
Sbjct: 101 EKHQPKEYQRILDCFLDKKDSCYSIHQMAQMGVGEGKSVGEWYGPNTVAQVLKKLALFDD 160
Query: 133 WSSIVFHVALDNTLVVNQVKKLCTTN--KRASSNP-QWQPLVLVIPLRLGIQDINPVYIN 189
W+S+ +V++DNT+V+ +KKLC + S P W+PL+LVIPLR+GI INPVYI
Sbjct: 161 WNSLSVYVSMDNTVVIEDIKKLCVRADLQLQSQQPLDWRPLLLVIPLRMGINSINPVYIQ 220
Query: 190 GIKKCYALPIS 200
+K+C+ +P S
Sbjct: 221 ALKECFKMPQS 231
Score = 176 (67.0 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 39/102 (38%), Positives = 60/102 (58%)
Query: 197 LPISPVYDMVKILSSTYNMQTPRYEFTFPQSLGVIGGKPNHALYFIGYVGNDVIFLDPHT 256
L + P+ + ++ Y +Q + F PQS GV+GGKPN A YFIG++ +++I+LDPHT
Sbjct: 202 LLVIPLRMGINSINPVY-IQALKECFKMPQSCGVLGGKPNLAYYFIGFIDDELIYLDPHT 260
Query: 257 NQNIGCVYDKEQDSEKKLDSTYHCPQAS-RLHILHMDPSIAV 297
Q D E S D ++HC + R+ I +DPS+A+
Sbjct: 261 TQQ---AVDTESGSAVD-DQSFHCQRTPHRMKITSLDPSVAL 298
>UNIPROTKB|F5H7P2 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624 EMBL:AC133528
HGNC:HGNC:20790 ChiTaRS:ATG4B IPI:IPI00937313
ProteinModelPortal:F5H7P2 SMR:F5H7P2 PRIDE:F5H7P2
Ensembl:ENST00000474739 UCSC:uc010zox.2 ArrayExpress:F5H7P2
Bgee:F5H7P2 Uniprot:F5H7P2
Length = 379
Score = 416 (151.5 bits), Expect = 6.9e-57, Sum P(2) = 6.9e-57
Identities = 69/125 (55%), Positives = 97/125 (77%)
Query: 35 GDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQWNVNSKE-EAYLKILKMFEDRRTA 93
G +G T+D GWGCMLRCGQM+ AQAL+ HLGRDW+W ++ ++Y +L F DR+ +
Sbjct: 48 GGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFIDRKDS 107
Query: 94 PYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKYDDWSSIVFHVALDNTLVVNQVKK 153
YSIHQIA G EGK++G+W+GPNTVAQVL+KLA +D WSS+ H+A+DNT+V+ ++++
Sbjct: 108 YYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSSLAVHIAMDNTVVMEEIRR 167
Query: 154 LCTTN 158
LC T+
Sbjct: 168 LCRTS 172
Score = 187 (70.9 bits), Expect = 6.9e-57, Sum P(2) = 6.9e-57
Identities = 43/90 (47%), Positives = 57/90 (63%)
Query: 209 LSSTYNMQTPRYEFTFPQSLGVIGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQ 268
++ Y ++T ++ F PQSLGVIGGKPN A YFIGYVG ++I+LDPHT Q V +
Sbjct: 221 INEAY-VETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQP--AV--EPT 275
Query: 269 DSEKKLDSTYHCPQAS-RLHILHMDPSIAV 297
D D ++HC R+ I +DPSIAV
Sbjct: 276 DGCFIPDESFHCQHPPCRMSIAELDPSIAV 305
Score = 113 (44.8 bits), Expect = 4.2e-49, Sum P(2) = 4.2e-49
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 167 WQPLVLVIPLRLGIQDINPVYINGIKKCYALPIS 200
W+PLVL+IPLRLG+ DIN Y+ +K C+ +P S
Sbjct: 205 WRPLVLLIPLRLGLTDINEAYVETLKHCFMMPQS 238
>UNIPROTKB|H7BYM2 [details] [associations]
symbol:ATG4A "Cysteine protease ATG4A" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624 EMBL:AL031177
HGNC:HGNC:16489 ProteinModelPortal:H7BYM2 PRIDE:H7BYM2
Ensembl:ENST00000394892 Uniprot:H7BYM2
Length = 312
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 118/283 (41%), Positives = 176/283 (62%)
Query: 18 DITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQWNVNSKE 77
D +W ++ + G +G ++D GWGCMLRCGQM++AQAL+ HLGRDW W ++
Sbjct: 21 DTDELVWILGKQHLLKTGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWSWEKQKEQ 80
Query: 78 -EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKYDDWSSI 136
+ Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL+KLA +D+W+S+
Sbjct: 81 PKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSL 140
Query: 137 VFHVALDNTLVVNQVKKLCTTNKRASSNPQWQPLVLVIPLRLGIQDINP-VYINGIKKCY 195
+V++DNT+V+ +KK+C ++ +P L Q Y + K
Sbjct: 141 AVYVSMDNTVVIEDIKKMCRVLPLSADTAGDRP---PDSLTASNQSKGTSAYCSAWKPL- 196
Query: 196 ALPISPVYDMVKILSSTYNMQTPRYEFTFPQSLGVIGGKPNHALYFIGYVGNDVIFLDPH 255
L I P+ + ++ Y + + F PQSLG +GGKPN+A YFIG++G+++IFLDPH
Sbjct: 197 -LLIVPLRLGINQINPVY-VDAFKECFKMPQSLGALGGKPNNAYYFIGFLGDELIFLDPH 254
Query: 256 TNQNIGCVYDKEQDSEKKLDSTYHCPQA-SRLHILHMDPSIAV 297
T Q D E++ D T+HC Q+ R++IL++DPS+A+
Sbjct: 255 TTQTF---VDTEENGTVN-DQTFHCLQSPQRMNILNLDPSVAL 293
>UNIPROTKB|F1RXI5 [details] [associations]
symbol:LOC100156732 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006914 "autophagy"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624 OMA:DIKKMCC
GeneTree:ENSGT00530000063000 EMBL:CU463012
Ensembl:ENSSSCT00000013744 Uniprot:F1RXI5
Length = 359
Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
Identities = 119/283 (42%), Positives = 176/283 (62%)
Query: 18 DITSRLWFTYRKGFVPIGDSG-LTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQWNVNSK 76
DI++RLWFTYR+ F PIG +G + T K C L CGQ++ Q ++ +HLG DW W +
Sbjct: 48 DISARLWFTYRRKFSPIGRTGSVPTTKDM-CELPCGQLIPVQQIVCIHLGTDWNWEKQKE 106
Query: 77 E-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKYDDWSS 135
+ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL+KLA +D+W+S
Sbjct: 107 QPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNS 166
Query: 136 IVFHVALDNTLVVNQVKKLCTTNKRASSNPQWQPLVLVIPLRLGIQDINPVYINGIKKCY 195
+ +V++DNT+V+ +KK+C + S++ + L Q P K
Sbjct: 167 LAVYVSMDNTVVIEDIKKMCCASA-LSADAAVESRR--DSLNASTQSKGPSACRPAWKPL 223
Query: 196 ALPISPVYDMVKILSSTYNMQTPRYEFTFPQSLGVIGGKPNHALYFIGYVGNDVIFLDPH 255
L I P+ + ++ Y + + F PQSLG +GGKPN+A YFIG++G+++IFLDPH
Sbjct: 224 LL-IVPLRLGINQINPVY-VDAFKECFKMPQSLGALGGKPNNAYYFIGFLGDELIFLDPH 281
Query: 256 TNQNIGCVYDKEQDSEKKLDSTYHCPQA-SRLHILHMDPSIAV 297
T Q D E++ D T+HC Q R++IL++DPS+A+
Sbjct: 282 TTQTF---VDTEENGMVD-DQTFHCLQPPQRMNILNLDPSVAL 320
>WB|WBGene00013595 [details] [associations]
symbol:atg-4.1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF03416
eggNOG:NOG239662 HOGENOM:HOG000007008 KO:K08342 InterPro:IPR005078
PANTHER:PTHR22624 GeneTree:ENSGT00530000063000 EMBL:AL110500
RefSeq:NP_493375.2 ProteinModelPortal:Q9NA30 SMR:Q9NA30
DIP:DIP-26265N IntAct:Q9NA30 MINT:MINT-1053134 STRING:Q9NA30
MEROPS:C54.008 PaxDb:Q9NA30 EnsemblMetazoa:Y87G2A.3 GeneID:190777
KEGG:cel:CELE_Y87G2A.3 UCSC:Y87G2A.3 CTD:190777 WormBase:Y87G2A.3
InParanoid:Q9NA30 OMA:ISIDNFP NextBio:946932 Uniprot:Q9NA30
Length = 454
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 113/255 (44%), Positives = 163/255 (63%)
Query: 6 KLSHQD-LEQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLH 64
++S +D +E +++ +TSR WFTYR+ F PIG +G +TD+GWGCMLRC QM++ + LL H
Sbjct: 43 EISKEDGIEAMKKYVTSRFWFTYRRDFSPIGGTGPSTDQGWGCMLRCAQMLLGEVLLRRH 102
Query: 65 LGRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 124
+GR ++W++ E Y KIL+MF D + A YSIHQIA G +EGK V +WFGPNT AQV+
Sbjct: 103 IGRHFEWDIEKTSEIYEKILQMFFDEKDALYSIHQIAQMGVTEGKEVSKWFGPNTAAQVM 162
Query: 125 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRASSNPQWQPLVLVIPLRLGIQDIN 184
+KL +DDWS+I HVALDN LV K+ T A+S P + L+ + G+ D N
Sbjct: 163 KKLTIFDDWSNIAVHVALDNILV----KEDAIT--MATSYPSEDAVKLI--MENGLVDKN 214
Query: 185 PVYI---NGIKKCYALPIS-PVYDMVKILSSTYNMQTPRYEFTFPQSLGVIGGKPNHALY 240
+ + N I + L + P+ + ++ Y + F PQ +G+IGG+PNHALY
Sbjct: 215 RLSLSPGNIIPEWRPLLLMIPLRLGLTTINPCYLSAIQEF-FKIPQCVGIIGGRPNHALY 273
Query: 241 FIGYVGNDVIFLDPH 255
F+G G+ + +LDPH
Sbjct: 274 FVGMSGSKLFYLDPH 288
>UNIPROTKB|Q9NA30 [details] [associations]
symbol:atg-4.1 "Protein ATG-4.1, isoform a" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF03416 eggNOG:NOG239662 HOGENOM:HOG000007008
KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
GeneTree:ENSGT00530000063000 EMBL:AL110500 RefSeq:NP_493375.2
ProteinModelPortal:Q9NA30 SMR:Q9NA30 DIP:DIP-26265N IntAct:Q9NA30
MINT:MINT-1053134 STRING:Q9NA30 MEROPS:C54.008 PaxDb:Q9NA30
EnsemblMetazoa:Y87G2A.3 GeneID:190777 KEGG:cel:CELE_Y87G2A.3
UCSC:Y87G2A.3 CTD:190777 WormBase:Y87G2A.3 InParanoid:Q9NA30
OMA:ISIDNFP NextBio:946932 Uniprot:Q9NA30
Length = 454
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 113/255 (44%), Positives = 163/255 (63%)
Query: 6 KLSHQD-LEQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLH 64
++S +D +E +++ +TSR WFTYR+ F PIG +G +TD+GWGCMLRC QM++ + LL H
Sbjct: 43 EISKEDGIEAMKKYVTSRFWFTYRRDFSPIGGTGPSTDQGWGCMLRCAQMLLGEVLLRRH 102
Query: 65 LGRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 124
+GR ++W++ E Y KIL+MF D + A YSIHQIA G +EGK V +WFGPNT AQV+
Sbjct: 103 IGRHFEWDIEKTSEIYEKILQMFFDEKDALYSIHQIAQMGVTEGKEVSKWFGPNTAAQVM 162
Query: 125 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRASSNPQWQPLVLVIPLRLGIQDIN 184
+KL +DDWS+I HVALDN LV K+ T A+S P + L+ + G+ D N
Sbjct: 163 KKLTIFDDWSNIAVHVALDNILV----KEDAIT--MATSYPSEDAVKLI--MENGLVDKN 214
Query: 185 PVYI---NGIKKCYALPIS-PVYDMVKILSSTYNMQTPRYEFTFPQSLGVIGGKPNHALY 240
+ + N I + L + P+ + ++ Y + F PQ +G+IGG+PNHALY
Sbjct: 215 RLSLSPGNIIPEWRPLLLMIPLRLGLTTINPCYLSAIQEF-FKIPQCVGIIGGRPNHALY 273
Query: 241 FIGYVGNDVIFLDPH 255
F+G G+ + +LDPH
Sbjct: 274 FVGMSGSKLFYLDPH 288
>UNIPROTKB|F8WD71 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 GO:GO:0045732 InterPro:IPR005078 PANTHER:PTHR22624
EMBL:AC133528 IPI:IPI00941681 HGNC:HGNC:20790 ChiTaRS:ATG4B
ProteinModelPortal:F8WD71 SMR:F8WD71 PRIDE:F8WD71
Ensembl:ENST00000396411 ArrayExpress:F8WD71 Bgee:F8WD71
Uniprot:F8WD71
Length = 319
Score = 364 (133.2 bits), Expect = 2.0e-51, Sum P(2) = 2.0e-51
Identities = 61/112 (54%), Positives = 87/112 (77%)
Query: 48 MLRCGQMVIAQALLFLHLGRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGAS 106
MLRCGQM+ AQAL+ HLGRDW+W ++ ++Y +L F DR+ + YSIHQIA G
Sbjct: 1 MLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVG 60
Query: 107 EGKAVGEWFGPNTVAQVLRKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 158
EGK++G+W+GPNTVAQVL+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 61 EGKSIGQWYGPNTVAQVLKKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 112
Score = 187 (70.9 bits), Expect = 2.0e-51, Sum P(2) = 2.0e-51
Identities = 43/90 (47%), Positives = 57/90 (63%)
Query: 209 LSSTYNMQTPRYEFTFPQSLGVIGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQ 268
++ Y ++T ++ F PQSLGVIGGKPN A YFIGYVG ++I+LDPHT Q V +
Sbjct: 161 INEAY-VETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQP--AV--EPT 215
Query: 269 DSEKKLDSTYHCPQAS-RLHILHMDPSIAV 297
D D ++HC R+ I +DPSIAV
Sbjct: 216 DGCFIPDESFHCQHPPCRMSIAELDPSIAV 245
Score = 113 (44.8 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 167 WQPLVLVIPLRLGIQDINPVYINGIKKCYALPIS 200
W+PLVL+IPLRLG+ DIN Y+ +K C+ +P S
Sbjct: 145 WRPLVLLIPLRLGLTDINEAYVETLKHCFMMPQS 178
>UNIPROTKB|F1PAF7 [details] [associations]
symbol:ATG4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0000045 "autophagic vacuole assembly"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] Pfam:PF03416 GO:GO:0005737 GO:GO:0015031
GO:GO:0000045 GO:GO:0008234 GO:GO:0006508 InterPro:IPR005078
PANTHER:PTHR22624 GeneTree:ENSGT00530000063000 EMBL:AAEX03014562
OMA:IPGALPM Ensembl:ENSCAFT00000020734 Uniprot:F1PAF7
Length = 319
Score = 354 (129.7 bits), Expect = 2.3e-50, Sum P(2) = 2.3e-50
Identities = 59/109 (54%), Positives = 84/109 (77%)
Query: 48 MLRCGQMVIAQALLFLHLGRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGAS 106
MLRCGQM+ AQAL+ HLGRDW+W ++ ++Y +L F DR+ + YSIHQIA G
Sbjct: 1 MLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFNVLNAFIDRKDSYYSIHQIAQMGVG 60
Query: 107 EGKAVGEWFGPNTVAQVLRKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 155
EGK++G+W+GPNTVAQVL+KLA +D WS++ H+A+DNT+V+ +++LC
Sbjct: 61 EGKSIGQWYGPNTVAQVLKKLAVFDTWSALAVHIAMDNTVVMEDIRRLC 109
Score = 187 (70.9 bits), Expect = 2.3e-50, Sum P(2) = 2.3e-50
Identities = 45/90 (50%), Positives = 58/90 (64%)
Query: 209 LSSTYNMQTPRYEFTFPQSLGVIGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQ 268
++ Y ++T + F PQSLGVIGGKPN A YFIGYVG ++I+LDPHT Q V +
Sbjct: 161 INEAY-VETLKRCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQP--AV--EFT 215
Query: 269 DSEKKLDSTYHCPQA-SRLHILHMDPSIAV 297
DS D ++HC SR+ I +DPSIAV
Sbjct: 216 DSCFIPDESFHCQHPPSRMSIGELDPSIAV 245
Score = 116 (45.9 bits), Expect = 6.7e-43, Sum P(2) = 6.7e-43
Identities = 19/34 (55%), Positives = 27/34 (79%)
Query: 167 WQPLVLVIPLRLGIQDINPVYINGIKKCYALPIS 200
W+PLVL+IPLRLG+ DIN Y+ +K+C+ +P S
Sbjct: 145 WRPLVLLIPLRLGLTDINEAYVETLKRCFMMPQS 178
>UNIPROTKB|K7GK67 [details] [associations]
symbol:LOC100156732 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0015031 "protein transport" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
InterPro:IPR005078 PANTHER:PTHR22624 GeneTree:ENSGT00530000063000
EMBL:CU463012 Ensembl:ENSSSCT00000033291 Uniprot:K7GK67
Length = 325
Score = 436 (158.5 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 94/232 (40%), Positives = 141/232 (60%)
Query: 68 DWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK 126
DW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL+K
Sbjct: 25 DWNWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKK 84
Query: 127 LAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRASSNPQWQPLVLVIPLRLGIQDINPV 186
LA +D+W+S+ +V++DNT+V+ +KK+C + S++ + L Q P
Sbjct: 85 LALFDEWNSLAVYVSMDNTVVIEDIKKMCCASA-LSADAAVESRR--DSLNASTQSKGPS 141
Query: 187 YINGIKKCYALPISPVYDMVKILSSTYNMQTPRYEFTFPQSLGVIGGKPNHALYFIGYVG 246
K L I P+ + ++ Y + + F PQSLG +GGKPN+A YFIG++G
Sbjct: 142 ACRPAWKPLLL-IVPLRLGINQINPVY-VDAFKECFKMPQSLGALGGKPNNAYYFIGFLG 199
