BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10467
(304 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|193643553|ref|XP_001946497.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like
[Acyrthosiphon pisum]
Length = 518
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 112/202 (55%), Gaps = 46/202 (22%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S +D + AL++ + +MG+RYIE++
Sbjct: 98 GRPSGEAYVEMESEEDLKAALKKDREHMGNRYIEVF------------------------ 133
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
R+KRSEM+W +K+ G+ L S +D C+RL+GLP+ K+D+
Sbjct: 134 ------------------RSKRSEMEWVIKKTGSTLD-SVLDDNCVRLRGLPFGSTKDDI 174
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+F +GLE+ P+GITI D+ GR TG A++QFVD+ENAEKAL +HKEKIGHR + + S
Sbjct: 175 VQFFQGLEMTPDGITIATDFTGRSTGEAFVQFVDRENAEKALQKHKEKIGHRYIEIFRSS 234
Query: 220 AQWFLSPPLT---NETPISRLD 238
+ L +TP R+D
Sbjct: 235 LAEIRNQALQRRPRQTPYDRMD 256
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 42/58 (72%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF+P+ PV+I +L ++ R SGEA+VEF + +DA RA+ + K+ M RYIEL+M+
Sbjct: 361 IATFFEPLEPVDIRILFNNNNRPSGEANVEFGNKEDAMRAMSKDKTYMQHRYIELFMD 418
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF+ + P I + TD GRS+GEA V+F ++A++ALQ+HK +G RYIE++
Sbjct: 176 QFFQGLEMTPDGITIATDFTGRSTGEAFVQFVDRENAEKALQKHKEKIGHRYIEIF 231
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+ ++GLP++ ++D+ F E LE P I I + R +G A ++F +KE+A +A+ +
Sbjct: 346 VVHMRGLPFKANEDDIATFFEPLE--PVDIRILFNNNNRPSGEANVEFGNKEDAMRAMSK 403
Query: 204 HKEKIGHRLVTLVMS 218
K + HR + L M
Sbjct: 404 DKTYMQHRYIELFMD 418
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 144 CMRLQGLPYECKKEDVEKFLE--GLEIVPNGITIPH---DYAGRCTGVAYIQFVDKENAE 198
++++GLP+ +D+ KFL G V +G H GR +G AY++ +E+ +
Sbjct: 56 VVKMRGLPWSATADDIIKFLSILGEAKVKDGAAGVHLTMAREGRPSGEAYVEMESEEDLK 115
Query: 199 KALLRHKEKIGHRLVTLVMS 218
AL + +E +G+R + + S
Sbjct: 116 AALKKDREHMGNRYIEVFRS 135
>gi|340722803|ref|XP_003399791.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein H-like [Bombus terrestris]
gi|350424200|ref|XP_003493719.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein H-like [Bombus impatiens]
Length = 414
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 105/180 (58%), Gaps = 43/180 (23%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE +++D ++A +R + +MG RYIE++
Sbjct: 53 GRPSGEAYVEMDTLEDIEKACKRDRDHMGHRYIEVF------------------------ 88
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
+AKR EM+W +KR G L +A+D C+RL+GLP+ C KE++
Sbjct: 89 ------------------KAKRGEMEWVVKRSGMNLE-NAMDDGCVRLRGLPFGCSKEEI 129
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+F GLEI+PNGI++P DY GR TG AY+QFV+K+ AE+AL +HKEKIGHR T ++G
Sbjct: 130 AQFFSGLEILPNGISLPTDYTGRSTGEAYVQFVNKDVAERALQKHKEKIGHRWGTDXLAG 189
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 107/242 (44%), Gaps = 47/242 (19%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDR-------- 70
+QFF I+P I L TD GRS+GEA V+F + D A+RALQ+HK +G R
Sbjct: 130 AQFFSGLEILPNGISLPTDYTGRSTGEAYVQFVNKDVAERALQKHKEKIGHRWGTDXLAG 189
Query: 71 --YIELYMEEGTSSKEANG---RG--TGGFGGVKSTPYGVGI-FCISQFLAKWMRRAKRS 122
YIE++ + + + G RG GGF + PY G F + R ++
Sbjct: 190 FGYIEIFRSSLSEVRASIGPKMRGGPMGGF-NQRPAPYDRGSRFGGMNRFSNNSRGSRNR 248
Query: 123 EMD---WA-----------------LKRQGAVLSGSAVDQC------CMRLQGLPYECKK 156
+ D W L +G GS + ++GLP++ +
Sbjct: 249 DFDGGPWGSGNNFDSRGGSMGMRGGLDMKGGNFRGSGDTWGGNSGIHSIHMRGLPFKATE 308
Query: 157 EDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLV 216
+D+ F +E P + I + GR +G A ++F E A KA+ + K + HR + L
Sbjct: 309 QDIADFFRPIE--PVNVRIILENGGRPSGEADVEFATHEEAVKAMSKDKSHMSHRYIELF 366
Query: 217 MS 218
++
Sbjct: 367 LN 368
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 136 SGSAVDQC-CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFV 192
SG D+ ++L+GLP+ +++ KF I NG+ + GR +G AY++
Sbjct: 5 SGDHDDEGYVVKLRGLPWSTTVDEIMKFFSDCSITNGKNGVHMTMSREGRPSGEAYVEMD 64
Query: 193 DKENAEKALLRHKEKIGHRLVTL 215
E+ EKA R ++ +GHR + +
Sbjct: 65 TLEDIEKACKRDRDHMGHRYIEV 87
>gi|380029403|ref|XP_003698363.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein H-like [Apis florea]
Length = 413
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 105/180 (58%), Gaps = 43/180 (23%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE +++D ++A +R + +MG RYIE++
Sbjct: 53 GRPSGEAYVEMDTLEDIEKACKRDRDHMGHRYIEVF------------------------ 88
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
+AKR EM+W +KR G L +A+D C+RL+GLP+ C KE++
Sbjct: 89 ------------------KAKRGEMEWVVKRSGMNLE-NAMDDGCVRLRGLPFGCSKEEI 129
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+F GLEI+PNGI++P DY GR TG AY+QFV+K+ AE+AL +HKEKIGHR T ++G
Sbjct: 130 AQFFSGLEILPNGISLPTDYTGRSTGEAYVQFVNKDVAERALQKHKEKIGHRWGTDXLAG 189
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 105/240 (43%), Gaps = 44/240 (18%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDR-------- 70
+QFF I+P I L TD GRS+GEA V+F + D A+RALQ+HK +G R
Sbjct: 130 AQFFSGLEILPNGISLPTDYTGRSTGEAYVQFVNKDVAERALQKHKEKIGHRWGTDXLAG 189
Query: 71 --YIELYMEEGTSSKEANG---RGTGGFGGVKSTPYGVGI-FCISQFLAKWMRRAKRSEM 124
YIE++ + + + G RG G + PY G F + R ++ +
Sbjct: 190 FGYIEIFRSSLSEVRASIGPKMRGPMGGFNQRPAPYDRGSRFGGMNRFSNNSRGSRNRDF 249
Query: 125 D---WA-----------------LKRQGAVLSGSAVDQC------CMRLQGLPYECKKED 158
D W L +G GS + ++GLP++ ++D
Sbjct: 250 DGGPWGSGNNFDSRGGSMGMRGGLDMKGGNFRGSGDTWGGNSGIHSIHMRGLPFKATEQD 309
Query: 159 VEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+ F +E P + I + GR +G A ++F E A KA+ + K + HR + L ++
Sbjct: 310 IADFFRPIE--PVNVRIILENGGRPSGEADVEFATHEEAVKAMSKDKSHMSHRYIELFLN 367
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 136 SGSAVDQC-CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFV 192
SG D+ ++L+GLP+ +++ KF I NG+ + GR +G AY++
Sbjct: 5 SGDHDDEGYVVKLRGLPWSTTVDEIMKFFSDCSITNGKNGVHMTMSREGRPSGEAYVEMD 64
Query: 193 DKENAEKALLRHKEKIGHRLVTL 215
E+ EKA R ++ +GHR + +
Sbjct: 65 TLEDIEKACKRDRDHMGHRYIEV 87
>gi|383858866|ref|XP_003704920.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein H-like [Megachile rotundata]
Length = 412
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 104/180 (57%), Gaps = 43/180 (23%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE + +D ++A +R + +MG RYIE++
Sbjct: 53 GRPSGEAYVEMDTPEDIEKACKRDRDHMGHRYIEVF------------------------ 88
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
+AKR EM+W +KR G L +A+D C+RL+GLP+ C KE++
Sbjct: 89 ------------------KAKRGEMEWVVKRSGFNLE-NAMDDACVRLRGLPFGCSKEEI 129
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+F GLEI+PNGI++P DY GR TG AY+QFV+K+ AE+AL +HKEKIGHR T ++G
Sbjct: 130 AQFFSGLEILPNGISLPTDYTGRSTGEAYVQFVNKDVAERALQKHKEKIGHRWGTDXLAG 189
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 105/240 (43%), Gaps = 46/240 (19%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDR-------- 70
+QFF I+P I L TD GRS+GEA V+F + D A+RALQ+HK +G R
Sbjct: 130 AQFFSGLEILPNGISLPTDYTGRSTGEAYVQFVNKDVAERALQKHKEKIGHRWGTDXLAG 189
Query: 71 --YIELY---MEEGTSSKEANGRGTGGFGGVKSTPYGVGI-FCISQFLAKWMRRAKRSEM 124
YIE++ + E +S RG G + PY G F + R ++ +
Sbjct: 190 FGYIEIFRSTLSEVRASIGPKMRGPMGGFNQRPAPYDRGARFGGMNRFSNNGRGSRNRDF 249
Query: 125 D---WA----------------------LKRQG-AVLSGSAVDQCCMRLQGLPYECKKED 158
D W + G A GS + MR GLP++ ++D
Sbjct: 250 DGGPWGGNNFDSRGGGMGMRGGMDMKGNFRGNGDAWGGGSGIHSIHMR--GLPFKATEQD 307
Query: 159 VEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+ F +E P + I + GR +G A ++F E A KA+ + K + HR + L ++
Sbjct: 308 IADFFRPIE--PVNVRIILENGGRPSGEADVEFATHEEAMKAMSKDKSHMSHRYIELFLN 365
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 136 SGSAVDQC-CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFV 192
SG D+ ++L+GLP+ +++ KF I NG+ + GR +G AY++
Sbjct: 5 SGDHEDEGYVVKLRGLPWSTTVDEIMKFFSDCSISNGKNGVHMTMSREGRPSGEAYVEMD 64
Query: 193 DKENAEKALLRHKEKIGHRLVTL 215
E+ EKA R ++ +GHR + +
Sbjct: 65 TPEDIEKACKRDRDHMGHRYIEV 87
>gi|307203918|gb|EFN82825.1| Heterogeneous nuclear ribonucleoprotein H2 [Harpegnathos saltator]
Length = 388
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 103/179 (57%), Gaps = 43/179 (24%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE + +D ++A +R + +MG RYIE++
Sbjct: 37 GRPSGEAYVEMDTPEDIEKACKRDRDHMGHRYIEVF------------------------ 72
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
+AKR EM+W +KR G L +A+D C+RL+GLP+ C KE++
Sbjct: 73 ------------------KAKRGEMEWVVKRSGLNLE-NAMDDGCVRLRGLPFGCSKEEI 113
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+F GLEI+PNGI++P DY GR TG AY+QFV+K+ AE+AL +HKEKIGHR + + S
Sbjct: 114 AQFFSGLEILPNGISLPTDYTGRSTGEAYVQFVNKDVAERALQKHKEKIGHRYIEIFRS 172
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 37/232 (15%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY--- 75
+QFF I+P I L TD GRS+GEA V+F + D A+RALQ+HK +G RYIE++
Sbjct: 114 AQFFSGLEILPNGISLPTDYTGRSTGEAYVQFVNKDVAERALQKHKEKIGHRYIEIFRSS 173
Query: 76 MEEGTSSKEANGRG--TGGFGGVKSTPYGVGI-FCISQFLAKWMRRAKRSEMDWALKRQG 132
+ E +S RG GGF + PY G F + R ++ + D G
Sbjct: 174 LSEVRASIGPKMRGGPMGGF-NQRPAPYTRGDRFGGMNRFSNNGRGSRNRDFDNGPWGNG 232
Query: 133 AVLS--------------------------GSAVDQCCMRLQGLPYECKKEDVEKFLEGL 166
+ G + ++GLP++ ++D+ F +
Sbjct: 233 SNYGSRGGNMGMRGGMDMKGGNYRGSGDSWGGNSGVHSIHMRGLPFKATEQDIADFFRPI 292
Query: 167 EIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
E P + I + GR +G A ++F E A KA+ + K + HR + L ++
Sbjct: 293 E--PVNVRIILENGGRPSGEADVEFATHEEAVKAMCKDKSHMLHRYIELFLN 342
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
++GLP+ +++ KF I NG+ + GR +G AY++ E+ EKA R
Sbjct: 1 MRGLPWSTTVDEIIKFFADCSISNGKNGVHMTMSREGRPSGEAYVEMDTPEDIEKACKRD 60
Query: 205 KEKIGHRLVTL 215
++ +GHR + +
Sbjct: 61 RDHMGHRYIEV 71
>gi|91094511|ref|XP_971832.1| PREDICTED: similar to Heterogeneous nuclear ribonucleoprotein H
(hnRNP H) [Tribolium castaneum]
gi|270000730|gb|EEZ97177.1| hypothetical protein TcasGA2_TC004364 [Tribolium castaneum]
Length = 379
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 107/201 (53%), Gaps = 48/201 (23%)
Query: 22 QFFKPIVPVN----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+FFK N I + + GR SGEA VEF S DD AL++ + ++G RYIE++
Sbjct: 28 KFFKNCKVFNGKLGIHMTSSREGRPSGEAFVEFESEDDLNSALRKDREHIGSRYIEVF-- 85
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
+ ++EMDW +KR G
Sbjct: 86 ----------------------------------------KVNKAEMDWVIKRSGPTYG- 104
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENA 197
D C+RL+GLP+ C KE++ +F GLEIVPNGIT+ DY+GR +G AY+QFV+KE A
Sbjct: 105 -VNDDGCVRLRGLPFGCSKEEIAQFFTGLEIVPNGITLLTDYSGRSSGEAYVQFVNKEVA 163
Query: 198 EKALLRHKEKIGHRLVTLVMS 218
EKALL+H+EKIGHR + + S
Sbjct: 164 EKALLKHREKIGHRYIEIFRS 184
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 48/71 (67%)
Query: 21 SQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
+ FFKPIVP N+ LL D GR+SGEADVEF+S +DA RA+ + K +M RYIEL++
Sbjct: 305 TDFFKPIVPTNVKLLQDHNGRASGEADVEFASHEDAMRAMSKDKGHMQHRYIELFLNSAG 364
Query: 81 SSKEANGRGTG 91
+ +G TG
Sbjct: 365 ADNGNSGYVTG 375
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 2/57 (3%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
+QFF IVP I LLTD +GRSSGEA V+F + + A++AL +H+ +G RYIE++
Sbjct: 126 AQFFTGLEIVPNGITLLTDYSGRSSGEAYVQFVNKEVAEKALLKHREKIGHRYIEIF 182
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLP++ D+ F + IVP + + D+ GR +G A ++F E+A +A+ +
Sbjct: 289 CVHMRGLPFKATAADITDFFK--PIVPTNVKLLQDHNGRASGEADVEFASHEDAMRAMSK 346
Query: 204 HKEKIGHRLVTLVMSGA 220
K + HR + L ++ A
Sbjct: 347 DKGHMQHRYIELFLNSA 363
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
++L+GLP+ ED+ KF + ++ GI + GR +G A+++F +++ AL
Sbjct: 12 VKLRGLPWSATTEDILKFFKNCKVFNGKLGIHMTSSREGRPSGEAFVEFESEDDLNSALR 71
Query: 203 RHKEKIGHRLVTL 215
+ +E IG R + +
Sbjct: 72 KDREHIGSRYIEV 84
>gi|346473523|gb|AEO36606.1| hypothetical protein [Amblyomma maculatum]
Length = 412
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 100/182 (54%), Gaps = 43/182 (23%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA +E S D + LQRH ++G RYIE++
Sbjct: 52 GRPSGEAYIELESEQDVEVGLQRHNEHIGHRYIEVF------------------------ 87
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++KRSEMDW +KR GA S ++ C+RL+GLP+ C KE++
Sbjct: 88 ------------------KSKRSEMDWVVKRSGAHQQDS-LNDGCVRLRGLPFGCSKEEI 128
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+F GLEIVPNGIT+P DY GR TG A++QF ++ AEKA+ +HKEKIGHR + + S
Sbjct: 129 AQFFSGLEIVPNGITLPTDYQGRSTGEAFVQFATRDIAEKAMGKHKEKIGHRYIEIFKSS 188
Query: 220 AQ 221
Q
Sbjct: 189 LQ 190
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 14/210 (6%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
+QFF IVP I L TD GRS+GEA V+F++ D A++A+ +HK +G RYIE++
Sbjct: 129 AQFFSGLEIVPNGITLPTDYQGRSTGEAFVQFATRDIAEKAMGKHKEKIGHRYIEIFKSS 188
Query: 79 GTSSKEANGRGTGG----FGGVKSTPYGVGIFCISQFLAKWMRRAKRS------EMDWAL 128
+ A G G GG + PY M R R+ E +
Sbjct: 189 LQEVRSAIGMGVPKMMRPMGGARPGPYDRADRFGGGPSRYGMGRGGRNFRGFVEEDGYGG 248
Query: 129 KRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAY 188
+ + + ++GLP+ + D+ +F + + P + + ++ +GR +G
Sbjct: 249 FGGPGGGAHFSATGHFVHMRGLPFRATERDIFEFFQPMN--PVNVHLIYEDSGRPSGECD 306
Query: 189 IQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
++F E A KA+ + K + HR + L ++
Sbjct: 307 VEFATHEEAVKAMSKDKAHMQHRYIELFLN 336
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
+R++GLP+ KE++ F E NG+ + GR +G AYI+ +++ E
Sbjct: 11 VLRIRGLPWSTTKEEILNFFTSKECNIKGGINGVHMTLSREGRPSGEAYIELESEQDVEV 70
Query: 200 ALLRHKEKIGHRLVTLVMS 218
L RH E IGHR + + S
Sbjct: 71 GLQRHNEHIGHRYIEVFKS 89
>gi|346465413|gb|AEO32551.1| hypothetical protein [Amblyomma maculatum]
Length = 434
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 100/182 (54%), Gaps = 43/182 (23%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA +E S D + LQRH ++G RYIE++
Sbjct: 75 GRPSGEAYIELESEQDVEIGLQRHNEHIGHRYIEVF------------------------ 110
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++KRSEMDW +KR GA S ++ C+RL+GLP+ C KE++
Sbjct: 111 ------------------KSKRSEMDWVVKRSGAHQQDS-LNDGCVRLRGLPFGCSKEEI 151
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+F GLEIVPNGIT+P DY GR TG A++QF ++ AEKA+ +HKEKIGHR + + S
Sbjct: 152 AQFFSGLEIVPNGITLPTDYQGRSTGEAFVQFATRDIAEKAMGKHKEKIGHRYIEIFKSS 211
Query: 220 AQ 221
Q
Sbjct: 212 LQ 213
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 34/220 (15%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
+QFF IVP I L TD GRS+GEA V+F++ D A++A+ +HK +G RYIE++
Sbjct: 152 AQFFSGLEIVPNGITLPTDYQGRSTGEAFVQFATRDIAEKAMGKHKEKIGHRYIEIFKSS 211
Query: 79 GTSSKEANG---------RGTG---------GFGGVKSTPYGVGIFCISQFLAKWMRRAK 120
+ A G GTG FGG S YG+G + R +
Sbjct: 212 LQEIRSAVGMGVPKMMRPMGTGRPGPYDRVERFGGGPSR-YGMG---------RGGRNFR 261
Query: 121 RSEMDWALKRQGAVLSGSAVDQCC--MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHD 178
+ G + GS + ++GLP+ + D+ +F + + P + ++
Sbjct: 262 GFVEEDGYGDFGGSVGGSHFSATGHFVHMRGLPFRATERDIFEFFQPMN--PVNVHFIYE 319
Query: 179 YAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+GR +G ++F E A KA+ + K + HR + L ++
Sbjct: 320 DSGRPSGECDVEFATHEEAVKAMSKDKAHMQHRYIELFLN 359
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEI----VPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
+R++GLP+ KE++ F E NG+ + GR +G AYI+ +++ E
Sbjct: 34 VLRIRGLPWSTTKEEILNFFTSKECHIKGGINGVHMTLSREGRPSGEAYIELESEQDVEI 93
Query: 200 ALLRHKEKIGHRLVTLVMS 218
L RH E IGHR + + S
Sbjct: 94 GLQRHNEHIGHRYIEVFKS 112
>gi|427789699|gb|JAA60301.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 411
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 100/182 (54%), Gaps = 43/182 (23%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA +E S D + LQRH ++G RYIE++
Sbjct: 52 GRPSGEAYIELESEQDMEIGLQRHNEHIGHRYIEVF------------------------ 87
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++KRSEMDW +KR GA S ++ C+RL+GLP+ C KE++
Sbjct: 88 ------------------KSKRSEMDWVVKRSGAHQQDS-LNDGCVRLRGLPFGCSKEEI 128
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+F GLEIVPNGIT+P DY GR TG A++QF ++ AEKA+ +HKEKIGHR + + S
Sbjct: 129 AQFFSGLEIVPNGITLPTDYQGRSTGEAFVQFATRDIAEKAMGKHKEKIGHRYIEIFKSS 188
Query: 220 AQ 221
Q
Sbjct: 189 LQ 190
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
+QFF IVP I L TD GRS+GEA V+F++ D A++A+ +HK +G RYIE++
Sbjct: 129 AQFFSGLEIVPNGITLPTDYQGRSTGEAFVQFATRDIAEKAMGKHKEKIGHRYIEIFKSS 188
Query: 79 GTSSKEANGRGTGG----FGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAV 134
+ A G G G + PY M R R+ + + A
Sbjct: 189 LQEIRSAVGMGVPKMMRPMGSARPGPYDRAERFGGGPSRYGMGRGGRNFRGFVEEDGYAD 248
Query: 135 LSGS------AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAY 188
GS + + ++GLP+ + D+ +F + + P + + ++ +GR +G
Sbjct: 249 FGGSGGGARFSATGHFVHMRGLPFRATERDIFEFFQPMN--PINVHLIYEDSGRPSGECD 306
Query: 189 IQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
++F E A KA+ + K + HR + L ++
Sbjct: 307 VEFATHEEAVKAMSKDKAHMQHRYIELFLN 336
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF+P+ P+N+ L+ +D+GR SGE DVEF++ ++A +A+ + K++M RYIEL++ T
Sbjct: 281 EFFQPMNPINVHLIYEDSGRPSGECDVEFATHEEAVKAMSKDKAHMQHRYIELFLNS-TP 339
Query: 82 SKEANGRGTGGFG 94
S +G GGFG
Sbjct: 340 SGLNSGSNAGGFG 352
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEI----VPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
+R++GLP+ KE++ F E NG+ + GR +G AYI+ +++ E
Sbjct: 11 VLRIRGLPWSTTKEEILNFFTSKECHIKGGINGVHMTLSREGRPSGEAYIELESEQDMEI 70
Query: 200 ALLRHKEKIGHRLVTLVMS 218
L RH E IGHR + + S
Sbjct: 71 GLQRHNEHIGHRYIEVFKS 89
>gi|307176277|gb|EFN65908.1| Heterogeneous nuclear ribonucleoprotein H2 [Camponotus floridanus]
Length = 417
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 102/178 (57%), Gaps = 43/178 (24%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE + +D ++A +R + +MG RYIE++
Sbjct: 53 GRPSGEAYVEMDTPEDIEKACKRDRDHMGHRYIEVF------------------------ 88
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
+AKR EM+W +KR G L +A+D C+RL+GLP+ C KE++
Sbjct: 89 ------------------KAKRGEMEWVVKRSGLNLE-NAMDDGCVRLRGLPFGCSKEEI 129
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVM 217
+F GLEI+PNGI++P DY GR TG AY+QFV+K+ AE+AL +HKEKIGHR T +
Sbjct: 130 AQFFSGLEILPNGISLPTDYTGRSTGEAYVQFVNKDVAERALQKHKEKIGHRWGTETL 187
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 106/245 (43%), Gaps = 51/245 (20%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDR-------- 70
+QFF I+P I L TD GRS+GEA V+F + D A+RALQ+HK +G R
Sbjct: 130 AQFFSGLEILPNGISLPTDYTGRSTGEAYVQFVNKDVAERALQKHKEKIGHRWGTETLYI 189
Query: 71 ----YIELYMEEGTSSKEANG---RG--TGG-------------FGGVK----------- 97
YIE++ + + + G RG GG FGG+
Sbjct: 190 AGFGYIEIFRSSLSEVRASIGPKMRGGPMGGFNQRPAPYTRGDRFGGMNRFSNNGRGSRN 249
Query: 98 ----STPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYE 153
S P+G G S+ MR + + + S V MR GLP++
Sbjct: 250 RDFDSGPWGSGNNYGSRGGNMGMRGGMDMKGNNYRGNNDSWGGNSGVHSIHMR--GLPFK 307
Query: 154 CKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLV 213
++D+ F +E P + I + GR +G A ++F E A KA+ + K + HR +
Sbjct: 308 ATEQDIADFFRPIE--PVNVRIILENGGRPSGEADVEFATHEEAVKAMCKDKSHMSHRYI 365
Query: 214 TLVMS 218
L ++
Sbjct: 366 ELFLN 370
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 136 SGSAVDQC-CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFV 192
SG D+ ++++GLP+ +++ KF I NG+ + GR +G AY++
Sbjct: 5 SGDHEDEGYVVKMRGLPWSTTVDEIMKFFGDCSISNGKNGVHMTMSREGRPSGEAYVEMD 64
Query: 193 DKENAEKALLRHKEKIGHRLVTL 215
E+ EKA R ++ +GHR + +
Sbjct: 65 TPEDIEKACKRDRDHMGHRYIEV 87
>gi|325303152|tpg|DAA34329.1| TPA_inf: splicing factor hnRNP-F [Amblyomma variegatum]
Length = 231
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 99/182 (54%), Gaps = 43/182 (23%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA +E S D + LQRH ++G RYIE++
Sbjct: 52 GRPSGEAYIELESEQDMEIGLQRHNEHIGHRYIEVF------------------------ 87
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++KRSEMDW +KR GA S D C+RL+GLP+ C KE++
Sbjct: 88 ------------------KSKRSEMDWVVKRSGAHQQDSLND-GCVRLRGLPFGCSKEEI 128
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+F GLEIVPNGIT+P DY GR TG A++QF ++ AEKA+ +HKEKIGHR + + S
Sbjct: 129 AQFFSGLEIVPNGITLPTDYQGRSTGEAFVQFATRDIAEKAMGKHKEKIGHRYIEIFKSS 188
Query: 220 AQ 221
Q
Sbjct: 189 LQ 190
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
+QFF IVP I L TD GRS+GEA V+F++ D A++A+ +HK +G RYIE++
Sbjct: 129 AQFFSGLEIVPNGITLPTDYQGRSTGEAFVQFATRDIAEKAMGKHKEKIGHRYIEIF 185
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEI----VPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
+R++GLP+ KE++ F E NG+ + GR +G AYI+ +++ E
Sbjct: 11 VLRIRGLPWSTTKEEILNFFTAKECHIKGGINGVHMTLSREGRPSGEAYIELESEQDMEI 70
Query: 200 ALLRHKEKIGHRLVTLVMS 218
L RH E IGHR + + S
Sbjct: 71 GLQRHNEHIGHRYIEVFKS 89
>gi|321466664|gb|EFX77658.1| hypothetical protein DAPPUDRAFT_198258 [Daphnia pulex]
Length = 397
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/181 (40%), Positives = 100/181 (55%), Gaps = 44/181 (24%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR +GE +E SS +D +RAL +H ++G RYIE++
Sbjct: 47 GRPTGEGYLELSSEEDVERALTKHNEHLGPRYIEVF------------------------ 82
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGA--VLSGSAVDQCCMRLQGLPYECKKE 157
R+KRSEM+W +KR G + S+ D C +RL+GLP+ C KE
Sbjct: 83 ------------------RSKRSEMEWMVKRSGPPNAAAPSSDDDCFVRLRGLPFGCSKE 124
Query: 158 DVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVM 217
++ +F GLEIVPNGIT+P DY+GR TG AYIQF AE+AL +HKEKIGHR + +
Sbjct: 125 EIAQFFTGLEIVPNGITLPTDYSGRSTGEAYIQFATSALAERALEKHKEKIGHRYIEIFR 184
Query: 218 S 218
S
Sbjct: 185 S 185
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 21 SQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
++FF P+ PV I + + GR+SGEADVEF++ +DA RA+ R K NM RYIEL++
Sbjct: 324 AEFFHPLHPVAIHIGYEQ-GRASGEADVEFATHEDAVRAMSRDKCNMQHRYIELFL 378
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 41/57 (71%), Gaps = 2/57 (3%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
+QFF IVP I L TD +GRS+GEA ++F++ A+RAL++HK +G RYIE++
Sbjct: 127 AQFFTGLEIVPNGITLPTDYSGRSTGEAYIQFATSALAERALEKHKEKIGHRYIEIF 183
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAE 198
D +RL+GLP+ +D+ KF E IV GI + + GR TG Y++ +E+ E
Sbjct: 5 DGFVVRLRGLPWAVTDDDILKFFEDSNIVGGAAGIHMTYTREGRPTGEGYLELSSEEDVE 64
Query: 199 KALLRHKEKIGHRLVTLVMS 218
+AL +H E +G R + + S
Sbjct: 65 RALTKHNEHLGPRYIEVFRS 84
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 123 EMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGR 182
E ++ R L G + ++GLP+ ++D+ +F L P I I ++ GR
Sbjct: 287 EQNFERPRTLKTLYGDEGSGHRIHMRGLPFRASEDDIAEFFHPLH--PVAIHIGYE-QGR 343
Query: 183 CTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+G A ++F E+A +A+ R K + HR + L ++
Sbjct: 344 ASGEADVEFATHEDAVRAMSRDKCNMQHRYIELFLN 379
>gi|242007190|ref|XP_002424425.1| Heterogeneous nuclear ribonucleoprotein F, putative [Pediculus
humanus corporis]
gi|212507825|gb|EEB11687.1| Heterogeneous nuclear ribonucleoprotein F, putative [Pediculus
humanus corporis]
Length = 412
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 111/215 (51%), Gaps = 52/215 (24%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE + D + AL++ + MG RY+E++
Sbjct: 49 GRPSGEAYVEMETDQDIEEALKKDRDYMGTRYMEVF------------------------ 84
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++KRSEMDW +KR G+ L +A+D C+RL+GLP+ C KE++
Sbjct: 85 ------------------KSKRSEMDWVIKRSGSNLE-TALDDGCVRLRGLPFGCSKEEI 125
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS- 218
+F GLEIVPNGIT+P D GR TG AY+QF +K+ AEKALL+HKEKI HR + + S
Sbjct: 126 AQFFTGLEIVPNGITLPMDSRGRSTGEAYVQFKNKDIAEKALLKHKEKIAHRYIEIFRSS 185
Query: 219 --------GAQWFLSPPLTNETPISRLDLTGSPVR 245
G + ++ + P D G P R
Sbjct: 186 LGEICQEIGVRRGMTGFMNRPAPYDARDRFGGPNR 220
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 45/57 (78%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
+ FF+P++P++I LLT+D GR SGEADVEF + DDA A+ ++K++M RYIEL++
Sbjct: 318 VADFFRPVIPLSIDLLTEDDGRPSGEADVEFRTHDDAVLAMSKNKNHMQHRYIELFL 374
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
+QFF IVP I L D GRS+GEA V+F + D A++AL +HK + RYIE++
Sbjct: 126 AQFFTGLEIVPNGITLPMDSRGRSTGEAYVQFKNKDIAEKALLKHKEKIAHRYIEIF 182
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLP+ K+DV F ++P I + + GR +G A ++F ++A A+ +
Sbjct: 303 CIHMRGLPFRATKQDVADFFR--PVIPLSIDLLTEDDGRPSGEADVEFRTHDDAVLAMSK 360
Query: 204 HKEKIGHRLVTLVMS 218
+K + HR + L ++
Sbjct: 361 NKNHMQHRYIELFLN 375
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAE 198
D ++++GLP+ E++ KF ++ G+ I GR +G AY++ ++ E
Sbjct: 7 DSYVIKMRGLPWSTTDEEILKFFNNCKVKNGKEGVHIIMTREGRPSGEAYVEMETDQDIE 66
Query: 199 KALLRHKEKIGHRLVTLVMS 218
+AL + ++ +G R + + S
Sbjct: 67 EALKKDRDYMGTRYMEVFKS 86
>gi|322801457|gb|EFZ22118.1| hypothetical protein SINV_07549 [Solenopsis invicta]
Length = 425
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 102/179 (56%), Gaps = 43/179 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ + T GR SGEA VE + +D ++A +R + +MG RYIE++
Sbjct: 45 VHMTTSREGRPSGEAYVEMDTPEDIEKACKRDRDHMGHRYIEVF---------------- 88
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+AKR EM+W +KR G L +A+D C+RL+GLP
Sbjct: 89 --------------------------KAKRGEMEWVVKRSGLNLE-NAMDDGCVRLRGLP 121
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGH 210
+ C KE++ +F GLEI+PNGI++P DY GR TG AY+QFV+K+ AE+AL +HKEKIGH
Sbjct: 122 FGCSKEEIAQFFSGLEILPNGISLPTDYTGRSTGEAYVQFVNKDVAERALQKHKEKIGH 180
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 44/57 (77%)
Query: 21 SQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF+PI PVN+ ++ ++ GR SGEADVEF++ ++A +A+ + KS+M RYIEL+M
Sbjct: 350 ADFFRPIEPVNVRIILENGGRPSGEADVEFATHEEALKAMCKDKSHMSHRYIELFMN 406
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMG 68
+QFF I+P I L TD GRS+GEA V+F + D A+RALQ+HK +G
Sbjct: 130 AQFFSGLEILPNGISLPTDYTGRSTGEAYVQFVNKDVAERALQKHKEKIG 179
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+ ++GLP++ ++D+ F +E P + I + GR +G A ++F E A KA+ +
Sbjct: 335 IHMRGLPFKATEQDIADFFRPIE--PVNVRIILENGGRPSGEADVEFATHEEALKAMCKD 392
Query: 205 KEKIGHRLVTLVMS 218
K + HR + L M+
Sbjct: 393 KSHMSHRYIELFMN 406
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
++++GLP+ +++ KF I NG+ + GR +G AY++ E+ EKA
Sbjct: 15 VKVRGLPWSTTVDEIMKFFGDCSISNGKNGVHMTTSREGRPSGEAYVEMDTPEDIEKACK 74
Query: 203 RHKEKIGHRLVTL 215
R ++ +GHR + +
Sbjct: 75 RDRDHMGHRYIEV 87
>gi|156550801|ref|XP_001600558.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Nasonia
vitripennis]
Length = 563
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 103/187 (55%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA +E S +D ++A +R + +MG RYIE++
Sbjct: 45 IHMTMSREGRPSGEAYIEMDSEEDIEKACKRDRDHMGHRYIEVF---------------- 88
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+AKR EM+W +KR L + +D C+RL+GLP
Sbjct: 89 --------------------------KAKRGEMEWVIKRSCLNLE-NVMDDGCVRLRGLP 121
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEI+PNGI++P DY GR TG AY+QFV+K+ AE+AL +HKEKIGHR
Sbjct: 122 FGCSKEEIAQFFSGLEILPNGISLPTDYTGRSTGEAYVQFVNKDVAERALQKHKEKIGHR 181
Query: 212 LVTLVMS 218
+ + S
Sbjct: 182 YIEIFRS 188
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 45/56 (80%)
Query: 21 SQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
+ FF+P+ P++I ++ ++ GR+SGEADVEF+S ++A +A+ + KS+M RYIEL++
Sbjct: 313 ADFFRPLSPISIRIILENGGRASGEADVEFASHEEAVKAMSKDKSHMSHRYIELFL 368
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
+QFF I+P I L TD GRS+GEA V+F + D A+RALQ+HK +G RYIE++
Sbjct: 130 AQFFSGLEILPNGISLPTDYTGRSTGEAYVQFVNKDVAERALQKHKEKIGHRYIEIF 186
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLP+ ++D+ F L P I I + GR +G A ++F E A KA+ +
Sbjct: 297 CVHMRGLPFRATEQDIADFFRPLS--PISIRIILENGGRASGEADVEFASHEEAVKAMSK 354
Query: 204 HKEKIGHRLVTLVMS 218
K + HR + L ++
Sbjct: 355 DKSHMSHRYIELFLN 369
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
++++GLP+ +++ KF I GI + GR +G AYI+ +E+ EKA
Sbjct: 15 VKVRGLPWSTTVDEIMKFFGDCSITHGKAGIHMTMSREGRPSGEAYIEMDSEEDIEKACK 74
Query: 203 RHKEKIGHRLVTL 215
R ++ +GHR + +
Sbjct: 75 RDRDHMGHRYIEV 87
>gi|405952153|gb|EKC19997.1| Heterogeneous nuclear ribonucleoprotein H [Crassostrea gigas]
Length = 544
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 98/183 (53%), Gaps = 45/183 (24%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGE VE D+ QR L+ H +MG+RYIE++
Sbjct: 83 GRPSGECFVELIDEDNVQRGLKCHNKHMGNRYIEVF------------------------ 118
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQG-AVLSGSAVDQCCMRLQGLPYECKKED 158
R+K+SEMDW +KR G + GS + +RL+GLP+ C KE+
Sbjct: 119 ------------------RSKKSEMDWVIKRAGPGQMPGSC--EAVVRLRGLPFGCSKEE 158
Query: 159 VEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+ +F GLEIVPNGI +P D GR TG AY+QF +E AEKAL +HKE+IGHR + + S
Sbjct: 159 IAQFFTGLEIVPNGIMLPEDRQGRSTGEAYVQFASQEIAEKALSKHKERIGHRYIEIFKS 218
Query: 219 GAQ 221
G Q
Sbjct: 219 GMQ 221
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%)
Query: 21 SQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
+ FF P+ PV + GR +GEA+V+F + DA A+ RHK NM RYIEL++
Sbjct: 406 ADFFSPLTPVRVEFEFAPNGRPTGEANVDFKTHSDAVEAMSRHKKNMQHRYIELFLNSTP 465
Query: 81 SSKE 84
+ ++
Sbjct: 466 TGRQ 469
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
+QFF IVP I+L D GRS+GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 160 AQFFTGLEIVPNGIMLPEDRQGRSTGEAYVQFASQEIAEKALSKHKERIGHRYIEIFKSG 219
Query: 79 GTSSKEANGR--------GTGGFGGVKSTPY 101
++ A G+ G G G + PY
Sbjct: 220 MQEAQNAMGQTPRIRPLMGGSGGGMQRPGPY 250
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFL-EGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENA 197
D C +RL+GLP+ + +V KF E +EIV G+ GR +G +++ +D++N
Sbjct: 40 DGCVVRLRGLPWSATESEVVKFFGEDVEIVDGEQGVHFTFSREGRPSGECFVELIDEDNV 99
Query: 198 EKALLRHKEKIGHRLVTLVMS 218
++ L H + +G+R + + S
Sbjct: 100 QRGLKCHNKHMGNRYIEVFRS 120
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+ ++GLP++ + D+ F L P + GR TG A + F +A +A+ R
Sbjct: 390 SVHMRGLPFQALESDIADFFSPL--TPVRVEFEFAPNGRPTGEANVDFKTHSDAVEAMSR 447
Query: 204 HKEKIGHRLVTLVMS 218
HK+ + HR + L ++
Sbjct: 448 HKKNMQHRYIELFLN 462
>gi|391341907|ref|XP_003745268.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like
[Metaseiulus occidentalis]
Length = 503
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 96/176 (54%), Gaps = 46/176 (26%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR+SGEA VE S D + AL++ NMG+RYIE++
Sbjct: 49 GRASGEAYVELESEPDVENALKKDNENMGNRYIEVF------------------------ 84
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
RAKR+EM+W +K+ S + +D+ +RL+G+P+ C KE++
Sbjct: 85 ------------------RAKRAEMEWCMKKS----SSNTLDEGIVRLRGIPFGCSKEEI 122
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTL 215
F GLEIVPNGI IP D+ GR G AY+QF KE AEKAL +HKE+IGHR + +
Sbjct: 123 ANFFSGLEIVPNGIVIPVDFNGRTAGDAYVQFASKEAAEKALEKHKERIGHRYIEI 178
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ PV++ + + GR SGE DVEFSS DAQ A+ ++ ++MG RY+EL+++ G
Sbjct: 286 DFFAPLRPVSVQFIYEAGGRPSGECDVEFSSHRDAQDAMAKNNAHMGTRYVELFLKSNPG 345
Query: 80 TSSK-EANGRGTGGFGG-VKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
+ SK NG+G F YG G A RS + G
Sbjct: 346 SMSKGHGNGQGHNYFSNEYDEYEYGGGGGGGGGNSGGGGSIAFRSSRNGGFGPSGGHF-- 403
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENA 197
+ ++GLPY+ ++DV +F + I P + D GR +G ++F +A
Sbjct: 404 -------VHMRGLPYKACEDDVFQFFD--PIRPASVRFTFDATGRPSGECDVEFASHRDA 454
Query: 198 EKALLRHKEKIGHRLVTLVM-SGAQ 221
+A+ R+ +G+R V L M S AQ
Sbjct: 455 AEAMERNNAHMGNRYVELFMKSSAQ 479
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
QFF PI P ++ D GR SGE DVEF+S DA A++R+ ++MG+RY+EL+M+
Sbjct: 420 QFFDPIRPASVRFTFDATGRPSGECDVEFASHRDAAEAMERNNAHMGNRYVELFMKSSAQ 479
Query: 82 SK 83
+K
Sbjct: 480 NK 481
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 37/49 (75%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
IVP I++ D GR++G+A V+F+S + A++AL++HK +G RYIE++
Sbjct: 131 IVPNGIVIPVDFNGRTAGDAYVQFASKEAAEKALEKHKERIGHRYIEIF 179
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNG---ITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+RL+G+P+ +DV FL V NG I + GR +G AY++ + + E AL
Sbjct: 10 VRLRGMPWSSTNDDVLNFLGSDVHVLNGKDGIHFTYTRDGRASGEAYVELESEPDVENAL 69
Query: 202 LRHKEKIGHRLVTL 215
+ E +G+R + +
Sbjct: 70 KKDNENMGNRYIEV 83
>gi|291243063|ref|XP_002741419.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H1-like
[Saccoglossus kowalevskii]
Length = 628
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 103/200 (51%), Gaps = 50/200 (25%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGE +E + +D + AL+RH +MG RY+E++
Sbjct: 135 GRPSGECFIELETEEDVKVALERHNDHMGHRYVEVF------------------------ 170
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
R+K+SEMDW +KR G + + C+RL+GLP+ C KE++
Sbjct: 171 ------------------RSKKSEMDWVIKRSGP--NAVQDNDGCVRLRGLPFGCSKEEI 210
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+F GLEIV NGIT+P DY GR TG AY+QF K+ AE AL +HKE+IGHR + + S
Sbjct: 211 AQFFGGLEIVANGITLPTDYHGRSTGEAYVQFSTKDIAENALGKHKERIGHRYIEIFKSS 270
Query: 220 AQWF-----LSP-PLTNETP 233
+ L P PL N P
Sbjct: 271 KEEVRQALGLKPRPLMNNRP 290
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 39/55 (70%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
QFF+P+ P + + + GR++GEADVEF++ +DA + + K++M RYIEL++
Sbjct: 444 QFFQPVNPTKVHIQYESGGRATGEADVEFATHEDAVAGMSKDKAHMQHRYIELFL 498
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 42/66 (63%), Gaps = 6/66 (9%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
+QFF IV I L TD GRS+GEA V+FS+ D A+ AL +HK +G RYIE++
Sbjct: 211 AQFFGGLEIVANGITLPTDYHGRSTGEAYVQFSTKDIAENALGKHKERIGHRYIEIF--- 267
Query: 79 GTSSKE 84
SSKE
Sbjct: 268 -KSSKE 272
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEI--VPNGITIPHDYAGRCTGVAYIQFVDKENAE 198
D +R +GLP+ ++V F +G +I NGI + GR +G +I+ +E+ +
Sbjct: 93 DGNVIRARGLPWSATADEVRSFFKGCKIAETENGIKFTYTREGRPSGECFIELETEEDVK 152
Query: 199 KALLRHKEKIGHRLVTLVMS 218
AL RH + +GHR V + S
Sbjct: 153 VALERHNDHMGHRYVEVFRS 172
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+ ++GLP+ +++ +F + + P + I ++ GR TG A ++F E+A + +
Sbjct: 427 VIHMRGLPFRATDQEIRQFFQ--PVNPTKVHIQYESGGRATGEADVEFATHEDAVAGMSK 484
Query: 204 HKEKIGHRLVTLVMSGAQ 221
K + HR + L ++ +Q
Sbjct: 485 DKAHMQHRYIELFLNSSQ 502
>gi|410912106|ref|XP_003969531.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like [Takifugu
rubripes]
Length = 371
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 99/193 (51%), Gaps = 44/193 (22%)
Query: 27 IVPVNILLLT-DDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEA 85
I VN + T GR SGEA +E + +D + AL + + MG RYIE++
Sbjct: 34 IGKVNGVCFTYSKEGRPSGEAFIELKTAEDFKNALAKDRKYMGHRYIEVF---------- 83
Query: 86 NGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCM 145
++ RSEMDW LKR G S C +
Sbjct: 84 --------------------------------KSNRSEMDWVLKRSGPADYDS-CSGCTL 110
Query: 146 RLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHK 205
RL+GLP+ C KE++ +F GL IVPNGIT+P DY GR TG A++QF KE AEKAL +HK
Sbjct: 111 RLRGLPFGCSKEEIVQFFSGLRIVPNGITLPVDYQGRSTGEAFVQFASKEIAEKALGKHK 170
Query: 206 EKIGHRLVTLVMS 218
E+IGHR + + S
Sbjct: 171 ERIGHRYIEIFKS 183
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 93/215 (43%), Gaps = 22/215 (10%)
Query: 22 QFFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
QFF IVP I L D GRS+GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 126 QFFSGLRIVPNGITLPVDYQGRSTGEAFVQFASKEIAEKALGKHKERIGHRYIEIFKSSR 185
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQF------------LAKWMRRAKRSEMDWA 127
+ G GG + PY + + L + MR
Sbjct: 186 NEIRAYYELPRRGMGGQRPGPYDRPMISGPRGGFFGPGPGRGGSLMEPMRSGGGYGGGMG 245
Query: 128 LKRQGAVLSGSAVDQC--CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYA--GRC 183
G + ++GLP+ + DV KF L N + + D+A G+
Sbjct: 246 GHGYSGQNDGGPGFHSGHFVHMRGLPFRATEGDVAKFFSPL----NPLRVHIDFAPNGKS 301
Query: 184 TGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
TG A ++F E+A A+ + K + HR + L ++
Sbjct: 302 TGEADVEFRSHEDAVAAMSKDKNHMQHRYIELFLN 336
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%)
Query: 21 SQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
++FF P+ P+ + + G+S+GEADVEF S +DA A+ + K++M RYIEL++ +
Sbjct: 280 AKFFSPLNPLRVHIDFAPNGKSTGEADVEFRSHEDAVAAMSKDKNHMQHRYIELFLNSTS 339
Query: 81 SSKEANGR 88
S GR
Sbjct: 340 SGASELGR 347
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVP--NGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+R++GLP+ C +E+V F +I+ NG+ + GR +G A+I+ E+ + AL
Sbjct: 10 VRIRGLPWSCTQEEVAGFFSDCDIIGKVNGVCFTYSKEGRPSGEAFIELKTAEDFKNALA 69
Query: 203 RHKEKIGHRLVTLVMS 218
+ ++ +GHR + + S
Sbjct: 70 KDRKYMGHRYIEVFKS 85
>gi|348534060|ref|XP_003454521.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like
[Oreochromis niloticus]
Length = 401
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 98/190 (51%), Gaps = 44/190 (23%)
Query: 30 VNILLLT-DDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGR 88
VN + T GR SGEA +E + +D + AL + + MG RYIE++
Sbjct: 37 VNGVCFTYSKEGRPSGEAFIELKTAEDFKNALAKDRKYMGHRYIEVF------------- 83
Query: 89 GTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQ 148
++ RSEMDW LKR G S C +RL+
Sbjct: 84 -----------------------------KSNRSEMDWVLKRSGPADYDS-CSGCMLRLR 113
Query: 149 GLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKI 208
GLP+ C KE++ +F GL IVPNGIT+P DY GR TG A++QF KE AEKAL +HKE+I
Sbjct: 114 GLPFGCSKEEIVQFFSGLRIVPNGITLPVDYQGRSTGEAFVQFASKEIAEKALGKHKERI 173
Query: 209 GHRLVTLVMS 218
GHR + + S
Sbjct: 174 GHRYIEIFKS 183
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 93/244 (38%), Gaps = 49/244 (20%)
Query: 22 QFFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
QFF IVP I L D GRS+GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 126 QFFSGLRIVPNGITLPVDYQGRSTGEAFVQFASKEIAEKALGKHKERIGHRYIEIFKSSR 185
Query: 80 TSSKEANGRGTGGFGGVKSTPY-------------------------------------- 101
+ G G + PY
Sbjct: 186 NEIRAYYEVPRRGMGAQRPGPYDRPMMSGPRGGFFGPSPGRGATMMDNMRSGGGYGGGYS 245
Query: 102 ------GVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQC-CMRLQGLPYEC 154
G +C + R +R + G GS + ++GLP+
Sbjct: 246 SFDNYNGFNNYCFGNGMFDERVRGERGGRVGSHGYSGQSDVGSGFHSGHFVHMRGLPFRA 305
Query: 155 KKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVT 214
+ D+ KF L P I I G+ TG A ++F E+A A+ + K + HR +
Sbjct: 306 TEGDIAKFFSPLN--PLRIHIDMAPNGKSTGEADVEFRSHEDAVAAMSKDKNHMQHRYIE 363
Query: 215 LVMS 218
L ++
Sbjct: 364 LFLN 367
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%)
Query: 21 SQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
++FF P+ P+ I + G+S+GEADVEF S +DA A+ + K++M RYIEL++
Sbjct: 311 AKFFSPLNPLRIHIDMAPNGKSTGEADVEFRSHEDAVAAMSKDKNHMQHRYIELFLNSTA 370
Query: 81 S 81
S
Sbjct: 371 S 371
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVP--NGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+R++GLP+ C +++V F +IV NG+ + GR +G A+I+ E+ + AL
Sbjct: 10 VRIRGLPWSCTQDEVASFFSDCDIVGKVNGVCFTYSKEGRPSGEAFIELKTAEDFKNALA 69
Query: 203 RHKEKIGHRLVTLVMS 218
+ ++ +GHR + + S
Sbjct: 70 KDRKYMGHRYIEVFKS 85
>gi|16876910|gb|AAH16736.1| HNRPF protein [Homo sapiens]
Length = 415
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 102/192 (53%), Gaps = 46/192 (23%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S DD + AL++ + +MG RYIE++
Sbjct: 51 GRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVF------------------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
R+ R+EMDW LK G + SA D +RL+GLP+ C KE++
Sbjct: 87 ------------------RSHRTEMDWVLKHSGPNSADSAND-GFVRLRGLPFGCTKEEI 127
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+F GLEIVPNGIT+P D G+ TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 128 VQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSS 187
Query: 220 AQW---FLSPPL 228
+ + PPL
Sbjct: 188 QEEVRSYSDPPL 199
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++ T
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTG 366
Query: 82 SKEA 85
+
Sbjct: 367 ASNG 370
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D G+ +GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVF 184
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
++L+GLP+ C EDV+ FL I G+ + GR +G A+++ +++ + AL
Sbjct: 13 VKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMALK 72
Query: 203 RHKEKIGHRLVTLVMS 218
+ +E +GHR + + S
Sbjct: 73 KDRESMGHRYIEVFRS 88
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY+ + D+ F L V I I D GR TG A ++F E A A+ +
Sbjct: 290 CVHMRGLPYKATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEEAVAAMSK 347
Query: 204 HKEKIGHRLVTLVMS 218
+ + HR + L ++
Sbjct: 348 DRANMQHRYIELFLN 362
>gi|432852531|ref|XP_004067294.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like [Oryzias
latipes]
Length = 398
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 94/179 (52%), Gaps = 43/179 (24%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA +E + +D + AL + + MG RYIE++
Sbjct: 48 GRPSGEAFLELKTAEDFKNALAKDRKYMGHRYIEVF------------------------ 83
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ RSEMDW LKR G S C +RL+GLP+ C KE++
Sbjct: 84 ------------------KSNRSEMDWVLKRNGPADYDS-CSGCMLRLRGLPFGCSKEEI 124
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+F GL IVPNGIT+P DY GR TG A++QF KE AEKAL +HKE+IGHR + + S
Sbjct: 125 VQFFSGLRIVPNGITLPVDYQGRSTGEAFVQFASKEIAEKALGKHKERIGHRYIEIFKS 183
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 100/252 (39%), Gaps = 54/252 (21%)
Query: 22 QFFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
QFF IVP I L D GRS+GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 126 QFFSGLRIVPNGITLPVDYQGRSTGEAFVQFASKEIAEKALGKHKERIGHRYIEIFKSSR 185
Query: 80 TSSKEANGRGTGGFGGVKSTPY-------------------------------------- 101
+ G GG + PY
Sbjct: 186 NEIRAYYDVPRRGLGGQRPGPYDRPMMSGPRGGYYGPGSARSGVLMDNIRTGGGYGGGYS 245
Query: 102 ------GVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV--DQCCMRLQGLPYE 153
G +C + R +R+ G + G + + + ++GLP+
Sbjct: 246 NFDNYNGFNNYCFGNGMYDERVRGERTGRGMGSHGYGGQVEGGSGYHNGHFVHMRGLPFR 305
Query: 154 CKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLV 213
+ DV KF L +P + I G+ TG A ++F E+A A+ + K + HR +
Sbjct: 306 ASEGDVAKFFSPL--IPLRVHIDVAPNGKSTGEADVEFRSHEDAVAAMSKDKNHMQHRYI 363
Query: 214 TLVM----SGAQ 221
L + SGAQ
Sbjct: 364 ELFLNSTASGAQ 375
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 43/66 (65%)
Query: 21 SQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
++FF P++P+ + + G+S+GEADVEF S +DA A+ + K++M RYIEL++
Sbjct: 312 AKFFSPLIPLRVHIDVAPNGKSTGEADVEFRSHEDAVAAMSKDKNHMQHRYIELFLNSTA 371
Query: 81 SSKEAN 86
S + +
Sbjct: 372 SGAQTS 377
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVP--NGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+R++GLP+ C +E+V F +I+ NG+ + GR +G A+++ E+ + AL
Sbjct: 10 VRIRGLPWSCTQEEVASFFSDCDIMGKINGVCFTYSKEGRPSGEAFLELKTAEDFKNALA 69
Query: 203 RHKEKIGHRLVTLVMS 218
+ ++ +GHR + + S
Sbjct: 70 KDRKYMGHRYIEVFKS 85
>gi|62510677|sp|Q60HC3.3|HNRPF_MACFA RecName: Full=Heterogeneous nuclear ribonucleoprotein F;
Short=hnRNP F; Contains: RecName: Full=Heterogeneous
nuclear ribonucleoprotein F, N-terminally processed
gi|52782291|dbj|BAD51992.1| heterogeneous nuclear ribonucleoprotein F [Macaca fascicularis]
Length = 415
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 102/192 (53%), Gaps = 46/192 (23%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S DD + AL++ + +MG RYIE++
Sbjct: 51 GRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVF------------------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ R+EMDW LK G + SA D +RL+GLP+ C KE++
Sbjct: 87 ------------------KSHRTEMDWVLKHSGPNSADSAND-GFVRLRGLPFGCTKEEI 127
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+F GLEIVPNGIT+P D G+ TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 128 VQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSS 187
Query: 220 AQ---WFLSPPL 228
+ + PPL
Sbjct: 188 QEEVRSYSDPPL 199
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++ T
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTG 366
Query: 82 SKEA 85
+
Sbjct: 367 ASNG 370
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D G+ +GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVF 184
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
++L+GLP+ C EDV+ FL I G+ + GR +G A+++ +++ + AL
Sbjct: 13 VKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMALK 72
Query: 203 RHKEKIGHRLVTLVMS 218
+ +E +GHR + + S
Sbjct: 73 KDRESMGHRYIEVFKS 88
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY+ + D+ F L V I I D GR TG A ++F E A A+ +
Sbjct: 290 CVHMRGLPYKATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEEAVAAMSK 347
Query: 204 HKEKIGHRLVTLVMS 218
+ + HR + L ++
Sbjct: 348 DRANMQHRYIELFLN 362
>gi|332244100|ref|XP_003271210.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 1
[Nomascus leucogenys]
gi|332244102|ref|XP_003271211.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 2
[Nomascus leucogenys]
gi|332244104|ref|XP_003271212.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 3
[Nomascus leucogenys]
Length = 415
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 102/192 (53%), Gaps = 46/192 (23%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S DD + AL++ + +MG RYIE++
Sbjct: 51 GRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVF------------------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ R+EMDW LK G + SA D +RL+GLP+ C KE++
Sbjct: 87 ------------------KSHRTEMDWVLKHSGPNSADSAND-GFVRLRGLPFGCTKEEI 127
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+F GLEIVPNGIT+P D G+ TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 128 VQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSS 187
Query: 220 AQW---FLSPPL 228
+ + PPL
Sbjct: 188 QEEVRSYSDPPL 199
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++ T
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTG 366
Query: 82 SKEA 85
+
Sbjct: 367 ASNG 370
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D G+ +GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVF 184
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
++L+GLP+ C EDV+ FL I G+ + GR +G A+++ +++ + AL
Sbjct: 13 VKLRGLPWSCSIEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMALK 72
Query: 203 RHKEKIGHRLVTLVMS 218
+ +E +GHR + + S
Sbjct: 73 KDRESMGHRYIEVFKS 88
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY+ + D+ F L V I I D GR TG A ++F E A A+ +
Sbjct: 290 CVHMRGLPYKATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEEAVAAMSK 347
Query: 204 HKEKIGHRLVTLVMS 218
+ + HR + L ++
Sbjct: 348 DRANMQHRYIELFLN 362
>gi|4826760|ref|NP_004957.1| heterogeneous nuclear ribonucleoprotein F [Homo sapiens]
gi|148470397|ref|NP_001091678.1| heterogeneous nuclear ribonucleoprotein F [Homo sapiens]
gi|148470400|ref|NP_001091677.1| heterogeneous nuclear ribonucleoprotein F [Homo sapiens]
gi|148470402|ref|NP_001091675.1| heterogeneous nuclear ribonucleoprotein F [Homo sapiens]
gi|148470404|ref|NP_001091674.1| heterogeneous nuclear ribonucleoprotein F [Homo sapiens]
gi|148470406|ref|NP_001091676.1| heterogeneous nuclear ribonucleoprotein F [Homo sapiens]
gi|350537293|ref|NP_001233466.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|386781898|ref|NP_001247944.1| heterogeneous nuclear ribonucleoprotein F [Macaca mulatta]
gi|297686319|ref|XP_002820702.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 1
[Pongo abelii]
gi|297686321|ref|XP_002820703.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 2
[Pongo abelii]
gi|297686325|ref|XP_002820705.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 4
[Pongo abelii]
gi|297686327|ref|XP_002820706.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 5
[Pongo abelii]
gi|297686329|ref|XP_002820707.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 6
[Pongo abelii]
gi|297686331|ref|XP_002820708.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 7
[Pongo abelii]
gi|297686333|ref|XP_002820709.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 8
[Pongo abelii]
gi|297686337|ref|XP_002820711.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 10
[Pongo abelii]
gi|297686339|ref|XP_002820712.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 11
[Pongo abelii]
gi|297686341|ref|XP_002820713.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 12
[Pongo abelii]
gi|297686343|ref|XP_002820714.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 13
[Pongo abelii]
gi|297686345|ref|XP_002820715.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 14
[Pongo abelii]
gi|395741477|ref|XP_003777588.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F [Pongo abelii]
gi|395741481|ref|XP_003777589.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F [Pongo abelii]
gi|397491662|ref|XP_003816768.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 1 [Pan
paniscus]
gi|397491664|ref|XP_003816769.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 2 [Pan
paniscus]
gi|397491666|ref|XP_003816770.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 3 [Pan
paniscus]
gi|397491668|ref|XP_003816771.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 4 [Pan
paniscus]
gi|397491670|ref|XP_003816772.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 5 [Pan
paniscus]
gi|397491672|ref|XP_003816773.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 6 [Pan
paniscus]
gi|397491674|ref|XP_003816774.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 7 [Pan
paniscus]
gi|397491676|ref|XP_003816775.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 8 [Pan
paniscus]
gi|397491678|ref|XP_003816776.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 9 [Pan
paniscus]
gi|397491680|ref|XP_003816777.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 10
[Pan paniscus]
gi|397491682|ref|XP_003816778.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 11
[Pan paniscus]
gi|397491684|ref|XP_003816779.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 12
[Pan paniscus]
gi|397491686|ref|XP_003816780.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 13
[Pan paniscus]
gi|426364503|ref|XP_004049345.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 1
[Gorilla gorilla gorilla]
gi|426364505|ref|XP_004049346.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 2
[Gorilla gorilla gorilla]
gi|426364507|ref|XP_004049347.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 3
[Gorilla gorilla gorilla]
gi|426364509|ref|XP_004049348.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 4
[Gorilla gorilla gorilla]
gi|1710628|sp|P52597.3|HNRPF_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein F;
Short=hnRNP F; AltName: Full=Nucleolin-like protein
mcs94-1; Contains: RecName: Full=Heterogeneous nuclear
ribonucleoprotein F, N-terminally processed
gi|452048|gb|AAC37584.1| HnRNP F protein [Homo sapiens]
gi|12655155|gb|AAH01432.1| Heterogeneous nuclear ribonucleoprotein F [Homo sapiens]
gi|13279032|gb|AAH04254.1| Heterogeneous nuclear ribonucleoprotein F [Homo sapiens]
gi|15990432|gb|AAH15580.1| HNRPF protein [Homo sapiens]
gi|67967777|dbj|BAE00371.1| unnamed protein product [Macaca fascicularis]
gi|76780063|gb|AAI06009.1| HNRPF protein [Homo sapiens]
gi|119607001|gb|EAW86595.1| heterogeneous nuclear ribonucleoprotein F, isoform CRA_a [Homo
sapiens]
gi|119607002|gb|EAW86596.1| heterogeneous nuclear ribonucleoprotein F, isoform CRA_a [Homo
sapiens]
gi|119607003|gb|EAW86597.1| heterogeneous nuclear ribonucleoprotein F, isoform CRA_a [Homo
sapiens]
gi|119607004|gb|EAW86598.1| heterogeneous nuclear ribonucleoprotein F, isoform CRA_a [Homo
sapiens]
gi|119607005|gb|EAW86599.1| heterogeneous nuclear ribonucleoprotein F, isoform CRA_a [Homo
sapiens]
gi|123997411|gb|ABM86307.1| heterogeneous nuclear ribonucleoprotein F [synthetic construct]
gi|157929032|gb|ABW03801.1| heterogeneous nuclear ribonucleoprotein F [synthetic construct]
gi|168277548|dbj|BAG10752.1| heterogeneous nuclear ribonucleoprotein F [synthetic construct]
gi|193785530|dbj|BAG50896.1| unnamed protein product [Homo sapiens]
gi|343959614|dbj|BAK63664.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|355562388|gb|EHH18982.1| Heterogeneous nuclear ribonucleoprotein F [Macaca mulatta]
gi|355782737|gb|EHH64658.1| Heterogeneous nuclear ribonucleoprotein F [Macaca fascicularis]
gi|380785399|gb|AFE64575.1| heterogeneous nuclear ribonucleoprotein F [Macaca mulatta]
gi|384946770|gb|AFI36990.1| heterogeneous nuclear ribonucleoprotein F [Macaca mulatta]
gi|410262002|gb|JAA18967.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410262004|gb|JAA18968.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410262006|gb|JAA18969.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410262008|gb|JAA18970.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410299574|gb|JAA28387.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410299576|gb|JAA28388.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410299578|gb|JAA28389.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410299580|gb|JAA28390.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410299582|gb|JAA28391.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410340859|gb|JAA39376.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410340861|gb|JAA39377.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410340863|gb|JAA39378.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410340865|gb|JAA39379.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410340867|gb|JAA39380.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
gi|410340869|gb|JAA39381.1| heterogeneous nuclear ribonucleoprotein F [Pan troglodytes]
Length = 415
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 102/192 (53%), Gaps = 46/192 (23%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S DD + AL++ + +MG RYIE++
Sbjct: 51 GRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVF------------------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ R+EMDW LK G + SA D +RL+GLP+ C KE++
Sbjct: 87 ------------------KSHRTEMDWVLKHSGPNSADSAND-GFVRLRGLPFGCTKEEI 127
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+F GLEIVPNGIT+P D G+ TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 128 VQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSS 187
Query: 220 AQW---FLSPPL 228
+ + PPL
Sbjct: 188 QEEVRSYSDPPL 199
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++ T
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTG 366
Query: 82 SKEA 85
+
Sbjct: 367 ASNG 370
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D G+ +GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVF 184
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
++L+GLP+ C EDV+ FL I G+ + GR +G A+++ +++ + AL
Sbjct: 13 VKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMALK 72
Query: 203 RHKEKIGHRLVTLVMS 218
+ +E +GHR + + S
Sbjct: 73 KDRESMGHRYIEVFKS 88
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY+ + D+ F L V I I D GR TG A ++F E A A+ +
Sbjct: 290 CVHMRGLPYKATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEEAVAAMSK 347
Query: 204 HKEKIGHRLVTLVMS 218
+ + HR + L ++
Sbjct: 348 DRANMQHRYIELFLN 362
>gi|58476100|gb|AAH89313.1| Hnrpf protein [Mus musculus]
Length = 395
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 102/192 (53%), Gaps = 46/192 (23%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S DD + AL++ + +MG RYIE++
Sbjct: 31 GRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVF------------------------ 66
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ R+EMDW LK G + SA D +RL+GLP+ C KE++
Sbjct: 67 ------------------KSHRTEMDWVLKHSGPNSADSAND-GFVRLRGLPFGCTKEEI 107
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+F GLEIVPNGIT+P D G+ TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 108 VQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSS 167
Query: 220 AQW---FLSPPL 228
+ + PPL
Sbjct: 168 QEEVRSYSDPPL 179
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 106/245 (43%), Gaps = 59/245 (24%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY---M 76
QFF IVP I L D G+ +GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 109 QFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQ 168
Query: 77 EE-----------------------GTSS------KEA------NGRGTGGFGGVK---- 97
EE GT+ K+A +G + G+GG +
Sbjct: 169 EEVRSYSDPPLKFMSVQRPGPYDRPGTARRYIGIVKQAGLDRMRSGAYSAGYGGYEEYSG 228
Query: 98 -STPYGVGIFCISQFLA---KWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYE 153
S YG + L+ M + + ++ ++ S C + ++GLPY+
Sbjct: 229 LSDGYGFTTDLFGRDLSYCLSGMYDHRYGDSEFTVQ--------STTGHC-VHMRGLPYK 279
Query: 154 CKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLV 213
+ D+ F L V I I D GR TG A ++F E A A+ + + + HR +
Sbjct: 280 ATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 337
Query: 214 TLVMS 218
L ++
Sbjct: 338 ELFLN 342
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++ T
Sbjct: 287 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTG 346
Query: 82 SKEA 85
+
Sbjct: 347 ASNG 350
>gi|19527048|ref|NP_598595.1| heterogeneous nuclear ribonucleoprotein F [Mus musculus]
gi|25742579|ref|NP_071792.1| heterogeneous nuclear ribonucleoprotein F [Rattus norvegicus]
gi|82546815|ref|NP_001032362.1| heterogeneous nuclear ribonucleoprotein F [Rattus norvegicus]
gi|82546817|ref|NP_001032363.1| heterogeneous nuclear ribonucleoprotein F [Rattus norvegicus]
gi|82546819|ref|NP_001032364.1| heterogeneous nuclear ribonucleoprotein F [Rattus norvegicus]
gi|261878597|ref|NP_001159899.1| heterogeneous nuclear ribonucleoprotein F [Mus musculus]
gi|261878599|ref|NP_001159900.1| heterogeneous nuclear ribonucleoprotein F [Mus musculus]
gi|261878601|ref|NP_001159901.1| heterogeneous nuclear ribonucleoprotein F [Mus musculus]
gi|261878603|ref|NP_001159902.1| heterogeneous nuclear ribonucleoprotein F [Mus musculus]
gi|261878605|ref|NP_001159903.1| heterogeneous nuclear ribonucleoprotein F [Mus musculus]
gi|261878607|ref|NP_001159904.1| heterogeneous nuclear ribonucleoprotein F [Mus musculus]
gi|81911895|sp|Q794E4.3|HNRPF_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein F;
Short=hnRNP F; Contains: RecName: Full=Heterogeneous
nuclear ribonucleoprotein F, N-terminally processed
gi|81918016|sp|Q9Z2X1.3|HNRPF_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein F;
Short=hnRNP F; Contains: RecName: Full=Heterogeneous
nuclear ribonucleoprotein F, N-terminally processed
gi|4153896|dbj|BAA37095.1| ribonucleoprotein F [Rattus norvegicus]
gi|17390408|gb|AAH18185.1| Heterogeneous nuclear ribonucleoprotein F [Mus musculus]
gi|19343662|gb|AAH25481.1| Heterogeneous nuclear ribonucleoprotein F [Mus musculus]
gi|22137695|gb|AAH29163.1| Heterogeneous nuclear ribonucleoprotein F [Mus musculus]
gi|23274049|gb|AAH33483.1| Heterogeneous nuclear ribonucleoprotein F [Mus musculus]
gi|66911957|gb|AAH97275.1| Heterogeneous nuclear ribonucleoprotein F [Rattus norvegicus]
gi|73909045|gb|AAI03635.1| Heterogeneous nuclear ribonucleoprotein F [Rattus norvegicus]
gi|148667168|gb|EDK99584.1| mCG133010, isoform CRA_a [Mus musculus]
gi|149049635|gb|EDM02089.1| heterogeneous nuclear ribonucleoprotein F, isoform CRA_a [Rattus
norvegicus]
gi|149049636|gb|EDM02090.1| heterogeneous nuclear ribonucleoprotein F, isoform CRA_a [Rattus
norvegicus]
gi|149049637|gb|EDM02091.1| heterogeneous nuclear ribonucleoprotein F, isoform CRA_a [Rattus
norvegicus]
gi|149049638|gb|EDM02092.1| heterogeneous nuclear ribonucleoprotein F, isoform CRA_a [Rattus
norvegicus]
gi|149049639|gb|EDM02093.1| heterogeneous nuclear ribonucleoprotein F, isoform CRA_a [Rattus
norvegicus]
gi|149049640|gb|EDM02094.1| heterogeneous nuclear ribonucleoprotein F, isoform CRA_a [Rattus
norvegicus]
Length = 415
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 102/192 (53%), Gaps = 46/192 (23%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S DD + AL++ + +MG RYIE++
Sbjct: 51 GRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVF------------------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ R+EMDW LK G + SA D +RL+GLP+ C KE++
Sbjct: 87 ------------------KSHRTEMDWVLKHSGPNSADSAND-GFVRLRGLPFGCTKEEI 127
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+F GLEIVPNGIT+P D G+ TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 128 VQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSS 187
Query: 220 AQW---FLSPPL 228
+ + PPL
Sbjct: 188 QEEVRSYSDPPL 199
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 106/245 (43%), Gaps = 59/245 (24%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY---M 76
QFF IVP I L D G+ +GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQ 188
Query: 77 EE-----------------------GTSS------KEA------NGRGTGGFGGVK---- 97
EE GT+ K+A +G + G+GG +
Sbjct: 189 EEVRSYSDPPLKFMSVQRPGPYDRPGTARRYIGIVKQAGLDRMRSGAYSAGYGGYEEYSG 248
Query: 98 -STPYGVGIFCISQFLA---KWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYE 153
S YG + L+ M + + ++ ++ S C + ++GLPY+
Sbjct: 249 LSDGYGFTTDLFGRDLSYCLSGMYDHRYGDSEFTVQ--------STTGHC-VHMRGLPYK 299
Query: 154 CKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLV 213
+ D+ F L V I I D GR TG A ++F E A A+ + + + HR +
Sbjct: 300 ATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 357
Query: 214 TLVMS 218
L ++
Sbjct: 358 ELFLN 362
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++ T
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTG 366
Query: 82 SKEA 85
+
Sbjct: 367 ASNG 370
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
++L+GLP+ C EDV+ FL I G+ + GR +G A+++ +++ + AL
Sbjct: 13 VKLRGLPWSCSIEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLALK 72
Query: 203 RHKEKIGHRLVTLVMS 218
+ +E +GHR + + S
Sbjct: 73 KDRESMGHRYIEVFKS 88
>gi|260834915|ref|XP_002612455.1| hypothetical protein BRAFLDRAFT_136434 [Branchiostoma floridae]
gi|229297832|gb|EEN68464.1| hypothetical protein BRAFLDRAFT_136434 [Branchiostoma floridae]
Length = 411
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 96/179 (53%), Gaps = 46/179 (25%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE + +D ++AL +H +MG RYIE++
Sbjct: 44 GRPSGEAFVEVETSEDFEKALAKHNQHMGHRYIEVF------------------------ 79
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
R+K SEM+W +K G V+ +RL+GLP+ C KE++
Sbjct: 80 ------------------RSKVSEMEWVVKHSGQ----DQVNDGIVRLRGLPFGCSKEEI 117
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+F GLEIVPNGIT+P DY GR TG A++QF ++ AEKAL +HKEKIGHR + + S
Sbjct: 118 AQFFSGLEIVPNGITLPTDYQGRSTGEAFVQFTSQDIAEKALGKHKEKIGHRYIEIFKS 176
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
+QFF IVP I L TD GRS+GEA V+F+S D A++AL +HK +G RYIE++
Sbjct: 118 AQFFSGLEIVPNGITLPTDYQGRSTGEAFVQFTSQDIAEKALGKHKEKIGHRYIEIF 174
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 33/46 (71%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNM 67
QFF+P+VP+ + + R++GEADVEF+S DDA A+ + K+NM
Sbjct: 296 QFFQPLVPMKVQIHYGPDKRATGEADVEFASHDDAVAAMAKDKANM 341
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 145 MRLQGLPYECKKEDVEKFL--EGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+R++GLP+ E+V+ FL EG ++ GI GR +G A+++ E+ EKA
Sbjct: 4 VRMRGLPWSATCEEVKNFLTSEGCKVKGGDGGIHFTFSKEGRPSGEAFVEVETSEDFEKA 63
Query: 201 LLRHKEKIGHRLVTLVMS 218
L +H + +GHR + + S
Sbjct: 64 LAKHNQHMGHRYIEVFRS 81
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+ ++GLP++ ED+E+F + L VP + I + R TG A ++F ++A A+ +
Sbjct: 280 VHMRGLPFKAASEDIEQFFQPL--VPMKVQIHYGPDKRATGEADVEFASHDDAVAAMAKD 337
Query: 205 KEKI 208
K +
Sbjct: 338 KANM 341
>gi|402880032|ref|XP_003903619.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 1
[Papio anubis]
gi|402880034|ref|XP_003903620.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 2
[Papio anubis]
gi|402880036|ref|XP_003903621.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 3
[Papio anubis]
gi|402880038|ref|XP_003903622.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 4
[Papio anubis]
gi|402880040|ref|XP_003903623.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 5
[Papio anubis]
gi|402880042|ref|XP_003903624.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 6
[Papio anubis]
gi|402880044|ref|XP_003903625.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 7
[Papio anubis]
gi|402880046|ref|XP_003903626.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 8
[Papio anubis]
gi|402880048|ref|XP_003903627.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 9
[Papio anubis]
gi|402880050|ref|XP_003903628.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 10
[Papio anubis]
gi|402880052|ref|XP_003903629.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 11
[Papio anubis]
gi|402880054|ref|XP_003903630.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 12
[Papio anubis]
gi|402880056|ref|XP_003903631.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 13
[Papio anubis]
gi|402880058|ref|XP_003903632.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 14
[Papio anubis]
Length = 415
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 102/192 (53%), Gaps = 46/192 (23%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S DD + AL++ + +MG RYIE++
Sbjct: 51 GRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVF------------------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ R+EMDW LK G + SA D +RL+GLP+ C KE++
Sbjct: 87 ------------------KSHRTEMDWVLKHSGPNSADSAND-GFVRLRGLPFGCTKEEI 127
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+F GLEIVPNGIT+P D G+ TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 128 IQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSS 187
Query: 220 AQW---FLSPPL 228
+ + PPL
Sbjct: 188 QEEVRSYSDPPL 199
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++ T
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTG 366
Query: 82 SKEA 85
+
Sbjct: 367 ASNG 370
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D G+ +GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVF 184
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
++L+GLP+ C EDV+ FL I G+ + GR +G A+++ +++ + AL
Sbjct: 13 VKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMALK 72
Query: 203 RHKEKIGHRLVTLVMS 218
+ +E +GHR + + S
Sbjct: 73 KDRESMGHRYIEVFKS 88
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY+ + D+ F L V I I D GR TG A ++F E A A+ +
Sbjct: 290 CVHMRGLPYKATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEEAVAAMSK 347
Query: 204 HKEKIGHRLVTLVMS 218
+ + HR + L ++
Sbjct: 348 DRANMQHRYIELFLN 362
>gi|296220055|ref|XP_002756146.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 1
[Callithrix jacchus]
gi|403276785|ref|XP_003930066.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 1
[Saimiri boliviensis boliviensis]
gi|403276787|ref|XP_003930067.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 2
[Saimiri boliviensis boliviensis]
Length = 415
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 102/192 (53%), Gaps = 46/192 (23%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S DD + AL++ + +MG RYIE++
Sbjct: 51 GRQSGEAFVELGSEDDVKLALKKDRESMGHRYIEVF------------------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ R+EMDW LK G + SA D +RL+GLP+ C KE++
Sbjct: 87 ------------------KSHRTEMDWVLKHSGPNSADSAND-GFVRLRGLPFGCTKEEI 127
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+F GLEIVPNGIT+P D G+ TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 128 VQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSS 187
Query: 220 AQW---FLSPPL 228
+ + PPL
Sbjct: 188 QEEVRSYSDPPL 199
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++ T
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTG 366
Query: 82 SKEA 85
+
Sbjct: 367 ASNG 370
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D G+ +GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVF 184
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
++L+GLP+ C EDV+ FL I G+ + GR +G A+++ +++ + AL
Sbjct: 13 VKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKLALK 72
Query: 203 RHKEKIGHRLVTLVMS 218
+ +E +GHR + + S
Sbjct: 73 KDRESMGHRYIEVFKS 88
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY+ + D+ F L V I I D GR TG A ++F E A A+ +
Sbjct: 290 CVHMRGLPYKATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEEAVAAMSK 347
Query: 204 HKEKIGHRLVTLVMS 218
+ + HR + L ++
Sbjct: 348 DRANMQHRYIELFLN 362
>gi|351699543|gb|EHB02462.1| Heterogeneous nuclear ribonucleoprotein F [Heterocephalus glaber]
Length = 372
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 102/192 (53%), Gaps = 46/192 (23%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S DD + AL++ + +MG RYIE++
Sbjct: 50 GRQSGEAFVELESEDDVKMALKKDRESMGHRYIEVF------------------------ 85
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ R+EMDW LK G + +A D +RL+GLP+ C KE++
Sbjct: 86 ------------------KSHRTEMDWVLKHSGPNSADTAND-GFVRLRGLPFGCTKEEI 126
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+F GLEIVPNGIT+P D G+ TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 127 VQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSS 186
Query: 220 AQW---FLSPPL 228
+ + PPL
Sbjct: 187 QEEVRSYSDPPL 198
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY---M 76
QFF IVP I L D G+ +GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 128 QFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQ 187
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
EE S + + F V+ G + +++ K++ ++ +
Sbjct: 188 EEVRSYSDPPLK----FTSVQQP----GPYDHPDTARRYIGIVKQAGLERMRSYGDGEFT 239
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
+ C+ ++GLPY+ + D+ F L V I I D GR TG A ++F E
Sbjct: 240 VQSTTGHCVHMRGLPYKATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEE 297
Query: 197 AEKALLRHKEKIGHRLVTLVMS 218
A A+ + + + HR + L ++
Sbjct: 298 AVAAMSKDRANMQHRYIELFLN 319
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++ T
Sbjct: 264 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTG 323
Query: 82 SKEANG 87
+ +NG
Sbjct: 324 A--SNG 327
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
++L+GLP+ C EDV+ FL I G+ + GR +G A+++ +++ + AL
Sbjct: 11 VVKLRGLPWSCSIEDVQNFLSDCTIRDGVAGVHFIYTREGRQSGEAFVELESEDDVKMAL 70
Query: 202 LRHKEKIGHRLVTLVMS 218
+ +E +GHR + + S
Sbjct: 71 KKDRESMGHRYIEVFKS 87
>gi|351714958|gb|EHB17877.1| Heterogeneous nuclear ribonucleoprotein F [Heterocephalus glaber]
Length = 414
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 102/192 (53%), Gaps = 46/192 (23%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S DD + AL++ + +MG RYIE++
Sbjct: 50 GRQSGEAFVELESEDDVKMALKKDRESMGHRYIEVF------------------------ 85
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ R+EMDW LK G + +A D +RL+GLP+ C KE++
Sbjct: 86 ------------------KSHRTEMDWVLKHSGPNSADTAND-GFVRLRGLPFGCTKEEI 126
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+F GLEIVPNGIT+P D G+ TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 127 VQFFSGLEIVPNGITLPVDPKGKITGEAFVQFASQELAEKALWKHKERIGHRYIEVFKSS 186
Query: 220 AQW---FLSPPL 228
+ + PPL
Sbjct: 187 QEEVRSYSDPPL 198
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ P+ + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++ T
Sbjct: 306 NFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTG 365
Query: 82 S 82
+
Sbjct: 366 A 366
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D G+ +GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 128 QFFSGLEIVPNGITLPVDPKGKITGEAFVQFASQELAEKALWKHKERIGHRYIEVF 183
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
++L+GLP+ C EDV+ FL I G+ + GR +G A+++ +++ + AL
Sbjct: 12 VKLRGLPWSCSIEDVQNFLSDCTIRDGVAGVHFIYTREGRQSGEAFVELESEDDVKMALK 71
Query: 203 RHKEKIGHRLVTLVMS 218
+ +E +GHR + + S
Sbjct: 72 KDRESMGHRYIEVFKS 87
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY+ + D+ F L + I I D GR TG A ++F E A A+ +
Sbjct: 289 CVHMRGLPYKATENDIYNFFSPLNPMRVHIEIGPD--GRVTGEADVEFATHEEAVAAMSK 346
Query: 204 HKEKIGHRLVTLVMS 218
+ + HR + L ++
Sbjct: 347 DRANMQHRYIELFLN 361
>gi|26345420|dbj|BAC36361.1| unnamed protein product [Mus musculus]
Length = 421
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 102/192 (53%), Gaps = 46/192 (23%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S DD + AL++ + +MG RYIE++
Sbjct: 51 GRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVF------------------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ R+EMDW LK G + SA D +RL+GLP+ C KE++
Sbjct: 87 ------------------KSHRTEMDWVLKHSGPNSADSAND-GFVRLRGLPFGCTKEEI 127
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+F GLEIVPNGIT+P D G+ TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 128 VQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSS 187
Query: 220 AQ---WFLSPPL 228
+ + PPL
Sbjct: 188 QEEVRSYSDPPL 199
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 106/245 (43%), Gaps = 59/245 (24%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY---M 76
QFF IVP I L D G+ +GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQ 188
Query: 77 EE-----------------------GTSS------KEA------NGRGTGGFGGVK---- 97
EE GT+ K+A +G + G+GG +
Sbjct: 189 EEVRSYSDPPLKFMSVQRPGPYDRPGTARRYIGIVKQAGLDRMRSGAYSAGYGGYEEYSG 248
Query: 98 -STPYGVGIFCISQFLA---KWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYE 153
S YG + L+ M + + ++ ++ S C + ++GLPY+
Sbjct: 249 LSDGYGFTTDLFGRDLSYCLSGMYDHRYGDSEFTVQ--------STTGHC-VHMRGLPYK 299
Query: 154 CKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLV 213
+ D+ F L V I I D GR TG A ++F E A A+ + + + HR +
Sbjct: 300 ATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 357
Query: 214 TLVMS 218
L ++
Sbjct: 358 ELFLN 362
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++ T
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTG 366
Query: 82 SKEA 85
+
Sbjct: 367 ASNG 370
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
++L+GLP+ C EDV+ FL I G+ + GR +G A+++ +++ + AL
Sbjct: 13 VKLRGLPWSCSIEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLALK 72
Query: 203 RHKEKIGHRLVTLVMS 218
+ +E +GHR + + S
Sbjct: 73 KDRESMGHRYIEVFKS 88
>gi|431914602|gb|ELK15790.1| Heterogeneous nuclear ribonucleoprotein F [Pteropus alecto]
Length = 414
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 104/202 (51%), Gaps = 46/202 (22%)
Query: 30 VNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRG 89
I + GR SGEA VE S DD + AL++ + +MG RYIE++
Sbjct: 41 TGIHFIYTREGRQSGEAFVELESEDDVKMALKKDRESMGHRYIEVF-------------- 86
Query: 90 TGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQG 149
++ R+EMDW LK G + +A D +RL+G
Sbjct: 87 ----------------------------KSHRTEMDWVLKHSGPNSADTAND-GFVRLRG 117
Query: 150 LPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIG 209
LP+ C KE++ +F GLEIVPNGIT+P D G+ TG A++QF +E AEKAL +HKE+IG
Sbjct: 118 LPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIG 177
Query: 210 HRLVTLVMSGAQW---FLSPPL 228
HR + + S + + PPL
Sbjct: 178 HRYIEVFKSSQEEVRSYSDPPL 199
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 103/242 (42%), Gaps = 53/242 (21%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY---M 76
QFF IVP I L D G+ +GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQ 188
Query: 77 EE-----------------------GTSS------KEA------NGRGTGGFGGVK---- 97
EE GT+ K+A +G + G+GG +
Sbjct: 189 EEVRSYSDPPLKFMSVQRPGPYDRPGTARRYIGIVKQAGLERMRSGAYSAGYGGYEEYSG 248
Query: 98 -STPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKK 156
S YG + L+ + S M G S C + ++GLPY+ +
Sbjct: 249 LSDGYGFTTDLFGRDLSYCL-----SGMYDHRYGDGEFTVQSTTGHC-VHMRGLPYKATE 302
Query: 157 EDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLV 216
D+ F L V I I D GR TG A ++F E A A+ + + + HR + L
Sbjct: 303 NDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELF 360
Query: 217 MS 218
++
Sbjct: 361 LN 362
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++ T
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTG 366
Query: 82 SKEA 85
+
Sbjct: 367 ASNG 370
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPH---DYAGRCTGVAYIQFVDKENAEKAL 201
++L+GLP+ C EDV+ FL G I+ +G T H GR +G A+++ +++ + AL
Sbjct: 13 VKLRGLPWSCSVEDVQNFLSGC-IIHDGATGIHFIYTREGRQSGEAFVELESEDDVKMAL 71
Query: 202 LRHKEKIGHRLVTLVMS 218
+ +E +GHR + + S
Sbjct: 72 KKDRESMGHRYIEVFKS 88
>gi|194042674|ref|XP_001929089.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 5 [Sus
scrofa]
gi|335301642|ref|XP_003359253.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F [Sus scrofa]
gi|350592730|ref|XP_003483523.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F [Sus scrofa]
Length = 414
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 102/192 (53%), Gaps = 46/192 (23%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S DD + AL++ + +MG RYIE++
Sbjct: 51 GRQSGEAFVELESEDDVKMALKKDRESMGHRYIEVF------------------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ R+EMDW LK G + +A D +RL+GLP+ C KE++
Sbjct: 87 ------------------KSHRTEMDWVLKHSGPNSADTAND-GFVRLRGLPFGCTKEEI 127
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+F GLEIVPNGIT+P D G+ TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 128 VQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSS 187
Query: 220 AQW---FLSPPL 228
+ + PPL
Sbjct: 188 QEEVRSYSDPPL 199
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 103/242 (42%), Gaps = 53/242 (21%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY---M 76
QFF IVP I L D G+ +GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQ 188
Query: 77 EE-----------------------GTSS------KEA------NGRGTGGFGGVK---- 97
EE GT+ K+A +G + G+GG +
Sbjct: 189 EEVRSYSDPPLKFMSVQRPGPYDRPGTARRYIGIVKQAGLERMRSGAYSAGYGGYEEYSG 248
Query: 98 -STPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKK 156
S YG + L+ + S M G S C + ++GLPY+ +
Sbjct: 249 LSDGYGFTTDLFGRDLSYCL-----SGMYDHRYGDGEFTVQSTTGHC-VHMRGLPYKATE 302
Query: 157 EDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLV 216
D+ F L V I I D GR TG A ++F + A A+ + + + HR + L
Sbjct: 303 NDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHDEAVAAMSKDRANMQHRYIELF 360
Query: 217 MS 218
++
Sbjct: 361 LN 362
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + GR +GEADVEF++ D+A A+ + ++NM RYIEL++ T
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHDEAVAAMSKDRANMQHRYIELFLNSTTG 366
Query: 82 SKEA 85
+
Sbjct: 367 ASNG 370
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
++L+GLP+ C EDV+ FL I G+ + GR +G A+++ +++ + AL
Sbjct: 13 VKLRGLPWSCSVEDVQNFLSDCTIRDGAAGVHFIYTREGRQSGEAFVELESEDDVKMALK 72
Query: 203 RHKEKIGHRLVTLVMS 218
+ +E +GHR + + S
Sbjct: 73 KDRESMGHRYIEVFKS 88
>gi|417400513|gb|JAA47194.1| Putative splicing factor hnrnp-f [Desmodus rotundus]
Length = 414
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 102/192 (53%), Gaps = 46/192 (23%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S DD + AL++ + +MG RYIE++
Sbjct: 51 GRQSGEAFVELESEDDVKMALKKDRESMGHRYIEVF------------------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ R+EMDW LK G + +A D +RL+GLP+ C KE++
Sbjct: 87 ------------------KSHRTEMDWVLKHSGPNSADTAND-GFVRLRGLPFGCTKEEI 127
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+F GLEIVPNGIT+P D G+ TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 128 VQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSS 187
Query: 220 AQW---FLSPPL 228
+ + PPL
Sbjct: 188 QEEVRSYSDPPL 199
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 98/241 (40%), Gaps = 51/241 (21%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY---M 76
QFF IVP I L D G+ +GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQ 188
Query: 77 EE-----------------------GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQ--- 110
EE GT+ + G ++S Y G +
Sbjct: 189 EEVRSYSDPPLKFMSVQRPGPYDRPGTARRYIGIVKQAGLERMRSGAYSTGYGSYEEYSG 248
Query: 111 ------FLAKWMRRAKRSEMDWALK-------RQGAVLSGSAVDQCCMRLQGLPYECKKE 157
F A R ++ + L G S C + ++GLPY+ +
Sbjct: 249 LSDGYGFTADLFGR----DLSYCLSGMYDHRYGDGEFTVQSTTGHC-VHMRGLPYKATEN 303
Query: 158 DVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVM 217
D+ F L V I I D GR TG A ++F E A A+ + + + HR + L +
Sbjct: 304 DIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFL 361
Query: 218 S 218
+
Sbjct: 362 N 362
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++ T
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTG 366
Query: 82 SKEA 85
+
Sbjct: 367 ASNG 370
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPH---DYAGRCTGVAYIQFVDKENAEKA 200
++L+GLP+ C EDV+ FL G I+ +G+ H GR +G A+++ +++ + A
Sbjct: 12 VVKLRGLPWSCSVEDVQNFLSGC-IIHDGVAGIHFIYTREGRQSGEAFVELESEDDVKMA 70
Query: 201 LLRHKEKIGHRLVTLVMS 218
L + +E +GHR + + S
Sbjct: 71 LKKDRESMGHRYIEVFKS 88
>gi|73997922|ref|XP_848697.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 3
[Canis lupus familiaris]
gi|73997926|ref|XP_856894.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 5
[Canis lupus familiaris]
gi|73997930|ref|XP_856973.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 7
[Canis lupus familiaris]
gi|301763831|ref|XP_002917330.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like isoform 1
[Ailuropoda melanoleuca]
gi|301763833|ref|XP_002917331.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like isoform 2
[Ailuropoda melanoleuca]
gi|301763835|ref|XP_002917332.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like isoform 3
[Ailuropoda melanoleuca]
gi|301763837|ref|XP_002917333.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like isoform 4
[Ailuropoda melanoleuca]
gi|410975641|ref|XP_003994239.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 1
[Felis catus]
gi|410975643|ref|XP_003994240.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 2
[Felis catus]
gi|410975645|ref|XP_003994241.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 3
[Felis catus]
gi|281338546|gb|EFB14130.1| hypothetical protein PANDA_005550 [Ailuropoda melanoleuca]
Length = 414
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 102/192 (53%), Gaps = 46/192 (23%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S DD + AL++ + +MG RYIE++
Sbjct: 51 GRQSGEAFVELESEDDVKMALKKDRESMGHRYIEVF------------------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ R+EMDW LK G + +A D +RL+GLP+ C KE++
Sbjct: 87 ------------------KSHRTEMDWVLKHSGPNSADTAND-GFVRLRGLPFGCTKEEI 127
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+F GLEIVPNGIT+P D G+ TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 128 VQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSS 187
Query: 220 AQW---FLSPPL 228
+ + PPL
Sbjct: 188 QEEVRSYSDPPL 199
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 103/242 (42%), Gaps = 53/242 (21%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY---M 76
QFF IVP I L D G+ +GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQ 188
Query: 77 EE-----------------------GTSS------KEA------NGRGTGGFGGVK---- 97
EE GT+ K+A +G + G+GG +
Sbjct: 189 EEVRSYSDPPLKFMSVQRPGPYDRPGTARRYIGIVKQAGLERMRSGAYSAGYGGYEEYSG 248
Query: 98 -STPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKK 156
S YG + L+ + S M G S C + ++GLPY+ +
Sbjct: 249 LSDGYGFTTDLFGRDLSYCL-----SGMYDHRYGDGEFTVQSTTGHC-VHMRGLPYKATE 302
Query: 157 EDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLV 216
D+ F L V I I D GR TG A ++F E A A+ + + + HR + L
Sbjct: 303 NDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELF 360
Query: 217 MS 218
++
Sbjct: 361 LN 362
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++ T
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTG 366
Query: 82 SKEA 85
+
Sbjct: 367 ASNG 370
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
++L+GLP+ C EDV+ FL I G+ + GR +G A+++ +++ + AL
Sbjct: 13 VKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELESEDDVKMALK 72
Query: 203 RHKEKIGHRLVTLVMS 218
+ +E +GHR + + S
Sbjct: 73 KDRESMGHRYIEVFKS 88
>gi|348560746|ref|XP_003466174.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Cavia
porcellus]
Length = 414
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 102/192 (53%), Gaps = 46/192 (23%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S DD + AL++ + +MG RYIE++
Sbjct: 50 GRQSGEAFVELESEDDVKMALKKDRESMGHRYIEVF------------------------ 85
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ R+EMDW LK G + +A D +RL+GLP+ C KE++
Sbjct: 86 ------------------KSHRTEMDWVLKHSGPNSADTAND-GFVRLRGLPFGCTKEEI 126
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+F GLEIVPNGIT+P D G+ TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 127 VQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSS 186
Query: 220 AQW---FLSPPL 228
+ + PPL
Sbjct: 187 QEEVRSYSDPPL 198
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 103/242 (42%), Gaps = 53/242 (21%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY---M 76
QFF IVP I L D G+ +GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 128 QFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQ 187
Query: 77 EE-----------------------GTSS------KEA------NGRGTGGFGGVK---- 97
EE GT+ K+A +G + G+GG +
Sbjct: 188 EEVRSYSDPPLKFMSVQRPGPYDRPGTARRYIGIVKQAGLERMRSGAYSAGYGGYEEYSG 247
Query: 98 -STPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKK 156
S YG + L+ + S M G S C + ++GLPY+ +
Sbjct: 248 LSDGYGFTTDLFGRDLSYCL-----SGMYDHRYGDGEFTVQSTTGHC-VHMRGLPYKATE 301
Query: 157 EDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLV 216
D+ F L V I I D GR TG A ++F E A A+ + + + HR + L
Sbjct: 302 NDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELF 359
Query: 217 MS 218
++
Sbjct: 360 LN 361
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++ T
Sbjct: 306 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTG 365
Query: 82 SKEA 85
+
Sbjct: 366 ASNG 369
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
++L+GLP+ C EDV+ FL I G+ + GR +G A+++ +++ + AL
Sbjct: 12 VKLRGLPWSCSIEDVQNFLSDCTIRDGVAGVHFIYTREGRQSGEAFVELESEDDVKMALK 71
Query: 203 RHKEKIGHRLVTLVMS 218
+ +E +GHR + + S
Sbjct: 72 KDRESMGHRYIEVFKS 87
>gi|351714959|gb|EHB17878.1| Heterogeneous nuclear ribonucleoprotein F [Heterocephalus glaber]
Length = 413
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 98/182 (53%), Gaps = 43/182 (23%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S DD + AL++ + +MG RYIE++
Sbjct: 50 GRQSGEAFVELESEDDVKMALKKDRESMGHRYIEVF------------------------ 85
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ R+EMDW LK G + +A D +RL+GLP+ C KE++
Sbjct: 86 ------------------KSHRTEMDWVLKHSGPNSADTAND-GFVRLRGLPFGCTKEEI 126
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+F GLEIVPNGIT+P D G+ TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 127 VQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALRKHKERIGHRYIEVFKSS 186
Query: 220 AQ 221
Q
Sbjct: 187 QQ 188
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 98/237 (41%), Gaps = 44/237 (18%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIEL----- 74
QFF IVP I L D G+ +GEA V+F+S + A++AL++HK +G RYIE+
Sbjct: 128 QFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALRKHKERIGHRYIEVFKSSQ 187
Query: 75 ---------------------YMEEGTS------------SKEANGRGTGGFGGVKSTPY 101
Y GT+ + ++G + G+GG + +
Sbjct: 188 QEVRSYSDLPLKFMSMQRPGPYDRPGTARRYIGIVKQTGLERMSSGAYSAGYGGFEYSGL 247
Query: 102 GVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEK 161
G + + + D + + C+ ++GLPY+ + D+
Sbjct: 248 SEGYGFTTDLFGRDLSYCLSGMYDHGFGD--GEFTVQSTTGHCVHMRGLPYKATENDIYN 305
Query: 162 FLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
F L + I I D GR TG A ++F E A A+ + + + HR + L ++
Sbjct: 306 FFSPLNPMRVHIEIGPD--GRVTGEADVEFATHEEAVPAMSKDRANMQHRYIELFLN 360
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ P+ + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++ T
Sbjct: 305 NFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEEAVPAMSKDRANMQHRYIELFLNSTTG 364
Query: 82 S 82
+
Sbjct: 365 A 365
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
++L+GLP+ C EDV+ FL I G+ + GR +G A+++ +++ + AL
Sbjct: 11 VVKLRGLPWSCSIEDVQNFLSDCTIRDGVAGVHFIYTREGRQSGEAFVELESEDDVKMAL 70
Query: 202 LRHKEKIGHRLVTLVMS 218
+ +E +GHR + + S
Sbjct: 71 KKDRESMGHRYIEVFKS 87
>gi|291412565|ref|XP_002722547.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like
[Oryctolagus cuniculus]
Length = 415
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 102/192 (53%), Gaps = 46/192 (23%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S DD + AL++ + +MG RYIE++
Sbjct: 51 GRQSGEAFVELESEDDVKMALKKDRESMGHRYIEVF------------------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ R+EMDW LK G + +A D +RL+GLP+ C KE++
Sbjct: 87 ------------------KSHRTEMDWVLKHSGPNSADTAND-GFVRLRGLPFGCTKEEI 127
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+F GLEIVPNGIT+P D G+ TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 128 VQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSS 187
Query: 220 AQW---FLSPPL 228
+ + PPL
Sbjct: 188 QEEVRSYSDPPL 199
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 106/245 (43%), Gaps = 59/245 (24%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY---M 76
QFF IVP I L D G+ +GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQ 188
Query: 77 EE-----------------------GTSS------KEAN------GRGTGGFGGVK---- 97
EE GT+ K+A G + G+GG +
Sbjct: 189 EEVRSYSDPPLKFMSVQRPGPYDRPGTARRYIGIVKQAGLERMRPGAYSAGYGGYEEYSG 248
Query: 98 -STPYGVGIFCISQFLA---KWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYE 153
S YG + L+ M + + ++A++ S C + ++GLPY+
Sbjct: 249 LSDGYGFTTDLFGRDLSYCLSGMYDHRYGDSEFAVQ--------STTGHC-VHMRGLPYK 299
Query: 154 CKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLV 213
+ D+ F L V I I D GR TG A ++F E A A+ + + + HR +
Sbjct: 300 ATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 357
Query: 214 TLVMS 218
L ++
Sbjct: 358 ELFLN 362
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++ T
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTG 366
Query: 82 SKEA 85
+
Sbjct: 367 ASNG 370
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
++L+GLP+ C EDV+ FL I G+ + GR +G A+++ +++ + AL
Sbjct: 13 VKLRGLPWSCSIEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELESEDDVKMALK 72
Query: 203 RHKEKIGHRLVTLVMS 218
+ +E +GHR + + S
Sbjct: 73 KDRESMGHRYIEVFKS 88
>gi|149690626|ref|XP_001490069.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like isoform 1
[Equus caballus]
gi|338717722|ref|XP_003363688.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Equus
caballus]
Length = 414
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 102/192 (53%), Gaps = 46/192 (23%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA +E S DD + AL++ + +MG RYIE++
Sbjct: 51 GRQSGEAFIELESEDDVKMALKKDRESMGHRYIEVF------------------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ R+EMDW LK G + +A D +RL+GLP+ C KE++
Sbjct: 87 ------------------KSHRTEMDWVLKHSGPNSADTAND-GFVRLRGLPFGCTKEEI 127
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+F GLEIVPNGIT+P D G+ TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 128 VQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSS 187
Query: 220 AQW---FLSPPL 228
+ + PPL
Sbjct: 188 QEEVRSYSDPPL 199
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 103/242 (42%), Gaps = 53/242 (21%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY---M 76
QFF IVP I L D G+ +GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQ 188
Query: 77 EE-----------------------GTSS------KEA------NGRGTGGFGGVK---- 97
EE GT+ K+A +G + G+GG +
Sbjct: 189 EEVRSYSDPPLKFMSVQRPGPYDRPGTARRYIGIVKQAGLERMRSGAYSAGYGGYEEYSG 248
Query: 98 -STPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKK 156
S YG + L+ + S M G S C + ++GLPY+ +
Sbjct: 249 LSDGYGFTTDLFGRDLSYCL-----SGMYDHRYGDGEFTVQSTTGHC-VHMRGLPYKATE 302
Query: 157 EDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLV 216
D+ F L V I I D GR TG A ++F E A A+ + + + HR + L
Sbjct: 303 NDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELF 360
Query: 217 MS 218
++
Sbjct: 361 LN 362
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++ T
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTG 366
Query: 82 SKEA 85
+
Sbjct: 367 ASNG 370
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
++L+GLP+ C EDV+ FL I G+ + GR +G A+I+ +++ + AL
Sbjct: 13 VKLRGLPWSCSIEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFIELESEDDVKMALK 72
Query: 203 RHKEKIGHRLVTLVMS 218
+ +E +GHR + + S
Sbjct: 73 KDRESMGHRYIEVFKS 88
>gi|62460420|ref|NP_001014860.1| heterogeneous nuclear ribonucleoprotein F [Bos taurus]
gi|426255584|ref|XP_004021428.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 1
[Ovis aries]
gi|426255586|ref|XP_004021429.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 2
[Ovis aries]
gi|426255588|ref|XP_004021430.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 3
[Ovis aries]
gi|75070041|sp|Q5E9J1.3|HNRPF_BOVIN RecName: Full=Heterogeneous nuclear ribonucleoprotein F;
Short=hnRNP F; Contains: RecName: Full=Heterogeneous
nuclear ribonucleoprotein F, N-terminally processed
gi|59858223|gb|AAX08946.1| heterogeneous nuclear ribonucleoprotein F [Bos taurus]
gi|74355042|gb|AAI02956.1| Heterogeneous nuclear ribonucleoprotein F [Bos taurus]
gi|296472206|tpg|DAA14321.1| TPA: heterogeneous nuclear ribonucleoprotein F [Bos taurus]
gi|440903473|gb|ELR54126.1| Heterogeneous nuclear ribonucleoprotein F, partial [Bos grunniens
mutus]
Length = 414
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 102/192 (53%), Gaps = 46/192 (23%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S DD + AL++ + +MG RYIE++
Sbjct: 51 GRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVF------------------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ R+EMDW LK G + +A D +RL+GLP+ C KE++
Sbjct: 87 ------------------KSHRTEMDWVLKHSGPNSADTAND-GFVRLRGLPFGCTKEEI 127
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+F GLEIVPNGIT+P D G+ TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 128 IQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSS 187
Query: 220 AQW---FLSPPL 228
+ + PPL
Sbjct: 188 QEEVRSYSDPPL 199
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 103/242 (42%), Gaps = 53/242 (21%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY---M 76
QFF IVP I L D G+ +GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQ 188
Query: 77 EE-----------------------GTSS------KEA------NGRGTGGFGGVK---- 97
EE GT+ K+A +G + G+GG +
Sbjct: 189 EEVRSYSDPPLKFMSVQRPGPYDRPGTARRYIGIVKQAGLERMRSGAYSAGYGGYEEYSG 248
Query: 98 -STPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKK 156
S YG + L+ + S M G S C + ++GLPY+ +
Sbjct: 249 LSDGYGFTTDLFGRDLSYCL-----SGMYDHRYGDGEFTVQSTTGHC-VHMRGLPYKATE 302
Query: 157 EDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLV 216
D+ F L V I I D GR TG A ++F E A A+ + + + HR + L
Sbjct: 303 NDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELF 360
Query: 217 MS 218
++
Sbjct: 361 LN 362
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++ T
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTG 366
Query: 82 SKEA 85
+
Sbjct: 367 ASNG 370
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
++L+GLP+ C EDV+ FL I G+ + GR +G A+++ +++ + AL
Sbjct: 12 VVKLRGLPWSCSVEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLAL 71
Query: 202 LRHKEKIGHRLVTLVMS 218
+ +E +GHR + + S
Sbjct: 72 KKDRESMGHRYIEVFKS 88
>gi|395851365|ref|XP_003798231.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Otolemur
garnettii]
Length = 415
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 99/190 (52%), Gaps = 43/190 (22%)
Query: 29 PVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGR 88
P I + GR SGEA VE S DD + AL++ + +MG RYIE++
Sbjct: 39 PGGIHFIYTREGRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVF------------- 85
Query: 89 GTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQ 148
++ R+EMDW LK G + SA D +RL+
Sbjct: 86 -----------------------------KSHRTEMDWVLKHSGPNSADSAND-GFVRLR 115
Query: 149 GLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKI 208
GLP+ C KE++ F GLEIVPNGIT+P D G+ TG A++QF +E AEKAL +HKE+I
Sbjct: 116 GLPFGCTKEEIVLFFTGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERI 175
Query: 209 GHRLVTLVMS 218
GHR + + S
Sbjct: 176 GHRYIEVFKS 185
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 100/241 (41%), Gaps = 58/241 (24%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIEL------------ 74
IVP I L D G+ +GEA V+F+S + A++AL +HK +G RYIE+
Sbjct: 135 IVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVRSYS 194
Query: 75 --------------YMEEGTSSK---------------EANGRGTGG---FGGVKSTPYG 102
Y GT+ + A G G +GG+ + YG
Sbjct: 195 DLPLKFMSVQRPGPYDRHGTARRYMGIVKQAGLERMRPGAYSAGYGAYEEYGGLSDSGYG 254
Query: 103 VGIFCISQFLA---KWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
+ + L+ M + + ++A+ + C+ ++GLPY+ + D+
Sbjct: 255 FATDVLGRDLSYCLSGMYDHRYGDGEFAVP---------STTGHCVHMRGLPYKATENDI 305
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
F L V I I D GR TG A ++F E A A+ + + + HR + L ++
Sbjct: 306 YNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNS 363
Query: 220 A 220
A
Sbjct: 364 A 364
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFL----- 361
Query: 82 SKEANGRGTGGFGGVKSTPYGV 103
A G G +GG GV
Sbjct: 362 -NSATGANNGAYGGQMVQGLGV 382
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEI--VPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
++L+GLP+ C EDV+ FL I P GI + GR +G A+++ +++ + AL
Sbjct: 11 VVKLRGLPWSCSIEDVQNFLSNCTIHDGPGGIHFIYTREGRQSGEAFVELGSEDDVKMAL 70
Query: 202 LRHKEKIGHRLVTLVMS 218
+ +E +GHR + + S
Sbjct: 71 KKDRESMGHRYIEVFKS 87
>gi|148667170|gb|EDK99586.1| mCG133010, isoform CRA_c [Mus musculus]
Length = 187
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 97/179 (54%), Gaps = 43/179 (24%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S DD + AL++ + +MG RYIE++
Sbjct: 51 GRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVF------------------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ R+EMDW LK G + SA D +RL+GLP+ C KE++
Sbjct: 87 ------------------KSHRTEMDWVLKHSGPNSADSAND-GFVRLRGLPFGCTKEEI 127
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+F GLEIVPNGIT+P D G+ TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 128 VQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKS 186
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D G+ +GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVF 184
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
++L+GLP+ C EDV+ FL I G+ + GR +G A+++ +++ + AL
Sbjct: 12 VVKLRGLPWSCSIEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLAL 71
Query: 202 LRHKEKIGHRLVTLVMS 218
+ +E +GHR + + S
Sbjct: 72 KKDRESMGHRYIEVFKS 88
>gi|344265353|ref|XP_003404749.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H [Loxodonta
africana]
Length = 449
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S DD + AL++ + MG RY+E++
Sbjct: 43 IRFIYTREGRPSGEAFVELESEDDVKLALKKDRETMGHRYVEVF---------------- 86
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 87 --------------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 119
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 120 FGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 179
Query: 212 LVTLVMS 218
+ + S
Sbjct: 180 YIEIFKS 186
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFL 361
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
++++GLP+ C E+V++F +I GI + GR +G A+++ +++ + AL
Sbjct: 12 VVKVRGLPWSCSAEEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDDVKLAL 71
Query: 202 LRHKEKIGHRLVTLVMS 218
+ +E +GHR V + S
Sbjct: 72 KKDRETMGHRYVEVFKS 88
>gi|54020837|ref|NP_001005664.1| heterogeneous nuclear ribonucleoprotein H1 (H) [Xenopus (Silurana)
tropicalis]
gi|49257786|gb|AAH74690.1| heterogeneous nuclear ribonucleoprotein H2 (H') [Xenopus (Silurana)
tropicalis]
gi|89269950|emb|CAJ83715.1| hnrph1 [Xenopus (Silurana) tropicalis]
Length = 441
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 96/179 (53%), Gaps = 43/179 (24%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VEF + +D + AL++ ++ MG RY+E++
Sbjct: 50 GRPSGEAFVEFETEEDLKLALKKDRATMGHRYVEVF------------------------ 85
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ EMDW LK G +A D +RL+GLP+ C KE++
Sbjct: 86 ------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRGLPFGCSKEEI 126
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 127 VQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKS 185
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 98/225 (43%), Gaps = 30/225 (13%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 128 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSR 187
Query: 80 TSSKEANGRGTGGFGGVKSTPY-----GVGIFCISQFLAKWMRRAKRSEM---------- 124
+ FG + PY G G + + + R A
Sbjct: 188 AEVRTHYDPPRKLFGMQRPGPYDRPGAGRGYNNLGRGFDRMRRGAYGGGYSGYEEYNGYN 247
Query: 125 DWAL-----------KRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGI 173
++A R G S + C+ ++GLPY + D+ F L V I
Sbjct: 248 EYAFGADQRFGRVSDSRYGDGTSFQSTTGHCVHMRGLPYRATETDIYTFFSPLNPVRVHI 307
Query: 174 TIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
I D GR TG A ++F E+A A+ + K + HR V L ++
Sbjct: 308 EIGAD--GRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLN 350
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVP--NGITIPHDYAGRCTGVAYIQFVDKENAE 198
D ++++GLP+ C +++E F +I +GI + GR +G A+++F +E+ +
Sbjct: 8 DGFVVKVRGLPWSCSHDEIENFFSECKIANGLSGIHFIYTREGRPSGEAFVEFETEEDLK 67
Query: 199 KALLRHKEKIGHRLVTLVMS 218
AL + + +GHR V + S
Sbjct: 68 LALKKDRATMGHRYVEVFKS 87
>gi|148237217|ref|NP_001085008.1| heterogeneous nuclear ribonucleoprotein H1 (H) [Xenopus laevis]
gi|47507485|gb|AAH70969.1| MGC78776 protein [Xenopus laevis]
Length = 441
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 95/179 (53%), Gaps = 43/179 (24%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VEF + DD Q A+++ ++ M RY+E++
Sbjct: 50 GRPSGEAFVEFETEDDLQLAVKKDRATMAHRYVEVF------------------------ 85
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ EMDW LK G +A D +RL+GLP+ C KE++
Sbjct: 86 ------------------KSNSVEMDWVLKHTGPNSPDTAND-GFVRLRGLPFGCSKEEI 126
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 127 VQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKS 185
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 100/226 (44%), Gaps = 32/226 (14%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 128 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSR 187
Query: 80 TSSKEANGRGTGGFGGVKSTPY-----GVGIFCISQFLAKWMRRAKRSEM-----DW--- 126
+ FG + PY G G + + + MRR D+
Sbjct: 188 AEVRTNYDPPRKLFGMQRPGPYDRPGAGRGYNNLGRGFDR-MRRGAYGGGYSGYEDYNGY 246
Query: 127 ------ALKRQGAVLSGSAVDQC--------CMRLQGLPYECKKEDVEKFLEGLEIVPNG 172
A +R G V D C+ ++GLPY + D+ F L V
Sbjct: 247 NEYAFGADQRFGRVSDNRYGDGSTFQSTTGHCVHMRGLPYRATETDIYTFFSPLNPVRVH 306
Query: 173 ITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
I I D GR TG A ++F E+A A+ + K + HR V L ++
Sbjct: 307 IEIGAD--GRVTGEADVEFASHEDAVAAMSKDKANMQHRYVELFLN 350
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--GT 80
FF P+ PV + + GR +GEADVEF+S +DA A+ + K+NM RY+EL++ G
Sbjct: 296 FFSPLNPVRVHIEIGADGRVTGEADVEFASHEDAVAAMSKDKANMQHRYVELFLNSTAGG 355
Query: 81 SSKEANGRGTGGFGGVKS-TPYG 102
S+ + + GG + T YG
Sbjct: 356 SNNAYSSQMMGGLAAAGAQTSYG 378
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVP--NGITIPHDYAGRCTGVAYIQFVDKENAE 198
D ++++GLP+ C +++E F +I +G+ + GR +G A+++F +++ +
Sbjct: 8 DGFVVKVRGLPWSCSHDEIENFFSESKIANGLSGVHFIYTREGRPSGEAFVEFETEDDLQ 67
Query: 199 KALLRHKEKIGHRLVTLVMSGA---QWFL------SPPLTNE 231
A+ + + + HR V + S + W L SP N+
Sbjct: 68 LAVKKDRATMAHRYVEVFKSNSVEMDWVLKHTGPNSPDTAND 109
>gi|344274318|ref|XP_003408964.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like
[Loxodonta africana]
Length = 414
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 102/192 (53%), Gaps = 46/192 (23%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S +D + AL++ + +MG RYIE++
Sbjct: 50 GRQSGEAFVELESEEDVKMALKKDRESMGHRYIEVF------------------------ 85
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ R+EMDW LK G + +A D +RL+GLP+ C KE++
Sbjct: 86 ------------------KSHRTEMDWVLKHSGPNSADTAND-GFVRLRGLPFGCTKEEI 126
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+F GLEI+PNGIT+P D G+ TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 127 VQFFSGLEIMPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSS 186
Query: 220 AQW---FLSPPL 228
+ + PPL
Sbjct: 187 QEEVRSYSDPPL 198
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 99/238 (41%), Gaps = 45/238 (18%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY---M 76
QFF I+P I L D G+ +GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 128 QFFSGLEIMPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQ 187
Query: 77 EE-----------------------GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLA 113
EE GT+ + GF ++S Y G ++
Sbjct: 188 EEVRSYSDPPLKFMSVQRPGPYDRPGTARRYIGIVKQAGFDRMRSGAYSTGYGGYEEY-- 245
Query: 114 KWMRRAKRSEMDWALKRQGAVLSG-------------SAVDQCCMRLQGLPYECKKEDVE 160
+ + D + LSG + C+ ++GLPY+ + D+
Sbjct: 246 SGLSDSYGFTTDLFGRDLSYCLSGMYDHRYGDSEFAVQSTTGHCVHMRGLPYKATENDIY 305
Query: 161 KFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
F L V I I D GR TG A ++F E A A+ + + + HR + L ++
Sbjct: 306 NFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLN 361
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++ T
Sbjct: 306 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTG 365
Query: 82 SKEA 85
+
Sbjct: 366 ASNG 369
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
++L+GLP+ C EDV+ FL +I G+ + GR +G A+++ +E+ + AL
Sbjct: 12 VKLRGLPWSCSIEDVQNFLSECKIHDGVAGVHFIYTREGRQSGEAFVELESEEDVKMALK 71
Query: 203 RHKEKIGHRLVTLVMS 218
+ +E +GHR + + S
Sbjct: 72 KDRESMGHRYIEVFKS 87
>gi|194219511|ref|XP_001497574.2| PREDICTED: heterogeneous nuclear ribonucleoprotein H [Equus
caballus]
Length = 456
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 94/179 (52%), Gaps = 43/179 (24%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 58 GRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF------------------------ 93
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ EMDW LK G +A D +RL+GLP+ C KE++
Sbjct: 94 ------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRGLPFGCSKEEI 134
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 135 VQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKS 193
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 314 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLN 369
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 136 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 191
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 297 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 354
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 355 DKANMQHRYVELFLN 369
>gi|395504896|ref|XP_003756782.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H [Sarcophilus
harrisii]
Length = 471
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 42 IRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF---------------- 85
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 86 --------------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 118
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 119 FGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 178
Query: 212 LVTLVMS 218
+ + S
Sbjct: 179 YIEIFKS 185
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 306 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFL 360
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 128 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 183
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 289 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 346
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 347 DKANMQHRYVELFLN 361
>gi|344246789|gb|EGW02893.1| Heterogeneous nuclear ribonucleoprotein H [Cricetulus griseus]
Length = 415
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 16 IRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF---------------- 59
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 60 --------------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 92
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 93 FGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 152
Query: 212 LVTLVMS 218
+ + S
Sbjct: 153 YIEIFKS 159
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 280 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLN 335
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 102 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 157
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 263 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 320
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 321 DKANMQHRYVELFLN 335
>gi|354486518|ref|XP_003505427.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H [Cricetulus
griseus]
Length = 447
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 18 IRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF---------------- 61
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 62 --------------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 94
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 95 FGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 154
Query: 212 LVTLVMS 218
+ + S
Sbjct: 155 YIEIFKS 161
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 282 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLN 337
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 104 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 159
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 265 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 322
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 323 DKANMQHRYVELFLN 337
>gi|327265516|ref|XP_003217554.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like [Anolis
carolinensis]
Length = 490
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 94/179 (52%), Gaps = 43/179 (24%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE + +D + AL++ + MG RY+E++
Sbjct: 81 GRPSGEAFVELETEEDVKSALKKDRETMGHRYVEVF------------------------ 116
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ EMDW LK G +A D +RL+GLP+ C KE++
Sbjct: 117 ------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRGLPFGCSKEEI 157
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 158 VQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKS 216
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 330 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFL 384
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 159 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 214
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 18/111 (16%)
Query: 126 WALKRQ--GAVLSGSAV--------------DQCCMRLQGLPYECKKEDVEKFLEGLEIV 169
WA RQ GAV G A + ++++GLP+ C ++V++F +I+
Sbjct: 8 WATPRQTLGAVTEGEAETTLTSSMMLNAEGGEGYVVKVRGLPWSCSADEVQRFFSECKIL 67
Query: 170 --PNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+G+ + GR +G A+++ +E+ + AL + +E +GHR V + S
Sbjct: 68 NGSSGVRFIYTREGRPSGEAFVELETEEDVKSALKKDRETMGHRYVEVFKS 118
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 313 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 370
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 371 DKANMQHRYVELFLN 385
>gi|351714509|gb|EHB17428.1| Heterogeneous nuclear ribonucleoprotein H, partial [Heterocephalus
glaber]
Length = 444
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 15 IRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF---------------- 58
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 59 --------------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 91
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 92 FGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 151
Query: 212 LVTLVMS 218
+ + S
Sbjct: 152 YIEIFKS 158
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 279 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLN 334
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 101 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 156
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 262 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 319
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 320 DKANMQHRYVELFLN 334
>gi|390459519|ref|XP_002744505.2| PREDICTED: heterogeneous nuclear ribonucleoprotein H [Callithrix
jacchus]
Length = 472
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 43 IRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF---------------- 86
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 87 --------------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 119
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 120 FGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 179
Query: 212 LVTLVMS 218
+ + S
Sbjct: 180 YIEIFKS 186
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFL 361
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
++++GLP+ C ++V++F +I GI + GR +G A+++ ++ + AL
Sbjct: 12 VVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLAL 71
Query: 202 LRHKEKIGHRLVTLVMS 218
+ +E +GHR V + S
Sbjct: 72 KKDRETMGHRYVEVFKS 88
>gi|440897190|gb|ELR48939.1| Heterogeneous nuclear ribonucleoprotein H [Bos grunniens mutus]
Length = 472
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 43 IRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF---------------- 86
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 87 --------------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 119
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 120 FGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 179
Query: 212 LVTLVMS 218
+ + S
Sbjct: 180 YIEIFKS 186
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFL 361
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
++++GLP+ C ++V++F +I GI + GR +G A+++ ++ + AL
Sbjct: 12 VVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLAL 71
Query: 202 LRHKEKIGHRLVTLVMS 218
+ +E +GHR V + S
Sbjct: 72 KKDRETMGHRYVEVFKS 88
>gi|441595657|ref|XP_004087258.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H isoform 2
[Nomascus leucogenys]
Length = 472
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 43 IRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF---------------- 86
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 87 --------------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 119
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 120 FGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 179
Query: 212 LVTLVMS 218
+ + S
Sbjct: 180 YIEIFKS 186
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLN 362
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
++++GLP+ C ++V++F +I GI + GR +G A+++ ++ + AL
Sbjct: 12 VVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLAL 71
Query: 202 LRHKEKIGHRLVTLVMS 218
+ +E +GHR V + S
Sbjct: 72 KKDRETMGHRYVEVFKS 88
>gi|261859020|dbj|BAI46032.1| heterogeneous nuclear ribonucleoprotein H1 [synthetic construct]
Length = 472
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 43 IRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF---------------- 86
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 87 --------------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 119
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 120 FGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 179
Query: 212 LVTLVMS 218
+ + S
Sbjct: 180 YIEIFKS 186
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLN 362
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
++++GLP+ C ++V++F +I GI + GR +G A+++ ++ + AL
Sbjct: 12 VVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLAL 71
Query: 202 LRHKEKIGHRLVTLVMS 218
+ +E +GHR V + S
Sbjct: 72 KKDRETMGHRYVEVFKS 88
>gi|402873628|ref|XP_003919688.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein H [Papio anubis]
Length = 472
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 43 IRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF---------------- 86
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 87 --------------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 119
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 120 FGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 179
Query: 212 LVTLVMS 218
+ + S
Sbjct: 180 YIEIFKS 186
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLN 362
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
++++GLP+ C ++V++F +I GI + GR +G A+++ ++ + AL
Sbjct: 12 VVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLAL 71
Query: 202 LRHKEKIGHRLVTLVMS 218
+ +E +GHR V + S
Sbjct: 72 KKDRETMGHRYVEVFKS 88
>gi|26353116|dbj|BAC40188.1| unnamed protein product [Mus musculus]
Length = 472
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 43 IRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF---------------- 86
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 87 --------------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 119
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 120 FGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 179
Query: 212 LVTLVMS 218
+ + S
Sbjct: 180 YIEIFKS 186
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLN 362
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQF 191
+L + ++++GLP+ C ++V++F +I GI + GR +G A+++
Sbjct: 2 MLGAEGGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVEL 61
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMS 218
++ + AL + +E +GHR V + S
Sbjct: 62 ESEDEVKLALKKDRETMGHRYVEVFKS 88
>gi|441595654|ref|XP_003279600.2| PREDICTED: heterogeneous nuclear ribonucleoprotein H isoform 1
[Nomascus leucogenys]
Length = 452
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 43 IRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF---------------- 86
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 87 --------------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 119
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 120 FGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 179
Query: 212 LVTLVMS 218
+ + S
Sbjct: 180 YIEIFKS 186
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLNSTAG 366
Query: 80 TSSKEANGRGTGGFGGVKSTPYG 102
S + GG G + YG
Sbjct: 367 ASGGAYGSQMMGGMGLSNQSSYG 389
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
++++GLP+ C ++V++F +I GI + GR +G A+++ ++ + AL
Sbjct: 12 VVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLAL 71
Query: 202 LRHKEKIGHRLVTLVMS 218
+ +E +GHR V + S
Sbjct: 72 KKDRETMGHRYVEVFKS 88
>gi|126290596|ref|XP_001369385.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H [Monodelphis
domestica]
Length = 449
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 43 IRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF---------------- 86
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 87 --------------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 119
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 120 FGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 179
Query: 212 LVTLVMS 218
+ + S
Sbjct: 180 YIEIFKS 186
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFL 361
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQF 191
+LS + ++++GLP+ C ++V++F +I +GI + GR +G A+++
Sbjct: 2 MLSTEGGEGFVVKVRGLPWSCSADEVQRFFSECKIQNGASGIRFIYTREGRPSGEAFVEL 61
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMS 218
++ + AL + +E +GHR V + S
Sbjct: 62 ESEDEVKLALKKDRETMGHRYVEVFKS 88
>gi|395853398|ref|XP_003799198.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H isoform 1
[Otolemur garnettii]
gi|395853400|ref|XP_003799199.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H isoform 2
[Otolemur garnettii]
gi|395853402|ref|XP_003799200.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H isoform 3
[Otolemur garnettii]
Length = 449
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 43 IRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF---------------- 86
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 87 --------------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 119
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 120 FGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 179
Query: 212 LVTLVMS 218
+ + S
Sbjct: 180 YIEIFKS 186
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFL 361
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
++++GLP+ C E+V++F +I GI + GR +G A+++ ++ + AL
Sbjct: 12 VVKVRGLPWSCSAEEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLAL 71
Query: 202 LRHKEKIGHRLVTLVMS 218
+ +E +GHR V + S
Sbjct: 72 KKDRETMGHRYVEVFKS 88
>gi|402911169|ref|XP_003918213.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like, partial
[Papio anubis]
Length = 256
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 43 IRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF---------------- 86
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 87 --------------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 119
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 120 FGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 179
Query: 212 LVTLVMS 218
+ + S
Sbjct: 180 YIEIFKS 186
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
++++GLP+ C ++V++F +I GI + GR +G A+++ ++ + AL
Sbjct: 12 VVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLAL 71
Query: 202 LRHKEKIGHRLVTLVMS 218
+ +E +GHR V + S
Sbjct: 72 KKDRETMGHRYVEVFKS 88
>gi|397477061|ref|XP_003809903.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H [Pan paniscus]
gi|426351280|ref|XP_004043181.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H [Gorilla
gorilla gorilla]
Length = 452
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 43 IRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF---------------- 86
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 87 --------------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 119
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 120 FGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 179
Query: 212 LVTLVMS 218
+ + S
Sbjct: 180 YIEIFKS 186
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLNSTAG 366
Query: 80 TSSKEANGRGTGGFGGVKSTPYG 102
S + GG G + YG
Sbjct: 367 ASGGAYGSQMMGGMGLSNQSSYG 389
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
++++GLP+ C ++V++F +I GI + GR +G A+++ ++ + AL
Sbjct: 12 VVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLAL 71
Query: 202 LRHKEKIGHRLVTLVMS 218
+ +E +GHR V + S
Sbjct: 72 KKDRETMGHRYVEVFKS 88
>gi|431892769|gb|ELK03202.1| Heterogeneous nuclear ribonucleoprotein H [Pteropus alecto]
Length = 435
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 43 IRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF---------------- 86
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 87 --------------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 119
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 120 FGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 179
Query: 212 LVTLVMS 218
+ + S
Sbjct: 180 YIEIFKS 186
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 94/231 (40%), Gaps = 38/231 (16%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE- 78
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSR 188
Query: 79 -------------------GTSSKEANGRGTGGFG---GVKSTPYGVGIFCISQFLAKWM 116
G + GRG G G + G +
Sbjct: 189 AEVRTHYDPPRKLMAMQRPGPYDRPGAGRGYNSIGRGAGFERMRRGAYGGGYGGYDDYNG 248
Query: 117 R---------RAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLE 167
R R D G+ S C + ++GLPY + D+ F L
Sbjct: 249 YNDGYGFGSDRFGRGMSDHRYGDGGSTFQ-STTGHC-VHMRGLPYRATENDIYNFFSPLN 306
Query: 168 IVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
V I I D GR TG A ++F E+A A+ + K + HR V L ++
Sbjct: 307 PVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLN 355
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
++++GLP+ C ++V++F +I GI + GR +G A+++ ++ + AL
Sbjct: 12 VVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLAL 71
Query: 202 LRHKEKIGHRLVTLVMS 218
+ +E +GHR V + S
Sbjct: 72 KKDRETMGHRYVEVFKS 88
>gi|148701752|gb|EDL33699.1| heterogeneous nuclear ribonucleoprotein H1, isoform CRA_b [Mus
musculus]
Length = 485
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 56 IRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF---------------- 99
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 100 --------------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 132
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 133 FGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 192
Query: 212 LVTLVMS 218
+ + S
Sbjct: 193 YIEIFKS 199
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 320 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLN 375
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 142 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 197
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 303 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 360
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 361 DKANMQHRYVELFLN 375
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQF 191
+L + ++++GLP+ C ++V++F +I GI + GR +G A+++
Sbjct: 15 MLGAEGGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVEL 74
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMS 218
++ + AL + +E +GHR V + S
Sbjct: 75 ESEDEVKLALKKDRETMGHRYVEVFKS 101
>gi|5031753|ref|NP_005511.1| heterogeneous nuclear ribonucleoprotein H [Homo sapiens]
gi|300794637|ref|NP_001180163.1| heterogeneous nuclear ribonucleoprotein H [Bos taurus]
gi|381342476|ref|NP_001244222.1| heterogeneous nuclear ribonucleoprotein H [Homo sapiens]
gi|73970381|ref|XP_857122.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H isoform 19
[Canis lupus familiaris]
gi|109080078|ref|XP_001099955.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H isoform 7
[Macaca mulatta]
gi|114603795|ref|XP_001150460.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H isoform 2 [Pan
troglodytes]
gi|291410134|ref|XP_002721348.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H1-like
[Oryctolagus cuniculus]
gi|301771512|ref|XP_002921169.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like
[Ailuropoda melanoleuca]
gi|311249564|ref|XP_003123691.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H [Sus scrofa]
gi|348551747|ref|XP_003461691.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like [Cavia
porcellus]
gi|403307005|ref|XP_003944005.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H isoform 1
[Saimiri boliviensis boliviensis]
gi|403307007|ref|XP_003944006.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H isoform 2
[Saimiri boliviensis boliviensis]
gi|410947937|ref|XP_003980698.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H [Felis catus]
gi|426228702|ref|XP_004008435.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H [Ovis aries]
gi|1710632|sp|P31943.4|HNRH1_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein H;
Short=hnRNP H; Contains: RecName: Full=Heterogeneous
nuclear ribonucleoprotein H, N-terminally processed
gi|347314|gb|AAA91346.1| hnRNP H [Homo sapiens]
gi|12655001|gb|AAH01348.1| HNRPH1 protein [Homo sapiens]
gi|119574192|gb|EAW53807.1| heterogeneous nuclear ribonucleoprotein H1 (H), isoform CRA_a [Homo
sapiens]
gi|119574193|gb|EAW53808.1| heterogeneous nuclear ribonucleoprotein H1 (H), isoform CRA_a [Homo
sapiens]
gi|193784895|dbj|BAG54048.1| unnamed protein product [Homo sapiens]
gi|296486243|tpg|DAA28356.1| TPA: heterogeneous nuclear ribonucleoprotein H1 (H) [Bos taurus]
Length = 449
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 43 IRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF---------------- 86
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 87 --------------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 119
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 120 FGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 179
Query: 212 LVTLVMS 218
+ + S
Sbjct: 180 YIEIFKS 186
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFL 361
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
++++GLP+ C ++V++F +I GI + GR +G A+++ ++ + AL
Sbjct: 12 VVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLAL 71
Query: 202 LRHKEKIGHRLVTLVMS 218
+ +E +GHR V + S
Sbjct: 72 KKDRETMGHRYVEVFKS 88
>gi|383417967|gb|AFH32197.1| heterogeneous nuclear ribonucleoprotein H2 [Macaca mulatta]
gi|410224062|gb|JAA09250.1| heterogeneous nuclear ribonucleoprotein H2 (H') [Pan troglodytes]
Length = 449
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 94/179 (52%), Gaps = 43/179 (24%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 51 GRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF------------------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ EMDW LK G +A D +RL+GLP+ C KE++
Sbjct: 87 ------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRGLPFGCSKEEI 127
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 128 VQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKS 186
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ P+ + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 307 NFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELFLNSTAG 366
Query: 80 TS 81
TS
Sbjct: 367 TS 368
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L + I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPD--GRVTGEADVEFATHEDAVAAMAK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQF 191
+LS + ++++GLP+ C ++V +F +I +GI + GR +G A+++
Sbjct: 2 MLSTEGREGFVVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVEL 61
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMS 218
++ + AL + +E +GHR V + S
Sbjct: 62 ESEDEVKLALKKDRETMGHRYVEVFKS 88
>gi|147906713|ref|NP_001086923.1| heterogeneous nuclear ribonucleoprotein H1 (H) [Xenopus laevis]
gi|50417963|gb|AAH77770.1| Hnrph2-prov protein [Xenopus laevis]
gi|84569955|gb|AAI10708.1| Hnrph2 protein [Xenopus laevis]
Length = 456
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 95/179 (53%), Gaps = 43/179 (24%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VEF + +D + L++ ++ MG RY+E++
Sbjct: 50 GRPSGEAFVEFETEEDLKLGLKKDRATMGHRYVEVF------------------------ 85
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ EMDW LK G +A D +RL+GLP+ C KE++
Sbjct: 86 ------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRGLPFGCSKEEI 126
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 127 VQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKS 185
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 99/226 (43%), Gaps = 32/226 (14%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 128 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSR 187
Query: 80 TSSKEANGRGTGGFGGVKSTPY-----GVGIFCISQFLAKWMRRAKRSEM---------- 124
+ FG + PY G G + + + MRR
Sbjct: 188 AEVRTHYDPPRKLFGMQRPGPYDRPGAGRGYNNLGRGFDR-MRRGAYGGGYSGYEDYNGY 246
Query: 125 -DWAL-----------KRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG 172
++A R G S + C+ ++GLPY + D+ F L V
Sbjct: 247 NEYAFGTDQRFGRVSDSRYGDGTSFQSTTGHCVHMRGLPYRATETDIYTFFSPLNPVRVH 306
Query: 173 ITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
I I D GR TG A ++F E+A A+ + K + HR V L ++
Sbjct: 307 IEIGAD--GRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLN 350
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 136 SGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVP--NGITIPHDYAGRCTGVAYIQFVD 193
S + D ++++GLP+ C +++E F +I +GI + GR +G A+++F
Sbjct: 3 SSESSDGFVVKVRGLPWSCSHDEIENFFSECKIANGLSGIHFIYTREGRPSGEAFVEFET 62
Query: 194 KENAEKALLRHKEKIGHRLVTLVMS 218
+E+ + L + + +GHR V + S
Sbjct: 63 EEDLKLGLKKDRATMGHRYVEVFKS 87
>gi|10946928|ref|NP_067485.1| heterogeneous nuclear ribonucleoprotein H [Mus musculus]
gi|46396669|sp|O35737.3|HNRH1_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein H;
Short=hnRNP H; Contains: RecName: Full=Heterogeneous
nuclear ribonucleoprotein H, N-terminally processed
gi|2253041|emb|CAA74583.1| heterogeneous nuclear ribonucleoprotein H [Mus musculus]
gi|33604202|gb|AAH56224.1| Heterogeneous nuclear ribonucleoprotein H1 [Mus musculus]
gi|37589940|gb|AAH42187.2| Heterogeneous nuclear ribonucleoprotein H1 [Mus musculus]
gi|74149585|dbj|BAE36421.1| unnamed protein product [Mus musculus]
gi|148701754|gb|EDL33701.1| heterogeneous nuclear ribonucleoprotein H1, isoform CRA_d [Mus
musculus]
gi|149052456|gb|EDM04273.1| heterogeneous nuclear ribonucleoprotein H1, isoform CRA_b [Rattus
norvegicus]
Length = 449
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 43 IRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF---------------- 86
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 87 --------------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 119
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 120 FGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 179
Query: 212 LVTLVMS 218
+ + S
Sbjct: 180 YIEIFKS 186
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFL 361
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQF 191
+L + ++++GLP+ C ++V++F +I GI + GR +G A+++
Sbjct: 2 MLGAEGGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVEL 61
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMS 218
++ + AL + +E +GHR V + S
Sbjct: 62 ESEDEVKLALKKDRETMGHRYVEVFKS 88
>gi|281351805|gb|EFB27389.1| hypothetical protein PANDA_010030 [Ailuropoda melanoleuca]
Length = 472
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 43 IRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF---------------- 86
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 87 --------------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 119
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 120 FGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 179
Query: 212 LVTLVMS 218
+ + S
Sbjct: 180 YIEIFKS 186
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLN 362
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
++++GLP+ C ++V++F +I GI + GR +G A+++ ++ + AL
Sbjct: 12 VVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLAL 71
Query: 202 LRHKEKIGHRLVTLVMS 218
+ +E +GHR V + S
Sbjct: 72 KKDRETMGHRYVEVFKS 88
>gi|48145673|emb|CAG33059.1| HNRPH1 [Homo sapiens]
Length = 449
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 43 IRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF---------------- 86
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 87 --------------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 119
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 120 FGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 179
Query: 212 LVTLVMS 218
+ + S
Sbjct: 180 YIEIFKS 186
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++ G
Sbjct: 129 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSG 188
Query: 80 T 80
Sbjct: 189 A 189
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFL 361
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
++++GLP+ C ++V++F +I GI + GR +G A+++ ++ + AL
Sbjct: 12 VVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLAL 71
Query: 202 LRHKEKIGHRLVTLVMS 218
+ +E +GHR V + S
Sbjct: 72 KKDRETMGHRYVEVFKS 88
>gi|120538378|gb|AAI29088.1| Hnrph1 protein [Rattus norvegicus]
Length = 429
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 43 IRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF---------------- 86
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 87 --------------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 119
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 120 FGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 179
Query: 212 LVTLVMS 218
+ + S
Sbjct: 180 YIEIFKS 186
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLNSTAG 366
Query: 80 TSSKEANGRGTGGFGGVKSTPYG 102
S + GG G + YG
Sbjct: 367 ASGGAYGSQMLGGMGLSNQSSYG 389
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQF 191
+L + ++++GLP+ C ++V++F +I GI + GR +G A+++
Sbjct: 2 MLGAEGGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVEL 61
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMS 218
++ + AL + +E +GHR V + S
Sbjct: 62 ESEDEVKLALKKDRETMGHRYVEVFKS 88
>gi|380792639|gb|AFE68195.1| heterogeneous nuclear ribonucleoprotein H, partial [Macaca mulatta]
Length = 269
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 43 IRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF---------------- 86
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 87 --------------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 119
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 120 FGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 179
Query: 212 LVTLVMS 218
+ + S
Sbjct: 180 YIEIFKS 186
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
++++GLP+ C ++V++F +I GI + GR +G A+++ ++ + AL
Sbjct: 13 VKVRGLPWSCSADEVQRFFSDCKIQNGAPGIRFIYTREGRPSGEAFVELESEDEVKLALK 72
Query: 203 RHKEKIGHRLVTLVMS 218
+ +E +GHR V + S
Sbjct: 73 KDRETMGHRYVEVFKS 88
>gi|119574194|gb|EAW53809.1| heterogeneous nuclear ribonucleoprotein H1 (H), isoform CRA_b [Homo
sapiens]
Length = 393
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 43 IRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF---------------- 86
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 87 --------------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 119
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 120 FGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 179
Query: 212 LVTLVMS 218
+ + S
Sbjct: 180 YIEIFKS 186
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ T+
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLNS-TA 365
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCIS 109
G+ GG+ Y +F +S
Sbjct: 366 GASGGAYGSQMLGGMGLCKYHFSVFFLS 393
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 44.3 bits (103), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
++++GLP+ C ++V++F +I GI + GR +G A+++ ++ + AL
Sbjct: 13 VKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALK 72
Query: 203 RHKEKIGHRLVTLVMS 218
+ +E +GHR V + S
Sbjct: 73 KDRETMGHRYVEVFKS 88
>gi|148707962|gb|EDL39909.1| mCG129396 [Mus musculus]
Length = 415
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 100/192 (52%), Gaps = 46/192 (23%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
G SGEA VE S DD + AL++ + +MG YIE++
Sbjct: 51 GSQSGEAFVELESEDDVKLALKKDRESMGHPYIEVF------------------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ R+EMDW LK G + SA D +RL+GLP+ C KE++
Sbjct: 87 ------------------KSHRTEMDWVLKHSGPNSADSAND-GFVRLRGLPFGCTKEEI 127
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+F GLEIVPNGIT+P D G+ TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 128 VQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSS 187
Query: 220 AQW---FLSPPL 228
+ + PPL
Sbjct: 188 QEEVRSYSDPPL 199
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P PV + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++ T
Sbjct: 307 NFFSPFNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTG 366
Query: 82 SKEA 85
+
Sbjct: 367 ASNG 370
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D G+ +GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVF 184
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
++L+GLP+ C EDV+ FL I G+ + G +G A+++ +++ + AL
Sbjct: 12 VVKLRGLPWSCSIEDVQNFLSDCTIHDGVAGVHFIYTREGSQSGEAFVELESEDDVKLAL 71
Query: 202 LRHKEKIGHRLVTLVMS 218
+ +E +GH + + S
Sbjct: 72 KKDRESMGHPYIEVFKS 88
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+ ++GLPY+ + D+ F V I I D GR TG A ++F E A A+ +
Sbjct: 291 VHMRGLPYKATENDIYNFFSPFNPVRVHIEIGPD--GRVTGEADVEFATHEEAVAAMSKD 348
Query: 205 KEKIGHRLVTLVMS 218
+ + HR + L ++
Sbjct: 349 RANMQHRYIELFLN 362
>gi|326928641|ref|XP_003210484.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like
[Meleagris gallopavo]
Length = 477
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 96/189 (50%), Gaps = 43/189 (22%)
Query: 30 VNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRG 89
+ I + GR SGEA E S +D + AL++ + MG RY+E++
Sbjct: 56 LGIRFIYTREGRPSGEAFAELESEEDVKLALKKDRETMGHRYVEVF-------------- 101
Query: 90 TGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQG 149
++ EMDW LK G +A D +RL+G
Sbjct: 102 ----------------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRG 132
Query: 150 LPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIG 209
LP+ C KE++ +F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IG
Sbjct: 133 LPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIG 192
Query: 210 HRLVTLVMS 218
HR + + S
Sbjct: 193 HRYIEIFKS 201
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 315 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFL 369
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 144 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 199
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYA--GRCTGVAYIQF 191
+L+ + + ++++GLP+ C E+V++F +I+ + I Y GR +G A+ +
Sbjct: 17 MLNTESSEGYVVKVRGLPWSCSTEEVQRFFSDCKILNGALGIRFIYTREGRPSGEAFAEL 76
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMS 218
+E+ + AL + +E +GHR V + S
Sbjct: 77 ESEEDVKLALKKDRETMGHRYVEVFKS 103
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 298 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 355
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 356 DKANMQHRYVELFLN 370
>gi|45383173|ref|NP_989827.1| heterogeneous nuclear ribonucleoprotein H [Gallus gallus]
gi|33521618|gb|AAQ20009.1| heterogeneous nuclear ribonucleoprotein H1-like protein [Gallus
gallus]
Length = 519
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 96/189 (50%), Gaps = 43/189 (22%)
Query: 30 VNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRG 89
+ I + GR SGEA E S +D + AL++ + MG RY+E++
Sbjct: 91 LGIRFIYTREGRPSGEAFAELESEEDVKLALKKDRETMGHRYVEVF-------------- 136
Query: 90 TGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQG 149
++ EMDW LK G +A D +RL+G
Sbjct: 137 ----------------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRG 167
Query: 150 LPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIG 209
LP+ C KE++ +F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IG
Sbjct: 168 LPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIG 227
Query: 210 HRLVTLVMS 218
HR + + S
Sbjct: 228 HRYIEIFKS 236
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 357 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFL 411
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 179 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 234
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYA--GRCTGVAYIQF 191
+L+ + + ++++GLP+ C E+V++F +I+ + I Y GR +G A+ +
Sbjct: 52 MLNTESSEGYVVKVRGLPWSCSTEEVQRFFSDCKILNGALGIRFIYTREGRPSGEAFAEL 111
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMS 218
+E+ + AL + +E +GHR V + S
Sbjct: 112 ESEEDVKLALKKDRETMGHRYVEVFKS 138
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 340 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 397
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 398 DKANMQHRYVELFLN 412
>gi|355691923|gb|EHH27108.1| hypothetical protein EGK_17225 [Macaca mulatta]
Length = 472
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 95/187 (50%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S D+ + AL+ + MG RY+E++
Sbjct: 43 IRFIYTREGRPSGEAFVELESEDEVKLALKEDRETMGHRYVEVF---------------- 86
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 87 --------------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 119
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 120 FGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 179
Query: 212 LVTLVMS 218
+ + S
Sbjct: 180 YIEIFKS 186
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFL 361
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
++++GLP+ C ++V++F +I GI + GR +G A+++ ++ + AL
Sbjct: 12 VVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLAL 71
Query: 202 LRHKEKIGHRLVTLVMS 218
+E +GHR V + S
Sbjct: 72 KEDRETMGHRYVEVFKS 88
>gi|442755167|gb|JAA69743.1| Putative splicing factor hnrnp-f [Ixodes ricinus]
Length = 279
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 102/201 (50%), Gaps = 46/201 (22%)
Query: 31 NILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGT 90
I + GR SGEA VE S DD + AL++ + MG RYIE++
Sbjct: 42 GIHFIYTREGRQSGEAFVELESEDDVKMALKKDRERMGHRYIEVF--------------- 86
Query: 91 GGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGL 150
++ R+EMDW LK G + +A D +RL+GL
Sbjct: 87 ---------------------------KSHRTEMDWVLKHSGPNSADTAND-GFVRLRGL 118
Query: 151 PYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGH 210
P+ C KE++ +F GLEIVPN IT+P D G+ TG A++QF +E AEKAL +HKE+IGH
Sbjct: 119 PFGCTKEEIVQFFSGLEIVPNRITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGH 178
Query: 211 RLVTLVMSGAQ---WFLSPPL 228
R + + S + + PPL
Sbjct: 179 RYIEVFKSSQEKVGSYSDPPL 199
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPH---DYAGRCTGVAYIQFVDKENAEKA 200
++L+GLP+ C EDV+ FL G I+ +G++ H GR +G A+++ +++ + A
Sbjct: 12 VVKLRGLPWSCSVEDVQNFLSGC-IIHDGVSGIHFIYTREGRQSGEAFVELESEDDVKMA 70
Query: 201 LLRHKEKIGHRLVTLVMS 218
L + +E++GHR + + S
Sbjct: 71 LKKDRERMGHRYIEVFKS 88
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 6/68 (8%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
QFF IVP I L D G+ +GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNRITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVF---- 184
Query: 80 TSSKEANG 87
SS+E G
Sbjct: 185 KSSQEKVG 192
>gi|53127638|emb|CAG31148.1| hypothetical protein RCJMB04_2m14 [Gallus gallus]
Length = 492
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 96/189 (50%), Gaps = 43/189 (22%)
Query: 30 VNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRG 89
+ I + GR SGEA E S +D + AL++ + MG RY+E++
Sbjct: 71 LGIRFIYTREGRPSGEAFAELESEEDVKLALKKDRETMGHRYVEVF-------------- 116
Query: 90 TGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQG 149
++ EMDW LK G +A D +RL+G
Sbjct: 117 ----------------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRG 147
Query: 150 LPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIG 209
LP+ C KE++ +F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IG
Sbjct: 148 LPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIG 207
Query: 210 HRLVTLVMS 218
HR + + S
Sbjct: 208 HRYIEIFKS 216
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 330 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFL 384
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 159 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 214
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 313 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 370
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 371 DKANMQHRYVELFLN 385
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYA--GRCTGVAYIQF 191
+L+ + + ++++GLP+ C E+V++F +I+ + I Y GR +G A+ +
Sbjct: 32 MLNTESSEGYVVKVRGLPWSCSTEEVQRFFSDCKILNGALGIRFIYTREGRPSGEAFAEL 91
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMS 218
+E+ + AL + +E +GHR V + S
Sbjct: 92 ESEEDVKLALKKDRETMGHRYVEVFKS 118
>gi|449474971|ref|XP_002195792.2| PREDICTED: heterogeneous nuclear ribonucleoprotein H [Taeniopygia
guttata]
Length = 419
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 96/189 (50%), Gaps = 43/189 (22%)
Query: 30 VNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRG 89
+ I + GR SGEA E S +D + AL++ + MG RY+E++
Sbjct: 22 LGIRFIYTREGRPSGEAFAELESEEDVKLALKKDRETMGHRYVEVF-------------- 67
Query: 90 TGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQG 149
++ EMDW LK G +A D +RL+G
Sbjct: 68 ----------------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRG 98
Query: 150 LPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIG 209
LP+ C KE++ +F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IG
Sbjct: 99 LPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIG 158
Query: 210 HRLVTLVMS 218
HR + + S
Sbjct: 159 HRYIEIFKS 167
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 288 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFL 342
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 110 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 165
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 271 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 328
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 329 DKANMQHRYVELFLN 343
>gi|148688440|gb|EDL20387.1| heterogeneous nuclear ribonucleoprotein H2, isoform CRA_b [Mus
musculus]
Length = 460
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 94/179 (52%), Gaps = 43/179 (24%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 62 GRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF------------------------ 97
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ EMDW LK G +A D +RL+GLP+ C KE++
Sbjct: 98 ------------------KSNSVEMDWVLKHTGPNSPDTAND-GFVRLRGLPFGCSKEEI 138
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+F GLEIVPNG+T+P D+ GR TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 139 VQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKS 197
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ P+ + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 318 NFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELFLNSTAG 377
Query: 80 TS 81
TS
Sbjct: 378 TS 379
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP + L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 140 QFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 195
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L + I I D GR TG A ++F E+A A+ +
Sbjct: 301 CVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPD--GRVTGEADVEFATHEDAVAAMAK 358
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 359 DKANMQHRYVELFLN 373
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQF 191
+LS + ++++GLP+ C E+V +F +I +G+ + GR +G A+++
Sbjct: 13 MLSTEGREGFVVKVRGLPWSCSAEEVMRFFSDCKIQNGTSGVRFIYTREGRPSGEAFVEL 72
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA---QWFL------SPPLTNE 231
++ + AL + +E +GHR V + S + W L SP N+
Sbjct: 73 ESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHTGPNSPDTAND 121
>gi|62078769|ref|NP_001014041.1| heterogeneous nuclear ribonucleoprotein H2 [Rattus norvegicus]
gi|81910860|sp|Q6AY09.1|HNRH2_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein H2;
Short=hnRNP H2; AltName: Full=Heterogeneous nuclear
ribonucleoprotein H'; Short=hnRNP H'
gi|50927747|gb|AAH79240.1| Heterogeneous nuclear ribonucleoprotein H2 (H') [Rattus norvegicus]
gi|149055432|gb|EDM07016.1| similar to Murine homolog of human ftp-3, isoform CRA_a [Rattus
norvegicus]
gi|149055433|gb|EDM07017.1| similar to Murine homolog of human ftp-3, isoform CRA_a [Rattus
norvegicus]
Length = 449
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 94/179 (52%), Gaps = 43/179 (24%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 51 GRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF------------------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ EMDW LK G +A D +RL+GLP+ C KE++
Sbjct: 87 ------------------KSNSVEMDWVLKHTGPNSPDTAND-GFVRLRGLPFGCSKEEI 127
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+F GLEIVPNG+T+P D+ GR TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 128 VQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKS 186
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ P+ + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 307 NFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELFLNSTAG 366
Query: 80 TS 81
TS
Sbjct: 367 TS 368
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP + L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L + I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPD--GRVTGEADVEFATHEDAVAAMAK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQF 191
+LS + ++++GLP+ C E+V +F +I +G+ + GR +G A+++
Sbjct: 2 MLSTEGREGFVVKVRGLPWSCSAEEVMRFFSDCKIQNGTSGVRFIYTREGRPSGEAFVEL 61
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA---QWFL------SPPLTNE 231
++ + AL + +E +GHR V + S + W L SP N+
Sbjct: 62 ESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHTGPNSPDTAND 110
>gi|9845253|ref|NP_063921.1| heterogeneous nuclear ribonucleoprotein H2 [Mus musculus]
gi|354474917|ref|XP_003499676.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform 1
[Cricetulus griseus]
gi|354474919|ref|XP_003499677.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform 2
[Cricetulus griseus]
gi|46577330|sp|P70333.1|HNRH2_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein H2;
Short=hnRNP H2; AltName: Full=Heterogeneous nuclear
ribonucleoprotein H'; Short=hnRNP H'
gi|1666700|gb|AAB47243.1| Murine homolog of human ftp-3 [Mus musculus]
gi|13529467|gb|AAH05461.1| Hnrph2 protein [Mus musculus]
gi|26346655|dbj|BAC36976.1| unnamed protein product [Mus musculus]
gi|74139495|dbj|BAE40886.1| unnamed protein product [Mus musculus]
gi|74207684|dbj|BAE40087.1| unnamed protein product [Mus musculus]
gi|74211079|dbj|BAE37634.1| unnamed protein product [Mus musculus]
gi|148688439|gb|EDL20386.1| heterogeneous nuclear ribonucleoprotein H2, isoform CRA_a [Mus
musculus]
gi|148688441|gb|EDL20388.1| heterogeneous nuclear ribonucleoprotein H2, isoform CRA_a [Mus
musculus]
gi|344238071|gb|EGV94174.1| Heterogeneous nuclear ribonucleoprotein H2 [Cricetulus griseus]
Length = 449
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 94/179 (52%), Gaps = 43/179 (24%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 51 GRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF------------------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ EMDW LK G +A D +RL+GLP+ C KE++
Sbjct: 87 ------------------KSNSVEMDWVLKHTGPNSPDTAND-GFVRLRGLPFGCSKEEI 127
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+F GLEIVPNG+T+P D+ GR TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 128 VQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKS 186
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ P+ + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 307 NFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELFLNSTAG 366
Query: 80 TS 81
TS
Sbjct: 367 TS 368
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP + L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L + I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPD--GRVTGEADVEFATHEDAVAAMAK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQF 191
+LS + ++++GLP+ C E+V +F +I +G+ + GR +G A+++
Sbjct: 2 MLSTEGREGFVVKVRGLPWSCSAEEVMRFFSDCKIQNGTSGVRFIYTREGRPSGEAFVEL 61
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA---QWFL------SPPLTNE 231
++ + AL + +E +GHR V + S + W L SP N+
Sbjct: 62 ESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHTGPNSPDTAND 110
>gi|432101976|gb|ELK29797.1| Heterogeneous nuclear ribonucleoprotein H2 [Myotis davidii]
Length = 449
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 94/179 (52%), Gaps = 43/179 (24%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 51 GRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF------------------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ EMDW LK G +A D +RL+GLP+ C KE++
Sbjct: 87 ------------------KSNSVEMDWVLKHTGPNSPDTAND-GFVRLRGLPFGCSKEEI 127
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+F GLEIVPNG+T+P D+ GR TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 128 VQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKS 186
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ P+ + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 307 NFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELFLNSTAG 366
Query: 80 TS 81
TS
Sbjct: 367 TS 368
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP + L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L + I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPD--GRVTGEADVEFATHEDAVAAMAK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQF 191
+LS + ++++GLP+ C ++V +F +I +GI + GR +G A+++
Sbjct: 2 MLSTEGREGFVVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVEL 61
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA---QWFL------SPPLTNE 231
++ + AL + +E +GHR V + S + W L SP N+
Sbjct: 62 ESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHTGPNSPDTAND 110
>gi|74007970|ref|XP_861916.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform 3
[Canis lupus familiaris]
gi|345807788|ref|XP_862053.2| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform 7
[Canis lupus familiaris]
Length = 449
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 94/179 (52%), Gaps = 43/179 (24%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 51 GRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF------------------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ EMDW LK G +A D +RL+GLP+ C KE++
Sbjct: 87 ------------------KSNSVEMDWVLKHTGPNSPDTAND-GFVRLRGLPFGCSKEEI 127
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+F GLEIVPNG+T+P D+ GR TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 128 VQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKS 186
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ P+ + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 307 NFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELFLNSTAG 366
Query: 80 TS 81
TS
Sbjct: 367 TS 368
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP + L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L + I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPD--GRVTGEADVEFATHEDAVAAMAK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQF 191
+LS + ++++GLP+ C ++V +F +I +GI + GR +G A+++
Sbjct: 2 MLSTEGREGFVVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVEL 61
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA---QWFL------SPPLTNE 231
++ + AL + +E +GHR V + S + W L SP N+
Sbjct: 62 ESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHTGPNSPDTAND 110
>gi|348570626|ref|XP_003471098.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2-like [Cavia
porcellus]
Length = 449
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 94/179 (52%), Gaps = 43/179 (24%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 51 GRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF------------------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ EMDW LK G +A D +RL+GLP+ C KE++
Sbjct: 87 ------------------KSNSVEMDWVLKHTGPNSPDTAND-GFVRLRGLPFGCSKEEI 127
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+F GLEIVPNG+T+P D+ GR TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 128 VQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKS 186
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ P+ + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 307 NFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELFLNSTAG 366
Query: 80 TS 81
TS
Sbjct: 367 TS 368
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP + L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L + I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPD--GRVTGEADVEFATHEDAVAAMAK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQF 191
+LS + ++++GLP+ C ++V +F +I +GI + GR +G A+++
Sbjct: 2 MLSTEGREGFVVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVEL 61
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA---QWFL------SPPLTNE 231
++ + AL + +E +GHR V + S + W L SP N+
Sbjct: 62 ESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHTGPNSPDTAND 110
>gi|301788126|ref|XP_002929479.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2-like
[Ailuropoda melanoleuca]
gi|344306831|ref|XP_003422087.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2-like
[Loxodonta africana]
Length = 432
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 43 IRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF---------------- 86
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 87 --------------------------KSNSVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 119
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNG+T+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 120 FGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 179
Query: 212 LVTLVMS 218
+ + S
Sbjct: 180 YIEIFKS 186
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ P+ + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 307 NFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELFLNSTAG 366
Query: 80 TSSKEANGRGT---GGFGGVKSTPYG 102
T+ G+ GG G + YG
Sbjct: 367 TTGASGGAYGSQMMGGMGLSNQSSYG 392
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP + L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L + I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPD--GRVTGEADVEFATHEDAVAAMAK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQF 191
+LS + ++++GLP+ C ++V +F +I +GI + GR +G A+++
Sbjct: 2 MLSTEGREGFVVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVEL 61
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA---QWFL------SPPLTNE 231
++ + AL + +E +GHR V + S + W L SP N+
Sbjct: 62 ESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHTGPNSPDTAND 110
>gi|410989009|ref|XP_004000762.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 [Felis catus]
Length = 432
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 43 IRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF---------------- 86
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 87 --------------------------KSNSVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 119
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNG+T+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 120 FGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 179
Query: 212 LVTLVMS 218
+ + S
Sbjct: 180 YIEIFKS 186
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ P+ + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 307 NFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELFLNSTAG 366
Query: 80 TSSKEANGRGT---GGFGGVKSTPYG 102
T+ G+ GG G + YG
Sbjct: 367 TTGASGGAYGSQMMGGMGLSNQSSYG 392
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP + L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L + I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPD--GRVTGEADVEFATHEDAVAAMAK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQF 191
+LS + ++++GLP+ C ++V +F +I +GI + GR +G A+++
Sbjct: 2 MLSTEGREGFVVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVEL 61
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA---QWFL------SPPLTNE 231
++ + AL + +E +GHR V + S + W L SP N+
Sbjct: 62 ESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHTGPNSPDTAND 110
>gi|426257857|ref|XP_004022538.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 [Ovis aries]
gi|146231796|gb|ABQ12973.1| heterogeneous nuclear ribonucleoprotein H2 [Bos taurus]
gi|296471005|tpg|DAA13120.1| TPA: heterogeneous nuclear ribonucleoprotein H2 [Bos taurus]
gi|440901707|gb|ELR52599.1| Heterogeneous nuclear ribonucleoprotein H2 [Bos grunniens mutus]
Length = 449
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 43 IRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF---------------- 86
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 87 --------------------------KSNSVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 119
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNG+T+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 120 FGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 179
Query: 212 LVTLVMS 218
+ + S
Sbjct: 180 YIEIFKS 186
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ P+ + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 307 NFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELFLNSTAG 366
Query: 80 TS 81
TS
Sbjct: 367 TS 368
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP + L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L + I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPD--GRVTGEADVEFATHEDAVAAMAK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQF 191
+LS + ++++GLP+ C ++V +F +I +GI + GR +G A+++
Sbjct: 2 MLSTEGREGFVVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVEL 61
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA---QWFL------SPPLTNE 231
++ + AL + +E +GHR V + S + W L SP N+
Sbjct: 62 ESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHTGPNSPDTAND 110
>gi|115496520|ref|NP_001069476.1| heterogeneous nuclear ribonucleoprotein H2 [Bos taurus]
gi|109892458|sp|Q3SZF3.1|HNRH2_BOVIN RecName: Full=Heterogeneous nuclear ribonucleoprotein H2;
Short=hnRNP H2; AltName: Full=Heterogeneous nuclear
ribonucleoprotein H'; Short=hnRNP H'
gi|74354329|gb|AAI02895.1| Heterogeneous nuclear ribonucleoprotein H2 (H') [Bos taurus]
Length = 449
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 43 IRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF---------------- 86
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 87 --------------------------KSNSVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 119
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNG+T+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 120 FGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 179
Query: 212 LVTLVMS 218
+ + S
Sbjct: 180 YIEIFKS 186
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ P+ + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 307 NFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELFLNSTAG 366
Query: 80 TS 81
TS
Sbjct: 367 TS 368
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP + L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L + I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPD--GRVTGEADVEFATHEDAVAAMAK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQF 191
+LS + ++++GLP+ C ++V +F +I +GI + GR +G A+++
Sbjct: 2 MLSTEGREGFVVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVEL 61
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA---QWFL------SPPLTNE 231
++ + AL + +E +GHR V + S + W L SP N+
Sbjct: 62 ESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHTGPNSPDTAND 110
>gi|395861473|ref|XP_003803009.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 [Otolemur
garnettii]
Length = 432
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 94/179 (52%), Gaps = 43/179 (24%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 51 GRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF------------------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ EMDW LK G +A D +RL+GLP+ C KE++
Sbjct: 87 ------------------KSNSVEMDWVLKHTGPNSPDTAND-GFVRLRGLPFGCSKEEI 127
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+F GLEIVPNG+T+P D+ GR TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 128 VQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKS 186
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ P+ + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 307 NFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELFLNSTAG 366
Query: 82 SKEANGRG-----TGGFGGVKSTPYG 102
+ A+G GG G + YG
Sbjct: 367 TTGASGGAYDSQMMGGMGLSNQSSYG 392
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP + L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L + I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPD--GRVTGEADVEFATHEDAVAAMAK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQF 191
+LS + ++++GLP+ C ++V +F +I +GI + GR +G A+++
Sbjct: 2 MLSTEGREGFVVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVEL 61
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA---QWFL------SPPLTNE 231
++ + AL + +E +GHR V + S + W L SP N+
Sbjct: 62 ESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHTGPNSPDTAND 110
>gi|149755198|ref|XP_001493828.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 [Equus
caballus]
gi|291393212|ref|XP_002713068.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 [Oryctolagus
cuniculus]
gi|291408077|ref|XP_002720410.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2-like
[Oryctolagus cuniculus]
gi|281341597|gb|EFB17181.1| hypothetical protein PANDA_019663 [Ailuropoda melanoleuca]
Length = 449
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 94/179 (52%), Gaps = 43/179 (24%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 51 GRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF------------------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ EMDW LK G +A D +RL+GLP+ C KE++
Sbjct: 87 ------------------KSNSVEMDWVLKHTGPNSPDTAND-GFVRLRGLPFGCSKEEI 127
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+F GLEIVPNG+T+P D+ GR TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 128 VQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKS 186
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ P+ + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 307 NFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELFLNSTAG 366
Query: 80 TS 81
TS
Sbjct: 367 TS 368
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP + L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L + I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPD--GRVTGEADVEFATHEDAVAAMAK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQF 191
+LS + ++++GLP+ C ++V +F +I +GI + GR +G A+++
Sbjct: 2 MLSTEGREGFVVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVEL 61
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA---QWFL------SPPLTNE 231
++ + AL + +E +GHR V + S + W L SP N+
Sbjct: 62 ESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHTGPNSPDTAND 110
>gi|431895711|gb|ELK05132.1| Heterogeneous nuclear ribonucleoprotein H2 [Pteropus alecto]
Length = 422
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 94/179 (52%), Gaps = 43/179 (24%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 24 GRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF------------------------ 59
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ EMDW LK G +A D +RL+GLP+ C KE++
Sbjct: 60 ------------------KSNSVEMDWVLKHTGPNSPDTAND-GFVRLRGLPFGCSKEEI 100
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+F GLEIVPNG+T+P D+ GR TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 101 VQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKS 159
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ P+ + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 280 NFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELFLNSTAG 339
Query: 80 TS 81
TS
Sbjct: 340 TS 341
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP + L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 102 QFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 157
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L + I I D GR TG A ++F E+A A+ +
Sbjct: 263 CVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPD--GRVTGEADVEFATHEDAVAAMAK 320
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 321 DKANMQHRYVELFLN 335
>gi|351712921|gb|EHB15840.1| Heterogeneous nuclear ribonucleoprotein H2 [Heterocephalus glaber]
Length = 416
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 96/189 (50%), Gaps = 43/189 (22%)
Query: 30 VNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRG 89
I + GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 41 AGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF-------------- 86
Query: 90 TGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQG 149
++ EMDW LK G +A D +RL+G
Sbjct: 87 ----------------------------KSNSVEMDWVLKHTGPNSPDTAND-GFVRLRG 117
Query: 150 LPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIG 209
LP+ C KE++ +F GLEIVPNG+T+P D+ GR TG A++QF +E AEKAL +HKE+IG
Sbjct: 118 LPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIG 177
Query: 210 HRLVTLVMS 218
HR V + S
Sbjct: 178 HRHVEIFKS 186
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ P+ + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 307 NFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELFLNSTAG 366
Query: 80 TS 81
TS
Sbjct: 367 TS 368
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP + L D GRS+GEA V+F+S + A++AL++HK +G R++E++
Sbjct: 129 QFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRHVEIF 184
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L + I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPD--GRVTGEADVEFATHEDAVAAMAK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 11/109 (10%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQF 191
+LS + ++++GLP+ C ++V +F +I GI + GR +G A+++
Sbjct: 2 MLSTEGREGFVVKVRGLPWSCSADEVMRFFSDCKIQNGTAGIRFIYTREGRPSGEAFVEL 61
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA---QWFL------SPPLTNE 231
++ + AL + +E +GHR V + S + W L SP N+
Sbjct: 62 ESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHTGPNSPDTAND 110
>gi|417401138|gb|JAA47465.1| Putative splicing factor hnrnp-f [Desmodus rotundus]
Length = 449
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 43 IRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF---------------- 86
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 87 --------------------------KSNSVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 119
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNG+T+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 120 FGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 179
Query: 212 LVTLVMS 218
+ + S
Sbjct: 180 YIEIFKS 186
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ P+ + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 307 NFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELFLNSTAG 366
Query: 80 TS 81
TS
Sbjct: 367 TS 368
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP + L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L + I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPD--GRVTGEADVEFATHEDAVAAMAK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
++++GLP+ C ++V +F +I +GI + GR +G A+++ ++ + AL
Sbjct: 12 VVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEDEVKLAL 71
Query: 202 LRHKEKIGHRLVTLVMSGA---QWFL------SPPLTNE 231
+ +E +GHR V + S + W L SP N+
Sbjct: 72 KKDRETMGHRYVEVFKSNSVEMDWVLKHTGPNSPDTAND 110
>gi|148886840|sp|Q8VHV7.2|HNRH1_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein H;
Short=hnRNP H; AltName: Full=Ratsg1; Contains: RecName:
Full=Heterogeneous nuclear ribonucleoprotein H,
N-terminally processed
Length = 449
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 43 IRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF---------------- 86
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 87 --------------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 119
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C +E++ +F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 120 FGCSEEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 179
Query: 212 LVTLVMS 218
+ + S
Sbjct: 180 YIEIFKS 186
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 38/55 (69%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV + + T GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 307 NFFSPLNPVRVHIETGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFL 361
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPVRVHIETGPD--GRVTGEADVEFATHEDAVAAMSK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQF 191
+L + ++++GLP+ C ++V++F +I GI + GR +G A+++
Sbjct: 2 MLGAEGGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVEL 61
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMS 218
++ + AL + +E +GHR V + S
Sbjct: 62 ESEDEVKLALKKDRETMGHRYVEVFKS 88
>gi|159155917|gb|AAI54577.1| Heterogeneous nuclear ribonucleoprotein H1 [Danio rerio]
Length = 403
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 94/179 (52%), Gaps = 43/179 (24%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VEF S +D + A+++ + MG RY+E++
Sbjct: 47 GRPSGEAFVEFESEEDLKSAVKKDRETMGHRYVEVF------------------------ 82
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ EMDW LK G + D +RL+GLP+ C KE++
Sbjct: 83 ------------------KSNSVEMDWVLKHTGPNCPDTGGD-GLVRLRGLPFGCSKEEI 123
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+F GLEIVPNGIT+P D+ GR TG A++QF ++ AEKAL +HKE+IGHR + + S
Sbjct: 124 VQFFAGLEIVPNGITLPVDFQGRSTGEAFVQFASQDIAEKALKKHKERIGHRYIEIFKS 182
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 94/202 (46%), Gaps = 7/202 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
QFF IVP I L D GRS+GEA V+F+S D A++AL++HK +G RYIE++
Sbjct: 125 QFFAGLEIVPNGITLPVDFQGRSTGEAFVQFASQDIAEKALKKHKERIGHRYIEIFKSSR 184
Query: 80 TSSKEANGRGTGGFGGVKSTPY---GVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
+ G + +PY G G S R +R + + S
Sbjct: 185 AEVRTHYEPQRKVMGMQRPSPYDRPGGGRGYNSMGRGVSFERMRRGGYGGDGRYGDSGSS 244
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
+ C+ ++GLPY + D+ F L V + I D GR TG A ++F E+
Sbjct: 245 FQSTTGHCVHMRGLPYRATETDIYNFFSPLNPVRVHLEIGPD--GRVTGEADVEFATHED 302
Query: 197 AEKALLRHKEKIGHRLVTLVMS 218
A A+ + K + HR V L ++
Sbjct: 303 AVAAMSKDKANMQHRYVELFLN 324
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYA--GRCTGVAYIQFVDKENAEKALL 202
+R++GLP+ C ++V++F +I NG +I Y GR +G A+++F +E+ + A+
Sbjct: 9 VRVRGLPWSCSVDEVQRFFSECKIASNGTSIHFTYTREGRPSGEAFVEFESEEDLKSAVK 68
Query: 203 RHKEKIGHRLVTLVMSGA---QWFL 224
+ +E +GHR V + S + W L
Sbjct: 69 KDRETMGHRYVEVFKSNSVEMDWVL 93
>gi|395736587|ref|XP_003780726.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein H [Pongo abelii]
Length = 430
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S D+ + AL++ + MG RY+E
Sbjct: 44 IRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVE------------------ 85
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
GF ++ EMDW LK G +A D +RL+GLP
Sbjct: 86 GF------------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 120
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 121 FGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 180
Query: 212 LVTLVMS 218
+ + S
Sbjct: 181 YIEIFKS 187
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 308 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLNSTAG 367
Query: 80 TSSKEANGRGTGGFGGVKSTPYG 102
S + GG G + YG
Sbjct: 368 ASGGAYGSQMMGGMGLSNQSSYG 390
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 130 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 185
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 291 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 348
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 349 DKANMQHRYVELFLN 363
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
++++GLP+ C ++V++F +I GI + GR +G A+++ ++ + AL
Sbjct: 13 VVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLAL 72
Query: 202 LRHKEKIGHRLV 213
+ +E +GHR V
Sbjct: 73 KKDRETMGHRYV 84
>gi|410914042|ref|XP_003970497.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like [Takifugu
rubripes]
Length = 406
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 94/179 (52%), Gaps = 43/179 (24%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S +D + A+++ + MG RY+E++
Sbjct: 46 GRPSGEAFVEMESEEDLKVAVKKDRETMGHRYVEVF------------------------ 81
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ EMDW +K G G+A D +RL+GLP+ C KE++
Sbjct: 82 ------------------KSNNVEMDWVMKHTGPNCPGTAGD-GLIRLRGLPFGCSKEEI 122
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+F GLEIVPNGIT+P D GR TG A++QF ++ AEKAL +HKE+IGHR + + S
Sbjct: 123 VQFFSGLEIVPNGITLPVDIQGRSTGEAFVQFASQDIAEKALKKHKERIGHRYIEIFKS 181
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
QFF IVP I L D GRS+GEA V+F+S D A++AL++HK +G RYIE++
Sbjct: 124 QFFSGLEIVPNGITLPVDIQGRSTGEAFVQFASQDIAEKALKKHKERIGHRYIEIFKSSR 183
Query: 80 TSSKEANGRGTGGFGGVKSTPY-----GVGIFCISQFLAKWMRRAKRSEMDWALKRQGAV 134
+ G + PY G G + + R +R
Sbjct: 184 AEVRTHYEPQRKPMGMQRPGPYDRPSGGRGYNMMGR--GGSYDRMRRGGYGGGYSDGRYG 241
Query: 135 LSGSAVDQC---CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQF 191
GS+ C+ ++GLPY + D+ F L V I + D GR TG A ++F
Sbjct: 242 DGGSSFQSTTGHCVHMRGLPYRATETDIYNFFSPLNPVRVHIEVGPD--GRVTGEADVEF 299
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMS 218
E+A A+ + K + HR V L ++
Sbjct: 300 ATHEDAVAAMSKDKANMQHRYVELFLN 326
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 271 NFFSPLNPVRVHIEVGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLNSTAG 330
Query: 80 TSSKEANGRGTGGFGGVKS 98
S+ + GG G S
Sbjct: 331 GSNGSYGSQMMGGMGNQSS 349
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYA--GRCTGVAYIQFVDKEN 196
A + +R++GLP+ C ++V++F G +I+ NG I Y GR +G A+++ +E+
Sbjct: 2 ADEGYVVRIRGLPWSCSVDEVQRFFSGCKIINNGGAIHFTYTREGRPSGEAFVEMESEED 61
Query: 197 AEKALLRHKEKIGHRLVTLVMS 218
+ A+ + +E +GHR V + S
Sbjct: 62 LKVAVKKDRETMGHRYVEVFKS 83
>gi|355705000|gb|EHH30925.1| Heterogeneous nuclear ribonucleoprotein H2 [Macaca mulatta]
Length = 449
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S ++ + AL++ + MG RY+E++
Sbjct: 43 IRFIYTREGRPSGEAFVELESEEEVKLALKKDRETMGHRYVEVF---------------- 86
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 87 --------------------------KSNSVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 119
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNG+T+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 120 FGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 179
Query: 212 LVTLVMS 218
+ + S
Sbjct: 180 YIEIFKS 186
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ P+ + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 307 NFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELFLNSTAG 366
Query: 80 TS 81
TS
Sbjct: 367 TS 368
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP + L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L + I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPD--GRVTGEADVEFATHEDAVAAMAK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQF 191
+LS + +++ LP+ C ++V +F +I +GI + GR +G A+++
Sbjct: 2 MLSTEGREGFVVKVSALPWSCSADEVMRFFSDRKIQNGTSGIRFIYTREGRPSGEAFVEL 61
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA---QWFL------SPPLTNE 231
+E + AL + +E +GHR V + S + W L SP N+
Sbjct: 62 ESEEEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHTGPNSPDTAND 110
>gi|45387779|ref|NP_991247.1| heterogeneous nuclear ribonucleoprotein H1 [Danio rerio]
gi|41107558|gb|AAH65439.1| Heterogeneous nuclear ribonucleoprotein H1 [Danio rerio]
Length = 403
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 94/179 (52%), Gaps = 43/179 (24%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VEF S +D + A+++ + MG RY+E++
Sbjct: 47 GRPSGEAFVEFESEEDLKIAVKKDRETMGHRYVEVF------------------------ 82
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ EMDW LK G + D +RL+GLP+ C KE++
Sbjct: 83 ------------------KSNSVEMDWVLKHTGPNCPETGGD-GLVRLRGLPFGCSKEEI 123
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+F GLEIVPNGIT+P D+ GR TG A++QF ++ AEKAL +HKE+IGHR + + S
Sbjct: 124 VQFFAGLEIVPNGITLPVDFQGRSTGEAFVQFASQDIAEKALKKHKERIGHRYIEIFKS 182
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 94/202 (46%), Gaps = 7/202 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
QFF IVP I L D GRS+GEA V+F+S D A++AL++HK +G RYIE++
Sbjct: 125 QFFAGLEIVPNGITLPVDFQGRSTGEAFVQFASQDIAEKALKKHKERIGHRYIEIFKSSR 184
Query: 80 TSSKEANGRGTGGFGGVKSTPY---GVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
+ G + +PY G G S R +R + + S
Sbjct: 185 AEVRTHYEPQRKVMGMQRPSPYDRPGGGRGYNSMGRGVSFERMRRGGYGGDGRYGDSGSS 244
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
+ C+ ++GLPY + D+ F L V + I D GR TG A ++F E+
Sbjct: 245 FQSTTGHCVHMRGLPYRATETDIYNFFSPLNPVRVHLEIGPD--GRVTGEADVEFATHED 302
Query: 197 AEKALLRHKEKIGHRLVTLVMS 218
A A+ + K + HR V L ++
Sbjct: 303 AVAAMSKDKANMQHRYVELFLN 324
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYA--GRCTGVAYIQFVDKENAEKALL 202
+R++GLP+ C ++V++F +I NG +I Y GR +G A+++F +E+ + A+
Sbjct: 9 VRVRGLPWSCSVDEVQRFFSECKIASNGTSIHFTYTREGRPSGEAFVEFESEEDLKIAVK 68
Query: 203 RHKEKIGHRLVTLVMSGA---QWFL 224
+ +E +GHR V + S + W L
Sbjct: 69 KDRETMGHRYVEVFKSNSVEMDWVL 93
>gi|291190682|ref|NP_001167168.1| Heterogeneous nuclear ribonucleoprotein H [Salmo salar]
gi|223648432|gb|ACN10974.1| Heterogeneous nuclear ribonucleoprotein H [Salmo salar]
Length = 396
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 96/189 (50%), Gaps = 43/189 (22%)
Query: 30 VNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRG 89
+I + GR SGEA VE + DD + A+++ + MG RY+E++
Sbjct: 37 TSIHFTSTREGRPSGEAFVELENEDDLKIAVKKDRETMGHRYVEVF-------------- 82
Query: 90 TGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQG 149
++ EMDW +K G S +RL+G
Sbjct: 83 ----------------------------KSNNVEMDWVMKHSGPN-SPETTGDGLVRLRG 113
Query: 150 LPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIG 209
LP+ C KE++ +FL GLEIVPNGIT+P D+ GR TG A++QF ++ AEKAL +HKE+IG
Sbjct: 114 LPFGCSKEEIVQFLSGLEIVPNGITLPLDFQGRSTGEAFVQFASQDIAEKALKKHKERIG 173
Query: 210 HRLVTLVMS 218
HR + + S
Sbjct: 174 HRYIEIFKS 182
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 34/212 (16%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE-------- 78
IVP I L D GRS+GEA V+F+S D A++AL++HK +G RYIE++
Sbjct: 132 IVPNGITLPLDFQGRSTGEAFVQFASQDIAEKALKKHKERIGHRYIEIFKSSRAEVRTHY 191
Query: 79 ------------GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDW 126
G + + GRG GG Y R S
Sbjct: 192 EPQRKPMGMQRPGPYDRPSGGRGYNMMGGRGGGSYDRARRGGYGGGVSDGRYGDSSS--- 248
Query: 127 ALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGV 186
S + C+ ++GLPY + D+ F L V + I D GR TG
Sbjct: 249 ---------SFQSTTGHCVHMRGLPYRATETDIYNFFSPLNPVRVHVEIGPD--GRVTGE 297
Query: 187 AYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
A ++F E+A A+ + K + HR V L ++
Sbjct: 298 ADVEFATHEDAVAAMSKDKANMQHRYVELFLN 329
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 274 NFFSPLNPVRVHVEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFL 328
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITI--PHDYAGRCTGVAYIQFVDKENAEKAL 201
+R++GLP+ C ++V +F +I NG +I GR +G A+++ ++++ + A+
Sbjct: 8 VVRVRGLPWSCSVDEVRRFFSDCKIANNGTSIHFTSTREGRPSGEAFVELENEDDLKIAV 67
Query: 202 LRHKEKIGHRLVTLVMSGA---QWFL--SPPLTNET 232
+ +E +GHR V + S W + S P + ET
Sbjct: 68 KKDRETMGHRYVEVFKSNNVEMDWVMKHSGPNSPET 103
>gi|9624998|ref|NP_062543.1| heterogeneous nuclear ribonucleoprotein H2 [Homo sapiens]
gi|74099697|ref|NP_001027565.1| heterogeneous nuclear ribonucleoprotein H2 [Homo sapiens]
gi|197100479|ref|NP_001125156.1| heterogeneous nuclear ribonucleoprotein H2 [Pongo abelii]
gi|302565696|ref|NP_001180922.1| heterogeneous nuclear ribonucleoprotein H2 [Macaca mulatta]
gi|350536397|ref|NP_001233423.1| heterogeneous nuclear ribonucleoprotein H2 [Pan troglodytes]
gi|109131568|ref|XP_001094080.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform 3
[Macaca mulatta]
gi|296236002|ref|XP_002763136.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform 2
[Callithrix jacchus]
gi|332254772|ref|XP_003276506.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 [Nomascus
leucogenys]
gi|390480025|ref|XP_003735831.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 [Callithrix
jacchus]
gi|403298789|ref|XP_003940188.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform 1
[Saimiri boliviensis boliviensis]
gi|403298791|ref|XP_003940189.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform 2
[Saimiri boliviensis boliviensis]
gi|426396685|ref|XP_004064561.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform 1
[Gorilla gorilla gorilla]
gi|426396687|ref|XP_004064562.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform 2
[Gorilla gorilla gorilla]
gi|426396689|ref|XP_004064563.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform 3
[Gorilla gorilla gorilla]
gi|2500576|sp|P55795.1|HNRH2_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein H2;
Short=hnRNP H2; AltName: Full=FTP-3; AltName:
Full=Heterogeneous nuclear ribonucleoprotein H';
Short=hnRNP H'
gi|75070864|sp|Q5RD26.1|HNRH2_PONAB RecName: Full=Heterogeneous nuclear ribonucleoprotein H2;
Short=hnRNP H2; AltName: Full=Heterogeneous nuclear
ribonucleoprotein H'; Short=hnRNP H'
gi|1684915|gb|AAB64202.1| FTP3 [Homo sapiens]
gi|55727150|emb|CAH90331.1| hypothetical protein [Pongo abelii]
gi|119623269|gb|EAX02864.1| heterogeneous nuclear ribonucleoprotein H2 (H') [Homo sapiens]
gi|120660030|gb|AAI30346.1| Heterogeneous nuclear ribonucleoprotein H2 (H') [Homo sapiens]
gi|120660336|gb|AAI30344.1| Heterogeneous nuclear ribonucleoprotein H2 (H') [Homo sapiens]
gi|168277748|dbj|BAG10852.1| heterogeneous nuclear ribonucleoprotein H' [synthetic construct]
gi|313883006|gb|ADR82989.1| heterogeneous nuclear ribonucleoprotein H2 (H') (HNRNPH2),
transcript variant 2 [synthetic construct]
gi|313883348|gb|ADR83160.1| heterogeneous nuclear ribonucleoprotein H2 (H') (HNRNPH2),
transcript variant 2 [synthetic construct]
gi|343958876|dbj|BAK63293.1| heterogeneous nuclear ribonucleoprotein H' [Pan troglodytes]
gi|380812318|gb|AFE78033.1| heterogeneous nuclear ribonucleoprotein H2 [Macaca mulatta]
gi|384946774|gb|AFI36992.1| heterogeneous nuclear ribonucleoprotein H2 [Macaca mulatta]
gi|410264162|gb|JAA20047.1| RPL36A-HNRNPH2 readthrough [Pan troglodytes]
gi|410303792|gb|JAA30496.1| heterogeneous nuclear ribonucleoprotein H2 (H') [Pan troglodytes]
gi|410303794|gb|JAA30497.1| heterogeneous nuclear ribonucleoprotein H2 (H') [Pan troglodytes]
gi|410355365|gb|JAA44286.1| heterogeneous nuclear ribonucleoprotein H2 (H') [Pan troglodytes]
gi|410355367|gb|JAA44287.1| heterogeneous nuclear ribonucleoprotein H2 (H') [Pan troglodytes]
Length = 449
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S ++ + AL++ + MG RY+E++
Sbjct: 43 IRFIYTREGRPSGEAFVELESEEEVKLALKKDRETMGHRYVEVF---------------- 86
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 87 --------------------------KSNSVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 119
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNG+T+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 120 FGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 179
Query: 212 LVTLVMS 218
+ + S
Sbjct: 180 YIEIFKS 186
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ P+ + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 307 NFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELFLNSTAG 366
Query: 80 TS 81
TS
Sbjct: 367 TS 368
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP + L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L + I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPD--GRVTGEADVEFATHEDAVAAMAK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQF 191
+LS + ++++GLP+ C ++V +F +I +GI + GR +G A+++
Sbjct: 2 MLSTEGREGFVVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVEL 61
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA---QWFL------SPPLTNE 231
+E + AL + +E +GHR V + S + W L SP N+
Sbjct: 62 ESEEEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHTGPNSPDTAND 110
>gi|47086853|ref|NP_997754.1| heterogeneous nuclear ribonucleoprotein H1, like [Danio rerio]
gi|28278402|gb|AAH44161.1| Zgc:85960 [Danio rerio]
gi|182891430|gb|AAI64507.1| Zgc:85960 protein [Danio rerio]
Length = 407
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 94/179 (52%), Gaps = 43/179 (24%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S DD + A+++ + +MG RY+E++
Sbjct: 47 GRPSGEAFVELESEDDLKIAVKKDRESMGHRYVEVF------------------------ 82
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ EMDW LK G + D +RL+GLP+ C KE++
Sbjct: 83 ------------------KSNNVEMDWVLKHTGPNCPETEGD-GLVRLRGLPFGCSKEEI 123
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+F GLEIVPNGIT+P D+ GR TG A++QF ++ AEKAL +HKE+IGHR + + S
Sbjct: 124 VQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQDIAEKALKKHKERIGHRYIEIFKS 182
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 95/205 (46%), Gaps = 10/205 (4%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
QFF IVP I L D GRS+GEA V+F+S D A++AL++HK +G RYIE++
Sbjct: 125 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQDIAEKALKKHKERIGHRYIEIFKSSR 184
Query: 80 TSSKEANGRGTGGFGGVKSTPY------GVGIFCISQFLAKWMRRAKRSEMDWALKRQGA 133
+ G G + PY G G +S+ + R + R G
Sbjct: 185 AEVRTHYEPPRKGMGMQRPGPYDRPSGGGRGYNGMSRGGSFDRMRRGGYGGGVSDGRYGD 244
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVD 193
+ + C+ ++GLPY + D+ F L V I I D GR TG A ++F
Sbjct: 245 GGNFQSTTGHCVHMRGLPYRATEPDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFAT 302
Query: 194 KENAEKALLRHKEKIGHRLVTLVMS 218
E+A A+ K + HR V L ++
Sbjct: 303 HEDAVAAMSNDKANMQHRYVELFLN 327
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYA--GRCTGVAYIQFVDKENAEKALL 202
+R++GLP+ C E+V +F G +I NG I Y GR +G A+++ +++ + A+
Sbjct: 9 VRVRGLPWSCSAEEVSRFFSGCKISSNGSAIHFTYTREGRPSGEAFVELESEDDLKIAVK 68
Query: 203 RHKEKIGHRLVTLVMS 218
+ +E +GHR V + S
Sbjct: 69 KDRESMGHRYVEVFKS 84
>gi|60098931|emb|CAH65296.1| hypothetical protein RCJMB04_15n19 [Gallus gallus]
Length = 499
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 95/189 (50%), Gaps = 43/189 (22%)
Query: 30 VNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRG 89
+ I + GR SGEA E S +D + AL++ + MG RY+ ++
Sbjct: 71 LGIRFIYTREGRPSGEAFAELESEEDVKLALKKDRETMGHRYVVVF-------------- 116
Query: 90 TGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQG 149
++ EMDW LK G +A D +RL+G
Sbjct: 117 ----------------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRG 147
Query: 150 LPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIG 209
LP+ C KE++ +F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IG
Sbjct: 148 LPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIG 207
Query: 210 HRLVTLVMS 218
HR + + S
Sbjct: 208 HRYIEIFKS 216
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 337 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFL 391
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 159 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 214
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYA--GRCTGVAYIQF 191
+L+ + + ++++GLP+ C E+V++F +I+ + I Y GR +G A+ +
Sbjct: 32 MLNTESSEGYVVKVRGLPWSCSTEEVQRFFSDCKILNGALGIRFIYTREGRPSGEAFAEL 91
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMS 218
+E+ + AL + +E +GHR V + S
Sbjct: 92 ESEEDVKLALKKDRETMGHRYVVVFKS 118
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 320 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 377
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 378 DKANMQHRYVELFLN 392
>gi|126328016|ref|XP_001371380.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like
[Monodelphis domestica]
Length = 468
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 102/213 (47%), Gaps = 50/213 (23%)
Query: 22 QFFKPIVPVN----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
QFF N I + GR SGEA VE S D+ AL++ + MG RY+E++
Sbjct: 29 QFFSECKIQNGAAGIHFIYTREGRPSGEAFVELESEDEVTLALKKDRETMGHRYVEVF-- 86
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ EMDW LK
Sbjct: 87 ----------------------------------------KSNNIEMDWVLKHTAPNSLD 106
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENA 197
+A D +RL+GLP+ C KE++ +F GLEI+PNGIT+P D+ GR +G A++QF +E A
Sbjct: 107 TASD-GFVRLRGLPFRCNKEEIVQFFSGLEIMPNGITLPVDFQGRNSGEAFVQFASQEIA 165
Query: 198 EKALLRHKEKIGHRLVTLVMSG---AQWFLSPP 227
EKAL +HKE+IGHR + + S AQ PP
Sbjct: 166 EKALKKHKERIGHRYIEIFKSSQAEAQTHYDPP 198
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 106/238 (44%), Gaps = 50/238 (21%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE- 78
QFF I+P I L D GR+SGEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIMPNGITLPVDFQGRNSGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSQ 188
Query: 79 -------------------GTSSKEANGRGTG------GFGGVKSTPYGVGI-------- 105
G + GRG GF G++ Y G
Sbjct: 189 AEAQTHYDPPRKLMAKQRPGPYDRPQAGRGYSTLGRGVGFAGMRCGAYEAGYRGYDDYNW 248
Query: 106 ----FCISQFLAKWMRRAKRSEMD-WALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVE 160
+C ++L ++ + S D W+ Q +G V ++GLPY+ + D+
Sbjct: 249 YNDDYCFGRYLNYYLAMSGHSYGDSWSTFHQSP--AGHYV-----HMRGLPYKATENDIC 301
Query: 161 KFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
F L+ V I I D GR TG A ++F E+A A+ + K + HR + L ++
Sbjct: 302 DFFSPLKPVGAYIEIGSD--GRVTGEADVEFATHEDAVAAMSKDKANMQHRYIELFLN 357
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF P+ PV + GR +GEADVEF++ +DA A+ + K+NM RYIEL++ T +
Sbjct: 303 FFSPLKPVGAYIEIGSDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYIELFLNSTTEA 362
Query: 83 KEA 85
+
Sbjct: 363 DSS 365
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 60/140 (42%), Gaps = 8/140 (5%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQF 191
+LS + ++++GLP+ C D+++F +I GI + GR +G A+++
Sbjct: 2 MLSTKGEEGFVVKVRGLPWSCSASDIQQFFSECKIQNGAAGIHFIYTREGRPSGEAFVEL 61
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA---QWFL---SPPLTNETPISRLDLTGSPVR 245
++ AL + +E +GHR V + S W L +P + + L G P R
Sbjct: 62 ESEDEVTLALKKDRETMGHRYVEVFKSNNIEMDWVLKHTAPNSLDTASDGFVRLRGLPFR 121
Query: 246 STICVLCHPLTPRSVRPRSV 265
+ + + P +
Sbjct: 122 CNKEEIVQFFSGLEIMPNGI 141
>gi|384946772|gb|AFI36991.1| heterogeneous nuclear ribonucleoprotein H2 [Macaca mulatta]
Length = 449
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S ++ + AL++ + MG RY+E++
Sbjct: 43 IRFIYTREGRPSGEAFVELESEEEVKLALKKDRETMGHRYVEVF---------------- 86
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 87 --------------------------KSNSVEMDWVLKHTGPNSPDTANDGF-VRLRGLP 119
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNG+T+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 120 FGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 179
Query: 212 LVTLVMS 218
+ + S
Sbjct: 180 YIEIFKS 186
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ P+ + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 307 NFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELFLNSTAG 366
Query: 80 TS 81
TS
Sbjct: 367 TS 368
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L + I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPD--GRVTGEADVEFATHEDAVAAMAK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQF 191
+LS + ++++GLP+ C ++V +F +I +GI + GR +G A+++
Sbjct: 2 MLSTEGREGFVVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVEL 61
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA---QWFL------SPPLTNE 231
+E + AL + +E +GHR V + S + W L SP N+
Sbjct: 62 ESEEEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHTGPNSPDTAND 110
>gi|397478241|ref|XP_003810461.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 [Pan
paniscus]
Length = 314
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 95/187 (50%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S ++ + AL++ + MG RY+E++
Sbjct: 43 IRFIYTREGRPSGEAFVELESEEEVKLALKKDRETMGHRYVEVF---------------- 86
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 87 --------------------------KSNSVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 119
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNG+T+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 120 FGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 179
Query: 212 LVTLVMS 218
+ S
Sbjct: 180 YTEIFKS 186
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP + L D GRS+GEA V+F+S + A++AL++HK +G RY E++
Sbjct: 129 QFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYTEIF 184
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQF 191
+LS + ++++GLP+ C ++V +F +I +GI + GR +G A+++
Sbjct: 2 MLSTEGREGFVVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVEL 61
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA---QWFL------SPPLTNE 231
+E + AL + +E +GHR V + S + W L SP N+
Sbjct: 62 ESEEEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHTGPNSPDTAND 110
>gi|47222987|emb|CAF99143.1| unnamed protein product [Tetraodon nigroviridis]
Length = 388
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 91/172 (52%), Gaps = 43/172 (25%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE + DD + A+++ + MG RY+E++
Sbjct: 46 GRPSGEAFVEMETEDDLKVAVKKDRETMGHRYVEVF------------------------ 81
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ EMDW +K G G+A D +RL+GLP+ C KE++
Sbjct: 82 ------------------KSNNVEMDWVMKHTGPNCPGTAGDGL-IRLRGLPFGCSKEEI 122
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+F GLEIVPNGIT+P D GR TG A++QF ++ AEKAL +HKE+IGHR
Sbjct: 123 VQFFSGLEIVPNGITLPVDIQGRSTGEAFVQFASQDIAEKALKKHKERIGHR 174
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 285 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLNSTAG 344
Query: 80 TSSKEANGRGTGGFG 94
S+ + GG G
Sbjct: 345 GSNGSYGSQMMGGMG 359
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYA--GRCTGVAYIQFVDKENAEKALL 202
+R++GLP+ C ++V++F G +I+ NG I Y GR +G A+++ +++ + A+
Sbjct: 8 VRIRGLPWSCSVDEVQRFFSGCKILNNGSGIHFTYTREGRPSGEAFVEMETEDDLKVAVK 67
Query: 203 RHKEKIGHRLVTLVMS 218
+ +E +GHR V + S
Sbjct: 68 KDRETMGHRYVEVFKS 83
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRY 71
QFF IVP I L D GRS+GEA V+F+S D A++AL++HK +G R+
Sbjct: 124 QFFSGLEIVPNGITLPVDIQGRSTGEAFVQFASQDIAEKALKKHKERIGHRW 175
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 268 CVHMRGLPYRATETDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 325
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 326 DKANMQHRYVELFLN 340
>gi|355694919|gb|AER99830.1| heteroproteinous nuclear ribonucleoprotein F [Mustela putorius
furo]
Length = 342
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 97/186 (52%), Gaps = 46/186 (24%)
Query: 46 ADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKSTPYGVGI 105
A VE S DD + AL++ + +MG RYIE++
Sbjct: 1 AFVELESEDDVKMALKKDRESMGHRYIEVF------------------------------ 30
Query: 106 FCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEG 165
++ R+EMDW LK G + +A D +RL+GLP+ C KE++ +F G
Sbjct: 31 ------------KSHRTEMDWVLKHSGPNSADTAND-GFVRLRGLPFGCTKEEIVQFFSG 77
Query: 166 LEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGAQW--- 222
LEIVPNGIT+P D G+ TG A++QF +E AEKAL +HKE+IGHR + + S +
Sbjct: 78 LEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVRS 137
Query: 223 FLSPPL 228
+ PPL
Sbjct: 138 YSDPPL 143
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 103/242 (42%), Gaps = 53/242 (21%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY---M 76
QFF IVP I L D G+ +GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 73 QFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQ 132
Query: 77 EE-----------------------GTSS------KEA------NGRGTGGFGGVK---- 97
EE GT+ K+A +G + G+GG +
Sbjct: 133 EEVRSYSDPPLKFMSVQRPGPYDRPGTARRYIGIVKQAGLERMRSGAYSAGYGGYEEYSG 192
Query: 98 -STPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKK 156
S YG + L+ + S M G S C + ++GLPY+ +
Sbjct: 193 LSDGYGFTTDLFGRDLSYCL-----SGMYDHRYGDGEFTVQSTTGHC-VHMRGLPYKATE 246
Query: 157 EDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLV 216
D+ F L V I I D GR TG A ++F E A A+ + + + HR + L
Sbjct: 247 NDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELF 304
Query: 217 MS 218
++
Sbjct: 305 LN 306
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++ T
Sbjct: 251 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTG 310
Query: 82 SKEANG 87
+ +NG
Sbjct: 311 A--SNG 314
>gi|355757549|gb|EHH61074.1| Heterogeneous nuclear ribonucleoprotein H2 [Macaca fascicularis]
Length = 449
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 93/179 (51%), Gaps = 43/179 (24%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S ++ + AL++ + MG RY+E++
Sbjct: 51 GRPSGEAFVELESEEEVKLALKKDRETMGHRYVEVF------------------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ EMDW LK G +A D +RL+GLP+ C E++
Sbjct: 87 ------------------KSNSVEMDWVLKHTGPNSPDTAND-GFVRLRGLPFGCSNEEI 127
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+F GLEIVPNG+T+P D+ GR TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 128 VQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKS 186
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ P+ + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 307 NFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELFLNSTAG 366
Query: 80 TS 81
TS
Sbjct: 367 TS 368
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP + L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L + I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPD--GRVTGEADVEFATHEDAVAAMAK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQF 191
+LS + ++++GLP+ C ++V +F +I +GI + GR +G A+++
Sbjct: 2 MLSTEGREGFVVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVEL 61
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA---QWFL------SPPLTNE 231
+E + AL + +E +GHR V + S + W L SP N+
Sbjct: 62 ESEEEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHTGPNSPDTAND 110
>gi|348516774|ref|XP_003445912.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like
[Oreochromis niloticus]
Length = 406
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 94/179 (52%), Gaps = 43/179 (24%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VEF + +D + A+++ + MG RY+E++
Sbjct: 46 GRPSGEAFVEFETEEDLKIAVKKDRETMGHRYVEVF------------------------ 81
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ EMDW +K G +A D +RL+GLP+ C KE++
Sbjct: 82 ------------------KSNNVEMDWVMKHTGPNCPETAGD-GLVRLRGLPFGCSKEEI 122
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+F GLEIVPNGIT+P D GR TG A++QF ++ AEKAL +HKE+IGHR + + S
Sbjct: 123 VQFFSGLEIVPNGITLPVDIQGRSTGEAFVQFASQDIAEKALKKHKERIGHRYIEIFKS 181
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 95/207 (45%), Gaps = 14/207 (6%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
QFF IVP I L D GRS+GEA V+F+S D A++AL++HK +G RYIE++
Sbjct: 124 QFFSGLEIVPNGITLPVDIQGRSTGEAFVQFASQDIAEKALKKHKERIGHRYIEIFKSSR 183
Query: 80 TSSKEANGRGTGGFGGVKSTPY-----GVGIFCISQFLAKWMRRAKRSEMDWALKRQGAV 134
+ G + PY G G + + + R + R G
Sbjct: 184 AEVRTHYEPQRKPMGMQRPGPYDRPSGGRGYNMMGRGGSYDRMRRGGYGGGVSDGRYGD- 242
Query: 135 LSGSAVDQC---CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQF 191
GS+ C+ ++GLPY + D+ F L V I I D GR TG A ++F
Sbjct: 243 -GGSSFQSTTGHCVHMRGLPYRATETDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEF 299
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMS 218
E+A A+ + K + HR V L ++
Sbjct: 300 ATHEDAVAAMSKDKANMQHRYVELFLN 326
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 271 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLNSTAG 330
Query: 80 TSSKEANGRGTGGFGGVKS 98
S+ + + GG G S
Sbjct: 331 GSNGAYSSQMMGGMGSQSS 349
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYA--GRCTGVAYIQFVDKEN 196
A + +R++GLP+ C ++V++F +I+ NG I Y GR +G A+++F +E+
Sbjct: 2 ADEGYVVRIRGLPWSCSVDEVQRFFSDCKILNNGSGIHFTYTREGRPSGEAFVEFETEED 61
Query: 197 AEKALLRHKEKIGHRLVTLVMS 218
+ A+ + +E +GHR V + S
Sbjct: 62 LKIAVKKDRETMGHRYVEVFKS 83
>gi|196010820|ref|XP_002115274.1| hypothetical protein TRIADDRAFT_29141 [Trichoplax adhaerens]
gi|190582045|gb|EDV22119.1| hypothetical protein TRIADDRAFT_29141 [Trichoplax adhaerens]
Length = 339
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 96/177 (54%), Gaps = 46/177 (25%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR+SGEA +EF S++D RAL+R++ +MG RY+E++
Sbjct: 47 GRASGEAYIEFGSLEDFNRALERNRCHMGKRYVEVF------------------------ 82
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD-QCCMRLQGLPYECKKED 158
++KRSEMD+ +KR S D + +RL+GLPYEC KE+
Sbjct: 83 ------------------KSKRSEMDYVVKR---TKQRSGRDSENVVRLRGLPYECSKEE 121
Query: 159 VEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTL 215
+ +F G EI+PNGIT D GR TG AY++F + + +E+AL + KE IGHR + +
Sbjct: 122 IAQFFTGYEIIPNGITFGVDRDGRSTGEAYVEFANTDVSERALSKDKETIGHRYIEI 178
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 95/218 (43%), Gaps = 28/218 (12%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
+QFF I+P I D GRS+GEA VEF++ D ++RAL + K +G RYIE++ +
Sbjct: 123 AQFFTGYEIIPNGITFGVDRDGRSTGEAYVEFANTDVSERALSKDKETIGHRYIEIFRAK 182
Query: 79 GTSSKEANGRG----TGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAV 134
+ + G + PY + ++ R +
Sbjct: 183 KSDIHNMSAPKIRPLIGSAASSRPRPYD------RKRGDRFTRGHPEDRYNQGRGYNRGY 236
Query: 135 LSGSAVDQ--------------CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYA 180
L D +R++GLP++ + ++ F + +I I I +
Sbjct: 237 LDNRPSDHPVEPDRPPDFEPNVHSIRMRGLPFKVTENEIVDFFD--QIPLQNIHIEYGDG 294
Query: 181 GRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
G+ TG A ++F + E+A +A+ + + +I HR + L ++
Sbjct: 295 GKATGEAVVEFYNYEDALEAMNKDRRRIKHRYIELFLN 332
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVP--NGITIPHDYAGRCTGVAYIQFVDKE 195
+ ++ +R++GLP+ EDV+KF G + GI + GR +G AYI+F E
Sbjct: 2 ANTEEFVVRIRGLPWSATVEDVQKFFTGCRVKEGRQGIHFTYASDGRASGEAYIEFGSLE 61
Query: 196 NAEKALLRHKEKIGHRLVTLVMS 218
+ +AL R++ +G R V + S
Sbjct: 62 DFNRALERNRCHMGKRYVEVFKS 84
>gi|351714741|gb|EHB17660.1| Heterogeneous nuclear ribonucleoprotein F [Heterocephalus glaber]
Length = 396
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 98/192 (51%), Gaps = 46/192 (23%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S +D + AL++ + +MG RYIE++
Sbjct: 50 GRQSGEAFVELESEEDVKTALKKDRESMGHRYIEVF------------------------ 85
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ ++EMDW LK + +A D +RL GL + C K ++
Sbjct: 86 ------------------KSHKTEMDWVLKHSSPNSTDTAND-SFVRLWGLSFGCTKGEI 126
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+F GLEIVPNGIT+P D G+ TG A++QF +E AEKAL +HKEKIGHR + + S
Sbjct: 127 VQFFSGLEIVPNGITLPVDPEGKFTGKAFLQFASQELAEKALRKHKEKIGHRYIEVFKSS 186
Query: 220 AQ---WFLSPPL 228
+ + PPL
Sbjct: 187 QEVVRSYSDPPL 198
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 102/248 (41%), Gaps = 63/248 (25%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMG----------- 68
QFF IVP I L D G+ +G+A ++F+S + A++AL++HK +G
Sbjct: 128 QFFSGLEIVPNGITLPVDPEGKFTGKAFLQFASQELAEKALRKHKEKIGHRYIEVFKSSQ 187
Query: 69 ----------------------------DRYIELYMEEG-----TSSKEANGRGTGGFGG 95
RYI + + G + + A RG + G
Sbjct: 188 EVVRSYSDPPLKFMSVQQPGPYDRPGTAQRYIGIVKQAGLERMPSGAYSAGYRGYEEYSG 247
Query: 96 VKSTPYGVGIFCISQFLA---KWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPY 152
+ S YG I + L+ M + + ++ ++ + C+ ++GLPY
Sbjct: 248 L-SDDYGFTTDLIGRDLSYCLSGMYDHRYGDSEFTVQ---------STTGHCVHMRGLPY 297
Query: 153 ECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEK--IGH 210
+ + D+ F L V I I + GR TG A ++F E A A+ + K++ I H
Sbjct: 298 KATENDIYNFFSPLNAVRVHIEIRPN--GRVTGEADVEFATNEEAMAAMSKDKDRTNIQH 355
Query: 211 RLVTLVMS 218
R + L ++
Sbjct: 356 RYIELFLN 363
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
++L+GLP+ C EDV+ FL I G+ + GR +G A+++ +E+ + AL
Sbjct: 11 VVKLRGLPWSCSTEDVQNFLSDCTIRDGVAGVHFIYTREGRQSGEAFVELESEEDVKTAL 70
Query: 202 LRHKEKIGHRLVTLVMSGA---QWFLSPPLTNET 232
+ +E +GHR + + S W L N T
Sbjct: 71 KKDRESMGHRYIEVFKSHKTEMDWVLKHSSPNST 104
>gi|443701155|gb|ELT99751.1| hypothetical protein CAPTEDRAFT_226859 [Capitella teleta]
Length = 390
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 98/189 (51%), Gaps = 36/189 (19%)
Query: 33 LLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGG 92
L T D GR SGEA +E +S +D +AL++ K +MG RYIE
Sbjct: 51 LTYTKD-GRPSGEAYIELASEEDVAKALEKDKHHMGRRYIE------------------- 90
Query: 93 FGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPY 152
G++S+ Y + EM+W +KR G D +RL+GLP+
Sbjct: 91 --GMQSSLY-------------LIYNHVDLEMEWMVKRSGPNQVMGNND-AVIRLRGLPF 134
Query: 153 ECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRL 212
C KE+V F GLEIVPNGIT+ D GR TG A++QF ++ AE+A +HKEKIGHR
Sbjct: 135 GCSKEEVAHFFSGLEIVPNGITLMQDGQGRSTGDAFVQFASQDIAERAQQKHKEKIGHRY 194
Query: 213 VTLVMSGAQ 221
+ + S Q
Sbjct: 195 IEIFKSSLQ 203
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 20 CSQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
+ FF IVP I L+ D GRS+G+A V+F+S D A+RA Q+HK +G RYIE++
Sbjct: 141 VAHFFSGLEIVPNGITLMQDGQGRSTGDAFVQFASQDIAERAQQKHKEKIGHRYIEIF 198
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 40/56 (71%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+FFKP+ PVNI + G++SG+ADV+F++ +A A+ R + +M RYIEL+++
Sbjct: 288 EFFKPLAPVNIAIHYMPDGKASGQADVDFATHQEASEAMSRDRESMEHRYIELFLK 343
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 144 CMRLQGLPYECKKEDVEKFLEG-LEIVP--NGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+R++GLP+ ++V FLE + I+ +GI + + GR +G AYI+ +E+ KA
Sbjct: 17 IVRIRGLPWSASHDEVANFLEADVNIMGGRSGIHLTYTKDGRPSGEAYIELASEEDVAKA 76
Query: 201 LLRHKEKIGHRLVTLVMS 218
L + K +G R + + S
Sbjct: 77 LEKDKHHMGRRYIEGMQS 94
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+ ++GLP++ ++D+ +F + L P I I + G+ +G A + F + A +A+ R
Sbjct: 271 SVHMRGLPFQAAEDDIVEFFKPL--APVNIAIHYMPDGKASGQADVDFATHQEASEAMSR 328
Query: 204 HKEKIGHRLVTLVMSGAQ 221
+E + HR + L + ++
Sbjct: 329 DRESMEHRYIELFLKSSE 346
>gi|432879057|ref|XP_004073431.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like [Oryzias
latipes]
Length = 413
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 93/179 (51%), Gaps = 43/179 (24%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE + +D + A+++ + MG RY+E++
Sbjct: 46 GRPSGEAFVEMETEEDLKVAVKKDRETMGHRYVEVF------------------------ 81
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ EMDW +K G +A D +RL+GLP+ C KE++
Sbjct: 82 ------------------KSNNVEMDWVMKHTGPNCPETAGD-GLVRLRGLPFGCSKEEI 122
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+F GLEIVPNGIT+P D GR TG A++QF ++ AEKAL +HKE+IGHR + + S
Sbjct: 123 VQFFSGLEIVPNGITLPVDIQGRSTGEAFVQFASQDIAEKALKKHKERIGHRYIEIFKS 181
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 96/213 (45%), Gaps = 20/213 (9%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
QFF IVP I L D GRS+GEA V+F+S D A++AL++HK +G RYIE++
Sbjct: 124 QFFSGLEIVPNGITLPVDIQGRSTGEAFVQFASQDIAEKALKKHKERIGHRYIEIFKSCR 183
Query: 80 TSSKEANGRGTGGFGGVKSTPY-----GVGIFCISQFLAKWMRRAKRSEMDWALKRQGAV 134
+ G + +PY G G + + + R +R G V
Sbjct: 184 AEVRTHYEPQRKPMGMQRPSPYDRPSGGRGYNMMGRGAS--YDRMRRGGYGGGGGGGGGV 241
Query: 135 LSGSAVDQC---------CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTG 185
G D C+ ++GLPY + D+ F L V I I D GR TG
Sbjct: 242 SDGRYGDSGSSFQSTTGHCVHMRGLPYRATETDIYNFFSPLNPVRVHIEIGPD--GRVTG 299
Query: 186 VAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
A ++F E+A A+ + K + HR V L ++
Sbjct: 300 EADVEFATHEDAVAAMSKDKANMQHRYVELFLN 332
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 277 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLNSTAG 336
Query: 80 TSSKEANGRGTGGFGGVKS 98
S+ + GG G S
Sbjct: 337 GSNGAYGSQMMGGMGNQSS 355
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYA--GRCTGVAYIQFVDKEN 196
A + +R++GLP+ C ++V++F G +I+ NG I Y GR +G A+++ +E+
Sbjct: 2 ADEGYVVRIRGLPWSCSVDEVQRFFSGCKILNNGSGIHFTYTREGRPSGEAFVEMETEED 61
Query: 197 AEKALLRHKEKIGHRLVTLVMS 218
+ A+ + +E +GHR V + S
Sbjct: 62 LKVAVKKDRETMGHRYVEVFKS 83
>gi|291389582|ref|XP_002711385.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F [Oryctolagus
cuniculus]
Length = 415
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 94/179 (52%), Gaps = 43/179 (24%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S DD + AL++ + + G YI+++
Sbjct: 51 GRQSGEAFVELESEDDVKMALKKDRESTGHPYIKVF------------------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ R+E+DW LK G + +A D +RL+GLP+ C KE++
Sbjct: 87 ------------------KSHRTELDWVLKHSGPNSADTAND-GFVRLRGLPFGCTKEEI 127
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+F GLEIVPNGIT+P D + TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 128 VQFFSGLEIVPNGITLPVDSEDKITGEAFVQFASQEVAEKALGKHKERIGHRSIEVFKS 186
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + R +GEADVEF++ + A A+ + ++NM R IEL++ T
Sbjct: 307 NFFSPLNPVRVHIEIGPDERVTGEADVEFATHEGAVAAMSKDRANMQHRCIELFLNSTTG 366
Query: 82 S 82
+
Sbjct: 367 A 367
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYA--GRCTGVAYIQFVDKENAEKALL 202
++L+GLP+ C EDV+ FL I + YA GR +G A+++ +++ + AL
Sbjct: 13 VKLRGLPWSCSIEDVQNFLSDCTIHDGATGVHFIYAREGRQSGEAFVELESEDDVKMALK 72
Query: 203 RHKEKIGHRLVTLVMS 218
+ +E GH + + S
Sbjct: 73 KDRESTGHPYIKVFKS 88
Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D + +GEA V+F+S + A++AL +HK +G R IE++
Sbjct: 129 QFFSGLEIVPNGITLPVDSEDKITGEAFVQFASQEVAEKALGKHKERIGHRSIEVF 184
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+R++GLPY+ + + F L V I I D R TG A ++F E A A+ +
Sbjct: 290 CVRMRGLPYKATENHIYNFFSPLNPVRVHIEIGPDE--RVTGEADVEFATHEGAVAAMSK 347
Query: 204 HKEKIGHRLVTLVMS 218
+ + HR + L ++
Sbjct: 348 DRANMQHRCIELFLN 362
>gi|197246805|gb|AAI68807.1| hnrnph3 protein [Xenopus (Silurana) tropicalis]
Length = 413
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 93/187 (49%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I T GR SGEA + + +D ++AL++ + MG RYIE++
Sbjct: 37 IHFTTSKEGRPSGEAFIILDTEEDLKKALEKDRKYMGHRYIEVF---------------- 80
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ +EM+W LK +A D +RL+GLP
Sbjct: 81 --------------------------KSNNTEMEWVLKHNSTGDVDTASD-GTVRLRGLP 113
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GL IVPNGIT+ DY GR TG A++QF KE AE AL +HKE+IGHR
Sbjct: 114 FGCSKEEIVQFFSGLRIVPNGITLTVDYQGRSTGEAFVQFASKEIAENALGKHKERIGHR 173
Query: 212 LVTLVMS 218
+ + S
Sbjct: 174 YIEIFKS 180
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 21 SQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
+ FF P+ P+ + + GR++GEADVEF++ +DA A+ + K+NM RYIEL++
Sbjct: 299 ANFFSPLTPIRVHIDVGADGRATGEADVEFATHEDAVAAMSKDKNNMQHRYIELFL---- 354
Query: 81 SSKEANGRGTGGFG--GVKSTPYGV 103
+S G G G + G+ T YG
Sbjct: 355 NSTAGGGAGMGCYSRDGLDGTGYGA 379
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 QFFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A+ AL +HK +G RYIE++
Sbjct: 123 QFFSGLRIVPNGITLTVDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIF 178
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVP--NGITIPHDYAGRCTGVAYIQFVDKENAE 198
D+ +R++GLP+ C KE+V +F I+ +GI GR +G A+I +E+ +
Sbjct: 3 DEFIVRVRGLPWSCTKEEVLEFFSECSIIEGVSGIHFTTSKEGRPSGEAFIILDTEEDLK 62
Query: 199 KALLRHKEKIGHRLVTLVMSGA---QWFLSPPLTNE 231
KAL + ++ +GHR + + S +W L T +
Sbjct: 63 KALEKDRKYMGHRYIEVFKSNNTEMEWVLKHNSTGD 98
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+ ++GLP+ + D+ F L + I + D GR TG A ++F E+A A+ +
Sbjct: 284 VHMRGLPFRATESDIANFFSPLTPIRVHIDVGAD--GRATGEADVEFATHEDAVAAMSKD 341
Query: 205 KEKIGHRLVTLVMS 218
K + HR + L ++
Sbjct: 342 KNNMQHRYIELFLN 355
>gi|188528963|ref|NP_001120907.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Xenopus
(Silurana) tropicalis]
gi|183986477|gb|AAI66302.1| hnrnph3 protein [Xenopus (Silurana) tropicalis]
Length = 416
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 93/187 (49%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I T GR SGEA + + +D ++AL++ + MG RYIE++
Sbjct: 37 IHFTTSKEGRPSGEAFIILDTEEDLKKALEKDRKYMGHRYIEVF---------------- 80
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ +EM+W LK +A D +RL+GLP
Sbjct: 81 --------------------------KSNNTEMEWVLKHNSTGDVDTASD-GTVRLRGLP 113
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GL IVPNGIT+ DY GR TG A++QF KE AE AL +HKE+IGHR
Sbjct: 114 FGCSKEEIVQFFSGLRIVPNGITLTVDYQGRSTGEAFVQFASKEIAENALGKHKERIGHR 173
Query: 212 LVTLVMS 218
+ + S
Sbjct: 174 YIEIFKS 180
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 21 SQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
+ FF P+ P+ + + GR++GEADVEF++ +DA A+ + K+NM RYIEL++
Sbjct: 299 ANFFSPLTPIRVHIDVGADGRATGEADVEFATHEDAVAAMSKDKNNMQHRYIELFL---- 354
Query: 81 SSKEANGRGTG-----GFGGVKSTPYGV 103
+S G G G G G T YG
Sbjct: 355 NSTAGGGAGMGCYSRDGLGMSDGTGYGA 382
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 QFFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A+ AL +HK +G RYIE++
Sbjct: 123 QFFSGLRIVPNGITLTVDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIF 178
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVP--NGITIPHDYAGRCTGVAYIQFVDKENAE 198
D+ +R++GLP+ C KE+V +F I+ +GI GR +G A+I +E+ +
Sbjct: 3 DEFIVRVRGLPWSCTKEEVLEFFSECSIIEGVSGIHFTTSKEGRPSGEAFIILDTEEDLK 62
Query: 199 KALLRHKEKIGHRLVTLVMSGA---QWFLSPPLTNE 231
KAL + ++ +GHR + + S +W L T +
Sbjct: 63 KALEKDRKYMGHRYIEVFKSNNTEMEWVLKHNSTGD 98
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+ ++GLP+ + D+ F L + I + D GR TG A ++F E+A A+ +
Sbjct: 284 VHMRGLPFRATESDIANFFSPLTPIRVHIDVGAD--GRATGEADVEFATHEDAVAAMSKD 341
Query: 205 KEKIGHRLVTLVMS 218
K + HR + L ++
Sbjct: 342 KNNMQHRYIELFLN 355
>gi|148670393|gb|EDL02340.1| mCG50680 [Mus musculus]
Length = 338
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 76/114 (66%), Gaps = 4/114 (3%)
Query: 118 RAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPH 177
++ R+EMDW LK G + SA D +RL+GLP+ C KE++ +F GLEIVPNGIT+P
Sbjct: 10 KSHRTEMDWVLKHSGPNSADSAND-GFVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPV 68
Query: 178 DYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGAQ---WFLSPPL 228
D G+ TG A++QF +E AEKAL +HKE+IGHR + + S + + PPL
Sbjct: 69 DPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVRSYSDPPL 122
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 105/245 (42%), Gaps = 59/245 (24%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY---M 76
QFF IVP I L D G+ +GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 52 QFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQ 111
Query: 77 EE-----------------------GTSS------KEA------NGRGTGGFGGVK---- 97
EE GT+ K+A +G + G+GG +
Sbjct: 112 EEVRSYSDPPLKFMSVQRPGPYDRPGTARRYIGIVKQAGLDRMRSGAYSAGYGGYEEYSG 171
Query: 98 -STPYGVGIFCISQFLA---KWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYE 153
S YG + L+ M + + ++ ++ S C + ++GL Y+
Sbjct: 172 LSDGYGFTTDLFGRDLSYCLSGMYDHRYGDSEFTVQ--------STTGHC-VHMRGLSYK 222
Query: 154 CKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLV 213
+ D+ F L V I I D GR TG A ++F E A A+ + + + HR +
Sbjct: 223 ATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 280
Query: 214 TLVMS 218
L ++
Sbjct: 281 ELFLN 285
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++ T
Sbjct: 230 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTG 289
Query: 82 SKEA 85
+
Sbjct: 290 ASNG 293
>gi|194383864|dbj|BAG59290.1| unnamed protein product [Homo sapiens]
Length = 338
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 76/114 (66%), Gaps = 4/114 (3%)
Query: 118 RAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPH 177
++ R+EMDW LK G + SA D +RL+GLP+ C KE++ +F GLEIVPNGIT+P
Sbjct: 10 KSHRTEMDWVLKHSGPNSADSAND-GFVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPV 68
Query: 178 DYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGAQ---WFLSPPL 228
D G+ TG A++QF +E AEKAL +HKE+IGHR + + S + + PPL
Sbjct: 69 DPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVRSYSDPPL 122
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++ T
Sbjct: 230 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTG 289
Query: 82 SKEA 85
+
Sbjct: 290 ASNG 293
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D G+ +GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 52 QFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVF 107
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY+ + D+ F L V I I D GR TG A ++F E A A+ +
Sbjct: 213 CVHMRGLPYKATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEEAVAAMSK 270
Query: 204 HKEKIGHRLVTLVMS 218
+ + HR + L ++
Sbjct: 271 DRANMQHRYIELFLN 285
>gi|20987708|gb|AAH29764.1| Hnrpf protein [Mus musculus]
Length = 338
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 76/114 (66%), Gaps = 4/114 (3%)
Query: 118 RAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPH 177
++ R+EMDW LK G + SA D +RL+GLP+ C KE++ +F GLEIVPNGIT+P
Sbjct: 10 KSHRTEMDWVLKHSGPNSADSAND-GFVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPV 68
Query: 178 DYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGAQ---WFLSPPL 228
D G+ TG A++QF +E AEKAL +HKE+IGHR + + S + + PPL
Sbjct: 69 DPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVRSYSDPPL 122
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 106/245 (43%), Gaps = 59/245 (24%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY---M 76
QFF IVP I L D G+ +GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 52 QFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQ 111
Query: 77 EE-----------------------GTSS------KEA------NGRGTGGFGGVK---- 97
EE GT+ K+A +G + G+GG +
Sbjct: 112 EEVRSYSDPPLKFMSVQRPGPYDRPGTARRYIGIVKQAGLDRMRSGAYSAGYGGYEEYSG 171
Query: 98 -STPYGVGIFCISQFLA---KWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYE 153
S YG + L+ M + + ++ ++ S C + ++GLPY+
Sbjct: 172 LSDGYGFTTDLFGRDLSYCLSGMYDHRYGDSEFTVQ--------STTGHC-VHMRGLPYK 222
Query: 154 CKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLV 213
+ D+ F L V I I D GR TG A ++F E A A+ + + + HR +
Sbjct: 223 ATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 280
Query: 214 TLVMS 218
L ++
Sbjct: 281 ELFLN 285
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++ T
Sbjct: 230 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTG 289
Query: 82 SKEA 85
+
Sbjct: 290 ASNG 293
>gi|126328002|ref|XP_001371131.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like
[Monodelphis domestica]
Length = 466
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 98/201 (48%), Gaps = 47/201 (23%)
Query: 22 QFFKPIVPVN----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
QFF +N I + G+ SGEA VE S D+ AL++ + MG RY+E++
Sbjct: 29 QFFSECKILNEEAGIHFVYTREGKLSGEAFVELKSEDEITLALKKDRETMGHRYVEVF-- 86
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
R+ EMDW LK
Sbjct: 87 ----------------------------------------RSSNIEMDWVLKHTAPNSLD 106
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENA 197
+A D +RL+GLP+ C KE++ +F GLEI+PNGIT+P D+ GR +G A++QF +E A
Sbjct: 107 TASD-GFVRLRGLPFRCNKEEIVQFFSGLEIMPNGITLPVDFQGRNSGEAFVQFASQEIA 165
Query: 198 EKALLRHKEKIGHRLVTLVMS 218
EKAL ++KE IGHR + + S
Sbjct: 166 EKALKKNKETIGHRYIEIFKS 186
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 103/237 (43%), Gaps = 50/237 (21%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE- 78
QFF I+P I L D GR+SGEA V+F+S + A++AL+++K +G RYIE++
Sbjct: 129 QFFSGLEIMPNGITLPVDFQGRNSGEAFVQFASQEIAEKALKKNKETIGHRYIEIFKSSQ 188
Query: 79 -------------------GTSSKEANGRGTG------GFGGVKSTPYGVGI-------- 105
G + GRG GF G++ Y G
Sbjct: 189 AEAQTYYDFPRKLMARHRPGPYDRPQAGRGYSTLGRGVGFAGMRCGAYEAGYRGYDDYNW 248
Query: 106 ----FCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEK 161
+C ++L M + W+ Q +G V ++GLPY+ + D+
Sbjct: 249 YNDDYCFGRYLNLEMSDHSYGD-SWSTFNQSP--AGHYV-----HMRGLPYKATENDICD 300
Query: 162 FLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
F L+ V I I D GR TG A ++F E+A A+ + K + HR + L ++
Sbjct: 301 FFSPLKPVGAYIEIGPD--GRVTGEADVEFATHEDAVAAMSKDKANMQHRYIELFLN 355
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 61/140 (43%), Gaps = 8/140 (5%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQF 191
+L+ + ++++GLP+ C D+++F +I+ GI + G+ +G A+++
Sbjct: 2 MLNTKGEEGFVVKVRGLPWSCSASDIQQFFSECKILNEEAGIHFVYTREGKLSGEAFVEL 61
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA---QWFL---SPPLTNETPISRLDLTGSPVR 245
++ AL + +E +GHR V + S W L +P + + L G P R
Sbjct: 62 KSEDEITLALKKDRETMGHRYVEVFRSSNIEMDWVLKHTAPNSLDTASDGFVRLRGLPFR 121
Query: 246 STICVLCHPLTPRSVRPRSV 265
+ + + P +
Sbjct: 122 CNKEEIVQFFSGLEIMPNGI 141
>gi|20073357|gb|AAH27003.1| Hnrpf protein [Mus musculus]
Length = 338
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 76/114 (66%), Gaps = 4/114 (3%)
Query: 118 RAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPH 177
++ R+EMDW LK G + SA D +RL+GLP+ C KE++ +F GLEIVPNGIT+P
Sbjct: 10 KSHRTEMDWVLKHSGPNSADSAND-GFVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPV 68
Query: 178 DYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGAQ---WFLSPPL 228
D G+ TG A++QF +E AEKAL +HKE+IGHR + + S + + PPL
Sbjct: 69 DPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVRSYSDPPL 122
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++ T
Sbjct: 230 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTG 289
Query: 82 SKEA 85
+
Sbjct: 290 ASNG 293
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D G+ +GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 52 QFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVF 107
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY+ + D+ F L V I I D GR TG A ++F E A A+ +
Sbjct: 213 CVHMRGLPYKATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEEAVAAMSK 270
Query: 204 HKEKIGHRLVTLVMS 218
+ + HR + L ++
Sbjct: 271 DRANMQHRYIELFLN 285
>gi|156375031|ref|XP_001629886.1| predicted protein [Nematostella vectensis]
gi|156216896|gb|EDO37823.1| predicted protein [Nematostella vectensis]
Length = 354
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 99/199 (49%), Gaps = 50/199 (25%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGE V+F S D ++AL+ + +MG RYIE++
Sbjct: 46 GRPSGECFVQFVSEKDVEKALEMNNEHMGKRYIEVF------------------------ 81
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQ-CCMRLQGLPYECKKED 158
R+K EM+W +KR G S DQ ++L+GLPY C KE+
Sbjct: 82 ------------------RSKAEEMEWVIKRMGPP---SDRDQEAVVKLRGLPYGCSKEE 120
Query: 159 VEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+ +F GLEIVPNGITI D G+ TG +++F E A +A+ +HKEKIGHR + + S
Sbjct: 121 IAQFFTGLEIVPNGITITLDEEGKTTGEGFVEFASPEIAGQAMQKHKEKIGHRYIEIFKS 180
Query: 219 GA---QWFLSP-PLTNETP 233
++ L P PL + P
Sbjct: 181 SKSDIKYVLKPKPLMSTRP 199
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIV---PNGITIPHDYAGRCTGVAYIQFVDKENA 197
++C +R +GLP+ ED++ F + IV NG+ GR +G ++QFV +++
Sbjct: 3 NECVVRARGLPWSATPEDIQNFFKDCNIVGGPQNGVHFTFGIDGRPSGECFVQFVSEKDV 62
Query: 198 EKALLRHKEKIGHRLVTLVMSGAQ 221
EKAL + E +G R + + S A+
Sbjct: 63 EKALEMNNEHMGKRYIEVFRSKAE 86
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
+QFF IVP I + D+ G+++GE VEF+S + A +A+Q+HK +G RYIE++
Sbjct: 122 AQFFTGLEIVPNGITITLDEEGKTTGEGFVEFASPEIAGQAMQKHKEKIGHRYIEIF 178
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
QFF P+ PV + L GR GE +V+F++ DA A+ + + MG RYIEL++
Sbjct: 265 QFFMPLNPVEVRLRWGPDGRCCGEGEVDFATHADATAAMSKDRQTMGHRYIELFL 319
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKE 206
++GLP+ K+ DV++F + + P + + GRC G + F +A A+ + ++
Sbjct: 251 MRGLPFGAKETDVKQFF--MPLNPVEVRLRWGPDGRCCGEGEVDFATHADATAAMSKDRQ 308
Query: 207 KIGHRLVTLVMSGA 220
+GHR + L ++ +
Sbjct: 309 TMGHRYIELFLNSS 322
>gi|390361165|ref|XP_793087.3| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like isoform 2
[Strongylocentrotus purpuratus]
Length = 492
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 93/191 (48%), Gaps = 45/191 (23%)
Query: 28 VPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANG 87
P +I + + +GR SGE VEF S D Q+A+++ K+ + RYIEL+
Sbjct: 36 APDSIKFIFNSSGRPSGECFVEFDSEGDFQQAMKKDKNYLQKRYIELF------------ 83
Query: 88 RGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRL 147
++KRSEM+W R G + ++L
Sbjct: 84 ------------------------------KSKRSEMEWVTNRNSGGADGG---EGLVKL 110
Query: 148 QGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEK 207
+GLP+ C KE++ +F GL I NGIT+P D GR TG A++ F KE AEKAL +HK
Sbjct: 111 RGLPFSCSKEEIAEFFSGLTIQANGITLPSDNDGRRTGEAFVLFASKEIAEKALKKHKSH 170
Query: 208 IGHRLVTLVMS 218
+GHR + + S
Sbjct: 171 MGHRYIEVFKS 181
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FF I I L +D+ GR +GEA V F+S + A++AL++HKS+MG RYIE++
Sbjct: 123 AEFFSGLTIQANGITLPSDNDGRRTGEAFVLFASKEIAEKALKKHKSHMGHRYIEVFKSF 182
Query: 79 GTSSKEANGRGTGGFGGV-KSTPY 101
+ A GG GG+ + PY
Sbjct: 183 PDELRRATNPTRGGRGGMNRPGPY 206
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+ ++GLP+ ++D+++F G P+ + I HD G+ G A + F + A+ A+ +
Sbjct: 326 SVHMRGLPFSVTEQDIKEFFHG-SATPSNVVI-HDINGKRNGFAAVDFRTHDEAKAAMKK 383
Query: 204 HKEKIGHRLVTLVM 217
K IG R + L +
Sbjct: 384 DKNNIGSRYIELFL 397
Score = 43.9 bits (102), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 3 FSFYVIDILIHITYCLLCSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQR 62
+S ++ + +T + F P N+++ D G+ +G A V+F + D+A+ A+++
Sbjct: 325 YSVHMRGLPFSVTEQDIKEFFHGSATPSNVVI-HDINGKRNGFAAVDFRTHDEAKAAMKK 383
Query: 63 HKSNMGDRYIELYM 76
K+N+G RYIEL++
Sbjct: 384 DKNNIGSRYIELFL 397
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDK 194
G D +R +GLP+ E+V F E I+ P+ I + +GR +G +++F +
Sbjct: 2 GEEEDGYVIRARGLPWSTTAEEVMDFFEDCNILGAPDSIKFIFNSSGRPSGECFVEFDSE 61
Query: 195 ENAEKALLRHKEKIGHRLVTLVMS 218
+ ++A+ + K + R + L S
Sbjct: 62 GDFQQAMKKDKNYLQKRYIELFKS 85
>gi|390361167|ref|XP_003729861.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like isoform 1
[Strongylocentrotus purpuratus]
Length = 455
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 93/191 (48%), Gaps = 45/191 (23%)
Query: 28 VPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANG 87
P +I + + +GR SGE VEF S D Q+A+++ K+ + RYIEL+
Sbjct: 36 APDSIKFIFNSSGRPSGECFVEFDSEGDFQQAMKKDKNYLQKRYIELF------------ 83
Query: 88 RGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRL 147
++KRSEM+W R G + ++L
Sbjct: 84 ------------------------------KSKRSEMEWVTNRNSGGADGG---EGLVKL 110
Query: 148 QGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEK 207
+GLP+ C KE++ +F GL I NGIT+P D GR TG A++ F KE AEKAL +HK
Sbjct: 111 RGLPFSCSKEEIAEFFSGLTIQANGITLPSDNDGRRTGEAFVLFASKEIAEKALKKHKSH 170
Query: 208 IGHRLVTLVMS 218
+GHR + + S
Sbjct: 171 MGHRYIEVFKS 181
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FF I I L +D+ GR +GEA V F+S + A++AL++HKS+MG RYIE++
Sbjct: 123 AEFFSGLTIQANGITLPSDNDGRRTGEAFVLFASKEIAEKALKKHKSHMGHRYIEVFKSF 182
Query: 79 GTSSKEANGRGTGGFGGV-KSTPY 101
+ A GG GG+ + PY
Sbjct: 183 PDELRRATNPTRGGRGGMNRPGPY 206
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+ ++GLP+ ++D+++F G P+ + I HD G+ G A + F + A+ A+ +
Sbjct: 326 SVHMRGLPFSVTEQDIKEFFHG-SATPSNVVI-HDINGKRNGFAAVDFRTHDEAKAAMKK 383
Query: 204 HKEKIGHRLVTLVMSGAQ 221
K IG R + L + ++
Sbjct: 384 DKNNIGSRYIELFLHSSE 401
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 3 FSFYVIDILIHITYCLLCSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQR 62
+S ++ + +T + F P N+++ D G+ +G A V+F + D+A+ A+++
Sbjct: 325 YSVHMRGLPFSVTEQDIKEFFHGSATPSNVVI-HDINGKRNGFAAVDFRTHDEAKAAMKK 383
Query: 63 HKSNMGDRYIELYM 76
K+N+G RYIEL++
Sbjct: 384 DKNNIGSRYIELFL 397
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDK 194
G D +R +GLP+ E+V F E I+ P+ I + +GR +G +++F +
Sbjct: 2 GEEEDGYVIRARGLPWSTTAEEVMDFFEDCNILGAPDSIKFIFNSSGRPSGECFVEFDSE 61
Query: 195 ENAEKALLRHKEKIGHRLVTLVMS 218
+ ++A+ + K + R + L S
Sbjct: 62 GDFQQAMKKDKNYLQKRYIELFKS 85
>gi|348575706|ref|XP_003473629.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like [Cavia
porcellus]
Length = 372
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 77/132 (58%), Gaps = 7/132 (5%)
Query: 99 TPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKED 158
P G G+ +FL ++ EMDW +K G + +RL+GLP+ C KE+
Sbjct: 2 APDGPGLPPRPRFLRSLAFKSNGIEMDWVMKHNGP----NDASDGTVRLRGLPFGCSKEE 57
Query: 159 VEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+ +F +GLEIVPNGIT+ DY GR TG A++QF KE AE AL +HKE+IGHR + + S
Sbjct: 58 IVQFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFRS 117
Query: 219 G---AQWFLSPP 227
+ F PP
Sbjct: 118 SRSEIKGFYDPP 129
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K+NM RYIEL++
Sbjct: 237 IANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIELFLN 294
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF+ IVP I L D GRS+GEA V+F+S + A+ AL +HK +G RYIE++
Sbjct: 60 QFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIF 115
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKE 206
++GLP+ + D+ F L + I I D GR TG A ++FV E+A A+ + K
Sbjct: 225 MRGLPFRATENDIANFFSPLNPIRVHIDIGAD--GRATGEADVEFVTHEDAVAAMSKDKN 282
Query: 207 KIGHRLVTLVMS 218
+ HR + L ++
Sbjct: 283 NMQHRYIELFLN 294
>gi|335775266|gb|AEH58514.1| heterogeneous nuclear ribonucleoprotein-like protein [Equus
caballus]
Length = 337
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 76/114 (66%), Gaps = 4/114 (3%)
Query: 118 RAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPH 177
++ R+EMDW LK G + +A D +RL+GLP+ C KE++ +F GLEIVPNGIT+P
Sbjct: 10 KSHRTEMDWVLKHSGPNSADTAND-GFVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPV 68
Query: 178 DYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGAQ---WFLSPPL 228
D G+ TG A++QF +E AEKAL +HKE+IGHR + + S + + PPL
Sbjct: 69 DPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVRSYSDPPL 122
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 103/242 (42%), Gaps = 53/242 (21%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY---M 76
QFF IVP I L D G+ +GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 52 QFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQ 111
Query: 77 EE-----------------------GTSS------KEA------NGRGTGGFGGVK---- 97
EE GT+ K+A +G + G+GG +
Sbjct: 112 EEVRSYSDPPLKFMSVQRPGPYDRPGTARRYIGIVKQAGLERMRSGAYSAGYGGYEEYSG 171
Query: 98 -STPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKK 156
S YG + L+ + S M G S C + ++GLPY+ +
Sbjct: 172 LSDGYGFTTDLFGRDLSYCL-----SGMYDHRYGDGEFTVQSTTGHC-VHMRGLPYKATE 225
Query: 157 EDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLV 216
D+ F L V I I D GR TG A ++F E A A+ + + + HR + L
Sbjct: 226 NDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELF 283
Query: 217 MS 218
++
Sbjct: 284 LN 285
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++ T
Sbjct: 230 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTG 289
Query: 82 SKEA 85
+
Sbjct: 290 ASNG 293
>gi|344240722|gb|EGV96825.1| Heterogeneous nuclear ribonucleoprotein F [Cricetulus griseus]
Length = 241
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 91/173 (52%), Gaps = 45/173 (26%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKS--NMGDRYIELYMEEGTSSKEANGRGTGGFGGVK 97
GR SGEA VE S +D + AL++ K +MG RYIE++
Sbjct: 50 GRQSGEAFVELQSENDVKLALKKKKDRESMGHRYIEVF---------------------- 87
Query: 98 STPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKE 157
++ R++MDW LK G+ + SA D +RL GLP+ C KE
Sbjct: 88 --------------------KSHRTKMDWVLKHSGSNRANSAND-GFVRLPGLPFGCTKE 126
Query: 158 DVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGH 210
++ +F GLEIVPNGIT+P D G+ TG A+IQ +E AEKAL +HKE+IG
Sbjct: 127 EIVQFFSGLEIVPNGITLPVDPEGKITGEAFIQIASQELAEKALGKHKERIGQ 179
>gi|390361163|ref|XP_003729860.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like isoform 2
[Strongylocentrotus purpuratus]
Length = 521
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 89/182 (48%), Gaps = 44/182 (24%)
Query: 39 AGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKS 98
GR SGE V F S DD + L+++ +++G RYIE++
Sbjct: 45 GGRPSGECFVVFESHDDVLKGLKKNNNHIGHRYIEVF----------------------- 81
Query: 99 TPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKED 158
R+K SEM+W R G + C+RL+GLP++C+ +D
Sbjct: 82 -------------------RSKNSEMEWVTSRGGD--KAKEENDGCVRLRGLPFDCRTDD 120
Query: 159 VEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+ F + +I +GIT+P DY GR TG AY+QFV K+ AE AL +HK +GHR + +
Sbjct: 121 INDFFKEYQIAEDGITLPTDYDGRSTGEAYVQFVSKDIAEGALSKHKANMGHRYIEVFQC 180
Query: 219 GA 220
A
Sbjct: 181 NA 182
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 21 SQFFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
+ FFK I I L TD GRS+GEA V+F S D A+ AL +HK+NMG RYIE++
Sbjct: 122 NDFFKEYQIAEDGITLPTDYDGRSTGEAYVQFVSKDIAEGALSKHKANMGHRYIEVFQCN 181
Query: 79 GTSSKEAN---GRGTG 91
+ K N GR G
Sbjct: 182 ASEIKRFNSNPGRARG 197
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
Query: 22 QFF-KPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
QFF + P N+++ + GRS+GEAD +F +V+ AQ A+ +HKS MG RYIEL++
Sbjct: 348 QFFGQTASPCNVVIQKVN-GRSTGEADADFQTVEAAQAAMTKHKSEMGPRYIELFL 402
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+ ++GLPY+ +ED+ +F G P + I GR TG A F E A+ A+ +
Sbjct: 331 SIHMRGLPYKATEEDIHQFF-GQTASPCNVVI-QKVNGRSTGEADADFQTVEAAQAAMTK 388
Query: 204 HKEKIGHRLVTLVMS 218
HK ++G R + L ++
Sbjct: 389 HKSEMGPRYIELFLN 403
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEG--LEIVPNGITIPHDYAGRCTGVAYIQFVDKENAE 198
D +R +GLP+ ED+ F +E +G+ H GR +G ++ F ++
Sbjct: 4 DGFIVRARGLPWSATAEDIVTFFSESVIEGGADGVKFVHLPGGRPSGECFVVFESHDDVL 63
Query: 199 KALLRHKEKIGHRLVTLVMS 218
K L ++ IGHR + + S
Sbjct: 64 KGLKKNNNHIGHRYIEVFRS 83
>gi|390361161|ref|XP_003729859.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like isoform 1
[Strongylocentrotus purpuratus]
Length = 515
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 89/182 (48%), Gaps = 44/182 (24%)
Query: 39 AGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKS 98
GR SGE V F S DD + L+++ +++G RYIE++
Sbjct: 45 GGRPSGECFVVFESHDDVLKGLKKNNNHIGHRYIEVF----------------------- 81
Query: 99 TPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKED 158
R+K SEM+W R G + C+RL+GLP++C+ +D
Sbjct: 82 -------------------RSKNSEMEWVTSRGGD--KAKEENDGCVRLRGLPFDCRTDD 120
Query: 159 VEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+ F + +I +GIT+P DY GR TG AY+QFV K+ AE AL +HK +GHR + +
Sbjct: 121 INDFFKEYQIAEDGITLPTDYDGRSTGEAYVQFVSKDIAEGALSKHKANMGHRYIEVFQC 180
Query: 219 GA 220
A
Sbjct: 181 NA 182
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 21 SQFFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
+ FFK I I L TD GRS+GEA V+F S D A+ AL +HK+NMG RYIE++
Sbjct: 122 NDFFKEYQIAEDGITLPTDYDGRSTGEAYVQFVSKDIAEGALSKHKANMGHRYIEVFQCN 181
Query: 79 GTSSKEAN---GRGTG 91
+ K N GR G
Sbjct: 182 ASEIKRFNSNPGRARG 197
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
Query: 22 QFF-KPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
QFF + P N+++ + GRS+GEAD +F +V+ AQ A+ +HKS MG RYIEL++
Sbjct: 348 QFFGQTASPCNVVIQKVN-GRSTGEADADFQTVEAAQAAMTKHKSEMGPRYIELFL 402
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+ ++GLPY+ +ED+ +F G P + I GR TG A F E A+ A+ +
Sbjct: 331 SIHMRGLPYKATEEDIHQFF-GQTASPCNVVI-QKVNGRSTGEADADFQTVEAAQAAMTK 388
Query: 204 HKEKIGHRLVTLVMS 218
HK ++G R + L ++
Sbjct: 389 HKSEMGPRYIELFLN 403
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEG--LEIVPNGITIPHDYAGRCTGVAYIQFVDKENAE 198
D +R +GLP+ ED+ F +E +G+ H GR +G ++ F ++
Sbjct: 4 DGFIVRARGLPWSATAEDIVTFFSESVIEGGADGVKFVHLPGGRPSGECFVVFESHDDVL 63
Query: 199 KALLRHKEKIGHRLVTLVMS 218
K L ++ IGHR + + S
Sbjct: 64 KGLKKNNNHIGHRYIEVFRS 83
>gi|390361159|ref|XP_798587.3| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like isoform 3
[Strongylocentrotus purpuratus]
Length = 500
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 89/182 (48%), Gaps = 44/182 (24%)
Query: 39 AGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKS 98
GR SGE V F S DD + L+++ +++G RYIE++
Sbjct: 45 GGRPSGECFVVFESHDDVLKGLKKNNNHIGHRYIEVF----------------------- 81
Query: 99 TPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKED 158
R+K SEM+W R G + C+RL+GLP++C+ +D
Sbjct: 82 -------------------RSKNSEMEWVTSRGGD--KAKEENDGCVRLRGLPFDCRTDD 120
Query: 159 VEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+ F + +I +GIT+P DY GR TG AY+QFV K+ AE AL +HK +GHR + +
Sbjct: 121 INDFFKEYQIAEDGITLPTDYDGRSTGEAYVQFVSKDIAEGALSKHKANMGHRYIEVFQC 180
Query: 219 GA 220
A
Sbjct: 181 NA 182
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 21 SQFFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
+ FFK I I L TD GRS+GEA V+F S D A+ AL +HK+NMG RYIE++
Sbjct: 122 NDFFKEYQIAEDGITLPTDYDGRSTGEAYVQFVSKDIAEGALSKHKANMGHRYIEVFQCN 181
Query: 79 GTSSKEAN---GRGTG 91
+ K N GR G
Sbjct: 182 ASEIKRFNSNPGRARG 197
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
Query: 22 QFF-KPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
QFF + P N+++ + GRS+GEAD +F +V+ AQ A+ +HKS MG RYIEL++
Sbjct: 333 QFFGQTASPCNVVIQKVN-GRSTGEADADFQTVEAAQAAMTKHKSEMGPRYIELFL 387
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+ ++GLPY+ +ED+ +F G P + I GR TG A F E A+ A+ +
Sbjct: 316 SIHMRGLPYKATEEDIHQFF-GQTASPCNVVI-QKVNGRSTGEADADFQTVEAAQAAMTK 373
Query: 204 HKEKIGHRLVTLVMS 218
HK ++G R + L ++
Sbjct: 374 HKSEMGPRYIELFLN 388
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEG--LEIVPNGITIPHDYAGRCTGVAYIQFVDKENAE 198
D +R +GLP+ ED+ F +E +G+ H GR +G ++ F ++
Sbjct: 4 DGFIVRARGLPWSATAEDIVTFFSESVIEGGADGVKFVHLPGGRPSGECFVVFESHDDVL 63
Query: 199 KALLRHKEKIGHRLVTLVMS 218
K L ++ IGHR + + S
Sbjct: 64 KGLKKNNNHIGHRYIEVFRS 83
>gi|168015582|ref|XP_001760329.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688343|gb|EDQ74720.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 550
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 107/206 (51%), Gaps = 14/206 (6%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME- 77
+ FFK +V I L T GR +GEA VEF++ + A RA+Q H+ MG RY+EL+
Sbjct: 161 TAFFKGMQVVADGIFLCTHADGRPTGEAFVEFANEEIAARAMQLHREPMGSRYVELFRST 220
Query: 78 EGTSSKEANGR------GTGGFG--GVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALK 129
+G R G GGF GV P +G F + + + + +
Sbjct: 221 KGEMMTAVQQRMYGMFSGAGGFSQFGVGQIPGMMGAFGVQGLTGMNLAAVQAAGLGSMTG 280
Query: 130 RQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYI 189
QG LS ++ + C++++GLPY + ++ F EG I+PNGI I R TG A++
Sbjct: 281 LQG--LSDTS-EHVCIKMRGLPYNAGQREIMDFFEGYNILPNGIHIVMGATDRPTGEAFV 337
Query: 190 QFVDKENAEKALLRHKEKIGHRLVTL 215
+F+ + A++A+ RH++ IG R + L
Sbjct: 338 EFISSDEAQRAMERHRQNIGSRYIEL 363
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 103/204 (50%), Gaps = 28/204 (13%)
Query: 21 SQFFKPIV--PVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
+ FFK + P +++ + GRS+G+A V+F++ + A +AL+R++ ++G RYIE++
Sbjct: 38 ADFFKGLEMGPDGVVICVNFQGRSTGQAYVQFATAELANKALERNRQHIGSRYIEVFKGH 97
Query: 79 GTSSKEA---NGRGTGGFGGVKSTPYGVGIFCISQFLAKWM-RRAKRSEMDWALKRQGAV 134
+ A GRG+G T G G L + + +M +
Sbjct: 98 PADMQGALRMVGRGSG-------TVTGSGAVATGGILNTGIPGMSGNPDMRYT------- 143
Query: 135 LSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDK 194
+R++G+PY C D+ F +G+++V +GI + GR TG A+++F ++
Sbjct: 144 --------GVVRMRGMPYSCTSADITAFFKGMQVVADGIFLCTHADGRPTGEAFVEFANE 195
Query: 195 ENAEKALLRHKEKIGHRLVTLVMS 218
E A +A+ H+E +G R V L S
Sbjct: 196 EIAARAMQLHREPMGSRYVELFRS 219
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Query: 132 GAVLSGSAVD-----QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGV 186
G ++ GSA+D +RL+GLP+ + D+ F +GLE+ P+G+ I ++ GR TG
Sbjct: 5 GGLVGGSALDDELKRSNVVRLRGLPFSASESDIADFFKGLEMGPDGVVICVNFQGRSTGQ 64
Query: 187 AYIQFVDKENAEKALLRHKEKIGHRLV 213
AY+QF E A KAL R+++ IG R +
Sbjct: 65 AYVQFATAELANKALERNRQHIGSRYI 91
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 35/49 (71%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
I+P I ++ R +GEA VEF S D+AQRA++RH+ N+G RYIEL+
Sbjct: 316 ILPNGIHIVMGATDRPTGEAFVEFISSDEAQRAMERHRQNIGSRYIELF 364
>gi|334313810|ref|XP_001369254.2| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like
[Monodelphis domestica]
Length = 377
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 67/108 (62%), Gaps = 6/108 (5%)
Query: 123 EMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGR 182
EMDW +K G A +RL+GLP+ C KE++ +F GLEIVPNGIT+ DY GR
Sbjct: 30 EMDWVMKHNGP---NDAASDGTVRLRGLPFGCSKEEIVQFFTGLEIVPNGITLTMDYQGR 86
Query: 183 CTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG---AQWFLSPP 227
TG A++QF KE AE AL +HKE+IGHR + + S + F PP
Sbjct: 87 STGEAFVQFASKEIAENALGKHKERIGHRYIEIFKSSRSEIKGFYDPP 134
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K+NM RYIEL++
Sbjct: 242 IANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIELFLN 299
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A+ AL +HK +G RYIE++
Sbjct: 65 QFFTGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIF 120
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+ ++GLP+ + D+ F L + I I D GR TG A ++FV E+A A+ +
Sbjct: 228 VHMRGLPFRATENDIANFFSPLNPIRVHIDIGAD--GRATGEADVEFVTHEDAVAAMSKD 285
Query: 205 KEKIGHRLVTLVMS 218
K + HR + L ++
Sbjct: 286 KNNMQHRYIELFLN 299
>gi|18266700|ref|NP_543172.1| heterogeneous nuclear ribonucleoprotein H [Rattus norvegicus]
gi|18104446|gb|AAL59557.1| Ratsg1 [Rattus norvegicus]
Length = 372
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 118 RAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPH 177
++ EMDW LK G +A D +RL+GLP+ C +E++ +F GLEIVPNGIT+P
Sbjct: 10 KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRGLPFGCSEEEIVQFFSGLEIVPNGITLPV 68
Query: 178 DYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
D+ GR TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 69 DFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKS 109
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF P+ PV + + T GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 230 NFFSPLNPVRVHIETGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLN 285
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 52 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 107
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I D GR TG A ++F E+A A+ +
Sbjct: 213 CVHMRGLPYRATENDIYNFFSPLNPVRVHIETGPD--GRVTGEADVEFATHEDAVAAMSK 270
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 271 DKANMQHRYVELFLN 285
>gi|327277958|ref|XP_003223730.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like isoform
1 [Anolis carolinensis]
Length = 341
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 69/107 (64%), Gaps = 6/107 (5%)
Query: 124 MDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC 183
MDWA K G S S +RL+GLP+ C KE++ +F +GLEIVPNGIT+ DY GR
Sbjct: 1 MDWAGKHNGPNDSSS---DGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTLDYQGRS 57
Query: 184 TGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGA---QWFLSPP 227
TG A++QF KE AEKAL +HKE+IGHR + + S + F PP
Sbjct: 58 TGEAFVQFASKEIAEKALGKHKERIGHRYIEIFKSSKSEIRGFYDPP 104
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K++M RYIEL++
Sbjct: 212 IANFFSPLTPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNHMQHRYIELFLN 269
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF+ IVP I L D GRS+GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 35 QFFQGLEIVPNGITLTLDYQGRSTGEAFVQFASKEIAEKALGKHKERIGHRYIEIF 90
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKE 206
++GLP+ + D+ F L + I I D GR TG A ++FV E+A A+ + K
Sbjct: 200 MRGLPFRATENDIANFFSPLTPIRVHIDIGAD--GRATGEADVEFVTHEDAVAAMSKDKN 257
Query: 207 KIGHRLVTLVMS 218
+ HR + L ++
Sbjct: 258 HMQHRYIELFLN 269
>gi|327277960|ref|XP_003223731.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like isoform
2 [Anolis carolinensis]
Length = 326
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 69/107 (64%), Gaps = 6/107 (5%)
Query: 124 MDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC 183
MDWA K G S S +RL+GLP+ C KE++ +F +GLEIVPNGIT+ DY GR
Sbjct: 1 MDWAGKHNGPNDSSS---DGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTLDYQGRS 57
Query: 184 TGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGA---QWFLSPP 227
TG A++QF KE AEKAL +HKE+IGHR + + S + F PP
Sbjct: 58 TGEAFVQFASKEIAEKALGKHKERIGHRYIEIFKSSKSEIRGFYDPP 104
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K++M RYIEL++
Sbjct: 197 IANFFSPLTPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNHMQHRYIELFLN 254
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF+ IVP I L D GRS+GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 35 QFFQGLEIVPNGITLTLDYQGRSTGEAFVQFASKEIAEKALGKHKERIGHRYIEIF 90
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+ ++GLP+ + D+ F L + I I D GR TG A ++FV E+A A+ +
Sbjct: 183 VHMRGLPFRATENDIANFFSPLTPIRVHIDIGAD--GRATGEADVEFVTHEDAVAAMSKD 240
Query: 205 KEKIGHRLVTLVMS 218
K + HR + L ++
Sbjct: 241 KNHMQHRYIELFLN 254
>gi|343961567|dbj|BAK62373.1| heterogeneous nuclear ribonucleoprotein H [Pan troglodytes]
Length = 357
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 124 MDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC 183
MDW LK G +A D +RL+GLP+ C KE++ +F GLEIVPNGIT+P D+ GR
Sbjct: 1 MDWVLKHTGPNSPDTAND-GFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRS 59
Query: 184 TGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 60 TGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKS 94
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 215 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLN 270
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 37 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 92
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 198 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 255
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 256 DKANMQHRYVELFLN 270
>gi|355761375|gb|EHH61795.1| hypothetical protein EGM_19914 [Macaca fascicularis]
Length = 357
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 124 MDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC 183
MDW LK G +A D +RL+GLP+ C KE++ +F GLEIVPNGIT+P D+ GR
Sbjct: 1 MDWVLKHTGPNSPDTAND-GFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRS 59
Query: 184 TGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 60 TGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKS 94
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 215 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLN 270
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 37 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 92
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 198 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 255
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 256 DKANMQHRYVELFLN 270
>gi|431904171|gb|ELK09593.1| Heterogeneous nuclear ribonucleoprotein H3 [Pteropus alecto]
Length = 405
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 68/108 (62%), Gaps = 7/108 (6%)
Query: 123 EMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGR 182
EMDW +K G + +RL+GLP+ C KE++ +F +GLEIVPNGIT+ DY GR
Sbjct: 59 EMDWVMKHNGP----NDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGR 114
Query: 183 CTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG---AQWFLSPP 227
TG A++QF KE AE AL +HKE+IGHR + + S + F PP
Sbjct: 115 STGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSSRSEIKGFYDPP 162
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K+NM RYIEL++
Sbjct: 270 IANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIELFLN 327
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF+ IVP I L D GRS+GEA V+F+S + A+ AL +HK +G RYIE++
Sbjct: 93 QFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIF 148
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+ ++GLP+ + D+ F L + I I D GR TG A ++FV E+A A+ +
Sbjct: 256 VHMRGLPFRATENDIANFFSPLNPIRVHIDIGAD--GRATGEADVEFVTHEDAVAAMSKD 313
Query: 205 KEKIGHRLVTLVMS 218
K + HR + L ++
Sbjct: 314 KNNMQHRYIELFLN 327
>gi|198417021|ref|XP_002122500.1| PREDICTED: similar to Heterogeneous nuclear ribonucleoprotein H2
(hnRNP H2) (Heterogeneous nuclear ribonucleoprotein H)
(hnRNP H) (FTP-3) [Ciona intestinalis]
Length = 420
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 89/183 (48%), Gaps = 43/183 (23%)
Query: 36 TDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGG 95
TDD R SGEA VE +S Q ++ +G RYIE++
Sbjct: 42 TDDQ-RPSGEAFVEVTSQKSLQTCFEKDHQLIGKRYIEVF-------------------- 80
Query: 96 VKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECK 155
+ EM++ L + SA +RL+GLP++C
Sbjct: 81 ----------------------ESSVKEMEYVLGLSEEEIGSSAQADVFVRLRGLPFQCS 118
Query: 156 KEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTL 215
KE+V +F GLEIVPNGIT+P D GR TG AY++F E+AEKAL +HKEKIGHR + +
Sbjct: 119 KEEVAQFFSGLEIVPNGITLPLDDNGRSTGEAYVEFGSPESAEKALTKHKEKIGHRYIEI 178
Query: 216 VMS 218
S
Sbjct: 179 FKS 181
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Query: 20 CSQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+QFF IVP I L DD GRS+GEA VEF S + A++AL +HK +G RYIE++
Sbjct: 122 VAQFFSGLEIVPNGITLPLDDNGRSTGEAYVEFGSPESAEKALTKHKEKIGHRYIEIFKS 181
Query: 78 EGTSSKEANG------RGTGGFGGVKSTPY 101
E+ G RG G G + PY
Sbjct: 182 SKRELMESQGEYMDDERGFGSRG--RPGPY 209
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+VPV + + D GR +GE V F+S DAQ A+Q++K + RYIEL++
Sbjct: 335 NFFSPLVPVRVNIEYSDDGRVTGEGTVFFASYQDAQAAMQKNKECIQHRYIELFL 389
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
Q +R++GLP++C+++DV F L VP + I + GR TG + F ++A+ A+
Sbjct: 316 QFVVRMRGLPFKCQEQDVFNFFSPL--VPVRVNIEYSDDGRVTGEGTVFFASYQDAQAAM 373
Query: 202 LRHKEKIGHRLVTLVM 217
++KE I HR + L +
Sbjct: 374 QKNKECIQHRYIELFL 389
>gi|395521348|ref|XP_003764780.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2-like
[Sarcophilus harrisii]
Length = 304
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 93/187 (49%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S ++ + AL++H+ M RY+E++
Sbjct: 42 IHFIYTREGRPSGEAFVELESEEEVELALKKHRETMAHRYVEVF---------------- 85
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
R+ EMDW LKR A D +RL+GLP
Sbjct: 86 --------------------------RSNAVEMDWTLKRTAPNSPDPAGD-GYVRLRGLP 118
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KED+ +F GLEI+PNGI + D+ GR +G A++QF +E AEKAL +HKE++GHR
Sbjct: 119 FNCNKEDIVQFFSGLEIMPNGIMLQVDFRGRNSGEAFVQFASQEIAEKALKKHKERMGHR 178
Query: 212 LVTLVMS 218
+ + S
Sbjct: 179 YIEIFKS 185
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF I+P I+L D GR+SGEA V+F+S + A++AL++HK MG RYIE++
Sbjct: 128 QFFSGLEIMPNGIMLQVDFRGRNSGEAFVQFASQEIAEKALKKHKERMGHRYIEIF 183
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQF 191
+LS A ++++GLP+ C DV+ F G I GI + GR +G A+++
Sbjct: 1 MLSIKAEGSFVVKVRGLPWSCSASDVQHFFSGCRIRNGVAGIHFIYTREGRPSGEAFVEL 60
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E E AL +H+E + HR V + S A
Sbjct: 61 ESEEEVELALKKHRETMAHRYVEVFRSNA 89
>gi|395501374|ref|XP_003755070.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 [Sarcophilus
harrisii]
Length = 342
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 66/107 (61%), Gaps = 6/107 (5%)
Query: 124 MDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC 183
MDW +K G A +RL+GLP+ C KE++ +F GLEIVPNGIT+ DY GR
Sbjct: 1 MDWVMKHNGP---NDAASDGTVRLRGLPFGCSKEEIVQFFTGLEIVPNGITLTMDYQGRS 57
Query: 184 TGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG---AQWFLSPP 227
TG A++QF KE AE AL +HKE+IGHR + + S + F PP
Sbjct: 58 TGEAFVQFASKEIAENALGKHKERIGHRYIEIFKSSRSEIKGFYDPP 104
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K+NM RYIEL++
Sbjct: 212 IANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDALAAMSKDKNNMQHRYIELFLN 269
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A+ AL +HK +G RYIE++
Sbjct: 35 QFFTGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIF 90
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKE 206
++GLP+ + D+ F L + I I D GR TG A ++FV E+A A+ + K
Sbjct: 200 MRGLPFRATENDIANFFSPLNPIRVHIDIGAD--GRATGEADVEFVTHEDALAAMSKDKN 257
Query: 207 KIGHRLVTLVMS 218
+ HR + L ++
Sbjct: 258 NMQHRYIELFLN 269
>gi|301755896|ref|XP_002913784.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like
[Ailuropoda melanoleuca]
gi|281346969|gb|EFB22553.1| hypothetical protein PANDA_001623 [Ailuropoda melanoleuca]
Length = 346
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 67/107 (62%), Gaps = 7/107 (6%)
Query: 124 MDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC 183
MDW +K G + +RL+GLP+ C KE++ +F +GLEIVPNGIT+ DY GR
Sbjct: 1 MDWVMKHNGP----NDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRS 56
Query: 184 TGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG---AQWFLSPP 227
TG A++QF KE AE AL +HKE+IGHR + + S + F PP
Sbjct: 57 TGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSSRSEIKGFYDPP 103
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K+NM RYIEL++
Sbjct: 211 IANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIELFLN 268
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF+ IVP I L D GRS+GEA V+F+S + A+ AL +HK +G RYIE++
Sbjct: 34 QFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIF 89
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKE 206
++GLP+ + D+ F L + I I D GR TG A ++FV E+A A+ + K
Sbjct: 199 MRGLPFRATENDIANFFSPLNPIRVHIDIGAD--GRATGEADVEFVTHEDAVAAMSKDKN 256
Query: 207 KIGHRLVTLVMS 218
+ HR + L ++
Sbjct: 257 NMQHRYIELFLN 268
>gi|14141157|ref|NP_036339.1| heterogeneous nuclear ribonucleoprotein H3 isoform a [Homo sapiens]
gi|343780936|ref|NP_001230484.1| heterogeneous nuclear ribonucleoprotein H3 [Sus scrofa]
gi|388452508|ref|NP_001253678.1| heterogeneous nuclear ribonucleoprotein H3 [Macaca mulatta]
gi|73952781|ref|XP_536369.2| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Canis lupus familiaris]
gi|149689928|ref|XP_001503654.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Equus caballus]
gi|291404271|ref|XP_002718501.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like isoform
1 [Oryctolagus cuniculus]
gi|296220546|ref|XP_002756352.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Callithrix jacchus]
gi|332218213|ref|XP_003258253.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Nomascus leucogenys]
gi|332834180|ref|XP_521495.3| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 2
[Pan troglodytes]
gi|397520483|ref|XP_003830346.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Pan paniscus]
gi|402880658|ref|XP_003903915.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Papio anubis]
gi|403273867|ref|XP_003928719.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Saimiri boliviensis boliviensis]
gi|410975227|ref|XP_003994035.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Felis catus]
gi|410975229|ref|XP_003994036.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 2
[Felis catus]
gi|426364932|ref|XP_004049545.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Gorilla gorilla gorilla]
gi|23503095|sp|P31942.2|HNRH3_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein H3;
Short=hnRNP H3; AltName: Full=Heterogeneous nuclear
ribonucleoprotein 2H9; Short=hnRNP 2H9
gi|5542020|gb|AAD45179.1|L32610_1 ribonucleoprotein [Homo sapiens]
gi|7739436|gb|AAF68843.1| hnRNP 2H9 [Homo sapiens]
gi|119574665|gb|EAW54280.1| heterogeneous nuclear ribonucleoprotein H3 (2H9), isoform CRA_a
[Homo sapiens]
gi|119574670|gb|EAW54285.1| heterogeneous nuclear ribonucleoprotein H3 (2H9), isoform CRA_a
[Homo sapiens]
gi|351702487|gb|EHB05406.1| Heterogeneous nuclear ribonucleoprotein H3 [Heterocephalus glaber]
gi|355562560|gb|EHH19154.1| hypothetical protein EGK_19802 [Macaca mulatta]
gi|355782891|gb|EHH64812.1| hypothetical protein EGM_18125 [Macaca fascicularis]
gi|380784275|gb|AFE64013.1| heterogeneous nuclear ribonucleoprotein H3 isoform a [Macaca
mulatta]
gi|380812322|gb|AFE78035.1| heterogeneous nuclear ribonucleoprotein H3 isoform a [Macaca
mulatta]
gi|410221428|gb|JAA07933.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Pan troglodytes]
gi|410221430|gb|JAA07934.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Pan troglodytes]
gi|410258984|gb|JAA17458.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Pan troglodytes]
gi|410258988|gb|JAA17460.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Pan troglodytes]
gi|410302442|gb|JAA29821.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Pan troglodytes]
gi|410302446|gb|JAA29823.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Pan troglodytes]
gi|410342067|gb|JAA39980.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Pan troglodytes]
gi|410342069|gb|JAA39981.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Pan troglodytes]
gi|432106705|gb|ELK32357.1| Heterogeneous nuclear ribonucleoprotein H3 [Myotis davidii]
gi|440895821|gb|ELR47915.1| Heterogeneous nuclear ribonucleoprotein H3 [Bos grunniens mutus]
Length = 346
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 67/107 (62%), Gaps = 7/107 (6%)
Query: 124 MDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC 183
MDW +K G + +RL+GLP+ C KE++ +F +GLEIVPNGIT+ DY GR
Sbjct: 1 MDWVMKHNGP----NDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRS 56
Query: 184 TGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG---AQWFLSPP 227
TG A++QF KE AE AL +HKE+IGHR + + S + F PP
Sbjct: 57 TGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSSRSEIKGFYDPP 103
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K+NM RYIEL++
Sbjct: 211 IANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIELFLN 268
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF+ IVP I L D GRS+GEA V+F+S + A+ AL +HK +G RYIE++
Sbjct: 34 QFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIF 89
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKE 206
++GLP+ + D+ F L + I I D GR TG A ++FV E+A A+ + K
Sbjct: 199 MRGLPFRATENDIANFFSPLNPIRVHIDIGAD--GRATGEADVEFVTHEDAVAAMSKDKN 256
Query: 207 KIGHRLVTLVMS 218
+ HR + L ++
Sbjct: 257 NMQHRYIELFLN 268
>gi|395820622|ref|XP_003783662.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Otolemur garnettii]
Length = 346
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 67/107 (62%), Gaps = 7/107 (6%)
Query: 124 MDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC 183
MDW +K G + +RL+GLP+ C KE++ +F +GLEIVPNGIT+ DY GR
Sbjct: 1 MDWVMKHNGP----NDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRS 56
Query: 184 TGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG---AQWFLSPP 227
TG A++QF KE AE AL +HKE+IGHR + + S + F PP
Sbjct: 57 TGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSSRSEIKGFYDPP 103
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K+NM RYIEL++
Sbjct: 211 IANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIELFLN 268
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF+ IVP I L D GRS+GEA V+F+S + A+ AL +HK +G RYIE++
Sbjct: 34 QFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIF 89
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKE 206
++GLP+ + D+ F L + I I D GR TG A ++FV E+A A+ + K
Sbjct: 199 MRGLPFRATENDIANFFSPLNPIRVHIDIGAD--GRATGEADVEFVTHEDAVAAMSKDKN 256
Query: 207 KIGHRLVTLVMS 218
+ HR + L ++
Sbjct: 257 NMQHRYIELFLN 268
>gi|354477666|ref|XP_003501040.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like isoform
1 [Cricetulus griseus]
Length = 340
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 67/107 (62%), Gaps = 7/107 (6%)
Query: 124 MDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC 183
MDW +K G + +RL+GLP+ C KE++ +F +GLEIVPNGIT+ DY GR
Sbjct: 1 MDWVMKHNGP----NDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRS 56
Query: 184 TGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG---AQWFLSPP 227
TG A++QF KE AE AL +HKE+IGHR + + S + F PP
Sbjct: 57 TGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSSRSEIKGFYDPP 103
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K+NM RYIEL++
Sbjct: 211 IANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIELFLN 268
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF+ IVP I L D GRS+GEA V+F+S + A+ AL +HK +G RYIE++
Sbjct: 34 QFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIF 89
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKE 206
++GLP+ + D+ F L + I I D GR TG A ++FV E+A A+ + K
Sbjct: 199 MRGLPFRATENDIANFFSPLNPIRVHIDIGAD--GRATGEADVEFVTHEDAVAAMSKDKN 256
Query: 207 KIGHRLVTLVMS 218
+ HR + L ++
Sbjct: 257 NMQHRYIELFLN 268
>gi|62898443|dbj|BAD97161.1| heterogeneous nuclear ribonucleoprotein H3 isoform a variant [Homo
sapiens]
Length = 346
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 67/107 (62%), Gaps = 7/107 (6%)
Query: 124 MDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC 183
MDW +K G + +RL+GLP+ C KE++ +F +GLEIVPNGIT+ DY GR
Sbjct: 1 MDWVMKHNGP----NDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRS 56
Query: 184 TGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG---AQWFLSPP 227
TG A++QF KE AE AL +HKE+IGHR + + S + F PP
Sbjct: 57 TGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSSRSEIKGFYDPP 103
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K+NM RYI+L++
Sbjct: 211 IANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIKLFLN 268
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF+ IVP I L D GRS+GEA V+F+S + A+ AL +HK +G RYIE++
Sbjct: 34 QFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIF 89
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKE 206
++GLP+ + D+ F L + I I D GR TG A ++FV E+A A+ + K
Sbjct: 199 MRGLPFRATENDIANFFSPLNPIRVHIDIGAD--GRATGEADVEFVTHEDAVAAMSKDKN 256
Query: 207 KIGHRLVTLVMS 218
+ HR + L ++
Sbjct: 257 NMQHRYIKLFLN 268
>gi|330864791|ref|NP_001193508.1| heterogeneous nuclear ribonucleoprotein H3 [Bos taurus]
Length = 317
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 67/107 (62%), Gaps = 7/107 (6%)
Query: 124 MDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC 183
MDW +K G + +RL+GLP+ C KE++ +F +GLEIVPNGIT+ DY GR
Sbjct: 1 MDWVMKHNGP----NDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRS 56
Query: 184 TGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG---AQWFLSPP 227
TG A++QF KE AE AL +HKE+IGHR + + S + F PP
Sbjct: 57 TGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSSRSEIKGFYDPP 103
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF + +DA A+ R K+NM RYIEL++
Sbjct: 211 IANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSRDKNNMQHRYIELFLN 268
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF+ IVP I L D GRS+GEA V+F+S + A+ AL +HK +G RYIE++
Sbjct: 34 QFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIF 89
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKE 206
++GLP+ + D+ F L + I I D GR TG A ++FV E+A A+ R K
Sbjct: 199 MRGLPFRATENDIANFFSPLNPIRVHIDIGAD--GRATGEADVEFVTHEDAVAAMSRDKN 256
Query: 207 KIGHRLVTLVMS 218
+ HR + L ++
Sbjct: 257 NMQHRYIELFLN 268
>gi|149602744|ref|XP_001512376.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like isoform
2 [Ornithorhynchus anatinus]
Length = 332
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 67/107 (62%), Gaps = 6/107 (5%)
Query: 124 MDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC 183
MDW +K G + S +RL+GLP+ C KE++ +F GLEIVPNGIT+ DY GR
Sbjct: 1 MDWVMKHNGPNDTAS---DGTVRLRGLPFGCSKEEIVQFFTGLEIVPNGITLTMDYQGRS 57
Query: 184 TGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG---AQWFLSPP 227
TG A++QF KE AE AL +HKE+IGHR + + S + F PP
Sbjct: 58 TGEAFVQFASKEIAENALGKHKERIGHRYIEIFKSSRSEIKGFYDPP 104
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K+NM RYIEL++
Sbjct: 197 IANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIELFLN 254
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A+ AL +HK +G RYIE++
Sbjct: 35 QFFTGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIF 90
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+ ++GLP+ + D+ F L + I I D GR TG A ++FV E+A A+ +
Sbjct: 183 VHMRGLPFRATENDIANFFSPLNPIRVHIDIGAD--GRATGEADVEFVTHEDAVAAMSKD 240
Query: 205 KEKIGHRLVTLVMS 218
K + HR + L ++
Sbjct: 241 KNNMQHRYIELFLN 254
>gi|148700119|gb|EDL32066.1| mCG11326, isoform CRA_c [Mus musculus]
gi|149043913|gb|EDL97364.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) (predicted),
isoform CRA_b [Rattus norvegicus]
Length = 314
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 67/107 (62%), Gaps = 7/107 (6%)
Query: 124 MDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC 183
MDW +K G + +RL+GLP+ C KE++ +F +GLEIVPNGIT+ DY GR
Sbjct: 1 MDWVMKHNGP----NDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRS 56
Query: 184 TGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG---AQWFLSPP 227
TG A++QF KE AE AL +HKE+IGHR + + S + F PP
Sbjct: 57 TGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSSRSEIKGFYDPP 103
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF+ IVP I L D GRS+GEA V+F+S + A+ AL +HK +G RYIE++
Sbjct: 34 QFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIF 89
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNM 67
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K+NM
Sbjct: 211 IANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNM 258
>gi|119637823|ref|NP_001073293.1| heterogeneous nuclear ribonucleoprotein H3 [Mus musculus]
gi|157818423|ref|NP_001102002.1| heterogeneous nuclear ribonucleoprotein H3 [Rattus norvegicus]
gi|148700117|gb|EDL32064.1| mCG11326, isoform CRA_a [Mus musculus]
gi|149043914|gb|EDL97365.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) (predicted),
isoform CRA_c [Rattus norvegicus]
gi|182887935|gb|AAI60206.1| Heterogeneous nuclear ribonucleoprotein H3 [synthetic construct]
Length = 346
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 67/107 (62%), Gaps = 7/107 (6%)
Query: 124 MDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC 183
MDW +K G + +RL+GLP+ C KE++ +F +GLEIVPNGIT+ DY GR
Sbjct: 1 MDWVMKHNGP----NDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRS 56
Query: 184 TGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG---AQWFLSPP 227
TG A++QF KE AE AL +HKE+IGHR + + S + F PP
Sbjct: 57 TGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSSRSEIKGFYDPP 103
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K+NM RYIEL++
Sbjct: 211 IANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIELFLN 268
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF+ IVP I L D GRS+GEA V+F+S + A+ AL +HK +G RYIE++
Sbjct: 34 QFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIF 89
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKE 206
++GLP+ + D+ F L + I I D GR TG A ++FV E+A A+ + K
Sbjct: 199 MRGLPFRATENDIANFFSPLNPIRVHIDIGAD--GRATGEADVEFVTHEDAVAAMSKDKN 256
Query: 207 KIGHRLVTLVMS 218
+ HR + L ++
Sbjct: 257 NMQHRYIELFLN 268
>gi|344275081|ref|XP_003409342.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like isoform
1 [Loxodonta africana]
Length = 350
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 67/107 (62%), Gaps = 7/107 (6%)
Query: 124 MDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC 183
MDW +K G + +RL+GLP+ C KE++ +F +GLEIVPNGIT+ DY GR
Sbjct: 1 MDWVMKHNGP----NDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRS 56
Query: 184 TGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG---AQWFLSPP 227
TG A++QF KE AE AL +HKE+IGHR + + S + F PP
Sbjct: 57 TGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSSRSEIKGFYDPP 103
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K+NM RYIEL++
Sbjct: 212 IANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIELFLN 269
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF+ IVP I L D GRS+GEA V+F+S + A+ AL +HK +G RYIE++
Sbjct: 34 QFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIF 89
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKE 206
++GLP+ + D+ F L + I I D GR TG A ++FV E+A A+ + K
Sbjct: 200 MRGLPFRATENDIANFFSPLNPIRVHIDIGAD--GRATGEADVEFVTHEDAVAAMSKDKN 257
Query: 207 KIGHRLVTLVMS 218
+ HR + L ++
Sbjct: 258 NMQHRYIELFLN 269
>gi|390475715|ref|XP_003735008.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like
[Callithrix jacchus]
Length = 421
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 75/137 (54%), Gaps = 7/137 (5%)
Query: 94 GGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYE 153
G + P+ G K ++ EMDW +K G + +RL+GLP+
Sbjct: 61 GAERQVPFARGFLEDQVSEVKGAFKSNGIEMDWVMKHNGP----NDARDGTVRLRGLPFG 116
Query: 154 CKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLV 213
C KE++ +F +GLEIVPNGIT+ DY GR TG A++QF KE E AL +HKE+IGHR +
Sbjct: 117 CSKEEIVQFFQGLEIVPNGITLMMDYQGRSTGEAFVQFASKEITENALGKHKERIGHRYI 176
Query: 214 TLVMSG---AQWFLSPP 227
+ S + F PP
Sbjct: 177 EIFRSSRNEIEGFYDPP 193
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 38/57 (66%)
Query: 21 SQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K+NM +YIEL++
Sbjct: 287 ANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNMQHQYIELFLN 343
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF+ IVP I L+ D GRS+GEA V+F+S + + AL +HK +G RYIE++
Sbjct: 124 QFFQGLEIVPNGITLMMDYQGRSTGEAFVQFASKEITENALGKHKERIGHRYIEIF 179
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+ ++GLP+ + D+ F L + I I D GR TG A ++FV E+A A+ +
Sbjct: 272 VHMRGLPFRATENDIANFFSPLNPIRVHIDIGAD--GRATGEADVEFVTHEDAVAAMSKD 329
Query: 205 KEKIGHRLVTLVMS 218
K + H+ + L ++
Sbjct: 330 KNNMQHQYIELFLN 343
>gi|14141159|ref|NP_067676.2| heterogeneous nuclear ribonucleoprotein H3 isoform b [Homo sapiens]
gi|291404273|ref|XP_002718502.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like isoform
2 [Oryctolagus cuniculus]
gi|296220548|ref|XP_002756353.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 2
[Callithrix jacchus]
gi|332218215|ref|XP_003258254.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 2
[Nomascus leucogenys]
gi|332834182|ref|XP_003312632.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Pan troglodytes]
gi|338716820|ref|XP_003363523.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 2
[Equus caballus]
gi|345798943|ref|XP_860394.2| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 3
[Canis lupus familiaris]
gi|397520485|ref|XP_003830347.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 2
[Pan paniscus]
gi|402880660|ref|XP_003903916.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 2
[Papio anubis]
gi|403273869|ref|XP_003928720.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 2
[Saimiri boliviensis boliviensis]
gi|410975231|ref|XP_003994037.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 3
[Felis catus]
gi|426364934|ref|XP_004049546.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 2
[Gorilla gorilla gorilla]
gi|7739443|gb|AAF68849.1|AF132361_1 hnRNP 2H9A [Homo sapiens]
gi|7739440|gb|AAF68847.1| hnRNP 2H9A [Homo sapiens]
gi|24981041|gb|AAH39824.1| Heterogeneous nuclear ribonucleoprotein H3 (2H9) [Homo sapiens]
gi|119574667|gb|EAW54282.1| heterogeneous nuclear ribonucleoprotein H3 (2H9), isoform CRA_c
[Homo sapiens]
gi|158256526|dbj|BAF84236.1| unnamed protein product [Homo sapiens]
gi|261861160|dbj|BAI47102.1| heterogeneous nuclear ribonucleoprotein H3 [synthetic construct]
gi|296472170|tpg|DAA14285.1| TPA: heterogeneous nuclear ribonucleoprotein H3 (2H9) [Bos taurus]
gi|380812320|gb|AFE78034.1| heterogeneous nuclear ribonucleoprotein H3 isoform b [Macaca
mulatta]
gi|410221432|gb|JAA07935.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Pan troglodytes]
gi|410258986|gb|JAA17459.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Pan troglodytes]
gi|410302444|gb|JAA29822.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Pan troglodytes]
gi|410342071|gb|JAA39982.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Pan troglodytes]
Length = 331
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 67/107 (62%), Gaps = 7/107 (6%)
Query: 124 MDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC 183
MDW +K G + +RL+GLP+ C KE++ +F +GLEIVPNGIT+ DY GR
Sbjct: 1 MDWVMKHNGP----NDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRS 56
Query: 184 TGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG---AQWFLSPP 227
TG A++QF KE AE AL +HKE+IGHR + + S + F PP
Sbjct: 57 TGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSSRSEIKGFYDPP 103
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K+NM RYIEL++
Sbjct: 196 IANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIELFLN 253
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF+ IVP I L D GRS+GEA V+F+S + A+ AL +HK +G RYIE++
Sbjct: 34 QFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIF 89
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+ ++GLP+ + D+ F L + I I D GR TG A ++FV E+A A+ +
Sbjct: 182 VHMRGLPFRATENDIANFFSPLNPIRVHIDIGAD--GRATGEADVEFVTHEDAVAAMSKD 239
Query: 205 KEKIGHRLVTLVMS 218
K + HR + L ++
Sbjct: 240 KNNMQHRYIELFLN 253
>gi|395820624|ref|XP_003783663.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 2
[Otolemur garnettii]
Length = 331
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 67/107 (62%), Gaps = 7/107 (6%)
Query: 124 MDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC 183
MDW +K G + +RL+GLP+ C KE++ +F +GLEIVPNGIT+ DY GR
Sbjct: 1 MDWVMKHNGP----NDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRS 56
Query: 184 TGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG---AQWFLSPP 227
TG A++QF KE AE AL +HKE+IGHR + + S + F PP
Sbjct: 57 TGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSSRSEIKGFYDPP 103
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K+NM RYIEL++
Sbjct: 196 IANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIELFLN 253
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF+ IVP I L D GRS+GEA V+F+S + A+ AL +HK +G RYIE++
Sbjct: 34 QFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIF 89
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+ ++GLP+ + D+ F L + I I D GR TG A ++FV E+A A+ +
Sbjct: 182 VHMRGLPFRATENDIANFFSPLNPIRVHIDIGAD--GRATGEADVEFVTHEDAVAAMSKD 239
Query: 205 KEKIGHRLVTLVMS 218
K + HR + L ++
Sbjct: 240 KNNMQHRYIELFLN 253
>gi|354477668|ref|XP_003501041.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like isoform
2 [Cricetulus griseus]
gi|344247616|gb|EGW03720.1| Heterogeneous nuclear ribonucleoprotein H3 [Cricetulus griseus]
Length = 325
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 67/107 (62%), Gaps = 7/107 (6%)
Query: 124 MDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC 183
MDW +K G + +RL+GLP+ C KE++ +F +GLEIVPNGIT+ DY GR
Sbjct: 1 MDWVMKHNGP----NDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRS 56
Query: 184 TGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG---AQWFLSPP 227
TG A++QF KE AE AL +HKE+IGHR + + S + F PP
Sbjct: 57 TGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSSRSEIKGFYDPP 103
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K+NM RYIEL++
Sbjct: 196 IANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIELFLN 253
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF+ IVP I L D GRS+GEA V+F+S + A+ AL +HK +G RYIE++
Sbjct: 34 QFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIF 89
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+ ++GLP+ + D+ F L + I I D GR TG A ++FV E+A A+ +
Sbjct: 182 VHMRGLPFRATENDIANFFSPLNPIRVHIDIGAD--GRATGEADVEFVTHEDAVAAMSKD 239
Query: 205 KEKIGHRLVTLVMS 218
K + HR + L ++
Sbjct: 240 KNNMQHRYIELFLN 253
>gi|392355325|ref|XP_003752006.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like [Rattus
norvegicus]
gi|148700118|gb|EDL32065.1| mCG11326, isoform CRA_b [Mus musculus]
gi|149043912|gb|EDL97363.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) (predicted),
isoform CRA_a [Rattus norvegicus]
Length = 331
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 67/107 (62%), Gaps = 7/107 (6%)
Query: 124 MDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC 183
MDW +K G + +RL+GLP+ C KE++ +F +GLEIVPNGIT+ DY GR
Sbjct: 1 MDWVMKHNGP----NDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRS 56
Query: 184 TGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG---AQWFLSPP 227
TG A++QF KE AE AL +HKE+IGHR + + S + F PP
Sbjct: 57 TGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSSRSEIKGFYDPP 103
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K+NM RYIEL++
Sbjct: 196 IANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIELFLN 253
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF+ IVP I L D GRS+GEA V+F+S + A+ AL +HK +G RYIE++
Sbjct: 34 QFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIF 89
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+ ++GLP+ + D+ F L + I I D GR TG A ++FV E+A A+ +
Sbjct: 182 VHMRGLPFRATENDIANFFSPLNPIRVHIDIGAD--GRATGEADVEFVTHEDAVAAMSKD 239
Query: 205 KEKIGHRLVTLVMS 218
K + HR + L ++
Sbjct: 240 KNNMQHRYIELFLN 253
>gi|344275083|ref|XP_003409343.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like isoform
2 [Loxodonta africana]
Length = 335
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 67/107 (62%), Gaps = 7/107 (6%)
Query: 124 MDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC 183
MDW +K G + +RL+GLP+ C KE++ +F +GLEIVPNGIT+ DY GR
Sbjct: 1 MDWVMKHNGP----NDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRS 56
Query: 184 TGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG---AQWFLSPP 227
TG A++QF KE AE AL +HKE+IGHR + + S + F PP
Sbjct: 57 TGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSSRSEIKGFYDPP 103
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K+NM RYIEL++
Sbjct: 197 IANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIELFLN 254
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF+ IVP I L D GRS+GEA V+F+S + A+ AL +HK +G RYIE++
Sbjct: 34 QFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIF 89
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+ ++GLP+ + D+ F L + I I D GR TG A ++FV E+A A+ +
Sbjct: 183 VHMRGLPFRATENDIANFFSPLNPIRVHIDIGAD--GRATGEADVEFVTHEDAVAAMSKD 240
Query: 205 KEKIGHRLVTLVMS 218
K + HR + L ++
Sbjct: 241 KNNMQHRYIELFLN 254
>gi|149043915|gb|EDL97366.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) (predicted),
isoform CRA_d [Rattus norvegicus]
Length = 186
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 67/107 (62%), Gaps = 7/107 (6%)
Query: 124 MDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC 183
MDW +K G + +RL+GLP+ C KE++ +F +GLEIVPNGIT+ DY GR
Sbjct: 1 MDWVMKHNGP----NDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRS 56
Query: 184 TGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG---AQWFLSPP 227
TG A++QF KE AE AL +HKE+IGHR + + S + F PP
Sbjct: 57 TGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSSRSEIKGFYDPP 103
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF+ IVP I L D GRS+GEA V+F+S + A+ AL +HK +G RYIE++
Sbjct: 34 QFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIF 89
>gi|168037998|ref|XP_001771489.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677216|gb|EDQ63689.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 527
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 14/206 (6%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME- 77
+ FFK +V I L T GR +GEA VEF + + A RA+Q H+ MG RY+EL+
Sbjct: 161 TAFFKGMQVVADGIFLCTHADGRPTGEAFVEFVNEETAARAMQLHREPMGSRYVELFRST 220
Query: 78 EGTSSKEANGR------GTGGFG--GVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALK 129
+G R G GGF GV P +G F + + + + +
Sbjct: 221 KGEMMTAVQQRMYGMFSGAGGFSQFGVGQIPGMMGAFGVQGLTGMNLAAVQAAGLGSMTV 280
Query: 130 RQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYI 189
QG LS ++ + C++++GLPY + ++ F EG +PNGI I R TG A++
Sbjct: 281 PQG--LSDTS-EHVCIKMRGLPYNAGQREIMDFFEGYSFLPNGIHIVMGATDRPTGEAFV 337
Query: 190 QFVDKENAEKALLRHKEKIGHRLVTL 215
+F+ + A++A+ RH++ IG R + L
Sbjct: 338 EFMSSDEAQRAMERHRQNIGSRYIEL 363
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 106/207 (51%), Gaps = 34/207 (16%)
Query: 21 SQFFKPIV--PVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
+ FFK + P +++ + GRS+G+A V+F+S + A +AL+R++ ++G RYIE++
Sbjct: 38 ADFFKGLEMGPDGVVICVNFQGRSTGQAYVQFASAELANKALERNRQHIGSRYIEVFKGH 97
Query: 79 GTSSKEA---NGRGTGGFGGVKSTPYG----VGIFCISQFLAKWMRRAKRSEMDWALKRQ 131
+ A GRG+G G + G GI +S + ++
Sbjct: 98 PADMQGALRMVGRGSGVVSGSGAVASGGILNTGIPGMSG--------------NPDMRYT 143
Query: 132 GAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQF 191
G V R++G+PY C D+ F +G+++V +GI + GR TG A+++F
Sbjct: 144 GVV-----------RMRGMPYSCTSADITAFFKGMQVVADGIFLCTHADGRPTGEAFVEF 192
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMS 218
V++E A +A+ H+E +G R V L S
Sbjct: 193 VNEETAARAMQLHREPMGSRYVELFRS 219
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Query: 132 GAVLSGSAVD-----QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGV 186
G ++ GSA+D +RL+GLP+ + D+ F +GLE+ P+G+ I ++ GR TG
Sbjct: 5 GGLVGGSALDDELKRSNVVRLRGLPFSATESDIADFFKGLEMGPDGVVICVNFQGRSTGQ 64
Query: 187 AYIQFVDKENAEKALLRHKEKIGHRLV 213
AY+QF E A KAL R+++ IG R +
Sbjct: 65 AYVQFASAELANKALERNRQHIGSRYI 91
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 23 FFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
FF+ +P I ++ R +GEA VEF S D+AQRA++RH+ N+G RYIEL+
Sbjct: 310 FFEGYSFLPNGIHIVMGATDRPTGEAFVEFMSSDEAQRAMERHRQNIGSRYIELF 364
>gi|395521342|ref|XP_003764777.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2-like
[Sarcophilus harrisii]
Length = 465
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 92/189 (48%), Gaps = 43/189 (22%)
Query: 30 VNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRG 89
I + GR SGEA VE S ++ + AL++HK M RY+E++ G
Sbjct: 40 AGIHFMYTREGRPSGEAFVELESEEEIELALKKHKETMAHRYVEVFRSNGV--------- 90
Query: 90 TGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQG 149
EMDW LKR A D +RL+G
Sbjct: 91 ---------------------------------EMDWTLKRTAPSSPDPAGD-GYVRLRG 116
Query: 150 LPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIG 209
LP+ C KED+ +F GLEI+PNGI + D+ G+ +G A++QF +E AEKAL +HKEK+G
Sbjct: 117 LPFNCNKEDIVEFFSGLEIMPNGIMLQVDFRGKNSGEAFVQFASQEIAEKALKKHKEKMG 176
Query: 210 HRLVTLVMS 218
HR + + S
Sbjct: 177 HRYIEIFKS 185
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 110/264 (41%), Gaps = 49/264 (18%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE- 78
+FF I+P I+L D G++SGEA V+F+S + A++AL++HK MG RYIE++
Sbjct: 128 EFFSGLEIMPNGIMLQVDFRGKNSGEAFVQFASQEIAEKALKKHKEKMGHRYIEIFKSSQ 187
Query: 79 -------------------GTSSKEANGRGTGGFG---GVKSTPYGVGIFCISQFLAKWM 116
G + GR G G G++ YG + +
Sbjct: 188 AEVHTHYDLPQKKRVRQRPGPYDRPPTGRYYGSLGRGAGLEGMRYGA-----HEIMYGGY 242
Query: 117 RRAKRSEMDWALKRQ---------GAVLSGSAVDQC----CMRLQGLPYECKKEDVEKFL 163
D+ R + SG + Q + ++GLPY+ ++D+ F
Sbjct: 243 EDYVGYSNDYHFGRDPRYFLAVSGDSYGSGWSTFQSPAGHFVHMRGLPYKATEKDIYDFF 302
Query: 164 EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTL----VMSG 219
L+ V I + D GR TG A ++F E+A A+ + K + HR + L V +
Sbjct: 303 SPLKPVGAYIEVGAD--GRVTGEADVEFATHEDAVAAMSKDKANMQHRYIELFLNSVAAA 360
Query: 220 AQWFLSPPLTNETPISRLDLTGSP 243
P + +S L GSP
Sbjct: 361 DSGVYDPLMMGGMGLSNLPGYGSP 384
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQF 191
+LS A + ++++GLP+ C DV+ F G I GI + GR +G A+++
Sbjct: 1 MLSVEAEGRFVVKVRGLPWSCSASDVQNFFSGCRIRNGVAGIHFMYTREGRPSGEAFVEL 60
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMS 218
+E E AL +HKE + HR V + S
Sbjct: 61 ESEEEIELALKKHKETMAHRYVEVFRS 87
>gi|326923399|ref|XP_003207924.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like
[Meleagris gallopavo]
Length = 323
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 65/95 (68%), Gaps = 2/95 (2%)
Query: 124 MDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC 183
MDW+ K G + + D +RL+GLP+ C KE++ +F +GLEIVPNGIT+ DY GR
Sbjct: 1 MDWSGKHNGP--TDTTNDGTVVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTLDYQGRS 58
Query: 184 TGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
TG A++QF KE AE AL +HKE+IGHR + + S
Sbjct: 59 TGEAFVQFASKEIAENALGKHKERIGHRYIEIFKS 93
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K++M RYIEL++
Sbjct: 195 IANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNHMQHRYIELFLN 252
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF+ IVP I L D GRS+GEA V+F+S + A+ AL +HK +G RYIE++
Sbjct: 36 QFFQGLEIVPNGITLTLDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIF 91
>gi|224052108|ref|XP_002190951.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 2
[Taeniopygia guttata]
Length = 327
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 65/95 (68%), Gaps = 2/95 (2%)
Query: 124 MDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC 183
MDW+ K G + + D +RL+GLP+ C KE++ +F +GLEIVPNGIT+ DY GR
Sbjct: 1 MDWSGKHNGP--NDTTNDGTVVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTLDYQGRS 58
Query: 184 TGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
TG A++QF KE AE AL +HKE+IGHR + + S
Sbjct: 59 TGEAFVQFASKEIAENALGKHKERIGHRYIEIFKS 93
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K++M RYIEL++
Sbjct: 199 IANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNHMQHRYIELFLN 256
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF+ IVP I L D GRS+GEA V+F+S + A+ AL +HK +G RYIE++
Sbjct: 36 QFFQGLEIVPNGITLTLDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIF 91
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+ ++GLP+ + D+ F L + I I D GR TG A ++FV E+A A+ +
Sbjct: 185 VHMRGLPFRATENDIANFFSPLNPIRVHIDIGAD--GRATGEADVEFVTHEDAVAAMSKD 242
Query: 205 KEKIGHRLVTLVMS 218
K + HR + L ++
Sbjct: 243 KNHMQHRYIELFLN 256
>gi|395741721|ref|XP_003780739.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein H3 [Pongo abelii]
Length = 346
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 67/107 (62%), Gaps = 7/107 (6%)
Query: 124 MDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC 183
MDW +K G + +RL+GLP+ C KE++ +F +GLEIVPNGIT+ DY GR
Sbjct: 1 MDWVMKHNGP----NDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRS 56
Query: 184 TGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG---AQWFLSPP 227
TG A++QF KE AE AL +HKE+IGHR + + S + F PP
Sbjct: 57 TGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSSRSEIKGFYDPP 103
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF+ IVP I L D GRS+GEA V+F+S + A+ AL +HK +G RYIE++
Sbjct: 34 QFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIF 89
Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRAL-QRHKSNMGDRYIELYM 76
+ FF P+ + + GR++GEADVEF + +DA A+ R K NM RYIEL++
Sbjct: 219 IANFFSPLNQYEVHIDIGADGRATGEADVEFVTHEDAVAAMFXRIKINMQHRYIELFL 276
>gi|224052106|ref|XP_002190890.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Taeniopygia guttata]
Length = 342
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 65/95 (68%), Gaps = 2/95 (2%)
Query: 124 MDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC 183
MDW+ K G + + D +RL+GLP+ C KE++ +F +GLEIVPNGIT+ DY GR
Sbjct: 1 MDWSGKHNGP--NDTTNDGTVVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTLDYQGRS 58
Query: 184 TGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
TG A++QF KE AE AL +HKE+IGHR + + S
Sbjct: 59 TGEAFVQFASKEIAENALGKHKERIGHRYIEIFKS 93
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K++M RYIEL++
Sbjct: 214 IANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNHMQHRYIELFLN 271
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF+ IVP I L D GRS+GEA V+F+S + A+ AL +HK +G RYIE++
Sbjct: 36 QFFQGLEIVPNGITLTLDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIF 91
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKE 206
++GLP+ + D+ F L + I I D GR TG A ++FV E+A A+ + K
Sbjct: 202 MRGLPFRATENDIANFFSPLNPIRVHIDIGAD--GRATGEADVEFVTHEDAVAAMSKDKN 259
Query: 207 KIGHRLVTLVMS 218
+ HR + L ++
Sbjct: 260 HMQHRYIELFLN 271
>gi|148700120|gb|EDL32067.1| mCG11326, isoform CRA_d [Mus musculus]
Length = 186
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 67/107 (62%), Gaps = 7/107 (6%)
Query: 124 MDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC 183
MDW +K G + +RL+GLP+ C KE++ +F +GLEIVPNGIT+ DY GR
Sbjct: 1 MDWVMKHNGP----NDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRS 56
Query: 184 TGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG---AQWFLSPP 227
TG A++QF KE AE AL +HKE+IGHR + + S + F PP
Sbjct: 57 TGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSSRSEIKGFYDPP 103
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF+ IVP I L D GRS+GEA V+F+S + A+ AL +HK +G RYIE++
Sbjct: 34 QFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIF 89
>gi|60302824|ref|NP_001012610.1| heterogeneous nuclear ribonucleoprotein H3 [Gallus gallus]
gi|60099043|emb|CAH65352.1| hypothetical protein RCJMB04_21b18 [Gallus gallus]
Length = 342
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 64/95 (67%), Gaps = 2/95 (2%)
Query: 124 MDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC 183
MDW K G + + D +RL+GLP+ C KE++ +F +GLEIVPNGIT+ DY GR
Sbjct: 1 MDWTGKHNGP--TDTTNDGTVVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTLDYQGRS 58
Query: 184 TGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
TG A++QF KE AE AL +HKE+IGHR + + S
Sbjct: 59 TGEAFVQFASKEIAENALGKHKERIGHRYIEIFKS 93
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K++M RYIEL++
Sbjct: 214 IANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNHMQHRYIELFLN 271
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF+ IVP I L D GRS+GEA V+F+S + A+ AL +HK +G RYIE++
Sbjct: 36 QFFQGLEIVPNGITLTLDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIF 91
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKE 206
++GLP+ + D+ F L + I I D GR TG A ++FV E+A A+ + K
Sbjct: 202 MRGLPFRATENDIANFFSPLNPIRVHIDIGAD--GRATGEADVEFVTHEDAVAAMSKDKN 259
Query: 207 KIGHRLVTLVMS 218
+ HR + L ++
Sbjct: 260 HMQHRYIELFLN 271
>gi|449269002|gb|EMC79814.1| Heterogeneous nuclear ribonucleoprotein H3 [Columba livia]
Length = 343
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 64/95 (67%), Gaps = 2/95 (2%)
Query: 124 MDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC 183
MDW K G + + D +RL+GLP+ C KE++ +F +GLEIVPNGIT+ DY GR
Sbjct: 1 MDWTGKHNGP--NDTTNDGTVVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTLDYQGRS 58
Query: 184 TGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
TG A++QF KE AE AL +HKE+IGHR + + S
Sbjct: 59 TGEAFVQFASKEIAENALGKHKERIGHRYIEIFKS 93
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K++M RYIEL++
Sbjct: 215 IANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNHMQHRYIELFLN 272
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF+ IVP I L D GRS+GEA V+F+S + A+ AL +HK +G RYIE++
Sbjct: 36 QFFQGLEIVPNGITLTLDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIF 91
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKE 206
++GLP+ + D+ F L + I I D GR TG A ++FV E+A A+ + K
Sbjct: 203 MRGLPFRATENDIANFFSPLNPIRVHIDIGAD--GRATGEADVEFVTHEDAVAAMSKDKN 260
Query: 207 KIGHRLVTLVMS 218
+ HR + L ++
Sbjct: 261 HMQHRYIELFLN 272
>gi|47218706|emb|CAG05678.1| unnamed protein product [Tetraodon nigroviridis]
Length = 488
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 67/109 (61%), Gaps = 15/109 (13%)
Query: 124 MDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKF--------------LEGLEIV 169
MDW LKR G S C +RL+GLP+ C KE++ +F +EGL IV
Sbjct: 1 MDWVLKRSGPADYDS-CSGCTLRLRGLPFGCSKEEIVQFFSVSIPTSVSMCAWVEGLRIV 59
Query: 170 PNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
PNGIT+P DY GR TG A++QF KE AEKAL +HKE+IGHR + + S
Sbjct: 60 PNGITLPVDYQGRSTGEAFVQFASKEIAEKALGKHKERIGHRYIEIFKS 108
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 5 FYVIDILIHITYCLLCSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHK 64
F+ + I ++ C IVP I L D GRS+GEA V+F+S + A++AL +HK
Sbjct: 38 FFSVSIPTSVSMCAWVEGL--RIVPNGITLPVDYQGRSTGEAFVQFASKEIAEKALGKHK 95
Query: 65 SNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKSTPY 101
+G RYIE++ + G GG + PY
Sbjct: 96 ERIGHRYIEIFKSSRNEIRAYYELPRRGMGGQRPGPY 132
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 21 SQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNM 67
++FF P+ P+ + + G+S+GEADVEF S +DA A+ + K++M
Sbjct: 377 AKFFSPLNPLRVHIDFAPNGKSTGEADVEFRSHEDAVAAMSKDKNHM 423
>gi|119574668|gb|EAW54283.1| heterogeneous nuclear ribonucleoprotein H3 (2H9), isoform CRA_d
[Homo sapiens]
Length = 149
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 67/107 (62%), Gaps = 7/107 (6%)
Query: 124 MDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC 183
MDW +K G + +RL+GLP+ C KE++ +F +GLEIVPNGIT+ DY GR
Sbjct: 1 MDWVMKHNGP----NDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRS 56
Query: 184 TGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG---AQWFLSPP 227
TG A++QF KE AE AL +HKE+IGHR + + S + F PP
Sbjct: 57 TGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSSRSEIKGFYDPP 103
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF+ IVP I L D GRS+GEA V+F+S + A+ AL +HK +G RYIE++
Sbjct: 34 QFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIF 89
>gi|426255652|ref|XP_004021462.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 1
[Ovis aries]
Length = 346
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 66/107 (61%), Gaps = 7/107 (6%)
Query: 124 MDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC 183
MDW +K G + +RL+GLP+ C KE++ +F +GLEIVPNGIT+ DY GR
Sbjct: 1 MDWVMKHNGP----NDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRS 56
Query: 184 TGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG---AQWFLSPP 227
TG A++QF E AE AL +HKE+IGHR + + S + F PP
Sbjct: 57 TGEAFVQFASMEIAENALGKHKERIGHRYIEIFRSSRSEIKGFYDPP 103
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K+NM RYIEL++
Sbjct: 211 IANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIELFLN 268
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF+ IVP I L D GRS+GEA V+F+S++ A+ AL +HK +G RYIE++
Sbjct: 34 QFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASMEIAENALGKHKERIGHRYIEIF 89
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKE 206
++GLP+ + D+ F L + I I D GR TG A ++FV E+A A+ + K
Sbjct: 199 MRGLPFRATENDIANFFSPLNPIRVHIDIGAD--GRATGEADVEFVTHEDAVAAMSKDKN 256
Query: 207 KIGHRLVTLVMS 218
+ HR + L ++
Sbjct: 257 NMQHRYIELFLN 268
>gi|74202595|dbj|BAE24862.1| unnamed protein product [Mus musculus]
Length = 171
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 83/164 (50%), Gaps = 43/164 (26%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 51 GRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF------------------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ EMDW LK G +A D +RL+GLP+ C KE++
Sbjct: 87 ------------------KSNSVEMDWVLKHTGPNSPDTAND-GFVRLRGLPFGCSKEEI 127
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+F GLEIVPNG+T+P D+ GR TG A++QF +E AEKAL +
Sbjct: 128 VQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKK 171
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQF 191
+LS + ++++GLP+ C E+V +F +I +G+ + GR +G A+++
Sbjct: 2 MLSTEGREGFVVKVRGLPWSCSAEEVMRFFSDCKIQNGTSGVRFIYTREGRPSGEAFVEL 61
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA---QWFL------SPPLTNE 231
++ + AL + +E +GHR V + S + W L SP N+
Sbjct: 62 ESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHTGPNSPDTAND 110
>gi|426255654|ref|XP_004021463.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform 2
[Ovis aries]
Length = 331
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 66/107 (61%), Gaps = 7/107 (6%)
Query: 124 MDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC 183
MDW +K G + +RL+GLP+ C KE++ +F +GLEIVPNGIT+ DY GR
Sbjct: 1 MDWVMKHNGP----NDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRS 56
Query: 184 TGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG---AQWFLSPP 227
TG A++QF E AE AL +HKE+IGHR + + S + F PP
Sbjct: 57 TGEAFVQFASMEIAENALGKHKERIGHRYIEIFRSSRSEIKGFYDPP 103
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K+NM RYIEL++
Sbjct: 196 IANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIELFLN 253
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF+ IVP I L D GRS+GEA V+F+S++ A+ AL +HK +G RYIE++
Sbjct: 34 QFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASMEIAENALGKHKERIGHRYIEIF 89
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+ ++GLP+ + D+ F L + I I D GR TG A ++FV E+A A+ +
Sbjct: 182 VHMRGLPFRATENDIANFFSPLNPIRVHIDIGAD--GRATGEADVEFVTHEDAVAAMSKD 239
Query: 205 KEKIGHRLVTLVMS 218
K + HR + L ++
Sbjct: 240 KNNMQHRYIELFLN 253
>gi|449685013|ref|XP_002164898.2| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Hydra
magnipapillata]
Length = 365
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 69/103 (66%), Gaps = 5/103 (4%)
Query: 116 MRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITI 175
++ AK+SEM+W + R S + +RL+GLP++C K D+ +F GL+I P GITI
Sbjct: 8 VKEAKQSEMEWVVNRMDNSRS-----EAIVRLRGLPFDCTKHDIAEFFSGLDISPYGITI 62
Query: 176 PHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+ GR +G AY++FV +++AE ALL+HKEKIGHR + + S
Sbjct: 63 TMNQDGRASGDAYVEFVTQQDAENALLKHKEKIGHRYIEIFQS 105
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 94/231 (40%), Gaps = 43/231 (18%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FF I P I + + GR+SG+A VEF + DA+ AL +HK +G RYIE++
Sbjct: 47 AEFFSGLDISPYGITITMNQDGRASGDAYVEFVTQQDAENALLKHKEKIGHRYIEIFQSS 106
Query: 79 --------GTSSKEA------------------NG--RGTGGF----GGVKSTPYGVGIF 106
GT S + NG RG GG G + P G F
Sbjct: 107 KDDIKYVVGTRSDDHRPSLMSIRPGPYDRPQNFNGPRRGRGGVQLGPSGFNTAPSYSGDF 166
Query: 107 CISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGL 166
++ + + + V S MR GLP+E D+ F L
Sbjct: 167 GRNRSM-----NRGGRSGGMGMSKTPTVQSSKTGHSVHMR--GLPFEASVSDIVTFFSPL 219
Query: 167 EIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVM 217
P + + + GR G + F +AE A+L+ K+ +GHR + L +
Sbjct: 220 N--PVDVRLMFEPNGRPKGECDVDFATHSDAESAMLKDKQNMGHRYIELFL 268
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF P+ PV++ L+ + GR GE DV+F++ DA+ A+ + K NMG RYIEL+++ SS
Sbjct: 215 FFSPLNPVDVRLMFEPNGRPKGECDVDFATHSDAESAMLKDKQNMGHRYIELFLK---SS 271
Query: 83 KEANG 87
A+G
Sbjct: 272 PNASG 276
>gi|410041428|ref|XP_003950996.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein H2-like [Pan troglodytes]
Length = 442
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 95/207 (45%), Gaps = 50/207 (24%)
Query: 9 DILIHITYCLLCSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMG 68
D ++H + C + + I + GR SGEA VE S D+A+ A + + MG
Sbjct: 24 DEVMHFSDCKIQNG------TSGICFIYTGEGRPSGEAFVELESADEAKLA-XKDRETMG 76
Query: 69 DRYIELYMEEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWAL 128
RY+E++ ++ EMDW
Sbjct: 77 HRYVEVF------------------------------------------KSNSVEMDWVS 94
Query: 129 KRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAY 188
K G +A D L+GLP+ C KE++ F GLEIVPNGIT+ D+ GR TG A+
Sbjct: 95 KHTGLNSPDTANDGFVW-LRGLPFGCXKEEIVHFFSGLEIVPNGITLXVDFQGRSTGEAF 153
Query: 189 IQFVDKENAEKALLRHKEKIGHRLVTL 215
+Q +E AE AL +H+E+IGHR + +
Sbjct: 154 VQLASQEIAEMALKKHRERIGHRYIEI 180
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
IVP I L D GRS+GEA V+ +S + A+ AL++H+ +G RYIE++
Sbjct: 133 IVPNGITLXVDFQGRSTGEAFVQLASQEIAEMALKKHRERIGHRYIEIF 181
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 25/136 (18%)
Query: 22 QFFKPI--VPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
F+ P+ + V+I + DD R +G ADVEF++ +DA A+ + K+NM RY+E+++
Sbjct: 303 NFYSPLNLMRVHIEIGHDD--RVTGRADVEFAAHEDAVAAMAKDKANMQHRYMEIFL--- 357
Query: 80 TSSKEANGRGTGGFGGVKSTPYG------VGIFCISQFLAKWMRRAKRSEMDWALKRQGA 133
N GT G G YG +G+ S + A+W +S M Q +
Sbjct: 358 ------NAVGTTGASG---GAYGRQMMGEMGLPNQSSYAAEWWLWRGQSSMSGGYGGQSS 408
Query: 134 VL---SGSAVDQCCMR 146
V G DQ MR
Sbjct: 409 VTGGYGGGXGDQSSMR 424
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ +GLPY K + F L ++ I I HD R TG A ++F E+A A+ +
Sbjct: 287 CVHTRGLPYRATK-NXYNFYSPLNLMRVHIEIGHD--DRVTGRADVEFAAHEDAVAAMAK 343
Query: 204 HKEKIGHRLVTLVMS 218
K + HR + + ++
Sbjct: 344 DKANMQHRYMEIFLN 358
>gi|148233462|ref|NP_001087973.1| heterogeneous nuclear ribonucleoprotein H3 (2H9) [Xenopus laevis]
gi|52138903|gb|AAH82630.1| LOC494658 protein [Xenopus laevis]
Length = 342
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
Query: 118 RAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPH 177
++ +EM+W LK + D +RL+GLP+ C KE++ +F GL IVPNGIT+
Sbjct: 10 KSNNTEMEWVLKHNSTDDVETDSD-GTVRLRGLPFGCSKEEIVQFFSGLRIVPNGITLTV 68
Query: 178 DYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
DY GR TG A++QF KE AE AL +HKE+IGHR + + S
Sbjct: 69 DYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFKS 109
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%)
Query: 21 SQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF++ +DA A+ + K+NM RYIEL++
Sbjct: 228 ANFFSPLTPIRVHIDVGADGRATGEADVEFATHEDAVAAMSKDKNNMQHRYIELFLN 284
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 QFFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A+ AL +HK +G RYIE++
Sbjct: 52 QFFSGLRIVPNGITLTVDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIF 107
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+ ++GLP+ + D+ F L + I + D GR TG A ++F E+A A+ +
Sbjct: 213 VHMRGLPFRASESDIANFFSPLTPIRVHIDVGAD--GRATGEADVEFATHEDAVAAMSKD 270
Query: 205 KEKIGHRLVTLVMS 218
K + HR + L ++
Sbjct: 271 KNNMQHRYIELFLN 284
>gi|226487870|emb|CAX75600.1| Heterogeneous nuclear ribonucleoprotein H' [Schistosoma japonicum]
Length = 278
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 89/187 (47%), Gaps = 44/187 (23%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I GRS+GEA +E S DD ++A+ H +MG RYIE++ + S+E N
Sbjct: 35 IYFPQGPNGRSNGEAFIELDSKDDKEKAMAHHNEHMGRRYIEVF---DSCSEELNN---- 87
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+ S P+ S + +RL+GLP
Sbjct: 88 ---AMGSRPF----------------------------------SSPNRREHVVRLRGLP 110
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
Y+ +K+++ F GLEI PNGI + D+ GRCTG AY+QF E+ +A +H EKIGHR
Sbjct: 111 YDTEKKEIYAFFNGLEIAPNGIGLLVDHMGRCTGEAYVQFTSSESLARAKEKHMEKIGHR 170
Query: 212 LVTLVMS 218
+ + S
Sbjct: 171 YIEIFES 177
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 11/94 (11%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+R++GLP+ +D+ F + I GI P GR G A+I+ K++ EKA+
Sbjct: 4 VVRIRGLPFSANADDIINFFKDCTIRGGKRGIYFPQGPNGRSNGEAFIELDSKDDKEKAM 63
Query: 202 LRHKEKIGHRLVTLVMS---------GAQWFLSP 226
H E +G R + + S G++ F SP
Sbjct: 64 AHHNEHMGRRYIEVFDSCSEELNNAMGSRPFSSP 97
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
I P I LL D GR +GEA V+F+S + RA ++H +G RYIE++
Sbjct: 127 IAPNGIGLLVDHMGRCTGEAYVQFTSSESLARAKEKHMEKIGHRYIEIF 175
>gi|357613158|gb|EHJ68351.1| putative Heterogeneous nuclear ribonucleoprotein H [Danaus
plexippus]
Length = 343
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 91/188 (48%), Gaps = 48/188 (25%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGE VE S DD AL++ K N+G RYIE++ +
Sbjct: 49 GRPSGECFVEVQSQDDVTHALKKDKENIGRRYIEVFSTD--------------------- 87
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALK--RQGA----VLSGSAVDQCCMRLQGLPYE 153
R +M+WAL RQ V+ + D ++L+GLP+
Sbjct: 88 ---------------------RQDMEWALNAMRQSENGFDVIPNVSDDFGIVKLRGLPFG 126
Query: 154 CKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLV 213
C KE++ +F GL +V +G+ + D+ GR +G A++ FVDK++A AL R EKIGHR +
Sbjct: 127 CSKEEIIQFFNGLSVVQDGVHLLSDHTGRASGEAFVYFVDKQSARDALDRDMEKIGHRYI 186
Query: 214 TLVMSGAQ 221
+ +S A
Sbjct: 187 EVFLSSAD 194
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 100/210 (47%), Gaps = 11/210 (5%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
QFF +V + LL+D GR+SGEA V F A+ AL R +G RYIE+++
Sbjct: 134 QFFNGLSVVQDGVHLLSDHTGRASGEAFVYFVDKQSARDALDRDMEKIGHRYIEVFLSSA 193
Query: 80 TSSKEANGR-GTGGFG--GVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
+ R GGF G + TPY +F + R + +G L
Sbjct: 194 DKVRAYGARLEGGGFKSRGYRPTPYDRNDRLSGRFGGRGRGSFARGGSGGSYTGRGGRLG 253
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
S C+ ++GLP++ +D+ F + I P I I +D +GR +G A ++F E+
Sbjct: 254 SSH----CVHMRGLPFKATPQDIAYFFK--PIRPLNINIHYDNSGRPSGEADVEFECHED 307
Query: 197 AEKALLRHKEKIGHRLVTLVMSGAQWFLSP 226
A +A+ R K + HR + L M+ + F SP
Sbjct: 308 AMRAMRRDKNNMEHRYIELFMNSSPTFKSP 337
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDK 194
GS ++L+GLP+ EDV FL G+ ++ + G+ + GR +G +++ +
Sbjct: 3 GSGDGSYIIKLRGLPFSTTAEDVLTFLSGVNVINDKEGVHLTEVRPGRPSGECFVEVQSQ 62
Query: 195 ENAEKALLRHKEKIGHRLVTLVMSGAQ---WFLS 225
++ AL + KE IG R + + + Q W L+
Sbjct: 63 DDVTHALKKDKENIGRRYIEVFSTDRQDMEWALN 96
>gi|302794117|ref|XP_002978823.1| hypothetical protein SELMODRAFT_443985 [Selaginella moellendorffii]
gi|300153632|gb|EFJ20270.1| hypothetical protein SELMODRAFT_443985 [Selaginella moellendorffii]
Length = 478
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 103/200 (51%), Gaps = 13/200 (6%)
Query: 23 FFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM---- 76
FFK + P I L T GR +GEA VEF + + A RA+Q H+ MG RY+EL+
Sbjct: 158 FFKGMQVAPDGIFLCTHADGRPTGEAFVEFINEETAARAMQLHREPMGSRYVELFKSTKG 217
Query: 77 EEGTSSKEANGRGTGGFGGVKS-TPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVL 135
E TS ++ F GV + +P G + I L + + + A++ G
Sbjct: 218 EMMTSVQQKLW-----FAGVGNMSPVG-SLGQIPGMLGGYGMQGVGALNLGAVQSPGPGA 271
Query: 136 SGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
G + C++++GLPY ++ +F +G IVPNGI + R TG A+++F+ +
Sbjct: 272 IGDISEDVCIKMRGLPYNSGPREITEFFQGYRIVPNGIYVVIGATDRPTGEAFVEFISSK 331
Query: 196 NAEKALLRHKEKIGHRLVTL 215
A++A+ RH+ IG R + L
Sbjct: 332 EAQRAMERHRNNIGSRYIEL 351
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 115/231 (49%), Gaps = 43/231 (18%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
+FF+ + P I++ + GRS+G+A V+F++ + A ++L+R++ ++G RYIE++
Sbjct: 39 EFFRGLDLGPDGIVICVNFQGRSTGQAYVQFATAELANKSLERNRQHIGSRYIEVFKGHP 98
Query: 80 TSSKEA---NGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
+ A GRG+ G G G GI + A +M +
Sbjct: 99 ADMQGAMRMAGRGSSGAYGAAGL-QGTGIPGM----------AGNPDMRFT--------- 138
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
+R++G+PY C D+ F +G+++ P+GI + GR TG A+++F+++E
Sbjct: 139 ------GVVRMRGMPYSCTSADIMAFFKGMQVAPDGIFLCTHADGRPTGEAFVEFINEET 192
Query: 197 AEKALLRHKEKIGHRLVTL-------VMSGAQ---WFLSPPLTNETPISRL 237
A +A+ H+E +G R V L +M+ Q WF + N +P+ L
Sbjct: 193 AARAMQLHREPMGSRYVELFKSTKGEMMTSVQQKLWFAG--VGNMSPVGSL 241
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 5/89 (5%)
Query: 132 GAVLSGSAVDQ-----CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGV 186
G ++ GSA+D +RL+GLP+ + D+++F GL++ P+GI I ++ GR TG
Sbjct: 5 GGLVGGSALDDELKRSNVVRLRGLPFSATEVDIKEFFRGLDLGPDGIVICVNFQGRSTGQ 64
Query: 187 AYIQFVDKENAEKALLRHKEKIGHRLVTL 215
AY+QF E A K+L R+++ IG R + +
Sbjct: 65 AYVQFATAELANKSLERNRQHIGSRYIEV 93
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 21 SQFFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
++FF+ IVP I ++ R +GEA VEF S +AQRA++RH++N+G RYIEL+
Sbjct: 296 TEFFQGYRIVPNGIYVVIGATDRPTGEAFVEFISSKEAQRAMERHRNNIGSRYIELF 352
>gi|302805965|ref|XP_002984733.1| hypothetical protein SELMODRAFT_446014 [Selaginella moellendorffii]
gi|300147715|gb|EFJ14378.1| hypothetical protein SELMODRAFT_446014 [Selaginella moellendorffii]
Length = 483
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 103/200 (51%), Gaps = 13/200 (6%)
Query: 23 FFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM---- 76
FFK + P I L T GR +GEA VEF + + A RA+Q H+ MG RY+EL+
Sbjct: 158 FFKGMQVAPDGIFLCTHADGRPTGEAFVEFINEETAARAMQLHREPMGSRYVELFKSTKG 217
Query: 77 EEGTSSKEANGRGTGGFGGVKS-TPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVL 135
E TS ++ F GV + +P G + I L + + + A++ G
Sbjct: 218 EMMTSVQQKLW-----FAGVGNMSPVGS-LGQIPGMLGGYGMQGVGALNLGAVQSPGPGA 271
Query: 136 SGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
G + C++++GLPY ++ +F +G IVPNGI + R TG A+++F+ +
Sbjct: 272 IGDISEDVCIKMRGLPYNSGPREITEFFQGYRIVPNGIYVVIGATDRPTGEAFVEFISSK 331
Query: 196 NAEKALLRHKEKIGHRLVTL 215
A++A+ RH+ IG R + L
Sbjct: 332 EAQRAMERHRNNIGSRYIEL 351
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 115/231 (49%), Gaps = 43/231 (18%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
+FF+ + P I++ + GRS+G+A V+F++ + A ++L+R++ ++G RYIE++
Sbjct: 39 EFFRGLDLGPDGIVICVNFQGRSTGQAYVQFATAELANKSLERNRQHIGSRYIEVFKGHP 98
Query: 80 TSSKEA---NGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
+ A GRG+ G G G GI + A +M +
Sbjct: 99 ADMQGAMRMAGRGSSGAYGAAGL-QGTGIPGM----------AGNPDMRFT--------- 138
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
+R++G+PY C D+ F +G+++ P+GI + GR TG A+++F+++E
Sbjct: 139 ------GVVRMRGMPYSCTSADIMAFFKGMQVAPDGIFLCTHADGRPTGEAFVEFINEET 192
Query: 197 AEKALLRHKEKIGHRLVTL-------VMSGAQ---WFLSPPLTNETPISRL 237
A +A+ H+E +G R V L +M+ Q WF + N +P+ L
Sbjct: 193 AARAMQLHREPMGSRYVELFKSTKGEMMTSVQQKLWFAG--VGNMSPVGSL 241
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 5/89 (5%)
Query: 132 GAVLSGSAVDQ-----CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGV 186
G ++ GSA+D +RL+GLP+ + D+++F GL++ P+GI I ++ GR TG
Sbjct: 5 GGLVGGSALDDELKRSNVVRLRGLPFSATEVDIKEFFRGLDLGPDGIVICVNFQGRSTGQ 64
Query: 187 AYIQFVDKENAEKALLRHKEKIGHRLVTL 215
AY+QF E A K+L R+++ IG R + +
Sbjct: 65 AYVQFATAELANKSLERNRQHIGSRYIEV 93
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 21 SQFFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
++FF+ IVP I ++ R +GEA VEF S +AQRA++RH++N+G RYIEL+
Sbjct: 296 TEFFQGYRIVPNGIYVVIGATDRPTGEAFVEFISSKEAQRAMERHRNNIGSRYIELF 352
>gi|351695486|gb|EHA98404.1| Heterogeneous nuclear ribonucleoprotein F [Heterocephalus glaber]
Length = 348
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 66/100 (66%), Gaps = 1/100 (1%)
Query: 122 SEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAG 181
+E D LK G + SA +RL+GLP+ C KE++ +F GLEIVPNGIT+P D G
Sbjct: 23 TETDRVLKHSGPDSADSA-KGGFVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEG 81
Query: 182 RCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGAQ 221
+ TG A++QF +E AEKAL +HKE+IGHR + + S Q
Sbjct: 82 KITGEAFVQFASQELAEKALRKHKERIGHRYIEVFKSSQQ 121
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 113/278 (40%), Gaps = 50/278 (17%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIEL----- 74
QFF IVP I L D G+ +GEA V+F+S + A++AL++HK +G RYIE+
Sbjct: 61 QFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALRKHKERIGHRYIEVFKSSQ 120
Query: 75 ---------------------YMEEGTS------------SKEANGRGTGGFGGVKSTPY 101
Y GT+ + ++G + G+GG + +
Sbjct: 121 QEVRSYSDLPLKFMSMQRPGPYDRPGTARRYIGIVKQTGLERMSSGAYSAGYGGFEYSGL 180
Query: 102 GVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEK 161
G + + + S D + + + C+ ++GLPY+ + D+
Sbjct: 181 SEGYGFTTDLFGRGLSYCLSSMYDH--RYGDGEFTVQSTTGHCVHMRGLPYKATENDIYN 238
Query: 162 FLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEK--IGHRLVTL---- 215
F L V I I + GR TG A ++F E A A+ + K++ I HR + L
Sbjct: 239 FFSPLNAVRVHIEIRPN--GRVTGEADVEFATNEEAMAAMSKDKDRTNIQHRYIELFLNS 296
Query: 216 VMSGAQWFLSPPLTNETPISRLDLTGSPVRSTICVLCH 253
M + S + T +S T S + S C+
Sbjct: 297 TMGASNGAYSSQVLQGTGVSAAQATYSGLESQSVGGCY 334
>gi|159163318|pdb|1WG5|A Chain A, Solution Structure Of The First Rrm Domain In
Heterogeneous Nuclear Ribonucleoprotein H
Length = 104
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 57/74 (77%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RL+GLP+ C KE++ +F GLEIVPNG+T+P D+ GR TG A++QF +E AEKAL +H
Sbjct: 18 VRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKH 77
Query: 205 KEKIGHRLVTLVMS 218
KE+IGHR + + S
Sbjct: 78 KERIGHRYIEIFKS 91
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP + L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 34 QFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 89
>gi|353232935|emb|CCD80290.1| putative heterogeneous nuclear ribonucleoprotein (hnrnp)
[Schistosoma mansoni]
Length = 497
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 88/187 (47%), Gaps = 44/187 (23%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I GRS+GEA +E S DD Q+A+ H ++G RYIE++ + S++ N
Sbjct: 35 IYFPQGSNGRSNGEAFIELESKDDKQKAMAHHNQHLGRRYIEVF---DSCSEDLNN---- 87
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+ PY S + +RL+GLP
Sbjct: 88 ---AMGCRPY----------------------------------HSSNRREHVVRLRGLP 110
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
Y+ +K+++ F GLEI PNGI + D+ GRCTG AY+QF E+ +A +H EKIGHR
Sbjct: 111 YDTEKKEIFAFFNGLEIAPNGIGLLVDHMGRCTGEAYVQFTSSESLARAKEKHMEKIGHR 170
Query: 212 LVTLVMS 218
+ + S
Sbjct: 171 YIEIFES 177
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+R++GLPY KED+++FL L+ V I + + A R TG A + F + A++A+ +
Sbjct: 298 SVRMRGLPYSATKEDIDRFLSPLQPV--NIRMRFNAANRPTGEAIVDFASHDEAKEAMKK 355
Query: 204 HKEKIGHRLVTLVMSGAQWFLSPP--LTNETPIS 235
+EKIG R + L ++ +SP + N P+S
Sbjct: 356 DREKIGPRYIELFLASTPKGISPSSRINNSAPVS 389
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 39/55 (70%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
+F P+ PVNI + + A R +GEA V+F+S D+A+ A+++ + +G RYIEL++
Sbjct: 315 RFLSPLQPVNIRMRFNAANRPTGEAIVDFASHDEAKEAMKKDREKIGPRYIELFL 369
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+R++GLP+ +D+ F I GI P GR G A+I+ K++ +KA+
Sbjct: 4 VVRIRGLPFSANADDIISFFHDCRIRGGKRGIYFPQGSNGRSNGEAFIELESKDDKQKAM 63
Query: 202 LRHKEKIGHRLVTLVMS 218
H + +G R + + S
Sbjct: 64 AHHNQHLGRRYIEVFDS 80
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
I P I LL D GR +GEA V+F+S + RA ++H +G RYIE++
Sbjct: 127 IAPNGIGLLVDHMGRCTGEAYVQFTSSESLARAKEKHMEKIGHRYIEIF 175
>gi|256090133|ref|XP_002581068.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|353232934|emb|CCD80289.1| putative heterogeneous nuclear ribonucleoprotein (hnrnp)
[Schistosoma mansoni]
Length = 386
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 88/187 (47%), Gaps = 44/187 (23%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I GRS+GEA +E S DD Q+A+ H ++G RYIE++ + S++ N
Sbjct: 35 IYFPQGSNGRSNGEAFIELESKDDKQKAMAHHNQHLGRRYIEVF---DSCSEDLNN---- 87
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+ PY S + +RL+GLP
Sbjct: 88 ---AMGCRPY----------------------------------HSSNRREHVVRLRGLP 110
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
Y+ +K+++ F GLEI PNGI + D+ GRCTG AY+QF E+ +A +H EKIGHR
Sbjct: 111 YDTEKKEIFAFFNGLEIAPNGIGLLVDHMGRCTGEAYVQFTSSESLARAKEKHMEKIGHR 170
Query: 212 LVTLVMS 218
+ + S
Sbjct: 171 YIEIFES 177
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+R++GLPY KED+++FL L+ P I + + A R TG A + F + A++A+ +
Sbjct: 298 SVRMRGLPYSATKEDIDRFLSPLQ--PVNIRMRFNAANRPTGEAIVDFASHDEAKEAMKK 355
Query: 204 HKEKIGHRLVTLVMSGAQWFLSP 226
+EKIG R + L ++ +SP
Sbjct: 356 DREKIGPRYIELFLASTPKGISP 378
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 39/55 (70%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
+F P+ PVNI + + A R +GEA V+F+S D+A+ A+++ + +G RYIEL++
Sbjct: 315 RFLSPLQPVNIRMRFNAANRPTGEAIVDFASHDEAKEAMKKDREKIGPRYIELFL 369
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+R++GLP+ +D+ F I GI P GR G A+I+ K++ +KA+
Sbjct: 4 VVRIRGLPFSANADDIISFFHDCRIRGGKRGIYFPQGSNGRSNGEAFIELESKDDKQKAM 63
Query: 202 LRHKEKIGHRLVTLVMS 218
H + +G R + + S
Sbjct: 64 AHHNQHLGRRYIEVFDS 80
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
I P I LL D GR +GEA V+F+S + RA ++H +G RYIE++
Sbjct: 127 IAPNGIGLLVDHMGRCTGEAYVQFTSSESLARAKEKHMEKIGHRYIEIF 175
>gi|256090135|ref|XP_002581069.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|353232933|emb|CCD80288.1| putative heterogeneous nuclear ribonucleoprotein (hnrnp)
[Schistosoma mansoni]
Length = 338
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 89/187 (47%), Gaps = 44/187 (23%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I GRS+GEA +E S DD Q+A+ H ++G RYIE++ + S++ N
Sbjct: 35 IYFPQGSNGRSNGEAFIELESKDDKQKAMAHHNQHLGRRYIEVF---DSCSEDLNN---- 87
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+ PY + R E +RL+GLP
Sbjct: 88 ---AMGCRPY---------------HSSNRREH-------------------VVRLRGLP 110
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
Y+ +K+++ F GLEI PNGI + D+ GRCTG AY+QF E+ +A +H EKIGHR
Sbjct: 111 YDTEKKEIFAFFNGLEIAPNGIGLLVDHMGRCTGEAYVQFTSSESLARAKEKHMEKIGHR 170
Query: 212 LVTLVMS 218
+ + S
Sbjct: 171 YIEIFES 177
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
I P I LL D GR +GEA V+F+S + RA ++H +G RYIE++
Sbjct: 127 IAPNGIGLLVDHMGRCTGEAYVQFTSSESLARAKEKHMEKIGHRYIEIF 175
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+R++GLP+ +D+ F I GI P GR G A+I+ K++ +KA+
Sbjct: 5 VRIRGLPFSANADDIISFFHDCRIRGGKRGIYFPQGSNGRSNGEAFIELESKDDKQKAMA 64
Query: 203 RHKEKIGHRLVTLVMS 218
H + +G R + + S
Sbjct: 65 HHNQHLGRRYIEVFDS 80
>gi|335310367|ref|XP_003361999.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2-like [Sus
scrofa]
Length = 444
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 87/187 (46%), Gaps = 48/187 (25%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 43 IRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF---------------- 86
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 87 --------------------------KSNSVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 119
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNG+ A++QF +E AEKAL +HKE+IGHR
Sbjct: 120 FGCSKEEIVQFFSGLEIVPNGMXXX-----XXXXXAFVQFASQEIAEKALKKHKERIGHR 174
Query: 212 LVTLVMS 218
+ + S
Sbjct: 175 YIEIFKS 181
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ P+ + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 302 NFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELFLNSTAG 361
Query: 80 TS 81
TS
Sbjct: 362 TS 363
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L + I I D GR TG A ++F E+A A+ +
Sbjct: 285 CVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPD--GRVTGEADVEFATHEDAVAAMAK 342
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 343 DKANMQHRYVELFLN 357
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQF 191
+LS + ++++GLP+ C ++V +F +I +GI + GR +G A+++
Sbjct: 2 MLSTEGREGFVVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVEL 61
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA---QWFL------SPPLTNE 231
++ + AL + +E +GHR V + S + W L SP N+
Sbjct: 62 ESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHTGPNSPDTAND 110
>gi|351700500|gb|EHB03419.1| Heterogeneous nuclear ribonucleoprotein H3 [Heterocephalus glaber]
Length = 260
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 64/107 (59%), Gaps = 7/107 (6%)
Query: 124 MDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC 183
MDW +K G + +RL GLP+ C KE++ +F + LEI+PNGIT+ DY GR
Sbjct: 1 MDWVMKHNGP----NDASDGTVRLLGLPFGCSKEEIVQFFQWLEIMPNGITMTMDYQGRS 56
Query: 184 TGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG---AQWFLSPP 227
TG ++QF KE AE AL +HKE+IGHR + + S + F PP
Sbjct: 57 TGETFVQFASKEIAENALGKHKERIGHRYIEIFRSSRSKIKGFYDPP 103
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF+ I+P I + D GRS+GE V+F+S + A+ AL +HK +G RYIE++
Sbjct: 34 QFFQWLEIMPNGITMTMDYQGRSTGETFVQFASKEIAENALGKHKERIGHRYIEIF 89
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGG 95
GR+ GEADVEF + +D A+ + K+NM RYIEL++ ++ + +G G G GG
Sbjct: 161 GRAKGEADVEFVTHEDPVAAMSKDKNNMQHRYIELFLN--STPRGGSGMGDSGIGG 214
>gi|193636729|ref|XP_001950119.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like
[Acyrthosiphon pisum]
Length = 440
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 96/201 (47%), Gaps = 45/201 (22%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
G+ S +A VE S + + AL++ + MG+RYI+++
Sbjct: 66 GKPSSQAYVEMESEESLKAALKKDREYMGNRYIKVF------------------------ 101
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
+KRSEM+WA+K G+ L D C R++GLP++ K ++
Sbjct: 102 ------------------PSKRSEMEWAIKITGSTLDNELYDNCV-RIRGLPFDYTKNEI 142
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+F +GLEI P+ ITI + GR A++QFV++EN EKAL +H EKI R + + S
Sbjct: 143 VEFFQGLEITPDDITIVINSKGRRMKEAFVQFVNRENLEKALQKHMEKIRFRYIEVFRSS 202
Query: 220 AQWFLS--PPLTNETPISRLD 238
+ +TP R+D
Sbjct: 203 LVEIRKSLKRRSRQTPYDRMD 223
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 43/59 (72%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FF+P+ PVNI + ++ + GEA+VEF +++DA +A+ ++K+ M RYIEL+M E
Sbjct: 298 IAKFFEPLKPVNIHFIFNNNNQPYGEANVEFGNIEDAVQAMSKNKTFMEHRYIELFMVE 356
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 95/219 (43%), Gaps = 31/219 (14%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
+FF+ I P +I ++ + GR EA V+F + ++ ++ALQ+H + RYIE++
Sbjct: 144 EFFQGLEITPDDITIVINSKGRRMKEAFVQFVNRENLEKALQKHMEKIRFRYIEVFRSSL 203
Query: 80 TSSKEANGRGTGGFGGVKSTPYG-----VGIFCISQFLAKWMRRAKRSEMDWALKRQGAV 134
+++ R + + TPY S +++ + R+E D G
Sbjct: 204 VEIRKSLKRRS------RQTPYDRMDSFASSGGNSGGRGQYIDMSMRTERDMRSFGSGRS 257
Query: 135 LSGSAVDQC----------------CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHD 178
+ + ++GLP + K D+ KF E L+ P I +
Sbjct: 258 MGRPRGGSRGGASKNWNPSPSRPLHVVHMKGLPLKANKNDIAKFFEPLK--PVNIHFIFN 315
Query: 179 YAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVM 217
+ G A ++F + E+A +A+ ++K + HR + L M
Sbjct: 316 NNNQPYGEANVEFGNIEDAVQAMSKNKTFMEHRYIELFM 354
>gi|256090131|ref|XP_002581067.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
Length = 472
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 89/187 (47%), Gaps = 44/187 (23%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I GRS+GEA +E S DD Q+A+ H ++G RYIE++ + S++ N
Sbjct: 35 IYFPQGSNGRSNGEAFIELESKDDKQKAMAHHNQHLGRRYIEVF---DSCSEDLNN---- 87
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+ PY + R E +RL+GLP
Sbjct: 88 ---AMGCRPY---------------HSSNRREH-------------------VVRLRGLP 110
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
Y+ +K+++ F GLEI PNGI + D+ GRCTG AY+QF E+ +A +H EKIGHR
Sbjct: 111 YDTEKKEIFAFFNGLEIAPNGIGLLVDHMGRCTGEAYVQFTSSESLARAKEKHMEKIGHR 170
Query: 212 LVTLVMS 218
+ + S
Sbjct: 171 YIEIFES 177
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+R++GLPY KED+++FL L+ V I + + A R TG A + F + A++A+ +
Sbjct: 298 SVRMRGLPYSATKEDIDRFLSPLQPV--NIRMRFNAANRPTGEAIVDFASHDEAKEAMKK 355
Query: 204 HKEKIGHRLVTLVMSGAQWFLSPP--LTNETPIS 235
+EKIG R + L ++ +SP + N P+S
Sbjct: 356 DREKIGPRYIELFLASTPKGISPSSRINNSAPVS 389
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 39/55 (70%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
+F P+ PVNI + + A R +GEA V+F+S D+A+ A+++ + +G RYIEL++
Sbjct: 315 RFLSPLQPVNIRMRFNAANRPTGEAIVDFASHDEAKEAMKKDREKIGPRYIELFL 369
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+R++GLP+ +D+ F I GI P GR G A+I+ K++ +KA+
Sbjct: 5 VRIRGLPFSANADDIISFFHDCRIRGGKRGIYFPQGSNGRSNGEAFIELESKDDKQKAMA 64
Query: 203 RHKEKIGHRLVTLVMS 218
H + +G R + + S
Sbjct: 65 HHNQHLGRRYIEVFDS 80
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
I P I LL D GR +GEA V+F+S + RA ++H +G RYIE++
Sbjct: 127 IAPNGIGLLVDHMGRCTGEAYVQFTSSESLARAKEKHMEKIGHRYIEIF 175
>gi|288806582|ref|NP_001165773.1| G-rich RNA sequence binding factor 1 [Xenopus (Silurana)
tropicalis]
gi|189442327|gb|AAI67701.1| Unknown (protein for MGC:186196) [Xenopus (Silurana) tropicalis]
Length = 348
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 89/179 (49%), Gaps = 27/179 (15%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
G+ G+A +EF S +D Q+A+++HK MG RY+E++ + KEA
Sbjct: 42 GKPRGDAVIEFESAEDVQKAVEQHKKYMGQRYVEVFE---MNQKEAES------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
L M A ++ S +RL+GLPY C ++D+
Sbjct: 87 ------------LLNRMHSALSPTRPSSMSLSPQSSMASPPSDGVVRLRGLPYSCSEQDI 134
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
F GL+I GIT D GR +G A++QF+ +E+A++ALL+HK++IG R + + S
Sbjct: 135 IHFFSGLDIADEGITFVLDQRGRKSGEAFVQFLSQEHADQALLKHKQEIGSRYIEIFPS 193
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 24/210 (11%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEAN 86
I I + D GR SGEA V+F S + A +AL +HK +G RYIE++ N
Sbjct: 143 IADEGITFVLDQRGRKSGEAFVQFLSQEHADQALLKHKQEIGSRYIEIF------PSRRN 196
Query: 87 GRGTGGF-----GGVKSTPYGVGIF----CISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
T F GV P ++ CI+ + + ++ + S
Sbjct: 197 EIQTARFPFRRRKGVTFAPTIKDLYDPDNCINNTSKDLLSDVPENGHINDYVKEMSAKSM 256
Query: 138 SAVDQCCM------RLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDY-AGRCTGVAYIQ 190
D M ++GLP+ +D+ F I+P I+I + AG TG A ++
Sbjct: 257 DVQDFTVMSPVHDIHIRGLPFHASGQDIANFFH--PIMPLKISIEYSADAGGATGEAVVR 314
Query: 191 FVDKENAEKALLRHKEKIGHRLVTLVMSGA 220
F+ E+A A+ +++ H + L ++ +
Sbjct: 315 FLTHEDAVAAMAKNRCHTQHGYLELYLNSS 344
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 21 SQFFKPIVPVNILL-LTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
+ FF PI+P+ I + + DAG ++GEA V F + +DA A+ +++ + Y+ELY+
Sbjct: 285 ANFFHPIMPLKISIEYSADAGGATGEAVVRFLTHEDAVAAMAKNRCHTQHGYLELYLNSS 344
Query: 80 TSSK 83
SK
Sbjct: 345 PESK 348
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPH---DYAGRCTGVAYIQFVDKENAEKAL 201
+R++GLP+ C +DV F G V NG H + G+ G A I+F E+ +KA+
Sbjct: 4 VRVRGLPWSCTADDVLNFF-GDSNVRNGTEGVHFIFNRDGKPRGDAVIEFESAEDVQKAV 62
Query: 202 LRHKEKIGHRLVTL 215
+HK+ +G R V +
Sbjct: 63 EQHKKYMGQRYVEV 76
>gi|169641981|gb|AAI60694.1| LOC100158276 protein [Xenopus laevis]
Length = 348
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 89/179 (49%), Gaps = 27/179 (15%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
G+ G+A +EF S +D Q+A+++HK MG RY+E++ + KEA
Sbjct: 42 GKPRGDAVIEFESAEDVQKAVEQHKKYMGQRYVEVFE---MNQKEAES------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
L M A ++ S +RL+GLPY C ++D+
Sbjct: 87 ------------LLNRMHSALSPTRPSSMSLSPQSSMASPPSDGIVRLRGLPYSCSEQDI 134
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
F GL+I GIT D GR +G A++QF+ +E+A++ALL+HK++IG R + + S
Sbjct: 135 IHFFSGLDIADEGITFVLDQRGRKSGEAFVQFLSQEHADQALLKHKQEIGSRYIEIFPS 193
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 24/210 (11%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEAN 86
I I + D GR SGEA V+F S + A +AL +HK +G RYIE++ N
Sbjct: 143 IADEGITFVLDQRGRKSGEAFVQFLSQEHADQALLKHKQEIGSRYIEIF------PSRRN 196
Query: 87 GRGTGGF-----GGVKSTPYGVGIF----CISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
T F GV P ++ CI+ + + ++ + S
Sbjct: 197 DVQTARFPFRRRKGVTFAPTIKDLYDPDNCINNTSKDLLSDVPENGHINDYVKEMSAKSV 256
Query: 138 SAVDQCCM------RLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDY-AGRCTGVAYIQ 190
D M ++GLP+ +D+ F I+P I+I + AG TG A ++
Sbjct: 257 DVHDFTVMSPVHDIHIRGLPFHASGQDIANFFH--PIMPLKISIEYSADAGGATGEAVVR 314
Query: 191 FVDKENAEKALLRHKEKIGHRLVTLVMSGA 220
F+ ++A A+ +++ H + L ++ +
Sbjct: 315 FLTHDDAVAAMAKNRCHSQHGYLELYLNSS 344
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 21 SQFFKPIVPVNILL-LTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
+ FF PI+P+ I + + DAG ++GEA V F + DDA A+ +++ + Y+ELY+
Sbjct: 285 ANFFHPIMPLKISIEYSADAGGATGEAVVRFLTHDDAVAAMAKNRCHSQHGYLELYLNSS 344
Query: 80 TSSK 83
T SK
Sbjct: 345 TDSK 348
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+R++GLP+ C +DV F + + +G+ + G+ G A I+F E+ +KA+
Sbjct: 4 VRVRGLPWSCTADDVLNFFDDSNVRNGTDGVHFIFNRDGKPRGDAVIEFESAEDVQKAVE 63
Query: 203 RHKEKIGHRLVTL 215
+HK+ +G R V +
Sbjct: 64 QHKKYMGQRYVEV 76
>gi|402910822|ref|XP_003918047.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 [Papio
anubis]
Length = 386
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 54/72 (75%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKE 206
QGLP+ C KE++ +F GLEIVPNG+T+P D+ GR TG A++QF +E AEKAL +HKE
Sbjct: 69 FQGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKE 128
Query: 207 KIGHRLVTLVMS 218
+IGHR + + S
Sbjct: 129 RIGHRYIEIFKS 140
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ P+ + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 261 NFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELFLNSTAG 320
Query: 80 TSSKEANGRGT---GGFGGVKSTPYG 102
T+ G+ GG G + YG
Sbjct: 321 TTGASGGAYGSQMMGGMGLSNQSSYG 346
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP + L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 83 QFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 138
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L + I I D GR TG A ++F E+A A+ +
Sbjct: 244 CVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPD--GRVTGEADVEFATHEDAVAAMAK 301
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 302 DKANMQHRYVELFLN 316
>gi|350529357|ref|NP_001121205.2| G-rich RNA sequence binding factor 1 [Xenopus laevis]
Length = 440
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 89/179 (49%), Gaps = 27/179 (15%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
G+ G+A +EF S +D Q+A+++HK MG RY+E++ + KEA
Sbjct: 134 GKPRGDAVIEFESAEDVQKAVEQHKKYMGQRYVEVFE---MNQKEAES------------ 178
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
L M A ++ S +RL+GLPY C ++D+
Sbjct: 179 ------------LLNRMHSALSPTRPSSMSLSPQSSMASPPSDGIVRLRGLPYSCSEQDI 226
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
F GL+I GIT D GR +G A++QF+ +E+A++ALL+HK++IG R + + S
Sbjct: 227 IHFFSGLDIADEGITFVLDQRGRKSGEAFVQFLSQEHADQALLKHKQEIGSRYIEIFPS 285
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 24/210 (11%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEAN 86
I I + D GR SGEA V+F S + A +AL +HK +G RYIE++ N
Sbjct: 235 IADEGITFVLDQRGRKSGEAFVQFLSQEHADQALLKHKQEIGSRYIEIF------PSRRN 288
Query: 87 GRGTGGF-----GGVKSTPYGVGIF----CISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
T F GV P ++ CI+ + + ++ + S
Sbjct: 289 DVQTARFPFRRRKGVTFAPTIKDLYDPDNCINNTSKDLLSDVPENGHINDYVKEMSAKSV 348
Query: 138 SAVDQCCM------RLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDY-AGRCTGVAYIQ 190
D M ++GLP+ +D+ F I+P I+I + AG TG A ++
Sbjct: 349 DVHDFTVMSPVHDIHIRGLPFHASGQDIANFFH--PIMPLKISIEYSADAGGATGEAVVR 406
Query: 191 FVDKENAEKALLRHKEKIGHRLVTLVMSGA 220
F+ ++A A+ +++ H + L ++ +
Sbjct: 407 FLTHDDAVAAMAKNRCHSQHGYLELYLNSS 436
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 21 SQFFKPIVPVNILL-LTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
+ FF PI+P+ I + + DAG ++GEA V F + DDA A+ +++ + Y+ELY+
Sbjct: 377 ANFFHPIMPLKISIEYSADAGGATGEAVVRFLTHDDAVAAMAKNRCHSQHGYLELYLNSS 436
Query: 80 TSSK 83
T SK
Sbjct: 437 TDSK 440
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+R++GLP+ C +DV F + + +G+ + G+ G A I+F E+ +KA+
Sbjct: 96 VRVRGLPWSCTADDVLNFFDDSNVRNGTDGVHFIFNRDGKPRGDAVIEFESAEDVQKAVE 155
Query: 203 RHKEKIGHRLVTL 215
+HK+ +G R V +
Sbjct: 156 QHKKYMGQRYVEV 168
>gi|157883792|pdb|2HGM|A Chain A, Nmr Structure Of The Second Qrrm Domain Of Human Hnrnp F
gi|297787487|pdb|2KG0|A Chain A, Structure Of The Second Qrrm Domain Of Hnrnp F In Complex
With A Agggau G-Tract Rna
Length = 126
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 59/83 (71%)
Query: 136 SGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
S + + +RL+GLP+ C KE++ +F GLEIVPNGIT+P D G+ TG A++QF +E
Sbjct: 36 SADSANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQE 95
Query: 196 NAEKALLRHKEKIGHRLVTLVMS 218
AEKAL +HKE+IGHR + + S
Sbjct: 96 LAEKALGKHKERIGHRYIEVFKS 118
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D G+ +GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 61 QFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVF 116
>gi|410923501|ref|XP_003975220.1| PREDICTED: G-rich sequence factor 1-like [Takifugu rubripes]
Length = 380
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 98/215 (45%), Gaps = 49/215 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR +G A +E +D +AL++H+ +G RY+E+Y E S EA
Sbjct: 121 IHFTLNKMGRPTGIAFIEMEDEEDVNKALEKHRQYLGPRYVEVY-EVTESDAEA------ 173
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
M +A +GS D +RL+GLP
Sbjct: 174 -----------------------IMEKA----------------TGSQADDGVVRLRGLP 194
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ K D+ +F L+IV NGITI D+AGR +G A++QF KE AEKALLR + +G R
Sbjct: 195 FSSTKADIAQFFSDLDIVENGITIITDHAGRNSGEAFVQFFSKEEAEKALLRDRAVMGTR 254
Query: 212 LVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVRS 246
+ + S ++ S + +S TG VR+
Sbjct: 255 YIEVFPSRSEEVYSSKRMRNSGVSD---TGHSVRN 286
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 97/203 (47%), Gaps = 35/203 (17%)
Query: 21 SQFFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY--- 75
+QFF IV I ++TD AGR+SGEA V+F S ++A++AL R ++ MG RYIE++
Sbjct: 203 AQFFSDLDIVENGITIITDHAGRNSGEAFVQFFSKEEAEKALLRDRAVMGTRYIEVFPSR 262
Query: 76 MEEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVL 135
EE SSK GV T + V R +R+ Q V
Sbjct: 263 SEEVYSSKRMRN------SGVSDTGHSV--------------RNRRT------TSQSLVQ 296
Query: 136 SGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ + MR GLP++ EDV F L V + + + GR +G A + F E
Sbjct: 297 NSLPLHYIHMR--GLPFQVSGEDVVNFFRPL--VVSKMLMEFGPDGRPSGEADVYFGRHE 352
Query: 196 NAEKALLRHKEKIGHRLVTLVMS 218
+A A+ R +E IG R + L ++
Sbjct: 353 DAVAAMSRDREHIGGRYIELFLN 375
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVP--NGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
++++GL + C +D+ KF I GI + GR TG+A+I+ D+E+ KAL
Sbjct: 91 VQVKGLLWSCTPQDLLKFFSDCRIRDGVKGIHFTLNKMGRPTGIAFIEMEDEEDVNKALE 150
Query: 203 RHKEKIGHRLV---TLVMSGAQWFLSPPLTNETPISRLDLTGSPVRST 247
+H++ +G R V + S A+ + ++ + L G P ST
Sbjct: 151 KHRQYLGPRYVEVYEVTESDAEAIMEKATGSQADDGVVRLRGLPFSST 198
>gi|358341226|dbj|GAA32134.2| heterogeneous nuclear ribonucleoprotein F/H [Clonorchis sinensis]
Length = 404
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 88/200 (44%), Gaps = 48/200 (24%)
Query: 23 FFKPIVPVN----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
FFK + N I GRS+GEA +E S + ++A H +MG RYIE++
Sbjct: 21 FFKDVKIKNGKRGIFFPQGPNGRSNGEAFIELESKQEIEKATAHHNEHMGRRYIEVFPST 80
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
A G+ ++ R K
Sbjct: 81 EQEMNNAMGKHD-----------------------QYTRDRK------------------ 99
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAE 198
+ +RL+GLPY+ +K+++ F GLEI PNGI + D+ GRCTG AY+QF E
Sbjct: 100 ---EYVVRLRGLPYDTEKKEIYAFFNGLEIAPNGIGLLVDHMGRCTGEAYVQFTSAEMLA 156
Query: 199 KALLRHKEKIGHRLVTLVMS 218
+A +H EKIGHR + + S
Sbjct: 157 RAKEKHMEKIGHRYIEIFES 176
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 40/55 (72%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