Query: 247 NDVIFLDPHTNQNIGCVYDKEQDSEKKLDSTYHCPQA-SRLHILHMDPSIAV 297
+++IFLDPHT Q D E++ D T+HC Q R++IL++DPS+A+
Sbjct: 200 DELIFLDPHTTQTF---VDTEENGMVD-DQTFHCLQPPQRMNILNLDPSVAL 247
Score = 70 (29.7 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 12/17 (70%), Positives = 15/17 (88%)
Query: 18 DITSRLWFTYRKGFVPI 34
DI++RLWFTYR+ F PI
Sbjct: 8 DISARLWFTYRRKFSPI 24
>UNIPROTKB|C9JQ72 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 HOGENOM:HOG000007008 InterPro:IPR005078
PANTHER:PTHR22624 EMBL:AC133528 HGNC:HGNC:20790 ChiTaRS:ATG4B
IPI:IPI00894144 ProteinModelPortal:C9JQ72 SMR:C9JQ72 STRING:C9JQ72
Ensembl:ENST00000425239 ArrayExpress:C9JQ72 Bgee:C9JQ72
Uniprot:C9JQ72
Length = 266
Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
Identities = 80/142 (56%), Positives = 108/142 (76%)
Query: 13 EQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQWN 72
++I D+ SRLWFTYRK F IG +G T+D GWGCMLRCGQM+ AQAL+ HLGRDW+W
Sbjct: 40 DEILSDVASRLWFTYRKNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWT 99
Query: 73 VNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKYD 131
++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL+KLA +D
Sbjct: 100 QRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFD 159
Query: 132 DWSSIVFHVALDNTLVVNQVKK 153
WSS+ H+A+DNT+V+ ++ K
Sbjct: 160 TWSSLAVHIAMDNTVVMEEISK 181
>UNIPROTKB|F5H3G3 [details] [associations]
symbol:ATG4A "Cysteine protease ATG4A" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624 EMBL:AL031177
HGNC:HGNC:16489 IPI:IPI01014972 ProteinModelPortal:F5H3G3
SMR:F5H3G3 Ensembl:ENST00000545696 UCSC:uc011msl.2
ArrayExpress:F5H3G3 Bgee:F5H3G3 Uniprot:F5H3G3
Length = 259
Score = 355 (130.0 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
Identities = 61/109 (55%), Positives = 85/109 (77%)
Query: 48 MLRCGQMVIAQALLFLHLGRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGAS 106
MLRCGQM++AQAL+ HLGRDW W ++ + Y +IL+ F DR+ YSIHQ+A G
Sbjct: 1 MLRCGQMMLAQALICRHLGRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVG 60
Query: 107 EGKAVGEWFGPNTVAQVLRKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 155
EGK++GEWFGPNTVAQVL+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 61 EGKSIGEWFGPNTVAQVLKKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 109
Score = 111 (44.1 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
Identities = 27/74 (36%), Positives = 42/74 (56%)
Query: 225 PQSLGVIGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQDSEKKLDSTYHCPQA- 283
P S G +P +L +++IFLDPHT Q D E++ D T+HC Q+
Sbjct: 113 PLSADTAGDRPPDSLTASNQ-SDELIFLDPHTTQTF---VDTEENGTVN-DQTFHCLQSP 167
Query: 284 SRLHILHMDPSIAV 297
R++IL++DPS+A+
Sbjct: 168 QRMNILNLDPSVAL 181
>DICTYBASE|DDB_G0283753 [details] [associations]
symbol:DDB_G0283753 species:44689 "Dictyostelium
discoideum" [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0006914 "autophagy"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
dictyBase:DDB_G0283753 Pfam:PF03416 GO:GO:0005737 EMBL:AAFI02000056
GO:GO:0015031 GO:GO:0006914 GO:GO:0008234 GO:GO:0006508
eggNOG:NOG239662 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
ProtClustDB:CLSZ2431228 RefSeq:XP_638996.1
ProteinModelPortal:Q54QM7 MEROPS:C54.A09 EnsemblProtists:DDB0218520
GeneID:8624242 KEGG:ddi:DDB_G0283753 InParanoid:Q54QM7 OMA:RTHVSEV
Uniprot:Q54QM7
Length = 551
Score = 305 (112.4 bits), Expect = 3.7e-41, Sum P(2) = 3.7e-41
Identities = 63/160 (39%), Positives = 97/160 (60%)
Query: 12 LEQIRRDITSR-LWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQ 70
+++ D T+R LWFTYR+GF I D+ D GWGCMLR GQM+++ LL LG +W+
Sbjct: 140 IKEFLNDFTTRVLWFTYRQGFPCIDDTMYDNDCGWGCMLRSGQMLLSNVLLHNILGDEWK 199
Query: 71 WNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAK- 129
S + I+ MF D+ +AP+SIH IA+ G + GK +GEWF P+ ++Q ++ L
Sbjct: 200 ---RSSSATHPDIISMFLDKPSAPFSIHNIAMEGQNLGKNIGEWFAPSIISQTIKILVSR 256
Query: 130 -YDDWSSIVFHVALDNTLVVNQVKKLCTTNKRASSNPQWQ 168
YD + VF ++ D +L ++Q+ + + K+ SS Q Q
Sbjct: 257 NYDQCNISVF-ISEDGSLYIDQLLNISSKKKKTSSTEQQQ 295
Score = 160 (61.4 bits), Expect = 3.7e-41, Sum P(2) = 3.7e-41
Identities = 36/89 (40%), Positives = 52/89 (58%)
Query: 209 LSSTYNMQTPRYEFTFPQSLGVIGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQ 268
L+S Y+ F FPQ+LGV+GGKP +LYFI +++ +LDPHT QN + E
Sbjct: 399 LNSIYHSSLLEI-FKFPQNLGVVGGKPRASLYFIAAQDDNLFYLDPHTVQNH---IEVEN 454
Query: 269 DSEKKLDSTYHCPQASRLHILHMDPSIAV 297
S+ L+ T+ C R H+ +DPS+ V
Sbjct: 455 GSKFPLN-TFFCSTTKRTHVSEVDPSLVV 482
>UNIPROTKB|Q86TL0 [details] [associations]
symbol:ATG4D "Cysteine protease ATG4D" species:9606 "Homo
sapiens" [GO:0006508 "proteolysis" evidence=IEA] [GO:0006914
"autophagy" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0006508
GO:GO:0004197 eggNOG:NOG239662 KO:K08342 InterPro:IPR005078
PANTHER:PTHR22624 HOGENOM:HOG000294192 HOVERGEN:HBG050537
EMBL:AJ312332 EMBL:BC068992 IPI:IPI00328573 RefSeq:NP_116274.3
UniGene:Hs.512799 ProteinModelPortal:Q86TL0 SMR:Q86TL0
STRING:Q86TL0 MEROPS:C54.005 PhosphoSite:Q86TL0 DMDM:61211809
PRIDE:Q86TL0 DNASU:84971 Ensembl:ENST00000309469 GeneID:84971
KEGG:hsa:84971 UCSC:uc002mov.3 CTD:84971 GeneCards:GC19P010654
HGNC:HGNC:20789 MIM:611340 neXtProt:NX_Q86TL0 PharmGKB:PA134907475
InParanoid:Q86TL0 OMA:YGWAVKS OrthoDB:EOG45MN5B GenomeRNAi:84971
NextBio:75518 ArrayExpress:Q86TL0 Bgee:Q86TL0 CleanEx:HS_ATG4D
Genevestigator:Q86TL0 GermOnline:ENSG00000130734 Uniprot:Q86TL0
Length = 474
Score = 200 (75.5 bits), Expect = 5.3e-41, Sum P(3) = 5.3e-41
Identities = 39/119 (32%), Positives = 70/119 (58%)
Query: 76 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKY-DDWS 134
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + D +
Sbjct: 208 QERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESCSDVT 267
Query: 135 SIVFHVALDNTLVVNQVKKLCTTNKRASSNPQWQPLVLVIPLRLGIQDINPVYINGIKK 193
+V +V+ D T+ V +L R +W+ +V+++P+RLG + +NPVY+ +K+
Sbjct: 268 RLVVYVSQDCTVYKADVARLVA---RPDPTAEWKSVVILVPVRLGGETLNPVYVPCVKE 323
Score = 196 (74.1 bits), Expect = 5.3e-41, Sum P(3) = 5.3e-41
Identities = 34/61 (55%), Positives = 43/61 (70%)
Query: 11 DLEQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQ 70
D+++ +RD SRLW TYR+ F P+ LT+D GWGCMLR GQM++AQ LL L RDW
Sbjct: 108 DIQRFQRDFVSRLWLTYRRDFPPLPGGCLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDWT 167
Query: 71 W 71
W
Sbjct: 168 W 168
Score = 133 (51.9 bits), Expect = 5.3e-41, Sum P(3) = 5.3e-41
Identities = 29/70 (41%), Positives = 42/70 (60%)
Query: 228 LGVIGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQDSEKKLDSTYHCPQASRLH 287
LG++GGKP H+LYFIGY + +++LDPH Q D Q ++ L+S +HC ++
Sbjct: 331 LGIMGGKPRHSLYFIGYQDDFLLYLDPHYCQP---TVDVSQ-ADFPLES-FHCTSPRKMA 385
Query: 288 ILHMDPSIAV 297
MDPS V
Sbjct: 386 FAKMDPSCTV 395
>MGI|MGI:2444308 [details] [associations]
symbol:Atg4d "autophagy related 4D, cysteine peptidase"
species:10090 "Mus musculus" [GO:0004197 "cysteine-type
endopeptidase activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0006914 "autophagy" evidence=ISS]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] MGI:MGI:2444308 Pfam:PF03416 GO:GO:0005737
GO:GO:0015031 GO:GO:0006914 GO:GO:0006508 GO:GO:0004197
eggNOG:NOG239662 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
GeneTree:ENSGT00530000063000 HOGENOM:HOG000294192
HOVERGEN:HBG050537 MEROPS:C54.005 CTD:84971 OMA:YGWAVKS
OrthoDB:EOG45MN5B EMBL:AJ312333 EMBL:AK036571 EMBL:AK081605
EMBL:AK081002 EMBL:BC030861 EMBL:BC069851 IPI:IPI00387190
RefSeq:NP_705811.8 UniGene:Mm.440165 ProteinModelPortal:Q8BGV9
SMR:Q8BGV9 PhosphoSite:Q8BGV9 PRIDE:Q8BGV9
Ensembl:ENSMUST00000065005 GeneID:235040 KEGG:mmu:235040
UCSC:uc009okt.1 InParanoid:Q8BGV9 NextBio:382473 Bgee:Q8BGV9
CleanEx:MM_ATG4D Genevestigator:Q8BGV9
GermOnline:ENSMUSG00000002820 Uniprot:Q8BGV9
Length = 474
Score = 203 (76.5 bits), Expect = 7.4e-41, Sum P(3) = 7.4e-41
Identities = 34/61 (55%), Positives = 44/61 (72%)
Query: 11 DLEQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQ 70
D+++ +RD SRLW TYR+ F P+ LT+D GWGCMLR GQM++AQ LL L RDW+
Sbjct: 108 DIQRFQRDFVSRLWLTYRRDFPPLAGGSLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDWR 167
Query: 71 W 71
W
Sbjct: 168 W 168
Score = 190 (71.9 bits), Expect = 7.4e-41, Sum P(3) = 7.4e-41
Identities = 37/113 (32%), Positives = 67/113 (59%)
Query: 82 KILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKY-DDWSSIVFHV 140
+I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + S +V +V
Sbjct: 214 RIVSWFADHPRAPFGLHRLVELGRSSGKKAGDWYGPSVVAHILRKAVESCSEVSRLVVYV 273
Query: 141 ALDNTLVVNQVKKLCTTNKRASSNPQWQPLVLVIPLRLGIQDINPVYINGIKK 193
+ D T+ V +L + +W+ +V+++P+RLG + +NPVY+ +K+
Sbjct: 274 SQDCTVYKADVARLLSW---PDPTAEWKSVVILVPVRLGGETLNPVYVPCVKE 323
Score = 133 (51.9 bits), Expect = 7.4e-41, Sum P(3) = 7.4e-41
Identities = 30/70 (42%), Positives = 41/70 (58%)
Query: 228 LGVIGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQDSEKKLDSTYHCPQASRLH 287
LG++GGKP H+LYFIGY + +++LDPH Q D Q S L+S +HC ++
Sbjct: 331 LGIMGGKPRHSLYFIGYQDDFLLYLDPHYCQP---TVDVSQPSFP-LES-FHCTSPRKMA 385
Query: 288 ILHMDPSIAV 297
MDPS V
Sbjct: 386 FAKMDPSCTV 395
>UNIPROTKB|F1S3M2 [details] [associations]
symbol:ATG4D "Cysteine protease ATG4D" species:9823 "Sus
scrofa" [GO:0015031 "protein transport" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0006914
"autophagy" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416 GO:GO:0005737
GO:GO:0015031 GO:GO:0006914 GO:GO:0008234 GO:GO:0006508
InterPro:IPR005078 PANTHER:PTHR22624 GeneTree:ENSGT00530000063000
OMA:YGWAVKS EMBL:CU993813 Ensembl:ENSSSCT00000014905 Uniprot:F1S3M2
Length = 469
Score = 199 (75.1 bits), Expect = 7.6e-41, Sum P(3) = 7.6e-41
Identities = 34/62 (54%), Positives = 44/62 (70%)
Query: 11 DLEQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQ 70
D+++ +RD SRLW TYR+ F P+ LT+D GWGCMLR GQM++AQ LL L RDW
Sbjct: 107 DIQRFQRDFVSRLWLTYRRDFPPLAGGCLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDWT 166
Query: 71 WN 72
W+
Sbjct: 167 WS 168
Score = 196 (74.1 bits), Expect = 7.6e-41, Sum P(3) = 7.6e-41
Identities = 38/119 (31%), Positives = 70/119 (58%)
Query: 76 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKY-DDWS 134
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 203 QERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESCSEVT 262
Query: 135 SIVFHVALDNTLVVNQVKKLCTTNKRASSNPQWQPLVLVIPLRLGIQDINPVYINGIKK 193
+V +V+ D T+ V +L R +W+ +V+++P+RLG + +NPVY+ +K+
Sbjct: 263 RLVVYVSQDCTVYKADVARLVA---RPDPTAEWKAVVILVPVRLGGETLNPVYVPCVKE 318
Score = 133 (51.9 bits), Expect = 7.6e-41, Sum P(3) = 7.6e-41
Identities = 29/70 (41%), Positives = 42/70 (60%)
Query: 228 LGVIGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQDSEKKLDSTYHCPQASRLH 287
LG++GGKP H+LYFIGY + +++LDPH Q D Q ++ L+S +HC ++
Sbjct: 326 LGIMGGKPRHSLYFIGYQDDFLLYLDPHYCQP---TVDVSQ-ADFPLES-FHCTSPRKMA 380
Query: 288 ILHMDPSIAV 297
MDPS V
Sbjct: 381 FTKMDPSCTV 390
>UNIPROTKB|Q684M2 [details] [associations]
symbol:ATG4D "Cysteine protease ATG4D" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] Pfam:PF03416 GO:GO:0005737
GO:GO:0015031 GO:GO:0006914 GO:GO:0008234 GO:GO:0006508
eggNOG:NOG239662 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
HOGENOM:HOG000294192 HOVERGEN:HBG050537 MEROPS:C54.005 CTD:84971
OrthoDB:EOG45MN5B EMBL:AJ632303 RefSeq:NP_001116551.1
UniGene:Ssc.6142 ProteinModelPortal:Q684M2 GeneID:100141400
KEGG:ssc:100141400 Uniprot:Q684M2
Length = 469
Score = 199 (75.1 bits), Expect = 7.6e-41, Sum P(3) = 7.6e-41
Identities = 34/62 (54%), Positives = 44/62 (70%)
Query: 11 DLEQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQ 70
D+++ +RD SRLW TYR+ F P+ LT+D GWGCMLR GQM++AQ LL L RDW
Sbjct: 107 DIQRFQRDFVSRLWLTYRRDFPPLAGGCLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDWT 166
Query: 71 WN 72
W+
Sbjct: 167 WS 168
Score = 196 (74.1 bits), Expect = 7.6e-41, Sum P(3) = 7.6e-41
Identities = 38/119 (31%), Positives = 70/119 (58%)
Query: 76 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKY-DDWS 134
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 203 QERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESCSEVT 262
Query: 135 SIVFHVALDNTLVVNQVKKLCTTNKRASSNPQWQPLVLVIPLRLGIQDINPVYINGIKK 193
+V +V+ D T+ V +L R +W+ +V+++P+RLG + +NPVY+ +K+
Sbjct: 263 RLVVYVSQDCTVYKADVARLVA---RPDPTAEWKAVVILVPVRLGGETLNPVYVPCVKE 318
Score = 133 (51.9 bits), Expect = 7.6e-41, Sum P(3) = 7.6e-41
Identities = 29/70 (41%), Positives = 42/70 (60%)
Query: 228 LGVIGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQDSEKKLDSTYHCPQASRLH 287
LG++GGKP H+LYFIGY + +++LDPH Q D Q ++ L+S +HC ++
Sbjct: 326 LGIMGGKPRHSLYFIGYQDDFLLYLDPHYCQP---TVDVSQ-ADFPLES-FHCTSPRKMA 380
Query: 288 ILHMDPSIAV 297
MDPS V
Sbjct: 381 FTKMDPSCTV 390
>UNIPROTKB|F1N5L1 [details] [associations]
symbol:ATG4D "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0015031 "protein transport" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0006914