+F P+ PVN+ + + +GR +GEA V+F+S D+A+ A+++ + +G RYIEL++
Sbjct: 321 RFLAPLQPVNVRIRMNSSGRPTGEAVVDFASHDEAKEAMKKDREKIGSRYIELFL 375
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAE 198
+V +RL+GLP+ +D+++FL L+ P + I + +GR TG A + F + A+
Sbjct: 299 SVTGHSVRLRGLPFSATADDIDRFLAPLQ--PVNVRIRMNSSGRPTGEAVVDFASHDEAK 356
Query: 199 KALLRHKEKIGHRLVTLVMSGAQWFLSP 226
+A+ + +EKIG R + L ++ +P
Sbjct: 357 EAMKKDREKIGSRYIELFLASTPMGNAP 384
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+R++GLPY + +D+ F + ++I GI P GR G A+I+ K+ EKA
Sbjct: 2 AVVRIRGLPYSARADDIIDFFKDVKIKNGKRGIFFPQGPNGRSNGEAFIELESKQEIEKA 61
Query: 201 LLRHKEKIGHRLVTLVMSGAQ 221
H E +G R + + S Q
Sbjct: 62 TAHHNEHMGRRYIEVFPSTEQ 82
>gi|410957462|ref|XP_003985346.1| PREDICTED: G-rich sequence factor 1 [Felis catus]
Length = 361
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 88/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 64 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 115
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S AV+ +RL+GLP
Sbjct: 116 -----------------------------------ALMKSLQVKSSPAVNDGVVRLRGLP 140
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 141 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 198
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 199 RYIEIFPS 206
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++ S
Sbjct: 151 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIF----PS 206
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMR--------RAKRSEMDWALKRQ-- 131
+ G G K T + + + A SE + L ++
Sbjct: 207 RRNEVRTHVGSHKGKKMTSPTAKYITEPEMVFEEHEVNEDIRPMTAFESEKEIELPKEMS 266
Query: 132 ----GAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVA 187
AV G+ + ++GLP++ +D+ F L+ P IT+ + G+ TG A
Sbjct: 267 EKLPEAVDFGTPSSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSNGKATGEA 324
Query: 188 YIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+ F E+A A+L+ + + HR + L ++
Sbjct: 325 DVHFDTHEDAVAAMLKDRSHVHHRYIELFLNS 356
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 300 NFFAPLKPVRITMEYSSNGKATGEADVHFDTHEDAVAAMLKDRSHVHHRYIELFL 354
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 137 GSAVDQC-CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVD 193
G VD +R QGLP+ C EDV F I NGI + G+ G A I+
Sbjct: 25 GEEVDDVYLIRAQGLPWSCTIEDVVNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMES 84
Query: 194 KENAEKALLRHKEKIGHRLVTL 215
+++ +KAL +H+ +G R V +
Sbjct: 85 EQDVQKALEKHRMYMGQRYVEV 106
>gi|34533956|dbj|BAC86863.1| unnamed protein product [Homo sapiens]
Length = 447
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 149 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 200
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 201 -----------------------------------ALMKSLQVKSSPVVNDGVVRLRGLP 225
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C +ED+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 226 YSCNEEDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 283
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 284 RYIEIFPS 291
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY----ME 77
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++ E
Sbjct: 236 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 295
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWM-RRAKRSEMDWALKRQ----- 131
T G+ F K +F + A SE + L ++
Sbjct: 296 VRTHVGSYKGKKIASFPTAKYITEPEMVFEEHEVNEDIQPMTAFESEKEIELPKEVPEKL 355
Query: 132 -GAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
A G+ + ++GLP++ +D+ F L+ P IT+ + +G+ TG A +
Sbjct: 356 PEAADFGTTSSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEADVH 413
Query: 191 FVDKENAEKALLRHKEKIGHRLVTLVMS 218
F E+A A+L+ + + HR + L ++
Sbjct: 414 FETHEDAVAAMLKDRSHVHHRYIELFLN 441
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 386 NFFAPLKPVRITMEYSSSGKATGEADVHFETHEDAVAAMLKDRSHVHHRYIELFL 440
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAE 198
D +R QGLP+ C EDV F I NGI + G+ G A I+ +++ +
Sbjct: 115 DVFLIRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQ 174
Query: 199 KALLRHKEKIGHRLVTL 215
KAL +H+ +G R V +
Sbjct: 175 KALEKHRMYMGQRYVEV 191
>gi|442746051|gb|JAA65185.1| Putative splicing factor hnrnp-f, partial [Ixodes ricinus]
Length = 141
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 68/137 (49%), Gaps = 43/137 (31%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA +E S D + LQRH ++G RYIE++
Sbjct: 48 GRPSGEAYIELESEQDVEVGLQRHNEHIGHRYIEVF------------------------ 83
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++KRSEMDW +KR GA S D C+RL+GLP+ C KE++
Sbjct: 84 ------------------KSKRSEMDWVVKRSGAHQQDSLND-GCVRLRGLPFGCSKEEI 124
Query: 160 EKFLEGLEIVPNGITIP 176
+F GLEIVPNGIT+P
Sbjct: 125 AQFFSGLEIVPNGITLP 141
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEI-VPNGITIPH---DYAGRCTGVAYIQFVDKENAEK 199
+R++GLP+ KE++ F E+ + GI+ H GR +G AYI+ +++ E
Sbjct: 7 VLRIRGLPWSPTKEEILNFFTSKEVNIKGGISGVHMTLSREGRPSGEAYIELESEQDVEV 66
Query: 200 ALLRHKEKIGHRLVTLVMS 218
L RH E IGHR + + S
Sbjct: 67 GLQRHNEHIGHRYIEVFKS 85
>gi|441626116|ref|XP_003265953.2| PREDICTED: G-rich sequence factor 1 [Nomascus leucogenys]
Length = 539
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 90/188 (47%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 241 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINN---- 288
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++D AL + V S V+ +RL+GLP
Sbjct: 289 ------------------------------EDVD-ALMKSLEVKSSPVVNDGVVRLRGLP 317
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 318 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 375
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 376 RYIEIFPS 383
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 22/212 (10%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++ S
Sbjct: 328 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIF----PS 383
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRR---------AKRSEMDWALKRQ- 131
+ G + G K T + + + A SE + L ++
Sbjct: 384 RRNEVRTHVGSYKGKKITSFPTAKYITEPEMVFEEHEVNEDIQPMTAFESEKEIELPKEV 443
Query: 132 -----GAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGV 186
A G+ + ++GLP++ +D+ F L+ P IT+ + +G+ TG
Sbjct: 444 PEKLPEAADFGTTSSLHFVHVRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGE 501
Query: 187 AYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
A + F E+A A+L+ + + HR + L ++
Sbjct: 502 ADVHFETHEDAVAAMLKDRSHVHHRYIELFLN 533
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 478 NFFAPLKPVRITMEYSSSGKATGEADVHFETHEDAVAAMLKDRSHVHHRYIELFL 532
>gi|221042436|dbj|BAH12895.1| unnamed protein product [Homo sapiens]
Length = 393
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 95 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 146
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 147 -----------------------------------ALMKSLQVKSSPVVNDGVVRLRGLP 171
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 172 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 229
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 230 RYIEIFPS 237
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY----ME 77
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++ E
Sbjct: 182 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 241
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWM-RRAKRSEMDWALKRQ----- 131
T G+ F K +F + A SE + L ++
Sbjct: 242 VRTHVGSYKGKKIASFPTAKYITEPEMVFEEHEVNEDIQPMTAFESEKEIELPKEVPEKL 301
Query: 132 -GAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
A G+ + ++GLP++ +D+ F L+ P IT+ + +G+ TG A +
Sbjct: 302 PEAADFGTTSSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEADVH 359
Query: 191 FVDKENAEKALLRHKEKIGHRLVTLVMSG 219
F E+A A+L+ + + HR + L ++
Sbjct: 360 FETHEDAVAAMLKDRSHVHHRYIELFLNS 388
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 332 NFFAPLKPVRITMEYSSSGKATGEADVHFETHEDAVAAMLKDRSHVHHRYIELFL 386
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAE 198
D +R QGLP+ C EDV F I NGI + G+ G A I+ +++ +
Sbjct: 61 DVFLIRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQ 120
Query: 199 KALLRHKEKIGHRLVTL 215
KAL +H+ +G R V +
Sbjct: 121 KALEKHRMYMGQRYVEV 137
>gi|328717324|ref|XP_001952255.2| PREDICTED: hypothetical protein LOC100163028 [Acyrthosiphon pisum]
Length = 819
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 96/202 (47%), Gaps = 51/202 (25%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR +G+A V+ S ++ + AL++ M DRYI ++
Sbjct: 605 GRPNGQAYVDMESEENLKAALKQDGEYMRDRYINVF------------------------ 640
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
+ RSEM+ +K G+ L C+ ++GLP++ K+D+
Sbjct: 641 ------------------PSNRSEMEQDIKENGSKLDSDN----CVHIRGLPFDFTKDDI 678
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+F +GLE++PNGITI + AGR A++QFV++EN EKAL +H +KI R + + S
Sbjct: 679 VEFFQGLEMIPNGITISNSSAGRIG--AFVQFVNRENVEKALKKHMKKIRQRYIEVFRSS 736
Query: 220 AQWFLSPPLT---NETPISRLD 238
+ L +TP R+D
Sbjct: 737 LTEINNQALQRRPRQTPYDRMD 758
>gi|221041252|dbj|BAH12303.1| unnamed protein product [Homo sapiens]
Length = 448
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 150 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 201
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 202 -----------------------------------ALMKSLQVKSSPVVNDGVVRLRGLP 226
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 227 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 284
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 285 RYIEIFPS 292
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY----ME 77
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++ E
Sbjct: 237 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 296
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWM-RRAKRSEMDWALKRQ----- 131
T G+ F K +F + A SE + L ++
Sbjct: 297 VRTHVGSYKGKKIASFPTAKYITEPEMVFEEHEVNEDIQPMTAFESEKEIELPKEVPEKL 356
Query: 132 -GAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
A G+ + ++GLP++ +D+ F L+ P IT+ + +G+ TG A +
Sbjct: 357 PEAADFGTTSSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEADVH 414
Query: 191 FVDKENAEKALLRHKEKIGHRLVTLVMSG 219
F E+A A+L+ + + HR + L ++
Sbjct: 415 FETHEDAVAAMLKDRSHVHHRYIELFLNS 443
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 387 NFFAPLKPVRITMEYSSSGKATGEADVHFETHEDAVAAMLKDRSHVHHRYIELFL 441
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 135 LSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFV 192
L D +R QGLP+ C EDV F I NGI + G+ G A I+
Sbjct: 110 LEEEVDDVFLIRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEME 169
Query: 193 DKENAEKALLRHKEKIGHRLVTL 215
+++ +KAL +H+ +G R V +
Sbjct: 170 SEQDVQKALEKHRMYMGQRYVEV 192
>gi|395737930|ref|XP_003777005.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein H2-like [Pongo abelii]
Length = 596
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 87/190 (45%), Gaps = 44/190 (23%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S +R + + MG R++E++
Sbjct: 30 ICFIYTREGRPSGEAFVELESXQ-MKRTGFKDRETMGHRHVEVF---------------- 72
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW K G +A D + L+GLP
Sbjct: 73 --------------------------KSNSVEMDWVSKHTGLNSPDTANDGF-VWLRGLP 105
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ F GLEIVPNGIT+ D+ GR TG A++ +E AE AL +H+E+IGHR
Sbjct: 106 FGCXKEEIVHFFSGLEIVPNGITLXVDFQGRSTGEAFVPLASQEIAETALKKHRERIGHR 165
Query: 212 LVTLVMSGAQ 221
+ + S A+
Sbjct: 166 YIEIXNSQAE 175
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 95/230 (41%), Gaps = 39/230 (16%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE-------- 78
IVP I L D GRS+GEA V +S + A+ AL++H+ +G RYIE+ +
Sbjct: 122 IVPNGITLXVDFQGRSTGEAFVPLASQEIAETALKKHRERIGHRYIEIXNSQAEVHTYCD 181
Query: 79 -----------GTSSKEANGRG------TGGFGGVKSTPYGVGIFCISQFLA---KWMRR 118
G S + GRG GF ++ PYG G + + R
Sbjct: 182 PCQKLMAVQWPGPSDRPGAGRGYNSIGRGAGFERMRQGPYGGGYRDYDDYCGCNDGYGFR 241
Query: 119 AKRSEMDW-----ALKRQGAVLSGSAVDQC---CMRLQGLPYECKKEDVEKFLEGLEIVP 170
+ R D + SGS+ C+ +GLPY K + F L V
Sbjct: 242 SDRFGKDCNYCFSGMSDHRXGDSGSSFQSTTGHCVHTRGLPYRATK-NXYNFYSPLNHVR 300
Query: 171 NGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGA 220
I I D R TG A ++F ++A A+ + K + HR + + ++ A
Sbjct: 301 VHIEIGPD--DRVTGRADVEFAAHKDAVVAMAKDKANMQHRYMEIFLNAA 348
Score = 44.3 bits (103), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 22 QFFKPI--VPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
F+ P+ V V+I + DD R +G ADVEF++ DA A+ + K+NM RY+E+++
Sbjct: 291 NFYSPLNHVRVHIEIGPDD--RVTGRADVEFAAHKDAVVAMAKDKANMQHRYMEIFLNAA 348
Query: 80 TSSKEANG 87
++ + G
Sbjct: 349 GTTGASGG 356
>gi|426344574|ref|XP_004038836.1| PREDICTED: G-rich sequence factor 1 [Gorilla gorilla gorilla]
Length = 362
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 64 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 115
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 116 -----------------------------------ALMKSLQVKSSPVVNDGVVRLRGLP 140
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 141 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 198
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 199 RYIEIFPS 206
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY----ME 77
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++ E
Sbjct: 151 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 210
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWM-RRAKRSEMDWALKRQ----- 131
T G+ F K +F + A SE + L ++
Sbjct: 211 VRTHVGSYKGKKIASFPTAKYITEPEMVFEEHEVNEDIQPMTAFESEKEIELPKEVPEKL 270
Query: 132 -GAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
A G+ + ++GLP++ +D+ F L+ P IT+ + +G+ TG A +
Sbjct: 271 PEAADFGTTSSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEADVH 328
Query: 191 FVDKENAEKALLRHKEKIGHRLVTLVMSG 219
F E+A A+L+ + I HR + L ++
Sbjct: 329 FETHEDAVAAMLKDRSHIHHRYIELFLNS 357
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 301 NFFAPLKPVRITMEYSSSGKATGEADVHFETHEDAVAAMLKDRSHIHHRYIELFL 355
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 135 LSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFV 192
L D +R QGLP+ C EDV F I NGI + G+ G A I+
Sbjct: 24 LEEEVDDVFLIRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEME 83
Query: 193 DKENAEKALLRHKEKIGHRLVTL 215
+++ +KAL +H+ +G R V +
Sbjct: 84 SEQDVQKALEKHRMYMGQRYVEV 106
>gi|221040122|dbj|BAH11824.1| unnamed protein product [Homo sapiens]
Length = 362
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 64 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 115
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 116 -----------------------------------ALMKSLQVKSSPVVNDGVVRLRGLP 140
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 141 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 198
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 199 RYIEIFPS 206
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY----ME 77
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++ E
Sbjct: 151 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 210
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWM-RRAKRSEMDWALKRQ----- 131
T G+ F K +F + A SE + L ++
Sbjct: 211 VRTHVGSYKGKKIASFPTAKYITEPEMVFEEHEVNEDIQPMTASESEKEIELPKEVPEKL 270
Query: 132 -GAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
A G+ + ++GLP++ +D+ F L+ P IT+ + +G+ TG A +
Sbjct: 271 PEAADFGTTSSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEADVH 328
Query: 191 FVDKENAEKALLRHKEKIGHRLVTLVMSG 219
F E+A A+L+ + + HR + L ++
Sbjct: 329 FETHEDAVAAMLKDRSHVHHRYIELFLNS 357
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 301 NFFAPLKPVRITMEYSSSGKATGEADVHFETHEDAVAAMLKDRSHVHHRYIELFL 355
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 135 LSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFV 192
L D +R QGLP+ C EDV F I NGI + G+ G A I+
Sbjct: 24 LEEEVDDVFLIRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEME 83
Query: 193 DKENAEKALLRHKEKIGHRLVTL 215
+++ +KAL +H+ +G R V +
Sbjct: 84 SEQDVQKALEKHRMYMGQRYVEV 106
>gi|397475207|ref|XP_003809035.1| PREDICTED: G-rich sequence factor 1 [Pan paniscus]
Length = 362
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 64 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 115
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 116 -----------------------------------ALMKSLQVKSSPVVNDGVVRLRGLP 140
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 141 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 198
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 199 RYIEIFPS 206
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY----ME 77
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++ E
Sbjct: 151 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 210
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWM-RRAKRSEMDWALKRQ----- 131
T G+ F K +F + A SE + L ++
Sbjct: 211 VRTHVGSYKGKKIASFPTAKYITEPEMVFEEHEVNEDIQPMTAFESEKEIELPKEVPEKL 270
Query: 132 -GAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
A G+ + ++GLP++ +D+ F L+ P IT+ + +G+ TG A +
Sbjct: 271 PEAADFGTTSSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEADVH 328
Query: 191 FVDKENAEKALLRHKEKIGHRLVTLVMSG 219
F E+A A+L+ + + HR + L ++
Sbjct: 329 FETHEDAVAAMLKDRSHVHHRYIELFLNS 357
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 301 NFFAPLKPVRITMEYSSSGKATGEADVHFETHEDAVAAMLKDRSHVHHRYIELFL 355
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 135 LSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFV 192
L D +R QGLP+ C EDV F I NGI + G+ G A I+
Sbjct: 24 LEEEVDDVFLIRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEME 83
Query: 193 DKENAEKALLRHKEKIGHRLVTL 215
+++ +KAL +H+ +G R V +
Sbjct: 84 SEQDVQKALEKHRMYMGQRYVEV 106
>gi|355749346|gb|EHH53745.1| hypothetical protein EGM_14439, partial [Macaca fascicularis]
Length = 362
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 64 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 115
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 116 -----------------------------------ALMKSLQVKSSPVVNDGVVRLRGLP 140
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 141 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 198
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 199 RYIEIFPS 206
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 18/211 (8%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++
Sbjct: 151 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 210
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRR-------AKRSEMDWALKRQ--- 131
+ G G + S+P I + A SE + L ++
Sbjct: 211 VRTHVGSHKGK--KITSSPTAKYITEPEMVFEEHEVNEDIRPMTAFESEKEIELPKEVPE 268
Query: 132 ---GAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAY 188
A G+ Q + ++GLP++ +D+ F L+ P IT+ + +G+ TG A
Sbjct: 269 KLPEAADFGTTSSQHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEAD 326
Query: 189 IQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+ F E+A A+L+ + + HR + L ++
Sbjct: 327 VHFETHEDAVAAMLKDRSHVHHRYIELFLNS 357
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 301 NFFAPLKPVRITMEYSSSGKATGEADVHFETHEDAVAAMLKDRSHVHHRYIELFL 355
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 135 LSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFV 192
L D +R QGLP+ C EDV F I NGI + G+ G A I+
Sbjct: 24 LEEEVDDVYLIRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEME 83
Query: 193 DKENAEKALLRHKEKIGHRLVTL 215
+++ +KAL +H+ +G R V +
Sbjct: 84 SEQDVQKALEKHRMYMGQRYVEV 106
>gi|355687360|gb|EHH25944.1| G-rich sequence factor 1, partial [Macaca mulatta]
Length = 362
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 64 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 115
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 116 -----------------------------------ALMKSLQVKSSPVVNDGVVRLRGLP 140
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 141 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 198
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 199 RYIEIFPS 206
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++
Sbjct: 151 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 210
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRR-------AKRSEMDWALKRQ--- 131
+ G G + S+P I + A SE + L ++
Sbjct: 211 VRTHVGSHKGK--KITSSPTAKYITEPEMVFEEHEVNEDIRPMTAFESEKEIELPKEVPE 268
Query: 132 ---GAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAY 188
A G+ + ++GLP++ +D+ F L+ P IT+ + +G+ TG A
Sbjct: 269 KLPEAADFGTTSSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEAD 326
Query: 189 IQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+ F E+A A+L+ + + HR + L ++
Sbjct: 327 VHFETHEDAVAAMLKDRSHVHHRYIELFLNS 357
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 301 NFFAPLKPVRITMEYSSSGKATGEADVHFETHEDAVAAMLKDRSHVHHRYIELFL 355
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 135 LSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFV 192
L D +R QGLP+ C EDV F I NGI + G+ G A I+
Sbjct: 24 LEEEVDDVYLIRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEME 83
Query: 193 DKENAEKALLRHKEKIGHRLVTL 215
+++ +KAL +H+ +G R V +
Sbjct: 84 SEQDVQKALEKHRMYMGQRYVEV 106
>gi|517196|gb|AAC95399.1| G-rich sequence factor-1 [Homo sapiens]
Length = 424
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 126 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 177
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 178 -----------------------------------ALMKSLQVKSSPVVNDGVVRLRGLP 202
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 203 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 260
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 261 RYIEIFPS 268
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 14/209 (6%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY----ME 77
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++ E
Sbjct: 213 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 272
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWM-RRAKRSEMDWALKRQ----- 131
T G+ F K +F + + A SE + L ++
Sbjct: 273 VRTHVGSYKGKKIASFPTAKYITEPEMVFEEHEVNEVFQPMTAFESEKEIELPKEVPEKL 332
Query: 132 -GAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
A G+ + ++GLP++ +D+ F L+ P IT+ + +G+ TG A +
Sbjct: 333 PEAADFGTTSSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEADVH 390
Query: 191 FVDKENAEKALLRHKEKIGHRLVTLVMSG 219
F E+A A+L+ + + HR + L ++
Sbjct: 391 FETHEDAVAAMLKDRSHVHHRYIELFLNS 419
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 363 NFFAPLKPVRITMEYSSSGKATGEADVHFETHEDAVAAMLKDRSHVHHRYIELFL 417
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAE 198
D +R QGLP+ C EDV F I NGI + G+ G A I+ +++ +
Sbjct: 92 DVFLIRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQ 151
Query: 199 KALLRHKEKIGHRLVTL 215
KAL +H+ +G R V +
Sbjct: 152 KALEKHRMYMGQRYVEV 168
>gi|90084329|dbj|BAE91006.1| unnamed protein product [Macaca fascicularis]
Length = 318
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 20 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 71
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 72 -----------------------------------ALMKSLQVKSSPVVNDGVVRLRGLP 96
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 97 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 154
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 155 RYIEIFPS 162
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 95/210 (45%), Gaps = 18/210 (8%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++
Sbjct: 107 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 166
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRR-------AKRSEMDWALKRQ--- 131
+ G G + S+P I + A SE + L ++
Sbjct: 167 VRTHVGSHKGK--KITSSPTAKYITEPEMVFEEHEVNEDIRPMTAFESEKEIELPKEVPE 224
Query: 132 ---GAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAY 188
A G+ + ++GLP++ +D+ F L+ P IT+ + +G+ TG A
Sbjct: 225 KLPEAADFGTTSSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEAD 282
Query: 189 IQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+ F E+A A+L+ + + HR + L ++
Sbjct: 283 VHFETHEDAVAAMLKDRSHVHHRYIELFLN 312
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 257 NFFAPLKPVRITMEYSSSGKATGEADVHFETHEDAVAAMLKDRSHVHHRYIELFL 311
>gi|149193319|ref|NP_001091947.1| G-rich sequence factor 1 isoform 2 [Homo sapiens]
gi|119626036|gb|EAX05631.1| G-rich RNA sequence binding factor 1, isoform CRA_a [Homo sapiens]
gi|119626037|gb|EAX05632.1| G-rich RNA sequence binding factor 1, isoform CRA_a [Homo sapiens]
gi|119626038|gb|EAX05633.1| G-rich RNA sequence binding factor 1, isoform CRA_a [Homo sapiens]
gi|193786999|dbj|BAG51822.1| unnamed protein product [Homo sapiens]
gi|193787731|dbj|BAG52934.1| unnamed protein product [Homo sapiens]
gi|193788237|dbj|BAG53131.1| unnamed protein product [Homo sapiens]
gi|193788520|dbj|BAG53414.1| unnamed protein product [Homo sapiens]
Length = 318
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 20 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 71
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 72 -----------------------------------ALMKSLQVKSSPVVNDGVVRLRGLP 96
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 97 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 154
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 155 RYIEIFPS 162
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY----ME 77
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++ E
Sbjct: 107 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 166
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWM-RRAKRSEMDWALKRQ----- 131
T G+ F K +F + A SE + L ++
Sbjct: 167 VRTHVGSYKGKKIASFPTAKYITEPEMVFEEHEVNEDIQPMTAFESEKEIELPKEVPEKL 226
Query: 132 -GAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
A G+ + ++GLP++ +D+ F L+ P IT+ + +G+ TG A +
Sbjct: 227 PEAADFGTTSSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEADVH 284
Query: 191 FVDKENAEKALLRHKEKIGHRLVTLVMS 218
F E+A A+L+ + + HR + L ++
Sbjct: 285 FETHEDAVAAMLKDRSHVHHRYIELFLN 312
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 257 NFFAPLKPVRITMEYSSSGKATGEADVHFETHEDAVAAMLKDRSHVHHRYIELFL 311
>gi|170592721|ref|XP_001901113.1| Heterogeneous nuclear ribonucleoprotein H' [Brugia malayi]
gi|158591180|gb|EDP29793.1| Heterogeneous nuclear ribonucleoprotein H', putative [Brugia
malayi]
Length = 385
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 91/193 (47%), Gaps = 44/193 (22%)
Query: 30 VNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRG 89
I L D GR+SGE V FSS +D AL + K +G RY+EL + SS E
Sbjct: 34 TQIKLTKDRDGRASGEGFVVFSSREDYDFALTKDKKYIGKRYVEL---QQVSSME----- 85
Query: 90 TGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS---AVDQCCMR 146
S+ D + +R G L+ A + +R
Sbjct: 86 --------------------------------SDYDDSDRRYGGSLADPNLPARETSIVR 113
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHD-YAGRCTGVAYIQFVDKENAEKALLRHK 205
L GLPY C KE++ +F E LEI GI + +D Y+G+ G A++ F+D E+A KAL ++K
Sbjct: 114 LAGLPYGCTKEEIVRFFEPLEIADRGIVMTYDRYSGKPKGEAFVAFIDDESASKALAKNK 173
Query: 206 EKIGHRLVTLVMS 218
E I HR V + S
Sbjct: 174 EYIQHRYVDIYPS 186
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 22 QFFKPIVPVNILLLTD-DAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
FF+P+ P +I +L + R SGEA VEF + D A+QR+++ MG RY+EL E+
Sbjct: 328 DFFQPLRPASIDVLYEYGTDRPSGEAIVEFRNRADFDAAMQRNRNYMGSRYVELIPEQ 385
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
M+ +GLP+ C ++D+ +F I + D GR +G ++ F +E+ + AL +
Sbjct: 8 MKCRGLPWSCTEDDLREFFGEAARSITQIKLTKDRDGRASGEGFVVFSSREDYDFALTKD 67
Query: 205 KEKIGHRLVTL 215
K+ IG R V L
Sbjct: 68 KKYIGKRYVEL 78
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYA-GRCTGVAYIQFVDKENAEKA 200
+ C+R++GLPY + D+ F + L P I + ++Y R +G A ++F ++ + + A
Sbjct: 309 EYCIRMRGLPYRATERDIIDFFQPLR--PASIDVLYEYGTDRPSGEAIVEFRNRADFDAA 366
Query: 201 LLRHKEKIGHRLVTLV 216
+ R++ +G R V L+
Sbjct: 367 MQRNRNYMGSRYVELI 382
>gi|403281341|ref|XP_003945266.1| PREDICTED: LOW QUALITY PROTEIN: G-rich sequence factor 1 [Saimiri
boliviensis boliviensis]
Length = 439
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 87/187 (46%), Gaps = 46/187 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 183 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRLYMGQRYVEVY--------EINNEDVD 234
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 235 -----------------------------------ALMKSLQVKSSPVVNDGVVRLRGLP 259
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 260 YSCNEKDIIDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 317
Query: 211 RLVTLVM 217
R V ++
Sbjct: 318 RXVKQIL 324
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 378 NFFAPLKPVRITMEYSSSGKATGEADVHFETHEDAVAAMLKDRSHVHHRYIELFL 432
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 86/197 (43%), Gaps = 34/197 (17%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+R ++ +
Sbjct: 270 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRXVKQILM---- 325
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
++ Y ++ ++ + K A G+
Sbjct: 326 --------------MRKCHYD-------------LKSGEKLPKEVPEKLPEAADFGTTPC 358
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ ++GLP++ +D+ F L+ P IT+ + +G+ TG A + F E+A A+
Sbjct: 359 LHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEADVHFETHEDAVAAM 416
Query: 202 LRHKEKIGHRLVTLVMS 218
L+ + + HR + L ++
Sbjct: 417 LKDRSHVHHRYIELFLN 433
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAE 198
D +R QGLP+ C EDV F I NGI + G+ G A I+ +++ +
Sbjct: 149 DVYLIRAQGLPWSCTIEDVLNFFSDCRIRNGQNGIHFLLNRDGKRRGDALIEMESEQDVQ 208
Query: 199 KALLRHKEKIGHRLVTL 215
KAL +H+ +G R V +
Sbjct: 209 KALEKHRLYMGQRYVEV 225
>gi|215274142|sp|Q12849.3|GRSF1_HUMAN RecName: Full=G-rich sequence factor 1; Short=GRSF-1
Length = 480
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 182 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 233
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 234 -----------------------------------ALMKSLQVKSSPVVNDGVVRLRGLP 258
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 259 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 316
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 317 RYIEIFPS 324
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY----ME 77
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++ E
Sbjct: 269 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 328
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWM-RRAKRSEMDWALKRQ----- 131
T G+ F K +F + A SE + L ++
Sbjct: 329 VRTHVGSYKGKKIASFPTAKYITEPEMVFEEHEVNEDIQPMTAFESEKEIELPKEVPEKL 388
Query: 132 -GAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
A G+ + ++GLP++ +D+ F L+ P IT+ + +G+ TG A +
Sbjct: 389 PEAADFGTTSSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEADVH 446
Query: 191 FVDKENAEKALLRHKEKIGHRLVTLVMS 218
F E+A A+L+ + + HR + L ++
Sbjct: 447 FETHEDAVAAMLKDRSHVHHRYIELFLN 474
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 419 NFFAPLKPVRITMEYSSSGKATGEADVHFETHEDAVAAMLKDRSHVHHRYIELFL 473
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAE 198
D +R QGLP+ C EDV F I NGI + G+ G A I+ +++ +
Sbjct: 148 DVFLIRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQ 207
Query: 199 KALLRHKEKIGHRLVTL 215
KAL +H+ +G R V +
Sbjct: 208 KALEKHRMYMGQRYVEV 224
>gi|73975377|ref|XP_532402.2| PREDICTED: G-rich sequence factor 1 [Canis lupus familiaris]
Length = 372
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 74 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 125
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 126 -----------------------------------ALMKSLQVKSSPVVNDGVVRLRGLP 150
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 151 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 208
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 209 RYIEIFPS 216
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 22/213 (10%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++ S
Sbjct: 161 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIF----PS 216
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRR---------AKRSEMDWALKRQ- 131
+ G G K + +A A SE + L ++
Sbjct: 217 RRNEVRTHVGSHKGKKMASSPTAKYITEPEMAFEEHEVNEDIRPMTAFESEKEIELPKEM 276
Query: 132 -----GAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGV 186
AV G+ + ++GLP++ +D+ F L+ P IT+ + G+ TG
Sbjct: 277 SEKLPEAVDFGATSSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSNGKATGE 334
Query: 187 AYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
A + F E+A A+L+ + + HR + L ++
Sbjct: 335 ADVHFDTHEDAVAAMLKDRSHVHHRYIELFLNS 367
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 311 NFFAPLKPVRITMEYSSNGKATGEADVHFDTHEDAVAAMLKDRSHVHHRYIELFL 365
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 137 GSAVDQC-CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVD 193
G VD +R QGLP+ C EDV F I NGI + G+ G A I+
Sbjct: 35 GEEVDDVYLIRAQGLPWSCTIEDVVNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMES 94
Query: 194 KENAEKALLRHKEKIGHRLVTL 215
+++ +KAL +H+ +G R V +
Sbjct: 95 EQDVQKALEKHRMYMGQRYVEV 116
>gi|380812104|gb|AFE77927.1| G-rich sequence factor 1 isoform 1 [Macaca mulatta]
gi|380812106|gb|AFE77928.1| G-rich sequence factor 1 isoform 1 [Macaca mulatta]
Length = 479
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 181 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 232
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 233 -----------------------------------ALMKSLQVKSSPVVNDGVVRLRGLP 257
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 258 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 315
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 316 RYIEIFPS 323
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 95/210 (45%), Gaps = 18/210 (8%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++
Sbjct: 268 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 327
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRR-------AKRSEMDWALKRQ--- 131
+ G G + S+P I + A SE + L ++
Sbjct: 328 VRTHVGSHKGK--KITSSPTAKYITEPEMVFEEHEVNEDIRPMTAFESEKEIELPKEVPE 385
Query: 132 ---GAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAY 188
A G+ + ++GLP++ +D+ F L+ P IT+ + +G+ TG A
Sbjct: 386 KLPEAADFGTTSSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEAD 443
Query: 189 IQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+ F E+A A+L+ + + HR + L ++
Sbjct: 444 VHFETHEDAVAAMLKDRSHVHHRYIELFLN 473
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 418 NFFAPLKPVRITMEYSSSGKATGEADVHFETHEDAVAAMLKDRSHVHHRYIELFL 472
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAE 198
D +R QGLP+ C EDV F I NGI + G+ G A I+ +++ +
Sbjct: 147 DVYLIRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQ 206
Query: 199 KALLRHKEKIGHRLVTL 215
KAL +H+ +G R V +
Sbjct: 207 KALEKHRMYMGQRYVEV 223
>gi|193786243|dbj|BAG51526.1| unnamed protein product [Homo sapiens]
Length = 412
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 114 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 165
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 166 -----------------------------------ALMKSLQVKSSPVVNDGVVRLRGLP 190
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 191 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 248
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 249 RYIEIFPS 256
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY----ME 77
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++ E
Sbjct: 201 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 260
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWM-RRAKRSEMDWALKRQ----- 131
T G+ F K +F + A SE + L ++
Sbjct: 261 VRTHVGSYKGKKIASFPTAKYITEPEMVFEEHEVNEDIQPMTAFESEKEIELPKEVPEKL 320
Query: 132 -GAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
A G+ + ++GLP++ +D+ F L+ P IT+ + +G+ TG A +
Sbjct: 321 PEAADFGTTSSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEADVH 378
Query: 191 FVDKENAEKALLRHKEKIGHRLVTLVMS 218
F E+A A+L+ + + HR + L ++
Sbjct: 379 FETHEDAVAAMLKDRSHVHHRYIELFLN 406
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 351 NFFAPLKPVRITMEYSSSGKATGEADVHFETHEDAVAAMLKDRSHVHHRYIELFL 405
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAE 198
D +R QGLP+ C EDV F I NGI + G+ G A I+ +++ +
Sbjct: 80 DVFLIRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQ 139
Query: 199 KALLRHKEKIGHRLVTL 215
KAL +H+ +G R V +
Sbjct: 140 KALEKHRMYMGQRYVEV 156
>gi|281347672|gb|EFB23256.1| hypothetical protein PANDA_008197 [Ailuropoda melanoleuca]
Length = 362
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 64 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 115
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 116 -----------------------------------ALMKSLQVKSSPVVNDGVVRLRGLP 140
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 141 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 198
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 199 RYIEIFPS 206
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++
Sbjct: 151 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 210
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRR-------AKRSEMDWALKRQ--- 131
+ G G + S+P I + A SE + L ++
Sbjct: 211 VRTHVGSHKGK--KMSSSPTAKYITEPEMVFEEHEVNEDIRPMTAFESEKEIELPKEMSE 268
Query: 132 ---GAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAY 188
AV G+ + ++GLP++ +D+ F L+ P IT+ + G+ TG A
Sbjct: 269 KLPEAVDFGTTSSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSNGKATGEAD 326
Query: 189 IQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+ F E+A A+L+ + + HR + L ++
Sbjct: 327 VHFDTHEDAVAAMLKDRSHVHHRYIELFLNS 357
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 301 NFFAPLKPVRITMEYSSNGKATGEADVHFDTHEDAVAAMLKDRSHVHHRYIELFL 355
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 137 GSAVDQC-CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVD 193
G VD +R QGLP+ C EDV F I NGI + G+ G A I+
Sbjct: 25 GEEVDDVYLIRAQGLPWSCTIEDVVNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMES 84
Query: 194 KENAEKALLRHKEKIGHRLVTL 215
+++ +KAL +H+ +G R V +
Sbjct: 85 EQDVQKALEKHRMYMGQRYVEV 106
>gi|21748975|dbj|BAC03513.1| unnamed protein product [Homo sapiens]
Length = 415
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 117 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 168
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 169 -----------------------------------ALMKSLQVKSSPVVNDGVVRLRGLP 193
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 194 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 251
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 252 RYIEIFPS 259
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY----ME 77
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++ E
Sbjct: 204 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 263
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWM-RRAKRSEMDWALKRQ----- 131
T G+ F K +F + A SE + L ++
Sbjct: 264 VRTHVGSYKGKKIASFPTAKYITEPEMVFEEHEVNEDIQPMTAFESEKEIELPKEVPEKL 323
Query: 132 -GAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
A G+ + ++GLP++ +D+ F L+ P IT+ + +G+ TG A +
Sbjct: 324 PEAADFGTTSSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEADVH 381
Query: 191 FVDKENAEKALLRHKEKIGHRLVTLVMS 218
F E+A A+L+ + + HR + L ++
Sbjct: 382 FETHEDAVAAMLKDRSHVHHRYIELFLN 409
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 354 NFFAPLKPVRITMEYSSSGKATGEADVHFETHEDAVAAMLKDRSHVHHRYIELFL 408
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAE 198
D +R QGLP+ C EDV F I NGI + G+ G A I+ +++ +
Sbjct: 83 DVFLIRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQ 142
Query: 199 KALLRHKEKIGHRLVTL 215
KAL +H+ +G R V +
Sbjct: 143 KALEKHRMYMGQRYVEV 159
>gi|63991866|gb|AAY40942.1| unknown [Homo sapiens]
gi|119626039|gb|EAX05634.1| G-rich RNA sequence binding factor 1, isoform CRA_b [Homo sapiens]
Length = 435
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 182 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 233
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 234 -----------------------------------ALMKSLQVKSSPVVNDGVVRLRGLP 258
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 259 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 316
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 317 RYIEIFPS 324
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAE 198
D +R QGLP+ C EDV F I NGI + G+ G A I+ +++ +
Sbjct: 148 DVFLIRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQ 207
Query: 199 KALLRHKEKIGHRLVTL 215
KAL +H+ +G R V +
Sbjct: 208 KALEKHRMYMGQRYVEV 224
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++
Sbjct: 269 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIF 322
>gi|338723562|ref|XP_001489151.2| PREDICTED: g-rich sequence factor 1 [Equus caballus]
Length = 362
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 64 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 115
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 116 -----------------------------------ALMKSLQVKSSPVVNDGVVRLRGLP 140
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 141 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMASQALLKHREEIGN 198
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 199 RYIEIFPS 206
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 97/222 (43%), Gaps = 40/222 (18%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++ S
Sbjct: 151 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMASQALLKHREEIGNRYIEIF----PS 206
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRR------------------AKRSE 123
+ G G K S AK++ A SE
Sbjct: 207 RRNEVRTHVGSHKGKK---------MASSLTAKYITEPEMVFEEHEVNEDIRPMTAFESE 257
Query: 124 MDWALKRQGA------VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPH 177
+ L ++ + G+A + ++GLP++ +D+ F L+ P IT+ +
Sbjct: 258 KEVELPKEMSEKLPETADFGTASSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEY 315
Query: 178 DYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+G+ TG A + F E+A A+L+ + + HR + L ++
Sbjct: 316 SSSGKATGEADVHFDTHEDAVAAMLKDRSHVHHRYIELFLNS 357
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 301 NFFAPLKPVRITMEYSSSGKATGEADVHFDTHEDAVAAMLKDRSHVHHRYIELFL 355
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 137 GSAVDQC-CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVD 193
G VD +R QGLP+ C EDV F I NGI + G+ G A I+
Sbjct: 25 GQDVDDVYLIRAQGLPWSCTIEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMES 84
Query: 194 KENAEKALLRHKEKIGHRLVTL 215
+++ +KAL +H+ +G R V +
Sbjct: 85 EQDVQKALEKHRMYMGQRYVEV 106
>gi|349603147|gb|AEP99067.1| G-rich sequence factor 1-like protein, partial [Equus caballus]
Length = 361
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 63 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 114
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 115 -----------------------------------ALMKSLQVKSSPVVNDGVVRLRGLP 139
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 140 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMASQALLKHREEIGN 197
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 198 RYIEIFPS 205
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 97/222 (43%), Gaps = 40/222 (18%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++ S
Sbjct: 150 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMASQALLKHREEIGNRYIEIF----PS 205
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRR------------------AKRSE 123
+ G G K S AK++ A SE
Sbjct: 206 RRNEVRTHVGSHKGKK---------MASSLTAKYITEPEMVFEEHEVNEDIRPMTAFESE 256
Query: 124 MDWALKRQGA------VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPH 177
+ L ++ + G+A + ++GLP++ +D+ F L+ P IT+ +
Sbjct: 257 KEVELPKEMSEKLPETADFGTASSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEY 314
Query: 178 DYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+G+ TG A + F E+A A+L+ + + HR + L ++
Sbjct: 315 SSSGKATGEADVHFDTHEDAVAAMLKDRSHVHHRYIELFLNS 356
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 300 NFFAPLKPVRITMEYSSSGKATGEADVHFDTHEDAVAAMLKDRSHVHHRYIELFL 354
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 137 GSAVDQC-CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVD 193
G VD +R QGLP+ C EDV F I NGI + G+ G A I+
Sbjct: 24 GQDVDDVYLIRAQGLPWSCTIEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMES 83
Query: 194 KENAEKALLRHKEKIGHRLVTL 215
+++ +KAL +H+ +G R V +
Sbjct: 84 EQDVQKALEKHRMYMGQRYVEV 105
>gi|149193321|ref|NP_002083.3| G-rich sequence factor 1 isoform 1 [Homo sapiens]
Length = 480
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 182 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 233
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 234 -----------------------------------ALMKSLQVKSSPVVNDGVVRLRGLP 258
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 259 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 316
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 317 RYIEIFPS 324
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY----ME 77
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++ E
Sbjct: 269 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 328
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWM-RRAKRSEMDWALKRQ----- 131
T G+ F K +F + A SE + L ++
Sbjct: 329 VRTHVGSYKGKKIASFPTAKYITEPEMVFEEHEVNEDIQPMTAFESEKEIELPKEVPEKL 388
Query: 132 -GAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
A G+ + ++GLP++ +D+ F L+ P IT+ + +G+ TG A +
Sbjct: 389 PEAADFGTTSSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEADVH 446
Query: 191 FVDKENAEKALLRHKEKIGHRLVTLVMS 218
F E+A A+L+ + + HR + L ++
Sbjct: 447 FETHEDAVAAMLKDRSHVHHRYIELFLN 474
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 419 NFFAPLKPVRITMEYSSSGKATGEADVHFETHEDAVAAMLKDRSHVHHRYIELFL 473
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAE 198
D +R QGLP+ C EDV F I NGI + G+ G A I+ +++ +
Sbjct: 148 DVFLIRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQ 207
Query: 199 KALLRHKEKIGHRLVTL 215
KAL +H+ +G R V +
Sbjct: 208 KALEKHRMYMGQRYVEV 224
>gi|402869627|ref|XP_003898853.1| PREDICTED: G-rich sequence factor 1 [Papio anubis]
Length = 606
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 283 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 334
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 335 -----------------------------------ALMKSLQVKSSPVVNDGVVRLRGLP 359
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 360 YSCNEKDIVDFFAGLHIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 417
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 418 RYIEIFPS 425
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 91/204 (44%), Gaps = 18/204 (8%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++
Sbjct: 370 FFAGLHIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 429
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRR-------AKRSEMDWALKRQGAV 134
+ G G + S+P I + A +E + L ++
Sbjct: 430 VRTHVGSHKGK--KIASSPTAKYITEPEMVFEEHEVNEDIRPMTAFENEKEIELPKEVPE 487
Query: 135 LSGSAVDQCCM------RLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAY 188
A D M ++GLP++ +D+ F L+ P IT+ + +G+ TG A
Sbjct: 488 KLPEAADFGTMSSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEAD 545
Query: 189 IQFVDKENAEKALLRHKEKIGHRL 212
+ F E+A A+L+ + + HR+
Sbjct: 546 VHFETHEDAVAAMLKDRSHVHHRV 569
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAE 198
D +R QGLP+ C EDV F I NGI + G+ G A I+ +++ +
Sbjct: 249 DVYLIRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQ 308
Query: 199 KALLRHKEKIGHRLVTL 215
KAL +H+ +G R V +
Sbjct: 309 KALEKHRMYMGQRYVEV 325
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDR------YIELY 75
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ R ++ ++
Sbjct: 520 NFFAPLKPVRITMEYSSSGKATGEADVHFETHEDAVAAMLKDRSHVHHRVKQEAFHLHIF 579
Query: 76 MEEGTSS 82
+ G SS
Sbjct: 580 LGRGISS 586
>gi|332819574|ref|XP_526590.3| PREDICTED: G-rich sequence factor 1 [Pan troglodytes]
Length = 547
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 264 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 315
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 316 -----------------------------------ALMKSLQVKSSPVVNDGVVRLRGLP 340
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 341 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 398
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 399 RYIEIFPS 406
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 32/207 (15%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++ S
Sbjct: 351 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIF----PS 406
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS----- 136
+ G + G K + F ++++ + + E++ ++ A S
Sbjct: 407 RRNEVRTHVGSYKGKK-----IASFPTAKYITEPEMVFEEHEVNEDIQPMTAFESEKEIE 461
Query: 137 ---------------GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAG 181
G+A + ++GLP++ +D+ F L+ P IT+ + +G
Sbjct: 462 LPKEVPEKLPEAADFGTASSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSG 519
Query: 182 RCTGVAYIQFVDKENAEKALLRHKEKI 208
+ TG A + F E+A A+L+ + +
Sbjct: 520 KATGEADVHFETHEDAVAAMLKDRSHV 546
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAE 198
D +R QGLP+ C EDV F I NGI + G+ G A I+ +++ +
Sbjct: 230 DVFLIRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQ 289
Query: 199 KALLRHKEKIGHRLVTL 215
KAL +H+ +G R V +
Sbjct: 290 KALEKHRMYMGQRYVEV 306
>gi|388452478|ref|NP_001253931.1| G-rich sequence factor 1 [Macaca mulatta]
gi|383417775|gb|AFH32101.1| G-rich sequence factor 1 isoform 1 [Macaca mulatta]
Length = 479
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 181 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 232
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 233 -----------------------------------ALMKSLQVKSSPVVNDGVVRLRGLP 257
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 258 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 315
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 316 RYIEIFPS 323
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 95/210 (45%), Gaps = 18/210 (8%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++
Sbjct: 268 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 327
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRR-------AKRSEMDWALKRQ--- 131
+ G G + S+P I + A SE + L ++
Sbjct: 328 VRTHVGSHKGK--KITSSPTAKYITEPEMVFEEHEVNEDIRPMTAFESEKEIELPKEVPE 385
Query: 132 ---GAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAY 188
A G+ + ++GLP++ +D+ F L+ P IT+ + +G+ TG A
Sbjct: 386 KLPEAADFGTTSSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEAD 443
Query: 189 IQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+ F E+A A+L+ + + HR + L ++
Sbjct: 444 VHFETHEDAVAAMLKDRSHVHHRYIELFLN 473
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 418 NFFAPLKPVRITMEYSSSGKATGEADVHFETHEDAVAAMLKDRSHVHHRYIELFL 472
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAE 198
D +R QGLP+ C EDV F I NGI + G+ G A I+ +++ +
Sbjct: 147 DVYLIRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQ 206
Query: 199 KALLRHKEKIGHRLVTL 215
KAL +H+ +G R V +
Sbjct: 207 KALEKHRMYMGQRYVEV 223
>gi|410227596|gb|JAA11017.1| G-rich RNA sequence binding factor 1 [Pan troglodytes]
gi|410268188|gb|JAA22060.1| G-rich RNA sequence binding factor 1 [Pan troglodytes]
gi|410306352|gb|JAA31776.1| G-rich RNA sequence binding factor 1 [Pan troglodytes]
gi|410306354|gb|JAA31777.1| G-rich RNA sequence binding factor 1 [Pan troglodytes]
gi|410360388|gb|JAA44703.1| G-rich RNA sequence binding factor 1 [Pan troglodytes]
gi|410360390|gb|JAA44704.1| G-rich RNA sequence binding factor 1 [Pan troglodytes]
Length = 481
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 183 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 234
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 235 -----------------------------------ALMKSLQVKSSPVVNDGVVRLRGLP 259
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 260 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 317
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 318 RYIEIFPS 325
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 14/208 (6%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY----ME 77
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++ E
Sbjct: 270 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 329
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWM-RRAKRSEMDWALKRQ----- 131
T G+ F K +F + A SE + L ++
Sbjct: 330 VRTHVGSYKGKKIASFPTAKYITEPEMVFEEHEVNEDIQPMTAFESEKEIELPKEVPEKL 389
Query: 132 -GAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
A G+A + ++GLP++ +D+ F L+ P IT+ + +G+ TG A +
Sbjct: 390 PEAADFGTASSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEADVH 447
Query: 191 FVDKENAEKALLRHKEKIGHRLVTLVMS 218
F E+A A+L+ + + HR + L ++
Sbjct: 448 FETHEDAVAAMLKDRSHVHHRYIELFLN 475
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 420 NFFAPLKPVRITMEYSSSGKATGEADVHFETHEDAVAAMLKDRSHVHHRYIELFL 474
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAE 198
D +R QGLP+ C EDV F I NGI + G+ G A I+ +++ +
Sbjct: 149 DVFLIRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQ 208
Query: 199 KALLRHKEKIGHRLVTL 215
KAL +H+ +G R V +
Sbjct: 209 KALEKHRMYMGQRYVEV 225
>gi|193784859|dbj|BAG54012.1| unnamed protein product [Homo sapiens]
Length = 459
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 161 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 212
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 213 -----------------------------------ALMKSLQVKSSPVVNDGVVRLRGLP 237
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 238 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 295
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 296 RYIEIFPS 303
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY----ME 77
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++ E
Sbjct: 248 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 307
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWM-RRAKRSEMDWALKRQ----- 131
T G+ F K +F + A SE + L ++
Sbjct: 308 VRTHVGSYKGKKIASFPTAKYITEPEMVFEEHEVNEDIQPMTAFESEKEIELPKEVPEKL 367
Query: 132 -GAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
A G+ + ++GLP++ +D+ F L+ P IT+ + +G+ TG A +
Sbjct: 368 PEAADFGTTSSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEADVH 425
Query: 191 FVDKENAEKALLRHKEKIGHRLVTLVMS 218
F E+A A+L+ + + HR + L ++
Sbjct: 426 FETHEDAVAAMLKDRSHVHHRYIELFLN 453
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 398 NFFAPLKPVRITMEYSSSGKATGEADVHFETHEDAVAAMLKDRSHVHHRYIELFL 452
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAE 198
D +R QGLP+ C EDV F I NGI + G+ G A I+ +++ +
Sbjct: 127 DVFLIRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQ 186
Query: 199 KALLRHKEKIGHRLVTL 215
KAL +H+ +G R V +
Sbjct: 187 KALEKHRMYMGQRYVEV 203
>gi|354495968|ref|XP_003510100.1| PREDICTED: G-rich sequence factor 1-like [Cricetulus griseus]
Length = 457
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 159 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 210
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 211 -----------------------------------ALMKSLHVKSSPMVNDGVVRLRGLP 235
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 236 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 293
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 294 RYIEIFPS 301
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 97/222 (43%), Gaps = 40/222 (18%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++
Sbjct: 246 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIF-----P 300
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRR------------------AKRSE 123
S+ R G K +S AK++ A S+
Sbjct: 301 SRRNEVRTHVGSHKAKKM--------VSSPTAKYITEPEVVFEEHEVNEDIRPMTAFESD 352
Query: 124 MDWALKRQGAVLSGSAVDQCCM------RLQGLPYECKKEDVEKFLEGLEIVPNGITIPH 177
+ L ++ + VD M ++GLP++ +D+ F L+ P IT+ +
Sbjct: 353 KEIELPKEMSEKLPETVDFGSMPSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEY 410
Query: 178 DYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+G+ TG A + F E+A A+L+ + + HR + L ++
Sbjct: 411 SSSGKATGEADVHFDTHEDAVAAMLKDRSHVQHRYIELFLNS 452
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 396 NFFAPLKPVRITMEYSSSGKATGEADVHFDTHEDAVAAMLKDRSHVQHRYIELFL 450
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 137 GSAVDQC-CMRLQGLPYECKKEDVEKFLEGLEI--VPNGITIPHDYAGRCTGVAYIQFVD 193
G VD +R QGLP+ C EDV F I NGI + G+ G A I+
Sbjct: 120 GQEVDDVYLIRAQGLPWSCTVEDVLNFFSDCRIRNSENGIHFLLNRDGKRRGDALIEMES 179
Query: 194 KENAEKALLRHKEKIGHRLVTL 215
+++ +KAL +H+ +G R V +
Sbjct: 180 EQDVQKALEKHRMYMGQRYVEV 201
>gi|348513989|ref|XP_003444523.1| PREDICTED: G-rich sequence factor 1-like [Oreochromis niloticus]
Length = 400
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 84/187 (44%), Gaps = 46/187 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L D GR SG A +E +D +AL++H+ +G RY+E+Y ++ + T
Sbjct: 126 IHLTLDRLGRPSGRAFIEMEHEEDVSKALEKHRQYLGPRYVEVYEVTNGDAEAILKKATQ 185
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
G G VL L+GLP
Sbjct: 186 PLGA-----------------------------------DGVVL-----------LRGLP 199
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C ++D+ F GLEI NGIT+ D GR +GVAY+QF +E A++AL R +E IG+R
Sbjct: 200 FTCTEDDIVHFFSGLEITENGITMVTDSRGRKSGVAYVQFTSQEAADEALQRDREIIGNR 259
Query: 212 LVTLVMS 218
+ + S
Sbjct: 260 YIEVFPS 266
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 85/192 (44%), Gaps = 15/192 (7%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEAN 86
I I ++TD GR SG A V+F+S + A ALQR + +G+RYIE++
Sbjct: 216 ITENGITMVTDSRGRKSGVAYVQFTSQEAADEALQRDREIIGNRYIEVFPSRRDEIHSTW 275
Query: 87 GRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMR 146
GR T F +S P V RR+ A L S V +
Sbjct: 276 GRRTSPFSS-QSRPQSVD------------RRSAPENRSPASPPPSLHLQSSTVPLHYIH 322
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKE 206
++GLP++ ED+ KF L + + I I GR +G A + F +A A+ + +
Sbjct: 323 VRGLPFQASGEDIVKFFYPLAV--SKILIECGPDGRPSGEADVYFHCHRDAVAAMSKDRM 380
Query: 207 KIGHRLVTLVMS 218
IG R + L ++
Sbjct: 381 NIGERYIELFLN 392
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
+FF P+ IL+ GR SGEADV F DA A+ + + N+G+RYIEL++
Sbjct: 337 KFFYPLAVSKILIECGPDGRPSGEADVYFHCHRDAVAAMSKDRMNIGERYIELFL 391
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVP--NGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
++++GLP+ C +D+ +F I GI + D GR +G A+I+ +E+ KAL
Sbjct: 96 VQVKGLPWSCTTQDLLQFFSECRIRDGVKGIHLTLDRLGRPSGRAFIEMEHEEDVSKALE 155
Query: 203 RHKEKIGHRLVTL 215
+H++ +G R V +
Sbjct: 156 KHRQYLGPRYVEV 168
>gi|301768278|ref|XP_002919563.1| PREDICTED: g-rich sequence factor 1-like [Ailuropoda melanoleuca]
Length = 717
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 90/188 (47%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 419 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINN---- 466
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++D AL + V S V+ +RL+GLP
Sbjct: 467 ------------------------------EDVD-ALMKSLQVKSSPVVNDGVVRLRGLP 495
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 496 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 553
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 554 RYIEIFPS 561
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 18/210 (8%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++
Sbjct: 506 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 565
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRR-------AKRSEMDWALKRQ--- 131
+ G G + S+P I + A SE + L ++
Sbjct: 566 VRTHVGSHKGK--KMSSSPTAKYITEPEMVFEEHEVNEDIRPMTAFESEKEIELPKEMSE 623
Query: 132 ---GAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAY 188
AV G+ + ++GLP++ +D+ F L+ P IT+ + G+ TG A
Sbjct: 624 KLPEAVDFGTTSSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSNGKATGEAD 681
Query: 189 IQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+ F E+A A+L+ + + HR + L ++
Sbjct: 682 VHFDTHEDAVAAMLKDRSHVHHRYIELFLN 711
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 656 NFFAPLKPVRITMEYSSNGKATGEADVHFDTHEDAVAAMLKDRSHVHHRYIELFL 710
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 137 GSAVDQC-CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVD 193
G VD +R QGLP+ C EDV F I NGI + G+ G A I+
Sbjct: 380 GEEVDDVYLIRAQGLPWSCTIEDVVNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMES 439
Query: 194 KENAEKALLRHKEKIGHRLVTL 215
+++ +KAL +H+ +G R V +
Sbjct: 440 EQDVQKALEKHRMYMGQRYVEV 461
>gi|431900090|gb|ELK08023.1| G-rich sequence factor 1 [Pteropus alecto]
Length = 380
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 77 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 128
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 129 -----------------------------------ALMKNLQVKSSPVVNDGVVRLRGLP 153
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT D+ GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 154 YSCNEKDIVDFFAGLNIV--DITFVMDFRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 211
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 212 RYIEIFPS 219
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 18/200 (9%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++
Sbjct: 164 FFAGLNIVDITFVMDFRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 223
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIF-------------CISQFLAKWMRRAKRSEMDWAL 128
+ G G + S+P I I A + + +
Sbjct: 224 VRTHVGSHKG--KKIASSPTAKYITEPEVVFEEHEVNEDIQPMTAFESEKEIELPKEMSE 281
Query: 129 KRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAY 188
K AV G+ + ++GLP++ +D+ F L+ P IT+ + +G+ TG A
Sbjct: 282 KLPEAVDFGTTSSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEAD 339
Query: 189 IQFVDKENAEKALLRHKEKI 208
+ F E+A A+L+ + +
Sbjct: 340 VHFDTHEDAVAAMLKDRSHV 359
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 5/115 (4%)
Query: 106 FCISQFLAKWMRRAKRSEMDWALKR---QGAVLSGSAVDQCCMRLQGLPYECKKEDVEKF 162
F +QFL W + E L + L G D +R QGLP+ C EDV F
Sbjct: 5 FLTTQFLTLWESKTTYLEELPPLPEYELAPSKLGGEVDDVYLIRAQGLPWSCTVEDVLSF 64
Query: 163 LEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTL 215
I NGI + G+ G A I+ +++ +KAL +H+ +G R V +
Sbjct: 65 FSDCRIHNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEV 119
>gi|426231834|ref|XP_004009942.1| PREDICTED: G-rich sequence factor 1 [Ovis aries]
Length = 362
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 64 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 115
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 116 -----------------------------------ALMKSLHVKSAPVVNDGVVRLRGLP 140
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 141 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMASQALLKHREEIGN 198
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 199 RYIEIFPS 206
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++
Sbjct: 151 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMASQALLKHREEIGNRYIEIFPSRRNE 210
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIF-------------CISQFLAKWMRRAKRSEMDWAL 128
+ G G + S+P I I A + S + +
Sbjct: 211 VRTHVGSHKGK--KIASSPTAKYITEPEVVFEEHEVNEDIRPMTAFESEKEIESPKEMSE 268
Query: 129 KRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAY 188
K AV G+ + ++GLP++ +D+ F L+ P IT+ + +G+ TG A
Sbjct: 269 KLPEAVDFGTTSSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEAD 326
Query: 189 IQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+ F E+A A+L+ + + HR + L ++
Sbjct: 327 VHFDTHEDAVAAMLKDRSHVHHRYIELFLNS 357
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 301 NFFAPLKPVRITMEYSSSGKATGEADVHFDTHEDAVAAMLKDRSHVHHRYIELFL 355
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 137 GSAVDQC-CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVD 193
G VD +R QGLP+ C EDV F I NGI + G+ G A I+
Sbjct: 25 GEEVDDVYLIRAQGLPWSCTVEDVLSFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMES 84
Query: 194 KENAEKALLRHKEKIGHRLVTL 215
+++ +KAL +H+ +G R V +
Sbjct: 85 EQDVQKALEKHRMYMGQRYVEV 106
>gi|296196376|ref|XP_002745793.1| PREDICTED: G-rich sequence factor 1 [Callithrix jacchus]
Length = 479
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 181 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 232
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 233 -----------------------------------ALMKSLQVKSSPVVNDGVVRLRGLP 257
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 258 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 315
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 316 RYIEIFPS 323
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 18/210 (8%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++
Sbjct: 268 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 327
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRR-------AKRSEMDWALKRQGAV 134
+ G G + S+P I + A SE + L ++
Sbjct: 328 VRTHVGSHKGK--KMASSPTAKYITEPEMVFEEHEVNEDIRPMTAFESEKEIELPKEVPE 385
Query: 135 LSGSAVD---QCCMR---LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAY 188
A D C+ ++GLP++ +D+ F L+ P IT+ + +G+ TG A
Sbjct: 386 KLPEAADFGTTPCLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEAD 443
Query: 189 IQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+ F E+A A+L+ + + HR + L ++
Sbjct: 444 VHFETHEDAVAAMLKDRSHVHHRYIELFLN 473
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 418 NFFAPLKPVRITMEYSSSGKATGEADVHFETHEDAVAAMLKDRSHVHHRYIELFL 472
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 137 GSAVDQC-CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVD 193
G VD +R QGLP+ C EDV F I NGI + G+ G A I+
Sbjct: 142 GEEVDDVYLIRAQGLPWSCTIEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMES 201
Query: 194 KENAEKALLRHKEKIGHRLVTL 215
+++ +KAL +H+ +G R V +
Sbjct: 202 EQDVQKALEKHRMYMGQRYVEV 223
>gi|291401649|ref|XP_002717080.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like, partial
[Oryctolagus cuniculus]
Length = 482
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 184 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 235
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 236 -----------------------------------ALMKSLQVKSSPVVNDGVVRLRGLP 260
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 261 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 318
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 319 RYIEIFPS 326
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 14/208 (6%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++
Sbjct: 271 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 330
Query: 82 SKEANGRGTGGFGGVKSTPYGVG---IFCISQFLAKWMR--RAKRSEMDWALKRQGAVLS 136
+ G G T + + + + +R A SE + L ++ +
Sbjct: 331 VRTHVGSHKGKKMASSPTAKYITEPEVVFEEHEVNEDIRPITAFESEKEIELPKEMSEKL 390
Query: 137 GSAVDQCC------MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
AVD + ++GLP++ +D+ F L+ P IT+ + +G+ TG A +
Sbjct: 391 PEAVDLGTTPSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEADVH 448
Query: 191 FVDKENAEKALLRHKEKIGHRLVTLVMS 218
F E+A A+L+ + + HR + L ++
Sbjct: 449 FETHEDAVAAMLKDRSHVHHRYIELFLN 476
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 421 NFFAPLKPVRITMEYSSSGKATGEADVHFETHEDAVAAMLKDRSHVHHRYIELFL 475
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 18/118 (15%)
Query: 116 MRRAKRSEMDWALKRQGAVLS---------------GSAVDQC-CMRLQGLPYECKKEDV 159
+R A R E W + + L G VD +R QGLP+ C EDV
Sbjct: 109 LRGASRGESSWDSESKTTYLEDLPPLPEYELAPSKIGEEVDDVFLIRAQGLPWSCTVEDV 168
Query: 160 EKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTL 215
F I NGI + G+ G A I+ +++ +KAL +H+ +G R V +
Sbjct: 169 LSFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEV 226
>gi|151555768|gb|AAI49234.1| GRSF1 protein [Bos taurus]
Length = 362
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 64 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 115
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 116 -----------------------------------ALMKSLHVKSAPMVNDGVVRLRGLP 140
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 141 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMASQALLKHREEIGN 198
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 199 RYIEIFPS 206
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 18/210 (8%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++
Sbjct: 151 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMASQALLKHREEIGNRYIEIFPSRRNE 210
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRR-------AKRSEMDWALKRQ--- 131
+ G G + S+P I + A SE + L ++
Sbjct: 211 VRTHVGSHKGK--KIASSPTAKYITEPEMVFEEHEVNEDIRPMTAFESEKEIELPKEMSE 268
Query: 132 ---GAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAY 188
AV G+ + ++GLP++ +D+ F L+ P IT+ + +G+ TG A
Sbjct: 269 KIPEAVDFGTTSSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEAD 326
Query: 189 IQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+ F E+A A+L+ + + HR + L ++
Sbjct: 327 VHFDTHEDAVAAMLKDRSHVHHRYIELFLN 356
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 301 NFFAPLKPVRITMEYSSSGKATGEADVHFDTHEDAVAAMLKDRSHVHHRYIELFL 355
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 137 GSAVDQC-CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVD 193
G VD +R QGLP+ C EDV F I NGI + G+ G A I+
Sbjct: 25 GEEVDDVYLIRAQGLPWSCTVEDVLSFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMES 84
Query: 194 KENAEKALLRHKEKIGHRLVTL 215
+++ +KAL +H+ +G R V +
Sbjct: 85 EQDVQKALEKHRMYMGQRYVEV 106
>gi|440905001|gb|ELR55451.1| G-rich sequence factor 1, partial [Bos grunniens mutus]
Length = 362
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 64 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 115
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 116 -----------------------------------ALMKSLHVKSAPMVNDGVVRLRGLP 140
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 141 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMASQALLKHREEIGN 198
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 199 RYIEIFPS 206
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 18/210 (8%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++
Sbjct: 151 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMASQALLKHREEIGNRYIEIFPSRRNE 210
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRR-------AKRSEMDWALKRQ--- 131
+ G G + S+P I + A SE + L ++
Sbjct: 211 VRTHVGSHKGK--KIASSPTAKYITEPEMVFEEHEVNEDIRPMTAFESEKEIELPKEMSE 268
Query: 132 ---GAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAY 188
AV G+ + ++GLP++ +D+ F L+ P IT+ + +G+ TG A
Sbjct: 269 KIPEAVDFGTTSSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEAD 326
Query: 189 IQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+ F E+A A+L+ + + HR + L ++
Sbjct: 327 VHFDTHEDAVAAMLKDRSHVHHRYIELFLN 356
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 301 NFFAPLKPVRITMEYSSSGKATGEADVHFDTHEDAVAAMLKDRSHVHHRYIELFL 355
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 137 GSAVDQC-CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVD 193
G VD +R QGLP+ C EDV F I NGI + G+ G A I+
Sbjct: 25 GEEVDDVYLIRAQGLPWSCTVEDVLSFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMES 84
Query: 194 KENAEKALLRHKEKIGHRLVTL 215
+++ +KAL +H+ +G R V +
Sbjct: 85 EQDVQKALEKHRMYMGQRYVEV 106
>gi|26251966|gb|AAH40485.1| GRSF1 protein [Homo sapiens]
Length = 435
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 182 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 233
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 234 -----------------------------------ALMKSLQVKSSPVVNDGVVRLRGLP 258
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 259 YSCNEKDIVDFFAGLNIV--YITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 316
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 317 RYIEIFPS 324
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAE 198
D +R QGLP+ C EDV F I NGI + G+ G A I+ +++ +
Sbjct: 148 DVFLIRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQ 207
Query: 199 KALLRHKEKIGHRLVTL 215
KAL +H+ +G R V +
Sbjct: 208 KALEKHRMYMGQRYVEV 224
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
FF + V I + D GR +GEA V+F + A +AL +H+ +G+RYIE++
Sbjct: 269 FFAGLNIVYITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIF 322
>gi|355693777|gb|AER99447.1| G-rich RNA sequence binding factor 1 [Mustela putorius furo]
Length = 360
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 63 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 114
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V + V+ +RL+GLP
Sbjct: 115 -----------------------------------ALMKSLQVKASPVVNDGVVRLRGLP 139
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 140 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 197
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 198 RYIEIFPS 205
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 18/211 (8%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++
Sbjct: 150 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 209
Query: 82 SKEANGRGTGGFGGVKSTPYGVGI-----FCISQFLAKWMR--RAKRSEMDWALKRQ--- 131
+ G G + S+P I +++ +R A SE + L ++
Sbjct: 210 VRTHVGSHKGK--KMASSPTAKYITEPEMVFEEHEVSEDIRPMTAFESEKEIELPKEMSE 267
Query: 132 ---GAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAY 188
A G+A + ++GLP++ +D+ F L+ P IT+ + G+ TG A
Sbjct: 268 KLPEAADFGTASSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSNGKATGEAD 325
Query: 189 IQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+ F E+A A+L+ + + HR + L ++
Sbjct: 326 VHFDTHEDAVAAMLKDRSHVHHRYIELFLNS 356
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 300 NFFAPLKPVRITMEYSSNGKATGEADVHFDTHEDAVAAMLKDRSHVHHRYIELFL 354
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 137 GSAVDQC-CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVD 193
G VD +R QGLP+ C EDV F I NGI + G+ G A I+
Sbjct: 24 GEEVDDVYLIRAQGLPWSCTIEDVVNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMES 83
Query: 194 KENAEKALLRHKEKIGHRLVTL 215
+++ +KAL +H+ +G R V +
Sbjct: 84 EQDVQKALEKHRMYMGQRYVEV 105
>gi|118151012|ref|NP_001071439.1| G-rich sequence factor 1 [Bos taurus]
gi|117306552|gb|AAI26704.1| G-rich RNA sequence binding factor 1 [Bos taurus]
Length = 481
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 183 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 234
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 235 -----------------------------------ALMKSLHVKSAPMVNDGVVRLRGLP 259
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 260 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMASQALLKHREEIGN 317
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 318 RYIEIFPS 325
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 18/210 (8%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++
Sbjct: 270 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMASQALLKHREEIGNRYIEIFPSRRNE 329
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRR-------AKRSEMDWALKRQ--- 131
+ G G + S+P I + A SE + L ++
Sbjct: 330 VRTHVGSHKGK--KIASSPTAKYITEPEMVFEEHEVNEDIRPMTAFESEKEIELPKEMSE 387
Query: 132 ---GAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAY 188
AV G+ + ++GLP++ +D+ F L+ P IT+ + +G+ TG A
Sbjct: 388 KIPEAVDFGTTSSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEAD 445
Query: 189 IQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+ F E+A A+L+ + + HR + L ++
Sbjct: 446 VHFDTHEDAVAAMLKDRSHVHHRYIELFLN 475
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 420 NFFAPLKPVRITMEYSSSGKATGEADVHFDTHEDAVAAMLKDRSHVHHRYIELFL 474
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 137 GSAVDQC-CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVD 193
G VD +R QGLP+ C EDV F I NGI + G+ G A I+
Sbjct: 144 GEEVDDVYLIRAQGLPWSCTVEDVLSFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMES 203
Query: 194 KENAEKALLRHKEKIGHRLVTL 215
+++ +KAL +H+ +G R V +
Sbjct: 204 EQDVQKALEKHRMYMGQRYVEV 225
>gi|296486434|tpg|DAA28547.1| TPA: G-rich RNA sequence binding factor 1 [Bos taurus]
Length = 406
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 183 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 234
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 235 -----------------------------------ALMKSLHVKSAPMVNDGVVRLRGLP 259
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 260 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMASQALLKHREEIGN 317
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 318 RYIEIFPS 325
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 137 GSAVDQC-CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVD 193
G VD +R QGLP+ C EDV F I NGI + G+ G A I+
Sbjct: 144 GEEVDDVYLIRAQGLPWSCTVEDVLSFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMES 203
Query: 194 KENAEKALLRHKEKIGHRLVTL 215
+++ +KAL +H+ +G R V +
Sbjct: 204 EQDVQKALEKHRMYMGQRYVEV 225
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++
Sbjct: 270 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMASQALLKHREEIGNRYIEIF 323
>gi|311262314|ref|XP_003129120.1| PREDICTED: G-rich sequence factor 1-like [Sus scrofa]
Length = 479
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 181 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 232
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 233 -----------------------------------ALMKNLHVKSTPVVNDGVVRLRGLP 257
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 258 YSCNEKDIVDFFAGLHIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 315
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 316 RYIEIFPS 323
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 95/213 (44%), Gaps = 22/213 (10%)
Query: 22 QFFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++
Sbjct: 267 DFFAGLHIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIF----P 322
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRR---------AKRSEMDWALKRQ 131
S + G G K + +A A SE + L ++
Sbjct: 323 SRRNEVRTHVGSHKGKKMASSPTAKYITEPEMAFEENEVNEDVRPMTAFESEKEIELPKE 382
Query: 132 ------GAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTG 185
AV G+ + ++GLP++ +D+ F L+ P IT+ + +G+ TG
Sbjct: 383 MSEKLPEAVDFGTTSSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATG 440
Query: 186 VAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
A + F E+A A+L+ + + HR + L ++
Sbjct: 441 EADVHFETHEDAVAAMLKDRSHVHHRYIELFLN 473
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 137 GSAVDQC-CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVD 193
G VD +R QGLP+ C EDV F I NGI + G+ G A I+
Sbjct: 142 GEEVDDVYLIRAQGLPWSCTVEDVLSFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMES 201
Query: 194 KENAEKALLRHKEKIGHRLVTL 215
+++ +KAL +H+ +G R V +
Sbjct: 202 EQDVQKALEKHRMYMGQRYVEV 223
>gi|344244475|gb|EGW00579.1| G-rich sequence factor 1 [Cricetulus griseus]
Length = 621
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 228 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 279
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 280 -----------------------------------ALMKSLHVKSSPMVNDGVVRLRGLP 304
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 305 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 362
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 363 RYIEIFPS 370
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 40/219 (18%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++
Sbjct: 315 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIF-----P 369
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRR------------------AKRSE 123
S+ R G K +S AK++ A S+
Sbjct: 370 SRRNEVRTHVGSHKAKKM--------VSSPTAKYITEPEVVFEEHEVNEDIRPMTAFESD 421
Query: 124 MDWALKRQGAVLSGSAVDQCCM------RLQGLPYECKKEDVEKFLEGLEIVPNGITIPH 177
+ L ++ + VD M ++GLP++ +D+ F L+ P IT+ +
Sbjct: 422 KEIELPKEMSEKLPETVDFGSMPSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEY 479
Query: 178 DYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLV 216
+G+ TG A + F E+A A+L+ + + T++
Sbjct: 480 SSSGKATGEADVHFDTHEDAVAAMLKDRSHVRDNEKTIL 518
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 31/48 (64%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGD 69
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ D
Sbjct: 465 NFFAPLKPVRITMEYSSSGKATGEADVHFDTHEDAVAAMLKDRSHVRD 512
>gi|344284915|ref|XP_003414210.1| PREDICTED: G-rich sequence factor 1 [Loxodonta africana]
Length = 484
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 86/188 (45%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL +H+ MG RY+E+Y E N
Sbjct: 186 IHFLLNRDGKRRGDALIEMESQQDVQKALGKHRMYMGQRYVEVY--------EINNEDVD 237
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V + V+ +RL+GLP
Sbjct: 238 -----------------------------------ALMKSLQVKASPVVNDGVVRLRGLP 262
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 263 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 320
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 321 RYIEIFPS 328
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 97/210 (46%), Gaps = 18/210 (8%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++
Sbjct: 273 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 332
Query: 82 SKEANGRGTGGFGGVKSTPYGVGI---------FCISQFLAKWMRRAKRSEMD----WAL 128
+ G G + S+P I +++ + E++ +
Sbjct: 333 VRTHVGSHKGK--KMASSPTAKYITEPEMVFEEHEVNEDIPAMTTFESEKEIELPKEMSE 390
Query: 129 KRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAY 188
K AV G+ + ++GLP++ +D+ F L+ P IT+ + +G+ TG A
Sbjct: 391 KLPEAVDFGATPSVHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEAD 448
Query: 189 IQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+ F E+A A+L+ + + HR + L ++
Sbjct: 449 VHFSTHEDAVAAMLKDRSHVHHRYIELFLN 478
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 38/55 (69%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV FS+ +DA A+ + +S++ RYIEL++
Sbjct: 423 NFFAPLKPVRITMEYSSSGKATGEADVHFSTHEDAVAAMLKDRSHVHHRYIELFL 477
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 137 GSAVDQC-CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVD 193
G VD +R QGLP+ C EDV F I NGI + G+ G A I+
Sbjct: 147 GEEVDDVYLIRAQGLPWSCTVEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMES 206
Query: 194 KENAEKALLRHKEKIGHRLVTL 215
+++ +KAL +H+ +G R V +
Sbjct: 207 QQDVQKALGKHRMYMGQRYVEV 228
>gi|281427145|ref|NP_001094360.1| G-rich RNA sequence binding factor 1 [Rattus norvegicus]
Length = 479
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 86/188 (45%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 181 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 232
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V A+ +RL+GLP
Sbjct: 233 -----------------------------------ALMKSLQVKPTPALSDGVVRLRGLP 257
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 258 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 315
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 316 RYIEIFPS 323
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 18/210 (8%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++
Sbjct: 268 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 327
Query: 82 SKEANGRGTGGFGGVKSTPYGVGI----FCISQFLAKWMRR---AKRSEMDWALKRQGAV 134
+ G G + S+P I + R A SE + L ++ +
Sbjct: 328 VRTHVGSHKGK--KMVSSPTTKYITEPEVVFEEHEVNEDARPMTAFESEKEIELPKEMSD 385
Query: 135 LSGSAVDQCCM------RLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAY 188
AVD + ++GLP++ +D+ F L+ P IT+ + +G+ TG A
Sbjct: 386 KLAEAVDFGAVPSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEAD 443
Query: 189 IQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+ F E+A A+L+ + + HR + L ++
Sbjct: 444 VHFDTHEDAVAAMLKDRSHVQHRYIELFLN 473
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 418 NFFAPLKPVRITMEYSSSGKATGEADVHFDTHEDAVAAMLKDRSHVQHRYIELFL 472
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 137 GSAVDQC-CMRLQGLPYECKKEDVEKFLEGLEI--VPNGITIPHDYAGRCTGVAYIQFVD 193
G VD +R QGLP+ C EDV F I NGI + G+ G A I+
Sbjct: 142 GEEVDDVYLIRAQGLPWSCTVEDVLSFFSDCRIRNSENGIHFLLNRDGKRRGDALIEMES 201
Query: 194 KENAEKALLRHKEKIGHRLVTL 215
+++ +KAL +H+ +G R V +
Sbjct: 202 EQDVQKALEKHRMYMGQRYVEV 223
>gi|393908924|gb|EFO28044.2| heterogeneous nuclear ribonucleoprotein H [Loa loa]
Length = 370
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 90/191 (47%), Gaps = 40/191 (20%)
Query: 30 VNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEAN-GR 88
I L D GR+SGE V FSS +D AL + K +G RY+EL + SS E++
Sbjct: 34 TQIKLTKDRDGRASGEGYVVFSSREDYDFALTKDKKYIGKRYVEL---QQVSSMESDYDD 90
Query: 89 GTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQ 148
G +GG + P L G +RL
Sbjct: 91 GDRRYGGPVADP---------------------------------NLPGRET--SIVRLG 115
Query: 149 GLPYECKKEDVEKFLEGLEIVPNGITIPHD-YAGRCTGVAYIQFVDKENAEKALLRHKEK 207
GLPY C KE++ +F E LEI GI + +D Y+G+ G A++ F D+++A KAL ++KE
Sbjct: 116 GLPYGCTKEEIVRFFEPLEIADRGIVMTYDRYSGKPKGEAFVAFTDEDSASKALAKNKEY 175
Query: 208 IGHRLVTLVMS 218
I HR V + S
Sbjct: 176 IQHRYVDIYPS 186
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
M+ +GLP+ C ++D+ +F I + D GR +G Y+ F +E+ + AL +
Sbjct: 8 MKCRGLPWSCTEDDLREFFGEAARSITQIKLTKDRDGRASGEGYVVFSSREDYDFALTKD 67
Query: 205 KEKIGHRLVTL 215
K+ IG R V L
Sbjct: 68 KKYIGKRYVEL 78
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYA-GRCTGVAYIQFVDKENAEKA 200
+ C+R++GLPY + D+ F + L P I + ++Y R +G A ++F ++ + + A
Sbjct: 294 EYCIRMRGLPYRATERDIIDFFQPLR--PASIDVLYEYGTDRPSGEAIVEFRNRADFDAA 351
Query: 201 LLRHKEKIGHRLVTLV 216
+ R++ +G R V L+
Sbjct: 352 MQRNRNYMGSRYVELI 367
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 22 QFFKPIVPVNILLLTD-DAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF+P+ P +I +L + R SGEA VEF + D A+QR+++ MG RY+EL E
Sbjct: 313 DFFQPLRPASIDVLYEYGTDRPSGEAIVEFRNRADFDAAMQRNRNYMGSRYVELIPE 369
>gi|148596982|ref|NP_001091946.1| G-rich sequence factor 1 isoform 2 [Mus musculus]
Length = 362
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 85/188 (45%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 64 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 115
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V + +RL+GLP
Sbjct: 116 -----------------------------------ALMKSLQVKPSPVLSDGVVRLRGLP 140
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 141 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 198
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 199 RYIEIFPS 206
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 97/209 (46%), Gaps = 14/209 (6%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++
Sbjct: 151 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 210
Query: 82 SKEANGRGTGG-FGGVKSTPYGVG--IFCISQFLAKWMR--RAKRSEMDWALKRQGAVLS 136
+ G G T Y + + + +R A S+ + L ++ +
Sbjct: 211 VRTHVGSHKGKKMTSSPPTKYITEPEVVFEEHEVNEDIRPMTAFESDKEIELPKEMSEKL 270
Query: 137 GSAVDQCCM------RLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
AVD + ++GLP++ +D+ F L+ P IT+ + +G+ TG A +
Sbjct: 271 PEAVDFGTLPSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEADVH 328
Query: 191 FVDKENAEKALLRHKEKIGHRLVTLVMSG 219
F E+A A+L+ + + HR + L ++
Sbjct: 329 FDTHEDAVAAMLKDRSHVQHRYIELFLNS 357
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 301 NFFAPLKPVRITMEYSSSGKATGEADVHFDTHEDAVAAMLKDRSHVQHRYIELFL 355
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 137 GSAVDQC-CMRLQGLPYECKKEDVEKFLEGLEI--VPNGITIPHDYAGRCTGVAYIQFVD 193
G VD +R QGLP+ C EDV F I NGI + G+ G A I+
Sbjct: 25 GDEVDDVYLIRAQGLPWSCTVEDVLNFFSDCRIRNSENGIHFLLNRDGKRRGDALIEMES 84
Query: 194 KENAEKALLRHKEKIGHRLVTL 215
+++ +KAL +H+ +G R V +
Sbjct: 85 EQDVQKALEKHRMYMGQRYVEV 106
>gi|195395450|ref|XP_002056349.1| GJ10899 [Drosophila virilis]
gi|194143058|gb|EDW59461.1| GJ10899 [Drosophila virilis]
Length = 615
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 102/215 (47%), Gaps = 59/215 (27%)
Query: 7 VIDILIHITYCLLCSQFFKPIVPVNILLLTDDA-GRSSGEADVEFSSVDDAQRALQRHKS 65
++D L+++ L SQ I L+T G+++GEA VE +S DD + A + +K+
Sbjct: 77 ILDFLVNVE-VLNGSQ--------GIHLVTSRVDGKNTGEAYVEVASQDDVEEARKLNKA 127
Query: 66 NMGDRYIELYMEEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMD 125
+MG RYIE+++ +KEA R TGG G
Sbjct: 128 SMGHRYIEVFVATPKEAKEAM-RKTGGHGHA----------------------------- 157
Query: 126 WALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRC 183
++L+GLPY ++ +E+F GLEI + GI D GR
Sbjct: 158 -----------------FVVKLRGLPYAVTEQQIEEFFTGLEIKTDREGILFVMDRRGRA 200
Query: 184 TGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
TG A++QF +++ E+AL R++EKIGHR + + S
Sbjct: 201 TGEAFVQFESQDDTEQALGRNREKIGHRYIEIFRS 235
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
+FF PI P N+ + + G SG AD F + DD+Q A++RH+ MG RYIEL+ + T
Sbjct: 523 KFFDPIRPANVRINYNKKGLHSGTADAYFDTYDDSQLAMKRHREQMGSRYIELFYDGKT 581
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENA 197
+ V+ + ++GLPY + DV KF + I P + I ++ G +G A F +++
Sbjct: 500 NDVEYYTIHMRGLPYNSFENDVFKFFD--PIRPANVRINYNKKGLHSGTADAYFDTYDDS 557
Query: 198 EKALLRHKEKIGHRLVTLVMSG 219
+ A+ RH+E++G R + L G
Sbjct: 558 QLAMKRHREQMGSRYIELFYDG 579
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPH----DYAGRCTGVAYIQFVDKENAEKA 200
+RL+GLP+ +++ FL +E++ NG H G+ TG AY++ +++ E+A
Sbjct: 63 IRLRGLPWSATHKEILDFLVNVEVL-NGSQGIHLVTSRVDGKNTGEAYVEVASQDDVEEA 121
Query: 201 LLRHKEKIGHRLVTLVMS 218
+K +GHR + + ++
Sbjct: 122 RKLNKASMGHRYIEVFVA 139
>gi|312065923|ref|XP_003136024.1| heterogeneous nuclear ribonucleoprotein H [Loa loa]
Length = 383
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 93/190 (48%), Gaps = 40/190 (21%)
Query: 30 VNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEAN-GR 88
I L D GR+SGE V FSS +D AL + K +G RY+EL + SS E++
Sbjct: 34 TQIKLTKDRDGRASGEGYVVFSSREDYDFALTKDKKYIGKRYVEL---QQVSSMESDYDD 90
Query: 89 GTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQ 148
G +GG + P G R+ +++ RL
Sbjct: 91 GDRRYGGPVADPNLPG-------------------------RETSIV----------RLG 115
Query: 149 GLPYECKKEDVEKFLEGLEIVPNGITIPHD-YAGRCTGVAYIQFVDKENAEKALLRHKEK 207
GLPY C KE++ +F E LEI GI + +D Y+G+ G A++ F D+++A KAL ++KE
Sbjct: 116 GLPYGCTKEEIVRFFEPLEIADRGIVMTYDRYSGKPKGEAFVAFTDEDSASKALAKNKEY 175
Query: 208 IGHRLVTLVM 217
I HR +L +
Sbjct: 176 IQHRYCSLTV 185
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
M+ +GLP+ C ++D+ +F I + D GR +G Y+ F +E+ + AL +
Sbjct: 8 MKCRGLPWSCTEDDLREFFGEAARSITQIKLTKDRDGRASGEGYVVFSSREDYDFALTKD 67
Query: 205 KEKIGHRLVTL 215
K+ IG R V L
Sbjct: 68 KKYIGKRYVEL 78
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 22 QFFKPIVPVNILLLTD-DAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF+P+ P +I +L + R SGEA VEF + D A+QR+++ MG RY+EL E
Sbjct: 326 DFFQPLRPASIDVLYEYGTDRPSGEAIVEFRNRADFDAAMQRNRNYMGSRYVELIPE 382
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYA-GRCTGVAYIQFVDKENAEKA 200
+ C+R++GLPY + D+ F + L P I + ++Y R +G A ++F ++ + + A
Sbjct: 307 EYCIRMRGLPYRATERDIIDFFQPLR--PASIDVLYEYGTDRPSGEAIVEFRNRADFDAA 364
Query: 201 LLRHKEKIGHRLVTLV 216
+ R++ +G R V L+
Sbjct: 365 MQRNRNYMGSRYVELI 380
>gi|148673403|gb|EDL05350.1| G-rich RNA sequence binding factor 1, isoform CRA_b [Mus musculus]
Length = 403
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 85/188 (45%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 105 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 156
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V + +RL+GLP
Sbjct: 157 -----------------------------------ALMKSLQVKPSPVLSDGVVRLRGLP 181
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 182 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 239
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 240 RYIEIFPS 247
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 18/211 (8%)
Query: 22 QFFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++
Sbjct: 191 DFFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRN 250
Query: 81 SSKEANGRGTGGFGGVKSTP-----YGVGIFCISQFLAKWMR--RAKRSEMDWALKRQGA 133
+ G G + S+P + + + +R A S+ + L ++ +
Sbjct: 251 EVRTHVGSHKGK--KMTSSPPTKYITEPEVVFEEHEVNEDIRPMTAFESDKEIELPKEMS 308
Query: 134 VLSGSAVDQCCM------RLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVA 187
AVD + ++GLP++ +D+ F L+ P IT+ + +G+ TG A
Sbjct: 309 EKLPEAVDFGTLPSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEA 366
Query: 188 YIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+ F E+A A+L+ + + HR + L ++
Sbjct: 367 DVHFDTHEDAVAAMLKDRSHVQHRYIELFLN 397
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 137 GSAVDQC-CMRLQGLPYECKKEDVEKFLEGLEI--VPNGITIPHDYAGRCTGVAYIQFVD 193
G VD +R QGLP+ C EDV F I NGI + G+ G A I+
Sbjct: 66 GDEVDDVYLIRAQGLPWSCTVEDVLNFFSDCRIRNSENGIHFLLNRDGKRRGDALIEMES 125
Query: 194 KENAEKALLRHKEKIGHRLVTL 215
+++ +KAL +H+ +G R V +
Sbjct: 126 EQDVQKALEKHRMYMGQRYVEV 147
>gi|26354144|dbj|BAC40702.1| unnamed protein product [Mus musculus]
Length = 344
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 85/188 (45%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 46 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 97
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V + +RL+GLP
Sbjct: 98 -----------------------------------ALMKSLQVKPSPVLSDGVVRLRGLP 122
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 123 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 180
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 181 RYIEIFPS 188
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 18/211 (8%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++
Sbjct: 133 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 192
Query: 82 SKEANGRGTGGFGGVKSTP-----YGVGIFCISQFLAKWMR--RAKRSEMDWALKRQGAV 134
+ G G + S+P + + + +R A S+ + L ++ +
Sbjct: 193 VRTHVGSHKGK--KMTSSPPTKYITEPEVVFEEHEVNEDIRPMTAFESDKEIELPKEMSE 250
Query: 135 LSGSAVDQCCM------RLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAY 188
AVD + ++GLP++ +D+ F L+ P IT+ + +G+ TG A
Sbjct: 251 KLPEAVDFGTLPSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEAD 308
Query: 189 IQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+ F E+A A+L+ + + HR + L ++
Sbjct: 309 VHFDTHEDAVAAMLKDRSHVQHRYIELFLNS 339
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 283 NFFAPLKPVRITMEYSSSGKATGEADVHFDTHEDAVAAMLKDRSHVQHRYIELFL 337
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 137 GSAVDQC-CMRLQGLPYECKKEDVEKFLEGLEI--VPNGITIPHDYAGRCTGVAYIQFVD 193
G VD +R QGLP+ C EDV F I NGI + G+ G A I+
Sbjct: 7 GDEVDDVYLIRAQGLPWSCTVEDVLNFFSDCRIRNSENGIHFLLNRDGKRRGDALIEMES 66
Query: 194 KENAEKALLRHKEKIGHRLVTL 215
+++ +KAL +H+ +G R V +
Sbjct: 67 EQDVQKALEKHRMYMGQRYVEV 88
>gi|324504848|gb|ADY42090.1| Heterogeneous nuclear ribonucleoprotein H2 [Ascaris suum]
Length = 282
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 93/199 (46%), Gaps = 41/199 (20%)
Query: 23 FFKPI--VPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FF+P V I L + R SGEA V F++ +D + AL R K +MG RYIE++
Sbjct: 74 FFQPADRSIVKITLTKNRDARPSGEAFVAFNNNEDYEYALTRDKQHMGKRYIEVF-PASA 132
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
S E N G RR R G L G
Sbjct: 133 SDVEYNITGP-------------------------ERRL----------RMGISLPGR-- 155
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDY-AGRCTGVAYIQFVDKENAEK 199
D +RL+GLPY C +++ +F + I NGI +P+D+ +G+ TG A++ F + ++A +
Sbjct: 156 DTSIVRLRGLPYGCTNDEITRFFHPIPIAANGIVLPYDHRSGKATGDAFVAFYEPDSAAR 215
Query: 200 ALLRHKEKIGHRLVTLVMS 218
AL R++ I HR + + S
Sbjct: 216 ALERNRNNIQHRYIEVFPS 234
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 15/77 (19%)
Query: 21 SQFFKPI-VPVNILLLTDD--AGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY-- 75
++FF PI + N ++L D +G+++G+A V F D A RAL+R+++N+ RYIE++
Sbjct: 175 TRFFHPIPIAANGIVLPYDHRSGKATGDAFVAFYEPDSAARALERNRNNIQHRYIEVFPS 234
Query: 76 ----------MEEGTSS 82
+EEG SS
Sbjct: 235 SYGEMLRALELEEGRSS 251
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 42/76 (55%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
++ +GLP+ C +E++ F + + IT+ + R +G A++ F + E+ E AL R
Sbjct: 57 VKCRGLPWSCTEEEIRIFFQPADRSIVKITLTKNRDARPSGEAFVAFNNNEDYEYALTRD 116
Query: 205 KEKIGHRLVTLVMSGA 220
K+ +G R + + + A
Sbjct: 117 KQHMGKRYIEVFPASA 132
>gi|26337751|dbj|BAC32561.1| unnamed protein product [Mus musculus]
Length = 479
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 85/188 (45%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 181 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 232
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V + +RL+GLP
Sbjct: 233 -----------------------------------ALMKSLQVKPSPVLSDGVVRLRGLP 257
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 258 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 315
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 316 RYIEIFPS 323
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 18/210 (8%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++
Sbjct: 268 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 327
Query: 82 SKEANGRGTGGFGGVKSTP-----YGVGIFCISQFLAKWMRRAKRSEMDWAL-------- 128
+ G G + S+P + + + +R E D +
Sbjct: 328 VRTHVGSHKGK--KMTSSPPTKYITEPEVVFEEHEVNEDIRPMTAFESDKEIELPKEMSE 385
Query: 129 KRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAY 188
K AV G+ + ++GLP++ +D+ F L+ P IT+ + +G+ TG A
Sbjct: 386 KLPEAVDFGTLPSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEAD 443
Query: 189 IQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+ F E+A A+L+ + + HR + L ++
Sbjct: 444 VHFDTHEDAVAAMLKDRSHVQHRYIELFLN 473
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 418 NFFAPLKPVRITMEYSSSGKATGEADVHFDTHEDAVAAMLKDRSHVQHRYIELFL 472
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 137 GSAVDQC-CMRLQGLPYECKKEDVEKFLEGLEI--VPNGITIPHDYAGRCTGVAYIQFVD 193
G VD +R QGLP+ C EDV F I NGI + G+ G A I+
Sbjct: 142 GDEVDDVYLIRAQGLPWSCTVEDVLNFFSDCRIRNSENGIHFLLNRDGKRRGDALIEMES 201
Query: 194 KENAEKALLRHKEKIGHRLVTL 215
+++ +KAL +H+ +G R V +
Sbjct: 202 EQDVQKALEKHRMYMGQRYVEV 223
>gi|148673402|gb|EDL05349.1| G-rich RNA sequence binding factor 1, isoform CRA_a [Mus musculus]
Length = 429
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 85/188 (45%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 131 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 182
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V + +RL+GLP
Sbjct: 183 -----------------------------------ALMKSLQVKPSPVLSDGVVRLRGLP 207
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 208 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 265
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 266 RYIEIFPS 273
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 18/210 (8%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++
Sbjct: 218 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 277
Query: 82 SKEANGRGTGGFGGVKSTP-----YGVGIFCISQFLAKWMRRAKRSEMDWAL-------- 128
+ G G + S+P + + + +R E D +
Sbjct: 278 VRTHVGSHKGK--KMTSSPPTKYITEPEVVFEEHEVNEDIRPMTAFESDKEIELPKEMSE 335
Query: 129 KRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAY 188
K AV G+ + ++GLP++ +D+ F L+ P IT+ + +G+ TG A
Sbjct: 336 KLPEAVDFGTLPSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEAD 393
Query: 189 IQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+ F E+A A+L+ + + HR + L ++
Sbjct: 394 VHFDTHEDAVAAMLKDRSHVQHRYIELFLN 423
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 368 NFFAPLKPVRITMEYSSSGKATGEADVHFDTHEDAVAAMLKDRSHVQHRYIELFL 422
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 137 GSAVDQC-CMRLQGLPYECKKEDVEKFLEGLEI--VPNGITIPHDYAGRCTGVAYIQFVD 193
G VD +R QGLP+ C EDV F I NGI + G+ G A I+
Sbjct: 92 GDEVDDVYLIRAQGLPWSCTVEDVLNFFSDCRIRNSENGIHFLLNRDGKRRGDALIEMES 151
Query: 194 KENAEKALLRHKEKIGHRLVTL 215
+++ +KAL +H+ +G R V +
Sbjct: 152 EQDVQKALEKHRMYMGQRYVEV 173
>gi|148596934|ref|NP_848815.2| G-rich sequence factor 1 isoform 1 [Mus musculus]
gi|55976518|sp|Q8C5Q4.2|GRSF1_MOUSE RecName: Full=G-rich sequence factor 1; Short=GRSF-1
gi|26336891|dbj|BAC32129.1| unnamed protein product [Mus musculus]
gi|182888413|gb|AAI60216.1| G-rich RNA sequence binding factor 1 [synthetic construct]
Length = 479
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 85/188 (45%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 181 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 232
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V + +RL+GLP
Sbjct: 233 -----------------------------------ALMKSLQVKPSPVLSDGVVRLRGLP 257
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 258 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 315
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 316 RYIEIFPS 323
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 18/210 (8%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++
Sbjct: 268 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 327
Query: 82 SKEANGRGTGGFGGVKSTP-----YGVGIFCISQFLAKWMRRAKRSEMDWAL-------- 128
+ G G + S+P + + + +R E D +
Sbjct: 328 VRTHVGSHKGK--KMTSSPPTKYITEPEVVFEEHEVNEDIRPMTAFESDKEIELPKEMSE 385
Query: 129 KRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAY 188
K AV G+ + ++GLP++ +D+ F L+ P IT+ + +G+ TG A
Sbjct: 386 KLPEAVDFGTLPSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEAD 443
Query: 189 IQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+ F E+A A+L+ + + HR + L ++
Sbjct: 444 VHFDTHEDAVAAMLKDRSHVQHRYIELFLN 473
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 418 NFFAPLKPVRITMEYSSSGKATGEADVHFDTHEDAVAAMLKDRSHVQHRYIELFL 472
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 137 GSAVDQC-CMRLQGLPYECKKEDVEKFLEGLEI--VPNGITIPHDYAGRCTGVAYIQFVD 193
G VD +R QGLP+ C EDV F I NGI + G+ G A I+
Sbjct: 142 GDEVDDVYLIRAQGLPWSCTVEDVLNFFSDCRIRNSENGIHFLLNRDGKRRGDALIEMES 201
Query: 194 KENAEKALLRHKEKIGHRLVTL 215
+++ +KAL +H+ +G R V +
Sbjct: 202 EQDVQKALEKHRMYMGQRYVEV 223
>gi|148667169|gb|EDK99585.1| mCG133010, isoform CRA_b [Mus musculus]
Length = 149
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 70/142 (49%), Gaps = 43/142 (30%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S DD + AL++ + +MG RYIE++
Sbjct: 51 GRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVF------------------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ R+EMDW LK G + SA D +RL+GLP+ C KE++
Sbjct: 87 ------------------KSHRTEMDWVLKHSGPNSADSANDGF-VRLRGLPFGCTKEEI 127
Query: 160 EKFLEGLEIVPNGITIPHDYAG 181
+F GLEIVPNGIT+P D G
Sbjct: 128 VQFFSGLEIVPNGITLPVDPEG 149
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
++L+GLP+ C EDV+ FL I G+ + GR +G A+++ +++ + AL
Sbjct: 13 VKLRGLPWSCSIEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLALK 72
Query: 203 RHKEKIGHRLVTLVMS 218
+ +E +GHR + + S
Sbjct: 73 KDRESMGHRYIEVFKS 88
>gi|26346715|dbj|BAC37006.1| unnamed protein product [Mus musculus]
Length = 479
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 84/188 (44%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 181 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 232
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V + +RL GLP
Sbjct: 233 -----------------------------------ALMKSLQVKPSPVLSDGVVRLTGLP 257
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 258 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 315
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 316 RYIEIFPS 323
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 18/210 (8%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++
Sbjct: 268 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 327
Query: 82 SKEANGRGTGGFGGVKSTP-----YGVGIFCISQFLAKWMRRAKRSEMDWAL-------- 128
+ G G + S+P + + + +R E D +
Sbjct: 328 VRTHVGSHKGK--KMTSSPPTKYITEPEVVFEEHEVNEDIRPMTAFESDKEIELPKEMSE 385
Query: 129 KRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAY 188
K AV G+ + ++GLP++ +D+ F L+ P IT+ + +G+ TG A
Sbjct: 386 KLPEAVDFGTLPSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEAD 443
Query: 189 IQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+ F E+A A+L+ + + HR + L ++
Sbjct: 444 VHFDTHEDAVAAMLKDRSHVQHRYIELFLN 473
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 418 NFFAPLKPVRITMEYSSSGKATGEADVHFDTHEDAVAAMLKDRSHVQHRYIELFL 472
Score = 43.9 bits (102), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 137 GSAVDQC-CMRLQGLPYECKKEDVEKFLEGLEI--VPNGITIPHDYAGRCTGVAYIQFVD 193
G VD +R QGLP+ C EDV F I NGI + G+ G A I+
Sbjct: 142 GDEVDDVYLIRAQGLPWSCTVEDVLNFFSDCRIRNSENGIHFLLNRDGKRRGDALIEMES 201
Query: 194 KENAEKALLRHKEKIGHRLVTL 215
+++ +KAL +H+ +G R V +
Sbjct: 202 EQDVQKALEKHRMYMGQRYVEV 223
>gi|126330654|ref|XP_001364439.1| PREDICTED: g-rich sequence factor 1 isoform 1 [Monodelphis
domestica]
Length = 478
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 86/188 (45%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A VE S D ++AL++H MG RY+E+Y E N
Sbjct: 181 IHFLLNRDGKRRGDALVEMESEQDVKKALEKHHLYMGQRYVEVY--------EINNEDVD 232
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + S AV+ +RL+GLP
Sbjct: 233 -----------------------------------ALMKSLQAKSNPAVNDGVVRLRGLP 257
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRC-TGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL I+ IT D+ GR TG AY+QF + E A +ALL+HKE+IG+
Sbjct: 258 YSCNEKDIVDFFAGLNII--DITFVMDHRGRKKTGEAYVQFEEPEMANQALLKHKEEIGN 315
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 316 RYIEIFPS 323
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 23 FFKPIVPVNILLLTDDAGRS-SGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + ++I + D GR +GEA V+F + A +AL +HK +G+RYIE++
Sbjct: 268 FFAGLNIIDITFVMDHRGRKKTGEAYVQFEEPEMANQALLKHKEEIGNRYIEIFPSRRNE 327
Query: 82 SKEANGRGTGGF-------GGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAV 134
+ G G GG + P + S+ L M SE + L ++
Sbjct: 328 VRTHVGSHKGKKVAPSLLKGGPEPGP-SLDEHDRSEELRAMM--TFESEKEGELHKEAPE 384
Query: 135 LSGSAVDQCCM------RLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAY 188
S A D M ++GLP++ +D+ F L+ P IT+ + +G+ TG A
Sbjct: 385 KSAEAADFGTMPSLHFVHMRGLPFQANAQDIVNFFAPLK--PVRITMEYSSSGKATGEAD 442
Query: 189 IQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+ F E+A A+ + + + HR + L ++
Sbjct: 443 VHFETHEDAVAAMGKDRSHVQHRYIELFLN 472
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 417 NFFAPLKPVRITMEYSSSGKATGEADVHFETHEDAVAAMGKDRSHVQHRYIELFL 471
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAE 198
D +R QGLP+ C EDV KF I NGI + G+ G A ++ +++ +
Sbjct: 147 DVYLIRAQGLPWSCTVEDVLKFFFDCRIRNGENGIHFLLNRDGKRRGDALVEMESEQDVK 206
Query: 199 KALLRHKEKIGHRLVTL 215
KAL +H +G R V +
Sbjct: 207 KALEKHHLYMGQRYVEV 223
>gi|45709575|gb|AAH67720.1| Zgc:85960 protein [Danio rerio]
Length = 302
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 101/217 (46%), Gaps = 11/217 (5%)
Query: 10 ILIHITYCLLCSQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNM 67
L+ + LCS FF IVP I L D GRS+GEA V+F+S D A++AL++HK +
Sbjct: 9 FLLDVARKRLCS-FFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQDIAEKALKKHKERI 67
Query: 68 GDRYIELYMEEGTSSKEANGRGTGGFGGVKSTPY------GVGIFCISQFLAKWMRRAKR 121
G RYIE++ + G G + PY G G +S+ + R
Sbjct: 68 GHRYIEIFKSSRAEVRTHYEPPRKGMGMQRPGPYDRPSGGGRGYNGMSRGGSFDRMRRGG 127
Query: 122 SEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAG 181
+ R G + + C+ ++GLPY + D+ F L V I I D G
Sbjct: 128 YGGGVSDGRYGDGGNFQSTTGHCVHMRGLPYRATEPDIYNFFSPLNPVRVHIEIGPD--G 185
Query: 182 RCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
R TG A ++F E+A A+ + K + HR V L ++
Sbjct: 186 RVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLN 222
>gi|195108109|ref|XP_001998635.1| GI24079 [Drosophila mojavensis]
gi|193915229|gb|EDW14096.1| GI24079 [Drosophila mojavensis]
Length = 605
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 88/181 (48%), Gaps = 49/181 (27%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
G+++GEA VE +S +D + A + +K++MG RYIE+++ +KEA R TGG G
Sbjct: 100 GKNTGEAYVEVASQEDVEEARKLNKASMGHRYIEVFVATPKEAKEAM-RKTGGHGHA--- 155
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++L+GLPY ++ +
Sbjct: 156 -------------------------------------------FVVKLRGLPYAVTEQQI 172
Query: 160 EKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVM 217
E+F GLEI + GI D GR TG A++QF +++ E+AL R++EKIGHR + +
Sbjct: 173 EEFFTGLEIKTDREGILFVMDRRGRATGEAFVQFESQDDTEQALGRNREKIGHRYIEIFR 232
Query: 218 S 218
S
Sbjct: 233 S 233
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
+FF PI P N+ + + G SG AD F + DD+Q A++RH+ MG RYIEL+ + T
Sbjct: 503 KFFDPIRPANVRINYNKKGLHSGTADAYFDTYDDSQLAMKRHREQMGSRYIELFYDGKT 561
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
IL + D GR++GEA V+F S DD ++AL R++ +G RYIE++
Sbjct: 188 ILFVMDRRGRATGEAFVQFESQDDTEQALGRNREKIGHRYIEIF 231
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENA 197
+ V+ + ++GLPY + DV KF + I P + I ++ G +G A F +++
Sbjct: 480 NDVEYYTIHMRGLPYNSFENDVFKFFD--PIRPANVRINYNKKGLHSGTADAYFDTYDDS 537
Query: 198 EKALLRHKEKIGHRLVTLVMSG 219
+ A+ RH+E++G R + L G
Sbjct: 538 QLAMKRHREQMGSRYIELFYDG 559
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIV--PNGI-TIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+RL+GLP+ +++ FL +E++ GI + G+ TG AY++ +E+ E+A
Sbjct: 61 IRLRGLPWSATHKEILDFLVNVEVLNGSQGIHLVTSRLDGKNTGEAYVEVASQEDVEEAR 120
Query: 202 LRHKEKIGHRLVTLVMS 218
+K +GHR + + ++
Sbjct: 121 KLNKASMGHRYIEVFVA 137
>gi|213513203|ref|NP_001135339.1| G-rich sequence factor 1 [Salmo salar]
gi|209734348|gb|ACI68043.1| G-rich sequence factor 1 [Salmo salar]
Length = 400
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 46/187 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ +G+A +E DD +AL++H+ +G RYIE++
Sbjct: 133 IHLTVNRDGKPNGQAFIELEHEDDVGKALEKHRQYLGPRYIEVF---------------- 176
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
S+ + LK+ + + V +R++GLP
Sbjct: 177 --------------------------EVTNSDAETILKKSVQLPARDGV----VRIRGLP 206
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
Y C + DV F GL++ +G+T+ DY GR +G AY+QF+ +E A++AL R ++ IG+R
Sbjct: 207 YSCTETDVMLFFSGLDVAEDGVTLVTDYRGRNSGEAYVQFLTQEQADEALTRDRQVIGNR 266
Query: 212 LVTLVMS 218
+ + S
Sbjct: 267 YIEVFPS 273
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
QFF P+ IL+ GR+SGEADV F+S DA A+ R K++M +RYIEL++ +S
Sbjct: 337 QFFSPLALSRILVEFGPDGRASGEADVYFTSHQDAVSAMTRDKAHMQERYIELFLNSTSS 396
Query: 82 SK 83
K
Sbjct: 397 DK 398
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVP--NGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+R +GLP+ C ED+ +F + GI + + G+ G A+I+ +++ KAL
Sbjct: 103 IRAKGLPWSCTTEDLLQFFSECRVRDGVKGIHLTVNRDGKPNGQAFIELEHEDDVGKALE 162
Query: 203 RHKEKIGHRLVTL 215
+H++ +G R + +
Sbjct: 163 KHRQYLGPRYIEV 175
>gi|395541913|ref|XP_003772881.1| PREDICTED: G-rich sequence factor 1 [Sarcophilus harrisii]
Length = 441
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 85/188 (45%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A VE S D ++AL++H MG RY+E+Y E N
Sbjct: 144 IHFLLNRDGKRRGDALVELESEQDVKKALEKHHLYMGQRYVEVY--------EINNEDVD 195
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + S V+ +RL+GLP
Sbjct: 196 -----------------------------------ALMKSLQAKSNPVVNDGVVRLRGLP 220
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT D+ GR TG AY+QF + E A +ALL+HKE+IG+
Sbjct: 221 YSCNEKDIVDFFAGLNIV--DITFVMDHRGRRKTGEAYVQFEEPEMANQALLKHKEEIGN 278
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 279 RYIEIFPS 286
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + V+I + D GR +GEA V+F + A +AL +HK +G+RYIE++ S
Sbjct: 231 FFAGLNIVDITFVMDHRGRRKTGEAYVQFEEPEMANQALLKHKEEIGNRYIEIF----PS 286
Query: 82 SKEANGRGTGGFGGVKSTP----YGV--GIFCISQFLAKWMR--RAKRSEMDWALKRQGA 133
+ G G K+ P YG + ++ +R SE + L ++
Sbjct: 287 RRNEVRTHVGSHKGKKAVPSMAKYGTEPELNFEEHDGSEELRPITTFESEKEMELPKEAP 346
Query: 134 VLSGSAVDQCCM------RLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVA 187
+ A D + ++GLP++ +D+ F L+ P IT+ + +G+ TG A
Sbjct: 347 EKTPEAADFGTLPSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEA 404
Query: 188 YIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+ F E+A A+ + + + HR + L ++
Sbjct: 405 DVHFETHEDAIAAMSKDRSHVQHRYIELFLN 435
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 380 NFFAPLKPVRITMEYSSSGKATGEADVHFETHEDAIAAMSKDRSHVQHRYIELFL 434
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Query: 122 SEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDY 179
SE D A + G D +R QGLP+ C EDV KF I +GI +
Sbjct: 95 SEYDLATSKLGE----EEDDIYLIRAQGLPWSCTVEDVLKFFSDCRIRNGEHGIHFLLNR 150
Query: 180 AGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTL 215
G+ G A ++ +++ +KAL +H +G R V +
Sbjct: 151 DGKRRGDALVELESEQDVKKALEKHHLYMGQRYVEV 186
>gi|452823782|gb|EME30790.1| RNA-binding protein [Galdieria sulphuraria]
Length = 739
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 107/242 (44%), Gaps = 43/242 (17%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEAN 86
++P + + + G+ GEA V+ SVDD RAL+ H+ +G RYIE++
Sbjct: 280 VIPCAVHFVLNQQGKPRGEAFVQLLSVDDVNRALELHRQVLGHRYIEVF----------- 328
Query: 87 GRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQC--- 143
KSTP Q ++ + R A + + S++D
Sbjct: 329 ----------KSTP---------QEMSTVLSRQNGRSTSLAPFSRTTYSNVSSIDDSKPF 369
Query: 144 -CMRLQGLPYECKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFVDKENAE 198
+R++GLP+ + V +F +G+EI GI I + G G A+++F ++
Sbjct: 370 FIIRMRGLPFSASADQVARFFDGIEIAGCRSNGGIHIVQNQDGHPIGEAFVEFASEDALN 429
Query: 199 KALLRHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVRSTICVLCHPLTPR 258
KAL RHK+ +G R + L S L+ + P++R + + +T+C + R
Sbjct: 430 KALQRHKQMMGKRYIELFRSSLMEMLNTIERHGGPVAR-----AAIEATVCENSVGTSSR 484
Query: 259 SV 260
SV
Sbjct: 485 SV 486
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 89/191 (46%), Gaps = 33/191 (17%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY---MEEGTSSKEANGR 88
I ++ + G GEA VEF+S D +ALQRHK MG RYIEL+ + E ++ E +G
Sbjct: 404 IHIVQNQDGHPIGEAFVEFASEDALNKALQRHKQMMGKRYIELFRSSLMEMLNTIERHG- 462
Query: 89 GTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQ 148
G +++T + S+ +VL+ A +R++
Sbjct: 463 GPVARAAIEATVCENSVGTSSR----------------------SVLNSDASTCSFLRIR 500
Query: 149 GLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQF--VDKENAEKALLRHKE 206
GLP++ D+ F IVP GI ++ R G A++QF VD+ N L+ K+
Sbjct: 501 GLPFDTTVSDITTFFAEYRIVPGGIYFVNNGLDRPKGEAFVQFSSVDERNDA---LKKKD 557
Query: 207 KI--GHRLVTL 215
K+ G R V L
Sbjct: 558 KLYMGSRYVEL 568
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 10/101 (9%)
Query: 131 QGAVLSGSAVDQC----------CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYA 180
Q + L GSA++ +RL+GLP+ KEDV FLEG +++P + +
Sbjct: 233 QSSSLLGSAIEASPVAAGVPTGSIIRLRGLPWSATKEDVLNFLEGAQVIPCAVHFVLNQQ 292
Query: 181 GRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGAQ 221
G+ G A++Q + ++ +AL H++ +GHR + + S Q
Sbjct: 293 GKPRGEAFVQLLSVDDVNRALELHRQVLGHRYIEVFKSTPQ 333
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 14/202 (6%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRH-KSNMGDRYIELYMEEGTSSKEA 85
IVP I + + R GEA V+FSSVD+ AL++ K MG RY+EL+ E + ++ +
Sbjct: 520 IVPGGIYFVNNGLDRPKGEAFVQFSSVDERNDALKKKDKLYMGSRYVELF--EASEAEVS 577
Query: 86 NGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDW--------ALKRQGAVLSG 137
G+ + S + ++ + W A + +
Sbjct: 578 ALLGSNLCSTITSAASSIANSSSAKSTFSNPNTKSNELLTWESVGRGWDASSWKSNIPKS 637
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENA 197
+ +R++GLP+ D++ F I + + + D GR +G A++ F +E A
Sbjct: 638 HIIPNRTVRMRGLPFRATISDIQFFFSDFHITESDVVLGFDKMGRPSGEAWVTFGTEEEA 697
Query: 198 EKAL--LRHKEKIGHRLVTLVM 217
A+ L+H IG R + L +
Sbjct: 698 RNAVSQLQHAH-IGKRYIELFL 718
>gi|432960846|ref|XP_004086494.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like [Oryzias
latipes]
Length = 370
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 93/213 (43%), Gaps = 54/213 (25%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ L D GR SG A +E +D +AL++H+ +G RY+E+ E T+S
Sbjct: 104 VHLTLDRLGRPSGRAFIEMEHEEDVSKALEKHRQYLGPRYVEV--SEVTNSDAET----- 156
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
I Q +A A + + L+GLP
Sbjct: 157 ----------------ILQHVAP-----------------------PAAEDGVVMLRGLP 177
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C ++D+ F GL++V NGIT+ D GR +G A++QF +E A KAL +H+E +GHR
Sbjct: 178 FSCTQDDILLFFSGLDVVENGITMVTDGRGRNSGEAFVQFTSQEVAGKALQKHRELMGHR 237
Query: 212 LVTLVMSGAQWFLS--------PPLTNETPISR 236
V + S + S PP + P R
Sbjct: 238 YVEVFPSRSSEIRSTWKRRSSLPPQSASPPAGR 270
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 23/194 (11%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEAN 86
+V I ++TD GR+SGEA V+F+S + A +ALQ+H+ MG RY+E++ + +
Sbjct: 194 VVENGITMVTDGRGRNSGEAFVQFTSQEVAGKALQKHRELMGHRYVEVFPSRSSEIRSTW 253
Query: 87 GRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMR 146
R + S P G R A + + S + +
Sbjct: 254 KRRSSLPPQSASPPAG--------------RPA-------SAPHRAVSPQSSEANSHFIH 292
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKE 206
++GLP++ ED+ KF V + I I GR +G A + F +A A+ R +
Sbjct: 293 MRGLPFQASGEDIVKFFS--PYVVSKIMIECRPDGRTSGEADVYFSCHRDAVAAMSRDRT 350
Query: 207 KIGHRLVTLVMSGA 220
+GHR + L ++ A
Sbjct: 351 NMGHRYIELFLNSA 364
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF P V I++ GR+SGEADV FS DA A+ R ++NMG RYIEL++
Sbjct: 307 KFFSPYVVSKIMIECRPDGRTSGEADVYFSCHRDAVAAMSRDRTNMGHRYIELFLNSAPD 366
Query: 82 SKE 84
S +
Sbjct: 367 SDQ 369
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
++++GLP+ C ++ F I G+ + D GR +G A+I+ +E+ KAL
Sbjct: 74 VQVRGLPWSCTVHELLHFFSDCRIRDGERGVHLTLDRLGRPSGRAFIEMEHEEDVSKALE 133
Query: 203 RHKEKIGHRLVTL 215
+H++ +G R V +
Sbjct: 134 KHRQYLGPRYVEV 146
>gi|195445396|ref|XP_002070305.1| GK11105 [Drosophila willistoni]
gi|194166390|gb|EDW81291.1| GK11105 [Drosophila willistoni]
Length = 642
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 87/181 (48%), Gaps = 49/181 (27%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
G+++GEA VE +S +D + A + +K++MG RYIE++ +KEA
Sbjct: 95 GKNTGEAYVEVASQEDVEEARKLNKASMGHRYIEVFTATPKEAKEA-------------- 140
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
MR+ G + ++L+GLPY ++ +
Sbjct: 141 ----------------MRKI-----------------GGHANAFVVKLRGLPYAVTEQQI 167
Query: 160 EKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVM 217
E+F GLEI + GI D GR TG A++QF +++ E+AL R++EKIGHR + +
Sbjct: 168 EEFFTGLEIKTDREGILFVTDRRGRATGEAFVQFESQDDTEQALGRNREKIGHRYIEIFR 227
Query: 218 S 218
S
Sbjct: 228 S 228
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 5 FYVIDI--LIHITYCLLCSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQR 62
+Y I + L + ++ +FF+PI P N+ + + G SG AD F + +D+Q A++R
Sbjct: 521 YYTIHMRGLPYTSFENDVFKFFEPIRPANVRINYNKKGLHSGTADAYFDTYEDSQLAMKR 580
Query: 63 HKSNMGDRYIELYME 77
H+ MG RYIEL+ +
Sbjct: 581 HREQMGSRYIELFYD 595
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 33/44 (75%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
IL +TD GR++GEA V+F S DD ++AL R++ +G RYIE++
Sbjct: 183 ILFVTDRRGRATGEAFVQFESQDDTEQALGRNREKIGHRYIEIF 226
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
G+ ++ + ++GLPY + DV KF E I P + I ++ G +G A F E+
Sbjct: 516 GNDIEYYTIHMRGLPYTSFENDVFKFFE--PIRPANVRINYNKKGLHSGTADAYFDTYED 573
Query: 197 AEKALLRHKEKIGHRLVTLVMSG 219
++ A+ RH+E++G R + L G
Sbjct: 574 SQLAMKRHREQMGSRYIELFYDG 596
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPH----DYAGRCTGVAYIQFVDKENAEKA 200
+RL+GLP+ +++ FLE + V NG H G+ TG AY++ +E+ E+A
Sbjct: 56 IRLRGLPWSATHKEILDFLENVN-VTNGSQGIHLVTSRVDGKNTGEAYVEVASQEDVEEA 114
Query: 201 LLRHKEKIGHRLVTLVMS 218
+K +GHR + + +
Sbjct: 115 RKLNKASMGHRYIEVFTA 132
>gi|198454671|ref|XP_002137931.1| GA27490 [Drosophila pseudoobscura pseudoobscura]
gi|198132901|gb|EDY68489.1| GA27490 [Drosophila pseudoobscura pseudoobscura]
Length = 610
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 87/181 (48%), Gaps = 49/181 (27%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
G+++GEA VE ++ +D + A + +K++MG RYIE++ +KEA R GG G
Sbjct: 93 GKNTGEAYVEVATQEDVEEARKLNKASMGHRYIEVFTATPKEAKEAM-RKIGGHG----- 146
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
+ ++L+GLPY ++ +
Sbjct: 147 -----------------------------------------NAFVVKLRGLPYAVTEQQI 165
Query: 160 EKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVM 217
E+F GLEI + GI D GR TG A++QF +E+ E+AL R++EKIGHR + +
Sbjct: 166 EEFFTGLEIKTDREGILFVMDRRGRATGEAFVQFESQEDTEQALGRNREKIGHRYIEIFR 225
Query: 218 S 218
S
Sbjct: 226 S 226
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 5 FYVIDI--LIHITYCLLCSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQR 62
+Y I + L + ++ +FF+P+ P N+ + + G SG AD F + +D+Q A++R
Sbjct: 496 YYTIHMRGLPYTSFENDVFKFFEPVRPANVRINYNKKGLHSGTADAYFDTYEDSQIAMKR 555
Query: 63 HKSNMGDRYIELYME 77
H+ MG RYIEL+ +
Sbjct: 556 HREQMGSRYIELFYD 570
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
GS V+ + ++GLPY + DV KF E + P + I ++ G +G A F E+
Sbjct: 491 GSDVEYYTIHMRGLPYTSFENDVFKFFE--PVRPANVRINYNKKGLHSGTADAYFDTYED 548
Query: 197 AEKALLRHKEKIGHRLVTLVMSG 219
++ A+ RH+E++G R + L G
Sbjct: 549 SQIAMKRHREQMGSRYIELFYDG 571
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 32/44 (72%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
IL + D GR++GEA V+F S +D ++AL R++ +G RYIE++
Sbjct: 181 ILFVMDRRGRATGEAFVQFESQEDTEQALGRNREKIGHRYIEIF 224
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIV--PNGI-TIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+RL+GLP+ +++ FLE + + GI + G+ TG AY++ +E+ E+A
Sbjct: 54 IRLRGLPWSATHKEILDFLENVNVTNASQGIHLVTSRVDGKNTGEAYVEVATQEDVEEAR 113
Query: 202 LRHKEKIGHRLVTLVMS 218
+K +GHR + + +
Sbjct: 114 KLNKASMGHRYIEVFTA 130
>gi|195501785|ref|XP_002097942.1| GE10080 [Drosophila yakuba]
gi|194184043|gb|EDW97654.1| GE10080 [Drosophila yakuba]
Length = 597
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 49/181 (27%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
G+++GEA VE +S +D + A + +K++MG RYIE++ +KEA
Sbjct: 91 GKNTGEAYVEVASQEDVEEARKLNKASMGHRYIEVFTATPKEAKEA-------------- 136
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
MR+ +SG ++L+GLPY ++ +
Sbjct: 137 ----------------MRK----------------ISGHGT-AFVVKLRGLPYAVTEQQI 163
Query: 160 EKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVM 217
E+F GLEI + GI D GR TG A++QF +++ E+AL R++EKIGHR + +
Sbjct: 164 EEFFSGLEIKTDREGILFVMDRRGRATGEAFVQFESQDDTEQALGRNREKIGHRYIEIFR 223
Query: 218 S 218
S
Sbjct: 224 S 224
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 5 FYVIDI--LIHITYCLLCSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQR 62
+Y I + L + ++ +FF+PI P N+ + + G SG AD F + +D+Q A++R
Sbjct: 483 YYTIHMRGLPYTSFENDVFKFFEPIRPANVRINYNKKGLHSGTADAYFDTYEDSQVAMKR 542
Query: 63 HKSNMGDRYIELYMEEGT 80
H+ MG RYIEL+ + T
Sbjct: 543 HREQMGSRYIELFYDGKT 560
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
G+ ++ + ++GLPY + DV KF E I P + I ++ G +G A F E+
Sbjct: 478 GNDIEYYTIHMRGLPYTSFENDVFKFFE--PIRPANVRINYNKKGLHSGTADAYFDTYED 535
Query: 197 AEKALLRHKEKIGHRLVTLVMSG 219
++ A+ RH+E++G R + L G
Sbjct: 536 SQVAMKRHREQMGSRYIELFYDG 558
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
IL + D GR++GEA V+F S DD ++AL R++ +G RYIE++
Sbjct: 179 ILFVMDRRGRATGEAFVQFESQDDTEQALGRNREKIGHRYIEIF 222
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 58/120 (48%), Gaps = 12/120 (10%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPH----DYAGRCTGVAYIQFVDKENAEKA 200
+RL+GLP+ +++ FLE + V NG + H G+ TG AY++ +E+ E+A
Sbjct: 52 VRLRGLPWSATHKEILDFLENVN-VTNGSSGIHLVTSRVDGKNTGEAYVEVASQEDVEEA 110
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVRSTICVLCHPLTPRSV 260
+K +GHR + + F + P + + ++ G+ + L + +T + +
Sbjct: 111 RKLNKASMGHRYIEV-------FTATPKEAKEAMRKISGHGTAFVVKLRGLPYAVTEQQI 163
>gi|194901932|ref|XP_001980505.1| GG17187 [Drosophila erecta]
gi|190652208|gb|EDV49463.1| GG17187 [Drosophila erecta]
Length = 595
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 49/181 (27%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
G+++GEA VE +S +D + A + +K++MG RYIE++ +KEA
Sbjct: 90 GKNTGEAYVEVASQEDVEEARKLNKASMGHRYIEVFTATPKEAKEA-------------- 135
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
MR+ +SG ++L+GLPY ++ +
Sbjct: 136 ----------------MRK----------------ISGHGT-AFVVKLRGLPYAVTEQQI 162
Query: 160 EKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVM 217
E+F GLEI + GI D GR TG A++QF +++ E+AL R++EKIGHR + +
Sbjct: 163 EEFFSGLEIKTDREGILFVMDRRGRATGEAFVQFESQDDTEQALGRNREKIGHRYIEIFR 222
Query: 218 S 218
S
Sbjct: 223 S 223
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 5 FYVIDI--LIHITYCLLCSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQR 62
+Y I + L + ++ +FF+PI P N+ + + G SG AD F + +D+Q A++R
Sbjct: 480 YYTIHMRGLPYTSFENDVFKFFEPIRPANVRINYNKKGLHSGTADAYFDTYEDSQVAMKR 539
Query: 63 HKSNMGDRYIELYMEEGT 80
H+ MG RYIEL+ + T
Sbjct: 540 HREQMGSRYIELFYDGKT 557
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
G+ ++ + ++GLPY + DV KF E I P + I ++ G +G A F E+
Sbjct: 475 GNDIEYYTIHMRGLPYTSFENDVFKFFE--PIRPANVRINYNKKGLHSGTADAYFDTYED 532
Query: 197 AEKALLRHKEKIGHRLVTLVMSG 219
++ A+ RH+E++G R + L G
Sbjct: 533 SQVAMKRHREQMGSRYIELFYDG 555
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
IL + D GR++GEA V+F S DD ++AL R++ +G RYIE++
Sbjct: 178 ILFVMDRRGRATGEAFVQFESQDDTEQALGRNREKIGHRYIEIF 221
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 12/120 (10%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPH----DYAGRCTGVAYIQFVDKENAEKA 200
+RL+GLP+ +++ FLE + V NG H G+ TG AY++ +E+ E+A
Sbjct: 51 VRLRGLPWSATHKEILDFLENVN-VTNGSAGIHLVTSRVDGKNTGEAYVEVASQEDVEEA 109
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVRSTICVLCHPLTPRSV 260
+K +GHR + + F + P + + ++ G+ + L + +T + +
Sbjct: 110 RKLNKASMGHRYIEV-------FTATPKEAKEAMRKISGHGTAFVVKLRGLPYAVTEQQI 162
>gi|195329730|ref|XP_002031563.1| GM26067 [Drosophila sechellia]
gi|194120506|gb|EDW42549.1| GM26067 [Drosophila sechellia]
Length = 563
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 49/181 (27%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
G+++GEA VE +S +D + A + +K++MG RYIE++ +KEA
Sbjct: 90 GKNTGEAYVEVASQEDVEEARKLNKASMGHRYIEVFTATPKEAKEA-------------- 135
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
MR+ +SG ++L+GLPY ++ +
Sbjct: 136 ----------------MRK----------------ISGHGT-AFVVKLRGLPYAVTEQQI 162
Query: 160 EKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVM 217
E+F GLEI + GI D GR TG A++QF +++ E+AL R++EKIGHR + +
Sbjct: 163 EEFFSGLEIKTDREGILFVMDRRGRATGEAFVQFESQDDTEQALGRNREKIGHRYIEIFR 222
Query: 218 S 218
S
Sbjct: 223 S 223
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 5 FYVIDI--LIHITYCLLCSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQR 62
+Y I + L + ++ +FF+PI P N+ + + G SG AD F + +D+Q A++R
Sbjct: 456 YYTIHMRGLPYTSFENDVFKFFEPIRPANVRINYNKKGLHSGTADAYFDTYEDSQVAMKR 515
Query: 63 HKSNMGDRYIELYMEEGT 80
H+ MG RYIEL+ + T
Sbjct: 516 HREQMGSRYIELFYDGKT 533
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
G+ V+ + ++GLPY + DV KF E I P + I ++ G +G A F E+
Sbjct: 451 GNDVEYYTIHMRGLPYTSFENDVFKFFE--PIRPANVRINYNKKGLHSGTADAYFDTYED 508
Query: 197 AEKALLRHKEKIGHRLVTLVMSG 219
++ A+ RH+E++G R + L G
Sbjct: 509 SQVAMKRHREQMGSRYIELFYDG 531
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
IL + D GR++GEA V+F S DD ++AL R++ +G RYIE++
Sbjct: 178 ILFVMDRRGRATGEAFVQFESQDDTEQALGRNREKIGHRYIEIF 221
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 12/120 (10%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPH----DYAGRCTGVAYIQFVDKENAEKA 200
+RL+GLP+ +++ FLE + V NG H G+ TG AY++ +E+ E+A
Sbjct: 51 VRLRGLPWSATHKEILDFLENVN-VTNGSAGIHLVTSRVDGKNTGEAYVEVASQEDVEEA 109
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVRSTICVLCHPLTPRSV 260
+K +GHR + + F + P + + ++ G+ + L + +T + +
Sbjct: 110 RKLNKASMGHRYIEV-------FTATPKEAKEAMRKISGHGTAFVVKLRGLPYAVTEQQI 162
>gi|195571637|ref|XP_002103809.1| GD20630 [Drosophila simulans]
gi|194199736|gb|EDX13312.1| GD20630 [Drosophila simulans]
Length = 587
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 49/181 (27%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
G+++GEA VE +S +D + A + +K++MG RYIE++ +KEA
Sbjct: 90 GKNTGEAYVEVASQEDVEEARKLNKASMGHRYIEVFTATPKEAKEA-------------- 135
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
MR+ +SG ++L+GLPY ++ +
Sbjct: 136 ----------------MRK----------------ISGHGT-AFVVKLRGLPYAVTEQQI 162
Query: 160 EKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVM 217
E+F GLEI + GI D GR TG A++QF +++ E+AL R++EKIGHR + +
Sbjct: 163 EEFFSGLEIKTDREGILFVMDRRGRATGEAFVQFESQDDTEQALGRNREKIGHRYIEIFR 222
Query: 218 S 218
S
Sbjct: 223 S 223
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 5 FYVIDI--LIHITYCLLCSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQR 62
+Y I + L + ++ +FF+PI P N+ + + G SG AD F + +D+Q A++R
Sbjct: 480 YYTIHMRGLPYTSFENDVFKFFEPIRPANVRINYNKKGLHSGTADAYFDTYEDSQVAMKR 539
Query: 63 HKSNMGDRYIELYMEEGT 80
H+ MG RYIEL+ + T
Sbjct: 540 HREQMGSRYIELFYDGKT 557
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
G+ V+ + ++GLPY + DV KF E I P + I ++ G +G A F E+
Sbjct: 475 GNDVEYYTIHMRGLPYTSFENDVFKFFE--PIRPANVRINYNKKGLHSGTADAYFDTYED 532
Query: 197 AEKALLRHKEKIGHRLVTLVMSG 219
++ A+ RH+E++G R + L G
Sbjct: 533 SQVAMKRHREQMGSRYIELFYDG 555
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
IL + D GR++GEA V+F S DD ++AL R++ +G RYIE++
Sbjct: 178 ILFVMDRRGRATGEAFVQFESQDDTEQALGRNREKIGHRYIEIF 221
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 12/120 (10%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPH----DYAGRCTGVAYIQFVDKENAEKA 200
+RL+GLP+ +++ FLE + V NG H G+ TG AY++ +E+ E+A
Sbjct: 51 VRLRGLPWSATHKEILDFLENVN-VTNGSAGIHLVTSRVDGKNTGEAYVEVASQEDVEEA 109
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVRSTICVLCHPLTPRSV 260
+K +GHR + + F + P + + ++ G+ + L + +T + +
Sbjct: 110 RKLNKASMGHRYIEV-------FTATPKEAKEAMRKISGHGTAFVVKLRGLPYAVTEQQI 162
>gi|195037855|ref|XP_001990376.1| GH18272 [Drosophila grimshawi]
gi|193894572|gb|EDV93438.1| GH18272 [Drosophila grimshawi]
Length = 622
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 86/181 (47%), Gaps = 49/181 (27%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
G+++GEA VE +S +D + A + +K +MG RYIE++ +KEA R TGG G
Sbjct: 102 GKNTGEAYVEVASQEDVEEARKLNKVSMGHRYIEVFTATPKEAKEAM-RKTGGHGHA--- 157
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++L+GLPY ++ +
Sbjct: 158 -------------------------------------------FVVKLRGLPYAVTEQQI 174
Query: 160 EKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVM 217
E+F GLEI + GI D GR TG A++QF +++ E+AL R++EKIGHR + +
Sbjct: 175 EEFFTGLEIKTDREGILFVMDRRGRATGEAFVQFESQDDTEQALGRNREKIGHRYIEIFR 234
Query: 218 S 218
S
Sbjct: 235 S 235
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
+FF+PI P N+ + + G SG AD F + +D+Q A++RH+ MG RYIEL+ + T
Sbjct: 537 KFFEPIRPANVRINYNKKGLHSGTADAYFDTYEDSQLAMKRHREQMGSRYIELFFDGKT 595
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENA 197
+ ++ + ++GLPY + DV KF E I P + I ++ G +G A F E++
Sbjct: 514 NDIEYYTIHMRGLPYNSFENDVFKFFE--PIRPANVRINYNKKGLHSGTADAYFDTYEDS 571
Query: 198 EKALLRHKEKIGHRLVTLVMSG 219
+ A+ RH+E++G R + L G
Sbjct: 572 QLAMKRHREQMGSRYIELFFDG 593
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
IL + D GR++GEA V+F S DD ++AL R++ +G RYIE++
Sbjct: 190 ILFVMDRRGRATGEAFVQFESQDDTEQALGRNREKIGHRYIEIF 233
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPH----DYAGRCTGVAYIQFVDKENAEKA 200
+RL+GLP+ +++ FL +E++ NG H G+ TG AY++ +E+ E+A
Sbjct: 63 IRLRGLPWSATHKEILDFLVNVEVI-NGSQGIHLVTSRVDGKNTGEAYVEVASQEDVEEA 121
Query: 201 LLRHKEKIGHRLVTLVMS 218
+K +GHR + + +
Sbjct: 122 RKLNKVSMGHRYIEVFTA 139
>gi|194744433|ref|XP_001954699.1| GF16612 [Drosophila ananassae]
gi|190627736|gb|EDV43260.1| GF16612 [Drosophila ananassae]
Length = 600
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 89/181 (49%), Gaps = 49/181 (27%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
G+++GEA VE S+ +D + A + +K++MG RYIE++ +KEA
Sbjct: 93 GKNTGEAYVEVSTQEDVEEARKLNKASMGHRYIEVFTATPKEAKEA-------------- 138
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
MR+ +SG + ++L+GLPY ++ +
Sbjct: 139 ----------------MRK----------------ISGHG-NAFVVKLRGLPYAVTEQQI 165
Query: 160 EKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVM 217
E+F GLEI + GI D GR TG A++QF +++ E+AL R++EKIGHR + +
Sbjct: 166 EEFFSGLEIKTDREGILFVMDRRGRATGEAFVQFESQDDTEQALGRNREKIGHRYIEIFR 225
Query: 218 S 218
S
Sbjct: 226 S 226
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+FF+PI P N+ + + G SG AD F + +D+Q A++RH+ MG RYIEL+ +
Sbjct: 504 KFFEPIRPANVRINYNKKGLHSGTADAYFDTYEDSQMAMKRHREQMGSRYIELFYD 559
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENA 197
+ ++ + ++GLPY + DV KF E I P + I ++ G +G A F E++
Sbjct: 481 NDIEHYTIHMRGLPYTSFENDVFKFFE--PIRPANVRINYNKKGLHSGTADAYFDTYEDS 538
Query: 198 EKALLRHKEKIGHRLVTLVMSG 219
+ A+ RH+E++G R + L G
Sbjct: 539 QMAMKRHREQMGSRYIELFYDG 560
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
IL + D GR++GEA V+F S DD ++AL R++ +G RYIE++
Sbjct: 181 ILFVMDRRGRATGEAFVQFESQDDTEQALGRNREKIGHRYIEIF 224
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPH----DYAGRCTGVAYIQFVDKENAEKA 200
+RL+GLP+ +++ FLE + + NG H G+ TG AY++ +E+ E+A
Sbjct: 54 IRLRGLPWSATHKEILDFLENVNVT-NGSQGIHLVTSRVDGKNTGEAYVEVSTQEDVEEA 112
Query: 201 LLRHKEKIGHRLVTLVMS 218
+K +GHR + + +
Sbjct: 113 RKLNKASMGHRYIEVFTA 130
>gi|24646105|ref|NP_650120.1| glorund, isoform A [Drosophila melanogaster]
gi|24646107|ref|NP_731639.1| glorund, isoform B [Drosophila melanogaster]
gi|7299517|gb|AAF54704.1| glorund, isoform A [Drosophila melanogaster]
gi|7299518|gb|AAF54705.1| glorund, isoform B [Drosophila melanogaster]
gi|19528177|gb|AAL90203.1| AT27789p [Drosophila melanogaster]
Length = 586
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 49/181 (27%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
G+++GEA VE +S +D + A + +K++MG RYIE++ +KEA
Sbjct: 90 GKNTGEAYVEVASQEDVEEARKLNKASMGHRYIEVFTATPKEAKEA-------------- 135
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
MR+ +SG ++L+GLPY ++ +
Sbjct: 136 ----------------MRK----------------ISGHGT-AFVVKLRGLPYAVTEQQI 162
Query: 160 EKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVM 217
E+F GL+I + GI D GR TG A++QF +++ E+AL R++EKIGHR + +
Sbjct: 163 EEFFSGLDIKTDREGILFVMDRRGRATGEAFVQFESQDDTEQALGRNREKIGHRYIEIFR 222
Query: 218 S 218
S
Sbjct: 223 S 223
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 5 FYVIDI--LIHITYCLLCSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQR 62
+Y I + L + ++ +FF+PI P N+ + + G SG AD F + +D+Q A++R
Sbjct: 480 YYTIHMRGLPYTSFENDVFKFFEPIRPANVRINYNKKGLHSGTADAYFDTYEDSQVAMKR 539
Query: 63 HKSNMGDRYIELYME 77
H+ MG RYIEL+ +
Sbjct: 540 HREQMGSRYIELFYD 554
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
G+ ++ + ++GLPY + DV KF E I P + I ++ G +G A F E+
Sbjct: 475 GNDIEYYTIHMRGLPYTSFENDVFKFFE--PIRPANVRINYNKKGLHSGTADAYFDTYED 532
Query: 197 AEKALLRHKEKIGHRLVTLVMSG 219
++ A+ RH+E++G R + L G
Sbjct: 533 SQVAMKRHREQMGSRYIELFYDG 555
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
IL + D GR++GEA V+F S DD ++AL R++ +G RYIE++
Sbjct: 178 ILFVMDRRGRATGEAFVQFESQDDTEQALGRNREKIGHRYIEIF 221
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 64/145 (44%), Gaps = 12/145 (8%)
Query: 120 KRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPH-- 177
++ E D + G + +RL+GLP+ +++ FLE + V NG H
Sbjct: 26 QQDEDDQYNEDGGGKIENVGESPKFVRLRGLPWSATHKEILDFLENVN-VTNGSAGIHLV 84
Query: 178 --DYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGAQWFLSPPLTNETPIS 235
G+ TG AY++ +E+ E+A +K +GHR + + F + P + +
Sbjct: 85 TSRVDGKNTGEAYVEVASQEDVEEARKLNKASMGHRYIEV-------FTATPKEAKEAMR 137
Query: 236 RLDLTGSPVRSTICVLCHPLTPRSV 260
++ G+ + L + +T + +
Sbjct: 138 KISGHGTAFVVKLRGLPYAVTEQQI 162
>gi|395754533|ref|XP_003779794.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein H-like [Pongo abelii]
Length = 440
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 58/103 (56%), Gaps = 9/103 (8%)
Query: 118 RAKRSEMDWALKRQGAVLSGSAVDQCCMRLQG--LPYECKKEDVEKFLEGLEIVPNGITI 175
++ EMD LK G D M G LP+EC KE++ +F LEIVPNGIT+
Sbjct: 86 KSNNVEMDGVLKHSGP-------DSSVMANDGFVLPFECSKEEIVQFFSWLEIVPNGITL 138
Query: 176 PHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
D+ GR TG A++Q+ +E AE L +HKE+I H + + S
Sbjct: 139 MVDFQGRSTGEAFVQYASQEIAENVLEKHKERIRHMYIKIFKS 181
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 93/233 (39%), Gaps = 41/233 (17%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY---- 75
QFF IVP I L+ D GRS+GEA V+++S + A+ L++HK + YI+++
Sbjct: 124 QFFSWLEIVPNGITLMVDFQGRSTGEAFVQYASQEIAENVLEKHKERIRHMYIKIFKSSR 183
Query: 76 ------------MEEGTSSKEANGRG--------------TGGFGGVKS-----TPYGVG 104
+ G + G+G G +GG Y G
Sbjct: 184 AEVRTXKKLMATQQPGPYDRPGAGKGHNSISRGDGFERMRCGAYGGSYGDYNDYNGYNDG 243
Query: 105 IFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLE 164
C S + + D + G+ + C+ + GLPY + D+ F
Sbjct: 244 YECGSDRFGRNFNYSFLGMSDHRYEDGGSTFQSTMGH--CVHMCGLPYRATENDIYNFFX 301
Query: 165 GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVM 217
+ I I D GR TG A ++FV E+A A+ + K HR V L +
Sbjct: 302 TAQSWRVHIVIGPD--GRVTGEANVEFVTXEDAVAAMSKDKANTHHRYVELFL 352
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF + ++ GR +GEA+VEF + +DA A+ + K+N RY+EL+++
Sbjct: 298 NFFXTAQSWRVHIVIGPDGRVTGEANVEFVTXEDAVAAMSKDKANTHHRYVELFLD 353
>gi|427792669|gb|JAA61786.1| Putative splicing factor hnrnp-f, partial [Rhipicephalus
pulchellus]
Length = 302
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 45/59 (76%)
Query: 163 LEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGAQ 221
+EGLEIVPNGIT+P DY GR TG A++QF ++ AEKA+ +HKEKIGHR + + S Q
Sbjct: 23 IEGLEIVPNGITLPTDYQGRSTGEAFVQFATRDIAEKAMGKHKEKIGHRYIEIFKSSLQ 81
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEAN 86
IVP I L TD GRS+GEA V+F++ D A++A+ +HK +G RYIE++ + A
Sbjct: 28 IVPNGITLPTDYQGRSTGEAFVQFATRDIAEKAMGKHKEKIGHRYIEIFKSSLQEIRSAV 87
Query: 87 GRGTGG----FGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS---- 138
G G G + PY M R R+ + + A GS
Sbjct: 88 GMGVPKMMRPMGSARPGPYDRAERFGGGPSRYGMGRGGRNFRGFVEEDGYADFGGSGGGA 147
Query: 139 --AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
+ + ++GLP+ + D+ +F + + P + + ++ +GR +G ++F E
Sbjct: 148 RFSATGHFVHMRGLPFRATERDIFEFFQPMN--PINVHLIYEDSGRPSGECDVEFATHEE 205
Query: 197 AEKALLRHKEKIGHRLVTLVMS 218
A KA+ + K + HR + L ++
Sbjct: 206 AVKAMSKDKAHMQHRYIELFLN 227
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF+P+ P+N+ L+ +D+GR SGE DVEF++ ++A +A+ + K++M RYIEL++ T
Sbjct: 172 EFFQPMNPINVHLIYEDSGRPSGECDVEFATHEEAVKAMSKDKAHMQHRYIELFLNS-TP 230
Query: 82 SKEANGRGTGGFG 94
S +G GGFG
Sbjct: 231 SGLNSGSNAGGFG 243
>gi|90018164|gb|ABD83895.1| hypothetical protein [Ictalurus punctatus]
Length = 157
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 70/154 (45%), Gaps = 43/154 (27%)
Query: 31 NILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGT 90
+I L GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 38 SIHLTYTREGRPSGEAFVELESEDELKIALKKDRETMGHRYVEVF--------------- 82
Query: 91 GGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGL 150
++ EMDW LK G + D +RL+GL
Sbjct: 83 ---------------------------KSNNVEMDWVLKHTGPNGPETEGDGL-VRLRGL 114
Query: 151 PYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCT 184
P+ C KE++ +F GLEIVPNGIT+P DY R T
Sbjct: 115 PFGCSKEEIVRFFSGLEIVPNGITLPVDYMWRST 148
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYA--GRCTGVAYIQFVDKENAEKALL 202
+R++GLP+ C ++V +F ++ NG +I Y GR +G A+++ ++ + AL
Sbjct: 9 VRVRGLPWSCSVDEVARFFSDCKVANNGTSIHLTYTREGRPSGEAFVELESEDELKIALK 68
Query: 203 RHKEKIGHRLVTLVMS 218
+ +E +GHR V + S
Sbjct: 69 KDRETMGHRYVEVFKS 84
>gi|341902820|gb|EGT58755.1| CBN-SYM-2 protein [Caenorhabditis brenneri]
Length = 761
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 20/218 (9%)
Query: 20 CSQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY-- 75
+QFF IVP I L GR +GE V+F+S + AL+RH++ + RYIE+Y
Sbjct: 223 VAQFFAGLDIVPGGIALCLSSEGRRNGEVLVQFASQESRDLALKRHRNFLLSRYIEVYKA 282
Query: 76 -----MEEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKR 130
M T E F + S P I +S+ +++ + +
Sbjct: 283 GLDEFMHVATGHPEHIRSFLPRFWLI-SPPSAPSIPGVSRSPCRFLTNFSLF-LSFPAFP 340
Query: 131 QGAVLSGSAV--------DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGR 182
SGS+ + +R++GLPY+C + F E L++ + I GR
Sbjct: 341 NPYFFSGSSTEAMEFVSANAVIVRMRGLPYDCSDNQIRAFFEPLKLTEKILFITRT-DGR 399
Query: 183 CTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGA 220
TG A++QF +E+A+K LL+H+ IG R + L S A
Sbjct: 400 PTGDAFVQFETEEDAQKGLLKHRHIIGQRYIELFKSTA 437
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D R +GLP++ + V +F GL+IVP GI + GR G +QF +E+ + A
Sbjct: 205 DNVVCRARGLPWQASDQHVAQFFAGLDIVPGGIALCLSSEGRRNGEVLVQFASQESRDLA 264
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RH+ + R + + +G F+
Sbjct: 265 LKRHRNFLLSRYIEVYKAGLDEFM 288
>gi|417409638|gb|JAA51317.1| Putative splicing factor hnrnp-f, partial [Desmodus rotundus]
Length = 315
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 48/68 (70%), Gaps = 3/68 (4%)
Query: 163 LEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG--- 219
+EGLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 5 VEGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFRSSRSE 64
Query: 220 AQWFLSPP 227
+ F PP
Sbjct: 65 IKGFYDPP 72
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K+NM RYIEL++
Sbjct: 180 IANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIELFLN 237
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 10 IVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 58
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+ ++GLP+ + D+ F L + I I D GR TG A ++FV E+A A+ +
Sbjct: 166 VHMRGLPFRATENDIANFFSPLNPIRVHIDIGAD--GRATGEADVEFVTHEDAVAAMSKD 223
Query: 205 KEKIGHRLVTLVMS 218
K + HR + L ++
Sbjct: 224 KNNMQHRYIELFLN 237
>gi|417409472|gb|JAA51238.1| Putative splicing factor hnrnp-f, partial [Desmodus rotundus]
Length = 300
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 48/68 (70%), Gaps = 3/68 (4%)
Query: 163 LEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG--- 219
+EGLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 5 VEGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFRSSRSE 64
Query: 220 AQWFLSPP 227
+ F PP
Sbjct: 65 IKGFYDPP 72
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K+NM RYIEL++
Sbjct: 165 IANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIELFLN 222
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 10 IVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 58
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+ ++GLP+ + D+ F L + I I D GR TG A ++FV E+A A+ +
Sbjct: 151 VHMRGLPFRATENDIANFFSPLNPIRVHIDIGAD--GRATGEADVEFVTHEDAVAAMSKD 208
Query: 205 KEKIGHRLVTLVMS 218
K + HR + L ++
Sbjct: 209 KNNMQHRYIELFLN 222
>gi|308464398|ref|XP_003094466.1| CRE-TWK-4 protein [Caenorhabditis remanei]
gi|308247695|gb|EFO91647.1| CRE-TWK-4 protein [Caenorhabditis remanei]
Length = 1026
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 93/203 (45%), Gaps = 44/203 (21%)
Query: 20 CSQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+QFF IVP I L GR +GE V+F++ + AL+RH++ + RYIE+Y
Sbjct: 599 VAQFFAGLDIVPGGIALCLSSEGRRNGEVLVQFATQESRDLALKRHRNFLLSRYIEVYKA 658
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
L ++M A S ++ +S
Sbjct: 659 G---------------------------------LDEFMHVATGSSIEAM-----EFVSA 680
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENA 197
+AV +R++GLPY+C + F E L++ + I GR TG A++QF +E+A
Sbjct: 681 NAV---IVRMRGLPYDCTDTQIRAFFEPLKLTDKILFITRT-DGRPTGDAFVQFETEEDA 736
Query: 198 EKALLRHKEKIGHRLVTLVMSGA 220
+K LL+H++ IG R + L S A
Sbjct: 737 QKGLLKHRQIIGQRYIELFKSTA 759
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D R +GLP++ + V +F GL+IVP GI + GR G +QF +E+ + A
Sbjct: 581 DNVVCRARGLPWQASDQHVAQFFAGLDIVPGGIALCLSSEGRRNGEVLVQFATQESRDLA 640
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RH+ + R + + +G F+
Sbjct: 641 LKRHRNFLLSRYIEVYKAGLDEFM 664
>gi|149033731|gb|EDL88527.1| G-rich RNA sequence binding factor 1 [Rattus norvegicus]
Length = 281
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 76/170 (44%), Gaps = 46/170 (27%)
Query: 50 FSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKSTPYGVGIFCIS 109
S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 1 MESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD------------------ 34
Query: 110 QFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV 169
AL + V A+ +RL+GLPY C ++D+ F GL IV
Sbjct: 35 -----------------ALMKSLQVKPTPALSDGVVRLRGLPYSCNEKDIVDFFAGLNIV 77
Query: 170 PNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
IT DY GR TG AY+QF + E A +ALL+H+E+IG+R + + S
Sbjct: 78 --DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPS 125
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++ S
Sbjct: 70 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIF----PS 125
Query: 82 SKEANGRGTGGFGGVK--STPYGVGI----FCISQFLAKWMRR---AKRSEMDWALKRQG 132
+ G G K S+P I + R A SE + L ++
Sbjct: 126 RRNEVRTHVGSHKGKKMVSSPTTKYITEPEVVFEEHEVNEDARPMTAFESEKEIELPKEM 185
Query: 133 AVLSGSAVDQCCM------RLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGV 186
+ AVD + ++GLP++ +D+ F L+ P IT+ + +G+ TG
Sbjct: 186 SDKLAEAVDFGAVPSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGE 243
Query: 187 AYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
A + F E+A A+L+ + + HR + L ++
Sbjct: 244 ADVHFDTHEDAVAAMLKDRSHVQHRYIELFLNS 276
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 220 NFFAPLKPVRITMEYSSSGKATGEADVHFDTHEDAVAAMLKDRSHVQHRYIELFL 274
>gi|341896441|gb|EGT52376.1| hypothetical protein CAEBREN_32196, partial [Caenorhabditis
brenneri]
Length = 616
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 92/203 (45%), Gaps = 44/203 (21%)
Query: 20 CSQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+QFF IVP I L GR +GE V+F+S + AL+RH++ + RYIE+Y
Sbjct: 199 VAQFFAGLDIVPCGIALCLSSEGRRNGEVLVQFASQESRDLALKRHRNFLLSRYIEVY-- 256
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
G L ++M A S + +S
Sbjct: 257 ------------KAG-------------------LDEFMHVATGSSTEAM-----EFVSA 280
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENA 197
+AV +R++GLPY+C + F E L++ + I GR TG A++QF +E+A
Sbjct: 281 NAV---IVRMRGLPYDCSDNQIRAFFEPLKLTEKILFITRT-DGRPTGDAFVQFETEEDA 336
Query: 198 EKALLRHKEKIGHRLVTLVMSGA 220
+K LL+H+ IG R + L S A
Sbjct: 337 QKGLLKHRHIIGQRYIELFKSTA 359
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%)
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
G+ D R +GLP++ + V +F GL+IVP GI + GR G +QF +E+
Sbjct: 177 GADGDNVVCRARGLPWQASDQHVAQFFAGLDIVPCGIALCLSSEGRRNGEVLVQFASQES 236
Query: 197 AEKALLRHKEKIGHRLVTLVMSGAQWFL 224
+ AL RH+ + R + + +G F+
Sbjct: 237 RDLALKRHRNFLLSRYIEVYKAGLDEFM 264
>gi|395857260|ref|XP_003801023.1| PREDICTED: G-rich sequence factor 1 [Otolemur garnettii]
Length = 528
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 83/188 (44%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S A R H+ MG +Y+E+Y E N
Sbjct: 230 IHFLLNRDGKRRGDALIEMESEXPAVRGRFVHRMYMGQQYVEVY--------EINNEDVD 281
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S AV+ +RL+GLP
Sbjct: 282 -----------------------------------ALMKSLQVKSPPAVNDGVVRLRGLP 306
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 307 YSCDEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 364
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 365 RYIEIFPS 372
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 94/210 (44%), Gaps = 18/210 (8%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++
Sbjct: 317 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 376
Query: 82 SKEANGRGTGGFGGVKSTPYGV-------------GIFCISQFLAKWMRRAKRSEMDWAL 128
+ G G + S+P G I A + + +
Sbjct: 377 VRTHVGAHKGK--KIASSPMAKYITEPEMVFEEHEGNEDIRPMTAFENEKEIELPKEMSE 434
Query: 129 KRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAY 188
K AV G+ + ++GLP++ +D+ F L+ P IT+ + +G+ TG A
Sbjct: 435 KLPEAVDFGATPSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEAD 492
Query: 189 IQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+ F E+A A+L+ + + HR + L ++
Sbjct: 493 VHFDTHEDAVAAMLKDRSHVHHRYIELFLN 522
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 467 NFFAPLKPVRITMEYSSSGKATGEADVHFDTHEDAVAAMLKDRSHVHHRYIELFL 521
>gi|327274272|ref|XP_003221902.1| PREDICTED: g-rich sequence factor 1-like [Anolis carolinensis]
Length = 485
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 102/211 (48%), Gaps = 12/211 (5%)
Query: 20 CSQFFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
S FF + ++I + D GR +GEA V+F++ + A +AL +HK +G+RYIE++ +
Sbjct: 269 ISDFFSGLSIIDITFVMDQRGRRKTGEAFVQFATPEMANQALLKHKEEIGNRYIEIFPSQ 328
Query: 79 GTSSKEANG--RGTGGFGGVKSTPYGVGIFCISQF------LAKWMRRAKRSEMDWALKR 130
+ + NG RG G + +F F +A + + A +R
Sbjct: 329 RSEIRTHNGFFRGKKMMGFPTTKQDSDSVFNEGDFNEALRPVAAYENAKEHELFKQAFER 388
Query: 131 QGAVLSGSAVDQC-CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYI 189
+ + + L+GLP++ +D+ F L+ P IT+ ++ +G+ TG A +
Sbjct: 389 PRDLQESRSFPSLHFVHLRGLPFQATAQDIINFFAPLK--PVRITMEYNSSGKATGEADV 446
Query: 190 QFVDKENAEKALLRHKEKIGHRLVTLVMSGA 220
F E+A A+ +++ + HR + L ++ +
Sbjct: 447 HFETHEDAIAAMAKNRSHVQHRYIELFLNSS 477
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 82/188 (43%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A VE S D AL++H+ +G RY+E++
Sbjct: 185 IHFLLNRDGKRRGDALVELESEQDVHNALEKHRRYLGQRYVEVF---------------- 228
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++D +K + S S + +RL+GLP
Sbjct: 229 --------------------------EIHNEDVDAIMKSLQSS-STSVTNDGVVRLRGLP 261
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C + D+ F GL I+ IT D GR TG A++QF E A +ALL+HKE+IG+
Sbjct: 262 YSCTEVDISDFFSGLSII--DITFVMDQRGRRKTGEAFVQFATPEMANQALLKHKEEIGN 319
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 320 RYIEIFPS 327
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 41/62 (66%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV I + + +G+++GEADV F + +DA A+ +++S++ RYIEL++ S
Sbjct: 420 NFFAPLKPVRITMEYNSSGKATGEADVHFETHEDAIAAMAKNRSHVQHRYIELFLNSSPS 479
Query: 82 SK 83
K
Sbjct: 480 RK 481
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVP--NGITIPHDYAGRCTGVAYIQFVDKENAE 198
D +R QGLPY C +EDV F G +I NGI + G+ G A ++ +++
Sbjct: 151 DVYLIRAQGLPYSCTEEDVLNFFAGSKIRNGVNGIHFLLNRDGKRRGDALVELESEQDVH 210
Query: 199 KALLRHKEKIGHRLVTL 215
AL +H+ +G R V +
Sbjct: 211 NALEKHRRYLGQRYVEV 227
>gi|147907062|ref|NP_001079993.1| RNA binding motif protein 12 [Xenopus laevis]
gi|37589430|gb|AAH59291.1| Rbm12-prov protein [Xenopus laevis]
Length = 877
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 13/184 (7%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I++LTD GR +G A V+ + D AL+R++ MG R+IE+ A R
Sbjct: 332 IVILTDPMGRHNGSALVKLITPHDTFEALKRNRMLMGQRFIEV--------SPATERQWI 383
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
GG VG + + + R+K + + G C+ L+GLP
Sbjct: 384 VNGGHMLKQQNVGHHGPPPLMQQLITRSKSPNPQSRPRSRSPHEHG-----FCVYLKGLP 438
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
YE + + V F + L IV + I I + G+ TG +++F ++E+ + AL RHK+ +G+R
Sbjct: 439 YEAENKHVIDFFKKLNIVEDSIYIAYGSNGKATGEGFLEFRNEEDYKSALCRHKQYMGNR 498
Query: 212 LVTL 215
V +
Sbjct: 499 FVQV 502
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 36/216 (16%)
Query: 22 QFFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
FFK IV +I + G+++GE +EF + +D + AL RHK MG+R+++++
Sbjct: 448 DFFKKLNIVEDSIYIAYGSNGKATGEGFLEFRNEEDYKSALCRHKQYMGNRFVQVHPITK 507
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKW-MRRAKRSEMDWALKRQGAVLSGS 138
+ E I I + + + K + +D + G L G
Sbjct: 508 KAMLEK-------------------IDMIHKKMQSYNYGEHKDAPLDAEFDKHGPRLWG- 547
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
L LPY ++D+ F EG I N + + D G+C G A +QF +++
Sbjct: 548 -------HLSNLPYSIMRKDISHFFISEGFAIDENFVQLLTDNNGQCIGQALVQFRSEDD 600
Query: 197 AEKALLRHKEKIGHRLVTLVMSGAQ----WFLSPPL 228
A K+ H++K+ R V L + A+ L+PPL
Sbjct: 601 ARKSERLHRKKLNGRDVFLHIVNAEERNDIELNPPL 636
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D + L GLP + D+++ GL I +GI I D GR G A ++ + + +A
Sbjct: 302 DDPYVCLHGLPLPVSEADIKELFHGLRI--DGIVILTDPMGRHNGSALVKLITPHDTFEA 359
Query: 201 LLRHKEKIGHRLVTLVMSGA-QWFLS 225
L R++ +G R + + + QW ++
Sbjct: 360 LKRNRMLMGQRFIEVSPATERQWIVN 385
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 125 DWALKRQGAVLSGSAVD-QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC 183
+ A+ ++GSA +R+Q +P+ +++ F G +++P + + G
Sbjct: 782 NMAVSGPPGFVAGSAKSGPTVIRVQNMPFTVTVDEILDFFYGYQLIPGSVCLKFSDKGMP 841
Query: 184 TGVAYIQFVDKENAEKALLRHKEK-IGHRLVTLVM 217
TG A + F ++ A A++ E+ IG R V L +
Sbjct: 842 TGEAMVAFESRDEAMAAVVDLNERPIGSRKVKLTL 876
>gi|118381178|ref|XP_001023750.1| hypothetical protein TTHERM_00245200 [Tetrahymena thermophila]
gi|89305517|gb|EAS03505.1| hypothetical protein TTHERM_00245200 [Tetrahymena thermophila
SB210]
Length = 570
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 111/239 (46%), Gaps = 38/239 (15%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEAN 86
I +I L D G+ SGEA V S D Q AL + + + R++E++ T+ E N
Sbjct: 294 IYKEDIAFLYDSEGKFSGEAYVRVYSQLDKQEALCYNLNKVEGRFVEIF---ETTENEFN 350
Query: 87 GRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEM--DWALKRQGAVLSGSAVDQCC 144
ISQF K R + E+ + V G+ V
Sbjct: 351 RAK------------------ISQFPEK---RNQDDELPNETQFDLNKIVTEGAGV---- 385
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+R++GLPY C +ED++KF +GL I+ GI GR G ++ F +K++A KAL H
Sbjct: 386 VRIRGLPYSCTEEDIKKFFKGLTILQGGIKRAI-LGGRPGGECFVIFQNKDDAHKALNFH 444
Query: 205 KEKIGHRLVTLVMSGAQWF---LSPPLTNETPI-SRLDLTGSPV---RSTICVLCHPLT 256
EKI +R + + ++ + F ++ N P+ S+ ++ P +ST+ V+ P +
Sbjct: 445 MEKIHNRFIEVFLATVKEFENYMAHNFVNSAPVYSKDNMPNIPQEKRKSTLMVMGMPFS 503
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 118 RAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPH 177
R K+S+ ++ R + Q +R++GLPY ++ ++ + L+ + I I +
Sbjct: 245 REKKSKNNYVRGRSPEPFKNLS-QQHFIRIRGLPYSAREPEIYELLKNIRIYKEDIAFLY 303
Query: 178 DYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGAQWF 223
D G+ +G AY++ + + ++AL + K+ R V + + F
Sbjct: 304 DSEGKFSGEAYVRVYSQLDKQEALCYNLNKVEGRFVEIFETTENEF 349
>gi|313233607|emb|CBY09778.1| unnamed protein product [Oikopleura dioica]
Length = 425
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 49/199 (24%)
Query: 22 QFFKPIVPV-----NILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
+FF IV + + GR +GEA +E + D ++A+ + ++ + DRYIE++
Sbjct: 38 EFFADIVDIVNGEAGVHFTLTKEGRPNGEAYIELETDADVEKAMIKDRTQLQDRYIEIF- 96
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
+A EMD+ L++
Sbjct: 97 -----------------------------------------KATTEEMDYVLEK--TERQ 113
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
+ + ++L+G+PY+C + + +FL L+I +G+ + D GR TG A++Q E+
Sbjct: 114 ANQPWENVVKLRGVPYKCTSDRIRQFLRELDIPAHGVVMVTDARGRNTGEAFVQLKSHEH 173
Query: 197 AEKALLRHKEKIGHRLVTL 215
AE+ALL+HKE I R + +
Sbjct: 174 AEQALLKHKECIDRRYIEV 192
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 41/208 (19%)
Query: 22 QFFKPI-VPVN-ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY---- 75
QF + + +P + ++++TD GR++GEA V+ S + A++AL +HK + RYIE++
Sbjct: 138 QFLRELDIPAHGVVMVTDARGRNTGEAFVQLKSHEHAEQALLKHKECIDRRYIEVFKATR 197
Query: 76 --MEEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGA 133
M + + S + G + S+ GVG+
Sbjct: 198 AEMSQASQSLHNHCNGDHYYSQQNSSLKGVGL---------------------------- 229
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVD 193
V + ++++G+P+ +E V F GL+ + + R TG A + F
Sbjct: 230 ----DGVYRHVVQMRGIPFRATEEQVRSFF-GLDFEISAVQFEIGADHRPTGRASVAFPT 284
Query: 194 KENAEKALLRHKEKIGHRLVTLVMSGAQ 221
E+AEKA+ + KE +G R + L++ +Q
Sbjct: 285 HEDAEKAMKKDKECMGKRYIELMILSSQ 312
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
FF PI ++I L G +G V F S + AL+R K N+GDRYIEL+
Sbjct: 346 FFDPIPILDIHLEMGPKG-PTGAGQVAFFSAQERSDALKRDKENIGDRYIELF 397
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPH---DYAGRCTGVAYIQFVDKENAEKA 200
+RL+GLPY C +V +F + + NG H GR G AYI+ + EKA
Sbjct: 21 VIRLRGLPYSCCGAEVVEFFADIVDIVNGEAGVHFTLTKEGRPNGEAYIELETDADVEKA 80
Query: 201 LLRHKEKIGHRLVTL 215
+++ + ++ R + +
Sbjct: 81 MIKDRTQLQDRYIEI 95
>gi|157111781|ref|XP_001651725.1| G-rich sequence factor-1, putative [Aedes aegypti]
gi|108878303|gb|EAT42528.1| AAEL005947-PB [Aedes aegypti]
Length = 491
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 48/180 (26%)
Query: 41 RSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKSTP 100
R +GEA + +++D +AL ++K+ +G RYIE++
Sbjct: 60 RQTGEAYLRMPTLEDQIKALDQNKATLGHRYIEVFT------------------------ 95
Query: 101 YGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVE 160
A + D A+ R+ + G V +R++GLP+ C EDV+
Sbjct: 96 ------------------ASDDQFDKAVNREESAEDGGPV----LRMRGLPWSCTTEDVK 133
Query: 161 KFLEGLEIVP--NGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+F GL I NGI + D GR +G A ++F A++A+ + KEKIG+R + L S
Sbjct: 134 RFFSGLTIKNGYNGIVLLLDQLGRASGEAIVEFATDAEADQAMSKQKEKIGNRYIELFRS 193
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
FF P+ PV + D GR SGE D F ++++A +A+++HK MG RYIEL+
Sbjct: 427 FFMPLRPVKCNVSFDSRGRPSGEGDAYFDTMEEAMKAMKKHKEKMGSRYIELF 479
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 135 LSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDK 194
S D C+ L+G+P+ C ++D+ F + + P + D GR +G F
Sbjct: 400 FSSGEQDLFCVHLRGMPFSCDEQDIYDFF--MPLRPVKCNVSFDSRGRPSGEGDAYFDTM 457
Query: 195 ENAEKALLRHKEKIGHRLVTL 215
E A KA+ +HKEK+G R + L
Sbjct: 458 EEAMKAMKKHKEKMGSRYIEL 478
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 22 QFFKPIVPVN----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+FF + N I+LL D GR+SGEA VEF++ +A +A+ + K +G+RYIEL+
Sbjct: 134 RFFSGLTIKNGYNGIVLLLDQLGRASGEAIVEFATDAEADQAMSKQKEKIGNRYIELFRS 193
Query: 78 EGTSSKEANGR 88
K A R
Sbjct: 194 STREMKWAENR 204
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RL+GLP+ + D+ FL G+EI I I + R TG AY++ E+ KAL ++
Sbjct: 24 IRLRGLPWNITEGDIRDFLSGVEIDQVHICI-NQMTKRQTGEAYLRMPTLEDQIKALDQN 82
Query: 205 KEKIGHRLVTLVMSGAQWF 223
K +GHR + + + F
Sbjct: 83 KATLGHRYIEVFTASDDQF 101
>gi|443682871|gb|ELT87306.1| hypothetical protein CAPTEDRAFT_189098 [Capitella teleta]
Length = 639
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 98/225 (43%), Gaps = 45/225 (20%)
Query: 33 LLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGG 92
L + + GR +GEA + F S + AL++HK ++G RYIE+Y A+G+
Sbjct: 204 LNIANQQGRRNGEALIRFESKEHRDLALRKHKHHLGQRYIEVY--------RASGKDFLN 255
Query: 93 FGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPY 152
G +T E L R + +Q +R++GLPY
Sbjct: 256 IAGGNNT-----------------------EAQAFLSRHS-----DSGNQVIVRMRGLPY 287
Query: 153 ECKKEDVEKFL----EGLEIVP--NGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKE 206
C E V +F + +E++ GI H GR TG A++ F + ++A +AL +H+E
Sbjct: 288 TCTAEQVLEFFRQGEQSVEVLDGDEGILFVHQADGRATGDAFVLFANDDDATRALSKHRE 347
Query: 207 KIGHRLVTLVMSGA---QWFLSPPLTNETPISRLDLTGSPVRSTI 248
IG R + L S Q L+ + TP + + P+ I
Sbjct: 348 SIGTRYIELFKSTTAEVQQVLNRSMDPRTPSTETEAILPPLLPQI 392
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 139 AVDQ-CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENA 197
AVD+ C +R +GLP++ +D+ +F +GL I + GR G A I+F KE+
Sbjct: 176 AVDEECVIRARGLPWQSSDQDIARFFQGLNIA--------NQQGRRNGEALIRFESKEHR 227
Query: 198 EKALLRHKEKIGHRLVTLVMSGAQWFLSPPLTNET 232
+ AL +HK +G R + + + + FL+ N T
Sbjct: 228 DLALRKHKHHLGQRYIEVYRASGKDFLNIAGGNNT 262
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL-RHK 205
++GLP+ + D+ F EG+ + + + GR TG AYI F + AE+A+ R++
Sbjct: 567 IKGLPFNVQVADILAFFEGIYEMQPDVQVQRGSDGRLTGEAYITFGSRSEAERAITERNR 626
Query: 206 EKIGHRLVTLVMS 218
+ IG+R V + M+
Sbjct: 627 KVIGNRFVEMFMA 639
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
IL + GR++G+A V F++ DDA RAL +H+ ++G RYIEL+
Sbjct: 314 ILFVHQADGRATGDAFVLFANDDDATRALSKHRESIGTRYIELF 357
>gi|25144421|ref|NP_740878.1| Protein HRPF-1, isoform b [Caenorhabditis elegans]
gi|351061233|emb|CCD68996.1| Protein HRPF-1, isoform b [Caenorhabditis elegans]
Length = 362
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 20/176 (11%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR+SG+A V F++ +D AL++ + ++G RYIE++ G ++ + RG G G +
Sbjct: 40 GRTSGDAKVVFTNEEDYNNALKKDREHLGSRYIEVFPAGGAPTRRGD-RGERGDRGDRD- 97
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
R D R G SG +RL+GLP+ D+
Sbjct: 98 ---------------HYRSRGAPPRDRYSDRGGPRSSGP---DSIVRLRGLPFSVTSRDI 139
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTL 215
FL L IV +GI +P R G AY+ F E+ + A RH + IGHR + +
Sbjct: 140 SDFLAPLPIVRDGILLPDQQRARPGGEAYVCFETMESVQIAKQRHMKNIGHRYIEV 195
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 29/50 (58%)
Query: 26 PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
PIV ILL R GEA V F +++ Q A QRH N+G RYIE++
Sbjct: 147 PIVRDGILLPDQQRARPGGEAYVCFETMESVQIAKQRHMKNIGHRYIEVF 196
>gi|71998567|ref|NP_495960.2| Protein SYM-2 [Caenorhabditis elegans]
gi|74966269|sp|Q22708.3|SYM2_CAEEL RecName: Full=RNA-binding protein sym-2; AltName: Full=Synthetic
lethal with mec-8 protein 2
gi|29165341|gb|AAO65265.1| putative RNA binding protein SYM-2 [Caenorhabditis elegans]
gi|33300449|emb|CAA93887.2| Protein SYM-2 [Caenorhabditis elegans]
Length = 618
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 44/203 (21%)
Query: 20 CSQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+QFF IVP I L GR +GE V+FSS + AL+RH++ + RYIE+Y
Sbjct: 197 VAQFFAGLDIVPGGIALCLSSEGRRNGEVLVQFSSQESRDLALKRHRNFLLSRYIEVY-- 254
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
G L ++M A S + +S
Sbjct: 255 ------------KAG-------------------LDEFMHVATGSSTEAM-----EFVSA 278
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENA 197
+A+ +R++GLPY+C + F E L++ + I GR TG A++QF +E+A
Sbjct: 279 NAI---IVRMRGLPYDCTDAQIRTFFEPLKLTDKILFITRT-DGRPTGDAFVQFETEEDA 334
Query: 198 EKALLRHKEKIGHRLVTLVMSGA 220
++ LL+H++ IG R + L S A
Sbjct: 335 QQGLLKHRQVIGQRYIELFKSTA 357
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%)
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
G+ D R +GLP++ V +F GL+IVP GI + GR G +QF +E+
Sbjct: 175 GADGDNVVCRARGLPWQASDHHVAQFFAGLDIVPGGIALCLSSEGRRNGEVLVQFSSQES 234
Query: 197 AEKALLRHKEKIGHRLVTLVMSGAQWFL 224
+ AL RH+ + R + + +G F+
Sbjct: 235 RDLALKRHRNFLLSRYIEVYKAGLDEFM 262
>gi|157111783|ref|XP_001651726.1| G-rich sequence factor-1, putative [Aedes aegypti]
gi|108878304|gb|EAT42529.1| AAEL005947-PA [Aedes aegypti]
Length = 471
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 48/180 (26%)
Query: 41 RSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKSTP 100
R +GEA + +++D +AL ++K+ +G RYIE++
Sbjct: 60 RQTGEAYLRMPTLEDQIKALDQNKATLGHRYIEVFT------------------------ 95
Query: 101 YGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVE 160
A + D A+ R+ + G V +R++GLP+ C EDV+
Sbjct: 96 ------------------ASDDQFDKAVNREESAEDGGPV----LRMRGLPWSCTTEDVK 133
Query: 161 KFLEGLEIVP--NGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+F GL I NGI + D GR +G A ++F A++A+ + KEKIG+R + L S
Sbjct: 134 RFFSGLTIKNGYNGIVLLLDQLGRASGEAIVEFATDAEADQAMSKQKEKIGNRYIELFRS 193
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
FF P+ PV + D GR SGE D F ++++A +A+++HK MG RYIEL+
Sbjct: 407 FFMPLRPVKCNVSFDSRGRPSGEGDAYFDTMEEAMKAMKKHKEKMGSRYIELF 459
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 135 LSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDK 194
S D C+ L+G+P+ C ++D+ F + + P + D GR +G F
Sbjct: 380 FSSGEQDLFCVHLRGMPFSCDEQDIYDFF--MPLRPVKCNVSFDSRGRPSGEGDAYFDTM 437
Query: 195 ENAEKALLRHKEKIGHRLVTL 215
E A KA+ +HKEK+G R + L
Sbjct: 438 EEAMKAMKKHKEKMGSRYIEL 458
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 22 QFFKPIVPVN----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+FF + N I+LL D GR+SGEA VEF++ +A +A+ + K +G+RYIEL+
Sbjct: 134 RFFSGLTIKNGYNGIVLLLDQLGRASGEAIVEFATDAEADQAMSKQKEKIGNRYIELFRS 193
Query: 78 EGTSSKEANGR 88
K A R
Sbjct: 194 STREMKWAENR 204
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RL+GLP+ + D+ FL G+EI I I + R TG AY++ E+ KAL ++
Sbjct: 24 IRLRGLPWNITEGDIRDFLSGVEIDQVHICI-NQMTKRQTGEAYLRMPTLEDQIKALDQN 82
Query: 205 KEKIGHRLVTLVMSGAQWF 223
K +GHR + + + F
Sbjct: 83 KATLGHRYIEVFTASDDQF 101
>gi|301606650|ref|XP_002932936.1| PREDICTED: RNA-binding protein 12 [Xenopus (Silurana) tropicalis]
Length = 880
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 13/184 (7%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I++L D GR +G A V+ + D AL+R++ +G R+IE+ A R
Sbjct: 335 IVVLKDPMGRHNGSALVKLITPHDTFEALKRNRMLLGQRFIEV--------SPATERQWM 386
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
G P VG + + + R+K + + G C+ L+GLP
Sbjct: 387 VSAGHILKPQNVGHHGPPPLMQQLITRSKSPSTQSRPRSRSPHEHG-----FCVYLKGLP 441
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
YE + + V F + L+IV + I I + G+ TG +++F ++E+ + AL RHK+ +G+R
Sbjct: 442 YEAENKHVIDFFKKLDIVEDSIYIAYGSNGKATGEGFLEFRNEEDYKSALCRHKQYMGNR 501
Query: 212 LVTL 215
V +
Sbjct: 502 FVQV 505
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 36/216 (16%)
Query: 22 QFFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
FFK IV +I + G+++GE +EF + +D + AL RHK MG+R+++++
Sbjct: 451 DFFKKLDIVEDSIYIAYGSNGKATGEGFLEFRNEEDYKSALCRHKQYMGNRFVQVHPITK 510
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKW-MRRAKRSEMDWALKRQGAVLSGS 138
+ E I I + + + K + +D ++ G L G
Sbjct: 511 KAMLEK-------------------IDMIRKKMQSYNYSEHKDAPLDAEFEKHGPRLWG- 550
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
L LPY ++D+ F EG I N + + D G+C G A +QF +++
Sbjct: 551 -------HLSNLPYSIMRKDISHFFISEGFAIDENFVQLLVDNNGQCIGQALVQFRSEDD 603
Query: 197 AEKALLRHKEKIGHRLVTLVMSGAQ----WFLSPPL 228
A K+ H++K+ R V L + ++ L+PPL
Sbjct: 604 ARKSERLHRKKLNGRDVFLHIVNSEERKDIELNPPL 639
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D + L GLP + D++ F GL I +GI + D GR G A ++ + + +A
Sbjct: 305 DDPYVCLHGLPVPVSEADIKDFFHGLRI--DGIVVLKDPMGRHNGSALVKLITPHDTFEA 362
Query: 201 LLRHKEKIGHRLVTLVMSGA-QWFLS 225
L R++ +G R + + + QW +S
Sbjct: 363 LKRNRMLLGQRFIEVSPATERQWMVS 388
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 132 GAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQF 191
GA SG V +R+Q +P+ +++ F G +++P + + G TG A + F
Sbjct: 797 GAAKSGPTV----IRVQNMPFTVTVDEILDFFYGYQLIPGSVCLKFSDKGMPTGEAMVAF 852
Query: 192 VDKENAEKALLRHKEK-IGHRLVTLVM 217
++ A A++ ++ IG R V L +
Sbjct: 853 ESRDEAMAAVVDLNDRPIGSRKVKLTL 879
>gi|328716236|ref|XP_001946855.2| PREDICTED: RNA-binding protein fusilli-like [Acyrthosiphon pisum]
Length = 858
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 46/185 (24%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR +GEA V F + + A++RHK ++G RYIE+Y +ANG G S+
Sbjct: 304 GRRNGEAVVRFVNQEHRDMAMKRHKHHIGSRYIEVY--------KANGEDFINVAGGNSS 355
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
FL K GA Q +R++GLPY+C +DV
Sbjct: 356 E-------AQTFLTK-----------------GA--------QVIVRMRGLPYDCTAKDV 383
Query: 160 EKFLEGLEIV------PNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLV 213
F E E +G+ GR TG A++ F D+++A KAL +H++ IG R +
Sbjct: 384 ITFFENGEQTCSVMDGEDGVLFVKKPDGRATGDAFVLFADEDDAPKALSKHRDLIGTRYI 443
Query: 214 TLVMS 218
L S
Sbjct: 444 ELFRS 448
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 83/177 (46%), Gaps = 10/177 (5%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+L + GR++G+A V F+ DDA +AL +H+ +G RYIEL+ ++ R
Sbjct: 403 VLFVKKPDGRATGDAFVLFADEDDAPKALSKHRDLIGTRYIELFRSTTAEVQQVLNRAMD 462
Query: 92 GFGGVKSTPY----GVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRL 147
V+ST + + A + Q + SG+ D C+RL
Sbjct: 463 --PSVRSTASDSNGNITTPVTTTAGVNNSPTALLGHVPLLPLPQHVITSGTRKD--CIRL 518
Query: 148 QGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+GLPYE E + +FL IV G+ + ++ G +G A+IQ ++ +A +A +
Sbjct: 519 RGLPYEANVEHILEFLGEHSKNIVFQGVHMVYNSVGHASGEAFIQMNNEGSAAQAAM 575
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 49/85 (57%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C +R +GLP++ +D+ KF GL I G+ + GR G A ++FV++E+ + A
Sbjct: 264 NNCVVRARGLPWQSSDQDIAKFFRGLNIAKGGVALCLSAHGRRNGEAVVRFVNQEHRDMA 323
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFLS 225
+ RHK IG R + + + + F++
Sbjct: 324 MKRHKHHIGSRYIEVYKANGEDFIN 348
>gi|25144418|ref|NP_740877.1| Protein HRPF-1, isoform a [Caenorhabditis elegans]
gi|351061232|emb|CCD68995.1| Protein HRPF-1, isoform a [Caenorhabditis elegans]
Length = 549
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 20/176 (11%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR+SG+A V F++ +D AL++ + ++G RYIE++ G ++ + RG G G +
Sbjct: 40 GRTSGDAKVVFTNEEDYNNALKKDREHLGSRYIEVFPAGGAPTRRGD-RGERGDRGDRD- 97
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
R D R G SG +RL+GLP+ D+
Sbjct: 98 ---------------HYRSRGAPPRDRYSDRGGPRSSGP---DSIVRLRGLPFSVTSRDI 139
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTL 215
FL L IV +GI +P R G AY+ F E+ + A RH + IGHR + +
Sbjct: 140 SDFLAPLPIVRDGILLPDQQRARPGGEAYVCFETMESVQIAKQRHMKNIGHRYIEV 195
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 23 FFKPIVPVNILLLTDDA-GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
FF PI P + LL D R SG+A V F + D AL + K MG+RYIE+ + G
Sbjct: 490 FFHPIRPNQVELLRDHQFQRPSGDARVIFYNRKDYDDALMKDKQYMGERYIEMIPDNG 547
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 29/50 (58%)
Query: 26 PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
PIV ILL R GEA V F +++ Q A QRH N+G RYIE++
Sbjct: 147 PIVRDGILLPDQQRARPGGEAYVCFETMESVQIAKQRHMKNIGHRYIEVF 196
>gi|37932182|gb|AAP69824.1| SWAN ribonucleoprotein [Xenopus laevis]
Length = 877
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 13/184 (7%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I++LTD GR +G A V+ + D AL+R++ MG R+IE+ A R
Sbjct: 332 IVILTDPMGRHNGSALVKLITPHDTFEALKRNRMLMGQRFIEV--------SPATERQWI 383
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
GG VG + + + R+K + + G C+ L+GLP
Sbjct: 384 VNGGHMLKQQNVGHHGPPPLMQQLITRSKSPNPQSRPRSRSPHEHG-----FCVYLKGLP 438
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+E + + V F + L IV + I I + G+ TG +++F ++E+ + AL RHK+ +G+R
Sbjct: 439 HEAENKHVIDFFKKLNIVEDSIYIAYGSNGKATGEGFLEFRNEEDYKSALCRHKQYMGNR 498
Query: 212 LVTL 215
V +
Sbjct: 499 FVQV 502
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 36/216 (16%)
Query: 22 QFFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
FFK IV +I + G+++GE +EF + +D + AL RHK MG+R+++++
Sbjct: 448 DFFKKLNIVEDSIYIAYGSNGKATGEGFLEFRNEEDYKSALCRHKQYMGNRFVQVHPITK 507
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKW-MRRAKRSEMDWALKRQGAVLSGS 138
+ E I I + + + K + +D + G L G
Sbjct: 508 KAMLEK-------------------IDMIHKKMQSYNYGEHKDAPLDAEFDKHGPRLWG- 547
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
L LPY ++D+ F EG I N + + D G+C G A +QF +++
Sbjct: 548 -------HLSNLPYSIMRKDISHFFISEGFAIDENAVQLLTDNNGQCIGQALVQFRSEDD 600
Query: 197 AEKALLRHKEKIGHRLVTLVMSGAQ----WFLSPPL 228
A K+ H++K+ R V L + A+ L+PPL
Sbjct: 601 ARKSERLHRKKLNGRDVFLHIVNAEERNDIELNPPL 636
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D + L GLP + D+++ GL I +GI I D GR G A ++ + + +A
Sbjct: 302 DDPYVCLHGLPLPVSEADIKELFHGLRI--DGIVILTDPMGRHNGSALVKLITPHDTFEA 359
Query: 201 LLRHKEKIGHRLVTLVMSGA-QWFLS 225
L R++ +G R + + + QW ++
Sbjct: 360 LKRNRMLMGQRFIEVSPATERQWIVN 385
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 125 DWALKRQGAVLSGSAVD-QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC 183
+ A+ ++GSA +R+Q +P+ +++ F G +++P + + G
Sbjct: 782 NMAVSGPPGFVAGSAKSGPTVIRVQNMPFTVTVDEILDFFYGYQLIPGSVCLKFSDKGMP 841
Query: 184 TGVAYIQFVDKENAEKALLRHKEK-IGHRLVTLVM 217
TG A + F ++ A A++ E+ IG R V L +
Sbjct: 842 TGEAMVAFESRDEAMAAVVDLNERPIGSRKVKLTL 876
>gi|356531343|ref|XP_003534237.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like isoform
2 [Glycine max]
Length = 257
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 21/197 (10%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF + V++LL+ + +GR SGEA V F+ + ALQR + NMG RY+E++ +
Sbjct: 68 KFFAGLTIVDVLLV-NKSGRFSGEAFVVFAGAMQVEFALQRDRQNMGRRYVEVFRCKKQD 126
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
A G + G+ Y S ++ R + +M++
Sbjct: 127 YYNAVA-GEINYEGIYDNDY----HGSSPPPSRLKRFNDKDQMEYTE------------- 168
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
++++GLP++ K + +F + +++ + + I G+ TG AY++FV E A++A+
Sbjct: 169 --ILKMRGLPFQVTKSQIVEFFKDFKLIEDRVHIACRPDGKATGEAYVEFVSAEEAKRAM 226
Query: 202 LRHKEKIGHRLVTLVMS 218
+ K IG R V L S
Sbjct: 227 SKDKMTIGSRYVELFPS 243
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP+ C D+ KF GL IV + + +GR +G A++ F E AL R
Sbjct: 51 VVRLRGLPFNCTDIDILKFFAGLTIVD---VLLVNKSGRFSGEAFVVFAGAMQVEFALQR 107
Query: 204 HKEKIGHRLVTLVMSGAQWFLS 225
++ +G R V + Q + +
Sbjct: 108 DRQNMGRRYVEVFRCKKQDYYN 129
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGR 88
G+++GEA VEF S ++A+RA+ + K +G RY+EL+ ++ A R
Sbjct: 206 GKATGEAYVEFVSAEEAKRAMSKDKMTIGSRYVELFPSTPDEARRAESR 254
>gi|242017929|ref|XP_002429436.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212514368|gb|EEB16698.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 766
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 85/194 (43%), Gaps = 47/194 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ L AGR +GEA V F + AL+RHK +MG RYIE+Y G
Sbjct: 224 VALCLSPAGRRNGEALVRFVNQAHRDMALKRHKHHMGQRYIEVYKSTG------------ 271
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+F+ ++ +E L R G Q +R++GLP
Sbjct: 272 -----------------EEFV--FVAGGSSTEAHNFLTRGG---------QVIIRMRGLP 303
Query: 152 YECKKEDVEKFL-----EGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
YEC E V +F E++ +G+ GR TG A++ F ++ +A KAL +H
Sbjct: 304 YECTAEQVLEFFRTGENNTCEVLDGEDGVLFVKKSDGRATGDAFVLFSNESDAPKALSKH 363
Query: 205 KEKIGHRLVTLVMS 218
+E+IG R + L S
Sbjct: 364 RERIGSRYIELFRS 377
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 83/178 (46%), Gaps = 21/178 (11%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+L + GR++G+A V FS+ DA +AL +H+ +G RYIEL+ ++ R
Sbjct: 332 VLFVKKSDGRATGDAFVLFSNESDAPKALSKHRERIGSRYIELFRSTTAEVQQVLNRA-- 389
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+ P V + Q ++ + SG++ + C+RL+GLP
Sbjct: 390 -----QEDPKPVPVQLPPQLPTPLPTTLYPQQL---------ITSGTS--KNCIRLRGLP 433
Query: 152 YECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENA-EKALLRHKE 206
YE + E + FL IV G+ + ++ G+ +G A+IQ + +A A RH +
Sbjct: 434 YEAQVEHILDFLGDYAKNIVFQGVHMVYNSHGQPSGEAFIQMDSEASAFHAANHRHHQ 491
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+R +GLP++ D+ +F GL I G+ + AGR G A ++FV++ + + AL
Sbjct: 193 NSVVRARGLPWQSSDGDIARFFRGLNIEKGGVALCLSPAGRRNGEALVRFVNQAHRDMAL 252
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + S + F+
Sbjct: 253 KRHKHHMGQRYIEVYKSTGEEFV 275
>gi|241339179|ref|XP_002408443.1| splicing factor hnRNP-F, putative [Ixodes scapularis]
gi|215497357|gb|EEC06851.1| splicing factor hnRNP-F, putative [Ixodes scapularis]
Length = 293
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 85/222 (38%), Gaps = 86/222 (38%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA +E S D + LQRH ++G RYIE++
Sbjct: 34 GRPSGEAYIELESEQDVEVGLQRHNEHIGHRYIEVF------------------------ 69
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++KRSEMDW +KR GA S D C+RL+GLP+ C KE++
Sbjct: 70 ------------------KSKRSEMDWVVKRSGAHQQDSLND-GCVRLRGLPFGCSKEEI 110
Query: 160 EKFLEGL-------------------------------------------EIVPNGITIP 176
+F G + P + +
Sbjct: 111 AQFFSGFVEEDGYGDFGGSGGARYSATGHFVHMRGLPFRATERDIFEFFQPMNPMNVHLI 170
Query: 177 HDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
++ +GR +G ++F E A KA+ + K + HR + L ++
Sbjct: 171 YEDSGRPSGECDVEFATHEEAVKAMSKDKAHMQHRYIELFLN 212
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 44/55 (80%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
+FF+P+ P+N+ L+ +D+GR SGE DVEF++ ++A +A+ + K++M RYIEL++
Sbjct: 157 EFFQPMNPMNVHLIYEDSGRPSGECDVEFATHEEAVKAMSKDKAHMQHRYIELFL 211
>gi|356531341|ref|XP_003534236.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like isoform
1 [Glycine max]
Length = 264
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 21/197 (10%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF + V++LL+ + +GR SGEA V F+ + ALQR + NMG RY+E++ +
Sbjct: 75 KFFAGLTIVDVLLV-NKSGRFSGEAFVVFAGAMQVEFALQRDRQNMGRRYVEVFRCKKQD 133
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
A G + G+ Y S ++ R + +M++
Sbjct: 134 YYNAVA-GEINYEGIYDNDY----HGSSPPPSRLKRFNDKDQMEYTE------------- 175
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
++++GLP++ K + +F + +++ + + I G+ TG AY++FV E A++A+
Sbjct: 176 --ILKMRGLPFQVTKSQIVEFFKDFKLIEDRVHIACRPDGKATGEAYVEFVSAEEAKRAM 233
Query: 202 LRHKEKIGHRLVTLVMS 218
+ K IG R V L S
Sbjct: 234 SKDKMTIGSRYVELFPS 250
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP+ C D+ KF GL IV + + +GR +G A++ F E AL R
Sbjct: 58 VVRLRGLPFNCTDIDILKFFAGLTIVD---VLLVNKSGRFSGEAFVVFAGAMQVEFALQR 114
Query: 204 HKEKIGHRLVTL 215
++ +G R V +
Sbjct: 115 DRQNMGRRYVEV 126
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGR 88
G+++GEA VEF S ++A+RA+ + K +G RY+EL+ ++ A R
Sbjct: 213 GKATGEAYVEFVSAEEAKRAMSKDKMTIGSRYVELFPSTPDEARRAESR 261
>gi|384253335|gb|EIE26810.1| hypothetical protein COCSUDRAFT_46239 [Coccomyxa subellipsoidea
C-169]
Length = 877
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 88/181 (48%), Gaps = 7/181 (3%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR GEA VEF S D + AL+RHK+ +GDRYIEL++ + +A + G +
Sbjct: 362 GRPKGEAYVEFPSEDAQKEALKRHKNEIGDRYIELFVSSKANMIQAVQQSNYYLGQSQHA 421
Query: 100 PYGVGIFCISQFLAKWMRRAK-RSEMDWALKRQGAVL-SGSAVDQCCMRLQGLPYECKKE 157
+ L A + A QGA + S + D +RL+GLPY +
Sbjct: 422 MGPSLLPHPLPPLPLHGPLASFGAPYGHAPYGQGAPMQSVVSADGSTLRLRGLPYSAGID 481
Query: 158 DVEKFLEGLEIVPNGITI--PHDYAGR--CTGVAYIQFVDKENAEKALL-RHKEKIGHRL 212
++ F G + +GI + D G TGVAY++F + E AE+A RH+ ++G R
Sbjct: 482 EITSFFAGFSLASDGIQVVTKPDKEGNQLGTGVAYVRFGNPEEAERARKERHRAQMGARY 541
Query: 213 V 213
+
Sbjct: 542 I 542
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+R++GLPY EDV F EG+EI GI GR G AY++F ++ ++AL
Sbjct: 323 VLRMRGLPYGATAEDVVHFFEGIEIERGSAGIAFTCTPDGRPKGEAYVEFPSEDAQKEAL 382
Query: 202 LRHKEKIGHRLVTLVMS 218
RHK +IG R + L +S
Sbjct: 383 KRHKNEIGDRYIELFVS 399
>gi|123704039|ref|NP_001074045.1| epithelial splicing regulatory protein 1 [Danio rerio]
gi|143360736|sp|A1L1G1.1|ESRP1_DANRE RecName: Full=Epithelial splicing regulatory protein 1; AltName:
Full=RNA-binding motif protein 35A; AltName:
Full=RNA-binding protein 35A
gi|120537378|gb|AAI29045.1| RNA binding motif protein 35A [Danio rerio]
Length = 714
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 95/209 (45%), Gaps = 30/209 (14%)
Query: 22 QFFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
QFF P PV IL + GR +G+A V FS + AQ AL++HK +G RYIEL+
Sbjct: 344 QFFSPACPVTDGSEGILFVRFPDGRPTGDAFVLFSCEEHAQNALKKHKDMLGKRYIELFK 403
Query: 77 EEGTSSKEA-NGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVL 135
++ N + V +P + + F+ Q A +
Sbjct: 404 STAAEVQQVLNKYSSAPLIPVAPSPI-LSVVAPPTFVP-----------------QTAAV 445
Query: 136 SGSAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVD 193
G + C+RL+GLPY+ +D+ FL G +I +G+ + ++ GR +G A+IQ
Sbjct: 446 PGV---RDCVRLRGLPYDASIQDILVFLGEYGADIKTHGVHMVLNHQGRPSGEAFIQMRS 502
Query: 194 KENAEKALLR-HKEKIGHRLVTLVMSGAQ 221
E A A R HK + R V + AQ
Sbjct: 503 AERAFLAAQRCHKRSMKERYVEVFACSAQ 531
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 90/221 (40%), Gaps = 50/221 (22%)
Query: 34 LLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGF 93
L + GR +GEA V F S + ALQRHK +MG RYIE+Y G + G GT
Sbjct: 257 LCLNAQGRRNGEALVRFESEEHRDLALQRHKHHMGGRYIEVYKATGEDFLKIAG-GT--- 312
Query: 94 GGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYE 153
S +A ++ R +Q +R++GLP+
Sbjct: 313 ---------------SNEVASFLSRE---------------------NQIIVRMRGLPFN 336
Query: 154 CKKEDVEKFLEGLEIVPN---GITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGH 210
E V +F V + GI GR TG A++ F +E+A+ AL +HK+ +G
Sbjct: 337 ATAEQVLQFFSPACPVTDGSEGILFVRFPDGRPTGDAFVLFSCEEHAQNALKKHKDMLGK 396
Query: 211 RLVTLVMSGA-------QWFLSPPLTNETPISRLDLTGSPV 244
R + L S A + S PL P L + P
Sbjct: 397 RYIELFKSTAAEVQQVLNKYSSAPLIPVAPSPILSVVAPPT 437
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F GL I G + + GR G A ++F +E+ + A
Sbjct: 223 DNTVIRARGLPWQSSDQDIARFFRGLNIAKGGAALCLNAQGRRNGEALVRFESEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGGRYIEVYKATGEDFL 306
>gi|402580830|gb|EJW74779.1| hypothetical protein WUBG_14313, partial [Wuchereria bancrofti]
Length = 292
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 61/101 (60%), Gaps = 4/101 (3%)
Query: 122 SEMDWALKRQGAVLSGSAV---DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHD 178
S+ D + +R G L+ + + +RL GLPY C KE++ +F E LEI GI + +D
Sbjct: 3 SDYDDSDRRYGGSLADPNLPGRETSIVRLGGLPYGCTKEEIVRFFEPLEIADRGIVMTYD 62
Query: 179 -YAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
Y+G+ G A++ F+D E+A KAL ++KE I HR V + S
Sbjct: 63 RYSGKPKGEAFVAFIDDESASKALAKNKEYIQHRYVDIYPS 103
>gi|351707744|gb|EHB10663.1| G-rich sequence factor 1 [Heterocephalus glaber]
Length = 455
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 88/216 (40%), Gaps = 72/216 (33%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 124 IHFLLNRDGKRRGDALIEMESERDVQKALEKHRLYMGQRYVEVY--------EINNEDVD 175
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V + V+ +RL+GLP
Sbjct: 176 -----------------------------------ALMKSLQVKASPLVNDGVVRLRGLP 200
Query: 152 YECKKEDVEKFLEG-----------------------LEIVPNG-----ITIPHDYAGR- 182
Y C ++D+ F G L VP G IT DY GR
Sbjct: 201 YSCSEKDIVDFFAGAQQFDHIWGITSPMSSFLIVLLYLRSVPTGLNIVDITFVMDYRGRR 260
Query: 183 CTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
TG AY+QF + E A +AL++H+E+IG+R + + S
Sbjct: 261 KTGEAYVQFEEPEMASQALMKHREEIGNRYIEIFPS 296
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 23/208 (11%)
Query: 30 VNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGR 88
V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++ + G
Sbjct: 248 VDITFVMDYRGRRKTGEAYVQFEEPEMASQALMKHREEIGNRYIEIFPSRRNEVRTHVGS 307
Query: 89 GTGGFGGVKSTPYGVGIFCISQ----FLAKWMRRAKR------SEMDWALKRQGAVLSGS 138
G V S+P CI++ F + R +E + L ++
Sbjct: 308 HKGR--KVVSSPTAK---CITEPDVVFEEHEVNEDIRPMTTFENEKEIELPKEVLEKVPE 362
Query: 139 AVDQCCM------RLQGLPYECKKEDVEKFLEG-LEIVPNGITIPHDYAGRCTGVAYIQF 191
A D M ++GLP++ +D+ + + P IT+ + +G+ TG A++ F
Sbjct: 363 AADLGAMPSLHVVHMRGLPFQANAQDIINVCAFFMPLRPVRITMEYSSSGKATGEAHVHF 422
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSG 219
E+A A+L+ + + HR + L ++
Sbjct: 423 GSHEDAVAAMLKDRSHVHHRYIELFLNS 450
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 36/54 (66%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEA V F S +DA A+ + +S++ RYIEL++
Sbjct: 395 FFMPLRPVRITMEYSSSGKATGEAHVHFGSHEDAVAAMLKDRSHVHHRYIELFL 448
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 24/160 (15%)
Query: 137 GSAVDQC-CMRLQGLPYECKKEDVEKFLEGLEI--VPNGITIPHDYAGRCTGVAYIQFVD 193
G VD +R QGLP+ C EDV F + +I GI + G+ G A I+
Sbjct: 85 GEEVDDVFLIRAQGLPWSCTVEDVLNFFQDCKIRNSEKGIHFLLNRDGKRRGDALIEMES 144
Query: 194 KENAEKALLRHKEKIGHRLVTLVMSGAQWFLSPPLTNE---TPISRLDLTGSPVRSTICV 250
+ + +KAL +H+ +G R V + + NE + L + SP+ + V
Sbjct: 145 ERDVQKALEKHRLYMGQRYVEVY----------EINNEDVDALMKSLQVKASPLVNDGVV 194
Query: 251 LCHPLTPRSVRPRSV-------RQSEHEWWALARLGSFLI 283
L P S + + +Q +H W + + SFLI
Sbjct: 195 RLRGL-PYSCSEKDIVDFFAGAQQFDHIWGITSPMSSFLI 233
>gi|405977012|gb|EKC41485.1| Dual specificity mitogen-activated protein kinase kinase 5
[Crassostrea gigas]
Length = 672
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 10/93 (10%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
++L+GLP+ C K+D+ F G EI P+GI P TG AY++F KE AEKAL RH
Sbjct: 116 VKLKGLPFGCTKQDIATFFSGFEIAPHGIMKPVKRHASLTGEAYVKFASKEIAEKALTRH 175
Query: 205 KEKIGHRLVTLV----------MSGAQWFLSPP 227
E +G R + + MS ++ +SPP
Sbjct: 176 NEYMGSRYINVYPTDALEVDHKMSVPEFTMSPP 208
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
I P I+ +GEA V+F+S + A++AL RH MG RYI +Y
Sbjct: 139 IAPHGIMKPVKRHASLTGEAYVKFASKEIAEKALTRHNEYMGSRYINVY 187
>gi|351714130|gb|EHB17049.1| Epithelial splicing regulatory protein 2 [Heterocephalus glaber]
Length = 719
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 105/237 (44%), Gaps = 43/237 (18%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY--- 75
++FFK I + L + GR +GEA + F+ + ALQRHK +MG RYIE+Y
Sbjct: 309 ARFFKGLNIARGGVALCLNAQGRRNGEALIRFTDREQRDLALQRHKHHMGVRYIEVYKAT 368
Query: 76 ------MEEGTSSKEAN--GRGTGGFGGVKSTPYGVGIFCISQFLAK------------W 115
+ GTS + A R ++ P+ G + FL +
Sbjct: 369 GEEFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGPADVLSFLGPECPVTGGADGLLF 428
Query: 116 MRR-------------AKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKF 162
+R A AL+R +L+G+ D C+RL+GLPY ED+ F
Sbjct: 429 VRHPDGRPTGDAFALFACEELAQAALRRHKGMLAGTGRD--CVRLRGLPYTATIEDILSF 486
Query: 163 L--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKIGHRLVTLV 216
L +I P+G+ + + GR +G A+IQ E A A R HK+ + R V +V
Sbjct: 487 LGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKMMKERYVEVV 543
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +DV +F +GL I G+ + + GR G A I+F D+E + AL
Sbjct: 291 ETVVRARGLPWQSSDQDVARFFKGLNIARGGVALCLNAQGRRNGEALIRFTDREQRDLAL 350
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + F+
Sbjct: 351 QRHKHHMGVRYIEVYKATGEEFV 373
>gi|313244027|emb|CBY14897.1| unnamed protein product [Oikopleura dioica]
Length = 376
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 82/190 (43%), Gaps = 42/190 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I+ L D GR SGEA V D + A +HK N+G RY+E+Y +S+ E
Sbjct: 48 IICLGRD-GRPSGEALVGLYDSDSFELAKSKHKENLGRRYVEVYE---SSTAEY------ 97
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
M+ + SG + + ++++G+P
Sbjct: 98 --------------------------------MNCSYDNDDGDASGFSGYEFIVKMRGMP 125
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ D+ F +G I P GI I G G A +QF DKE+A++AL RHK+ +G R
Sbjct: 126 FSATDHDIRDFFDGCSISPGGIVICLGQNGSANGEALVQFDDKESADQALERHKKNMGQR 185
Query: 212 LVTLVMSGAQ 221
+ + S ++
Sbjct: 186 YIEVFKSSSR 195
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 29/209 (13%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEA- 85
I P I++ G ++GEA V+F + A +AL+RHK NMG RYIE++ + A
Sbjct: 142 ISPGGIVICLGQNGSANGEALVQFDDKESADQALERHKKNMGQRYIEVFKSSSRDLQLAQ 201
Query: 86 -----------------NGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWAL 128
N R GG +++PYG A D
Sbjct: 202 GRNGGAGGGGSGGGPMRNSRS----GGPRASPYGGPPAGRPAIGGYGGSSAGGPPAD--- 254
Query: 129 KRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAY 188
GA L + + + ++GLPY ++++ +F L + + I + R G A
Sbjct: 255 --PGAGLDENGQYKHIVHMRGLPYRATEQEISEFF--LPVNTLAVRIIFNRENRPAGEAD 310
Query: 189 IQFVDKENAEKALLRHKEKIGHRLVTLVM 217
+ F +A+ +L + ++ +G R V L +
Sbjct: 311 VAFYTHADAQASLSKDRQNLGSRYVELFL 339
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 37/56 (66%)
Query: 21 SQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
S+FF P+ + + ++ + R +GEADV F + DAQ +L + + N+G RY+EL++
Sbjct: 284 SEFFLPVNTLAVRIIFNRENRPAGEADVAFYTHADAQASLSKDRQNLGSRYVELFL 339
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 136 SGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+G A +RL+GLP+ K+++ +FLE + + I GR +G A + D +
Sbjct: 11 AGGASPAFAVRLRGLPWSATKQEICEFLEN-RPDESSVIICLGRDGRPSGEALVGLYDSD 69
Query: 196 NAEKALLRHKEKIGHRLVTLVMSGAQWFLSPPLTNE 231
+ E A +HKE +G R V + S +++ N+
Sbjct: 70 SFELAKSKHKENLGRRYVEVYESSTAEYMNCSYDND 105
>gi|299472433|emb|CBN77621.1| heterogeneous nuclear ribonucleoprotein, putative [Ectocarpus
siliculosus]
Length = 305
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 11/197 (5%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF+ +VP++++++T GR +GEA V ++ + Q AL R K +MG RYIE++ +
Sbjct: 108 RFFQGLVPLDVVMVTRADGRGAGEAIVVLPNLMEMQMALSRDKQHMGRRYIEIFQSKRMD 167
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
A G ++S Q A ++ V
Sbjct: 168 YYSAV------VGQLQSQNM-----GGMQRQGGGGMGHGSMGGGGAGGLGPDGMAMPVVH 216
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+R++GLP+ K+DV F +G+ + + I GR TG A++ F +E A+
Sbjct: 217 TGVIRMRGLPFSATKQDVLNFFQGMPVTEDTIQFVVRGDGRVTGEAFVSFSSPAESEAAM 276
Query: 202 LRHKEKIGHRLVTLVMS 218
R+ +G R V L S
Sbjct: 277 SRNGNHMGTRYVELFAS 293
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+RL+GLP+E +DV +F +GL VP + + GR G A + + + AL R
Sbjct: 91 CVRLRGLPFEATIDDVLRFFQGL--VPLDVVMVTRADGRGAGEAIVVLPNLMEMQMALSR 148
Query: 204 HKEKIGHRLVTLVMS 218
K+ +G R + + S
Sbjct: 149 DKQHMGRRYIEIFQS 163
>gi|118362902|ref|XP_001014867.1| hypothetical protein TTHERM_00051700 [Tetrahymena thermophila]
gi|89296443|gb|EAR94431.1| hypothetical protein TTHERM_00051700 [Tetrahymena thermophila
SB210]
Length = 967
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 30/187 (16%)
Query: 37 DDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGV 96
D+ GR SGE + + + +H NMG RYIE+++ E + A +
Sbjct: 391 DNDGRFSGECVIRTKDQNQLDKIKDKHMRNMGKRYIEVFVAEQSDFVRAQDSQI-----I 445
Query: 97 KSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKK 156
G ISQ S++D L + ++ +++GLPY
Sbjct: 446 DDQKVG-----ISQI---------NSQIDPNLLQSANIV----------KIRGLPYNATD 481
Query: 157 EDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLV 216
+D++KF + +IV NGI +D R +G A+I F K++A+KA+ + KEK+G R + +
Sbjct: 482 QDIQKFFKDSQIVQNGIQKVYD-GKRPSGEAFIIFATKQDAQKAIEKDKEKMGSRYIEIF 540
Query: 217 MSGAQWF 223
+S + F
Sbjct: 541 LSHLKEF 547
Score = 46.2 bits (108), Expect = 0.020, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 136 SGSAVDQC-CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDK 194
SGS D +RL+GLP+ ++ ++++FL G+ + + IT HD GR +G I+ D+
Sbjct: 349 SGSRSDSYHYLRLRGLPFNAREAEIQQFL-GISLEQDQITFKHDNDGRFSGECVIRTKDQ 407
Query: 195 ENAEKALLRHKEKIGHRLVTLVMS 218
+K +H +G R + + ++
Sbjct: 408 NQLDKIKDKHMRNMGKRYIEVFVA 431
Score = 38.1 bits (87), Expect = 4.4, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
++L+G+PY K+ +V+ FL GL + + +D + TG +I+ D++ +K H
Sbjct: 167 LKLRGIPYNAKESEVQDFL-GLTLDKYQMVFKYDKNEKFTGECFIKAKDQDQFDKIKSMH 225
Query: 205 KEKIGHRLVTLVMS 218
K+ + +R + + ++
Sbjct: 226 KKTMKNRYIEIFVA 239
>gi|440793766|gb|ELR14941.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 622
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 90/194 (46%), Gaps = 43/194 (22%)
Query: 31 NILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGT 90
+ILL +GR +GE F + + +AL + K MG RYIE++ + ++A
Sbjct: 42 SILLALSPSGRPTGEGYAHFDNEETFVKALAKDKERMGQRYIEVFACPQSDMEKA----- 96
Query: 91 GGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD--QCC--MR 146
Q LA+ + +GA + + D QC +R
Sbjct: 97 -------------------QMLARGVT-------------EGASAAATNEDDLQCAAVVR 124
Query: 147 LQGLPYECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
++GLP+ + ++ F E G+ ++ G+ I + GR TG AY+QF E+A +AL RH
Sbjct: 125 MRGLPFRATEGEIVAFFEQAGVRVLDGGVLICKNPDGRVTGEAYVQFGSDEDARRALERH 184
Query: 205 KEKIGHRLVTLVMS 218
++++G R + L S
Sbjct: 185 RDQMGSRYIELFRS 198
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+ + +RL+GLP++ ++D++ F +GL P+G I + +GR TG Y F
Sbjct: 3 STSEFVVRLRGLPWQATEDDIKNFFQGLTFAPDGKDGLPSILLALSPSGRPTGEGYAHFD 62
Query: 193 DKENAEKALLRHKEKIGHRLVTL 215
++E KAL + KE++G R + +
Sbjct: 63 NEETFVKALAKDKERMGQRYIEV 85
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 33/55 (60%)
Query: 21 SQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
+ +F P+ + ++ +GR SG+A EF + + A+ +++ +MG RY+E++
Sbjct: 279 ANWFAPMPARRVHIILTGSGRPSGDAFAEFDNEAQWEHAMSKNRQHMGSRYVEIF 333
>gi|170035383|ref|XP_001845549.1| G-rich sequence factor-1 [Culex quinquefasciatus]
gi|167877365|gb|EDS40748.1| G-rich sequence factor-1 [Culex quinquefasciatus]
Length = 508
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 81/180 (45%), Gaps = 48/180 (26%)
Query: 41 RSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKSTP 100
R +GEA + ++DD +AL +K+ +G RYIE++ ++A G G G
Sbjct: 55 RQTGEAYLRLPTLDDQIKALDLNKATIGHRYIEVFTANEDQYEQAVNDGEGDEDG----- 109
Query: 101 YGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVE 160
G VL +L+GLP+ C KED++
Sbjct: 110 -------------------------------GPVL----------KLRGLPWSCTKEDIK 128
Query: 161 KFLEGLEIVP--NGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+F GL I NGI + D GR +G A ++F + +AE+A+ + KEKIG R + L S
Sbjct: 129 RFFVGLTIKNGINGILLLTDQLGRASGEAIVEFATEADAEQAMNKQKEKIGSRYIELFRS 188
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
FF P+ PV + D GR SGE + F +V++A +A+++HK MG RYIEL+
Sbjct: 443 FFMPLRPVKANIEYDSRGRPSGEGNAYFETVEEAMKAMKKHKEKMGSRYIELF 495
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D C+ L+G+P+ C +D++ F + + P I +D GR +G F E A KA
Sbjct: 422 DLFCVHLRGMPFSCDDQDIQDFF--MPLRPVKANIEYDSRGRPSGEGNAYFETVEEAMKA 479
Query: 201 LLRHKEKIGHRLVTL 215
+ +HKEK+G R + L
Sbjct: 480 MKKHKEKMGSRYIEL 494
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
ILLLTD GR+SGEA VEF++ DA++A+ + K +G RYIEL+ K A R
Sbjct: 143 ILLLTDQLGRASGEAIVEFATEADAEQAMNKQKEKIGSRYIELFRSSTREMKWAEKRAR- 201
Query: 92 GFGGVKSTPYG 102
+ PYG
Sbjct: 202 -----RPAPYG 207
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RL+GLP+ ++D+ FL+G+++ I I + R TG AY++ ++ KAL +
Sbjct: 19 IRLRGLPWNITEQDIRDFLQGVQVEHVHIGI-NAMTKRQTGEAYLRLPTLDDQIKALDLN 77
Query: 205 KEKIGHRLVTLVMSGAQWF 223
K IGHR + + + +
Sbjct: 78 KATIGHRYIEVFTANEDQY 96
>gi|313227785|emb|CBY22933.1| unnamed protein product [Oikopleura dioica]
Length = 559
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 83/192 (43%), Gaps = 33/192 (17%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L+ G+ +G+A V +S DDA +AL RHK+N+ DRY+E++ G + R
Sbjct: 266 IFLIKTAEGKPTGDAFVLLASEDDAVQALGRHKANLRDRYVEVFRSTGAELHQVLTRAMA 325
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+ G+ Q++ +R C+RL+G+P
Sbjct: 326 APIIPPGSHTGLPFMMAQQYIPSSVRN-------------------------CVRLRGMP 360
Query: 152 YECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR------ 203
Y ED+ FL I+P G+ + + GR +G A+IQ E A + L
Sbjct: 361 YSATLEDIMNFLGESSQFILPAGVHMVLNQQGRPSGDAFIQLQAHEFASRVALDVNKGGC 420
Query: 204 HKEKIGHRLVTL 215
HK+ +G R V +
Sbjct: 421 HKKHMGERYVEV 432
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 42/189 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ L+ + GR SGEA + F + + ALQRH+ +MG+RYIE++ + N GT
Sbjct: 163 VSLVLNQNGRRSGEALIRFENSEHRNLALQRHRQHMGNRYIEVFKAPSIDFIQMNA-GT- 220
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+ + +FL QG+V R++GLP
Sbjct: 221 -------------LPQVERFLG-----------------QGSV--------AIARMRGLP 242
Query: 152 YECKKEDVEKFLEGLEIVP--NGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIG 209
+ KED+ +FL + IV +GI + G+ TG A++ +++A +AL RHK +
Sbjct: 243 FSASKEDILQFLCEIHIVNGRDGIFLIKTAEGKPTGDAFVLLASEDDAVQALGRHKANLR 302
Query: 210 HRLVTLVMS 218
R V + S
Sbjct: 303 DRYVEVFRS 311
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 51/84 (60%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C+R++G+P++C D+ KF GL I G+++ + GR +G A I+F + E+ A
Sbjct: 131 EDTCVRVRGIPWQCSDHDLAKFFRGLNIPSGGVSLVLNQNGRRSGEALIRFENSEHRNLA 190
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RH++ +G+R + + + + F+
Sbjct: 191 LQRHRQHMGNRYIEVFKAPSIDFI 214
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 12/106 (11%)
Query: 1 MRFSFYVIDILIHITYCLLCSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRAL 60
M +S + DI+ + SQF I+P + ++ + GR SG+A ++ + + A R
Sbjct: 359 MPYSATLEDIM---NFLGESSQF---ILPAGVHMVLNQQGRPSGDAFIQLQAHEFASRVA 412
Query: 61 QR------HKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKSTP 100
HK +MG+RY+E++ G GT GV++ P
Sbjct: 413 LDVNKGGCHKKHMGERYVEVFQCSGDEMNLVLMGGTLNRNGVQAPP 458
>gi|158301007|ref|XP_320791.4| AGAP011722-PA [Anopheles gambiae str. PEST]
gi|157013433|gb|EAA00060.4| AGAP011722-PA [Anopheles gambiae str. PEST]
Length = 861
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 102/248 (41%), Gaps = 57/248 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ L GR +GEA V F S + AL+RHK ++G+RYIE+Y ANG
Sbjct: 235 VALCLSPQGRRNGEALVRFVSQEHRDMALKRHKHHIGNRYIEVY--------RANGE--- 283
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
FLA + ++ A LS A Q +R++GLP
Sbjct: 284 ------------------DFLAVAGGASNEAQ---------AFLSKGA--QVIIRMRGLP 314
Query: 152 YECKKEDVEKFLEGLEIVPN------GITIPHDYAGRCTGVAYIQFVDKENAEKALLRHK 205
Y+C + V F E N GI GR TG A++ F +A KAL +H+
Sbjct: 315 YDCTAKQVLDFFANGENSCNVLDGADGILFVKKPDGRATGDAFVLFEQDSDASKALSKHR 374
Query: 206 EKIGHRLVTLVMSGA---QWFLSPPLT--------NETPISRLDLTGSPVRSTICVLCHP 254
E IG R + L S Q + ++ +P +RL L + V+ VL
Sbjct: 375 ESIGQRYIELFRSTTAEVQQVCTSLVSVCRVFAQQKNSPTNRLTLLINVVKHPPQVLNRS 434
Query: 255 LTPRSVRP 262
+ P++ P
Sbjct: 435 MDPKTYEP 442
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 35/204 (17%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL + GR++G+A V F DA +AL +H+ ++G RYIEL+ +++ E T
Sbjct: 342 ILFVKKPDGRATGDAFVLFEQDSDASKALSKHRESIGQRYIELFR---STTAEVQQVCTS 398
Query: 92 ------GFGGVKSTPYGVGIFCIS------QFLAKWMRR-----------AKRSEMDWAL 128
F K++P I+ Q L + M A+ +M L
Sbjct: 399 LVSVCRVFAQQKNSPTNRLTLLINVVKHPPQVLNRSMDPKTYEPPQPPLIAQLPQMQ--L 456
Query: 129 KRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGV 186
Q + SG V++ C+RL+GLPYE K E + FL+ I+ G+ + ++ G+ G
Sbjct: 457 LPQHVITSG--VEKNCIRLRGLPYEAKVEHILHFLDDFANHIIYQGVHLVYNAQGQFNGE 514
Query: 187 AYIQFVDKENA--EKALLRHKEKI 208
A+IQ +D E A + A +H + +
Sbjct: 515 AFIQ-MDSETAAYQSAQQKHHKNM 537
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
C +R +GLP++ +D+ KF GL + G+ + GR G A ++FV +E+ + AL
Sbjct: 205 CIVRARGLPWQSSDQDIAKFFRGLNVAKGGVALCLSPQGRRNGEALVRFVSQEHRDMALK 264
Query: 203 RHKEKIGHRLVTLVMSGAQWFLS 225
RHK IG+R + + + + FL+
Sbjct: 265 RHKHHIGNRYIEVYRANGEDFLA 287
>gi|115484017|ref|NP_001065670.1| Os11g0133600 [Oryza sativa Japonica Group]
gi|77548595|gb|ABA91392.1| heterogeneous nuclear ribonucleoprotein, putative, expressed [Oryza
sativa Japonica Group]
gi|113644374|dbj|BAF27515.1| Os11g0133600 [Oryza sativa Japonica Group]
gi|215764972|dbj|BAG86669.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222615462|gb|EEE51594.1| hypothetical protein OsJ_32846 [Oryza sativa Japonica Group]
Length = 298
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 90/199 (45%), Gaps = 27/199 (13%)
Query: 24 FKPIVPVNIL--LLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY--MEEG 79
FK V ++I+ LL GR +GEA V F S A+ AL R++ NMG RY+E++ ++
Sbjct: 109 FKFFVGLDIVDCLLVHKNGRFTGEAFVVFPSAMQAEFALHRNRQNMGRRYVEVFRCKKQE 168
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA 139
S A GGF S++ R K+ D + VL
Sbjct: 169 YYSAIAAEVNQGGF-------------FDSEYRHSPPPRPKKPAEDKSSMEYTEVL---- 211
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
+L+GLPY ED+ KF E+ + I + G+ TG A+++F E A+
Sbjct: 212 ------KLRGLPYSATTEDIIKFFVEYELTEENVHIAYRPDGKATGEAFVEFPTAEVAKT 265
Query: 200 ALLRHKEKIGHRLVTLVMS 218
A+ + K IG R V L S
Sbjct: 266 AMCKDKMTIGTRYVELFPS 284
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 132 GAVLSGSAVDQCC-----MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGV 186
GA L G+ + +RL+GLP++C D+ KF GL+IV + H GR TG
Sbjct: 76 GANLPGAGANSAIQNFPGVRLRGLPFDCDDLDIFKFFVGLDIV--DCLLVHK-NGRFTGE 132
Query: 187 AYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGAQWFLS 225
A++ F AE AL R+++ +G R V + Q + S
Sbjct: 133 AFVVFPSAMQAEFALHRNRQNMGRRYVEVFRCKKQEYYS 171
>gi|357517683|ref|XP_003629130.1| Heterogeneous nuclear ribonucleoprotein F [Medicago truncatula]
gi|355523152|gb|AET03606.1| Heterogeneous nuclear ribonucleoprotein F [Medicago truncatula]
Length = 290
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 22/197 (11%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF + V++LL+ + +GR SGEA V F+ + ALQR + NMG RY+E++ +
Sbjct: 102 KFFAGLTIVDVLLV-NKSGRFSGEAFVVFAGAMQVEFALQRDRQNMGRRYVEVFRCKKQD 160
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
A G + G+ Y S ++ R + + +MD+
Sbjct: 161 YYNAVA-GEINYEGIYDNDYQG-----SPPPSRSKRFSDKEQMDYTE------------- 201
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
++++GLP+ K + F + +++ + I G+ TG AY++FV + A++A+
Sbjct: 202 --ILKMRGLPFLVTKSQIIDFFKDYKLIEGRVHIACRPDGKATGEAYVEFVSPDEAKRAM 259
Query: 202 LRHKEKIGHRLVTLVMS 218
+ K IG R V L S
Sbjct: 260 FKDKMTIGSRYVELFPS 276
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 16/154 (10%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP+ C D+ KF GL IV + + +GR +G A++ F E AL R
Sbjct: 85 VVRLRGLPFNCTDIDILKFFAGLTIVD---VLLVNKSGRFSGEAFVVFAGAMQVEFALQR 141
Query: 204 HKEKIGHRLVTLVMSGAQWFLSPPL--TNETPISRLDLTGSPVRSTICVLCHPLTPRSVR 261
++ +G R V + Q + + N I D GSP S RS R
Sbjct: 142 DRQNMGRRYVEVFRCKKQDYYNAVAGEINYEGIYDNDYQGSPPPS-----------RSKR 190
Query: 262 PRSVRQSEHEWWALARLGSFLISRTHQIIIPRSY 295
Q ++ R FL++++ I + Y
Sbjct: 191 FSDKEQMDYTEILKMRGLPFLVTKSQIIDFFKDY 224
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGR 88
G+++GEA VEF S D+A+RA+ + K +G RY+EL+ ++ A R
Sbjct: 239 GKATGEAYVEFVSPDEAKRAMFKDKMTIGSRYVELFPSTPDEARRAESR 287
>gi|348520489|ref|XP_003447760.1| PREDICTED: hypothetical protein LOC100697955 [Oreochromis
niloticus]
Length = 1432
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 93/194 (47%), Gaps = 8/194 (4%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF+ + + L+ D GR +G A V+F S D+ A++R MG R+IE+ S
Sbjct: 323 EFFRGLGVDAVRLMRDGQGRPTGRAMVKFFSPQDSFEAVKRGGGMMGQRFIEITP---GS 379
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
++ G G SQ L + +R ++ + Q A
Sbjct: 380 ERQWASLNDGLAGHAPHNSSKSNSINESQDL-----QHRRGNVEAGGRDQRARSRSPHRQ 434
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ C+ L+GLPYE K+ +++F + L+IV + I I + GR TG +++F +++ + AL
Sbjct: 435 EFCVYLKGLPYEADKKQIKEFFKNLDIVEDSIYIAYGPNGRATGEGFLEFKSEQDYKGAL 494
Query: 202 LRHKEKIGHRLVTL 215
H + +G R + +
Sbjct: 495 GAHMQYMGSRFIQV 508
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 79/197 (40%), Gaps = 45/197 (22%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
+FFK IV +I + GR++GE +EF S D + AL H MG R+I+++
Sbjct: 454 EFFKNLDIVEDSIYIAYGPNGRATGEGFLEFKSEQDYKGALGAHMQYMGSRFIQVH---- 509
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA 139
R+ ++D KR+ A G
Sbjct: 510 ----------------------------------PISRKGMLEKIDAIRKREAAQGDGKN 535
Query: 140 VD-----QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDK 194
D + C + +PY K+DV FLEG+ I + + + D G G A Q +
Sbjct: 536 QDGLKTPRNCAHITNIPYNISKKDVRAFLEGVGIYEDTLKVLTDSHGNGLGQAIFQLRTE 595
Query: 195 ENAEKALLRHKEKIGHR 211
E+A KA H++K+ R
Sbjct: 596 EDARKAERLHRQKLNGR 612
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D+ + LQ LP+ C + +V +F GL + + + + D GR TG A ++F +++ +A
Sbjct: 303 DELFVLLQNLPFSCSEVEVREFFRGLGV--DAVRLMRDGQGRPTGRAMVKFFSPQDSFEA 360
Query: 201 LLRHKEKIGHRLVTLVM-SGAQW 222
+ R +G R + + S QW
Sbjct: 361 VKRGGGMMGQRFIEITPGSERQW 383
>gi|82621148|gb|ABB86262.1| unknown [Solanum tuberosum]
Length = 364
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 82/182 (45%), Gaps = 37/182 (20%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR +GEA VEF+S DD++ A+ + + +G+RYIEL+ +EA RG
Sbjct: 210 GRPTGEAFVEFASADDSRAAMAKDRMTIGNRYIELFASSSEELEEAVSRG---------- 259
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
+ L K + +E+ +R++GLP+ K+D+
Sbjct: 260 ----------RVLEKPVDGRDPNEV-----------------TSILRMRGLPFSAGKDDI 292
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
F + + + I + GR TG A+++F ++A+ AL + + +G R V L S
Sbjct: 293 MDFFKDFALTEDAIHVTFLSDGRPTGEAFVEFASTDDAKAALAKDRMTLGSRYVELFPSS 352
Query: 220 AQ 221
+
Sbjct: 353 IE 354
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 79/189 (41%), Gaps = 28/189 (14%)
Query: 33 LLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGG 92
+LL GR +GEA ALQR++ N+G RY+E++ +
Sbjct: 90 VLLVHKGGRFTGEAYCVLGYPLQVDFALQRNRQNIGRRYVEVFRSK-------------- 135
Query: 93 FGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPY 152
K Y + + RA+ ++ L VL L+GLP+
Sbjct: 136 ----KEEYYKAIANEVYDSRGGSVPRARSADESKTLPEHTGVLW----------LRGLPF 181
Query: 153 ECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRL 212
KED+ F + E+ I I + GR TG A+++F +++ A+ + + IG+R
Sbjct: 182 SASKEDIIDFFKDFELPEKSIHITATFEGRPTGEAFVEFASADDSRAAMAKDRMTIGNRY 241
Query: 213 VTLVMSGAQ 221
+ L S ++
Sbjct: 242 IELFASSSE 250
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP++C + ++ FL GL++V + + H GR TG AY + AL R
Sbjct: 63 VVRLRGLPFDCSETEIADFLHGLDVV--DVLLVHK-GGRFTGEAYCVLGYPLQVDFALQR 119
Query: 204 HKEKIGHRLVTLVMSGAQWFLSPPLTNETPISR 236
+++ IG R V + S + + + NE SR
Sbjct: 120 NRQNIGRRYVEVFRSKKEEYYK-AIANEVYDSR 151
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 22 QFFKPIV----PVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FFK +++ L+D GR +GEA VEF+S DDA+ AL + + +G RY+EL+
Sbjct: 294 DFFKDFALTEDAIHVTFLSD--GRPTGEAFVEFASTDDAKAALAKDRMTLGSRYVELFPS 351
Query: 78 EGTSSKEANGRG 89
A RG
Sbjct: 352 SIEDMNHAISRG 363
>gi|291232399|ref|XP_002736133.1| PREDICTED: fusilli-like [Saccoglossus kowalevskii]
Length = 636
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 41/206 (19%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF PV+ +L + GRS+G+A V FS+ +A AL +HK N+G RYIEL+
Sbjct: 341 FFGDECPVSGAEEGVLFVRYPDGRSTGDAFVLFSTEANATSALAKHKENLGSRYIELF-- 398
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMR-----RAKRSEMDWALKRQG 132
T+++ + Q L+++ + + Q
Sbjct: 399 RSTTAE------------------------VQQVLSRYQQHPLIPNGPPPTGSVPILPQQ 434
Query: 133 AVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLE--IVPNGITIPHDYAGRCTGVAYIQ 190
+ SGS D C+R++GLP+ ED+ KFL I P+G+ + + GR +G A+IQ
Sbjct: 435 MITSGSVRD--CIRMRGLPFSASVEDIMKFLGEFAHYIRPHGVHMVLNQQGRPSGDAFIQ 492
Query: 191 FVDKENAEKALLR-HKEKIGHRLVTL 215
+ E A A + H++ +G R + +
Sbjct: 493 MISAEKALHAAQQCHRKHMGERYIEV 518
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 100/251 (39%), Gaps = 65/251 (25%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I + L + GR +GEA V F+ + ALQRHK ++G RYIE+Y
Sbjct: 237 AKFFKGLDIGKGGVALCLNPQGRRNGEALVRFTCTEHRDLALQRHKHHLGHRYIEVYKAT 296
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G +FL K + ++ K G ++
Sbjct: 297 G-----------------------------EEFL-KIAAGSSSEASNFLAKDNGHII--- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKF------LEGLEIVPNGITIPHDYAGRCTGVAYIQFV 192
+R++GLP+ +DV F + G E G+ GR TG A++ F
Sbjct: 324 ------VRMRGLPFTATAKDVLVFFGDECPVSGAE---EGVLFVRYPDGRSTGDAFVLFS 374
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA---QWFLS-----------PPLTNETPI-SRL 237
+ NA AL +HKE +G R + L S Q LS PP T PI +
Sbjct: 375 TEANATSALAKHKENLGSRYIELFRSTTAEVQQVLSRYQQHPLIPNGPPPTGSVPILPQQ 434
Query: 238 DLTGSPVRSTI 248
+T VR I
Sbjct: 435 MITSGSVRDCI 445
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
++ +GLP++ +DV KF +GL+I G+ + + GR G A ++F E+ + AL RH
Sbjct: 222 IKARGLPWQSSDKDVAKFFKGLDIGKGGVALCLNPQGRRNGEALVRFTCTEHRDLALQRH 281
Query: 205 KEKIGHRLVTLVMSGAQWFL 224
K +GHR + + + + FL
Sbjct: 282 KHHLGHRYIEVYKATGEEFL 301
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 8/104 (7%)
Query: 1 MRFSFYVIDILIHITYCLLCSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRAL 60
+ FS V DI+ +F I P + ++ + GR SG+A ++ S + A A
Sbjct: 450 LPFSASVEDIM------KFLGEFAHYIRPHGVHMVLNQQGRPSGDAFIQMISAEKALHAA 503
Query: 61 QR-HKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKSTPYGV 103
Q+ H+ +MG+RYIE++ G GT GG+ S P G
Sbjct: 504 QQCHRKHMGERYIEVFQCSGDEMNFVLMGGTLNRGGL-SPPAGA 546
>gi|255561415|ref|XP_002521718.1| heterogeneous nuclear ribonucleoprotein, putative [Ricinus
communis]
gi|223539109|gb|EEF40705.1| heterogeneous nuclear ribonucleoprotein, putative [Ricinus
communis]
Length = 264
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 96/197 (48%), Gaps = 22/197 (11%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF + V++LL+ + GR +GEA V F+ + ALQR + NMG RY+E++ +
Sbjct: 76 KFFAGLDIVDVLLVNKN-GRFTGEAFVVFAGAMQVEFALQRDRQNMGRRYVEVFRCKRQD 134
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
A + G+ T Y S +K R + + ++++
Sbjct: 135 YYNAVAAEVN-YEGIYDTDY-----HGSPPPSKAKRFSDKDQLEYTE------------- 175
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
++++GLP+ KK ++ +F + E+V + I I G+ TG AY++F + A++A+
Sbjct: 176 --ILKMRGLPFSAKKPEIIEFFKEFELVEDRIHIACRPDGKATGEAYVEFASADEAKRAM 233
Query: 202 LRHKEKIGHRLVTLVMS 218
+ K IG R V L S
Sbjct: 234 SKDKMTIGSRYVELFPS 250
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP+ C D+ KF GL+IV + + GR TG A++ F E AL R
Sbjct: 59 VVRLRGLPFNCTDIDIFKFFAGLDIVD---VLLVNKNGRFTGEAFVVFAGAMQVEFALQR 115
Query: 204 HKEKIGHRLVTLVMSGAQWFLS--PPLTNETPISRLDLTGSP 243
++ +G R V + Q + + N I D GSP
Sbjct: 116 DRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDTDYHGSP 157
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 22 QFFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
+FFK +V I + G+++GEA VEF+S D+A+RA+ + K +G RY+EL+
Sbjct: 193 EFFKEFELVEDRIHIACRPDGKATGEAYVEFASADEAKRAMSKDKMTIGSRYVELFPSTP 252
Query: 80 TSSKEANGR 88
++ A R
Sbjct: 253 DEARRAESR 261
>gi|268565477|ref|XP_002639457.1| C. briggsae CBR-HRPF-1 protein [Caenorhabditis briggsae]
Length = 556
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 82/186 (44%), Gaps = 27/186 (14%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR+SG+A V F++ DD ++AL++ + ++G RYIE++ + + +
Sbjct: 40 GRTSGDATVTFTNEDDYRQALKKDREHLGSRYIEVFPMDEPPRRRGD------------- 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
+ R D R +G + D +RL+GLP+ D+
Sbjct: 87 ------------RNDFRPRGGGPPRDRFSDRGSGQRTGPSTD-PIVRLRGLPFSVTIRDI 133
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
FL L IV +GI +P R G AY+ F E+ + A RH + IGHR + V
Sbjct: 134 NDFLAPLPIVRDGILLPDQQRARIAGEAYVVFDSLESVQIAKQRHMKNIGHRYIE-VFEA 192
Query: 220 AQWFLS 225
Q LS
Sbjct: 193 TQRELS 198
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 22 QFFKPIVPVNILLLTDDA-GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
+FF PI P + L+ D R SG+A V F S D AL + K MG+RYIE+ + G
Sbjct: 496 EFFHPIRPNQVELIRDSQYQRPSGDARVIFYSRKDYDDALMKDKQYMGERYIEMIPDNG 554
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 30/50 (60%)
Query: 26 PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
PIV ILL R +GEA V F S++ Q A QRH N+G RYIE++
Sbjct: 141 PIVRDGILLPDQQRARIAGEAYVVFDSLESVQIAKQRHMKNIGHRYIEVF 190
>gi|321459051|gb|EFX70109.1| hypothetical protein DAPPUDRAFT_202511 [Daphnia pulex]
Length = 514
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 84/195 (43%), Gaps = 48/195 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ L GR +GEA V F S + AL+RHK ++G RYIE+Y G + G
Sbjct: 204 VALCLSPQGRRNGEALVRFISPEHRDMALKRHKHHIGQRYIEVYKATGEDFIDVAG---- 259
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
GI +E L R G V+ +R++GLP
Sbjct: 260 ------------GI---------------NNEAQNFLSRSGQVI---------VRMRGLP 283
Query: 152 YECKKEDVEKFLE-GLEIV-------PNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
Y+C + V +F E G E V +G+ + GR TG A++ F +E KAL +
Sbjct: 284 YDCTAKQVVEFFESGGEDVGSTVLDGDSGVLFVKKHDGRATGDAFVMFATEEEGSKALAK 343
Query: 204 HKEKIGHRLVTLVMS 218
H++ IG R + L S
Sbjct: 344 HRDIIGSRYIELFRS 358
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 26/186 (13%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+L + GR++G+A V F++ ++ +AL +H+ +G RYIEL+ ++ R
Sbjct: 313 VLFVKKHDGRATGDAFVMFATEEEGSKALAKHRDIIGSRYIELFRSTTAEVQQVLNRS-- 370
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+ Y I Q L Q + SG+ D C+RL+GLP
Sbjct: 371 ----MDPRTYETQAPLIPQL------------PQMPLLPQNMITSGTRKD--CIRLRGLP 412
Query: 152 YECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIG 209
YE + E + +FL IV G+ + ++ G+ +G A+IQ ++E++ + ++
Sbjct: 413 YEAQVEHILEFLGEHAKSIVYQGVHMVYNAQGQPSGEAFIQM----DSEQSSFQAAQQRH 468
Query: 210 HRLVTL 215
HR +
Sbjct: 469 HRYMVF 474
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+R +GLP++ +D+ +F GL + G+ + GR G A ++F+ E+ + AL
Sbjct: 174 TVVRARGLPWQSSDQDIARFFRGLNVARGGVALCLSPQGRRNGEALVRFISPEHRDMALK 233
Query: 203 RHKEKIGHRLVTLVMSGAQWFLS 225
RHK IG R + + + + F+
Sbjct: 234 RHKHHIGQRYIEVYKATGEDFID 256
>gi|194756410|ref|XP_001960472.1| GF13378 [Drosophila ananassae]
gi|190621770|gb|EDV37294.1| GF13378 [Drosophila ananassae]
Length = 885
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 78/186 (41%), Gaps = 47/186 (25%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR +GEA + F S + AL+RHK ++G RYIE+Y G
Sbjct: 320 GRRNGEALIRFISQEHRDMALKRHKHHIGTRYIEVYRASG-------------------- 359
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
FLA + ++ A LS A Q +R++GLPY+C + V
Sbjct: 360 ---------EDFLAIAGGASNEAQ---------AFLSKGA--QVIIRMRGLPYDCTAKQV 399
Query: 160 EKFLEGLEIVP-------NGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRL 212
F + P G+ GR TG A++ F + +A KAL RH+E IG R
Sbjct: 400 LDFFTTGDTAPCHVLDGNEGVLFVKKPDGRATGDAFVLFAHESDAAKALGRHRESIGQRY 459
Query: 213 VTLVMS 218
+ L S
Sbjct: 460 IELFRS 465
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 24/182 (13%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+L + GR++G+A V F+ DA +AL RH+ ++G RYIEL+ ++ R
Sbjct: 420 VLFVKKPDGRATGDAFVLFAHESDAAKALGRHRESIGQRYIELFRSTTAEVQQVLNRSMD 479
Query: 92 G----FGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRL 147
GG S P + A+ M L Q + SG+ + C+RL
Sbjct: 480 PKNYESGGNHSQPPLI---------------AQLPTMQLPLLPQHLITSGTTRN--CIRL 522
Query: 148 QGLPYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHK 205
+GLPYE E + FL+G I+ G+ + + G+ +G A+IQ +D E++ + + K
Sbjct: 523 RGLPYEAMVEHILHFLDGFAKHIIYQGVHMVINAQGQPSGEAFIQ-MDSEDSARLCAQRK 581
Query: 206 EK 207
Sbjct: 582 HN 583
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
C +R +GLP++ +D+ KF GL + G+ + GR G A I+F+ +E+ + AL
Sbjct: 281 NCIVRARGLPWQSSDQDIAKFFRGLNVAKGGVALCLSPLGRRNGEALIRFISQEHRDMAL 340
Query: 202 LRHKEKIGHRLVTLVMSGAQWFLS 225
RHK IG R + + + + FL+
Sbjct: 341 KRHKHHIGTRYIEVYRASGEDFLA 364
>gi|431912397|gb|ELK14531.1| Epithelial splicing regulatory protein 2 [Pteropus alecto]
Length = 698
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 104/239 (43%), Gaps = 47/239 (19%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYM 76
++FFK I + L + GR +GEA + F VD QR ALQRHK +MG RYIE+Y
Sbjct: 288 ARFFKGLNIARGGVALCLNAQGRRNGEALIRF--VDSEQRDLALQRHKHHMGVRYIEVYK 345
Query: 77 EEGTSSKEANG-----------RGTGGFGGVKSTPYGVGIFCISQFLAK----------- 114
G + G R ++ P+ G + FL
Sbjct: 346 ATGEEFVKIAGGTSLEVARFLSREDQVILRLRGLPFSAGPADVLGFLGPECPVTGGADGL 405
Query: 115 -WMRR-------------AKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVE 160
++R A AL+R +L+G+ D C+RL+GLPY ED+
Sbjct: 406 LFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLAGTGRD--CVRLRGLPYTATIEDIL 463
Query: 161 KFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKIGHRLVTLV 216
FL +I P+G+ + + GR +G A+IQ E A A R HK+ + R V +V
Sbjct: 464 SFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERAIAAAQRCHKKVMKERYVEVV 522
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +DV +F +GL I G+ + + GR G A I+FVD E + AL
Sbjct: 270 ETVVRARGLPWQSSDQDVARFFKGLNIARGGVALCLNAQGRRNGEALIRFVDSEQRDLAL 329
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + F+
Sbjct: 330 QRHKHHMGVRYIEVYKATGEEFV 352
>gi|324510500|gb|ADY44391.1| RNA-binding protein sym-2, partial [Ascaris suum]
Length = 603
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 88/204 (43%), Gaps = 46/204 (22%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
+QFF I P + L GR +GEA V F + + AL+RH+ + +RYIE+Y
Sbjct: 188 AQFFVGLNIAPGGVALCLSAEGRRNGEALVRFEESEQRELALKRHRHFLHNRYIEVY--- 244
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
R TG FL + SE + R GA++
Sbjct: 245 ---------RATG-----------------EDFL--QVAAGSSSEAVRFVSRGGAMI--- 273
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFL----EGLEIVPNGITIPHDYAGRCTGVAYIQFVDK 194
+R++GLPY+C + + +F G ++ GI + GR TG A++ F D+
Sbjct: 274 ------VRMRGLPYDCTEAQIREFFASGDNGCTVMEGGILFVNKSDGRPTGDAFVMFDDE 327
Query: 195 ENAEKALLRHKEKIGHRLVTLVMS 218
+ AL +HK IG R + L S
Sbjct: 328 AAGQLALTKHKHTIGSRYIELFRS 351
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 66/162 (40%), Gaps = 42/162 (25%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL + GR +G+A V F Q AL +HK +G RYIEL+ ++ R
Sbjct: 306 ILFVNKSDGRPTGDAFVMFDDEAAGQLALTKHKHTIGSRYIELFRSTQAEVQQVVNR--- 362
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+L+ V+ G+ D C+RL+GLP
Sbjct: 363 -----------------------------------SLESVQVVVQGNRKD--CIRLRGLP 385
Query: 152 YECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQF 191
YE E++ +FL IV G+ + ++ G +G A+IQ
Sbjct: 386 YEAHVENIVEFLGDAARHIVFQGVHMVYNAQGHPSGEAFIQM 427
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 138 SAVDQCCM-RLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
S VD + R +GLP++ DV +F GL I P G+ + GR G A ++F + E
Sbjct: 165 SEVDSAVVVRARGLPWQATDHDVAQFFVGLNIAPGGVALCLSAEGRRNGEALVRFEESEQ 224
Query: 197 AEKALLRHKEKIGHRLVTLVMSGAQWFL 224
E AL RH+ + +R + + + + FL
Sbjct: 225 RELALKRHRHFLHNRYIEVYRATGEDFL 252
>gi|357143320|ref|XP_003572879.1| PREDICTED: G-rich sequence factor 1-like isoform 2 [Brachypodium
distachyon]
Length = 274
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 27/200 (13%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY--MEEG 79
+FF + V+ LL+ + GR SGEA V F S A+ AL R++ NMG RY+E++ ++
Sbjct: 85 KFFVGLDIVDCLLVHKN-GRFSGEAFVVFPSTMQAEFALHRNRQNMGRRYVEVFRCKKQE 143
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAK-RSEMDWALKRQGAVLSGS 138
S A+ GGF + + S + + A+ +S MD+
Sbjct: 144 YYSAVASEVNQGGFFDSE--------YRHSPPPPRPKKPAEDKSSMDYTE---------- 185
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAE 198
++L+GLPY ED+ KF E+ + + I + G+ TG A+++F E A+
Sbjct: 186 -----VLKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAK 240
Query: 199 KALLRHKEKIGHRLVTLVMS 218
A+ + K IG R V L S
Sbjct: 241 TAMCKDKMTIGTRYVELFPS 260
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RL+GLP++C+ D+ KF GL+IV + H GR +G A++ F AE AL R+
Sbjct: 69 VRLRGLPFDCEDLDIIKFFVGLDIV--DCLLVHK-NGRFSGEAFVVFPSTMQAEFALHRN 125
Query: 205 KEKIGHRLVTLVMSGAQWFLS 225
++ +G R V + Q + S
Sbjct: 126 RQNMGRRYVEVFRCKKQEYYS 146
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 31 NILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRG 89
N+ + G+++GEA VEF + + A+ A+ + K +G RY+EL+ + A RG
Sbjct: 214 NVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKDKMTIGTRYVELFPSTPEEASRAKSRG 272
>gi|348526958|ref|XP_003450986.1| PREDICTED: epithelial splicing regulatory protein 1 [Oreochromis
niloticus]
Length = 738
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 100/239 (41%), Gaps = 61/239 (25%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ L + GR +GEA V F S + + ALQRHK +MG+RYIE+Y G + G
Sbjct: 280 VALCLNAQGRRNGEALVRFVSEEHRELALQRHKHHMGNRYIEVYKATGDDFLKIAG---- 335
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
T + V +F L R+ DQ +R++GLP
Sbjct: 336 ------GTSHEVAMF---------------------LSRE---------DQIIVRMRGLP 359
Query: 152 YECKKEDVEKFL----EGLEIVP-----NGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+ E V F E E P +GI GR TG A++ F +E+A+ AL
Sbjct: 360 FTATHEQVLAFFSPEDELKETCPVSGGKDGILFVRYPDGRPTGDAFVLFACEEHAQCALR 419
Query: 203 RHKEKIGHRLVTLVMSGA-------QWFLSPPLTNETPISRLDLTGSPVRSTICVLCHP 254
+HKE +G R + L S A + S PL + P + PV T+ +L P
Sbjct: 420 KHKEILGKRYIELFKSTAAEVQQVLNRYSSTPLISVAPAPLM-----PVLPTMSLLPPP 473
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 80/177 (45%), Gaps = 26/177 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL + GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++ R
Sbjct: 390 ILFVRYPDGRPTGDAFVLFACEEHAQCALRKHKEILGKRYIELFKSTAAEVQQVLNR--- 446
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
STP IS A M + L G V + C+RL+GLP
Sbjct: 447 ----YSSTP------LISVAPAPLMPVLPTMSL---LPPPGGV-------RDCLRLRGLP 486
Query: 152 YECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HK 205
Y ED+ FL +I P+G+ + + GR +G +IQ E A +A R HK
Sbjct: 487 YTASIEDILTFLGEFTQDIRPHGVHMVLNQQGRPSGDCFIQMTSAERALQASQRLHK 543
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F GL I G+ + + GR G A ++FV +E+ E A
Sbjct: 248 DNTVIRARGLPWQSSDQDIARFFRGLNIAKGGVALCLNAQGRRNGEALVRFVSEEHRELA 307
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G+R + + + FL
Sbjct: 308 LQRHKHHMGNRYIEVYKATGDDFL 331
>gi|157129243|ref|XP_001655329.1| hypothetical protein AaeL_AAEL011420 [Aedes aegypti]
gi|108872264|gb|EAT36489.1| AAEL011420-PA [Aedes aegypti]
Length = 894
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 86/197 (43%), Gaps = 54/197 (27%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ L GR +GEA V F S + AL+RHK ++G+RYIE+Y R TG
Sbjct: 296 VALCLSPQGRRNGEALVRFVSQEHRDMALKRHKHHIGNRYIEVY------------RATG 343
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
FLA + ++ A LS A Q +R++GLP
Sbjct: 344 -----------------EDFLAVAGGASNEAQ---------AFLSKGA--QVIIRMRGLP 375
Query: 152 YECKKEDVEKF----------LEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
Y+C + V +F L+G + GI GR TG A++ F + +A KAL
Sbjct: 376 YDCTAKQVLEFFANGDNNCTVLDGAD----GILFVKKPDGRATGDAFVLFSQETDAPKAL 431
Query: 202 LRHKEKIGHRLVTLVMS 218
+H+E IG R + L S
Sbjct: 432 SKHRESIGQRYIELFRS 448
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 22/181 (12%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL + GR++G+A V FS DA +AL +H+ ++G RYIEL+ ++ R
Sbjct: 403 ILFVKKPDGRATGDAFVLFSQETDAPKALSKHRESIGQRYIELFRSTTAEVQQVLNRSMD 462
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
P + A + L Q + SG+ ++ C+RL+GLP
Sbjct: 463 PKTYEPPQPPLI---------------AALPPVQLPLLPQHVITSGT--EKNCIRLRGLP 505
Query: 152 YECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENA--EKALLRHKEK 207
YE K E + FLE IV G+ + ++ G+ G A+IQ +D E A + A +H +
Sbjct: 506 YEAKVEHILHFLEDFAKNIVYQGVHLVYNAQGQFNGEAFIQ-MDSETAAYQSAQQKHHKN 564
Query: 208 I 208
+
Sbjct: 565 M 565
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
C +R +GLP++ +D+ +F GL + G+ + GR G A ++FV +E+ + AL
Sbjct: 266 CIVRARGLPWQSSDQDIARFFRGLNVAKGGVALCLSPQGRRNGEALVRFVSQEHRDMALK 325
Query: 203 RHKEKIGHRLVTLVMSGAQWFLS 225
RHK IG+R + + + + FL+
Sbjct: 326 RHKHHIGNRYIEVYRATGEDFLA 348
>gi|308498127|ref|XP_003111250.1| CRE-HRPF-1 protein [Caenorhabditis remanei]
gi|308240798|gb|EFO84750.1| CRE-HRPF-1 protein [Caenorhabditis remanei]
Length = 558
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 24/176 (13%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR+SG+A V FS+ DD + AL++ + ++G RYIE++ + + GG
Sbjct: 40 GRTSGDATVTFSNEDDYKLALKKDREHLGSRYIEVFPMNSAPRRRGDRDDFRPRGGGPPR 99
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
R + R E R G G+ +RL+GLP+ D+
Sbjct: 100 ----------------DRYSDRGEQ----HRSG----GTGGPDPIIRLRGLPFSVTARDI 135
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTL 215
FL+ L IV +GI +P R +G AYI F E+ + A RH + IGHR + +
Sbjct: 136 NDFLQPLGIVRDGILLPDQQRARPSGEAYIVFDMLESVQIAKQRHMKNIGHRYIEV 191
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 133 AVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFV 192
+ ++ S +R++G+P+ +EDV F I PN + + D R +G A + F
Sbjct: 471 STMAPSQSQHFVLRMRGVPFRATEEDVYDFFR--PIRPNKVELIRDNQFRASGDARVIFF 528
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGAQW 222
+++ ++AL++ K+ +G R + ++ ++
Sbjct: 529 SRKDYDEALMKDKQYMGERYIEMIPDNGRY 558
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
FF+PI P + L+ D+ R+SG+A V F S D AL + K MG+RYIE+ + G
Sbjct: 499 DFFRPIRPNKVELIRDNQFRASGDARVIFFSRKDYDEALMKDKQYMGERYIEMIPDNG 556
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 20 CSQFFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
+ F +P IV ILL R SGEA + F ++ Q A QRH N+G RYIE++
Sbjct: 135 INDFLQPLGIVRDGILLPDQQRARPSGEAYIVFDMLESVQIAKQRHMKNIGHRYIEVF 192
>gi|359476979|ref|XP_002280225.2| PREDICTED: epithelial splicing regulatory protein 2-like [Vitis
vinifera]
Length = 264
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 93/198 (46%), Gaps = 24/198 (12%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF + V++LL+ + +GR SGEA V F+ A ALQR + NMG RY+E++ +
Sbjct: 76 KFFAGLDIVDVLLV-NKSGRFSGEAYVVFAGSMQADFALQRDRQNMGRRYVEVFRCKKQD 134
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKR-SEMDWALKRQGAVLSGSAV 140
A V S GI+ + R+KR S+ D +
Sbjct: 135 YYHA----------VASEVNYEGIYDNDFHGSPPPSRSKRFSDKDQMEHTE--------- 175
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
++L+GLP+ KK + +F E+ + + I G+ TG AY++F E A+KA
Sbjct: 176 ---ILKLRGLPFSVKKSQILEFFGDFELGDDKVHIACRPDGKATGEAYVEFASAEEAKKA 232
Query: 201 LLRHKEKIGHRLVTLVMS 218
+ + K IG R V L S
Sbjct: 233 MGKDKMTIGSRYVELFPS 250
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP+ C D+ KF GL+IV + + +GR +G AY+ F A+ AL R
Sbjct: 59 VVRLRGLPFNCTDIDIFKFFAGLDIVD---VLLVNKSGRFSGEAYVVFAGSMQADFALQR 115
Query: 204 HKEKIGHRLVTLVMSGAQWFLSPPLT--NETPISRLDLTGSP 243
++ +G R V + Q + + N I D GSP
Sbjct: 116 DRQNMGRRYVEVFRCKKQDYYHAVASEVNYEGIYDNDFHGSP 157
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 33/49 (67%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGR 88
G+++GEA VEF+S ++A++A+ + K +G RY+EL+ ++ A R
Sbjct: 213 GKATGEAYVEFASAEEAKKAMGKDKMTIGSRYVELFPSTPDEARRAESR 261
>gi|170047639|ref|XP_001851321.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167870002|gb|EDS33385.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 677
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 81/193 (41%), Gaps = 46/193 (23%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ L GR +GEA V F S + AL+RHK ++ +RYIE+Y G
Sbjct: 75 VALCLSPQGRRNGEALVRFVSQEHRDMALKRHKHHISNRYIEVYRASG------------ 122
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
FLA + ++ A LS A Q +R++GLP
Sbjct: 123 -----------------EDFLAVAGGASNEAQ---------AFLSKGA--QVIIRMRGLP 154
Query: 152 YECKKEDVEKFLEGLEIV------PNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHK 205
Y+C + V +F E +GI GR TG A++ F + +A KAL +H+
Sbjct: 155 YDCTAKQVLEFFANGETSCTVLDGADGILFVKKPDGRATGDAFVLFAQESDASKALSKHR 214
Query: 206 EKIGHRLVTLVMS 218
E IG R + L S
Sbjct: 215 ESIGQRYIELFRS 227
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 22/181 (12%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL + GR++G+A V F+ DA +AL +H+ ++G RYIEL+ ++ R
Sbjct: 182 ILFVKKPDGRATGDAFVLFAQESDASKALSKHRESIGQRYIELFRSTTAEVQQVLNRSMD 241
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
P + A + L Q + SG+ ++ C+RL+GLP
Sbjct: 242 PKTYEPPQPPLI---------------AALPPVQMPLLPQHVITSGT--EKNCIRLRGLP 284
Query: 152 YECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENA--EKALLRHKEK 207
YE K E + FLE IV G+ + ++ G+ G A+IQ +D E A + A +H +
Sbjct: 285 YEAKVEHILHFLEDFAKHIVYQGVHLVYNAQGQFNGEAFIQ-MDSEVAAYQSAQQKHHKN 343
Query: 208 I 208
+
Sbjct: 344 M 344
>gi|256087258|ref|XP_002579790.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|350644185|emb|CCD61054.1| heterogeneous nuclear ribonucleoprotein-related [Schistosoma
mansoni]
Length = 1009
Score = 70.5 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 58/206 (28%), Positives = 87/206 (42%), Gaps = 49/206 (23%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
QFF I I L+ GR +GEA ++F+ + AL++HK ++G RYIE+Y G
Sbjct: 392 QFFSGINIAKGGISLVLSKIGRRNGEALIQFADAEQQSLALRKHKHHVGKRYIEVYAATG 451
Query: 80 T---SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
+ S + F G +TP
Sbjct: 452 SDFISIAGGESQEAMNFLGKLTTP------------------------------------ 475
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFL----EGLEIVPNGITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLPY E + +FL + ++ NGI + GR TG A++ F
Sbjct: 476 ----NQTLIRMRGLPYTTTPEQIVRFLCILIKIVQFNANGILFVNKPDGRATGDAFVIFE 531
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMS 218
K AEKAL +K+ IG R + L S
Sbjct: 532 TKIVAEKALENNKQHIGSRYIELFKS 557
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 69 DRYIELYMEEGTSSKEANGRGTGGFGGVKSTPYGVGIFCIS--QFLAKWMRRAKRSEMDW 126
D I ++E +S + + G+K P G + I + L K +++ M+W
Sbjct: 293 DHLISSTIQEPHTSNQDYQQFNSKLIGLKRQP---GYWPIQHCRILVKVIQKMTLDGMEW 349
Query: 127 A----LKRQ--GAVLSGSAV--DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHD 178
+ R+ A++S + D +R +GLP++ ++ +F G+ I GI++
Sbjct: 350 TEFETVNREYYPAIISKTDTINDNVVVRARGLPWQATDLEIFQFFSGINIAKGGISLVLS 409
Query: 179 YAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGAQWFLS 225
GR G A IQF D E AL +HK +G R + + + F+S
Sbjct: 410 KIGRRNGEALIQFADAEQQSLALRKHKHHVGKRYIEVYAATGSDFIS 456
>gi|189238842|ref|XP_970801.2| PREDICTED: similar to fusilli CG8205-PD [Tribolium castaneum]
Length = 683
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 81/197 (41%), Gaps = 54/197 (27%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ L GR +GEA ++F S + AL+RHK ++G RYIE+Y G G
Sbjct: 256 VALCLSAQGRRNGEALIKFESQEHRDMALKRHKHHIGPRYIEVYRASGEDFLSVAG---- 311
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
K SE L R AV+ +R++GLP
Sbjct: 312 ---------------------------GKSSEAQAFLSRGAAVI---------VRMRGLP 335
Query: 152 YECKKEDVEKF----------LEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
Y+C + V F L+G E G+ GR TG A++ F + +A KAL
Sbjct: 336 YDCTAKQVLDFFASGENSCTVLDGTE----GVLFVRKPDGRATGDAFVLFASESDAPKAL 391
Query: 202 LRHKEKIGHRLVTLVMS 218
+H+E IG R + L S
Sbjct: 392 SKHRECIGSRYIELFRS 408
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
C +R +GLP++ +D+ KF GL + G+ + GR G A I+F +E+ + AL
Sbjct: 225 NCVVRARGLPWQSSDQDIAKFFSGLNVAKGGVALCLSAQGRRNGEALIKFESQEHRDMAL 284
Query: 202 LRHKEKIGHRLVTLVMSGAQWFLS 225
RHK IG R + + + + FLS
Sbjct: 285 KRHKHHIGPRYIEVYRASGEDFLS 308
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 27/186 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+L + GR++G+A V F+S DA +AL +H+ +G RYIEL+ ++ R
Sbjct: 363 VLFVRKPDGRATGDAFVLFASESDAPKALSKHRECIGSRYIELFRSTTAEVQQVLNRS-- 420
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++ Y L Q + SG+ + C+RL+GLP
Sbjct: 421 ----LEARTY-------------EPEPLPPLLPHMPLLPQHYITSGTKKE--CIRLRGLP 461
Query: 152 YECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIG 209
YE + E + +FL I+ G+ + ++ G+ +G A+IQ ++E++ ++
Sbjct: 462 YEAQVEHILEFLGEYAKNIIFQGVHMVYNAQGQPSGEAFIQM----DSEQSACITAQQKH 517
Query: 210 HRLVTL 215
HR +T
Sbjct: 518 HRYMTF 523
>gi|147834707|emb|CAN70556.1| hypothetical protein VITISV_016468 [Vitis vinifera]
Length = 257
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 93/198 (46%), Gaps = 24/198 (12%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF + V++LL+ + +GR SGEA V F+ A ALQR + NMG RY+E++ +
Sbjct: 69 KFFAGLDIVDVLLV-NKSGRFSGEAYVVFAGSMQADFALQRDRQNMGRRYVEVFRCKKQD 127
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKR-SEMDWALKRQGAVLSGSAV 140
A V S GI+ + R+KR S+ D +
Sbjct: 128 YYHA----------VASEVNYEGIYDNDFHGSPPPSRSKRFSDKDQMEHTE--------- 168
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
++L+GLP+ KK + +F E+ + + I G+ TG AY++F E A+KA
Sbjct: 169 ---ILKLRGLPFSVKKSQILEFFGDFELGDDKVHIACRPDGKATGEAYVEFASAEEAKKA 225
Query: 201 LLRHKEKIGHRLVTLVMS 218
+ + K IG R V L S
Sbjct: 226 MGKDKMTIGSRYVELFPS 243
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP+ C D+ KF GL+IV + + +GR +G AY+ F A+ AL R
Sbjct: 52 VVRLRGLPFNCTDIDIFKFFAGLDIVD---VLLVNKSGRFSGEAYVVFAGSMQADFALQR 108
Query: 204 HKEKIGHRLVTLVMSGAQWFLSPPLT--NETPISRLDLTGSP 243
++ +G R V + Q + + N I D GSP
Sbjct: 109 DRQNMGRRYVEVFRCKKQDYYHAVASEVNYEGIYDNDFHGSP 150
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 33/49 (67%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGR 88
G+++GEA VEF+S ++A++A+ + K +G RY+EL+ ++ A R
Sbjct: 206 GKATGEAYVEFASAEEAKKAMGKDKMTIGSRYVELFPSTPDEARRAESR 254
>gi|195171791|ref|XP_002026687.1| GL11864 [Drosophila persimilis]
gi|194111613|gb|EDW33656.1| GL11864 [Drosophila persimilis]
Length = 830
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 79/185 (42%), Gaps = 46/185 (24%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR +GEA + F S + AL+RHK ++G RYIE+Y G
Sbjct: 336 GRRNGEALIRFVSQEHRDMALKRHKHHIGARYIEVYRASG-------------------- 375
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
FLA + ++ A LS A Q +R++GLPY+C + V
Sbjct: 376 ---------EDFLAIAGGASNEAQ---------AFLSKGA--QVIIRMRGLPYDCTAKQV 415
Query: 160 EKFLEGLEI------VPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLV 213
+F E G+ GR TG A++ F ++ +A KAL RH+E IG R +
Sbjct: 416 LEFFTTGEAPCHVLDASEGVLFVKKPDGRATGDAFVLFANEGDAPKALGRHRESIGQRYI 475
Query: 214 TLVMS 218
L S
Sbjct: 476 ELFRS 480
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
C +R +GLP++ +D+ KF GL + G+ + GR G A I+FV +E+ + AL
Sbjct: 297 NCIVRARGLPWQSSDQDIAKFFRGLNVAKGGVALCLSPLGRRNGEALIRFVSQEHRDMAL 356
Query: 202 LRHKEKIGHRLVTLVMSGAQWFLS 225
RHK IG R + + + + FL+
Sbjct: 357 KRHKHHIGARYIEVYRASGEDFLA 380
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 50/178 (28%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+L + GR++G+A V F++ DA +AL RH+ ++G RYIEL+
Sbjct: 435 VLFVKKPDGRATGDAFVLFANEGDAPKALGRHRESIGQRYIELF---------------- 478
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
R+ +E+ L L S + C+RL+GLP
Sbjct: 479 --------------------------RSTTAEVQQVLH-----LITSGTTKNCIRLRGLP 507
Query: 152 YECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEK 207
YE E + FL+ I+ G+ + + G+ +G A+IQ +D E++ + + K
Sbjct: 508 YEAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQ-MDSEDSARLCAQRKHN 564
>gi|47225436|emb|CAG11919.1| unnamed protein product [Tetraodon nigroviridis]
Length = 751
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 93/211 (44%), Gaps = 51/211 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FF+ I + L + GR +GEA V F S + ALQRHK +MG+RYIE+Y
Sbjct: 269 ARFFRGLNIAKGGVALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGNRYIEVYKAT 328
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT +E+ L R+
Sbjct: 329 GEDFLKIAG-GTS------------------------------NEVAMFLSRE------- 350
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFL---EGLE-IVP-----NGITIPHDYAGRCTGVAYI 189
DQ +R++GLP+ E V F EGL+ P +GI GR TG A++
Sbjct: 351 --DQIIIRMRGLPFTATHEQVLSFFSPGEGLKGTCPVSGGKDGILFVRYPDGRPTGDAFV 408
Query: 190 QFVDKENAEKALLRHKEKIGHRLVTLVMSGA 220
F +E+A+ AL +HKE +G R + L S A
Sbjct: 409 LFACEEHAQCALRKHKEILGRRYIELFKSTA 439
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F GL I G+ + + GR G A ++FV +E+ + A
Sbjct: 250 DNTVIRARGLPWQSSDQDIARFFRGLNIAKGGVALCLNAQGRRNGEALVRFVSEEHRDLA 309
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G+R + + + + FL
Sbjct: 310 LQRHKHHMGNRYIEVYKATGEDFL 333
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGR-GT 90
IL + GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++ R +
Sbjct: 392 ILFVRYPDGRPTGDAFVLFACEEHAQCALRKHKEILGRRYIELFKSTAAEVQQVLNRYSS 451
Query: 91 GGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGL 150
V P V + L G D C+RL+GL
Sbjct: 452 APLIPVAPAPL-VSVLPTVSLLPP---------------------PGGLRD--CLRLRGL 487
Query: 151 PYECKKEDVEKFLEGL--EIVPNGI 173
PY ED+ FL ++ P+G+
Sbjct: 488 PYTAIIEDILNFLGEFTRDVRPHGV 512
>gi|224064269|ref|XP_002191895.1| PREDICTED: epithelial splicing regulatory protein 2 [Taeniopygia
guttata]
Length = 702
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 91/208 (43%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I + L + GR +GEA V F + + AL+RHK +MG RYIE+Y
Sbjct: 243 ARFFKGLNIAKGGVALCLNSQGRRNGEALVRFVNSEQRDLALERHKHHMGSRYIEVYKAT 302
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 303 GEEFLKIAG-GTSNE--------------VAQFLSKE----------------------- 324
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ +EDV FL V G + P GR TG A++ F
Sbjct: 325 --NQVIIRMRGLPFTATQEDVLGFLGSECPVTGGKEGLLFVKYPD---GRPTGDAFVLFS 379
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HKE +G R + L S A
Sbjct: 380 CEEYAQNALKKHKEILGKRYIELFRSTA 407
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +D+ +F +GL I G+ + + GR G A ++FV+ E + AL
Sbjct: 225 ETVIRARGLPWQSSDQDIARFFKGLNIAKGGVALCLNSQGRRNGEALVRFVNSEQRDLAL 284
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + FL
Sbjct: 285 ERHKHHMGSRYIEVYKATGEEFL 307
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 90/188 (47%), Gaps = 33/188 (17%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+L + GR +G+A V FS + AQ AL++HK +G RYIEL+ ++
Sbjct: 360 LLFVKYPDGRPTGDAFVLFSCEEYAQNALKKHKEILGKRYIELFRSTAAEVQQV------ 413
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++++++ + + + + + +GS D C+RL+GLP
Sbjct: 414 ----------------LNRYMSTPLIPTLPTPIIPVIPPPYTIATGSIRD--CVRLRGLP 455
Query: 152 YECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR----HK 205
Y +D+ +F+ +I P+G+ + + GR +G A+IQ ++A+KA + HK
Sbjct: 456 YTAGIDDILEFMGDATGDIKPHGVHMVLNQQGRPSGDAFIQM---KSADKAFMVAQKCHK 512
Query: 206 EKIGHRLV 213
+ + R V
Sbjct: 513 KMMKDRYV 520
Score = 37.4 bits (85), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELYMEEG 79
I P + ++ + GR SG+A ++ S D A Q+ HK M DRY+E++ G
Sbjct: 474 IKPHGVHMVLNQQGRPSGDAFIQMKSADKAFMVAQKCHKKMMKDRYVEVFQCSG 527
>gi|224084107|ref|XP_002307213.1| predicted protein [Populus trichocarpa]
gi|222856662|gb|EEE94209.1| predicted protein [Populus trichocarpa]
Length = 257
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 22/197 (11%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF + V++LL+ + +GR +GEA V F+ + ALQR + NMG RY+E++
Sbjct: 69 KFFAGLDIVDVLLV-NKSGRFTGEAFVVFAGPMQVEFALQRDRQNMGRRYVEVF------ 121
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
+ + V + GI+ + RAKR ++ K Q
Sbjct: 122 ----RCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPSRAKR----FSDKDQMEYTE----- 168
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
++++GLP+ KK ++ +F + +++ I I G+ TG AY++F+ E A++A+
Sbjct: 169 --ILKMRGLPFSAKKAEIIEFFKDFKLIDERIHIACRPDGKATGEAYVEFISAEEAKRAM 226
Query: 202 LRHKEKIGHRLVTLVMS 218
+ K IG R V L S
Sbjct: 227 SKDKMTIGSRYVELFPS 243
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP+ C ++ KF GL+IV + + +GR TG A++ F E AL R
Sbjct: 52 VVRLRGLPFNCSDVEILKFFAGLDIVD---VLLVNKSGRFTGEAFVVFAGPMQVEFALQR 108
Query: 204 HKEKIGHRLVTLVMSGAQWFLS--PPLTNETPISRLDLTGSP 243
++ +G R V + Q + + N I D GSP
Sbjct: 109 DRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSP 150
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
+FFK ++ I + G+++GEA VEF S ++A+RA+ + K +G RY+EL+
Sbjct: 186 EFFKDFKLIDERIHIACRPDGKATGEAYVEFISAEEAKRAMSKDKMTIGSRYVELFPSTQ 245
Query: 80 TSSKEANGR 88
++ A R
Sbjct: 246 DEARRAESR 254
>gi|357143317|ref|XP_003572878.1| PREDICTED: G-rich sequence factor 1-like isoform 1 [Brachypodium
distachyon]
Length = 292
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 27/200 (13%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY--MEEG 79
+FF + V+ LL+ + GR SGEA V F S A+ AL R++ NMG RY+E++ ++
Sbjct: 103 KFFVGLDIVDCLLVHKN-GRFSGEAFVVFPSTMQAEFALHRNRQNMGRRYVEVFRCKKQE 161
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAK-RSEMDWALKRQGAVLSGS 138
S A+ GGF + + S + + A+ +S MD+
Sbjct: 162 YYSAVASEVNQGGFFDSE--------YRHSPPPPRPKKPAEDKSSMDYTE---------- 203
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAE 198
++L+GLPY ED+ KF E+ + + I + G+ TG A+++F E A+
Sbjct: 204 -----VLKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAK 258
Query: 199 KALLRHKEKIGHRLVTLVMS 218
A+ + K IG R V L S
Sbjct: 259 TAMCKDKMTIGTRYVELFPS 278
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Query: 135 LSGSAVDQCC-----MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYI 189
L+G+ V+ +RL+GLP++C+ D+ KF GL+IV + H GR +G A++
Sbjct: 72 LAGAGVNSGIQSFPGVRLRGLPFDCEDLDIIKFFVGLDIV--DCLLVHK-NGRFSGEAFV 128
Query: 190 QFVDKENAEKALLRHKEKIGHRLVTLVMSGAQWFLS 225
F AE AL R+++ +G R V + Q + S
Sbjct: 129 VFPSTMQAEFALHRNRQNMGRRYVEVFRCKKQEYYS 164
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 31 NILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRG 89
N+ + G+++GEA VEF + + A+ A+ + K +G RY+EL+ + A RG
Sbjct: 232 NVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKDKMTIGTRYVELFPSTPEEASRAKSRG 290
>gi|328707990|ref|XP_001948909.2| PREDICTED: RNA-binding protein fusilli-like [Acyrthosiphon pisum]
Length = 571
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 99/235 (42%), Gaps = 52/235 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ L GR +GEA V F + + A +RH ++G RYIE+Y +ANG
Sbjct: 18 VTLCLSAHGRCNGEAVVRFVNQEHRDMATKRHNHHIGSRYIEVY--------KANGEDFI 69
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
G S+ + FLAK GA +R++GLP
Sbjct: 70 NVAGGNSSE-------VETFLAK-----------------GA--------HAIVRMRGLP 97
Query: 152 YECKKEDVEKFLEGLEIVPN------GITIPHDYAGRCTGVAYIQFVDKENAEKALLRHK 205
Y C +DV F E E + G+ GR TG A++ F D+++A KAL +H+
Sbjct: 98 YYCTAKDVITFFENGEQTSSVMYGEEGVLFVKKPDGRATGYAFVLFADEDDACKALSKHR 157
Query: 206 EKIGHRLVTLV---MSGAQWFLSPPLTNETPISRLDLTGS---PVRSTICVLCHP 254
+ +G R + L+ + Q FL+ + + D G+ PV +T V P
Sbjct: 158 DLMGTRYIELIRCTKAEVQQFLNRGMDQSVRSTASDSIGNITIPVTTTAGVNNSP 212
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 89/181 (49%), Gaps = 8/181 (4%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+L + GR++G A V F+ DDA +AL +H+ MG RYIEL ++ RG
Sbjct: 125 VLFVKKPDGRATGYAFVLFADEDDACKALSKHRDLMGTRYIELIRCTKAEVQQFLNRGMD 184
Query: 92 GFGGVKSTPY-GVGIFCISQFLAKWMRRAKRSEMDWA--LKRQGAVLSGSAVDQCCMRLQ 148
V+ST +G I + + + + L V++ S + + C+RL+
Sbjct: 185 Q--SVRSTASDSIGNITIPVTTTAGVNNSPTALLGHVPLLPLPQHVIT-SGIRKDCIRLR 241
Query: 149 GLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKE 206
GLPYE E + KFL IV +G+ I ++ G +G A+IQ ++ +A +A++
Sbjct: 242 GLPYEANVEHILKFLGEHSKNIVFHGVHIVYNSVGHASGEAFIQMNNEGSAAQAVMAKNH 301
Query: 207 K 207
K
Sbjct: 302 K 302
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 172 GITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGAQWFLS 225
G+T+ GRC G A ++FV++E+ + A RH IG R + + + + F++
Sbjct: 17 GVTLCLSAHGRCNGEAVVRFVNQEHRDMATKRHNHHIGSRYIEVYKANGEDFIN 70
>gi|198461689|ref|XP_001362087.2| GA20896 [Drosophila pseudoobscura pseudoobscura]
gi|198137420|gb|EAL26667.2| GA20896 [Drosophila pseudoobscura pseudoobscura]
Length = 910
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 79/185 (42%), Gaps = 46/185 (24%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR +GEA + F S + AL+RHK ++G RYIE+Y G
Sbjct: 336 GRRNGEALIRFVSQEHRDMALKRHKHHIGARYIEVYRASG-------------------- 375
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
FLA + ++ A LS A Q +R++GLPY+C + V
Sbjct: 376 ---------EDFLAIAGGASNEAQ---------AFLSKGA--QVIIRMRGLPYDCTAKQV 415
Query: 160 EKFLEGLEI------VPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLV 213
+F E G+ GR TG A++ F ++ +A KAL RH+E IG R +
Sbjct: 416 LEFFTTGEAPCHVLDANEGVLFVKKPDGRATGDAFVLFANEGDAPKALGRHRESIGQRYI 475
Query: 214 TLVMS 218
L S
Sbjct: 476 ELFRS 480
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
C +R +GLP++ +D+ KF GL + G+ + GR G A I+FV +E+ + AL
Sbjct: 297 NCIVRARGLPWQSSDQDIAKFFRGLNVAKGGVALCLSPLGRRNGEALIRFVSQEHRDMAL 356
Query: 202 LRHKEKIGHRLVTLVMSGAQWFLS 225
RHK IG R + + + + FL+
Sbjct: 357 KRHKHHIGARYIEVYRASGEDFLA 380
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 85/197 (43%), Gaps = 28/197 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+L + GR++G+A V F++ DA +AL RH+ ++G RYIEL+ ++ R
Sbjct: 435 VLFVKKPDGRATGDAFVLFANEGDAPKALGRHRESIGQRYIELFRSTTAEVQQVLNR--- 491
Query: 92 GFGGVKSTPYGVGIFCISQFLAKW--MRRAKRSEMDWALKRQGAV--------------- 134
+ + +A+ M+ ++ G V
Sbjct: 492 ---SMDPKTFETSSHSQPPLIAQLPTMQLPLLPQVGVVTHGNGRVPVPVPANLCPHPHPP 548
Query: 135 --LSGSAVDQCCMRLQGLPYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQ 190
L S + C+RL+GLPYE E + FL+ I+ G+ + + G+ +G A+IQ
Sbjct: 549 QHLITSGTTKNCIRLRGLPYEAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQ 608
Query: 191 FVDKENAEKALLRHKEK 207
+D E++ + + K
Sbjct: 609 -MDSEDSARLCAQRKHN 624
>gi|308453513|ref|XP_003089469.1| hypothetical protein CRE_14401 [Caenorhabditis remanei]
gi|308240262|gb|EFO84214.1| hypothetical protein CRE_14401 [Caenorhabditis remanei]
Length = 264
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 32/182 (17%)
Query: 39 AGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKS 98
GR +GEA VEF + DDA +A++ + M +RYIE G +N
Sbjct: 108 TGRPNGEAYVEFKTQDDAGKAMENDRKEMSNRYIESEFLIGKQENNSN------------ 155
Query: 99 TPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKED 158
+ +F ++ ++ R G+ + +RL+G+P+ CK+ED
Sbjct: 156 ----ILVFSVTDVEGEFEFRPD--------------PDGNGEENHVVRLRGIPWSCKEED 197
Query: 159 VEKFLEGLEIVPNGITIPHDYAGRC--TGVAYIQFVDKENAEKALLRHKEKIGHRLVTLV 216
+ +F +GLE +P I I R +G A+++F + AE A+ + +G R V+LV
Sbjct: 198 INQFFDGLEPLPAEIVIGGTGGPRSRPSGEAFVRFATQAAAEAAMEYNNRHMGTRWVSLV 257
Query: 217 MS 218
M+
Sbjct: 258 MA 259
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVD 193
+ SG + +RL+GLP+ ++D+++F GL + GR G AY++F
Sbjct: 65 ISSGPPLKGQYVRLRGLPFNATEKDIQEFFSGLGVKRVKFVC---TTGRPNGEAYVEFKT 121
Query: 194 KENAEKALLRHKEKIGHRLV 213
+++A KA+ ++++ +R +
Sbjct: 122 QDDAGKAMENDRKEMSNRYI 141
>gi|358252891|dbj|GAA50442.1| epithelial splicing regulatory protein 1/2 [Clonorchis sinensis]
Length = 846
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 90/209 (43%), Gaps = 48/209 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L+ GR +GEA + F+ + AL++HK +MG RY+E+Y A GR
Sbjct: 439 ISLVLSKIGRRNGEALIRFTDQEQRDLALRKHKHHMGQRYVEVYA--------AQGREFV 490
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
F G ++T +FL K+ ++ Q +R++GLP
Sbjct: 491 AFAGAETTE-------AEEFLKKF----------------------TSPYQALIRMRGLP 521
Query: 152 YECKKEDVEKFLE----GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEK 207
Y + V +F ++ G+ + GR TG A++ F ++ EKAL H +
Sbjct: 522 YATTVQQVLEFFSNTDCAVQFGEEGVLFVNRRNGRATGDAFVIFENQAIGEKALQNHWQH 581
Query: 208 IGHRLVTLVMSGA-------QWFLSPPLT 229
IG+R + L S L+PPLT
Sbjct: 582 IGNRYIELFKSTPAEVNQVMNAVLNPPLT 610
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 125 DWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCT 184
D ++R+ V+ D +R +GLP++ D+ F GL I GI++ GR
Sbjct: 395 DELIRRKSEVVD----DGHVIRARGLPWQATDLDIFHFFSGLNISNGGISLVLSKIGRRN 450
Query: 185 GVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGAQWFLS 225
G A I+F D+E + AL +HK +G R V + + + F++
Sbjct: 451 GEALIRFTDQEQRDLALRKHKHHMGQRYVEVYAAQGREFVA 491
>gi|270009942|gb|EFA06390.1| hypothetical protein TcasGA2_TC009268 [Tribolium castaneum]
Length = 751
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 81/197 (41%), Gaps = 54/197 (27%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ L GR +GEA ++F S + AL+RHK ++G RYIE+Y G G
Sbjct: 256 VALCLSAQGRRNGEALIKFESQEHRDMALKRHKHHIGPRYIEVYRASGEDFLSVAG---- 311
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
K SE L R AV+ +R++GLP
Sbjct: 312 ---------------------------GKSSEAQAFLSRGAAVI---------VRMRGLP 335
Query: 152 YECKKEDVEKF----------LEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
Y+C + V F L+G E G+ GR TG A++ F + +A KAL
Sbjct: 336 YDCTAKQVLDFFASGENSCTVLDGTE----GVLFVRKPDGRATGDAFVLFASESDAPKAL 391
Query: 202 LRHKEKIGHRLVTLVMS 218
+H+E IG R + L S
Sbjct: 392 SKHRECIGSRYIELFRS 408
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
C +R +GLP++ +D+ KF GL + G+ + GR G A I+F +E+ + AL
Sbjct: 226 CVVRARGLPWQSSDQDIAKFFSGLNVAKGGVALCLSAQGRRNGEALIKFESQEHRDMALK 285
Query: 203 RHKEKIGHRLVTLVMSGAQWFLS 225
RHK IG R + + + + FLS
Sbjct: 286 RHKHHIGPRYIEVYRASGEDFLS 308
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 23/168 (13%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+L + GR++G+A V F+S DA +AL +H+ +G RYIEL+ ++ R
Sbjct: 363 VLFVRKPDGRATGDAFVLFASESDAPKALSKHRECIGSRYIELFRSTTAEVQQVLNRS-- 420
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++ Y L Q + SG+ + C+RL+GLP
Sbjct: 421 ----LEARTY-------------EPEPLPPLLPHMPLLPQHYITSGTKKE--CIRLRGLP 461
Query: 152 YECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENA 197
YE + E + +FL I+ G+ + ++ G+ +G A+IQ +++A
Sbjct: 462 YEAQVEHILEFLGEYAKNIIFQGVHMVYNAQGQPSGEAFIQMDSEQSA 509
>gi|347968776|ref|XP_312018.5| AGAP002892-PA [Anopheles gambiae str. PEST]
gi|333467847|gb|EAA08189.6| AGAP002892-PA [Anopheles gambiae str. PEST]
Length = 589
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 48/180 (26%)
Query: 41 RSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKSTP 100
R +GEA + + D +A R+K +G RYIE +
Sbjct: 92 RQTGEAYIRVPTQADRNKAFSRNKQTIGHRYIEFF------------------------- 126
Query: 101 YGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVE 160
A + + AL+ SG V ++++GLP+ K+DV+
Sbjct: 127 -----------------NATEEQFEMALQEMDEGESGGPV----VKMRGLPWTSTKDDVK 165
Query: 161 KFLEGLEIVP--NGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
F +GL I NGI + D GR +G A ++F + +AE A+ +HKEKIG+R + L S
Sbjct: 166 AFFQGLTIKNGYNGILLLLDNLGRASGEAIVEFATEADAETAMGKHKEKIGNRYIELFRS 225
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 4/57 (7%)
Query: 23 FFKPIVPVN----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
FF+ + N ILLL D+ GR+SGEA VEF++ DA+ A+ +HK +G+RYIEL+
Sbjct: 167 FFQGLTIKNGYNGILLLLDNLGRASGEAIVEFATEADAETAMGKHKEKIGNRYIELF 223
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RL+GLP+ ++++ FL G+ I+ I H R TG AYI+ + + KA R+
Sbjct: 56 VRLRGLPWSITEDEIRSFLHGVNILHVHICF-HPQTKRQTGEAYIRVPTQADRNKAFSRN 114
Query: 205 KEKIGHRLVTLVMSGAQWF 223
K+ IGHR + + + F
Sbjct: 115 KQTIGHRYIEFFNATEEQF 133
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
FF P+ PV ++ + R SGE D F + ++A +A+++ K MG RYIEL+
Sbjct: 500 FFMPLRPVKCVVQMNSRKRPSGEGDAYFETKEEAIKAMRKDKEKMGSRYIELF 552
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++G+P+ C ++D+ F + + P + + R +G F KE A KA+ +
Sbjct: 482 CVHMRGMPFSCDEQDMYDFF--MPLRPVKCVVQMNSRKRPSGEGDAYFETKEEAIKAMRK 539
Query: 204 HKEKIGHRLVTLVMSGAQW 222
KEK+G R + L Q+
Sbjct: 540 DKEKMGSRYIELFAGQRQF 558
>gi|324975474|gb|ADY62662.1| putative RNA-binding protein [Hottentotta judaicus]
Length = 180
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 85/206 (41%), Gaps = 48/206 (23%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FF+ IV + L GR +GEA V F + + AL+RHK ++G RYIE+Y
Sbjct: 15 AKFFRGLNIVRGGVALCLSPQGRRNGEALVRFVNQEHRDMALKRHKHHIGQRYIEVYRAT 74
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G G E L R G V+
Sbjct: 75 GEDFVNVAG-------------------------------GSNHEAQTFLSRGGQVI--- 100
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIV------PNGITIPHDYAGRCTGVAYIQFV 192
+R++GLPY+C + V +F +IV G+ GR TG A++ F
Sbjct: 101 ------VRMRGLPYDCTPQQVIEFFSTGDIVCQVMDSEEGVLFVRKPDGRATGDAFVLFE 154
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMS 218
+E A KAL +H++ IG R + L S
Sbjct: 155 TEEMAGKALQKHRQVIGSRYIELFRS 180
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%)
Query: 146 RLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHK 205
R +GLP++ +D+ KF GL IV G+ + GR G A ++FV++E+ + AL RHK
Sbjct: 1 RARGLPWQSSDQDIAKFFRGLNIVRGGVALCLSPQGRRNGEALVRFVNQEHRDMALKRHK 60
Query: 206 EKIGHRLVTLVMSGAQWFLS 225
IG R + + + + F++
Sbjct: 61 HHIGQRYIEVYRATGEDFVN 80
>gi|51467948|ref|NP_001003856.1| RNA-binding protein 12 [Danio rerio]
gi|31324618|gb|AAP48571.1| swan [Danio rerio]
gi|190336635|gb|AAI62473.1| RNA binding motif protein 12 [Danio rerio]
gi|190337822|gb|AAI62102.1| RNA binding motif protein 12 [Danio rerio]
Length = 876
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 94/193 (48%), Gaps = 17/193 (8%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF + +I LL D+ GR+SG A V+F S ++ AL+R+ +G RYIE+
Sbjct: 321 FFHGLGIESIRLLKDNLGRNSGRALVKFYSPHESFEALKRNAGMIGQRYIEVSPATERQW 380
Query: 83 KEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQ 142
+E+ G G + + RR+ S + +R + S +D
Sbjct: 381 RESVGHSKAGGDSEHN---------------RHRRRSANSPTPSSGERARS-RSPHKLDY 424
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
C L+GLPYE + + + +F + L+IV + I I + GR TG +++F ++ + + AL
Sbjct: 425 CVY-LKGLPYEAENKQIFEFFKNLDIVEDSIYIAYGPNGRATGEGFVEFRNEMDYKAALG 483
Query: 203 RHKEKIGHRLVTL 215
H + +G R + +
Sbjct: 484 CHMQYMGSRFIQV 496
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 79/192 (41%), Gaps = 33/192 (17%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
+FFK IV +I + GR++GE VEF + D + AL H MG R+I+++
Sbjct: 442 EFFKNLDIVEDSIYIAYGPNGRATGEGFVEFRNEMDYKAALGCHMQYMGSRFIQVH---- 497
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA 139
I++ A R M + Q + G
Sbjct: 498 ---------------------------PITKKNMYEKIDAIRKRMQGSQGDQKSSSGGGK 530
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
+ C + +PY K+DV FL+G+E+ + + D G G A +QF E+A K
Sbjct: 531 SAKSCAHITNIPYNVTKKDVRLFLDGIELFEESLKVLVDSNGNGLGQAIVQFKSDEDALK 590
Query: 200 ALLRHKEKIGHR 211
A H++K+ R
Sbjct: 591 AERLHRQKLNGR 602
>gi|449277356|gb|EMC85572.1| Epithelial splicing regulatory protein 2 [Columba livia]
Length = 721
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 93/214 (43%), Gaps = 63/214 (29%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I + L + GR +GEA V F + + AL+RHK +MG RYIE+Y
Sbjct: 258 ARFFKGLNIAKGGVALCLNAQGRRNGEALVRFVNSEQRDLALERHKHHMGSRYIEVYKAT 317
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 318 GEEFLKIAG-GTSNE--------------VAQFLSKE----------------------- 339
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFL----------EGLEIV--PNGITIPHDYAGRCTGV 186
+Q +R++GLP+ +EDV FL EGL V P+ GR TG
Sbjct: 340 --NQVIIRMRGLPFTATQEDVLGFLGPECPVTGGKEGLLFVKYPD---------GRPTGD 388
Query: 187 AYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGA 220
A++ F +E A+ AL +HKE +G R + L S A
Sbjct: 389 AFVLFSCEEYAQNALKKHKEILGKRYIELFRSTA 422
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 38/202 (18%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A V FS + AQ AL++HK +G RYIEL+
Sbjct: 361 FLGPECPVTGGKEGLLFVKYPDGRPTGDAFVLFSCEEYAQNALKKHKEILGKRYIELFRS 420
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ ++++++ + + + + + +G
Sbjct: 421 TAAEVQQV----------------------LNRYMSTPLIPTLPTPIIPVIPPPYTIATG 458
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
S D C+RL+GLPY +D+ +F+ +I P+G+ + + GR +G A+IQ +
Sbjct: 459 SIRD--CVRLRGLPYTAGIDDILEFMGDATGDIKPHGVHMVLNQQGRPSGDAFIQM---K 513
Query: 196 NAEKALLR----HKEKIGHRLV 213
+A+KA + HK+ + R V
Sbjct: 514 SADKAFMVAQKCHKKMMKDRYV 535
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +D+ +F +GL I G+ + + GR G A ++FV+ E + AL
Sbjct: 240 ETVIRARGLPWQSSDQDIARFFKGLNIAKGGVALCLNAQGRRNGEALVRFVNSEQRDLAL 299
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + FL
Sbjct: 300 ERHKHHMGSRYIEVYKATGEEFL 322
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELYMEEGTSSKEA 85
I P + ++ + GR SG+A ++ S D A Q+ HK M DRY+E++ G
Sbjct: 489 IKPHGVHMVLNQQGRPSGDAFIQMKSADKAFMVAQKCHKKMMKDRYVEVFQCSGEEMNFV 548
Query: 86 NGRGTGGFGGVKSTP 100
GT G+ P
Sbjct: 549 LMGGTLNRSGLSPPP 563
>gi|47217849|emb|CAG02342.1| unnamed protein product [Tetraodon nigroviridis]
Length = 776
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 105/242 (43%), Gaps = 60/242 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I + L + GR +GEA V F + + AL+RHK +MG+RYIE+Y
Sbjct: 272 ARFFKGLSIARGGVALCLNAQGRRNGEALVRFINSEHRDLALERHKHHMGNRYIEVYKAT 331
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 332 GEEFLKIAG-GTSNE--------------VAQFLSKE----------------------- 353
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ ++V FL V +G + P GR TG A++ F
Sbjct: 354 --NQVIIRMRGLPFTATPQEVLSFLGPESPVTDGSEGLLFVKYPD---GRPTGDAFVLFS 408
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA-------QWFLSPPLTNETPISRLDLTGSPVR 245
+E A+ AL +HK+ +G R + L S A ++S PL + P S + PV
Sbjct: 409 CEEYAQNALKKHKQILGKRYIELFRSTAAEVQQVLNRYMSTPLISTLPPS--PMVSVPVL 466
Query: 246 ST 247
ST
Sbjct: 467 ST 468
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 90/201 (44%), Gaps = 28/201 (13%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A V FS + AQ AL++HK +G RYIEL+
Sbjct: 375 FLGPESPVTDGSEGLLFVKYPDGRPTGDAFVLFSCEEYAQNALKKHKQILGKRYIELFRS 434
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ R STP IS M + + L
Sbjct: 435 TAAEVQQVLNR-------YMSTPL------ISTLPPSPM-------VSVPVLSTPPFLPT 474
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
++ + C+RL+GLPY ED+ +F+ ++I P+G+ + + GR +G A+IQ +
Sbjct: 475 ASTARDCVRLRGLPYTAGIEDILEFMGEHTVDIKPHGVHMVLNQQGRPSGDAFIQMKSPD 534
Query: 196 NAEKALLR-HKEKIGHRLVTL 215
A + HK+ + R V +
Sbjct: 535 KAFMVAQKCHKKTMKDRYVEV 555
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 50/84 (59%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
++ +R +GLP++ +D+ +F +GL I G+ + + GR G A ++F++ E+ + A
Sbjct: 253 NETVIRARGLPWQSSDQDIARFFKGLSIARGGVALCLNAQGRRNGEALVRFINSEHRDLA 312
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G+R + + + + FL
Sbjct: 313 LERHKHHMGNRYIEVYKATGEEFL 336
>gi|410905415|ref|XP_003966187.1| PREDICTED: epithelial splicing regulatory protein 1-like [Takifugu
rubripes]
Length = 741
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 87/198 (43%), Gaps = 49/198 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ L + GR +GEA V F + + ALQRHK +MG+RYIE+Y G + G GT
Sbjct: 264 VALCLNAQGRRNGEALVRFINEEHRDLALQRHKHHMGNRYIEVYKATGEDFLKIAG-GTS 322
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+E+ L R+ DQ +R++GLP
Sbjct: 323 ------------------------------NEVAMFLSRE---------DQIIVRMRGLP 343
Query: 152 YECKKEDVEKFL---EGL-EIVP-----NGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+ E V F EGL E P +GI GR TG A++ F +E+A+ AL
Sbjct: 344 FTATHEQVLSFFSPGEGLKETCPISGGQDGILFVRYPDGRPTGDAFVLFACEEHAQCALR 403
Query: 203 RHKEKIGHRLVTLVMSGA 220
+HKE +G R + L S A
Sbjct: 404 KHKEILGRRYIELFKSTA 421
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 49/84 (58%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F GL I G+ + + GR G A ++F+++E+ + A
Sbjct: 232 DSTVIRARGLPWQSSDQDIARFFRGLNIAKGGVALCLNAQGRRNGEALVRFINEEHRDLA 291
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G+R + + + + FL
Sbjct: 292 LQRHKHHMGNRYIEVYKATGEDFL 315
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 75/179 (41%), Gaps = 28/179 (15%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGR-GT 90
IL + GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++ R +
Sbjct: 374 ILFVRYPDGRPTGDAFVLFACEEHAQCALRKHKEILGRRYIELFKSTAAEVQQVLNRYSS 433
Query: 91 GGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGL 150
V P + +S R C+RL+GL
Sbjct: 434 APLIPVAPAPLVSVLPAVSLLPPPGGMRD------------------------CLRLRGL 469
Query: 151 PYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKE 206
PY ED+ FL ++ +G+ + + GR +G +IQ E A +A R HK+
Sbjct: 470 PYTASIEDILNFLGEFTQDVRQHGVHMVLNQQGRPSGDCFIQMTSLERALQASQRLHKQ 528
>gi|326927219|ref|XP_003209790.1| PREDICTED: epithelial splicing regulatory protein 2-like [Meleagris
gallopavo]
Length = 701
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 93/214 (43%), Gaps = 63/214 (29%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I + L + GR +GEA V F + + AL+RHK +MG RYIE+Y
Sbjct: 243 ARFFKGLNIAKGGVALCLNAQGRRNGEALVRFVNSEQRDLALERHKHHMGSRYIEVYKAT 302
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 303 GEEFLKIAG-GTSN--------------EVAQFLSKE----------------------- 324
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFL----------EGLEIV--PNGITIPHDYAGRCTGV 186
+Q +R++GLP+ +EDV FL EGL V P+ GR TG
Sbjct: 325 --NQVIIRMRGLPFTATQEDVLGFLGPECPVTGGKEGLLFVKYPD---------GRPTGD 373
Query: 187 AYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGA 220
A++ F +E A+ AL +HKE +G R + L S A
Sbjct: 374 AFVLFSCEEYAQNALKKHKEILGKRYIELFRSTA 407
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 48/84 (57%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
++ +R +GLP++ +D+ +F +GL I G+ + + GR G A ++FV+ E + A
Sbjct: 224 NETVIRARGLPWQSSDQDIARFFKGLNIAKGGVALCLNAQGRRNGEALVRFVNSEQRDLA 283
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 284 LERHKHHMGSRYIEVYKATGEEFL 307
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 38/202 (18%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A V FS + AQ AL++HK +G RYIEL+
Sbjct: 346 FLGPECPVTGGKEGLLFVKYPDGRPTGDAFVLFSCEEYAQNALKKHKEILGKRYIELFRS 405
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ ++++++ + + + + + +G
Sbjct: 406 TAAEVQQV----------------------LNRYMSTPLIPTLPTPIIPVIPPPYTIATG 443
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
S D C+RL+GLPY +D+ F+ +I P+G+ + + GR +G A+IQ +
Sbjct: 444 SIRD--CVRLRGLPYTAGIDDILDFMGDATADIKPHGVHMVLNQQGRPSGDAFIQM---K 498
Query: 196 NAEKALLR----HKEKIGHRLV 213
+A+KA + HK+ + R V
Sbjct: 499 SADKAFMVAQKCHKKMMKDRYV 520
Score = 37.4 bits (85), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELYMEEGTSSKEA 85
I P + ++ + GR SG+A ++ S D A Q+ HK M DRY+E++ S +E
Sbjct: 474 IKPHGVHMVLNQQGRPSGDAFIQMKSADKAFMVAQKCHKKMMKDRYVEVFQ---CSGEEM 530
Query: 86 NGRGTGG 92
N GG
Sbjct: 531 NFVLMGG 537
>gi|71895579|ref|NP_001025737.1| epithelial splicing regulatory protein 2 [Gallus gallus]
gi|75571416|sp|Q5ZLR4.1|ESRP2_CHICK RecName: Full=Epithelial splicing regulatory protein 2; AltName:
Full=RNA-binding motif protein 35B; AltName:
Full=RNA-binding protein 35B
gi|53128733|emb|CAG31329.1| hypothetical protein RCJMB04_5c3 [Gallus gallus]
Length = 701
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 93/214 (43%), Gaps = 63/214 (29%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I + L + GR +GEA V F + + AL+RHK +MG RYIE+Y
Sbjct: 243 ARFFKGLNIAKGGVALCLNAQGRRNGEALVRFVNSEQRDLALERHKHHMGSRYIEVYKAT 302
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 303 GEEFLKIAG-GTSN--------------EVAQFLSKE----------------------- 324
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFL----------EGLEIV--PNGITIPHDYAGRCTGV 186
+Q +R++GLP+ +EDV FL EGL V P+ GR TG
Sbjct: 325 --NQVIIRMRGLPFTATQEDVLGFLGPECPVTGGKEGLLFVKYPD---------GRPTGD 373
Query: 187 AYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGA 220
A++ F +E A+ AL +HKE +G R + L S A
Sbjct: 374 AFVLFSCEEYAQNALKKHKEILGKRYIELFRSTA 407
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 38/202 (18%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A V FS + AQ AL++HK +G RYIEL+
Sbjct: 346 FLGPECPVTGGKEGLLFVKYPDGRPTGDAFVLFSCEEYAQNALKKHKEILGKRYIELFRS 405
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ ++++++ + + + + + +G
Sbjct: 406 TAAEVQQ----------------------VLNRYMSTPLIPTLPTPIIPVIPPPYTIATG 443
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
S D C+RL+GLPY +D+ F+ +I P+G+ + + GR +G A+IQ +
Sbjct: 444 SIRD--CVRLRGLPYTAGIDDILDFMGDATADIKPHGVHMVLNQQGRPSGDAFIQM---K 498
Query: 196 NAEKALLR----HKEKIGHRLV 213
+A+KA + HK+ + R V
Sbjct: 499 SADKAFMVAQKCHKKMMKDRYV 520
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +D+ +F +GL I G+ + + GR G A ++FV+ E + AL
Sbjct: 225 ETVIRARGLPWQSSDQDIARFFKGLNIAKGGVALCLNAQGRRNGEALVRFVNSEQRDLAL 284
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + FL
Sbjct: 285 ERHKHHMGSRYIEVYKATGEEFL 307
Score = 37.4 bits (85), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELYMEEGTSSKEA 85
I P + ++ + GR SG+A ++ S D A Q+ HK M DRY+E++ S +E
Sbjct: 474 IKPHGVHMVLNQQGRPSGDAFIQMKSADKAFMVAQKCHKKMMKDRYVEVFQ---CSGEEM 530
Query: 86 NGRGTGG 92
N GG
Sbjct: 531 NFVLMGG 537
>gi|351702538|gb|EHB05457.1| RNA-binding protein 12 [Heterocephalus glaber]
Length = 850
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 91/184 (49%), Gaps = 13/184 (7%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ LL D GR++G V+F S D AL+R++ M RY+E+ + + E G
Sbjct: 332 VHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEI-----SPATERQWVAAG 386
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
G K + +G S + + R+K + + +G C+ L+GLP
Sbjct: 387 GHITFKQS---MGPSGQSHPPPQTLPRSKSPSGQKRSRSRSPHEAG-----FCVYLKGLP 438
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL RHK+ +G+R
Sbjct: 439 FEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 212 LVTL 215
+ +
Sbjct: 499 FIQV 502
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDTIRKRLQNFSYDQREMVLNPEGDVNSA--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K+
Sbjct: 543 -KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 EHLHRKKLNGR 612
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 774 TVIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVI 833
Query: 203 RHKEK-IGHRLVTLVM 217
++ IG R V LV+
Sbjct: 834 DLNDRPIGSRKVKLVL 849
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++
Sbjct: 3 VVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMM 58
Query: 203 RHKEKIGHRLVTLVMS 218
R I VTL++S
Sbjct: 59 RTGGTIKGSKVTLLLS 74
>gi|444729174|gb|ELW69601.1| RNA-binding protein 12 [Tupaia chinensis]
Length = 932
Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 60/219 (27%), Positives = 103/219 (47%), Gaps = 27/219 (12%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF + + LL D GR++G V+F S D AL+R++ M RY+E+ + +
Sbjct: 323 FFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-----SPA 377
Query: 83 KEANGRGTGGFGGVKST--PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
E GG K + P G SQ L RS+ KR + A
Sbjct: 378 TERQWVAAGGHITFKQSMGPSG-QTHPPSQTLP-------RSKSPSGQKRSRSRSPHEA- 428
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
C+ L+GLP+E + + V F + L+IV + I I + G+ TG +++F ++ + + A
Sbjct: 429 -GFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAA 487
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDL 239
L RHK+ +G+R + + P+T + + ++D+
Sbjct: 488 LCRHKQYMGNRFIQV----------HPITKKGMLEKIDM 516
Score = 64.7 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMMLNTEGDVNSA--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K+
Sbjct: 543 -KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQAVVQFKNEDDARKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 ERLHRKKLNGR 612
Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 858 IKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDL 917
Query: 205 KEK-IGHRLVTLVM 217
++ IG R V LV+
Sbjct: 918 NDRPIGSRKVKLVL 931
Score = 39.7 bits (91), Expect = 1.5, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++R
Sbjct: 5 IRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMMRT 60
Query: 205 KEKIGHRLVTLVMS 218
I VTL++S
Sbjct: 61 GGTIKGSKVTLLLS 74
>gi|350594874|ref|XP_003483994.1| PREDICTED: RNA-binding protein 12 isoform 1 [Sus scrofa]
gi|350594876|ref|XP_003483995.1| PREDICTED: RNA-binding protein 12 isoform 2 [Sus scrofa]
gi|350594878|ref|XP_003483996.1| PREDICTED: RNA-binding protein 12 isoform 3 [Sus scrofa]
Length = 933
Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 23/218 (10%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF + + LL D GR++G V+F S D AL+R++ M RY+E+ +
Sbjct: 322 EFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-----SP 376
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
+ E GG K + +G + + + R+K + + +G
Sbjct: 377 ATERQWVAAGGHITFKQS---IGPSGQTHPPPQTLPRSKSPSGQKRSRSRSPHEAGF--- 430
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
C+ L+GLP+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL
Sbjct: 431 --CVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAAL 488
Query: 202 LRHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDL 239
RHK+ +G+R + + P+T + + ++D+
Sbjct: 489 CRHKQYMGNRFIQV----------HPITKKGMLEKIDM 516
Score = 64.3 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMMLNPEGDVNSA--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K+
Sbjct: 543 -KVCAHITNIPFSVTKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 ERLHRKKLNGR 612
Score = 40.0 bits (92), Expect = 1.4, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 859 IKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDL 918
Query: 205 KEK-IGHRLVTLVM 217
++ IG R V LV+
Sbjct: 919 NDRPIGSRKVKLVL 932
Score = 39.7 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++R
Sbjct: 5 IRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMMRT 60
Query: 205 KEKIGHRLVTLVMS 218
I VTL++S
Sbjct: 61 GGTIKGSKVTLLLS 74
>gi|328779875|ref|XP_397080.4| PREDICTED: epithelial splicing regulatory protein 2 [Apis
mellifera]
Length = 1215
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 82/193 (42%), Gaps = 46/193 (23%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ L GR +GEA V F + + AL+RHK +MG RYIE+Y G G GT
Sbjct: 786 VALCLSPMGRRNGEALVRFVNKEHRDMALKRHKHHMGGRYIEVYKASGEDFVGVAG-GTS 844
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
G A LS A Q +R++GLP
Sbjct: 845 G-------------------------------------EAHAFLSRGA--QVIVRMRGLP 865
Query: 152 YEC-KKEDVEKFLEGLEIV-----PNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHK 205
Y+C K+ V FL G + +G+ GR TG A++ F +E+A KAL +H+
Sbjct: 866 YDCVAKQVVXFFLSGQKPCHVLDGEDGVLFVKKPDGRATGDAFVLFAKEEDAVKALSKHR 925
Query: 206 EKIGHRLVTLVMS 218
+ IG R + L S
Sbjct: 926 DCIGSRYIELFRS 938
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 25/171 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+L + GR++G+A V F+ +DA +AL +H+ +G RYIEL+ ++ R
Sbjct: 893 VLFVKKPDGRATGDAFVLFAKEEDAVKALSKHRDCIGSRYIELFRSTIAEVQQVLNRAID 952
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
P V + + Q + SG+ D C+RL+GLP
Sbjct: 953 --------PKQV------------VLPTPPIPQLPPIVPQHIITSGTRKD--CVRLRGLP 990
Query: 152 YECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
YE E + +F+ IV G+ + ++ G+ +G A+IQ +D E++ A
Sbjct: 991 YEALVEHILEFMGEHSKNIVYQGVHMVYNAQGQPSGEAFIQ-MDSESSAYA 1040
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C +R +GLP++ +D+ KF GL + G+ + GR G A ++FV+KE+ + A
Sbjct: 754 NGCVVRARGLPWQSSDQDIAKFFRGLNVAKGGVALCLSPMGRRNGEALVRFVNKEHRDMA 813
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + F+
Sbjct: 814 LKRHKHHMGGRYIEVYKASGEDFV 837
>gi|195124401|ref|XP_002006681.1| GI18454 [Drosophila mojavensis]
gi|193911749|gb|EDW10616.1| GI18454 [Drosophila mojavensis]
Length = 1008
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 82/189 (43%), Gaps = 54/189 (28%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR +GEA + F S + AL+RHK ++G RYIE+Y G
Sbjct: 340 GRRNGEALIRFVSQEHRDMALKRHKHHIGSRYIEVYRASG-------------------- 379
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
FLA + ++ A LS A Q +R++GLPY+C + V
Sbjct: 380 ---------EDFLAIAGGASNEAQ---------AFLSKGA--QVIIRMRGLPYDCTPKQV 419
Query: 160 EKF----------LEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIG 209
+F L+G E G+ GR TG A++ F ++ ++ KAL RH+E IG
Sbjct: 420 LEFFTTGESPCHVLDGSE----GVLFVKKPDGRATGDAFVLFANESDSPKALGRHRESIG 475
Query: 210 HRLVTLVMS 218
R + L S
Sbjct: 476 QRYIELFRS 484
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
C +R +GLP++ +D+ KF GL + G+ + GR G A I+FV +E+ + AL
Sbjct: 301 NCIVRARGLPWQSSDQDIAKFFRGLNVAKGGVALCLSPLGRRNGEALIRFVSQEHRDMAL 360
Query: 202 LRHKEKIGHRLVTLVMSGAQWFLS 225
RHK IG R + + + + FL+
Sbjct: 361 KRHKHHIGSRYIEVYRASGEDFLA 384
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 81/187 (43%), Gaps = 24/187 (12%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSK-------- 83
+L + GR++G+A V F++ D+ +AL RH+ ++G RYIEL+ +
Sbjct: 439 VLFVKKPDGRATGDAFVLFANESDSPKALGRHRESIGQRYIELFRSTTAEVQQVLNRSMD 498
Query: 84 ----EANGRGTGGFGGVKSTPY-------GVGIFCISQFLAKWMRRAKRSEMDWALKRQG 132
E+N G + P VG L A + + L
Sbjct: 499 PKTYESNNHGQPPL--IAQLPTMQLPLLPQVGA-AAGHALNPLTANASHANLCPPLTHAP 555
Query: 133 AVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQ 190
L S + C+RL+GLPYE E + FL+ I+ G+ + + G+ +G A+IQ
Sbjct: 556 QHLITSGTTKNCIRLRGLPYEAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQ 615
Query: 191 FVDKENA 197
+++A
Sbjct: 616 MDSEDSA 622
>gi|21618692|gb|AAH31468.1| RNA binding motif protein 35A [Mus musculus]
Length = 444
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 82 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 141
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 142 GEDFLKIAG-GTSN--------------EVAQFLSKE----------------------- 163
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 164 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 218
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HKE +G R + L S A
Sbjct: 219 CEEYAQNALRKHKELLGKRYIELFRSTA 246
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 199 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKELLGKRYIELFRSTAAEVQQ------- 251
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 252 ---------------VLNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNVRD--CIRLRGLP 293
Query: 152 YECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 294 YAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTM 353
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 354 KDRYVEVFQCSAE 366
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 63 DSTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 122
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 123 LQRHKHHMGTRYIEVYKATGEDFL 146
>gi|410953920|ref|XP_003983616.1| PREDICTED: RNA-binding protein 12-like isoform 1 [Felis catus]
Length = 1482
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 91/184 (49%), Gaps = 13/184 (7%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ LL D GR++G V+F S D AL+R++ M RY+E+ + + E G
Sbjct: 332 VHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-----SPATERQWVAAG 386
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
G K + +G + + + R+K + + +G C+ L+GLP
Sbjct: 387 GHITFKQS---IGPSGQTHPPPQTLPRSKSPSGQKRSRSRSPHEAG-----FCVYLKGLP 438
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL RHK+ +G+R
Sbjct: 439 FEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 212 LVTL 215
+ +
Sbjct: 499 FIQV 502
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMMLNPEGDVSSA--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K+
Sbjct: 543 -KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 ERLHRKKLNGR 612
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++
Sbjct: 3 VVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMM 58
Query: 203 RHKEKIGHRLVTLVMS 218
R I VTL++S
Sbjct: 59 RTGGTIKGSKVTLLLS 74
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 872 TVIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVI 931
Query: 203 RHKEK-IGHRLVTLV 216
++ IG R V L+
Sbjct: 932 DLNDRPIGSRKVKLM 946
>gi|356559210|ref|XP_003547893.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like [Glycine
max]
Length = 264
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 95/199 (47%), Gaps = 25/199 (12%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF + V++LL+ + +GR SGEA V F+ + ALQR + NMG RY+E++ +
Sbjct: 75 KFFAGLTIVDVLLV-NKSGRFSGEAFVVFAGAMQVEFALQRDRQNMGRRYVEVFRCKKQD 133
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
A + G+ Y Q + R+KR +
Sbjct: 134 YYNAVAAEIK-YEGIYDNDY--------QGSSPPPSRSKR-------------FNDKDQM 171
Query: 142 QCC--MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
+C ++++GLP++ K + +F + +++ + + I G+ TG AY++FV E A++
Sbjct: 172 ECTEILKMRGLPFQVTKSQIVEFFKDFKLIEDRVHIACRPDGKSTGEAYVEFVSAEEAKR 231
Query: 200 ALLRHKEKIGHRLVTLVMS 218
A+ + K IG R V L S
Sbjct: 232 AMSKDKMTIGSRYVELFPS 250
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP+ C D+ KF GL IV + + +GR +G A++ F E AL R
Sbjct: 58 VVRLRGLPFNCTDIDILKFFAGLTIVD---VLLVNKSGRFSGEAFVVFAGAMQVEFALQR 114
Query: 204 HKEKIGHRLVTLVMSGAQWFLS 225
++ +G R V + Q + +
Sbjct: 115 DRQNMGRRYVEVFRCKKQDYYN 136
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGR 88
G+S+GEA VEF S ++A+RA+ + K +G RY+EL+ ++ A R
Sbjct: 213 GKSTGEAYVEFVSAEEAKRAMSKDKMTIGSRYVELFPSTPDEARRAESR 261
>gi|334321772|ref|XP_001372905.2| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like
[Monodelphis domestica]
Length = 362
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 10/101 (9%)
Query: 120 KRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDY 179
R+ D +L G +L C+R GLP+ C KE + F GLE VP+GI +P D+
Sbjct: 28 NRASPDGSLIANGGLL--------CIR--GLPFGCNKETIRHFFSGLETVPSGIILPVDF 77
Query: 180 AGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGA 220
G+ TG A +QF +E AE A+ +HK + R + + +G+
Sbjct: 78 QGKSTGTALVQFASQEAAEIAIRKHKGRPEPRYLENLKNGS 118
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ P+ + + + G+++GEADV+F + +DA A+ + K+ M RYIEL++
Sbjct: 229 HFFSPLCPLRVHIEIGEDGKATGEADVDFVTHEDAVAAMVKEKTYMQHRYIELFL 283
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 91/223 (40%), Gaps = 39/223 (17%)
Query: 28 VPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIEL------------- 74
VP I+L D G+S+G A V+F+S + A+ A+++HK RY+E
Sbjct: 67 VPSGIILPVDFQGKSTGTALVQFASQEAAEIAIRKHKGRPEPRYLENLKNGSVPMPTHWG 126
Query: 75 -------------YMEEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKR 121
Y +G + G G G++ + ++ K R
Sbjct: 127 PFRAFVVKQRLGPYDRQGPELRLKTVSGEGSDKGMRPRVFER---LNGSYICK-NRSNDD 182
Query: 122 SEMDWAL-------KRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGIT 174
+D+ + R G + +A + ++GLPY+ D+ F L + I
Sbjct: 183 PSIDFNISTRRIPNNRFGDFIFHNATCHHWVHMRGLPYKATVNDIYHFFSPLCPLRVHIE 242
Query: 175 IPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVM 217
I D G+ TG A + FV E+A A+++ K + HR + L +
Sbjct: 243 IGED--GKATGEADVDFVTHEDAVAAMVKEKTYMQHRYIELFL 283
>gi|324507711|gb|ADY43264.1| Heterogeneous nuclear ribonucleoprotein F [Ascaris suum]
Length = 435
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 98/233 (42%), Gaps = 34/233 (14%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF + ++++ + GR SGEA V ++ A+ AL+R+K NMG RY+E++ G
Sbjct: 129 EFFSGLDVADVVIDKEPGGRPSGEAFVRLANKQHAEMALERNKKNMGTRYVEVFRSSGEE 188
Query: 82 SKEANGRGTGGFGGVKSTPYGV-----GIFCISQFLAKW-----------MRRAKRSEMD 125
+ A G+ P G G+ + ++ M R + D
Sbjct: 189 MENAQYTTAASRRGMFPAPRGEPIPLRGLMAAGGYRDRYGYGAGGPMRAPMGRGRPGPYD 248
Query: 126 WALKR-----------QGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGIT 174
R + VL + MR GLPY D+E F + L V I
Sbjct: 249 VPYDRFSRYGGGFGGYEEDVLDYDVSTKVYMR--GLPYNANALDIEDFFKPLNCVE--IR 304
Query: 175 IPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGAQWFLSPP 227
+ ++ R +G AY+ F A AL R+K+ IG R + L SGA + PP
Sbjct: 305 LGYNEDRRPSGDAYVLFSTMAEARDALSRNKKSIGTRYIEL-FSGAN--VPPP 354
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 86/207 (41%), Gaps = 52/207 (25%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
F + + ++ GR+SGE VE + + A + K M RYIE
Sbjct: 26 NFLQGLYVRSVTFTLTATGRASGECYVELTDAAAVEEAKKFDKKEMSSRYIE-------- 77
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA-- 139
+F +S+ SE+ W + R G + S +
Sbjct: 78 -----------------------VFSVSE-----------SEVSWMI-RHGVIKSADSNG 102
Query: 140 -----VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDK 194
+ +RL+G+P+ D+++F GL++ + I + GR +G A+++ +K
Sbjct: 103 TSTGTSNNYVVRLRGIPFSATVADIKEFFSGLDVA--DVVIDKEPGGRPSGEAFVRLANK 160
Query: 195 ENAEKALLRHKEKIGHRLVTLVMSGAQ 221
++AE AL R+K+ +G R V + S +
Sbjct: 161 QHAEMALERNKKNMGTRYVEVFRSSGE 187
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%)
Query: 11 LIHITYCLLCSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDR 70
L + L FFKP+ V I L ++ R SG+A V FS++ +A+ AL R+K ++G R
Sbjct: 282 LPYNANALDIEDFFKPLNCVEIRLGYNEDRRPSGDAYVLFSTMAEARDALSRNKKSIGTR 341
Query: 71 YIELY 75
YIEL+
Sbjct: 342 YIELF 346
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RL+GLP+ K++DV FL+GL + +T GR +G Y++ D E+A
Sbjct: 10 VRLRGLPFSAKEDDVRNFLQGLYV--RSVTFTLTATGRASGECYVELTDAAAVEEAKKFD 67
Query: 205 KEKIGHRLVTL 215
K+++ R + +
Sbjct: 68 KKEMSSRYIEV 78
>gi|195381217|ref|XP_002049351.1| GJ21539 [Drosophila virilis]
gi|194144148|gb|EDW60544.1| GJ21539 [Drosophila virilis]
Length = 982
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 81/189 (42%), Gaps = 54/189 (28%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR +GEA + F S + AL+RHK ++G RYIE+Y G
Sbjct: 317 GRRNGEALIRFVSQEHRDMALKRHKHHIGSRYIEVYRASG-------------------- 356
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
FLA + ++ A LS A Q +R++GLPY+C + V
Sbjct: 357 ---------EDFLAIAGGASNEAQ---------AFLSKGA--QVIIRMRGLPYDCTPKQV 396
Query: 160 EKF----------LEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIG 209
F L+G E G+ GR TG A++ F ++ ++ KAL RH+E IG
Sbjct: 397 LDFFTTGEAPCHVLDGNE----GVLFVKKPDGRATGDAFVLFANESDSSKALGRHRESIG 452
Query: 210 HRLVTLVMS 218
R + L S
Sbjct: 453 QRYIELFRS 461
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
C +R +GLP++ +D+ KF GL + G+ + GR G A I+FV +E+ + AL
Sbjct: 278 NCIVRARGLPWQSSDQDIAKFFRGLNVAKGGVALCLSPLGRRNGEALIRFVSQEHRDMAL 337
Query: 202 LRHKEKIGHRLVTLVMSGAQWFLS 225
RHK IG R + + + + FL+
Sbjct: 338 KRHKHHIGSRYIEVYRASGEDFLA 361
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 81/187 (43%), Gaps = 24/187 (12%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSK-------- 83
+L + GR++G+A V F++ D+ +AL RH+ ++G RYIEL+ +
Sbjct: 416 VLFVKKPDGRATGDAFVLFANESDSSKALGRHRESIGQRYIELFRSTTAEVQQVLNRSMD 475
Query: 84 ----EANGRGTGGFGGVKSTPY-------GVGIFCISQFLAKWMRRAKRSEMDWALKRQG 132
E+N G + P VG L A + + L
Sbjct: 476 PKTYESNNHGQPPL--IAQLPTMQLPLLPQVGA-AAGHALNPLTANASHANLCPQLTHAP 532
Query: 133 AVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQ 190
L S + C+RL+GLPYE E + FL+ I+ G+ + + G+ +G A+IQ
Sbjct: 533 QHLITSGTTKNCIRLRGLPYEAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQ 592
Query: 191 FVDKENA 197
+++A
Sbjct: 593 MDSEDSA 599
>gi|284004917|ref|NP_001164804.1| RNA-binding protein 12 [Oryctolagus cuniculus]
gi|217038336|gb|ACJ76629.1| RNA binding motif protein 12 (predicted) [Oryctolagus cuniculus]
Length = 940
Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 26/219 (11%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF + + LL D GR++G V+F S D AL+R++ M RY+E+ + +
Sbjct: 323 FFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-----SPA 377
Query: 83 KEANGRGTGGFGGVKST--PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
E GG K + P G Q + RS+ KR + A
Sbjct: 378 TERQWVAAGGHITFKQSMGPSG-------QTHPPPPQTLPRSKSPSGQKRSRSRSPHEA- 429
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
C+ L+GLP+E + + V F + L+IV + I I + G+ TG +++F ++ + + A
Sbjct: 430 -GFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAA 488
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDL 239
L RHK+ +G+R + + P+T + + ++D+
Sbjct: 489 LCRHKQYMGNRFIQV----------HPITKKGMLEKIDM 517
Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 450 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----P 505
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 506 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMMLNPEGDVNSA--- 543
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K+
Sbjct: 544 -KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKS 602
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 603 EHLHRKKLNGR 613
Score = 39.7 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++R
Sbjct: 5 IRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMMRT 60
Query: 205 KEKIGHRLVTLVMS 218
I VTL++S
Sbjct: 61 GGTIKGSKVTLLLS 74
Score = 39.3 bits (90), Expect = 2.0, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 866 IKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDL 925
Query: 205 KEK-IGHRLVTLVM 217
++ IG R V L++
Sbjct: 926 NDRPIGSRKVKLIL 939
>gi|383856881|ref|XP_003703935.1| PREDICTED: uncharacterized protein LOC100878893 [Megachile
rotundata]
Length = 1212
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 83/193 (43%), Gaps = 46/193 (23%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ L GR +GEA V F + + AL+RHK +MG RYIE+Y G G GT
Sbjct: 783 VALCLSPMGRRNGEALVRFVNKEHRDMALKRHKHHMGGRYIEVYKASGEDFVGVAG-GTS 841
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
G A LS A Q +R++GLP
Sbjct: 842 G-------------------------------------EAHAFLSRGA--QVIVRMRGLP 862
Query: 152 YEC-KKEDVEKFLEGLEIV-----PNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHK 205
Y+C K+ ++ FL G + +G+ GR TG A++ F +E+A KAL +H+
Sbjct: 863 YDCVAKQVLDFFLTGQKPCHVLDGEDGVLFVKKPDGRATGDAFVLFAKEEDAVKALSKHR 922
Query: 206 EKIGHRLVTLVMS 218
+ IG R + L S
Sbjct: 923 DCIGSRYIELFRS 935
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Query: 105 IFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQ-CCMRLQGLPYECKKEDVEKFL 163
+ C+ Q + K + E+ + G VD C +R +GLP++ +D+ KF
Sbjct: 714 MICVIQRMIKDGHIFQNPEVVNIVLEPGICSKDEEVDNGCVVRARGLPWQSSDQDIAKFF 773
Query: 164 EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGAQWF 223
GL + G+ + GR G A ++FV+KE+ + AL RHK +G R + + + + F
Sbjct: 774 RGLNVAKGGVALCLSPMGRRNGEALVRFVNKEHRDMALKRHKHHMGGRYIEVYKASGEDF 833
Query: 224 L 224
+
Sbjct: 834 V 834
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 25/171 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+L + GR++G+A V F+ +DA +AL +H+ +G RYIEL+ ++ R
Sbjct: 890 VLFVKKPDGRATGDAFVLFAKEEDAVKALSKHRDCIGSRYIELFRSTIAEVQQVLNRAID 949
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
P V + + Q + SG+ D C+RL+GLP
Sbjct: 950 --------PKQV------------VLPTPPIPQLPPILPQHIITSGTRKD--CVRLRGLP 987
Query: 152 YECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
YE E + +F+ IV G+ + ++ G+ +G A+IQ +D E++ A
Sbjct: 988 YEALVEHILEFMGEHSKNIVYQGVHMVYNAQGQPSGEAFIQ-MDSESSAYA 1037
>gi|74136241|ref|NP_001028012.1| RNA-binding protein 12 [Macaca mulatta]
gi|30173333|sp|Q8SQ27.1|RBM12_MACMU RecName: Full=RNA-binding protein 12; AltName: Full=RNA-binding
motif protein 12; AltName: Full=SH3/WW domain anchor
protein in the nucleus; Short=SWAN
gi|19070196|gb|AAL83753.1| SWAN [Macaca mulatta]
gi|355563178|gb|EHH19740.1| RNA-binding motif protein 12 [Macaca mulatta]
gi|355784534|gb|EHH65385.1| RNA-binding motif protein 12 [Macaca fascicularis]
gi|380808606|gb|AFE76178.1| RNA-binding protein 12 [Macaca mulatta]
gi|380808608|gb|AFE76179.1| RNA-binding protein 12 [Macaca mulatta]
gi|384944626|gb|AFI35918.1| RNA-binding protein 12 [Macaca mulatta]
gi|384944628|gb|AFI35919.1| RNA-binding protein 12 [Macaca mulatta]
Length = 932
Score = 68.9 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 55/217 (25%), Positives = 101/217 (46%), Gaps = 23/217 (10%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF + + LL D GR++G V+F S D AL+R++ M RY+E+
Sbjct: 323 FFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-------- 374
Query: 83 KEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQ 142
A R GG + +G S + + R+K + + +G
Sbjct: 375 SPATERQWVAAGGHITFKQNMGPSGQSHPPPQTLPRSKSPSGQKRSRSRSPHEAGF---- 430
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
C+ L+GLP+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL
Sbjct: 431 -CVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC 489
Query: 203 RHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDL 239
RHK+ +G+R + + P+T + + ++D+
Sbjct: 490 RHKQYMGNRFIQV----------HPITKKGMLEKIDM 516
Score = 64.3 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMMLNPEGDVNSA--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K+
Sbjct: 543 -KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 ERLHRKKLNGR 612
Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 858 IKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDL 917
Query: 205 KEK-IGHRLVTLVM 217
++ IG R V LV+
Sbjct: 918 NDRPIGSRKVKLVL 931
Score = 39.7 bits (91), Expect = 1.6, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++R
Sbjct: 5 IRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMMRT 60
Query: 205 KEKIGHRLVTLVMS 218
I VTL++S
Sbjct: 61 GGTIKGSKVTLLLS 74
>gi|431894345|gb|ELK04145.1| RNA-binding protein 12 [Pteropus alecto]
Length = 899
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 91/184 (49%), Gaps = 13/184 (7%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ LL D GR++G V+F S D AL+R++ M RY+E+ + + E G
Sbjct: 332 VHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-----SPATERQWVAAG 386
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
G K + +G + + + R+K + + +G C+ L+GLP
Sbjct: 387 GHITFKQS---IGPSGQTHPPPQTLPRSKSPSGQKRSRSRSPHEAG-----FCVYLKGLP 438
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL RHK+ +G+R
Sbjct: 439 FEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 212 LVTL 215
+ +
Sbjct: 499 FIQV 502
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 29/177 (16%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMILNPEGDVSS---- 541
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENA 197
+ C + +P+ K DV +FLEG+ + N + + D G+ G A + NA
Sbjct: 542 TKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALCRNAQCRNA 598
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 823 TVIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVI 882
Query: 203 RHKEK-IGHRLVTLVM 217
++ IG R V LV+
Sbjct: 883 DLNDRPIGSRKVKLVL 898
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++
Sbjct: 3 VVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMM 58
Query: 203 RHKEKIGHRLVTLVMS 218
R I VTL++S
Sbjct: 59 RTGGTIKGSKVTLLLS 74
>gi|148673702|gb|EDL05649.1| RNA binding motif protein 35A, isoform CRA_a [Mus musculus]
Length = 483
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 117 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 176
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 177 GEDFLKIAG-GTSN--------------EVAQFLSKE----------------------- 198
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 199 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 253
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HKE +G R + L S A
Sbjct: 254 CEEYAQNALRKHKELLGKRYIELFRSTA 281
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 109/256 (42%), Gaps = 47/256 (18%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 234 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKELLGKRYIELFRSTAAEVQQV------ 287
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 288 ----------------LNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNVRD--CIRLRGLP 328
Query: 152 YECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 329 YAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTM 388
Query: 209 GHRLVTLVMSGAQWF-------------LSPP---LTNETPISRLDLTGSPVRSTICVLC 252
R V + A+ LSPP L +P S + V T +
Sbjct: 389 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPTAVIPTEAAIY 448
Query: 253 HP---LTPRSVRPRSV 265
P L PR+++P +
Sbjct: 449 QPSLLLNPRALQPSTA 464
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 98 DSTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 157
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 158 LQRHKHHMGTRYIEVYKATGEDFL 181
>gi|417413254|gb|JAA52964.1| Putative rna binding protein rbm12/swan, partial [Desmodus
rotundus]
Length = 960
Score = 68.9 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 54/217 (24%), Positives = 103/217 (47%), Gaps = 23/217 (10%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF + + LL D GR++G V+F S D AL+R++ M RY+E+ + +
Sbjct: 345 FFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-----SPA 399
Query: 83 KEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQ 142
E GG K + +G + + + R+K + + +G
Sbjct: 400 TERQWVAAGGHITFKQS---IGPSGQTHPPPQTLPRSKSPSGQKRSRSRSPHEAGF---- 452
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
C+ L+GLP+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL
Sbjct: 453 -CVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC 511
Query: 203 RHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDL 239
RHK+ +G+R + + P+T + + ++D+
Sbjct: 512 RHKQYMGNRFIQV----------HPITKKGMLEKIDM 538
Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 471 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----P 526
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 527 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMMLNPEGDVSS---- 563
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K+
Sbjct: 564 TKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKS 623
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 624 ERLHRKKLNGR 634
Score = 40.0 bits (92), Expect = 1.4, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 886 IKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDL 945
Query: 205 KEK-IGHRLVTLVM 217
++ IG R V LV+
Sbjct: 946 NDRPIGSRKVKLVL 959
Score = 39.7 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++R
Sbjct: 27 IRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMMRT 82
Query: 205 KEKIGHRLVTLVMS 218
I VTL++S
Sbjct: 83 GGTIKGSKVTLLLS 96
>gi|345326895|ref|XP_001507064.2| PREDICTED: epithelial splicing regulatory protein 1, partial
[Ornithorhynchus anatinus]
Length = 605
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 90/208 (43%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG+RYIE+Y
Sbjct: 170 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGNRYIEVYKAT 229
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 230 GEDFLKIAG-GTSN--------------EVAQFLSKE----------------------- 251
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ ++V F + G +T P GR TG A++ F
Sbjct: 252 --NQVIVRMRGLPFTATADEVSAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 306
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 307 CEEYAQNALRKHKDLLGKRYIELFRSTA 334
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 20 CSQFFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIEL 74
S FF P+ IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL
Sbjct: 270 VSAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIEL 329
Query: 75 YMEEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAV 134
+ ++ +++F + + + L +Q V
Sbjct: 330 FRSTAAEVQQ----------------------VLNRFSSAPLIPLPTPPIIPVLPQQ-FV 366
Query: 135 LSGSAVDQCCMRLQGLPYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFV 192
+ D C+RL+GLPY ED+ +FL +I +G+ + ++ GR +G A+IQ
Sbjct: 367 PPTNVRD--CIRLRGLPYAATIEDILEFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMK 424
Query: 193 DKENAEKALLR-HKEKIGHRLVTLVMSGAQ 221
+ A A + HK+ + R V + A+
Sbjct: 425 SADRAFMAAQKCHKKTMKDRYVEVFQCSAE 454
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 151 DNTIVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 210
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G+R + + + + FL
Sbjct: 211 LQRHKHHMGNRYIEVYKATGEDFL 234
>gi|284520924|ref|NP_001165219.1| RNA-binding protein 12 [Canis lupus familiaris]
Length = 923
Score = 68.9 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 54/217 (24%), Positives = 103/217 (47%), Gaps = 23/217 (10%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF + + LL D GR++G V+F S D AL+R++ M RY+E+ + +
Sbjct: 323 FFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-----SPA 377
Query: 83 KEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQ 142
E GG K + +G + + + R+K + + +G
Sbjct: 378 TERQWVAAGGHITFKQS---IGPSGQTHPPPQTLPRSKSPSGQKRSRSRSPHEAGF---- 430
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
C+ L+GLP+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL
Sbjct: 431 -CVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC 489
Query: 203 RHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDL 239
RHK+ +G+R + + P+T + + ++D+
Sbjct: 490 RHKQYMGNRFIQV----------HPITKKGMLEKIDM 516
Score = 64.7 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMMLNPEGDVSSA--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K+
Sbjct: 543 -KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 ERLHRKKLNGR 612
Score = 40.0 bits (92), Expect = 1.4, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 849 IKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDL 908
Query: 205 KEK-IGHRLVTLVM 217
++ IG R V LV+
Sbjct: 909 NDRPIGSRKVKLVL 922
Score = 39.7 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++R
Sbjct: 5 IRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMMRT 60
Query: 205 KEKIGHRLVTLVMS 218
I VTL++S
Sbjct: 61 GGTIKGSKVTLLLS 74
>gi|301762096|ref|XP_002916483.1| PREDICTED: RNA-binding protein 12-like [Ailuropoda melanoleuca]
gi|281346062|gb|EFB21646.1| hypothetical protein PANDA_004540 [Ailuropoda melanoleuca]
Length = 923
Score = 68.9 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 54/217 (24%), Positives = 103/217 (47%), Gaps = 23/217 (10%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF + + LL D GR++G V+F S D AL+R++ M RY+E+ + +
Sbjct: 323 FFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-----SPA 377
Query: 83 KEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQ 142
E GG K + +G + + + R+K + + +G
Sbjct: 378 TERQWVAAGGHITFKQS---IGPSGQTHPPPQTLPRSKSPSGQKRSRSRSPHEAGF---- 430
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
C+ L+GLP+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL
Sbjct: 431 -CVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC 489
Query: 203 RHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDL 239
RHK+ +G+R + + P+T + + ++D+
Sbjct: 490 RHKQYMGNRFIQV----------HPITKKGMLEKIDM 516
Score = 64.7 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMMLNPEGDVSSA--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K+
Sbjct: 543 -KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 ERLHRKKLNGR 612
Score = 40.0 bits (92), Expect = 1.4, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 849 IKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDL 908
Query: 205 KEK-IGHRLVTLVM 217
++ IG R V LV+
Sbjct: 909 NDRPIGSRKVKLVL 922
Score = 39.7 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++R
Sbjct: 5 IRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMMRT 60
Query: 205 KEKIGHRLVTLVMS 218
I VTL++S
Sbjct: 61 GGTIKGSKVTLLLS 74
>gi|37747755|gb|AAH59280.1| Rbm35a protein, partial [Mus musculus]
Length = 490
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 124 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 183
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 184 GEDFLKIAG-GTSN--------------EVAQFLSKE----------------------- 205
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 206 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 260
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HKE +G R + L S A
Sbjct: 261 CEEYAQNALRKHKELLGKRYIELFRSTA 288
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 109/256 (42%), Gaps = 47/256 (18%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 241 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKELLGKRYIELFRSTAAEVQQV------ 294
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 295 ----------------LNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNVRD--CIRLRGLP 335
Query: 152 YECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 336 YAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTM 395
Query: 209 GHRLVTLVMSGAQWF-------------LSPP---LTNETPISRLDLTGSPVRSTICVLC 252
R V + A+ LSPP L +P S + V T +
Sbjct: 396 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPTAVIPTEAAIY 455
Query: 253 HP---LTPRSVRPRSV 265
P L PR+++P +
Sbjct: 456 QPSLLLNPRALQPSTA 471
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 105 DSTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 164
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 165 LQRHKHHMGTRYIEVYKATGEDFL 188
>gi|327276493|ref|XP_003223004.1| PREDICTED: epithelial splicing regulatory protein 2-like [Anolis
carolinensis]
Length = 714
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 92/214 (42%), Gaps = 63/214 (29%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I + L + GR +GEA V F + + AL+RHK +MG RYIE+Y
Sbjct: 246 ARFFKGLNIAKGGVALCLNAQGRRNGEALVRFVNSEQRDLALERHKHHMGSRYIEVYKAT 305
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 306 GEEFLKIAG-GTSNE--------------VAQFLSKE----------------------- 327
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFL----------EGLEIV--PNGITIPHDYAGRCTGV 186
+Q +R++GLP+ EDV FL EGL V P+ GR TG
Sbjct: 328 --NQVIIRMRGLPFTATPEDVLGFLGPECPVTGEKEGLLFVKYPD---------GRPTGD 376
Query: 187 AYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGA 220
A++ F +E A+ AL +HKE +G R + L S A
Sbjct: 377 AFVLFACEEFAQNALKKHKEILGKRYIELFRSTA 410
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 91/199 (45%), Gaps = 32/199 (16%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A V F+ + AQ AL++HK +G RYIEL+
Sbjct: 349 FLGPECPVTGEKEGLLFVKYPDGRPTGDAFVLFACEEFAQNALKKHKEILGKRYIELFRS 408
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ ++++++ + + + + + +G
Sbjct: 409 TAAEVQQV----------------------LNRYMSTPLIPTLPTPIIPVIPPPYTIAAG 446
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
SA D C+RL+GLPY +D+ +F+ +I P+G+ + + GR +G A+IQ +
Sbjct: 447 SARD--CVRLRGLPYTAGIDDILEFMGDATGDIKPHGVHMVLNQQGRLSGDAFIQMKSSD 504
Query: 196 NAEKALLR-HKEKIGHRLV 213
A + HK+ + R V
Sbjct: 505 RAYLVAQKCHKKMMKDRYV 523
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +D+ +F +GL I G+ + + GR G A ++FV+ E + AL
Sbjct: 228 ETVIRARGLPWQSSDQDIARFFKGLNIAKGGVALCLNAQGRRNGEALVRFVNSEQRDLAL 287
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + FL
Sbjct: 288 ERHKHHMGSRYIEVYKATGEEFL 310
>gi|281182775|ref|NP_001162483.1| RNA-binding protein 12 [Papio anubis]
gi|164623749|gb|ABY64675.1| RNA binding motif protein 12 (predicted) [Papio anubis]
Length = 1466
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 89/184 (48%), Gaps = 13/184 (7%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ LL D GR++G V+F S D AL+R++ M RY+E+ A R
Sbjct: 332 VHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV--------SPATERQWV 383
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
GG + +G S + + R+K + + +G C+ L+GLP
Sbjct: 384 AAGGHITFKQNMGPSGQSHPPPQTLPRSKSPSGQKRSRSRSPHEAG-----FCVYLKGLP 438
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL RHK+ +G+R
Sbjct: 439 FEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 212 LVTL 215
+ +
Sbjct: 499 FIQV 502
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMMLNPEGDVNSA--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K+
Sbjct: 543 -KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 ERLHRKKLNGR 612
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++
Sbjct: 3 VVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMM 58
Query: 203 RHKEKIGHRLVTLVMS 218
R I VTL++S
Sbjct: 59 RTGGTIKGSKVTLLLS 74
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 856 TVIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVI 915
Query: 203 RHKEK-IGHRLVTLV 216
++ IG R V L+
Sbjct: 916 DLNDRPIGSRKVKLM 930
>gi|284519716|ref|NP_001165217.1| RNA-binding protein 12 [Equus caballus]
Length = 928
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 54/217 (24%), Positives = 103/217 (47%), Gaps = 23/217 (10%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF + + LL D GR++G V+F S D AL+R++ M RY+E+ + +
Sbjct: 323 FFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-----SPA 377
Query: 83 KEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQ 142
E GG K + +G + + + R+K + + +G
Sbjct: 378 TERQWVAAGGHITFKQS---IGPSGQTHPPPQTLPRSKSPNGQKRSRSRSPHEAGF---- 430
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
C+ L+GLP+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL
Sbjct: 431 -CVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC 489
Query: 203 RHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDL 239
RHK+ +G+R + + P+T + + ++D+
Sbjct: 490 RHKQYMGNRFIQV----------HPITKKGMLEKIDM 516
Score = 63.9 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMMLNPEGDVSSA--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF +++A K+
Sbjct: 543 -KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDSNGQGLGQALVQFKSEDDARKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 ERLHRKKLNGR 612
Score = 40.0 bits (92), Expect = 1.4, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 854 IKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDL 913
Query: 205 KEK-IGHRLVTLVM 217
++ IG R V LV+
Sbjct: 914 NDRPIGSRKVKLVL 927
Score = 39.7 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++R
Sbjct: 5 IRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMMRT 60
Query: 205 KEKIGHRLVTLVMS 218
I VTL++S
Sbjct: 61 GGTIKGSKVTLLLS 74
>gi|52346028|ref|NP_001005057.1| epithelial splicing regulatory protein 1 [Xenopus (Silurana)
tropicalis]
gi|82182765|sp|Q6DEZ7.1|ESRP1_XENTR RecName: Full=Epithelial splicing regulatory protein 1; AltName:
Full=RNA-binding motif protein 35A; AltName:
Full=RNA-binding protein 35A
gi|49899931|gb|AAH76946.1| MGC89324 protein [Xenopus (Silurana) tropicalis]
Length = 687
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 90/208 (43%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG+RYIE+Y
Sbjct: 243 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGNRYIEVY--- 299
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
+A G G S ++QFL+K
Sbjct: 300 -----KATGEDFLKIAGGTSNE-------VAQFLSKE----------------------- 324
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F V G +T P + R TG A++ F
Sbjct: 325 --NQVIVRMRGLPFTATAEEVLAFFGQQCPVTGGKEGILFVTYPDN---RPTGDAFVLFA 379
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HKE +G R + L S A
Sbjct: 380 CEEYAQNALKKHKELLGKRYIELFRSTA 407
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 224 DNTIIRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 283
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G+R + + + + FL
Sbjct: 284 LQRHKHHMGNRYIEVYKATGEDFL 307
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 106/271 (39%), Gaps = 53/271 (19%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF PV IL +T R +G+A V F+ + AQ AL++HK +G RYIEL+
Sbjct: 346 FFGQQCPVTGGKEGILFVTYPDNRPTGDAFVLFACEEYAQNALKKHKELLGKRYIELFRS 405
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ R + TP + + F+ R
Sbjct: 406 TAAEVQQVLNRYSSAPLIPLPTPPIIPVL-PQPFIPPVNVRD------------------ 446
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
C+RL+GLPY ED+ +FL +I +G+ + ++ GR +G ++IQ +
Sbjct: 447 ------CIRLRGLPYAATIEDILEFLGEFSADIRTHGVHMVLNHQGRPSGDSFIQMKSAD 500
Query: 196 NAEKALLR-HKEKIGHRLVTLVMSGAQWF-------------LSPPLTN----ETPISRL 237
A A + HK+ + R V + A+ LSPP P
Sbjct: 501 RAYLAAQKCHKKTMKDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTF 560
Query: 238 DLTGSPVRSTICVLCHP---LTPRSVRPRSV 265
+ + + L P L PRS++P +
Sbjct: 561 PAQAAVIPTEAAALYQPSLLLNPRSLQPSAA 591
>gi|195442063|ref|XP_002068780.1| GK17961 [Drosophila willistoni]
gi|194164865|gb|EDW79766.1| GK17961 [Drosophila willistoni]
Length = 864
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 80/189 (42%), Gaps = 54/189 (28%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR +GEA + F S + AL+RHK ++G RYIE+Y G
Sbjct: 332 GRRNGEALIRFVSQEHRDMALKRHKHHIGARYIEVYRASG-------------------- 371
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
FLA + ++ A LS A Q +R++GLPY+C + V
Sbjct: 372 ---------EDFLAIAGGASNEAQ---------AFLSKGA--QVIIRMRGLPYDCTAKQV 411
Query: 160 EKF----------LEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIG 209
F L+G E G+ GR TG A++ F + +A KAL RH+E IG
Sbjct: 412 LDFFTTGDSPCSVLDGTE----GVLFVKKPDGRATGDAFVLFALEADAPKALGRHRESIG 467
Query: 210 HRLVTLVMS 218
R + L S
Sbjct: 468 QRYIELFRS 476
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
C +R +GLP++ +D+ KF GL + G+ + GR G A I+FV +E+ + AL
Sbjct: 293 NCIVRARGLPWQSSDQDIAKFFCGLNVAKGGVALCLSPLGRRNGEALIRFVSQEHRDMAL 352
Query: 202 LRHKEKIGHRLVTLVMSGAQWFLS 225
RHK IG R + + + + FL+
Sbjct: 353 KRHKHHIGARYIEVYRASGEDFLA 376
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 16/189 (8%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRG-- 89
+L + GR++G+A V F+ DA +AL RH+ ++G RYIEL+ ++ R
Sbjct: 431 VLFVKKPDGRATGDAFVLFALEADAPKALGRHRESIGQRYIELFRSTTAEVQQVLNRSMD 490
Query: 90 --TGGFGGVKSTPYGVGIFCISQF-------LAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
T S P + Q + + Q + SG+
Sbjct: 491 PKTYEANNSHSQPPLIAQLPQMQLPLLPQVGAIAIAGHGHANPLCPIPPPQHLITSGTIK 550
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENAE 198
+ C+RL+GLPYE E + FL+ I+ G+ + + G+ +G A+IQ +D E++
Sbjct: 551 N--CIRLRGLPYEAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQ-MDSEDSA 607
Query: 199 KALLRHKEK 207
+ + K
Sbjct: 608 RLCAQRKHN 616
>gi|148223399|ref|NP_001079524.1| epithelial splicing regulatory protein 1 [Xenopus laevis]
gi|82241595|sp|Q7ZY29.1|ESRP1_XENLA RecName: Full=Epithelial splicing regulatory protein 1; AltName:
Full=RNA-binding motif protein 35A; AltName:
Full=RNA-binding protein 35A
gi|27694832|gb|AAH44002.1| MGC53361 protein [Xenopus laevis]
Length = 688
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 90/208 (43%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG+RYIE+Y
Sbjct: 243 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGNRYIEVY--- 299
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
+A G G S ++QFL+K
Sbjct: 300 -----KATGEDFLKIAGGTSNE-------VAQFLSKE----------------------- 324
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F V G +T P + R TG A++ F
Sbjct: 325 --NQVIVRMRGLPFTATAEEVLAFFGQQCPVTGGKEGILFVTYPDN---RPTGDAFVLFA 379
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HKE +G R + L S A
Sbjct: 380 CEEYAQNALKKHKELLGKRYIELFRSTA 407
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 224 DNTIIRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 283
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G+R + + + + FL
Sbjct: 284 LQRHKHHMGNRYIEVYKATGEDFL 307
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 106/271 (39%), Gaps = 53/271 (19%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF PV IL +T R +G+A V F+ + AQ AL++HK +G RYIEL+
Sbjct: 346 FFGQQCPVTGGKEGILFVTYPDNRPTGDAFVLFACEEYAQNALKKHKELLGKRYIELFRS 405
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ R + TP + + F+ R
Sbjct: 406 TAAEVQQVLNRYSSAPLIPLPTPPIIPVL-PQPFIPPVNVRD------------------ 446
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
C+RL+GLPY ED+ +FL +I +G+ + ++ GR +G ++IQ +
Sbjct: 447 ------CIRLRGLPYAATIEDILEFLGEFSADIRTHGVHMVLNHQGRPSGDSFIQMKSAD 500
Query: 196 NAEKALLR-HKEKIGHRLVTLVMSGAQWF-------------LSPPLTN----ETPISRL 237
A A + HK+ + R V + A+ LSPP P
Sbjct: 501 RAYLAAQKCHKKTMKDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTF 560
Query: 238 DLTGSPVRSTICVLCHP---LTPRSVRPRSV 265
+ + + L P L PRS++P +
Sbjct: 561 PAQAAVIPTEAAALYQPSLLLNPRSLQPSAA 591
>gi|307196545|gb|EFN78075.1| RNA-binding protein 35A [Harpegnathos saltator]
Length = 760
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 85/193 (44%), Gaps = 46/193 (23%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ L GR +GEA V F + + AL+RHK +MG RYIE+Y +A+G
Sbjct: 219 VALCLSPMGRRNGEALVRFINKEHRDMALKRHKHHMGARYIEVY--------KASGEDFV 270
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
G G S E L R V+ +R++GLP
Sbjct: 271 GVAGGTS-----------------------GEAHAFLSRGAEVI---------VRMRGLP 298
Query: 152 YEC-KKEDVEKFLEGLEIV-----PNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHK 205
Y+C K+ +E FL G + +G+ GR TG A++ F +E+A KAL +H+
Sbjct: 299 YDCVAKQVLEFFLSGQKPCHVLDGEDGVLFVKKPDGRATGDAFVLFAKEEDAVKALSKHR 358
Query: 206 EKIGHRLVTLVMS 218
+ IG R + L S
Sbjct: 359 DCIGSRYIELFRS 371
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 48/84 (57%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C +R +GLP++ +D+ KF GL + G+ + GR G A ++F++KE+ + A
Sbjct: 187 NDCVVRARGLPWQSSDQDIAKFFRGLNVAKGGVALCLSPMGRRNGEALVRFINKEHRDMA 246
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + F+
Sbjct: 247 LKRHKHHMGARYIEVYKASGEDFV 270
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+L + GR++G+A V F+ +DA +AL +H+ +G RYIEL+ ++ R
Sbjct: 326 VLFVKKPDGRATGDAFVLFAKEEDAVKALSKHRDCIGSRYIELFRSTTAEVQQVLNRAID 385
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
V+ P V + I Q + G+ D C+RL+GLP
Sbjct: 386 PKQVVQPPPRIVQLPSIIP--------------------QHIITCGTRKD--CVRLRGLP 423
Query: 152 YECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENA 197
YE E + +F+ IV G+ + ++ G+ +G A+IQ + +A
Sbjct: 424 YEAVVEHILEFMGEHSKNIVFQGVHMVYNAQGQPSGEAFIQMDSEASA 471
>gi|296088657|emb|CBI37648.3| unnamed protein product [Vitis vinifera]
Length = 258
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 85/197 (43%), Gaps = 43/197 (21%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF + V++LL+ + +GR SGEA V F+ A ALQR + NMG RY+E++
Sbjct: 76 KFFAGLDIVDVLLV-NKSGRFSGEAYVVFAGSMQADFALQRDRQNMGRRYVEVFR----- 129
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
C Q + + S+ D +
Sbjct: 130 -------------------------CKKQDYYHAVASERFSDKDQMEHTE---------- 154
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
++L+GLP+ KK + +F E+ + + I G+ TG AY++F E A+KA+
Sbjct: 155 --ILKLRGLPFSVKKSQILEFFGDFELGDDKVHIACRPDGKATGEAYVEFASAEEAKKAM 212
Query: 202 LRHKEKIGHRLVTLVMS 218
+ K IG R V L S
Sbjct: 213 GKDKMTIGSRYVELFPS 229
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RL+GLP+ C D+ KF GL+IV + + +GR +G AY+ F A+ AL R
Sbjct: 60 VRLRGLPFNCTDIDIFKFFAGLDIVD---VLLVNKSGRFSGEAYVVFAGSMQADFALQRD 116
Query: 205 KEKIGHRLVTL 215
++ +G R V +
Sbjct: 117 RQNMGRRYVEV 127
>gi|410912184|ref|XP_003969570.1| PREDICTED: epithelial splicing regulatory protein 2-like [Takifugu
rubripes]
Length = 740
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 101/232 (43%), Gaps = 58/232 (25%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I + L + GR +GEA V F + + AL+RHK +MG+RYIE+Y
Sbjct: 241 ARFFKGLTIAKGGVALCLNAQGRRNGEALVRFINPEHRDLALERHKHHMGNRYIEVYKAT 300
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 301 GEEFLKIAG-GTSNE--------------VTQFLSKE----------------------- 322
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ ++V F+ V +G + P GR TG A++ F
Sbjct: 323 --NQVIIRMRGLPFTATPQEVLSFIGPESPVTDGAEGLLFVKYPD---GRPTGDAFVLFS 377
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA-------QWFLSPPLTNETPISRL 237
+E A+ AL +HK+ +G R + L S A ++S PL + P S +
Sbjct: 378 CEEYAQNALKKHKQILGKRYIELFRSTAAEVQQVLNRYMSTPLISTLPPSPI 429
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 34/202 (16%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A V FS + AQ AL++HK +G RYIEL+
Sbjct: 344 FIGPESPVTDGAEGLLFVKYPDGRPTGDAFVLFSCEEYAQNALKKHKQILGKRYIELFRS 403
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ R STP IS + + ++ L
Sbjct: 404 TAAEVQQVLNR-------YMSTPL------ISTLPPSPI-------VPVSVLTTPPFLPT 443
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
++ + C+RL+GLPY ED+ +F+ ++I P+G+ + + GR +G A+IQ +
Sbjct: 444 ASTTRDCVRLRGLPYTAGIEDILEFMGEHTVDIKPHGVHMVLNQQGRPSGDAFIQL---K 500
Query: 196 NAEKALLR----HKEKIGHRLV 213
+ +KA L HK+ + R V
Sbjct: 501 SPDKAFLVAQKCHKKTMKDRYV 522
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 50/84 (59%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
++ +R +GLP++ +D+ +F +GL I G+ + + GR G A ++F++ E+ + A
Sbjct: 222 NETVIRARGLPWQSSDQDIARFFKGLTIAKGGVALCLNAQGRRNGEALVRFINPEHRDLA 281
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G+R + + + + FL
Sbjct: 282 LERHKHHMGNRYIEVYKATGEEFL 305
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 39/57 (68%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+R+QGLPY +D+ F +G ++ P+ + I ++++G+C+G A I F +E A++A+
Sbjct: 665 VRMQGLPYNTGVKDILSFFQGYQLQPDAVLILYNFSGQCSGEALITFPSEEMAKQAV 721
>gi|344279913|ref|XP_003411730.1| PREDICTED: RNA-binding protein 12-like isoform 2 [Loxodonta
africana]
Length = 924
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 54/217 (24%), Positives = 103/217 (47%), Gaps = 23/217 (10%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF + + LL D GR++G V+F S D AL+R++ M RY+E+ + +
Sbjct: 323 FFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-----SPA 377
Query: 83 KEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQ 142
E GG K + +G + + + R+K + + +G
Sbjct: 378 TERQWVAAGGHITFKQS---LGPSGQAHPPPQTLPRSKSPSGQKRSRSRSPQEAGF---- 430
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
C+ L+GLP+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL
Sbjct: 431 -CVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC 489
Query: 203 RHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDL 239
RHK+ +G+R + + P+T + + ++D+
Sbjct: 490 RHKQYMGNRFIQV----------HPITKKGMLEKIDM 516
Score = 64.7 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMMLNPEGDVSSA--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K+
Sbjct: 543 -KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 ERLHRKKLNGR 612
Score = 39.7 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++R
Sbjct: 5 IRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMMRT 60
Query: 205 KEKIGHRLVTLVMS 218
I VTL++S
Sbjct: 61 GGTIKGSKVTLLLS 74
Score = 39.7 bits (91), Expect = 1.9, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 850 IKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDL 909
Query: 205 KEK-IGHRLVTLVM 217
++ IG R V L++
Sbjct: 910 NDRPIGSRKVKLIL 923
>gi|10177116|dbj|BAB10406.1| unnamed protein product [Arabidopsis thaliana]
Length = 248
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 94/195 (48%), Gaps = 24/195 (12%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF + V++LL++ + G+ SGEA V F+ + ALQR + NMG RY+E++
Sbjct: 60 EFFAGLNIVDVLLVSKN-GKFSGEAFVVFAGPMQVEIALQRDRHNMGRRYVEVFRCSKQD 118
Query: 82 SKEANGRGTGGFG-GVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
A G + V+++P G ++ R +++ ++++
Sbjct: 119 YYNAVAAEEGAYEYEVRASPPPTG-------PSRAKRFSEKEKLEYTE------------ 159
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
++++GLPY K + +F G +++ + + G+ TG A+++F E A +A
Sbjct: 160 ---VLKMRGLPYSVNKPQIIEFFSGYKVIQGRVQVVCRPDGKATGEAFVEFETGEEARRA 216
Query: 201 LLRHKEKIGHRLVTL 215
+ + K IG R V L
Sbjct: 217 MAKDKMSIGSRYVEL 231
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP+ C D+ +F GL IV + + + + G+ +G A++ F E AL R
Sbjct: 43 VVRLRGLPFNCADIDIFEFFAGLNIV-DVLLVSKN--GKFSGEAFVVFAGPMQVEIALQR 99
Query: 204 HKEKIGHRLVTLVMSGAQWFLS 225
+ +G R V + Q + +
Sbjct: 100 DRHNMGRRYVEVFRCSKQDYYN 121
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 29/36 (80%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
G+++GEA VEF + ++A+RA+ + K ++G RY+EL+
Sbjct: 197 GKATGEAFVEFETGEEARRAMAKDKMSIGSRYVELF 232
>gi|37360080|dbj|BAC98018.1| mKIAA0765 protein [Mus musculus]
Length = 569
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 94/194 (48%), Gaps = 13/194 (6%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF + + LL D GR++G V+F S D AL+R++ M RY+E+ +
Sbjct: 233 EFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-----SP 287
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
+ E GG K + +G + + + R+K + + +G
Sbjct: 288 ATERQWVAAGGHITFKQS---MGPSGQAHPPPQTLPRSKSPSGQKRSRSRSPHEAG---- 340
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
C+ L+GLP+E + + V F + L+IV + I I + G+ TG +++F + + + AL
Sbjct: 341 -FCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNDADYKAAL 399
Query: 202 LRHKEKIGHRLVTL 215
RHK+ +G+R + +
Sbjct: 400 CRHKQYMGNRFIQV 413
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 360 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVH----P 415
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 416 ITKK-------------------GMLEKIDMIRKRLQNFSYDQRELVLNPEGEVSSA--- 453
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF +++A K+
Sbjct: 454 -KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKTEDDAHKS 512
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 513 EHLHRKKLNGR 523
>gi|426241394|ref|XP_004014576.1| PREDICTED: RNA-binding protein 12 isoform 1 [Ovis aries]
Length = 931
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 54/217 (24%), Positives = 103/217 (47%), Gaps = 23/217 (10%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF + + LL D GR++G V+F S D AL+R++ M RY+E+ + +
Sbjct: 323 FFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-----SPA 377
Query: 83 KEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQ 142
E GG K + +G + + + R+K + + +G
Sbjct: 378 TERQWVAAGGHITFKQS---IGPSGQTHPPPQPLPRSKSPSGQKRSRSRSPHEAGF---- 430
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
C+ L+GLP+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL
Sbjct: 431 -CVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC 489
Query: 203 RHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDL 239
RHK+ +G+R + + P+T + + ++D+
Sbjct: 490 RHKQYMGNRFIQV----------HPITKKGMLEKIDM 516
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMILNPEGDVTSA--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K+
Sbjct: 543 -KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 ERLHRKKLNGR 612
Score = 40.0 bits (92), Expect = 1.4, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 857 IKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDL 916
Query: 205 KEK-IGHRLVTLVM 217
++ IG R V LV+
Sbjct: 917 NDRPIGSRKVKLVL 930
Score = 39.7 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++R
Sbjct: 5 IRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMMRT 60
Query: 205 KEKIGHRLVTLVMS 218
I VTL++S
Sbjct: 61 GGTIKGSKVTLLLS 74
>gi|348572536|ref|XP_003472048.1| PREDICTED: epithelial splicing regulatory protein 2 [Cavia
porcellus]
Length = 719
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 88/202 (43%), Gaps = 35/202 (17%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIEL+
Sbjct: 369 FLGPECPVTGGADGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRS 428
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ R + S L A + + L +G
Sbjct: 429 TAAEVQQVLNR-----------------YASSPLLPSLT--APLLPIPFPLA------AG 463
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ D C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ E
Sbjct: 464 TGRD--CVRLRGLPYTATIEDILSFLGEAAADIQPHGVHMVLNQQGRLSGDAFIQMTSAE 521
Query: 196 NAEKALLR-HKEKIGHRLVTLV 216
A A R HK+ + R V +V
Sbjct: 522 RALAAAQRCHKKMMKERYVEVV 543
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 82/194 (42%), Gaps = 45/194 (23%)
Query: 31 NILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGT 90
+ L + GR +GEA + F+ + ALQRHK +MG RYIE+Y G + G GT
Sbjct: 278 GVALCLNAQGRRNGEALIRFTDREQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAG-GT 336
Query: 91 GGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGL 150
+++FL++ DQ +RL+GL
Sbjct: 337 S--------------LEVARFLSRE-------------------------DQVILRLRGL 357
Query: 151 PYECKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKE 206
P+ DV FL G E +G+ GR TG A+ F +E A+ AL RHK
Sbjct: 358 PFSAGPTDVLSFL-GPECPVTGGADGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKG 416
Query: 207 KIGHRLVTLVMSGA 220
+G R + L S A
Sbjct: 417 MLGKRYIELFRSTA 430
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +DV +F GL I G+ + + GR G A I+F D+E + AL
Sbjct: 248 ETVVRARGLPWQSSDQDVARFFRGLNIARGGVALCLNAQGRRNGEALIRFTDREQRDLAL 307
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + F+
Sbjct: 308 QRHKHHMGVRYIEVYKATGEEFV 330
>gi|344279911|ref|XP_003411729.1| PREDICTED: RNA-binding protein 12-like isoform 1 [Loxodonta
africana]
Length = 936
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 54/217 (24%), Positives = 103/217 (47%), Gaps = 23/217 (10%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF + + LL D GR++G V+F S D AL+R++ M RY+E+ + +
Sbjct: 323 FFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-----SPA 377
Query: 83 KEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQ 142
E GG K + +G + + + R+K + + +G
Sbjct: 378 TERQWVAAGGHITFKQS---LGPSGQAHPPPQTLPRSKSPSGQKRSRSRSPQEAGF---- 430
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
C+ L+GLP+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL
Sbjct: 431 -CVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC 489
Query: 203 RHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDL 239
RHK+ +G+R + + P+T + + ++D+
Sbjct: 490 RHKQYMGNRFIQV----------HPITKKGMLEKIDM 516
Score = 64.7 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMMLNPEGDVSSA--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K+
Sbjct: 543 -KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 ERLHRKKLNGR 612
Score = 39.7 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++R
Sbjct: 5 IRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMMRT 60
Query: 205 KEKIGHRLVTLVMS 218
I VTL++S
Sbjct: 61 GGTIKGSKVTLLLS 74
Score = 39.3 bits (90), Expect = 2.0, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 862 IKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDL 921
Query: 205 KEK-IGHRLVTLVM 217
++ IG R V L++
Sbjct: 922 NDRPIGSRKVKLIL 935
>gi|312032395|ref|NP_001185821.1| RNA-binding protein 12 [Bos taurus]
Length = 953
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 54/217 (24%), Positives = 103/217 (47%), Gaps = 23/217 (10%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF + + LL D GR++G V+F S D AL+R++ M RY+E+ + +
Sbjct: 323 FFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-----SPA 377
Query: 83 KEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQ 142
E GG K + +G + + + R+K + + +G
Sbjct: 378 TERQWVAAGGHITFKQS---IGPSGQTHPPPQPLPRSKSPSGQKRSRSRSPHEAGF---- 430
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
C+ L+GLP+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL
Sbjct: 431 -CVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC 489
Query: 203 RHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDL 239
RHK+ +G+R + + P+T + + ++D+
Sbjct: 490 RHKQYMGNRFIQV----------HPITKKGMLEKIDM 516
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMILNPEGDVTSA--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K+
Sbjct: 543 -KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 ERLHRKKLNGR 612
Score = 40.0 bits (92), Expect = 1.4, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 879 IKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDL 938
Query: 205 KEK-IGHRLVTLVM 217
++ IG R V LV+
Sbjct: 939 NDRPIGSRKVKLVL 952
Score = 39.7 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++R
Sbjct: 5 IRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMMRT 60
Query: 205 KEKIGHRLVTLVMS 218
I VTL++S
Sbjct: 61 GGTIKGSKVTLLLS 74
>gi|148673703|gb|EDL05650.1| RNA binding motif protein 35A, isoform CRA_b [Mus musculus]
Length = 604
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVY--- 298
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
+A G G S ++QFL+K
Sbjct: 299 -----KATGEDFLKIAGGTSNE-------VAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HKE +G R + L S A
Sbjct: 379 CEEYAQNALRKHKELLGKRYIELFRSTA 406
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 28/193 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++ R +
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKELLGKRYIELFRSTAAEVQQVLNRFSS 418
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
TP + + QF+ R C+RL+GLP
Sbjct: 419 APLIPLPTPPIIPVLP-QQFVPPTNVRD------------------------CIRLRGLP 453
Query: 152 YECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTM 513
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 514 KDRYVEVFQCSAE 526
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DSTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGTRYIEVYKATGEDFL 306
>gi|426241396|ref|XP_004014577.1| PREDICTED: RNA-binding protein 12 isoform 2 [Ovis aries]
Length = 926
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 54/217 (24%), Positives = 103/217 (47%), Gaps = 23/217 (10%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF + + LL D GR++G V+F S D AL+R++ M RY+E+ + +
Sbjct: 323 FFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-----SPA 377
Query: 83 KEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQ 142
E GG K + +G + + + R+K + + +G
Sbjct: 378 TERQWVAAGGHITFKQS---IGPSGQTHPPPQPLPRSKSPSGQKRSRSRSPHEAGF---- 430
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
C+ L+GLP+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL
Sbjct: 431 -CVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC 489
Query: 203 RHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDL 239
RHK+ +G+R + + P+T + + ++D+
Sbjct: 490 RHKQYMGNRFIQV----------HPITKKGMLEKIDM 516
Score = 64.7 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMILNPEGDVTSA--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K+
Sbjct: 543 -KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 ERLHRKKLNGR 612
Score = 40.0 bits (92), Expect = 1.4, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 852 IKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDL 911
Query: 205 KEK-IGHRLVTLVM 217
++ IG R V LV+
Sbjct: 912 NDRPIGSRKVKLVL 925
Score = 39.7 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++R
Sbjct: 5 IRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMMRT 60
Query: 205 KEKIGHRLVTLVMS 218
I VTL++S
Sbjct: 61 GGTIKGSKVTLLLS 74
>gi|145359708|ref|NP_201402.3| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332010757|gb|AED98140.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 255
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 94/195 (48%), Gaps = 24/195 (12%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF + V++LL++ + G+ SGEA V F+ + ALQR + NMG RY+E++
Sbjct: 67 EFFAGLNIVDVLLVSKN-GKFSGEAFVVFAGPMQVEIALQRDRHNMGRRYVEVFRCSKQD 125
Query: 82 SKEANGRGTGGFG-GVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
A G + V+++P G ++ R +++ ++++
Sbjct: 126 YYNAVAAEEGAYEYEVRASPPPTG-------PSRAKRFSEKEKLEYTE------------ 166
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
++++GLPY K + +F G +++ + + G+ TG A+++F E A +A
Sbjct: 167 ---VLKMRGLPYSVNKPQIIEFFSGYKVIQGRVQVVCRPDGKATGEAFVEFETGEEARRA 223
Query: 201 LLRHKEKIGHRLVTL 215
+ + K IG R V L
Sbjct: 224 MAKDKMSIGSRYVEL 238
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP+ C D+ +F GL IV + + + + G+ +G A++ F E AL R
Sbjct: 50 VVRLRGLPFNCADIDIFEFFAGLNIV-DVLLVSKN--GKFSGEAFVVFAGPMQVEIALQR 106
Query: 204 HKEKIGHRLVTLVMSGAQWFLS 225
+ +G R V + Q + +
Sbjct: 107 DRHNMGRRYVEVFRCSKQDYYN 128
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 29/36 (80%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
G+++GEA VEF + ++A+RA+ + K ++G RY+EL+
Sbjct: 204 GKATGEAFVEFETGEEARRAMAKDKMSIGSRYVELF 239
>gi|403281161|ref|XP_003932066.1| PREDICTED: RNA-binding protein 12 [Saimiri boliviensis boliviensis]
Length = 1465
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 89/184 (48%), Gaps = 13/184 (7%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ LL D GR++G V+F S D AL+R++ M RY+E+ A R
Sbjct: 332 VHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV--------SPATERQWV 383
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
GG + +G + + + R+K + + +G C+ L+GLP
Sbjct: 384 AAGGHITFKQNMGPSGPAHPPPQTLPRSKSPSGQKRSRSRSPHEAG-----FCVYLKGLP 438
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL RHK+ +G+R
Sbjct: 439 FEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 212 LVTL 215
+ +
Sbjct: 499 FIQV 502
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMILNPEGDVNSA--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K+
Sbjct: 543 -KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 ERLHRKKLNGR 612
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++
Sbjct: 3 VVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMM 58
Query: 203 RHKEKIGHRLVTLVMS 218
R I VTL++S
Sbjct: 59 RTGGTIKGSKVTLLLS 74
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 855 TVIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVI 914
Query: 203 RHKEK-IGHRLVTLV 216
++ IG R V L+
Sbjct: 915 DLNDRPIGSRKVKLM 929
>gi|348564119|ref|XP_003467853.1| PREDICTED: RNA-binding protein 12-like [Cavia porcellus]
Length = 1467
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 89/184 (48%), Gaps = 13/184 (7%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ LL D GR++G V+F S D AL+R++ M RY+E+ A R
Sbjct: 332 VHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV--------GPATERQWV 383
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
GG + +G + + + R+K + + +G C+ L+GLP
Sbjct: 384 AAGGHITFKQSIGPSGQTHPPPQTLPRSKSPSGQKRSRSRSPHEAG-----FCVYLKGLP 438
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL RHK+ +G+R
Sbjct: 439 FEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 212 LVTL 215
+ +
Sbjct: 499 FIQV 502
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDTIRKRLQNFSYDQREMILNPEGDVNSA--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K+
Sbjct: 543 -KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 EHLHRKKLNGR 612
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++
Sbjct: 3 VVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMM 58
Query: 203 RHKEKIGHRLVTLVMS 218
R I VTL++S
Sbjct: 59 RTGGTIKGSKVTLLLS 74
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 857 TVIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVI 916
Query: 203 RHKEK-IGHRLVTLV 216
++ IG R V L+
Sbjct: 917 DLNDRPIGSRKVKLM 931
>gi|332248945|ref|XP_003273625.1| PREDICTED: RNA-binding protein 12-like isoform 3 [Nomascus
leucogenys]
Length = 1466
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 13/184 (7%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ LL D GR++G V+F S D AL+R++ M RY+E+ + + E G
Sbjct: 332 VHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-----SPATERQWVAAG 386
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
G K +G + + + R+K + + +G C+ L+GLP
Sbjct: 387 GHITFKQN---MGPSGQTHPPPQTLPRSKSPSGQKRSRSRSPHEAG-----FCVYLKGLP 438
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL RHK+ +G+R
Sbjct: 439 FEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 212 LVTL 215
+ +
Sbjct: 499 FIQV 502
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMILNPEGDVNSA--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K+
Sbjct: 543 -KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 ERLHRKKLNGR 612
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++
Sbjct: 3 VVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMM 58
Query: 203 RHKEKIGHRLVTLVMS 218
R I VTL++S
Sbjct: 59 RTGGTIKGSKVTLLLS 74
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 856 TVIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVI 915
Query: 203 RHKEK-IGHRLVTLV 216
++ IG R V L+
Sbjct: 916 DLNDRPIGSRKVKLM 930
>gi|422294428|gb|EKU21728.1| rna binding protein, partial [Nannochloropsis gaditana CCMP526]
Length = 572
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 20/196 (10%)
Query: 25 KPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKE 84
+P +I +L D SSGEA V S ++ + AL+ +G R++++ G++++E
Sbjct: 117 RPDPAADIKILDD----SSGEALVRVGSAEEEETALKLKVGRLGKRFVDI----GSTTEE 168
Query: 85 ANGRGTGGFGGVKSTPYGV--GIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQ 142
A ++TP + + + + A + + S+ Q
Sbjct: 169 A----------FEATPATSEEAMNAPATVVPDAATATGEAGDGTAGEASSLTVPESSTPQ 218
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+R++GLPY ++D+ F G + G+ + +D+ GR +G AY+ F A+ AL
Sbjct: 219 GVVRMRGLPYSATEKDILAFFSGFGVAEGGVHMHYDHMGRASGQAYVVFETVPEAQHALK 278
Query: 203 RHKEKIGHRLVTLVMS 218
KEKIG R + L +S
Sbjct: 279 LDKEKIGERWIDLFLS 294
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 113/268 (42%), Gaps = 48/268 (17%)
Query: 37 DDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGV 96
D GR+SG+A V F +V +AQ AL+ K +G+R+I+L++ A+ + G
Sbjct: 254 DHMGRASGQAYVVFETVPEAQHALKLDKEKIGERWIDLFLSSKPEMLHAHFFASVG---- 309
Query: 97 KSTPYGVGIFCISQ---------FLAKWMRRAKRSEMDWALKRQG--------------- 132
P GIF + + F+ + A R + ++ G
Sbjct: 310 ---PTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELF 366
Query: 133 ------AVLSGSAVD---QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC 183
AV G+ D ++++GLP++ DV + + P+G+ I GR
Sbjct: 367 SRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRP 426
Query: 184 TGVAYIQFVDKENAEKAL-LRHKEKIGHRLVTLVM-SGAQWFLSPPLTNETPISRLDLTG 241
TG AY+ F E+A A +K+ + +R + L + S + S T +PI G
Sbjct: 427 TGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTS---TVHSPIVGQAHGG 483
Query: 242 SPVRSTICVLCHPLTPRSVRPRSVRQSE 269
PV + + C L R V P +V + E
Sbjct: 484 CPVYANTPMTCARL--RGV-PSTVTEEE 508
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 78/187 (41%), Gaps = 50/187 (26%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELYMEE------G 79
+ P + + GR +GEA V F + +DA A + +K M +R+I+LY+
Sbjct: 411 VAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTS 470
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA 139
T G+ GG +TP
Sbjct: 471 TVHSPIVGQAHGGCPVYANTP--------------------------------------- 491
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
C RL+G+P +E++ +F GL+++ G+ I D +GR TG AY +F ++ ++
Sbjct: 492 --MTCARLRGVPSTVTEEELFRFFAGLQVI--GLYICRDSSGRATGEAYAEFGSLDDCQQ 547
Query: 200 ALLRHKE 206
A+ R+++
Sbjct: 548 AMSRNRD 554
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 5/58 (8%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNM-----GDRYIEL 74
+FF + + + + D +GR++GEA EF S+DD Q+A+ R++ M GDR IE+
Sbjct: 511 RFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEV 568
>gi|113951757|ref|NP_001039317.1| G-rich sequence factor 1 [Danio rerio]
gi|112418830|gb|AAI22227.1| Zgc:153305 [Danio rerio]
gi|182890996|gb|AAI64250.1| Zgc:153305 protein [Danio rerio]
Length = 301
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 46/184 (25%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ +L + G+ SG+A +E +D +AL +H+ DR IE+ ++K+A
Sbjct: 69 VHILYNKYGKPSGQAFIELEHEEDVGKALDQHRHYPRDRLIEV---REVTNKDAEA---- 121
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
I S+ +R E D +RL+GLP
Sbjct: 122 -------------ILKASK---------ERVETD-----------------TVVRLRGLP 142
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
Y C + D+ +F GL++V +G+TI + G+ +G A+++F K AEKAL + +E +G+R
Sbjct: 143 YSCTEGDIIRFFSGLDVVEDGVTIILNRRGKSSGDAFVEFATKAMAEKALKKDREILGNR 202
Query: 212 LVTL 215
+ +
Sbjct: 203 YIEI 206
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 83/175 (47%), Gaps = 33/175 (18%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEAN 86
+V + ++ + G+SSG+A VEF++ A++AL++ + +G+RYIE+
Sbjct: 159 VVEDGVTIILNRRGKSSGDAFVEFATKAMAEKALKKDREILGNRYIEI------------ 206
Query: 87 GRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMR 146
F +KS SQ R+ +++ + + + L +AV + +
Sbjct: 207 ------FPAMKSA-------IPSQ------NRSWQNDRVFTPRAEDPPLRNTAVTKNVIH 247
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
++GLP++ K ED+ KF + ++ + + G+ TG A F E+A A+
Sbjct: 248 MRGLPFDAKAEDIVKFFAPVRLM--KVVVEFGPEGKPTGEAEAYFKTHEDAVLAM 300
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVP--NGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
++ +GLP+ C ED+ F I NG+ I ++ G+ +G A+I+ +E+ KAL
Sbjct: 39 VQAKGLPWSCTAEDIMSFFSECRIRGGVNGVHILYNKYGKPSGQAFIELEHEEDVGKALD 98
Query: 203 RHKEKIGHRLVTL 215
+H+ RL+ +
Sbjct: 99 QHRHYPRDRLIEV 111
>gi|165972311|ref|NP_918944.2| epithelial splicing regulatory protein 1 [Mus musculus]
Length = 681
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 301
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 302 GEDFLKIAG-GTSNE--------------VAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HKE +G R + L S A
Sbjct: 379 CEEYAQNALRKHKELLGKRYIELFRSTA 406
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 109/256 (42%), Gaps = 47/256 (18%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKELLGKRYIELFRSTAAEVQQV------ 412
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 413 ----------------LNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNVRD--CIRLRGLP 453
Query: 152 YECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTM 513
Query: 209 GHRLVTLVMSGAQWF-------------LSPP---LTNETPISRLDLTGSPVRSTICVLC 252
R V + A+ LSPP L +P S + V T +
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPTAVIPTEAAIY 573
Query: 253 HP---LTPRSVRPRSV 265
P L PR+++P +
Sbjct: 574 QPSLLLNPRALQPSTA 589
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DSTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGTRYIEVYKATGEDFL 306
>gi|301632397|ref|XP_002945272.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H-like, partial
[Xenopus (Silurana) tropicalis]
Length = 218
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 38/53 (71%)
Query: 166 LEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
L IVPNGIT+ DY GR TG A++QF KE AE AL +HKE+IGHR + + S
Sbjct: 1 LRIVPNGITLTVDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFKS 53
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
IVP I L D GRS+GEA V+F+S + A+ AL +HK +G RYIE++
Sbjct: 3 IVPNGITLTVDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIF 51
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 32/48 (66%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNM 67
+ FF P+ P+ + + GR++GEADVEF++ +DA A+ + K+NM
Sbjct: 171 IANFFSPLTPIRVHIDVGADGRATGEADVEFATHEDAVAAMSKDKNNM 218
>gi|229462862|sp|Q3US41.2|ESRP1_MOUSE RecName: Full=Epithelial splicing regulatory protein 1; AltName:
Full=RNA-binding motif protein 35A; AltName:
Full=RNA-binding protein 35A
Length = 680
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 241 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 300
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 301 GEDFLKIAG-GTSNE--------------VAQFLSKE----------------------- 322
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 323 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 377
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HKE +G R + L S A
Sbjct: 378 CEEYAQNALRKHKELLGKRYIELFRSTA 405
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 109/256 (42%), Gaps = 47/256 (18%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 358 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKELLGKRYIELFRSTAAEVQQV------ 411
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 412 ----------------LNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNVRD--CIRLRGLP 452
Query: 152 YECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 453 YAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTM 512
Query: 209 GHRLVTLVMSGAQWF-------------LSPP---LTNETPISRLDLTGSPVRSTICVLC 252
R V + A+ LSPP L +P S + V T +
Sbjct: 513 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPTAVIPTEAAIY 572
Query: 253 HP---LTPRSVRPRSV 265
P L PR+++P +
Sbjct: 573 QPSLLLNPRALQPSTA 588
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 222 DSTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 281
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 282 LQRHKHHMGTRYIEVYKATGEDFL 305
>gi|440804101|gb|ELR24980.1| Znfinger in Ran binding protein [Acanthamoeba castellanii str.