"autophagy" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416 GO:GO:0005737
GO:GO:0015031 GO:GO:0006914 GO:GO:0008234 GO:GO:0006508
InterPro:IPR005078 PANTHER:PTHR22624 GeneTree:ENSGT00530000063000
OMA:YGWAVKS EMBL:DAAA02019466 UniGene:Bt.30691 IPI:IPI00854526
Ensembl:ENSBTAT00000014200 ArrayExpress:F1N5L1 Uniprot:F1N5L1
Length = 472
Score = 201 (75.8 bits), Expect = 9.6e-41, Sum P(3) = 9.6e-41
Identities = 34/61 (55%), Positives = 43/61 (70%)
Query: 11 DLEQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQ 70
D+++ +RD SRLW TYR+ F P+ LT+D GWGCMLR GQM++AQ LL L RDW
Sbjct: 107 DIQRFQRDFVSRLWLTYRRDFPPLAGGSLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDWT 166
Query: 71 W 71
W
Sbjct: 167 W 167
Score = 192 (72.6 bits), Expect = 9.6e-41, Sum P(3) = 9.6e-41
Identities = 37/119 (31%), Positives = 69/119 (57%)
Query: 76 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKY-DDWS 134
+E + +I+ F D AP+ +H++ G GK G+W+GP+ VA +LRK + + +
Sbjct: 206 QERRHRQIVSWFADHPRAPFGLHRLVELGQGSGKKAGDWYGPSLVAHILRKAVESCSEVT 265
Query: 135 SIVFHVALDNTLVVNQVKKLCTTNKRASSNPQWQPLVLVIPLRLGIQDINPVYINGIKK 193
+V +V+ D T+ V +L R +W+ +V+++P+RLG + +NPVY+ +K+
Sbjct: 266 RLVVYVSQDCTVYKADVARLVA---RPDPTAEWKSVVILVPVRLGGETLNPVYVPCVKE 321
Score = 133 (51.9 bits), Expect = 9.6e-41, Sum P(3) = 9.6e-41
Identities = 29/70 (41%), Positives = 42/70 (60%)
Query: 228 LGVIGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQDSEKKLDSTYHCPQASRLH 287
LG++GGKP H+LYFIGY + +++LDPH Q D Q ++ L+S +HC ++
Sbjct: 329 LGIMGGKPRHSLYFIGYQDDFLLYLDPHYCQP---TVDVSQ-ADFPLES-FHCTSPRKMA 383
Query: 288 ILHMDPSIAV 297
MDPS V
Sbjct: 384 FAKMDPSCTV 393
>UNIPROTKB|E2RDP2 [details] [associations]
symbol:ATG4D "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015031 "protein transport" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
GeneTree:ENSGT00530000063000 CTD:84971 OMA:YGWAVKS
EMBL:AAEX03012418 RefSeq:XP_542069.1 ProteinModelPortal:E2RDP2
Ensembl:ENSCAFT00000028187 GeneID:484953 KEGG:cfa:484953
NextBio:20859019 Uniprot:E2RDP2
Length = 473
Score = 198 (74.8 bits), Expect = 1.1e-40, Sum P(3) = 1.1e-40
Identities = 34/61 (55%), Positives = 43/61 (70%)
Query: 11 DLEQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQ 70
D+++ +RD SRLW TYR+ F P+ LT+D GWGCMLR GQM++AQ LL L RDW
Sbjct: 107 DIQRFQRDFVSRLWLTYRRDFPPLAGGCLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDWT 166
Query: 71 W 71
W
Sbjct: 167 W 167
Score = 196 (74.1 bits), Expect = 1.1e-40, Sum P(3) = 1.1e-40
Identities = 38/119 (31%), Positives = 70/119 (58%)
Query: 76 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKY-DDWS 134
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 207 QERRHRQIVSWFADHPQAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESCSEIT 266
Query: 135 SIVFHVALDNTLVVNQVKKLCTTNKRASSNPQWQPLVLVIPLRLGIQDINPVYINGIKK 193
+V +V+ D T+ V +L R +W+ +V+++P+RLG + +NPVY+ +K+
Sbjct: 267 RLVVYVSQDCTVYKADVARLVA---RPDPTAEWKSVVILVPVRLGGETLNPVYVPCVKE 322
Score = 133 (51.9 bits), Expect = 1.1e-40, Sum P(3) = 1.1e-40
Identities = 29/70 (41%), Positives = 42/70 (60%)
Query: 228 LGVIGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQDSEKKLDSTYHCPQASRLH 287
LG++GGKP H+LYFIGY + +++LDPH Q D Q ++ L+S +HC ++
Sbjct: 330 LGIMGGKPRHSLYFIGYQDDFLLYLDPHYCQP---TVDVSQ-ADFPLES-FHCTSPRKMA 384
Query: 288 ILHMDPSIAV 297
MDPS V
Sbjct: 385 FAKMDPSCTV 394
>UNIPROTKB|K7GPU1 [details] [associations]
symbol:LOC100156732 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0015031 "protein transport" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
InterPro:IPR005078 PANTHER:PTHR22624 GeneTree:ENSGT00530000063000
EMBL:CU463012 Ensembl:ENSSSCT00000033275 Uniprot:K7GPU1
Length = 278
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 93/231 (40%), Positives = 140/231 (60%)
Query: 69 WQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL 127
W W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL+KL
Sbjct: 2 WNWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKL 61
Query: 128 AKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRASSNPQWQPLVLVIPLRLGIQDINPVY 187
A +D+W+S+ +V++DNT+V+ +KK+C + S++ + L Q P
Sbjct: 62 ALFDEWNSLAVYVSMDNTVVIEDIKKMCCASA-LSADAAVESRR--DSLNASTQSKGPSA 118
Query: 188 INGIKKCYALPISPVYDMVKILSSTYNMQTPRYEFTFPQSLGVIGGKPNHALYFIGYVGN 247
K L I P+ + ++ Y + + F PQSLG +GGKPN+A YFIG++G+
Sbjct: 119 CRPAWKPLLL-IVPLRLGINQINPVY-VDAFKECFKMPQSLGALGGKPNNAYYFIGFLGD 176
Query: 248 DVIFLDPHTNQNIGCVYDKEQDSEKKLDSTYHCPQA-SRLHILHMDPSIAV 297
++IFLDPHT Q D E++ D T+HC Q R++IL++DPS+A+
Sbjct: 177 ELIFLDPHTTQTF---VDTEENGMVD-DQTFHCLQPPQRMNILNLDPSVAL 223
>TAIR|locus:2080447 [details] [associations]
symbol:AT3G59950 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006914 "autophagy"
evidence=ISS] [GO:0008233 "peptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM] UniProt:Q9M1Y0 Pfam:PF03416
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0015031 GO:GO:0005776
GO:GO:0006914 GO:GO:0006508 GO:GO:0005775 EMBL:AL138647 HSSP:Q9Y4P1
eggNOG:NOG239662 HOGENOM:HOG000007008 ProtClustDB:CLSN2685022
GO:GO:0019786 GO:GO:0016807 InterPro:IPR005078 PANTHER:PTHR22624
EMBL:AB073172 EMBL:AK226932 EMBL:AK220621 IPI:IPI00519628
IPI:IPI00846196 PIR:T47819 RefSeq:NP_001118859.1 RefSeq:NP_191554.1
UniGene:At.1165 UniGene:At.48785 ProteinModelPortal:Q9M1Y0
SMR:Q9M1Y0 STRING:Q9M1Y0 MEROPS:C54.A02 PaxDb:Q9M1Y0 PRIDE:Q9M1Y0
EnsemblPlants:AT3G59950.1 GeneID:825165 KEGG:ath:AT3G59950
TAIR:At3g59950 InParanoid:Q9M1Y0 OMA:HRMKIMN PhylomeDB:Q9M1Y0
Genevestigator:Q9M1Y0
Length = 477
Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
Identities = 106/302 (35%), Positives = 151/302 (50%)
Query: 12 LEQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQW 71
L R+D +S + TYR+GF PIGD+ T+D WGCMLR GQM+ AQALLF LGR W+
Sbjct: 138 LAAFRQDFSSLILMTYRRGFEPIGDTTYTSDVNWGCMLRSGQMLFAQALLFQRLGRSWRK 197
Query: 72 NVNSK-EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLA-- 128
+ +E YL+IL++F D + +SIH + L G S G A G W GP V + LA
Sbjct: 198 KDSEPADEKYLEILELFGDTEASAFSIHNLILAGESYGLAAGSWVGPYAVCRSWESLARK 257
Query: 129 -------KYDDWSSIVFHVALDNTLVVNQVKKLC------TTNKRASSNPQWQPLVLVIP 175
K+ +S V V+ LC T + + +W P++L++P
Sbjct: 258 NKEETDDKHKSFSMAVHIVSGSEDGERGGAPILCIEDVTKTCLEFSEGETEWPPILLLVP 317
Query: 176 LRLGIQDINPVYINGIKKCYALPISPVYDMVKILSSTYNMQTPRYEFTFPQSLGVIGGKP 235
L LG+ +NP YI L +T FTFPQSLG++GGKP
Sbjct: 318 LVLGLDRVNPRYIPS------------------LIAT---------FTFPQSLGILGGKP 350
Query: 236 NHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQDSEKKLDSTYHCPQASRLHILHMDPSI 295
+ Y +G + +LDPH Q + V + QD + S+YHC + + +DPS+
Sbjct: 351 GASTYIVGVQEDKGFYLDPHDVQQVVTVKKENQDVDT---SSYHCNTLRYVPLESLDPSL 407
Query: 296 AV 297
A+
Sbjct: 408 AL 409
>UNIPROTKB|F1LX10 [details] [associations]
symbol:F1LX10 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006914 "autophagy"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
Pfam:PF03416 GO:GO:0005737 GO:GO:0015031 GO:GO:0006914
GO:GO:0008234 GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624
IPI:IPI00566476 Ensembl:ENSRNOT00000049323 Uniprot:F1LX10
Length = 309
Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
Identities = 80/193 (41%), Positives = 117/193 (60%)
Query: 14 QIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQWNV 73
+I DI SR TY + F IG +G + GWGCML+CGQM+ QA + HLG+DW+W
Sbjct: 26 EILSDIASRRCLTYMRNFSAIGGTGPASVTGWGCMLQCGQMIFVQAPVCWHLGQDWRW-- 83
Query: 74 NSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKYDDW 133
++ + L +L F DR+ YSIHQIA G +EGK++G+W+G NTV QVL+KLA +D W
Sbjct: 84 -TQWKRLLNVLNAFLDRKDRYYSIHQIAQMGVNEGKSIGKWYGTNTVGQVLKKLAVFDTW 142
Query: 134 SSIVFHVALDN--TLVVNQVKKLCT---TNKRASSNPQ-WQPLVLVIPLRLGIQDINPVY 187
S + HV L++ + +++ C + P W+PLVL+IPL + +I VY
Sbjct: 143 SFLAIHVTLESGAAALPTDLERHCNGLPAGTEVTIRPSAWRPLVLLIPLHR-LTNIKEVY 201
Query: 188 INGIKKCYALPIS 200
+ +K C+ +P S
Sbjct: 202 VETLKHCFMMPQS 214
Score = 146 (56.5 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 201 PVYDMVKILSSTYNMQTPRYEFTFPQSLGVIGGKPNHALYFIGYVGNDVIFLDPHTNQN 259
P++ + I Y ++T ++ F PQSLGVIGGKPN A Y IGYVG +++ LDPH+ Q+
Sbjct: 190 PLHRLTNI-KEVY-VETLKHCFMMPQSLGVIGGKPNSACYIIGYVGEELVCLDPHSLQS 246
>ASPGD|ASPL0000035892 [details] [associations]
symbol:AN3470 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=IEA] [GO:0032258 "CVT pathway" evidence=IEA] [GO:0006501
"C-terminal protein lipidation" evidence=IEA] [GO:0006612 "protein
targeting to membrane" evidence=IEA] [GO:0000422 "mitochondrion
degradation" evidence=IEA] [GO:0034727 "piecemeal microautophagy of
nucleus" evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0051697 "protein delipidation"
evidence=IEA] [GO:0016485 "protein processing" evidence=IEA]
[GO:0000045 "autophagic vacuole assembly" evidence=IEA]
Pfam:PF03416 GO:GO:0005737 GO:GO:0015031 GO:GO:0006914
GO:GO:0008234 GO:GO:0006508 EMBL:BN001306 eggNOG:NOG239662
KO:K08342 OMA:PYRESST InterPro:IPR005078 PANTHER:PTHR22624
EMBL:AACD01000058 RefSeq:XP_661074.1 STRING:Q5B7L0 MEROPS:C54.006
GeneID:2874196 KEGG:ani:AN3470.2 HOGENOM:HOG000034155
OrthoDB:EOG470XRS Uniprot:Q5B7L0
Length = 402
Score = 283 (104.7 bits), Expect = 1.3e-36, Sum P(2) = 1.3e-36
Identities = 66/168 (39%), Positives = 95/168 (56%)
Query: 34 IGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQWNVNSKEEAYLKILKMFEDRRTA 93
I G T+D GWGCM+R GQ ++A ++ L LGRDW+ +EE K+L +F D A
Sbjct: 115 IDAQGFTSDTGWGCMIRSGQSLLANSMAILLLGRDWRRGERLEEEG--KLLSLFADSPHA 172
Query: 94 PYSIHQIALTGASE-GKAVGEWFGPNTVAQVLRKLAKYDDWSSIVFHVALDNTLVVNQVK 152
P+SIH GA GK GEWFGP A+ ++ LA D S++ ++A DN+ V+Q K
Sbjct: 173 PFSIHSFVKHGADFCGKHPGEWFGPTATARCIQGLAARYDQSNLQVYIADDNS-DVHQDK 231
Query: 153 KLCTTNKRASSNPQWQPLVLVIPLRLGIQDINPVYINGIKKCYALPIS 200
+ + + +P ++++ LRLGI I VY NG+K LP S
Sbjct: 232 FMSVSRDEKGTV---RPTLILLGLRLGIDRITAVYWNGLKAVLQLPQS 276
Score = 127 (49.8 bits), Expect = 1.3e-36, Sum P(2) = 1.3e-36
Identities = 26/73 (35%), Positives = 41/73 (56%)
Query: 225 PQSLGVIGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQDSEKKLDSTYHCPQAS 284
PQS+G+ GG+P+ + YF+ G+ +LDPH N Y + + +TYH +
Sbjct: 274 PQSVGIAGGRPSASHYFVAVQGSHFFYLDPH-NTRPALRYSESGTYTEDEVNTYHTRRLR 332
Query: 285 RLHILHMDPSIAV 297
RL+I MDPS+ +
Sbjct: 333 RLNIQDMDPSMLI 345
Score = 59 (25.8 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 18 DITSRLWFTYRKGFVPIG-DSGL--TTDKGWGCMLRCGQMVIAQ 58
D S++W TYR F PI D+G + G LR Q++ AQ
Sbjct: 76 DFESKIWMTYRSNFPPIPKDAGQEGSLSLTLGVRLR-SQLIDAQ 118
>UNIPROTKB|Q523C3 [details] [associations]
symbol:ATG4 "Cysteine protease ATG4" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] Pfam:PF03416 GO:GO:0005737 GO:GO:0015031 GO:GO:0006914
GO:GO:0008234 GO:GO:0006508 EMBL:CM001234 eggNOG:NOG239662
KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624 OrthoDB:EOG470XRS
RefSeq:XP_003716330.1 STRING:Q523C3 EnsemblFungi:MGG_03580T0
GeneID:2676731 KEGG:mgr:MGG_03580 Uniprot:Q523C3
Length = 491
Score = 255 (94.8 bits), Expect = 4.7e-36, Sum P(3) = 4.7e-36
Identities = 63/182 (34%), Positives = 92/182 (50%)
Query: 20 TSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQWNVNSKEEA 79
+SR+ F R + +G TTD GWGCM+R GQ ++A +LL LGR W+ EE
Sbjct: 179 SSRMSFAMRLKTMADQQAGFTTDSGWGCMIRTGQSLLANSLLTCRLGRSWRRGQAPDEER 238
Query: 80 YLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVLRKLAKYDDWSSIVF 138
K+L +F D APYSIH GA++ GK GEWFGP+ A+ + LA + S V+
Sbjct: 239 --KLLSLFADDPRAPYSIHNFVAHGAAKCGKYPGEWFGPSATARCIHALANATENSFRVY 296
Query: 139 HVALDNTLVVNQVKKLCTTNKRASSNPQWQPLVLVIPLRLGIQDINPVYINGIKKCYALP 198
+ + ++ + + + P +++I RLGI IN VY + LP
Sbjct: 297 STGDLPDVYEDSFMEVAKPDGKT-----FHPTLILISTRLGIDKINQVYWESLTATLQLP 351
Query: 199 IS 200
S
Sbjct: 352 QS 353
Score = 113 (44.8 bits), Expect = 4.7e-36, Sum P(3) = 4.7e-36
Identities = 28/80 (35%), Positives = 44/80 (55%)
Query: 225 PQSLGVIGGKPNHALYFIGYVGND------VIFLDPH-TNQNIGCVYDKEQDSEKKLDST 277
PQS+G+ GG+P+ + YF+G +D + +LDPH T + D + + +DS
Sbjct: 351 PQSVGIAGGRPSSSHYFVGAQRSDEDQGSYLFYLDPHHTRPALPFHEDPQLYTPSDVDSC 410
Query: 278 YHCPQASRLHILHMDPSIAV 297
H + RLHI MDPS+ +
Sbjct: 411 -HTRRLRRLHIREMDPSMLI 429
Score = 65 (27.9 bits), Expect = 4.7e-36, Sum P(3) = 4.7e-36
Identities = 11/17 (64%), Positives = 12/17 (70%)
Query: 18 DITSRLWFTYRKGFVPI 34
D SR+W TYR GF PI
Sbjct: 154 DFESRIWMTYRSGFEPI 170
>UNIPROTKB|C9JIK8 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 HOGENOM:HOG000007008 InterPro:IPR005078
PANTHER:PTHR22624 EMBL:AC133528 HGNC:HGNC:20790 ChiTaRS:ATG4B
IPI:IPI00894238 ProteinModelPortal:C9JIK8 SMR:C9JIK8 STRING:C9JIK8
Ensembl:ENST00000400771 ArrayExpress:C9JIK8 Bgee:C9JIK8
Uniprot:C9JIK8
Length = 219
Score = 287 (106.1 bits), Expect = 1.5e-35, Sum P(2) = 1.5e-35
Identities = 50/89 (56%), Positives = 65/89 (73%)
Query: 13 EQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQWN 72
++I D+ SRLWFTYRK F IG +G T+D GWGCMLRCGQM+ AQAL+ HLGRDW+W
Sbjct: 40 DEILSDVASRLWFTYRKNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWT 99