Neff]
Length = 732
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 48/88 (54%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVD 193
+ GS + + ++GLP+ DV F GL+IVP GI + HD+ GR +GVAY++F
Sbjct: 235 LAEGSEEETKVIVMRGLPWSATDADVGMFFSGLDIVPGGIHLIHDHTGRPSGVAYVEFSS 294
Query: 194 KENAEKALLRHKEKIGHRLVTLVMSGAQ 221
E AL RH IG R + + S A
Sbjct: 295 AEEVNNALQRHNGFIGSRYIEVYPSDAN 322
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 34/55 (61%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
IVP I L+ D GR SG A VEFSS ++ ALQRH +G RYIE+Y + S
Sbjct: 269 IVPGGIHLIHDHTGRPSGVAYVEFSSAEEVNNALQRHNGFIGSRYIEVYPSDANS 323
>gi|74183823|dbj|BAE24496.1| unnamed protein product [Mus musculus]
Length = 680
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 241 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 300
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 301 GEDFLKIAG-GTSNE--------------VAQFLSKE----------------------- 322
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 323 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 377
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HKE +G R + L S A
Sbjct: 378 CEEYAQNALRKHKELLGKRYIELFRSTA 405
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 109/256 (42%), Gaps = 47/256 (18%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 358 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKELLGKRYIELFRSTAAEVQQV------ 411
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 412 ----------------LNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNVRD--CIRLRGLP 452
Query: 152 YECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 453 YAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTM 512
Query: 209 GHRLVTLVMSGAQWF-------------LSPP---LTNETPISRLDLTGSPVRSTICVLC 252
R V + A+ LSPP L +P S + V T +
Sbjct: 513 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPTAVIPTEAAIY 572
Query: 253 HP---LTPRSVRPRSV 265
P L PR+++P +
Sbjct: 573 QPSLLLNPRALQPSTA 588
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 222 DSTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 281
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 282 LQRHKHHMGTRYIEVYKATGEDFL 305
>gi|403290547|ref|XP_003936375.1| PREDICTED: epithelial splicing regulatory protein 2 [Saimiri
boliviensis boliviensis]
Length = 715
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 87/202 (43%), Gaps = 35/202 (17%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIEL+
Sbjct: 365 FLGPECPVTGGAEGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRS 424
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ R G A + +AL +G
Sbjct: 425 TAAEVQQVLNRYASG-------------------PLLPTLTAPLLPIPFALA------AG 459
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ D C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ E
Sbjct: 460 TGRD--CVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAE 517
Query: 196 NAEKALLR-HKEKIGHRLVTLV 216
A A R HK+ + R V +V
Sbjct: 518 RALAAAQRCHKKVMKERYVEVV 539
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYM 76
++FFK + + L + GR +GEA + F VD QR ALQRHK +MG RYIE+Y
Sbjct: 262 ARFFKGLNVARGGVALCLNAQGRRNGEALIRF--VDSEQRDLALQRHKHHMGVRYIEVYK 319
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
G + G GT +++FL++
Sbjct: 320 ATGEEFVKIAG-GTS--------------LEVARFLSRE--------------------- 343
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFV 192
DQ +RL+GLP+ DV FL G E G+ GR TG A+ F
Sbjct: 344 ----DQVILRLRGLPFSAGPTDVLGFL-GPECPVTGGAEGLLFVRHPDGRPTGDAFALFA 398
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL RHK +G R + L S A
Sbjct: 399 CEELAQAALRRHKGMLGKRYIELFRSTA 426
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +DV +F +GL + G+ + + GR G A I+FVD E + AL
Sbjct: 244 ETVVRARGLPWQSSDQDVARFFKGLNVARGGVALCLNAQGRRNGEALIRFVDSEQRDLAL 303
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + F+
Sbjct: 304 QRHKHHMGVRYIEVYKATGEEFV 326
>gi|26334977|dbj|BAC31189.1| unnamed protein product [Mus musculus]
Length = 500
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 228 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVY--- 284
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
+A G G S ++QFL+K
Sbjct: 285 -----KATGEDFLKIAGGTSNE-------VAQFLSKE----------------------- 309
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 310 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 364
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HKE +G R + L S A
Sbjct: 365 CEEYAQNALRKHKELLGKRYIELFRSTA 392
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 209 DSTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 268
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 269 LQRHKHHMGTRYIEVYKATGEDFL 292
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 60/146 (41%), Gaps = 30/146 (20%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF P+ IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+
Sbjct: 331 FFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKELLGKRYIELFRS 390
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ R + TP + + QF+ R
Sbjct: 391 TAAEVQQVLNRFSSAPLIPLPTPPIIPVL-PQQFVPPTNVRD------------------ 431
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFL 163
C+RL+GLPY ED+ FL
Sbjct: 432 ------CIRLRGLPYAATIEDILDFL 451
>gi|166831595|gb|ABY90120.1| RNA binding motif protein 12 (predicted) [Callithrix jacchus]
Length = 1460
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 89/184 (48%), Gaps = 13/184 (7%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ LL D GR++G V+F S D AL+R++ M RY+E+ A R
Sbjct: 332 VHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV--------SPATERQWV 383
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
GG + +G + + + R+K + + +G C+ L+GLP
Sbjct: 384 AAGGHITFKQNMGPSGQAHPPPQTLPRSKSPSGQKRSRSRSPHEAG-----FCVYLKGLP 438
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL RHK+ +G+R
Sbjct: 439 FEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 212 LVTL 215
+ +
Sbjct: 499 FIQV 502
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMILNPEGDVSSA--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K+
Sbjct: 543 -KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 ERLHRKKLNGR 612
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++
Sbjct: 3 VVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMM 58
Query: 203 RHKEKIGHRLVTLVMS 218
R I VTL++S
Sbjct: 59 RTGGTIKGSKVTLLLS 74
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 850 TVIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVI 909
Query: 203 RHKEK-IGHRLVTLV 216
++ IG R V L+
Sbjct: 910 DLNDRPIGSRKVKLM 924
>gi|334326246|ref|XP_001379501.2| PREDICTED: epithelial splicing regulatory protein 1 [Monodelphis
domestica]
Length = 677
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 90/208 (43%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG+RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGNRYIEVY--- 298
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
+A G G S ++QFL+K
Sbjct: 299 -----KATGEDFLKIAGGTSNE-------VAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATAEEVLAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQV------ 412
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 413 ----------------LNRFSSTPLIPLPTPPIIPVLPQQ-FVTPTNVRD--CIRLRGLP 453
Query: 152 YECKKEDVEKFLEGLE--IVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ +FL I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YAATIEDILEFLGEFSTAIQTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM 513
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 514 KDRYVEVFQCSAE 526
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DNTIVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G+R + + + + FL
Sbjct: 283 LQRHKHHMGNRYIEVYKATGEDFL 306
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELYMEEGT 80
+F I + ++ + GR SG+A ++ S D A A Q+ HK M DRY+E++
Sbjct: 467 EFSTAIQTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQ---C 523
Query: 81 SSKEANGRGTGG 92
S++E N GG
Sbjct: 524 SAEEMNFVLMGG 535
>gi|354477974|ref|XP_003501192.1| PREDICTED: RNA-binding protein 12 [Cricetulus griseus]
Length = 1463
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 94/194 (48%), Gaps = 13/194 (6%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF + + LL D GR++G V+F S D AL+R++ M RY+E+ +
Sbjct: 322 EFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-----SP 376
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
+ E GG K + +G + + + R+K + + +G
Sbjct: 377 ATERQWVAAGGHITFKQS---MGPSGQAHPPPQTLPRSKSPSGQKRSRSRSPHEAG---- 429
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
C+ L+GLP+E + + V F + L+IV + I I + G+ TG +++F + + + AL
Sbjct: 430 -YCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNDADYKAAL 488
Query: 202 LRHKEKIGHRLVTL 215
RHK+ +G+R + +
Sbjct: 489 CRHKQYMGNRFIQV 502
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 89/191 (46%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMVLNPEGDVSSA--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + + + + D G+ G A +QF +++A K+
Sbjct: 543 -KVCAHITNIPFSITKMDVLQFLEGIPVDESAVHVLVDNNGQGLGQALVQFKTEDDARKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 EHLHRKKLNGR 612
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++
Sbjct: 3 VVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMM 58
Query: 203 RHKEKIGHRLVTLVMS 218
R I VTL++S
Sbjct: 59 RTGGTIKGSKVTLLLS 74
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 855 IKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDL 914
Query: 205 KEK-IGHRLVTLV 216
++ IG R V L+
Sbjct: 915 NDRPIGSRKVKLM 927
>gi|296199717|ref|XP_002747276.1| PREDICTED: RNA-binding protein 12 isoform 1 [Callithrix jacchus]
Length = 1460
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 89/184 (48%), Gaps = 13/184 (7%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ LL D GR++G V+F S D AL+R++ M RY+E+ A R
Sbjct: 332 VHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV--------SPATERQWV 383
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
GG + +G + + + R+K + + +G C+ L+GLP
Sbjct: 384 AAGGHITFKQNMGPSGQAHPPPQTLPRSKSPSGQKRSRSRSPHEAG-----FCVYLKGLP 438
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL RHK+ +G+R
Sbjct: 439 FEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 212 LVTL 215
+ +
Sbjct: 499 FIQV 502
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMILNPEGDVSSA--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K+
Sbjct: 543 -KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 ERLHRKKLNGR 612
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++
Sbjct: 3 VVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMM 58
Query: 203 RHKEKIGHRLVTLVMS 218
R I VTL++S
Sbjct: 59 RTGGTIKGSKVTLLLS 74
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 850 TVIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVI 909
Query: 203 RHKEK-IGHRLVTLV 216
++ IG R V L+
Sbjct: 910 DLNDRPIGSRKVKLM 924
>gi|197100361|ref|NP_001125474.1| RNA-binding protein 12 [Pongo abelii]
gi|75070796|sp|Q5RBM8.1|RBM12_PONAB RecName: Full=RNA-binding protein 12; AltName: Full=RNA-binding
motif protein 12
gi|55728164|emb|CAH90832.1| hypothetical protein [Pongo abelii]
Length = 932
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 54/217 (24%), Positives = 101/217 (46%), Gaps = 23/217 (10%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF + + LL D GR++G V+F S D AL+R++ M RY+E+
Sbjct: 323 FFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-------- 374
Query: 83 KEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQ 142
A R GG + +G + + + R+K + + +G
Sbjct: 375 SPATERQWVAAGGHITFKQNMGPSGQTHPPPQTLPRSKSPSGQKRSRSRSPHEAGF---- 430
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
C+ L+GLP+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL
Sbjct: 431 -CVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC 489
Query: 203 RHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDL 239
RHK+ +G+R + + P+T + + ++D+
Sbjct: 490 RHKQYMGNRFIQV----------HPITKKGMLEKIDM 516
Score = 64.3 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMILNPEGDVNSA--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K+
Sbjct: 543 -KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 ERLHRKKLNGR 612
Score = 39.7 bits (91), Expect = 1.6, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++R
Sbjct: 5 IRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMMRT 60
Query: 205 KEKIGHRLVTLVMS 218
I VTL++S
Sbjct: 61 GGTIKGSKVTLLLS 74
Score = 37.7 bits (86), Expect = 5.8, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 860 IKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDL 919
Query: 205 KEK-IGHRLVTL 215
++ IG R V L
Sbjct: 920 NDRPIGSRKVNL 931
>gi|12053991|emb|CAC20441.1| RNA binding motif protein 12 [Homo sapiens]
Length = 932
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 54/217 (24%), Positives = 101/217 (46%), Gaps = 23/217 (10%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF + + LL D GR++G V+F S D AL+R++ M RY+E+
Sbjct: 323 FFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-------- 374
Query: 83 KEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQ 142
A R GG + +G + + + R+K + + +G
Sbjct: 375 SPATERQWVAAGGHITFKQNMGPSGQTHPPPQTLPRSKSPSGQKRSRSRSPHEAGF---- 430
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
C+ L+GLP+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL
Sbjct: 431 -CVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC 489
Query: 203 RHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDL 239
RHK+ +G+R + + P+T + + ++D+
Sbjct: 490 RHKQYMGNRFIQV----------HPITKKGMLEKIDM 516
Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMILNPEGDVNSA--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K
Sbjct: 543 -KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKT 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 ERLHRKKLNGR 612
Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 858 IKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDL 917
Query: 205 KEK-IGHRLVTLVM 217
++ IG R V LV+
Sbjct: 918 NDRPIGSRKVKLVL 931
Score = 39.7 bits (91), Expect = 1.6, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++R
Sbjct: 5 IRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMMRT 60
Query: 205 KEKIGHRLVTLVMS 218
I VTL++S
Sbjct: 61 GGTIKGSKVTLLLS 74
>gi|26330362|dbj|BAC28911.1| unnamed protein product [Mus musculus]
Length = 992
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 54/218 (24%), Positives = 103/218 (47%), Gaps = 23/218 (10%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF + + LL D GR++G V+F S D AL+R++ M RY+E+ +
Sbjct: 322 EFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-----SP 376
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
+ E GG K + +G + + + R+K + + +G
Sbjct: 377 ATERQWVAAGGHITFKQS---MGPSGQAHPPPQTLPRSKSPSGQKRSRSRSPHEAGF--- 430
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
C+ L+GLP+E + + V F + L+IV + I I + G+ TG +++F + + + AL
Sbjct: 431 --CVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNDADYKAAL 488
Query: 202 LRHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDL 239
RHK+ +G+R + + P+T + + ++D+
Sbjct: 489 CRHKQYMGNRFIQV----------HPITKKGMLEKIDM 516
Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 49/191 (25%), Positives = 89/191 (46%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQRELVLNPEGEVSSA--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + + + + D G+ G A +QF +++A K+
Sbjct: 543 -KVCAHITNIPFSITKMDVLQFLEGIPVDESAVHVLVDNNGQGLGQALVQFKTEDDAHKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 EHLHRKKLNGR 612
Score = 40.0 bits (92), Expect = 1.5, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 918 IKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDL 977
Query: 205 KEK-IGHRLVTLVM 217
++ IG R V LV+
Sbjct: 978 NDRPIGSRKVKLVL 991
Score = 39.7 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++R
Sbjct: 5 IRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMMRT 60
Query: 205 KEKIGHRLVTLVMS 218
I VTL++S
Sbjct: 61 GGTIKGSKVTLLLS 74
>gi|426391523|ref|XP_004062122.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 12 [Gorilla
gorilla gorilla]
Length = 1474
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 89/184 (48%), Gaps = 13/184 (7%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ LL D GR++G V+F S D AL+R++ M RY+E+ A R
Sbjct: 340 VHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV--------SPATERQWV 391
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
GG + +G + + + R+K + + +G C+ L+GLP
Sbjct: 392 AAGGHITFKQNMGPSGQTHPPPQTLPRSKSPSGQKRSRSRSPHEAG-----FCVYLKGLP 446
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL RHK+ +G+R
Sbjct: 447 FEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNR 506
Query: 212 LVTL 215
+ +
Sbjct: 507 FIQV 510
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 457 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----P 512
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 513 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMILNPEGDVNSA--- 550
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K+
Sbjct: 551 -KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKS 609
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 610 ERLHRKKLNGR 620
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++
Sbjct: 3 VVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMM 58
Query: 203 RHKEKIGHRLVTLVMS 218
R I VTL++S
Sbjct: 59 RTGGTIKGSKVTLLLS 74
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 864 TVIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVI 923
Query: 203 RHKEK-IGHRLVTLV 216
++ IG R V L+
Sbjct: 924 DLNDRPIGSRKVKLM 938
>gi|344250517|gb|EGW06621.1| Epithelial splicing regulatory protein 1 [Cricetulus griseus]
Length = 677
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 90/212 (42%), Gaps = 59/212 (27%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 90 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 149
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 150 GEDFLKIAG-GTSN--------------EVAQFLSKE----------------------- 171
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFL----------EGLEIVPNGITIPHDYAGRCTGVAY 188
+Q +R++GLP+ E+V F EG+ V T P GR TG A+
Sbjct: 172 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFV----TYPD---GRPTGDAF 222
Query: 189 IQFVDKENAEKALLRHKEKIGHRLVTLVMSGA 220
+ F +E A+ AL +HK+ +G R + L S A
Sbjct: 223 VLFACEEYAQNALRKHKDLLGKRYIELFRSTA 254
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 71 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 130
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 131 LQRHKHHMGTRYIEVYKATGEDFL 154
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ T+++ GR +G
Sbjct: 207 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELF--RSTAAEVQQGRPSG 264
>gi|324506224|gb|ADY42662.1| Heterogeneous nuclear ribonucleoprotein F [Ascaris suum]
Length = 416
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 94/237 (39%), Gaps = 61/237 (25%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
F + I +I +GR+SGE VE + + AL+ ++ + RYIE
Sbjct: 24 NFLQGITAKSITFTLTSSGRASGECYVELNDNSAVKEALKLDRNEINGRYIE-------- 75
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
+F +S E + A+ + V+ GS
Sbjct: 76 -----------------------VFTVS-------------EGELAMMVRHGVIRGSGES 99
Query: 142 QC------CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ +RL+GLPY +D+++F +GL++ + I + GR +G A+++ KE
Sbjct: 100 ESRYASNYVVRLRGLPYSANVDDIKEFFKGLDVA--DVVIDKEQGGRPSGEAFVRLASKE 157
Query: 196 NAEKALLRHKEKIGHRLVTLVMSGAQWF---------LSPPLTNETPISRLDLTGSP 243
+AE AL R K +G R V + S + + PP+ P+ L P
Sbjct: 158 HAELALERSKNNMGSRYVEVFRSSGEEMDNSFYTSRGIPPPMAGPIPLRGLSPASDP 214
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 11 LIHITYCLLCSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDR 70
L + L +FFKP+ V I L ++ R SG+ V FS++ +A+ AL R+K+N+G R
Sbjct: 278 LPYNVTALDIEEFFKPLNCVEIKLGYNEDRRLSGDGIVLFSTMAEARDALSRNKNNIGSR 337
Query: 71 YIELYMEEGTS----SKEANGRGTGGFGGVKSTPYG 102
YIEL+ GT+ +K R GG G PYG
Sbjct: 338 YIELF--PGTNIPYPTKYTTFRLIGGTGPSGRGPYG 371
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RL+GLP+ K+ DV FL+G I IT +GR +G Y++ D ++AL
Sbjct: 8 IRLRGLPFAAKESDVRNFLQG--ITAKSITFTLTSSGRASGECYVELNDNSAVKEALKLD 65
Query: 205 KEKIGHRLVTL 215
+ +I R + +
Sbjct: 66 RNEINGRYIEV 76
>gi|114155120|ref|NP_083673.3| RNA-binding protein 12 [Mus musculus]
gi|114155125|ref|NP_733486.2| RNA-binding protein 12 [Mus musculus]
gi|262527571|sp|Q8R4X3.3|RBM12_MOUSE RecName: Full=RNA-binding protein 12; AltName: Full=RNA-binding
motif protein 12; AltName: Full=SH3/WW domain anchor
protein in the nucleus; Short=SWAN
gi|26348755|dbj|BAC38017.1| unnamed protein product [Mus musculus]
gi|30851612|gb|AAH52473.1| RNA binding motif protein 12 [Mus musculus]
Length = 992
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 54/218 (24%), Positives = 103/218 (47%), Gaps = 23/218 (10%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF + + LL D GR++G V+F S D AL+R++ M RY+E+ +
Sbjct: 322 EFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-----SP 376
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
+ E GG K + +G + + + R+K + + +G
Sbjct: 377 ATERQWVAAGGHITFKQS---MGPSGQAHPPPQTLPRSKSPSGQKRSRSRSPHEAGF--- 430
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
C+ L+GLP+E + + V F + L+IV + I I + G+ TG +++F + + + AL
Sbjct: 431 --CVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNDADYKAAL 488
Query: 202 LRHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDL 239
RHK+ +G+R + + P+T + + ++D+
Sbjct: 489 CRHKQYMGNRFIQV----------HPITKKGMLEKIDM 516
Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 49/191 (25%), Positives = 89/191 (46%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQRELVLNPEGEVSSA--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + + + + D G+ G A +QF +++A K+
Sbjct: 543 -KVCAHITNIPFSITKMDVLQFLEGIPVDESAVHVLVDNNGQGLGQALVQFKTEDDAHKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 EHLHRKKLNGR 612
Score = 40.0 bits (92), Expect = 1.5, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 918 IKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDL 977
Query: 205 KEK-IGHRLVTLVM 217
++ IG R V LV+
Sbjct: 978 NDRPIGSRKVKLVL 991
Score = 39.7 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++R
Sbjct: 5 IRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMMRT 60
Query: 205 KEKIGHRLVTLVMS 218
I VTL++S
Sbjct: 61 GGTIKGSKVTLLLS 74
>gi|19923345|ref|NP_006038.2| RNA-binding protein 12 [Homo sapiens]
gi|23510462|ref|NP_690051.1| RNA-binding protein 12 [Homo sapiens]
gi|311893287|ref|NP_001185767.1| RNA-binding protein 12 [Homo sapiens]
gi|312032348|ref|NP_001185769.1| RNA-binding protein 12 [Homo sapiens]
gi|353411938|ref|NP_001238775.1| RNA-binding protein 12 [Pan troglodytes]
gi|397523818|ref|XP_003831915.1| PREDICTED: RNA-binding protein 12 [Pan paniscus]
gi|30173387|sp|Q9NTZ6.1|RBM12_HUMAN RecName: Full=RNA-binding protein 12; AltName: Full=RNA-binding
motif protein 12; AltName: Full=SH3/WW domain anchor
protein in the nucleus; Short=SWAN
gi|15215375|gb|AAH12787.1| RNA binding motif protein 12 [Homo sapiens]
gi|15559252|gb|AAH13981.1| RNA binding motif protein 12 [Homo sapiens]
gi|19070194|gb|AAL83752.1| SWAN [Homo sapiens]
gi|19070200|gb|AAL83755.1| SWAN [Homo sapiens]
gi|21666372|gb|AAM73682.1| swan [Homo sapiens]
gi|119596588|gb|EAW76182.1| hCG38213, isoform CRA_e [Homo sapiens]
gi|119596590|gb|EAW76184.1| hCG38213, isoform CRA_e [Homo sapiens]
gi|119596594|gb|EAW76188.1| hCG38213, isoform CRA_e [Homo sapiens]
gi|123993635|gb|ABM84419.1| RNA binding motif protein 12 [synthetic construct]
gi|123999855|gb|ABM87436.1| RNA binding motif protein 12 [synthetic construct]
gi|168278717|dbj|BAG11238.1| RNA binding motif protein 12 [synthetic construct]
gi|193787298|dbj|BAG52504.1| unnamed protein product [Homo sapiens]
gi|410216986|gb|JAA05712.1| RNA binding motif protein 12 [Pan troglodytes]
gi|410216988|gb|JAA05713.1| RNA binding motif protein 12 [Pan troglodytes]
gi|410260650|gb|JAA18291.1| RNA binding motif protein 12 [Pan troglodytes]
gi|410260652|gb|JAA18292.1| RNA binding motif protein 12 [Pan troglodytes]
gi|410297724|gb|JAA27462.1| RNA binding motif protein 12 [Pan troglodytes]
gi|410297726|gb|JAA27463.1| RNA binding motif protein 12 [Pan troglodytes]
gi|410355577|gb|JAA44392.1| RNA binding motif protein 12 [Pan troglodytes]
Length = 932
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 54/217 (24%), Positives = 101/217 (46%), Gaps = 23/217 (10%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF + + LL D GR++G V+F S D AL+R++ M RY+E+
Sbjct: 323 FFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-------- 374
Query: 83 KEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQ 142
A R GG + +G + + + R+K + + +G
Sbjct: 375 SPATERQWVAAGGHITFKQNMGPSGQTHPPPQTLPRSKSPSGQKRSRSRSPHEAGF---- 430
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
C+ L+GLP+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL
Sbjct: 431 -CVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC 489
Query: 203 RHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDL 239
RHK+ +G+R + + P+T + + ++D+
Sbjct: 490 RHKQYMGNRFIQV----------HPITKKGMLEKIDM 516
Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMILNPEGDVNSA--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K+
Sbjct: 543 -KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 ERLHRKKLNGR 612
Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 858 IKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDL 917
Query: 205 KEK-IGHRLVTLVM 217
++ IG R V LV+
Sbjct: 918 NDRPIGSRKVKLVL 931
Score = 39.7 bits (91), Expect = 1.6, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++R
Sbjct: 5 IRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMMRT 60
Query: 205 KEKIGHRLVTLVMS 218
I VTL++S
Sbjct: 61 GGTIKGSKVTLLLS 74
>gi|332248953|ref|XP_003273629.1| PREDICTED: RNA-binding protein 12-like isoform 7 [Nomascus
leucogenys]
Length = 932
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 54/217 (24%), Positives = 101/217 (46%), Gaps = 23/217 (10%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF + + LL D GR++G V+F S D AL+R++ M RY+E+
Sbjct: 323 FFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-------- 374
Query: 83 KEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQ 142
A R GG + +G + + + R+K + + +G
Sbjct: 375 SPATERQWVAAGGHITFKQNMGPSGQTHPPPQTLPRSKSPSGQKRSRSRSPHEAGF---- 430
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
C+ L+GLP+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL
Sbjct: 431 -CVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC 489
Query: 203 RHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDL 239
RHK+ +G+R + + P+T + + ++D+
Sbjct: 490 RHKQYMGNRFIQV----------HPITKKGMLEKIDM 516
Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMILNPEGDVNSA--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K+
Sbjct: 543 -KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 ERLHRKKLNGR 612
Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 858 IKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDL 917
Query: 205 KEK-IGHRLVTLVM 217
++ IG R V LV+
Sbjct: 918 NDRPIGSRKVKLVL 931
Score = 39.7 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++R
Sbjct: 5 IRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMMRT 60
Query: 205 KEKIGHRLVTLVMS 218
I VTL++S
Sbjct: 61 GGTIKGSKVTLLLS 74
>gi|238006754|gb|ACR34412.1| unknown [Zea mays]
Length = 251
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY--MEEG 79
+FF + V+ LL+ + GR +GEA V F + A+ AL R + NMG RY+E++ +
Sbjct: 62 KFFVGLDIVDCLLVNKN-GRFTGEAFVVFPTAMQAEFALHRDRQNMGRRYVEVFRCKKHE 120
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA 139
AN GG+ F ++ R + +G++
Sbjct: 121 YYCAIANEVNQGGY-----------------FEPEYRRSPPPPRPRKPSEDKGSMEYTEV 163
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
++L+GLPY ED+ KF E+ + I + G+ TG A+++F E A+
Sbjct: 164 -----LKLRGLPYSATTEDIIKFFLEYELAEENVHIAYRSDGKATGEAFVEFPTAEVAKT 218
Query: 200 ALLRHKEKIGHRLVTLVMS 218
A+ + K IG R V L S
Sbjct: 219 AMCKDKMTIGTRYVELFPS 237
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+RL+GLP++C DV KF GL+IV + + GR TG A++ F AE AL R
Sbjct: 45 CVRLRGLPFDCNDIDVCKFFVGLDIVDCLLV---NKNGRFTGEAFVVFPTAMQAEFALHR 101
Query: 204 HKEKIGHRLVTL 215
++ +G R V +
Sbjct: 102 DRQNMGRRYVEV 113
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 31 NILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRG 89
N+ + G+++GEA VEF + + A+ A+ + K +G RY+EL+ + A RG
Sbjct: 191 NVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKDKMTIGTRYVELFPSTPEEASRAKSRG 249
>gi|312385573|gb|EFR30037.1| hypothetical protein AND_00606 [Anopheles darlingi]
Length = 1660
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 78/193 (40%), Gaps = 46/193 (23%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ L GR +GEA V F S + AL+RHK ++G RYIE+Y ANG
Sbjct: 275 VALCLSPQGRRNGEALVRFVSQEHRDMALKRHKHHIGSRYIEVY--------RANGEDFL 326
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
G S FL K GA Q +R++GLP
Sbjct: 327 SVAGGASNE-------AQAFLTK-----------------GA--------QVIIRMRGLP 354
Query: 152 YECKKEDVEKFLEGLEIVPN------GITIPHDYAGRCTGVAYIQFVDKENAEKALLRHK 205
Y+C + V F E N GI GR TG A++ F + + KAL +H+
Sbjct: 355 YDCTAKQVLDFFANGENSCNVLDGADGILFVKKPDGRATGDAFVLFEQESDVNKALSKHR 414
Query: 206 EKIGHRLVTLVMS 218
E IG R + L S
Sbjct: 415 ELIGQRYIELFRS 427
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 22/181 (12%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL + GR++G+A V F D +AL +H+ +G RYIEL+ ++ R
Sbjct: 382 ILFVKKPDGRATGDAFVLFEQESDVNKALSKHRELIGQRYIELFRSTTAEVQQVLNRSMD 441
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
P + A+ ++ L Q + SG+ ++ C+RL+GLP
Sbjct: 442 PKTYEPPQPPLI---------------AQLPQVQMQLLPQHVITSGT--EKNCIRLRGLP 484
Query: 152 YECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENA--EKALLRHKEK 207
YE K E + FL+ IV G+ + ++ G+ G A+IQ +D E A + A +H +
Sbjct: 485 YEAKVEHILHFLDDFAKHIVYQGVHLVYNAQGQFNGEAFIQ-MDSEAAAYQSAQQKHHKN 543
Query: 208 I 208
+
Sbjct: 544 M 544
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
C +R +GLP++ +D+ KF GL + G+ + GR G A ++FV +E+ + AL
Sbjct: 245 CIVRARGLPWQSSDQDIAKFFRGLNVAKGGVALCLSPQGRRNGEALVRFVSQEHRDMALK 304
Query: 203 RHKEKIGHRLVTLVMSGAQWFLS 225
RHK IG R + + + + FLS
Sbjct: 305 RHKHHIGSRYIEVYRANGEDFLS 327
>gi|83320105|ref|NP_001032746.1| RNA-binding protein 12 [Rattus norvegicus]
gi|31324614|gb|AAP48569.1| swan [Rattus norvegicus]
gi|149030841|gb|EDL85868.1| rCG37481, isoform CRA_a [Rattus norvegicus]
gi|149030844|gb|EDL85871.1| rCG37481, isoform CRA_a [Rattus norvegicus]
Length = 1032
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 54/218 (24%), Positives = 103/218 (47%), Gaps = 23/218 (10%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF + + LL D GR++G V+F S D AL+R++ M RY+E+ +
Sbjct: 322 EFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-----SP 376
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
+ E GG K + +G + + + R+K + + +G
Sbjct: 377 ATERQWVAAGGHITFKQS---MGPSGQAHPPPQTLPRSKSPSGQKRSRSRSPHEAGF--- 430
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
C+ L+GLP+E + + V F + L+IV + I I + G+ TG +++F + + + AL
Sbjct: 431 --CVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNDADYKAAL 488
Query: 202 LRHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDL 239
RHK+ +G+R + + P+T + + ++D+
Sbjct: 489 CRHKQYMGNRFIQV----------HPITKKGMLEKIDM 516
Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMVLNPEGEVSSA--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF +++A K+
Sbjct: 543 -KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKTEDDAHKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 EHLHRKKLNGR 612
Score = 40.0 bits (92), Expect = 1.5, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 958 IKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDL 1017
Query: 205 KEK-IGHRLVTLVM 217
++ IG R V LV+
Sbjct: 1018 NDRPIGSRKVKLVL 1031
Score = 39.7 bits (91), Expect = 1.9, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++R
Sbjct: 5 IRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMMRT 60
Query: 205 KEKIGHRLVTLVMS 218
I VTL++S
Sbjct: 61 GGTIKGSKVTLLLS 74
>gi|19070198|gb|AAL83754.1| SWAN [Mus musculus]
gi|21666374|gb|AAM73683.1| swan [Mus musculus]
gi|21666376|gb|AAM73684.1| swan [Mus musculus]
Length = 1003
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 54/218 (24%), Positives = 103/218 (47%), Gaps = 23/218 (10%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF + + LL D GR++G V+F S D AL+R++ M RY+E+ +
Sbjct: 322 EFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-----SP 376
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
+ E GG K + +G + + + R+K + + +G
Sbjct: 377 ATERQWVAAGGHITFKQS---MGPSGQAHPPPQTLPRSKSPSGQKRSRSRSPHEAGF--- 430
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
C+ L+GLP+E + + V F + L+IV + I I + G+ TG +++F + + + AL
Sbjct: 431 --CVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNDADYKAAL 488
Query: 202 LRHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDL 239
RHK+ +G+R + + P+T + + ++D+
Sbjct: 489 CRHKQYMGNRFIQV----------HPITKKGMLEKIDM 516
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQRELVLNPEGEVSSA--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF +++A K+
Sbjct: 543 -KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKTEDDAHKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 EHLHRKKLNGR 612
Score = 40.0 bits (92), Expect = 1.5, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 929 IKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDL 988
Query: 205 KEK-IGHRLVTLVM 217
++ IG R V LV+
Sbjct: 989 NDRPIGSRKVKLVL 1002
Score = 39.7 bits (91), Expect = 1.9, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++R
Sbjct: 5 IRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMMRT 60
Query: 205 KEKIGHRLVTLVMS 218
I VTL++S
Sbjct: 61 GGTIKGSKVTLLLS 74
>gi|74184867|dbj|BAE39056.1| unnamed protein product [Mus musculus]
Length = 914
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 54/218 (24%), Positives = 103/218 (47%), Gaps = 23/218 (10%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF + + LL D GR++G V+F S D AL+R++ M RY+E+ +
Sbjct: 244 EFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-----SP 298
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
+ E GG K + +G + + + R+K + + +G
Sbjct: 299 ATERQWVAAGGHITFKQS---MGPSGQAHPPPQTLPRSKSPSGQKRSRSRSPHEAGF--- 352
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
C+ L+GLP+E + + V F + L+IV + I I + G+ TG +++F + + + AL
Sbjct: 353 --CVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNDADYKAAL 410
Query: 202 LRHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDL 239
RHK+ +G+R + + P+T + + ++D+
Sbjct: 411 CRHKQYMGNRFIQV----------HPITKKGMLEKIDM 438
Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 49/191 (25%), Positives = 89/191 (46%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 371 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVH----P 426
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 427 ITKK-------------------GMLEKIDMIRKRLQNFSYDQRELVLNPEGEVSSA--- 464
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + + + + D G+ G A +QF +++A K+
Sbjct: 465 -KVCAHITNIPFSITKMDVLQFLEGIPVDESAVHVLVDNNGQGLGQALVQFKTEDDAHKS 523
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 524 EHLHRKKLNGR 534
Score = 40.0 bits (92), Expect = 1.5, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 840 IKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDL 899
Query: 205 KEK-IGHRLVTLVM 217
++ IG R V LV+
Sbjct: 900 NDRPIGSRKVKLVL 913
>gi|308477529|ref|XP_003100978.1| CRE-HRPF-2 protein [Caenorhabditis remanei]
gi|308264322|gb|EFP08275.1| CRE-HRPF-2 protein [Caenorhabditis remanei]
Length = 621
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 32/181 (17%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR +GEA VEF + DDA +A++ + M +RYIE G +N
Sbjct: 109 GRPNGEAYVEFKTQDDAGKAMENDRKEMSNRYIESEFLIGKQENNSN------------- 155
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
+ +F ++ ++ R G+ + +RL+G+P+ CK+ED+
Sbjct: 156 ---ILVFSVTDVEGEFEFRPD--------------PDGNGEENHVVRLRGIPWSCKEEDI 198
Query: 160 EKFLEGLEIVPNGITIPHDYAGRC--TGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVM 217
+F +GLE +P I I R +G A+++F + AE A+ + +G R + + M
Sbjct: 199 NQFFDGLEPLPAEIVIGGTGGPRSRPSGEAFVRFATQAAAEAAMEYNNRHMGTRYIEVFM 258
Query: 218 S 218
S
Sbjct: 259 S 259
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
FF P+ +I L +D GR SG+A EF S +D Q L ++ MG RY+EL+ G
Sbjct: 371 FFSPLRCHSIKLGINDTGRPSGDAIAEFDSYNDLQAGLSKNNQRMGRRYVELFDTRG 427
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVD 193
+ SG + +RL+GLP+ ++D+++F GL + GR G AY++F
Sbjct: 65 ISSGPPLKGQYVRLRGLPFNATEKDIQEFFSGLGVKRVKFVC---TTGRPNGEAYVEFKT 121
Query: 194 KENAEKALLRHKEKIGHRLV 213
+++A KA+ ++++ +R +
Sbjct: 122 QDDAGKAMENDRKEMSNRYI 141
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 33/226 (14%)
Query: 21 SQFFKPIVPVNILLLTDDAG----RSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
+QFF + P+ ++ G R SGEA V F++ A+ A++ + +MG RYIE++M
Sbjct: 199 NQFFDGLEPLPAEIVIGGTGGPRSRPSGEAFVRFATQAAAEAAMEYNNRHMGTRYIEVFM 258
Query: 77 EEGTSSKEANGRGT--------------------GGFGGVKSTPYGVGIFCISQFLAKWM 116
A G G+ G+G + G G S ++
Sbjct: 259 SSMVELNRAKGGGSSAGSYERTGIRPLMSLVRSDSGYGQARGGSGGYGSGGYSGGYDEYS 318
Query: 117 RRA--KRSEMDWALKRQGAVLS----GSAVDQCC-MRLQGLPYECKKEDVEKFLEGLEIV 169
+ A ++ ++ QG S G A D+ + ++GLPY+ +E F L
Sbjct: 319 QGAYGRQDYGGYSSYDQGGYGSDYGKGGASDEPLRIYMRGLPYDADHYAIEAFFSPLRC- 377
Query: 170 PNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTL 215
+ I + + GR +G A +F + + L ++ +++G R V L
Sbjct: 378 -HSIKLGINDTGRPSGDAIAEFDSYNDLQAGLSKNNQRMGRRYVEL 422
>gi|195056424|ref|XP_001995099.1| GH22967 [Drosophila grimshawi]
gi|193899305|gb|EDV98171.1| GH22967 [Drosophila grimshawi]
Length = 1007
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 82/189 (43%), Gaps = 54/189 (28%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR +GEA + F S + AL+RHK ++G RYIE+Y G
Sbjct: 317 GRRNGEALIRFVSQEHRDMALKRHKHHIGSRYIEVYRASG-------------------- 356
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
FLA + ++ A LS A Q +R++GLPY+C + V
Sbjct: 357 ---------EDFLAIAGGASNEAQ---------AFLSKGA--QVIIRMRGLPYDCTPKQV 396
Query: 160 EKF----------LEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIG 209
+F L+G E G+ GR TG A++ F ++ ++ KAL RH+E IG
Sbjct: 397 LEFFTTGESPCHVLDGNE----GVLFVKKPDGRATGDAFVLFANECDSSKALGRHRESIG 452
Query: 210 HRLVTLVMS 218
R + L S
Sbjct: 453 QRYIELFRS 461
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
C +R +GLP++ +D+ KF GL + G+ + GR G A I+FV +E+ + AL
Sbjct: 278 NCIVRARGLPWQSSDQDIAKFFRGLNVAKGGVALCLSPLGRRNGEALIRFVSQEHRDMAL 337
Query: 202 LRHKEKIGHRLVTLVMSGAQWFLS 225
RHK IG R + + + + FL+
Sbjct: 338 KRHKHHIGSRYIEVYRASGEDFLA 361
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 79/185 (42%), Gaps = 19/185 (10%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRG-- 89
+L + GR++G+A V F++ D+ +AL RH+ ++G RYIEL+ ++ R
Sbjct: 416 VLFVKKPDGRATGDAFVLFANECDSSKALGRHRESIGQRYIELFRSTTAEVQQVLNRSMD 475
Query: 90 --TGGFGGVKSTPY-------------GVGIFCISQFLAKWMRRAKRSEMDWALKRQGAV 134
T P VG L A + + L
Sbjct: 476 PKTYESNNHSQPPLIAQLPTMQLPLLPQVGAAAGGHALNPLSANASHANLCPQLPHAPQH 535
Query: 135 LSGSAVDQCCMRLQGLPYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFV 192
L S + C+RL+GLPYE E + FL+ I+ G+ + + G+ +G A+IQ
Sbjct: 536 LITSGTTKNCIRLRGLPYEAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMD 595
Query: 193 DKENA 197
+E+A
Sbjct: 596 LEESA 600
>gi|148674224|gb|EDL06171.1| mCG5227, isoform CRA_a [Mus musculus]
gi|148674225|gb|EDL06172.1| mCG5227, isoform CRA_a [Mus musculus]
Length = 773
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 13/184 (7%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ LL D GR++G V+F S D AL+R++ M RY+E+ + + E G
Sbjct: 332 VHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-----SPATERQWVAAG 386
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
G K + +G + + + R+K + + +G C+ L+GLP
Sbjct: 387 GHITFKQS---MGPSGQAHPPPQTLPRSKSPSGQKRSRSRSPHEAG-----FCVYLKGLP 438
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+E + + V F + L+IV + I I + G+ TG +++F + + + AL RHK+ +G+R
Sbjct: 439 FEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNDADYKAALCRHKQYMGNR 498
Query: 212 LVTL 215
+ +
Sbjct: 499 FIQV 502
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 89/191 (46%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQRELVLNPEGEVSSA--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + + + + D G+ G A +QF +++A K+
Sbjct: 543 -KVCAHITNIPFSITKMDVLQFLEGIPVDESAVHVLVDNNGQGLGQALVQFKTEDDAHKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 EHLHRKKLNGR 612
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++
Sbjct: 3 VVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMM 58
Query: 203 RHKEKIGHRLVTLVMS 218
R I VTL++S
Sbjct: 59 RTGGTIKGSKVTLLLS 74
>gi|344246677|gb|EGW02781.1| RNA-binding protein 12 [Cricetulus griseus]
Length = 997
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 54/218 (24%), Positives = 103/218 (47%), Gaps = 23/218 (10%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF + + LL D GR++G V+F S D AL+R++ M RY+E+ +
Sbjct: 322 EFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-----SP 376
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
+ E GG K + +G + + + R+K + + +G
Sbjct: 377 ATERQWVAAGGHITFKQS---MGPSGQAHPPPQTLPRSKSPSGQKRSRSRSPHEAGY--- 430
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
C+ L+GLP+E + + V F + L+IV + I I + G+ TG +++F + + + AL
Sbjct: 431 --CVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNDADYKAAL 488
Query: 202 LRHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDL 239
RHK+ +G+R + + P+T + + ++D+
Sbjct: 489 CRHKQYMGNRFIQV----------HPITKKGMLEKIDM 516
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 49/191 (25%), Positives = 89/191 (46%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMVLNPEGDVSSA--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + + + + D G+ G A +QF +++A K+
Sbjct: 543 -KVCAHITNIPFSITKMDVLQFLEGIPVDESAVHVLVDNNGQGLGQALVQFKTEDDARKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 EHLHRKKLNGR 612
Score = 39.7 bits (91), Expect = 1.6, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 923 IKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDL 982
Query: 205 KEK-IGHRLVTLVM 217
++ IG R V LV+
Sbjct: 983 NDRPIGSRKVKLVL 996
Score = 39.3 bits (90), Expect = 2.2, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++R
Sbjct: 5 IRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMMRT 60
Query: 205 KEKIGHRLVTLVMS 218
I VTL++S
Sbjct: 61 GGTIKGSKVTLLLS 74
>gi|169731516|gb|ACA64888.1| RNA binding motif protein 12 (predicted) [Callicebus moloch]
Length = 1465
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 13/184 (7%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ LL D GR++G V+F S D AL+R++ M RY+E+ + + E G
Sbjct: 332 VHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-----SPATERQWVAAG 386
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
G K +G + + + R+K + + +G C+ L+GLP
Sbjct: 387 GHITFKQN---MGPSGQAHPPPQTLPRSKSPSGQKRSRSRSPHEAG-----FCVYLKGLP 438
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL RHK+ +G+R
Sbjct: 439 FEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 212 LVTL 215
+ +
Sbjct: 499 FIQV 502
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMILNPEGDVNSA--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K+
Sbjct: 543 -KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 ERLHRKKLNGR 612
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++
Sbjct: 3 VVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMM 58
Query: 203 RHKEKIGHRLVTLVMS 218
R I VTL++S
Sbjct: 59 RTGGTIKGSKVTLLLS 74
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 855 TVIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVI 914
Query: 203 RHKEK-IGHRLVTLV 216
++ IG R V L+
Sbjct: 915 DLNDRPIGSRKVKLM 929
>gi|322778928|gb|EFZ09344.1| hypothetical protein SINV_16613 [Solenopsis invicta]
Length = 565
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 81/193 (41%), Gaps = 46/193 (23%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ L GR +GEA V F + + AL+RHK +MG RYIE+Y G G GT
Sbjct: 7 VALCLSPMGRRNGEALVRFINKEHRDMALKRHKHHMGTRYIEVYKASGEDFVGVAG-GTS 65
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
G A LS A Q +R++GLP
Sbjct: 66 G-------------------------------------EAHAFLSRGA--QVIVRMRGLP 86
Query: 152 YECKKEDVEKFLEGLEIV------PNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHK 205
Y+C + V +F + + +G+ GR TG A++ F +E+A KAL +H+
Sbjct: 87 YDCVAKQVLEFFQSGQKPCQVLDGEDGVLFVKKPDGRATGDAFVLFAKEEDAVKALSKHR 146
Query: 206 EKIGHRLVTLVMS 218
+ IG R + L S
Sbjct: 147 DCIGSRYIELFRS 159
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 24/168 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+L + GR++G+A V F+ +DA +AL +H+ +G RYIEL+ ++ R T
Sbjct: 114 VLFVKKPDGRATGDAFVLFAKEEDAVKALSKHRDCIGSRYIELFRSTTAEVQQVLNRATD 173
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+ + L Q + SG+ D C+RL+GLP
Sbjct: 174 P--------------------KQMILPPPPIAQLPPLLPQHIITSGTRKD--CVRLRGLP 211
Query: 152 YECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENA 197
YE E + +F+ IV G+ + ++ G+ +G A+IQ + +A
Sbjct: 212 YEALVEHILEFMGEHSKNIVYQGVHMVYNAQGQPSGEAFIQMDSEASA 259
>gi|296803341|gb|ADH51734.1| ESRP1/RAF1 fusion protein [Homo sapiens]
Length = 1061
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVY--- 298
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
+A G G S ++QFL+K
Sbjct: 299 -----KATGEDFLKIAGGTSNE-------VAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 106/256 (41%), Gaps = 47/256 (18%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++ R +
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSS 418
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
TP + + QF+ R C+RL+GLP
Sbjct: 419 APLIPLPTPPIIPVLP-QQFVPPTNVRD------------------------CIRLRGLP 453
Query: 152 YECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YAATIEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM 513
Query: 209 GHRLVTLVMSGAQWF-------------LSPP---LTNETPISRLDLTGSPVRSTICVLC 252
R V + A+ LSPP L +P S + V T +
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 573
Query: 253 HP---LTPRSVRPRSV 265
P L PR+++P +
Sbjct: 574 QPSVILNPRALQPSTA 589
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGTRYIEVYKATGEDFL 306
>gi|195488502|ref|XP_002092343.1| GE14142 [Drosophila yakuba]
gi|194178444|gb|EDW92055.1| GE14142 [Drosophila yakuba]
Length = 889
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 76/186 (40%), Gaps = 47/186 (25%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR +GEA + F + AL+RHK ++G RYIE+Y G
Sbjct: 317 GRRNGEALIRFECQEHRDMALKRHKHHIGSRYIEVYRASG-------------------- 356
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
FLA + ++ A LS A Q +R++GLPY+ + V
Sbjct: 357 ---------EDFLAIAGGASNEAQ---------AFLSKGA--QVIIRMRGLPYDATAKQV 396
Query: 160 EKFLEGLEIVP-------NGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRL 212
F + P G+ GR TG A++ F + +A KAL RH+E IG R
Sbjct: 397 LDFFTAGDTPPCHVLDGNEGVLFVKKPDGRATGDAFVLFAHESDASKALCRHRESIGQRY 456
Query: 213 VTLVMS 218
+ L S
Sbjct: 457 IELFRS 462
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 80/186 (43%), Gaps = 20/186 (10%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+L + GR++G+A V F+ DA +AL RH+ ++G RYIEL+ ++ R
Sbjct: 417 VLFVKKPDGRATGDAFVLFAHESDASKALCRHRESIGQRYIELFRSTTAEVQQVLNRSMD 476
Query: 92 G----FGGVKSTP--------------YGVGIFCISQFLAKWMRRAKRSEMDWALKRQGA 133
GG S P VG +S L AL
Sbjct: 477 PKNYESGGGHSQPPLIAQLPTMQLPLLPQVGAHSLSHSLGASPANLCPPVPPPALPLPTQ 536
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQF 191
L S + C+RL+GLPYE E + FL+ I+ G+ + + G+ +G A+IQ
Sbjct: 537 HLITSGTTKNCIRLRGLPYEAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQM 596
Query: 192 VDKENA 197
+E+A
Sbjct: 597 DLEESA 602
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
C +R +GLP++ +D+ KF GL + G+ + GR G A I+F +E+ + AL
Sbjct: 278 NCIVRARGLPWQSSDQDIAKFFRGLNVAKGGVALCLSPLGRRNGEALIRFECQEHRDMAL 337
Query: 202 LRHKEKIGHRLVTLVMSGAQWFLS 225
RHK IG R + + + + FL+
Sbjct: 338 KRHKHHIGSRYIEVYRASGEDFLA 361
>gi|119612126|gb|EAW91720.1| RNA binding motif protein 35A, isoform CRA_a [Homo sapiens]
Length = 503
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 82 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 141
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 142 GEDFLKIAG-GTSN--------------EVAQFLSKE----------------------- 163
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 164 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 218
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 219 CEEYAQNALRKHKDLLGKRYIELFRSTA 246
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 109/256 (42%), Gaps = 47/256 (18%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 199 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQ------- 251
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 252 ---------------VLNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNVRD--CIRLRGLP 293
Query: 152 YECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 294 YAATIEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM 353
Query: 209 GHRLVTLVMSGAQWF-------------LSPP---LTNETPISRLDLTGSPVRSTICVLC 252
R V + A+ LSPP L +P S + V T +
Sbjct: 354 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 413
Query: 253 HP---LTPRSVRPRSV 265
P L PR+++P +
Sbjct: 414 QPSVILNPRALQPSTA 429
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 63 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 122
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 123 LQRHKHHMGTRYIEVYKATGEDFL 146
>gi|432101444|gb|ELK29626.1| Cysteine desulfurase, mitochondrial [Myotis davidii]
Length = 815
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 27/189 (14%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
F+ IV +I + G+++GE VEF + D + AL RHK MG+R+I+++ +
Sbjct: 394 FYLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----PIT 449
Query: 83 KEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQ 142
K+ G+ + K ++ + + L +G V S +
Sbjct: 450 KK-------------------GMLEKIDMIRKRLQNFNYDQREMMLNPEGDVSS----TK 486
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K+
Sbjct: 487 VCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSER 546
Query: 203 RHKEKIGHR 211
H++K+ R
Sbjct: 547 LHRKKLNGR 555
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 739 TVIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVI 798
Query: 203 RHKEK-IGHRLVTLVM 217
++ IG R V LV+
Sbjct: 799 DLNDRPIGSRKVKLVL 814
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 166 LEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGAQWFLS 225
L+IV + I I + G+ TG +++F ++ + + AL RHK+ +G+R + +
Sbjct: 396 LDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQV---------- 445
Query: 226 PPLTNETPISRLDL 239
P+T + + ++D+
Sbjct: 446 HPITKKGMLEKIDM 459
>gi|194208736|ref|XP_001498922.2| PREDICTED: epithelial splicing regulatory protein 2-like [Equus
caballus]
Length = 659
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 87/202 (43%), Gaps = 35/202 (17%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIEL+
Sbjct: 309 FLGPECPVTGGADGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRS 368
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ R S+P + + L A +E D
Sbjct: 369 TAAEVQQVLNR-------YASSPLLPTV--TAPLLPIPFPLAAGTERD------------ 407
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ E
Sbjct: 408 ------CVRLRGLPYTATIEDILSFLGEAAADIQPHGVHMVLNQQGRPSGDAFIQMTSAE 461
Query: 196 NAEKALLR-HKEKIGHRLVTLV 216
A A R HK+ + R V +V
Sbjct: 462 RALGAAQRCHKKVMKERYVEVV 483
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 90/208 (43%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYM 76
++FFK I + L + GR +GEA + F VD QR ALQRHK +MG RYIE+Y
Sbjct: 206 ARFFKGLNIARGGVALCLNAQGRRNGEALIRF--VDSEQRDLALQRHKHHMGVRYIEVYK 263
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
G + G GT +++FL++
Sbjct: 264 ATGEEFVKIAG-GTS--------------LEVARFLSRE--------------------- 287
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFV 192
DQ +RL+GLP+ DV FL G E +G+ GR TG A+ F
Sbjct: 288 ----DQVILRLRGLPFSAGPADVLGFL-GPECPVTGGADGLLFVRHPDGRPTGDAFALFA 342
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL RHK +G R + L S A
Sbjct: 343 CEELAQAALRRHKGMLGKRYIELFRSTA 370
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +DV +F +GL I G+ + + GR G A I+FVD E + AL
Sbjct: 188 ETVVRARGLPWQSSDQDVARFFKGLNIARGGVALCLNAQGRRNGEALIRFVDSEQRDLAL 247
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + F+
Sbjct: 248 QRHKHHMGVRYIEVYKATGEEFV 270
>gi|149061069|gb|EDM11679.1| similar to hypothetical protein FLJ20171 (predicted) [Rattus
norvegicus]
Length = 604
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 121/300 (40%), Gaps = 75/300 (25%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVY--- 298
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
+A G G S ++QFL+K
Sbjct: 299 -----KATGEDFLKIAGGTSNE-------VAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA-------QWFLSPPLTNETPISRLDLTGSPVR 245
+E A+ AL +HK+ +G R + L S A F S PL + L +P+
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAPL--------IPLPTAPI- 429
Query: 246 STICVLCHPLTPRS-----VRPRSVRQSEHEWWALARLGSFLIS-RTHQIIIPRSYHRRP 299
I VL P + VR R + + L LG F RTH + + ++ RP
Sbjct: 430 --IPVLPQQFVPPTNVRDCVRLRGLPYAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRP 487
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 84/196 (42%), Gaps = 34/196 (17%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++ R
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNR--- 415
Query: 92 GFGGVKSTPYGVG-IFCI--SQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQ 148
F P I + QF+ R C+RL+
Sbjct: 416 -FSSAPLIPLPTAPIIPVLPQQFVPPTNVRD------------------------CVRLR 450
Query: 149 GLPYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HK 205
GLPY ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK
Sbjct: 451 GLPYAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHK 510
Query: 206 EKIGHRLVTLVMSGAQ 221
+ + R V + A+
Sbjct: 511 KTMKDRYVEVFQCSAE 526
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + AL RH
Sbjct: 227 VRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRH 286
Query: 205 KEKIGHRLVTLVMSGAQWFL 224
K +G R + + + + FL
Sbjct: 287 KHHMGTRYIEVYKATGEDFL 306
>gi|395512150|ref|XP_003760307.1| PREDICTED: epithelial splicing regulatory protein 1 [Sarcophilus
harrisii]
Length = 550
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 90/208 (43%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG+RYIE+Y
Sbjct: 241 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGNRYIEVY--- 297
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
+A G G S ++QFL+K
Sbjct: 298 -----KATGEDFLKIAGGTSNE-------VAQFLSKE----------------------- 322
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 323 --NQVIVRMRGLPFTATAEEVLAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 377
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 378 CEEYAQNALRKHKDLLGKRYIELFRSTA 405
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 222 DNTIVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 281
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G+R + + + + FL
Sbjct: 282 LQRHKHHMGNRYIEVYKATGEDFL 305
>gi|307181801|gb|EFN69244.1| RNA-binding protein 35A [Camponotus floridanus]
Length = 762
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 84/197 (42%), Gaps = 54/197 (27%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ L GR +GEA V F + + AL+RHK +MG RYIE+Y +A+G
Sbjct: 217 VALCLSPMGRRNGEALVRFINKEHRDMALKRHKHHMGPRYIEVY--------KASGEDFV 268
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
G G S A LS A Q +R++GLP
Sbjct: 269 GIAGGTS------------------------------GEAHAFLSRGA--QVIVRMRGLP 296
Query: 152 YECKKEDVEKF----------LEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
Y+C + V +F L+G E G+ GR TG A++ F +E+A KAL
Sbjct: 297 YDCIAKQVLEFFQSGQKPCQVLDGEE----GVLFVKKPDGRATGDAFVLFAKEEDAVKAL 352
Query: 202 LRHKEKIGHRLVTLVMS 218
+H++ IG R + L S
Sbjct: 353 SKHRDLIGSRYIELFRS 369
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 48/84 (57%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C +R +GLP++ +D+ KF GL + G+ + GR G A ++F++KE+ + A
Sbjct: 185 NDCVVRARGLPWQSSDQDIAKFFRGLNVAKGGVALCLSPMGRRNGEALVRFINKEHRDMA 244
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + F+
Sbjct: 245 LKRHKHHMGPRYIEVYKASGEDFV 268
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 103/250 (41%), Gaps = 55/250 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+L + GR++G+A V F+ +DA +AL +H+ +G RYIEL+ ++ R T
Sbjct: 324 VLFVKKPDGRATGDAFVLFAKEEDAVKALSKHRDLIGSRYIELFRSTTAEVQQVLNRATD 383
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+ + L Q + SG+ D C+RL+GLP
Sbjct: 384 P--------------------KQVILPPPPITQLPPLLPQHIITSGTRKD--CVRLRGLP 421
Query: 152 YECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIG 209
YE E + +F+ IV G+ + ++ G+ +G A+IQ +D E + A +
Sbjct: 422 YEALVEHILEFMGEHSKNIVYQGVHMVYNAQGQPSGEAFIQ-MDSEASAYACASQRH--- 477
Query: 210 HRLVT-------------------LVMSGAQWFLSPPLTNETPISRLDLTGSPVRSTICV 250
HR +T LV++GA ++PP T L G+ T
Sbjct: 478 HRYMTYGKKQRYIEVFQCSGDDMNLVLTGA---VTPPSTKA-----LLSPGTLTTQTSAT 529
Query: 251 LCHPLTPRSV 260
HP P ++
Sbjct: 530 FTHPSAPTAM 539
>gi|20521648|dbj|BAA34485.2| KIAA0765 protein [Homo sapiens]
Length = 952
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 13/184 (7%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ LL D GR++G V+F S D AL+R++ M RY+E+ + + E G
Sbjct: 352 VHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-----SPATERQWVAAG 406
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
G K +G + + + R+K + + +G C+ L+GLP
Sbjct: 407 GHITFKQN---MGPSGQTHPPPQTLPRSKSPSGQKRSRSRSPHEAG-----FCVYLKGLP 458
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL RHK+ +G+R
Sbjct: 459 FEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNR 518
Query: 212 LVTL 215
+ +
Sbjct: 519 FIQV 522
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 469 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----P 524
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 525 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMILNPEGDVNSA--- 562
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K+
Sbjct: 563 -KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKS 621
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 622 ERLHRKKLNGR 632
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++
Sbjct: 23 VVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMM 78
Query: 203 RHKEKIGHRLVTLVMS 218
R I VTL++S
Sbjct: 79 RTGGTIKGSKVTLLLS 94
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 876 TVIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVI 935
Query: 203 RHKEK-IGHRLVTLVM 217
++ IG R V LV+
Sbjct: 936 DLNDRPIGSRKVKLVL 951
>gi|441647515|ref|XP_003268407.2| PREDICTED: epithelial splicing regulatory protein 1 [Nomascus
leucogenys]
Length = 821
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 404 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 463
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 464 GEDFLKIAG-GTSNE--------------VAQFLSK------------------------ 484
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 485 -ENQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 540
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 541 CEEYAQNALRKHKDLLGKRYIELFRSTA 568
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 28/193 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++ R +
Sbjct: 521 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSS 580
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
TP + + QF+ R C+RL+GLP
Sbjct: 581 APLIPLPTPPIIPVL-PQQFVPPTNVRD------------------------CIRLRGLP 615
Query: 152 YECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 616 YAATIEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM 675
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 676 KDRYVEVFQCSAE 688
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 385 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 444
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 445 LQRHKHHMGTRYIEVYKATGEDFL 468
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELYMEEGT 80
+F I + ++ + GR SG+A ++ S D A A Q+ HK NM DRY+E++
Sbjct: 629 EFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQ---C 685
Query: 81 SSKEANGRGTGG 92
S++E N GG
Sbjct: 686 SAEEMNFVLMGG 697
>gi|184185561|gb|ACC68959.1| RNA-binding protein 12 (predicted) [Rhinolophus ferrumequinum]
Length = 946
Score = 67.4 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 54/217 (24%), Positives = 102/217 (47%), Gaps = 23/217 (10%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF + + LL D GR++G V+F S D AL+R++ M RY+E+ + +
Sbjct: 323 FFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-----SPA 377
Query: 83 KEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQ 142
E GG K + +G + + + R+K + + G
Sbjct: 378 TERQWVAAGGHITFKQS---IGPSGQTHPPPQTLPRSKSPSGQKRSRSRSPHEPGF---- 430
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
C+ L+GLP+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL
Sbjct: 431 -CVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALS 489
Query: 203 RHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDL 239
RHK+ +G+R + + P+T + + ++D+
Sbjct: 490 RHKQYMGNRFIQV----------HPITKKGMLEKIDM 516
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALSRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMMLNPEGDVSS---- 541
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K+
Sbjct: 542 TKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 ERLHRKKLNGR 612
Score = 40.0 bits (92), Expect = 1.4, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 872 IKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDL 931
Query: 205 KEK-IGHRLVTLVM 217
++ IG R V LV+
Sbjct: 932 NDRPIGSRKVKLVL 945
Score = 39.7 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++R
Sbjct: 5 IRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMMRT 60
Query: 205 KEKIGHRLVTLVMS 218
I VTL++S
Sbjct: 61 GGTIKGSKVTLLLS 74
>gi|50949507|emb|CAH10603.1| hypothetical protein [Homo sapiens]
Length = 954
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 13/184 (7%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ LL D GR++G V+F S D AL+R++ M RY+E+ + + E G
Sbjct: 354 VHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-----SPATERQWVAAG 408
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
G K +G + + + R+K + + +G C+ L+GLP
Sbjct: 409 GHITFKQN---MGPSGQTHPPPQTLPRSKSPSGQKRSRSRSPHEAG-----FCVYLKGLP 460
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL RHK+ +G+R
Sbjct: 461 FEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNR 520
Query: 212 LVTL 215
+ +
Sbjct: 521 FIQV 524
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 471 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----P 526
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 527 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMILNPEGDVNSA--- 564
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K+
Sbjct: 565 -KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKS 623
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 624 ERLHRKKLNGR 634
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++
Sbjct: 25 VVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMM 80
Query: 203 RHKEKIGHRLVTLVMS 218
R I VTL++S
Sbjct: 81 RTGGTIKGSKVTLLLS 96
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 878 TVIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVI 937
Query: 203 RHKEK-IGHRLVTLVM 217
++ IG R V LV+
Sbjct: 938 DLNDRPIGSRKVKLVL 953
>gi|189230098|ref|NP_001121036.2| epithelial splicing regulatory protein 1 [Rattus norvegicus]
gi|187469151|gb|AAI66735.1| RGD1560481 protein [Rattus norvegicus]
Length = 659
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 121/300 (40%), Gaps = 75/300 (25%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 301
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 302 GEDFLKIAG-GTSN--------------EVAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA-------QWFLSPPLTNETPISRLDLTGSPVR 245
+E A+ AL +HK+ +G R + L S A F S PL + L +P+
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAPL--------IPLPTAPI- 429
Query: 246 STICVLCHPLTPRS-----VRPRSVRQSEHEWWALARLGSFLIS-RTHQIIIPRSYHRRP 299
I VL P + VR R + + L LG F RTH + + ++ RP
Sbjct: 430 --IPVLPQQFVPPTNVRDCVRLRGLPYAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRP 487
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 84/196 (42%), Gaps = 34/196 (17%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++ R
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNR--- 415
Query: 92 GFGGVKSTPYGVG-IFCI--SQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQ 148
F P I + QF+ R C+RL+
Sbjct: 416 -FSSAPLIPLPTAPIIPVLPQQFVPPTNVRD------------------------CVRLR 450
Query: 149 GLPYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HK 205
GLPY ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK
Sbjct: 451 GLPYAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHK 510
Query: 206 EKIGHRLVTLVMSGAQ 221
+ + R V + A+
Sbjct: 511 KTMKDRYVEVFQCSAE 526
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + AL RH
Sbjct: 227 VRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRH 286
Query: 205 KEKIGHRLVTLVMSGAQWFL 224
K +G R + + + + FL
Sbjct: 287 KHHMGTRYIEVYKATGEDFL 306
>gi|345308102|ref|XP_001505380.2| PREDICTED: epithelial splicing regulatory protein 2-like
[Ornithorhynchus anatinus]
Length = 729
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 83/193 (43%), Gaps = 45/193 (23%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ L + GR +GEA V F + D AL+RHK +MG RYIE+Y G + G GT
Sbjct: 276 VALCLNAQGRRNGEALVRFVNSDHRDLALERHKHHMGSRYIEVYKATGDEFLKIAG-GTS 334
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++QFL++ +Q +RL+GLP
Sbjct: 335 NE--------------VAQFLSRE-------------------------NQVIIRLRGLP 355
Query: 152 YECKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEK 207
+ +DV FL G E P G+ GR TG A+ F ++ A+ AL RHK
Sbjct: 356 FSATPDDVLGFL-GPECPVTGGPEGLLFVRYPDGRPTGDAFALFACEDAAQSALRRHKGI 414
Query: 208 IGHRLVTLVMSGA 220
+G R + L S A
Sbjct: 415 LGKRYIELFRSTA 427
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 90/199 (45%), Gaps = 32/199 (16%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ D AQ AL+RHK +G RYIEL+
Sbjct: 366 FLGPECPVTGGPEGLLFVRYPDGRPTGDAFALFACEDAAQSALRRHKGILGKRYIELFRS 425
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ ++++L+ + + L A L+G
Sbjct: 426 TAAEVQQ----------------------VLNRYLSAPLIPTLPPPLLPVLPPPYA-LAG 462
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
S V C +RL+GLPY +DV F+ +I P+G+ + + GR +G A+IQ E
Sbjct: 463 SCVRDC-VRLRGLPYTAGIDDVLDFMGEATADIRPHGVHMVLNQQGRPSGDAFIQMKSAE 521
Query: 196 NAEKALLR-HKEKIGHRLV 213
A+ A R HK+ + R V
Sbjct: 522 RAQVAAQRCHKKMMKERYV 540
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%)
Query: 136 SGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
S S + +R +GLP++ + + +F GL I G+ + + GR G A ++FV+ +
Sbjct: 239 SESVDSETVIRARGLPWQSSDQHIARFFIGLNIAKGGVALCLNAQGRRNGEALVRFVNSD 298
Query: 196 NAEKALLRHKEKIGHRLVTLVMSGAQWFL 224
+ + AL RHK +G R + + + FL
Sbjct: 299 HRDLALERHKHHMGSRYIEVYKATGDEFL 327
>gi|346703322|emb|CBX25419.1| hypothetical_protein [Oryza glaberrima]
Length = 291
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 92/199 (46%), Gaps = 25/199 (12%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY--MEEG 79
+FF + V+ LL+ + GR +GEA V F S A+ AL R++ NMG RY+E++ ++
Sbjct: 102 KFFVGLDIVDCLLVHKN-GRFTGEAFVVFPSAMQAEFALHRNRQNMGRRYVEVFRCKKQE 160
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA 139
S A GGF F +++ R + + + +
Sbjct: 161 YYSAIAAEVNQGGF-----------------FDSEY-RHSPPPPRPKKPAEDKSSMEYTE 202
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
V ++L+GLPY ED+ KF E+ + I + G+ TG A+++F E A+
Sbjct: 203 V----LKLRGLPYSATTEDIIKFFVEYELTEENVHIAYRPDGKATGEAFVEFPTAEVAKT 258
Query: 200 ALLRHKEKIGHRLVTLVMS 218
A+ + K IG R V L S
Sbjct: 259 AMCKDKMTIGTRYVELFPS 277
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 132 GAVLSGSAVDQCC-----MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGV 186
GA L G+ + +RL+GLP++C D+ KF GL+IV + H GR TG
Sbjct: 68 GANLPGAGANSAIQNFPGVRLRGLPFDCDDLDICKFFVGLDIV--DCLLVHK-NGRFTGE 124
Query: 187 AYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGAQWFLS 225
A++ F AE AL R+++ +G R V + Q + S
Sbjct: 125 AFVVFPSAMQAEFALHRNRQNMGRRYVEVFRCKKQEYYS 163
>gi|354484335|ref|XP_003504344.1| PREDICTED: epithelial splicing regulatory protein 2 [Cricetulus
griseus]
Length = 707
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 86/202 (42%), Gaps = 35/202 (17%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIEL+
Sbjct: 357 FLGPECPVTGGADGLLFVRHPDGRPTGDAFALFACEEQAQAALRRHKGMLGKRYIELFRS 416
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
+ Q L ++ + L L+G
Sbjct: 417 TAAE--------------------------VQQVLNRYATSPLLPTLTAPLLPIPFPLAG 450
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ + E
Sbjct: 451 -GTGRDCVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMMSSE 509
Query: 196 NAEKALLR-HKEKIGHRLVTLV 216
A A R HK+ + R V +V
Sbjct: 510 RALAAAQRCHKKVMKERYVEVV 531
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 87/206 (42%), Gaps = 47/206 (22%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I + L + GR +GEA + F + ALQRHK +MG RYIE+Y
Sbjct: 254 ARFFKGLNIARGGVALCLNAQGRRNGEALIRFEDSEQRDLALQRHKHHMGVRYIEVYKAT 313
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT +++FL++
Sbjct: 314 GEEFVKIAG-GTS--------------LEVARFLSRE----------------------- 335
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFVDK 194
DQ +RL+GLP+ DV FL G E +G+ GR TG A+ F +
Sbjct: 336 --DQVILRLRGLPFSAGPTDVLGFL-GPECPVTGGADGLLFVRHPDGRPTGDAFALFACE 392
Query: 195 ENAEKALLRHKEKIGHRLVTLVMSGA 220
E A+ AL RHK +G R + L S A
Sbjct: 393 EQAQAALRRHKGMLGKRYIELFRSTA 418
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
++ +R +GLP++ +DV +F +GL I G+ + + GR G A I+F D E + A
Sbjct: 235 NETVVRARGLPWQSSDQDVARFFKGLNIARGGVALCLNAQGRRNGEALIRFEDSEQRDLA 294
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + F+
Sbjct: 295 LQRHKHHMGVRYIEVYKATGEEFV 318
>gi|413946699|gb|AFW79348.1| hypothetical protein ZEAMMB73_203104 [Zea mays]
Length = 242
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 90/199 (45%), Gaps = 24/199 (12%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY--MEEG 79
+FF + V+ LL+ + GR +GEA V F + + AL R++ NMG RY+E++ ++
Sbjct: 52 KFFVGLDIVDCLLVNKN-GRFTGEAFVVFPTAMQTEFALHRNRQNMGRRYVEVFRCKKQE 110
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA 139
S AN GG+ + +RS ++ A GS
Sbjct: 111 YYSAIANEVSQGGY---------------------FESECRRSSPPPRPPKKTAEDKGSM 149
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
++L+GLPY ED+ KF E+ + I G+ TG A+++F E A+
Sbjct: 150 EYTEVLKLRGLPYSATTEDIIKFFLEYELTEENVHIAIRSDGKATGEAFVEFPTAEVAKT 209
Query: 200 ALLRHKEKIGHRLVTLVMS 218
A+ + K IG R V L S
Sbjct: 210 AMCKDKMTIGTRYVELFPS 228
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RL+GLP++C D+ KF GL+IV + + GR TG A++ F E AL R+
Sbjct: 36 VRLRGLPFDCNDIDICKFFVGLDIVD---CLLVNKNGRFTGEAFVVFPTAMQTEFALHRN 92
Query: 205 KEKIGHRLVTLVMSGAQWFLSPPLTNE 231
++ +G R V + Q + S + NE
Sbjct: 93 RQNMGRRYVEVFRCKKQEYYS-AIANE 118
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 30 VNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRG 89
V+I + +D G+++GEA VEF + + A+ A+ + K +G RY+EL+ + A RG
Sbjct: 183 VHIAIRSD--GKATGEAFVEFPTAEVAKTAMCKDKMTIGTRYVELFPSTPEEASRARTRG 240
>gi|229485495|sp|B2RYD2.2|ESRP1_RAT RecName: Full=Epithelial splicing regulatory protein 1; AltName:
Full=RNA-binding motif protein 35A; AltName:
Full=RNA-binding protein 35A
Length = 677
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 121/300 (40%), Gaps = 75/300 (25%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 301
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 302 GEDFLKIAG-GTSN--------------EVAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA-------QWFLSPPLTNETPISRLDLTGSPVR 245
+E A+ AL +HK+ +G R + L S A F S PL + L +P+
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAPL--------IPLPTAPI- 429
Query: 246 STICVLCHPLTPRS-----VRPRSVRQSEHEWWALARLGSFLIS-RTHQIIIPRSYHRRP 299
I VL P + VR R + + L LG F RTH + + ++ RP
Sbjct: 430 --IPVLPQQFVPPTNVRDCVRLRGLPYAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRP 487
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 84/196 (42%), Gaps = 34/196 (17%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++ R
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNR--- 415
Query: 92 GFGGVKSTPYGVG-IFCI--SQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQ 148
F P I + QF+ R C+RL+
Sbjct: 416 -FSSAPLIPLPTAPIIPVLPQQFVPPTNVRD------------------------CVRLR 450
Query: 149 GLPYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HK 205
GLPY ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK
Sbjct: 451 GLPYAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHK 510
Query: 206 EKIGHRLVTLVMSGAQ 221
+ + R V + A+
Sbjct: 511 KTMKDRYVEVFQCSAE 526
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + AL RH
Sbjct: 227 VRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRH 286
Query: 205 KEKIGHRLVTLVMSGAQWFL 224
K +G R + + + + FL
Sbjct: 287 KHHMGTRYIEVYKATGEDFL 306
>gi|238013930|gb|ACR38000.1| unknown [Zea mays]
gi|413946698|gb|AFW79347.1| RNA binding protein [Zea mays]
Length = 295
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 90/199 (45%), Gaps = 24/199 (12%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY--MEEG 79
+FF + V+ LL+ + GR +GEA V F + + AL R++ NMG RY+E++ ++
Sbjct: 105 KFFVGLDIVDCLLVNKN-GRFTGEAFVVFPTAMQTEFALHRNRQNMGRRYVEVFRCKKQE 163
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA 139
S AN GG+ + +RS ++ A GS
Sbjct: 164 YYSAIANEVSQGGY---------------------FESECRRSSPPPRPPKKTAEDKGSM 202
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
++L+GLPY ED+ KF E+ + I G+ TG A+++F E A+
Sbjct: 203 EYTEVLKLRGLPYSATTEDIIKFFLEYELTEENVHIAIRSDGKATGEAFVEFPTAEVAKT 262
Query: 200 ALLRHKEKIGHRLVTLVMS 218
A+ + K IG R V L S
Sbjct: 263 AMCKDKMTIGTRYVELFPS 281
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RL+GLP++C D+ KF GL+IV + + GR TG A++ F E AL R+
Sbjct: 89 VRLRGLPFDCNDIDICKFFVGLDIVD---CLLVNKNGRFTGEAFVVFPTAMQTEFALHRN 145
Query: 205 KEKIGHRLVTLVMSGAQWFLSPPLTNE 231
++ +G R V + Q + S + NE
Sbjct: 146 RQNMGRRYVEVFRCKKQEYYS-AIANE 171
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 31 NILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRG 89
N+ + G+++GEA VEF + + A+ A+ + K +G RY+EL+ + A RG
Sbjct: 235 NVHIAIRSDGKATGEAFVEFPTAEVAKTAMCKDKMTIGTRYVELFPSTPEEASRARTRG 293
>gi|351713464|gb|EHB16383.1| Epithelial splicing regulatory protein 1 [Heterocephalus glaber]
Length = 677
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 236 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 295
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 296 GEDFLKIAG-GTSNE--------------VAQFLSKE----------------------- 317
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 318 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 372
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 373 CEEYAQNALRKHKDLLGKRYIELFRSTA 400
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 26/193 (13%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+
Sbjct: 353 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELF---------------- 396
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+ST V + + + + + Q V + D C+RL+GLP
Sbjct: 397 -----RSTAAEVQVVQVLNRFSSAPLIPLPTPPIIPVLPQQFVPPTNVRD--CIRLRGLP 449
Query: 152 YECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 450 YAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMASQKCHKKTM 509
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 510 KDRYVEVFQCSAE 522
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 217 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 276
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 277 LQRHKHHMGTRYIEVYKATGEDFL 300
>gi|344253993|gb|EGW10097.1| Epithelial splicing regulatory protein 2 [Cricetulus griseus]
Length = 697
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 86/202 (42%), Gaps = 35/202 (17%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIEL+
Sbjct: 347 FLGPECPVTGGADGLLFVRHPDGRPTGDAFALFACEEQAQAALRRHKGMLGKRYIELFRS 406
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
+ Q L ++ + L L+G
Sbjct: 407 TAAE--------------------------VQQVLNRYATSPLLPTLTAPLLPIPFPLAG 440
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ + E
Sbjct: 441 -GTGRDCVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMMSSE 499
Query: 196 NAEKALLR-HKEKIGHRLVTLV 216
A A R HK+ + R V +V
Sbjct: 500 RALAAAQRCHKKVMKERYVEVV 521
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 87/206 (42%), Gaps = 47/206 (22%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I + L + GR +GEA + F + ALQRHK +MG RYIE+Y
Sbjct: 244 ARFFKGLNIARGGVALCLNAQGRRNGEALIRFEDSEQRDLALQRHKHHMGVRYIEVYKAT 303
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT +++FL++
Sbjct: 304 GEEFVKIAG-GTS--------------LEVARFLSRE----------------------- 325
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFVDK 194
DQ +RL+GLP+ DV FL G E +G+ GR TG A+ F +
Sbjct: 326 --DQVILRLRGLPFSAGPTDVLGFL-GPECPVTGGADGLLFVRHPDGRPTGDAFALFACE 382
Query: 195 ENAEKALLRHKEKIGHRLVTLVMSGA 220
E A+ AL RHK +G R + L S A
Sbjct: 383 EQAQAALRRHKGMLGKRYIELFRSTA 408
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
++ +R +GLP++ +DV +F +GL I G+ + + GR G A I+F D E + A
Sbjct: 225 NETVVRARGLPWQSSDQDVARFFKGLNIARGGVALCLNAQGRRNGEALIRFEDSEQRDLA 284
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + F+
Sbjct: 285 LQRHKHHMGVRYIEVYKATGEEFV 308
>gi|190402267|gb|ACE77677.1| RNA binding motif protein 12, isoform 1 (predicted) [Sorex araneus]
Length = 1520
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 13/184 (7%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ LL D GR++G V+F S D AL+R++ M RY+E+ + + E G
Sbjct: 332 VHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-----SPATERQWVAAG 386
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
G K + +G + + + R+K + + +G C+ L+GLP
Sbjct: 387 GHITFKQS---MGPSGQTHPPPQTLPRSKSPSGQKRSRSRSPHEAG-----FCVYLKGLP 438
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL RHK+ +G R
Sbjct: 439 FEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGSR 498
Query: 212 LVTL 215
+ +
Sbjct: 499 FIQV 502
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGSRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMMLNPEGDVSSA--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K+
Sbjct: 543 -KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 ERLHRKKLNGR 612
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++
Sbjct: 3 VVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMM 58
Query: 203 RHKEKIGHRLVTLVMS 218
R I VTL++S
Sbjct: 59 RTGGTIKGSKVTLLLS 74
>gi|7020094|dbj|BAA90992.1| unnamed protein product [Homo sapiens]
Length = 358
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 82 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVY--- 138
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
+A G G S ++QFL+K
Sbjct: 139 -----KATGEDFLKIAGGTSNE-------VAQFLSKE----------------------- 163
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 164 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 218
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 219 CEEYAQNALRKHKDLLGKRYIELFRSTA 246
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 63 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 122
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 123 LQRHKHHMGTRYIEVYKATGEDFL 146
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 87/193 (45%), Gaps = 33/193 (17%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF P+ IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+
Sbjct: 185 FFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRS 244
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ +++F + + + L +Q V
Sbjct: 245 TAAEVQQ----------------------VLNRFSSAPLIPLPTPPIIPVLPQQ-FVPPT 281
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ D C+RL+GLPY ED+ FL +I +G+ + ++ GR +G A+IQ +
Sbjct: 282 NVRD--CIRLRGLPYAATIEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSAD 339
Query: 196 NAEKALLR-HKEK 207
A A + HK+K
Sbjct: 340 RAFMAAQKCHKKK 352
>gi|85700309|gb|AAI12044.1| ESRP1 protein [Homo sapiens]
Length = 392
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 89 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVY--- 145
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
+A G G S ++QFL+K
Sbjct: 146 -----KATGEDFLKIAGGTSNE-------VAQFLSKE----------------------- 170
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 171 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 225
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 226 CEEYAQNALRKHKDLLGKRYIELFRSTA 253
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 33/207 (15%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF P+ IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+
Sbjct: 192 FFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRS 251
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ +++F + + + L +Q V
Sbjct: 252 TAAEVQQ----------------------VLNRFSSAPLIPLPTPPIIPVLPQQ-FVPPT 288
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ D C+RL+GLPY ED+ FL +I +G+ + ++ GR +G A+IQ +
Sbjct: 289 NVRD--CIRLRGLPYAATIEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSAD 346
Query: 196 NAEKALLR-HKEKIGHRLVTLVMSGAQ 221
A A + HK+ + R V + A+
Sbjct: 347 RAFMAAQKCHKKNMKDRYVEVFQCSAE 373
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 70 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 129
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 130 LQRHKHHMGTRYIEVYKATGEDFL 153
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELYMEEGT 80
+F I + ++ + GR SG+A ++ S D A A Q+ HK NM DRY+E++
Sbjct: 314 EFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQ---C 370
Query: 81 SSKEANGRGTGG 92
S++E N GG
Sbjct: 371 SAEEMNFVLMGG 382
>gi|34192605|gb|AAH19932.1| ESRP1 protein [Homo sapiens]
Length = 656
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 290 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 349
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 350 GEDFLKIAG-GTSNE--------------VAQFLSKE----------------------- 371
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 372 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 426
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 427 CEEYAQNALRKHKDLLGKRYIELFRSTA 454
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 106/256 (41%), Gaps = 47/256 (18%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++ R +
Sbjct: 407 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSS 466
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
TP + + QF+ R C+RL+GLP
Sbjct: 467 APLIPLPTPPIIPVL-PQQFVPPTNVRD------------------------CIRLRGLP 501
Query: 152 YECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 502 YAATIEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM 561
Query: 209 GHRLVTLVMSGAQWF-------------LSPP---LTNETPISRLDLTGSPVRSTICVLC 252
R V + A+ LSPP L +P S + V T +
Sbjct: 562 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 621
Query: 253 HP---LTPRSVRPRSV 265
P L PR+++P +
Sbjct: 622 QPSVILNPRALQPSTA 637
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 271 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 330
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 331 LQRHKHHMGTRYIEVYKATGEDFL 354
>gi|440905418|gb|ELR55795.1| Epithelial splicing regulatory protein 2, partial [Bos grunniens
mutus]
Length = 759
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 92/214 (42%), Gaps = 44/214 (20%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYM 76
++FFK I + L + GR +GEA + F VD QR ALQRHK +MG RYIE+Y
Sbjct: 299 ARFFKGLNIARGGVALCLNAQGRRNGEALIRF--VDSEQRDLALQRHKHHMGVRYIEVYK 356
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
G E + GG P +++FL++
Sbjct: 357 ATG----EEFVKIAGGDSHAPPPP----PLEVARFLSRE--------------------- 387
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFV 192
DQ +RL+GLP+ DV FL G E +G+ GR TG A+ F
Sbjct: 388 ----DQVILRLRGLPFSAGPADVLGFL-GPECPVTGGADGLLFVRHPDGRPTGDAFALFA 442
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGAQWFLSP 226
+E A+ AL RHK +G R + L S A P
Sbjct: 443 CEELAQAALRRHKGMLGKRYIELFRSTAAEVQQP 476
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 85/202 (42%), Gaps = 35/202 (17%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIEL+
Sbjct: 409 FLGPECPVTGGADGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRS 468
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ F S L A +G
Sbjct: 469 TAAEVQQPAAS-----------------FPSSPLLPTLTAPLLPIPFPLA--------AG 503
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ D C+RL+GLPY ED+ FL ++I P+G+ + + GR +G A+IQ E
Sbjct: 504 TGRD--CVRLRGLPYTATIEDILSFLGEAAVDIRPHGVHMVLNQQGRPSGDAFIQMTSAE 561
Query: 196 NAEKALLR-HKEKIGHRLVTLV 216
A A R HK+ + R V +V
Sbjct: 562 RALAAAQRCHKKAMKERYVEVV 583
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +DV +F +GL I G+ + + GR G A I+FVD E + AL
Sbjct: 281 ETVVRARGLPWQSSDQDVARFFKGLNIARGGVALCLNAQGRRNGEALIRFVDSEQRDLAL 340
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + F+
Sbjct: 341 QRHKHHMGVRYIEVYKATGEEFV 363
>gi|229368727|gb|ACQ63010.1| RNA binding motif protein 12, isoform 2 (predicted) [Dasypus
novemcinctus]
Length = 900
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 13/184 (7%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ LL D GR++G V+F S D AL+R++ M RY+E+ + + E G
Sbjct: 332 VHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-----SPATERQWVAAG 386
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
G K +G + + + R+K + + +G C+ L+GLP
Sbjct: 387 GHITFKQN---MGPSGQTHPPPQTLPRSKSPSGQKRSRSRSPHEAG-----FCVYLKGLP 438
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL RHK+ +G+R
Sbjct: 439 FEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 212 LVTL 215
+ +
Sbjct: 499 FIQV 502
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMMLNPEGDVNSA--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K+
Sbjct: 543 -KVCAHITNIPFSITKMDVLQFLEGIPVDENSVHVLVDNNGQGLGQALVQFKNEDDARKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 ERLHRKKLNGR 612
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++
Sbjct: 3 VVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMM 58
Query: 203 RHKEKIGHRLVTLVMS 218
R I VTL++S
Sbjct: 59 RTGGTIKGSKVTLLLS 74
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 824 TVIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVI 883
Query: 203 RHKEK-IGHRLVTLVM 217
++ IG R V LV+
Sbjct: 884 DLNDRPIGSRKVKLVL 899
>gi|170587834|ref|XP_001898679.1| fusilli [Brugia malayi]
gi|158593949|gb|EDP32543.1| fusilli, putative [Brugia malayi]
Length = 467
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 44/201 (21%)
Query: 21 SQFF--KPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
+QFF I + L GR +GEA V F + + AL+RH+ + +RYIE+Y
Sbjct: 43 AQFFIGLNIAAGGVALCLSPEGRRNGEALVRFEDSEQRELALKRHRHFLHNRYIEVY--- 99
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
R TG S FL + SE + R +G+
Sbjct: 100 ---------RATG-----------------SDFLQ--VAAGSNSEAVRFVSRGS---TGA 128
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFL----EGLEIVPNGITIPHDYAGRCTGVAYIQFVDK 194
+ +R++GLPY+C + + +F G ++ GI + GR TG A++ F ++
Sbjct: 129 MI----VRMRGLPYDCTEAQILEFFAEGENGCKVTDGGILFVNKSDGRPTGDAFVMFDNE 184
Query: 195 ENAEKALLRHKEKIGHRLVTL 215
E +KAL +HK IG R + L
Sbjct: 185 EAGQKALTKHKRTIGTRYIEL 205
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 33/132 (25%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL + GR +G+A V F + + Q+AL +HK +G RYIEL+ + S +A
Sbjct: 163 ILFVNKSDGRPTGDAFVMFDNEEAGQKALTKHKRTIGTRYIELFRQLNYRSTQAE----- 217
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+ Q + + + +R + + ++ C+RL+GLP
Sbjct: 218 ----------------VQQVVNRNLESDQRMMVHGSSRKD------------CIRLRGLP 249
Query: 152 YECKKEDVEKFL 163
YE E++ +FL
Sbjct: 250 YEAHVENIVEFL 261
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%)
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENA 197
S V + +R +GLP++ D+ +F GL I G+ + GR G A ++F D E
Sbjct: 21 SLVSEVIVRTRGLPWQATDHDIAQFFIGLNIAAGGVALCLSPEGRRNGEALVRFEDSEQR 80
Query: 198 EKALLRHKEKIGHRLVTLVMSGAQWFL 224
E AL RH+ + +R + + + FL
Sbjct: 81 ELALKRHRHFLHNRYIEVYRATGSDFL 107
>gi|426360261|ref|XP_004047366.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 3
[Gorilla gorilla gorilla]
Length = 604
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVY--- 298
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
+A G G S ++QFL+K
Sbjct: 299 -----KATGEDFLKIAGGTSNE-------VAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 28/193 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++ R +
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSS 418
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
TP + + QF+ R C+RL+GLP
Sbjct: 419 APLIPLPTPPIIPVLP-QQFVPPTNVRD------------------------CIRLRGLP 453
Query: 152 YECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YAATIEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM 513
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 514 KDRYVEVFQCSAE 526
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGTRYIEVYKATGEDFL 306
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELYMEEGT 80
+F I + ++ + GR SG+A ++ S D A A Q+ HK NM DRY+E++
Sbjct: 467 EFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQ---C 523
Query: 81 SSKEANGRGTGG 92
S++E N GG
Sbjct: 524 SAEEMNFVLMGG 535
>gi|426360259|ref|XP_004047365.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 2
[Gorilla gorilla gorilla]
Length = 659
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 301
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 302 GEDFLKIAG-GTSN--------------EVAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQV------ 412
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 413 ----------------LNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNVRD--CIRLRGLP 453
Query: 152 YECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YAATIEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM 513
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 514 KDRYVEVFQCSAE 526
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGTRYIEVYKATGEDFL 306
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELYMEEGTSSKEANGRGT 90
+ ++ + GR SG+A ++ S D A A Q+ HK NM DRY+E++ S++E N
Sbjct: 477 VHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQ---CSAEEMNFVLM 533
Query: 91 GG 92
GG
Sbjct: 534 GG 535
>gi|297683325|ref|XP_002819333.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 2
[Pongo abelii]
Length = 604
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVY--- 298
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
+A G G S ++QFL+K
Sbjct: 299 -----KATGEDFLKIAGGTSNE-------VAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 28/193 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++ R +
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSS 418
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
TP + + QF+ R C+RL+GLP
Sbjct: 419 APLIPLPTPPIIPVLP-QQFVPPTNVRD------------------------CIRLRGLP 453
Query: 152 YECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YAATIEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM 513
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 514 KDRYVEVFQCSAE 526
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGTRYIEVYKATGEDFL 306
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELYMEEGT 80
+F I + ++ + GR SG+A ++ S D A A Q+ HK NM DRY+E++
Sbjct: 467 EFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQ---C 523
Query: 81 SSKEANGRGTGG 92
S++E N GG
Sbjct: 524 SAEEMNFVLMGG 535
>gi|417412016|gb|JAA52424.1| Putative rna-binding protein fusilli, partial [Desmodus rotundus]
Length = 627
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 262 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVY--- 318
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
+A G G S ++QFL+K
Sbjct: 319 -----KATGEDFLKIAGGTSNE-------VAQFLSKE----------------------- 343
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 344 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 398
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 399 CEEYAQNALRKHKDLLGKRYIELFRSTA 426
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 106/256 (41%), Gaps = 47/256 (18%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++ R +
Sbjct: 379 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSS 438
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
TP + + QF+ R C+RL+GLP
Sbjct: 439 APLIPLPTPPIIPVL-PQQFVPPTNVRD------------------------CIRLRGLP 473
Query: 152 YECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 474 YAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM 533
Query: 209 GHRLVTLVMSGAQWF-------------LSPP---LTNETPISRLDLTGSPVRSTICVLC 252
R V + A+ LSPP L +P S + V T +
Sbjct: 534 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 593
Query: 253 HP---LTPRSVRPRSV 265
P L PR+++P +
Sbjct: 594 QPSLLLNPRALQPSTA 609
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 243 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 302
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 303 LQRHKHHMGTRYIEVYKATGEDFL 326
>gi|395818385|ref|XP_003782611.1| PREDICTED: epithelial splicing regulatory protein 1 [Otolemur
garnettii]
Length = 665
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 230 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 289
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 290 GEDFLKIAG-GTSN--------------EVAQFLSKE----------------------- 311
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 312 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 366
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 367 CEEYAQNALRKHKDLLGKRYIELFRSTA 394
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 347 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQV------ 400
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 401 ----------------LNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNVRD--CIRLRGLP 441
Query: 152 YECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 442 YAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM 501
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 502 KDRYVEVFQCSAE 514
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 211 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 270
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 271 LQRHKHHMGTRYIEVYKATGEDFL 294
>gi|355686618|gb|AER98119.1| epithelial splicing regulatory protein 2 [Mustela putorius furo]
Length = 650
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 91/208 (43%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYM 76
++FFK I + L + GR +GEA + F VD QR ALQRHK +MG RYIE+Y
Sbjct: 198 ARFFKGLNIARGGVALCLNAQGRRNGEALIRF--VDSEQRDLALQRHKHHMGVRYIEVYK 255
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
G + G GT +++FL++
Sbjct: 256 ATGEEFVKIAG-GTS--------------LEVARFLSRE--------------------- 279
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFV 192
DQ +RL+GLP+ EDV FL G E +G+ GR TG A+ F
Sbjct: 280 ----DQVILRLRGLPFSAGPEDVLGFL-GPECPVTGGADGLLFVRHPDGRPTGDAFALFA 334
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL RHK +G R + L S A
Sbjct: 335 CEELAQAALRRHKGILGKRYIELFRSTA 362
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 84/202 (41%), Gaps = 35/202 (17%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIEL+
Sbjct: 301 FLGPECPVTGGADGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGILGKRYIELFRS 360
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ R + S L A +G
Sbjct: 361 TAAEVQQVLNR-----------------YASSPLLPTLTAPLLPIPFPLA--------AG 395
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ D C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ E
Sbjct: 396 TGRD--CVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAE 453
Query: 196 NAEKALLR-HKEKIGHRLVTLV 216
A A HK+ + R V +V
Sbjct: 454 RALAAAQGCHKKVMKERYVEVV 475
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +DV +F +GL I G+ + + GR G A I+FVD E + AL
Sbjct: 180 ETVVRARGLPWQSSDQDVARFFKGLNIARGGVALCLNAQGRRNGEALIRFVDSEQRDLAL 239
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + F+
Sbjct: 240 QRHKHHMGVRYIEVYKATGEEFV 262
>gi|417412339|gb|JAA52559.1| Putative rna-binding protein fusilli, partial [Desmodus rotundus]
Length = 697
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 262 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVY--- 318
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
+A G G S ++QFL+K
Sbjct: 319 -----KATGEDFLKIAGGTSNE-------VAQFLSKE----------------------- 343
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 344 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 398
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 399 CEEYAQNALRKHKDLLGKRYIELFRSTA 426
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 379 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQV------ 432
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 433 ----------------LNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNVRD--CIRLRGLP 473
Query: 152 YECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 474 YAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM 533
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 534 KDRYVEVFQCSAE 546
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 243 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 302
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 303 LQRHKHHMGTRYIEVYKATGEDFL 326
>gi|170763533|ref|NP_001116299.1| epithelial splicing regulatory protein 1 isoform 5 [Homo sapiens]
gi|114620967|ref|XP_001143905.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 2 [Pan
troglodytes]
Length = 604
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVY--- 298
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
+A G G S ++QFL+K
Sbjct: 299 -----KATGEDFLKIAGGTSNE-------VAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 28/193 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++ R +
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSS 418
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
TP + + QF+ R C+RL+GLP
Sbjct: 419 APLIPLPTPPIIPVLP-QQFVPPTNVRD------------------------CIRLRGLP 453
Query: 152 YECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YAATIEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM 513
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 514 KDRYVEVFQCSAE 526
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGTRYIEVYKATGEDFL 306
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELYMEEGT 80
+F I + ++ + GR SG+A ++ S D A A Q+ HK NM DRY+E++
Sbjct: 467 EFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQ---C 523
Query: 81 SSKEANGRGTGG 92
S++E N GG
Sbjct: 524 SAEEMNFVLMGG 535
>gi|21740240|emb|CAD39131.1| hypothetical protein [Homo sapiens]
Length = 663
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 13/184 (7%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ LL D GR++G V+F S D AL+R++ M RY+E+ + + E G
Sbjct: 63 VHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-----SPATERQWVAAG 117
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
G K +G + + + R+K + + +G C+ L+GLP
Sbjct: 118 GHITFKQN---MGPSGQTHPPPQTLPRSKSPSGQKRSRSRSPHEAG-----FCVYLKGLP 169
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL RHK+ +G+R
Sbjct: 170 FEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNR 229
Query: 212 LVTL 215
+ +
Sbjct: 230 FIQV 233
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 180 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----P 235
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 236 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMILNPEGDVNSA--- 273
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K+
Sbjct: 274 -KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKS 332
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 333 ERLHRKKLNGR 343
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 587 TVIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVI 646
Query: 203 RHKEK-IGHRLVTLVM 217
++ IG R V LV+
Sbjct: 647 DLNDRPIGSRKVKLVL 662
>gi|334311305|ref|XP_001381494.2| PREDICTED: RNA-binding protein 12 [Monodelphis domestica]
Length = 1413
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 89/184 (48%), Gaps = 13/184 (7%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ LL D GR++G V+F S D AL+R++ M RY+E+ + + E G
Sbjct: 332 VHLLKDHVGRNNGNGLVKFFSPQDTFEALKRNRMLMIQRYVEV-----SPATERQWVAAG 386
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
G K + +G + + + R+K + + G C+ L+GLP
Sbjct: 387 GHITFKQS---MGPSGQTHPPPQTLVRSKSPSGQKRSRSRSPHEPG-----FCVYLKGLP 438
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+E + + V F + L+IV + I I + G+ TG +++F + + + AL RHK+ +G+R
Sbjct: 439 FEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRSESDYKAALCRHKQYMGNR 498
Query: 212 LVTL 215
+ +
Sbjct: 499 FIQV 502
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 88/195 (45%), Gaps = 30/195 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF S D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRSESDYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G +
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREIILNTEG-----DSS 540
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K D+ +FLE + + N + I D G+ G A +QF +++A KA
Sbjct: 541 PKLCAHISNIPFNITKMDILQFLEEIPVDENAVHILVDNTGQGLGQALVQFKTEDDAHKA 600
Query: 201 LLRHKEKIGHRLVTL 215
H++K+ R L
Sbjct: 601 ERLHRKKLNGREALL 615
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++
Sbjct: 3 VVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMM 58
Query: 203 RHKEKIGHRLVTLVMS 218
R I VTL++S
Sbjct: 59 RTGGTIKGSKVTLLLS 74
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 803 TVIKVQNMPFTVSVDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEAMAAVV 862
Query: 203 RHKEK-IGHRLVTLV 216
++ IG R V L+
Sbjct: 863 DLNDRPIGSRKVKLM 877
>gi|402878743|ref|XP_003903032.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 3
[Papio anubis]
Length = 604
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVY--- 298
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
+A G G S ++QFL+K
Sbjct: 299 -----KATGEDFLKIAGGTSNE-------VAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 28/193 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++ R +
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSS 418
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
TP + + QF+ R C+RL+GLP
Sbjct: 419 APLIPLPTPPIIPVLP-QQFVPPTNVRD------------------------CIRLRGLP 453
Query: 152 YECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YAATIEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM 513
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 514 KDRYVEVFQCSAE 526
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGTRYIEVYKATGEDFL 306
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELYMEEGT 80
+F I + ++ + GR SG+A ++ S D A A Q+ HK NM DRY+E++
Sbjct: 467 EFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQ---C 523
Query: 81 SSKEANGRGTGG 92
S++E N GG
Sbjct: 524 SAEEMNFVLMGG 535
>gi|40548306|ref|NP_954966.1| epithelial splicing regulatory protein 2 [Danio rerio]
gi|28279592|gb|AAH45439.1| RNA binding motif protein 35B [Danio rerio]
Length = 736
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 90/209 (43%), Gaps = 53/209 (25%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I + L + GR +GEA V F + + AL RHK +MG RYIE+Y
Sbjct: 241 ARFFKGLNIAKGGVALCLNAQGRRNGEALVRFINSEHRDMALDRHKHHMGSRYIEVYKAT 300
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 301 GEEFLKIAG-GTSNE--------------VAQFLSKE----------------------- 322
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFL-------EGLEIVPNGITIPHDYAGRCTGVAYIQF 191
+Q +R++GLP+ +DV FL +G E G+ GR TG A++ F
Sbjct: 323 --NQMIIRMRGLPFTATPQDVLGFLGPECPVTDGTE----GLLFVKYPDGRPTGDAFVLF 376
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 377 ACEEYAQNALKKHKQILGKRYIELFRSTA 405
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 33/202 (16%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A V F+ + AQ AL++HK +G RYIEL+
Sbjct: 344 FLGPECPVTDGTEGLLFVKYPDGRPTGDAFVLFACEEYAQNALKKHKQILGKRYIELFRS 403
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ R STP ++ L + +G
Sbjct: 404 TAAEVQQVLNR-------YMSTP----------LISTLPPPPPPMVSVPVLATPPLITTG 446
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ D C+RL+GLPY ED+ +F+ ++I P+G+ + + GR +G A+IQ +
Sbjct: 447 NTRD--CIRLRGLPYTAAIEDILEFMGEHTIDIKPHGVHMVLNQQGRPSGDAFIQM---K 501
Query: 196 NAEKALLR----HKEKIGHRLV 213
+A++A + HK+ + R V
Sbjct: 502 SADRAFMVAQKCHKKMMKDRYV 523
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 132 GAVLSGSAVD-QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
GA AVD + +R +GLP++ +D+ +F +GL I G+ + + GR G A ++
Sbjct: 212 GACSKTEAVDSETVIRARGLPWQSSDQDIARFFKGLNIAKGGVALCLNAQGRRNGEALVR 271
Query: 191 FVDKENAEKALLRHKEKIGHRLVTLVMSGAQWFL 224
F++ E+ + AL RHK +G R + + + + FL
Sbjct: 272 FINSEHRDMALDRHKHHMGSRYIEVYKATGEEFL 305
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 36/57 (63%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+R+QGLPY +D+ F +G ++ + + + ++++G+ +G A + F ++ A +A+
Sbjct: 661 VRMQGLPYNAGVKDILSFFQGYQLQADSVLVLYNWSGQRSGEALVTFPSEKAARRAV 717
>gi|426360257|ref|XP_004047364.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 1
[Gorilla gorilla gorilla]
Length = 677
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 301
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 302 GEDFLKIAG-GTSN--------------EVAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQV------ 412
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 413 ----------------LNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNVRD--CIRLRGLP 453
Query: 152 YECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YAATIEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM 513
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 514 KDRYVEVFQCSAE 526
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGTRYIEVYKATGEDFL 306
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELYMEEGTSSKEANGRGT 90
+ ++ + GR SG+A ++ S D A A Q+ HK NM DRY+E++ S++E N
Sbjct: 477 VHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQ---CSAEEMNFVLM 533
Query: 91 GG 92
GG
Sbjct: 534 GG 535
>gi|417412369|gb|JAA52574.1| Putative rna-binding protein fusilli, partial [Desmodus rotundus]
Length = 701
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 262 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 321
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 322 GEDFLKIAG-GTSNE--------------VAQFLSKE----------------------- 343
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 344 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 398
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 399 CEEYAQNALRKHKDLLGKRYIELFRSTA 426
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 109/256 (42%), Gaps = 47/256 (18%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 379 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQV------ 432
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 433 ----------------LNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNVRD--CIRLRGLP 473
Query: 152 YECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 474 YAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM 533
Query: 209 GHRLVTLVMSGAQWF-------------LSPP---LTNETPISRLDLTGSPVRSTICVLC 252
R V + A+ LSPP L +P S + V T +
Sbjct: 534 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 593
Query: 253 HP---LTPRSVRPRSV 265
P L PR+++P +
Sbjct: 594 QPSLLLNPRALQPSTA 609
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 243 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 302
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 303 LQRHKHHMGTRYIEVYKATGEDFL 326
>gi|170763529|ref|NP_001116298.1| epithelial splicing regulatory protein 1 isoform 3 [Homo sapiens]
gi|114620965|ref|XP_001143826.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 1 [Pan
troglodytes]
Length = 659
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 301
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 302 GEDFLKIAG-GTSN--------------EVAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQV------ 412
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 413 ----------------LNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNVRD--CIRLRGLP 453
Query: 152 YECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YAATIEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM 513
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 514 KDRYVEVFQCSAE 526
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGTRYIEVYKATGEDFL 306
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELYMEEGTSSKEANGRGT 90
+ ++ + GR SG+A ++ S D A A Q+ HK NM DRY+E++ S++E N
Sbjct: 477 VHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQ---CSAEEMNFVLM 533
Query: 91 GG 92
GG
Sbjct: 534 GG 535
>gi|226500358|ref|NP_001148837.1| LOC100282455 [Zea mays]
gi|195622512|gb|ACG33086.1| RNA binding protein [Zea mays]
gi|238009718|gb|ACR35894.1| unknown [Zea mays]
Length = 303
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY--MEEG 79
+FF + V+ LL+ + GR +GEA V F + A+ AL R + NMG RY+E++ +
Sbjct: 114 KFFVGLDIVDCLLVNKN-GRFTGEAFVVFPTAMQAEFALHRDRQNMGRRYVEVFRCKKHE 172
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA 139
AN GG+ F ++ R + +G++
Sbjct: 173 YYCAIANEVNQGGY-----------------FEPEYRRSPPPPRPRKPSEDKGSMEYTEV 215
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
++L+GLPY ED+ KF E+ + I + G+ TG A+++F E A+
Sbjct: 216 -----LKLRGLPYSATTEDIIKFFLEYELAEENVHIAYRSDGKATGEAFVEFPTAEVAKT 270
Query: 200 ALLRHKEKIGHRLVTLVMS 218
A+ + K IG R V L S
Sbjct: 271 AMCKDKMTIGTRYVELFPS 289
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+RL+GLP++C DV KF GL+IV + + GR TG A++ F AE AL R
Sbjct: 97 CVRLRGLPFDCNDIDVCKFFVGLDIVDCLLV---NKNGRFTGEAFVVFPTAMQAEFALHR 153
Query: 204 HKEKIGHRLVTL 215
++ +G R V +
Sbjct: 154 DRQNMGRRYVEV 165
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 31 NILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRG 89
N+ + G+++GEA VEF + + A+ A+ + K +G RY+EL+ + A RG
Sbjct: 243 NVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKDKMTIGTRYVELFPSTPEEASRAKSRG 301
>gi|197215644|gb|ACH53036.1| RNA binding motif protein 12, isoform 1 (predicted) [Otolemur
garnettii]
Length = 1475
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 13/184 (7%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ LL D GR++G V+F S D AL+R++ M RY+E+ + + E G
Sbjct: 332 VHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-----SPATERQWVAAG 386
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
G K +G + + + R+K + + +G C+ L+GLP
Sbjct: 387 GHITFKQN---MGPSGQTHPPPQTVPRSKSPSGQKRSRSRSPHEAG-----FCVYLKGLP 438
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL RHK+ +G+R
Sbjct: 439 FEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 212 LVTL 215
+ +
Sbjct: 499 FIQV 502
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 91/191 (47%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G SG
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREIILNPEGDGNSG--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D +G+ G A +QF ++++A K+
Sbjct: 543 -KICAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNSGQGLGQALVQFKNEDDARKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 ERLHRKKLNGR 612
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++
Sbjct: 3 VVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMM 58
Query: 203 RHKEKIGHRLVTLVMS 218
R I VTL++S
Sbjct: 59 RTGGTIKGSKVTLLLS 74
>gi|170763527|ref|NP_001116297.1| epithelial splicing regulatory protein 1 isoform 4 [Homo sapiens]
Length = 608
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVY--- 298
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
+A G G S ++QFL+K
Sbjct: 299 -----KATGEDFLKIAGGTSNE-------VAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 106/256 (41%), Gaps = 47/256 (18%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++ R +
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSS 418
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
TP + + QF+ R C+RL+GLP
Sbjct: 419 APLIPLPTPPIIPVL-PQQFVPPTNVRD------------------------CIRLRGLP 453
Query: 152 YECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YAATIEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM 513
Query: 209 GHRLVTLVMSGAQWF-------------LSPP---LTNETPISRLDLTGSPVRSTICVLC 252
R V + A+ LSPP L +P S + V T +
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 573
Query: 253 HP---LTPRSVRPRSV 265
P L PR+++P +
Sbjct: 574 QPSVILNPRALQPSTA 589
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGTRYIEVYKATGEDFL 306
>gi|297683323|ref|XP_002819332.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 1
[Pongo abelii]
Length = 659
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 301
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 302 GEDFLKIAG-GTSN--------------EVAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQV------ 412
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 413 ----------------LNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNVRD--CIRLRGLP 453
Query: 152 YECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YAATIEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM 513
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 514 KDRYVEVFQCSAE 526
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGTRYIEVYKATGEDFL 306
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELYMEEGTSSKEANGRGT 90
+ ++ + GR SG+A ++ S D A A Q+ HK NM DRY+E++ S++E N
Sbjct: 477 VHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQ---CSAEEMNFVLM 533
Query: 91 GG 92
GG
Sbjct: 534 GG 535
>gi|134047877|sp|Q7ZVR8.2|ESRP2_DANRE RecName: Full=Epithelial splicing regulatory protein 2; AltName:
Full=RNA-binding motif protein 35B; AltName:
Full=RNA-binding protein 35B
Length = 736
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 90/209 (43%), Gaps = 53/209 (25%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I + L + GR +GEA V F + + AL RHK +MG RYIE+Y
Sbjct: 241 ARFFKGLNIAKGGVALCLNAQGRRNGEALVRFINSEHRDMALDRHKHHMGSRYIEVYKAT 300
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 301 GEEFLKIAG-GTSNE--------------VAQFLSKE----------------------- 322
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFL-------EGLEIVPNGITIPHDYAGRCTGVAYIQF 191
+Q +R++GLP+ +DV FL +G E G+ GR TG A++ F
Sbjct: 323 --NQMIIRMRGLPFTATPQDVLGFLGPECPVTDGTE----GLLFVKYPDGRPTGDAFVLF 376
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 377 ACEEYAQNALKKHKQILGKRYIELFRSTA 405
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 33/202 (16%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A V F+ + AQ AL++HK +G RYIEL+
Sbjct: 344 FLGPECPVTDGTEGLLFVKYPDGRPTGDAFVLFACEEYAQNALKKHKQILGKRYIELFRS 403
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ R STP ++ L + +G
Sbjct: 404 TAAEVQQVLNR-------YMSTP----------LISTLPPPPPPMVSVPVLATPPFITTG 446
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ D C+RL+GLPY ED+ +F+ ++I P+G+ + + GR +G A+IQ +
Sbjct: 447 NTRD--CIRLRGLPYTAAIEDILEFMGEHTIDIKPHGVHMVLNQQGRPSGDAFIQM---K 501
Query: 196 NAEKALLR----HKEKIGHRLV 213
+A++A + HK+ + R V
Sbjct: 502 SADRAFMVAQKCHKKMMKDRYV 523
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 132 GAVLSGSAVD-QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
GA AVD + +R +GLP++ +D+ +F +GL I G+ + + GR G A ++
Sbjct: 212 GACSKTEAVDSETVIRARGLPWQSSDQDIARFFKGLNIAKGGVALCLNAQGRRNGEALVR 271
Query: 191 FVDKENAEKALLRHKEKIGHRLVTLVMSGAQWFL 224
F++ E+ + AL RHK +G R + + + + FL
Sbjct: 272 FINSEHRDMALDRHKHHMGSRYIEVYKATGEEFL 305
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 36/57 (63%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+R+QGLPY +D+ F +G ++ + + + ++++G+ +G A + F ++ A +A+
Sbjct: 661 VRMQGLPYNAGVKDILSFFQGYQLQADSVLVLYNWSGQRSGEALVTFPSEKAARRAV 717
>gi|296226947|ref|XP_002807679.1| PREDICTED: LOW QUALITY PROTEIN: epithelial splicing regulatory
protein 1 [Callithrix jacchus]
Length = 676
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 301
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 302 GEDFLKIAG-GTSN--------------EVAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQV------ 412
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 413 ----------------LNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNVRD--CIRLRGLP 453
Query: 152 YECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YAATIEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM 513
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 514 KDRYVEVFQCSAE 526
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGTRYIEVYKATGEDFL 306
>gi|127799644|gb|AAH99916.2| Epithelial splicing regulatory protein 1 [Homo sapiens]
Length = 677
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVY--- 298
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
+A G G S ++QFL+K
Sbjct: 299 -----KATGEDFLKIAGGTSNE-------VAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQV------ 412
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 413 ----------------LNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNVRD--CIRLRGLP 453
Query: 152 YECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YAATIEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM 513
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 514 KDRYVEVFQCSAE 526
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGTRYIEVYKATGEDFL 306
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELYMEEGTSSKEANGRGT 90
+ ++ + GR SG+A ++ S D A A Q+ HK NM DRY+E++ S++E N
Sbjct: 477 VHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQ---CSAEEMNFVLM 533
Query: 91 GG 92
GG
Sbjct: 534 GG 535
>gi|403295784|ref|XP_003938806.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 1
[Saimiri boliviensis boliviensis]
Length = 676
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 301
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 302 GEDFLKIAG-GTSN--------------EVAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQV------ 412
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 413 ----------------LNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNVRD--CIRLRGLP 453
Query: 152 YECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YAATIEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM 513
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 514 KDRYVEVFQCSAE 526
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGTRYIEVYKATGEDFL 306
>gi|402878741|ref|XP_003903031.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 2
[Papio anubis]
Length = 659
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 301
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 302 GEDFLKIAG-GTSN--------------EVAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQV------ 412
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 413 ----------------LNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNVRD--CIRLRGLP 453
Query: 152 YECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YAATIEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM 513
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 514 KDRYVEVFQCSAE 526
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGTRYIEVYKATGEDFL 306
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELYMEEGTSSKEANGRGT 90
+ ++ + GR SG+A ++ S D A A Q+ HK NM DRY+E++ S++E N
Sbjct: 477 VHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQ---CSAEEMNFVLM 533
Query: 91 GG 92
GG
Sbjct: 534 GG 535
>gi|395830118|ref|XP_003788182.1| PREDICTED: RNA-binding protein 12 [Otolemur garnettii]
Length = 1478
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 13/184 (7%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ LL D GR++G V+F S D AL+R++ M RY+E+ + + E G
Sbjct: 332 VHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-----SPATERQWVAAG 386
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
G K +G + + + R+K + + +G C+ L+GLP
Sbjct: 387 GHITFKQN---MGPSGQTHPPPQTVPRSKSPSGQKRSRSRSPHEAG-----FCVYLKGLP 438
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL RHK+ +G+R
Sbjct: 439 FEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNR 498
Query: 212 LVTL 215
+ +
Sbjct: 499 FIQV 502
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 91/191 (47%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G SG
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREIILNPEGDGNSG--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D +G+ G A +QF ++++A K+
Sbjct: 543 -KICAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNSGQGLGQALVQFKNEDDARKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 ERLHRKKLNGR 612
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++
Sbjct: 3 VVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMM 58
Query: 203 RHKEKIGHRLVTLVMS 218
R I VTL++S
Sbjct: 59 RTGGTIKGSKVTLLLS 74
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 868 TVIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVI 927
Query: 203 RHKEK-IGHRLVTLV 216
++ IG R V L+
Sbjct: 928 DLNDRPIGSRKVKLM 942
>gi|395739900|ref|XP_003777336.1| PREDICTED: epithelial splicing regulatory protein 1 [Pongo abelii]
Length = 677
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 301
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 302 GEDFLKIAG-GTSN--------------EVAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQV------ 412
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 413 ----------------LNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNVRD--CIRLRGLP 453
Query: 152 YECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YAATIEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM 513
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 514 KDRYVEVFQCSAE 526
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGTRYIEVYKATGEDFL 306
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELYMEEGTSSKEANGRGT 90
+ ++ + GR SG+A ++ S D A A Q+ HK NM DRY+E++ S++E N
Sbjct: 477 VHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQ---CSAEEMNFVLM 533
Query: 91 GG 92
GG
Sbjct: 534 GG 535
>gi|170763525|ref|NP_001030087.2| epithelial splicing regulatory protein 1 isoform 2 [Homo sapiens]
gi|332830836|ref|XP_003311899.1| PREDICTED: epithelial splicing regulatory protein 1 [Pan
troglodytes]
Length = 677
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVY--- 298
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
+A G G S ++QFL+K
Sbjct: 299 -----KATGEDFLKIAGGTSNE-------VAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQV------ 412
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 413 ----------------LNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNVRD--CIRLRGLP 453
Query: 152 YECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YAATIEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM 513
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 514 KDRYVEVFQCSAE 526
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGTRYIEVYKATGEDFL 306
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELYMEEGTSSKEANGRGT 90
+ ++ + GR SG+A ++ S D A A Q+ HK NM DRY+E++ S++E N
Sbjct: 477 VHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQ---CSAEEMNFVLM 533
Query: 91 GG 92
GG
Sbjct: 534 GG 535
>gi|402878739|ref|XP_003903030.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 1
[Papio anubis]
Length = 677
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVY--- 298
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
+A G G S ++QFL+K
Sbjct: 299 -----KATGEDFLKIAGGTSNE-------VAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQV------ 412
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 413 ----------------LNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNVRD--CIRLRGLP 453
Query: 152 YECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YAATIEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM 513
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 514 KDRYVEVFQCSAE 526
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGTRYIEVYKATGEDFL 306
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELYMEEGTSSKEANGRGT 90
+ ++ + GR SG+A ++ S D A A Q+ HK NM DRY+E++ S++E N
Sbjct: 477 VHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQ---CSAEEMNFVLM 533
Query: 91 GG 92
GG
Sbjct: 534 GG 535
>gi|297299790|ref|XP_002808532.1| PREDICTED: LOW QUALITY PROTEIN: epithelial splicing regulatory
protein 1-like [Macaca mulatta]
Length = 677
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 301
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 302 GEDFLKIAG-GTSN--------------EVAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGTRYIEVYKATGEDFL 306
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 28/193 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQV------ 412
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 413 ----------------LNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNVRD--CIRLRGLP 453
Query: 152 YECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + H + +
Sbjct: 454 YAATIEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHXKNM 513
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 514 KDRYVEVFQCSAE 526
>gi|56790297|ref|NP_060167.2| epithelial splicing regulatory protein 1 isoform 1 [Homo sapiens]
gi|124020999|sp|Q6NXG1.2|ESRP1_HUMAN RecName: Full=Epithelial splicing regulatory protein 1; AltName:
Full=RNA-binding motif protein 35A; AltName:
Full=RNA-binding protein 35A
gi|119612127|gb|EAW91721.1| RNA binding motif protein 35A, isoform CRA_b [Homo sapiens]
gi|127799385|gb|AAH67098.2| Epithelial splicing regulatory protein 1 [Homo sapiens]
Length = 681
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 301
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 302 GEDFLKIAG-GTSNE--------------VAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 109/256 (42%), Gaps = 47/256 (18%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQV------ 412
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 413 ----------------LNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNVRD--CIRLRGLP 453
Query: 152 YECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YAATIEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM 513
Query: 209 GHRLVTLVMSGAQWF-------------LSPP---LTNETPISRLDLTGSPVRSTICVLC 252
R V + A+ LSPP L +P S + V T +
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 573
Query: 253 HP---LTPRSVRPRSV 265
P L PR+++P +
Sbjct: 574 QPSVILNPRALQPSTA 589
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGTRYIEVYKATGEDFL 306
>gi|348588462|ref|XP_003479985.1| PREDICTED: epithelial splicing regulatory protein 1-like isoform 1
[Cavia porcellus]
Length = 681
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 301
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 302 GEDFLKIAG-GTSNE--------------VAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQV------ 412
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 413 ----------------LNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNVRD--CIRLRGLP 453
Query: 152 YECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM 513
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 514 KDRYVEVFQCSAE 526
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGTRYIEVYKATGEDFL 306
>gi|444525895|gb|ELV14190.1| Epithelial splicing regulatory protein 1, partial [Tupaia
chinensis]
Length = 689
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 253 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 312
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 313 GEDFLKIAG-GTSNE--------------VAQFLSKE----------------------- 334
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 335 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 389
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 390 CEEYAQNALRKHKDLLGKRYIELFRSTA 417
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 110/256 (42%), Gaps = 42/256 (16%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 370 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQKV------ 423
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
I +++F + + + L +Q V + D C+RL+GLP
Sbjct: 424 -----------FKIQVLNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNVRD--CIRLRGLP 469
Query: 152 YECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 470 YAATIEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM 529
Query: 209 GHRLVTLVMSGAQWF-------------LSPP---LTNETPISRLDLTGSPVRSTICVLC 252
R V + A+ LSPP L +P S + V T +
Sbjct: 530 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 589
Query: 253 HP---LTPRSVRPRSV 265
P L PR+++P +
Sbjct: 590 QPSVLLNPRALQPSTA 605
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 234 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 293
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 294 LQRHKHHMGTRYIEVYKATGEDFL 317
>gi|348588464|ref|XP_003479986.1| PREDICTED: epithelial splicing regulatory protein 1-like isoform 2
[Cavia porcellus]
Length = 659
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 301
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 302 GEDFLKIAG-GTSN--------------EVAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQV------ 412
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 413 ----------------LNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNVRD--CIRLRGLP 453
Query: 152 YECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM 513
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 514 KDRYVEVFQCSAE 526
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGTRYIEVYKATGEDFL 306
>gi|403295786|ref|XP_003938807.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 2
[Saimiri boliviensis boliviensis]
Length = 603
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVY--- 298
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
+A G G S ++QFL+K
Sbjct: 299 -----KATGEDFLKIAGGTSNE-------VAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 28/193 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++ R +
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSS 418
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
TP + + QF+ R C+RL+GLP
Sbjct: 419 APLIPLPTPPIIPVLP-QQFVPPTNVRD------------------------CIRLRGLP 453
Query: 152 YECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YAATIEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM 513
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 514 KDRYVEVFQCSAE 526
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGTRYIEVYKATGEDFL 306
>gi|194387896|dbj|BAG61361.1| unnamed protein product [Homo sapiens]
Length = 731
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 13/184 (7%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ LL D GR++G V+F S D AL+R++ M RY+E+ + + E G
Sbjct: 131 VHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-----SPATERQWVAAG 185
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
G K +G + + + R+K + + +G C+ L+GLP
Sbjct: 186 GHITFKQN---MGPSGQTHPPPQTLPRSKSPSGQKRSRSRSPHEAG-----FCVYLKGLP 237
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL RHK+ +G+R
Sbjct: 238 FEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNR 297
Query: 212 LVTL 215
+ +
Sbjct: 298 FIQV 301
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 248 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----P 303
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 304 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMILNPEGDVNSA--- 341
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K+
Sbjct: 342 -KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKS 400
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 401 ERLHRKKLNGR 411
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 655 TVIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVI 714
Query: 203 RHKEK-IGHRLVTLVM 217
++ IG R V LV+
Sbjct: 715 DLNDRPIGSRKVKLVL 730
>gi|355698103|gb|EHH28651.1| RNA-binding protein 35A [Macaca mulatta]
gi|355779831|gb|EHH64307.1| RNA-binding protein 35A [Macaca fascicularis]
Length = 681
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 301
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 302 GEDFLKIAG-GTSNE--------------VAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 109/256 (42%), Gaps = 47/256 (18%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQV------ 412
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 413 ----------------LNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNVRD--CIRLRGLP 453
Query: 152 YECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YAATIEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM 513
Query: 209 GHRLVTLVMSGAQWF-------------LSPP---LTNETPISRLDLTGSPVRSTICVLC 252
R V + A+ LSPP L +P S + V T +
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 573
Query: 253 HP---LTPRSVRPRSV 265
P L PR+++P +
Sbjct: 574 QPSVILNPRALQPSTA 589
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGTRYIEVYKATGEDFL 306
>gi|211830818|gb|AAH26891.2| Rbm12 protein [Mus musculus]
Length = 887
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 13/184 (7%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ LL D GR++G V+F S D AL+R++ M RY+E+ + + E G
Sbjct: 217 VHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-----SPATERQWVAAG 271
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
G K + +G + + + R+K + + +G C+ L+GLP
Sbjct: 272 GHITFKQS---MGPSGQAHPPPQTLPRSKSPSGQKRSRSRSPHEAG-----FCVYLKGLP 323
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+E + + V F + L+IV + I I + G+ TG +++F + + + AL RHK+ +G+R
Sbjct: 324 FEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNDADYKAALCRHKQYMGNR 383
Query: 212 LVTL 215
+ +
Sbjct: 384 FIQV 387
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 334 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVH----P 389
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 390 ITKK-------------------GMLEKIDMIRKRLQNFSYDQRELVLNPEGEVSSA--- 427
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF +++A K+
Sbjct: 428 -KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKTEDDAHKS 486
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 487 EHLHRKKLNGR 497
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 811 TIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVI 870
Query: 203 RHKEK-IGHRLVTLVM 217
++ IG R V LV+
Sbjct: 871 DLNDRPIGSRKVKLVL 886
>gi|344273261|ref|XP_003408442.1| PREDICTED: epithelial splicing regulatory protein 1 [Loxodonta
africana]
Length = 677
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVY--- 298
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
+A G G S ++QFL+K
Sbjct: 299 -----KATGEDFLKIAGGTSNE-------VAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQV------ 412
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 413 ----------------LNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNVRD--CIRLRGLP 453
Query: 152 YECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM 513
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 514 KDRYVEVFQCSAE 526
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGTRYIEVYKATGEDFL 306
>gi|41351452|gb|AAH65688.1| Rbm35b protein [Danio rerio]
Length = 711
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 90/209 (43%), Gaps = 53/209 (25%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I + L + GR +GEA V F + + AL RHK +MG RYIE+Y
Sbjct: 241 ARFFKGLNIAKGGVALCLNAQGRRNGEALVRFINSEHRDMALDRHKHHMGSRYIEVYKAT 300
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 301 GEEFLKIAG-GTSNE--------------VAQFLSKE----------------------- 322
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFL-------EGLEIVPNGITIPHDYAGRCTGVAYIQF 191
+Q +R++GLP+ +DV FL +G E G+ GR TG A++ F
Sbjct: 323 --NQMIIRMRGLPFTATPQDVLGFLGPECPVTDGTE----GLLFVKYPDGRPTGDAFVLF 376
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 377 ACEEYAQNALKKHKQILGKRYIELFRSTA 405
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 33/202 (16%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A V F+ + AQ AL++HK +G RYIEL+
Sbjct: 344 FLGPECPVTDGTEGLLFVKYPDGRPTGDAFVLFACEEYAQNALKKHKQILGKRYIELFRS 403
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ R STP ++ L + +G
Sbjct: 404 TAAEVQQVLNR-------YMSTP----------LISTLPPPPPPMVSVPVLATPPFITTG 446
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ D C+RL+GLPY ED+ +F+ ++I P+G+ + + GR +G A+IQ +
Sbjct: 447 NTRD--CIRLRGLPYTAAIEDILEFMGEHTIDIKPHGVHMVLNQQGRPSGDAFIQM---K 501
Query: 196 NAEKALLR----HKEKIGHRLV 213
+A++A + HK+ + R V
Sbjct: 502 SADRAFMVAQKCHKKMMKDRYV 523
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 132 GAVLSGSAVD-QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
GA +VD + +R +GLP++ +D+ +F +GL I G+ + + GR G A ++
Sbjct: 212 GACSKTESVDSETVIRARGLPWQSSDQDIARFFKGLNIAKGGVALCLNAQGRRNGEALVR 271
Query: 191 FVDKENAEKALLRHKEKIGHRLVTLVMSGAQWFL 224
F++ E+ + AL RHK +G R + + + + FL
Sbjct: 272 FINSEHRDMALDRHKHHMGSRYIEVYKATGEEFL 305
>gi|26325168|dbj|BAC26338.1| unnamed protein product [Mus musculus]
Length = 841
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 13/184 (7%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ LL D GR++G V+F S D AL+R++ M RY+E+ + + E G
Sbjct: 176 VHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-----SPATERQWVAAG 230
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
G K + +G + + + R+K + + +G C+ L+GLP
Sbjct: 231 GHITFKQS---MGPSGQAHPPPQTLPRSKSPSGQKRSRSRSPHEAG-----FCVYLKGLP 282
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+E + + V F + L+IV + I I + G+ TG +++F + + + AL RHK+ +G+R
Sbjct: 283 FEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNDADYKAALCRHKQYMGNR 342
Query: 212 LVTL 215
+ +
Sbjct: 343 FIQV 346
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 89/191 (46%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 293 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVH----P 348
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 349 ITKK-------------------GMLEKIDMIRKRLQNFSYDQRELVLNPEGEVSSA--- 386
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + + + + D G+ G A +QF +++A K+
Sbjct: 387 -KVCAHITNIPFSITKMDVLQFLEGIPVDESAVHVLVDNNGQGLGQALVQFKTEDDAHKS 445
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 446 EHLHRKKLNGR 456
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 765 TIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVI 824
Query: 203 RHKEK-IGHRLVTLVM 217
++ IG R V LV+
Sbjct: 825 DLNDRPIGSRKVKLVL 840
>gi|395505306|ref|XP_003756983.1| PREDICTED: RNA-binding protein 12 [Sarcophilus harrisii]
Length = 1415
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 89/184 (48%), Gaps = 13/184 (7%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ LL D GR++G V+F S D AL+R++ M RY+E+ + + E G
Sbjct: 332 VHLLKDHVGRNNGNGLVKFFSPQDTFEALKRNRMLMIQRYVEV-----SPATERQWVAAG 386
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
G K + +G + + + R+K + + G C+ L+GLP
Sbjct: 387 GHITFKQS---MGPSGQTHPPPQTLVRSKSPSGQKRSRSRSPHEPG-----FCVYLKGLP 438
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+E + + V F + L+IV + I I + G+ TG +++F + + + AL RHK+ +G+R
Sbjct: 439 FEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRSESDYKAALCRHKQYMGNR 498
Query: 212 LVTL 215
+ +
Sbjct: 499 FIQV 502
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 88/195 (45%), Gaps = 30/195 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF S D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRSESDYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G +
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREIILNTEG-----DSS 540
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K D+ +FLE + + N + I D G+ G A +QF +++A KA
Sbjct: 541 PKLCAHISNIPFNITKMDILQFLEEIPVDENAVHILVDNTGQGLGQALVQFKTEDDAHKA 600
Query: 201 LLRHKEKIGHRLVTL 215
H++K+ R L
Sbjct: 601 ERLHRKKLNGREALL 615
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++
Sbjct: 3 VVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMM 58
Query: 203 RHKEKIGHRLVTLVMS 218
R I VTL++S
Sbjct: 59 RTGGTIKGSKVTLLLS 74
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 803 TVIKVQNMPFTVSVDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEAMAAVV 862
Query: 203 RHKEK-IGHRLVTLV 216
++ IG R V L+
Sbjct: 863 DLNDRPIGSRKVKLM 877
>gi|297612598|ref|NP_001066073.2| Os12g0131000 [Oryza sativa Japonica Group]
gi|255670013|dbj|BAF29092.2| Os12g0131000 [Oryza sativa Japonica Group]
Length = 292
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 25/199 (12%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY--MEEG 79
+FF + V+ LL+ + GR +GEA V F S A+ AL R++ NMG RY+E++ ++
Sbjct: 103 KFFVGLDIVDCLLVHKN-GRFTGEAFVVFPSAMQAEFALHRNRQNMGRRYVEVFRCKKQE 161
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA 139
S A GGF F +++ R + + + +
Sbjct: 162 YYSAIAAEVNQGGF-----------------FDSEY-RHSPPPPRPKKPAEDKSSMEYTE 203
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
V ++L+GLPY ED+ KF E+ + I + G+ TG AY++F E +
Sbjct: 204 V----LKLRGLPYSATTEDIIKFFVEYELTDENVHIVYRPDGKATGEAYVEFPTAEVVKT 259
Query: 200 ALLRHKEKIGHRLVTLVMS 218
A+ + K IG R V L S
Sbjct: 260 AMCKDKMTIGTRYVELFPS 278
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RL+GLP++C D+ KF GL+IV + H GR TG A++ F AE AL R+
Sbjct: 87 VRLRGLPFDCDDLDICKFFVGLDIV--DCLLVHK-NGRFTGEAFVVFPSAMQAEFALHRN 143
Query: 205 KEKIGHRLVTLVMSGAQWFLS 225
++ +G R V + Q + S
Sbjct: 144 RQNMGRRYVEVFRCKKQEYYS 164
>gi|194882767|ref|XP_001975482.1| GG22342 [Drosophila erecta]
gi|190658669|gb|EDV55882.1| GG22342 [Drosophila erecta]
Length = 892
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 76/186 (40%), Gaps = 47/186 (25%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR +GEA + F + AL+RHK ++G RYIE+Y G
Sbjct: 317 GRRNGEALIRFVCQEHRDMALKRHKHHIGTRYIEVYRASG-------------------- 356
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
FLA + ++ A LS A Q +R++GLPY+ + V
Sbjct: 357 ---------EDFLAIAGGASNEAQ---------AFLSKGA--QVIIRMRGLPYDATAKQV 396
Query: 160 EKFLEGLEIVP-------NGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRL 212
F + P G+ GR TG A++ F + +A KAL RH+E IG R
Sbjct: 397 LDFFTAGDTPPCHVLDGNEGVLFVKKPDGRATGDAFVLFAHESDASKALCRHRESIGQRY 456
Query: 213 VTLVMS 218
+ L S
Sbjct: 457 IELFRS 462
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 80/186 (43%), Gaps = 20/186 (10%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+L + GR++G+A V F+ DA +AL RH+ ++G RYIEL+ ++ R
Sbjct: 417 VLFVKKPDGRATGDAFVLFAHESDASKALCRHRESIGQRYIELFRSTTAEVQQVLNRSMD 476
Query: 92 G----FGGVKSTP--------------YGVGIFCISQFLAKWMRRAKRSEMDWALKRQGA 133
GG S P VG +S L AL
Sbjct: 477 PKNYESGGGHSQPPLIAQLPTMQLPLLPQVGAHSLSHSLGASPANLCPPVPPPALPLPTQ 536
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQF 191
L S + C+RL+GLPYE E + FL+ I+ G+ + + G+ +G A+IQ
Sbjct: 537 HLITSGTTKNCIRLRGLPYEAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQM 596
Query: 192 VDKENA 197
+E+A
Sbjct: 597 DLEESA 602
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
C +R +GLP++ +D+ KF GL + G+ + GR G A I+FV +E+ + AL
Sbjct: 278 NCIVRARGLPWQSSDQDIAKFFRGLNVAKGGVALCLSPLGRRNGEALIRFVCQEHRDMAL 337
Query: 202 LRHKEKIGHRLVTLVMSGAQWFLS 225
RHK IG R + + + + FL+
Sbjct: 338 KRHKHHIGTRYIEVYRASGEDFLA 361
>gi|222616578|gb|EEE52710.1| hypothetical protein OsJ_35118 [Oryza sativa Japonica Group]
Length = 291
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 25/199 (12%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY--MEEG 79
+FF + V+ LL+ + GR +GEA V F S A+ AL R++ NMG RY+E++ ++
Sbjct: 102 KFFVGLDIVDCLLVHKN-GRFTGEAFVVFPSAMQAEFALHRNRQNMGRRYVEVFRCKKQE 160
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA 139
S A GGF F +++ R + + + +
Sbjct: 161 YYSAIAAEVNQGGF-----------------FDSEY-RHSPPPPRPKKPAEDKSSMEYTE 202
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
V ++L+GLPY ED+ KF E+ + I + G+ TG AY++F E +
Sbjct: 203 V----LKLRGLPYSATTEDIIKFFVEYELTDENVHIVYRPDGKATGEAYVEFPTAEVVKT 258
Query: 200 ALLRHKEKIGHRLVTLVMS 218
A+ + K IG R V L S
Sbjct: 259 AMCKDKMTIGTRYVELFPS 277
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RL+GLP++C D+ KF GL+IV + H GR TG A++ F AE AL R+
Sbjct: 86 VRLRGLPFDCDDLDICKFFVGLDIV--DCLLVHK-NGRFTGEAFVVFPSAMQAEFALHRN 142
Query: 205 KEKIGHRLVTLVMSGAQWFLS 225
++ +G R V + Q + S
Sbjct: 143 RQNMGRRYVEVFRCKKQEYYS 163
>gi|449494990|ref|XP_002198687.2| PREDICTED: epithelial splicing regulatory protein 1 [Taeniopygia
guttata]
Length = 766
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG+RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGNRYIEVYKAT 301
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 302 GEDFLKIAG-GTSNE--------------VAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F V G +T P R TG A++ F
Sbjct: 324 --NQVIVRMRGLPFNVTTEEVLTFFGQHCPVTGGKEGVLFVTYPDS---RPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALKKHKDLLGKRYIELFRSTA 406
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DNAVIRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G+R + + + + FL
Sbjct: 283 LQRHKHHMGNRYIEVYKATGEDFL 306
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 107/270 (39%), Gaps = 56/270 (20%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF PV +L +T R +G+A V F+ + AQ AL++HK +G RYIEL+
Sbjct: 345 FFGQHCPVTGGKEGVLFVTYPDSRPTGDAFVLFACEEYAQNALKKHKDLLGKRYIELFRS 404
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ R + + Q V
Sbjct: 405 TAAEVQQVLNR-----------------------YSSTPLIPLPRPPILPVLPQQFVPPT 441
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ D C+RL+GLPY ED+ +FL +I +G+ + ++ GR +G A+IQ +
Sbjct: 442 TIRD--CIRLRGLPYAATIEDILEFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQM---K 496
Query: 196 NAEKALLR----HKEKIGHRLVTLVMSGAQWF-------------LSPPLTNETPISRLD 238
+A++A L HK+ + R V + A+ LSPP P
Sbjct: 497 SADRAFLAAQKCHKKTMKDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCISPPAYSFP 556
Query: 239 LTGSPVRSTICVLCHP---LTPRSVRPRSV 265
+ V T L P L PR+++P +
Sbjct: 557 APAA-VVPTEAALYQPSMLLNPRTLQPSTA 585
>gi|440906249|gb|ELR56534.1| Epithelial splicing regulatory protein 1, partial [Bos grunniens
mutus]
Length = 715
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 91/213 (42%), Gaps = 51/213 (23%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 279 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGSRYIEVYKAT 338
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 339 GEDFLKIAG-GTSN--------------EVAQFLSKE----------------------- 360
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ ++V F + G +T P GR TG A++ F
Sbjct: 361 --NQVIVRMRGLPFTATADEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 415
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGAQWFLS 225
+E A+ AL +HK+ +G R + L S A L+
Sbjct: 416 CEEYAQNALRKHKDLLGKRYIELFRSTAAEVLN 448
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 111/256 (43%), Gaps = 50/256 (19%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+
Sbjct: 396 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELF---------------- 439
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+ST V +++F + + + L +Q V + D C+RL+GLP
Sbjct: 440 -----RSTAAEV----LNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNIRD--CIRLRGLP 487
Query: 152 YECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 488 YAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM 547
Query: 209 GHRLVTLVMSGAQWF-------------LSPP---LTNETPISRLDLTGSPVRSTICVLC 252
R V + A+ LSPP L +P S + V T +
Sbjct: 548 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 607
Query: 253 HP---LTPRSVRPRSV 265
P L PR+++P +
Sbjct: 608 QPSVLLNPRALQPSTA 623
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 260 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 319
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 320 LQRHKHHMGSRYIEVYKATGEDFL 343
>gi|426242551|ref|XP_004015136.1| PREDICTED: epithelial splicing regulatory protein 2 [Ovis aries]
Length = 591
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 85/202 (42%), Gaps = 35/202 (17%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIEL+
Sbjct: 241 FLGPECPVTGGADGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRS 300
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ R + S L A +G
Sbjct: 301 TAAEVQQVLNR-----------------YASSPLLPTLTAPLLPIPFPLA--------AG 335
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
S D C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ E
Sbjct: 336 SGRD--CVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAE 393
Query: 196 NAEKALLR-HKEKIGHRLVTLV 216
A A R HK+ + R V +V
Sbjct: 394 RALAAAQRCHKKAMKERYVEVV 415
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 90/208 (43%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYM 76
++FFK I + L + GR +GEA + F VD QR ALQRHK +MG RYIE+Y
Sbjct: 138 ARFFKGLNIARGGVALCLNAQGRRNGEALIRF--VDSEQRDLALQRHKHHMGVRYIEVYK 195
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
G + G GT +++FL++
Sbjct: 196 ATGEEFVKIAG-GTS--------------LEVARFLSRE--------------------- 219
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFV 192
DQ +RL+GLP+ DV FL G E +G+ GR TG A+ F
Sbjct: 220 ----DQVILRLRGLPFSAGPADVLGFL-GPECPVTGGADGLLFVRHPDGRPTGDAFALFA 274
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL RHK +G R + L S A
Sbjct: 275 CEELAQAALRRHKGMLGKRYIELFRSTA 302
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +DV +F +GL I G+ + + GR G A I+FVD E + AL
Sbjct: 120 ETVVRARGLPWQSSDQDVARFFKGLNIARGGVALCLNAQGRRNGEALIRFVDSEQRDLAL 179
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + F+
Sbjct: 180 QRHKHHMGVRYIEVYKATGEEFV 202
>gi|345495521|ref|XP_001604031.2| PREDICTED: RNA-binding protein fusilli-like [Nasonia vitripennis]
Length = 817
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 88/206 (42%), Gaps = 48/206 (23%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FF+ + + L GR +GEA V F S + AL+RHK ++ RYIE+Y
Sbjct: 267 AKFFRGLNVAKGGVALCLSAQGRRNGEALVRFVSKEHRDMALKRHKHHIDQRYIEVYKAL 326
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G G GT G A LS
Sbjct: 327 GEDFVSVAG-GTNG-------------------------------------EAHAFLSRG 348
Query: 139 AVDQCCMRLQGLPYEC-KKEDVEKFLEGLEIV-----PNGITIPHDYAGRCTGVAYIQFV 192
A Q +R++GLPY+C K+ +E FL G + +G+ GR TG A++ F
Sbjct: 349 A--QVIVRMRGLPYDCTAKQVLEFFLTGQKPCQVLDGEDGVLFVKKADGRATGDAFVLFA 406
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMS 218
+E+A KAL +H++ IG R + L S
Sbjct: 407 QEEDAAKALSKHRDCIGSRYIELFRS 432
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
C +R +GLP++ +DV KF GL + G+ + GR G A ++FV KE+ + AL
Sbjct: 250 CVVRARGLPWQSSDQDVAKFFRGLNVAKGGVALCLSAQGRRNGEALVRFVSKEHRDMALK 309
Query: 203 RHKEKIGHRLVTLVMSGAQWFLS 225
RHK I R + + + + F+S
Sbjct: 310 RHKHHIDQRYIEVYKALGEDFVS 332
>gi|443715937|gb|ELU07669.1| hypothetical protein CAPTEDRAFT_49477, partial [Capitella teleta]
Length = 97
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 44/70 (62%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C++L GLPY V+ F EGLEI GI + H+ +CTG+ Y++FV + +KA+ +
Sbjct: 14 CVKLDGLPYLANNVAVKDFFEGLEIAQRGIHLMHNDRHQCTGIGYVEFVTSADCDKAVAK 73
Query: 204 HKEKIGHRLV 213
+KE +G R +
Sbjct: 74 NKEYMGKRFI 83
>gi|327269521|ref|XP_003219542.1| PREDICTED: epithelial splicing regulatory protein 1-like [Anolis
carolinensis]
Length = 648
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG+RYIE+Y
Sbjct: 235 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGNRYIEVY--- 291
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
+A G G S ++QFL+K
Sbjct: 292 -----KATGEDFLKIAGGTSNE-------VAQFLSKE----------------------- 316
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F V G +T P R TG A++ F
Sbjct: 317 --NQVIVRMRGLPFNVTTEEVLTFFGQHCPVTGGKEGILFVTYPDH---RPTGDAFVLFA 371
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 372 CEEYAQNALKKHKDLLGKRYIELFRSTA 399
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +DV +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 216 DNTIIRARGLPWQSSDQDVARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 275
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G+R + + + + FL
Sbjct: 276 LQRHKHHMGNRYIEVYKATGEDFL 299
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 86/207 (41%), Gaps = 33/207 (15%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF PV IL +T R +G+A V F+ + AQ AL++HK +G RYIEL+
Sbjct: 338 FFGQHCPVTGGKEGILFVTYPDHRPTGDAFVLFACEEYAQNALKKHKDLLGKRYIELFRS 397
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ R + + + Q V
Sbjct: 398 TAAEVQQVLNR-----------------------YSSTPLIPLPTPPILPVLPQQFVPPT 434
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ D C+RL+GLPY ED+ FL +I +G+ + ++ GR +G A+IQ E
Sbjct: 435 NVRD--CIRLRGLPYAATIEDILGFLGEFSADIRTHGVHMVLNHQGRPSGDAFIQMKSSE 492
Query: 196 NAEKALLR-HKEKIGHRLVTLVMSGAQ 221
A A + HK+ + R V + A+
Sbjct: 493 RAFMAAQKCHKKTMKDRYVEVFQCSAE 519
>gi|346703709|emb|CBX24377.1| hypothetical_protein [Oryza glaberrima]
Length = 291
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 92/199 (46%), Gaps = 25/199 (12%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY--MEEG 79
+FF + V+ LL+ + GR +GEA V F S A+ AL R++ NMG RY+E++ ++
Sbjct: 102 KFFVGLDIVDCLLVHKN-GRFTGEAFVVFPSAMQAEFALHRNRQNMGRRYVEVFRCKKQE 160
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA 139
S A GGF F +++ R + + + +
Sbjct: 161 YYSAIAAEVNQGGF-----------------FDSEY-RHSPPPPRPKKPAEDKSSMEYTE 202
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
V ++L+GLPY E++ KF E+ + I + G+ TG AY++F E A+
Sbjct: 203 V----LKLRGLPYSATTEEIIKFFVEYELTDENVHIVYRPDGKATGEAYVEFPTAEVAKT 258
Query: 200 ALLRHKEKIGHRLVTLVMS 218
A+ + K IG R V L S
Sbjct: 259 AMCKDKMTIGTRYVELFPS 277
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RL+GLP++C D+ KF GL+IV + H GR TG A++ F AE AL R+
Sbjct: 86 VRLRGLPFDCDDLDICKFFVGLDIV--DCLLVHK-NGRFTGEAFVVFPSAMQAEFALHRN 142
Query: 205 KEKIGHRLVTLVMSGAQWFLS 225
++ +G R V + Q + S
Sbjct: 143 RQNMGRRYVEVFRCKKQEYYS 163
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%)
Query: 31 NILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGR 88
N+ ++ G+++GEA VEF + + A+ A+ + K +G RY+EL+ + A R
Sbjct: 231 NVHIVYRPDGKATGEAYVEFPTAEVAKTAMCKDKMTIGTRYVELFPSTPEEASRAKSR 288
>gi|397500915|ref|XP_003821148.1| PREDICTED: epithelial splicing regulatory protein 1-like [Pan
paniscus]
Length = 422
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 241 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVY--- 297
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
+A G G S ++QFL+K
Sbjct: 298 -----KATGEDFLKIAGGTSNE-------VAQFLSKE----------------------- 322
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 323 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 377
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 378 CEEYAQNALRKHKDLLGKRYIELFRSTA 405
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 222 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 281
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 282 LQRHKHHMGTRYIEVYKATGEDFL 305
>gi|417404143|gb|JAA48844.1| Putative rna-binding protein fusilli [Desmodus rotundus]
Length = 717
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 91/208 (43%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYM 76
++FFK I + L + GR +GEA + F VD QR ALQRHK +MG RYIE+Y
Sbjct: 264 ARFFKGLNIARGGVALCLNAQGRRNGEALIRF--VDSEQRDLALQRHKHHMGVRYIEVYK 321
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
G + G GT +++FL++
Sbjct: 322 ATGEEFVKIAG-GTS--------------LEVARFLSRE--------------------- 345
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFV 192
DQ +RL+GLP+ DV +FL G E +G+ GR TG A+ F
Sbjct: 346 ----DQVILRLRGLPFSAGPADVLEFL-GPECPVTGGADGLLFVRHPDGRPTGDAFALFA 400
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL RHK +G R + L S A
Sbjct: 401 CEELAQAALRRHKGMLGKRYIELFRSTA 428
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 86/203 (42%), Gaps = 35/203 (17%)
Query: 22 QFFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
+F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIEL+
Sbjct: 366 EFLGPECPVTGGADGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFR 425
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
++ R + S L A +
Sbjct: 426 STAAEVQQVLNR-----------------YASSPLLPTLTAPLLPIPFPLA--------A 460
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDK 194
G+ D C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ
Sbjct: 461 GTGRD--CVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSA 518
Query: 195 ENAEKALLR-HKEKIGHRLVTLV 216
E A A R HK+ + R V +V
Sbjct: 519 ERALAAAQRCHKKVMKERYVEVV 541
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +DV +F +GL I G+ + + GR G A I+FVD E + AL
Sbjct: 246 ETVVRARGLPWQSSDQDVARFFKGLNIARGGVALCLNAQGRRNGEALIRFVDSEQRDLAL 305
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + F+
Sbjct: 306 QRHKHHMGVRYIEVYKATGEEFV 328
>gi|332029325|gb|EGI69308.1| RNA-binding protein fusilli [Acromyrmex echinatior]
Length = 677
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 89/206 (43%), Gaps = 48/206 (23%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FF+ + + L GR +GEA V F + + AL+RHK +MG RYIE+Y
Sbjct: 206 AKFFRGLNVAKGGVALCLSPMGRRNGEALVRFINKEHRDMALKRHKHHMGARYIEVYKAS 265
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G F GV G A LS
Sbjct: 266 GED-----------FIGVAGGTSG---------------------------EAHAFLSRG 287
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEG----LEIV--PNGITIPHDYAGRCTGVAYIQFV 192
A Q +R++GLPY+C + V +F + +++ +G+ GR TG A++ F
Sbjct: 288 A--QVIVRMRGLPYDCVAKQVLEFFQSGQKPCQVLDGEDGVLFVKKPDGRATGDAFVLFA 345
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMS 218
+E+A KAL +H++ IG R + L S
Sbjct: 346 KEEDAVKALSKHRDCIGSRYIELFRS 371
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 48/84 (57%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C +R +GLP++ +D+ KF GL + G+ + GR G A ++F++KE+ + A
Sbjct: 187 NDCVVRARGLPWQSSDQDIAKFFRGLNVAKGGVALCLSPMGRRNGEALVRFINKEHRDMA 246
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + F+
Sbjct: 247 LKRHKHHMGARYIEVYKASGEDFI 270
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+L + GR++G+A V F+ +DA +AL +H+ +G RYIEL+ ++ R T
Sbjct: 326 VLFVKKPDGRATGDAFVLFAKEEDAVKALSKHRDCIGSRYIELFRSTTAEVQQVLNRAT- 384
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
P V + L Q + SG+ D C+RL+GLP
Sbjct: 385 -------DPKQV------------ILPPPPIAQLPPLLPQHIITSGTRKD--CVRLRGLP 423
Query: 152 YECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENA 197
YE E + +F+ IV G+ + ++ G+ +G A+IQ + +A
Sbjct: 424 YEALVEHILEFMGEHSKNIVYQGVHMVYNAQGQPSGEAFIQMDSEASA 471
>gi|218185179|gb|EEC67606.1| hypothetical protein OsI_34981 [Oryza sativa Indica Group]
Length = 270
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 84/198 (42%), Gaps = 45/198 (22%)
Query: 24 FKPIVPVNIL--LLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FK V ++I+ LL GR +GEA V F S A+ AL R++ NMG RY+E
Sbjct: 101 FKFFVGLDIVDCLLVHKNGRFTGEAFVVFPSAMQAEFALHRNRQNMGRRYVEG------- 153
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
C R K+ E A+ + S+++
Sbjct: 154 -------------------------C----------RCKKQEYYSAIAAEKPAEDKSSME 178
Query: 142 QC-CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
++L+GLPY ED+ KF E+ + I + G+ TG A+++F E A+ A
Sbjct: 179 YTEVLKLRGLPYSATTEDIIKFFVEYELTEENVHIAYRPDGKATGEAFVEFPTAEVAKTA 238
Query: 201 LLRHKEKIGHRLVTLVMS 218
+ + K IG R V L S
Sbjct: 239 MCKDKMTIGTRYVELFPS 256
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 132 GAVLSGSAVDQCC-----MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGV 186
GA L G+ + +RL+GLP++C D+ KF GL+IV + H GR TG
Sbjct: 68 GANLPGAGANSAIQNFPGVRLRGLPFDCDDLDIFKFFVGLDIV--DCLLVHK-NGRFTGE 124
Query: 187 AYIQFVDKENAEKALLRHKEKIGHRLV 213
A++ F AE AL R+++ +G R V
Sbjct: 125 AFVVFPSAMQAEFALHRNRQNMGRRYV 151
>gi|432909348|ref|XP_004078165.1| PREDICTED: epithelial splicing regulatory protein 1-like [Oryzias
latipes]
Length = 656
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 84/196 (42%), Gaps = 49/196 (25%)
Query: 34 LLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGF 93
L + GR +GEA V F S + ALQRHK +MG+RYIE+Y G + G T
Sbjct: 276 LCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGNRYIEVYKATGEDFLKIAGGTT--- 332
Query: 94 GGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYE 153
+E+ L R+ DQ +R++GLP+
Sbjct: 333 ----------------------------NEVAMFLSRE---------DQIIVRMRGLPFT 355
Query: 154 CKKEDVEKFL---EGL-EIVP-----NGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
E V F +GL E P +GI GR TG A++ F +E+A AL +H
Sbjct: 356 ATYEQVLAFFSPKDGLNETCPVSGGKDGILFVRYPDGRPTGDAFVLFSCEEHALCALRKH 415
Query: 205 KEKIGHRLVTLVMSGA 220
KE +G R + L S A
Sbjct: 416 KEILGKRYIELFKSTA 431
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F GL I G + + GR G A ++FV +E+ + A
Sbjct: 242 DNTVIRARGLPWQSSDQDIARFFRGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 301
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G+R + + + + FL
Sbjct: 302 LQRHKHHMGNRYIEVYKATGEDFL 325
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 62/144 (43%), Gaps = 25/144 (17%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL + GR +G+A V FS + A AL++HK +G RYIEL+ ++ R
Sbjct: 384 ILFVRYPDGRPTGDAFVLFSCEEHALCALRKHKEILGKRYIELFKSTAAEVQQVLNR--- 440
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
STP I A + + L G V + C+RL+GLP
Sbjct: 441 ----YSSTPL------IPVAPAPLLSMLPSVSL---LPPPGCV-------RDCLRLRGLP 480
Query: 152 YECKKEDVEKFLEGL--EIVPNGI 173
Y ED+ FL +I P+G+
Sbjct: 481 YTASIEDILAFLGEFTHDIRPHGV 504
>gi|329664166|ref|NP_001192614.1| epithelial splicing regulatory protein 2 [Bos taurus]
Length = 717
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 86/202 (42%), Gaps = 35/202 (17%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIEL+
Sbjct: 367 FLGPECPVTGGADGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRS 426
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ R + S L A +G
Sbjct: 427 TAAEVQQVLNR-----------------YASSPLLPTLTAPLLPIPFPLA--------AG 461
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ D C+RL+GLPY ED+ FL ++I P+G+ + + GR +G A+IQ E
Sbjct: 462 TGRD--CVRLRGLPYTATIEDILSFLGEAAVDIRPHGVHMVLNQQGRPSGDAFIQMTSAE 519
Query: 196 NAEKALLR-HKEKIGHRLVTLV 216
A A R HK+ + R V +V
Sbjct: 520 RALAAAQRCHKKAMKERYVEVV 541
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 90/208 (43%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYM 76
++FFK I + L + GR +GEA + F VD QR ALQRHK +MG RYIE+Y
Sbjct: 264 ARFFKGLNIARGGVALCLNAQGRRNGEALIRF--VDSEQRDLALQRHKHHMGVRYIEVYK 321
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
G + G GT +++FL++
Sbjct: 322 ATGEEFVKIAG-GTS--------------LEVARFLSRE--------------------- 345
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFV 192
DQ +RL+GLP+ DV FL G E +G+ GR TG A+ F
Sbjct: 346 ----DQVILRLRGLPFSAGPADVLGFL-GPECPVTGGADGLLFVRHPDGRPTGDAFALFA 400
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL RHK +G R + L S A
Sbjct: 401 CEELAQAALRRHKGMLGKRYIELFRSTA 428
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +DV +F +GL I G+ + + GR G A I+FVD E + AL
Sbjct: 246 ETVVRARGLPWQSSDQDVARFFKGLNIARGGVALCLNAQGRRNGEALIRFVDSEQRDLAL 305
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + F+
Sbjct: 306 QRHKHHMGVRYIEVYKATGEEFV 328
>gi|348500206|ref|XP_003437664.1| PREDICTED: epithelial splicing regulatory protein 2-like
[Oreochromis niloticus]
Length = 741
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 91/208 (43%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I + L + GR +GEA V F + + AL+RHK +MG RYIE+Y
Sbjct: 241 ARFFKGLNIAKGGVALCLNAQGRRNGEALVRFINSEHRDLALERHKHHMGSRYIEVYKAT 300
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 301 GEEFLKIAG-GTSNE--------------VAQFLSKE----------------------- 322
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ ++V FL V +G + P GR TG A++ F
Sbjct: 323 --NQVIIRMRGLPFTATPQEVLAFLGPESPVTDGTEGLLFVKYPD---GRPTGDAFVLFS 377
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 378 CEEYAQNALKKHKQILGKRYIELFRSTA 405
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 40/205 (19%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A V FS + AQ AL++HK +G RYIEL+
Sbjct: 344 FLGPESPVTDGTEGLLFVKYPDGRPTGDAFVLFSCEEYAQNALKKHKQILGKRYIELFRS 403
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS- 136
+ Q L ++M S + + VL+
Sbjct: 404 TAAE--------------------------VQQVLNRYMSTPLISTLPPSPIVPVPVLTT 437
Query: 137 -----GSAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYI 189
++ + C+RL+GLPY ED+ +F+ ++I P+G+ + + GR +G A+I
Sbjct: 438 PPFLPAASSTRDCVRLRGLPYTAGIEDILEFMGEHTVDIKPHGVHMVLNQQGRPSGDAFI 497
Query: 190 QFVDKENAEKALLR-HKEKIGHRLV 213
Q + A + HK+ + R V
Sbjct: 498 QMKSPDKAFMVAQKCHKKTMKDRYV 522
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +D+ +F +GL I G+ + + GR G A ++F++ E+ + AL
Sbjct: 223 ETVIRARGLPWQSSDQDIARFFKGLNIAKGGVALCLNAQGRRNGEALVRFINSEHRDLAL 282
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + FL
Sbjct: 283 ERHKHHMGSRYIEVYKATGEEFL 305
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 38/57 (66%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+R+QGLPY +D+ F +G ++ P+ + I ++++G+C+G A I F +E A +A+
Sbjct: 666 VRMQGLPYNTGVKDILSFFQGYQLQPDAVLILYNFSGQCSGEALITFPSEEIARRAV 722
>gi|297699054|ref|XP_002826612.1| PREDICTED: epithelial splicing regulatory protein 2 isoform 1
[Pongo abelii]
Length = 727
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 88/203 (43%), Gaps = 37/203 (18%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIEL+
Sbjct: 377 FLGPECPVTGGAEGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRS 436
Query: 78 EGTSSKEANGR-GTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
++ R +G + P + I LA
Sbjct: 437 TAAEVQQVLNRYASGPVLPTLTAP----LLPIPFPLAP---------------------- 470
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDK 194
G+ D C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ
Sbjct: 471 GTGRD--CVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSA 528
Query: 195 ENAEKALLR-HKEKIGHRLVTLV 216
E A A R HK+ + R V +V
Sbjct: 529 ERALAAAQRCHKKVMKERYVEVV 551
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 83/196 (42%), Gaps = 49/196 (25%)
Query: 31 NILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYMEEGTSSKEANGR 88
+ L + GR +GEA + F VD QR ALQRHK +MG RYIE+Y G + G
Sbjct: 286 GVALCLNAQGRRNGEALIRF--VDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAG- 342
Query: 89 GTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQ 148
GT +++FL++ DQ +RL+
Sbjct: 343 GTS--------------LEVARFLSRE-------------------------DQVILRLR 363
Query: 149 GLPYECKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
GLP+ DV FL G E G+ GR TG A+ F +E A+ AL RH
Sbjct: 364 GLPFSAGPTDVLGFL-GPECPVTGGAEGLLFVRHPDGRPTGDAFALFACEELAQAALRRH 422
Query: 205 KEKIGHRLVTLVMSGA 220
K +G R + L S A
Sbjct: 423 KGMLGKRYIELFRSTA 438
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +DV +F +GL + G+ + + GR G A I+FVD E + AL
Sbjct: 256 ETVVRARGLPWQSSDQDVARFFKGLNVARGGVALCLNAQGRRNGEALIRFVDSEQRDLAL 315
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + F+
Sbjct: 316 QRHKHHMGVRYIEVYKATGEEFV 338
>gi|297699056|ref|XP_002826613.1| PREDICTED: epithelial splicing regulatory protein 2 isoform 2
[Pongo abelii]
Length = 717
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 88/203 (43%), Gaps = 37/203 (18%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIEL+
Sbjct: 367 FLGPECPVTGGAEGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRS 426
Query: 78 EGTSSKEANGR-GTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
++ R +G + P + I LA
Sbjct: 427 TAAEVQQVLNRYASGPVLPTLTAP----LLPIPFPLAP---------------------- 460
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDK 194
G+ D C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ
Sbjct: 461 GTGRD--CVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSA 518
Query: 195 ENAEKALLR-HKEKIGHRLVTLV 216
E A A R HK+ + R V +V
Sbjct: 519 ERALAAAQRCHKKVMKERYVEVV 541
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 83/196 (42%), Gaps = 49/196 (25%)
Query: 31 NILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYMEEGTSSKEANGR 88
+ L + GR +GEA + F VD QR ALQRHK +MG RYIE+Y G + G
Sbjct: 276 GVALCLNAQGRRNGEALIRF--VDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAG- 332
Query: 89 GTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQ 148
GT +++FL++ DQ +RL+
Sbjct: 333 GTS--------------LEVARFLSRE-------------------------DQVILRLR 353
Query: 149 GLPYECKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
GLP+ DV FL G E G+ GR TG A+ F +E A+ AL RH
Sbjct: 354 GLPFSAGPTDVLGFL-GPECPVTGGAEGLLFVRHPDGRPTGDAFALFACEELAQAALRRH 412
Query: 205 KEKIGHRLVTLVMSGA 220
K +G R + L S A
Sbjct: 413 KGMLGKRYIELFRSTA 428
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +DV +F +GL + G+ + + GR G A I+FVD E + AL
Sbjct: 246 ETVVRARGLPWQSSDQDVARFFKGLNVARGGVALCLNAQGRRNGEALIRFVDSEQRDLAL 305
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + F+
Sbjct: 306 QRHKHHMGVRYIEVYKATGEEFV 328
>gi|432852904|ref|XP_004067443.1| PREDICTED: epithelial splicing regulatory protein 2-like [Oryzias
latipes]
Length = 695
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 98/232 (42%), Gaps = 58/232 (25%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I + L + GR +GEA V F + AL+RHK +MG RYIE+Y
Sbjct: 198 ARFFKGLNIAKGGVALCLNAQGRRNGEALVRFIDSEHRDLALERHKHHMGCRYIEVYKAT 257
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 258 GEEFLKIAG-GTSNE--------------VAQFLSKE----------------------- 279
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ ++V FL V +G + P GR TG A++ F
Sbjct: 280 --NQVIIRMRGLPFTATSQEVLSFLGPESPVTDGAEGLLFVKYPD---GRPTGDAFVLFS 334
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA-------QWFLSPPLTNETPISRL 237
+E + AL +HK+ +G R + L S A ++S PL + P S +
Sbjct: 335 CEEYVQNALKKHKQILGKRYIELFRSTAAEVQQVLNRYMSTPLISTLPASPI 386
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 36/202 (17%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A V FS + Q AL++HK +G RYIEL+
Sbjct: 301 FLGPESPVTDGAEGLLFVKYPDGRPTGDAFVLFSCEEYVQNALKKHKQILGKRYIELFRS 360
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ R STP IS A + S+ L
Sbjct: 361 TAAEVQQVLNR-------YMSTPL------ISTLPASPIVPVLASQ---------PFLPA 398
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ + C+RL+GLPY ED+ +F+ ++I P+G+ + + GR +G A+IQ +
Sbjct: 399 ATSTRDCVRLRGLPYTAGIEDILEFMGEHTVDIKPHGVHMVLNQQGRPSGDAFIQM---K 455
Query: 196 NAEKALLR----HKEKIGHRLV 213
+A++A + HK+ + R V
Sbjct: 456 SADRAFMVAQKCHKKTMKDRYV 477
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 132 GAVLSGSAVD-QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
GA VD + +R +GLP++ +D+ +F +GL I G+ + + GR G A ++
Sbjct: 169 GACCKTEPVDSETVIRARGLPWQSSDQDIARFFKGLNIAKGGVALCLNAQGRRNGEALVR 228
Query: 191 FVDKENAEKALLRHKEKIGHRLVTLVMSGAQWFL 224
F+D E+ + AL RHK +G R + + + + FL
Sbjct: 229 FIDSEHRDLALERHKHHMGCRYIEVYKATGEEFL 262
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 38/57 (66%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+R+QGLPY +D+ F +G ++ P+ + I ++++G+C+G A I F ++ A +A+
Sbjct: 620 VRMQGLPYNTGVKDILSFFQGYQLQPDAVVILYNFSGQCSGEALITFPSEDLARRAV 676
>gi|395530818|ref|XP_003767484.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like
[Sarcophilus harrisii]
Length = 344
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 10/88 (11%)
Query: 120 KRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDY 179
R+ D +L G +L C+R GLP+ C KE + F LE+VP+GI +P D+
Sbjct: 6 NRATPDGSLIANGGLL--------CIR--GLPFGCTKETIRHFFSELEMVPSGIILPMDF 55
Query: 180 AGRCTGVAYIQFVDKENAEKALLRHKEK 207
G+ TG A +QF +E AE A+ +HK +
Sbjct: 56 QGKSTGTALVQFASQEAAEIAIRKHKGR 83
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ P+ + + G+++GEADV+F + +DA A+ + K+ M RYIEL++
Sbjct: 207 HFFSPLCPLRVHIEIGQDGKATGEADVDFVTHEDAVAAMAKEKTYMQHRYIELFL 261
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 90/221 (40%), Gaps = 33/221 (14%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKS--------NMGDRYIEL---- 74
+VP I+L D G+S+G A V+F+S + A+ A+++HK N+ I++
Sbjct: 44 MVPSGIILPMDFQGKSTGTALVQFASQEAAEIAIRKHKGRPAPSHLGNLKPVSIQMPTHW 103
Query: 75 --------------YMEEGTSSKEANGRGTGGFGGVK----STPYGVGIFCISQFLAKWM 116
Y +G + RG G++ +G C ++
Sbjct: 104 GPFQAFMVRQRPGPYDTQGLGLRLKTIRGKSSDKGIRPRVCERVHG-NYDCKNRSNNNHN 162
Query: 117 RRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIP 176
S A R G + +A + ++GLPY+ D+ F L + I I
Sbjct: 163 IDVNISTRRIADNRYGEFIFHNATCHHWVHMRGLPYKATVNDIYHFFSPLCPLRVHIEIG 222
Query: 177 HDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVM 217
D G+ TG A + FV E+A A+ + K + HR + L +
Sbjct: 223 QD--GKATGEADVDFVTHEDAVAAMAKEKTYMQHRYIELFL 261
>gi|298710505|emb|CBJ25569.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 670
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 78/180 (43%), Gaps = 54/180 (30%)
Query: 42 SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY------MEEGTSSKEANGRGTGGFGG 95
S GEA V+ + D + AL++ ++ +G RYIE++ +E + G G GG+ G
Sbjct: 82 SRGEAYVKLKNESDLETALKKDRNTIGRRYIEVFRSSIEDVEHALDDVSSKGHGDGGYKG 141
Query: 96 VKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECK 155
V +R++GLP+
Sbjct: 142 V------------------------------------------------VRMRGLPWSAN 153
Query: 156 KEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTL 215
+ D+ F +G+ I +GI + + GR +G AY+ F +E A++AL R K+KIG R + +
Sbjct: 154 EGDIRNFFDGIAIEKDGIHVTLNRDGRPSGEAYVVFETEEAAKEALKRDKDKIGERWIDI 213
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 34/179 (18%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA V F + + A+ AL+R K +G+R+I+++ E T +
Sbjct: 179 GRPSGEAYVVFETEEAAKEALKRDKDKIGERWIDIF--EATKGE---------------- 220
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ ++ K + S + +G +R++GLP+E K +
Sbjct: 221 -----VYSMTGGGGKKGDQGGVS-----FDTTDSAYTG------VVRMRGLPFEATKSQI 264
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
F +G+ + + I I G+ +G A++ F + AEKALL+ KEK+G R + L +
Sbjct: 265 RAFFDGINVKESNIFIVTRPDGKASGEAFVLFSTEAEAEKALLKDKEKLGDRWIDLFAT 323
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 58/220 (26%)
Query: 31 NILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGT 90
NI ++T G++SGEA V FS+ +A++AL + K +GDR+I+L+ ++K
Sbjct: 277 NIFIVTRPDGKASGEAFVLFSTEAEAEKALLKDKEKLGDRWIDLF----ATNK------- 325
Query: 91 GGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGL 150
G GVG+ ++ A++ + +R++GL
Sbjct: 326 ----GALYQRVGVGVKMAAKPDAEF--------------------------RGVLRMRGL 355
Query: 151 PYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKIG 209
P+ E++ F G ++ +G+ + + R TG +Y+ F ++ AE+A K+KIG
Sbjct: 356 PFASGVEEIRTFFRGYKVQEHGVFVVNGGDWRPTGESYVLFDSEDEAERAFKALDKQKIG 415
Query: 210 HRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVRSTIC 249
R + L S ++ DL + VRST+
Sbjct: 416 DRWIELFRS----------------TKGDLYTATVRSTVL 439
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 39/185 (21%)
Query: 41 RSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
R +GE+ V F S D+A+RA + K +GDR+IEL+ A V+ST
Sbjct: 387 RPTGESYVLFDSEDEAERAFKALDKQKIGDRWIELFRSTKGDLYTAT---------VRST 437
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
G ++R GA+ + C++L+GLP+ + ++
Sbjct: 438 VLG-------------------------MERGGAMYGREPM--TCVKLRGLPFNVTENNI 470
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
F EGL ++ G I D R TG +++F ++ + A+ R++E + R V + +
Sbjct: 471 FSFFEGLTVI--GSFICKDVMARPTGEGFVEFATVDDCQLAMSRNRESMMDRYVEVFATS 528
Query: 220 AQWFL 224
+ L
Sbjct: 529 KEDVL 533
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
FF+ + + + D R +GE VEF++VDD Q A+ R++ +M DRY+E++
Sbjct: 473 FFEGLTVIGSFICKDVMARPTGEGFVEFATVDDCQLAMSRNRESMMDRYVEVF 525
>gi|296478109|tpg|DAA20224.1| TPA: fusilli-like [Bos taurus]
Length = 717
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 86/202 (42%), Gaps = 35/202 (17%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIEL+
Sbjct: 367 FLGPECPVTGGADGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRS 426
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ R + S L A +G
Sbjct: 427 TAAEVQQVLNR-----------------YASSPLLPTLTAPLLPIPFPLA--------AG 461
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ D C+RL+GLPY ED+ FL ++I P+G+ + + GR +G A+IQ E
Sbjct: 462 TGRD--CVRLRGLPYTATIEDILSFLGEAAVDIRPHGVHMVLNQQGRPSGDAFIQMTSAE 519
Query: 196 NAEKALLR-HKEKIGHRLVTLV 216
A A R HK+ + R V +V
Sbjct: 520 RALAAAQRCHKKAMKERYVEVV 541
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 90/208 (43%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYM 76
++FFK I + L + GR +GEA + F VD QR ALQRHK +MG RYIE+Y
Sbjct: 264 ARFFKGLNIARGGVALCLNAQGRRNGEALIRF--VDSEQRDLALQRHKHHMGVRYIEVYK 321
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
G + G GT +++FL++
Sbjct: 322 ATGEEFVKIAG-GTS--------------LEVARFLSRE--------------------- 345
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFV 192
DQ +RL+GLP+ DV FL G E +G+ GR TG A+ F
Sbjct: 346 ----DQVILRLRGLPFSAGPADVLGFL-GPECPVTGGADGLLFVRHPDGRPTGDAFALFA 400
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL RHK +G R + L S A
Sbjct: 401 CEELAQAALRRHKGMLGKRYIELFRSTA 428
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%)
Query: 148 QGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEK 207
+GLP++ +DV +F +GL I G+ + + GR G A I+FVD E + AL RHK
Sbjct: 252 RGLPWQSSDQDVARFFKGLNIARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHH 311
Query: 208 IGHRLVTLVMSGAQWFL 224
+G R + + + + F+
Sbjct: 312 MGVRYIEVYKATGEEFV 328
>gi|449499514|ref|XP_002192774.2| PREDICTED: G-rich sequence factor 1 [Taeniopygia guttata]
Length = 402
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 83/188 (44%), Gaps = 49/188 (26%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + GR G+A +E S D QRAL++H MG RY++++ E +
Sbjct: 110 IHFLLNRDGRRRGDALIELESKADVQRALEKHLRYMGPRYVKVF--------EVHDSDVE 161
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
G L + +R ++ D G VL L+GLP
Sbjct: 162 G-------------------LLQSLRDESQAMSD------GVVL-----------LRGLP 185
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAG-RCTGVAYIQFVDKENAEKALLRHKEKIGH 210
+ +ED+ F GL+I I Y G R TG A++QF E A KALLRH+E +G
Sbjct: 186 FTSTEEDIADFFSGLKIT----DIAFIYRGDRRTGEAFVQFATPEMAAKALLRHREYMGS 241
Query: 211 RLVTLVMS 218
R + + +S
Sbjct: 242 RYIEVYVS 249
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ P IL+ + G ++GEADV F S +DA A+ + S M IEL++ E +
Sbjct: 338 NFFAPLRPTRILVEYNSGGDATGEADVHFESHEDAVAAMAKDGSQMECSAIELFLNEHPT 397
Query: 82 SKE 84
+E
Sbjct: 398 GQE 400
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+R QG P+ C +EDV F + I NGI + GR G A I+ K + ++AL
Sbjct: 80 VRAQGFPFSCTEEDVLTFFDSCRIRNGENGIHFLLNRDGRRRGDALIELESKADVQRALE 139
Query: 203 RHKEKIGHRLVTL 215
+H +G R V +
Sbjct: 140 KHLRYMGPRYVKV 152
>gi|47211266|emb|CAF91568.1| unnamed protein product [Tetraodon nigroviridis]
Length = 823
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 104/224 (46%), Gaps = 35/224 (15%)
Query: 9 DILIHI-TYCLLCSQ-----FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQR 62
++ +H+ C++ FF+ + + L D GR +G+A V+F S ++ A++R
Sbjct: 227 ELFVHLQNLPFTCTEMDIRHFFRGLGVDGVRFLKDAQGRHTGKASVKFFSPQESFEAVKR 286
Query: 63 HKSNMGDRYIELY-----------MEEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQF 111
MG R+IE+ + + T+S+ ++ V+S P C +
Sbjct: 287 GGGMMGQRFIEISPGSEQQWASISISDSTASQASHASNKPS---VESQPPQQ--HCRNNA 341
Query: 112 LAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPN 171
A+ + RS + RQ + C+ L+GLPYE K+ +++F L I+ +
Sbjct: 342 GAEGRDQRGRSR---SPHRQ----------EFCVYLKGLPYEADKKQIKEFFSNLAIIED 388
Query: 172 GITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTL 215
I I + GR TG +++F +++ + AL H + +G R + +
Sbjct: 389 SIYIAYGPNGRATGEGFLEFKTEQDHKAALGAHMQYMGSRFIQV 432
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 76/190 (40%), Gaps = 43/190 (22%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEAN 86
I+ +I + GR++GE +EF + D + AL H MG R+I+++
Sbjct: 385 IIEDSIYIAYGPNGRATGEGFLEFKTEQDHKAALGAHMQYMGSRFIQVH----------- 433
Query: 87 GRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQ-----GAVLSGSAVD 141
R+ ++D KR+ G GS
Sbjct: 434 ---------------------------PISRKGMLEKIDAIRKREASHGGGKSQDGSKNP 466
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ C+ + +PY K+DV FLEG+ + + + + D G G A Q +E+A KA
Sbjct: 467 RNCVHITNIPYNISKKDVRAFLEGVGLYEDTLKVLTDSHGNGLGQAIFQLRTEEDARKAE 526
Query: 202 LRHKEKIGHR 211
H++K+ R
Sbjct: 527 RLHRQKLNGR 536
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D+ + LQ LP+ C + D+ F GL + +G+ D GR TG A ++F + + +A
Sbjct: 226 DELFVHLQNLPFTCTEMDIRHFFRGLGV--DGVRFLKDAQGRHTGKASVKFFSPQESFEA 283
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFLSPPLTNET 232
+ R +G R + + Q + S +++ T
Sbjct: 284 VKRGGGMMGQRFIEISPGSEQQWASISISDST 315
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAE 198
A ++LQ +P+ +++ F G ++VP + + G TG A + F + E A
Sbjct: 743 AAGPTVVKLQNMPFTVTVDEIMDFFYGYQVVPGSVCLQFSEKGLPTGEAMVAFQNHEEAT 802
Query: 199 KALLRHKEK-IGHRLVTLVM 217
A+L ++ IG R V + +
Sbjct: 803 AAVLDLNDRPIGARKVKISL 822
>gi|355686615|gb|AER98118.1| epithelial splicing regulatory protein 1 [Mustela putorius furo]
Length = 561
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 150 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 209
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 210 GEDFLKIAG-GTSN--------------EVAQFLSKE----------------------- 231
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ ++V F + G +T P GR TG A++ F
Sbjct: 232 --NQVIVRMRGLPFTATADEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 286
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 287 CEEYAQNALRKHKDLLGKRYIELFRSTA 314
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 28/193 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++ R +
Sbjct: 267 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSS 326
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
TP + + QF+ R C+RL+GLP
Sbjct: 327 APLIPLPTPPMIPVL-PQQFVPPTNVRD------------------------CIRLRGLP 361
Query: 152 YECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 362 YAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM 421
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 422 KDRYVEVFQCSAE 434
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 131 DNTIVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 190
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 191 LQRHKHHMGTRYIEVYKATGEDFL 214
>gi|363741413|ref|XP_003642489.1| PREDICTED: RNA-binding protein 12-like [Gallus gallus]
Length = 880
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 24/209 (11%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I +L D GR++G V+F S D AL+R++ M RY+E+ + + E G
Sbjct: 332 IHMLKDHVGRNNGNGLVKFFSPQDTFEALKRNRMLMIQRYVEV-----SPATERQWVAAG 386
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQC-CMRLQGL 150
G K T + Q + RS+ KR S S +Q C+ L+GL
Sbjct: 387 GHITFKQT-----MGPSGQPHPPPPQPHSRSKSPSGQKRS---RSRSPHEQGFCVYLKGL 438
Query: 151 PYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGH 210
P+E + + V F + L+IV + I I + G+ G +++F ++ + + AL HK+ IG+
Sbjct: 439 PFESENKHVIDFFKKLDIVEDSIYIAYGPNGKAIGEGFVEFRNEADYKAALCHHKQYIGN 498
Query: 211 RLVTLVMSGAQWFLSPPLTNETPISRLDL 239
R + + P+T + + ++DL
Sbjct: 499 RFIQVH----------PITKKAMLEKIDL 517
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 29/195 (14%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G++ GE VEF + D + AL HK +G+R+I+++
Sbjct: 450 FFKKLDIVEDSIYIAYGPNGKAIGEGFVEFRNEADYKAALCHHKQYIGNRFIQVHPITKK 509
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+ E I I + L + + M+ + SGS
Sbjct: 510 AMLEK-------------------IDLIRKRLQNFNYDQREIIMNAEAE------SGSP- 543
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +PY K ++ +FLEGL + N + I D G+ G A +QF +++A KA
Sbjct: 544 -KLCAHISNIPYNITKMEILQFLEGLAVEENSVQILVDNNGQGLGQALVQFKAEDDARKA 602
Query: 201 LLRHKEKIGHRLVTL 215
H++K+ R V L
Sbjct: 603 ERLHRKKLNGRDVVL 617
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++
Sbjct: 3 VVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMM 58
Query: 203 RHKEKIGHRLVTLVMS 218
R I VTL++S
Sbjct: 59 RTGGTIKGSKVTLLLS 74
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 804 TVIKVQNMPFTVSVDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEAMAAVV 863
Query: 203 RHKEK-IGHRLVTLVM 217
++ IG R V LV+
Sbjct: 864 DLNDRPIGSRKVKLVL 879
>gi|340380887|ref|XP_003388953.1| PREDICTED: RNA-binding protein 12B-like [Amphimedon queenslandica]
Length = 746
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 92/223 (41%), Gaps = 29/223 (13%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF+ I +I + +++GR +GEA VE +D RAL RHK +G RYIE++ +
Sbjct: 253 FFQGIAISHITMQLNESGRETGEAFVELFHEEDVDRALDRHKKVLGHRYIEVFRTTRSDI 312
Query: 83 KEANGR----------------GTGGFGGVKSTPYGVGI-FCISQFLAKWMRRAKRSEMD 125
K R G GG S PY G + W E
Sbjct: 313 KPVADRWAKYSRPAPYPGGGGGGGGGGRRYDSDPYHRGAGYKFGGRGGGWSDYGGEREYY 372
Query: 126 WALKRQGA-------VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHD 178
+ GA S C+R++GLPY + ++ F L VP +T+ D
Sbjct: 373 GHSRYSGAGRDMTRPTYSSDPNGGHCVRMRGLPYSASEREIFDFFSPL--VPFRVTLEKD 430
Query: 179 YAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGAQ 221
GR +G ++F E+A A+ K+ GH + V+ AQ
Sbjct: 431 TYGRASGEGEVEFCTHEDAVNAM---KKDRGHIVCDEVLHRAQ 470
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 95/243 (39%), Gaps = 50/243 (20%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKS---------------NM 67
FF P+VP + L D GR+SGE +VEF + +DA A+++ + N+
Sbjct: 416 FFSPLVPFRVTLEKDTYGRASGEGEVEFCTHEDAVNAMKKDRGHIVCDEVLHRAQLEINV 475
Query: 68 GD---------RYIELYMEEGTSSKEANGR----------------GTGGFGGVKSTPYG 102
GD +YIE++ + K R G GG S PY
Sbjct: 476 GDGFLFHHHVCKYIEVFRTTRSDIKPVADRWAKYSRPAPYPGGGGGGGGGGRRYDSDPYH 535
Query: 103 VGI-FCISQFLAKWMRRAKRSEMDWALKRQGA-------VLSGSAVDQCCMRLQGLPYEC 154
G + W E + GA S C+R++GLPY
Sbjct: 536 RGAGYKFGGRGGGWSDYGSEREYYGHSRYSGAGRDMMRPTYSSDPNGGHCVRMRGLPYSA 595
Query: 155 KKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVT 214
+ ++ F L VP +T+ D GR +G ++F E+A A+ + + IG R V
Sbjct: 596 SEREIFDFFSPL--VPFRVTLEKDTYGRASGEGEVEFCTHEDAVNAMKKDRGHIGSRYVE 653
Query: 215 LVM 217
L +
Sbjct: 654 LFL 656
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF P+VP + L D GR+SGE +VEF + +DA A+++ + ++G RY+EL++ S
Sbjct: 603 FFSPLVPFRVTLEKDTYGRASGEGEVEFCTHEDAVNAMKKDRGHIGSRYVELFLHSSPGS 662
Query: 83 KEANGRGTGGF 93
+N G +
Sbjct: 663 NTSNSMGAAQY 673
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKE 206
L+GLPY ++++ F +G+ I + IT+ + +GR TG A+++ +E+ ++AL RHK+
Sbjct: 238 LRGLPYGSTEDNIRDFFQGIAI--SHITMQLNESGRETGEAFVELFHEEDVDRALDRHKK 295
Query: 207 KIGHRLVTL 215
+GHR + +
Sbjct: 296 VLGHRYIEV 304
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENA 197
V+ +RL+GLPY D+ FL+ +++ G+ GR +G AY++ +
Sbjct: 131 VESYFVRLRGLPYSAMASDILDFLKDVQVKDGEKGVHFSFGSDGRVSGEAYVEVCSGGDV 190
Query: 198 EKALLRHKEKIGHRLVTLVMSGAQWF 223
E+AL ++ +G R + + + F
Sbjct: 191 ERALRHDRDHLGGRYIEVFRASQNQF 216
>gi|195334671|ref|XP_002034000.1| GM20128 [Drosophila sechellia]
gi|194125970|gb|EDW48013.1| GM20128 [Drosophila sechellia]
Length = 885
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 77/186 (41%), Gaps = 47/186 (25%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR +GEA + F + AL+RHK ++G RYIE+Y G
Sbjct: 310 GRRNGEALIRFVCQEHRDMALKRHKHHIGTRYIEVYRASG-------------------- 349
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
FLA + ++ A LS A Q +R++GLPY+ + V
Sbjct: 350 ---------EDFLAIAGGASNEAQ---------AFLSKGA--QVIIRMRGLPYDATAKQV 389
Query: 160 EKFLEGLEIVP-------NGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRL 212
F + P G+ GR TG A++ F ++ +A KAL RH+E IG R
Sbjct: 390 LDFFTTGDTPPCHVLDGNEGVLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQRY 449
Query: 213 VTLVMS 218
+ L S
Sbjct: 450 IELFRS 455
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 81/186 (43%), Gaps = 20/186 (10%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+L + GR++G+A V F++ DA +AL RH+ ++G RYIEL+ ++ R
Sbjct: 410 VLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQRYIELFRSTTAEVQQVLNRSMD 469
Query: 92 G----FGGVKSTP--------------YGVGIFCISQFLAKWMRRAKRSEMDWALKRQGA 133
GG S P VG +S L AL
Sbjct: 470 PKNYESGGGHSQPPLIAQLPTMQLPLLPQVGAHSLSHSLGASPANLCPPVPPPALPLPTQ 529
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQF 191
L S + C+RL+GLPYE E + FL+ I+ G+ + + G+ +G A+IQ
Sbjct: 530 HLITSGTTKNCIRLRGLPYEAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQM 589
Query: 192 VDKENA 197
+E+A
Sbjct: 590 DLEESA 595
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
C +R +GLP++ +D+ KF GL + G+ + GR G A I+FV +E+ + AL
Sbjct: 271 NCIVRARGLPWQSSDQDIAKFFRGLNVAKGGVALCLSPLGRRNGEALIRFVCQEHRDMAL 330
Query: 202 LRHKEKIGHRLVTLVMSGAQWFLS 225
RHK IG R + + + + FL+
Sbjct: 331 KRHKHHIGTRYIEVYRASGEDFLA 354
>gi|25153681|ref|NP_741422.1| Protein HRPF-2 [Caenorhabditis elegans]
gi|351059337|emb|CCD74180.1| Protein HRPF-2 [Caenorhabditis elegans]
Length = 610
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 80/184 (43%), Gaps = 53/184 (28%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR +GEA VEF + ++A +A++ + + +RYIE
Sbjct: 99 GRPNGEAYVEFKNTEEAGKAMENDRKEISNRYIE-------------------------- 132
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
+F + A++ R G V +RL+G+P+ CK++DV
Sbjct: 133 -----VFTVEADEAEFEFRPD-------PDSNGEV-------NHVIRLRGVPWSCKEDDV 173
Query: 160 EKFLEGLEIVPNGITI-----PHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVT 214
KF EGLE P I I P R +G A+++F ++ AEKA+ + +G R V
Sbjct: 174 RKFFEGLEPPPAEIVIGGTGGPRS---RPSGEAFVRFTTQDAAEKAMDYNNRHMGSRYVE 230
Query: 215 LVMS 218
+ MS
Sbjct: 231 VFMS 234
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FF P+ ++ + ++ GR SG+A EF + +D Q AL R+ MG RY+EL+ G
Sbjct: 344 FFSPLRCHSVKIGINETGRPSGDAIAEFDNYNDLQVALSRNNQRMGRRYVELFDNRGA 401
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVD 193
+ SG +RL+GLP+ ++D+ +F GL I GR G AY++F +
Sbjct: 55 ISSGEPPRSQYIRLRGLPFNATEKDIHEFFAGLTIERVKFVC---TTGRPNGEAYVEFKN 111
Query: 194 KENAEKALLRHKEKIGHRLVTL 215
E A KA+ +++I +R + +
Sbjct: 112 TEEAGKAMENDRKEISNRYIEV 133
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 22 QFFKPIVPVNILLLTDDAG----RSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+FF+ + P ++ G R SGEA V F++ D A++A+ + +MG RY+E++M
Sbjct: 175 KFFEGLEPPPAEIVIGGTGGPRSRPSGEAFVRFTTQDAAEKAMDYNNRHMGSRYVEVFMS 234
Query: 78 EGTSSKEANGRGTGGF 93
A G G+G +
Sbjct: 235 SMVEFNRAKGGGSGEY 250
>gi|431917858|gb|ELK17089.1| Epithelial splicing regulatory protein 1 [Pteropus alecto]
Length = 680
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 209 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 268
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 269 GEDFLKIAG-GTSN--------------EVAQFLSKE----------------------- 290
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ ++V F + G +T P GR TG A++ F
Sbjct: 291 --NQVIVRMRGLPFTATADEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 345
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 346 CEEYAQNALRKHKDLLGKRYIELFRSTA 373
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 20/207 (9%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEA--NGRG 89
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 326 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAADAESILLVFEH 385
Query: 90 TGGFGGV----KSTPYGVGIFCISQFLAKW----MRRAKRSEMDWALKRQGAVLSGSAVD 141
GGF ++ P F + L K+ R + + VL V
Sbjct: 386 VGGFALFLFISENNP---TFFIVKVKLGKYRHVLNRFSSAPLIPLPTPPIIPVLPQQFVP 442
Query: 142 QC----CMRLQGLPYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
C+RL+GLPY ED+ FL +I +G+ + ++ GR +G A+IQ +
Sbjct: 443 PTNVRDCIRLRGLPYAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSAD 502
Query: 196 NAEKALLR-HKEKIGHRLVTLVMSGAQ 221
A A + HK+ + R V + A+
Sbjct: 503 RAFMAAQKCHKKTMKDRYVEVFQCSAE 529
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 190 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 249
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 250 LQRHKHHMGTRYIEVYKATGEDFL 273
>gi|300795130|ref|NP_001179931.1| epithelial splicing regulatory protein 1 [Bos taurus]
gi|296480439|tpg|DAA22554.1| TPA: epithelial splicing regulatory protein 1 [Bos taurus]
Length = 677
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGSRYIEVY--- 298
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
+A G G S ++QFL+K
Sbjct: 299 -----KATGEDFLKIAGGTSNE-------VAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ ++V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATADEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 28/193 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++ R +
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSS 418
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
TP + + QF+ R C+RL+GLP
Sbjct: 419 APLIPLPTPPIIPVL-PQQFVPPTNIRD------------------------CIRLRGLP 453
Query: 152 YECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM 513
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 514 KDRYVEVFQCSAE 526
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGSRYIEVYKATGEDFL 306
>gi|449491253|ref|XP_004158841.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Cucumis
sativus]
Length = 256
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 33/202 (16%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--- 78
+FF + V++LL+ + GR GEA V F+ + ALQR + NMG RY+E++ +
Sbjct: 69 KFFAGLDIVDVLLVNKN-GRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQD 127
Query: 79 --GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
+ E N G S P + R + + +M++
Sbjct: 128 YYNAVAAEVNYEGIYDNDYHGSPP------------PRQKRFSDKDQMEYTE-------- 167
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
++L+GLP+ K ++ +F ++ + I I G+ TG AY++F E
Sbjct: 168 -------ILKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEE 220
Query: 197 AEKALLRHKEKIGHRLVTLVMS 218
A++A+ + K IG R V L S
Sbjct: 221 AKRAMSKDKMTIGSRYVELFPS 242
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP+ C D+ KF GL+IV + + GR G A++ F E AL R
Sbjct: 52 VVRLRGLPFNCTDIDIFKFFAGLDIVD---VLLVNKNGRFMGEAFVVFAGSVQVEFALQR 108
Query: 204 HKEKIGHRLVTLVMSGAQWFLS--PPLTNETPISRLDLTGSP 243
++ +G R V + Q + + N I D GSP
Sbjct: 109 DRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSP 150
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGR 88
G+++GEA VEF+S ++A+RA+ + K +G RY+EL+ ++ A R
Sbjct: 205 GKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESR 253
>gi|426236209|ref|XP_004012064.1| PREDICTED: epithelial splicing regulatory protein 1 [Ovis aries]
Length = 761
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 326 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGSRYIEVY--- 382
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
+A G G S ++QFL+K
Sbjct: 383 -----KATGEDFLKIAGGTSNE-------VAQFLSKE----------------------- 407
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ ++V F + G +T P GR TG A++ F
Sbjct: 408 --NQVIVRMRGLPFTATADEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 462
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 463 CEEYAQNALRKHKDLLGKRYIELFRSTA 490
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 28/193 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++ R +
Sbjct: 443 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSS 502
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
TP + + QF+ R C+RL+GLP
Sbjct: 503 APLIPLPTPPIIPVL-PQQFVPPTNIRD------------------------CIRLRGLP 537
Query: 152 YECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 538 YAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM 597
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 598 KDRYVEVFQCSAE 610
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 307 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 366
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 367 LQRHKHHMGSRYIEVYKATGEDFL 390
>gi|281363439|ref|NP_001163161.1| fusilli, isoform G [Drosophila melanogaster]
gi|272432494|gb|ACZ94433.1| fusilli, isoform G [Drosophila melanogaster]
Length = 860
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 77/186 (41%), Gaps = 47/186 (25%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR +GEA + F + AL+RHK ++G RYIE+Y G
Sbjct: 317 GRRNGEALIRFVCQEHRDMALKRHKHHIGTRYIEVYRASG-------------------- 356
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
FLA + ++ A LS A Q +R++GLPY+ + V
Sbjct: 357 ---------EDFLAIAGGASNEAQ---------AFLSKGA--QVIIRMRGLPYDATAKQV 396
Query: 160 EKFLEGLEIVP-------NGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRL 212
F + P G+ GR TG A++ F ++ +A KAL RH+E IG R
Sbjct: 397 LDFFTTGDTPPCHVLDGNEGVLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQRY 456
Query: 213 VTLVMS 218
+ L S
Sbjct: 457 IELFRS 462
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 23/172 (13%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+L + GR++G+A V F++ DA +AL RH+ ++G RYIEL+ ++ R
Sbjct: 417 VLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQRYIELFRSTTAEVQQVLNRSMD 476
Query: 92 G----FGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRL 147
GG S P + A+ M L Q + SG+ + C+RL
Sbjct: 477 PKNYESGGGHSQPPLI---------------AQLPTMQLPLLPQHLITSGTT--KNCIRL 519
Query: 148 QGLPYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENA 197
+GLPYE E + FL+ I+ G+ + + G+ +G A+IQ +E+A
Sbjct: 520 RGLPYEAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDLEESA 571
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
C +R +GLP++ +D+ KF GL + G+ + GR G A I+FV +E+ + AL
Sbjct: 278 NCIVRARGLPWQSSDQDIAKFFRGLNVAKGGVALCLSPLGRRNGEALIRFVCQEHRDMAL 337
Query: 202 LRHKEKIGHRLVTLVMSGAQWFLS 225
RHK IG R + + + + FL+
Sbjct: 338 KRHKHHIGTRYIEVYRASGEDFLA 361
>gi|114663265|ref|XP_001167050.1| PREDICTED: epithelial splicing regulatory protein 2 isoform 1 [Pan
troglodytes]
Length = 727
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 87/203 (42%), Gaps = 37/203 (18%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIEL+
Sbjct: 377 FLGPECPVTGGAEGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRS 436
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGI-FCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
++ R G T + I F ++
Sbjct: 437 TAAEVQQVLNRYASGPLLPTLTAPLLPIPFPLA--------------------------P 470
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDK 194
G+ D C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ
Sbjct: 471 GTGRD--CVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSA 528
Query: 195 ENAEKALLR-HKEKIGHRLVTLV 216
E A A R HK+ + R V +V
Sbjct: 529 ERALAAAQRCHKKVMKERYVEVV 551
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYM 76
++FFK + + L + GR +GEA + F VD QR ALQRHK +MG RYIE+Y
Sbjct: 274 ARFFKGLNVARGGVALCLNAQGRRNGEALIRF--VDSEQRDLALQRHKHHMGVRYIEVYK 331
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
G + G GT +++FL++
Sbjct: 332 ATGEEFVKIAG-GTS--------------LEVARFLSRE--------------------- 355
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFV 192
DQ +RL+GLP+ DV FL G E G+ GR TG A+ F
Sbjct: 356 ----DQVILRLRGLPFSAGPTDVLGFL-GPECPVTGGAEGLLFVRHPDGRPTGDAFALFA 410
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL RHK +G R + L S A
Sbjct: 411 CEELAQAALRRHKGMLGKRYIELFRSTA 438
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +DV +F +GL + G+ + + GR G A I+FVD E + AL
Sbjct: 256 ETVVRARGLPWQSSDQDVARFFKGLNVARGGVALCLNAQGRRNGEALIRFVDSEQRDLAL 315
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + F+
Sbjct: 316 QRHKHHMGVRYIEVYKATGEEFV 338
>gi|24653901|ref|NP_725479.1| fusilli, isoform C [Drosophila melanogaster]
gi|21645394|gb|AAM70980.1| fusilli, isoform C [Drosophila melanogaster]
Length = 891
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 77/186 (41%), Gaps = 47/186 (25%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR +GEA + F + AL+RHK ++G RYIE+Y G
Sbjct: 317 GRRNGEALIRFVCQEHRDMALKRHKHHIGTRYIEVYRASG-------------------- 356
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
FLA + ++ A LS A Q +R++GLPY+ + V
Sbjct: 357 ---------EDFLAIAGGASNEAQ---------AFLSKGA--QVIIRMRGLPYDATAKQV 396
Query: 160 EKFLEGLEIVP-------NGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRL 212
F + P G+ GR TG A++ F ++ +A KAL RH+E IG R
Sbjct: 397 LDFFTTGDTPPCHVLDGNEGVLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQRY 456
Query: 213 VTLVMS 218
+ L S
Sbjct: 457 IELFRS 462
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 81/186 (43%), Gaps = 20/186 (10%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+L + GR++G+A V F++ DA +AL RH+ ++G RYIEL+ ++ R
Sbjct: 417 VLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQRYIELFRSTTAEVQQVLNRSMD 476
Query: 92 G----FGGVKSTP--------------YGVGIFCISQFLAKWMRRAKRSEMDWALKRQGA 133
GG S P VG +S L AL
Sbjct: 477 PKNYESGGGHSQPPLIAQLPTMQLPLLPQVGAHSLSHSLGASPANLCPPVPPPALPLPTQ 536
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQF 191
L S + C+RL+GLPYE E + FL+ I+ G+ + + G+ +G A+IQ
Sbjct: 537 HLITSGTTKNCIRLRGLPYEAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQM 596
Query: 192 VDKENA 197
+E+A
Sbjct: 597 DLEESA 602
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
C +R +GLP++ +D+ KF GL + G+ + GR G A I+FV +E+ + AL
Sbjct: 278 NCIVRARGLPWQSSDQDIAKFFRGLNVAKGGVALCLSPLGRRNGEALIRFVCQEHRDMAL 337
Query: 202 LRHKEKIGHRLVTLVMSGAQWFLS 225
RHK IG R + + + + FL+
Sbjct: 338 KRHKHHIGTRYIEVYRASGEDFLA 361
>gi|114663263|ref|XP_511052.2| PREDICTED: epithelial splicing regulatory protein 2 isoform 2 [Pan
troglodytes]
Length = 717
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 87/203 (42%), Gaps = 37/203 (18%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIEL+
Sbjct: 367 FLGPECPVTGGAEGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRS 426
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGI-FCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
++ R G T + I F ++
Sbjct: 427 TAAEVQQVLNRYASGPLLPTLTAPLLPIPFPLA--------------------------P 460
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDK 194
G+ D C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ
Sbjct: 461 GTGRD--CVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSA 518
Query: 195 ENAEKALLR-HKEKIGHRLVTLV 216
E A A R HK+ + R V +V
Sbjct: 519 ERALAAAQRCHKKVMKERYVEVV 541
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYM 76
++FFK + + L + GR +GEA + F VD QR ALQRHK +MG RYIE+Y
Sbjct: 264 ARFFKGLNVARGGVALCLNAQGRRNGEALIRF--VDSEQRDLALQRHKHHMGVRYIEVYK 321
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
G + G GT +++FL++
Sbjct: 322 ATGEEFVKIAG-GTS--------------LEVARFLSRE--------------------- 345
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFV 192
DQ +RL+GLP+ DV FL G E G+ GR TG A+ F
Sbjct: 346 ----DQVILRLRGLPFSAGPTDVLGFL-GPECPVTGGAEGLLFVRHPDGRPTGDAFALFA 400
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL RHK +G R + L S A
Sbjct: 401 CEELAQAALRRHKGMLGKRYIELFRSTA 428
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +DV +F +GL + G+ + + GR G A I+FVD E + AL
Sbjct: 246 ETVVRARGLPWQSSDQDVARFFKGLNVARGGVALCLNAQGRRNGEALIRFVDSEQRDLAL 305
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + F+
Sbjct: 306 QRHKHHMGVRYIEVYKATGEEFV 328
>gi|449434084|ref|XP_004134826.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Cucumis
sativus]
Length = 263
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 33/202 (16%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--- 78
+FF + V++LL+ + GR GEA V F+ + ALQR + NMG RY+E++ +
Sbjct: 76 KFFAGLDIVDVLLVNKN-GRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQD 134
Query: 79 --GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
+ E N G S P + R + + +M++
Sbjct: 135 YYNAVAAEVNYEGIYDNDYHGSPP------------PRQKRFSDKDQMEYTE-------- 174
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
++L+GLP+ K ++ +F ++ + I I G+ TG AY++F E
Sbjct: 175 -------ILKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEE 227
Query: 197 AEKALLRHKEKIGHRLVTLVMS 218
A++A+ + K IG R V L S
Sbjct: 228 AKRAMSKDKMTIGSRYVELFPS 249
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP+ C D+ KF GL+IV + + GR G A++ F E AL R
Sbjct: 59 VVRLRGLPFNCTDIDIFKFFAGLDIVD---VLLVNKNGRFMGEAFVVFAGSVQVEFALQR 115
Query: 204 HKEKIGHRLVTLVMSGAQWFLS--PPLTNETPISRLDLTGSP 243
++ +G R V + Q + + N I D GSP
Sbjct: 116 DRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSP 157
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGR 88
G+++GEA VEF+S ++A+RA+ + K +G RY+EL+ ++ A R
Sbjct: 212 GKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESR 260
>gi|345793292|ref|XP_544182.3| PREDICTED: epithelial splicing regulatory protein 1 [Canis lupus
familiaris]
Length = 764
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 325 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 384
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 385 GEDFLKIAG-GTSNE--------------VAQFLSK------------------------ 405
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ ++V F + G +T P GR TG A++ F
Sbjct: 406 -ENQVIVRMRGLPFTATADEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 461
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 462 CEEYAQNALRKHKDLLGKRYIELFRSTA 489
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 109/256 (42%), Gaps = 47/256 (18%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 442 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQV------ 495
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 496 ----------------LNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNVRD--CIRLRGLP 536
Query: 152 YECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 537 YAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM 596
Query: 209 GHRLVTLVMSGAQWF-------------LSPP---LTNETPISRLDLTGSPVRSTICVLC 252
R V + A+ LSPP L +P S + V T +
Sbjct: 597 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 656
Query: 253 HP---LTPRSVRPRSV 265
P L PR+++P +
Sbjct: 657 QPSVLLNPRALQPSTA 672
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 306 DNTIVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 365
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 366 LQRHKHHMGTRYIEVYKATGEDFL 389
>gi|397487054|ref|XP_003814628.1| PREDICTED: epithelial splicing regulatory protein 2, partial [Pan
paniscus]
Length = 713
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 87/203 (42%), Gaps = 37/203 (18%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIEL+
Sbjct: 363 FLGPECPVTGGAEGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRS 422
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGI-FCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
++ R G T + I F ++
Sbjct: 423 TAAEVQQVLNRYASGPLLPTLTAPLLPIPFPLA--------------------------P 456
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDK 194
G+ D C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ
Sbjct: 457 GTGRD--CVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSA 514
Query: 195 ENAEKALLR-HKEKIGHRLVTLV 216
E A A R HK+ + R V +V
Sbjct: 515 ERALAAAQRCHKKVMKERYVEVV 537
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYM 76
++FFK + + L + GR +GEA + F VD QR ALQRHK +MG RYIE+Y
Sbjct: 260 ARFFKGLNVARGGVALCLNAQGRRNGEALIRF--VDSEQRDLALQRHKHHMGVRYIEVYK 317
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
G + G GT +++FL++
Sbjct: 318 ATGEEFVKIAG-GTS--------------LEVARFLSRE--------------------- 341
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFV 192
DQ +RL+GLP+ DV FL G E G+ GR TG A+ F
Sbjct: 342 ----DQVILRLRGLPFSAGPTDVLGFL-GPECPVTGGAEGLLFVRHPDGRPTGDAFALFA 396
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL RHK +G R + L S A
Sbjct: 397 CEELAQAALRRHKGMLGKRYIELFRSTA 424
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +DV +F +GL + G+ + + GR G A I+FVD E + AL
Sbjct: 242 ETVVRARGLPWQSSDQDVARFFKGLNVARGGVALCLNAQGRRNGEALIRFVDSEQRDLAL 301
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + F+
Sbjct: 302 QRHKHHMGVRYIEVYKATGEEFV 324
>gi|338728568|ref|XP_003365698.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 3
[Equus caballus]
Length = 604
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVY--- 298
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
+A G G S ++QFL+K
Sbjct: 299 -----KATGEDFLKIAGGTSNE-------VAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ ++V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATADEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 28/193 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++ R +
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSS 418
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
TP + + QF+ R C+RL+GLP
Sbjct: 419 APLIPLPTPPIIPVLP-QQFVPPTNVRD------------------------CIRLRGLP 453
Query: 152 YECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM 513
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 514 KDRYVEVFQCSAE 526
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGTRYIEVYKATGEDFL 306
>gi|291390369|ref|XP_002711679.1| PREDICTED: epithelial splicing regulatory protein 2-like
[Oryctolagus cuniculus]
Length = 719
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 90/208 (43%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYM 76
++FFK I + L + GR +GEA + F VD QR ALQRHK +MG RYIE+Y
Sbjct: 266 ARFFKGLNIARGGVALCLNAQGRRNGEALIRF--VDSEQRDLALQRHKHHMGVRYIEVYK 323
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
G + G GT +++FL++
Sbjct: 324 ATGEEFVKIAG-GTS--------------LEVARFLSRE--------------------- 347
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFV 192
DQ +RL+GLP+ DV FL G E +G+ GR TG A+ F
Sbjct: 348 ----DQVILRLRGLPFSAGPTDVLSFL-GPECPVTGGADGLLFVRHPDGRPTGDAFALFA 402
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL RHK +G R + L S A
Sbjct: 403 CEELAQAALRRHKGMLGKRYIELFRSTA 430
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 87/203 (42%), Gaps = 37/203 (18%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIEL+
Sbjct: 369 FLGPECPVTGGADGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRS 428
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS- 136
+ Q L ++ + + L L+
Sbjct: 429 TAAE--------------------------VQQVLNRYASSSLLPTLTAPLLPLPFPLAP 462
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDK 194
G+ D C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ
Sbjct: 463 GTGRD--CVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSA 520
Query: 195 ENAEKALLR-HKEKIGHRLVTLV 216
E A A R HK+ + R V +V
Sbjct: 521 ERALAAAQRSHKKVMKERYVEVV 543
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +DV +F +GL I G+ + + GR G A I+FVD E + AL
Sbjct: 248 ETVVRARGLPWQSSDQDVARFFKGLNIARGGVALCLNAQGRRNGEALIRFVDSEQRDLAL 307
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + F+
Sbjct: 308 QRHKHHMGVRYIEVYKATGEEFV 330
>gi|268536900|ref|XP_002633585.1| Hypothetical protein CBG05462 [Caenorhabditis briggsae]
Length = 588
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 49/199 (24%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF ++ V + GR +GEA VEF+S DDA R ++ + M +RYIE++
Sbjct: 81 EFFTGLI-VKRVKFVCTTGRPNGEAYVEFASTDDAGRGMECDRKEMSNRYIEIF------ 133
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
S P G ++F R + D G+ +
Sbjct: 134 ----------------SVPISEGE---NEF---------RPDAD-----------GNGEE 154
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYA--GRCTGVAYIQFVDKENAEK 199
+RL+G+P+ CK+EDV++F +GLE P I I R +G A+++F + A K
Sbjct: 155 NHVVRLRGVPWSCKEEDVKQFFQGLEPPPAEIVIGGTSGPRPRPSGEAFVRFT-SQAAAK 213
Query: 200 ALLRHKEKIGHRLVTLVMS 218
A+ + +G R V + MS
Sbjct: 214 AMEYNNMHMGTRYVEVFMS 232
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FF P+ +I L ++AGRSSG+A EF S D Q L R+ MG RY+EL+ G
Sbjct: 346 FFSPLRVHSIKLGINEAGRSSGDAIAEFDSYQDLQSGLARNNQRMGRRYVELFDTRGA 403
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKE 206
++GLPY+ +E F L + + I + + AGR +G A +F ++ + L R+ +
Sbjct: 331 MRGLPYDADHHAIEAFFSPLRV--HSIKLGINEAGRSSGDAIAEFDSYQDLQSGLARNNQ 388
Query: 207 KIGHRLVTL 215
++G R V L
Sbjct: 389 RMGRRYVEL 397
Score = 40.4 bits (93), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 135 LSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDK 194
+SG+++ +RL+GLP+ ++D+ +F GL + GR G AY++F
Sbjct: 55 ISGASLKSQFVRLRGLPFNATEKDIHEFFTGLIVKRVKFVC---TTGRPNGEAYVEFAST 111
Query: 195 ENAEKALLRHKEKIGHRLVTL 215
++A + + ++++ +R + +
Sbjct: 112 DDAGRGMECDRKEMSNRYIEI 132
>gi|335286314|ref|XP_003355068.1| PREDICTED: epithelial splicing regulatory protein 1-like isoform 2
[Sus scrofa]
Length = 608
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVY--- 298
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
+A G G S ++QFL+K
Sbjct: 299 -----KATGEDFLKIAGGTSNE-------VAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ ++V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATADEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 109/256 (42%), Gaps = 47/256 (18%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQV------ 412
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 413 ----------------LNRFSSAPLIPLPTPPIIPVLPQQ-FVTPTNVRD--CIRLRGLP 453
Query: 152 YECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM 513
Query: 209 GHRLVTLVMSGAQWF-------------LSPP---LTNETPISRLDLTGSPVRSTICVLC 252
R V + A+ LSPP L +P S + V T +
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 573
Query: 253 HP---LTPRSVRPRSV 265
P L PR+++P +
Sbjct: 574 QPSVLLNPRALQPSTA 589
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGTRYIEVYKATGEDFL 306
>gi|281352677|gb|EFB28261.1| hypothetical protein PANDA_016305 [Ailuropoda melanoleuca]
Length = 656
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 301
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 302 GEDFLKIAG-GTSN--------------EVAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ ++V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATADEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQV------ 412
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 413 ----------------LNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNVRD--CIRLRGLP 453
Query: 152 YECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM 513
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 514 KDRYVEVFQCSAE 526
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DNTIVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGTRYIEVYKATGEDFL 306
>gi|363730887|ref|XP_418338.3| PREDICTED: epithelial splicing regulatory protein 1 [Gallus gallus]
Length = 636
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F + + ALQRHK +MG+RYIE+Y
Sbjct: 242 AKFFKGLNIAKGGAALCLNAQGRRNGEALVRFVNEEHRDLALQRHKHHMGNRYIEVYKAT 301
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 302 GEDFLKIAG-GTSNE--------------VAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F V G +T P R TG A++ F
Sbjct: 324 --NQVIVRMRGLPFNVTTEEVLAFFGQHCPVTGGKEGVLFVTYPD---SRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALKKHKDLLGKRYIELFRSTA 406
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ KF +GL I G + + GR G A ++FV++E+ + A
Sbjct: 223 DNAVIRARGLPWQSSDQDIAKFFKGLNIAKGGAALCLNAQGRRNGEALVRFVNEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G+R + + + + FL
Sbjct: 283 LQRHKHHMGNRYIEVYKATGEDFL 306
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 108/270 (40%), Gaps = 52/270 (19%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF PV +L +T R +G+A V F+ + AQ AL++HK +G RYIEL+
Sbjct: 345 FFGQHCPVTGGKEGVLFVTYPDSRPTGDAFVLFACEEYAQNALKKHKDLLGKRYIELFRS 404
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ R + + + Q V
Sbjct: 405 TAAEVQQVLNR-----------------------YSSTPLIPLPTPPILPVLPQQFVPPT 441
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ D C+RL+GLPY ED+ +FL +I +G+ + ++ GR +G A+IQ +
Sbjct: 442 NVRD--CIRLRGLPYAATIEDILEFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSAD 499
Query: 196 NAEKALLR-HKEKIGHRLVTLVMSGAQWF-------------LSPP---LTNETPISRLD 238
A A R HK+ + R V + A+ LSPP L +P S
Sbjct: 500 RAFLAAQRCHKKTMKDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYSF 559
Query: 239 LTGSPVRSTICVLCHP---LTPRSVRPRSV 265
S V T L P L PR+++P +
Sbjct: 560 PAPSAVVPTEAALYQPSVLLNPRTLQPSTA 589
>gi|327271497|ref|XP_003220524.1| PREDICTED: RNA-binding protein 12-like [Anolis carolinensis]
Length = 1418
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 27/191 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ +L D GR++G V+F S D AL+R++ M RY+E+ + + E G
Sbjct: 329 VHILKDHVGRNNGNGFVKFCSPPDTFEALKRNRMLMIQRYVEV-----SPATERQWVTAG 383
Query: 92 GFGGVKST--PYGVG-----IFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCC 144
G K T P G +S+ R RS D C
Sbjct: 384 GHITFKQTMGPSGQNHPSPQTLSMSKSPNGQKRSRSRSPHDQGF---------------C 428
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+ L+GLP+E + + V F + L+IV + I I + G+ G +++F ++ + + AL H
Sbjct: 429 VYLKGLPFESENKHVIDFFKKLDIVEDSIYIAYGPNGKALGEGFVEFRNEADYKAALCHH 488
Query: 205 KEKIGHRLVTL 215
K+ IG+R + +
Sbjct: 489 KQYIGNRFIQV 499
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 29/195 (14%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G++ GE VEF + D + AL HK +G+R+I+++
Sbjct: 446 FFKKLDIVEDSIYIAYGPNGKALGEGFVEFRNEADYKAALCHHKQYIGNRFIQVH----P 501
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+A + + + K ++ + + + +G +
Sbjct: 502 ITKKA-------------------MLEKIEMIRKRLQSFNYDQREIMINTEGEM----GP 538
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C R+ +PY K ++ +FLEGL + N I I D G+ G A +Q +E+A K+
Sbjct: 539 PKLCARISNIPYNITKMEIIQFLEGLAVDENSIQILVDTNGQGLGQALVQLKTEEDARKS 598
Query: 201 LLRHKEKIGHRLVTL 215
H++K+ R V L
Sbjct: 599 ERLHRKKLNGRDVVL 613
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++
Sbjct: 3 VVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMM 58
Query: 203 RHKEKIGHRLVTLVMS 218
R I VTL++S
Sbjct: 59 RTGGAIKGSKVTLLLS 74
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 811 TVIKVQNMPFTVSVDEILDFFYGYQVIPGSVCLKYNEKGMTTGEAMVAFESRDEAMAAVV 870
Query: 203 RHKEK-IGHRLVTLV 216
++ IG R V L+
Sbjct: 871 DLNDRPIGSRKVKLM 885
>gi|240849679|gb|ACS54296.1| RE48185p [Drosophila melanogaster]
Length = 860
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 77/186 (41%), Gaps = 47/186 (25%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR +GEA + F + AL+RHK ++G RYIE+Y G
Sbjct: 317 GRRNGEALIRFVCQEHRDMALKRHKHHIGTRYIEVYRASG-------------------- 356
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
FLA + ++ A LS A Q +R++GLPY+ + V
Sbjct: 357 ---------EDFLAIAGGASNEAQ---------AFLSKGA--QVIIRMRGLPYDATAKQV 396
Query: 160 EKFLEGLEIVP-------NGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRL 212
F + P G+ GR TG A++ F ++ +A KAL RH+E IG R
Sbjct: 397 LDFFTTGDAPPCHVLDGNEGVLFVEKPDGRATGDAFVLFANETDAPKALGRHRESIGQRY 456
Query: 213 VTLVMS 218
+ L S
Sbjct: 457 IELFRS 462
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 23/172 (13%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+L + GR++G+A V F++ DA +AL RH+ ++G RYIEL+ ++ R
Sbjct: 417 VLFVEKPDGRATGDAFVLFANETDAPKALGRHRESIGQRYIELFRSTTAEVQQVLNRSMD 476
Query: 92 G----FGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRL 147
GG S P + A+ M L Q + SG+ + C+RL
Sbjct: 477 PKNYESGGGHSQPPLI---------------AQLPTMQLPLLPQHLITSGTT--KNCIRL 519
Query: 148 QGLPYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENA 197
+GLPYE E + FL+ I+ G+ + + G+ +G A+IQ +E+A
Sbjct: 520 RGLPYEAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDLEESA 571
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
C +R +GL ++ +D+ KF GL + G+ + GR G A I+FV +E+ + AL
Sbjct: 278 NCIVRARGLLWQSSDQDIAKFFRGLNVAKGGVALCLSPLGRRNGEALIRFVCQEHRDMAL 337
Query: 202 LRHKEKIGHRLVTLVMSGAQWFLS 225
RHK IG R + + + + FL+
Sbjct: 338 KRHKHHIGTRYIEVYRASGEDFLA 361
>gi|426382631|ref|XP_004057907.1| PREDICTED: epithelial splicing regulatory protein 2 isoform 2
[Gorilla gorilla gorilla]
Length = 727
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 87/203 (42%), Gaps = 37/203 (18%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIEL+
Sbjct: 377 FLGPECPVTGGTEGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRS 436
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGI-FCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
++ R G T + I F ++
Sbjct: 437 TAAEVQQVLNRYASGPLLPTLTAPLLPIPFPLA--------------------------P 470
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDK 194
G+ D C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ
Sbjct: 471 GTGRD--CVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSA 528
Query: 195 ENAEKALLR-HKEKIGHRLVTLV 216
E A A R HK+ + R V +V
Sbjct: 529 ERALAAAQRCHKKVMKERYVEVV 551
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 91/209 (43%), Gaps = 53/209 (25%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYM 76
++FFK + + L + GR +GEA + F VD QR ALQRHK +MG RYIE+Y
Sbjct: 274 ARFFKGLNVARGGVALCLNAQGRRNGEALIRF--VDSEQRDLALQRHKHHMGVRYIEVYK 331
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
G + G GT +++FL++
Sbjct: 332 ATGEEFVKIAG-GTS--------------LEVARFLSRE--------------------- 355
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGIT-----IPHDYAGRCTGVAYIQF 191
DQ +RL+GLP+ DV FL G E G T + H GR TG A+ F
Sbjct: 356 ----DQVILRLRGLPFSAGPTDVLGFL-GPECPVTGGTEGLLFVRHP-DGRPTGDAFALF 409
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL RHK +G R + L S A
Sbjct: 410 ACEELAQAALRRHKGMLGKRYIELFRSTA 438
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +DV +F +GL + G+ + + GR G A I+FVD E + AL
Sbjct: 256 ETVVRARGLPWQSSDQDVARFFKGLNVARGGVALCLNAQGRRNGEALIRFVDSEQRDLAL 315
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + F+
Sbjct: 316 QRHKHHMGVRYIEVYKATGEEFV 338
>gi|74761482|sp|Q9H6T0.1|ESRP2_HUMAN RecName: Full=Epithelial splicing regulatory protein 2; AltName:
Full=RNA-binding motif protein 35B; AltName:
Full=RNA-binding protein 35B
gi|10438126|dbj|BAB15173.1| unnamed protein product [Homo sapiens]
gi|119603620|gb|EAW83214.1| RNA binding motif protein 35B, isoform CRA_a [Homo sapiens]
Length = 727
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 87/203 (42%), Gaps = 37/203 (18%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIEL+
Sbjct: 377 FLGPECPVTGGTEGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRS 436
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGI-FCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
++ R G T + I F ++
Sbjct: 437 TAAEVQQVLNRYASGPLLPTLTAPLLPIPFPLA--------------------------P 470
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDK 194
G+ D C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ
Sbjct: 471 GTGRD--CVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSA 528
Query: 195 ENAEKALLR-HKEKIGHRLVTLV 216
E A A R HK+ + R V +V
Sbjct: 529 ERALAAAQRCHKKVMKERYVEVV 551
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 91/209 (43%), Gaps = 53/209 (25%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYM 76
++FFK + + L + GR +GEA + F VD QR ALQRHK +MG RYIE+Y
Sbjct: 274 ARFFKGLNVARGGVALCLNAQGRRNGEALIRF--VDSEQRDLALQRHKHHMGVRYIEVYK 331
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
G + G GT +++FL++
Sbjct: 332 ATGEEFVKIAG-GTS--------------LEVARFLSRE--------------------- 355
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGIT-----IPHDYAGRCTGVAYIQF 191
DQ +RL+GLP+ DV FL G E G T + H GR TG A+ F
Sbjct: 356 ----DQVILRLRGLPFSAGPTDVLGFL-GPECPVTGGTEGLLFVRHP-DGRPTGDAFALF 409
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL RHK +G R + L S A
Sbjct: 410 ACEELAQAALRRHKGMLGKRYIELFRSTA 438
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +DV +F +GL + G+ + + GR G A I+FVD E + AL
Sbjct: 256 ETVVRARGLPWQSSDQDVARFFKGLNVARGGVALCLNAQGRRNGEALIRFVDSEQRDLAL 315
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + F+
Sbjct: 316 QRHKHHMGVRYIEVYKATGEEFV 338
>gi|338728566|ref|XP_003365697.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 2
[Equus caballus]
Length = 659
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 301
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 302 GEDFLKIAG-GTSN--------------EVAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ ++V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATADEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQV------ 412
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 413 ----------------LNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNVRD--CIRLRGLP 453
Query: 152 YECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM 513
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 514 KDRYVEVFQCSAE 526
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGTRYIEVYKATGEDFL 306
>gi|410987479|ref|XP_004000028.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 1
[Felis catus]
Length = 677
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 301
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 302 GEDFLKIAG-GTSNE--------------VAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ ++V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATADEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQV------ 412
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 413 ----------------LNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNVRD--CIRLRGLP 453
Query: 152 YECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM 513
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 514 KDRYVEVFQCSAE 526
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DNTIVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGTRYIEVYKATGEDFL 306
>gi|194214972|ref|XP_001915056.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 1
[Equus caballus]
Length = 677
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVY--- 298
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
+A G G S ++QFL+K
Sbjct: 299 -----KATGEDFLKIAGGTSNE-------VAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ ++V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATADEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQV------ 412
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 413 ----------------LNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNVRD--CIRLRGLP 453
Query: 152 YECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM 513
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 514 KDRYVEVFQCSAE 526
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGTRYIEVYKATGEDFL 306
>gi|74095965|ref|NP_001027829.1| swan [Takifugu rubripes]
gi|31324616|gb|AAP48570.1| swan [Takifugu rubripes]
Length = 889
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 92/202 (45%), Gaps = 30/202 (14%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY------- 75
FF+ + + L D GR +G+A V+F S ++ A++R MG R+IE+
Sbjct: 318 FFRGLGVDAVRFLKDAQGRHTGKAMVKFFSPQESFEAVKRGGGMMGQRFIEINPGSEQQW 377
Query: 76 --MEEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGA 133
+ GT+S+ ++ G KS +++ R+ + Q
Sbjct: 378 ASINNGTASQASHS-------GNKSN--------------IELQQHCRNNSGVEARDQRG 416
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVD 193
+ C+ L+GLPYE K+ +++F L I+ + I I + GR TG +++F
Sbjct: 417 RSRSPHRQEFCIYLKGLPYEADKKQIKEFFNNLAIIEDSIYIAYGPNGRATGEGFLEFKT 476
Query: 194 KENAEKALLRHKEKIGHRLVTL 215
+++ + AL H + +G R + +
Sbjct: 477 EQDHKAALGAHMQYMGSRFIQV 498
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 79/197 (40%), Gaps = 45/197 (22%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
+FF I+ +I + GR++GE +EF + D + AL H MG R+I+++
Sbjct: 444 EFFNNLAIIEDSIYIAYGPNGRATGEGFLEFKTEQDHKAALGAHMQYMGSRFIQVH---- 499
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQ-----GAV 134
R+ ++D KR+ G
Sbjct: 500 ----------------------------------PVSRKGMLEKIDAIRKREASHGGGKS 525
Query: 135 LSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDK 194
GS + C+ + +PY K+DV FLEG+ + + + + D G G + Q +
Sbjct: 526 QDGSKNPRNCVHITNIPYNISKKDVRAFLEGVGLYEDSLKVLTDSHGNGLGQSIFQLRSE 585
Query: 195 ENAEKALLRHKEKIGHR 211
E+A KA H++K+ R
Sbjct: 586 EDARKAERLHRQKLNGR 602
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D+ + LQ LP+ C + DV F GL + + + D GR TG A ++F + + +A
Sbjct: 297 DELFVLLQNLPFTCTEVDVRGFFRGLGV--DAVRFLKDAQGRHTGKAMVKFFSPQESFEA 354
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFLS 225
+ R +G R + + Q + S
Sbjct: 355 VKRGGGMMGQRFIEINPGSEQQWAS 379
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAE 198
A ++LQ +P+ +++ F G ++VP + + G TG A + F + E A
Sbjct: 809 AAGPTVVKLQNMPFTVTVDEIMDFFYGYQVVPGSVCLQFSEKGLPTGEAMVAFQNHEEAT 868
Query: 199 KALLRHKEK-IGHRLVTLVM 217
A+L ++ IG R V + +
Sbjct: 869 AAVLDLNDRPIGARKVKISL 888
>gi|45935393|ref|NP_079215.2| epithelial splicing regulatory protein 2 [Homo sapiens]
gi|20988380|gb|AAH30146.1| Epithelial splicing regulatory protein 2 [Homo sapiens]
gi|119603622|gb|EAW83216.1| RNA binding motif protein 35B, isoform CRA_c [Homo sapiens]
Length = 717
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 87/203 (42%), Gaps = 37/203 (18%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIEL+
Sbjct: 367 FLGPECPVTGGTEGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRS 426
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGI-FCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
++ R G T + I F ++
Sbjct: 427 TAAEVQQVLNRYASGPLLPTLTAPLLPIPFPLA--------------------------P 460
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDK 194
G+ D C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ
Sbjct: 461 GTGRD--CVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSA 518
Query: 195 ENAEKALLR-HKEKIGHRLVTLV 216
E A A R HK+ + R V +V
Sbjct: 519 ERALAAAQRCHKKVMKERYVEVV 541
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 91/209 (43%), Gaps = 53/209 (25%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYM 76
++FFK + + L + GR +GEA + F VD QR ALQRHK +MG RYIE+Y
Sbjct: 264 ARFFKGLNVARGGVALCLNAQGRRNGEALIRF--VDSEQRDLALQRHKHHMGVRYIEVYK 321
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
G + G GT +++FL++
Sbjct: 322 ATGEEFVKIAG-GTS--------------LEVARFLSRE--------------------- 345
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGIT-----IPHDYAGRCTGVAYIQF 191
DQ +RL+GLP+ DV FL G E G T + H GR TG A+ F
Sbjct: 346 ----DQVILRLRGLPFSAGPTDVLGFL-GPECPVTGGTEGLLFVRHP-DGRPTGDAFALF 399
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL RHK +G R + L S A
Sbjct: 400 ACEELAQAALRRHKGMLGKRYIELFRSTA 428
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +DV +F +GL + G+ + + GR G A I+FVD E + AL
Sbjct: 246 ETVVRARGLPWQSSDQDVARFFKGLNVARGGVALCLNAQGRRNGEALIRFVDSEQRDLAL 305
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + F+
Sbjct: 306 QRHKHHMGVRYIEVYKATGEEFV 328
>gi|426382629|ref|XP_004057906.1| PREDICTED: epithelial splicing regulatory protein 2 isoform 1
[Gorilla gorilla gorilla]
Length = 717
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 87/203 (42%), Gaps = 37/203 (18%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIEL+
Sbjct: 367 FLGPECPVTGGTEGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRS 426
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGI-FCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
++ R G T + I F ++
Sbjct: 427 TAAEVQQVLNRYASGPLLPTLTAPLLPIPFPLA--------------------------P 460
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDK 194
G+ D C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ
Sbjct: 461 GTGRD--CVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSA 518
Query: 195 ENAEKALLR-HKEKIGHRLVTLV 216
E A A R HK+ + R V +V
Sbjct: 519 ERALAAAQRCHKKVMKERYVEVV 541
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 91/209 (43%), Gaps = 53/209 (25%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYM 76
++FFK + + L + GR +GEA + F VD QR ALQRHK +MG RYIE+Y
Sbjct: 264 ARFFKGLNVARGGVALCLNAQGRRNGEALIRF--VDSEQRDLALQRHKHHMGVRYIEVYK 321
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
G + G GT +++FL++
Sbjct: 322 ATGEEFVKIAG-GTS--------------LEVARFLSRE--------------------- 345
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGIT-----IPHDYAGRCTGVAYIQF 191
DQ +RL+GLP+ DV FL G E G T + H GR TG A+ F
Sbjct: 346 ----DQVILRLRGLPFSAGPTDVLGFL-GPECPVTGGTEGLLFVRHP-DGRPTGDAFALF 399
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL RHK +G R + L S A
Sbjct: 400 ACEELAQAALRRHKGMLGKRYIELFRSTA 428
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +DV +F +GL + G+ + + GR G A I+FVD E + AL
Sbjct: 246 ETVVRARGLPWQSSDQDVARFFKGLNVARGGVALCLNAQGRRNGEALIRFVDSEQRDLAL 305
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + F+
Sbjct: 306 QRHKHHMGVRYIEVYKATGEEFV 328
>gi|410987483|ref|XP_004000030.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 3
[Felis catus]
Length = 604
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVY--- 298
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
+A G G S ++QFL+K
Sbjct: 299 -----KATGEDFLKIAGGTSNE-------VAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ ++V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATADEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 28/193 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++ R +
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSS 418
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
TP + + QF+ R C+RL+GLP
Sbjct: 419 APLIPLPTPPIIPVL-PQQFVPPTNVRD------------------------CIRLRGLP 453
Query: 152 YECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM 513
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 514 KDRYVEVFQCSAE 526
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DNTIVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGTRYIEVYKATGEDFL 306
>gi|301782433|ref|XP_002926629.1| PREDICTED: epithelial splicing regulatory protein 1-like
[Ailuropoda melanoleuca]
Length = 677
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 301
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 302 GEDFLKIAG-GTSNE--------------VAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ ++V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATADEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQV------ 412
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 413 ----------------LNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNVRD--CIRLRGLP 453
Query: 152 YECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM 513
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 514 KDRYVEVFQCSAE 526
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DNTIVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGTRYIEVYKATGEDFL 306
>gi|444709335|gb|ELW50356.1| Epithelial splicing regulatory protein 2 [Tupaia chinensis]
Length = 848
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 86/202 (42%), Gaps = 35/202 (17%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIEL+
Sbjct: 498 FLGPDCPVTGGAEGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRS 557
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++A R + S L A +G
Sbjct: 558 TAAEVQQALTR-----------------YASSPLLPTLTAPLLPIPFPLA--------AG 592
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ D C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ E
Sbjct: 593 TGRD--CVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAE 650
Query: 196 NAEKALLR-HKEKIGHRLVTLV 216
A A R HK+ + R V +V
Sbjct: 651 RALAAAQRCHKKVMKERYVEVV 672
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 83/202 (41%), Gaps = 61/202 (30%)
Query: 31 NILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYMEEGTSSKEANGR 88
+ L + GR +GEA + F VD QR ALQRHK +MG RYIE+Y G + G
Sbjct: 407 GVALCLNAQGRRNGEALIRF--VDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAG- 463
Query: 89 GTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQ 148
GT +++FL++ DQ +RL+
Sbjct: 464 GTS--------------LEVARFLSRE-------------------------DQVILRLR 484
Query: 149 GLPYECKKEDVEKFL----------EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAE 198
GLP+ DV FL EGL V GR TG A+ F +E A+
Sbjct: 485 GLPFSAGPTDVLGFLGPDCPVTGGAEGLLFV-------RHPDGRPTGDAFALFACEELAQ 537
Query: 199 KALLRHKEKIGHRLVTLVMSGA 220
AL RHK +G R + L S A
Sbjct: 538 AALRRHKGMLGKRYIELFRSTA 559
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +DV +F GL I G+ + + GR G A I+FVD E + AL
Sbjct: 377 ETVVRARGLPWQSSDQDVARFFRGLNIARGGVALCLNAQGRRNGEALIRFVDSEQRDLAL 436
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + F+
Sbjct: 437 QRHKHHMGVRYIEVYKATGEEFV 459
>gi|410987481|ref|XP_004000029.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 2
[Felis catus]
Length = 659
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVY--- 298
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
+A G G S ++QFL+K
Sbjct: 299 -----KATGEDFLKIAGGTSNE-------VAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ ++V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATADEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQV------ 412
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 413 ----------------LNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNVRD--CIRLRGLP 453
Query: 152 YECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM 513
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 514 KDRYVEVFQCSAE 526
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DNTIVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGTRYIEVYKATGEDFL 306
>gi|335286312|ref|XP_003125612.2| PREDICTED: epithelial splicing regulatory protein 1-like isoform 1
[Sus scrofa]
Length = 681
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 301
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 302 GEDFLKIAG-GTSNE--------------VAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ ++V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATADEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 109/256 (42%), Gaps = 47/256 (18%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQV------ 412
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 413 ----------------LNRFSSAPLIPLPTPPIIPVLPQQ-FVTPTNVRD--CIRLRGLP 453
Query: 152 YECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM 513
Query: 209 GHRLVTLVMSGAQWF-------------LSPP---LTNETPISRLDLTGSPVRSTICVLC 252
R V + A+ LSPP L +P S + V T +
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 573
Query: 253 HP---LTPRSVRPRSV 265
P L PR+++P +
Sbjct: 574 QPSVLLNPRALQPSTA 589
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGTRYIEVYKATGEDFL 306
>gi|326917907|ref|XP_003205236.1| PREDICTED: epithelial splicing regulatory protein 1-like [Meleagris
gallopavo]
Length = 671
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F + + ALQRHK +MG+RYIE+Y
Sbjct: 241 AKFFKGLNIAKGGAALCLNAQGRRNGEALVRFVNEEHRDLALQRHKHHMGNRYIEVY--- 297
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
+A G G S ++QFL+K
Sbjct: 298 -----KATGEDFLKIAGGTSNE-------VAQFLSKE----------------------- 322
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F V G +T P R TG A++ F
Sbjct: 323 --NQVIVRMRGLPFNVTTEEVLAFFGQHCPVTGGKEGVLFVTYPD---SRPTGDAFVLFA 377
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 378 CEEYAQNALKKHKDLLGRRYIELFRSTA 405
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ KF +GL I G + + GR G A ++FV++E+ + A
Sbjct: 222 DNAVIRARGLPWQSSDQDIAKFFKGLNIAKGGAALCLNAQGRRNGEALVRFVNEEHRDLA 281
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G+R + + + + FL
Sbjct: 282 LQRHKHHMGNRYIEVYKATGEDFL 305
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 39/210 (18%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF PV +L +T R +G+A V F+ + AQ AL++HK +G RYIEL+
Sbjct: 344 FFGQHCPVTGGKEGVLFVTYPDSRPTGDAFVLFACEEYAQNALKKHKDLLGRRYIELFRS 403
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ R + + + Q V
Sbjct: 404 TAAEVQQVLNR-----------------------YSSTPLIPLPTPPILPVLPQQFVPPT 440
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ D C+RL+GLPY ED+ FL +I +G+ + ++ GR +G A+IQ +
Sbjct: 441 NVRD--CIRLRGLPYAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQM---K 495
Query: 196 NAEKALLR----HKEKIGHRLVTLVMSGAQ 221
+A++A L HK+ + R + + A+
Sbjct: 496 SADRAFLAAQKCHKKTMKDRYIEVFQCSAE 525
>gi|386768028|ref|NP_001246347.1| fusilli, isoform H [Drosophila melanogaster]
gi|383302505|gb|AFH08101.1| fusilli, isoform H [Drosophila melanogaster]
Length = 526
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 23/172 (13%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+L + GR++G+A V F++ DA +AL RH+ ++G RYIEL+ ++ R
Sbjct: 83 VLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQRYIELFRSTTAEVQQVLNRSMD 142
Query: 92 G----FGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRL 147
GG S P + A+ M L Q + SG+ + C+RL
Sbjct: 143 PKNYESGGGHSQPPLI---------------AQLPTMQLPLLPQHLITSGTTKN--CIRL 185
Query: 148 QGLPYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENA 197
+GLPYE E + FL+ I+ G+ + + G+ +G A+IQ +E+A
Sbjct: 186 RGLPYEAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQMDLEESA 237
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 68/167 (40%), Gaps = 47/167 (28%)
Query: 59 ALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRR 118
AL+RHK ++G RYIE+Y G FLA
Sbjct: 2 ALKRHKHHIGTRYIEVYRASG-----------------------------EDFLAIAGGA 32
Query: 119 AKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVP-------N 171
+ ++ A LS A Q +R++GLPY+ + V F + P
Sbjct: 33 SNEAQ---------AFLSKGA--QVIIRMRGLPYDATAKQVLDFFTTGDTPPCHVLDGNE 81
Query: 172 GITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
G+ GR TG A++ F ++ +A KAL RH+E IG R + L S
Sbjct: 82 GVLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQRYIELFRS 128
>gi|17865825|ref|NP_524691.1| fusilli, isoform D [Drosophila melanogaster]
gi|24653906|ref|NP_725481.1| fusilli, isoform E [Drosophila melanogaster]
gi|24653908|ref|NP_725482.1| fusilli, isoform F [Drosophila melanogaster]
gi|75021514|sp|Q9BJZ5.1|FUSIL_DROME RecName: Full=RNA-binding protein fusilli
gi|13183640|gb|AAK15280.1|AF321979_1 fusilli [Drosophila melanogaster]
gi|21645395|gb|AAM70981.1| fusilli, isoform D [Drosophila melanogaster]
gi|21645396|gb|AAM70982.1| fusilli, isoform E [Drosophila melanogaster]
gi|21645397|gb|AAM70983.1| fusilli, isoform F [Drosophila melanogaster]
Length = 967
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 77/186 (41%), Gaps = 47/186 (25%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR +GEA + F + AL+RHK ++G RYIE+Y G
Sbjct: 317 GRRNGEALIRFVCQEHRDMALKRHKHHIGTRYIEVYRASG-------------------- 356
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
FLA + ++ A LS A Q +R++GLPY+ + V
Sbjct: 357 ---------EDFLAIAGGASNEAQ---------AFLSKGA--QVIIRMRGLPYDATAKQV 396
Query: 160 EKFLEGLEIVP-------NGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRL 212
F + P G+ GR TG A++ F ++ +A KAL RH+E IG R
Sbjct: 397 LDFFTTGDTPPCHVLDGNEGVLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQRY 456
Query: 213 VTLVMS 218
+ L S
Sbjct: 457 IELFRS 462
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
C +R +GLP++ +D+ KF GL + G+ + GR G A I+FV +E+ + AL
Sbjct: 278 NCIVRARGLPWQSSDQDIAKFFRGLNVAKGGVALCLSPLGRRNGEALIRFVCQEHRDMAL 337
Query: 202 LRHKEKIGHRLVTLVMSGAQWFLS 225
RHK IG R + + + + FL+
Sbjct: 338 KRHKHHIGTRYIEVYRASGEDFLA 361
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 81/186 (43%), Gaps = 20/186 (10%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+L + GR++G+A V F++ DA +AL RH+ ++G RYIEL+ ++ R
Sbjct: 417 VLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQRYIELFRSTTAEVQQVLNRSMD 476
Query: 92 G----FGGVKSTP--------------YGVGIFCISQFLAKWMRRAKRSEMDWALKRQGA 133
GG S P VG +S L AL
Sbjct: 477 PKNYESGGGHSQPPLIAQLPTMQLPLLPQVGAHSLSHSLGASPANLCPPVPPPALPLPTQ 536
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQF 191
L S + C+RL+GLPYE E + FL+ I+ G+ + + G+ +G A+IQ
Sbjct: 537 HLITSGTTKNCIRLRGLPYEAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQM 596
Query: 192 VDKENA 197
+E+A
Sbjct: 597 DLEESA 602
>gi|229485446|sp|B2RYJ8.1|ESRP2_RAT RecName: Full=Epithelial splicing regulatory protein 2; AltName:
Full=RNA-binding motif protein 35B; AltName:
Full=RNA-binding protein 35B
gi|187469463|gb|AAI66804.1| Rbm35b protein [Rattus norvegicus]
Length = 716
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 87/206 (42%), Gaps = 47/206 (22%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I + L + GR +GEA + F + ALQRHK +MG RYIE+Y
Sbjct: 263 ARFFKGLNIARGGVALCLNAQGRRNGEALIRFEDSEQRDLALQRHKHHMGVRYIEVYKAT 322
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT +++FL++
Sbjct: 323 GEEFVKIAG-GTS--------------LEVARFLSRE----------------------- 344
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGIT----IPHDYAGRCTGVAYIQFVDK 194
DQ +RL+GLP+ DV FL V G+ + H GR TG A+ F +
Sbjct: 345 --DQVILRLRGLPFSAGPADVLDFLGPECPVTGGVDGLLFVRHP-DGRPTGDAFALFACE 401
Query: 195 ENAEKALLRHKEKIGHRLVTLVMSGA 220
E A+ AL RHK +G R + L S A
Sbjct: 402 ELAQAALRRHKGMLGKRYIELFRSTA 427
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 86/202 (42%), Gaps = 35/202 (17%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIEL+
Sbjct: 366 FLGPECPVTGGVDGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRS 425
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
+ Q L ++ + L L+G
Sbjct: 426 TAAE--------------------------VQQVLNRYAASPLLPTLTAPLLPIPFPLAG 459
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ + E
Sbjct: 460 -GTGRDCVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMMSVE 518
Query: 196 NAEKALLR-HKEKIGHRLVTLV 216
A A R HK+ + R V +V
Sbjct: 519 RALAAAQRCHKKVMKERYVEVV 540
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
++ +R +GLP++ +DV +F +GL I G+ + + GR G A I+F D E + A
Sbjct: 244 NETVVRARGLPWQSSDQDVARFFKGLNIARGGVALCLNAQGRRNGEALIRFEDSEQRDLA 303
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + F+
Sbjct: 304 LQRHKHHMGVRYIEVYKATGEEFV 327
>gi|157818053|ref|NP_001100893.1| epithelial splicing regulatory protein 2 [Rattus norvegicus]
gi|149038076|gb|EDL92436.1| RNA binding motif protein 35b (predicted) [Rattus norvegicus]
Length = 717
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 87/206 (42%), Gaps = 47/206 (22%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I + L + GR +GEA + F + ALQRHK +MG RYIE+Y
Sbjct: 264 ARFFKGLNIARGGVALCLNAQGRRNGEALIRFEDSEQRDLALQRHKHHMGVRYIEVYKAT 323
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT +++FL++
Sbjct: 324 GEEFVKIAG-GTS--------------LEVARFLSRE----------------------- 345
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGIT----IPHDYAGRCTGVAYIQFVDK 194
DQ +RL+GLP+ DV FL V G+ + H GR TG A+ F +
Sbjct: 346 --DQVILRLRGLPFSAGPADVLDFLGPECPVTGGVDGLLFVRHP-DGRPTGDAFALFACE 402
Query: 195 ENAEKALLRHKEKIGHRLVTLVMSGA 220
E A+ AL RHK +G R + L S A
Sbjct: 403 ELAQAALRRHKGMLGKRYIELFRSTA 428
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 86/202 (42%), Gaps = 35/202 (17%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIEL+
Sbjct: 367 FLGPECPVTGGVDGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRS 426
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
+ Q L ++ + L L+G
Sbjct: 427 TAAE--------------------------VQQVLNRYAASPLLPTLTAPLLPIPFPLAG 460
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ + E
Sbjct: 461 -GTGRDCVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMMSVE 519
Query: 196 NAEKALLR-HKEKIGHRLVTLV 216
A A R HK+ + R V +V
Sbjct: 520 RALAAAQRCHKKVMKERYVEVV 541
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
++ +R +GLP++ +DV +F +GL I G+ + + GR G A I+F D E + A
Sbjct: 245 NETVVRARGLPWQSSDQDVARFFKGLNIARGGVALCLNAQGRRNGEALIRFEDSEQRDLA 304
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + F+
Sbjct: 305 LQRHKHHMGVRYIEVYKATGEEFV 328
>gi|198421641|ref|XP_002120551.1| PREDICTED: similar to RNA-binding protein 35B (RNA-binding motif
protein 35B) [Ciona intestinalis]
Length = 772
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 92/210 (43%), Gaps = 44/210 (20%)
Query: 22 QFFKPIVPV-----NILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
+FF +PV +LL+ GR +G+A V F+S A AL +HK +G RY+E++
Sbjct: 372 EFFGDEIPVAHGEEGVLLVKFADGRPTGDAFVLFTSEKFAVAALNKHKLTLGKRYVEIF- 430
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWA---LKRQGA 133
KST V Q L++ M M Q
Sbjct: 431 --------------------KSTAAEV-----QQVLSRHMTSPIIPTMPSPHILPPPQQP 465
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQF 191
V +G+ + C+RL+G+PY ED+ FL L I+P+GI + + GR +G A+IQ
Sbjct: 466 VPAGAIRN--CIRLRGMPYSATVEDITSFLGELANSILPHGIHMVLNQQGRPSGDAFIQL 523
Query: 192 VDKENAEKALLR------HKEKIGHRLVTL 215
E +A L HK +G R V +
Sbjct: 524 SSVEKCSQAALDVSKGGCHKRHMGERYVEV 553
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 77/191 (40%), Gaps = 45/191 (23%)
Query: 34 LLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGF 93
L+ + GR +GEA V F + AL RHK +M RYIE+Y G
Sbjct: 285 LVLNPQGRRNGEALVRFENEQQRDLALLRHKHHMASRYIEVYRASG-------------- 330
Query: 94 GGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYE 153
+FL + E L ++G + +R++GLP+
Sbjct: 331 ---------------DEFLK--VAAGSSCEAIHFLSKEG---------EAIVRMRGLPFT 364
Query: 154 CKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIG 209
D+ +F G EI G+ + GR TG A++ F ++ A AL +HK +G
Sbjct: 365 AGPRDIVEFF-GDEIPVAHGEEGVLLVKFADGRPTGDAFVLFTSEKFAVAALNKHKLTLG 423
Query: 210 HRLVTLVMSGA 220
R V + S A
Sbjct: 424 KRYVEIFKSTA 434
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ DV +F +GL I G + + GR G A ++F +++ + A
Sbjct: 251 DNTVVRARGLPWQASDHDVARFFKGLNIPRGGAALVLNPQGRRNGEALVRFENEQQRDLA 310
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
LLRHK + R + + + FL
Sbjct: 311 LLRHKHHMASRYIEVYRASGDEFL 334
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 135 LSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDK 194
++G + +R+QG+PY D+ F +G + I + ++ R TG A + F
Sbjct: 688 ITGVPGNGVQVRMQGMPYNAGVADIMAFFKGYNLNSESIKLIYNDKLRPTGEALVTFPSL 747
Query: 195 ENAEKALLRHKEKI-GHRLVTLVM 217
E + +A++ + K+ G+R + L++
Sbjct: 748 EESHRAVVENNRKLMGNRYIELLL 771
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDD-AQRALQR-----HKSNMGDRYIELYMEEGT 80
I+P I ++ + GR SG+A ++ SSV+ +Q AL HK +MG+RY+E++ G
Sbjct: 500 ILPHGIHMVLNQQGRPSGDAFIQLSSVEKCSQAALDVSKGGCHKRHMGERYVEVFQCSGD 559
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQ 110
GT G+ P G+ +SQ
Sbjct: 560 EMNMVLMGGTLNRNGMLPPP---GMAILSQ 586
>gi|28849887|ref|NP_789808.1| epithelial splicing regulatory protein 2 [Mus musculus]
gi|81914552|sp|Q8K0G8.1|ESRP2_MOUSE RecName: Full=Epithelial splicing regulatory protein 2; AltName:
Full=RNA-binding motif protein 35B; AltName:
Full=RNA-binding protein 35B
gi|21618665|gb|AAH31444.1| RNA binding motif protein 35b [Mus musculus]
gi|148679398|gb|EDL11345.1| RNA binding motif protein 35b [Mus musculus]
Length = 717
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 86/202 (42%), Gaps = 35/202 (17%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIEL+
Sbjct: 367 FLGPECPVTGGADGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRS 426
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
+ Q L ++ + L L+G
Sbjct: 427 TAAE--------------------------VQQVLNRYAASPLLPTLTAPLLPIPFPLAG 460
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ + E
Sbjct: 461 -GTGRDCVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMMSVE 519
Query: 196 NAEKALLR-HKEKIGHRLVTLV 216
A A R HK+ + R V +V
Sbjct: 520 RALAAAQRCHKKMMKERYVEVV 541
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 90/208 (43%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYM 76
++FFK I + L + GR +GEA + F VD QR ALQRHK +MG RYIE+Y
Sbjct: 264 ARFFKGLNIARGGVALCLNAQGRRNGEALIRF--VDSEQRDLALQRHKHHMGVRYIEVYK 321
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
G + G GT +++FL++
Sbjct: 322 ATGEEFVKIAG-GTS--------------LEVARFLSRE--------------------- 345
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFV 192
DQ +RL+GLP+ DV FL G E +G+ GR TG A+ F
Sbjct: 346 ----DQVILRLRGLPFSAGPTDVLGFL-GPECPVTGGADGLLFVRHPDGRPTGDAFALFA 400
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL RHK +G R + L S A
Sbjct: 401 CEELAQAALRRHKGMLGKRYIELFRSTA 428
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
++ +R +GLP++ +DV +F +GL I G+ + + GR G A I+FVD E + A
Sbjct: 245 NETVVRARGLPWQSSDQDVARFFKGLNIARGGVALCLNAQGRRNGEALIRFVDSEQRDLA 304
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + F+
Sbjct: 305 LQRHKHHMGVRYIEVYKATGEEFV 328
>gi|108743797|gb|ABG02207.1| IP16182p [Drosophila melanogaster]
Length = 694
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 77/186 (41%), Gaps = 47/186 (25%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR +GEA + F + AL+RHK ++G RYIE+Y G
Sbjct: 317 GRRNGEALIRFVCQEHRDMALKRHKHHIGTRYIEVYRASG-------------------- 356
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
FLA + ++ A LS A Q +R++GLPY+ + V
Sbjct: 357 ---------EDFLAIAGGASNEAQ---------AFLSKGA--QVIIRMRGLPYDATAKQV 396
Query: 160 EKFLEGLEIVP-------NGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRL 212
F + P G+ GR TG A++ F ++ +A KAL RH+E IG R
Sbjct: 397 LDFFTTGDTPPCHVLDGNEGVLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQRY 456
Query: 213 VTLVMS 218
+ L S
Sbjct: 457 IELFRS 462
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
C +R +GLP++ +D+ KF GL + G+ + GR G A I+FV +E+ + AL
Sbjct: 278 NCIVRARGLPWQSSDQDIAKFFRGLNVAKGGVALCLSPLGRRNGEALIRFVCQEHRDMAL 337
Query: 202 LRHKEKIGHRLVTLVMSGAQWFLS 225
RHK IG R + + + + FL+
Sbjct: 338 KRHKHHIGTRYIEVYRASGEDFLA 361
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 81/186 (43%), Gaps = 20/186 (10%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+L + GR++G+A V F++ DA +AL RH+ ++G RYIEL+ ++ R
Sbjct: 417 VLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQRYIELFRSTTAEVQQVLNRSMD 476
Query: 92 ----GFGGVKSTP--------------YGVGIFCISQFLAKWMRRAKRSEMDWALKRQGA 133
GG S P VG +S L AL
Sbjct: 477 PKNYESGGGHSQPPLIAQLPTMQLPLLPQVGAHSLSHSLGASPANLCPPVPPPALPLPTQ 536
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQF 191
L S + C+RL+GLPYE E + FL+ I+ G+ + + G+ +G A+IQ
Sbjct: 537 HLITSGTTKNCIRLRGLPYEAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQM 596
Query: 192 VDKENA 197
+E+A
Sbjct: 597 DLEESA 602
>gi|239052941|ref|NP_001131830.2| uncharacterized protein LOC100193205 [Zea mays]
gi|223943183|gb|ACN25675.1| unknown [Zea mays]
gi|238908614|gb|ACF80415.2| unknown [Zea mays]
Length = 241
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 24/199 (12%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF + V+ LL+ + GR +GEA V F + + AL R++ NMG RY+E++ +
Sbjct: 51 KFFVGLDIVDCLLVNKN-GRFTGEAFVVFPTAMQTEFALHRNRQNMGRRYVEVFRCKKLE 109
Query: 82 SKEA--NGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA 139
A N GG+ F +++ +RS + ++ A GS
Sbjct: 110 YYRAIANEVSQGGY-----------------FESEY----RRSSPPLSPPKKPAEDKGSM 148
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
++L+GLPY ED+ KF E+ + I G+ TG A+++F E A+
Sbjct: 149 EYTEVLKLRGLPYSATTEDIIKFFLEYELTEENVHIAISSDGKATGEAFVEFPTTEVAKT 208
Query: 200 ALLRHKEKIGHRLVTLVMS 218
+ + K IG R V L S
Sbjct: 209 VMCKDKMTIGTRYVELFPS 227
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RL+GLP++C D+ KF GL+IV + + GR TG A++ F E AL R+
Sbjct: 35 VRLRGLPFDCNDIDICKFFVGLDIVD---CLLVNKNGRFTGEAFVVFPTAMQTEFALHRN 91
Query: 205 KEKIGHRLVTL 215
++ +G R V +
Sbjct: 92 RQNMGRRYVEV 102
>gi|193786713|dbj|BAG52036.1| unnamed protein product [Homo sapiens]
Length = 568
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 85 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEVDYKAALCRHKQYMGNRFIQVH----P 140
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 141 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMILNPEGDVNSA--- 178
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K+
Sbjct: 179 -KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKS 237
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 238 ERLHRKKLNGR 248
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 46/72 (63%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ L+GLP+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL R
Sbjct: 67 CVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEVDYKAALCR 126
Query: 204 HKEKIGHRLVTL 215
HK+ +G+R + +
Sbjct: 127 HKQYMGNRFIQV 138
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 492 TVIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVI 551
Query: 203 RHKEK-IGHRLVTLVM 217
++ IG R V LV+
Sbjct: 552 DLNDRPIGSRKVKLVL 567
>gi|297797787|ref|XP_002866778.1| RNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297312613|gb|EFH43037.1| RNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 255
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 94/196 (47%), Gaps = 26/196 (13%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY--MEEG 79
+FF + V++LL++ + G+ SGEA V F+ + +LQR + NMG RY+E++ ++
Sbjct: 67 KFFSGLDIVDVLLVSKN-GKFSGEAFVVFAGPMQVEISLQRDRHNMGRRYVEVFRCSKQD 125
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA 139
+ A G + S P V ++ R +++ ++++
Sbjct: 126 YYNAVAAEEGAYEYEARASPPPTV--------PSRAKRFSEKEKLEYTE----------- 166
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
++++GLPY K + +F G +++ + + G+ TG A+++F E A +
Sbjct: 167 ----VLKMRGLPYSVNKPQIIEFFSGYKVIEGRVQVVCRPDGKATGEAFVEFETGEEARR 222
Query: 200 ALLRHKEKIGHRLVTL 215
A+ + K IG R V L
Sbjct: 223 AMAKDKMSIGSRYVEL 238
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
G A +RL+GLP+ C D+ KF GL+IV + + + + G+ +G A++ F
Sbjct: 43 GYACGFPVVRLRGLPFNCADIDIFKFFSGLDIV-DVLLVSKN--GKFSGEAFVVFAGPMQ 99
Query: 197 AEKALLRHKEKIGHRLVTLVMSGAQWFLS 225
E +L R + +G R V + Q + +
Sbjct: 100 VEISLQRDRHNMGRRYVEVFRCSKQDYYN 128
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 29/36 (80%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
G+++GEA VEF + ++A+RA+ + K ++G RY+EL+
Sbjct: 204 GKATGEAFVEFETGEEARRAMAKDKMSIGSRYVELF 239
>gi|46195836|ref|NP_996869.1| RNA-binding protein 12 [Gallus gallus]
gi|37932175|gb|AAP69823.1| SWAN ribonucleoprotein [Gallus gallus]
Length = 887
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 24/209 (11%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I +L D GR++G V+F S D AL+R++ M RY+E+ + + E G
Sbjct: 332 IHMLKDHVGRNNGNGLVKFFSPQDTFEALKRNRMLMIQRYVEV-----SPATERQWVAAG 386
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQC-CMRLQGL 150
G K T + Q + RS+ KR S S +Q C+ L+GL
Sbjct: 387 GHITFKQT-----MGPSGQPHPPPPQPHFRSKSPSGQKRS---RSRSPHEQGFCVYLKGL 438
Query: 151 PYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGH 210
P+E + + V F + L+IV + I I + G+ G +++F ++ + + AL HK+ IG+
Sbjct: 439 PFESENKHVIDFFKKLDIVEDSIYIAYGPNGKAIGEGFVEFRNEADYKAALCHHKQYIGN 498
Query: 211 RLVTLVMSGAQWFLSPPLTNETPISRLDL 239
R + + P+T + + ++DL
Sbjct: 499 RFIQVH----------PITKKAMLEKIDL 517
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 29/195 (14%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G++ GE VEF + D + AL HK +G+R+I+++
Sbjct: 450 FFKKLDIVEDSIYIAYGPNGKAIGEGFVEFRNEADYKAALCHHKQYIGNRFIQVHPITKK 509
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+ E I I + L + + M+ + SGS
Sbjct: 510 AMLEK-------------------IDLIRKRLQNFNYDQREIIMNAEAE------SGSP- 543
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +PY K ++ +FLEGL + N + I D G+ G A +QF +++A KA
Sbjct: 544 -KLCAHISNIPYNITKMEILQFLEGLAVEENSVQILVDNNGQGLGQALVQFKAEDDARKA 602
Query: 201 LLRHKEKIGHRLVTL 215
H++K+ R V L
Sbjct: 603 ERLHRKKLNGRDVVL 617
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++
Sbjct: 3 VVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMM 58
Query: 203 RHKEKIGHRLVTLVMS 218
R I VTL++S
Sbjct: 59 RTGGTIKGSKVTLLLS 74
>gi|334312966|ref|XP_003339804.1| PREDICTED: LOW QUALITY PROTEIN: epithelial splicing regulatory
protein 2-like [Monodelphis domestica]
Length = 1253
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 80/182 (43%), Gaps = 49/182 (26%)
Query: 40 GRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVK 97
GR +GEA V F VD QR +L+RHK +MG RYIE+Y G + G GT
Sbjct: 817 GRRTGEALVRF--VDSEQRDLSLERHKHHMGARYIEVYKASGEEFLKIAG-GTS------ 867
Query: 98 STPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKE 157
++QFL++ DQ +R++GLP+
Sbjct: 868 --------HEVAQFLSR-------------------------EDQVIIRMRGLPFTATPG 894
Query: 158 DVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLV 213
DV FL G E P G+ H GR TG A+ F +E A+ AL +HK +G R +
Sbjct: 895 DVLAFL-GPECPVTGGPEGLLFVHYPDGRPTGDAFALFACEELAQGALRKHKGILGKRYI 953
Query: 214 TL 215
L
Sbjct: 954 EL 955
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 89/204 (43%), Gaps = 38/204 (18%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL++HK +G RYIEL
Sbjct: 899 FLGPECPVTGGPEGLLFVHYPDGRPTGDAFALFACEELAQGALRKHKGILGKRYIELS-- 956
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWAL---KRQGAV 134
+ P GV SQ L ++M + L
Sbjct: 957 -------------------GAPPSGV-----SQVLNRYMSSPLIPTLPAPLIPVLPAPFP 992
Query: 135 LSGSAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFV 192
L+G+ V C +RL+GLPY +D+ FL +I P+G+ + + GR +G A+IQ
Sbjct: 993 LAGAGVRDC-VRLRGLPYTASIDDILGFLGEAAGDIRPHGVHMVLNQQGRPSGDAFIQMK 1051
Query: 193 DKENAEKALLR-HKEKIGHRLVTL 215
+ A A R HK+ + R V +
Sbjct: 1052 SADRALVAAQRCHKKMMKERYVEV 1075
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGI-TIPHDYAGRCTGVAYIQFVDKENAEK 199
++ +R +GLP++ +D+ +F +GL I G + GR TG A ++FVD E +
Sbjct: 776 NETVVRARGLPWQSSDQDIARFFKGLNIAKGGRGPCAXNAQGRRTGEALVRFVDSEQRDL 835
Query: 200 ALLRHKEKIGHRLVTLVMSGAQWFL 224
+L RHK +G R + + + + FL
Sbjct: 836 SLERHKHHMGARYIEVYKASGEEFL 860
>gi|223944441|gb|ACN26304.1| unknown [Zea mays]
Length = 284
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 24/199 (12%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF + V+ LL+ + GR +GEA V F + + AL R++ NMG RY+E++ +
Sbjct: 94 KFFVGLDIVDCLLVNKN-GRFTGEAFVVFPTAMQTEFALHRNRQNMGRRYVEVFRCKKLE 152
Query: 82 SKEA--NGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA 139
A N GG+ F +++ +RS + ++ A GS
Sbjct: 153 YYRAIANEVSQGGY-----------------FESEY----RRSSPPLSPPKKPAEDKGSM 191
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
++L+GLPY ED+ KF E+ + I G+ TG A+++F E A+
Sbjct: 192 EYTEVLKLRGLPYSATTEDIIKFFLEYELTEENVHIAISSDGKATGEAFVEFPTTEVAKT 251
Query: 200 ALLRHKEKIGHRLVTLVMS 218
+ + K IG R V L S
Sbjct: 252 VMCKDKMTIGTRYVELFPS 270
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RL+GLP++C D+ KF GL+IV + + GR TG A++ F E AL R+
Sbjct: 78 VRLRGLPFDCNDIDICKFFVGLDIVD---CLLVNKNGRFTGEAFVVFPTAMQTEFALHRN 134
Query: 205 KEKIGHRLVTL 215
++ +G R V +
Sbjct: 135 RQNMGRRYVEV 145
>gi|449448717|ref|XP_004142112.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Cucumis
sativus]
gi|449502606|ref|XP_004161690.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein F-like [Cucumis sativus]
Length = 260
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 25/197 (12%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF + V+IL + + G+ +GE ALQR++ NMG RY+E++
Sbjct: 76 EFFHGLDIVDILFVHKN-GKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQE 134
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
+A F +P R A RS+++ +K SA
Sbjct: 135 YYKAVANEV--FDARGGSP---------------RRSAPRSKLNDEVK-------DSAEH 170
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+RL+GLPY K+D+ F +G + + I + + GR +G A+++F ++++++ A+
Sbjct: 171 TGVLRLRGLPYSAGKDDILDFFKGFNLSEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAM 230
Query: 202 LRHKEKIGHRLVTLVMS 218
+ + +G R + L S
Sbjct: 231 SKDRMTLGSRYIELFPS 247
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP++C + DV +F GL+IV I H G+ TG + + AL R
Sbjct: 59 VVRLRGLPFDCMETDVVEFFHGLDIVD--ILFVHK-NGKFTGEGFCVLGYPLQVDFALQR 115
Query: 204 HKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVRST 247
+++ +G R V + S Q + + NE +R GSP RS
Sbjct: 116 NRQNMGRRYVEIFRSNRQEYYK-AVANEVFDAR---GGSPRRSA 155
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 31 NILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRG 89
+I L + GR SGEA VEFS+ D++ A+ + + +G RYIEL+ EA RG
Sbjct: 201 SIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRG 259
>gi|73957227|ref|XP_851504.1| PREDICTED: epithelial splicing regulatory protein 2 isoform 2
[Canis lupus familiaris]
Length = 717
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 90/208 (43%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYM 76
++FFK I + L + GR +GEA + F VD QR ALQRHK +MG RYIE+Y
Sbjct: 264 ARFFKGLNIARGGVALCLNAQGRRNGEALIRF--VDSEQRDLALQRHKHHMGVRYIEVYK 321
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
G + G GT +++FL++
Sbjct: 322 ATGEEFVKIAG-GTS--------------LEVARFLSRE--------------------- 345
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFV 192
DQ +RL+GLP+ DV FL G E +G+ GR TG A+ F
Sbjct: 346 ----DQVILRLRGLPFSAGPADVLGFL-GPECPVTGGADGLLFVRHPDGRPTGDAFALFA 400
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL RHK +G R + L S A
Sbjct: 401 CEELAQAALRRHKGILGKRYIELFRSTA 428
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 85/202 (42%), Gaps = 35/202 (17%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIEL+
Sbjct: 367 FLGPECPVTGGADGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGILGKRYIELFRS 426
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ R + S L A +G
Sbjct: 427 TAAEVQQVLNR-----------------YASSPLLPALTAPLLPIPFPLA--------AG 461
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ D C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ E
Sbjct: 462 TGRD--CVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAE 519
Query: 196 NAEKALLR-HKEKIGHRLVTLV 216
A A R HK+ + R V +V
Sbjct: 520 RALAAAQRCHKKVMKERYVEVV 541
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +DV +F +GL I G+ + + GR G A I+FVD E + AL
Sbjct: 246 ETVVRARGLPWQSSDQDVARFFKGLNIARGGVALCLNAQGRRNGEALIRFVDSEQRDLAL 305
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + F+
Sbjct: 306 QRHKHHMGVRYIEVYKATGEEFV 328
>gi|301775691|ref|XP_002923260.1| PREDICTED: epithelial splicing regulatory protein 2-like
[Ailuropoda melanoleuca]
gi|281349933|gb|EFB25517.1| hypothetical protein PANDA_012380 [Ailuropoda melanoleuca]
Length = 723
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 90/208 (43%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYM 76
++FFK I + L + GR +GEA + F VD QR ALQRHK +MG RYIE+Y
Sbjct: 270 ARFFKGLNIARGGVALCLNAQGRRNGEALIRF--VDSEQRDLALQRHKHHMGVRYIEVYK 327
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
G + G GT +++FL++
Sbjct: 328 ATGEEFVKIAG-GTS--------------LEVARFLSRE--------------------- 351
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFV 192
DQ +RL+GLP+ DV FL G E +G+ GR TG A+ F
Sbjct: 352 ----DQVILRLRGLPFSAGPADVLGFL-GPECPVTGGADGLLFVRHPDGRPTGDAFALFA 406
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL RHK +G R + L S A
Sbjct: 407 CEELAQAALRRHKGILGKRYIELFRSTA 434
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 85/202 (42%), Gaps = 35/202 (17%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIEL+
Sbjct: 373 FLGPECPVTGGADGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGILGKRYIELFRS 432
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ R + S L A +G
Sbjct: 433 TAAEVQQVLNR-----------------YASSPLLPTLTAPLLPIPFPLA--------AG 467
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ D C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ E
Sbjct: 468 TGRD--CVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAE 525
Query: 196 NAEKALLR-HKEKIGHRLVTLV 216
A A R HK+ + R V +V
Sbjct: 526 RALAAAQRCHKKVMKERYVEVV 547
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +DV +F +GL I G+ + + GR G A I+FVD E + AL
Sbjct: 252 ETVVRARGLPWQSSDQDVARFFKGLNIARGGVALCLNAQGRRNGEALIRFVDSEQRDLAL 311
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + F+
Sbjct: 312 QRHKHHMGVRYIEVYKATGEEFV 334
>gi|428185861|gb|EKX54712.1| hypothetical protein GUITHDRAFT_57099, partial [Guillardia theta
CCMP2712]
Length = 203
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 81/196 (41%), Gaps = 20/196 (10%)
Query: 22 QFFKPIV--PVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
+FF ++ P I + GR +GEA V F D+ ++AL + +MG RY+E++
Sbjct: 18 EFFSGLLVRPHGIFFTSSRDGRPTGEAFVIFERDDEGEKALSLDRKHMGTRYVEVF---- 73
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA 139
S+K R G C+ S + A
Sbjct: 74 KSNKPDLVRLCAG--------------CVPAVAPSMPPSLPPSLPPHPHPHSHPMPGSLA 119
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
++++GLPY K+ DV F + P+G+ + + G +G AY++ +E +
Sbjct: 120 AKDLVVKVRGLPYSAKEADVFDFFCSSNVRPSGVNLIQNARGESSGDAYVELGSEEEVMR 179
Query: 200 ALLRHKEKIGHRLVTL 215
AL H+ GHR + +
Sbjct: 180 ALALHRSNFGHRYLEI 195
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+R++GLP+ ++ED+ +F GL + P+GI GR TG A++ F + EKAL
Sbjct: 2 VRMRGLPFSVREEDIREFFSGLLVRPHGIFFTSSRDGRPTGEAFVIFERDDEGEKALSLD 61
Query: 205 KEKIGHRLVTLVMS 218
++ +G R V + S
Sbjct: 62 RKHMGTRYVEVFKS 75
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 15 TYCLLCSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIEL 74
+ CS + P + L+ + G SSG+A VE S ++ RAL H+SN G RY+E+
Sbjct: 139 VFDFFCSS---NVRPSGVNLIQNARGESSGDAYVELGSEEEVMRALALHRSNFGHRYLEI 195
Query: 75 Y 75
+
Sbjct: 196 F 196
>gi|410983807|ref|XP_003998228.1| PREDICTED: epithelial splicing regulatory protein 2 isoform 1
[Felis catus]
Length = 717
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 90/208 (43%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYM 76
++FFK I + L + GR +GEA + F VD QR ALQRHK +MG RYIE+Y
Sbjct: 264 ARFFKGLNIARGGVALCLNAQGRRNGEALIRF--VDSEQRDLALQRHKHHMGVRYIEVYK 321
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
G + G GT +++FL++
Sbjct: 322 ATGEEFVKIAG-GTS--------------LEVARFLSRE--------------------- 345
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFV 192
DQ +RL+GLP+ DV FL G E +G+ GR TG A+ F
Sbjct: 346 ----DQVILRLRGLPFSAGPADVLGFL-GPECPVTGGADGLLFVRHPDGRPTGDAFALFA 400
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL RHK +G R + L S A
Sbjct: 401 CEELAQAALRRHKGILGKRYIELFRSTA 428
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 85/202 (42%), Gaps = 35/202 (17%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIEL+
Sbjct: 367 FLGPECPVTGGADGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGILGKRYIELFRS 426
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ R + S L A +G
Sbjct: 427 TAAEVQQVLNR-----------------YASSPLLPTLTAPLLPIPFPLA--------AG 461
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ D C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ E
Sbjct: 462 TGRD--CVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAE 519
Query: 196 NAEKALLR-HKEKIGHRLVTLV 216
A A R HK+ + R V +V
Sbjct: 520 RALAAAQRCHKKVMKERYVEVV 541
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +DV +F +GL I G+ + + GR G A I+FVD E + AL
Sbjct: 246 ETVVRARGLPWQSSDQDVARFFKGLNIARGGVALCLNAQGRRNGEALIRFVDSEQRDLAL 305
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + F+
Sbjct: 306 QRHKHHMGVRYIEVYKATGEEFV 328
>gi|403301377|ref|XP_003941367.1| PREDICTED: G-rich sequence factor 1-like [Saimiri boliviensis
boliviensis]
Length = 291
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 148 QGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC-TGVAYIQFVDKENAEKALLRHKE 206
+GLPY C K+D+ F GL V IT DY GR TG AY+QF + E A +ALL+H+E
Sbjct: 59 RGLPYSCNKKDIVDFFAGLNTV--AITFVMDYRGRQKTGEAYVQFEEPEMANQALLKHRE 116
Query: 207 KIGHRLVTLVMS 218
+IG+R + + S
Sbjct: 117 EIGNRYIEIFPS 128
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 98/232 (42%), Gaps = 26/232 (11%)
Query: 23 FFKPIVPVNILLLTDDAGRS-SGEADVEFSSVDDAQRALQRHKSNMGDRYIELY---MEE 78
FF + V I + D GR +GEA V+F + A +AL +H+ +G+RYIE++ E
Sbjct: 73 FFAGLNTVAITFVMDYRGRQKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 132
Query: 79 G-TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAK-RSEMDWALKRQGAVLS 136
G T G+ K +F + A SE + L ++
Sbjct: 133 GRTHVCSHKGKKMASSPTAKYITEPEMVFEEHEVNEDIRSMAAFESEKEIELPQEMPEKL 192
Query: 137 GSAVD---QCCM---RLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
AVD C+ ++GLP++ +D+ F L+ P IT+ + + + TG A +
Sbjct: 193 PEAVDFGTTPCLYFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSRKATGEAEVH 250
Query: 191 FVDKENAEKALLRHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGS 242
F E+A +L+ + HR + L +S P +LD GS
Sbjct: 251 FEIHEDAVAVMLKDWSHVHHRYIELFLSSC------------PKGKLDFRGS 290
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + + +++GEA+V F +DA + + S++ RYIEL++
Sbjct: 223 NFFAPLKPVRITMEYSSSRKATGEAEVHFEIHEDAVAVMLKDWSHVHHRYIELFL 277
>gi|332227574|ref|XP_003262967.1| PREDICTED: epithelial splicing regulatory protein 2 isoform 2
[Nomascus leucogenys]
Length = 727
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 85/202 (42%), Gaps = 35/202 (17%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK+ +G RYIEL+
Sbjct: 377 FLGPECPVTGGAEGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKAMLGKRYIELFRS 436
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ R + S L A G
Sbjct: 437 TAAEVQQVLNR-----------------YASSPLLPTLTAPLLPIPFPLA--------PG 471
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ D C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ E
Sbjct: 472 TGRD--CVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAE 529
Query: 196 NAEKALLR-HKEKIGHRLVTLV 216
A A R HK+ + R V +V
Sbjct: 530 RALAAAQRCHKKVMKERYVEVV 551
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYM 76
++FFK + + L + GR +GEA + F VD QR ALQRHK +MG RYIE+Y
Sbjct: 274 ARFFKGLNVARGGVALCLNAQGRRNGEALIRF--VDSEQRDLALQRHKHHMGVRYIEVYK 331
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
G + G GT +++FL++
Sbjct: 332 ATGEEFVKIAG-GTS--------------LEVARFLSRE--------------------- 355
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFV 192
DQ +RL+GLP+ DV FL G E G+ GR TG A+ F
Sbjct: 356 ----DQVILRLRGLPFSAGPTDVLGFL-GPECPVTGGAEGLLFVRHPDGRPTGDAFALFA 410
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL RHK +G R + L S A
Sbjct: 411 CEELAQAALRRHKAMLGKRYIELFRSTA 438
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +DV +F +GL + G+ + + GR G A I+FVD E + AL
Sbjct: 256 ETVVRARGLPWQSSDQDVARFFKGLNVARGGVALCLNAQGRRNGEALIRFVDSEQRDLAL 315
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + F+
Sbjct: 316 QRHKHHMGVRYIEVYKATGEEFV 338
>gi|410983809|ref|XP_003998229.1| PREDICTED: epithelial splicing regulatory protein 2 isoform 2
[Felis catus]
Length = 726
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 90/208 (43%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYM 76
++FFK I + L + GR +GEA + F VD QR ALQRHK +MG RYIE+Y
Sbjct: 273 ARFFKGLNIARGGVALCLNAQGRRNGEALIRF--VDSEQRDLALQRHKHHMGVRYIEVYK 330
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
G + G GT +++FL++
Sbjct: 331 ATGEEFVKIAG-GTS--------------LEVARFLSRE--------------------- 354
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFV 192
DQ +RL+GLP+ DV FL G E +G+ GR TG A+ F
Sbjct: 355 ----DQVILRLRGLPFSAGPADVLGFL-GPECPVTGGADGLLFVRHPDGRPTGDAFALFA 409
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL RHK +G R + L S A
Sbjct: 410 CEELAQAALRRHKGILGKRYIELFRSTA 437
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 85/202 (42%), Gaps = 35/202 (17%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIEL+
Sbjct: 376 FLGPECPVTGGADGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGILGKRYIELFRS 435
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ R + S L A +G
Sbjct: 436 TAAEVQQVLNR-----------------YASSPLLPTLTAPLLPIPFPLA--------AG 470
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ D C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ E
Sbjct: 471 TGRD--CVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAE 528
Query: 196 NAEKALLR-HKEKIGHRLVTLV 216
A A R HK+ + R V +V
Sbjct: 529 RALAAAQRCHKKVMKERYVEVV 550
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +DV +F +GL I G+ + + GR G A I+FVD E + AL
Sbjct: 255 ETVVRARGLPWQSSDQDVARFFKGLNIARGGVALCLNAQGRRNGEALIRFVDSEQRDLAL 314
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + F+
Sbjct: 315 QRHKHHMGVRYIEVYKATGEEFV 337
>gi|395853861|ref|XP_003799417.1| PREDICTED: epithelial splicing regulatory protein 2 [Otolemur
garnettii]
Length = 715
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 86/202 (42%), Gaps = 35/202 (17%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIE++
Sbjct: 365 FLGPECPVTGGAEGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIEIFRS 424
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ R + S L A +G
Sbjct: 425 TAAEVQQVLNR-----------------YASSPLLPTLTAPLLPIPFPLA--------AG 459
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ D C+RL+GLPY ED+ FL ++I P+G+ + + GR +G A+IQ E
Sbjct: 460 TGRD--CVRLRGLPYTATIEDILSFLGEAAVDIRPHGVHMVLNQQGRPSGDAFIQMTSAE 517
Query: 196 NAEKALLR-HKEKIGHRLVTLV 216
A A R HK+ + R V +V
Sbjct: 518 RALAAAQRCHKKVMKERYVEVV 539
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYM 76
++FFK I + L + GR +GEA + F VD QR ALQRHK +MG RYIE+Y
Sbjct: 262 ARFFKGLNIARGGVALCLNAQGRRNGEALIRF--VDSEQRDLALQRHKHHMGIRYIEVYK 319
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
G + G G I +++FL++
Sbjct: 320 ATGEEFVKIAG--------------GTSIE-VARFLSRE--------------------- 343
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFV 192
DQ +RL+GLP+ DV FL G E G+ GR TG A+ F
Sbjct: 344 ----DQVILRLRGLPFSAGPPDVLGFL-GPECPVTGGAEGLLFVRHPDGRPTGDAFALFA 398
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL RHK +G R + + S A
Sbjct: 399 CEELAQAALRRHKGMLGKRYIEIFRSTA 426
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +DV +F +GL I G+ + + GR G A I+FVD E + AL
Sbjct: 244 ETVVRARGLPWQSSDQDVARFFKGLNIARGGVALCLNAQGRRNGEALIRFVDSEQRDLAL 303
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + F+
Sbjct: 304 QRHKHHMGIRYIEVYKATGEEFV 326
>gi|332227572|ref|XP_003262966.1| PREDICTED: epithelial splicing regulatory protein 2 isoform 1
[Nomascus leucogenys]
Length = 717
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 85/202 (42%), Gaps = 35/202 (17%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK+ +G RYIEL+
Sbjct: 367 FLGPECPVTGGAEGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKAMLGKRYIELFRS 426
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ R + S L A G
Sbjct: 427 TAAEVQQVLNR-----------------YASSPLLPTLTAPLLPIPFPLA--------PG 461
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ D C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ E
Sbjct: 462 TGRD--CVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAE 519
Query: 196 NAEKALLR-HKEKIGHRLVTLV 216
A A R HK+ + R V +V
Sbjct: 520 RALAAAQRCHKKVMKERYVEVV 541
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYM 76
++FFK + + L + GR +GEA + F VD QR ALQRHK +MG RYIE+Y
Sbjct: 264 ARFFKGLNVARGGVALCLNAQGRRNGEALIRF--VDSEQRDLALQRHKHHMGVRYIEVYK 321
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
G + G GT +++FL++
Sbjct: 322 ATGEEFVKIAG-GTS--------------LEVARFLSRE--------------------- 345
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFV 192
DQ +RL+GLP+ DV FL G E G+ GR TG A+ F
Sbjct: 346 ----DQVILRLRGLPFSAGPTDVLGFL-GPECPVTGGAEGLLFVRHPDGRPTGDAFALFA 400
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL RHK +G R + L S A
Sbjct: 401 CEELAQAALRRHKAMLGKRYIELFRSTA 428
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +DV +F +GL + G+ + + GR G A I+FVD E + AL
Sbjct: 246 ETVVRARGLPWQSSDQDVARFFKGLNVARGGVALCLNAQGRRNGEALIRFVDSEQRDLAL 305
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + F+
Sbjct: 306 QRHKHHMGVRYIEVYKATGEEFV 328
>gi|255071701|ref|XP_002499525.1| predicted protein [Micromonas sp. RCC299]
gi|226514787|gb|ACO60783.1| predicted protein [Micromonas sp. RCC299]
Length = 251
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 92/211 (43%), Gaps = 23/211 (10%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIEL------- 74
+FF+ + PV++L++ D GR++GEA V F++ ALQ+++ MG RYIE+
Sbjct: 37 EFFQGLDPVDVLIVRRD-GRATGEAYVLFANPMQMDFALQKNRGPMGRRYIEVFRSKKQD 95
Query: 75 -YMEEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGA 133
Y + E GT +GG G G + A
Sbjct: 96 YYYAVAHAVNEPTPHGTDFYGGDNGLASGAGHLAHVAGVGGPAPPVPHGAP--------A 147
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEG------LEIVPNGITIPHDYAGRCTGVA 187
+ ++++GLP+ K+D+ F + + + I I GR +G+A
Sbjct: 148 AVRPPQEHTGVLKMRGLPFSATKDDIITFYDDPALSVTAPLTHDSIHIVTSLDGRPSGMA 207
Query: 188 YIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+++F E+A+ A+ R + +G R V L S
Sbjct: 208 FVEFASAEDAKAAMSRDRCTMGSRYVELFPS 238
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 26 PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEA 85
P+ +I ++T GR SG A VEF+S +DA+ A+ R + MG RY+EL+ +S +EA
Sbjct: 187 PLTHDSIHIVTSLDGRPSGMAFVEFASAEDAKAAMSRDRCTMGSRYVELFP---SSREEA 243
Query: 86 NGRGTGG 92
T G
Sbjct: 244 TRAATSG 250
Score = 43.9 bits (102), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP+ + D+ +F +GL+ V + + + D GR TG AY+ F + + AL +
Sbjct: 20 VVRLRGLPFNAGEFDILEFFQGLDPV-DVLIVRRD--GRATGEAYVLFANPMQMDFALQK 76
Query: 204 HKEKIGHRLVTLVMSGAQWF 223
++ +G R + + S Q +
Sbjct: 77 NRGPMGRRYIEVFRSKKQDY 96
>gi|358342654|dbj|GAA27695.2| heterogeneous nuclear ribonucleoprotein F/H [Clonorchis sinensis]
Length = 295
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 124 MDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC 183
M+W L R+ +RL GLP+ K ++ F EG EIV +GI + D+ GR
Sbjct: 1 MNWYLNRRPK-------PDGTLRLFGLPFSVTKAQIQAFFEGFEIVKDGIGLLTDHHGRP 53
Query: 184 TGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
TG A++QFV E A A +HK I R V + S
Sbjct: 54 TGEAFVQFVSPEVARLAAGKHKHLIDGRYVEISFS 88
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 39/53 (73%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
FF+PI P+ + + T G+ +G ADV F++V+D + A++RHK+ MG RYIEL+
Sbjct: 237 FFRPIQPLTVTMRTHKNGKPNGMADVYFATVEDTKEAMKRHKAPMGFRYIELF 289
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 136 SGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+G++ Q +R++GLP+ D+ F ++ P +T+ G+ G+A + F E
Sbjct: 211 TGASRTQRHIRMRGLPFAATVNDILDFFRPIQ--PLTVTMRTHKNGKPNGMADVYFATVE 268
Query: 196 NAEKALLRHKEKIGHRLVTLVMS 218
+ ++A+ RHK +G R + L S
Sbjct: 269 DTKEAMKRHKAPMGFRYIELFSS 291
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEA 85
IV I LLTD GR +GEA V+F S + A+ A +HK + RY+E+ ++ +A
Sbjct: 38 IVKDGIGLLTDHHGRPTGEAFVQFVSPEVARLAAGKHKHLIDGRYVEISFSTLKAANQA 96
>gi|359063387|ref|XP_002685850.2| PREDICTED: epithelial splicing regulatory protein 1 [Bos taurus]
Length = 1157
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + G+ +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGQRNGEALVRFVSEEHRDLALQRHKHHMGSRYIEVYKAT 301
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 302 GEDFLKIAG-GTSNE--------------VAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ ++V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATADEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQV------ 412
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 413 ----------------LNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNIRD--CIRLRGLP 453
Query: 152 YECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YVATTEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM 513
Query: 209 GHRLVTLVMSGAQ 221
R V + A+
Sbjct: 514 KDRYVEVFQCSAE 526
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + G+ G A ++FV +E+ + A
Sbjct: 223 DNTVVRARGLPWQSLDQDIARFFKGLNIAKGGAALCLNAQGQRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGSRYIEVYKATGEDFL 306
>gi|260819360|ref|XP_002605005.1| hypothetical protein BRAFLDRAFT_285603 [Branchiostoma floridae]
gi|229290334|gb|EEN61015.1| hypothetical protein BRAFLDRAFT_285603 [Branchiostoma floridae]
Length = 645
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R++GLP++ +D+ +F GL I G+ + + GR G A ++F KE+ + A
Sbjct: 212 DDTILRVRGLPWQSSDQDIARFFRGLNITKGGVAVCLNPQGRRNGEALVRFASKEHRDLA 271
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
LLRHK IG R + + + + FL
Sbjct: 272 LLRHKHHIGQRYIEVYKATGEDFL 295
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 22 QFFKPIVPV-----NILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF PV IL + GRS+G+A V F + AQ AL +HK ++G RYIEL+
Sbjct: 334 NFFGQSCPVAGGEKGILFVRYANGRSTGDAFVLFETEAYAQLALAKHKESLGKRYIELFR 393
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
++ R + +TP + + Q A+
Sbjct: 394 STAAEVQQVWNR-YQQCPLIHTTPTMIPML-----------------------PQQAITC 429
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDK 194
GS D C+R++GLPY+ +DV FL + + +GI + + +G+ +G +IQ
Sbjct: 430 GSIRD--CVRMRGLPYQATHDDVLAFLGEYAVYVRDHGIHMVLNSSGKPSGDCFIQMYSP 487
Query: 195 ENAEKALLR-HKEKIGHRLVTL 215
E A +A + H++ +G R + +
Sbjct: 488 EAARQAAEKCHRQYMGDRYIEV 509
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 91/228 (39%), Gaps = 57/228 (25%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FF+ I + + + GR +GEA V F+S + AL RHK ++G RYIE+Y
Sbjct: 231 ARFFRGLNITKGGVAVCLNPQGRRNGEALVRFASKEHRDLALLRHKHHIGQRYIEVYKAT 290
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G FL A + A L S
Sbjct: 291 G-----------------------------EDFLKVAGGNANEAT---------AFLRDS 312
Query: 139 AVDQCCMRLQGLPYECKKEDVEKF------LEGLEIVPNGITIPHDYAGRCTGVAYIQFV 192
A + +R++GLPY D+ F + G E GI GR TG A++ F
Sbjct: 313 AA-EVIVRMRGLPYTATAADILNFFGQSCPVAGGE---KGILFVRYANGRSTGDAFVLFE 368
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGAQ-----W--FLSPPLTNETP 233
+ A+ AL +HKE +G R + L S A W + PL + TP
Sbjct: 369 TEAYAQLALAKHKESLGKRYIELFRSTAAEVQQVWNRYQQCPLIHTTP 416
>gi|358420736|ref|XP_001789374.2| PREDICTED: epithelial splicing regulatory protein 1 [Bos taurus]
gi|296490145|tpg|DAA32258.1| TPA: fusilli-like [Bos taurus]
Length = 767
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + G+ +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGQRNGEALVRFVSEEHRDLALQRHKHHMGSRYIEVYKAT 301
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 302 GEDFLKIAG-GTSNE--------------VAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ ++V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATADEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 106/256 (41%), Gaps = 47/256 (18%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++ R +
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSS 418
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
TP + + QF+ R C+RL+GLP
Sbjct: 419 APLIPLPTPPIIPVL-PQQFVPPTNIRD------------------------CIRLRGLP 453
Query: 152 YECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YVATTEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTM 513
Query: 209 GHRLVTLVMSGAQWF-------------LSPP---LTNETPISRLDLTGSPVRSTICVLC 252
R V + A+ LSPP L +P S + V T +
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 573
Query: 253 HP---LTPRSVRPRSV 265
P L PR+++P +
Sbjct: 574 QPSVLLNPRALQPSTA 589
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + G+ G A ++FV +E+ + A
Sbjct: 223 DNTVVRARGLPWQSLDQDIARFFKGLNIAKGGAALCLNAQGQRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGSRYIEVYKATGEDFL 306
>gi|297746312|emb|CBI16368.3| unnamed protein product [Vitis vinifera]
Length = 235
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 86/199 (43%), Gaps = 48/199 (24%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
++FF + V++L + + GR +GEA + ALQR++ NMG RY+E++
Sbjct: 72 VAEFFHSLDIVDVLFVHKN-GRFTGEAFCVLGYPLQVEFALQRNRQNMGRRYVEVF---- 126
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA 139
R+KR E A+ + + G
Sbjct: 127 --------------------------------------RSKRQEYYKAIANEVSDTRGG- 147
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
+RL+GLP+ KED+ F + + + I + + GR TG A+++F + E+++
Sbjct: 148 ----VLRLRGLPFSASKEDIMDFFKDFVLSEDSIHMTVNSEGRPTGEAFVEFTNAEDSKA 203
Query: 200 ALLRHKEKIGHRLVTLVMS 218
A+ + + +G R + L S
Sbjct: 204 AMAKDRMTLGSRYIELFPS 222
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 7/107 (6%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP++C + DV +F L+IV + H GR TG A+ E AL R
Sbjct: 57 VVRLRGLPFDCSEADVAEFFHSLDIV--DVLFVHK-NGRFTGEAFCVLGYPLQVEFALQR 113
Query: 204 HKEKIGHRLVTLVMSGAQWFLSPPLTNETPISR---LDLTGSPVRST 247
+++ +G R V + S Q + + NE +R L L G P ++
Sbjct: 114 NRQNMGRRYVEVFRSKRQEYYK-AIANEVSDTRGGVLRLRGLPFSAS 159
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 22 QFFKPIV--PVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
FFK V +I + + GR +GEA VEF++ +D++ A+ + + +G RYIEL+
Sbjct: 165 DFFKDFVLSEDSIHMTVNSEGRPTGEAFVEFTNAEDSKAAMAKDRMTLGSRYIELFPSSL 224
Query: 80 TSSKEANGRG 89
EA RG
Sbjct: 225 EELDEAVARG 234
>gi|72092573|ref|XP_792820.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 2
[Strongylocentrotus purpuratus]
Length = 752
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 17/185 (9%)
Query: 23 FFKPIVPV-----NILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF P +PV IL + G+ +G+A V F+S D +AL +H+ +G+RYIE++
Sbjct: 341 FFGPEIPVAGGEEGILFVKQKNGKMTGDAFVLFASEDAVSKALSKHREYLGNRYIEIFRS 400
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGI---FCISQFLAKWMRRAKRSEMDWALKRQGAV 134
++ R V+S P I + + +
Sbjct: 401 TTAEVQQVLSR-------VQSEPIMADIPQQQVMPPMIPIPIHAMPPHHPHQPPPPPHPH 453
Query: 135 LSGSAVDQCCMRLQGLPYECKKEDVEKFL-EGLEIV-PNGITIPHDYAGRCTGVAYIQFV 192
+ V + C+R++GLPY ED+ FL E + + P+G+ + + G+ G A+IQ
Sbjct: 454 FITAGVVRDCIRMRGLPYNASIEDIMLFLGEAAQFIRPHGVHMVLNLQGKPNGEAFIQMT 513
Query: 193 DKENA 197
E A
Sbjct: 514 SAERA 518
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 83/191 (43%), Gaps = 44/191 (23%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ L + GR +GE V F S + ALQRHK N+G RY+E++ G
Sbjct: 250 VALCLNTHGRRNGEVMVHFESSEQRDMALQRHKHNLGKRYVEVFKATG------------ 297
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+F+ +K + + A + +G ++ +R++GLP
Sbjct: 298 -----------------DEFIRVAAGTSKEATLFLA-RDEGHII---------VRMRGLP 330
Query: 152 YECKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEK 207
+ ++DV F G EI GI G+ TG A++ F ++ KAL +H+E
Sbjct: 331 FTASEKDVVDFF-GPEIPVAGGEEGILFVKQKNGKMTGDAFVLFASEDAVSKALSKHREY 389
Query: 208 IGHRLVTLVMS 218
+G+R + + S
Sbjct: 390 LGNRYIEIFRS 400
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%)
Query: 136 SGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ S D ++ +GLP++ DV +F +GL I G+ + + GR G + F E
Sbjct: 213 TDSIPDDTAVKARGLPWQASDRDVFRFFKGLNIARGGVALCLNTHGRRNGEVMVHFESSE 272
Query: 196 NAEKALLRHKEKIGHRLVTLVMSGAQWFL 224
+ AL RHK +G R V + + F+
Sbjct: 273 QRDMALQRHKHNLGKRYVEVFKATGDEFI 301
>gi|77553600|gb|ABA96396.1| heterogeneous nuclear ribonucleoprotein, putative, expressed [Oryza
sativa Japonica Group]
Length = 235
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 28/199 (14%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY--MEEG 79
+FF + V+ LL+ + GR +GEA V F S A+ AL R++ NMG RY+E++ ++
Sbjct: 51 KFFVGLDIVDCLLVHKN-GRFTGEAFVVFPSAMQAEFALHRNRQNMGRRYVEVFRCKKQE 109
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA 139
S A GGF F +++ R + + + +
Sbjct: 110 YYSAIAAEVNQGGF-----------------FDSEY-RHSPPPPRPKKPAEDKSSMEYTE 151
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
V ++L+GLPY ED+ KF E+ + I + G+ TG AY++F E +
Sbjct: 152 V----LKLRGLPYSATTEDIIKFFVEYELTDENVHIVYRPDGKATGEAYVEFPTAEVVKT 207
Query: 200 ALLRHKEKIG---HRLVTL 215
A+ + K IG H + T+
Sbjct: 208 AMCKDKMTIGTSMHHVATV 226
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RL+GLP++C D+ KF GL+IV + H GR TG A++ F AE AL R+
Sbjct: 35 VRLRGLPFDCDDLDICKFFVGLDIV--DCLLVHK-NGRFTGEAFVVFPSAMQAEFALHRN 91
Query: 205 KEKIGHRLVTLVMSGAQWFLS 225
++ +G R V + Q + S
Sbjct: 92 RQNMGRRYVEVFRCKKQEYYS 112
>gi|402908823|ref|XP_003917134.1| PREDICTED: epithelial splicing regulatory protein 2 isoform 2
[Papio anubis]
Length = 725
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 86/203 (42%), Gaps = 37/203 (18%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIEL+
Sbjct: 375 FLGPECPVTGGAEGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRS 434
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGI-FCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
++ R G T + I F ++
Sbjct: 435 TAAEVQQVLNRYASGPLLPTLTAPLLPIPFPLA--------------------------P 468
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDK 194
G+ D C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ
Sbjct: 469 GTGRD--CVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSA 526
Query: 195 ENAEKALLR-HKEKIGHRLVTLV 216
E A R HK+ + R V +V
Sbjct: 527 ERALATAQRCHKKVMKERYVEVV 549
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYM 76
++FFK + + L + GR +GEA + F VD QR ALQRHK +MG RYIE+Y
Sbjct: 272 ARFFKGLNVARGGVALCLNAQGRRNGEALIRF--VDSEQRDLALQRHKHHMGVRYIEVYK 329
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
G + G GT +++FL++
Sbjct: 330 ATGEEFVKIAG-GTS--------------LEVARFLSRE--------------------- 353
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFV 192
DQ +RL+GLP+ DV FL G E G+ GR TG A+ F
Sbjct: 354 ----DQVILRLRGLPFSAGPMDVLGFL-GPECPVTGGAEGLLFVRHPDGRPTGDAFALFA 408
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL RHK +G R + L S A
Sbjct: 409 CEELAQAALRRHKGMLGKRYIELFRSTA 436
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +DV +F +GL + G+ + + GR G A I+FVD E + AL
Sbjct: 254 ETVVRARGLPWQSSDQDVARFFKGLNVARGGVALCLNAQGRRNGEALIRFVDSEQRDLAL 313
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + F+
Sbjct: 314 QRHKHHMGVRYIEVYKATGEEFV 336
>gi|390333349|ref|XP_003723691.1| PREDICTED: epithelial splicing regulatory protein 1 isoform 1
[Strongylocentrotus purpuratus]
Length = 720
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 17/185 (9%)
Query: 23 FFKPIVPV-----NILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF P +PV IL + G+ +G+A V F+S D +AL +H+ +G+RYIE++
Sbjct: 341 FFGPEIPVAGGEEGILFVKQKNGKMTGDAFVLFASEDAVSKALSKHREYLGNRYIEIFRS 400
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGI---FCISQFLAKWMRRAKRSEMDWALKRQGAV 134
++ R V+S P I + + +
Sbjct: 401 TTAEVQQVLSR-------VQSEPIMADIPQQQVMPPMIPIPIHAMPPHHPHQPPPPPHPH 453
Query: 135 LSGSAVDQCCMRLQGLPYECKKEDVEKFL-EGLEIV-PNGITIPHDYAGRCTGVAYIQFV 192
+ V + C+R++GLPY ED+ FL E + + P+G+ + + G+ G A+IQ
Sbjct: 454 FITAGVVRDCIRMRGLPYNASIEDIMLFLGEAAQFIRPHGVHMVLNLQGKPNGEAFIQMT 513
Query: 193 DKENA 197
E A
Sbjct: 514 SAERA 518
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 46/203 (22%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
+FFK I + L + GR +GE V F S + ALQRHK N+G RY+E++ G
Sbjct: 238 RFFKGLNIARGGVALCLNTHGRRNGEVMVHFESSEQRDMALQRHKHNLGKRYVEVFKATG 297
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA 139
+F+ +K + + A + +G ++
Sbjct: 298 -----------------------------DEFIRVAAGTSKEATLFLA-RDEGHII---- 323
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFVDKE 195
+R++GLP+ ++DV F G EI GI G+ TG A++ F ++
Sbjct: 324 -----VRMRGLPFTASEKDVVDFF-GPEIPVAGGEEGILFVKQKNGKMTGDAFVLFASED 377
Query: 196 NAEKALLRHKEKIGHRLVTLVMS 218
KAL +H+E +G+R + + S
Sbjct: 378 AVSKALSKHREYLGNRYIEIFRS 400
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%)
Query: 136 SGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ S D ++ +GLP++ DV +F +GL I G+ + + GR G + F E
Sbjct: 213 TDSIPDDTAVKARGLPWQASDRDVFRFFKGLNIARGGVALCLNTHGRRNGEVMVHFESSE 272
Query: 196 NAEKALLRHKEKIGHRLVTLVMSGAQWFL 224
+ AL RHK +G R V + + F+
Sbjct: 273 QRDMALQRHKHNLGKRYVEVFKATGDEFI 301
>gi|355756893|gb|EHH60501.1| hypothetical protein EGM_11873, partial [Macaca fascicularis]
Length = 635
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 86/203 (42%), Gaps = 37/203 (18%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIEL+
Sbjct: 285 FLGPECPVTGGAEGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRS 344
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGI-FCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
++ R G T + I F ++
Sbjct: 345 TAAEVQQVLNRYASGPLLPTLTAPLLPIPFPLA--------------------------P 378
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDK 194
G+ D C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ
Sbjct: 379 GTGRD--CVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSA 436
Query: 195 ENAEKALLR-HKEKIGHRLVTLV 216
E A R HK+ + R V +V
Sbjct: 437 ERALATAQRCHKKVMKERYVEVV 459
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 83/196 (42%), Gaps = 49/196 (25%)
Query: 31 NILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYMEEGTSSKEANGR 88
+ L + GR +GEA + F VD QR ALQRHK +MG RYIE+Y G + G
Sbjct: 194 GVALCLNAQGRRNGEALIRF--VDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAG- 250
Query: 89 GTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQ 148
GT +++FL++ DQ +RL+
Sbjct: 251 GTS--------------LEVARFLSRE-------------------------DQVILRLR 271
Query: 149 GLPYECKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
GLP+ DV FL G E G+ GR TG A+ F +E A+ AL RH
Sbjct: 272 GLPFSAGPMDVLGFL-GPECPVTGGAEGLLFVRHPDGRPTGDAFALFACEELAQAALRRH 330
Query: 205 KEKIGHRLVTLVMSGA 220
K +G R + L S A
Sbjct: 331 KGMLGKRYIELFRSTA 346
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +DV +F +GL + G+ + + GR G A I+FVD E + AL
Sbjct: 164 ETVVRARGLPWQSSDQDVARFFKGLNVARGGVALCLNAQGRRNGEALIRFVDSEQRDLAL 223
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + F+
Sbjct: 224 QRHKHHMGVRYIEVYKATGEEFV 246
>gi|449280564|gb|EMC87832.1| G-rich sequence factor 1, partial [Columba livia]
Length = 331
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 88/215 (40%), Gaps = 54/215 (25%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + GR G+A +E S D QRAL++H MG RY++
Sbjct: 40 IHFLLNRDGRRRGDALIELESKADVQRALEKHLRYMGPRYVK------------------ 81
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+F + + + R+ R E A++ + L+GLP
Sbjct: 82 -------------VFEVHDSDVESLLRSLRDE-------------SQAINDGVVMLRGLP 115
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAG-RCTGVAYIQFVDKENAEKALLRHKEKIGH 210
+ ++D+ F GL+I I Y G R TG A++QF + A KAL RH+E +G+
Sbjct: 116 FSSTEDDIADFFSGLKIT----DIAFVYRGERRTGEAFVQFAAPDMAAKALSRHREYMGN 171
Query: 211 RLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVR 245
R + + +S + P R LT VR
Sbjct: 172 RYIEVYVSRKHQ-----MQRHVPYHRQLLTYPKVR 201
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAE 198
D +R QG P+ C +EDV F + I NGI + GR G A I+ K + +
Sbjct: 6 DVFLIRAQGFPFSCTEEDVLTFFDSCRIRNGENGIHFLLNRDGRRRGDALIELESKADVQ 65
Query: 199 KALLRHKEKIGHRLVTL 215
+AL +H +G R V +
Sbjct: 66 RALEKHLRYMGPRYVKV 82
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ P I++ + G ++GEADV F S +DA A+ + S + IEL++
Sbjct: 267 NFFAPLKPTRIMVEYNCHGDATGEADVHFESREDAVAAMAKEGSRLQCSAIELFL 321
>gi|297284292|ref|XP_002802581.1| PREDICTED: epithelial splicing regulatory protein 2-like isoform 2
[Macaca mulatta]
Length = 725
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 86/203 (42%), Gaps = 37/203 (18%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIEL+
Sbjct: 375 FLGPECPVTGGAEGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRS 434
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGI-FCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
++ R G T + I F ++
Sbjct: 435 TAAEVQQVLNRYASGPLLPTLTAPLLPIPFPLA--------------------------P 468
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDK 194
G+ D C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ
Sbjct: 469 GTGRD--CVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSA 526
Query: 195 ENAEKALLR-HKEKIGHRLVTLV 216
E A R HK+ + R V +V
Sbjct: 527 ERALATAQRCHKKVMKERYVEVV 549
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYM 76
++FFK + + L + GR +GEA + F VD QR ALQRHK +MG RYIE+Y
Sbjct: 272 ARFFKGLNVARGGVALCLNAQGRRNGEALIRF--VDSEQRDLALQRHKHHMGVRYIEVYK 329
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
G + G GT +++FL++
Sbjct: 330 ATGEEFVKIAG-GTS--------------LEVARFLSRE--------------------- 353
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFV 192
DQ +RL+GLP+ DV FL G E G+ GR TG A+ F
Sbjct: 354 ----DQVILRLRGLPFSAGPMDVLGFL-GPECPVTGGAEGLLFVRHPDGRPTGDAFALFA 408
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL RHK +G R + L S A
Sbjct: 409 CEELAQAALRRHKGMLGKRYIELFRSTA 436
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +DV +F +GL + G+ + + GR G A I+FVD E + AL
Sbjct: 254 ETVVRARGLPWQSSDQDVARFFKGLNVARGGVALCLNAQGRRNGEALIRFVDSEQRDLAL 313
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + F+
Sbjct: 314 QRHKHHMGVRYIEVYKATGEEFV 336
>gi|312081197|ref|XP_003142925.1| RNA binding protein [Loa loa]
gi|307761913|gb|EFO21147.1| RNA binding protein [Loa loa]
Length = 547
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 49/182 (26%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR+SGE VE A+ A + K M +RYIE
Sbjct: 97 GRASGECYVELVDKAAAEEAKRFDKQEMNNRYIE-------------------------- 130
Query: 100 PYGVGIFCISQFLAKWMRR---AKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKK 156
+F +++ WM R ++ + D +RL+G+P+
Sbjct: 131 -----VFNVTESEVVWMTRHNVIRKGDQDTPY-------------NFVVRLRGIPFSATN 172
Query: 157 EDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLV 216
+DV++F GLE+ + I + GR +G A+++F K++AE AL R++ +G R V +
Sbjct: 173 DDVKEFFTGLEVA--DVVIDKELGGRPSGEAFVRFASKQHAEMALERNRNNMGSRYVEVF 230
Query: 217 MS 218
S
Sbjct: 231 RS 232
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RL+GLP+ K++DV FLEGLE+ +T GR +G Y++ VDK AE+A
Sbjct: 63 IRLRGLPFSAKEDDVRAFLEGLEV--RSVTFTLTSMGRASGECYVELVDKAAAEEAKRFD 120
Query: 205 KEKIGHRLVTL 215
K+++ +R + +
Sbjct: 121 KQEMNNRYIEV 131
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
+FF + ++++ + GR SGEA V F+S A+ AL+R+++NMG RY+E++ G
Sbjct: 177 EFFTGLEVADVVIDKELGGRPSGEAFVRFASKQHAEMALERNRNNMGSRYVEVFRSSG 234
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 11 LIHITYCLLCSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDR 70
L + L FFKP+ V I L ++ R SG+A V F ++ +A+ A+ R+K +G+R
Sbjct: 337 LPYSANALDIEDFFKPLNCVEIQLGFNEDRRPSGDACVIFGTLAEARDAMSRNKQCIGNR 396
Query: 71 YIELY 75
YIEL+
Sbjct: 397 YIELF 401
>gi|449265752|gb|EMC76898.1| RNA-binding protein 12, partial [Columba livia]
Length = 853
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 90/187 (48%), Gaps = 18/187 (9%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ +L D GR++G V+F S D AL+R++ M RY+E+ + + E G
Sbjct: 317 VHMLKDHVGRNNGNGLVKFFSPQDTFEALKRNRMLMIQRYVEV-----SPATERQWVAAG 371
Query: 92 GFGGVKST--PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQC-CMRLQ 148
G K T P G Q + RS+ KR S S +Q C+ L+
Sbjct: 372 GHITFKQTMGPSG-------QSHPPPPQPHSRSKSPSGQKRS---RSRSPHEQGFCVYLK 421
Query: 149 GLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKI 208
GLP+E + + V F + L+IV + I I + G+ G +++F ++ + + AL HK+ I
Sbjct: 422 GLPFESENKHVIDFFKKLDIVEDSIYIAYGPNGKAIGEGFVEFRNEADYKAALCHHKQYI 481
Query: 209 GHRLVTL 215
G+R + +
Sbjct: 482 GNRFIQV 488
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 88/195 (45%), Gaps = 29/195 (14%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G++ GE VEF + D + AL HK +G+R+I+++
Sbjct: 435 FFKKLDIVEDSIYIAYGPNGKAIGEGFVEFRNEADYKAALCHHKQYIGNRFIQVH----P 490
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+A + + K ++ + + + +G +
Sbjct: 491 ITKKA-------------------MLEKIDMIRKRLQNFSYDQREILMNAEGE----PGL 527
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +PY K ++ +FLEGL + N + I D G+ G A +QF +++A KA
Sbjct: 528 PKLCAHISNIPYNITKMEILQFLEGLAVEENSVQILVDNNGQGLGQALVQFKAEDDARKA 587
Query: 201 LLRHKEKIGHRLVTL 215
H++K+ R V L
Sbjct: 588 ERLHRKKLNGRDVVL 602
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++
Sbjct: 3 VVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMM 58
Query: 203 RHKEKIGHRLVTLVMS 218
R I VTL++S
Sbjct: 59 RTGGTIKGSKVTLLLS 74
>gi|402908821|ref|XP_003917133.1| PREDICTED: epithelial splicing regulatory protein 2 isoform 1
[Papio anubis]
Length = 715
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 86/203 (42%), Gaps = 37/203 (18%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIEL+
Sbjct: 365 FLGPECPVTGGAEGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRS 424
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGI-FCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
++ R G T + I F ++
Sbjct: 425 TAAEVQQVLNRYASGPLLPTLTAPLLPIPFPLA--------------------------P 458
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDK 194
G+ D C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ
Sbjct: 459 GTGRD--CVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSA 516
Query: 195 ENAEKALLR-HKEKIGHRLVTLV 216
E A R HK+ + R V +V
Sbjct: 517 ERALATAQRCHKKVMKERYVEVV 539
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYM 76
++FFK + + L + GR +GEA + F VD QR ALQRHK +MG RYIE+Y
Sbjct: 262 ARFFKGLNVARGGVALCLNAQGRRNGEALIRF--VDSEQRDLALQRHKHHMGVRYIEVYK 319
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
G + G GT +++FL++
Sbjct: 320 ATGEEFVKIAG-GTS--------------LEVARFLSRE--------------------- 343
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFV 192
DQ +RL+GLP+ DV FL G E G+ GR TG A+ F
Sbjct: 344 ----DQVILRLRGLPFSAGPMDVLGFL-GPECPVTGGAEGLLFVRHPDGRPTGDAFALFA 398
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL RHK +G R + L S A
Sbjct: 399 CEELAQAALRRHKGMLGKRYIELFRSTA 426
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +DV +F +GL + G+ + + GR G A I+FVD E + AL
Sbjct: 244 ETVVRARGLPWQSSDQDVARFFKGLNVARGGVALCLNAQGRRNGEALIRFVDSEQRDLAL 303
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + F+
Sbjct: 304 QRHKHHMGVRYIEVYKATGEEFV 326
>gi|355710319|gb|EHH31783.1| hypothetical protein EGK_12921, partial [Macaca mulatta]
Length = 688
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 86/203 (42%), Gaps = 37/203 (18%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIEL+
Sbjct: 338 FLGPECPVTGGAEGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRS 397
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGI-FCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
++ R G T + I F ++
Sbjct: 398 TAAEVQQVLNRYASGPLLPTLTAPLLPIPFPLA--------------------------P 431
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDK 194
G+ D C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ
Sbjct: 432 GTGRD--CVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSA 489
Query: 195 ENAEKALLR-HKEKIGHRLVTLV 216
E A R HK+ + R V +V
Sbjct: 490 ERALATAQRCHKKVMKERYVEVV 512
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYM 76
++FFK + + L + GR +GEA + F VD QR ALQRHK +MG RYIE+Y
Sbjct: 235 ARFFKGLNVARGGVALCLNAQGRRNGEALIRF--VDSEQRDLALQRHKHHMGVRYIEVYK 292
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
G + G GT +++FL++
Sbjct: 293 ATGEEFVKIAG-GTS--------------LEVARFLSRE--------------------- 316
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFV 192
DQ +RL+GLP+ DV FL G E G+ GR TG A+ F
Sbjct: 317 ----DQVILRLRGLPFSAGPMDVLGFL-GPECPVTGGAEGLLFVRHPDGRPTGDAFALFA 371
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL RHK +G R + L S A
Sbjct: 372 CEELAQAALRRHKGMLGKRYIELFRSTA 399
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +DV +F +GL + G+ + + GR G A I+FVD E + AL
Sbjct: 217 ETVVRARGLPWQSSDQDVARFFKGLNVARGGVALCLNAQGRRNGEALIRFVDSEQRDLAL 276
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + F+
Sbjct: 277 QRHKHHMGVRYIEVYKATGEEFV 299
>gi|109128999|ref|XP_001098015.1| PREDICTED: epithelial splicing regulatory protein 2-like isoform 1
[Macaca mulatta]
Length = 715
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 86/203 (42%), Gaps = 37/203 (18%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIEL+
Sbjct: 365 FLGPECPVTGGAEGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRS 424
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGI-FCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
++ R G T + I F ++
Sbjct: 425 TAAEVQQVLNRYASGPLLPTLTAPLLPIPFPLA--------------------------P 458
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDK 194
G+ D C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ
Sbjct: 459 GTGRD--CVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSA 516
Query: 195 ENAEKALLR-HKEKIGHRLVTLV 216
E A R HK+ + R V +V
Sbjct: 517 ERALATAQRCHKKVMKERYVEVV 539
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYM 76
++FFK + + L + GR +GEA + F VD QR ALQRHK +MG RYIE+Y
Sbjct: 262 ARFFKGLNVARGGVALCLNAQGRRNGEALIRF--VDSEQRDLALQRHKHHMGVRYIEVYK 319
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
G + G GT +++FL++
Sbjct: 320 ATGEEFVKIAG-GTS--------------LEVARFLSRE--------------------- 343
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFV 192
DQ +RL+GLP+ DV FL G E G+ GR TG A+ F
Sbjct: 344 ----DQVILRLRGLPFSAGPMDVLGFL-GPECPVTGGAEGLLFVRHPDGRPTGDAFALFA 398
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL RHK +G R + L S A
Sbjct: 399 CEELAQAALRRHKGMLGKRYIELFRSTA 426
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +DV +F +GL + G+ + + GR G A I+FVD E + AL
Sbjct: 244 ETVVRARGLPWQSSDQDVARFFKGLNVARGGVALCLNAQGRRNGEALIRFVDSEQRDLAL 303
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + F+
Sbjct: 304 QRHKHHMGVRYIEVYKATGEEFV 326
>gi|449486103|ref|XP_004175453.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 12 [Taeniopygia
guttata]
Length = 1411
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 97/208 (46%), Gaps = 23/208 (11%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+ +L D GR++G V+F S D AL+R++ M RY+E+ + + E G
Sbjct: 332 VHMLKDHVGRNNGNGLVKFFSPQDTFEALKRNRMLMIQRYVEV-----SPATERQWVAAG 386