Query: 73 VNSKE-EAYLKILKMFEDRRTAPYSIHQI 100
++ ++Y +L F DR+ + YSIHQI
Sbjct: 100 QRKRQPDSYFSVLNAFIDRKDSYYSIHQI 128
Score = 113 (44.8 bits), Expect = 1.5e-35, Sum P(2) = 1.5e-35
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 167 WQPLVLVIPLRLGIQDINPVYINGIKKCYALPIS 200
W+PLVL+IPLRLG+ DIN Y+ +K C+ +P S
Sbjct: 168 WRPLVLLIPLRLGLTDINEAYVETLKHCFMMPQS 201
Score = 109 (43.4 bits), Expect = 3.9e-35, Sum P(2) = 3.9e-35
Identities = 22/37 (59%), Positives = 28/37 (75%)
Query: 209 LSSTYNMQTPRYEFTFPQSLGVIGGKPNHALYFIGYV 245
++ Y ++T ++ F PQSLGVIGGKPN A YFIGYV
Sbjct: 184 INEAY-VETLKHCFMMPQSLGVIGGKPNSAHYFIGYV 219
>UNIPROTKB|K7GM02 [details] [associations]
symbol:LOC100156732 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0015031 "protein transport" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
InterPro:IPR005078 PANTHER:PTHR22624 GeneTree:ENSGT00530000063000
EMBL:CU463012 Ensembl:ENSSSCT00000035338 Uniprot:K7GM02
Length = 159
Score = 202 (76.2 bits), Expect = 1.8e-35, Sum P(3) = 1.8e-35
Identities = 41/82 (50%), Positives = 57/82 (69%)
Query: 218 PRYE-FTFPQSLGVIGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQDSEKKLDS 276
P E F PQSLG +GGKPN+A YFIG++G+++IFLDPHT Q D E++ D
Sbjct: 63 PNTECFKMPQSLGALGGKPNNAYYFIGFLGDELIFLDPHTTQTF---VDTEENGMVD-DQ 118
Query: 277 TYHCPQA-SRLHILHMDPSIAV 297
T+HC Q R++IL++DPS+A+
Sbjct: 119 TFHCLQPPQRMNILNLDPSVAL 140
Score = 155 (59.6 bits), Expect = 1.8e-35, Sum P(3) = 1.8e-35
Identities = 27/53 (50%), Positives = 36/53 (67%)
Query: 68 DWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNT 119
DW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNT
Sbjct: 13 DWNWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNT 65
Score = 53 (23.7 bits), Expect = 1.8e-35, Sum P(3) = 1.8e-35
Identities = 9/12 (75%), Positives = 10/12 (83%)
Query: 23 LWFTYRKGFVPI 34
LWFTYR+ F PI
Sbjct: 1 LWFTYRRKFSPI 12
>UNIPROTKB|F1P1T4 [details] [associations]
symbol:F1P1T4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006914
"autophagy" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624
GeneTree:ENSGT00530000063000 EMBL:AADN02013576 EMBL:AADN02013577
EMBL:AADN02013578 IPI:IPI01017240 Ensembl:ENSGALT00000013477
Uniprot:F1P1T4
Length = 194
Score = 290 (107.1 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 51/93 (54%), Positives = 70/93 (75%)
Query: 9 HQDLEQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRD 68
++D ++ D+++RLWFTYR+ F PIG +G ++D GWGCMLRCGQM++AQAL+ HLGRD
Sbjct: 39 NEDKSKLLLDVSARLWFTYRRKFSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRD 98
Query: 69 WQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQI 100
WQW + K+ E Y +IL F DR+ YSIHQ+
Sbjct: 99 WQWEKHKKQPEEYHRILHCFLDRKDCCYSIHQM 131
Score = 102 (41.0 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 18/26 (69%), Positives = 22/26 (84%)
Query: 167 WQPLVLVIPLRLGIQDINPVYINGIK 192
W+PL+L+IPLRLGI INPVYI+ K
Sbjct: 169 WKPLLLIIPLRLGINHINPVYIDAFK 194
>UNIPROTKB|Q2XPP4 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:39946 "Oryza
sativa Indica Group" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005775 "vacuolar lumen" evidence=ISS] [GO:0005776 "autophagic
vacuole" evidence=ISS] [GO:0006914 "autophagy" evidence=ISS]
[GO:0016807 "cysteine-type carboxypeptidase activity" evidence=ISS]
[GO:0019786 "APG8-specific protease activity" evidence=ISS]
Pfam:PF03416 GO:GO:0015031 GO:GO:0005776 GO:GO:0006914
GO:GO:0006508 GO:GO:0005775 HSSP:Q9Y4P1 GO:GO:0019786 GO:GO:0016807
InterPro:IPR005078 PANTHER:PTHR22624 EMBL:DQ269984 EMBL:CM000129
ProteinModelPortal:Q2XPP4 MEROPS:C54.001 Gramene:Q2XPP4
eggNOG:COG5636 Uniprot:Q2XPP4
Length = 478
Score = 258 (95.9 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
Identities = 49/113 (43%), Positives = 66/113 (58%)
Query: 18 DITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQW-NVNSK 76
D +SR+W TYR+GF I DS T+D WGCM+R QM++AQAL+F HLGR W+ +
Sbjct: 135 DFSSRIWITYRRGFDAISDSKYTSDVNWGCMVRSSQMLVAQALIFHHLGRSWRRPSEKPY 194
Query: 77 EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAK 129
Y+ IL MF D +SIH + G S G A G W GP + + + L +
Sbjct: 195 NPEYIGILHMFGDSEACAFSIHNLLQAGNSYGLAAGSWVGPYAMCRAWQTLVR 247
Score = 143 (55.4 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
Identities = 36/104 (34%), Positives = 54/104 (51%)
Query: 200 SPVYDMVKILSSTYNMQTPRY------EFTFPQSLGVIGGKPNHALYFIGYVGNDVIFLD 253
SP+ +V ++ + PRY FTFPQSLG++GGKP + Y G + ++LD
Sbjct: 303 SPILLLVPLVLGLDKIN-PRYIPLLKETFTFPQSLGILGGKPGTSTYIAGVQDDRALYLD 361
Query: 254 PHTNQNIGCVYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAV 297
PH Q D D+ + S+YHC L + +DPS+A+
Sbjct: 362 PHEVQ---MAVDIAADNIEADTSSYHCSTVRDLALDLIDPSLAI 402
Score = 91 (37.1 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 155 CTTNKRASSNPQWQPLVLVIPLRLGIQDINPVYINGIKKCYALPIS 200
C NK S+ W P++L++PL LG+ INP YI +K+ + P S
Sbjct: 293 CDFNKGQST---WSPILLLVPLVLGLDKINPRYIPLLKETFTFPQS 335
>TAIR|locus:2051754 [details] [associations]
symbol:AT2G44140 "AT2G44140" species:3702 "Arabidopsis
thaliana" [GO:0006914 "autophagy" evidence=ISS] [GO:0008233
"peptidase activity" evidence=ISS] [GO:0009507 "chloroplast"
evidence=ISM] Pfam:PF03416 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0015031 GO:GO:0005776 GO:GO:0006914 GO:GO:0006508
GO:GO:0005775 EMBL:AC004005 EMBL:AB073171 EMBL:AK227012
IPI:IPI00521369 IPI:IPI00541858 PIR:T00694 RefSeq:NP_850412.1
RefSeq:NP_973687.1 UniGene:At.48588 UniGene:At.75169 HSSP:Q9Y4P1
ProteinModelPortal:Q8S929 SMR:Q8S929 MEROPS:C54.A01 PaxDb:Q8S929
PRIDE:Q8S929 EnsemblPlants:AT2G44140.1 GeneID:819020
KEGG:ath:AT2G44140 TAIR:At2g44140 eggNOG:NOG239662
HOGENOM:HOG000007008 InParanoid:Q8S929 KO:K08342 OMA:PYRESST
PhylomeDB:Q8S929 ProtClustDB:CLSN2685022 Genevestigator:Q8S929
GO:GO:0019786 GO:GO:0016807 InterPro:IPR005078 PANTHER:PTHR22624
Uniprot:Q8S929
Length = 467
Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 97/301 (32%), Positives = 145/301 (48%)
Query: 12 LEQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQW 71
L ++ D +S++ TYRKGF P D+ T+D WGCM+R QM+ AQALLF LGR W
Sbjct: 135 LAALQLDFSSKILMTYRKGFEPFRDTTYTSDVNWGCMIRSSQMLFAQALLFHRLGRAWTK 194
Query: 72 NVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLA--- 128
E+ YL+ L+ F D + +SIH + + GAS G A G W GP + + LA
Sbjct: 195 KSELPEQEYLETLEPFGDSEPSAFSIHNLIIAGASYGLAAGSWVGPYAICRAWESLACKK 254
Query: 129 -KYDDWSSIVFHVALDNTLVVNQVKK-----LCTTNKRAS------SNPQWQPLVLVIPL 176
K D + +A+ ++ LC + S +W P++L++PL
Sbjct: 255 RKQTDSKNQTLPMAVHIVSGSEDGERGGAPILCIEDATKSCLEFSKGQSEWTPIILLVPL 314
Query: 177 RLGIQDINPVYINGIKKCYALPISPVYDMVKILSSTYNMQTPRYEFTFPQSLGVIGGKPN 236
LG+ +NP YI L +T FTFPQS+G++GGKP
Sbjct: 315 VLGLDSVNPRYIPS------------------LVAT---------FTFPQSVGILGGKPG 347
Query: 237 HALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIA 296
+ Y +G + +LDPH Q + V + D + S+YHC + + +DPS+A
Sbjct: 348 ASTYIVGVQEDKGFYLDPHEVQQVVTVNKETPDVDT---SSYHCNVLRYVPLESLDPSLA 404
Query: 297 V 297
+
Sbjct: 405 L 405
>MGI|MGI:2651854 [details] [associations]
symbol:Atg4c "autophagy related 4C, cysteine peptidase"
species:10090 "Mus musculus" [GO:0000045 "autophagic vacuole
assembly" evidence=ISO] [GO:0004197 "cysteine-type endopeptidase
activity" evidence=ISO;ISS] [GO:0005576 "extracellular region"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISO] [GO:0006810 "transport" evidence=IEA]
[GO:0006914 "autophagy" evidence=ISO;ISS] [GO:0008152 "metabolic
process" evidence=ISA] [GO:0008233 "peptidase activity"
evidence=ISO] [GO:0008234 "cysteine-type peptidase activity"
evidence=ISA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] MGI:MGI:2651854
Pfam:PF03416 GO:GO:0005737 GO:GO:0005576 GO:GO:0015031
GO:GO:0000045 GO:GO:0006914 GO:GO:0006508 GO:GO:0004197
eggNOG:NOG239662 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
GeneTree:ENSGT00530000063000 MEROPS:C54.004 CTD:84938
HOGENOM:HOG000294192 HOVERGEN:HBG050537 OMA:PARSGCT
OrthoDB:EOG4GB760 EMBL:AJ312233 EMBL:AL627166 EMBL:BC058981
IPI:IPI00177235 RefSeq:NP_001139439.1 RefSeq:NP_778194.3
UniGene:Mm.241663 ProteinModelPortal:Q811C2 SMR:Q811C2
STRING:Q811C2 PhosphoSite:Q811C2 PRIDE:Q811C2
Ensembl:ENSMUST00000030279 Ensembl:ENSMUST00000180278 GeneID:242557
KEGG:mmu:242557 InParanoid:B1ASJ9 NextBio:385412 Bgee:Q811C2
CleanEx:MM_ATG4C Genevestigator:Q811C2
GermOnline:ENSMUSG00000028550 Uniprot:Q811C2
Length = 458
Score = 186 (70.5 bits), Expect = 4.1e-34, Sum P(3) = 4.1e-34
Identities = 33/61 (54%), Positives = 42/61 (68%)
Query: 11 DLEQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQ 70
++E+ R+D SR+W TYR+ F I S LTTD GWGC LR GQM++AQ L+ LGR W
Sbjct: 75 NVEEFRKDFISRIWLTYREEFPQIEASALTTDCGWGCTLRTGQMLLAQGLILHFLGRAWT 134
Query: 71 W 71
W
Sbjct: 135 W 135
Score = 156 (60.0 bits), Expect = 4.1e-34, Sum P(3) = 4.1e-34
Identities = 38/126 (30%), Positives = 67/126 (53%)
Query: 76 KEEAY-LKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYD 131
+ EAY KI+ F D A + +H++ G GK G+W+GP VA +LRK A++
Sbjct: 192 RNEAYHRKIISWFGDSPVAVFGLHRLIEFGKKSGKKAGDWYGPAVVAHILRKAVEEARHP 251
Query: 132 DWSSIVFHVALDNTLVVNQVKKLCTTNKRASSNPQWQPLVLVIPLRLGIQDINPVYINGI 191
D + +VA D T+ + V T + A + + + +++++P+RLG + N Y+ +
Sbjct: 252 DLQGLTIYVAQDCTVYNSDVIDKQTDSVTAG-DARDKAVIILVPVRLGGERTNTDYLEFV 310
Query: 192 KKCYAL 197
K +L
Sbjct: 311 KGVLSL 316
Score = 126 (49.4 bits), Expect = 4.1e-34, Sum P(3) = 4.1e-34
Identities = 25/70 (35%), Positives = 39/70 (55%)
Query: 228 LGVIGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQDSEKKLDSTYHCPQASRLH 287
+G+IGGKP + YF G+ + +I++DPH Q+ V K+ E T+HCP ++
Sbjct: 320 VGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKDFPLE-----TFHCPSPKKMS 374
Query: 288 ILHMDPSIAV 297
MDPS +
Sbjct: 375 FRKMDPSCTI 384
>FB|FBgn0038325 [details] [associations]
symbol:CG6194 species:7227 "Drosophila melanogaster"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0006914 "autophagy"
evidence=ISS] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=ISS] [GO:0035071 "salivary gland cell autophagic cell
death" evidence=IEP] [GO:0048102 "autophagic cell death"
evidence=IEP] Pfam:PF03416 EMBL:AE014297 GO:GO:0005737
GO:GO:0015031 GO:GO:0006914 GO:GO:0006508 GO:GO:0035071
GO:GO:0004197 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
GeneTree:ENSGT00530000063000 MEROPS:C54.A03 FlyBase:FBgn0038325
EMBL:BT100116 RefSeq:NP_650452.1 UniGene:Dm.2122 SMR:Q9VF80
MINT:MINT-935388 EnsemblMetazoa:FBtr0083115 GeneID:41868
KEGG:dme:Dmel_CG6194 UCSC:CG6194-RA InParanoid:Q9VF80 OMA:ICHFLGR
GenomeRNAi:41868 NextBio:826008 Uniprot:Q9VF80
Length = 668
Score = 275 (101.9 bits), Expect = 4.2e-34, Sum P(2) = 4.2e-34
Identities = 60/173 (34%), Positives = 98/173 (56%)
Query: 10 QDLEQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDW 69
+ +E RRD SR+W TYR+ F + S T+D GWGCMLR GQM+ AQ L+ LGR W
Sbjct: 261 EGIEGFRRDFYSRIWMTYRREFPIMNGSNYTSDCGWGCMLRSGQMLFAQGLICHFLGRSW 320
Query: 70 QWNVNSK------EEAYLKILKMFEDR--RTAPYSIHQIALTGASEGKAVGEWFGPNTVA 121
+++ S+ + + KI+K F D +++P+SIH + G GK G+W+GP +V+
Sbjct: 321 RYDSESQLHSTYEDNMHKKIVKWFGDSSSKSSPFSIHALVRLGEHLGKKPGDWYGPASVS 380
Query: 122 QVLRKLAKYD-----DWSSIVFHVALDNTLVVNQVKKLCTTNKRASS-NPQWQ 168
+L+ ++ D+ +I +VA D T+ + ++ C+ + A + WQ
Sbjct: 381 YLLKHALEHAAQENADFDNISVYVAKDCTIYLQDIEDQCSIPEPAPKPHVPWQ 433
Score = 129 (50.5 bits), Expect = 4.2e-34, Sum P(2) = 4.2e-34
Identities = 31/82 (37%), Positives = 46/82 (56%)
Query: 228 LGVIGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQDSEKKLDSTYHCPQASRLH 287
LG++GGKP H+LYF+G+ + +I LDPH Q + D Q++ L S +HC +L
Sbjct: 485 LGILGGKPKHSLYFVGFQEDRLIHLDPHYCQEM---VDVNQENFS-LHS-FHCKSPRKLK 539
Query: 288 ILHMDPSIAVVSQ-RSYSDYKN 308
MDPS + + SD+ N
Sbjct: 540 ASKMDPSCCIGFYCATKSDFDN 561
Score = 82 (33.9 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 150 QVKKLCTTNKRASSNPQWQPLVLVIPLRLGIQDINPVYINGIK 192
Q K+ + W+ L+++IPLRLG +NPVY + +K
Sbjct: 434 QAKRPQAETTKTEQQQHWKSLIVLIPLRLGSDKLNPVYAHCLK 476
>UNIPROTKB|C9J3C0 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 GO:GO:0045732 HOGENOM:HOG000007008 InterPro:IPR005078
PANTHER:PTHR22624 EMBL:AC133528 IPI:IPI01018366 HGNC:HGNC:20790
ChiTaRS:ATG4B ProteinModelPortal:C9J3C0 SMR:C9J3C0 STRING:C9J3C0
Ensembl:ENST00000429899 ArrayExpress:C9J3C0 Bgee:C9J3C0
Uniprot:C9J3C0
Length = 147
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 61/112 (54%), Positives = 87/112 (77%)
Query: 48 MLRCGQMVIAQALLFLHLGRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGAS 106
MLRCGQM+ AQAL+ HLGRDW+W ++ ++Y +L F DR+ + YSIHQIA G
Sbjct: 1 MLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVG 60
Query: 107 EGKAVGEWFGPNTVAQVLRKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 158
EGK++G+W+GPNTVAQVL+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 61 EGKSIGQWYGPNTVAQVLKKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 112
>UNIPROTKB|G5E979 [details] [associations]
symbol:ATG4A "ATG4 autophagy related 4 homolog A (S.