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
G K T +G + ++ R+K + + G C+ L+GLP
Sbjct: 387 GHITFKQT---MGPSGQAHPPSQAHPRSKSPTGQKRSRSRSPHEHG-----FCVYLKGLP 438
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+E + + V F + L+IV + I I + G+ G +++F ++ + + AL HK+ IG+R
Sbjct: 439 FESENKHVIDFFKKLDIVEDSIYIAYGPNGKAIGEGFVEFRNEADYKAALCHHKQYIGNR 498
Query: 212 LVTLVMSGAQWFLSPPLTNETPISRLDL 239
+ + P+T + + ++D+
Sbjct: 499 FIQVH----------PITKKAMLEKIDM 516
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 29/195 (14%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G++ GE VEF + D + AL HK +G+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKAIGEGFVEFRNEADYKAALCHHKQYIGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+A + + K ++ + + + +G S +
Sbjct: 505 ITKKA-------------------MLEKIDMIRKRLQNFSYDQREILMNAEGE----SGL 541
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +PY K ++ +FLEGL + N + I D G+ G A +QF +++A KA
Sbjct: 542 PKLCAHISNIPYNITKIEILQFLEGLAVEENSVQILVDNNGQGLGQALVQFKAEDDAHKA 601
Query: 201 LLRHKEKIGHRLVTL 215
H++K+ R V L
Sbjct: 602 ERLHRKKLNGRDVNL 616
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++
Sbjct: 3 VVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMM 58
Query: 203 RHKEKIGHRLVTLVMS 218
R I VTL++S
Sbjct: 59 RTGGTIKGSKVTLLLS 74
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 803 TVIKVQNMPFTVSVDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEAMAAVV 862
Query: 203 RHKEK-IGHRLVTLVMS 218
++ IG R V L+ +
Sbjct: 863 DLNDRPIGSRKVKLMAA 879
>gi|395510177|ref|XP_003759357.1| PREDICTED: epithelial splicing regulatory protein 2, partial
[Sarcophilus harrisii]
Length = 470
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 94/234 (40%), Gaps = 72/234 (30%)
Query: 31 NILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYMEEGTSSKEANGR 88
+ L + GR +GEA V F VD QR AL+RHK +MG RYIE+Y G + G
Sbjct: 3 GVALCLNAQGRRNGEALVRF--VDSEQRDLALERHKHHMGARYIEVYKASGEEFLKIAG- 59
Query: 89 GTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQ 148
GT ++QFL++ DQ +R++
Sbjct: 60 GTS--------------HEVAQFLSRE-------------------------DQVIIRMR 80
Query: 149 GLPYECKKEDVEKFL----------EGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKEN 196
GLP+ DV FL EGL V P+ GR TG A+ F +E
Sbjct: 81 GLPFTATPADVLAFLGPECPVTGGHEGLLFVRYPD---------GRPTGDAFALFACEEL 131
Query: 197 AEKALLRHKEKIGHRLVTLVMSGA-------QWFLSPPLTNETPISRLDLTGSP 243
A+ AL +HK +G R + L S A + S PL P + + +P
Sbjct: 132 AQSALRKHKGILGKRYIELFRSTAAEVQQVLNRYTSSPLIPTLPAPLIPVLPAP 185
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 89/199 (44%), Gaps = 32/199 (16%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL++HK +G RYIEL+
Sbjct: 94 FLGPECPVTGGHEGLLFVRYPDGRPTGDAFALFACEELAQSALRKHKGILGKRYIELFRS 153
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ R T S+P I A + + L+G
Sbjct: 154 TAAEVQQVLNRYT-------SSP------LIPTLPAPLI----------PVLPAPFPLAG 190
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ V C +RL+GLPY +D+ FL + +I P+G+ + + GR +G A+IQ +
Sbjct: 191 AGVRDC-VRLRGLPYTASIDDILGFLGEVAGDIRPHGVHMVLNQQGRPSGDAFIQMKSAD 249
Query: 196 NAEKALLR-HKEKIGHRLV 213
A A R HK+ + R V
Sbjct: 250 RALVAAQRCHKKMMKERYV 268
Score = 43.9 bits (102), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL-R 203
+R+QGLPY +D+ F +G ++ + + + H ++GR G A + F + A +A+
Sbjct: 397 VRMQGLPYTAGVKDILSFFQGYQLPADSVLVLHSFSGRPRGDALVTFPSLDAARRAVAEE 456
Query: 204 HKEKIGHRLVTLVM 217
H +G + V L +
Sbjct: 457 HGRTLGGQHVQLSL 470
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELY 75
I P + ++ + GR SG+A ++ S D A A QR HK M +RY+E++
Sbjct: 222 IRPHGVHMVLNQQGRPSGDAFIQMKSADRALVAAQRCHKKMMKERYVEVF 271
>gi|159485042|ref|XP_001700558.1| RNA binding protein [Chlamydomonas reinhardtii]
gi|158272198|gb|EDO98002.1| RNA binding protein [Chlamydomonas reinhardtii]
Length = 229
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 29/184 (15%)
Query: 31 NILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKS----NMGDRYIELYMEEGTSSKEAN 86
++ L GR +GEA V F + D+A+RA Q+ + GDRY+ +Y + +
Sbjct: 63 HVFLRKHPDGRPNGEAFVVFENSDEARRATQKDRETFGEKFGDRYVRVYPTLDSDIPD-- 120
Query: 87 GRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQC-CM 145
+++ P GV + RS+ ++ V S D+ +
Sbjct: 121 ---------MQAAPNGVQLVV-------------RSDNKPTGEKDHKVFSEKFGDRYGVL 158
Query: 146 RLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHK 205
+++G+P++ DV KF +I P G++ GR TG+A+I+F + A +A+ + +
Sbjct: 159 KMKGIPFKATAMDVRKFFANYKIKPEGVSFIMHADGRPTGMAFIEFETPQEAVRAMEKDR 218
Query: 206 EKIG 209
K G
Sbjct: 219 AKFG 222
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 37/72 (51%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D ++++GLP++ KED+ KF G + + + GR G A++ F + + A +A
Sbjct: 32 DGSVVKMKGLPFKGSKEDIIKFFAGFSLRTEHVFLRKHPDGRPNGEAFVVFENSDEARRA 91
Query: 201 LLRHKEKIGHRL 212
+ +E G +
Sbjct: 92 TQKDRETFGEKF 103
>gi|449284112|gb|EMC90693.1| Epithelial splicing regulatory protein 1 [Columba livia]
Length = 529
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 90/212 (42%), Gaps = 54/212 (25%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 165 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGSRYIEVYKAT 224
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 225 GEDFLKIAG-GTSNE--------------VAQFLSKE----------------------- 246
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F V G +T P R TG A++ F
Sbjct: 247 --NQVIVRMRGLPFNVTTEEVLAFFGQHCPVTGGKEGVLFVTYPD---SRPTGDAFVLFA 301
Query: 193 DKENAEKALLRHKEKIGHR---LVTLVMSGAQ 221
+E A+ AL +HK+ +G R + +LV AQ
Sbjct: 302 CEEYAQNALKKHKDLLGKRRLSVTSLVFCFAQ 333
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 146 NNAVIRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 205
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 206 LQRHKHHMGSRYIEVYKATGEDFL 229
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 113/276 (40%), Gaps = 65/276 (23%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF PV +L +T R +G+A V F+ + AQ AL++HK +G R + +
Sbjct: 268 FFGQHCPVTGGKEGVLFVTYPDSRPTGDAFVLFACEEYAQNALKKHKDLLGKRRLSV--- 324
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKW---MRRAKRSEMDWALKRQGAV 134
TS +FC +Q L ++ + + Q V
Sbjct: 325 --TSL----------------------VFCFAQVLNRYSSTPLIPLPTPPILPVLPQQFV 360
Query: 135 LSGSAVDQCCMRLQGLPYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFV 192
+ D C+RL+GLPY ED+ +FL +I +G+ + ++ GR +G A+IQ
Sbjct: 361 PPTNVRD--CIRLRGLPYAATIEDILEFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQM- 417
Query: 193 DKENAEKALLR----HKEKIGHRLVTLVMSGAQWF-------------LSPP---LTNET 232
++AE+A L HK+ + R V + A+ LSPP L +
Sbjct: 418 --KSAERAFLAAQKCHKKTMKDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLS 475
Query: 233 PISRLDLTGSPVRSTICVLCHP---LTPRSVRPRSV 265
P S + V T L P L PR+ +P +
Sbjct: 476 PPSYSFPAPAAVVPTEAALYQPSVLLNPRTFQPSTA 511
>gi|226487868|emb|CAX75599.1| Heterogeneous nuclear ribonucleoprotein H' [Schistosoma japonicum]
Length = 292
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+R++GLPY KED+++FL L+ V I + + A R TG A + F + A++A+ +
Sbjct: 121 SVRMRGLPYSATKEDIDRFLAPLQPV--NIRMRFNAASRPTGEAIVDFASHDEAKEAMKK 178
Query: 204 HKEKIGHRLVTLVMSGAQWFLSPP--LTNETPI 234
+EKIG R + L ++ +SPP + N P+
Sbjct: 179 DREKIGSRYIELFLASTPNGISPPSRVNNGAPV 211
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 39/55 (70%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
+F P+ PVNI + + A R +GEA V+F+S D+A+ A+++ + +G RYIEL++
Sbjct: 138 RFLAPLQPVNIRMRFNAASRPTGEAIVDFASHDEAKEAMKKDREKIGSRYIELFL 192
>gi|260797907|ref|XP_002593942.1| hypothetical protein BRAFLDRAFT_234856 [Branchiostoma floridae]
gi|229279174|gb|EEN49953.1| hypothetical protein BRAFLDRAFT_234856 [Branchiostoma floridae]
Length = 678
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 27/176 (15%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
G++ G VEF S D + AL+ HK MG RYIE+ T ++
Sbjct: 340 GKAIGSGFVEFKSYGDQKAALRMHKKYMGSRYIEVTSAPSTDMQKH-------------- 385
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
I +F K + +K + ++ L A +CCM + LPY+ K ++
Sbjct: 386 --------IQKFHTKPKKGSKSPGKEAKTTKE---LDPRA--KCCMHVWNLPYKASKREI 432
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTL 215
E F G I GI + + G +G +++FV + ++A +++G R+ L
Sbjct: 433 ENFFTGSTIAERGIHMVYTKTGEFSGEVFVEFVSISDCDRAYKLRAKRLGGRMALL 488
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 82/205 (40%), Gaps = 29/205 (14%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I++ D G +G+A V+F SV D A++ +K + R+IE+ S E+ +
Sbjct: 180 IVIEMDPFGNKTGKAFVKFKSVRDCSAAVRTYKEYLAARHIEVM-----SCTESQWQIAY 234
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA------------ 139
F TP V + + + M+ R + V+ S
Sbjct: 235 DFAKAVQTP-AVSYANTNTGMMQRMQPQPRQTQPPPQHSRSPVMPRSGAQQNRAQGTQRP 293
Query: 140 --------VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQF 191
D C+ L+GLPY K +DV F +GL I I G+ G +++F
Sbjct: 294 RSRSPIDRTDSMCISLKGLPYTAKDKDVRDFFKGLGIRKVWIDFED---GKAIGSGFVEF 350
Query: 192 VDKENAEKALLRHKEKIGHRLVTLV 216
+ + AL HK+ +G R + +
Sbjct: 351 KSYGDQKAALRMHKKYMGSRYIEVT 375
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 85/200 (42%), Gaps = 17/200 (8%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
G +G+A + F+S +DA++A+ R + + I LY+ +S KE R +
Sbjct: 37 GGDAGDAFIIFASDEDARQAMARTGNTIHGSPITLYL---SSRKEMQDRINMSRSTTFDS 93
Query: 100 PYGVGIFCI--SQFLAKWMRRAKRSEMDWA-----------LKRQGAVLSGSAVDQCCMR 146
P V + +Q A R + +A + S + Q C++
Sbjct: 94 PAPVATGNVEKTQSPAFGSRNVAPNGSSYAPPPVQESSYSSMSSSSYNSSQFSAAQTCIQ 153
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKE 206
L GL ++ GLEI +GI I D G TG A+++F + A+ +KE
Sbjct: 154 LFGLNTNVTVSEIHSLFSGLEIASDGIVIEMDPFGNKTGKAFVKFKSVRDCSAAVRTYKE 213
Query: 207 KIGHRLVTLVM-SGAQWFLS 225
+ R + ++ + +QW ++
Sbjct: 214 YLAARHIEVMSCTESQWQIA 233
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQGLP+ D+ F GL I G+ I G G A+I F E+A +A+
Sbjct: 3 VVIRLQGLPWSASAMDIRSFFSGLTIPDGGVHI----VGGDAGDAFIIFASDEDARQAMA 58
Query: 203 RHKEKIGHRLVTLVMS 218
R I +TL +S
Sbjct: 59 RTGNTIHGSPITLYLS 74
>gi|76155975|gb|AAX27224.2| SJCHGC06533 protein [Schistosoma japonicum]
Length = 249
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+R++GLPY KED+++FL L+ V I + + A R TG A + F + A++A+ +
Sbjct: 78 SVRMRGLPYSATKEDIDRFLAPLQPV--NIRMRFNAASRPTGEAIVDFASHDEAKEAMKK 135
Query: 204 HKEKIGHRLVTLVMSGAQWFLSPP--LTNETPI 234
+EKIG R + L ++ +SPP + N P+
Sbjct: 136 DREKIGSRYIELFLASTPNGISPPSRVNNGAPV 168
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 39/55 (70%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
+F P+ PVNI + + A R +GEA V+F+S D+A+ A+++ + +G RYIEL++
Sbjct: 95 RFLAPLQPVNIRMRFNAASRPTGEAIVDFASHDEAKEAMKKDREKIGSRYIELFL 149
>gi|226487878|emb|CAX75604.1| Heterogeneous nuclear ribonucleoprotein H' [Schistosoma japonicum]
Length = 292
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+R++GLPY KED+++FL L+ V I + + A R TG A + F + A++A+ +
Sbjct: 121 SVRMRGLPYSATKEDIDRFLAPLQPV--NIRMRFNAASRPTGEAIVDFASHDEAKEAMKK 178
Query: 204 HKEKIGHRLVTLVMSGAQWFLSPP--LTNETPI 234
+EKIG R + L ++ +SPP + N P+
Sbjct: 179 DREKIGSRYIELFLASTPNGISPPSRVNNGAPV 211
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 39/55 (70%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
+F P+ PVNI + + A R +GEA V+F+S D+A+ A+++ + +G RYIEL++
Sbjct: 138 RFLAPLQPVNIRMRFNAASRPTGEAIVDFASHDEAKEAMKKDREKIGSRYIELFL 192
>gi|324509132|gb|ADY43846.1| Heterogeneous nuclear ribonucleoprotein F [Ascaris suum]
Length = 192
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 82/196 (41%), Gaps = 52/196 (26%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
F + I +I +GR+SGE VE + + AL+ ++ + RYIE
Sbjct: 24 NFLQGITAKSITFTLTSSGRASGECYVELNDNSAVKEALKLDRNEINGRYIE-------- 75
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
+F +S E + A+ + V+ GS
Sbjct: 76 -----------------------VFTVS-------------EGELAMMVRHGVIRGSGES 99
Query: 142 QC------CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ +RL+GLPY +D+++F +GL++ + I + GR +G A+++ KE
Sbjct: 100 ESRYASNYVVRLRGLPYSANVDDIKEFFKGLDVAD--VVIDKEQGGRPSGEAFVRLASKE 157
Query: 196 NAEKALLRHKEKIGHR 211
+AE AL R K +G R
Sbjct: 158 HAELALERSKNNMGSR 173
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RL+GLP+ K+ DV FL+G I IT +GR +G Y++ D ++AL
Sbjct: 8 IRLRGLPFAAKESDVRNFLQG--ITAKSITFTLTSSGRASGECYVELNDNSAVKEALKLD 65
Query: 205 KEKIGHRLVTL 215
+ +I R + +
Sbjct: 66 RNEINGRYIEV 76
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRY 71
+FFK + ++++ + GR SGEA V +S + A+ AL+R K+NMG RY
Sbjct: 125 EFFKGLDVADVVIDKEQGGRPSGEAFVRLASKEHAELALERSKNNMGSRY 174
>gi|402589318|gb|EJW83250.1| hypothetical protein WUBG_05840 [Wuchereria bancrofti]
Length = 451
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 43/179 (24%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR+SGE VE A+ A + K M +RYIE
Sbjct: 2 GRASGECYVELVDKAAAEEAKRFDKQEMNNRYIE-------------------------- 35
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
+F +++ WM R + R+G +RL+G+P+ +DV
Sbjct: 36 -----VFNVTESEVVWMTRHN-------VIRKG---DQETPYNFVVRLRGIPFSATNDDV 80
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
++F GLE+ + I + GR +G A+++F K++AE AL R++ +G R V + S
Sbjct: 81 KEFFSGLEVAD--VVIDKELGGRPSGEAFVRFASKQHAEMALERNRNNMGSRYVEVFRS 137
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
+FF + ++++ + GR SGEA V F+S A+ AL+R+++NMG RY+E++ G
Sbjct: 82 EFFSGLEVADVVIDKELGGRPSGEAFVRFASKQHAEMALERNRNNMGSRYVEVFRSSG 139
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%)
Query: 11 LIHITYCLLCSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDR 70
L + L FFKP+ V I L ++ R SG+A V F +V +A+ A+ R+K +G+R
Sbjct: 242 LPYSANALDIEDFFKPLNCVEIQLGFNEDRRPSGDACVIFGTVGEARDAMSRNKQCIGNR 301
Query: 71 YIELY 75
YIEL+
Sbjct: 302 YIELF 306
>gi|241999526|ref|XP_002434406.1| RNA-binding protein, putative [Ixodes scapularis]
gi|215497736|gb|EEC07230.1| RNA-binding protein, putative [Ixodes scapularis]
Length = 1026
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D + ++GLPY C + DV +F GL I+ + + HD+ GR TG +++F K + + A
Sbjct: 631 DNTVVVMKGLPYSCSETDVLQFFSGLNIL--DLFVEHDHNGRATGTGFVEFASKRDFDAA 688
Query: 201 LLRHKEKIGHRLVTLVM 217
+ H+ K+GHR + L +
Sbjct: 689 MNMHRRKMGHRYIELTV 705
Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 52/196 (26%), Positives = 79/196 (40%), Gaps = 19/196 (9%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
QFF + +++ + D GR++G VEF+S D A+ H+ MG RYIEL + GT
Sbjct: 651 QFFSGLNILDLFVEHDHNGRATGTGFVEFASKRDFDAAMNMHRRKMGHRYIELTV--GTR 708
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
R G P G + R + E A L +V
Sbjct: 709 DSMHLARNADGV-----RPDGPAV----------PPRTREEEAPHHSPIPPAPLGHGSVP 753
Query: 142 --QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
C+ + GLP D+ F ++P I I G TG A+ +F + E+
Sbjct: 754 LAHTCVSMLGLPDTVTDRDIADFFSTQGVIPRAIHIMLGANGVPTGHAFAEFAAHADCER 813
Query: 200 ALLRHKEKIGHRLVTL 215
A L++ +G +TL
Sbjct: 814 AFLKNGASLGPHTITL 829
Score = 39.7 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+R+Q LP+ D+ ++ +GL I G+ I G G A+I F E+A +A+ R
Sbjct: 5 IRMQNLPWAANSLDIRRYFQGLGIPEGGVHI----VGGDKGDAFIAFSTDEDARQAMERD 60
Query: 205 KEKIGHRLVTLVMS 218
KI + L++S
Sbjct: 61 AGKIKEVRIKLLLS 74
Score = 37.4 bits (85), Expect = 8.8, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
CC+ ++GL E DV+ F GL I I + +G T V I+F +K +A +AL
Sbjct: 507 CCVEMRGLTGEPTPRDVKDFFRGLRIFSGCIRVATAESGVKTLV--IRFANKWDAREALH 564
Query: 203 RHKEKIGHRLVTLV 216
+ + G +TLV
Sbjct: 565 GNYKNFGGDAITLV 578
>gi|427788569|gb|JAA59736.1| Putative rna-binding protein [Rhipicephalus pulchellus]
Length = 1004
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKE 206
++GLPY ++DV +F GL ++ I + HD +GR TG+A+++F DK + E A+ +
Sbjct: 530 MKGLPYNTSEQDVLQFFSGLNVL--DILVEHDRSGRATGMAFVEFGDKRDFETAMSMQRR 587
Query: 207 KIGHRLVTL 215
KIGHR + L
Sbjct: 588 KIGHRYIEL 596
Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 51/202 (25%), Positives = 78/202 (38%), Gaps = 11/202 (5%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIEL------- 74
QFF + ++IL+ D +GR++G A VEF D + A+ + +G RYIEL
Sbjct: 544 QFFSGLNVLDILVEHDRSGRATGMAFVEFGDKRDFETAMSMQRRKIGHRYIELSVGSRDA 603
Query: 75 -YMEEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGA 133
Y + +G G +GVG M M A GA
Sbjct: 604 MYAARNGDNIRPDGMPVGRRDEEPPVGHGVGPDRGPDVGHGPMHGPG---MGPAAPAHGA 660
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVD 193
C+ + GLP D+ F ++P I I G TG A+ +F
Sbjct: 661 GHVLVPPGHTCVSMLGLPNTVTDRDIADFFSIQGVIPRAIHIMLGANGVPTGHAFAEFAT 720
Query: 194 KENAEKALLRHKEKIGHRLVTL 215
+ E+A L+ +G ++ L
Sbjct: 721 HADCERAFLQDGANLGPHVIAL 742
Score = 40.4 bits (93), Expect = 0.89, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 16/99 (16%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RLQ LP+ D+ ++ +GL I G+ I G G A+I F E+A +A+ R
Sbjct: 5 IRLQNLPWAANSLDIRRYFQGLNIPEGGVHI----VGGEKGDAFIAFGSDEDARQAMERD 60
Query: 205 KEKIGHRLVTLVMSG------------AQWFLSPPLTNE 231
KI + L++S AQ PP+ E
Sbjct: 61 GGKIKEVRIKLLLSSRAEMQRIIDQARAQHTAPPPVKKE 99
>gi|242017923|ref|XP_002429433.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212514365|gb|EEB16695.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 498
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 80/180 (44%), Gaps = 34/180 (18%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL + GRS+G+A V+F +A AL +HK +G RYIEL+
Sbjct: 76 ILFVKKPDGRSTGDAFVQFIHESEAIAALSKHKELIGTRYIELF---------------- 119
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKR---------SEMDWALKRQGAVLSGSAVDQ 142
+STP V + K R + + A Q + SG+ D
Sbjct: 120 -----RSTPAEVEQVSRNDIYIKAQESKPRVPAVQLPLVAPIPPAAVPQHVITSGTKKD- 173
Query: 143 CCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
C+RL+GLPYE + E + FL IV G+ + ++ G+ +G A+IQ + +A +A
Sbjct: 174 -CIRLRGLPYEAQVEHILDFLGDNANNIVLQGVHMVYNVHGQPSGEAFIQMDSEVSASQA 232
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 145 MRLQGLPYECK-KEDVEKFLEGLEIV-----PNGITIPHDYAGRCTGVAYIQFVDKENAE 198
+R++GLPYEC K+ ++ F EG + NGI GR TG A++QF+ + A
Sbjct: 42 IRMRGLPYECSSKQVIDFFREGEQSCDIFDGENGILFVKKPDGRSTGDAFVQFIHESEAI 101
Query: 199 KALLRHKEKIGHRLVTLVMS 218
AL +HKE IG R + L S
Sbjct: 102 AALSKHKELIGTRYIELFRS 121
>gi|442746139|gb|JAA65229.1| Putative splicing factor hnrnp-f, partial [Ixodes ricinus]
Length = 206
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 44/55 (80%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
+FF+P+ P+N+ L+ +D+GR SGE DVEF++ ++A +A+ + K++M RYIEL++
Sbjct: 129 EFFQPMNPMNVHLIYEDSGRPSGECDVEFATHEEAVKAMSKDKAHMQHRYIELFL 183
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 91/189 (48%), Gaps = 16/189 (8%)
Query: 41 RSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGG----FGGV 96
RS+GEA V+F++ D A++A+ +HK +G RYIE++ + A G G G
Sbjct: 1 RSTGEAFVQFATRDIAEKAMGKHKEKIGHRYIEIFKSSLQEIRSAVGMGVPKMMRPLGTA 60
Query: 97 KSTPYGVG--IFCISQFLAKWMRRAKRS-----EMDWALKRQGAVLSGSAVDQCCMRLQG 149
+ PY G S++ M R R+ E D G+ + + + ++G
Sbjct: 61 RPGPYDRGDRFGGPSRY---GMGRGGRNFRGFVEEDGYGDFGGSGGARYSATGHFVHMRG 117
Query: 150 LPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIG 209
LP+ + D+ +F + + P + + ++ +GR +G ++F E A KA+ + K +
Sbjct: 118 LPFRATERDIFEFFQPMN--PMNVHLIYEDSGRPSGECDVEFATHEEAVKAMSKDKAHMQ 175
Query: 210 HRLVTLVMS 218
HR + L ++
Sbjct: 176 HRYIELFLN 184
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 37/76 (48%), Gaps = 12/76 (15%)
Query: 182 RCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGAQWFLSP----------PL--T 229
R TG A++QF ++ AEKA+ +HKEKIGHR + + S Q S PL
Sbjct: 1 RSTGEAFVQFATRDIAEKAMGKHKEKIGHRYIEIFKSSLQEIRSAVGMGVPKMMRPLGTA 60
Query: 230 NETPISRLDLTGSPVR 245
P R D G P R
Sbjct: 61 RPGPYDRGDRFGGPSR 76
>gi|427788565|gb|JAA59734.1| Putative rna-binding protein [Rhipicephalus pulchellus]
Length = 1011
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKE 206
++GLPY ++DV +F GL ++ I + HD +GR TG+A+++F DK + E A+ +
Sbjct: 530 MKGLPYNTSEQDVLQFFSGLNVL--DILVEHDRSGRATGMAFVEFGDKRDFETAMSMQRR 587
Query: 207 KIGHRLVTL 215
KIGHR + L
Sbjct: 588 KIGHRYIEL 596
Score = 51.2 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 51/202 (25%), Positives = 78/202 (38%), Gaps = 11/202 (5%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIEL------- 74
QFF + ++IL+ D +GR++G A VEF D + A+ + +G RYIEL
Sbjct: 544 QFFSGLNVLDILVEHDRSGRATGMAFVEFGDKRDFETAMSMQRRKIGHRYIELSVGSRDA 603
Query: 75 -YMEEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGA 133
Y + +G G +GVG M M A GA
Sbjct: 604 MYAARNGDNIRPDGMPVGRRDEEPPVGHGVGPDRGPDVGHGPMHGPG---MGPAAPAHGA 660
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVD 193
C+ + GLP D+ F ++P I I G TG A+ +F
Sbjct: 661 GHVLVPPGHTCVSMLGLPNTVTDRDIADFFSIQGVIPRAIHIMLGANGVPTGHAFAEFAT 720
Query: 194 KENAEKALLRHKEKIGHRLVTL 215
+ E+A L+ +G ++ L
Sbjct: 721 HADCERAFLQDGANLGPHVIAL 742
Score = 40.4 bits (93), Expect = 0.96, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 16/99 (16%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RLQ LP+ D+ ++ +GL I G+ I G G A+I F E+A +A+ R
Sbjct: 5 IRLQNLPWAANSLDIRRYFQGLNIPEGGVHI----VGGEKGDAFIAFGSDEDARQAMERD 60
Query: 205 KEKIGHRLVTLVMSG------------AQWFLSPPLTNE 231
KI + L++S AQ PP+ E
Sbjct: 61 GGKIKEVRIKLLLSSRAEMQRIIDQARAQHTAPPPVKKE 99
>gi|219111791|ref|XP_002177647.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410532|gb|EEC50461.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 245
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 101/217 (46%), Gaps = 29/217 (13%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
F+ +V +++++ S G+A V F++ D Q ALQR + +G R++E+ +
Sbjct: 22 LFQGLVVIDVVI------SSQGDAFVIFANPMDFQMALQRDRQTIGRRFVEIVAATRSEY 75
Query: 83 KEANGRGTGG-------------FGGVKSTP----YGVGI--FCISQFLAKWMRRAKRSE 123
+A + + G GG+ S P YG G+ + + +++
Sbjct: 76 YDAIAKKSAGESASAMASLWGGSQGGMNSLPPQGGYGEGMQHHGLLGMGPRLTGMSRQGG 135
Query: 124 MDWALKRQ--GAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAG 181
+ L+++ G + G +R++GLP+ ++D+ KF G + + + G
Sbjct: 136 IHTPLQKRTGGGIQVGEHT--GFLRVRGLPFSATRDDIFKFFLGYNPTQESVVLTYRNDG 193
Query: 182 RCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
R TG AYI F +++++A+ H+ +G R V L +S
Sbjct: 194 RATGEAYIGFATADDSKRAMELHRRVMGSRYVELFIS 230
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
Query: 22 QFFKPIVPV--NILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
+FF P +++L + GR++GEA + F++ DD++RA++ H+ MG RY+EL++
Sbjct: 173 KFFLGYNPTQESVVLTYRNDGRATGEAYIGFATADDSKRAMELHRRVMGSRYVELFI--- 229
Query: 80 TSSKEANGRGTGGFGG 95
S+K+ +GR FGG
Sbjct: 230 -SNKDEHGRALARFGG 244
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C RL+ LPY+ ED+ +GL ++ D G A++ F + + + AL R
Sbjct: 4 CARLRNLPYDAALEDILILFQGLVVI--------DVVISSQGDAFVIFANPMDFQMALQR 55
Query: 204 HKEKIGHRLVTLVMS 218
++ IG R V +V +
Sbjct: 56 DRQTIGRRFVEIVAA 70
>gi|390363422|ref|XP_003730367.1| PREDICTED: uncharacterized protein LOC100888204 [Strongylocentrotus
purpuratus]
Length = 1832
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 86/193 (44%), Gaps = 37/193 (19%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEAN 86
I P + + D GR +G A+++ D +AL+RH+ MG RYI++
Sbjct: 608 IAPDGVQIHRDHRGRITGTANIKLQGPSDIDQALKRHQQYMGKRYIDVRP---------- 657
Query: 87 GRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG--SAVDQC- 143
C+ ++W + + S + + +R + + G S + C
Sbjct: 658 --------------------CLQ---SEWEKEKQVSSAEPSKRRSRSPVRGRNSPLRNCN 694
Query: 144 -CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
C+ ++GL K D+ F EGL + + I + + G +G+AY++F+D + A +A
Sbjct: 695 TCIEMRGLASFTKNSDIVDFFEGLAMRQDSIYLDPNKDGSGSGIAYLEFIDPDMARRACQ 754
Query: 203 RHKEKIGHRLVTL 215
++ + R V++
Sbjct: 755 KNGRQFNRRTVSI 767
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 3/119 (2%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVD 193
+L S + +RL GLP++C V FL + I P+G+ I D+ GR TG A I+
Sbjct: 574 LLEPSGDEFYAVRLTGLPFDCTDRGVRLFLRDINIAPDGVQIHRDHRGRITGTANIKLQG 633
Query: 194 KENAEKALLRHKEKIGHRLVTLVMS-GAQWFLSPPLTNETPISRLDLTGSPVRSTICVL 251
+ ++AL RH++ +G R + + ++W +++ P R + SPVR L
Sbjct: 634 PSDIDQALKRHQQYMGKRYIDVRPCLQSEWEKEKQVSSAEPSKR--RSRSPVRGRNSPL 690
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENA 197
C ++ +PY + D+ F GL+IVP GI I + G+ TG +I+F D NA
Sbjct: 1492 VCAHIRNVPYSARWPDIAHFFSGLQIVPGGIHIMVNSEGKPTGHCFIEFADAHNA 1546
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RLQGLP+ +D+ + EGL I G+ I G G +I F E+A KA+ R
Sbjct: 4 LRLQGLPWTATAKDIRQHFEGLSIPDGGVHI----IGGEEGDVFIAFGSDEDARKAMQRQ 59
Query: 205 KEKI-GHRLVTLVMSGAQ 221
K+ + G R++ L+ S ++
Sbjct: 60 KQPLNGGRIMLLLSSKSE 77
>gi|432118737|gb|ELK38193.1| Epithelial splicing regulatory protein 1 [Myotis davidii]
Length = 596
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 105/250 (42%), Gaps = 51/250 (20%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY--- 75
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 210 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 269
Query: 76 ------MEEGTSSKEAN-----------GRG--------------------TGGFGGVKS 98
+ GTS++ A RG TGG G+
Sbjct: 270 GEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATADEVVAFFGQHCPITGGKEGILF 329
Query: 99 TPYGVGIFCISQFL----AKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYEC 154
Y G F+ ++ + A R D + Q V + D C+RL+GLPY
Sbjct: 330 VTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLVLPQQFVPPTNVRD--CIRLRGLPYAA 387
Query: 155 KKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKIGHR 211
ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ + R
Sbjct: 388 TIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAYLAAQKCHKKTMKDR 447
Query: 212 LVTLVMSGAQ 221
V + A+
Sbjct: 448 YVEVFQCSAE 457
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 191 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 250
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 251 LQRHKHHMGTRYIEVYKATGEDFL 274
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELYMEEGTSSKEANGRGT 90
+ ++ + GR SG+A ++ S D A A Q+ HK M DRY+E++ S++E N
Sbjct: 408 VHMVLNHQGRPSGDAFIQMKSADRAYLAAQKCHKKTMKDRYVEVFQ---CSAEEMNFVLM 464
Query: 91 GG 92
GG
Sbjct: 465 GG 466
>gi|428170681|gb|EKX39604.1| hypothetical protein GUITHDRAFT_54250, partial [Guillardia theta
CCMP2712]
Length = 186
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 86/199 (43%), Gaps = 36/199 (18%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
+FFK I+ I + GR +GEA V F + +D +RAL R + M RY+E+Y
Sbjct: 18 EFFKGCAILKDGINFVLSHGGRPAGEAFVTFETENDCRRALMRDRDLMNKRYVEVY---- 73
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA 139
SS++ A S + +A Q + S
Sbjct: 74 PSSEDEK------------------------------HVAITSAVSYAQDDQSSGGDPST 103
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
+ ++L+GLPY +D+ F L I +GI I + R G A+++F D+ ++
Sbjct: 104 SYKGVVKLRGLPYSITADDIRSFFGHLSIKEDGIIICLNRERRNNGEAFVEFTDEYVVDE 163
Query: 200 ALLRHKEKIGHRLVTLVMS 218
A+ + ++ IG R V + S
Sbjct: 164 AVKKDRQMIGSRYVEVFRS 182
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%)
Query: 146 RLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHK 205
R++GLPY D+E+F +G I+ +GI + GR G A++ F + + +AL+R +
Sbjct: 3 RVRGLPYSAATADIEEFFKGCAILKDGINFVLSHGGRPAGEAFVTFETENDCRRALMRDR 62
Query: 206 EKIGHRLVTL 215
+ + R V +
Sbjct: 63 DLMNKRYVEV 72
>gi|395735012|ref|XP_002814888.2| PREDICTED: G-rich sequence factor 1 [Pongo abelii]
Length = 459
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 66/159 (41%), Gaps = 46/159 (28%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 183 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 234
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 235 -----------------------------------ALMKSLQVKSSPVVNDGVVRLRGLP 259
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAG-RCTGVAYI 189
Y C ++D+ F GL IV IT DY G R TG AY+
Sbjct: 260 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYV 296
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 398 NFFAPLKPVRITMEYSSSGKATGEADVHFETHEDAVAAMHKDRSHVYHRYIELFL 452
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVP--NGITIPHDYAGRCTGVAYIQFVDKENAE 198
D +R QGLP+ C EDV F I NGI + G+ G A I+ +++ +
Sbjct: 149 DVFLIRAQGLPWSCTVEDVLNFFSDCRIRKGENGIHFLLNRDGKRRGDALIEMESEQDVQ 208
Query: 199 KALLRHKEKIGHRLVTL 215
KAL +H+ +G R V +
Sbjct: 209 KALEKHRMYMGQRYVEV 225
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+ ++GLP++ +D+ F L+ P IT+ + +G+ TG A + F E+A A+ +
Sbjct: 382 VHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEADVHFETHEDAVAAMHKD 439
Query: 205 KEKIGHRLVTLVMS 218
+ + HR + L ++
Sbjct: 440 RSHVYHRYIELFLN 453
>gi|156401541|ref|XP_001639349.1| predicted protein [Nematostella vectensis]
gi|156226477|gb|EDO47286.1| predicted protein [Nematostella vectensis]
Length = 341
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%)
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
G +D +R +GLP++ +DV F GL I GI + GR G A+I+F + ++
Sbjct: 5 GPVLDDTVLRARGLPWQASDQDVANFFRGLNIPRGGIAFCLNMQGRRNGEAFIRFENGDH 64
Query: 197 AEKALLRHKEKIGHRLVTLVMSGAQWFL 224
+ AL RHK +G R + + + AQ FL
Sbjct: 65 RDLALRRHKMHLGTRYIEVYKASAQDFL 92
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 93/202 (46%), Gaps = 17/202 (8%)
Query: 22 QFFKPIVPV-----NILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
+FF VPV IL++ G+++G+A V F + + + AL++H+ +G RY+EL+
Sbjct: 129 RFFGDDVPVYRGEGGILMVRGRNGKATGDAFVLFETEEHGRAALKKHREVLGSRYVELFR 188
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
+ ++ + + +G+ ++ + + +
Sbjct: 189 SSQSEVQQVLS---------SLSLFMMGVPPLAMLPNPLPQHPPFHPPMFLPGPVPYAAN 239
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDK 194
G + + C+RL+GLP+ +DV FL+ + P G+ + ++ GR +G AY+Q +
Sbjct: 240 GGSNAKDCLRLRGLPFSATVQDVLDFLKEHAAYVAPGGVHMVYNTQGRPSGDAYVQLLSP 299
Query: 195 ENAEKALLR-HKEKIGHRLVTL 215
+ A A HK +G R + +
Sbjct: 300 DFAAAAANELHKHHMGERYIEV 321
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 78/187 (41%), Gaps = 54/187 (28%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR +GEA + F + D AL+RHK ++G RYIE+Y
Sbjct: 49 GRRNGEAFIRFENGDHRDLALRRHKMHLGTRYIEVY------------------------ 84
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD---QCCMRLQGLPYECKK 156
K S D+ +G ++ + V + +R++GLP+ K
Sbjct: 85 --------------------KASAQDFLRIVRGMSIAANFVSTNAEVIIRMRGLPFSTKA 124
Query: 157 EDVEKFLEGLEIVP-----NGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
DV +F + VP GI + G+ TG A++ F +E+ AL +H+E +G R
Sbjct: 125 ADVVRFFG--DDVPVYRGEGGILMVRGRNGKATGDAFVLFETEEHGRAALKKHREVLGSR 182
Query: 212 LVTLVMS 218
V L S
Sbjct: 183 YVELFRS 189
>gi|225435437|ref|XP_002285426.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Vitis
vinifera]
Length = 258
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 88/199 (44%), Gaps = 25/199 (12%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
++FF + V++L + + GR +GEA + ALQR++ NMG RY+E++ +
Sbjct: 72 VAEFFHSLDIVDVLFVHKN-GRFTGEAFCVLGYPLQVEFALQRNRQNMGRRYVEVFRSK- 129
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA 139
+ Y +S RR ++ A +G
Sbjct: 130 -----------------RQEYYKAIANEVSDTRGGSPRRTAPKAKSNDEGKESAEHTG-- 170
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
+RL+GLP+ KED+ F + + + I + + GR TG A+++F + E+++
Sbjct: 171 ----VLRLRGLPFSASKEDIMDFFKDFVLSEDSIHMTVNSEGRPTGEAFVEFTNAEDSKA 226
Query: 200 ALLRHKEKIGHRLVTLVMS 218
A+ + + +G R + L S
Sbjct: 227 AMAKDRMTLGSRYIELFPS 245
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP++C + DV +F L+IV + H GR TG A+ E AL R
Sbjct: 57 VVRLRGLPFDCSEADVAEFFHSLDIV--DVLFVHK-NGRFTGEAFCVLGYPLQVEFALQR 113
Query: 204 HKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVRST 247
+++ +G R V + S Q + + NE +R GSP R+
Sbjct: 114 NRQNMGRRYVEVFRSKRQEYYK-AIANEVSDTR---GGSPRRTA 153
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 22 QFFKPIV--PVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
FFK V +I + + GR +GEA VEF++ +D++ A+ + + +G RYIEL+
Sbjct: 188 DFFKDFVLSEDSIHMTVNSEGRPTGEAFVEFTNAEDSKAAMAKDRMTLGSRYIELFPSSL 247
Query: 80 TSSKEANGRG 89
EA RG
Sbjct: 248 EELDEAVARG 257
>gi|405968884|gb|EKC33911.1| Epithelial splicing regulatory protein 2 [Crassostrea gigas]
Length = 727
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 101/256 (39%), Gaps = 66/256 (25%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I + L GR +GEA V + + AL+RHK ++G RYIE+Y
Sbjct: 241 ARFFKGLNIAKGGVALCLSPQGRRNGEALVRLENEQNRDLALKRHKHHIGQRYIEVY--- 297
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
+A G+ G SE L R G V+
Sbjct: 298 -----KATGKDFVNVAG-----------------------GSNSEAQAFLSRGGQVI--- 326
Query: 139 AVDQCCMRLQGLPYECKKEDVEKF---------LEGLEIVPNGITIPHDYAGRCTGVAYI 189
+R++GLP+ + V +F L+G E GI H GR TG A++
Sbjct: 327 ------IRMRGLPFTATAQQVLEFFAREPSVSVLDGEE----GILFVHYPDGRSTGDAFV 376
Query: 190 QFVDKENAEKALLRHKEKIGHRLVTLVMSGA---QWFLSPPLTNETPISRLDLTGSPVRS 246
+E+A AL +H+E +G R + L S Q L+ + P P +
Sbjct: 377 LLASEEDAVSALKKHREIMGTRYIELFKSTTAEVQQVLNRSMDPRNP--------EPQET 428
Query: 247 TICVLCHPLTPRSVRP 262
+ + LTP+S P
Sbjct: 429 PLPAILTQLTPQSQLP 444
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G+ + GR G A ++ +++N + A
Sbjct: 222 DNHVVRARGLPWQSSDQDIARFFKGLNIAKGGVALCLSPQGRRNGEALVRLENEQNRDLA 281
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFLS 225
L RHK IG R + + + + F++
Sbjct: 282 LKRHKHHIGQRYIEVYKATGKDFVN 306
>gi|341882686|gb|EGT38621.1| hypothetical protein CAEBREN_04314 [Caenorhabditis brenneri]
Length = 591
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 76/184 (41%), Gaps = 53/184 (28%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR +GEA VEF + +DA + ++ + M RYIE
Sbjct: 100 GRPNGEAYVEFETKEDAGKGMENDRKEMSSRYIE-------------------------- 133
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
IF + + A+ R + G + +RL+G+P+ CK+EDV
Sbjct: 134 -----IFTVPESEAELEFRPE--------------PDGVGEENHVVRLRGIPWSCKEEDV 174
Query: 160 EKFLEGLEIVP-----NGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVT 214
+F GL+ P G P R +G A+++F + AEKA+ + +G R V
Sbjct: 175 LQFFAGLDPPPAETVIGGTGGPKS---RPSGEAFVRFATQAAAEKAMEYNNRHMGTRYVE 231
Query: 215 LVMS 218
+ MS
Sbjct: 232 VFMS 235
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
FF P+ +I L ++ GR SG+A EF S D Q L R+ MG RY+EL+ G
Sbjct: 338 FFSPLRCHSIKLGVNETGRPSGDAIAEFDSFGDLQAGLSRNNQRMGRRYVELFDTRG 394
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 87/221 (39%), Gaps = 34/221 (15%)
Query: 22 QFFKPIVPVNILLLTDDAG----RSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
QFF + P + G R SGEA V F++ A++A++ + +MG RY+E++M
Sbjct: 176 QFFAGLDPPPAETVIGGTGGPKSRPSGEAFVRFATQAAAEKAMEYNNRHMGTRYVEVFMS 235
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQF------------------LAKWMRRA 119
A G G+ G + T GI + + R A
Sbjct: 236 SMVEFNRAKGGGSAA-GSYERT----GIRPLMSLDRSDSGYGRGGSYGGYGGYDDYSRGA 290
Query: 120 KRSEMDWALKR-----QGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGIT 174
D+ G S D + ++GLPY+ + VE F L + I
Sbjct: 291 YGGHQDYGYSSYNQGGYGGDYGRSNDDPLRIYMRGLPYDADQYAVEAFFSPLRC--HSIK 348
Query: 175 IPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTL 215
+ + GR +G A +F + + L R+ +++G R V L
Sbjct: 349 LGVNETGRPSGDAIAEFDSFGDLQAGLSRNNQRMGRRYVEL 389
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RL+GLP+ ++D+ +F GL I GR G AY++F KE+A K +
Sbjct: 67 VRLRGLPFNATEKDIHEFFNGLTIKRVKFVC---TTGRPNGEAYVEFETKEDAGKGMEND 123
Query: 205 KEKIGHRLVTL 215
++++ R + +
Sbjct: 124 RKEMSSRYIEI 134
>gi|341899985|gb|EGT55920.1| hypothetical protein CAEBREN_28420 [Caenorhabditis brenneri]
Length = 591
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 76/184 (41%), Gaps = 53/184 (28%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR +GEA VEF + +DA + ++ + M RYIE
Sbjct: 100 GRPNGEAYVEFETKEDAGKGMENDRKEMSSRYIE-------------------------- 133
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
IF + + A+ R + G + +RL+G+P+ CK+EDV
Sbjct: 134 -----IFTVPESEAELEFRPE--------------PDGVGEENHVVRLRGIPWSCKEEDV 174
Query: 160 EKFLEGLEIVP-----NGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVT 214
+F GL+ P G P R +G A+++F + AEKA+ + +G R V
Sbjct: 175 LQFFAGLDPPPAETVIGGTGGPKS---RPSGEAFVRFATQAAAEKAMEYNNRHMGTRYVE 231
Query: 215 LVMS 218
+ MS
Sbjct: 232 VFMS 235
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
FF P+ +I L ++ GR SG+A EF S D Q L R+ MG RY+EL+ G
Sbjct: 338 FFSPLRCHSIKLGVNETGRPSGDAIAEFDSFGDLQAGLSRNNQRMGRRYVELFDTRG 394
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 87/221 (39%), Gaps = 34/221 (15%)
Query: 22 QFFKPIVPVNILLLTDDAG----RSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
QFF + P + G R SGEA V F++ A++A++ + +MG RY+E++M
Sbjct: 176 QFFAGLDPPPAETVIGGTGGPKSRPSGEAFVRFATQAAAEKAMEYNNRHMGTRYVEVFMS 235
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQF------------------LAKWMRRA 119
A G G+ G + T GI + + R A
Sbjct: 236 SMVEFNRAKGGGSAA-GSYERT----GIRPLMSLDRSDSGYGRGGSYGGYGGYDDYSRGA 290
Query: 120 KRSEMDWALKR-----QGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGIT 174
D+ G S D + ++GLPY+ + VE F L + I
Sbjct: 291 YGGHQDYGYSSYNQGGYGGDYGRSNDDPLRIYMRGLPYDADQYAVEAFFSPLRC--HSIK 348
Query: 175 IPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTL 215
+ + GR +G A +F + + L R+ +++G R V L
Sbjct: 349 LGVNETGRPSGDAIAEFDSFGDLQAGLSRNNQRMGRRYVEL 389
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RL+GLP+ ++D+ +F GL I GR G AY++F KE+A K +
Sbjct: 67 VRLRGLPFNATEKDIHEFFNGLTIKRVKFVC---TTGRPNGEAYVEFETKEDAGKGMEND 123
Query: 205 KEKIGHRLVTL 215
++++ R + +
Sbjct: 124 RKEMSSRYIEI 134
>gi|24653903|ref|NP_725480.1| fusilli, isoform A [Drosophila melanogaster]
gi|7303049|gb|AAF58117.1| fusilli, isoform A [Drosophila melanogaster]
Length = 557
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 81/186 (43%), Gaps = 20/186 (10%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+L + GR++G+A V F++ DA +AL RH+ ++G RYIEL+ ++ R
Sbjct: 83 VLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQRYIELFRSTTAEVQQVLNRSMD 142
Query: 92 G----FGGVKSTP--------------YGVGIFCISQFLAKWMRRAKRSEMDWALKRQGA 133
GG S P VG +S L AL
Sbjct: 143 PKNYESGGGHSQPPLIAQLPTMQLPLLPQVGAHSLSHSLGASPANLCPPVPPPALPLPTQ 202
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQF 191
L S + C+RL+GLPYE E + FL+ I+ G+ + + G+ +G A+IQ
Sbjct: 203 HLITSGTTKNCIRLRGLPYEAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQM 262
Query: 192 VDKENA 197
+E+A
Sbjct: 263 DLEESA 268
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 68/167 (40%), Gaps = 47/167 (28%)
Query: 59 ALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRR 118
AL+RHK ++G RYIE+Y G FLA
Sbjct: 2 ALKRHKHHIGTRYIEVYRASG-----------------------------EDFLAIAGGA 32
Query: 119 AKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVP-------N 171
+ ++ A LS A Q +R++GLPY+ + V F + P
Sbjct: 33 SNEAQ---------AFLSKGA--QVIIRMRGLPYDATAKQVLDFFTTGDTPPCHVLDGNE 81
Query: 172 GITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
G+ GR TG A++ F ++ +A KAL RH+E IG R + L S
Sbjct: 82 GVLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQRYIELFRS 128
>gi|24653910|ref|NP_725483.1| fusilli, isoform B [Drosophila melanogaster]
gi|21645398|gb|AAM70984.1| fusilli, isoform B [Drosophila melanogaster]
gi|27820059|gb|AAO25059.1| GH20047p [Drosophila melanogaster]
gi|71834259|gb|AAZ41802.1| GH11127p [Drosophila melanogaster]
gi|220947106|gb|ACL86096.1| fus-PB [synthetic construct]
Length = 633
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 81/186 (43%), Gaps = 20/186 (10%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+L + GR++G+A V F++ DA +AL RH+ ++G RYIEL+ ++ R
Sbjct: 83 VLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQRYIELFRSTTAEVQQVLNRSMD 142
Query: 92 G----FGGVKSTP--------------YGVGIFCISQFLAKWMRRAKRSEMDWALKRQGA 133
GG S P VG +S L AL
Sbjct: 143 PKNYESGGGHSQPPLIAQLPTMQLPLLPQVGAHSLSHSLGASPANLCPPVPPPALPLPTQ 202
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQF 191
L S + C+RL+GLPYE E + FL+ I+ G+ + + G+ +G A+IQ
Sbjct: 203 HLITSGTTKNCIRLRGLPYEAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQM 262
Query: 192 VDKENA 197
+E+A
Sbjct: 263 DLEESA 268
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 68/167 (40%), Gaps = 47/167 (28%)
Query: 59 ALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRR 118
AL+RHK ++G RYIE+Y G FLA
Sbjct: 2 ALKRHKHHIGTRYIEVYRASG-----------------------------EDFLAIAGGA 32
Query: 119 AKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVP-------N 171
+ ++ A LS A Q +R++GLPY+ + V F + P
Sbjct: 33 SNEAQ---------AFLSKGA--QVIIRMRGLPYDATAKQVLDFFTTGDTPPCHVLDGNE 81
Query: 172 GITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
G+ GR TG A++ F ++ +A KAL RH+E IG R + L S
Sbjct: 82 GVLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQRYIELFRS 128
>gi|393909284|gb|EFO25784.2| hypothetical protein LOAG_02706 [Loa loa]
Length = 229
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 89/224 (39%), Gaps = 48/224 (21%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L GR +GEA V F + + AL+RH+ + +RYIE+Y
Sbjct: 8 IALCLSPEGRRNGEALVRFEDSEQRELALRRHRHFLHNRYIEVYRATRND---------- 57
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
Q A A R +S + +R++GLP
Sbjct: 58 ----------------FLQIAAGSNSEAVR------------FVSRGSTGAMIVRMRGLP 89
Query: 152 YECKKEDVEKFL----EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEK 207
Y+C + + +F G ++ GI + GR TG A++ F +E +KAL +HK
Sbjct: 90 YDCTEAQILEFFAEGENGCKVTDGGILFVNKSDGRPTGDAFVMFDSEEAGQKALTKHKRT 149
Query: 208 IGHRLVTLVMSG---AQWFLSPPLTNETPISRLDLTGSPVRSTI 248
IG R + L S Q ++ L N+ R+ + GS + I
Sbjct: 150 IGTRYIELFRSTQAEVQQVVNRNLEND---QRMIVHGSSRKDCI 190
>gi|291232395|ref|XP_002736145.1| PREDICTED: RNA binding motif protein 12-like [Saccoglossus
kowalevskii]
Length = 983
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 48/76 (63%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D C+RLQGLP+ E+++KF GLEI +GI I D G+ TG +++F ++ + ++A
Sbjct: 467 DGFCVRLQGLPFSSSDENIKKFFAGLEIDRDGIRISTDSFGKRTGDGFVKFRNQMDHQEA 526
Query: 201 LLRHKEKIGHRLVTLV 216
L R + +G R + ++
Sbjct: 527 LKRSMKYMGTRYIKVI 542
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 79/192 (41%), Gaps = 29/192 (15%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + TD G+ +G+ V+F + D Q AL+R MG RYI+
Sbjct: 499 IRISTDSFGKRTGDGFVKFRNQMDHQEALKRSMKYMGTRYIK------------------ 540
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDW-------ALKRQGAVLSGSAVDQCC 144
V P V C + F + R A S+ + + D C
Sbjct: 541 ----VIPCPEKVWASCGADFERRHSRDAFHSDRQHQDAPNFSSRSSHRSRSRSPIRDSLC 596
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+ L+GLP+ + F +GL++ I + + G C G Y++F + KAL R+
Sbjct: 597 VSLRGLPFVTNTSHIFDFFKGLDVPEENIFLEVNEKGNCKGAGYVEFKTVHDFRKALARN 656
Query: 205 KEKIGHRLVTLV 216
++ IG R VT++
Sbjct: 657 RQYIGTRFVTVM 668
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 103/238 (43%), Gaps = 20/238 (8%)
Query: 11 LIHITYCLLCSQFFKPI-VPV-NILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMG 68
L +T FFK + VP NI L ++ G G VEF +V D ++AL R++ +G
Sbjct: 602 LPFVTNTSHIFDFFKGLDVPEENIFLEVNEKGNCKGAGYVEFKTVHDFRKALARNRQYIG 661
Query: 69 DRYIELY------MEEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRS 122
R++ + M+ S R +TP + K K
Sbjct: 662 TRFVTVMAIAKEDMKAQIRSHPNWMRTVSQMSTAPATP--------TSDDKKLPLEDKIE 713
Query: 123 EMDWALKRQGAVLSG--SAVDQ-CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDY 179
+K +G+ + S D+ C+R++ +PY + ++ FL G+ IV GI ++
Sbjct: 714 PPKDDVKEKGSSENAPKSITDEGTCIRMKNIPYASNRGEILHFLSGIAIVHQGIERTYNE 773
Query: 180 AGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRL 237
G T AYI+F E+A++A R++ KI R + + L L + P+ +L
Sbjct: 774 KGLHTDEAYIEFYSVEDAKRAEARNEGKIRDRTIYITRVSKSEMLQ-RLKDNEPLQQL 830
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RLQGLP+ DV F +GL I G+ I G +G A+I F E A KA+L
Sbjct: 5 IRLQGLPWAASALDVRHFFKGLTIPDGGVHI----VGGESGDAFIAFGGDEEARKAMLIT 60
Query: 205 KEKIGHRLVTLVMS 218
+ + +TL++S
Sbjct: 61 NQPLCGSKITLMLS 74
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
C + +PY D+ F G ++P+ + I + AGR TG A + F A +AL
Sbjct: 907 CVVGATNIPYSATIPDILNFFNGYGVLPDSVRIHFNDAGRPTGDALVAFDGPHEANRALR 966
Query: 203 R-HKEKIGHRLVTLVMS 218
+ +G R V L M+
Sbjct: 967 DLNNTFMGPRKVQLYMA 983
>gi|312070751|ref|XP_003138291.1| hypothetical protein LOAG_02706 [Loa loa]
Length = 224
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 89/224 (39%), Gaps = 48/224 (21%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L GR +GEA V F + + AL+RH+ + +RYIE+Y
Sbjct: 3 IALCLSPEGRRNGEALVRFEDSEQRELALRRHRHFLHNRYIEVYRATRND---------- 52
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
Q A A R +S + +R++GLP
Sbjct: 53 ----------------FLQIAAGSNSEAVR------------FVSRGSTGAMIVRMRGLP 84
Query: 152 YECKKEDVEKFL----EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEK 207
Y+C + + +F G ++ GI + GR TG A++ F +E +KAL +HK
Sbjct: 85 YDCTEAQILEFFAEGENGCKVTDGGILFVNKSDGRPTGDAFVMFDSEEAGQKALTKHKRT 144
Query: 208 IGHRLVTLVMSG---AQWFLSPPLTNETPISRLDLTGSPVRSTI 248
IG R + L S Q ++ L N+ R+ + GS + I
Sbjct: 145 IGTRYIELFRSTQAEVQQVVNRNLEND---QRMIVHGSSRKDCI 185
>gi|341877456|gb|EGT33391.1| hypothetical protein CAEBREN_08325 [Caenorhabditis brenneri]
Length = 569
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 76/176 (43%), Gaps = 30/176 (17%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR+ G+A V F++ DD RAL++ + ++G RYIE++ + + +
Sbjct: 40 GRTCGDATVTFTNEDDYNRALKKDREHLGSRYIEVFPFDSAPRRRGD------------- 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
+ R + S D A R G +RL+GLP+ D+
Sbjct: 87 -------RDDYRPRSFPPRDRYS--DRAGPRGGL--------DPIVRLRGLPFSVTIRDI 129
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTL 215
F L IV +GI +P R G AY+ F E+ + A RH + IGHR + +
Sbjct: 130 NDFFAPLPIVRDGILLPDQQQARPGGEAYVCFESMESMQIAKQRHMKNIGHRYIEV 185
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 21 SQFFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
+ FF P IV ILL R GEA V F S++ Q A QRH N+G RYIE++
Sbjct: 130 NDFFAPLPIVRDGILLPDQQQARPGGEAYVCFESMESMQIAKQRHMKNIGHRYIEVF 186
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 23 FFKPIVPVNILLLTD-DAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
FF PI P + L+ D R SG+A V F + D AL + K MG+RYIE+ + G
Sbjct: 510 FFHPIRPNQVELIRDYQFQRPSGDARVIFFNRKDYDDALMKDKQYMGERYIEMIPDNG 567
>gi|356527218|ref|XP_003532209.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Glycine
max]
Length = 260
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 32/217 (14%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
++FF + V++L + G+ +GE ALQR++ NMG RY+E++ +
Sbjct: 74 VAEFFHGLDIVDVLFVHK-GGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEVFRSK- 131
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA 139
+ Y +S RR+ + + A +G
Sbjct: 132 -----------------RQEYYKAIANEVSDARGGSPRRSASRAKSYDEGKDSAEHTG-- 172
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
+RL+GLP+ K+D+ +F + + + I I + GR +G AY +F E+++
Sbjct: 173 ----VLRLRGLPFSASKDDIMEFFKDFGLPEDSIHIIMNSEGRPSGEAYAEFASAEDSKA 228
Query: 200 ALLRHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISR 236
A+++ + +G R + L F S P E ISR
Sbjct: 229 AMVKDRMTLGSRYIEL-------FPSSPGEMEEAISR 258
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP++C + DV +F GL+IV + H G+ TG + + AL R
Sbjct: 59 VVRLRGLPFDCTETDVAEFFHGLDIVD--VLFVHK-GGKFTGEGFCVLGYPLQVDFALQR 115
Query: 204 HKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVRST 247
+++ +G R V + S Q + + NE +R GSP RS
Sbjct: 116 NRQNMGRRYVEVFRSKRQEYYK-AIANEVSDAR---GGSPRRSA 155
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 22 QFFKPI-VPVN-ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
+FFK +P + I ++ + GR SGEA EF+S +D++ A+ + + +G RYIEL+
Sbjct: 190 EFFKDFGLPEDSIHIIMNSEGRPSGEAYAEFASAEDSKAAMVKDRMTLGSRYIELFPSSP 249
Query: 80 TSSKEANGRG 89
+EA RG
Sbjct: 250 GEMEEAISRG 259
>gi|341879523|gb|EGT35458.1| CBN-HRPF-1 protein [Caenorhabditis brenneri]
Length = 569
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 79/186 (42%), Gaps = 30/186 (16%)
Query: 30 VNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRG 89
+ L + GR+ G+A V F++ DD RAL++ + ++G RYIE++ + + +
Sbjct: 30 IESLDIPKRNGRTCGDATVTFTNEDDYNRALKKDREHLGSRYIEVFPFDSAPRRRGD--- 86
Query: 90 TGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQG 149
+ R + S D A R G +RL+G
Sbjct: 87 -----------------RDDYRPRSFPPRDRYS--DRAGPRGGL--------DPIVRLRG 119
Query: 150 LPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIG 209
LP+ D+ F L IV +GI +P R G AY+ F E+ + A RH + IG
Sbjct: 120 LPFSVTIRDINDFFAPLPIVRDGILLPDQQRARPGGEAYVCFESMESMQIAKQRHMKNIG 179
Query: 210 HRLVTL 215
HR + +
Sbjct: 180 HRYIEV 185
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 21 SQFFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
+ FF P IV ILL R GEA V F S++ Q A QRH N+G RYIE++
Sbjct: 130 NDFFAPLPIVRDGILLPDQQRARPGGEAYVCFESMESMQIAKQRHMKNIGHRYIEVF 186
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 23 FFKPIVPVNILLLTD-DAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
FF PI P + L+ D R SG+A V F + D AL + K MG+RYIE+ + G
Sbjct: 510 FFHPIRPNQVELIRDYQFQRPSGDARVIFFNRKDYDDALMKDKQYMGERYIEMIPDNG 567
>gi|167535939|ref|XP_001749642.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771790|gb|EDQ85451.1| predicted protein [Monosiga brevicollis MX1]
Length = 948
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 46/197 (23%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+F P ++++L + GR G+A V + +DA+ AL+++K+ R +++ M GT+
Sbjct: 590 EFMAPAQVLDVMLECNPEGRCEGKACVLVCTPEDARLALEKNKTEFKGRSVDIEM--GTA 647
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
+ L KW + D L+ + D
Sbjct: 648 DTWND-------------------------LLKWYQ-------DQLLR---------STD 666
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENA---E 198
RL+GLP+ C ++DV FL+ I N + + H GR TG AY F + +
Sbjct: 667 TLVARLRGLPWSCSRDDVYDFLQPSGINANNVFVCHALNGRPTGTAYAVFSGSTASQCFD 726
Query: 199 KALLRHKEKIGHRLVTL 215
A+ +HK KIG R + +
Sbjct: 727 LAMRQHKSKIGDRYIEV 743
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 81/206 (39%), Gaps = 56/206 (27%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
G+ GEA S + AQ A R + +GDRYIE+++E T
Sbjct: 515 GKPIGEAYFIMGSPEAAQAAFARSGAMLGDRYIEVFVES------------------PQT 556
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
Y R A+ +A D + + GLP + K D+
Sbjct: 557 YY----------------------------RARALSKDAANDSQYLSVHGLPLDTTKHDL 588
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
E+F+ +++ + + + GRC G A + E+A AL ++K + R V + M
Sbjct: 589 EEFMAPAQVL--DVMLECNPEGRCEGKACVLVCTPEDARLALEKNKTEFKGRSVDIEMGT 646
Query: 220 A-------QWFLSPPL-TNETPISRL 237
A +W+ L + +T ++RL
Sbjct: 647 ADTWNDLLKWYQDQLLRSTDTLVARL 672
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK-ALLRHK 205
L+G+PYE + D++ ++ G IV + GR G A + +E A +RH
Sbjct: 875 LRGIPYEATEVDIDYWMTGTPIVAGMTRVLRKPNGRSQGDAVVYTATREGAGMIKAMRHN 934
Query: 206 EKIGHRLVTLVM 217
+ +GHR + ++M
Sbjct: 935 QMMGHRTIEVLM 946
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 7/124 (5%)
Query: 129 KRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAY 188
KR+ + + +RL+GL +E ++V LEGL++ + I ++ G+ G AY
Sbjct: 463 KRKKVKIDPDVLSSPVIRLRGLKWEWAAKEVLPMLEGLDVQADSGFICYNRQGKPIGEAY 522
Query: 189 IQFVDKENAEKALLRHKEKIGHRLVTLVMSGAQWF-----LSPPLTNETPISRLDLTGSP 243
E A+ A R +G R + + + Q + LS N++ L + G P
Sbjct: 523 FIMGSPEAAQAAFARSGAMLGDRYIEVFVESPQTYYRARALSKDAANDS--QYLSVHGLP 580
Query: 244 VRST 247
+ +T
Sbjct: 581 LDTT 584
>gi|195583688|ref|XP_002081648.1| GD25607 [Drosophila simulans]
gi|194193657|gb|EDX07233.1| GD25607 [Drosophila simulans]
Length = 628
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
C +R +GLP++ +D+ KF GL + G+ + GR G A I+FV +E+ + AL
Sbjct: 278 NCIVRARGLPWQSSDQDIAKFFRGLNVAKGGVALCLSPLGRRNGEALIRFVCQEHRDMAL 337
Query: 202 LRHKEKIGHRLVTLVMSGAQWFLS 225
RHK IG R + + + + FL+
Sbjct: 338 KRHKHHIGTRYIEVYRASGEDFLA 361
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
GR +GEA + F + AL+RHK ++G RYIE+Y G
Sbjct: 317 GRRNGEALIRFVCQEHRDMALKRHKHHIGTRYIEVYRASG 356
>gi|349804479|gb|AEQ17712.1| putative heterogeneous nuclear ribonucleoprotein h1 [Hymenochirus
curtipes]
Length = 154
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 35/47 (74%)
Query: 172 GITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
GIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 1 GITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKS 47
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 33/45 (73%)
Query: 31 NILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 1 GITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 45
>gi|224104153|ref|XP_002313339.1| predicted protein [Populus trichocarpa]
gi|222849747|gb|EEE87294.1| predicted protein [Populus trichocarpa]
Length = 253
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 91/202 (45%), Gaps = 26/202 (12%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
++FF + V++L + G+ SGEA ALQ+++ NMG RY+E++ +
Sbjct: 68 VAEFFHGLDIVDVLFVHK-GGKFSGEAFCVLGYPLQVDFALQKNRQNMGRRYVEVFRSK- 125
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA 139
+ Y +S+ R R++ + + A +G
Sbjct: 126 -----------------RQDYYKTIANEVSESRGSPRRNIPRAK-SYDEGKDSAEHTG-- 165
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
+RL+GLP+ K+D+ +F + + + I I + GR TG A+++F + E+++
Sbjct: 166 ----VLRLRGLPFSASKDDIMEFFKDFVLSEDSIHITMNSEGRPTGEAFVEFANAEDSKA 221
Query: 200 ALLRHKEKIGHRLVTLVMSGAQ 221
A+ + + +G R + L S +
Sbjct: 222 AMAKDRMTLGSRYIELFPSSVE 243
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 22 QFFKPIV--PVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
+FFK V +I + + GR +GEA VEF++ +D++ A+ + + +G RYIEL+
Sbjct: 183 EFFKDFVLSEDSIHITMNSEGRPTGEAFVEFANAEDSKAAMAKDRMTLGSRYIELFPSSV 242
Query: 80 TSSKEANGRG 89
S EA RG
Sbjct: 243 EESDEAVSRG 252
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP++C + DV +F GL+IV + H G+ +G A+ + AL +
Sbjct: 53 VVRLRGLPFDCTETDVAEFFHGLDIV--DVLFVHK-GGKFSGEAFCVLGYPLQVDFALQK 109
Query: 204 HKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVRS 246
+++ +G R V + S Q + + NE SR GSP R+
Sbjct: 110 NRQNMGRRYVEVFRSKRQDYYK-TIANEVSESR----GSPRRN 147
>gi|255544880|ref|XP_002513501.1| heterogeneous nuclear ribonucleoprotein, putative [Ricinus
communis]
gi|223547409|gb|EEF48904.1| heterogeneous nuclear ribonucleoprotein, putative [Ricinus
communis]
Length = 260
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 90/199 (45%), Gaps = 26/199 (13%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
++FF + V++L + G+ +GEA ALQ+++ NMG RY+E++ +
Sbjct: 75 VAEFFHGLDIVDVLFVHK-GGKFTGEAFCVLGCPLQVDFALQKNRQNMGRRYVEVFRSK- 132
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA 139
+ Y +S RRA R++ + + A +G
Sbjct: 133 -----------------RQDYYKAIANEVSDARGGSPRRAPRAK-SYDEGKDSAEHTG-- 172
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
+RL+GLP+ K+D+ +F + + + + I + GR TG A+++F E+++
Sbjct: 173 ----VLRLRGLPFSAGKDDIMEFFKDFVLSEDSVHITMNSEGRPTGEAFVEFASAEDSKA 228
Query: 200 ALLRHKEKIGHRLVTLVMS 218
A+ + + +G R + L S
Sbjct: 229 AMAKDRMTLGSRYIELFPS 247
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP++C + DV +F GL+IV + H G+ TG A+ + AL +
Sbjct: 60 VVRLRGLPFDCTETDVAEFFHGLDIV--DVLFVHK-GGKFTGEAFCVLGCPLQVDFALQK 116
Query: 204 HKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVRS 246
+++ +G R V + S Q + + NE +R GSP R+
Sbjct: 117 NRQNMGRRYVEVFRSKRQDYYK-AIANEVSDAR---GGSPRRA 155
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 22 QFFKPIV--PVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
+FFK V ++ + + GR +GEA VEF+S +D++ A+ + + +G RYIEL+
Sbjct: 190 EFFKDFVLSEDSVHITMNSEGRPTGEAFVEFASAEDSKAAMAKDRMTLGSRYIELFPSSI 249
Query: 80 TSSKEANGRG 89
+EA RG
Sbjct: 250 EELEEAVTRG 259
>gi|326918872|ref|XP_003205709.1| PREDICTED: g-rich sequence factor 1-like, partial [Meleagris
gallopavo]
Length = 343
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 82/188 (43%), Gaps = 49/188 (26%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + GR G+A +E S D Q+AL+++ MG RY++++ K+ +G
Sbjct: 55 IHFLLNRDGRRRGDALIELESKADVQKALEKNLRYMGTRYVKVHE---IHDKDVDG---- 107
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+ +L+ + V+S V L+GLP
Sbjct: 108 --------------------------------LLQSLRYESQVMSDGVV-----LLRGLP 130
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAG-RCTGVAYIQFVDKENAEKALLRHKEKIGH 210
++ ++D+ F GL I I Y G R TG AY+QF E KALLRHKE + +
Sbjct: 131 FDSTEDDIADFFAGLRIT----DITFVYRGERKTGEAYVQFAAPEMVAKALLRHKEYMEN 186
Query: 211 RLVTLVMS 218
R + + +S
Sbjct: 187 RYIEVYIS 194
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
FF P+ P IL+ + G ++GEADV F S DDA A+ + ++ + +E++++E
Sbjct: 280 FFAPLRPRRILIEYNSDGVATGEADVHFESYDDAVTAMAKERAQLQFGAVEVFLKE 335
>gi|156402343|ref|XP_001639550.1| predicted protein [Nematostella vectensis]
gi|156226679|gb|EDO47487.1| predicted protein [Nematostella vectensis]
Length = 862
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 33/182 (18%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF P+ PV I + + G+ SG A V+FSS D ++AL+R+K + RYIEL+ + +
Sbjct: 271 EFFSPLKPVAIRFVMNKKGQPSGCAFVDFSSKSDLEKALKRNKDYLQGRYIELFKD---T 327
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
+++ + G G KS WMR+ L+ +G +
Sbjct: 328 NRDFDNNKQG--DGEKS----------------WMRK---------LQEKGDDEEEEPIG 360
Query: 142 QCC-MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHD-YAGRCTGVAYIQFVDKENAEK 199
+ + L+ L Y C +ED++ E + + +P D + + G+ ++ F+ E+A K
Sbjct: 361 ESGRLFLRNLAYSCSEEDIQHLFEKFGPLSE-VNLPLDKHTNKTIGIGFVTFLMPEHAVK 419
Query: 200 AL 201
A
Sbjct: 420 AF 421
Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
C MR GLP++ K + + +F L+ P I + G+ +G A++ F K + EKAL
Sbjct: 255 CKMR--GLPFKAKDKHILEFFSPLK--PVAIRFVMNKKGQPSGCAFVDFSSKSDLEKALK 310
Query: 203 RHKEKIGHRLVTLVMSGAQWF 223
R+K+ + R + L + F
Sbjct: 311 RNKDYLQGRYIELFKDTNRDF 331
>gi|324527735|gb|ADY48838.1| Heterogeneous nuclear ribonucleoprotein F, partial [Ascaris suum]
Length = 166
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 19/138 (13%)
Query: 122 SEMDWALKRQGAVLSGSA-------VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGIT 174
SE+ W + R G + S + + +RL+G+P+ D+++F GL++ +
Sbjct: 14 SEVSWMI-RHGVIKSADSNGTSTGTSNNYVVRLRGIPFSATVADIKEFFSGLDVA--DVV 70
Query: 175 IPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGAQWF---------LS 225
I + GR +G A+++ KE+AE AL R K +G R V + S + +
Sbjct: 71 IDKEQGGRPSGEAFVRLASKEHAELALERSKNNMGSRYVEVFRSSGEEMDNSFYTSRGIP 130
Query: 226 PPLTNETPISRLDLTGSP 243
PP+ P+ L P
Sbjct: 131 PPMAGPIPLRGLSPASDP 148
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
+FF + ++++ + GR SGEA V +S + A+ AL+R K+NMG RY+E++ G
Sbjct: 59 EFFSGLDVADVVIDKEQGGRPSGEAFVRLASKEHAELALERSKNNMGSRYVEVFRSSG 116
>gi|118090272|ref|XP_420600.2| PREDICTED: G-rich sequence factor 1 [Gallus gallus]
Length = 410
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 81/188 (43%), Gaps = 49/188 (26%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + GR G+A +E S D Q+AL+++ MG RY++++ K+ +G
Sbjct: 122 IHFLLNRDGRRRGDALIELESKADVQKALEKNLRYMGTRYVKVHE---IHDKDVDG---- 174
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+ +L+ + V+S V L+GLP
Sbjct: 175 --------------------------------LLQSLRYESEVMSDGVV-----LLRGLP 197
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAG-RCTGVAYIQFVDKENAEKALLRHKEKIGH 210
++ ++D+ F GL I Y G R TG AY+QF E KALLRHKE + +
Sbjct: 198 FDSTEDDIADFFAGLRITDMTFV----YRGERKTGEAYVQFAAPEMVAKALLRHKEYMEN 253
Query: 211 RLVTLVMS 218
R + + +S
Sbjct: 254 RYIEVYIS 261
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
FF P+ P IL+ + G ++GEADV F S DDA A+ + ++ + +E++++E
Sbjct: 347 FFAPLKPTRILIEYNSDGVATGEADVHFESYDDAVAAMAKERAQLQFGTVEVFLKE 402
>gi|340386110|ref|XP_003391551.1| PREDICTED: epithelial splicing regulatory protein 1-like, partial
[Amphimedon queenslandica]
Length = 541
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 50/201 (24%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEAN 86
I+P ++ + GR +GEA V D AQ ALQR + + RY+E+Y
Sbjct: 197 IIPGGVVFSINPVGRRTGEAIVVLEGEDQAQFALQRDRHYLHQRYVEVY----------- 245
Query: 87 GRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMR 146
+++P FC + +GS+ +R
Sbjct: 246 ----------EASPDNFFQFCDT--------------------------TGSSEKVFTVR 269
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPN---GITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+QGLPY + D+ +F + V N GI I G+ +G A+ F + + E+AL +
Sbjct: 270 MQGLPYRATESDIMEFFQPEAPVSNEADGILIVRYPDGKASGDAFAVFSSEAHVEEALKK 329
Query: 204 HKEKIGHRLVTLVMSGAQWFL 224
H+ + R + + S + FL
Sbjct: 330 HRNNLMGRYIEVFHSSLKEFL 350
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 27/206 (13%)
Query: 22 QFFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
+FF+P PV+ IL++ G++SG+A FSS + AL++H++N+ RYIE++
Sbjct: 284 EFFQPEAPVSNEADGILIVRYPDGKASGDAFAVFSSEAHVEEALKKHRNNLMGRYIEVFH 343
Query: 77 EEGTSSKE----ANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQG 132
+S KE N GT P + F +L G
Sbjct: 344 ---SSLKEFLVVLNKSGT---------PEQLDRFA---YLNTESGGGGGGGRGGGGGSGG 388
Query: 133 AVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLE--IVPNGITIPHDYAGRCTGVAYIQ 190
++ C++L+GLP+E EDV F L I GI + + R TG ++Q
Sbjct: 389 GASKRGGSEKNCVKLRGLPWEATPEDVISFFGDLNRSIEQQGIHMVLNAQSRPTGDCFVQ 448
Query: 191 FVDKENAEKALLR-HKEKIGHRLVTL 215
+ A +A H++ IG R + +
Sbjct: 449 MTSVDAATRAANELHRQNIGRRYIEV 474
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D C +RL+GLP+ D+ FL GL I+P G+ + GR TG A + ++ A+ A
Sbjct: 170 DGCVVRLRGLPFSADHNDIALFLSGLNIIPGGVVFSINPVGRRTGEAIVVLEGEDQAQFA 229
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L R + + R V + + F
Sbjct: 230 LQRDRHYLHQRYVEVYEASPDNFF 253
>gi|350592780|ref|XP_003483535.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like [Sus
scrofa]
Length = 161
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 18 LLCSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
LL QFF P+ P+ + + GR++GEADVEF + +DA A+ + K+NM RYIEL++
Sbjct: 24 LLLQQFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIELFLN 83
>gi|358253640|dbj|GAA53549.1| epithelial splicing regulatory protein 1 [Clonorchis sinensis]
Length = 1176
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 53/185 (28%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 35 LTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFG 94
LTD GR S A V F+S +AQ AL RH+ L+ E +++ R G
Sbjct: 413 LTD--GRRSNTAIVAFTSSLNAQLALARHQHQFCG---ALFPESPQDTQQGVDRA-GTKD 466
Query: 95 GVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYEC 154
TP + A+ + + + + +G +Q +R++GLP+
Sbjct: 467 KQAQTPTKPSTLQVYSASAREFIQCAGCDQPLVSEFLSQLTNG---EQVVVRVRGLPFTA 523
Query: 155 KKEDVEKFLEGLE----IVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGH 210
K+ + F + +E + NGI + GR TG A++ F D + A +ALLRHK+ +G
Sbjct: 524 TKQQILDFFKAVEAPVLLEANGIYLVAYPEGRPTGDAFVLFSDDKTATRALLRHKDYLGD 583
Query: 211 RLVTL 215
R V L
Sbjct: 584 RYVEL 588
Score = 45.8 bits (107), Expect = 0.025, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 23 FFKPI-VPV-----NILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
FFK + PV I L+ GR +G+A V FS A RAL RHK +GDRY+EL+
Sbjct: 531 FFKAVEAPVLLEANGIYLVAYPEGRPTGDAFVLFSDDKTATRALLRHKDYLGDRYVELF 589
Score = 39.7 bits (91), Expect = 1.5, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D C + ++ +P+ + F GL ++P G+ I GR + A + F NA+ A
Sbjct: 377 DSCVVEVRQVPWSATPSIIAGFFTGLNLIPGGVAI-RLTDGRRSNTAIVAFTSSLNAQLA 435
Query: 201 LLRHKEK 207
L RH+ +
Sbjct: 436 LARHQHQ 442
>gi|340372253|ref|XP_003384659.1| PREDICTED: epithelial splicing regulatory protein 1-like
[Amphimedon queenslandica]
Length = 848
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 50/201 (24%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEAN 86
I+P ++ + GR +GEA V D AQ ALQR + + RY+E+Y
Sbjct: 237 IIPGGVVFSINPVGRRTGEAIVVLEGEDQAQFALQRDRHYLHQRYVEVY----------- 285
Query: 87 GRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMR 146
+++P FC + +GS+ +R
Sbjct: 286 ----------EASPDNFFQFCDT--------------------------TGSSEKVFTVR 309
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPN---GITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+QGLPY + D+ +F + V N GI I G+ +G A+ F + + E+AL +
Sbjct: 310 MQGLPYRATESDIMEFFQPEAPVSNEADGILIVRYPDGKASGDAFAVFSSEAHVEEALKK 369
Query: 204 HKEKIGHRLVTLVMSGAQWFL 224
H+ + R + + S + FL
Sbjct: 370 HRNNLMGRYIEVFHSSLKEFL 390
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 39/204 (19%)
Query: 22 QFFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
+FF+P PV+ IL++ G++SG+A FSS + AL++H++N+ RYIE++
Sbjct: 324 EFFQPEAPVSNEADGILIVRYPDGKASGDAFAVFSSEAHVEEALKKHRNNLMGRYIEVFH 383
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMD--WALKRQGAV 134
+ +FL + ++D G
Sbjct: 384 S-----------------------------SLKEFLVVLNKSGTPEQLDRGGGGGGSGGA 414
Query: 135 LSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLE--IVPNGITIPHDYAGRCTGVAYIQFV 192
++ C++L+GLP+E EDV F L I GI + + R TG ++Q
Sbjct: 415 SKRGGSEKNCVKLRGLPWEATPEDVISFFGDLNRSIEQQGIHMVLNAQSRPTGDCFVQMT 474
Query: 193 DKENAEKALLR-HKEKIGHRLVTL 215
+ A +A H++ IG R + +
Sbjct: 475 SVDAATRAANELHRQNIGRRYIEV 498
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D C +RL+GLP+ D+ FL GL I+P G+ + GR TG A + ++ A+ A
Sbjct: 210 DGCVVRLRGLPFSADHNDIALFLSGLNIIPGGVVFSINPVGRRTGEAIVVLEGEDQAQFA 269
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L R + + R V + + F
Sbjct: 270 LQRDRHYLHQRYVEVYEASPDNFF 293
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 31/182 (17%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELYMEEGTSSKEANGRGT 90
I ++ + R +G+ V+ +SVD A RA H+ N+G RYIE++ G A
Sbjct: 455 IHMVLNAQSRPTGDCFVQMTSVDAATRAANELHRQNIGRRYIEVFQVSGNDVTYA----- 509
Query: 91 GGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGL 150
+ ++ KR+ V ++ +GL
Sbjct: 510 ---------------LMDTGGGSRPGGGHAYYGGGGGNKRK-------KVSSAVVKARGL 547
Query: 151 PYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL--LRHKEKI 208
P+ K+ D+ F + + I + +++ GR TGVAYI F +A +A+ L HK I
Sbjct: 548 PFNTKEYDLVDFFADFNVDESDIELIYNHNGRSTGVAYINFQSLNDARQAVRDLNHK-YI 606
Query: 209 GH 210
GH
Sbjct: 607 GH 608
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 90/189 (47%), Gaps = 24/189 (12%)
Query: 31 NILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGT 90
+I L+ + GRS+G A + F S++DA++A++ ++ +YI G + R
Sbjct: 569 DIELIYNHNGRSTGVAYINFQSLNDARQAVR----DLNHKYI------GHHKPSSLKR-- 616
Query: 91 GGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGL 150
V S+P V + + F + ++R + +V G V Q C+ L+G+
Sbjct: 617 -----VSSSP--VSNYRLVNFSNRGLKRDCSTATPSGEAEGESVNQG--VIQNCLLLKGI 667
Query: 151 PYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL-LRHKEK 207
P+E + V F L IV +GI + +D G+ TG + D + + A+ + ++
Sbjct: 668 PWETTVDKVTAFFGDLSSNIVEDGIHLLYDKFGQSTGQCIVHMTDAASVQNAVGMLNRHY 727
Query: 208 IGHRLVTLV 216
+G+R V L+
Sbjct: 728 LGNRYVDLI 736
>gi|294461466|gb|ADE76294.1| unknown [Picea sitchensis]
Length = 262
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 83/201 (41%), Gaps = 33/201 (16%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF + V++LL+ GR SGE V F + ALQR + NMG RYIE++
Sbjct: 77 EFFAGLDVVDVLLVHK-QGRFSGEGFVVFGAPMQVDFALQRDRQNMGRRYIEVFR----- 130
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
K Y I A + K D A G S D
Sbjct: 131 --------------CKKQDYYNAI-------AAEVNEPKGG--DDAAPPSGYSKGSSDKD 167
Query: 142 QC----CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENA 197
++L+GLP+ K D+ +F ++ + I GR TG A+++F + ++
Sbjct: 168 HMEHTGILKLRGLPFSVSKRDIIEFFTDYDLSETNVHIVSHSDGRATGEAFVEFSNDTDS 227
Query: 198 EKALLRHKEKIGHRLVTLVMS 218
+ A+ + K IG R V L S
Sbjct: 228 KAAMSKDKMMIGTRYVELFPS 248
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP+ C DV +F GL++V + + H GR +G ++ F + AL R
Sbjct: 60 VVRLRGLPFNCSDNDVCEFFAGLDVVD--VLLVHK-QGRFSGEGFVVFGAPMQVDFALQR 116
Query: 204 HKEKIGHRLVTL 215
++ +G R + +
Sbjct: 117 DRQNMGRRYIEV 128
>gi|268529124|ref|XP_002629688.1| C. briggsae CBR-SYM-2 protein [Caenorhabditis briggsae]
Length = 613
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Query: 121 RSEM-DWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDY 179
R+E+ + L + + + +R++GLPY+C + F E L++ + I
Sbjct: 249 RTEIYHYHLGSSAEAMDFVSANAVIVRMRGLPYDCTDTQIRAFFEPLKLTEKILFITRT- 307
Query: 180 AGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGA 220
GR TG A++QF +E+A++ LL+H++ IG R + L S A
Sbjct: 308 DGRPTGCAFVQFETEEDAQQGLLKHRQVIGQRYIELFKSTA 348
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 81/179 (45%), Gaps = 37/179 (20%)
Query: 23 FFKPI-VPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF+P+ + IL +T GR +G A V+F + +DAQ+ L +H+ +G RYIEL+
Sbjct: 291 FFEPLKLTEKILFITRTDGRPTGCAFVQFETEEDAQQGLLKHRQVIGQRYIELF------ 344
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEM-DWALKRQGAVLSGSAV 140
KST A+ + KR + + A AV
Sbjct: 345 ---------------KSTA------------AEVQQVVKRCNLINSAPVVANAVEVSDEK 377
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLE--IVPNGITIPHDYAGRCTGVAYIQFVDKENA 197
+ C+RL+GLPYE + + FL + G+ + ++ G +G A+IQ + ++ A
Sbjct: 378 KKDCVRLRGLPYEATVQHIVNFLGDFANMVKFQGVHMVYNNQGNPSGEAFIQMISEQAA 436
>gi|294460097|gb|ADE75631.1| unknown [Picea sitchensis]
Length = 256
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 83/201 (41%), Gaps = 33/201 (16%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF + V++LL+ GR SGE V F + ALQR + NMG RYIE++
Sbjct: 71 EFFAGLDVVDVLLVHK-QGRFSGEGFVVFGAPMQVDFALQRDRQNMGRRYIEVFR----- 124
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
K Y I A + K D A G S D
Sbjct: 125 --------------CKKQDYYNAI-------AAEVNEPKGG--DDAAPPSGYSKGSSDKD 161
Query: 142 QC----CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENA 197
++L+GLP+ K D+ +F ++ + I GR TG A+++F + ++
Sbjct: 162 HMEHTGILKLRGLPFSVSKRDIIEFFTDYDLSETNVHIVSHSDGRATGEAFVEFSNDTDS 221
Query: 198 EKALLRHKEKIGHRLVTLVMS 218
+ A+ + K IG R V L S
Sbjct: 222 KAAMSKDKMMIGTRYVELFPS 242
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP+ C DV +F GL++V + + H GR +G ++ F + AL R
Sbjct: 54 VVRLRGLPFNCSDNDVCEFFAGLDVVD--VLLVHK-QGRFSGEGFVVFGAPMQVDFALQR 110
Query: 204 HKEKIGHRLVTL 215
++ +G R + +
Sbjct: 111 DRQNMGRRYIEV 122
>gi|224059562|ref|XP_002299908.1| predicted protein [Populus trichocarpa]
gi|222847166|gb|EEE84713.1| predicted protein [Populus trichocarpa]
Length = 253
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 38/205 (18%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE- 78
++FF+ + V++L + G+ +GEA ALQ+++ NMG RY+E++ +
Sbjct: 68 VAEFFRGLDIVDVLFVHK-GGKFTGEAFCVLGYPLQVDFALQKNRQNMGRRYVEVFRSKR 126
Query: 79 -----GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGA 133
+++ + RG+ + + RAK + L
Sbjct: 127 QDYYKAIANEVSESRGS---------------------PRRNISRAKSYDEGKDLAEHTG 165
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVD 193
VL RL+GLP+ K+D+ +F + + + I I + GR TG A+++F +
Sbjct: 166 VL----------RLRGLPFSAGKDDIMEFFKDFVLSEDLIHITMNSEGRPTGEAFVEFAN 215
Query: 194 KENAEKALLRHKEKIGHRLVTLVMS 218
E+++ A+ + + +G R + L S
Sbjct: 216 AEDSKAAMAKDRMTLGSRYIELFPS 240
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP++C + DV +F GL+IV + H G+ TG A+ + AL +
Sbjct: 53 VVRLRGLPFDCTETDVAEFFRGLDIV--DVLFVHK-GGKFTGEAFCVLGYPLQVDFALQK 109
Query: 204 HKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVRS 246
+++ +G R V + S Q + + NE SR GSP R+
Sbjct: 110 NRQNMGRRYVEVFRSKRQDYYK-AIANEVSESR----GSPRRN 147
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 22 QFFKPIVPVNILL--LTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
+FFK V L+ + GR +GEA VEF++ +D++ A+ + + +G RYIEL+
Sbjct: 183 EFFKDFVLSEDLIHITMNSEGRPTGEAFVEFANAEDSKAAMAKDRMTLGSRYIELFPSSI 242
Query: 80 TSSKEANGRG 89
EA RG
Sbjct: 243 EELDEAVSRG 252
>gi|74214262|dbj|BAE40375.1| unnamed protein product [Mus musculus]
Length = 512
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
++ +R +GLP++ +DV +F +GL I G+ + + GR G A I+FVD E + A
Sbjct: 245 NETVVRARGLPWQSSDQDVARFFKGLNIARGGVALCLNAQGRRNGEALIRFVDSEQRDLA 304
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + F+
Sbjct: 305 LQRHKHHMGVRYIEVYKATGEEFV 328
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 6/63 (9%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYM 76
++FFK I + L + GR +GEA + F VD QR ALQRHK +MG RYIE+Y
Sbjct: 264 ARFFKGLNIARGGVALCLNAQGRRNGEALIRF--VDSEQRDLALQRHKHHMGVRYIEVYK 321
Query: 77 EEG 79
G
Sbjct: 322 ATG 324
>gi|302850710|ref|XP_002956881.1| hypothetical protein VOLCADRAFT_121578 [Volvox carteri f.
nagariensis]
gi|300257762|gb|EFJ42006.1| hypothetical protein VOLCADRAFT_121578 [Volvox carteri f.
nagariensis]
Length = 628
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 95/251 (37%), Gaps = 70/251 (27%)
Query: 29 PVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMG----DRYIELY--------- 75
P + L GR +GEA V F D+A+RA Q+ + G DRY+ +Y
Sbjct: 55 PDQVFLRKHPDGRPNGEAFVVFEDSDEARRATQKDRETFGEKFGDRYVRVYPTLDSDIPD 114
Query: 76 ----MEEGTSSKEANGRGTGGFGG-------VKSTPYGVGIFCISQFLAKWMRR------ 118
+ + ++A G G G G +KS P+ I QF + +
Sbjct: 115 MQAAVAQAQLHEQAQGSGNHGHGAHSDSVVKIKSLPFDATQLDIIQFFENFKLKPNGVQL 174
Query: 119 ---------------------AKRS--EMDWAL-----------------KRQGAVLSGS 138
A RS E D + K A L+
Sbjct: 175 VVRSDNKPTGEAFVDFETPEEAARSIKEKDHKVFSEKFGDRYVRLIQVSRKEMQATLALR 234
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAE 198
+ ++++G+P++ DV KF G ++ G++ GR TG+A+I+F + A
Sbjct: 235 FGGEGVLKMKGIPFKATAVDVRKFFTGYKVKTEGVSFIMHADGRPTGMAFIEFETPQEAV 294
Query: 199 KALLRHKEKIG 209
+A+ + + K G
Sbjct: 295 RAMEKDRAKFG 305
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D ++++GLP++ KED+ KF G + P+ + + GR G A++ F D + A +A
Sbjct: 26 DGSVVKMKGLPFKGGKEDIIKFFAGFTVRPDQVFLRKHPDGRPNGEAFVVFEDSDEARRA 85
Query: 201 LLRHKEKIGHRL 212
+ +E G +
Sbjct: 86 TQKDRETFGEKF 97
>gi|302789778|ref|XP_002976657.1| hypothetical protein SELMODRAFT_416554 [Selaginella moellendorffii]
gi|300155695|gb|EFJ22326.1| hypothetical protein SELMODRAFT_416554 [Selaginella moellendorffii]
Length = 287
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 17/203 (8%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--- 78
+FF + V++LL+ GR SGEA V + ALQR++ NMG RY+E++ +
Sbjct: 83 EFFAGLDVVDVLLVRKQ-GRFSGEAFVVLGAPMQVDFALQRNRQNMGRRYVEVFRSKKQD 141
Query: 79 --GTSSKEANGRGTGG-FGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVL 135
+ E N +G + S+ G G K S D L VL
Sbjct: 142 YYSAVATEVNDPRSGDVLATLASSAAGGGGGGGGGGGGGGGGSGKNSLCDKDLAEHTGVL 201
Query: 136 SGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+L+GLP+ K D+ +F + + + I GR TG AY+ F+
Sbjct: 202 ----------KLRGLPFSASKRDIVEFFREFGLKEDSVQIVVHSDGRATGEAYVFFLGPG 251
Query: 196 NAEKALLRHKEKIGHRLVTLVMS 218
+++ A+ + K +G+R V L S
Sbjct: 252 DSKAAMNKDKMTLGNRYVELFPS 274
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP+ C + DV +F GL++V + GR +G A++ + AL R
Sbjct: 66 VVRLRGLPFNCSESDVFEFFAGLDVVDVLLVRKQ---GRFSGEAFVVLGAPMQVDFALQR 122
Query: 204 HKEKIGHRLVTLVMSGAQWFLSPPLT 229
+++ +G R V + S Q + S T
Sbjct: 123 NRQNMGRRYVEVFRSKKQDYYSAVAT 148
>gi|339245667|ref|XP_003374467.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316972254|gb|EFV55937.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 370
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 39/58 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
+FF PI +N+ +L D+ R +GEADVEF DA AL++ + MG+RYIEL++ G
Sbjct: 221 EFFYPIKIMNVRILFDERNRPTGEADVEFQCESDALEALKKDRKTMGERYIELFINTG 278
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 27/208 (12%)
Query: 31 NILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY---MEE----GTSSK 83
+I D++GR+SGE V FS+ + +RAL RH +G RYIE++ MEE +
Sbjct: 76 DIRFGQDNSGRASGEGFVRFSNKEATERALDRHMEKIGHRYIEVFRSSMEEMDRVTRRPQ 135
Query: 84 EANGRGTGGF-------GGVKSTPY---GVGIFCISQFLAKWMRRAKRSEMDWALKRQGA 133
G G GG G + Y G G F + D QGA
Sbjct: 136 HMAGWGDGGGRIVDHDRGYYDTAGYRGGGPGSMYNDDFFTSSPINPRGGYYD-----QGA 190
Query: 134 VLSGSAVDQC---CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
G + + ++GLPY+ D+ +F ++I+ + I D R TG A ++
Sbjct: 191 SFGGRMGGRGAGFALHMRGLPYKATANDIMEFFYPIKIM--NVRILFDERNRPTGEADVE 248
Query: 191 FVDKENAEKALLRHKEKIGHRLVTLVMS 218
F + +A +AL + ++ +G R + L ++
Sbjct: 249 FQCESDALEALKKDRKTMGERYIELFIN 276
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 39/119 (32%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLE------GLEIV------PNG----------------- 172
+ +R++GLP+ K+ED+ KF G+ P+G
Sbjct: 7 EHVVRVRGLPWSSKEEDIRKFFHDCSDIIGIHFTYSKEGRPSGEAYLEFGSADDVDKALR 66
Query: 173 ----------ITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGAQ 221
I D +GR +G +++F +KE E+AL RH EKIGHR + + S +
Sbjct: 67 HHHISDSIDDIRFGQDNSGRASGEGFVRFSNKEATERALDRHMEKIGHRYIEVFRSSME 125
>gi|344290717|ref|XP_003417084.1| PREDICTED: LOW QUALITY PROTEIN: epithelial splicing regulatory
protein 2-like [Loxodonta africana]
Length = 717
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +DV +F +GL I G+ + + GR G A I+FVD E + AL
Sbjct: 246 ETVIRARGLPWQSSDQDVARFFKGLNIARGGVALCLNAQGRRNGEALIRFVDSEQRDLAL 305
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + F+
Sbjct: 306 QRHKHHMGIRYIEVYKATGEEFV 328
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 86/203 (42%), Gaps = 37/203 (18%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+ + +G RYIEL+
Sbjct: 367 FLGPECPVTGGADGLLFVRHPDGRPTGDAFALFACEELAQAALRSXQGMLGKRYIELFRS 426
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKR-QGAVLS 136
+ Q L ++ + + L +++
Sbjct: 427 TAAE--------------------------VQQILNRYASSSLLPTLTAPLLPIPFPLVA 460
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDK 194
G+ D C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ
Sbjct: 461 GTGRD--CVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSA 518
Query: 195 ENAEKALLR-HKEKIGHRLVTLV 216
E A A R HK+ + R V +V
Sbjct: 519 ERALAAAQRCHKKVMKERYVEVV 541
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 87/208 (41%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYM 76
++FFK I + L + GR +GEA + F VD QR ALQRHK +MG RYIE+Y
Sbjct: 264 ARFFKGLNIARGGVALCLNAQGRRNGEALIRF--VDSEQRDLALQRHKHHMGIRYIEVYK 321
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
G + G GT + +FL++
Sbjct: 322 ATGEEFVKIAG-GTS--------------LEVVRFLSRE--------------------- 345
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFV 192
DQ +RL+GLP+ DV FL G E +G+ GR TG A+ F
Sbjct: 346 ----DQVILRLRGLPFSAGPADVLAFL-GPECPVTGGADGLLFVRHPDGRPTGDAFALFA 400
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL + +G R + L S A
Sbjct: 401 CEELAQAALRSXQGMLGKRYIELFRSTA 428
>gi|358248784|ref|NP_001239939.1| uncharacterized protein LOC100805177 [Glycine max]
gi|255644706|gb|ACU22855.1| unknown [Glycine max]
Length = 261
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 87/199 (43%), Gaps = 25/199 (12%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
++FF + V++L + G+ +GE ALQR++ NMG RY+E++ +
Sbjct: 75 VAEFFHGLDIVDVLFVHK-GGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEVFRSK- 132
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA 139
+ Y +S RR+ + ++ A +G
Sbjct: 133 -----------------RQEYYKAIANEVSDARGGSPRRSASRAKSYDEGKESAEHTG-- 173
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
+RL+GLP+ K+D+ +F + + + I I + GR +G AY +F E+++
Sbjct: 174 ----VLRLRGLPFSASKDDIMEFFKDFGLPEDSIHIIMNSEGRPSGEAYAEFESAEDSKA 229
Query: 200 ALLRHKEKIGHRLVTLVMS 218
A+++ + +G R + L S
Sbjct: 230 AMIKDRMTLGSRYIELFPS 248
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP++C + DV +F GL+IV + H G+ TG + + AL R
Sbjct: 60 VVRLRGLPFDCTETDVAEFFHGLDIVD--VLFVHK-GGKFTGEGFCVLGYPLQVDFALQR 116
Query: 204 HKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVRST 247
+++ +G R V + S Q + + NE +R GSP RS
Sbjct: 117 NRQNMGRRYVEVFRSKRQEYYK-AIANEVSDAR---GGSPRRSA 156
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 22 QFFKPI-VPVN-ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
+FFK +P + I ++ + GR SGEA EF S +D++ A+ + + +G RYIEL+
Sbjct: 191 EFFKDFGLPEDSIHIIMNSEGRPSGEAYAEFESAEDSKAAMIKDRMTLGSRYIELFPSSH 250
Query: 80 TSSKEANGRG 89
+EA RG
Sbjct: 251 GEMEEAISRG 260
>gi|339253438|ref|XP_003371942.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316967723|gb|EFV52113.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 505
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I+ + GR++G+A V +S +DAQ+AL +HK +G RYIEL+ ++ +
Sbjct: 86 IMFVNKADGRATGDAFVLIASEEDAQKALSKHKEVIGSRYIELFRSTSAEVQQVINK--- 142
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAK-----RSEMDWALKRQGAVLSGSAVDQCCMR 146
++ + L R ++ L Q A ++G D C+R
Sbjct: 143 ---SLEVAKIDLNTMPTVGLLGSLPPRGAIPTPVPGQIQPILPPQ-AFITGCRKD--CVR 196
Query: 147 LQGLPYECKKEDVEKFLEGLE--IVPNGITIPHDYAGRCTGVAYIQF 191
L+GLPYE + + + +FL IV G+ + ++ G +G A+IQ
Sbjct: 197 LRGLPYEAEVQHILEFLGEFSKHIVLQGVHMVYNAQGNPSGEAFIQM 243
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 67/127 (52%), Gaps = 11/127 (8%)
Query: 145 MRLQGLPYECKKEDVEKFLE----GLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAE 198
+R++GLPY+C + + +F E G+++ +GI + GR TG A++ +E+A+
Sbjct: 52 IRMRGLPYDCTAKRIMEFFESGENGVKVAGGESGIMFVNKADGRATGDAFVLIASEEDAQ 111
Query: 199 KALLRHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVRSTICVLCHPLTPR 258
KAL +HKE IG R + L S + + + ++++DL P T+ +L L PR
Sbjct: 112 KALSKHKEVIGSRYIELFRSTSAE-VQQVINKSLEVAKIDLNTMP---TVGLLGS-LPPR 166
Query: 259 SVRPRSV 265
P V
Sbjct: 167 GAIPTPV 173
>gi|167517425|ref|XP_001743053.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778152|gb|EDQ91767.1| predicted protein [Monosiga brevicollis MX1]
Length = 1117
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 39/52 (75%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIEL 74
FFKP+ P+++ LL D RSSG A V+F++ + ++AL++HKS MG RYIE+
Sbjct: 447 FFKPLKPIDVRLLFDKRKRSSGRAFVDFATKPEWKKALEKHKSKMGKRYIEV 498
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+R+ GLP++ ++ ++ F + L+ P + + D R +G A++ F K +KAL +
Sbjct: 429 TVRVLGLPFKAREPEIVGFFKPLK--PIDVRLLFDKRKRSSGRAFVDFATKPEWKKALEK 486
Query: 204 HKEKIGHRLVTLVMS 218
HK K+G R + + +
Sbjct: 487 HKSKMGKRYIEVTAA 501
>gi|194389894|dbj|BAG60463.1| unnamed protein product [Homo sapiens]
Length = 159
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 37 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLNSTAG 96
Query: 80 TSSKEANGRGTGGFGGVKSTPYG 102
S + + GG G + YG
Sbjct: 97 ASGGAYSSQMLGGMGLSNQSSYG 119
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 20 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 77
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 78 DKANMQHRYVELFLN 92
>gi|432909266|ref|XP_004078148.1| PREDICTED: RNA-binding protein 12B-like [Oryzias latipes]
Length = 631
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 110/240 (45%), Gaps = 21/240 (8%)
Query: 3 FSFYVIDILIHITYCLLCSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQR 62
F ++ + +T +C +FFK + I+LL + G+++G+A V F + +DA AL++
Sbjct: 132 FVVFLNGLPFSVTENQIC-EFFKGLETNEIVLLKNHRGQNNGKAFVRFVTREDAMEALKK 190
Query: 63 HKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRS 122
+ +G RY+E+ A GR G + G + Q ++ R RS
Sbjct: 191 NMEYIGTRYVEVCTTTINEWYRATGRMPMGLNVDDNFERG-RMPDHRQRISPHTR--SRS 247
Query: 123 EMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGR 182
M ++R ++ ++ C+ L L Y +KED+++ G+++ + I D AG+
Sbjct: 248 PM---MQRHAP----ASEEEYCVLLDNLSYGMEKEDIKQMFRGVKLDNDQILHLTDPAGK 300
Query: 183 CTGVAYIQFVDKENAEKALLRHKEKIGHRLVTL----------VMSGAQWFLSPPLTNET 232
T A++ F + +A+ K+ + +R V + ++ + PP N++
Sbjct: 301 RTRSAFVLFKSFHDYNRAISNEKKLLYNRWVNIRPISRENMLALLQSQNTAIGPPENNQS 360
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 121 RSEMDWALKRQGAVLSGSAVDQ----CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIP 176
R DW G+ GS V C++L LP++ K E++ F G I+P +++
Sbjct: 531 RPPRDWGNGDHGSF--GSPVQHFDGPTCVQLVNLPFQIKSEEIYDFCYGYHIIPGSVSLQ 588
Query: 177 HDYAGRCTGVAYIQFVDKENAEKALLR-HKEKIGHRLVTLVM 217
+D +G G A + F ++ A AL + IG R + L++
Sbjct: 589 YDQSGNPKGSATLVFESRQEALTALRELNGRPIGPRKIELIL 630
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQGL ED+ KF GL+I G+ I G A+I F E+A +A+
Sbjct: 3 VVIRLQGLKVTAGSEDIRKFFTGLKIPDGGVHI----IGGDHEEAFIIFASDEDARRAMT 58
Query: 203 RHKEKIGHRLVTLVMS 218
R +I VTL++S
Sbjct: 59 RSGGQIKGSPVTLLLS 74
>gi|410905475|ref|XP_003966217.1| PREDICTED: RNA-binding protein 12B-B-like [Takifugu rubripes]
Length = 627
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 97/224 (43%), Gaps = 27/224 (12%)
Query: 21 SQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
S FF ++ I+LL + G ++G V+F S DD AL+RH+ +G RY+E+
Sbjct: 155 SNFFDGLLIDGIVLLKNGHGSNTGNGLVKFRSSDDTYEALKRHRQYIGARYVEV------ 208
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVL---SG 137
S AN + S P V + Q + R R++ + +R + L S
Sbjct: 209 SKSTAN----YWYQHAGSLPEMVDM----QANVERDRSPLRNDRNLHQQRAPSPLAQRSN 260
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENA 197
A D+ C+ L+ L Y +KED+ + + + I GR T +++ F + +
Sbjct: 261 PADDEYCVLLENLSYTAEKEDIRNLFQNANLQNDQILHLVSSDGRRTRSSFVLFKNLHDY 320
Query: 198 EKALLRHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTG 241
+AL K +R W + P++ E I+ L+ G
Sbjct: 321 CEALSHEKRLFFNR----------WVYTRPISREKMIALLETQG 354
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKE 206
L+G+P+ + DV F +GL I +GI + + G TG ++F ++ +AL RH++
Sbjct: 142 LRGMPFSVTEMDVSNFFDGLLI--DGIVLLKNGHGSNTGNGLVKFRSSDDTYEALKRHRQ 199
Query: 207 KIGHRLVTLVMSGAQWF 223
IG R V + S A ++
Sbjct: 200 YIGARYVEVSKSTANYW 216
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 35/61 (57%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
++C + +Q LP++ +K ++ F G +I + + + HD+ G G A + F + +A +A
Sbjct: 379 EKCVLFVQNLPFDVRKVEIMDFFHGFDITEDKVMLLHDHTGTGMGRALVVFQSEADATRA 438
Query: 201 L 201
L
Sbjct: 439 L 439
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RL LP++ + E++ F G ++P +++ ++ +G+ +G A F ++ A A+
Sbjct: 553 VRLVNLPFQIRTEEIYDFCYGYRLIPGSVSLQYEQSGKPSGSATAAFESRQEAMIAMAEL 612
Query: 205 KEK-IGHRLVTLVM 217
+ IG R V L++
Sbjct: 613 SGRPIGSRKVQLLL 626
>gi|302839324|ref|XP_002951219.1| hypothetical protein VOLCADRAFT_117772 [Volvox carteri f.
nagariensis]
gi|300263548|gb|EFJ47748.1| hypothetical protein VOLCADRAFT_117772 [Volvox carteri f.
nagariensis]
Length = 245
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
++L+GLPY + D+ +F E+ G++ ++ GR +G+A+ +FV KE A KAL
Sbjct: 42 AILKLKGLPYSATENDIRQFFAPYEL--KGVSFVYEPDGRPSGLAFAEFVSKEEALKALS 99
Query: 203 RHKEKIGHRLVTLV 216
++ E IG R V L+
Sbjct: 100 KNGEYIGQRYVRLL 113
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 17/197 (8%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
QFF P + + + GR SG A EF S ++A +AL ++ +G RY+ L
Sbjct: 60 QFFAPYELKGVSFVYEPDGRPSGLAFAEFVSKEEALKALSKNGEYIGQRYVRLLHVPRAE 119
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
+E GT G ++ ++ MR +R+ + ++ +A
Sbjct: 120 MEEQVRLGTLAIPG-----------AAAKLRSRMMRSQQRNSAVYMATGPLQLVPTTATS 168
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA- 200
++++GLPY ++ F + +P+ + I D GR +G A++ F + A +A
Sbjct: 169 -PTIKIRGLPYGSSPTEILAFFQTYHYLPDTLQIGLDQLGRPSGEAWLSFSSPQEALRAV 227
Query: 201 --LLRHKEKIGHRLVTL 215
L RH +G R + L
Sbjct: 228 RDLNRH--YLGTRYLEL 242
>gi|25013120|gb|AAN71659.1| SD14463p [Drosophila melanogaster]
Length = 359
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 5 FYVIDI--LIHITYCLLCSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQR 62
+Y I + L + ++ +FF+PI P N+ + + G SG AD F + +D+Q A++R
Sbjct: 253 YYTIHMRGLPYTSFENDVFKFFEPIRPANVRINYNKKGLHSGTADAYFDTYEDSQVAMKR 312
Query: 63 HKSNMGDRYIELYMEEGT 80
H+ MG RYIEL+ + T
Sbjct: 313 HREQMGSRYIELFYDGKT 330
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
G+ ++ + ++GLPY + DV KF E I P + I ++ G +G A F E+
Sbjct: 248 GNDIEYYTIHMRGLPYTSFENDVFKFFE--PIRPANVRINYNKKGLHSGTADAYFDTYED 305
Query: 197 AEKALLRHKEKIGHRLVTLVMSG 219
++ A+ RH+E++G R + L G
Sbjct: 306 SQVAMKRHREQMGSRYIELFYDG 328
>gi|312094676|ref|XP_003148104.1| hypothetical protein LOAG_12543 [Loa loa]
Length = 304
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 85/232 (36%), Gaps = 48/232 (20%)
Query: 12 IHITYCLLCSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRY 71
I I + S F + +I GR+SGE VE + + A + ++ + RY
Sbjct: 29 ISIWFLRYRSFFLFGLNAKSITFTLTSNGRASGECYVELDDQEAVKEAQKLDRNEINGRY 88
Query: 72 IELYMEEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQ 131
IE +F +S M R +K
Sbjct: 89 IE-------------------------------VFSVSDAELLMMIRH------GVIKGS 111
Query: 132 GAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQF 191
G +RL+GLPY +D+++F GLE+ I + GR +G A+++
Sbjct: 112 GGDADSRYASNFVVRLRGLPYSATIDDIKEFFSGLEVA--DAVIDKEPGGRPSGEAFVRL 169
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGAQWF---------LSPPLTNETPI 234
KE AE AL R K +G R V + S A + PP + P+
Sbjct: 170 ATKEYAELALERSKNYMGSRYVEVFRSSADEMDNSYYAARGIPPPTSGPVPL 221
>gi|170577075|ref|XP_001893871.1| RNA binding protein [Brugia malayi]
gi|158599846|gb|EDP37285.1| RNA binding protein, putative [Brugia malayi]
Length = 519
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RL+G+P+ DV++F GLE+ + I + GR +G A+++F K++AE AL R+
Sbjct: 134 VRLRGIPFSATNNDVKEFFSGLEVAD--VVIDKELGGRPSGEAFVRFASKQHAEMALERN 191
Query: 205 KEKIGHRLVTLVMS 218
+ +G R V + S
Sbjct: 192 RNNMGSRYVEVFRS 205
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RL+GLP+ K++DV FLEGLE+ +T GR +G Y++ VDK AE+A
Sbjct: 56 IRLRGLPFSAKEDDVRAFLEGLEV--KSVTFTLTSMGRASGECYVELVDKVAAEEAKRFD 113
Query: 205 KEKIGHRLV 213
K+++ +R +
Sbjct: 114 KQEMNNRYI 122
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
+FF + ++++ + GR SGEA V F+S A+ AL+R+++NMG RY+E++ G
Sbjct: 150 EFFSGLEVADVVIDKELGGRPSGEAFVRFASKQHAEMALERNRNNMGSRYVEVFRSSG 207
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 11 LIHITYCLLCSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDR 70
L + L FFKP+ V I L ++ R SG+A V F +V +A+ A+ R+K +G+R
Sbjct: 310 LPYSANALDIEDFFKPLNCVEIQLGFNEDRRPSGDACVIFGTVGEARDAMSRNKQCIGNR 369
Query: 71 YIELYM 76
YIEL+
Sbjct: 370 YIELFT 375
>gi|213514986|ref|NP_001135185.1| Heterogeneous nuclear ribonucleoprotein H3 [Salmo salar]
gi|209149642|gb|ACI32984.1| Heterogeneous nuclear ribonucleoprotein H3 [Salmo salar]
Length = 204
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%)
Query: 21 SQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
+ FF P+ PV + + G+S+GEADVEF S +DA A+ + K++M RYIEL++
Sbjct: 115 ANFFSPLTPVRVHIDFGPNGKSTGEADVEFRSHEDAVSAMSKDKNHMQHRYIELFLNSTA 174
Query: 81 SSKEANGR 88
S GR
Sbjct: 175 SGASEMGR 182
>gi|194376648|dbj|BAG57470.1| unnamed protein product [Homo sapiens]
Length = 404
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 173 ITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+T+P D+ GR TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 96 MTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKS 141
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ P+ + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 262 NFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELFLNSTAG 321
Query: 80 TS 81
TS
Sbjct: 322 TS 323
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L + I I D GR TG A ++F E+A A+ +
Sbjct: 245 CVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPD--GRVTGEADVEFATHEDAVAAMAK 302
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 303 DKANMQHRYVELFLN 317
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQF 191
+LS + ++++GLP+ C ++V +F +I +GI + GR +G A+++
Sbjct: 2 MLSTEGREGFVVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVEL 61
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA---QWFLSP 226
+E + AL + +E +GHR V + S + W P
Sbjct: 62 ESEEEVKLALKKDRETMGHRYVEVFKSNSVEMDWMTLP 99
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 33/44 (75%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
+ L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 96 MTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 139
>gi|327282636|ref|XP_003226048.1| PREDICTED: probable RNA-binding protein 19-like isoform 2 [Anolis
carolinensis]
Length = 938
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 45/181 (24%), Positives = 76/181 (41%), Gaps = 34/181 (18%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+F P+ PV I ++ + G +G V+F++ ++ Q+AL+R+ MG RYIEL+ EE +
Sbjct: 310 EFLVPLRPVAIRIVRNAHGNKTGYVFVDFNNEEEVQKALKRNHEYMGGRYIELFYEEHSK 369
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
+ + + W R K E D L G +
Sbjct: 370 KTKPSSKDPA---------------------RTWQRTKKVDEEDEDLSDSGRLF------ 402
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHD-YAGRCTGVAYIQFVDKENAEKA 200
++ LPY +ED+EK + I P D + G A++ ++ E+A KA
Sbjct: 403 -----VRNLPYTSTEEDLEKLFSKYGPLSE-IHFPIDGLTKKPKGFAFVTYMFPEHAVKA 456
Query: 201 L 201
Sbjct: 457 F 457
Score = 43.1 bits (100), Expect = 0.14, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
++L+G P+ +++V +FL L P I I + G TG ++ F ++E +KAL R+
Sbjct: 294 VKLRGAPFNVTEQNVREFLVPLR--PVAIRIVRNAHGNKTGYVFVDFNNEEEVQKALKRN 351
Query: 205 KEKIGHRLVTL 215
E +G R + L
Sbjct: 352 HEYMGGRYIEL 362
>gi|327282634|ref|XP_003226047.1| PREDICTED: probable RNA-binding protein 19-like isoform 1 [Anolis
carolinensis]
Length = 945
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 45/181 (24%), Positives = 76/181 (41%), Gaps = 34/181 (18%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+F P+ PV I ++ + G +G V+F++ ++ Q+AL+R+ MG RYIEL+ EE +
Sbjct: 310 EFLVPLRPVAIRIVRNAHGNKTGYVFVDFNNEEEVQKALKRNHEYMGGRYIELFYEEHSK 369
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
+ + + W R K E D L G +
Sbjct: 370 KTKPSSKDPA---------------------RTWQRTKKVDEEDEDLSDSGRLF------ 402
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHD-YAGRCTGVAYIQFVDKENAEKA 200
++ LPY +ED+EK + I P D + G A++ ++ E+A KA
Sbjct: 403 -----VRNLPYTSTEEDLEKLFSKYGPLSE-IHFPIDGLTKKPKGFAFVTYMFPEHAVKA 456
Query: 201 L 201
Sbjct: 457 F 457
Score = 43.1 bits (100), Expect = 0.14, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
++L+G P+ +++V +FL L P I I + G TG ++ F ++E +KAL R+
Sbjct: 294 VKLRGAPFNVTEQNVREFLVPLR--PVAIRIVRNAHGNKTGYVFVDFNNEEEVQKALKRN 351
Query: 205 KEKIGHRLVTL 215
E +G R + L
Sbjct: 352 HEYMGGRYIEL 362
>gi|159163272|pdb|1WEL|A Chain A, Solution Structure Of Rna Binding Domain In Np_006038
Length = 124
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 55/96 (57%), Gaps = 10/96 (10%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ L+GLP+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL R
Sbjct: 27 CVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCR 86
Query: 204 HKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDL 239
HK+ +G+R + + P+T + + ++D+
Sbjct: 87 HKQYMGNRFIQV----------HPITKKGMLEKIDM 112
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 45 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH 99
>gi|229891743|sp|A8WPC5.2|SYM2_CAEBR RecName: Full=RNA-binding protein sym-2; AltName: Full=Synthetic
lethal with mec-8 protein 2
Length = 634
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 37/180 (20%)
Query: 23 FFKPI-VPVNILLLTDDAGRSSGEAD--VEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
FF+P+ + IL +T GR +G D V+F + +DAQ+ L +H+ +G RYIEL+
Sbjct: 304 FFEPLKLTEKILFITRTDGRPTGNCDAFVQFETEEDAQQGLLKHRQVIGQRYIELFKSTA 363
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA 139
++ R + S P +A + + + D
Sbjct: 364 AEVQQVVKRC----NLINSAP----------VVANAVEVSDEKKKD-------------- 395
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLE--IVPNGITIPHDYAGRCTGVAYIQFVDKENA 197
C+RL+GLPYE + + FL + G+ + ++ G +G A+IQ + ++ A
Sbjct: 396 ----CVRLRGLPYEATVQHIVNFLGDFANMVKFQGVHMVYNNQGNPSGEAFIQMISEQAA 451
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGV--AYIQFVDKEN 196
+ + +R++GLPY+C + F E L++ + I GR TG A++QF +E+
Sbjct: 281 SANAVIVRMRGLPYDCTDTQIRAFFEPLKLTEKILFITRT-DGRPTGNCDAFVQFETEED 339
Query: 197 AEKALLRHKEKIGHRLVTLVMSGA 220
A++ LL+H++ IG R + L S A
Sbjct: 340 AQQGLLKHRQVIGQRYIELFKSTA 363
>gi|417409033|gb|JAA51043.1| Putative splicing factor hnrnp-f, partial [Desmodus rotundus]
Length = 251
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 129 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLNSTAG 188
Query: 80 TSSKEANGRGTGGFGGVKSTPYG 102
S + GG G + YG
Sbjct: 189 ASGGAYGSQMMGGMGLSNQSSYG 211
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 112 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 169
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 170 DKANMQHRYVELFLN 184
>gi|281427346|ref|NP_001163962.1| RNA binding motif protein 19 [Xenopus (Silurana) tropicalis]
gi|189442184|gb|AAI67335.1| Unknown (protein for MGC:135501) [Xenopus (Silurana) tropicalis]
Length = 542
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 34/180 (18%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+F P+ PV I + + G +G V+ +S ++ Q+AL+R+K MG RYIE++ + T
Sbjct: 297 EFLVPLKPVAIRIARNTYGNKTGYVFVDLNSEEEVQKALKRNKDYMGGRYIEVFRDNYTK 356
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
S + +S P W +R K+ E+ + G +
Sbjct: 357 SPSVPQK-------TQSRP--------------WEQRDKQEELQEDVSESGRLF------ 389
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHD-YAGRCTGVAYIQFVDKENAEKA 200
++ LPY C ++D+EK + + I P D + G A++ F+ E+A KA
Sbjct: 390 -----VRNLPYTCNEDDLEKLFSKYGPI-SEIHFPIDSLTKKPKGFAFVTFLITEHAVKA 443
Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
++L+G P+ +++V +FL + + P I I + G TG ++ +E +KAL R
Sbjct: 280 TVKLRGAPFNVTEQNVREFL--VPLKPVAIRIARNTYGNKTGYVFVDLNSEEEVQKALKR 337
Query: 204 HKEKIGHRLVTL 215
+K+ +G R + +
Sbjct: 338 NKDYMGGRYIEV 349
>gi|294461682|gb|ADE76400.1| unknown [Picea sitchensis]
Length = 265
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 81/203 (39%), Gaps = 37/203 (18%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF + V+ LL+ GR SGE V F S ALQR + NMG RYIE++
Sbjct: 80 EFFAGLDVVDALLVHKQ-GRFSGEGFVLFRSPMQVDFALQRDRQNMGRRYIEVFR----- 133
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQ--FLAKWMRRAKRSEMDWALKRQGAVLSGSA 139
C Q + A + D A G S
Sbjct: 134 -------------------------CKKQDYYNAVAAEVNEPKAGDDAAPPSGYSKGSSE 168
Query: 140 VDQC----CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
D ++L+GLP+ + D+ +F + ++ + I GR TG A+++F
Sbjct: 169 KDHMEHTGFLKLRGLPFSVSRRDIVEFFKDYQLKEKNVHIVTHSDGRATGEAFVEFSSAA 228
Query: 196 NAEKALLRHKEKIGHRLVTLVMS 218
+++ A+ + K IG R V L S
Sbjct: 229 DSKDAMSKDKMTIGTRYVELFPS 251
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP+ C + D+ +F GL++V + GR +G ++ F + AL R
Sbjct: 63 VVRLRGLPFNCSESDICEFFAGLDVVDALLVHKQ---GRFSGEGFVLFRSPMQVDFALQR 119
Query: 204 HKEKIGHRLVTL 215
++ +G R + +
Sbjct: 120 DRQNMGRRYIEV 131
>gi|168066869|ref|XP_001785353.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663050|gb|EDQ49838.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 239
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 84/198 (42%), Gaps = 16/198 (8%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + V++LL+ + GR SGEA V F + ALQ+++ N+G RYIE++ +
Sbjct: 46 DFFAGLDVVDVLLVRMN-GRFSGEAYVVFGAPVQVDYALQKNRHNIGRRYIEVFRCKKQD 104
Query: 82 SKEANGRGTGGFGGVKST-PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
A + ST P V + + + R+ L G V
Sbjct: 105 YYHAVAAEVADTRCIDSTLPLHV---LNNNSSSASAKAPSRNNTKDHLNFTGVV------ 155
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+L+GLP+ K DV F E+ + I GR TG A++ F A+ A
Sbjct: 156 -----KLRGLPFSATKSDVMDFFREFELHDEHVHIMLHSDGRTTGEAFVDFGSASKAKSA 210
Query: 201 LLRHKEKIGHRLVTLVMS 218
+ + K +G R V + S
Sbjct: 211 MNKDKMTMGSRYVEIFPS 228
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP+ C DV F GL++V + GR +G AY+ F + AL +
Sbjct: 29 VVRLRGLPFNCSDSDVFDFFAGLDVVD---VLLVRMNGRFSGEAYVVFGAPVQVDYALQK 85
Query: 204 HKEKIGHRLVTLVMSGAQWF 223
++ IG R + + Q +
Sbjct: 86 NRHNIGRRYIEVFRCKKQDY 105
>gi|393910110|gb|EJD75743.1| RNA recognition domain-containing protein [Loa loa]
Length = 674
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 85/232 (36%), Gaps = 48/232 (20%)
Query: 12 IHITYCLLCSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRY 71
I I + S F + +I GR+SGE VE + + A + ++ + RY
Sbjct: 29 ISIWFLRYRSFFLFGLNAKSITFTLTSNGRASGECYVELDDQEAVKEAQKLDRNEINGRY 88
Query: 72 IELYMEEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQ 131
IE +F +S M R +K
Sbjct: 89 IE-------------------------------VFSVSDAELLMMIR------HGVIKGS 111
Query: 132 GAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQF 191
G +RL+GLPY +D+++F GLE+ I + GR +G A+++
Sbjct: 112 GGDADSRYASNFVVRLRGLPYSATIDDIKEFFSGLEVA--DAVIDKEPGGRPSGEAFVRL 169
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGAQWF---------LSPPLTNETPI 234
KE AE AL R K +G R V + S A + PP + P+
Sbjct: 170 ATKEYAELALERSKNYMGSRYVEVFRSSADEMDNSYYAARGIPPPTSGPVPL 221
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 11 LIHITYCLLCSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDR 70
L + L +FF+P+ V I L ++ R SG+A V FS++ +A+ AL R+K+NMG R
Sbjct: 295 LPYSVTTLDIEEFFRPLNCVEIKLGYNEERRLSGDALVSFSTMAEAREALSRNKNNMGTR 354
>gi|94536671|ref|NP_001035439.1| uncharacterized protein LOC678601 [Danio rerio]
gi|92096562|gb|AAI15345.1| Zgc:136953 [Danio rerio]
gi|190338538|gb|AAI63730.1| Zgc:136953 [Danio rerio]
Length = 209
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
+ FF P+ PV + + G+S+GEADVEF S +DA A+ + K++M RYIEL++
Sbjct: 119 VAHFFGPLTPVRVHIDMGPNGKSTGEADVEFRSHEDAVSAMSKDKNHMQHRYIELFLNST 178
Query: 80 TS 81
+S
Sbjct: 179 SS 180
>gi|432117035|gb|ELK37602.1| Heterogeneous nuclear ribonucleoprotein H [Myotis davidii]
Length = 188
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 14/113 (12%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
F P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL T+
Sbjct: 57 IFSPLNPVRVHIAISPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELL--NSTAG 114
Query: 83 KEANGRGTGGFGGV------------KSTPYGVGIFCISQFLAKWMRRAKRSE 123
G+ GGV S+ GV ++ A W+ + + SE
Sbjct: 115 ASGGAYGSQMLGGVGLSNQSSTVAQPASSSVGVMEVAMAARAAWWIWQPRSSE 167
>gi|302782846|ref|XP_002973196.1| hypothetical protein SELMODRAFT_413714 [Selaginella moellendorffii]
gi|300158949|gb|EFJ25570.1| hypothetical protein SELMODRAFT_413714 [Selaginella moellendorffii]
Length = 289
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 87/205 (42%), Gaps = 19/205 (9%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--- 78
+FF + V++LL+ GR SGEA V + ALQR++ NMG RY+E++ +
Sbjct: 83 EFFAGLDVVDVLLVRKQ-GRFSGEAFVVLGAPMQVDFALQRNRQNMGRRYVEVFRSKKQD 141
Query: 79 --GTSSKEANGRGTGGFGGV---KSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGA 133
+ E N +G + G G K S D L
Sbjct: 142 YYSAVATEVNDPRSGDVLATLASSAAGGGGGGGGSGGGGGGGGSSGKNSLCDKDLAEHTG 201
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVD 193
VL +L+GLP+ K D+ +F + + + I GR TG AY+ F+
Sbjct: 202 VL----------KLRGLPFSASKRDIVEFFREFGLKEDSVQIVVHSDGRATGEAYVFFLG 251
Query: 194 KENAEKALLRHKEKIGHRLVTLVMS 218
+++ A+ + K +G+R V L S
Sbjct: 252 PGDSKAAMNKDKMTLGNRYVELFPS 276
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP+ C + DV +F GL++V + GR +G A++ + AL R
Sbjct: 66 VVRLRGLPFNCSESDVFEFFAGLDVVDVLLVRKQ---GRFSGEAFVVLGAPMQVDFALQR 122
Query: 204 HKEKIGHRLVTLVMSGAQWFLSPPLT 229
+++ +G R V + S Q + S T
Sbjct: 123 NRQNMGRRYVEVFRSKKQDYYSAVAT 148
>gi|170586440|ref|XP_001897987.1| RNA recognition motif. [Brugia malayi]
gi|158594382|gb|EDP32966.1| RNA recognition motif [Brugia malayi]
Length = 573
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 84/222 (37%), Gaps = 49/222 (22%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF + +I GR+SGE VE + + A + ++ + RYIE
Sbjct: 24 FFFGLNAKSITFTLTSNGRASGECYVELDDQEAVKEAQKLDRNEINGRYIE--------- 74
Query: 83 KEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA-VD 141
+F +S M R +K G + S
Sbjct: 75 ----------------------VFSVSDAELLMMIR------HGVIKSSGGGDADSRYAS 106
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+RL+GLPY +D+++F GLE+ I + GR +G A+++ KE AE AL
Sbjct: 107 NFVVRLRGLPYSATIDDIKEFFSGLEVA--DAVIDKEPGGRPSGEAFVRLATKEYAELAL 164
Query: 202 LRHKEKIGHRLVTLVMSGAQWF---------LSPPLTNETPI 234
R K +G R V + S A + PP + P+
Sbjct: 165 ERSKNYMGSRYVEVFRSSADEMDNSYYAARGIPPPTSGPVPL 206
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 11 LIHITYCLLCSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDR 70
L + L +FF+P+ V I L ++ R SG+A V FS++ +A+ AL R+K+NMG R
Sbjct: 280 LPYSVTTLDIEEFFRPLNCVEIKLGYNEERRLSGDALVTFSTMAEAREALSRNKNNMGTR 339
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
+FF + + ++ + GR SGEA V ++ + A+ AL+R K+ MG RY+E++
Sbjct: 126 EFFSGLEVADAVIDKEPGGRPSGEAFVRLATKEYAELALERSKNYMGSRYVEVF 179
>gi|148228969|ref|NP_001088073.1| RNA binding motif protein 19 [Xenopus laevis]
gi|52354760|gb|AAH82875.1| LOC494769 protein [Xenopus laevis]
Length = 920
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 113/277 (40%), Gaps = 59/277 (21%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+F P+ PV I + + G +G V+ SS ++ Q+AL+R+K MG RYIE++ + T
Sbjct: 297 EFLVPLKPVAIRIARNTYGNKTGYVFVDLSSEEEVQKALKRNKDYMGGRYIEVFRDNYTK 356
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
S + +S P W +R K+ L G +
Sbjct: 357 SPSVQSKA-------ESRP--------------WEQRDKQELQQEDLSESGRLF------ 389
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHD-YAGRCTGVAYIQFVDKENAEKA 200
++ LPY C ++D++K + I P D + G A++ F+ E+A KA
Sbjct: 390 -----VRNLPYSCTEDDLDKLFSKYGPISE-IHFPIDSLTKKPKGFAFVTFLITEHAVKA 443
Query: 201 LLRHKEKIGH-RLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVRSTICVLCHPLTPRS 259
+I RL+ ++ S A+ E S D +G + ++
Sbjct: 444 YAEVDGQIFQGRLLHVLPSAAK-------KEEVNESEGDASGYKKQ------------KA 484
Query: 260 VRPRSVRQSEHEWWALARLGSFLISRTHQIIIPRSYH 296
++ ++V S H W L F+ + + +I + Y+
Sbjct: 485 LKDKAVSSSSHNWNTL-----FMGTSSVADVIAQKYN 516
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
++L+G P+ +++V++FL + + P I I + G TG ++ +E +KAL R
Sbjct: 280 TVKLRGAPFNVTEQNVKEFL--VPLKPVAIRIARNTYGNKTGYVFVDLSSEEEVQKALKR 337
Query: 204 HKEKIGHRLVTL 215
+K+ +G R + +
Sbjct: 338 NKDYMGGRYIEV 349
>gi|302828822|ref|XP_002945978.1| splicing factor like protein [Volvox carteri f. nagariensis]
gi|300268793|gb|EFJ52973.1| splicing factor like protein [Volvox carteri f. nagariensis]
Length = 578
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 79/193 (40%), Gaps = 51/193 (26%)
Query: 30 VNILLLTDDAGRSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELYMEEGTSSKEANGR 88
V +++ AGRS+GE V+ S A A+ + H+ +G RYIE++
Sbjct: 61 VAQVVIGKRAGRSTGEGYVQLDSTSAAAEAIMKLHRQTLGHRYIEVF------------- 107
Query: 89 GTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQ 148
+ +E D A + LS + +R +
Sbjct: 108 -------------------------------ESTEADLATAKS---LSVDRMRGFVVRCR 133
Query: 149 GLPYECKKEDVEKFLEGLEIVPNGIT-IPHDYA--GRCTGVAYIQFVDKENAEKALLRHK 205
GLPY +DV F V GI + YA GR TG A+++F ++ +AL +HK
Sbjct: 134 GLPYTATAQDVLNFFGSDAPVVRGIEGVVFTYAPDGRPTGEAFVEFQTEDAQREALKKHK 193
Query: 206 EKIGHRLVTLVMS 218
E +G R + L +S
Sbjct: 194 ESMGARYIELFVS 206
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RL+GLP+ +EDV F G + + AGR TG Y+Q A +A++
Sbjct: 36 SVLRLRGLPFSAGEEDVRHFFSGFNVA---QVVIGKRAGRSTGEGYVQLDSTSAAAEAIM 92
Query: 203 R-HKEKIGHRLVTLVMS 218
+ H++ +GHR + + S
Sbjct: 93 KLHRQTLGHRYIEVFES 109
>gi|148233440|ref|NP_001079497.1| uncharacterized protein LOC379184 [Xenopus laevis]
gi|27694912|gb|AAH43858.1| MGC53694 protein [Xenopus laevis]
gi|80477878|gb|AAI08882.1| MGC53694 protein [Xenopus laevis]
Length = 658
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 21/208 (10%)
Query: 39 AGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME---EGTSSKEANGRGTGGFGG 95
G GEA + F + +DA+RA+ + I+L++ E + E N +G G
Sbjct: 36 TGGKHGEAFIIFPTDEDARRAMSCSGGFIKKSQIDLFLSSKAEMQHTLEMNRKGNKDLG- 94
Query: 96 VKSTPYGVGIFCISQ--FLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQ----- 148
+TP + + + K M +E + K + ++ M L+
Sbjct: 95 --ATPDISKLLNVMKKGIYQKNMVHKSNAEAGFDGKEENVPRPKYQGNEGTMPLKENGYG 152
Query: 149 -----GLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
GLPY + DV++F G ++ + + G G AY++F ++A+ +L R
Sbjct: 153 YVFLNGLPYTADEHDVKEFFHGFDVEDINFCVRQN--GDKDGKAYVKFATFQDAKASLSR 210
Query: 204 HKEKIGHRLVTLVMSGAQ-WFLSPPLTN 230
HKE IGHR + L +S W + TN
Sbjct: 211 HKEYIGHRYIFLKLSNEHAWIEAVSKTN 238
>gi|71121745|gb|AAH99792.1| Hnrph1 protein [Rattus norvegicus]
Length = 184
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 50/153 (32%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 51 GRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF------------------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ EMDW LK G +A D +RL+GLP+ C KE++
Sbjct: 87 ------------------KSNNVEMDWVLKHTGPNSPDTANDG-FVRLRGLPFGCSKEEI 127
Query: 160 EKFLEGL-------EIVPNGITIPHDYAGRCTG 185
+F G+ E+ I I H+ C+G
Sbjct: 128 VQFFSGILKYLRAVELKLELIMIHHENLWPCSG 160
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQF 191
+L + ++++GLP+ C ++V++F +I GI + GR +G A+++
Sbjct: 2 MLGAEGGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVEL 61
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMS 218
++ + AL + +E +GHR V + S
Sbjct: 62 ESEDEVKLALKKDRETMGHRYVEVFKS 88
>gi|261326510|emb|CBH09471.1| heterogeneous nuclear ribonucleoprotein H/F,putative [Trypanosoma
brucei gambiense DAL972]
Length = 488
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
C +RL+GLP+ ++DV F+E +E V + I I D GR TG A+I+ +E+ ++ L
Sbjct: 120 CVLRLRGLPFAATEDDVRTFIESMEGVLS-IDICRDMDGRNTGDAFIELASEEDVKRVKL 178
Query: 203 RHKEKIGHRLVTLVMS 218
H + +G+R + ++ S
Sbjct: 179 LHSKAMGNRYIEVLPS 194
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 43/75 (57%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+R++G+PY +E + +F G++I P G+ + +D R TG A+++ D+ + AL R
Sbjct: 388 VVRIRGVPYSASEEAIAEFFAGVKIPPQGVHMVYDERNRLTGEAFVEVEDRNDVLLALDR 447
Query: 204 HKEKIGHRLVTLVMS 218
+ +G R + + S
Sbjct: 448 NGAMMGTRYIEVFES 462
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 20 CSQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
++FF I P + ++ D+ R +GEA VE +D AL R+ + MG RYIE++
Sbjct: 403 IAEFFAGVKIPPQGVHMVYDERNRLTGEAFVEVEDRNDVLLALDRNGAMMGTRYIEVF-- 460
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFC 107
SS A R G+ S P +FC
Sbjct: 461 --ESSPAAMQRLGTAQMGMMSYPMVPQMFC 488
>gi|84043632|ref|XP_951606.1| heterogeneous nuclear ribonucleoprotein H/F [Trypanosoma brucei
TREU927]
gi|33348520|gb|AAQ15845.1| heterogeneous nuclear ribonucleoprotein H/F, putative [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
gi|62359177|gb|AAX79621.1| heterogeneous nuclear ribonucleoprotein H/F, putative [Trypanosoma
brucei]
Length = 487
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
C +RL+GLP+ ++DV F+E +E V + I I D GR TG A+I+ +E+ ++ L
Sbjct: 119 CVLRLRGLPFAATEDDVRTFIESMEGVLS-IDICRDMDGRNTGDAFIELASEEDVKRVKL 177
Query: 203 RHKEKIGHRLVTLVMS 218
H + +G+R + ++ S
Sbjct: 178 LHSKAMGNRYIEVLPS 193
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 43/75 (57%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+R++G+PY +E + +F G++I P G+ + +D R TG A+++ D+ + AL R
Sbjct: 387 VVRIRGVPYSASEEAIAEFFAGVKIPPQGVHMVYDERNRLTGEAFVEVEDRNDVLLALDR 446
Query: 204 HKEKIGHRLVTLVMS 218
+ +G R + + S
Sbjct: 447 NGAMMGTRYIEVFES 461
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 20 CSQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
++FF I P + ++ D+ R +GEA VE +D AL R+ + MG RYIE++
Sbjct: 402 IAEFFAGVKIPPQGVHMVYDERNRLTGEAFVEVEDRNDVLLALDRNGAMMGTRYIEVF-- 459
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFC 107
SS A R G+ S P +FC
Sbjct: 460 --ESSPAAMQRLGTAQMGMMSYPMVPQMFC 487
>gi|298713992|emb|CBJ27224.1| heterogeneous nuclear ribonucleoprotein, putative [Ectocarpus
siliculosus]
Length = 525
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+R++GLPY K +V F +G I G+ GR TG AY++F +E+A+ L
Sbjct: 437 TVIRMRGLPYRASKSEVMCFFKGCSIPEEGVAFVTRADGRVTGEAYVRFATREDAKMGLR 496
Query: 203 RHKEKIGHRLVTLVMS 218
+ +E IG R + L S
Sbjct: 497 KDREMIGSRYIELFTS 512
>gi|449016117|dbj|BAM79519.1| similar to heterogeneous nuclear ribonucleoprotein H3, isoform a
[Cyanidioschyzon merolae strain 10D]
Length = 642
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 97/263 (36%), Gaps = 74/263 (28%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT------ 80
++P I+ + + GR +GE V+F+S +DA R L +H+ MG RYIE+++
Sbjct: 358 VLPGGIVFVYNHQGRKTGEVFVQFASPEDASRCLHKHEDRMGHRYIEVFLSSHQDMWNLL 417
Query: 81 ----SSKEANGRGTGGFGGVKSTP-----------YGVGIFCIS-QFLAKWMRRAKRSEM 124
+ + A G G G S G+ +S Q A M R
Sbjct: 418 SRYEAKRAALGLGAAGSPAATSGAQVRNGNRTDRELGLSPANVSQQASAVAMGVPLRQPG 477
Query: 125 DW-----------------------------ALKRQGAVLSGSAVDQCCMRLQGLPYECK 155
DW A R+G + SA C+RL G+
Sbjct: 478 DWTPSSATFRPEMVSHTPPEGLAPVVQAGTSASTREGPMDLMSATQSPCLRLSGVDATVT 537
Query: 156 KEDVEKFLEGLEI------------------VPNGITIP-----HDYAGRCTGVAYIQFV 192
+ DV +F+ ++ VP G TIP + G+ +G + F
Sbjct: 538 ERDVHRFIAPFQLDTSQGASILACFADHGVRVPPGTTIPPVFTVRNSTGQPSGEFTLVFQ 597
Query: 193 DKENAEKALLRHKEKIGHRLVTL 215
+ ++AL + + +G R V L
Sbjct: 598 NVSERDRALCKSGQLLGSRPVKL 620
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 23/105 (21%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEG---------------------LEIVPNGITIPHDYAG 181
+RL+GLP+ DV +++ L+++P GI +++ G
Sbjct: 312 SVVRLRGLPWSATTRDVAEWIRQPPAKATMGADSSLLEDFIRRPLQVLPGGIVFVYNHQG 371
Query: 182 RCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGAQ--WFL 224
R TG ++QF E+A + L +H++++GHR + + +S Q W L
Sbjct: 372 RKTGEVFVQFASPEDASRCLHKHEDRMGHRYIEVFLSSHQDMWNL 416
>gi|281203425|gb|EFA77625.1| hypothetical protein PPL_12232 [Polysphondylium pallidum PN500]
Length = 1794
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL--L 202
+RL+GLPY DV F G I N I I DY GR TG +++FV E A AL L
Sbjct: 1251 VRLRGLPYNVTPADVISFFSGYAISGNNILIEKDYNGRVTGEGFVEFVTFETASSALKHL 1310
Query: 203 RHKEKIGHRLVTL 215
+HK I R + L
Sbjct: 1311 QHK-AISSRYIEL 1322
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 45/70 (64%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKE 206
++G+P+ + + F + + I+PNGITI + G+ +G AYI+FVD++ A KA H++
Sbjct: 1155 IRGMPWSTNEGQIRDFFKPVPIMPNGITILMNSHGKQSGEAYIEFVDEDAARKANDYHRK 1214
Query: 207 KIGHRLVTLV 216
+ HR + ++
Sbjct: 1215 MMRHRYIEVL 1224
Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIEL 74
FFKP I+P I +L + G+ SGEA +EF D A++A H+ M RYIE+
Sbjct: 1170 FFKPVPIMPNGITILMNSHGKQSGEAYIEFVDEDAARKANDYHRKMMRHRYIEV 1223
Score = 42.4 bits (98), Expect = 0.26, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
++L+GLPY ++ + F +GL + I I + GR +G+AY+ + + ++AL R+
Sbjct: 1721 VKLRGLPYSATEDSIADFFDGLGVT--NIKIIYQ-RGRPSGLAYVSLSSQYDYDQALKRN 1777
Query: 205 KEKIGHRLVTLVMSGAQWF 223
K +G +V V+ W+
Sbjct: 1778 KNHMGSSVVVTVI---HWY 1793
>gi|255645750|gb|ACU23368.1| unknown [Glycine max]
Length = 260
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 90/217 (41%), Gaps = 32/217 (14%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
++FF + V++L + G+ +GE ALQ ++ NMG RY+E++ +
Sbjct: 74 VAEFFHGLDIVDVLFVHK-GGKFTGEGFCVLGYPLQVDFALQGNRQNMGRRYVEVFRSK- 131
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA 139
+ Y +S RR+ + + A +G
Sbjct: 132 -----------------RQEYYKAIANEVSDARGGSPRRSASRAKSYDEGKDSAEHTG-- 172
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
+RL+GLP+ K+D+ +F + + + I I + GR G AY +F E+++
Sbjct: 173 ----VLRLRGLPFFASKDDIMEFFKDFGLPEDSIHIIMNSEGRPFGEAYAEFASAEDSKA 228
Query: 200 ALLRHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISR 236
A+++ + +G R + L F S P E ISR
Sbjct: 229 AMVKDRMTLGSRYIEL-------FPSSPGEMEEAISR 258
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP++C + DV +F GL+IV + H G+ TG + + AL
Sbjct: 59 VVRLRGLPFDCTETDVAEFFHGLDIVD--VLFVHK-GGKFTGEGFCVLGYPLQVDFALQG 115
Query: 204 HKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVRST 247
+++ +G R V + S Q + + NE +R GSP RS
Sbjct: 116 NRQNMGRRYVEVFRSKRQEYYK-AIANEVSDAR---GGSPRRSA 155
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 22 QFFKPI-VPVN-ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
+FFK +P + I ++ + GR GEA EF+S +D++ A+ + + +G RYIEL+
Sbjct: 190 EFFKDFGLPEDSIHIIMNSEGRPFGEAYAEFASAEDSKAAMVKDRMTLGSRYIELFPSSP 249
Query: 80 TSSKEANGRG 89
+EA RG
Sbjct: 250 GEMEEAISRG 259
>gi|148701751|gb|EDL33698.1| heterogeneous nuclear ribonucleoprotein H1, isoform CRA_a [Mus
musculus]
Length = 311
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 146 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLN 201
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 129 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 186
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 187 DKANMQHRYVELFLN 201
>gi|380806715|gb|AFE75233.1| heterogeneous nuclear ribonucleoprotein H, partial [Macaca
mulatta]
Length = 112
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 43 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLN 98
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 26 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 83
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 84 DKANMQHRYVELFLN 98
>gi|380806713|gb|AFE75232.1| heterogeneous nuclear ribonucleoprotein H, partial [Macaca
mulatta]
Length = 118
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 43 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLN 98
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 26 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 83
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 84 DKANMQHRYVELFLN 98
>gi|357460387|ref|XP_003600475.1| Heterogeneous nuclear ribonucleoprotein F [Medicago truncatula]
gi|355489523|gb|AES70726.1| Heterogeneous nuclear ribonucleoprotein F [Medicago truncatula]
Length = 259
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 86/199 (43%), Gaps = 25/199 (12%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
++FF + V++L + G+ SGE ALQR++ N+G RY+E++ +
Sbjct: 73 VAEFFHGLDIVDVLFVHK-GGKFSGEGFCVLGYPLQVDFALQRNRQNIGRRYVEVFRSK- 130
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA 139
+ Y +S RR+ + + A +G
Sbjct: 131 -----------------RQEYYKAIANEVSDARGGSPRRSAPRAKSYDEGKDSAEHTG-- 171
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
+RL+GLP+ K+D+ F + + + I I + GR +G AY++F + ++++
Sbjct: 172 ----VLRLRGLPFSANKDDIMDFFKEYVLSEDSIHIVMNSEGRPSGEAYVEFENADDSKA 227
Query: 200 ALLRHKEKIGHRLVTLVMS 218
A+ + + +G R + L S
Sbjct: 228 AMAKDRMTLGSRYIELFPS 246
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP++C + DV +F GL+IV + H G+ +G + + AL R
Sbjct: 58 VVRLRGLPFDCTETDVAEFFHGLDIVD--VLFVHK-GGKFSGEGFCVLGYPLQVDFALQR 114
Query: 204 HKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVRST 247
+++ IG R V + S Q + + NE +R GSP RS
Sbjct: 115 NRQNIGRRYVEVFRSKRQEYYK-AIANEVSDAR---GGSPRRSA 154
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 22 QFFKPIV--PVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
FFK V +I ++ + GR SGEA VEF + DD++ A+ + + +G RYIEL+
Sbjct: 189 DFFKEYVLSEDSIHIVMNSEGRPSGEAYVEFENADDSKAAMAKDRMTLGSRYIELFPSTH 248
Query: 80 TSSKEANGRG 89
++A RG
Sbjct: 249 GEMEDAISRG 258
>gi|148701753|gb|EDL33700.1| heterogeneous nuclear ribonucleoprotein H1, isoform CRA_c [Mus
musculus]
Length = 288
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 146 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLN 201
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 129 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 186
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 187 DKANMQHRYVELFLN 201
>gi|224002324|ref|XP_002290834.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974256|gb|EED92586.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 387
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 44/74 (59%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RL+GLP++ K+D+ F + + + + + + GR TG Y+ F D ++A++A+ H
Sbjct: 299 VRLRGLPFQASKQDILDFFQEYNPIESSVLLTYRGDGRSTGEGYVAFKDADDAKEAMALH 358
Query: 205 KEKIGHRLVTLVMS 218
+ IG R + L +S
Sbjct: 359 RSTIGSRYIELFIS 372
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Query: 23 FFKPIVPV--NILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FF+ P+ ++LL GRS+GE V F DDA+ A+ H+S +G RYIEL++
Sbjct: 316 FFQEYNPIESSVLLTYRGDGRSTGEGYVAFKDADDAKEAMALHRSTIGSRYIELFI---- 371
Query: 81 SSKEANGR 88
S+KE + R
Sbjct: 372 SNKEEHAR 379
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+R++GLP+E EDV F +GL +V + + +PH +G A++ F + + + L R
Sbjct: 93 CVRVRGLPFEATLEDVLVFFQGL-VVIDVVLVPHAESGE----AFVVFANPMDFQMGLQR 147
Query: 204 HKEKIGHRLVTL 215
+ +G R + +
Sbjct: 148 DHQSMGRRYLEV 159
Score = 37.4 bits (85), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
FF+ +V ++++L+ SGEA V F++ D Q LQR +MG RY+E++
Sbjct: 111 FFQGLVVIDVVLVPH---AESGEAFVVFANPMDFQMGLQRDHQSMGRRYLEVF 160
>gi|7739445|gb|AAF68850.1|AF132362_1 hnRNP 2H9B [Homo sapiens]
gi|7739437|gb|AAF68844.1| hnRNP 2H9B [Homo sapiens]
Length = 297
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 178 DYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGA---QWFLSPP 227
DY GR TG A++QF KE AE AL +HKE+IGHR + + S + F PP
Sbjct: 2 DYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSSRSEIKGFYDPP 54
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K+NM RYIEL++
Sbjct: 162 IANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIELFLN 219
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKE 206
++GLP+ + D+ F L + I I D GR TG A ++FV E+A A+ + K
Sbjct: 150 MRGLPFRATENDIANFFSPLNPIRVHIDIGAD--GRATGEADVEFVTHEDAVAAMSKDKN 207
Query: 207 KIGHRLVTLVMS 218
+ HR + L ++
Sbjct: 208 NMQHRYIELFLN 219
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%)
Query: 37 DDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
D GRS+GEA V+F+S + A+ AL +HK +G RYIE++
Sbjct: 2 DYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIF 40
>gi|67971142|dbj|BAE01913.1| unnamed protein product [Macaca fascicularis]
Length = 286
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 144 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLN 199
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 127 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 184
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 185 DKANMQHRYVELFLN 199
>gi|300120924|emb|CBK21166.2| unnamed protein product [Blastocystis hominis]
Length = 361
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 23/157 (14%)
Query: 95 GVKSTPYGVGIFCISQFL--AKWMRRAKRSEMDWALKRQGAVLSGSAVD---------QC 143
GV P ISQ+ K +R+ + ++ + + +G+A D Q
Sbjct: 90 GVNGKPID---LSISQYRRSKKNLRKKQNAKNQKEDETETKETNGTAEDEDVNESDKNQT 146
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIP-HDYAGRCTGVAYIQFVDKENAEKALL 202
+ LQGLPY+ +E + +FL + I IP + +GRC G A++ F ++ A+ AL
Sbjct: 147 EVHLQGLPYDTTEETIREFLGECGTIKE-IRIPTYQDSGRCRGYAFVSFTNQAGAQAALK 205
Query: 203 RHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDL 239
++KE IG R +T+ S + + P+S+ D+
Sbjct: 206 KNKEYIGERYITISYSNNR-------NDNIPMSKKDV 235
>gi|51476543|emb|CAH18256.1| hypothetical protein [Homo sapiens]
Length = 194
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 129 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLN 184
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 112 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 169
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 170 DKANMQHRYVELFLN 184
>gi|417409228|gb|JAA51131.1| Putative splicing factor hnrnp-f, partial [Desmodus rotundus]
Length = 271
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 129 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLN 184
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 112 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 169
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 170 DKANMQHRYVELFLN 184
>gi|405971235|gb|EKC36082.1| RNA-binding protein 12 [Crassostrea gigas]
Length = 487
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
C+ LQGLP +D+ K +G++I GI I HD GR G A+++F D EKAL
Sbjct: 209 CVHLQGLPPHVVAKDIAKLFDGIDIAQRGIHIVHDSNGRPLGEAFVEFSDNSECEKAL 266
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEK 199
Q ++++GL KK DV +F +G EI N GI I +D RCTG A+I+ + +
Sbjct: 73 QYIIQMKGLGINGKKVDVVEFFKGCEIAKNGEGIHIEYDIKNRCTGTAFIEMSTLSDFQT 132
Query: 200 ALLRHKEKIGHRLV 213
AL + RL+
Sbjct: 133 ALTFDGKMFNSRLI 146
>gi|196003222|ref|XP_002111478.1| hypothetical protein TRIADDRAFT_13868 [Trichoplax adhaerens]
gi|190585377|gb|EDV25445.1| hypothetical protein TRIADDRAFT_13868, partial [Trichoplax
adhaerens]
Length = 302
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 36/202 (17%)
Query: 22 QFFKPIVPV-----NILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FFK V +LLL GR++GE V F + + A+ A+ + M + +IELY
Sbjct: 121 NFFKGTADVLDNEEGVLLLLSADGRTTGEGYVAFKTPEIARSAIYKDYKIMANHHIELY- 179
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
S +A ++ + + L ++++ S D
Sbjct: 180 --DCSLNDA-------LKALQESHISSSYRKNDKILTNLRQKSQESVRD----------- 219
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDK 194
C+RL+GLP+ + D+ F+ L +I NGI + + GR +G AYIQ +
Sbjct: 220 -------CIRLRGLPFTATEPDITNFMGELADKIALNGIHLCINDRGRPSGDAYIQMLSA 272
Query: 195 ENAEK-ALLRHKEKIGHRLVTL 215
E+A K A +H+E +G R + +
Sbjct: 273 EDAIKSAEKKHREHLGTRWIEV 294
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 39/88 (44%)
Query: 150 LPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIG 209
LP +DV F GL I+ GI+ G+ G AY++F D + AL RH + I
Sbjct: 6 LPTYLNDQDVASFFRGLNIIRGGISFLLSEYGKRYGQAYVKFEDTVQRDLALKRHSQYID 65
Query: 210 HRLVTLVMSGAQWFLSPPLTNETPISRL 237
+ + + A P + T ++ L
Sbjct: 66 QKSIRIYKINAGQGFIPNVGGATIVNAL 93
>gi|296480483|tpg|DAA22598.1| TPA: mCG11326-like [Bos taurus]
Length = 290
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 38/57 (66%)
Query: 21 SQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K+NM RYIEL++
Sbjct: 156 ANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIELFLN 212
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKE 206
++GLP+ + D+ F L + I I D GR TG A ++FV E+A A+ + K
Sbjct: 143 MRGLPFRATENDIANFFSPLNPIRVHIDIGAD--GRATGEADVEFVTHEDAVAAMSKDKN 200
Query: 207 KIGHRLVTLVMS 218
+ HR + L ++
Sbjct: 201 NMQHRYIELFLN 212
>gi|303278009|ref|XP_003058298.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460955|gb|EEH58249.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 230
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 32/204 (15%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
+FF+ + PV++L++ D GR++GEA V ++ + ALQ+++ MG R Y+E
Sbjct: 41 VQEFFQGLEPVDVLIVRRD-GRATGEAYVVLANQMLMEVALQKNRGPMGRR----YIEVF 95
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA 139
S K+ + V I + + A
Sbjct: 96 RSKKQ-------------DYYHAVSI---------AVNEPDYGNGNGGQGGGYYDNGPLA 133
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLE--GLEIVP---NGITIPHDYAGRCTGVAYIQFVDK 194
++L+GLP+ K+D+ F + L + P + I I GR +GVA+++FV
Sbjct: 134 EHTGVLKLRGLPFSATKDDIITFFDDKSLGVSPLVHDSIHIVLSVDGRPSGVAFVEFVSA 193
Query: 195 ENAEKALLRHKEKIGHRLVTLVMS 218
E+A+ A+++ + +G R V L S
Sbjct: 194 EDAKTAMIKDRSSMGTRYVELFPS 217
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP+ + DV++F +GLE V + + + D GR TG AY+ ++ E AL +
Sbjct: 26 VVRLRGLPFNASEYDVQEFFQGLEPV-DVLIVRRD--GRATGEAYVVLANQMLMEVALQK 82
Query: 204 HKEKIGHRLVTLVMSGAQWF 223
++ +G R + + S Q +
Sbjct: 83 NRGPMGRRYIEVFRSKKQDY 102
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 14 ITYCLLCSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIE 73
IT+ S P+V +I ++ GR SG A VEF S +DA+ A+ + +S+MG RY+E
Sbjct: 154 ITFFDDKSLGVSPLVHDSIHIVLSVDGRPSGVAFVEFVSAEDAKTAMIKDRSSMGTRYVE 213
Query: 74 LYMEEGTSSKEANGRGTGG 92
L+ +S +EA T G
Sbjct: 214 LFP---SSREEATRAATSG 229
>gi|74222440|dbj|BAE38120.1| unnamed protein product [Mus musculus]
Length = 272
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 130 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLN 185
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 113 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 170
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 171 DKANMQHRYVELFLN 185
>gi|119574671|gb|EAW54286.1| heterogeneous nuclear ribonucleoprotein H3 (2H9), isoform CRA_e
[Homo sapiens]
Length = 177
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K+NM RYIEL++
Sbjct: 42 IANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIELFLN 99
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+ ++GLP+ + D+ F L + I I D GR TG A ++FV E+A A+ +
Sbjct: 28 VHMRGLPFRATENDIANFFSPLNPIRVHIDIGAD--GRATGEADVEFVTHEDAVAAMSKD 85
Query: 205 KEKIGHRLVTLVMS 218
K + HR + L ++
Sbjct: 86 KNNMQHRYIELFLN 99
>gi|307110461|gb|EFN58697.1| hypothetical protein CHLNCDRAFT_20050, partial [Chlorella
variabilis]
Length = 81
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RL+GLP+ +DV +F EG+E V G+ GR TG AY+ D E A+
Sbjct: 1 VRLRGLPFTSTAQDVLQFFEGVETVGGEAGVVFTCTPDGRPTGEAYVALPDAEALAGAVA 60
Query: 203 RHKEKIGHRLVTLVMS 218
RHK+KIG R + + S
Sbjct: 61 RHKDKIGTRYIEIFES 76
>gi|402583247|gb|EJW77191.1| hypothetical protein WUBG_11899 [Wuchereria bancrofti]
Length = 82
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 145 MRLQGLPYECKKEDVEKFL----EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+R++GLPY+C + + +F G ++ GI + GR TG A++ F ++E +KA
Sbjct: 3 VRMRGLPYDCTEAQILEFFAEGENGCKVTDGGILFVNKSDGRPTGDAFVMFDNEEAGQKA 62
Query: 201 LLRHKEKIGHRLVTL 215
L +HK IG R + L
Sbjct: 63 LTKHKRTIGTRYIEL 77
Score = 43.5 bits (101), Expect = 0.11, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
IL + GR +G+A V F + + Q+AL +HK +G RYIEL+ +
Sbjct: 35 ILFVNKSDGRPTGDAFVMFDNEEAGQKALTKHKRTIGTRYIELFRQ 80
>gi|112491343|pdb|2HGN|A Chain A, Nmr Structure Of The Third Qrrm Domain Of Human Hnrnp F
gi|297787489|pdb|2KG1|A Chain A, Structure Of The Third Qrrm Domain Of Hnrnp F In Complex
With A Agggau G-Tract Rna
Length = 139
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++ T
Sbjct: 65 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTG 124
Query: 82 SKEA 85
+
Sbjct: 125 ASNG 128
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY+ + D+ F L V I I D GR TG A ++F E A A+ +
Sbjct: 48 CVHMRGLPYKATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEEAVAAMSK 105
Query: 204 HKEKIGHRLVTLVMS 218
+ + HR + L ++
Sbjct: 106 DRANMQHRYIELFLN 120
>gi|226501122|ref|NP_001148833.1| RNA binding protein [Zea mays]
gi|195622468|gb|ACG33064.1| RNA binding protein [Zea mays]
Length = 268
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 81/184 (44%), Gaps = 24/184 (13%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY--MEEG 79
+FF + V+ LL+ + GR +GEA V F + + AL R++ NMG RY+E++ ++
Sbjct: 105 KFFVGLDIVDCLLVNKN-GRFTGEAFVVFPTAMQTEFALHRNRQNMGRRYVEVFRCKKQE 163
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA 139
S AN GG+ F +++ R + + +
Sbjct: 164 YYSAIANEVSQGGY-----------------FESEYRRSSPPPRPPKKPAEDKGSMEYTE 206
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
V ++L+GLPY ED+ KF E+ + I G+ TG A+++F E A+
Sbjct: 207 V----LKLRGLPYSATTEDIIKFFLEYELTEENVHIAIRSDGKATGEAFVEFPTAEVAKT 262
Query: 200 ALLR 203
R
Sbjct: 263 RCAR 266
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RL+GLP++C D+ KF GL+IV + + GR TG A++ F E AL R+
Sbjct: 89 VRLRGLPFDCNDIDICKFFVGLDIVD---CLLVNKNGRFTGEAFVVFPTAMQTEFALHRN 145
Query: 205 KEKIGHRLVTLVMSGAQWFLSPPLTNE 231
++ +G R V + Q + S + NE
Sbjct: 146 RQNMGRRYVEVFRCKKQEYYS-AIANE 171
>gi|39644691|gb|AAH04511.2| HNRPH3 protein, partial [Homo sapiens]
Length = 207
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K+NM RYIEL++
Sbjct: 72 IANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIELFLN 129
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+ ++GLP+ + D+ F L + I I D GR TG A ++FV E+A A+ +
Sbjct: 58 VHMRGLPFRATENDIANFFSPLNPIRVHIDIGAD--GRATGEADVEFVTHEDAVAAMSKD 115
Query: 205 KEKIGHRLVTLVMS 218
K + HR + L ++
Sbjct: 116 KNNMQHRYIELFLN 129
>gi|194379882|dbj|BAG58293.1| unnamed protein product [Homo sapiens]
Length = 238
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 38/57 (66%)
Query: 21 SQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K+NM RYIEL++
Sbjct: 104 ANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIELFLN 160
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+ ++GLP+ + D+ F L + I I D GR TG A ++FV E+A A+ +
Sbjct: 89 VHMRGLPFRATENDIANFFSPLNPIRVHIDIGAD--GRATGEADVEFVTHEDAVAAMSKD 146
Query: 205 KEKIGHRLVTLVMS 218
K + HR + L ++
Sbjct: 147 KNNMQHRYIELFLN 160
>gi|349605437|gb|AEQ00674.1| Heteroproteinous nuclear ribonucleoprotein H3-like protein, partial
[Equus caballus]
Length = 200
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K+NM RYIEL++
Sbjct: 65 IANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIELFLN 122
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+ ++GLP+ + D+ F L + I I D GR TG A ++FV E+A A+ +
Sbjct: 51 VHMRGLPFRATENDIANFFSPLNPIRVHIDIGAD--GRATGEADVEFVTHEDAVAAMSKD 108
Query: 205 KEKIGHRLVTLVMS 218
K + HR + L ++
Sbjct: 109 KNNMQHRYIELFLN 122
>gi|5911913|emb|CAB55897.1| hypothetical protein [Homo sapiens]
gi|7739441|gb|AAF68848.1| hnRNP 2H9C [Homo sapiens]
gi|119574666|gb|EAW54281.1| heterogeneous nuclear ribonucleoprotein H3 (2H9), isoform CRA_b
[Homo sapiens]
gi|119574669|gb|EAW54284.1| heterogeneous nuclear ribonucleoprotein H3 (2H9), isoform CRA_b
[Homo sapiens]
gi|119574672|gb|EAW54287.1| heterogeneous nuclear ribonucleoprotein H3 (2H9), isoform CRA_b
[Homo sapiens]
gi|119574673|gb|EAW54288.1| heterogeneous nuclear ribonucleoprotein H3 (2H9), isoform CRA_b
[Homo sapiens]
gi|193787147|dbj|BAG52353.1| unnamed protein product [Homo sapiens]
Length = 215
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K+NM RYIEL++
Sbjct: 80 IANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIELFLN 137
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKE 206
++GLP+ + D+ F L + I I D GR TG A ++FV E+A A+ + K
Sbjct: 68 MRGLPFRATENDIANFFSPLNPIRVHIDIGAD--GRATGEADVEFVTHEDAVAAMSKDKN 125
Query: 207 KIGHRLVTLVMS 218
+ HR + L ++
Sbjct: 126 NMQHRYIELFLN 137
>gi|388513407|gb|AFK44765.1| unknown [Medicago truncatula]
Length = 158
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 21/160 (13%)
Query: 59 ALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRR 118
ALQR + NMG RY+E++ + A G + G+ Y S ++ R
Sbjct: 6 ALQRDRQNMGRRYVEVFRCKKQDYYNAVA-GEINYEGIYDDDYQG-----SPPPSRSKRF 59
Query: 119 AKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHD 178
+ + +MD+ ++++GLP+ K + F + +++ + I
Sbjct: 60 SDKEQMDYTE---------------ILKMRGLPFLVTKSQIIDFFKDYKLIEGRVHIACR 104
Query: 179 YAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
G+ TG AY++FV + A++A+ + K IG R V L S
Sbjct: 105 PDGKATGEAYVEFVSPDEAKRAMFKDKMTIGSRYVELFPS 144
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGR 88
G+++GEA VEF S D+A+RA+ + K +G RY+EL+ ++ A R
Sbjct: 107 GKATGEAYVEFVSPDEAKRAMFKDKMTIGSRYVELFPSTPDEARRAESR 155
>gi|340382973|ref|XP_003389992.1| PREDICTED: probable RNA-binding protein 19-like [Amphimedon
queenslandica]
Length = 660
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 38/62 (61%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF PI NI LL DD R SG A V+ S D + A++R+K MG RYIEL ++ G+
Sbjct: 289 KFFSPIQLSNIRLLKDDRERCSGLAFVDVMSKTDLKEAMKRNKGRMGRRYIELVVDTGSK 348
Query: 82 SK 83
K
Sbjct: 349 EK 350
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+R++GLPY+ ++ V KF +++ + I + D RC+G+A++ + K + ++A+ R
Sbjct: 272 TIRMRGLPYDASEKHVHKFFSPIQL--SNIRLLKDDRERCSGLAFVDVMSKTDLKEAMKR 329
Query: 204 HKEKIGHRLVTLVM 217
+K ++G R + LV+
Sbjct: 330 NKGRMGRRYIELVV 343
>gi|146197828|dbj|BAF57627.1| hnRNP F protein [Dugesia japonica]
Length = 344
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 122 SEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAG 181
++ DW + LS D +RL+GLPY+ KED+ F L I +G+ + +
Sbjct: 77 TQKDWFGEEMRMKLS----DMTYVRLRGLPYDVTKEDIFIFFSRLMISRDGVGLLYGPDD 132
Query: 182 RCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
TG A++QF+ +E+A AL RH + I R + + S
Sbjct: 133 VPTGEAFVQFMTREDANLALQRHNQCIRSRYIEIYKS 169
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 82/219 (37%), Gaps = 37/219 (16%)
Query: 30 VNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEA---- 85
V +L DD +GEA V+F + +DA ALQRH + RYIE+Y T A
Sbjct: 124 VGLLYGPDDV--PTGEAFVQFMTREDANLALQRHNQCIRSRYIEIYKSSLTEVYRAMEKQ 181
Query: 86 -----------------------NGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRS 122
N + Y SQ + R +K
Sbjct: 182 YEINREEILRRSRHRPANFPPKFNADPYSHVNSYYTDGYSFPQNKSSQGPMRRSRESKNR 241
Query: 123 EMDWALKRQGAVLS------GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIP 176
+ K + + G + + ++GLPY ++DV +F L + I +
Sbjct: 242 SNPYGGKNSHSSVKVETQNFGEFLGPLSIHMRGLPYTATEKDVHEFFAPLRVAEVKIQLG 301
Query: 177 HDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTL 215
D G+ TG A F + +A KA+ + + K+ R + L
Sbjct: 302 PD--GKNTGEAEADFYSENDAVKAMEKDRCKMSWRYIEL 338
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 34/54 (62%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
+FF P+ + + G+++GEA+ +F S +DA +A+++ + M RYIEL+
Sbjct: 286 EFFAPLRVAEVKIQLGPDGKNTGEAEADFYSENDAVKAMEKDRCKMSWRYIELF 339
>gi|159163284|pdb|1WEZ|A Chain A, Solution Structure Of Rrm Domain In Heterogeneous
Nuclear Ribonucleoprotein H'
Length = 102
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ P+ + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 34 NFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELFL 88
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L + I I D GR TG A ++F E+A A+ +
Sbjct: 17 CVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPD--GRVTGEADVEFATHEDAVAAMAK 74
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 75 DKANMQHRYVELFLN 89
>gi|149052457|gb|EDM04274.1| heterogeneous nuclear ribonucleoprotein H1, isoform CRA_c [Rattus
norvegicus]
Length = 134
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 54/127 (42%), Gaps = 43/127 (33%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 51 GRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF------------------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ EMDW LK G +A D +RL+GLP+ C KE++
Sbjct: 87 ------------------KSNNVEMDWVLKHTGPNSPDTANDG-FVRLRGLPFGCSKEEI 127
Query: 160 EKFLEGL 166
+F G+
Sbjct: 128 VQFFSGM 134
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQF 191
+L + ++++GLP+ C ++V++F +I GI + GR +G A+++
Sbjct: 2 MLGAEGGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVEL 61
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMS 218
++ + AL + +E +GHR V + S
Sbjct: 62 ESEDEVKLALKKDRETMGHRYVEVFKS 88
>gi|194389792|dbj|BAG60412.1| unnamed protein product [Homo sapiens]
Length = 355
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ P+ + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 213 NFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELFLNSTAG 272
Query: 80 TS 81
TS
Sbjct: 273 TS 274
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQF 191
+LS + ++++GLP+ C ++V +F +I +GI + GR +G A+++
Sbjct: 2 MLSTEGREGFVVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVEL 61
Query: 192 VDKENA----EKALLRHKEKIGHRLVTLVMS 218
+E EKAL +HKE+IGHR + + S
Sbjct: 62 ESEEEVKLALEKALKKHKERIGHRYIEIFKS 92
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L + I I D GR TG A ++F E+A A+ +
Sbjct: 196 CVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPD--GRVTGEADVEFATHEDAVAAMAK 253
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 254 DKANMQHRYVELFLN 268
>gi|339253436|ref|XP_003371941.1| RNA-binding protein 35B [Trichinella spiralis]
gi|316967724|gb|EFV52114.1| RNA-binding protein 35B [Trichinella spiralis]
Length = 564
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 130 RQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYI 189
RQ V S + + R +GLP++ +DV +F GL I G+ + GR G A +
Sbjct: 384 RQDVVESSTVI-----RARGLPWQSSDQDVARFFVGLNIARGGVALCLSPQGRRNGEALV 438
Query: 190 QFVDKENAEKALLRHKEKIGHRLVTLVMSGAQWFLS 225
+F + E+ E AL RH+ +G R + + S + FL+
Sbjct: 439 RFENAEHRELALKRHRHFMGSRYIEVYRSTGEDFLN 474
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
GR +GEA V F + + + AL+RH+ MG RYIE+Y G
Sbjct: 430 GRRNGEALVRFENAEHRELALKRHRHFMGSRYIEVYRSTG 469
>gi|383276062|dbj|BAM09220.1| heterogenous nuclear ribonucleoprotein F, partial [Ursus thibetanus
japonicus]
Length = 150
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++ T
Sbjct: 85 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTG 144
Query: 82 SKEA 85
+
Sbjct: 145 ASNG 148
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY+ + D+ F L V I I D GR TG A ++F E A A+ +
Sbjct: 68 CVHMRGLPYKATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEEAVAAMSK 125
Query: 204 HKEKIGHRLVTLVMS 218
+ + HR + L ++
Sbjct: 126 DRANMQHRYIELFLN 140
>gi|109476157|ref|XP_001054639.1| PREDICTED: RNA-binding protein 12B-A-like [Rattus norvegicus]
Length = 843
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 19/199 (9%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS-SKEANGRGTGGFGGVKS 98
G +GEA + F++ +DA+RA+ R + D +EL++ K + + + G +
Sbjct: 37 GGKAGEAFIIFATDEDARRAISRSGGFIKDSSVELFLSSKVEMQKTIDMKRSARVGRGRP 96
Query: 99 TPYGVGIFCISQFLAKWMRRAKRSEMDWALK-RQGAVLSGSAVD------------QCCM 145
P G+ + F+ + S A+ G ++G+ +D +
Sbjct: 97 GPEASGVGNMYHFIDALKEEERYSGYGSAVNPDAGFHINGTGLDLRPRKTRPLKAENPYL 156
Query: 146 RLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHK 205
L+GLPY ++DV F GL + +G+ + + GR G A ++F +A L H+
Sbjct: 157 FLRGLPYLVNEDDVRVFFSGLCV--DGVILLKHHDGRNNGDAIVKFASCVDASGGLKCHR 214
Query: 206 EKIGHRLVTLVMSGA--QW 222
+G R + VM G+ QW
Sbjct: 215 SFMGSRFIE-VMQGSEQQW 232
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 83/197 (42%), Gaps = 19/197 (9%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF + ++LL GR++G+A V+F+S DA L+ H+S MG R+IE+ +G+
Sbjct: 173 FFSGLCVDGVILLKHHDGRNNGDAIVKFASCVDASGGLKCHRSFMGSRFIEVM--QGSEQ 230
Query: 83 KEANGRGTGGFGG----VKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
+ GT GG +S + ++ W R +S + G +
Sbjct: 231 QWIEFGGTASKGGDTLHKRSEEHSPSRRLNDRYF--WKRSRSKSPRTRSRSPLGFYV--- 285
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAE 198
L+ L K D+ ++ + I + R T A++ F ++++
Sbjct: 286 -------HLRNLSLHTNKRDLRYLFRDTDLSNDQIKFLYK-DDRRTRYAFVMFKNQKDYN 337
Query: 199 KALLRHKEKIGHRLVTL 215
AL HK + +R V +
Sbjct: 338 TALGLHKTVLQYRPVLI 354
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQGLP+ D+ F +GL I G+ + G G A+I F E+A +A+
Sbjct: 3 VVIRLQGLPFIAGPVDIRHFFKGLTIPDGGVHV----IGGKAGEAFIIFATDEDARRAIS 58
Query: 203 RHKEKIGHRLVTLVMS 218
R I V L +S
Sbjct: 59 RSGGFIKDSSVELFLS 74
>gi|344252227|gb|EGW08331.1| Heterogeneous nuclear ribonucleoprotein F [Cricetulus griseus]
Length = 185
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++ T
Sbjct: 77 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTG 136
Query: 82 SKEA 85
+
Sbjct: 137 ASNG 140
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY+ + D+ F L V I I D GR TG A ++F E A A+ +
Sbjct: 60 CVHMRGLPYKATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEEAVAAMSK 117
Query: 204 HKEKIGHRLVTLVMS 218
+ + HR + L ++
Sbjct: 118 DRANMQHRYIELFLN 132
>gi|340382975|ref|XP_003389993.1| PREDICTED: probable RNA-binding protein 19-like [Amphimedon
queenslandica]
Length = 866
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 38/62 (61%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF PI NI LL DD R SG A V+ S D + A++R+K MG RYIEL ++ G+
Sbjct: 264 KFFSPIQLSNIRLLKDDRERCSGLAFVDVMSETDLKEAMKRNKGRMGRRYIELVVDTGSK 323
Query: 82 SK 83
K
Sbjct: 324 EK 325
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+R++GLPY+ ++ V KF +++ + I + D RC+G+A++ + + + ++A+ R
Sbjct: 247 TIRMRGLPYDASEKHVHKFFSPIQL--SNIRLLKDDRERCSGLAFVDVMSETDLKEAMKR 304
Query: 204 HKEKIGHRLVTLVM 217
+K ++G R + LV+
Sbjct: 305 NKGRMGRRYIELVV 318
>gi|395849855|ref|XP_003797528.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Otolemur
garnettii]
Length = 243
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++ T
Sbjct: 135 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTG 194
Query: 82 SKEA 85
+
Sbjct: 195 ASNG 198
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 118 RAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPH 177
++ R+EMDW LK G + SA D +RL+GLP+ C KE++ +F G G +
Sbjct: 19 KSHRTEMDWVLKHSGPNSADSAND-GFVRLRGLPFGCTKEEIVQFFSGA-----GYSGYE 72
Query: 178 DYAGRCTGVAYI 189
+Y+G G +
Sbjct: 73 EYSGLSDGYGFT 84
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY+ + D+ F L V I I D GR TG A ++F E A A+ +
Sbjct: 118 CVHMRGLPYKATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEEAVAAMSK 175
Query: 204 HKEKIGHRLVTLVMS 218
+ + HR + L ++
Sbjct: 176 DRANMQHRYIELFLN 190
>gi|349605885|gb|AEQ00971.1| Heteroproteinous nuclear ribonucleoprotein H2-like protein, partial
[Equus caballus]
Length = 270
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ P+ + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 128 NFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELFLNSTAG 187
Query: 80 TS 81
TS
Sbjct: 188 TS 189
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L + I I D GR TG A ++F E+A A+ +
Sbjct: 111 CVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPD--GRVTGEADVEFATHEDAVAAMAK 168
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 169 DKANMQHRYVELFLN 183
>gi|449667958|ref|XP_002158900.2| PREDICTED: epithelial splicing regulatory protein 1-like [Hydra
magnipapillata]
Length = 503
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Query: 106 FC--ISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFL 163
FC ++Q L K + + E +L + +G D +R +GLP++ DV F
Sbjct: 177 FCAKVTQHLLKEGHKFLKLE-SVSLTLNDGMPTGYVKDDTIVRARGLPWQVSDVDVAAFF 235
Query: 164 EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGAQWF 223
GL I G+ + + GR G A ++F E+ + AL RHK + R + + AQ F
Sbjct: 236 TGLNIAKGGVALCLNVKGRRNGEALVRFESSEHRDMALRRHKHHLLGRYIEVYKGTAQEF 295
Query: 224 L 224
L
Sbjct: 296 L 296
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 48/186 (25%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR +GEA V F S + AL+RHK ++ RYIE+Y +GT
Sbjct: 253 GRRNGEALVRFESSEHRDMALRRHKHHLLGRYIEVY------------KGTA-------- 292
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++++ AK + G + +R++GLP++ DV
Sbjct: 293 -------------QEFLKIAKGPAAAMHAAAEFLTNGGEVI----IRMRGLPFDATVHDV 335
Query: 160 EKF-------LEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRL 212
+F L+G NG+ + G TG A++ F + + AL +H+E IG R
Sbjct: 336 VEFFGDSPKVLQG----KNGVMLISYPDGASTGDAFVLFETEAEGQFALKKHRENIGKRY 391
Query: 213 VTLVMS 218
V L S
Sbjct: 392 VELFRS 397
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 61/132 (46%), Gaps = 16/132 (12%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
++L++ G S+G+A V F + + Q AL++H+ N+G RY+EL+ ++
Sbjct: 352 VMLISYPDGASTGDAFVLFETEAEGQFALKKHRENIGKRYVELFRSTRAELQQVLTMYNI 411
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
G+ V P Q R+ ++ L+ + ++ C+R++GLP
Sbjct: 412 GYQLVTPVP--------GQLPFPGSGLNDRALINQRLQ--------ALMNMSCLRMRGLP 455
Query: 152 YECKKEDVEKFL 163
+ +D+ FL
Sbjct: 456 FSASHKDILNFL 467
>gi|62648675|ref|XP_232819.3| PREDICTED: RNA-binding protein 12B-A-like [Rattus norvegicus]
gi|109476143|ref|XP_001053414.1| PREDICTED: RNA-binding protein 12B-A-like [Rattus norvegicus]
Length = 843
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 19/199 (9%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS-SKEANGRGTGGFGGVKS 98
G +GEA + F++ +DA+RA+ R + D +EL++ K + + + G +
Sbjct: 37 GGKAGEAFIIFATDEDARRAISRSGGFIKDSSVELFLSSKVEMQKTIDMKRSARVGRGRP 96
Query: 99 TPYGVGIFCISQFLAKWMRRAKRSEMDWALK-RQGAVLSGSAVD------------QCCM 145
P G+ + F+ + S A+ G ++G+ +D +
Sbjct: 97 GPEASGVGNMYHFIDALKEEERYSGYGSAVNPDAGFHINGTGLDLRPRKTRPLKAENPYL 156
Query: 146 RLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHK 205
L+GLPY ++DV F GL + +G+ + + GR G A ++F +A L H+
Sbjct: 157 FLRGLPYLVNEDDVRVFFSGLCV--DGVILLKHHDGRNNGDAIVKFASCVDASGGLKCHR 214
Query: 206 EKIGHRLVTLVMSGA--QW 222
+G R + VM G+ QW
Sbjct: 215 SFMGSRFIE-VMQGSEQQW 232
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF + ++LL GR++G+A V+F+S DA L+ H+S MG R+IE+ +G+
Sbjct: 173 FFSGLCVDGVILLKHHDGRNNGDAIVKFASCVDASGGLKCHRSFMGSRFIEVM--QGSEQ 230
Query: 83 KEANGRGTGGFGG 95
+ GT GG
Sbjct: 231 QWIEFGGTASKGG 243
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQGLP+ D+ F +GL I G+ + G G A+I F E+A +A+
Sbjct: 3 VVIRLQGLPFIAGPVDIRHFFKGLTIPDGGVHV----IGGKAGEAFIIFATDEDARRAIS 58
Query: 203 RHKEKIGHRLVTLVMS 218
R I V L +S
Sbjct: 59 RSGGFIKDSSVELFLS 74
>gi|18605870|gb|AAH23162.1| Hnrpf protein, partial [Mus musculus]
Length = 188
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++ T
Sbjct: 80 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTG 139
Query: 82 SKEA 85
+
Sbjct: 140 ASNG 143
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY+ + D+ F L V I I D GR TG A ++F E A A+ +
Sbjct: 63 CVHMRGLPYKATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEEAVAAMSK 120
Query: 204 HKEKIGHRLVTLVMS 218
+ + HR + L ++
Sbjct: 121 DRANMQHRYIELFLN 135
>gi|328909179|gb|AEB61257.1| heterogeneous nuclear ribonucleoprotein F-like protein, partial
[Equus caballus]
Length = 113
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++ T
Sbjct: 6 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTG 65
Query: 82 SKEA 85
+
Sbjct: 66 ASNG 69
>gi|345325737|ref|XP_003430953.1| PREDICTED: G-rich sequence factor 1-like [Ornithorhynchus anatinus]
Length = 224
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F S +DA A+ + +S++ RYIEL++
Sbjct: 163 NFFSPLKPVRITMEYSSSGKATGEADVHFESHEDAVAAMAKDRSHVQHRYIELFL 217
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
G+A +R++GLP++ +D+ F L+ P IT+ + +G+ TG A + F E+
Sbjct: 139 GTAPSFHFVRMRGLPFQANAQDIVNFFSPLK--PVRITMEYSSSGKATGEADVHFESHED 196
Query: 197 AEKALLRHKEKIGHRLVTLVMS 218
A A+ + + + HR + L ++
Sbjct: 197 AVAAMAKDRSHVQHRYIELFLN 218
>gi|334327209|ref|XP_001378263.2| PREDICTED: heterogeneous nuclear ribonucleoprotein H2-like
[Monodelphis domestica]
Length = 231
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P PV + GR +GE DVEF++ +DA A+ + K+NM RY++L++ G
Sbjct: 109 NFFSPFNPVREHIEIGPDGRVTGEVDVEFATHEDAVAAMSKDKANMQHRYVKLFLNSTAG 168
Query: 80 TSSKEANGRGTGGFGGVKSTPYG 102
SS + GG G + YG
Sbjct: 169 ASSGAYGSQMMGGMGLSNQSSYG 191
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F V I I D GR TG ++F E+A A+ +
Sbjct: 92 CVHMRGLPYRVTENDIYNFFSPFNPVREHIEIGPD--GRVTGEVDVEFATHEDAVAAMSK 149
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 150 DKANMQHRYVKLFLN 164
>gi|334188661|ref|NP_001190629.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332010758|gb|AED98141.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 158
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 23/158 (14%)
Query: 59 ALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFG-GVKSTPYGVGIFCISQFLAKWMR 117
ALQR + NMG RY+E++ A G + V+++P G ++ R
Sbjct: 6 ALQRDRHNMGRRYVEVFRCSKQDYYNAVAAEEGAYEYEVRASPPPTG-------PSRAKR 58
Query: 118 RAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPH 177
+++ ++++ ++++GLPY K + +F G +++ + +
Sbjct: 59 FSEKEKLEYTE---------------VLKMRGLPYSVNKPQIIEFFSGYKVIQGRVQVVC 103
Query: 178 DYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTL 215
G+ TG A+++F E A +A+ + K IG R V L
Sbjct: 104 RPDGKATGEAFVEFETGEEARRAMAKDKMSIGSRYVEL 141
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 29/36 (80%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
G+++GEA VEF + ++A+RA+ + K ++G RY+EL+
Sbjct: 107 GKATGEAFVEFETGEEARRAMAKDKMSIGSRYVELF 142
>gi|291388277|ref|XP_002710735.1| PREDICTED: RNA binding motif protein 12-like [Oryctolagus
cuniculus]
Length = 864
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 100/254 (39%), Gaps = 40/254 (15%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY------MEEGTSSKEAN--GRGTG 91
G GEA + F++ +DA+RA+ R + D +EL+ M++ K + GRG
Sbjct: 37 GGDVGEAFIIFATDEDARRAISRSGGYIKDSSVELFLSSRAEMQKTIQMKRTDRVGRGRP 96
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMR----- 146
G G G+ +S F+ A S ++ Q A + +R
Sbjct: 97 GSG-------ASGVGSMSNFIEAIKEDANNSGYGSSIN-QDAGFHANGTGHNDLRPRKTR 148
Query: 147 ----------LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
L+GLPY ++DV F GL + +G+ + GR G A ++F +
Sbjct: 149 PLKAENPYLFLRGLPYLVNEDDVRVFFSGLCV--DGVIFLKHHDGRNNGDAIVKFASCVD 206
Query: 197 AEKALLRHKEKIGHRLVTLVMSGA--QWF-LSPPLTNETPISRLDLTGSPVRST---ICV 250
A L H+ +G R + VM G+ QW L E + SP R
Sbjct: 207 ASGGLKCHRSFMGSRFIE-VMQGSEEQWIELGGNTIKEDDVPMRSEEHSPARGIDRHFRK 265
Query: 251 LCHPLTPRSVRPRS 264
H +PR R RS
Sbjct: 266 RSHSKSPRRTRSRS 279
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 136 SGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
G + + C+ ++ P++ K +V+KF + + I + +D G G A ++F +E
Sbjct: 392 EGYSGQKLCIYIRNFPFDVTKVEVQKFFADFSLAEDDIYLLYDDKGVGLGEALVKFKSEE 451
Query: 196 NAEKA-LLRHKEKIGHRLVTLVMSGAQ 221
A KA L + +G ++ ++S AQ
Sbjct: 452 QATKAERLNRRRFLGTEVLLRLISEAQ 478
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIEL 74
FF + ++ L GR++G+A V+F+S DA L+ H+S MG R+IE+
Sbjct: 174 FFSGLCVDGVIFLKHHDGRNNGDAIVKFASCVDASGGLKCHRSFMGSRFIEV 225
>gi|301609832|ref|XP_002934459.1| PREDICTED: RNA-binding protein 12B-like isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 683
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 26/214 (12%)
Query: 39 AGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME---EGTSSKEANGRGTGGFGG 95
G GEA + F++ +DA+RA+ R + IEL++ E + E N +G G
Sbjct: 60 TGGKIGEAFIIFATDEDARRAMSRSGGFIKKSRIELFLSSKAEMQHTLEMNRKGNKDLG- 118
Query: 96 VKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMR--------- 146
TP + + + A +S ++ GA + + + +
Sbjct: 119 --PTPDISKLLNVMKKGIYQKNMANKSNVEAGFDSSGAKYTEENMPRPKYQGKKDIWPLK 176
Query: 147 --------LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAE 198
L GLPY + DV++F G +V ++ + G G AY++F ++A+
Sbjct: 177 DNGYGYVFLYGLPYTAGELDVKEFFHGFNVVDLHFSVRQN--GVRDGNAYVKFGSVQDAQ 234
Query: 199 KALLRHKEKIGHRLVTLVMSGAQ-WFLSPPLTNE 231
AL R E IGHR + + + Q W + T+E
Sbjct: 235 AALSRDNEYIGHRYICVKLCNEQKWIEAGGPTDE 268
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 43/101 (42%), Gaps = 14/101 (13%)
Query: 128 LKRQGAVLSGSAV--DQCC--------MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPH 177
L R A +G V D+ C +RLQGLP D+ F GL I G+ I
Sbjct: 2 LSRAMATRTGKIVKCDKSCHILRMAVVIRLQGLPVVAGSTDIRHFFSGLHIPDGGVHI-- 59
Query: 178 DYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
G G A+I F E+A +A+ R I + L +S
Sbjct: 60 --TGGKIGEAFIIFATDEDARRAMSRSGGFIKKSRIELFLS 98
>gi|301609834|ref|XP_002934460.1| PREDICTED: RNA-binding protein 12B-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 659
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 26/214 (12%)
Query: 39 AGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME---EGTSSKEANGRGTGGFGG 95
G GEA + F++ +DA+RA+ R + IEL++ E + E N +G G
Sbjct: 36 TGGKIGEAFIIFATDEDARRAMSRSGGFIKKSRIELFLSSKAEMQHTLEMNRKGNKDLG- 94
Query: 96 VKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMR--------- 146
TP + + + A +S ++ GA + + + +
Sbjct: 95 --PTPDISKLLNVMKKGIYQKNMANKSNVEAGFDSSGAKYTEENMPRPKYQGKKDIWPLK 152
Query: 147 --------LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAE 198
L GLPY + DV++F G +V ++ + G G AY++F ++A+
Sbjct: 153 DNGYGYVFLYGLPYTAGELDVKEFFHGFNVVDLHFSVRQN--GVRDGNAYVKFGSVQDAQ 210
Query: 199 KALLRHKEKIGHRLVTLVMSGAQ-WFLSPPLTNE 231
AL R E IGHR + + + Q W + T+E
Sbjct: 211 AALSRDNEYIGHRYICVKLCNEQKWIEAGGPTDE 244
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQGLP D+ F GL I G+ I G G A+I F E+A +A+
Sbjct: 3 VVIRLQGLPVVAGSTDIRHFFSGLHIPDGGVHI----TGGKIGEAFIIFATDEDARRAMS 58
Query: 203 RHKEKIGHRLVTLVMS 218
R I + L +S
Sbjct: 59 RSGGFIKKSRIELFLS 74
>gi|297830788|ref|XP_002883276.1| hypothetical protein ARALYDRAFT_318838 [Arabidopsis lyrata subsp.