cerevisiae), isoform CRA_e" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] Pfam:PF03416 GO:GO:0005737 GO:GO:0015031
GO:GO:0006914 GO:GO:0008234 GO:GO:0006508 EMBL:CH471120
InterPro:IPR005078 PANTHER:PTHR22624 EMBL:AL031177 UniGene:Hs.8763
HGNC:HGNC:16489 ProteinModelPortal:G5E979 SMR:G5E979 PRIDE:G5E979
Ensembl:ENST00000343524 ArrayExpress:G5E979 Bgee:G5E979
Uniprot:G5E979
Length = 231
Score = 274 (101.5 bits), Expect = 6.2e-33, Sum P(2) = 6.2e-33
Identities = 48/84 (57%), Positives = 64/84 (76%)
Query: 18 DITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQWNVNSKE 77
DI++RLWFTYR+ F PIG +G ++D GWGCMLRCGQM++AQAL+ HLGRDW W ++
Sbjct: 48 DISARLWFTYRRKFSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWSWEKQKEQ 107
Query: 78 -EAYLKILKMFEDRRTAPYSIHQI 100
+ Y +IL+ F DR+ YSIHQ+
Sbjct: 108 PKEYQRILQCFLDRKDCCYSIHQM 131
Score = 101 (40.6 bits), Expect = 6.2e-33, Sum P(2) = 6.2e-33
Identities = 16/26 (61%), Positives = 22/26 (84%)
Query: 167 WQPLVLVIPLRLGIQDINPVYINGIK 192
W+PL+L++PLRLGI INPVY++ K
Sbjct: 169 WKPLLLIVPLRLGINQINPVYVDAFK 194
>UNIPROTKB|E1BS34 [details] [associations]
symbol:ATG4C "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000045 "autophagic vacuole assembly"
evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
Pfam:PF03416 GO:GO:0005737 GO:GO:0005576 GO:GO:0015031
GO:GO:0000045 GO:GO:0006508 GO:GO:0004197 KO:K08342
InterPro:IPR005078 PANTHER:PTHR22624 GeneTree:ENSGT00530000063000
CTD:84938 OMA:ICHFLGR EMBL:AADN02012479 IPI:IPI00590224
RefSeq:XP_422520.2 Ensembl:ENSGALT00000017894 GeneID:424688
KEGG:gga:424688 NextBio:20826988 Uniprot:E1BS34
Length = 459
Score = 186 (70.5 bits), Expect = 9.4e-33, Sum P(3) = 9.4e-33
Identities = 33/61 (54%), Positives = 42/61 (68%)
Query: 11 DLEQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQ 70
++E+ R+D SR+W TYR+ F I S LTTD GWGC LR GQM++AQ L+ LGR W
Sbjct: 75 NVEEFRKDFISRIWLTYREEFPQIKGSALTTDCGWGCTLRTGQMLLAQGLMLHFLGRAWV 134
Query: 71 W 71
W
Sbjct: 135 W 135
Score = 147 (56.8 bits), Expect = 9.4e-33, Sum P(3) = 9.4e-33
Identities = 37/127 (29%), Positives = 64/127 (50%)
Query: 76 KEEAY-LKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYD 131
+ E Y KI+ F D A + +HQ+ G GK G+W+GP VA +LRK A+
Sbjct: 192 RNEVYHRKIISWFGDSPLAAFGLHQLIEYGKKSGKIAGDWYGPAVVAHILRKAVEEARDP 251
Query: 132 DWSSIVFHVALDNTLVVNQV-KKLCTTNKRASSNPQWQPLVLVIPLRLGIQDINPVYING 190
+ + +VA D T+ + V + C+ S + +++++P+RLG + N Y+
Sbjct: 252 ELQGVTVYVAQDCTVYSSDVIDRQCSFMD--SGETDTKAVIILVPVRLGGERTNMDYLEF 309
Query: 191 IKKCYAL 197
+K +L
Sbjct: 310 VKGILSL 316
Score = 122 (48.0 bits), Expect = 9.4e-33, Sum P(3) = 9.4e-33
Identities = 24/70 (34%), Positives = 39/70 (55%)
Query: 228 LGVIGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQDSEKKLDSTYHCPQASRLH 287
+G+IGGKP + YF G+ + +I++DPH Q+ V K+ E ++HCP ++
Sbjct: 320 VGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKDFPLE-----SFHCPSPKKMS 374
Query: 288 ILHMDPSIAV 297
MDPS +
Sbjct: 375 FKKMDPSCTI 384
>UNIPROTKB|C9JVD5 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 GO:GO:0045732 InterPro:IPR005078 PANTHER:PTHR22624
EMBL:AC133528 HGNC:HGNC:20790 ChiTaRS:ATG4B IPI:IPI00894423
ProteinModelPortal:C9JVD5 SMR:C9JVD5 STRING:C9JVD5
Ensembl:ENST00000430617 ArrayExpress:C9JVD5 Bgee:C9JVD5
Uniprot:C9JVD5
Length = 105
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 58/105 (55%), Positives = 81/105 (77%)
Query: 48 MLRCGQMVIAQALLFLHLGRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGAS 106
MLRCGQM+ AQAL+ HLGRDW+W ++ ++Y +L F DR+ + YSIHQIA G
Sbjct: 1 MLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVG 60
Query: 107 EGKAVGEWFGPNTVAQVLRKLAKYDDWSSIVFHVALDNTLVVNQV 151
EGK++G+W+GPNTVAQVL+KLA +D WSS+ H+A+DNT+V+ ++
Sbjct: 61 EGKSIGQWYGPNTVAQVLKKLAVFDTWSSLAVHIAMDNTVVMEEI 105
>ZFIN|ZDB-GENE-040625-84 [details] [associations]
symbol:atg4c "autophagy-related 4C (yeast)"
species:7955 "Danio rerio" [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006914
"autophagy" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] Pfam:PF03416 ZFIN:ZDB-GENE-040625-84 GO:GO:0005737
GO:GO:0015031 GO:GO:0006914 GO:GO:0008234 GO:GO:0006508
eggNOG:NOG239662 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
GeneTree:ENSGT00530000063000 MEROPS:C54.004 CTD:84938
HOGENOM:HOG000294192 HOVERGEN:HBG050537 OMA:PARSGCT
OrthoDB:EOG4GB760 EMBL:BX936431 EMBL:BC071514 IPI:IPI00512295
RefSeq:NP_001002103.1 UniGene:Dr.77023 Ensembl:ENSDART00000051779
Ensembl:ENSDART00000127879 GeneID:415193 KEGG:dre:415193
InParanoid:Q6IQ96 NextBio:20818863 Uniprot:Q6IQ96
Length = 463
Score = 197 (74.4 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
Identities = 33/62 (53%), Positives = 46/62 (74%)
Query: 11 DLEQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQ 70
++++ R+D TSR+W TYR+ F + S T+D GWGC LR GQM++AQALL LGRDW+
Sbjct: 74 NVDEFRKDFTSRVWLTYREEFPALPGSSFTSDCGWGCTLRAGQMILAQALLLHILGRDWK 133
Query: 71 WN 72
W+
Sbjct: 134 WS 135
Score = 191 (72.3 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
Identities = 61/196 (31%), Positives = 93/196 (47%)
Query: 76 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAK--YDDW 133
KE + I+ F D +A I+++ G + GK G+W+GP VA +LRK D
Sbjct: 190 KETYHRTIVSWFGDGPSAQLGIYKLVELGMTSGKQAGDWYGPAVVAHILRKAVDEAVDAM 249
Query: 134 -SSIVFHVALDNTLVVNQVKKLCTTNKRASSNPQW---------QPLVLVIPLRLGIQDI 183
I +VA D T+ V +T + S+PQ + +V++IP+RLG + I
Sbjct: 250 LKGIRVYVAQDCTVYSADVIDSHSTRTESHSDPQGLDSGASPDSRAVVILIPVRLGGEKI 309
Query: 184 NPVYINGIKKCYALPISPVYDMVKILSSTYNMQTPRYEFTFPQSLGVIGGKPNHALYFIG 243
NP Y+N +K ILS Y +G+IGGKP A YF+G
Sbjct: 310 NPEYLNFVKS--------------ILSLEY-------------CIGIIGGKPKQAYYFVG 342
Query: 244 YVGNDVIFLDPHTNQN 259
+ + +I++DPH Q+
Sbjct: 343 FQDDSLIYMDPHYCQS 358
Score = 130 (50.8 bits), Expect = 3.3e-23, Sum P(2) = 3.3e-23
Identities = 26/70 (37%), Positives = 40/70 (57%)
Query: 228 LGVIGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQDSEKKLDSTYHCPQASRLH 287
+G+IGGKP A YF+G+ + +I++DPH Q+ V S+ L S +HCP ++
Sbjct: 327 IGIIGGKPKQAYYFVGFQDDSLIYMDPHYCQSFVDV----STSDFPLQS-FHCPSPKKMS 381
Query: 288 ILHMDPSIAV 297
MDPS +
Sbjct: 382 FSKMDPSCTI 391
>UNIPROTKB|K7EJA5 [details] [associations]
symbol:ATG4D "Cysteine protease ATG4D" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
InterPro:IPR005078 PANTHER:PTHR22624 HGNC:HGNC:20789 EMBL:AC011461
Ensembl:ENST00000586863 Uniprot:K7EJA5
Length = 177
Score = 171 (65.3 bits), Expect = 1.1e-26, Sum P(3) = 1.1e-26
Identities = 32/63 (50%), Positives = 44/63 (69%)
Query: 11 DLEQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQ 70
D+++ +RD SRLW TYR+ F P+ LT+D GWGCMLR GQM++AQ LL L R ++
Sbjct: 36 DIQRFQRDFVSRLWLTYRRDFPPLPGGCLTSDCGWGCMLRSGQMMLAQGLLLHFLPRVYK 95
Query: 71 WNV 73
+V
Sbjct: 96 ADV 98
Score = 85 (35.0 bits), Expect = 1.1e-26, Sum P(3) = 1.1e-26
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 228 LGVIGGKPNHALYFIGYVG 246
LG++GGKP H+LYFIGY G
Sbjct: 145 LGIMGGKPRHSLYFIGYQG 163
Score = 79 (32.9 bits), Expect = 1.1e-26, Sum P(3) = 1.1e-26
Identities = 12/34 (35%), Positives = 24/34 (70%)
Query: 160 RASSNPQWQPLVLVIPLRLGIQDINPVYINGIKK 193
R +W+ +V+++P+RLG + +NPVY+ +K+
Sbjct: 104 RPDPTAEWKSVVILVPVRLGGETLNPVYVPCVKE 137
>UNIPROTKB|A6QQI5 [details] [associations]
symbol:ATG4D "ATG4D protein" species:9913 "Bos taurus"
[GO:0015031 "protein transport" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0006914
"autophagy" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416 GO:GO:0005737
GO:GO:0015031 GO:GO:0006914 GO:GO:0008234 GO:GO:0006508
InterPro:IPR005078 PANTHER:PTHR22624 GeneTree:ENSGT00530000063000
HOGENOM:HOG000294192 HOVERGEN:HBG050537 MEROPS:C54.005
EMBL:DAAA02019466 EMBL:BC149849 IPI:IPI00867381 UniGene:Bt.30691
Ensembl:ENSBTAT00000053355 Uniprot:A6QQI5
Length = 359
Score = 176 (67.0 bits), Expect = 3.2e-26, Sum P(3) = 3.2e-26
Identities = 32/63 (50%), Positives = 44/63 (69%)
Query: 11 DLEQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQ 70
D+++ +RD SRLW TYR+ F P+ LT+D GWGCMLR GQM++AQ LL L R ++
Sbjct: 107 DIQRFQRDFVSRLWLTYRRDFPPLAGGSLTSDCGWGCMLRSGQMMLAQGLLLHFLPRVYK 166
Query: 71 WNV 73
+V
Sbjct: 167 ADV 169
Score = 133 (51.9 bits), Expect = 3.2e-26, Sum P(3) = 3.2e-26
Identities = 29/70 (41%), Positives = 42/70 (60%)
Query: 228 LGVIGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQDSEKKLDSTYHCPQASRLH 287
LG++GGKP H+LYFIGY + +++LDPH Q D Q ++ L+S +HC ++
Sbjct: 216 LGIMGGKPRHSLYFIGYQDDFLLYLDPHYCQP---TVDVSQ-ADFPLES-FHCTSPRKMA 270
Query: 288 ILHMDPSIAV 297
MDPS V
Sbjct: 271 FAKMDPSCTV 280
Score = 79 (32.9 bits), Expect = 3.2e-26, Sum P(3) = 3.2e-26
Identities = 12/34 (35%), Positives = 24/34 (70%)
Query: 160 RASSNPQWQPLVLVIPLRLGIQDINPVYINGIKK 193
R +W+ +V+++P+RLG + +NPVY+ +K+
Sbjct: 175 RPDPTAEWKSVVILVPVRLGGETLNPVYVPCVKE 208
>SGD|S000005167 [details] [associations]
symbol:ATG4 "Conserved cysteine protease required for
autophagy" species:4932 "Saccharomyces cerevisiae" [GO:0006914
"autophagy" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004197
"cysteine-type endopeptidase activity" evidence=IMP;IDA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0051697 "protein
delipidation" evidence=IDA] [GO:0006501 "C-terminal protein
lipidation" evidence=IMP] [GO:0000045 "autophagic vacuole assembly"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0006612
"protein targeting to membrane" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0034727 "piecemeal microautophagy of nucleus"
evidence=IMP] [GO:0032258 "CVT pathway" evidence=IMP] [GO:0000422
"mitochondrion degradation" evidence=IMP] [GO:0016485 "protein
processing" evidence=IMP] SGD:S000005167 Pfam:PF03416 GO:GO:0005829
GO:GO:0005634 GO:GO:0006612 GO:GO:0000045 GO:GO:0006508
EMBL:BK006947 GO:GO:0000422 GO:GO:0016485 GO:GO:0032258
GO:GO:0004197 GO:GO:0034727 GO:GO:0006501 EMBL:Z69381
eggNOG:NOG239662 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
GeneTree:ENSGT00530000063000 MEROPS:C54.001 OrthoDB:EOG470XRS
EMBL:Z71499 EMBL:U20390 PIR:S63181 RefSeq:NP_014176.2
ProteinModelPortal:P53867 SMR:P53867 DIP:DIP-2339N IntAct:P53867
MINT:MINT-683938 STRING:P53867 EnsemblFungi:YNL223W GeneID:855498
KEGG:sce:YNL223W CYGD:YNL223w HOGENOM:HOG000034154 OMA:IGWGCMI
NextBio:979490 Genevestigator:P53867 GermOnline:YNL223W
GO:GO:0051697 Uniprot:P53867
Length = 494
Score = 201 (75.8 bits), Expect = 2.0e-24, Sum P(3) = 2.0e-24
Identities = 52/154 (33%), Positives = 78/154 (50%)
Query: 41 TDKGWGCMLRCGQMVIAQALLFLHLGRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQI 100
TD GWGCM+R GQ ++ AL LHLGRD++ N N E K + F D AP+S+H
Sbjct: 141 TDIGWGCMIRTGQSLLGNALQILHLGRDFRVNGNESLERESKFVNWFNDTPEAPFSLHNF 200
Query: 101 ALTGAS-EGKAVGEWFGPNTVAQVLRKLAK-YDDWSSIVFHVALDN-TLVVNQVKKLCTT 157
G K GEWFGP A+ ++ L + + V++ + + N+V+K+
Sbjct: 201 VSAGTELSDKRPGEWFGPAATARSIQSLIYGFPECGIDDCIVSVSSGDIYENEVEKVF-- 258
Query: 158 NKRASSNPQWQPLVLVIPLRLGIQDINPVYINGI 191
+ NP + L L + ++LGI +N Y I
Sbjct: 259 ----AENPNSRILFL-LGVKLGINAVNESYRESI 287
Score = 114 (45.2 bits), Expect = 2.0e-24, Sum P(3) = 2.0e-24
Identities = 26/72 (36%), Positives = 39/72 (54%)
Query: 226 QSLGVIGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQDSEKKLDSTYHCPQASR 285
QS+G+ GG+P+ +LYF GY GN+ + DPH Q V D +S H + +
Sbjct: 295 QSVGIAGGRPSSSLYFFGYQGNEFLHFDPHIPQP--AVEDSFVES-------CHTSKFGK 345
Query: 286 LHILHMDPSIAV 297
L + MDPS+ +
Sbjct: 346 LQLSEMDPSMLI 357
Score = 55 (24.4 bits), Expect = 2.0e-24, Sum P(3) = 2.0e-24
Identities = 11/17 (64%), Positives = 13/17 (76%)
Query: 18 DITSRLWFTYRKGFVPI 34
D+ SR+ FTYR FVPI
Sbjct: 89 DVQSRVNFTYRTRFVPI 105
>DICTYBASE|DDB_G0273553 [details] [associations]
symbol:atg4-2 "peptidase C54 family protein"
species:44689 "Dictyostelium discoideum" [GO:0006914 "autophagy"
evidence=IEA;ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006508 "proteolysis" evidence=IEA;ISS] [GO:0004197
"cysteine-type endopeptidase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
dictyBase:DDB_G0273553 dictyBase:DDB_G0273443 Pfam:PF03416
GO:GO:0005634 GO:GO:0005737 GO:GO:0015031 GO:GO:0006914
GO:GO:0006508 GenomeReviews:CM000151_GR EMBL:AAFI02000010
GO:GO:0004197 HSSP:Q9Y4P1 eggNOG:NOG239662 InterPro:IPR005078
PANTHER:PTHR22624 EMBL:AY191018 RefSeq:XP_644593.1
RefSeq:XP_644658.1 ProteinModelPortal:Q557H7 MEROPS:C54.A08
EnsemblProtists:DDB0185148 EnsemblProtists:DDB0304861
GeneID:8618957 GeneID:8619020 KEGG:ddi:DDB_G0273443
KEGG:ddi:DDB_G0273553 OMA:EEWLAPT ProtClustDB:CLSZ2431228
Uniprot:Q557H7
Length = 745
Score = 181 (68.8 bits), Expect = 3.1e-24, Sum P(3) = 3.1e-24
Identities = 38/88 (43%), Positives = 54/88 (61%)
Query: 18 DITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALL-FLHLGRDWQWNVNSK 76
D+ S +WF+YRK F PI ++ +TTD GWGCMLR GQM++A+AL+ L+ D + K
Sbjct: 233 DVASMIWFSYRKDFPPIENTNITTDIGWGCMLRTGQMILARALIKHLYKENDMVPEIERK 292
Query: 77 E--EAYLKILKMFED--RRTAPYSIHQI 100
+ Y ++L F D + Y IHQI
Sbjct: 293 KPHSNYSQVLAWFSDYPSKEHVYGIHQI 320
Score = 129 (50.5 bits), Expect = 3.1e-24, Sum P(3) = 3.1e-24
Identities = 33/91 (36%), Positives = 50/91 (54%)
Query: 209 LSSTYNMQTPRYEFTFPQSLGVIGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQ 268
L+STY ++ + PQSLG IGGKP + YFIG+ + VI+LDPH V +
Sbjct: 519 LNSTY-IEKLKLLLKLPQSLGFIGGKPKQSFYFIGFQDDQVIYLDPHF------VQESVN 571
Query: 269 DSEKKLDSTYH-C-PQASRLHILHMDPSIAV 297
+ +TY C PQ ++ +DPS+++
Sbjct: 572 PNSFDYSNTYSGCIPQ--KMPFTQLDPSLSI 600
Score = 86 (35.3 bits), Expect = 8.7e-16, Sum P(2) = 8.7e-16
Identities = 22/56 (39%), Positives = 31/56 (55%)
Query: 149 NQV---KKLCTTNKRASS-NPQWQPLVLVIPLRLGIQDINPVYINGIKKCYALPIS 200
NQV + L N SS P+W+ L+++IPL+LG +N YI +K LP S
Sbjct: 481 NQVFDDESLFDYNTAISSIPPKWKSLIIMIPLKLGADKLNSTYIEKLKLLLKLPQS 536
Score = 75 (31.5 bits), Expect = 3.1e-24, Sum P(3) = 3.1e-24
Identities = 12/48 (25%), Positives = 23/48 (47%)
Query: 111 VGEWFGPNTVAQVLRKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 158
V EW P ++ +LR+L K+ + +V D + + + LC +
Sbjct: 368 VEEWLAPTRISNILRQLIKFQHLEDLEMYVPTDGVIYKDYINNLCNNS 415
>DICTYBASE|DDB_G0273443 [details] [associations]
symbol:atg4-1 "peptidase C54 family protein"
species:44689 "Dictyostelium discoideum" [GO:0006914 "autophagy"
evidence=IEA;ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006508 "proteolysis" evidence=IEA;ISS] [GO:0004197
"cysteine-type endopeptidase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
dictyBase:DDB_G0273553 dictyBase:DDB_G0273443 Pfam:PF03416
GO:GO:0005634 GO:GO:0005737 GO:GO:0015031 GO:GO:0006914
GO:GO:0006508 GenomeReviews:CM000151_GR EMBL:AAFI02000010
GO:GO:0004197 HSSP:Q9Y4P1 eggNOG:NOG239662 InterPro:IPR005078
PANTHER:PTHR22624 EMBL:AY191018 RefSeq:XP_644593.1
RefSeq:XP_644658.1 ProteinModelPortal:Q557H7 MEROPS:C54.A08
EnsemblProtists:DDB0185148 EnsemblProtists:DDB0304861
GeneID:8618957 GeneID:8619020 KEGG:ddi:DDB_G0273443
KEGG:ddi:DDB_G0273553 OMA:EEWLAPT ProtClustDB:CLSZ2431228
Uniprot:Q557H7
Length = 745
Score = 181 (68.8 bits), Expect = 3.1e-24, Sum P(3) = 3.1e-24
Identities = 38/88 (43%), Positives = 54/88 (61%)
Query: 18 DITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALL-FLHLGRDWQWNVNSK 76
D+ S +WF+YRK F PI ++ +TTD GWGCMLR GQM++A+AL+ L+ D + K
Sbjct: 233 DVASMIWFSYRKDFPPIENTNITTDIGWGCMLRTGQMILARALIKHLYKENDMVPEIERK 292
Query: 77 E--EAYLKILKMFED--RRTAPYSIHQI 100
+ Y ++L F D + Y IHQI
Sbjct: 293 KPHSNYSQVLAWFSDYPSKEHVYGIHQI 320
Score = 129 (50.5 bits), Expect = 3.1e-24, Sum P(3) = 3.1e-24
Identities = 33/91 (36%), Positives = 50/91 (54%)
Query: 209 LSSTYNMQTPRYEFTFPQSLGVIGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQ 268
L+STY ++ + PQSLG IGGKP + YFIG+ + VI+LDPH V +
Sbjct: 519 LNSTY-IEKLKLLLKLPQSLGFIGGKPKQSFYFIGFQDDQVIYLDPHF------VQESVN 571
Query: 269 DSEKKLDSTYH-C-PQASRLHILHMDPSIAV 297
+ +TY C PQ ++ +DPS+++
Sbjct: 572 PNSFDYSNTYSGCIPQ--KMPFTQLDPSLSI 600
Score = 86 (35.3 bits), Expect = 8.7e-16, Sum P(2) = 8.7e-16
Identities = 22/56 (39%), Positives = 31/56 (55%)
Query: 149 NQV---KKLCTTNKRASS-NPQWQPLVLVIPLRLGIQDINPVYINGIKKCYALPIS 200
NQV + L N SS P+W+ L+++IPL+LG +N YI +K LP S
Sbjct: 481 NQVFDDESLFDYNTAISSIPPKWKSLIIMIPLKLGADKLNSTYIEKLKLLLKLPQS 536
Score = 75 (31.5 bits), Expect = 3.1e-24, Sum P(3) = 3.1e-24
Identities = 12/48 (25%), Positives = 23/48 (47%)
Query: 111 VGEWFGPNTVAQVLRKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 158
V EW P ++ +LR+L K+ + +V D + + + LC +
Sbjct: 368 VEEWLAPTRISNILRQLIKFQHLEDLEMYVPTDGVIYKDYINNLCNNS 415
>UNIPROTKB|F1MJ23 [details] [associations]
symbol:ATG4C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA]
[GO:0000045 "autophagic vacuole assembly" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0005576 GO:GO:0015031 GO:GO:0000045
GO:GO:0006508 GO:GO:0004197 InterPro:IPR005078 PANTHER:PTHR22624
GeneTree:ENSGT00530000063000 OMA:PARSGCT EMBL:DAAA02008674
IPI:IPI00717434 UniGene:Bt.31619 PRIDE:F1MJ23
Ensembl:ENSBTAT00000013356 Uniprot:F1MJ23
Length = 458
Score = 197 (74.4 bits), Expect = 3.1e-23, Sum P(2) = 3.1e-23
Identities = 62/197 (31%), Positives = 99/197 (50%)
Query: 11 DLEQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQ 70
++E+ R+D SR+W TYR+ F I S LTTD GWGC LR GQM++AQ L+ LGR W
Sbjct: 75 NVEEFRKDFISRIWLTYREEFPQIEGSALTTDCGWGCTLRTGQMLLAQGLILHFLGRAWT 134
Query: 71 W----NV-NSKEEAYLK-ILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 124
W N+ NS E++ +K F TA + + +L+G E K P T++ +
Sbjct: 135 WPDALNIENSDSESWTSNTVKKF----TASF---EASLSGERELKT------P-TIS-LK 179
Query: 125 RKLAKYDD---WSSIVFHVAL-----DNTLVVNQVKKLCTTNKRASSNP-QWQ-PLVLVI 174
K+ +Y D + ++H + D+ L + + +L K++ W P V+
Sbjct: 180 EKMERYSDDREMQNEIYHRKIISWFGDSPLALFGLHQLIECGKKSGKKAGDWYGPAVVAH 239
Query: 175 PLRLGIQDINPVYINGI 191
LR +++ + GI
Sbjct: 240 ILRKAVEEARHPDLKGI 256
Score = 177 (67.4 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 43/127 (33%), Positives = 69/127 (54%)
Query: 76 KEEAY-LKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYD 131
+ E Y KI+ F D A + +HQ+ G GK G+W+GP VA +LRK A++
Sbjct: 192 QNEIYHRKIISWFGDSPLALFGLHQLIECGKKSGKKAGDWYGPAVVAHILRKAVEEARHP 251
Query: 132 DWSSIVFHVALDNTLVVNQV-KKLCTTNKRASSNPQWQPLVLVIPLRLGIQDINPVYING 190
D I +VA D T+ + V K CT+ AS N + +++++P+RLG + N Y++
Sbjct: 252 DLKGITIYVAQDCTVYSSDVIDKQCTS--MASDNTNDKAVIILVPVRLGGERTNADYLDF 309
Query: 191 IKKCYAL 197
+K +L
Sbjct: 310 VKGILSL 316
Score = 130 (50.8 bits), Expect = 3.1e-23, Sum P(2) = 3.1e-23
Identities = 28/81 (34%), Positives = 44/81 (54%)
Query: 228 LGVIGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQDSEKKLDSTYHCPQASRLH 287
+G+IGGKP + YF G+ + +I++DPH Q+ V K+ E T+HCP ++
Sbjct: 320 VGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKDFPLE-----TFHCPSPKKMS 374
Query: 288 ILHMDPSIAVVSQ-RSYSDYK 307
MDPS + R+ D+K
Sbjct: 375 FRKMDPSCTIGFYCRNVQDFK 395
>UNIPROTKB|Q96DT6 [details] [associations]
symbol:ATG4C "Cysteine protease ATG4C" species:9606 "Homo
sapiens" [GO:0005829 "cytosol" evidence=ISS] [GO:0004197
"cysteine-type endopeptidase activity" evidence=IMP] [GO:0008233
"peptidase activity" evidence=IDA] [GO:0000045 "autophagic vacuole
assembly" evidence=IGI] [GO:0006612 "protein targeting to membrane"
evidence=ISS] [GO:0005576 "extracellular region" evidence=IDA]
[GO:0006914 "autophagy" evidence=IGI] [GO:0006508 "proteolysis"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] EMBL:AJ312234
Pfam:PF03416 GO:GO:0005829 GO:GO:0005576 GO:GO:0006612
EMBL:CH471059 GO:GO:0000045 GO:GO:0006508 GO:GO:0004197
eggNOG:NOG239662 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
EMBL:AJ320169 EMBL:AK027773 EMBL:AC103923 EMBL:BC033024
IPI:IPI00156979 RefSeq:NP_116241.2 RefSeq:NP_835739.1
UniGene:Hs.7353 ProteinModelPortal:Q96DT6 SMR:Q96DT6 IntAct:Q96DT6
STRING:Q96DT6 MEROPS:C54.004 PhosphoSite:Q96DT6 DMDM:61211867
PRIDE:Q96DT6 DNASU:84938 Ensembl:ENST00000317868
Ensembl:ENST00000371120 GeneID:84938 KEGG:hsa:84938 UCSC:uc001dat.3
CTD:84938 GeneCards:GC01P063249 HGNC:HGNC:16040 HPA:HPA007049
MIM:611339 neXtProt:NX_Q96DT6 PharmGKB:PA25183 HOGENOM:HOG000294192
HOVERGEN:HBG050537 InParanoid:Q96DT6 OMA:PARSGCT OrthoDB:EOG4GB760
ChiTaRS:ATG4C GenomeRNAi:84938 NextBio:75392 ArrayExpress:Q96DT6
Bgee:Q96DT6 CleanEx:HS_ATG4C Genevestigator:Q96DT6
GermOnline:ENSG00000125703 Uniprot:Q96DT6
Length = 458
Score = 196 (74.1 bits), Expect = 4.5e-23, Sum P(2) = 4.5e-23
Identities = 63/208 (30%), Positives = 101/208 (48%)
Query: 11 DLEQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQ 70
++E+ R+D SR+W TYR+ F I S LTTD GWGC LR GQM++AQ L+ LGR W
Sbjct: 75 NVEEFRKDFISRIWLTYREEFPQIEGSALTTDCGWGCTLRTGQMLLAQGLILHFLGRAWT 134
Query: 71 W----NV-NSKEEAYLK-ILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPN-TVAQV 123
W N+ NS E++ +K F TA + + +L+G E K P ++ +
Sbjct: 135 WPDALNIENSDSESWTSHTVKKF----TASF---EASLSGEREFKT------PTISLKET 181
Query: 124 LRKLAKYDDWSSIVFHVAL-----DNTLVVNQVKKLCTTNKRASSNP-QWQ-PLVLVIPL 176
+ K + + + V+H + D+ L + + +L K++ W P V+ L
Sbjct: 182 IGKYSDDHEMRNEVYHRKIISWFGDSPLALFGLHQLIEYGKKSGKKAGDWYGPAVVAHIL 241
Query: 177 RLGIQDINPVYINGIKKCYALPISPVYD 204
R +++ + GI Y VY+
Sbjct: 242 RKAVEEARHPDLQGIT-IYVAQDCTVYN 268
Score = 159 (61.0 bits), Expect = 2.3e-18, Sum P(2) = 2.3e-18
Identities = 39/126 (30%), Positives = 65/126 (51%)
Query: 76 KEEAY-LKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYD 131
+ E Y KI+ F D A + +HQ+ G GK G+W+GP VA +LRK A++
Sbjct: 192 RNEVYHRKIISWFGDSPLALFGLHQLIEYGKKSGKKAGDWYGPAVVAHILRKAVEEARHP 251
Query: 132 DWSSIVFHVALDNTLVVNQVKKLCTTNKRASSNPQWQPLVLVIPLRLGIQDINPVYINGI 191
D I +VA D T+ + V + + S N + +++++P+RLG + N Y+ +
Sbjct: 252 DLQGITIYVAQDCTVYNSDVIDKQSASM-TSDNADDKAVIILVPVRLGGERTNTDYLEFV 310
Query: 192 KKCYAL 197
K +L
Sbjct: 311 KGILSL 316
Score = 130 (50.8 bits), Expect = 4.5e-23, Sum P(2) = 4.5e-23
Identities = 28/81 (34%), Positives = 44/81 (54%)
Query: 228 LGVIGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQDSEKKLDSTYHCPQASRLH 287
+G+IGGKP + YF G+ + +I++DPH Q+ V K+ E T+HCP ++
Sbjct: 320 VGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKDFPLE-----TFHCPSPKKMS 374
Query: 288 ILHMDPSIAVVSQ-RSYSDYK 307
MDPS + R+ D+K
Sbjct: 375 FRKMDPSCTIGFYCRNVQDFK 395
>UNIPROTKB|E2R5A4 [details] [associations]
symbol:ATG4C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA]
[GO:0000045 "autophagic vacuole assembly" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0005576 GO:GO:0015031 GO:GO:0000045
GO:GO:0006508 GO:GO:0004197 KO:K08342 InterPro:IPR005078
PANTHER:PTHR22624 GeneTree:ENSGT00530000063000 CTD:84938
OMA:PARSGCT EMBL:AAEX03003767 EMBL:AAEX03003768 RefSeq:XP_852273.1
RefSeq:XP_865426.1 ProteinModelPortal:E2R5A4
Ensembl:ENSCAFT00000029726 GeneID:489561 KEGG:cfa:489561
NextBio:20862726 Uniprot:E2R5A4
Length = 458
Score = 194 (73.4 bits), Expect = 8.5e-23, Sum P(2) = 8.5e-23
Identities = 61/196 (31%), Positives = 99/196 (50%)
Query: 11 DLEQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQ 70
++E+ R+D SR+W TYR+ F I S TTD GWGC LR GQM++AQ L+ LGR W
Sbjct: 75 NVEEFRKDFISRIWLTYREEFPQIEGSAFTTDCGWGCTLRTGQMLLAQGLILHFLGRAWT 134
Query: 71 W----NV-NSKEEAYLK-ILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQ-- 122
W N+ NS +++ +K F TA + + +L+G SE K P TV+Q
Sbjct: 135 WPDALNIENSDSDSWTSNTVKKF----TASF---EASLSGESELKT------P-TVSQKE 180
Query: 123 VLRKLAKYDDWSSIVFHVAL-----DNTLVVNQVKKLCTTNKRASSNP-QWQ-PLVLVIP 175
+R+ + + + ++H + D+ L + + +L K++ W P V+
Sbjct: 181 TIRRHSDDHEMRNEIYHRKIISWFGDSPLALFGLHQLIKYGKKSGKKAGDWYGPAVVAHI 240
Query: 176 LRLGIQDINPVYINGI 191
LR +++ + GI
Sbjct: 241 LRKAVEEARHPDLQGI 256
Score = 179 (68.1 bits), Expect = 7.7e-21, Sum P(2) = 7.7e-21
Identities = 44/127 (34%), Positives = 69/127 (54%)
Query: 76 KEEAY-LKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYD 131
+ E Y KI+ F D A + +HQ+ G GK G+W+GP VA +LRK A++
Sbjct: 192 RNEIYHRKIISWFGDSPLALFGLHQLIKYGKKSGKKAGDWYGPAVVAHILRKAVEEARHP 251
Query: 132 DWSSIVFHVALDNTLVVNQV-KKLCTTNKRASSNPQWQPLVLVIPLRLGIQDINPVYING 190
D I +VA D T+ + V K CT+ AS N + ++++IP+RLG + N Y++
Sbjct: 252 DLQGITIYVAQDCTVYSSDVIDKQCTS--MASDNTDDKAVIILIPVRLGGERTNTDYLDF 309
Query: 191 IKKCYAL 197
+K +L
Sbjct: 310 VKGILSL 316
Score = 130 (50.8 bits), Expect = 8.5e-23, Sum P(2) = 8.5e-23
Identities = 28/81 (34%), Positives = 44/81 (54%)
Query: 228 LGVIGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQDSEKKLDSTYHCPQASRLH 287
+G+IGGKP + YF G+ + +I++DPH Q+ V K+ E T+HCP ++
Sbjct: 320 VGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKDFPLE-----TFHCPSPKKMS 374
Query: 288 ILHMDPSIAVVSQ-RSYSDYK 307
MDPS + R+ D+K
Sbjct: 375 FRKMDPSCTIGFYCRNVQDFK 395
>UNIPROTKB|F1S810 [details] [associations]
symbol:ATG4C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA]
[GO:0000045 "autophagic vacuole assembly" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0005576 GO:GO:0015031 GO:GO:0000045
GO:GO:0006508 GO:GO:0004197 InterPro:IPR005078 PANTHER:PTHR22624
GeneTree:ENSGT00530000063000 OMA:PARSGCT EMBL:CU467524
Ensembl:ENSSSCT00000004223 Uniprot:F1S810
Length = 458
Score = 187 (70.9 bits), Expect = 7.1e-22, Sum P(2) = 7.1e-22
Identities = 60/197 (30%), Positives = 98/197 (49%)
Query: 11 DLEQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQ 70
++E+ R+D SR+W TYR+ F + S LTTD GWGC LR GQM++AQ L+ LGR W
Sbjct: 75 NVEEFRKDFISRIWLTYREEFPQLEGSALTTDCGWGCTLRTGQMLLAQGLVLHFLGRAWT 134
Query: 71 W----NV-NSKEEAYLK-ILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 124
W N+ NS E++ +K F TA + + +L+G E K P T++ +
Sbjct: 135 WPDALNIENSDSESWTSNTVKKF----TASF---EASLSGERELKT------P-TIS-LK 179
Query: 125 RKLAKYDD---WSSIVFHVAL-----DNTLVVNQVKKLCTTNKRASSNP-QWQ-PLVLVI 174
+ +Y D + ++H + D+ L + + +L K++ W P V+
Sbjct: 180 ETIGRYSDDREKQNEIYHRKIISWFGDSPLTLFGLHQLIECGKKSGKKAGDWYGPAVVAH 239
Query: 175 PLRLGIQDINPVYINGI 191
LR +++ + GI
Sbjct: 240 ILRKAVEEARHPDLQGI 256
Score = 163 (62.4 bits), Expect = 7.7e-19, Sum P(2) = 7.7e-19
Identities = 40/127 (31%), Positives = 66/127 (51%)
Query: 76 KEEAY-LKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYD 131
+ E Y KI+ F D + +HQ+ G GK G+W+GP VA +LRK A++
Sbjct: 192 QNEIYHRKIISWFGDSPLTLFGLHQLIECGKKSGKKAGDWYGPAVVAHILRKAVEEARHP 251
Query: 132 DWSSIVFHVALDNTLVVNQV-KKLCTTNKRASSNPQWQPLVLVIPLRLGIQDINPVYING 190
D I +VA D T+ + V K C + A N + +++++P+RLG + N Y++
Sbjct: 252 DLQGITIYVAQDCTVYSSDVIDKQCAS--MAPDNTDDKAVIILVPVRLGGERTNADYLDF 309
Query: 191 IKKCYAL 197
+K +L
Sbjct: 310 VKGILSL 316
Score = 130 (50.8 bits), Expect = 7.1e-22, Sum P(2) = 7.1e-22
Identities = 28/81 (34%), Positives = 44/81 (54%)
Query: 228 LGVIGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQDSEKKLDSTYHCPQASRLH 287
+G+IGGKP + YF G+ + +I++DPH Q+ V K+ E T+HCP ++
Sbjct: 320 VGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKDFPLE-----TFHCPSPKKMS 374
Query: 288 ILHMDPSIAVVSQ-RSYSDYK 307
MDPS + R+ D+K
Sbjct: 375 FRKMDPSCTIGFYCRNVQDFK 395
>RGD|1598323 [details] [associations]
symbol:Atg4c "autophagy related 4C, cysteine peptidase"
species:10116 "Rattus norvegicus" [GO:0000045 "autophagic vacuole
assembly" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005576 "extracellular region" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA;ISO] [GO:0006914 "autophagy" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008233 "peptidase activity"
evidence=ISO] [GO:0015031 "protein transport" evidence=IEA]
RGD:1598323 Pfam:PF03416 GO:GO:0005737 GO:GO:0005576 GO:GO:0015031
GO:GO:0000045 GO:GO:0006508 GO:GO:0004197 InterPro:IPR005078
PANTHER:PTHR22624 GeneTree:ENSGT00530000063000 IPI:IPI00763704
Ensembl:ENSRNOT00000011631 Uniprot:F1M3M0
Length = 432
Score = 189 (71.6 bits), Expect = 7.6e-22, Sum P(2) = 7.6e-22
Identities = 65/205 (31%), Positives = 100/205 (48%)
Query: 11 DLEQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQ 70
++E+ R+D SR+W TYR+ F I S LTTD GWGC LR GQM++AQ L+ LGR W
Sbjct: 49 NVEEFRKDFISRIWLTYREEFPQIEASALTTDCGWGCTLRTGQMLLAQGLILHFLGRAWT 108
Query: 71 WNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLA-K 129
W +A L I D T+ +IH+ T + E GE T A L++ + K
Sbjct: 109 W-----PDA-LHIESSDSDSWTSN-TIHKF--TASFEASLSGER-ELRTPAVSLKETSGK 158
Query: 130 Y-DDWS--SIVFHVAL-----DNTLVVNQVKKLCTTNKRASSNP-QWQ-PLVLVIPLRLG 179
+ DD + S ++H + D+ + V + +L K++ W P V+ LR
Sbjct: 159 HPDDHAVQSEIYHRQIISWFGDSPVAVFGLHRLIEFGKKSGKKAGDWYGPAVVAHILRKA 218
Query: 180 IQDINPVYINGIKKCYALPISPVYD 204
+++ + G+ Y VY+
Sbjct: 219 VEEARHPDLQGLT-IYVAQDCTVYN 242
Score = 144 (55.7 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 36/126 (28%), Positives = 66/126 (52%)
Query: 76 KEEAYLK-ILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYD 131
+ E Y + I+ F D A + +H++ G GK G+W+GP VA +LRK A++
Sbjct: 166 QSEIYHRQIISWFGDSPVAVFGLHRLIEFGKKSGKKAGDWYGPAVVAHILRKAVEEARHP 225
Query: 132 DWSSIVFHVALDNTLVVNQVKKLCTTNKRASSNPQWQPLVLVIPLRLGIQDINPVYINGI 191
D + +VA D T+ + V T + A + + + +++++P+RLG + N Y+ +
Sbjct: 226 DLQGLTIYVAQDCTVYNSDVIDKQTDSVTAG-DARDKAVIILVPVRLGGERTNIDYLEFV 284
Query: 192 KKCYAL 197
K +L
Sbjct: 285 KGVLSL 290
Score = 126 (49.4 bits), Expect = 7.6e-22, Sum P(2) = 7.6e-22
Identities = 25/70 (35%), Positives = 39/70 (55%)
Query: 228 LGVIGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQDSEKKLDSTYHCPQASRLH 287
+G+IGGKP + YF G+ + +I++DPH Q+ V K+ E T+HCP ++
Sbjct: 294 VGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKDFPLE-----TFHCPSPKKMS 348
Query: 288 ILHMDPSIAV 297
MDPS +
Sbjct: 349 FRKMDPSCTI 358
>CGD|CAL0001444 [details] [associations]
symbol:orf19.2401 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA]
[GO:0032258 "CVT pathway" evidence=IEA] [GO:0006501 "C-terminal
protein lipidation" evidence=IEA] [GO:0006612 "protein targeting to
membrane" evidence=IEA] [GO:0034727 "piecemeal microautophagy of
nucleus" evidence=IEA] [GO:0000422 "mitochondrion degradation"
evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0016485 "protein processing"
evidence=IEA] [GO:0051697 "protein delipidation" evidence=IEA]
[GO:0000045 "autophagic vacuole assembly" evidence=IEA]
CGD:CAL0001444 Pfam:PF03416 GO:GO:0005737 GO:GO:0015031
GO:GO:0006914 GO:GO:0008234 GO:GO:0006508 eggNOG:NOG239662
KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624 MEROPS:C54.001
EMBL:AACQ01000131 EMBL:AACQ01000130 RefSeq:XP_713234.1
RefSeq:XP_713286.1 ProteinModelPortal:Q59UG3 STRING:Q59UG3
GeneID:3645061 GeneID:3645128 KEGG:cal:CaO19.2401
KEGG:cal:CaO19.9938 Uniprot:Q59UG3
Length = 446
Score = 167 (63.8 bits), Expect = 5.0e-21, Sum P(3) = 5.0e-21
Identities = 51/162 (31%), Positives = 83/162 (51%)
Query: 40 TTDKGWGCMLRCGQMVIAQALLFLHLGRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQ 99
T+D GWGCM+R Q ++A LL L+ K E +I+K+F+D ++P+SIH
Sbjct: 138 TSDAGWGCMIRTSQNLLANTLLKLY----------PKNEP--EIVKLFQDDTSSPFSIHN 185
Query: 100 IALTGASEGKAV--GEWFGPNTVAQVLRKLAK---YD---DWSSI--VFHVALDNTLVVN 149
+ V GEWFGPN + +++LA D D I VF ++ ++ L +
Sbjct: 186 FIRVASLSPLHVKPGEWFGPNAASLSIKRLASELLQDQEIDGIKIPRVF-ISENSDLFDD 244
Query: 150 QVKKLCTTNKRASSNPQWQPLVLVIPLRLGIQDINPVYINGI 191
+++ + K AS ++++ P+RLGI +N Y N I
Sbjct: 245 EIRDVFAKEKNAS-------VLILFPIRLGIDKVNSYYYNSI 279
Score = 124 (48.7 bits), Expect = 5.0e-21, Sum P(3) = 5.0e-21
Identities = 31/85 (36%), Positives = 46/85 (54%)
Query: 227 SLGVIGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQDSEKKLDSTYHCPQASRL 286
S G+ GGKP+ + YF+GY D+I+ DPH Q + ++ +DS YH +RL
Sbjct: 288 SCGIAGGKPSSSFYFLGYEDTDLIYFDPHLPQVV--------ETPINMDS-YHTTNYNRL 338
Query: 287 HILHMDPS----IAVVSQRSYSDYK 307
+I +DPS I V + Y D+K
Sbjct: 339 NISLLDPSMMIGILVTNIDEYIDFK 363
Score = 56 (24.8 bits), Expect = 5.0e-21, Sum P(3) = 5.0e-21
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 19 ITSRLWFTYRKGFVPIGDS 37
I S+LW +YR GF PI S
Sbjct: 83 IESKLWLSYRCGFEPIPKS 101
>UNIPROTKB|K7EP43 [details] [associations]
symbol:ATG4D "Cysteine protease ATG4D" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
InterPro:IPR005078 PANTHER:PTHR22624 HGNC:HGNC:20789 EMBL:AC011461
Ensembl:ENST00000586477 Uniprot:K7EP43
Length = 209
Score = 196 (74.1 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
Identities = 34/61 (55%), Positives = 43/61 (70%)
Query: 11 DLEQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQ 70
D+++ +RD SRLW TYR+ F P+ LT+D GWGCMLR GQM++AQ LL L RDW
Sbjct: 74 DIQRFQRDFVSRLWLTYRRDFPPLPGGCLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDWT 133
Query: 71 W 71
W
Sbjct: 134 W 134
Score = 61 (26.5 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 76 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGK 109
+E + +I+ F D AP+ +H++ G S GK
Sbjct: 174 QERRHRQIVSWFADHPRAPFGLHRLVELGQSSGK 207
>RGD|1309664 [details] [associations]
symbol:Atg4b "autophagy related 4B, cysteine peptidase"
species:10116 "Rattus norvegicus" [GO:0000045 "autophagic vacuole
assembly" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0004175 "endopeptidase activity" evidence=ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006508 "proteolysis" evidence=ISO]
[GO:0006914 "autophagy" evidence=ISO] [GO:0008152 "metabolic
process" evidence=ISO] [GO:0008233 "peptidase activity"
evidence=ISO] [GO:0008234 "cysteine-type peptidase activity"
evidence=ISO] [GO:0010508 "positive regulation of autophagy"
evidence=ISO] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IMP] RGD:1309664 Pfam:PF03416 GO:GO:0005737
GO:GO:0015031 GO:GO:0000045 GO:GO:0008234 GO:GO:0006508
GO:GO:0045732 eggNOG:NOG239662 HOGENOM:HOG000007008 KO:K08342
InterPro:IPR005078 PANTHER:PTHR22624 HOVERGEN:HBG050536
MEROPS:C54.003 CTD:23192 OrthoDB:EOG4JWVDK IPI:IPI00363207
EMBL:BC098833 RefSeq:NP_001020882.1 UniGene:Rn.163086
ProteinModelPortal:Q4KM36 SMR:Q4KM36 STRING:Q4KM36
PhosphoSite:Q4KM36 PRIDE:Q4KM36 GeneID:316640 KEGG:rno:316640
UCSC:RGD:1309664 InParanoid:Q4KM36 NextBio:671122
ArrayExpress:Q4KM36 Genevestigator:Q4KM36 Uniprot:Q4KM36
Length = 224
Score = 185 (70.2 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 209 LSSTYNMQTPRYEFTFPQSLGVIGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQ 268
++ Y ++T ++ F PQSLGVIGGKPN A YFIGYVG ++I+LDPHT Q V +
Sbjct: 66 INEAY-VETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQP--AV--ELT 120
Query: 269 DSEKKLDSTYHCPQAS-RLHILHMDPSIAV 297
DS D ++HC R+ I +DPSIAV
Sbjct: 121 DSCFIPDESFHCQHPPCRMGIGELDPSIAV 150
Score = 113 (44.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 167 WQPLVLVIPLRLGIQDINPVYINGIKKCYALPIS 200
W+PLVL+IPLRLG+ DIN Y+ +K C+ +P S
Sbjct: 50 WRPLVLLIPLRLGLTDINEAYVETLKHCFMMPQS 83
Score = 47 (21.6 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 6/14 (42%), Positives = 13/14 (92%)
Query: 142 LDNTLVVNQVKKLC 155
+DNT+V+ ++++LC
Sbjct: 1 MDNTVVMEEIRRLC 14
>UNIPROTKB|K7ESM7 [details] [associations]
symbol:ATG4D "Cysteine protease ATG4D" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
InterPro:IPR005078 PANTHER:PTHR22624 HGNC:HGNC:20789 EMBL:AC011461
Ensembl:ENST00000587256 Uniprot:K7ESM7
Length = 203
Score = 144 (55.7 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 33/118 (27%), Positives = 61/118 (51%)
Query: 76 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKYDDWSS 135
+E + +I+ F D AP+ +H++ G S GK G+W + + V R
Sbjct: 48 QERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWKAVESCSDVTR---------- 97
Query: 136 IVFHVALDNTLVVNQVKKLCTTNKRASSNPQWQPLVLVIPLRLGIQDINPVYINGIKK 193
+V +V+ D T+ V +L R +W+ +V+++P+RLG + +NPVY+ +K+
Sbjct: 98 LVVYVSQDCTVYKADVARLVA---RPDPTAEWKSVVILVPVRLGGETLNPVYVPCVKE 152
Score = 107 (42.7 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 17/28 (60%), Positives = 24/28 (85%)
Query: 228 LGVIGGKPNHALYFIGYVGNDVIFLDPH 255
LG++GGKP H+LYFIGY + +++LDPH
Sbjct: 160 LGIMGGKPRHSLYFIGYQDDFLLYLDPH 187
>UNIPROTKB|K7ERK1 [details] [associations]
symbol:ATG4D "Cysteine protease ATG4D" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
InterPro:IPR005078 PANTHER:PTHR22624 HGNC:HGNC:20789 EMBL:AC011461
Ensembl:ENST00000588857 Uniprot:K7ERK1
Length = 334
Score = 196 (74.1 bits), Expect = 9.0e-17, Sum P(2) = 9.0e-17
Identities = 34/61 (55%), Positives = 43/61 (70%)
Query: 11 DLEQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQ 70
D+++ +RD SRLW TYR+ F P+ LT+D GWGCMLR GQM++AQ LL L RDW
Sbjct: 108 DIQRFQRDFVSRLWLTYRRDFPPLPGGCLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDWT 167
Query: 71 W 71
W
Sbjct: 168 W 168
Score = 61 (26.5 bits), Expect = 9.0e-17, Sum P(2) = 9.0e-17
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 76 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGK 109
+E + +I+ F D AP+ +H++ G S GK
Sbjct: 208 QERRHRQIVSWFADHPRAPFGLHRLVELGQSSGK 241
>UNIPROTKB|C9J1C1 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 GO:GO:0045732 InterPro:IPR005078 PANTHER:PTHR22624
OrthoDB:EOG4JWVDK EMBL:AC133528 HGNC:HGNC:20790 ChiTaRS:ATG4B
IPI:IPI00892755 ProteinModelPortal:C9J1C1 SMR:C9J1C1 STRING:C9J1C1
Ensembl:ENST00000419606 ArrayExpress:C9J1C1 Bgee:C9J1C1
Uniprot:C9J1C1
Length = 66
Score = 195 (73.7 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 35/66 (53%), Positives = 47/66 (71%)
Query: 48 MLRCGQMVIAQALLFLHLGRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGAS 106
MLRCGQM+ AQAL+ HLGRDW+W ++ ++Y +L F DR+ + YSIHQIA G
Sbjct: 1 MLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVG 60
Query: 107 EGKAVG 112
EGK++G
Sbjct: 61 EGKSIG 66
>UNIPROTKB|K7GQT4 [details] [associations]
symbol:LOC100156732 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0015031 "protein transport" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
InterPro:IPR005078 PANTHER:PTHR22624 GeneTree:ENSGT00530000063000
EMBL:CU463012 Ensembl:ENSSSCT00000032915 Uniprot:K7GQT4
Length = 158
Score = 110 (43.8 bits), Expect = 4.8e-15, Sum P(3) = 4.8e-15
Identities = 20/38 (52%), Positives = 28/38 (73%)
Query: 156 TTNKRASS-NPQWQPLVLVIPLRLGIQDINPVYINGIK 192
T +K S+ P W+PL+L++PLRLGI INPVY++ K
Sbjct: 84 TQSKGPSACRPAWKPLLLIVPLRLGINQINPVYVDAFK 121
Score = 76 (31.8 bits), Expect = 4.8e-15, Sum P(3) = 4.8e-15
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 68 DWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQI 100
DW W ++ + Y +IL+ F DR+ YSIHQ+
Sbjct: 25 DWNWEKQKEQPKEYQRILQCFLDRKDCCYSIHQM 58
Score = 70 (29.7 bits), Expect = 4.8e-15, Sum P(3) = 4.8e-15
Identities = 12/17 (70%), Positives = 15/17 (88%)
Query: 18 DITSRLWFTYRKGFVPI 34
DI++RLWFTYR+ F PI
Sbjct: 8 DISARLWFTYRRKFSPI 24
>UNIPROTKB|A6NGQ4 [details] [associations]
symbol:ATG4C "Cysteine protease ATG4C" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624 EMBL:AC103923
HGNC:HGNC:16040 ChiTaRS:ATG4C EMBL:AC099794 EMBL:AC119425
IPI:IPI00793245 ProteinModelPortal:A6NGQ4 SMR:A6NGQ4 STRING:A6NGQ4
Ensembl:ENST00000371118 ArrayExpress:A6NGQ4 Bgee:A6NGQ4
Uniprot:A6NGQ4
Length = 189
Score = 190 (71.9 bits), Expect = 8.3e-15, P = 8.3e-15
Identities = 45/105 (42%), Positives = 62/105 (59%)
Query: 11 DLEQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQ 70
++E+ R+D SR+W TYR+ F I S LTTD GWGC LR GQM++AQ L+ LGR W
Sbjct: 75 NVEEFRKDFISRIWLTYREEFPQIEGSALTTDCGWGCTLRTGQMLLAQGLILHFLGRAWT 134
Query: 71 W----NV-NSKEEAYLK-ILKMFEDRRTAPYSIHQIALTGASEGK 109
W N+ NS E++ +K F TA + + +L+G E K
Sbjct: 135 WPDALNIENSDSESWTSHTVKKF----TASF---EASLSGEREFK 172
>UNIPROTKB|C9JC51 [details] [associations]
symbol:ATG4C "Cysteine protease ATG4C" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624 EMBL:AC103923
HGNC:HGNC:16040 ChiTaRS:ATG4C EMBL:AC099794 EMBL:AC119425
IPI:IPI00644762 ProteinModelPortal:C9JC51 SMR:C9JC51 STRING:C9JC51
Ensembl:ENST00000443289 HOGENOM:HOG000213741 ArrayExpress:C9JC51
Bgee:C9JC51 Uniprot:C9JC51
Length = 151
Score = 189 (71.6 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 37/75 (49%), Positives = 49/75 (65%)
Query: 11 DLEQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLHLGRDWQ 70
++E+ R+D SR+W TYR+ F I S LTTD GWGC LR GQM++AQ L+ LGR W
Sbjct: 75 NVEEFRKDFISRIWLTYREEFPQIEGSALTTDCGWGCTLRTGQMLLAQGLILHFLGRAWT 134
Query: 71 W----NV-NSKEEAY 80
W N+ NS E++
Sbjct: 135 WPDALNIENSDSESW 149
>UNIPROTKB|H7C2A6 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624 EMBL:AC133528
HGNC:HGNC:20790 ChiTaRS:ATG4B ProteinModelPortal:H7C2A6
Ensembl:ENST00000428861 Bgee:H7C2A6 Uniprot:H7C2A6
Length = 193
Score = 187 (70.9 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 43/90 (47%), Positives = 57/90 (63%)
Query: 209 LSSTYNMQTPRYEFTFPQSLGVIGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQ 268
++ Y ++T ++ F PQSLGVIGGKPN A YFIGYVG ++I+LDPHT Q V +
Sbjct: 72 INEAY-VETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQP--AV--EPT 126
Query: 269 DSEKKLDSTYHCPQAS-RLHILHMDPSIAV 297
D D ++HC R+ I +DPSIAV
Sbjct: 127 DGCFIPDESFHCQHPPCRMSIAELDPSIAV 156
Score = 113 (44.8 bits), Expect = 0.00014, P = 0.00014
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 167 WQPLVLVIPLRLGIQDINPVYINGIKKCYALPIS 200
W+PLVL+IPLRLG+ DIN Y+ +K C+ +P S
Sbjct: 56 WRPLVLLIPLRLGLTDINEAYVETLKHCFMMPQS 89
>POMBASE|SPAC19B12.08 [details] [associations]
symbol:atg4 "Atg8 deconjugator Atg4 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000045 "autophagic
vacuole assembly" evidence=ISO] [GO:0004197 "cysteine-type
endopeptidase activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IMP]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IMP] [GO:0016236 "macroautophagy" evidence=IC] [GO:0016485
"protein processing" evidence=ISO] [GO:0032258 "CVT pathway"
evidence=ISO] PomBase:SPAC19B12.08 Pfam:PF03416 GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0000045
GO:GO:0006508 GO:GO:0016485 GO:GO:0006995 GO:GO:0032258
GO:GO:0004197 eggNOG:NOG239662 KO:K08342 InterPro:IPR005078
PANTHER:PTHR22624 HOGENOM:HOG000034155 OrthoDB:EOG470XRS
RefSeq:NP_594771.1 ProteinModelPortal:Q9P373 STRING:Q9P373
MEROPS:C54.A07 EnsemblFungi:SPAC19B12.08.1 GeneID:2542182
KEGG:spo:SPAC19B12.08 OMA:MELMARF NextBio:20803253 Uniprot:Q9P373
Length = 320
Score = 153 (58.9 bits), Expect = 9.5e-14, Sum P(2) = 9.5e-14
Identities = 45/155 (29%), Positives = 73/155 (47%)
Query: 3 HANKLSHQDL-EQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALL 61
H+ K+ E+ D S + TYR G G +T+D GWGCM+R Q ++A L
Sbjct: 31 HSYKIEDSQWPEKFLYDSFSLITITYRSGIE--GLENMTSDTGWGCMIRSTQTLLANCLR 88
Query: 62 FLHLGRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKA-VGEWFGPNTV 120
+ E+ +IL +F D +AP+SIHQ G + G+WFGP T
Sbjct: 89 ICY-----------PEKQLKEILALFADEPSAPFSIHQFVTMGKTLCDINPGQWFGPTTS 137
Query: 121 AQVLRKLAKYDDWSSIVFHVALD-NTLVVNQVKKL 154
+ +L+ + + +VA + N + +Q+ K+
Sbjct: 138 CSCVARLSDQNPDVPLHVYVARNGNAIYRDQLSKV 172
Score = 120 (47.3 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 37/123 (30%), Positives = 61/123 (49%)
Query: 78 EAYLK-ILKMFEDRRTAPYSIHQIALTGASEGKA-VGEWFGPNTVAQVLRKLAKYDDWSS 135
E LK IL +F D +AP+SIHQ G + G+WFGP T + +L+ +
Sbjct: 93 EKQLKEILALFADEPSAPFSIHQFVTMGKTLCDINPGQWFGPTTSCSCVARLSDQNPDVP 152
Query: 136 IVFHVALD-NTLVVNQVKKLCTTNKRASSNPQWQPLVLVIPLRLGIQDINPVYINGIKKC 194
+ +VA + N + +Q+ K+ P++L+IP RLGI IN Y + + +
Sbjct: 153 LHVYVARNGNAIYRDQLSKVSF------------PVLLLIPTRLGIDSINESYYDQLLQV 200
Query: 195 YAL 197
+ +
Sbjct: 201 FEI 203
Score = 86 (35.3 bits), Expect = 9.5e-14, Sum P(2) = 9.5e-14
Identities = 28/123 (22%), Positives = 53/123 (43%)
Query: 174 IPLRLGI-QDINPVYINGIKKCY--ALPISPVYDMVKILSSTYNMQTPRYEFTFPQSLGV 230
+PL + + ++ N +Y + + K L + P + ++ +Y Q + F +G+
Sbjct: 151 VPLHVYVARNGNAIYRDQLSKVSFPVLLLIPTRLGIDSINESYYDQLLQV-FEIRSFVGI 209
Query: 231 IGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQDSEKKLDSTYHCPQASRLHILH 290
GG+P A YF +LDPH C + ++ + T+H R+ I
Sbjct: 210 TGGRPRSAHYFYARQNQYFFYLDPH------CTHFAHTTTQPASEETFHSATLRRVAIQD 263
Query: 291 MDP 293
+DP
Sbjct: 264 LDP 266
>UNIPROTKB|K7EPJ0 [details] [associations]
symbol:ATG4D "ATG4 autophagy related 4 homolog D (S.
cerevisiae), isoform CRA_b" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] Pfam:PF03416 EMBL:CH471106 InterPro:IPR005078
PANTHER:PTHR22624 HGNC:HGNC:20789 EMBL:AC011461
Ensembl:ENST00000588667 Uniprot:K7EPJ0
Length = 228
Score = 180 (68.4 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 33/62 (53%), Positives = 44/62 (70%)
Query: 11 DLEQIRRDITSRLWFTYRKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALL--FLHLGRD 68
D+++ +RD SRLW TYR+ F P+ LT+D GWGCMLR GQM++AQ LL FL G+
Sbjct: 108 DIQRFQRDFVSRLWLTYRRDFPPLPGGCLTSDCGWGCMLRSGQMMLAQGLLLHFLPRGKP 167
Query: 69 WQ 70
W+
Sbjct: 168 WR 169
>UNIPROTKB|K7GSY8 [details] [associations]
symbol:LOC100156732 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0015031 "protein transport" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
InterPro:IPR005078 PANTHER:PTHR22624 GeneTree:ENSGT00530000063000
EMBL:CU463012 Ensembl:ENSSSCT00000035950 Uniprot:K7GSY8
Length = 110
Score = 76 (31.8 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 68 DWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQI 100
DW W ++ + Y +IL+ F DR+ YSIHQ+
Sbjct: 25 DWNWEKQKEQPKEYQRILQCFLDRKDCCYSIHQM 58
Score = 73 (30.8 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 156 TTNKRASS-NPQWQPLVLVIPLRLGI 180
T +K S+ P W+PL+L++PLRLGI
Sbjct: 84 TQSKGPSACRPAWKPLLLIVPLRLGI 109
Score = 70 (29.7 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 12/17 (70%), Positives = 15/17 (88%)
Query: 18 DITSRLWFTYRKGFVPI 34
DI++RLWFTYR+ F PI
Sbjct: 8 DISARLWFTYRRKFSPI 24
>UNIPROTKB|Q969K0 [details] [associations]
symbol:ATG4D "Cysteine protease ATG4D" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 EMBL:CH471106 KO:K08342 InterPro:IPR005078
PANTHER:PTHR22624 RefSeq:NP_116274.3 UniGene:Hs.512799 DNASU:84971
GeneID:84971 KEGG:hsa:84971 CTD:84971 HGNC:HGNC:20789
PharmGKB:PA134907475 GenomeRNAi:84971 NextBio:75518 EMBL:AC011461
EMBL:BC007639 EMBL:BC016845 IPI:IPI01010164 SMR:Q969K0
STRING:Q969K0 Ensembl:ENST00000540862 UCSC:uc010dxj.3
Uniprot:Q969K0
Length = 141
Score = 120 (47.3 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 27/67 (40%), Positives = 39/67 (58%)
Query: 231 IGGKPNHALYFIGYVGNDVIFLDPHTNQNIGCVYDKEQDSEKKLDSTYHCPQASRLHILH 290
+GGKP H+LYFIGY + +++LDPH Q D Q ++ L+S +HC ++
Sbjct: 1 MGGKPRHSLYFIGYQDDFLLYLDPHYCQP---TVDVSQ-ADFPLES-FHCTSPRKMAFAK 55
Query: 291 MDPSIAV 297
MDPS V
Sbjct: 56 MDPSCTV 62
>UNIPROTKB|H7BZW5 [details] [associations]
symbol:ATG4C "Cysteine protease ATG4C" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624 EMBL:AC103923
HGNC:HGNC:16040 ChiTaRS:ATG4C EMBL:AC099794 EMBL:AC119425
ProteinModelPortal:H7BZW5 PRIDE:H7BZW5 Ensembl:ENST00000414558
Bgee:H7BZW5 Uniprot:H7BZW5
Length = 110
Score = 89 (36.4 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 228 LGVIGGKPNHALYFIGYVGNDVIFLDPHTNQN 259
+G+IGGKP + YF G+ + +I++DPH Q+
Sbjct: 64 VGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQS 95
Score = 50 (22.7 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 10/36 (27%), Positives = 21/36 (58%)
Query: 162 SSNPQWQPLVLVIPLRLGIQDINPVYINGIKKCYAL 197
S N + +++++P+RLG + N Y+ +K +L
Sbjct: 25 SDNADDKAVIILVPVRLGGERTNTDYLEFVKGILSL 60
>UNIPROTKB|K7EMB9 [details] [associations]
symbol:ATG4D "Cysteine protease ATG4D" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
InterPro:IPR005078 PANTHER:PTHR22624 HGNC:HGNC:20789 EMBL:AC011461
Ensembl:ENST00000589753 Uniprot:K7EMB9
Length = 67
Score = 110 (43.8 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 28 RKGFVPIGDSGLTTDKGWGCMLRCGQMVIAQALLFLH 64
R+ F P+ LT+D GWGCMLR GQM++AQ LL LH
Sbjct: 1 RRDFPPLPGGCLTSDCGWGCMLRSGQMMLAQGLL-LH 36
>UNIPROTKB|K7EN30 [details] [associations]
symbol:ATG4D "Cysteine protease ATG4D" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
InterPro:IPR005078 PANTHER:PTHR22624 HGNC:HGNC:20789 EMBL:AC011461
Ensembl:ENST00000588972 Uniprot:K7EN30
Length = 177
Score = 85 (35.0 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 228 LGVIGGKPNHALYFIGYVG 246
LG++GGKP H+LYFIGY G
Sbjct: 11 LGIMGGKPRHSLYFIGYQG 29
Score = 57 (25.1 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 249 VIFLDPHTNQNIGCVYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAV 297
+++LDPH Q D Q ++ L+S +HC ++ MDPS V
Sbjct: 55 LLYLDPHYCQP---TVDVSQ-ADFPLES-FHCTSPRKMAFAKMDPSCTV 98
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.137 0.428 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 309 309 0.00079 116 3 11 22 0.37 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 77
No. of states in DFA: 618 (66 KB)
Total size of DFA: 246 KB (2132 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.26u 0.08s 23.34t Elapsed: 00:00:13
Total cpu time: 23.28u 0.09s 23.37t Elapsed: 00:00:13
Start: Thu Aug 15 15:41:37 2013 End: Thu Aug 15 15:41:50 2013