lyrata]
gi|297329116|gb|EFH59535.1| hypothetical protein ARALYDRAFT_318838 [Arabidopsis lyrata subsp.
lyrata]
Length = 356
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 45/78 (57%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP+ KED+ F + E+ + + + + GR TG A+++F + E + A+++
Sbjct: 269 TLRLRGLPFSAGKEDILDFFKDFELSEDSVHVTVNGEGRPTGEAFVEFRNAEESRAAMVK 328
Query: 204 HKEKIGHRLVTLVMSGAQ 221
++ +G R + L S +
Sbjct: 329 DRKTLGSRYIELFPSSVE 346
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 146 RLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHK 205
RL+GLP++C + DV +F GL++V + H + TG A+ + AL +++
Sbjct: 124 RLRGLPFDCAEIDVVEFFHGLDVV--DVLFVHK-NNKVTGEAFCVLGYPLQVDFALQKNR 180
Query: 206 EKIGHRLVTLVMSGAQWFLSPPLTNETPISRL 237
+ +G R V + S Q + + NE SR+
Sbjct: 181 QNMGRRYVEVFRSTKQEYYK-AIANEVAESRV 211
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%)
Query: 31 NILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRG 89
++ + + GR +GEA VEF + ++++ A+ + + +G RYIEL+ +EA RG
Sbjct: 297 SVHVTVNGEGRPTGEAFVEFRNAEESRAAMVKDRKTLGSRYIELFPSSVEELEEALSRG 355
>gi|147832351|emb|CAN73277.1| hypothetical protein VITISV_031233 [Vitis vinifera]
Length = 260
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%)
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENA 197
SA +RL+GLP+ KED+ F + + + I + + GR TG A+++F + E++
Sbjct: 167 SAEHTGVLRLRGLPFSASKEDIMDFFKDFVLSEDSIHMTVNSEGRPTGEAFVEFTNAEDS 226
Query: 198 EKALLRHKEKIGHRLVTLVMS 218
+ A+ + + +G R + L S
Sbjct: 227 KAAMAKDRMTLGSRYIELFPS 247
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 22 QFFKPIV--PVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
FFK V +I + + GR +GEA VEF++ +D++ A+ + + +G RYIEL+
Sbjct: 190 DFFKDFVLSEDSIHMTVNSEGRPTGEAFVEFTNAEDSKAAMAKDRMTLGSRYIELFPSSL 249
Query: 80 TSSKEANGRG 89
EA RG
Sbjct: 250 EELDEAVARG 259
>gi|334185502|ref|NP_188725.3| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|332642915|gb|AEE76436.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
Length = 292
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 46/78 (58%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP+ KED+ F + E+ + + + + GR TG A+++F + E++ A+++
Sbjct: 205 ILRLRGLPFSAGKEDILDFFKDFELSEDFVHVTVNGEGRPTGEAFVEFRNAEDSRAAMVK 264
Query: 204 HKEKIGHRLVTLVMSGAQ 221
++ +G R + L S +
Sbjct: 265 DRKTLGSRYIELFPSSVE 282
Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 146 RLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHK 205
RL+GLP++C + DV +F GL++V + H + TG A+ + AL +++
Sbjct: 60 RLRGLPFDCAELDVVEFFHGLDVV--DVLFVH-RNNKVTGEAFCVLGYPLQVDFALQKNR 116
Query: 206 EKIGHRLVTLVMSGAQWFLSPPLTNETPISRL 237
+ +G R V + S Q + + NE SR+
Sbjct: 117 QNMGRRYVEVFRSTKQEYYK-AIANEVAESRV 147
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRG 89
+ + + GR +GEA VEF + +D++ A+ + + +G RYIEL+ +EA RG
Sbjct: 234 VHVTVNGEGRPTGEAFVEFRNAEDSRAAMVKDRKTLGSRYIELFPSSVEELEEALSRG 291
>gi|9294416|dbj|BAB02497.1| unnamed protein product [Arabidopsis thaliana]
Length = 278
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 46/78 (58%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP+ KED+ F + E+ + + + + GR TG A+++F + E++ A+++
Sbjct: 191 ILRLRGLPFSAGKEDILDFFKDFELSEDFVHVTVNGEGRPTGEAFVEFRNAEDSRAAMVK 250
Query: 204 HKEKIGHRLVTLVMSGAQ 221
++ +G R + L S +
Sbjct: 251 DRKTLGSRYIELFPSSVE 268
Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRG 89
+ + + GR +GEA VEF + +D++ A+ + + +G RYIEL+ +EA RG
Sbjct: 220 VHVTVNGEGRPTGEAFVEFRNAEDSRAAMVKDRKTLGSRYIELFPSSVEELEEALSRG 277
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 146 RLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHK 205
RL+GLP++C + DV +F GL++V + H + TG A+ + AL +++
Sbjct: 46 RLRGLPFDCAELDVVEFFHGLDVV--DVLFVH-RNNKVTGEAFCVLGYPLQVDFALQKNR 102
Query: 206 EKIGHRLVTLVMSGAQWFLSPPLTNETPISRL 237
+ +G R V + S Q + + NE SR+
Sbjct: 103 QNMGRRYVEVFRSTKQEYYK-AIANEVAESRV 133
>gi|195021602|ref|XP_001985427.1| GH14505 [Drosophila grimshawi]
gi|193898909|gb|EDV97775.1| GH14505 [Drosophila grimshawi]
Length = 1049
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%)
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
+ C +++ G+ D+ K+ GL I NGI I G TG+AYI+F +A+K
Sbjct: 407 AETCYIKISGMCPSTSYSDLRKYFAGLYIPHNGIKIISGANGTRTGIAYIEFSRVSSAQK 466
Query: 200 ALLRHKEKIGHRLVTLVMSGAQWF 223
ALLR+ RLV + G + F
Sbjct: 467 ALLRNNTMFRDRLVQITPIGDEEF 490
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQ LP+ D+ F GL I G+ I G G A+I F E+A A+L
Sbjct: 3 VIIRLQNLPWTANARDIRNFFTGLAIPEGGVHI----IGGEMGDAFIAFSTDEDARCAML 58
Query: 203 RHKEKIGHRLVTLVMS 218
+ +EK+ V L++S
Sbjct: 59 KDREKLMEVQVRLLLS 74
>gi|402585392|gb|EJW79332.1| hypothetical protein WUBG_09760 [Wuchereria bancrofti]
Length = 236
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 72/189 (38%), Gaps = 39/189 (20%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF + +I GR+SGE VE + + A + ++ + RYIE
Sbjct: 29 FFFGLNAKSITFTLTSNGRASGECYVELDDQEAVKEAQKLDRNEINGRYIE--------- 79
Query: 83 KEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQ 142
+F +S M R +K G
Sbjct: 80 ----------------------VFSVSDAELLMMIR------HGVIKGSGGDADSRYASN 111
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RL+GLPY +D+++F GLE+ I + GR +G A+++ KE AE AL
Sbjct: 112 FVVRLRGLPYSATIDDIKEFFSGLEVAD--AVIDKEPGGRPSGEAFVRLATKEYAELALE 169
Query: 203 RHKEKIGHR 211
R K +G R
Sbjct: 170 RSKNYMGSR 178
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG--ITIPHDYAGRCTGVAYIQFVDKENAE 198
D +RL+GLP+ K++DV FL+ N IT GR +G Y++ D+E +
Sbjct: 4 DTNYIRLRGLPFAAKEQDVRDFLQVFFFGLNAKSITFTLTSNGRASGECYVELDDQEAVK 63
Query: 199 KALLRHKEKIGHRLVTL 215
+A + +I R + +
Sbjct: 64 EAQKLDRNEINGRYIEV 80
>gi|388504640|gb|AFK40386.1| unknown [Medicago truncatula]
Length = 259
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 85/199 (42%), Gaps = 25/199 (12%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
++FF + V++L + G+ SGE ALQR++ N+G RY+E++ +
Sbjct: 73 VAEFFHGLDIVDVLFVHK-GGKFSGEGFCVLGYPLQVDFALQRNRQNIGRRYVEVFRSK- 130
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA 139
+ Y +S RR+ + + A +G
Sbjct: 131 -----------------RQEYYKAIANEVSDARGGSPRRSAPRAKPYDEGKDSAEHTG-- 171
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
+RL+GLP+ K+D+ F + + + I I + GR G AY++F + ++++
Sbjct: 172 ----VLRLRGLPFFANKDDIMDFFKEYVLSEDSIHIVMNSEGRPFGEAYVEFENADDSKA 227
Query: 200 ALLRHKEKIGHRLVTLVMS 218
A+ + + +G R + L S
Sbjct: 228 AMAKDRMTLGSRYIELFPS 246
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP++C + DV +F GL+IV + H G+ +G + + AL R
Sbjct: 58 VVRLRGLPFDCTETDVAEFFHGLDIVD--VLFVHK-GGKFSGEGFCVLGYPLQVDFALQR 114
Query: 204 HKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVRST 247
+++ IG R V + S Q + + NE +R GSP RS
Sbjct: 115 NRQNIGRRYVEVFRSKRQEYYK-AIANEVSDAR---GGSPRRSA 154
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 22 QFFKPIV--PVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
FFK V +I ++ + GR GEA VEF + DD++ A+ + + +G RYIEL+
Sbjct: 189 DFFKEYVLSEDSIHIVMNSEGRPFGEAYVEFENADDSKAAMAKDRMTLGSRYIELFPSTH 248
Query: 80 TSSKEANGRG 89
++A RG
Sbjct: 249 GEMEDAISRG 258
>gi|126324467|ref|XP_001378428.1| PREDICTED: probable RNA-binding protein 19 [Monodelphis domestica]
Length = 969
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+F P+ P+ I ++ + G +G V+F+S D ++AL+R+K MG RYIE++ E+GT
Sbjct: 299 EFLLPLKPMAIRIVRNAHGNKTGYVFVDFNSEGDVEKALKRNKDYMGGRYIEVFREKGTQ 358
Query: 82 SKEANGRGT 90
+ +G
Sbjct: 359 GTPTHQKGN 367
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 131 QGAVLSGSA-VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYI 189
QG V + +A ++L+G P+ +++V +FL L + P I I + G TG ++
Sbjct: 268 QGEVRNVTAPTTAYTVKLRGAPFNVTEQNVREFL--LPLKPMAIRIVRNAHGNKTGYVFV 325
Query: 190 QFVDKENAEKALLRHKEKIGHRLVTL 215
F + + EKAL R+K+ +G R + +
Sbjct: 326 DFNSEGDVEKALKRNKDYMGGRYIEV 351
>gi|422294318|gb|EKU21618.1| rna binding protein [Nannochloropsis gaditana CCMP526]
Length = 302
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 75/184 (40%), Gaps = 50/184 (27%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELYMEE------G 79
+ P + + GR +GEA V F + +DA A + +K M +R+I+LY+
Sbjct: 113 VAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTS 172
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA 139
T G+ GG +TP
Sbjct: 173 TVHSPIVGQAHGGCPVYANTP--------------------------------------- 193
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
C RL+G+P +E++ +F GL+++ G+ I D +GR TG AY +F ++ ++
Sbjct: 194 --MTCARLRGVPSTVTEEELFRFFAGLQVI--GLYICRDSSGRATGEAYAEFGSLDDCQQ 249
Query: 200 ALLR 203
A+ R
Sbjct: 250 AMSR 253
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 102/251 (40%), Gaps = 48/251 (19%)
Query: 22 QFFKPIVPV--NILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
FF + P I + GRSSGEA V S + ++AL + K MG R+++++
Sbjct: 5 HFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIF---- 60
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA 139
+S P + S+ A + + ++ +A
Sbjct: 61 -----------------ESHPGEL----FSRVGAAAVTLGAKDDVGYA------------ 87
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
++++GLP++ DV + + P+G+ I GR TG AY+ F E+A
Sbjct: 88 ---GVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVA 144
Query: 200 AL-LRHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVRSTICVLCHPLTPR 258
A +K+ + +R + L ++ + T +PI G PV + + C L R
Sbjct: 145 AREALNKQTMNNRWIDLYLASKGDVYTS--TVHSPIVGQAHGGCPVYANTPMTCARL--R 200
Query: 259 SVRPRSVRQSE 269
V P +V + E
Sbjct: 201 GV-PSTVTEEE 210
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQR 62
+FF + + + + D +GR++GEA EF S+DD Q+A+ R
Sbjct: 213 RFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSR 253
>gi|195175076|ref|XP_002028289.1| GL16722 [Drosophila persimilis]
gi|194117421|gb|EDW39464.1| GL16722 [Drosophila persimilis]
Length = 1044
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 135 LSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDK 194
+S + D C +++ G+ D+ K+ +GL I NGI I G TGVAYI+F
Sbjct: 383 MSSAVADTCYVKISGMCQNTSYSDLRKYFQGLYIPHNGIKI-MTVNGSRTGVAYIEFSRV 441
Query: 195 ENAEKALLRHKEKIGHRLVTLVMSGAQWF 223
+A+KAL R+ R V +V G F
Sbjct: 442 SSAQKALQRNNTMFRDRQVQIVPIGDAEF 470
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQ LP+ D+ F GL I G+ I G G A+I F E+A A+L
Sbjct: 3 VIIRLQNLPWTANARDIRNFFTGLSIPEGGVHI----IGGEMGDAFIAFSTDEDARCAML 58
Query: 203 RHKEKIGHRLVTLVMS 218
+ +EK+ V L++S
Sbjct: 59 KDREKLMEIQVRLLLS 74
>gi|198465484|ref|XP_001353649.2| GA20654 [Drosophila pseudoobscura pseudoobscura]
gi|198150179|gb|EAL31163.2| GA20654 [Drosophila pseudoobscura pseudoobscura]
Length = 1043
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 135 LSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDK 194
+S + D C +++ G+ D+ K+ +GL I NGI I G TGVAYI+F
Sbjct: 383 MSSAVADTCYVKISGMCQNTSYSDLRKYFQGLYIPHNGIKI-MTVNGSRTGVAYIEFSRV 441
Query: 195 ENAEKALLRHKEKIGHRLVTLVMSGAQWF 223
+A+KAL R+ R V +V G F
Sbjct: 442 SSAQKALQRNNTMFRDRQVQIVPIGDAEF 470
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQ LP+ D+ F GL I G+ I G G A+I F E+A A+L
Sbjct: 3 VIIRLQNLPWTANARDIRNFFTGLSIPEGGVHI----IGGEMGDAFIAFSTDEDARCAML 58
Query: 203 RHKEKIGHRLVTLVMS 218
+ +EK+ V L++S
Sbjct: 59 KDREKLMEIQVRLLLS 74
>gi|440797920|gb|ELR18994.1| fibronectin type III domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 740
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D ++++GLP+E ED+ +F L+I P G++I ++ GR TG ++ F ++A A
Sbjct: 678 DARVVKMRGLPWEVTPEDIARFFATLDIAPEGVSIALNFDGRPTGDGFVCFASADHATLA 737
Query: 201 LLR 203
L R
Sbjct: 738 LQR 740
>gi|159469283|ref|XP_001692797.1| splicing factor [Chlamydomonas reinhardtii]
gi|158278050|gb|EDP03816.1| splicing factor [Chlamydomonas reinhardtii]
Length = 647
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 83/205 (40%), Gaps = 60/205 (29%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELYMEEGT 80
QFF V +++ AGRS+GE V+ SV A A+ + H+ +G RYIE++
Sbjct: 44 QFFADF-EVATVVIGKRAGRSTGEGYVQLDSVAAAADAIAKLHRQTLGHRYIEVF----- 97
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+ +E D A + LS +
Sbjct: 98 ---------------------------------------ESTEADLATAKS---LSVDRM 115
Query: 141 DQCCMRLQGLPYECKKEDVEKF-------LEGLEIVPNGITIPHDYAGRCTGVAYIQFVD 193
+R +GLPY +DV F + G+E G+ + GR TG A+++
Sbjct: 116 RGFVIRCRGLPYTSTAQDVLNFFGADVPIVRGIE----GVVFTYAPDGRPTGEAFVELQT 171
Query: 194 KENAEKALLRHKEKIGHRLVTLVMS 218
+E +AL +HKE +G R + L +S
Sbjct: 172 EEAQREALKKHKESLGSRYIELFVS 196
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENA 197
S +RL+GLP+ ++DV +F E+ + AGR TG Y+Q A
Sbjct: 21 SVPKSTVLRLRGLPFSAGEDDVRQFFADFEV---ATVVIGKRAGRSTGEGYVQLDSVAAA 77
Query: 198 EKALLR-HKEKIGHRLVTLVMS 218
A+ + H++ +GHR + + S
Sbjct: 78 ADAIAKLHRQTLGHRYIEVFES 99
>gi|195586962|ref|XP_002083236.1| GD13466 [Drosophila simulans]
gi|194195245|gb|EDX08821.1| GD13466 [Drosophila simulans]
Length = 986
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
D C +R+ G+ D+ K+ +GL I NGI I G TGVAY++F +A+K
Sbjct: 354 ADTCYIRMSGMCQNTSYSDIRKYFQGLYIPHNGIKI-MMVNGSRTGVAYVEFSRVSSAQK 412
Query: 200 ALLRHKEKIGHRLVTLVMSGAQWF 223
A+ R+ RLV +V G F
Sbjct: 413 AVQRNNTMFRDRLVQIVPVGDDEF 436
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQ LP+ D+ F GL I G+ I G G A+I F E+A A+L
Sbjct: 3 VIIRLQNLPWTANARDIRNFFSGLSIPEGGVHI----IGGEMGDAFIAFSTDEDARCAML 58
Query: 203 RHKEKIGHRLVTLVMS 218
+ +EK+ V L++S
Sbjct: 59 KDREKLMEIQVRLLLS 74
>gi|195336616|ref|XP_002034931.1| GM14203 [Drosophila sechellia]
gi|194128024|gb|EDW50067.1| GM14203 [Drosophila sechellia]
Length = 987
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
D C +R+ G+ D+ K+ +GL I NGI I G TGVAY++F +A+K
Sbjct: 355 ADTCYIRMSGMCQNTSYSDIRKYFQGLYIPHNGIKI-MMVNGSRTGVAYVEFSRVSSAQK 413
Query: 200 ALLRHKEKIGHRLVTLVMSGAQWF 223
A+ R+ RLV +V G F
Sbjct: 414 AVQRNNTMFRDRLVQIVPVGDDEF 437
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQ LP+ D+ F GL I G+ I G G A+I F E+A A+L
Sbjct: 3 VIIRLQNLPWTANARDIRNFFSGLSIPEGGVHI----IGGEMGDAFIAFSTDEDARCAML 58
Query: 203 RHKEKIGHRLVTLVMS 218
+ +EK+ V L++S
Sbjct: 59 KDREKLMEIQVRLLLS 74
>gi|195127149|ref|XP_002008031.1| GI13280 [Drosophila mojavensis]
gi|193919640|gb|EDW18507.1| GI13280 [Drosophila mojavensis]
Length = 1101
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%)
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
+ C +++ G+ D+ K+ GL I NGI I G TGVAYI+F +A+K
Sbjct: 422 AETCYIKISGMCPSTSYSDLRKYFAGLYIPHNGIKIVSGPNGTRTGVAYIEFSRVSSAQK 481
Query: 200 ALLRHKEKIGHRLVTLVMSGAQWF 223
ALLR+ RLV +V + F
Sbjct: 482 ALLRNNTLFRDRLVQIVPISDEEF 505
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQ LP+ D+ F GL I G+ I G G A+I F E+A A+L
Sbjct: 3 VIIRLQNLPWTANARDIRNFFTGLSIPEGGVHI----IGGEMGDAFIAFSTDEDARCAML 58
Query: 203 RHKEKIGHRLVTLVMS 218
+ +EK+ V L++S
Sbjct: 59 KDREKLMEIQVRLLLS 74
>gi|195490443|ref|XP_002093142.1| GE20949 [Drosophila yakuba]
gi|194179243|gb|EDW92854.1| GE20949 [Drosophila yakuba]
Length = 1002
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
D C +R+ G+ D+ K+ +GL I NGI I G TGVAY++F +A+K
Sbjct: 351 ADTCYIRMSGMCQNTSYSDIRKYFQGLYIPHNGIKI-MMVNGSRTGVAYVEFSRVSSAQK 409
Query: 200 ALLRHKEKIGHRLVTLVMSGAQWF 223
A+ R+ RLV +V G F
Sbjct: 410 AVQRNNTMFRDRLVQIVPVGDDEF 433
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQ LP+ D+ F GL I G+ I G G A+I F E+A A+L
Sbjct: 3 VIIRLQNLPWTANARDIRNFFTGLSIPEGGVHI----IGGEMGDAFIAFSTDEDARCAML 58
Query: 203 RHKEKIGHRLVTLVMS 218
+ +EK+ V L++S
Sbjct: 59 KDREKLMEIQVRLLLS 74
>gi|194864880|ref|XP_001971153.1| GG14589 [Drosophila erecta]
gi|190652936|gb|EDV50179.1| GG14589 [Drosophila erecta]
Length = 995
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
D C +R+ G+ D+ K+ +GL I NGI I G TGVAY++F +A+K
Sbjct: 355 ADTCYIRMSGMCQNTSYSDIRKYFQGLYIPHNGIKI-MMVNGSRTGVAYVEFSRVSSAQK 413
Query: 200 ALLRHKEKIGHRLVTLVMSGAQWF 223
AL R+ RLV + G F
Sbjct: 414 ALQRNNTMFRDRLVQIAPVGDDEF 437
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQ LP+ D+ F GL I G+ I G G A+I F E+A A+L
Sbjct: 3 VIIRLQNLPWTANARDIRNFFSGLSIPEGGVHI----IGGEMGDAFIAFSTDEDARCAML 58
Query: 203 RHKEKIGHRLVTLVMS 218
+ +EK+ V L++S
Sbjct: 59 KDREKLMEIQVRLLLS 74
>gi|328874866|gb|EGG23231.1| hypothetical protein DFA_05363 [Dictyostelium fasciculatum]
Length = 939
Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
++L+GLP+ + D+ F GL+IV GI I + R G+AY+ F + ++ +AL R+
Sbjct: 801 VKLRGLPFTTTESDISTFFNGLDIVQGGIKIVYQ-RDRPMGIAYVTFTNSDDYHQALSRN 859
Query: 205 KEKIGHRLVTLVMSGAQ 221
+ +G R + + S ++
Sbjct: 860 NQHLGPRYIEVFPSTSK 876
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIEL 74
+FF+P+ I + + G+ +G+A VEF++ +DA +L RHK MG RYIE+
Sbjct: 449 EFFQPLDVSFIDIFYNSNGKQTGDASVEFATEEDANLSLDRHKQMMGTRYIEV 501
Score = 45.4 bits (106), Expect = 0.032, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 26 PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELY 75
PI NIL+ +D GR SGEA VEF + D AQ AL M RYIE +
Sbjct: 569 PIKSNNILMTMNDEGRFSGEAYVEFQTSDIAQAALSNLQNKTMMSRYIEFF 619
Score = 45.1 bits (105), Expect = 0.035, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
++L+GLP+ D+ KFL G I N I + + GR +G AY++F + A+ AL
Sbjct: 547 LKLRGLPFSISTMDIRKFLNGYPIKSNNILMTMNDEGRFSGEAYVEFQTSDIAQAAL 603
Score = 43.9 bits (102), Expect = 0.091, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKE 206
L+GLP+ ++ V +F + L++ + I I ++ G+ TG A ++F +E+A +L RHK+
Sbjct: 435 LRGLPWGVSEDAVREFFQPLDV--SFIDIFYNSNGKQTGDASVEFATEEDANLSLDRHKQ 492
Query: 207 KIGHRLVTLV 216
+G R + ++
Sbjct: 493 MMGTRYIEVI 502
>gi|74355899|gb|AAI03655.1| Grsf1 protein, partial [Rattus norvegicus]
Length = 142
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 81 NFFAPLKPVRITMEYSSSGKATGEADVHFDTHEDAVAAMLKDRSHVQHRYIELFL 135
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 129 KRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAY 188
K AV G+ + ++GLP++ +D+ F L+ P IT+ + +G+ TG A
Sbjct: 49 KLAEAVDFGAVPSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEAD 106
Query: 189 IQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+ F E+A A+L+ + + HR + L ++
Sbjct: 107 VHFDTHEDAVAAMLKDRSHVQHRYIELFLNS 137
>gi|221507828|gb|EEE33415.1| RNA recognition motif-containing protein, putative [Toxoplasma
gondii VEG]
Length = 510
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 91/198 (45%), Gaps = 36/198 (18%)
Query: 23 FFKPIVPV---NILLLTDDAGRSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELYMEE 78
FFKP+V + N+L+ R++GEA V+ ++A++ H +G R+IE++
Sbjct: 71 FFKPVVALENDNVLICIGFDKRTTGEAYVQLPDPGLREQAIKDLHGRLLGTRWIEVFRAS 130
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
++A+ R +++ M ++ +
Sbjct: 131 EEEFQKADDR-------------------------------RKTVMAAISGNTDSLDASR 159
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAE 198
++ ++L+GLP+ C + ++ +F +G +I + + + GR +G+A+++ + AE
Sbjct: 160 RMNLNVVKLRGLPWSCSENEIVRFFKGFDIHSDDVVLGVTGDGRLSGIAFVELPSPDVAE 219
Query: 199 KAL-LRHKEKIGHRLVTL 215
KA + HK+ +G R + +
Sbjct: 220 KAREVLHKKYMGRRFIEV 237
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 8/82 (9%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLE---IVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+RL+GLPY ++ + +F G I+P+ TIP D GR +G AY+QFVD A +A
Sbjct: 412 VLRLRGLPYSANEQHIVQFFHGFHMAAILPS--TIPID--GRPSGEAYVQFVDAAEALRA 467
Query: 201 L-LRHKEKIGHRLVTLVMSGAQ 221
++ ++ R++ L S Q
Sbjct: 468 FQAKNGGRMDKRMIELFPSSKQ 489
>gi|403372892|gb|EJY86355.1| hypothetical protein OXYTRI_15124 [Oxytricha trifallax]
Length = 635
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 92/196 (46%), Gaps = 46/196 (23%)
Query: 40 GRSSGEADVEFSSVDDAQRALQ-RHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKS 98
G +GE + F S +D+++A Q R ++G R+IELY
Sbjct: 483 GLLTGEGAILFHSEEDSKKAFQQRQGQSIGHRWIELYQ---------------------- 520
Query: 99 TPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKED 158
+ I F + M++ +R+ + G ++ S ++ M+L+GLP++ + +D
Sbjct: 521 ----ITIADYQNF--EEMQKQRRT------VKLGKYITDSNRERI-MKLRGLPFQVQPDD 567
Query: 159 VEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKIGHRLVTLVM 217
+ +F + ++ + + I + G+ TG + F D+E A++A +++KIG+R V +
Sbjct: 568 ITRFFKDYQVTKSDVVI-EEINGKKTGFGLVFFKDQETAQQAQENMNRKKIGNRYVEI-- 624
Query: 218 SGAQWFLSPPLTNETP 233
+ P +T+ P
Sbjct: 625 ------MEPTITDMMP 634
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D ++L+GLP+ K++++ +F V + + + G TG I F +E+++KA
Sbjct: 443 DYLGLKLRGLPFSIKRDEINQFFSNFNYVRDSVKLGRTGEGLLTGEGAILFHSEEDSKKA 502
Query: 201 L-LRHKEKIGHRLVTL 215
R + IGHR + L
Sbjct: 503 FQQRQGQSIGHRWIEL 518
>gi|195376909|ref|XP_002047235.1| GJ12048 [Drosophila virilis]
gi|194154393|gb|EDW69577.1| GJ12048 [Drosophila virilis]
Length = 1091
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
+ C +++ G+ D+ K+ GL I NGI I + G TG+AY++F +A+K
Sbjct: 439 AETCYIKISGMCPSTSYSDLRKYFAGLYIPHNGIKIVNGANGTRTGIAYVEFSRVSSAQK 498
Query: 200 ALLRHKEKIGHRLVTLV 216
A+LR+ RLV +V
Sbjct: 499 AVLRNNTMFRDRLVQIV 515
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQ LP+ D+ F GL I G+ I G G A+I F E+A A+L
Sbjct: 3 VIIRLQNLPWTANARDIRNFFTGLSIPEGGVHI----IGGEMGDAFIAFSTDEDARCAML 58
Query: 203 RHKEKIGHRLVTLVMS 218
+ +EK+ V L++S
Sbjct: 59 KDREKLMEVQVRLLLS 74
>gi|195439718|ref|XP_002067706.1| GK12567 [Drosophila willistoni]
gi|194163791|gb|EDW78692.1| GK12567 [Drosophila willistoni]
Length = 1092
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
D C +++ G+ D+ K+ GL I NGI I + R TGVAY++F +A+K
Sbjct: 398 ADTCYIKISGMCPSTSYSDLRKYFSGLYIPHNGIKIMTVHGNR-TGVAYVEFSRVSSAQK 456
Query: 200 ALLRHKEKIGHRLVTLVMSGAQWF 223
AL R+ RLV +V G + F
Sbjct: 457 ALSRNNTMFRDRLVQIVPIGDEEF 480
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQ LP+ D+ F GL I G+ I G G A+I F E+A A+L
Sbjct: 3 VIIRLQNLPWTANARDIRNFFTGLSIPEGGVHI----IGGEMGDAFIAFSTDEDARCAML 58
Query: 203 RHKEKIGHRLVTLVMS 218
+ +EK+ V L++S
Sbjct: 59 KDREKLMEVQVRLLLS 74
>gi|75071008|sp|Q5RFT7.1|RB12B_PONAB RecName: Full=RNA-binding protein 12B; AltName: Full=RNA-binding
motif protein 12B
gi|55725003|emb|CAH89370.1| hypothetical protein [Pongo abelii]
Length = 761
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 97/250 (38%), Gaps = 39/250 (15%)
Query: 44 GEADVEFSSVDDAQRALQRHKSNMGDRYIELY------MEEGTSSKEAN--GRGTGGFGG 95
GEA + F++ +DA+RA+ R + D +EL+ M++ K + GRG G G
Sbjct: 41 GEAFIIFATDEDARRAISRSGGFIKDSSVELFLSSKAEMQKTIEMKRTDRVGRGRPGSG- 99
Query: 96 VKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA--------------VD 141
G+ +S + A S ++ + S +
Sbjct: 100 ------TSGVGSLSNIIESVKEEASNSGYGSSINQDAGFHSNGTGHGNLRPRKTRPLKAE 153
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ L+GLPY ++DV F GL + +G+ + GR G A ++F +A L
Sbjct: 154 NPYLFLRGLPYLVNEDDVRVFFSGLCV--DGVIFLKHHDGRNNGDAIVKFASCVDASGGL 211
Query: 202 LRHKEKIGHRLVTLVMSGA--QWF-LSPPLTNETPISRLDLTGSPVRST----ICVLCHP 254
H+ +G R + VM G+ QW E + R SP R H
Sbjct: 212 KCHRSFMGSRFIE-VMQGSEQQWIEFGGNAVKEGDVLRRSEEHSPPRGINDRHFRKRSHS 270
Query: 255 LTPRSVRPRS 264
+PR R RS
Sbjct: 271 KSPRRTRSRS 280
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
G++ + C+ ++ P++ K +V+KF + + I + +D G G A ++F +E
Sbjct: 394 GNSGQKLCIYIRNFPFDVTKVEVQKFFADFLLAEDDIYLLYDDKGVGLGEALVKFKSEEQ 453
Query: 197 AEKA-LLRHKEKIGHRLVTLVMSGAQ 221
A KA L + +G ++ ++S AQ
Sbjct: 454 AMKAERLNRRRFLGTEVLLRLISEAQ 479
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIEL 74
FF + ++ L GR++G+A V+F+S DA L+ H+S MG R+IE+
Sbjct: 174 FFSGLCVDGVIFLKHHDGRNNGDAIVKFASCVDASGGLKCHRSFMGSRFIEV 225
>gi|444525890|gb|ELV14185.1| RNA-binding protein 12B [Tupaia chinensis]
Length = 1012
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 102/251 (40%), Gaps = 39/251 (15%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME---EGTSSKEANGRGTGGFGGV 96
G GEA + F++ +DA+RA+ R + + +EL++ E + E G G G +
Sbjct: 37 GGEVGEAFIIFATDEDARRAISRSGGLIKNSSVELFLSSKAEMQKTIEMKRSGHIGRGRL 96
Query: 97 KSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA--------------VDQ 142
S GVG +S F+ S ++ + + +
Sbjct: 97 GSGASGVG--SLSNFIEAIKEETSNSGYGPSINQDAGFHTNGTGHGDLRPRKTRPLKAEN 154
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+ L+GLPY ++DV F GL + +G+ + GR G A ++F +A L
Sbjct: 155 PYLFLRGLPYLVNEDDVRVFFSGLCV--DGVIFLKHHDGRNNGDAIVKFASCVDASGGLK 212
Query: 203 RHKEKIGHRLVTLVMSGA--QWFLSPPLTNETPISRLDLTGSPVRS-TICVLCHPLTPRS 259
H+ +G R + VM G+ QW +DL G+ V+ + V +P+
Sbjct: 213 CHRSFMGSRFIE-VMQGSEQQW--------------IDLGGNAVKEGDVPVRSEEQSPKG 257
Query: 260 VRPRSVRQSEH 270
+ R R+ H
Sbjct: 258 INDRHFRKWSH 268
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 79/199 (39%), Gaps = 24/199 (12%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF + ++ L GR++G+A V+F+S DA L+ H+S MG R+IE+ +G+
Sbjct: 174 FFSGLCVDGVIFLKHHDGRNNGDAIVKFASCVDASGGLKCHRSFMGSRFIEVM--QGSEQ 231
Query: 83 K------EANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
+ A G + +P G+ ++ R+ RS
Sbjct: 232 QWIDLGGNAVKEGDVPVRSEEQSPKGINDRHFRKWSHSKSPRSTRSRSPLGF-------- 283
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
+ L+ LP K D+ F ++ I + R T A++ F ++
Sbjct: 284 -------YVHLKNLPLSINKRDLRNFFRDTDLANEQIRFLYK-DERRTRYAFVTFKTLKD 335
Query: 197 AEKALLRHKEKIGHRLVTL 215
AL HK + +R V +
Sbjct: 336 YNTALSLHKTVLQYRPVHV 354
>gi|390332535|ref|XP_001184447.2| PREDICTED: probable RNA-binding protein 19-like [Strongylocentrotus
purpuratus]
Length = 513
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
++++G+P+ K+EDV KF L + I P + G+ TGV +++F +++ KA+ R
Sbjct: 373 TIKMRGVPFNVKEEDVVKFFAPLSM--KTIRAPLNEKGQRTGVIFVEFASEDDITKAMKR 430
Query: 204 HKEKIGHRLVTLVMSGA 220
++E +G R V L A
Sbjct: 431 NREYMGRRYVELFREEA 447
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
+FF P+ I ++ G+ +G VEF+S DD +A++R++ MG RY+EL+ EE
Sbjct: 390 KFFAPLSMKTIRAPLNEKGQRTGVIFVEFASEDDITKAMKRNREYMGRRYVELFREEA 447
>gi|449666027|ref|XP_002162990.2| PREDICTED: probable RNA-binding protein 19-like [Hydra
magnipapillata]
Length = 914
Score = 50.8 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 40/181 (22%), Positives = 78/181 (43%), Gaps = 38/181 (20%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FFKP++ +I + G+SSG A V+F +++D + AL++ K + RYIEL+
Sbjct: 323 EFFKPLIIDDIRFPKNKDGKSSGYAFVDFKTIEDVKSALKKDKQKIQGRYIELFPVNDLE 382
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
+ + N F KW ++ ++ D + D
Sbjct: 383 NLKQN-----------------------DFNKKWTQKGDEADEDIS-------------D 406
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDY-AGRCTGVAYIQFVDKENAEKA 200
+ ++ L Y C ++ + + I +P D + + TG A++ F+ ++A KA
Sbjct: 407 TGRLFVRNLSYTCTEDSLTNLFSQFGPLVE-INLPIDKNSNKTTGFAFVTFMMADHAIKA 465
Query: 201 L 201
+
Sbjct: 466 M 466
Score = 45.4 bits (106), Expect = 0.031, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
++++G+P++C +++V +F + L I + I P + G+ +G A++ F E+ + AL +
Sbjct: 307 VKMRGIPFKCSEKEVIEFFKPLII--DDIRFPKNKDGKSSGYAFVDFKTIEDVKSALKKD 364
Query: 205 KEKIGHRLVTL 215
K+KI R + L
Sbjct: 365 KQKIQGRYIEL 375
>gi|390465839|ref|XP_003733475.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein F-like [Callithrix jacchus]
Length = 573
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Query: 118 RAKRSEMDWALKRQGAVLSGSAVD-QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIP 176
++ R+E+ W L++ S S+ + + QGLP K++ +F LE VP+GIT+
Sbjct: 257 KSHRTEVSWVLRKHPGPNSASSSNYRFVHXHQGLPSGXHKQETIQFFSELETVPDGITLS 316
Query: 177 HDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGAQ 221
D + +E AEK L + KE+ GHR + + SG +
Sbjct: 317 VDPR-ESLQEKLVLLASQELAEKVLXKPKERTGHRNMEVFKSGQE 360
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME--EG 79
F P+ PV + + GR + +ADVEF++ ++A A+ + ++NM RYIEL + G
Sbjct: 471 NLFSPLNPVRVHIEMGPDGRLTCKADVEFATWEEAGAAMSKDRANMQHRYIELSLNLTTG 530
Query: 80 TSSKEANGRGTGGFG 94
S+ + +G G G
Sbjct: 531 ASNGAXSCQGMQGVG 545
>gi|149412787|ref|XP_001509129.1| PREDICTED: RNA-binding protein 12B-like [Ornithorhynchus anatinus]
Length = 692
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 81/207 (39%), Gaps = 26/207 (12%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS-------SKEANGRGTGG 92
G GEA + F++ +DA+RA+ + D IEL++ T S++ RG
Sbjct: 37 GGEIGEAFIIFATDEDARRAMSCSGGFIKDSLIELFLSSKTEMQNTIEMSRKRFDRGGRD 96
Query: 93 FGGVK-------STPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV----- 140
G K + + + + K M +A + G S
Sbjct: 97 LAGCKRPGAGASGAAGLSSLSNLVEAIKKGMSKAGADHPEAGFHTNGTRHGDSGARKEAR 156
Query: 141 ----DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
D + L G+PY + +V F GL + +G+ + + GR G +++F +
Sbjct: 157 TFQSDDRYLFLHGMPYSVTEGEVHAFFSGLRV--DGVILLKHHNGRNNGDGFVKFATSHD 214
Query: 197 AEKALLRHKEKIGHRLVTLV-MSGAQW 222
A L RH+ +G R V + S QW
Sbjct: 215 ALGGLQRHRHYMGPRFVEISPASQQQW 241
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIEL 74
FF + ++LL GR++G+ V+F++ DA LQRH+ MG R++E+
Sbjct: 182 FFSGLRVDGVILLKHHNGRNNGDGFVKFATSHDALGGLQRHRHYMGPRFVEI 233
>gi|417405481|gb|JAA49451.1| Putative conserved secreted protein precursor [Desmodus rotundus]
Length = 976
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 83/197 (42%), Gaps = 22/197 (11%)
Query: 44 GEADVEFSSVDDAQRALQRHKSNMGDRYIELYM-EEGTSSKEANGRGTGGFGGVKSTPYG 102
GEA + F++ +DA+RA+ R + D +EL++ + K + T G +
Sbjct: 41 GEAFIIFATDEDARRAISRSGGFIKDSSVELFLSSKAEMQKTIEMKRTDHKGRERPGSGA 100
Query: 103 VGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMR---------------L 147
G+ C+S F+ A S + Q A + +R L
Sbjct: 101 SGVGCLSNFVEGIKEEASNSGYGSPIN-QDAEFHTNGTGHGDLRPRKTRPLKAENPYLFL 159
Query: 148 QGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEK 207
+GLPY ++DV F GL + +G+ + GR G A ++F +A L H+
Sbjct: 160 RGLPYLVNEDDVRVFFSGLCV--DGVIFLKHHDGRNNGDAIVKFASCVDASGGLKCHRSF 217
Query: 208 IGHRLVTLVMSGA--QW 222
+G R + VM G+ QW
Sbjct: 218 MGSRFIE-VMQGSEQQW 233
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 131 QGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
Q G + + C+ ++ P++ K +V+KF + + I + +D G G A ++
Sbjct: 388 QKYSQEGYSGQKLCIYMRNFPFDVTKVEVQKFFADFSLNEDDIYLLYDDKGVGLGEALVK 447
Query: 191 FVDKENAEKA-LLRHKEKIGHRLVTLVMSGAQ 221
F +E A KA L + +G ++ ++S AQ
Sbjct: 448 FTSEEQAMKAERLNRRRFLGTEVLLRLISEAQ 479
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIEL 74
FF + ++ L GR++G+A V+F+S DA L+ H+S MG R+IE+
Sbjct: 174 FFSGLCVDGVIFLKHHDGRNNGDAIVKFASCVDASGGLKCHRSFMGSRFIEV 225
>gi|24655341|ref|NP_647626.1| CG7879, isoform A [Drosophila melanogaster]
gi|24655346|ref|NP_728631.1| CG7879, isoform B [Drosophila melanogaster]
gi|7292101|gb|AAF47513.1| CG7879, isoform A [Drosophila melanogaster]
gi|7292102|gb|AAF47514.1| CG7879, isoform B [Drosophila melanogaster]
Length = 985
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
D C +R+ G+ D+ K+ +G+ I NGI I G TGVAY++F +A+K
Sbjct: 351 ADTCYIRMSGMCQNTSYSDIRKYFQGMYIPHNGIKI-MMVNGSRTGVAYVEFSRVSSAQK 409
Query: 200 ALLRHKEKIGHRLVTLVMSGAQWF 223
A+ R+ RL+ +V G F
Sbjct: 410 AVQRNNTMFRDRLIQIVPVGDDEF 433
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQ LP+ D+ F GL I G+ I G G A+I F E+A A+L
Sbjct: 3 VIIRLQNLPWTANARDIRNFFSGLSIPEGGVHI----IGGEMGDAFIAFSTDEDARCAML 58
Query: 203 RHKEKIGHRLVTLVMS 218
+ +EK+ V L++S
Sbjct: 59 KDREKLMEIQVRLLLS 74
>gi|119612105|gb|EAW91699.1| RNA binding motif protein 12B [Homo sapiens]
Length = 707
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 98/250 (39%), Gaps = 39/250 (15%)
Query: 44 GEADVEFSSVDDAQRALQRHKSNMGDRYIELY------MEEGTSSKEAN--GRGTGGFGG 95
GEA + F++ +DA+RA+ R + D +EL+ M++ K + GRG G G
Sbjct: 41 GEAFIIFATDEDARRAISRSGGFIKDSSVELFLSSKAEMQKTIEMKRTDRVGRGRPGSG- 99
Query: 96 VKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA--------------VD 141
G+ +S F+ A S ++ + + +
Sbjct: 100 ------TSGVDSLSNFIESVKEEASNSGYGSSINQDAGFHTNGTGHGNLRPRKTRPLKAE 153
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ L+GLPY ++DV F GL + +G+ + GR G A ++F +A L
Sbjct: 154 NPYLFLRGLPYLVNEDDVRVFFSGLCV--DGVIFLKHHDGRNNGDAIVKFASCVDASGGL 211
Query: 202 LRHKEKIGHRLVTLVMSGA--QWF-LSPPLTNETPISRLDLTGSPVRST----ICVLCHP 254
H+ +G R + VM G+ QW E + R SP R H
Sbjct: 212 KCHRSFMGSRFIE-VMQGSEQQWIEFGGNAVKEGDVLRRSEEHSPPRGINDRHFRKRSHS 270
Query: 255 LTPRSVRPRS 264
+PR R RS
Sbjct: 271 KSPRRTRSRS 280
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 131 QGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
Q G++ + C+ ++ P++ K +V+KF + + I + +D G G A ++
Sbjct: 388 QKYSQEGNSGQKLCIYIRNFPFDVTKVEVQKFFADFLLAEDDIYLLYDDKGVGLGEALVK 447
Query: 191 FVDKENAEKA-LLRHKEKIGHRLVTLVMSGAQ 221
F +E A KA L + +G ++ ++S AQ
Sbjct: 448 FKSEEQAMKAERLNRRRFLGTEVLLRLISEAQ 479
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIEL 74
FF + ++ L GR++G+A V+F+S DA L+ H+S MG R+IE+
Sbjct: 174 FFSGLCVDGVIFLKHHDGRNNGDAIVKFASCVDASGGLKCHRSFMGSRFIEV 225
>gi|20152135|gb|AAM11427.1| SD09402p [Drosophila melanogaster]
Length = 984
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
D C +R+ G+ D+ K+ +G+ I NGI I G TGVAY++F +A+K
Sbjct: 351 ADTCYIRMSGMCQNTSYSDIRKYFQGMYIPHNGIKI-MMVNGSRTGVAYVEFSRVSSAQK 409
Query: 200 ALLRHKEKIGHRLVTLVMSGAQWF 223
A+ R+ RL+ +V G F
Sbjct: 410 AVQRNNTMFRDRLIQIVPVGDDEF 433
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQ LP+ D+ F GL I G+ I G G A+I F E+A A+L
Sbjct: 3 VIIRLQNLPWTANARDIRNFFSGLSIPEGGVHI----IGGEMGDAFIAFSTDEDARCAML 58
Query: 203 RHKEKIGHRLVTLVMS 218
+ +EK+ V L++S
Sbjct: 59 KDREKLMEIQVRLLLS 74
>gi|156401535|ref|XP_001639346.1| predicted protein [Nematostella vectensis]
gi|156226474|gb|EDO47283.1| predicted protein [Nematostella vectensis]
Length = 90
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYA---GRCTGVAYIQFVDKENAEKAL 201
+R+ GLP+E K D+ KF GL+I + + H G+ TGVA++ F +A KAL
Sbjct: 18 VRMFGLPFESSKRDLYKFFNGLKIASIDL-LKHKSGKNQGKNTGVAFVVFKSNNDASKAL 76
Query: 202 LRHKEKIGHRLVTL 215
+ IGHR + L
Sbjct: 77 KMDRSYIGHRYIEL 90
>gi|85683183|gb|ABC73567.1| CG7879 [Drosophila miranda]
Length = 309
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 135 LSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDK 194
+S + D C +++ G+ D+ K+ +GL I NGI I G TGVAYI+F
Sbjct: 25 MSSAVADTCYVKISGMCQNTSYSDLRKYFQGLYIPHNGIKI-MTVNGSRTGVAYIEFSRV 83
Query: 195 ENAEKALLRHKEKIGHRLVTLVMSGAQWF 223
+A+KAL R+ R V +V G F
Sbjct: 84 SSAQKALQRNNTMFRDRQVQIVPIGDAEF 112
>gi|428180638|gb|EKX49505.1| hypothetical protein GUITHDRAFT_105029 [Guillardia theta CCMP2712]
Length = 374
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 80/177 (45%), Gaps = 29/177 (16%)
Query: 66 NMGDRYIELYMEEGTSSKEANGRGTGGFGGVKSTPYGV-------------GIFCIS--- 109
N+G+ EL + S +N + TGG + +T GV G +S
Sbjct: 189 NLGENNPELQQ---SLSSGSNNKVTGGKPPIVATSNGVQQSTSESQQEASIGPSAVSGNK 245
Query: 110 --QFLAKWMRRAKRSEM-DWALKRQGAVLS-GSAVD---QCCMRLQGLPYECKKEDVEKF 162
Q L K AKRSE W + + S S VD ++L+GLP+ DV F
Sbjct: 246 SEQSLKKQGETAKRSETRGWETQSKALAASRSSGVDGKYPATVKLRGLPFGATSLDVMGF 305
Query: 163 LEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEK--IGHRLVTLVM 217
L+G V + I ++ GR +G A++ F E A K ++R K++ +G+R V L +
Sbjct: 306 LKGYNAVESSIRFGNNQDGRPSGEAWVSFNRLEEA-KRVVREKDRHHLGNRYVELFL 361
>gi|326437182|gb|EGD82752.1| hypothetical protein PTSG_03403 [Salpingoeca sp. ATCC 50818]
Length = 1027
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
G ++ +LQGLP+ C ++ V +F L +V I D R GVA++ F K +
Sbjct: 390 GDSIIVFTAKLQGLPFRCTEQQVREFFSPLSVV--DIRFLLDRRKRGKGVAFVDFATKRD 447
Query: 197 AEKALLRHKEKIGHRLVTLVMS 218
+ AL +H++ +G R V ++ S
Sbjct: 448 YKAALKKHRQTLGPRFVEVLPS 469
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 74/181 (40%), Gaps = 34/181 (18%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF P+ V+I L D R G A V+F++ D + AL++H+ +G R++E+ + T
Sbjct: 414 EFFSPLSVVDIRFLLDRRKRGKGVAFVDFATKRDYKAALKKHRQTLGPRFVEV-LPSKTR 472
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
A G V P G E D L G +
Sbjct: 473 KLPALKPTEGREAKVYPAPLG--------------------EDDKGLDETGRIF------ 506
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHD-YAGRCTGVAYIQFVDKENAEKA 200
++ L Y C ++D+ E + + + +P D + G+A++ F+ ENA KA
Sbjct: 507 -----VRNLAYVCTEDDIRALFEKFGPL-SEVHMPLDTQTKKPKGIAFVTFLHPENAVKA 560
Query: 201 L 201
Sbjct: 561 F 561
>gi|321446634|gb|EFX60905.1| hypothetical protein DAPPUDRAFT_122743 [Daphnia pulex]
Length = 169
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 136 SGSAVDQCCMRLQGLPYECKKEDVEKFLEGL-EIVPNGITIPHDYAGRCTGVAYIQFVDK 194
+GS + + ++GLP+ D+ +F G E+ P+ I I + GR +G A + F ++
Sbjct: 85 NGSGLPGTLVIMRGLPFTASCSDILQFFSGFSELTPDCIQIHRNNDGRPSGEAVVNFPNR 144
Query: 195 ENAEKALL-RHKEKIGHRLVTLVMS 218
AE+A+ ++++ IG R + L M+
Sbjct: 145 AEAERAIAEKNRQNIGTRYIELFMT 169
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 24 FKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRAL-QRHKSNMGDRYIELYM 76
F + P I + ++ GR SGEA V F + +A+RA+ ++++ N+G RYIEL+M
Sbjct: 115 FSELTPDCIQIHRNNDGRPSGEAVVNFPNRAEAERAIAEKNRQNIGTRYIELFM 168
>gi|432106419|gb|ELK32212.1| RNA-binding protein 12B [Myotis davidii]
Length = 954
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 99/251 (39%), Gaps = 38/251 (15%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM-EEGTSSKEANGRGTGGFGGVKS 98
G GEA + F++ +DA+RA+ R + D +EL++ + K + T G +
Sbjct: 37 GGEMGEAFIIFATDEDARRAVSRSGGFIKDSSVELFLSSKAEMQKILEMKRTDHIGRERP 96
Query: 99 TPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMR------------ 146
+ C+S F+ A S + Q A + +R
Sbjct: 97 GSGASRVGCLSNFVEDVKEEASNSGYGSPMN-QDAGFHANGTGHGDLRPRKTRPLKAVNP 155
Query: 147 ---LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
L+GLPY ++DV F GL V I + HD GR G A ++F +A L
Sbjct: 156 YLFLRGLPYVVNEDDVRVFFSGL-CVDGVIFLKHD-DGRNNGHAMVKFASCIDASGGLKC 213
Query: 204 HKEKIGHRLVTLVMSGA--QWFLSPPLTNETPISRLDLTGSPV-RSTICVLCHPLT-PRS 259
H+ +G R + VM G+ QW +D GS V S I V + PR
Sbjct: 214 HRSYMGSRFIE-VMQGSEQQW--------------IDFGGSSVTESDIPVRTEEHSPPRE 258
Query: 260 VRPRSVRQSEH 270
+ R R+ H
Sbjct: 259 INDRHFRKRSH 269
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIEL 74
FF + ++ L D GR++G A V+F+S DA L+ H+S MG R+IE+
Sbjct: 174 FFSGLCVDGVIFLKHDDGRNNGHAMVKFASCIDASGGLKCHRSYMGSRFIEV 225
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 131 QGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
Q G + + C+ ++ P++ K +V+KF + + I + +D G G A ++
Sbjct: 388 QKYSQEGYSGQKLCIYIRNFPFDVTKAEVQKFFADFSLAEDDIYLLYDDKGVGLGEALVK 447
Query: 191 FVDKENAEKA-LLRHKEKIGHRLVTLVMSGAQ 221
F +E A KA L + +G ++ ++S AQ
Sbjct: 448 FKSEEQAMKAERLNRRRFLGTEVLLRLISEAQ 479
>gi|431917851|gb|ELK17082.1| RNA-binding protein 12B [Pteropus alecto]
Length = 965
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 21/200 (10%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM-EEGTSSKEANGRGTGGFGGVKS 98
G GEA + F++ +DA+RA+ R + D +EL++ + K + T G +
Sbjct: 78 GGDVGEAFIIFATDEDARRAISRSGGFIKDSSVELFLSSKAEMQKTIEMKRTDRIGRERP 137
Query: 99 TPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA--------------VDQCC 144
G+ C+S F+ + ++ A S + + + +
Sbjct: 138 GSGASGVGCLSNFV-EGIKAASNSGYGSPINQDSGFHTNGTGHGDLRPRKTRPLKAENPY 196
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+ L+GLPY + DV F GL + +G+ + GR G A ++F +A L H
Sbjct: 197 LFLRGLPYLVNENDVRVFFSGLCV--DGVIFLKHHDGRNNGDAIVKFASCIDASGGLKCH 254
Query: 205 KEKIGHRLVTLVMSGA--QW 222
+ +G R + VM G+ QW
Sbjct: 255 RSFMGSRFIE-VMQGSEQQW 273
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 136 SGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
G + + C+ ++ P++ K +V+KF + + I + +D G G A ++F +E
Sbjct: 432 QGYSGQKLCIYIRNFPFDVTKVEVQKFFADFSLEEDDIYLLYDDKGVGLGEALVKFKSEE 491
Query: 196 NAEKA-LLRHKEKIGHRLVTLVMSGAQ 221
A KA L + +G ++ ++S AQ
Sbjct: 492 QAMKAERLNRRRFLGTEVLLRLISEAQ 518
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIEL 74
FF + ++ L GR++G+A V+F+S DA L+ H+S MG R+IE+
Sbjct: 214 FFSGLCVDGVIFLKHHDGRNNGDAIVKFASCIDASGGLKCHRSFMGSRFIEV 265
>gi|332022470|gb|EGI62777.1| RNA-binding protein 12 [Acromyrmex echinatior]
Length = 883
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++ +P D+ G+ I +G+ I +D G G+AYI+F E E AL
Sbjct: 451 CVEVRNMPLSATYADLRHAFHGIYIRKDGMKIINDNHGNRVGIAYIKFGKAEGKELALST 510
Query: 204 HKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVRSTICVLCHPLTPRSVRPR 263
+ G + L + + + + +P +R D T VR+++C+L L P +
Sbjct: 511 TRYVRGSEVEVLDLD--ESIFDKAVNSYSPENREDGTDGDVRNSMCILLTDL-PSFTKEM 567
Query: 264 SVRQSEHEW 272
+ + H+W
Sbjct: 568 DIAKLFHDW 576
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 11/119 (9%)
Query: 98 STPYGVGIFCISQFLAKWMRRAKRSEMDWA-LKRQGAVLSGSAVDQCCMRLQGLPYECKK 156
STP +G +K + SE +A KR+ S + D C+ ++GLP++
Sbjct: 611 STPLKIG--------SKQVTATAISEEKFAQAKREHEQASMNQTD--CVLMRGLPFQTID 660
Query: 157 EDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTL 215
D+ F + IVP I + + G+ G + +F E AE+A+ ++ +G + T+
Sbjct: 661 RDIFDFFSDIGIVPLCIHMMLNQQGKPAGECFCEFDSAEKAERAITKNGLPLGKNIPTI 719
>gi|395818217|ref|XP_003782532.1| PREDICTED: RNA-binding protein 12B isoform 3 [Otolemur garnettii]
Length = 996
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 105/261 (40%), Gaps = 37/261 (14%)
Query: 44 GEADVEFSSVDDAQRALQRHKSNMGDRYIELY------MEEGTSSKEAN--GRGTGGFGG 95
GEA + F++ +DA+RA+ R + D +EL+ M++ K + GRG G G
Sbjct: 51 GEAFIIFATDEDARRAISRSGGFIKDSSVELFLSSKAEMQKTIDVKRTDRVGRGRPGSGA 110
Query: 96 VKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA--------------VD 141
GVG S F+ A S ++ + + +
Sbjct: 111 S-----GVG--SRSDFIEPVKEEASNSGYGSSINQDAGFHTNGTGHGELRPRKTRPLKAE 163
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ L+GLPY ++DV F GL + +G+ + GR G A ++F +A L
Sbjct: 164 NPYLFLRGLPYLVNEDDVRVFFSGLCV--DGVIFLKHHDGRNNGDAIVKFASCIDASGGL 221
Query: 202 LRHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVRSTICVLCHPLTPRSVR 261
H+ +G R + ++ Q ++ + LD+ PVRS + R R
Sbjct: 222 KCHRSFMGSRFIEVMQGSEQQWIE---FGGNAVKELDV---PVRSEEHSPPRGINDRHFR 275
Query: 262 PRSVRQSEHEWWALARLGSFL 282
RS +S + + LG ++
Sbjct: 276 KRSHSKSPRRTRSRSPLGFYV 296
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 136 SGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
G + + C+ ++ P++ K +V+KF + + I + +D G G A ++F +E
Sbjct: 403 EGHSSQKLCIYIRNFPFDVTKVEVQKFFADFSLAEDDIYLLYDDKGVGLGEALVKFKSEE 462
Query: 196 NAEKA-LLRHKEKIGHRLVTLVMSGAQ 221
A KA L + +G ++ ++S AQ
Sbjct: 463 QAMKAERLNRRRFLGTEVLLRLISEAQ 489
>gi|407393563|gb|EKF26660.1| heterogeneous nuclear ribonucleoprotein H/F, putative [Trypanosoma
cruzi marinkellei]
Length = 454
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+R++G+PY +E + +F G++I P G+ + ++ R TG A+++ + + AL R
Sbjct: 346 VVRIRGVPYAATEESIAEFFAGVKIPPQGVHMVYNEQNRPTGEAFVELENDSDLVAALER 405
Query: 204 HKEKIGHRLVTLVMS--GAQWFLSPPLTNETPISRLDLTG 241
+ +G+R + + S A L PLT + + + G
Sbjct: 406 NGGAMGNRYIEVFQSSVAAMQRLGSPLTGMMNMMQYSMPG 445
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP+ +ED+ +F+ + V + I D GR TG A+IQ +E+ E+A
Sbjct: 154 VLRLRGLPFTSTEEDLREFVRCVPGV-TRVDICRDLEGRNTGDAFIQLATEEDVEEAKQL 212
Query: 204 HKEKIGHRLVTLVMS 218
H + +G R + ++ S
Sbjct: 213 HNKTMGSRYIEVLPS 227
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FF I P + ++ ++ R +GEA VE + D AL+R+ MG+RYIE++
Sbjct: 362 AEFFAGVKIPPQGVHMVYNEQNRPTGEAFVELENDSDLVAALERNGGAMGNRYIEVFQSS 421
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGI 105
+ + TG ++ + G+G+
Sbjct: 422 VAAMQRLGSPLTGMMNMMQYSMPGLGV 448
>gi|71649626|ref|XP_813529.1| heterogeneous nuclear ribonucleoprotein H/F [Trypanosoma cruzi
strain CL Brener]
gi|70878421|gb|EAN91678.1| heterogeneous nuclear ribonucleoprotein H/F, putative [Trypanosoma
cruzi]
Length = 450
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+R++G+PY +E + +F G++I P G+ + ++ R TG A+++ + + AL R
Sbjct: 342 VVRIRGVPYAATEESIAEFFAGVKIPPQGVHMVYNEQNRPTGEAFVELENDSDLVAALER 401
Query: 204 HKEKIGHRLVTLVMS--GAQWFLSPPLTNETPISRLDLTG 241
+ +G+R + + S A L PLT + + + G
Sbjct: 402 NGGAMGNRYIEVFQSSVAAMQRLGSPLTGMMNMMQYSMPG 441
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP+ +ED+ +F+ + V + I D GR TG A+IQ +E+ E+A
Sbjct: 150 VLRLRGLPFTSTEEDLREFVRSVPGV-TRVDICRDMEGRNTGDAFIQLATEEDVEEAKQL 208
Query: 204 HKEKIGHRLVTLVMS 218
H + +G R + ++ S
Sbjct: 209 HNKTMGSRYIEVLPS 223
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FF I P + ++ ++ R +GEA VE + D AL+R+ MG+RYIE++
Sbjct: 358 AEFFAGVKIPPQGVHMVYNEQNRPTGEAFVELENDSDLVAALERNGGAMGNRYIEVFQSS 417
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGI 105
+ + TG ++ + G+G+
Sbjct: 418 VAAMQRLGSPLTGMMNMMQYSMPGLGV 444
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 37 DDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIEL 74
D GR++G+A ++ ++ +D + A Q H MG RYIE+
Sbjct: 183 DMEGRNTGDAFIQLATEEDVEEAKQLHNKTMGSRYIEV 220
>gi|407866924|gb|EKG08457.1| heterogeneous nuclear ribonucleoprotein H/F, putative [Trypanosoma
cruzi]
Length = 450
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+R++G+PY +E + +F G++I P G+ + ++ R TG A+++ + + AL R
Sbjct: 342 VVRIRGVPYAATEESIAEFFAGVKIPPQGVHMVYNEQNRPTGEAFVELENDSDLVAALER 401
Query: 204 HKEKIGHRLVTLVMS--GAQWFLSPPLT 229
+ +G+R + + S A L PLT
Sbjct: 402 NGGAMGNRYIEVFQSSVAAMQRLGSPLT 429
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP+ +ED+ +F+ + V + I D GR TG A+IQ +E+ E+A
Sbjct: 150 VLRLRGLPFTSTEEDLREFVRSVPGV-TRVDICRDMEGRNTGDAFIQLATEEDVEEAKQL 208
Query: 204 HKEKIGHRLVTLVMS 218
H + +G R + ++ S
Sbjct: 209 HNKTMGSRYIEVLPS 223
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FF I P + ++ ++ R +GEA VE + D AL+R+ MG+RYIE++
Sbjct: 358 AEFFAGVKIPPQGVHMVYNEQNRPTGEAFVELENDSDLVAALERNGGAMGNRYIEVFQSS 417
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGI 105
+ + TG ++ + G+G+
Sbjct: 418 VAAMQRLGSPLTGMMNMMQYSMPGLGV 444
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 37 DDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIEL 74
D GR++G+A ++ ++ +D + A Q H MG RYIE+
Sbjct: 183 DMEGRNTGDAFIQLATEEDVEEAKQLHNKTMGSRYIEV 220
>gi|395513917|ref|XP_003761168.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-binding protein 19
[Sarcophilus harrisii]
Length = 954
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
+F P+ PV I ++ + G +G V+FSS D ++AL+ +K MG RYIE++ E+G
Sbjct: 303 EFLVPLKPVAIRIVRNAHGNKTGYVFVDFSSEGDVEKALKHNKEYMGGRYIEVFREKG 360
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
++L+G P+ +++V +FL + + P I I + G TG ++ F + + EKAL
Sbjct: 286 TVKLRGAPFNVTEQNVREFL--VPLKPVAIRIVRNAHGNKTGYVFVDFSSEGDVEKALKH 343
Query: 204 HKEKIGHRLVTL 215
+KE +G R + +
Sbjct: 344 NKEYMGGRYIEV 355
>gi|71425877|ref|XP_813187.1| heterogeneous nuclear ribonucleoprotein H/F [Trypanosoma cruzi
strain CL Brener]
gi|70878047|gb|EAN91336.1| heterogeneous nuclear ribonucleoprotein H/F, putative [Trypanosoma
cruzi]
Length = 448
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+R++G+PY +E + +F G++I P G+ + ++ R TG A+++ + + AL R
Sbjct: 340 VVRIRGVPYAATEESIAEFFAGVKIPPQGVHMVYNEQNRPTGEAFVELENDSDLVAALER 399
Query: 204 HKEKIGHRLVTLVMS--GAQWFLSPPLTNETPISRLDLTG 241
+ +G+R + + S A L PLT + + + G
Sbjct: 400 NGGAMGNRYIEVFQSSVAAMQRLGSPLTGMMNMMQYSMPG 439
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP+ +ED+ +F+ + V + I D GR TG A+IQ +E+ E+A
Sbjct: 148 VLRLRGLPFTSTEEDLREFVSSVPGV-TRVDICRDMEGRNTGDAFIQLATEEDVEEAKQL 206
Query: 204 HKEKIGHRLVTLVMS 218
H + +G R + ++ S
Sbjct: 207 HNKTMGSRYIEVLPS 221
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FF I P + ++ ++ R +GEA VE + D AL+R+ MG+RYIE++
Sbjct: 356 AEFFAGVKIPPQGVHMVYNEQNRPTGEAFVELENDSDLVAALERNGGAMGNRYIEVFQSS 415
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGI 105
+ + TG ++ + G+G+
Sbjct: 416 VAAMQRLGSPLTGMMNMMQYSMPGLGV 442
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 37 DDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIEL 74
D GR++G+A ++ ++ +D + A Q H MG RYIE+
Sbjct: 181 DMEGRNTGDAFIQLATEEDVEEAKQLHNKTMGSRYIEV 218
>gi|226487872|emb|CAX75601.1| Heterogeneous nuclear ribonucleoprotein H' [Schistosoma japonicum]
Length = 153
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+R++GLP+ +D+ F + I GI P GR G A+I+ K++ EKA+
Sbjct: 5 VRIRGLPFSANADDIINFFKDCTIRGGKRGIYFPQGPNGRSNGEAFIELDSKDDKEKAMA 64
Query: 203 RHKEKIGHRLVTLVMS---------GAQWFLSP 226
H E +G R + + S G++ F SP
Sbjct: 65 HHNEHMGRRYIEVFDSCSEELNNAMGSRPFSSP 97
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
GRS+GEA +E S DD ++A+ H +MG RYIE++
Sbjct: 43 GRSNGEAFIELDSKDDKEKAMAHHNEHMGRRYIEVF 78
>gi|194747277|ref|XP_001956079.1| GF25026 [Drosophila ananassae]
gi|190623361|gb|EDV38885.1| GF25026 [Drosophila ananassae]
Length = 1037
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
D C +R+ L D+ K+ +GL I NGI I G TGVAY++F +A+K
Sbjct: 376 ADTCYIRMNSLCPSTSYSDIRKYFQGLYIPHNGIKI-MQVNGNRTGVAYVEFSRVSSAQK 434
Query: 200 ALLRHKEKIGHRLVTLVMSGAQWF 223
AL R+ R + + G + F
Sbjct: 435 ALQRNNTMFRDRQIQITPVGDEEF 458
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQ LP+ D+ F GL I G+ I G G A+I F E+A A+L
Sbjct: 3 VIIRLQNLPWTANARDIRNFFSGLAIPEGGVHI----IGGEMGDAFIAFSTDEDARCAML 58
Query: 203 RHKEKIGHRLVTLVMS 218
+ +EK+ V L++S
Sbjct: 59 KDREKLMEIQVRLLLS 74
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
Query: 28 VPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIEL---------YMEE 78
+P N + + G +G A VEFS V AQ+ALQR+ + DR I++ EE
Sbjct: 404 IPHNGIKIMQVNGNRTGVAYVEFSRVSSAQKALQRNNTMFRDRQIQITPVGDEEFEQAEE 463
Query: 79 GTSSKEANGRGTGGFGGV 96
T + E R GG
Sbjct: 464 RTQNSEGGKRNQNSGGGA 481
>gi|395818213|ref|XP_003782530.1| PREDICTED: RNA-binding protein 12B isoform 1 [Otolemur garnettii]
gi|395818215|ref|XP_003782531.1| PREDICTED: RNA-binding protein 12B isoform 2 [Otolemur garnettii]
Length = 986
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 105/261 (40%), Gaps = 37/261 (14%)
Query: 44 GEADVEFSSVDDAQRALQRHKSNMGDRYIELY------MEEGTSSKEAN--GRGTGGFGG 95
GEA + F++ +DA+RA+ R + D +EL+ M++ K + GRG G G
Sbjct: 41 GEAFIIFATDEDARRAISRSGGFIKDSSVELFLSSKAEMQKTIDVKRTDRVGRGRPGSGA 100
Query: 96 VKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA--------------VD 141
GVG S F+ A S ++ + + +
Sbjct: 101 S-----GVG--SRSDFIEPVKEEASNSGYGSSINQDAGFHTNGTGHGELRPRKTRPLKAE 153
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ L+GLPY ++DV F GL + +G+ + GR G A ++F +A L
Sbjct: 154 NPYLFLRGLPYLVNEDDVRVFFSGLCV--DGVIFLKHHDGRNNGDAIVKFASCIDASGGL 211
Query: 202 LRHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVRSTICVLCHPLTPRSVR 261
H+ +G R + ++ Q ++ + LD+ PVRS + R R
Sbjct: 212 KCHRSFMGSRFIEVMQGSEQQWIE---FGGNAVKELDV---PVRSEEHSPPRGINDRHFR 265
Query: 262 PRSVRQSEHEWWALARLGSFL 282
RS +S + + LG ++
Sbjct: 266 KRSHSKSPRRTRSRSPLGFYV 286
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 136 SGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
G + + C+ ++ P++ K +V+KF + + I + +D G G A ++F +E
Sbjct: 393 EGHSSQKLCIYIRNFPFDVTKVEVQKFFADFSLAEDDIYLLYDDKGVGLGEALVKFKSEE 452
Query: 196 NAEKA-LLRHKEKIGHRLVTLVMSGAQ 221
A KA L + +G ++ ++S AQ
Sbjct: 453 QAMKAERLNRRRFLGTEVLLRLISEAQ 479
>gi|222615465|gb|EEE51597.1| hypothetical protein OsJ_32850 [Oryza sativa Japonica Group]
Length = 340
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Query: 132 GAVLSGSAVDQCC-----MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGV 186
GA L G+ + +RL+GLP++C D+ KF GL+IV + H GR TG
Sbjct: 206 GANLPGAGANSAIQNFPGVRLRGLPFDCDDLDIFKFFVGLDIV--DCLLVHK-NGRFTGE 262
Query: 187 AYIQFVDKENAEKALLRHKEKIGHR 211
A++ F AE AL R+++ +G R
Sbjct: 263 AFVVFPSAMQAEFALHRNRQNMGRR 287
>gi|379642961|ref|NP_001243849.1| RNA-binding protein 12B [Equus caballus]
Length = 976
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 82/197 (41%), Gaps = 22/197 (11%)
Query: 44 GEADVEFSSVDDAQRALQRHKSNMGDRYIELYM-EEGTSSKEANGRGTGGFGGVKSTPYG 102
GEA + F++ +DA+RA+ R + D +EL++ + K + T G +
Sbjct: 41 GEAFIIFATDEDARRAISRSGGFIKDSSVELFLSSKAEMQKTIEMKRTDRIGRERPGSGA 100
Query: 103 VGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMR---------------L 147
G+ S F+ A S + QGA + +R L
Sbjct: 101 SGVGSFSDFVEAIKEEASNSGYGSPIN-QGAGFHTNGTGHGDLRPRKTRPLKAENPYLFL 159
Query: 148 QGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEK 207
+GLPY ++DV F GL + +G+ + GR G A ++F +A L H+
Sbjct: 160 RGLPYLVNEDDVRVFFSGLCV--DGVIFLKHHDGRNNGDAIVKFASCIDASGGLKCHRSF 217
Query: 208 IGHRLVTLVMSGA--QW 222
+G R + VM G+ QW
Sbjct: 218 MGSRFIE-VMQGSEQQW 233
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
G + + C+ ++ P++ K +V+KF + + I + +D G G A ++F +E
Sbjct: 394 GYSGQKLCIYIRNFPFDVTKVEVQKFFADFSLAEDDIYLLYDDKGVGLGEALVKFKSEEQ 453
Query: 197 AEKA-LLRHKEKIGHRLVTLVMSGAQ 221
A KA L + +G ++ ++S AQ
Sbjct: 454 AMKAERLNRRRFLGTEVLLRLISEAQ 479
>gi|351713473|gb|EHB16392.1| RNA-binding protein 12B [Heterocephalus glaber]
Length = 959
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 34/203 (16%)
Query: 44 GEADVEFSSVDDAQRALQRHKSNMGDRYIELY------MEEGTSSKEAN--GRGTGGFGG 95
GEA + F++ +DA+RA+ R + D +EL+ M++ K + GRG G G
Sbjct: 41 GEAFIIFATDEDARRAISRSGGFIKDSSVELFLSSKAEMQKTIEMKRIDRIGRGRPGSGA 100
Query: 96 VKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQ-GAVLSGSAVDQCCMR-------- 146
GVG +S ++ S ++ + G +G+ +D R
Sbjct: 101 S-----GVG--SLSNYIEAMKEDENNSGYGSSVNQDAGFHTNGTGLDDLRPRKTRPSKAE 153
Query: 147 -----LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
L+GLPY ++DV F GL + +G+ + GR G A ++F +A L
Sbjct: 154 NPYLFLRGLPYLVNEDDVRVFFSGLCV--DGVIFLKHHDGRNNGDAIVKFASCIDASGGL 211
Query: 202 LRHKEKIGHRLVTLVMSGA--QW 222
H+ +G R + VM G+ QW
Sbjct: 212 KCHRSFMGSRFIE-VMQGSEQQW 233
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 131 QGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
Q G + + C+ ++ P++ K +V+KF + + I + +D G G A ++
Sbjct: 389 QKYSQEGYSGQKLCIYIRNFPFDVTKVEVQKFFADFSLAEDDIYLLYDDKGVGLGEALVK 448
Query: 191 FVDKENAEKA-LLRHKEKIGHRLVTLVMSGAQ 221
F +E A KA L + +G ++ ++S AQ
Sbjct: 449 FKSEEQAMKAERLNRRRFLGTEVLLRLISEAQ 480
>gi|18027358|gb|AAL55761.1|AF289577_1 unknown [Homo sapiens]
gi|119603621|gb|EAW83215.1| RNA binding motif protein 35B, isoform CRA_b [Homo sapiens]
Length = 303
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 144 CMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ E A A
Sbjct: 52 CVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAA 111
Query: 202 LR-HKEKIGHRLVTLV 216
R HK+ + R V +V
Sbjct: 112 QRCHKKVMKERYVEVV 127
>gi|403295801|ref|XP_003938814.1| PREDICTED: RNA-binding protein 12B [Saimiri boliviensis
boliviensis]
Length = 1001
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 83/196 (42%), Gaps = 20/196 (10%)
Query: 44 GEADVEFSSVDDAQRALQRHKSNMGDRYIELYM-EEGTSSKEANGRGTGGFGGVKSTPYG 102
GEA + F++ +DA+RA+ R + D +EL++ + K + + T G +
Sbjct: 41 GEAFIIFATDEDARRAISRSGGFIKDSSVELFLSSKAEMQKTIDMKRTDRVGRGRPRSGA 100
Query: 103 VGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA--------------VDQCCMRLQ 148
G+ +S F+ A S ++ + + + + L+
Sbjct: 101 SGVGSLSNFIESVKEEASNSGYGSSINQDAGFHTNGTGHGNLRPRKTRPLKAENPYLFLR 160
Query: 149 GLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKI 208
GLPY ++DV F GL + +G+ + GR G A ++F +A L H+ +
Sbjct: 161 GLPYLVNEDDVRVFFSGLCV--DGVIFLKHHDGRNNGDAIVKFASCVDASGGLKCHRSFM 218
Query: 209 GHRLVTLVMSGA--QW 222
G R + VM G+ QW
Sbjct: 219 GSRFIE-VMQGSEQQW 233
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 131 QGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
Q G++ + C+ ++ P++ K +V+KF + + I + +D G G A ++
Sbjct: 388 QKYSQEGNSGQKLCIYIRNFPFDVTKVEVQKFFADFLLAEDDIYLLYDDKGVGLGEALVK 447
Query: 191 FVDKENAEKA-LLRHKEKIGHRLVTLVMSGAQ 221
F +E A KA L + +G ++ ++S AQ
Sbjct: 448 FKSEEQAMKAERLNRRRFLGTEVLLRLISEAQ 479
>gi|397500945|ref|XP_003821163.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 12B [Pan
paniscus]
Length = 1001
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 34/203 (16%)
Query: 44 GEADVEFSSVDDAQRALQRHKSNMGDRYIELY------MEEGTSSKEAN--GRGTGGFGG 95
GEA + F++ +DA+RA+ R + D +EL+ M++ K + GRG G G
Sbjct: 41 GEAFIIFATDEDARRAISRSGGFIKDSSVELFLSSKAEMQKTIEMKRTDRVGRGRPGSG- 99
Query: 96 VKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA--------------VD 141
G+ +S F+ A S ++ + + +
Sbjct: 100 ------TSGVDSLSNFIESVKEEASNSGYGSSINQDAGFHTNGTGHGNLRPRKTRPLKAE 153
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ L+GLPY ++DV F GL + +G+ + GR G A ++F +A L
Sbjct: 154 NPYLFLRGLPYLVNEDDVRVFFSGLCV--DGVIFLKHHDGRNNGDAIVKFASCVDASGGL 211
Query: 202 LRHKEKIGHRLVTLVMSGA--QW 222
H+ +G R + VM G+ QW
Sbjct: 212 KCHRSFMGSRFIE-VMQGSEQQW 233
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 131 QGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
Q G++ + C+ ++ P++ K +V+KF + + I + +D G G A ++
Sbjct: 388 QKYSQEGNSGQKLCIYIRNFPFDVTKVEVQKFFADFLLAEDDIYLLYDDKGVGLGEALVK 447
Query: 191 FVDKENAEKA-LLRHKEKIGHRLVTLVMSGAQ 221
F +E A KA L + +G ++ ++S AQ
Sbjct: 448 FKSEEQAMKAERLNRRRFLGTEVLLRLISEAQ 479
>gi|296226920|ref|XP_002759119.1| PREDICTED: RNA-binding protein 12B isoform 1 [Callithrix jacchus]
gi|296226922|ref|XP_002759120.1| PREDICTED: RNA-binding protein 12B isoform 2 [Callithrix jacchus]
gi|390475792|ref|XP_003735019.1| PREDICTED: RNA-binding protein 12B [Callithrix jacchus]
gi|390475794|ref|XP_003735020.1| PREDICTED: RNA-binding protein 12B [Callithrix jacchus]
gi|390475796|ref|XP_003735021.1| PREDICTED: RNA-binding protein 12B [Callithrix jacchus]
Length = 1001
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 83/196 (42%), Gaps = 20/196 (10%)
Query: 44 GEADVEFSSVDDAQRALQRHKSNMGDRYIELYM-EEGTSSKEANGRGTGGFGGVKSTPYG 102
GEA + F++ +DA+RA+ R + D +EL++ + K + + T G +
Sbjct: 41 GEAFIIFATDEDARRAISRSGGFIKDSSVELFLSSKAEMQKTIDMKRTDRVGRGRPRSGA 100
Query: 103 VGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA--------------VDQCCMRLQ 148
G+ +S F+ A S ++ + + + + L+
Sbjct: 101 SGVGSLSHFIESVKEEASNSGYGSSINQDAGFHTNGTGHGNLRPRKTRPLKAENPYLFLR 160
Query: 149 GLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKI 208
GLPY ++DV F GL + +G+ + GR G A ++F +A L H+ +
Sbjct: 161 GLPYLVNEDDVRVFFSGLCV--DGVIFLKHHDGRNNGDAIVKFASCVDASGGLKCHRSFM 218
Query: 209 GHRLVTLVMSGA--QW 222
G R + VM G+ QW
Sbjct: 219 GSRFIE-VMQGSEQQW 233
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 131 QGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
Q G++ + C+ ++ P++ K +V+KF + + I + +D G G A ++
Sbjct: 388 QKYSQEGNSGQKLCIYIRNFPFDVTKVEVQKFFADFLLAEDDICLLYDDKGVGLGEALVK 447
Query: 191 FVDKENAEKA-LLRHKEKIGHRLVTLVMSGAQ 221
F +E A KA L + +G ++ ++S AQ
Sbjct: 448 FKSEEQAMKAERLNRRRFLGTEVLLRLISDAQ 479
>gi|332830801|ref|XP_003311886.1| PREDICTED: RNA-binding protein 12B isoform 1 [Pan troglodytes]
gi|332830803|ref|XP_003339206.1| PREDICTED: RNA-binding protein 12B [Pan troglodytes]
gi|332830805|ref|XP_003311887.1| PREDICTED: RNA-binding protein 12B isoform 2 [Pan troglodytes]
gi|332830807|ref|XP_003311889.1| PREDICTED: RNA-binding protein 12B isoform 4 [Pan troglodytes]
gi|332830809|ref|XP_003311890.1| PREDICTED: RNA-binding protein 12B isoform 5 [Pan troglodytes]
gi|410041995|ref|XP_003951348.1| PREDICTED: RNA-binding protein 12B [Pan troglodytes]
gi|410222496|gb|JAA08467.1| RNA binding motif protein 12B [Pan troglodytes]
gi|410266932|gb|JAA21432.1| RNA binding motif protein 12B [Pan troglodytes]
gi|410301828|gb|JAA29514.1| RNA binding motif protein 12B [Pan troglodytes]
gi|410338931|gb|JAA38412.1| RNA binding motif protein 12B [Pan troglodytes]
Length = 1001
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 34/203 (16%)
Query: 44 GEADVEFSSVDDAQRALQRHKSNMGDRYIELY------MEEGTSSKEAN--GRGTGGFGG 95
GEA + F++ +DA+RA+ R + D +EL+ M++ K + GRG G G
Sbjct: 41 GEAFIIFATDEDARRAISRSGGFIKDSSVELFLSSKAEMQKTIEMKRTDRVGRGRPGSG- 99
Query: 96 VKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA--------------VD 141
G+ +S F+ A S ++ + + +
Sbjct: 100 ------TSGVDSLSNFIESVKEEASNSGYGSSINQDAGFHTNGTGHGNLRPRKTRPLKAE 153
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ L+GLPY ++DV F GL + +G+ + GR G A ++F +A L
Sbjct: 154 NPYLFLRGLPYLVNEDDVRVFFSGLCV--DGVIFLKHHDGRNNGDAIVKFASCVDASGGL 211
Query: 202 LRHKEKIGHRLVTLVMSGA--QW 222
H+ +G R + VM G+ QW
Sbjct: 212 KCHRSFMGSRFIE-VMQGSEQQW 233
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 131 QGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
Q G++ + C+ ++ P++ K +V+KF + + I + +D G G A ++
Sbjct: 388 QKYSQEGNSGQKLCIYIRNFPFDVTKVEVQKFFADFLLAEDDIYLLYDDKGVGLGEALVK 447
Query: 191 FVDKENAEKA-LLRHKEKIGHRLVTLVMSGAQ 221
F +E A KA L + +G ++ ++S AQ
Sbjct: 448 FKSEEQAMKAERLNRRRFLGTEVLLRLISEAQ 479
>gi|125541750|gb|EAY88145.1| hypothetical protein OsI_09580 [Oryza sativa Indica Group]
Length = 226
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC-TGVAYIQFVDKENAEKALLR 203
+RL GLP++C D+ KF GL+IV + D+ C T A++ F AE AL R
Sbjct: 24 VRLLGLPFDCSDLDICKFFVGLDIVDCLL----DHKNGCFTDEAFVVFPSAMQAEFALHR 79
Query: 204 HKEKIGHRLVTLVMSGAQ-WFLSPPLTNETPISRLDLTGSPVRST 247
+++ +G R V + Q ++ S TP L L G P +T
Sbjct: 80 NRQNMGRRYVEVFRCKKQEYYSSIAAEKRTPPDVLKLRGLPYFTT 124
>gi|380786971|gb|AFE65361.1| RNA-binding protein 12B [Macaca mulatta]
Length = 1001
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 34/203 (16%)
Query: 44 GEADVEFSSVDDAQRALQRHKSNMGDRYIELY------MEEGTSSKEAN--GRGTGGFGG 95
GEA + F++ +DA+RA+ R + D +EL+ M++ K + GRG G G
Sbjct: 41 GEAFIIFATDEDARRAISRSGGFIKDSSVELFLSSKAEMQKTIEMKRTDRVGRGRPGSGT 100
Query: 96 VKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA--------------VD 141
GVG +S F+ A S ++ + + +
Sbjct: 101 S-----GVG--SLSNFIESVKEEASNSGYGSSINQDAGFHTNGTGHGNLRPRKTRPLKAE 153
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ L+GLPY ++DV F GL + +G+ + GR G A ++F +A L
Sbjct: 154 NPFLFLRGLPYLVNEDDVRVFFSGLCV--DGVIFLKHHDGRNNGDAIVKFASCVDASGGL 211
Query: 202 LRHKEKIGHRLVTLVMSGA--QW 222
H+ +G R + VM G+ QW
Sbjct: 212 KCHRSFMGSRFIE-VMQGSEQQW 233
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 131 QGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
Q G++ + C+ ++ P++ K +V+KF + + I + +D G G A ++
Sbjct: 388 QKYSQEGNSGQKLCIYIRNFPFDVTKVEVQKFFADFLLAEDDIYLLYDDKGVGLGEALVK 447
Query: 191 FVDKENAEKA-LLRHKEKIGHRLVTLVMSGAQ 221
F +E A KA L + +G ++ ++S AQ
Sbjct: 448 FKSEEQAMKAERLNRRRFLGTEVLLRLISEAQ 479
>gi|297299765|ref|XP_002808531.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 12B-like
[Macaca mulatta]
Length = 1001
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 34/203 (16%)
Query: 44 GEADVEFSSVDDAQRALQRHKSNMGDRYIELY------MEEGTSSKEAN--GRGTGGFGG 95
GEA + F++ +DA+RA+ R + D +EL+ M++ K + GRG G G
Sbjct: 41 GEAFIIFATDEDARRAISRSGGFIKDSSVELFLSSKAEMQKTIEMKRTDRVGRGRPGSGT 100
Query: 96 VKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA--------------VD 141
GVG +S F+ A S ++ + + +
Sbjct: 101 S-----GVG--SLSNFIESVKEEASNSGYGSSINQDAGFHTNGTGHGNLRPRKTRPLKAE 153
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ L+GLPY ++DV F GL + +G+ + GR G A ++F +A L
Sbjct: 154 NPFLFLRGLPYLVNEDDVRVFFSGLCV--DGVIFLKHHDGRNNGDAIVKFASCVDASGGL 211
Query: 202 LRHKEKIGHRLVTLVMSGA--QW 222
H+ +G R + VM G+ QW
Sbjct: 212 KCHRSFMGSRFIE-VMQGSEQQW 233
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 131 QGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
Q G++ + C+ ++ P++ K +V+KF + + I + +D G G A ++
Sbjct: 388 QKYSQEGNSGQKLCIYIRNFPFDVTKVEVQKFFADFLLAEDDIYLLYDDKGVGLGEALVK 447
Query: 191 FVDKENAEKA-LLRHKEKIGHRLVTLVMSGAQ 221
F +E A KA L + +G ++ ++S AQ
Sbjct: 448 FKSEEQAMKAERLNRRRFLGTEVLLRLISEAQ 479
>gi|118722349|ref|NP_976324.2| RNA-binding protein 12B [Homo sapiens]
gi|215273872|sp|Q8IXT5.2|RB12B_HUMAN RecName: Full=RNA-binding protein 12B; AltName: Full=RNA-binding
motif protein 12B
Length = 1001
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 34/203 (16%)
Query: 44 GEADVEFSSVDDAQRALQRHKSNMGDRYIELY------MEEGTSSKEAN--GRGTGGFGG 95
GEA + F++ +DA+RA+ R + D +EL+ M++ K + GRG G G
Sbjct: 41 GEAFIIFATDEDARRAISRSGGFIKDSSVELFLSSKAEMQKTIEMKRTDRVGRGRPGSG- 99
Query: 96 VKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA--------------VD 141
G+ +S F+ A S ++ + + +
Sbjct: 100 ------TSGVDSLSNFIESVKEEASNSGYGSSINQDAGFHTNGTGHGNLRPRKTRPLKAE 153
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ L+GLPY ++DV F GL + +G+ + GR G A ++F +A L
Sbjct: 154 NPYLFLRGLPYLVNEDDVRVFFSGLCV--DGVIFLKHHDGRNNGDAIVKFASCVDASGGL 211
Query: 202 LRHKEKIGHRLVTLVMSGA--QW 222
H+ +G R + VM G+ QW
Sbjct: 212 KCHRSFMGSRFIE-VMQGSEQQW 233
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 131 QGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
Q G++ + C+ ++ P++ K +V+KF + + I + +D G G A ++
Sbjct: 388 QKYSQEGNSGQKLCIYIRNFPFDVTKVEVQKFFADFLLAEDDIYLLYDDKGVGLGEALVK 447
Query: 191 FVDKENAEKA-LLRHKEKIGHRLVTLVMSGAQ 221
F +E A KA L + +G ++ ++S AQ
Sbjct: 448 FKSEEQAMKAERLNRRRFLGTEVLLRLISEAQ 479
>gi|355698096|gb|EHH28644.1| RNA-binding motif protein 12B [Macaca mulatta]
gi|355779824|gb|EHH64300.1| RNA-binding motif protein 12B [Macaca fascicularis]
gi|383409041|gb|AFH27734.1| RNA-binding protein 12B [Macaca mulatta]
Length = 1001
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 34/203 (16%)
Query: 44 GEADVEFSSVDDAQRALQRHKSNMGDRYIELY------MEEGTSSKEAN--GRGTGGFGG 95
GEA + F++ +DA+RA+ R + D +EL+ M++ K + GRG G G
Sbjct: 41 GEAFIIFATDEDARRAISRSGGFIKDSSVELFLSSKAEMQKTIEMKRTDRVGRGRPGSGT 100
Query: 96 VKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA--------------VD 141
GVG +S F+ A S ++ + + +
Sbjct: 101 S-----GVG--SLSNFIESVKEEASNSGYGSSINQDAGFHTNGTGHGNLRPRKTRPLKAE 153
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ L+GLPY ++DV F GL + +G+ + GR G A ++F +A L
Sbjct: 154 NPFLFLRGLPYLVNEDDVRVFFSGLCV--DGVIFLKHHDGRNNGDAIVKFASCVDASGGL 211
Query: 202 LRHKEKIGHRLVTLVMSGA--QW 222
H+ +G R + VM G+ QW
Sbjct: 212 KCHRSFMGSRFIE-VMQGSEQQW 233
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 131 QGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
Q G++ + C+ ++ P++ K +V+KF + + I + +D G G A ++
Sbjct: 388 QKYSQEGNSGQKLCIYIRNFPFDVTKVEVQKFFADFLLAEDDIYLLYDDKGVGLGEALVK 447
Query: 191 FVDKENAEKA-LLRHKEKIGHRLVTLVMSGAQ 221
F +E A KA L + +G ++ ++S AQ
Sbjct: 448 FKSEEQAMKAERLNRRRFLGTEVLLRLISEAQ 479
>gi|402878712|ref|XP_003903017.1| PREDICTED: RNA-binding protein 12B isoform 1 [Papio anubis]
gi|402878714|ref|XP_003903018.1| PREDICTED: RNA-binding protein 12B isoform 2 [Papio anubis]
Length = 1001
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 34/203 (16%)
Query: 44 GEADVEFSSVDDAQRALQRHKSNMGDRYIELY------MEEGTSSKEAN--GRGTGGFGG 95
GEA + F++ +DA+RA+ R + D +EL+ M++ K + GRG G G
Sbjct: 41 GEAFIIFATDEDARRAISRSGGFIKDSSVELFLSSKAEMQKTIEMKRTDRVGRGRPGSGT 100
Query: 96 VKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA--------------VD 141
GVG +S F+ A S ++ + + +
Sbjct: 101 S-----GVG--SLSNFIESVKEEASNSGYGSSINQDAGFHTNGTGHGNLRPRKTRPLKAE 153
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ L+GLPY ++DV F GL + +G+ + GR G A ++F +A L
Sbjct: 154 NPFLFLRGLPYLVNEDDVRVFFSGLCV--DGVIFLKHHDGRNNGDAIVKFASCVDASGGL 211
Query: 202 LRHKEKIGHRLVTLVMSGA--QW 222
H+ +G R + VM G+ QW
Sbjct: 212 KCHRSFMGSRFIE-VMQGSEQQW 233
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 131 QGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
Q G++ + C+ ++ P++ K +V+KF + + I + +D G G A ++
Sbjct: 388 QKYSQEGNSGQKLCIYIRNFPFDVTKVEVQKFFADFLLAEDDIYLLYDDKGVGLGEALVK 447
Query: 191 FVDKENAEKA-LLRHKEKIGHRLVTLVMSGAQ 221
F +E A KA L + +G ++ ++S AQ
Sbjct: 448 FKSEEQAMKAERLNRRRFLGTEVLLRLISEAQ 479
>gi|332238333|ref|XP_003268351.1| PREDICTED: RNA-binding protein 12B isoform 1 [Nomascus leucogenys]
gi|332238335|ref|XP_003268352.1| PREDICTED: RNA-binding protein 12B isoform 2 [Nomascus leucogenys]
gi|332238337|ref|XP_003268353.1| PREDICTED: RNA-binding protein 12B isoform 3 [Nomascus leucogenys]
gi|441647142|ref|XP_004090789.1| PREDICTED: RNA-binding protein 12B [Nomascus leucogenys]
gi|441647145|ref|XP_004090790.1| PREDICTED: RNA-binding protein 12B [Nomascus leucogenys]
Length = 1001
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 34/203 (16%)
Query: 44 GEADVEFSSVDDAQRALQRHKSNMGDRYIELY------MEEGTSSKEAN--GRGTGGFGG 95
GEA + F++ +DA+RA+ R + D +EL+ M++ K + GRG G G
Sbjct: 41 GEAFIIFATDEDARRAISRSGGFIKDSSVELFLSSKAEMQKTIEMKRTDRVGRGRPGSGT 100
Query: 96 VKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA--------------VD 141
GVG +S F+ A S ++ + + +
Sbjct: 101 S-----GVG--SLSNFIESVKEEASNSGYGSSINQDAGFHTNGTGHGNLKPRKTRPLKAE 153
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ L+GLPY ++DV F GL + +G+ + GR G A ++F +A L
Sbjct: 154 NPYLFLRGLPYLVNEDDVRVFFSGLCV--DGVIFLKHHDGRNNGDAIVKFASCVDASGGL 211
Query: 202 LRHKEKIGHRLVTLVMSGA--QW 222
H+ +G R + VM G+ QW
Sbjct: 212 KCHRSFMGSRFIE-VMQGSEQQW 233
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 131 QGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
Q G++ + C+ ++ P++ K +V+KF + + I + +D G G A ++
Sbjct: 388 QKYSQEGNSGQKLCIYIRNFPFDVTKVEVQKFFADFLLAEDDIYLLYDDKGVGLGEALVK 447
Query: 191 FVDKENAEKA-LLRHKEKIGHRLVTLVMSGAQ 221
F +E A KA L + +G ++ ++S AQ
Sbjct: 448 FKSEEQAMKAERLNRRRFLGTEVLLRLISEAQ 479
>gi|56753603|gb|AAW25004.1| SJCHGC02919 protein [Schistosoma japonicum]
gi|226487876|emb|CAX75603.1| Heterogeneous nuclear ribonucleoprotein H' [Schistosoma japonicum]
Length = 137
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+R++GLP+ +D+ F + I GI P GR G A+I+ K++ EKA+
Sbjct: 5 VRIRGLPFSANADDIINFFKDCTIRGGKRGIYFPQGPNGRSNGEAFIELDSKDDKEKAMA 64
Query: 203 RHKEKIGHRLVTLVMSGAQ 221
H E +G R + + S ++
Sbjct: 65 HHNEHMGRRYIEVFDSCSE 83
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGF 93
GRS+GEA +E S DD ++A+ H +MG RYIE++ + S + N G+ F
Sbjct: 43 GRSNGEAFIELDSKDDKEKAMAHHNEHMGRRYIEVF--DSCSEELNNAMGSRPF 94
>gi|74096255|ref|NP_001027771.1| swan [Ciona intestinalis]
gi|31324620|gb|AAP48572.1| swan [Ciona intestinalis]
Length = 1075
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 81/185 (43%), Gaps = 19/185 (10%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + D+ GR++G ++F +V D + ALQ+ + +G R+I + T+S E
Sbjct: 94 IRFMLDEKGRNNGTCLIKFKTVVDKEDALQKDRKYLGGRFIRI-----TTSSERQWLLVS 148
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
C + + +R+K ++ LS ++ C+ ++GLP
Sbjct: 149 TQS------------CETIRPGESRKRSKTITSSENTPKRSRALS-PLKNENCVEVRGLP 195
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ F GL IV G+ I +D C G A+++F + + AL+R + I +
Sbjct: 196 QNADYHIMSGFFSGLNIVDGGLFIEND-GKICKGRAFVEFAAYADYKNALVRDGDMIDGK 254
Query: 212 LVTLV 216
V ++
Sbjct: 255 QVRVI 259
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 17/112 (15%)
Query: 128 LKRQGAVLSGSAVD---QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCT 184
+K+Q S D C +R+ P+ C +E V KF I +GI + GR +
Sbjct: 611 VKKQSNEPQKSVSDIKQSCLVRIANSPFNCTEEAVRKFFSDFSIPHDGIQFVYK-GGRRS 669
Query: 185 GVAYIQFVDKENAEKALLRHKEKIGHRLVTL-------------VMSGAQWF 223
G +++F + ++A KA LR +++ R V + +SG WF
Sbjct: 670 GHIFVKFSNADDAVKAALRDNQRMMGRNVLVGQSSVAQMKEIHHRISGEHWF 721
>gi|194043009|ref|XP_001928191.1| PREDICTED: probable RNA-binding protein 19 [Sus scrofa]
Length = 967
Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 40/64 (62%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+F P+ PV I ++ + G +G V+FSS ++ ++ALQ ++ MG RYIE++ E+
Sbjct: 319 EFLAPLKPVAIRIVRNAHGNKTGYVFVDFSSEEEVKKALQCNREYMGGRYIEVFREKSIP 378
Query: 82 SKEA 85
+ +A
Sbjct: 379 TAKA 382
Score = 38.5 bits (88), Expect = 3.6, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
++L+G P+ +++V +FL L+ P I I + G TG ++ F +E +KAL +
Sbjct: 303 VKLRGAPFNVTEKNVMEFLAPLK--PVAIRIVRNAHGNKTGYVFVDFSSEEEVKKALQCN 360
Query: 205 KEKIGHRLV 213
+E +G R +
Sbjct: 361 REYMGGRYI 369
>gi|255077464|ref|XP_002502372.1| predicted protein [Micromonas sp. RCC299]
gi|226517637|gb|ACO63630.1| predicted protein [Micromonas sp. RCC299]
Length = 202
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 12/101 (11%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFV-DKENAEKALLR 203
+RL+ +PYE K DV F G+ + + + I D TG A+++F D N +AL++
Sbjct: 112 LRLRSVPYEATKTDVVNFFYGMGVTEDKVKIVLDANSASTGEAFVEFSGDDANISQALMK 171
Query: 204 HKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPV 244
+ +G R V + S + + R+ + G P+
Sbjct: 172 DRAVLGSRCVEMFRSSLE-----------EVQRMAMMGRPL 201
>gi|300122335|emb|CBK22907.2| unnamed protein product [Blastocystis hominis]
Length = 546
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 7/60 (11%)
Query: 23 FFKPI-VP------VNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
FF P+ VP + I++ D+ R SGEA V FSSV+D+ + L+ H N+G RYIE++
Sbjct: 453 FFAPLEVPRDAKGELTIVIGQDNKQRPSGEAFVTFSSVEDSAKGLEYHLKNLGKRYIEIF 512
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNG-----ITIPHDYAGRCTGVAYIQFVDKENAEK 199
++L+GLPY KE++ F LE+ + I I D R +G A++ F E++ K
Sbjct: 436 LKLRGLPYTATKEEIAAFFAPLEVPRDAKGELTIVIGQDNKQRPSGEAFVTFSSVEDSAK 495
Query: 200 ALLRHKEKIGHRLVTL 215
L H + +G R + +
Sbjct: 496 GLEYHLKNLGKRYIEI 511
>gi|242022416|ref|XP_002431636.1| RNA-binding protein, putative [Pediculus humanus corporis]
gi|212516944|gb|EEB18898.1| RNA-binding protein, putative [Pediculus humanus corporis]
Length = 966
Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 40/72 (55%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++ LP E D+ F + +VPN I + D +G+ +G A+ +F D AEKA +
Sbjct: 784 CVLMKNLPLEANDRDICDFFSDIGLVPNKIHLMLDTSGQPSGDAFCEFSDLNQAEKACTK 843
Query: 204 HKEKIGHRLVTL 215
+ +G +V++
Sbjct: 844 NSAHLGKNIVSV 855
Score = 39.7 bits (91), Expect = 1.6, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RLQ LP+ D+ + GL I G+ I G G A+I F E+A +A++
Sbjct: 5 IRLQNLPWSANSLDIRHYFRGLSIPEGGVHI----VGGEMGDAFIAFSTDEDARQAMMLA 60
Query: 205 KEKIGHRLVTLVMS 218
KI ++L++S
Sbjct: 61 GGKIKEVQISLMLS 74
Score = 37.7 bits (86), Expect = 5.8, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 23 FFKPI--VPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FF I VP I L+ D +G+ SG+A EFS ++ A++A ++ +++G + + +
Sbjct: 802 FFSDIGLVPNKIHLMLDTSGQPSGDAFCEFSDLNQAEKACTKNSAHLGKNIVSVTKVHQS 861
Query: 81 SSKEANG 87
EA G
Sbjct: 862 EMMEALG 868
>gi|388507286|gb|AFK41709.1| unknown [Lotus japonicus]
Length = 163
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
++++GLP+ K + F + +++ + + I G+ TG AY++FV + A++A+ +
Sbjct: 76 LKMRGLPFAVTKSQIVDFFKDYKLIEDRVHIACRPDGKATGEAYVEFVSPDEAKRAMSKD 135
Query: 205 KEKIGHRLVTLVMS 218
K IG R V L S
Sbjct: 136 KMMIGSRYVELFPS 149
Score = 44.3 bits (103), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRG 89
G+++GEA VEF S D+A+RA+ + K +G RY+EL+ ++ A R
Sbjct: 112 GKATGEAYVEFVSPDEAKRAMSKDKMMIGSRYVELFPSTPDEARRAESRS 161
>gi|449284118|gb|EMC90699.1| RNA-binding protein 12B [Columba livia]
Length = 698
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 82/196 (41%), Gaps = 12/196 (6%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF I ++L+ G S+G+ V+F++ DA LQRH+ MG R+IE+
Sbjct: 193 FFSGIHVDGVILIKHRNGLSNGDCLVKFATPGDALEGLQRHRQYMGQRFIEISPSTEERW 252
Query: 83 KEANGRGTGGFGGVKSTPYGVGIFCI---SQFLAKWMRRAKRSEMDWALKRQGAVLSGSA 139
E +GG P + F S + +M K S + +RQ
Sbjct: 253 IE--------YGGTVDMPNEMDHFLCEDRSPRSSGYMHSRKHSH-SRSPRRQRTRSRSPP 303
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
+ + L+ L +K D+ F L+I I + D R T A++ + + +
Sbjct: 304 TQEYYIHLRNLSTNVEKRDLRDFFPDLDICSKQIKLLTDKHQRRTRDAFVLLRSERDYQA 363
Query: 200 ALLRHKEKIGHRLVTL 215
AL H++ + +R V +
Sbjct: 364 ALECHRKVLLNRPVYI 379
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 80/211 (37%), Gaps = 40/211 (18%)
Query: 44 GEADVEFSSVDDAQRALQRHKSNMGDRYIELY------------------------MEEG 79
GEA + F++ +DA+RA+ + D IEL+ M G
Sbjct: 41 GEAFIIFATDEDARRAMSCSGGFIKDSRIELFLSSKAEMQNTIEMSRRQFGRGGREMMSG 100
Query: 80 TSSKEANGRGTGGFG-----------GVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWAL 128
+ NG G G G G+ YG + F R +
Sbjct: 101 SRRTGTNGSGASGVGDFPHVVPVFPKGMSKPDYGPPNHPEAGFHTNGTRHGDMGMPKSSY 160
Query: 129 K-RQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVA 187
+ R+G+ D + L+G+PY +++V F G+ + +G+ + G G
Sbjct: 161 QSRKGS--HPFNPDDLYLYLRGIPYSATEDEVRAFFSGIHV--DGVILIKHRNGLSNGDC 216
Query: 188 YIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
++F +A + L RH++ +G R + + S
Sbjct: 217 LVKFATPGDALEGLQRHRQYMGQRFIEISPS 247
>gi|187953621|gb|AAI37621.1| C430048L16Rik protein [Mus musculus]
Length = 834
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 23/201 (11%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME---EGTSSKEANGRGTGGFGGV 96
G GEA + F++ +DA+RA+ R + D +EL++ E + E G G
Sbjct: 37 GGKVGEAFIIFATDEDARRAISRSGGFIKDSSVELFLSSKVEMQKTIEMKRTARVGRGRP 96
Query: 97 KSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQ-GAVLSGSAVD------------QC 143
S GVG + F S ++ R G +G+ +D
Sbjct: 97 GSGASGVG--NVYHFSDALKEEESYSGYGSSVNRDAGFHTNGTGLDLRPRKTRPLKAENP 154
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+ L+GLPY ++DV F GL + +G+ + + GR G A ++F +A L
Sbjct: 155 YLFLRGLPYLVNEDDVRVFFSGLCV--DGVILLKHHDGRNNGDAIVKFASCVDASGGLKC 212
Query: 204 HKEKIGHRLVTLVMSGA--QW 222
H+ +G R + VM G+ QW
Sbjct: 213 HRSFMGSRFIE-VMQGSEQQW 232
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 80/193 (41%), Gaps = 11/193 (5%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF + ++LL GR++G+A V+F+S DA L+ H+S MG R+IE+ +G+
Sbjct: 173 FFSGLCVDGVILLKHHDGRNNGDAIVKFASCVDASGGLKCHRSFMGSRFIEVM--QGSEQ 230
Query: 83 KEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQ 142
+ GT GG + + R+ S+ A R
Sbjct: 231 QWIEFGGTATEGGDTPRMRSEEHSPSRRINGRHFRKRSHSKSPRARSRSPLGF------- 283
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+ L+ L K D+ ++ + I + R T A++ F ++++ AL
Sbjct: 284 -YVHLKNLSLNTNKRDLRNLFRDTDLTNDQIKFVYK-DERRTRYAFVMFKNQKDYNTALG 341
Query: 203 RHKEKIGHRLVTL 215
HK + +R V +
Sbjct: 342 LHKTVLQYRPVLI 354
>gi|71067349|ref|NP_945195.1| RNA-binding protein 12B-B [Mus musculus]
gi|341941784|sp|Q66JV4.2|R12BB_MOUSE RecName: Full=RNA-binding protein 12B-B; AltName: Full=RNA-binding
motif protein 12B-B
gi|26348891|dbj|BAC38085.1| unnamed protein product [Mus musculus]
Length = 834
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 23/201 (11%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME---EGTSSKEANGRGTGGFGGV 96
G GEA + F++ +DA+RA+ R + D +EL++ E + E G G
Sbjct: 37 GGKVGEAFIIFATDEDARRAISRSGGFIKDSSVELFLSSKVEMQKTIEMKRTARVGRGRP 96
Query: 97 KSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQ-GAVLSGSAVD------------QC 143
S GVG + F S ++ R G +G+ +D
Sbjct: 97 GSGASGVG--NVYHFSDALKEEESYSGYGSSVNRDAGFHTNGTGLDLRPRKTRPLKAENP 154
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+ L+GLPY ++DV F GL + +G+ + + GR G A ++F +A L
Sbjct: 155 YLFLRGLPYLVNEDDVRVFFSGLCV--DGVILLKHHDGRNNGDAIVKFASCVDASGGLKC 212
Query: 204 HKEKIGHRLVTLVMSGA--QW 222
H+ +G R + VM G+ QW
Sbjct: 213 HRSFMGSRFIE-VMQGSEQQW 232
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 80/193 (41%), Gaps = 11/193 (5%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF + ++LL GR++G+A V+F+S DA L+ H+S MG R+IE+ +G+
Sbjct: 173 FFSGLCVDGVILLKHHDGRNNGDAIVKFASCVDASGGLKCHRSFMGSRFIEVM--QGSEQ 230
Query: 83 KEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQ 142
+ GT GG + + R+ S+ A R
Sbjct: 231 QWIEFGGTATEGGDTPRMRSEEHSPSRRINGRHFRKRSHSKSPRARSRSPLGF------- 283
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+ L+ L K D+ ++ + I + R T A++ F ++++ AL
Sbjct: 284 -YVHLKNLSLNTNKRDLRNLFRDTDLTNDQIKFVYK-DERRTRYAFVMFKNQKDYNTALG 341
Query: 203 RHKEKIGHRLVTL 215
HK + +R V +
Sbjct: 342 LHKTVLQYRPVLI 354
>gi|118401869|ref|XP_001033254.1| hypothetical protein TTHERM_00419990 [Tetrahymena thermophila]
gi|89287602|gb|EAR85591.1| hypothetical protein TTHERM_00419990 [Tetrahymena thermophila SB210]
Length = 1468
Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYA-GRCTGVAYIQFVDKENAEKALLR 203
+R++GLPY CK +++ +F + EIV +G+ ++Y + TG ++I +K+ +A +
Sbjct: 1286 LRIRGLPYSCKTKEIYEFFKDFEIVQDGVKRVYNYQEQKQTGESFIILKNKDQVREAKQK 1345
Query: 204 -HKEKIGHRLVTLVMSGAQWFL 224
H E+I R + + S FL
Sbjct: 1346 LHGERIFQRYIEVFQSDPNEFL 1367
>gi|172088112|ref|NP_082502.2| RNA-binding protein 12B-A [Mus musculus]
gi|124020998|sp|Q80YR9.2|R12BA_MOUSE RecName: Full=RNA-binding protein 12B-A; AltName: Full=RNA-binding
motif protein 12B-A
Length = 836
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 19/199 (9%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS-SKEANGRGTGGFGGVKS 98
G GEA + F++ +DA+RA+ R + D +EL++ K + T G +
Sbjct: 37 GGKVGEAFIIFATDEDARRAISRSGGFIKDSSVELFLSSKVEMQKTIEMKRTARVGRGRP 96
Query: 99 TPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQ-GAVLSGSAVD------------QCCM 145
G+ + F S ++ R G +G+ +D +
Sbjct: 97 GSGASGVGNVYHFSDALKEEESYSGYGSSVNRDAGFHTNGTGLDLRPRKTRPLKAENPYL 156
Query: 146 RLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHK 205
L+GLPY ++DV F GL + +G+ + + GR G A ++F +A L H+
Sbjct: 157 FLRGLPYLVNEDDVRVFFSGLCV--DGVILLKHHDGRNNGDAIVKFASCVDASGGLKCHR 214
Query: 206 EKIGHRLVTLVMSGA--QW 222
+G R + VM G+ QW
Sbjct: 215 SFMGSRFIE-VMQGSEQQW 232
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 80/193 (41%), Gaps = 11/193 (5%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF + ++LL GR++G+A V+F+S DA L+ H+S MG R+IE+ +G+
Sbjct: 173 FFSGLCVDGVILLKHHDGRNNGDAIVKFASCVDASGGLKCHRSFMGSRFIEVM--QGSEQ 230
Query: 83 KEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQ 142
+ GT GG + + R+ S+ A R
Sbjct: 231 QWIEFGGTATEGGDTPRMRSEEHSPSRRINGRHFRKRSHSKSPRARSRSPLGF------- 283
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+ L+ L K D+ ++ + I + R T A++ F ++++ AL
Sbjct: 284 -YVHLKNLSLNTNKRDLRNLFRDTDLTNDQIKFVYK-DERRTRYAFVMFKNQKDYNTALG 341
Query: 203 RHKEKIGHRLVTL 215
HK + +R V +
Sbjct: 342 LHKTVLQYRPVLI 354
>gi|300120417|emb|CBK19971.2| unnamed protein product [Blastocystis hominis]
Length = 378
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 7/60 (11%)
Query: 23 FFKPI-VP------VNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
FF P+ VP + I++ D+ R SGEA V FSSV+D+ + L+ H N+G RYIE++
Sbjct: 276 FFAPLEVPRDAKGELTIVIGQDNLQRPSGEAFVTFSSVEDSAKGLEYHLKNLGKRYIEIF 335
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNG-----ITIPHDYAGRCTGVAYIQFVDKENA 197
++L+GLPY KE++ F LE+ + I I D R +G A++ F E++
Sbjct: 257 TTLKLRGLPYTATKEEIAAFFAPLEVPRDAKGELTIVIGQDNLQRPSGEAFVTFSSVEDS 316
Query: 198 EKALLRHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVRSTI-CVLCH 253
K L H + +G R + + PL N+ R + G + I C +C+
Sbjct: 317 AKGLEYHLKNLGKRYIEIF----------PLFNKDYYRRSEWRGRRAKYMIYCSICN 363
>gi|148673677|gb|EDL05624.1| mCG123728, isoform CRA_a [Mus musculus]
gi|148673678|gb|EDL05625.1| mCG123728, isoform CRA_a [Mus musculus]
gi|148673679|gb|EDL05626.1| mCG123728, isoform CRA_a [Mus musculus]
Length = 834
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 19/199 (9%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS-SKEANGRGTGGFGGVKS 98
G GEA + F++ +DA+RA+ R + D +EL++ K + T G +
Sbjct: 37 GGKVGEAFIIFATDEDARRAISRSGGFIKDSSVELFLSSKVEMQKTIEMKRTARVGRGRP 96
Query: 99 TPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQ-GAVLSGSAVD------------QCCM 145
G+ + F S ++ R G +G+ +D +
Sbjct: 97 GSGASGVGNVYHFSDALKEEESYSGYGSSVNRDAGFHTNGTGLDLRPRKTRPLKAENPYL 156
Query: 146 RLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHK 205
L+GLPY ++DV F GL + +G+ + + GR G A ++F +A L H+
Sbjct: 157 FLRGLPYLVNEDDVRVFFSGLCV--DGVILLKHHDGRNNGDAIVKFASCVDASGGLKCHR 214
Query: 206 EKIGHRLVTLVMSGA--QW 222
+G R + VM G+ QW
Sbjct: 215 SFMGSRFIE-VMQGSEQQW 232
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 80/193 (41%), Gaps = 11/193 (5%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF + ++LL GR++G+A V+F+S DA L+ H+S MG R+IE+ +G+
Sbjct: 173 FFSGLCVDGVILLKHHDGRNNGDAIVKFASCVDASGGLKCHRSFMGSRFIEVM--QGSEQ 230
Query: 83 KEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQ 142
+ GT GG + + R+ S+ A R
Sbjct: 231 QWIEFGGTATEGGDTPRMRSEEHSPSRRINGRHFRKRSHSKSPRARSRSPLGF------- 283
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+ L+ L K D+ ++ + I + R T A++ F ++++ AL
Sbjct: 284 -YVHLKNLSLNTNKRDLRNLFRDTDLTNDQIKFVYKDERR-TRYAFVMFKNQKDYNTALG 341
Query: 203 RHKEKIGHRLVTL 215
HK + +R V +
Sbjct: 342 LHKTVLQYRPVLI 354
>gi|29747798|gb|AAH50844.1| RNA binding motif protein 12B [Mus musculus]
Length = 836
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 19/199 (9%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS-SKEANGRGTGGFGGVKS 98
G GEA + F++ +DA+RA+ R + D +EL++ K + T G +
Sbjct: 37 GGKVGEAFIIFATDEDARRAISRSGGFIKDSSVELFLSSKVEMQKTIEMKRTARVGRGRP 96
Query: 99 TPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQ-GAVLSGSAVD------------QCCM 145
G+ + F S ++ R G +G+ +D +
Sbjct: 97 GSGASGVGNVYHFSDALKEEESYSGYGSSVNRDAGFHTNGTGLDLRPRKTRPLKAENPYL 156
Query: 146 RLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHK 205
L+GLPY ++DV F GL + +G+ + + GR G A ++F +A L H+
Sbjct: 157 FLRGLPYLVNEDDVRVFFSGLCV--DGVILLKHHDGRNNGDAIVKFASCVDASGGLKCHR 214
Query: 206 EKIGHRLVTLVMSGA--QW 222
+G R + VM G+ QW
Sbjct: 215 SFMGSRFIE-VMQGSEQQW 232
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 80/193 (41%), Gaps = 11/193 (5%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF + ++LL GR++G+A V+F+S DA L+ H+S MG R+IE+ +G+
Sbjct: 173 FFSGLCVDGVILLKHHDGRNNGDAIVKFASCVDASGGLKCHRSFMGSRFIEVM--QGSEQ 230
Query: 83 KEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQ 142
+ GT GG + + R+ S+ A R
Sbjct: 231 QWIEFGGTATEGGDTPRMRSEEHSPSRRINGRHFRKRSHSKSPRARSRSPLGF------- 283
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+ L+ L K D+ ++ + I + R T A++ F ++++ AL
Sbjct: 284 -YVHLKNLSLNTNKRDLRNLFRDTDLTNDQIKFVYK-DERRTRYAFVMFKNQKDYNTALG 341
Query: 203 RHKEKIGHRLVTL 215
HK + +R V +
Sbjct: 342 LHKTVLQYRPVLI 354
>gi|311253626|ref|XP_003125614.1| PREDICTED: RNA-binding protein 12B [Sus scrofa]
Length = 986
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 82/200 (41%), Gaps = 20/200 (10%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM-EEGTSSKEANGRGTGGFGGVKS 98
G GEA + F++ +DA+RA+ R + D +EL++ + K + T G +
Sbjct: 37 GGEVGEAFIIFATDEDARRAISRSGGFIKDSSVELFLSSKAEMQKTIEMKRTDRMGRDRP 96
Query: 99 TPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA--------------VDQCC 144
G+ +S F+ A S + + + +
Sbjct: 97 GSGAPGVGSLSNFVEALKEEASNSGYGSPINQDAGFHTNGTGHGDLRPRKTRPLKAENPY 156
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+ L+GLPY ++DV F GL + +G+ + GR G A ++F +A L H
Sbjct: 157 LFLRGLPYLVNEDDVRVFFSGLCV--DGVIFLKHHDGRNNGDAIVKFASCIDASGGLKCH 214
Query: 205 KEKIGHRLVTLVMSGA--QW 222
+ +G R + VM G+ QW
Sbjct: 215 RSFMGSRFIE-VMQGSEQQW 233
>gi|426360209|ref|XP_004047340.1| PREDICTED: RNA-binding protein 12B isoform 1 [Gorilla gorilla
gorilla]
gi|426360211|ref|XP_004047341.1| PREDICTED: RNA-binding protein 12B isoform 2 [Gorilla gorilla
gorilla]
gi|426360213|ref|XP_004047342.1| PREDICTED: RNA-binding protein 12B isoform 3 [Gorilla gorilla
gorilla]
gi|426360215|ref|XP_004047343.1| PREDICTED: RNA-binding protein 12B isoform 4 [Gorilla gorilla
gorilla]
gi|426360217|ref|XP_004047344.1| PREDICTED: RNA-binding protein 12B isoform 5 [Gorilla gorilla
gorilla]
gi|426360219|ref|XP_004047345.1| PREDICTED: RNA-binding protein 12B isoform 6 [Gorilla gorilla
gorilla]
Length = 1001
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 84/203 (41%), Gaps = 34/203 (16%)
Query: 44 GEADVEFSSVDDAQRALQRHKSNMGDRYIELY------MEEGTSSKEAN--GRGTGGFGG 95
GEA + F++ +DA+RA+ R + D +EL+ M++ K + GRG G G
Sbjct: 41 GEAFIIFATDEDARRAISRSGGFIKDSSVELFLSSKAEMQKTIEMKRTDRVGRGRPGSG- 99
Query: 96 VKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA--------------VD 141
G+ +S F A S ++ + + +
Sbjct: 100 ------TSGVDSLSNFTESVKEEASNSGYGSSINQDAGFHTNGTGHGNLRPRKTRPLKAE 153
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ L+GLPY ++DV F GL + +G+ + GR G A ++F +A L
Sbjct: 154 NPYLFLRGLPYLVNEDDVRVFFSGLCV--DGVIFLKHHDGRNNGDAIVKFASCVDASGGL 211
Query: 202 LRHKEKIGHRLVTLVMSGA--QW 222
H+ +G R + VM G+ QW
Sbjct: 212 KCHRSFMGSRFIE-VMQGSEQQW 233
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 131 QGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
Q G++ + C+ ++ P++ K +V+KF + + I + +D G G A ++
Sbjct: 388 QKYSQEGNSGQKLCIYIRNFPFDVTKVEVQKFFADFLLAEDDIYLLYDDKGVGLGEALVK 447
Query: 191 FVDKENAEKA-LLRHKEKIGHRLVTLVMSGAQ 221
F +E A KA L + +G ++ ++S AQ
Sbjct: 448 FKSEEQAVKAERLNRRRFLGTEVLLRLISEAQ 479
>gi|51593298|gb|AAH80741.1| C430048L16Rik protein [Mus musculus]
Length = 834
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 19/199 (9%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS-SKEANGRGTGGFGGVKS 98
G GEA + F++ +DA+RA+ R + D +EL++ K + T G +
Sbjct: 37 GGKVGEAFIIFATDEDARRAISRSGGFIKDSSVELFLSSKVEMQKTIEMKRTARVGRGRP 96
Query: 99 TPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQ-GAVLSGSAVD------------QCCM 145
G+ + F S ++ R G +G+ +D +
Sbjct: 97 GSGASGVGNVYHFSDALKEEESYSGYGSSVNRDAGFHTNGTGLDLRPRKTRPLKAENPYL 156
Query: 146 RLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHK 205
L+GLPY +DV F GL + +G+ + + GR G A ++F +A L H+
Sbjct: 157 FLRGLPYLVNDDDVRVFFSGLCV--DGVILLKHHDGRNNGDAIVKFASCVDASGGLKCHR 214
Query: 206 EKIGHRLVTLVMSGA--QW 222
+G R + VM G+ QW
Sbjct: 215 SFMGSRFIE-VMQGSEQQW 232
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 80/193 (41%), Gaps = 11/193 (5%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF + ++LL GR++G+A V+F+S DA L+ H+S MG R+IE+ +G+
Sbjct: 173 FFSGLCVDGVILLKHHDGRNNGDAIVKFASCVDASGGLKCHRSFMGSRFIEVM--QGSEQ 230
Query: 83 KEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQ 142
+ GT GG + + R+ S+ A R
Sbjct: 231 QWIEFGGTATEGGDTPRMRSEEHSPSRRINGRHFRKRSHSKSPRARSRSPLGF------- 283
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+ L+ L K D+ ++ + I + R T A++ F ++++ AL
Sbjct: 284 -YVHLKNLSLNTNKRDLRNLFRDTDLTNDQIKFVYK-DERRTRYAFVMFKNQKDYNTALG 341
Query: 203 RHKEKIGHRLVTL 215
HK + +R V +
Sbjct: 342 LHKTVLQYRPVLI 354
>gi|401410426|ref|XP_003884661.1| GL11864, related [Neospora caninum Liverpool]
gi|325119079|emb|CBZ54631.1| GL11864, related [Neospora caninum Liverpool]
Length = 503
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 91/201 (45%), Gaps = 39/201 (19%)
Query: 23 FFKPIVPV---NILLLTDDAGRSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELYMEE 78
FFKP+V + N+L+ R++GEA V+ ++A++ H +G R+IE++
Sbjct: 72 FFKPVVALENDNVLICIGFDKRTTGEAYVQLPDPGLREQAIKDLHGRLLGTRWIEVFRAS 131
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
++A+ R +++ M ++ +
Sbjct: 132 EEEFQKADDR-------------------------------RKTVMAAISGNTDSLDASR 160
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLE---GLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
++ ++L+GLP+ C + ++ +F + G EI + + + GR +G+A+++ E
Sbjct: 161 RMNLNVVKLRGLPWSCSESEIVRFFKAEGGFEIHNDDVVLGVTGDGRLSGIAFVELPSPE 220
Query: 196 NAEKAL-LRHKEKIGHRLVTL 215
AEKA + HK+ +G R + +
Sbjct: 221 VAEKAREVLHKKYMGRRFIEV 241
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 8/82 (9%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLE---IVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+RL+GLPY ++ + +F G I+P+ TIP D GR +G AY+QFVD A +A
Sbjct: 405 VLRLRGLPYSANEQHIVQFFNGFHMAAILPS--TIPID--GRPSGEAYVQFVDAAEAFRA 460
Query: 201 L-LRHKEKIGHRLVTLVMSGAQ 221
++ ++ R++ L S Q
Sbjct: 461 FQAKNGARMDKRMIELFPSSKQ 482
>gi|19173032|ref|NP_597583.1| NUCLEOLAR PROTEIN OF THE GAR FAMILY [Encephalitozoon cuniculi
GB-M1]
gi|449329681|gb|AGE95951.1| nucleolar protein of the gar family [Encephalitozoon cuniculi]
Length = 293
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 15/97 (15%)
Query: 120 KRSEMDWALKRQGAVLSGSAV-----------DQCCMRLQGLPYECKKEDVEKFLEGL-E 167
K ++ ALK G V G V ++ + + +PYEC K D++K+ EG+ E
Sbjct: 137 KEEDVKKALKLDGTVFLGREVVVNMAHPRANKERHTIYVSNIPYECDKRDLKKYFEGMGE 196
Query: 168 IVPNGITIPHDY-AGRCTGVAYIQFVDKENAEKALLR 203
+V G+++P+D R G ++ F +KE+ E+ L +
Sbjct: 197 VV--GMSLPYDRDNNRLKGYGFVDFGNKEDYERVLKK 231
>gi|345793203|ref|XP_544177.3| PREDICTED: RNA-binding protein 12B [Canis lupus familiaris]
Length = 994
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 80/196 (40%), Gaps = 20/196 (10%)
Query: 44 GEADVEFSSVDDAQRALQRHKSNMGDRYIELYM-EEGTSSKEANGRGTGGFGGVKSTPYG 102
GEA + F++ +DA+RA+ R + D +EL++ + K R T G +
Sbjct: 41 GEAFIIFATDEDARRAISRSGGFIKDSSVELFLSSKAEMQKTIEMRRTDRIGRERPGSGA 100
Query: 103 VGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA--------------VDQCCMRLQ 148
G +S F+ A S + + + + + L+
Sbjct: 101 SGAGSLSNFVEAIKEEASNSGYGSPINQDAGFHTNGTGHGDLRPRKTRPLKAENPYLFLR 160
Query: 149 GLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKI 208
GLPY ++DV F GL + +G+ + GR G A ++F +A L H+ +
Sbjct: 161 GLPYLVNEDDVRVFFSGLCV--DGVIFLKHHDGRNNGDAIVKFASCIDASGGLKCHRSFM 218
Query: 209 GHRLVTLVMSGA--QW 222
G R + VM G+ QW
Sbjct: 219 GSRFIE-VMQGSEQQW 233
>gi|159164063|pdb|2DB1|A Chain A, Solution Structure Of The Rna Binding Domain In
Heterogeneous Nuclear Ribonucleoprotein F Homolog
Length = 118
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 132 GAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYI 189
G +L + ++L+GLP+ C EDV+ FL I G+ + GR +G A++
Sbjct: 7 GMMLGPEGGEGYVVKLRGLPWSCSIEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFV 66
Query: 190 QFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+ +++ + AL + +E +GHR + + S
Sbjct: 67 ELESEDDVKLALKKDRESMGHRYIEVFKS 95
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
GR SGEA VE S DD + AL++ + +MG RYIE++
Sbjct: 58 GRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVF 93
>gi|290977130|ref|XP_002671291.1| predicted protein [Naegleria gruberi]
gi|284084859|gb|EFC38547.1| predicted protein [Naegleria gruberi]
Length = 666
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 89/207 (42%), Gaps = 60/207 (28%)
Query: 30 VNILLLTDDAGRSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELYMEEGTSSKEANGR 88
++I+L+ + G+S+GEA V F S ++ ++A + K N+G RYIE++
Sbjct: 191 MDIILMLNYFGKSTGEAYVRFESEEELEKARKTMDKKNLGSRYIEIF------------- 237
Query: 89 GTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQ 148
KST + M ++R L+R L+ S + ++++
Sbjct: 238 --------KST-------------IEEMEHSRR-----VLERNLKNLNNSKI----LKMR 267
Query: 149 GLPYECKKEDVEKFLEGLEIVP----NGITIPHD------------YAGRCTGVAYIQFV 192
+P+ ++++E F GL I N ++ G+ TG +++F
Sbjct: 268 NVPFSATEDEIETFFSGLTIATVQSRNQAEQSNETRRRKVYFVLNPMNGKRTGEVFVEFT 327
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSG 219
+ +A R+KEKI +R + L S
Sbjct: 328 CHDQMLQAAKRNKEKIRNRYIELFHSS 354
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYA-GRCTGVAYIQFVDKENAEKAL- 201
++++GLP+ ++++ +F G + + I D+ R TG+ YI+F K AE+A
Sbjct: 586 TLKMRGLPFSSTEKEIAEFFAGYDFEEDSIRFKMDFKRNRQTGICYIRFRTKTEAERAAN 645
Query: 202 LRHKEKIGHRLVTL 215
R++ IG R + L
Sbjct: 646 ERNRCNIGDRYIEL 659
>gi|322790727|gb|EFZ15471.1| hypothetical protein SINV_06272 [Solenopsis invicta]
Length = 933
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 4/130 (3%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++ +P D+ G+ I +G+ I +D G G+AYI+F E E AL
Sbjct: 496 CVEVRNMPLSATYADLRHAFHGIYIRKDGMKIINDNHGNRVGMAYIKFGKSEGKELALST 555
Query: 204 HKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLD-LTGSPVRSTICVLCHPLTPRSVRP 262
+ G + L + + + + +P +R D + G VR+++C+L L P +
Sbjct: 556 TRYVRGSEVEVLDLD--ESIFDKAVNSYSPENREDGIDGGDVRNSMCILLTDL-PSFTKE 612
Query: 263 RSVRQSEHEW 272
+ + H+W
Sbjct: 613 MDIAKLFHDW 622
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 138 SAVDQC-CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
++++Q C+ ++GLP++ D+ F + IVP I + + G+ G + +F E
Sbjct: 687 ASINQTDCILMRGLPFQTIDRDIFDFFSDIGIVPLCIHMMLNQQGKPAGECFCEFDSAEK 746
Query: 197 AEKALLRHKEKIGHRLVTL 215
AE+A+ ++ +G + T+
Sbjct: 747 AERAITKNGLPLGKNIPTI 765
>gi|112491340|pdb|2HGL|A Chain A, Nmr Structure Of The First Qrrm Domain Of Human Hnrnp F
gi|297787485|pdb|2KFY|A Chain A, Nmr Structure Of The First Qrrm Of Hnrnp F In Complex With
Agggau G- Tract Rna
Length = 136
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 128 LKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTG 185
+ R +L + ++L+GLP+ C EDV+ FL I G+ + GR +G
Sbjct: 30 MGRGSMMLGPEGGEGFVVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSG 89
Query: 186 VAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
A+++ +++ + AL + +E +GHR + + S
Sbjct: 90 EAFVELGSEDDVKMALKKDRESMGHRYIEVFKS 122
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
GR SGEA VE S DD + AL++ + +MG RYIE++
Sbjct: 85 GRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVF 120
>gi|392512575|emb|CAD26218.2| NUCLEOLAR PROTEIN OF THE GAR FAMILY [Encephalitozoon cuniculi
GB-M1]
Length = 270
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 15/97 (15%)
Query: 120 KRSEMDWALKRQGAVLSGSAV-----------DQCCMRLQGLPYECKKEDVEKFLEGL-E 167
K ++ ALK G V G V ++ + + +PYEC K D++K+ EG+ E
Sbjct: 114 KEEDVKKALKLDGTVFLGREVVVNMAHPRANKERHTIYVSNIPYECDKRDLKKYFEGMGE 173
Query: 168 IVPNGITIPHDY-AGRCTGVAYIQFVDKENAEKALLR 203
+V G+++P+D R G ++ F +KE+ E+ L +
Sbjct: 174 VV--GMSLPYDRDNNRLKGYGFVDFGNKEDYERVLKK 208
>gi|49619013|gb|AAT68091.1| KIAA0682-like [Danio rerio]
Length = 927
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 73/184 (39%), Gaps = 34/184 (18%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
+F P+ PV I + GR+SG V+ S + +RAL+ K MG RYIE++
Sbjct: 306 VKEFMMPLKPVAIRFAKNSDGRNSGYVYVDLRSEAEVERALRLDKDYMGGRYIEVFR--- 362
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQ--GAVLSG 137
++ N R R AKRSEM+ R+
Sbjct: 363 -ANNFKNDR----------------------------RSAKRSEMEKNFVRELKDDEEEE 393
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENA 197
+ + ++ +PY C +ED+++ + + + G A++ ++ ENA
Sbjct: 394 DVAESGRLFIRNMPYTCTEEDLKELFSKHGPLSEVLFPIDSLTKKPKGFAFVTYMIPENA 453
Query: 198 EKAL 201
AL
Sbjct: 454 VSAL 457
>gi|395833986|ref|XP_003789998.1| PREDICTED: probable RNA-binding protein 19 [Otolemur garnettii]
Length = 959
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 78/185 (42%), Gaps = 43/185 (23%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+F P+ PV I ++ + G +G V+F+S ++ ++AL+ ++ MG RYIE++ E
Sbjct: 312 EFLAPLKPVAIRIVRNAHGNKTGYIFVDFNSEEEVKKALKCNREYMGGRYIEVFRE---- 367
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA-- 139
KS+P G KR W QG L +
Sbjct: 368 ---------------KSSPMAKGP-------------QKRGTTPW----QGRTLGDNEEE 395
Query: 140 ---VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHD-YAGRCTGVAYIQFVDKE 195
D + ++ LPY +ED+EK + + I P D + G A++ F+ E
Sbjct: 396 EDLADSGRLFVRNLPYTSTEEDLEKLFSKFGPL-SEIHYPIDSLIKKPKGFAFVTFMFPE 454
Query: 196 NAEKA 200
+A KA
Sbjct: 455 HAVKA 459
>gi|402580371|gb|EJW74321.1| hypothetical protein WUBG_14771, partial [Wuchereria bancrofti]
Length = 57
Score = 47.4 bits (111), Expect = 0.009, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 23 FFKPIVPVNILLLTD-DAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF+P+ P +I +L + R SGEA VEF + D A+QR+++ MG RY+EL E
Sbjct: 1 FFQPLRPASIDVLYEYGTDRPSGEAIVEFRNRADFDAAMQRNRNYMGSRYVELIPE 56
>gi|196011702|ref|XP_002115714.1| hypothetical protein TRIADDRAFT_59686 [Trichoplax adhaerens]
gi|190581490|gb|EDV21566.1| hypothetical protein TRIADDRAFT_59686 [Trichoplax adhaerens]
Length = 341
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 39/58 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
+FF P N L+T+ G+ +G A V+F++ +DA +A++ +K + +RYIEL+ +EG
Sbjct: 229 EFFHPTKLENTRLMTNHKGKPNGVAFVDFTNEEDACKAMKSNKDYIRNRYIELFPDEG 286
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 63/131 (48%), Gaps = 7/131 (5%)
Query: 90 TGGFGGV--KSTPYGVGIFCISQFLAKWMRRAKRSEMDWAL---KRQGAVLSGSAVDQCC 144
T F V K + V +F + + R+K S + K + A +
Sbjct: 153 TANFETVMSKRSTDKVCLFLLDAYQTTDNTRSKVSNVSMTQLPNKESDTEDNAPAKNIIT 212
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
++L+GLP++ +E++++F ++ + H G+ GVA++ F ++E+A KA+ +
Sbjct: 213 IKLRGLPFDVNEEEIKEFFHPTKLENTRLMTNH--KGKPNGVAFVDFTNEEDACKAMKSN 270
Query: 205 KEKIGHRLVTL 215
K+ I +R + L
Sbjct: 271 KDYIRNRYIEL 281
>gi|343470599|emb|CCD16749.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 473
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP+ +DV+ F+E ++ V I + D GRC G A+I+ +E +
Sbjct: 111 VLRLRGLPFLSTADDVKAFIESMDGVLR-IDMCRDMDGRCAGDAFIELASEEGVARIKTL 169
Query: 204 HKEKIGHRLVTLVMS 218
HK+ +G R + ++ S
Sbjct: 170 HKKMMGARYIEVLPS 184
>gi|159163850|pdb|2CPY|A Chain A, Solution Structure Of Rna Binding Domain 3 In Rna Binding
Motif Protein 12
Length = 114
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 40/70 (57%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K+
Sbjct: 15 KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSE 74
Query: 202 LRHKEKIGHR 211
H++K+ R
Sbjct: 75 RLHRKKLNGR 84
>gi|156401533|ref|XP_001639345.1| predicted protein [Nematostella vectensis]
gi|156226473|gb|EDO47282.1| predicted protein [Nematostella vectensis]
Length = 75
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 41/71 (57%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
++++GLP+E D++ F +GL + I + + G+ +G+++ F ++A KA+ R
Sbjct: 5 IKMKGLPFEATSRDIQMFFDGLSLREKDIHLAANKDGKASGISFAVFNVDDDARKAMYRT 64
Query: 205 KEKIGHRLVTL 215
+ +G R + L
Sbjct: 65 GKYMGKRYIEL 75
>gi|326674797|ref|XP_003200207.1| PREDICTED: RNA-binding protein 12B-A [Danio rerio]
Length = 685
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 91/217 (41%), Gaps = 27/217 (12%)
Query: 45 EADVEFSSVDDAQRALQRHKSNMGDRYIELYM----------EEGTSSKEANGRGTGGFG 94
EA + F+S +DA+RA+ R + + L++ EE T E R
Sbjct: 42 EAFIIFASDEDARRAMSRSGGCIKGSTVNLFLSSKSEMQSVLEESTRRSEFKNRAMYK-E 100
Query: 95 GVKSTPYGVGIFCISQFLAKWMRRAKRSEM-------DWALKRQGAVLSGSAVDQCCMRL 147
VK G S+ +RRA EM ++ R+ + ++L
Sbjct: 101 PVKRASAEQGPLPFSKDTRPDVRRADHPEMRGRPASSTFSEARRQRDGDAPERAEVYLKL 160
Query: 148 QGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEK 207
G+P+ K++V F GL++ + I + G +G + ++F KE+A + L R ++
Sbjct: 161 TGMPFSATKDNVHNFFAGLKV--DDILFLKNPRGMFSGNSMVRFTTKEDAIEGLKRDRQY 218
Query: 208 IGHRLVTLVM-SGAQWF------LSPPLTNETPISRL 237
+G R + + + +W ++ + TP+ R+
Sbjct: 219 MGSRYIQITRCTEEEWLKEGGLIVAADMRKRTPVERV 255
>gi|60416093|gb|AAH90711.1| Rbm19 protein, partial [Danio rerio]
Length = 802
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 73/182 (40%), Gaps = 34/182 (18%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+F P+ PV I + GR+SG V+ S + +RAL+ K MG RYIE++ +
Sbjct: 308 EFMMPLKPVAIRFAKNSDGRNSGYVYVDLRSEAEVERALRLDKDYMGGRYIEVFR----A 363
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQ--GAVLSGSA 139
+ N R R AKRSEM+ R+
Sbjct: 364 NNFKNDR----------------------------RSAKRSEMEKNFVRELKDDEEEEDV 395
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
+ + ++ +PY C +ED+++ + + + G A++ ++ ENA
Sbjct: 396 AESGRLFIRNMPYTCTEEDLKEVFSKHGPLSEVLFPIDSLTKKPKGFAFVTYMIPENAVS 455
Query: 200 AL 201
AL
Sbjct: 456 AL 457
>gi|297683295|ref|XP_002819319.1| PREDICTED: RNA-binding protein 12B isoform 2 [Pongo abelii]
gi|297683297|ref|XP_002819320.1| PREDICTED: RNA-binding protein 12B isoform 3 [Pongo abelii]
gi|395739892|ref|XP_003777333.1| PREDICTED: RNA-binding protein 12B [Pongo abelii]
gi|395739895|ref|XP_003777334.1| PREDICTED: RNA-binding protein 12B [Pongo abelii]
Length = 1001
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 34/203 (16%)
Query: 44 GEADVEFSSVDDAQRALQRHKSNMGDRYIELY------MEEGTSSKEAN--GRGTGGFGG 95
GEA + F++ +DA+RA+ R + D +EL+ M++ K + GRG G G
Sbjct: 41 GEAFIIFATDEDARRAISRSGGFIKDSSVELFLSSKAEMQKTIEMKRTDRVGRGRPGSGT 100
Query: 96 VKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA--------------VD 141
GVG +S + A S ++ + S +
Sbjct: 101 S-----GVG--SLSNIIESVKEEASNSGYGSSINQDAGFHSNGTGHGNLRPRKTRPLKAE 153
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ L+GLPY ++DV F GL + +G+ + GR G A ++F +A L
Sbjct: 154 NPYLFLRGLPYLVNEDDVRVFFSGLCV--DGVIFLKHHDGRNNGDAIVKFASCVDASGGL 211
Query: 202 LRHKEKIGHRLVTLVMSGA--QW 222
H+ +G R + VM G+ QW
Sbjct: 212 KCHRSFMGSRFIE-VMQGSEQQW 233
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 131 QGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
Q G++ + C+ ++ P++ K +V+KF + + I + +D G G A ++
Sbjct: 388 QKYSQEGNSGQKLCIYIRNFPFDVTKVEVQKFFADFLLAEDDIYLLYDDKGVGLGEALVK 447
Query: 191 FVDKENAEKA-LLRHKEKIGHRLVTLVMSGAQ 221
F +E A KA L + +G ++ ++S AQ
Sbjct: 448 FKSEEQAMKAERLNRRRFLGTEVLLRLISEAQ 479
>gi|444727895|gb|ELW68371.1| Heterogeneous nuclear ribonucleoprotein H2 [Tupaia chinensis]
Length = 236
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF + P+ + + GR +GEADVEF + +DA A+ + K NM RY+EL++ G
Sbjct: 106 NFFLLLNPMRVHIEIGPDGRVTGEADVEFDTHEDAVAAMAKDKVNMQHRYVELFLNSTAG 165
Query: 80 TS 81
TS
Sbjct: 166 TS 167
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L + P + I GR TG A ++F E+A A+ +
Sbjct: 89 CVHMRGLPYRATENDIYNFF--LLLNPMRVHIEIGPDGRVTGEADVEFDTHEDAVAAMAK 146
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 147 DKVNMQHRYVELFLN 161
>gi|189235137|ref|XP_001807432.1| PREDICTED: similar to RBD protein [Tribolium castaneum]
gi|270003801|gb|EFA00249.1| hypothetical protein TcasGA2_TC003078 [Tribolium castaneum]
Length = 840
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%), Gaps = 7/80 (8%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D ++L+GLPY +K+D+++FL+ + P I +P + G+AY+ F +++ +KA
Sbjct: 222 DLFTLKLRGLPYNSRKKDIKQFLKP--VTPFSIRLP----AKIHGIAYVGFKTEKDYKKA 275
Query: 201 LLRHKEKI-GHRLVTLVMSG 219
LL+ + I G R+ + SG
Sbjct: 276 LLKDRSFIAGKRISVMEYSG 295
>gi|440632913|gb|ELR02832.1| hypothetical protein GMDG_05768 [Geomyces destructans 20631-21]
Length = 984
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 99/266 (37%), Gaps = 51/266 (19%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
Q+FK +N L L ++ + S A +EF SV+D Q AL R D+ I + G +
Sbjct: 584 QYFKEYGHINNLTLKPESDKQSATALIEFRSVEDVQSALLRDDKYFADKQISVVPGTGLT 643
Query: 82 SKEANGRGTGGFGGVKSTPYGVGI----------------FCISQFL------------- 112
N T +++ G FC F
Sbjct: 644 LYVTNYPPTADEDYLRNLFKDCGEIFSFRWPSLKYNTHRRFCYVSFRTAAAAAAATALDG 703
Query: 113 ----AKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEI 168
K+ AK S+ R+GA+L G + + GL ++D++
Sbjct: 704 KLLEGKYKLEAKYSDPSRKKPREGAMLEGREI-----HIAGLDRGASEDDLQAVFSKYGA 758
Query: 169 VPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGAQWFL---- 224
V + I + AG+ G A++ F E A KAL K K +++T+ ++ F
Sbjct: 759 V-ESVRILRNIAGKSKGSAFVVFAKAEEATKALELDKTKFWSQVLTVELATPTNFKATAT 817
Query: 225 -------SPPLTNETPISRLDLTGSP 243
SP +N+ SR+ GSP
Sbjct: 818 TSTSAAGSPAPSNDLD-SRMSGAGSP 842
>gi|24646109|ref|NP_731640.1| glorund, isoform C [Drosophila melanogaster]
gi|23171055|gb|AAN13533.1| glorund, isoform C [Drosophila melanogaster]
Length = 179
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEA----NGRGTGGFGG 95
G+++GEA VE +S +D + A + +K++MG RYIE++ +KEA +G GT
Sbjct: 90 GKNTGEAYVEVASQEDVEEARKLNKASMGHRYIEVFTATPKEAKEAMRKISGHGTAFVVK 149
Query: 96 VKSTPYGVGIFCISQFLAKWMR 117
++ PY V I +F + +R
Sbjct: 150 LRGLPYAVTEQQIEEFFSGILR 171
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 12/120 (10%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPH----DYAGRCTGVAYIQFVDKENAEKA 200
+RL+GLP+ +++ FLE + V NG H G+ TG AY++ +E+ E+A
Sbjct: 51 VRLRGLPWSATHKEILDFLENVN-VTNGSAGIHLVTSRVDGKNTGEAYVEVASQEDVEEA 109
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVRSTICVLCHPLTPRSV 260
+K +GHR + + F + P + + ++ G+ + L + +T + +
Sbjct: 110 RKLNKASMGHRYIEV-------FTATPKEAKEAMRKISGHGTAFVVKLRGLPYAVTEQQI 162
>gi|237839439|ref|XP_002369017.1| RRM domain-containing protein [Toxoplasma gondii ME49]
gi|211966681|gb|EEB01877.1| RRM domain-containing protein [Toxoplasma gondii ME49]
Length = 513
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 8/82 (9%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLE---IVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+RL+GLPY ++ + +F G I+P+ TIP D GR +G AY+QFVD A +A
Sbjct: 415 VLRLRGLPYSANEQHIVQFFHGFHMAAILPS--TIPID--GRPSGEAYVQFVDAAEALRA 470
Query: 201 L-LRHKEKIGHRLVTLVMSGAQ 221
++ ++ R++ L S Q
Sbjct: 471 FQAKNGGRMDKRMIELFPSSKQ 492
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 91/201 (45%), Gaps = 39/201 (19%)
Query: 23 FFKPIVPV---NILLLTDDAGRSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELYMEE 78
FFKP+V + N+L+ R++GEA V+ ++A++ H +G R+IE++
Sbjct: 71 FFKPVVALENDNVLICIGFDKRTTGEAYVQLPDPGLREQAIKDLHGRLLGTRWIEVFRAS 130
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
++A+ R +++ M ++ +
Sbjct: 131 EEEFQKADDR-------------------------------RKTVMAAISGNTDSLDASR 159
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLE---GLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
++ ++L+GLP+ C + ++ +F + G +I + + + GR +G+A+++ +
Sbjct: 160 RMNLNVVKLRGLPWSCSENEIVRFFKAEGGFDIHSDDVVLGVTGDGRLSGIAFVELPSPD 219
Query: 196 NAEKAL-LRHKEKIGHRLVTL 215
AEKA + HK+ +G R + +
Sbjct: 220 VAEKAREVLHKKYMGRRFIEV 240
>gi|221483341|gb|EEE21660.1| RNA recognition motif-containing protein, putative [Toxoplasma
gondii GT1]
Length = 508
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 8/82 (9%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLE---IVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+RL+GLPY ++ + +F G I+P+ TIP D GR +G AY+QFVD A +A
Sbjct: 410 VLRLRGLPYSANEQHIVQFFHGFHMAAILPS--TIPID--GRPSGEAYVQFVDAAEALRA 465
Query: 201 L-LRHKEKIGHRLVTLVMSGAQ 221
++ ++ R++ L S Q
Sbjct: 466 FQAKNGGRMDKRMIELFPSSKQ 487
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 91/201 (45%), Gaps = 39/201 (19%)
Query: 23 FFKPIVPV---NILLLTDDAGRSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELYMEE 78
FFKP+V + N+L+ R++GEA V+ ++A++ H +G R+IE++
Sbjct: 71 FFKPVVALENDNVLICIGFDKRTTGEAYVQLPDPGLREQAIKDLHGRLLGTRWIEVFRAS 130
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
++A+ R +++ M ++ +
Sbjct: 131 EEEFQKADDR-------------------------------RKTVMAAISGNTDSLDASR 159
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLE---GLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
++ ++L+GLP+ C + ++ +F + G +I + + + GR +G+A+++ +
Sbjct: 160 RMNLNVVKLRGLPWSCSENEIVRFFKAEGGFDIHSDDVVLGVTGDGRLSGIAFVELPSPD 219
Query: 196 NAEKAL-LRHKEKIGHRLVTL 215
AEKA + HK+ +G R + +
Sbjct: 220 VAEKAREVLHKKYMGRRFIEV 240
>gi|190337757|gb|AAI63877.1| RNA binding motif protein 19 [Danio rerio]
Length = 926
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 73/182 (40%), Gaps = 34/182 (18%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+F P+ PV I + GR+SG V+ S + +RAL+ K MG RYIE++ +
Sbjct: 307 EFMMPLKPVAIRFAKNSDGRNSGYVYVDLRSEAEVERALRLDKDYMGGRYIEVFR----A 362
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQ--GAVLSGSA 139
+ N R R AKRSEM+ R+
Sbjct: 363 NNFKNDR----------------------------RSAKRSEMEKNFVRELKDDEEEEDV 394
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
+ + ++ +PY C +ED+++ + + + G A++ ++ ENA
Sbjct: 395 AESGRLFIRNMPYTCTEEDLKEVFSKHGPLSEVLFPIDSLTKKPKGFAFVTYMIPENAVS 454
Query: 200 AL 201
AL
Sbjct: 455 AL 456
>gi|428180581|gb|EKX49448.1| hypothetical protein GUITHDRAFT_104977 [Guillardia theta CCMP2712]
Length = 443
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
++L+GLPY DV F +GL ++ IT + GR +G A++ F E+A KA +R
Sbjct: 357 VKLRGLPYGATTADVLNFFKGLGVLEESITFGINSEGRPSGEAWVSFNRIEDARKA-VRE 415
Query: 205 KEK--IGHRLVTLVM 217
K++ +G R V L +
Sbjct: 416 KDRHHMGDRYVELFL 430
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRAL-QRHKSNMGDRYIELYM 76
FFK ++ +I + GR SGEA V F+ ++DA++A+ ++ + +MGDRY+EL++
Sbjct: 374 FFKGLGVLEESITFGINSEGRPSGEAWVSFNRIEDARKAVREKDRHHMGDRYVELFL 430
>gi|350425556|ref|XP_003494159.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Bombus impatiens]
Length = 914
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 73/148 (49%), Gaps = 12/148 (8%)
Query: 130 RQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYI 189
R+ ++++ + ++GLP KED+E+ + + + I G G+AY+
Sbjct: 756 RESVFKYSCSLEKNKLFVKGLPVSTTKEDLEEIFK-VHGSLKEVRIVTYRNGHSKGLAYV 814
Query: 190 QFVDKENAEKALLR-HKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVRSTI 248
+FVD+ +A KALL KIG +++++ +S PP + PI L GS V T
Sbjct: 815 EFVDENSAGKALLAIDGMKIGDKIISVAIS------QPPERKKDPIK--SLGGSTVSRT- 865
Query: 249 CVLCHPLTPRSVRPRSVRQSEHEWWALA 276
P T S+ PR+V+ + + A+A
Sbjct: 866 -TFGTPKTLLSMVPRTVKTAATKGSAIA 892
>gi|344295376|ref|XP_003419388.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-binding protein
19-like [Loxodonta africana]
Length = 1089
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 39/185 (21%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
++F P+ PV I ++ + G +G V+FSS ++ ++AL+ ++ MG RYIE++ E
Sbjct: 310 VTEFLAPLKPVAIRIVRNSHGNKTGYIFVDFSSEEEVKKALKCNREYMGGRYIEVFRE-- 367
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRA---KRSEMDWALKRQGAVLS 136
KS+P G + W R E D A
Sbjct: 368 -----------------KSSPTAKG--PLKHGAKPWQGRTLGENEEEEDLA--------- 399
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHD-YAGRCTGVAYIQFVDKE 195
D + ++ LPY +E++EK + + + P D + G A+I F+ E
Sbjct: 400 ----DSGRLFVRNLPYTSTEEELEKLFSKYGPL-SELHYPIDSLTKKPKGFAFITFMFPE 454
Query: 196 NAEKA 200
+A KA
Sbjct: 455 HAVKA 459
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
++L+G P+ +++V +FL L+ P I I + G TG ++ F +E +KAL
Sbjct: 295 TVKLRGAPFNVTEKNVTEFLAPLK--PVAIRIVRNSHGNKTGYIFVDFSSEEEVKKALKC 352
Query: 204 HKEKIGHRLVTL 215
++E +G R + +
Sbjct: 353 NREYMGGRYIEV 364
>gi|281343470|gb|EFB19054.1| hypothetical protein PANDA_014807 [Ailuropoda melanoleuca]
Length = 947
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 40/63 (63%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
++F P+ PV I ++ + G +G V+FSS ++ ++AL+ H+ MG RYIE++ E+
Sbjct: 300 VTEFLAPLRPVAIRIVRNAHGNKTGYIFVDFSSEEEVKQALKCHREYMGGRYIEVFREKN 359
Query: 80 TSS 82
++
Sbjct: 360 VTT 362
>gi|159486121|ref|XP_001701092.1| heterogeneous nuclear ribonucleoprotein [Chlamydomonas reinhardtii]
gi|158271986|gb|EDO97794.1| heterogeneous nuclear ribonucleoprotein [Chlamydomonas reinhardtii]
Length = 295
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+RL+GLP++ + D++ FLE LE V + + + D GR +G A++ + + E A+ +
Sbjct: 29 CVRLRGLPFDVMEGDIKMFLE-LEPV-DIVMVKRD--GRFSGEAFVVVGNLQQVEAAMTK 84
Query: 204 HKEKIGHRLVTL 215
H++ IG R + +
Sbjct: 85 HRQFIGQRFIEI 96
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
+ F + PV+I+++ D GR SGEA V ++ + A+ +H+ +G R+IE++
Sbjct: 45 KMFLELEPVDIVMVKRD-GRFSGEAFVVVGNLQQVEAAMTKHRQFIGQRFIEIF 97
>gi|354491414|ref|XP_003507850.1| PREDICTED: RNA-binding protein 12B-A-like [Cricetulus griseus]
Length = 850
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 84/199 (42%), Gaps = 19/199 (9%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM-EEGTSSKEANGRGTGGFGGVKS 98
G GEA + F++ +DA+RA+ R + D +EL++ + K + T G +
Sbjct: 47 GGKVGEAFIIFATDEDARRAISRSGGFIKDSSVELFLSSKAEMQKTIEMKRTARGGRGRL 106
Query: 99 TPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQ-GAVLSGSAVD------------QCCM 145
G + F+ S ++ + G +G+ +D +
Sbjct: 107 GSGASGASSLYHFIDAMKEEESYSGYGSSINQDAGFHTNGTGLDIRPRKTRPLKAENPYL 166
Query: 146 RLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHK 205
L+GLPY ++DV F GL + +G+ + GR G A ++F +A L H+
Sbjct: 167 FLRGLPYLVNEDDVRVFFSGLCV--DGVIFLKHHDGRNNGDAVVKFASCIDASGGLKCHR 224
Query: 206 EKIGHRLVTLVMSGA--QW 222
+G R + VM G+ QW
Sbjct: 225 SFMGSRFIE-VMQGSEQQW 242
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIEL 74
FF + ++ L GR++G+A V+F+S DA L+ H+S MG R+IE+
Sbjct: 183 FFSGLCVDGVIFLKHHDGRNNGDAVVKFASCIDASGGLKCHRSFMGSRFIEV 234
>gi|301779826|ref|XP_002925333.1| PREDICTED: probable RNA-binding protein 19-like [Ailuropoda
melanoleuca]
Length = 963
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 40/63 (63%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
++F P+ PV I ++ + G +G V+FSS ++ ++AL+ H+ MG RYIE++ E+
Sbjct: 312 VTEFLAPLRPVAIRIVRNAHGNKTGYIFVDFSSEEEVKQALKCHREYMGGRYIEVFREKN 371
Query: 80 TSS 82
++
Sbjct: 372 VTT 374
>gi|226487874|emb|CAX75602.1| Heterogeneous nuclear ribonucleoprotein H' [Schistosoma japonicum]
Length = 150
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 15/92 (16%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIV---------------PNGITIPHDYAGRCTGVAYI 189
+R++GLP+ +D+ F +G + GI P GR G A+I
Sbjct: 5 VRIRGLPFSANADDIINFFKGTLVFRVFFNVFTDCTIRGGKRGIYFPQGPNGRSNGEAFI 64
Query: 190 QFVDKENAEKALLRHKEKIGHRLVTLVMSGAQ 221
+ K++ EKA+ H E +G R + + S ++
Sbjct: 65 ELDSKDDKEKAMAHHNEHMGRRYIEVFDSCSE 96
Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGF 93
GRS+GEA +E S DD ++A+ H +MG RYIE++ + S + N G+ F
Sbjct: 56 GRSNGEAFIELDSKDDKEKAMAHHNEHMGRRYIEVF--DSCSEELNNAMGSRPF 107
>gi|340728933|ref|XP_003402766.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Bombus terrestris]
Length = 914
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 130 RQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYI 189
R+ ++++ + ++GLP KED+E+ + + + I G G+AY+
Sbjct: 756 RESVFKYSCSLEKNKLFVKGLPVTTTKEDLEEIFK-VHGSLKEVRIVTYRNGHSKGLAYV 814
Query: 190 QFVDKENAEKALLR-HKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVRSTI 248
+FVD+ +A KALL KIG +++++ +S PP + PI L GS V T
Sbjct: 815 EFVDENSAGKALLAIDGMKIGDKIISVAIS------QPPERKKDPIK--SLGGSTVSRT- 865
Query: 249 CVLCHPLTPRSVRPRSVR 266
P T S+ PR+V+
Sbjct: 866 -TFGTPKTLLSMVPRTVK 882
>gi|432094975|gb|ELK26383.1| Putative RNA-binding protein 19 [Myotis davidii]
Length = 966
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 77/183 (42%), Gaps = 35/183 (19%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
++F P+ PV I ++ + G +G V+FSS ++ ++AL+ ++ MG RYIE++ E
Sbjct: 316 VTEFLAPLKPVAIRIVRNAHGNKTGYVFVDFSSEEEVKKALKCNREYMGGRYIEVFRE-- 373
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA 139
K+ P G K S W + G
Sbjct: 374 -----------------KTVPVAKGP-------------PKSSSKPWQGRTLGEDEEEED 403
Query: 140 V-DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHD-YAGRCTGVAYIQFVDKENA 197
+ D + ++ LPY +ED+EK + + + P D + G A++ F+ E+A
Sbjct: 404 LADSGRLFVRNLPYTSTEEDLEKIFSKYGPL-SELHYPIDSLTKKPKGFAFVSFMFPEHA 462
Query: 198 EKA 200
KA
Sbjct: 463 VKA 465
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
++L+G P+ +++V +FL L+ P I I + G TG ++ F +E +KAL
Sbjct: 301 TVKLRGAPFNVTEKNVTEFLAPLK--PVAIRIVRNAHGNKTGYVFVDFSSEEEVKKALKC 358
Query: 204 HKEKIGHRLVTL 215
++E +G R + +
Sbjct: 359 NREYMGGRYIEV 370
>gi|388499278|gb|AFK37705.1| unknown [Medicago truncatula]
Length = 94
Score = 46.2 bits (108), Expect = 0.020, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 40/71 (56%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
++++GLP+ K + F + +++ + I G+ TG AY++FV + A++A+ +
Sbjct: 7 LKMRGLPFLVTKSQIIDFFKDYKLIEGRVHIACRPDGKVTGEAYVEFVSPDEAKRAMFKD 66
Query: 205 KEKIGHRLVTL 215
K IG R V L
Sbjct: 67 KMTIGSRYVEL 77
Score = 42.7 bits (99), Expect = 0.19, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGR 88
G+ +GEA VEF S D+A+RA+ + K +G RY+EL+ ++ A R
Sbjct: 43 GKVTGEAYVEFVSPDEAKRAMFKDKMTIGSRYVELFPFTPDEARRAESR 91
>gi|76155549|gb|AAX26841.2| SJCHGC06966 protein [Schistosoma japonicum]
Length = 106
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 15/85 (17%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIV---------------PNGITIPHDYAGRCTGVAY 188
+R++GLP+ +D+ F +G + GI P GR G A+
Sbjct: 9 VVRIRGLPFSANADDIINFFKGTLVFRVFFNVSTDCTIRGGKRGIYFPQGPNGRSNGEAF 68
Query: 189 IQFVDKENAEKALLRHKEKIGHRLV 213
I+ K++ EKA+ H E +G R +
Sbjct: 69 IELDSKDDKEKAMAHHNEHMGRRYI 93
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIE 73
GRS+GEA +E S DD ++A+ H +MG RYIE
Sbjct: 61 GRSNGEAFIELDSKDDKEKAMAHHNEHMGRRYIE 94
>gi|440906243|gb|ELR56528.1| RNA-binding protein 12B [Bos grunniens mutus]
Length = 977
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 79/195 (40%), Gaps = 18/195 (9%)
Query: 44 GEADVEFSSVDDAQRALQRHKSNMGDRYIELYME-EGTSSKEANGRGTGGFGGVKSTPYG 102
GEA + F++ +DA+RA+ R + D +EL++ + K + T G +
Sbjct: 41 GEAFIIFATDEDARRAVSRSGGFIKDSSVELFLSSKAEMQKTIEMKRTDRMGRERPGSGA 100
Query: 103 VGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA--------------VDQCCMRLQ 148
G+ +S F+ S + + + + + L+
Sbjct: 101 SGVGSLSNFVEAIKEEGSNSGYGSPINQDAGFHTNGTGHGDLRPRKTRPLTAENPYLFLR 160
Query: 149 GLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKI 208
GLPY ++DV F GL + +G+ + GR G A ++F +A L H+ +
Sbjct: 161 GLPYLVNEDDVRVFFSGLCV--DGVIFLKHHDGRNNGDAIVKFASCIDASGGLKCHRSFM 218
Query: 209 GHRLVTLVM-SGAQW 222
G R + ++ S QW
Sbjct: 219 GSRFIEVMQGSEKQW 233
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 131 QGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
Q G + + C+ ++ P++ K +V+KF + + I + +D G G A ++
Sbjct: 388 QKHSQEGYSGQKLCIYIRNFPFDVTKVEVQKFFADFSLAEDDICLLYDDKGVGLGEALVK 447
Query: 191 FVDKENAEKA-LLRHKEKIGHRLVTLVMSGAQ 221
F +E A KA L + +G ++ ++S AQ
Sbjct: 448 FTSEEQAVKAERLNRRRFLGTEVLLRLISEAQ 479
>gi|126322103|ref|XP_001368765.1| PREDICTED: RNA-binding protein 12B-like [Monodelphis domestica]
Length = 745
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 82/195 (42%), Gaps = 11/195 (5%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF + I+LL GR++G+ V+F++ DA LQRH+ MG R++E+ + +
Sbjct: 186 FFPGLCVDGIILLKHPTGRNNGDCLVKFATSHDALGGLQRHRHYMGSRFVEV-----SPA 240
Query: 83 KEANGRGTGGFGGVKSTPYGVGIFCISQ--FLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
E GG +K + Q ++ RS+ +KR+
Sbjct: 241 SEQQWIDCGGSADIKDEVHFRSEERSPQRGINDAHSKKRSRSKSPRRMKRRSRSPHKYGF 300
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ L+ L +K D++ F ++ + I + R TG A++ F + A
Sbjct: 301 ---YVHLKNLSLSVEKRDIKNFFRDTDLASDQIKFLYKDQKR-TGSAFVMFKTLRDYNSA 356
Query: 201 LLRHKEKIGHRLVTL 215
L HK + HR V +
Sbjct: 357 LALHKFILFHRQVLI 371
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D + L+GLPY +++V F GL + +GI + GR G ++F +A
Sbjct: 165 DNRYLFLRGLPYSATEDEVRAFFPGLCV--DGIILLKHPTGRNNGDCLVKFATSHDALGG 222
Query: 201 LLRHKEKIGHRLVTLV-MSGAQW 222
L RH+ +G R V + S QW
Sbjct: 223 LQRHRHYMGSRFVEVSPASEQQW 245
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
G + + C+ ++ P++ K +V+KF G I + + + +D G G A ++F +E
Sbjct: 410 GHSGPKLCIYIRNFPFDVTKVEVQKFFAGFSIDEDDVYLLYDDKGVGLGEALVKFKSEEQ 469
Query: 197 AEKA-LLRHKEKIGHRLVTLVMSGAQW 222
A KA L + +G ++ ++S Q
Sbjct: 470 AMKAESLNRRRFLGTEVLLRLISEEQM 496
>gi|312091561|ref|XP_003147025.1| hypothetical protein LOAG_11458 [Loa loa]
Length = 88
Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 35/51 (68%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYI 72
+FF+P+ V I L ++ R SG+A V FS++ +A+ AL R+K+NMG R I
Sbjct: 17 EFFRPLNCVEIKLGYNEERRLSGDALVSFSTMAEAREALSRNKNNMGTRTI 67
Score = 38.5 bits (88), Expect = 3.8, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
M GLPY D+E+F L V I + ++ R +G A + F A +AL R+
Sbjct: 1 MHFSGLPYSVTTLDIEEFFRPLNCVE--IKLGYNEERRLSGDALVSFSTMAEAREALSRN 58
Query: 205 KEKIGHRLV 213
K +G R +
Sbjct: 59 KNNMGTRTI 67
>gi|194673041|ref|XP_881008.3| PREDICTED: RNA-binding protein 12B isoform 4 [Bos taurus]
gi|297482529|ref|XP_002692866.1| PREDICTED: RNA-binding protein 12B [Bos taurus]
gi|296480442|tpg|DAA22557.1| TPA: RNA binding motif protein 12-like [Bos taurus]
Length = 984
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 79/195 (40%), Gaps = 18/195 (9%)
Query: 44 GEADVEFSSVDDAQRALQRHKSNMGDRYIELYME-EGTSSKEANGRGTGGFGGVKSTPYG 102
GEA + F++ +DA+RA+ R + D +EL++ + K + T G +
Sbjct: 41 GEAFIIFATDEDARRAVSRSGGFIKDSSVELFLSSKAEMQKTIEMKRTDRMGRERPGSGA 100
Query: 103 VGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA--------------VDQCCMRLQ 148
G+ +S F+ S + + + + + L+
Sbjct: 101 SGVGSLSNFVEAIKEEGSNSGYGSPINQDAGFHTNGTGHGDLRPRKTRPLTAENPYLFLR 160
Query: 149 GLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKI 208
GLPY ++DV F GL + +G+ + GR G A ++F +A L H+ +
Sbjct: 161 GLPYLVNEDDVRVFFSGLCV--DGVIFLKHHDGRNNGDAIVKFASCIDASGGLKCHRSFM 218
Query: 209 GHRLVTLVM-SGAQW 222
G R + ++ S QW
Sbjct: 219 GSRFIEVMQGSEKQW 233
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 131 QGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
Q G + + C+ ++ P++ K +V+KF + + I + +D G G A ++
Sbjct: 388 QKHSQEGYSGQKLCIYIRNFPFDVTKVEVQKFFADFSLAEDDICLLYDDKGVGLGEALVK 447
Query: 191 FVDKENAEKA-LLRHKEKIGHRLVTLVMSGAQ 221
F +E A KA L + +G ++ ++S AQ
Sbjct: 448 FKSEEQAVKAERLNRRRFLGTEVLLRLISEAQ 479
>gi|15219528|ref|NP_175125.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332193959|gb|AEE32080.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 497
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 82/197 (41%), Gaps = 31/197 (15%)
Query: 22 QFFKPIVPV-NILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK + V ++ L+ + G+ +G VEF+S ++A++AL ++ + + I L
Sbjct: 265 NFFKDVGEVVHVRLIVNSQGKHAGWGFVEFASANEAEKALVKNGEYLHNYKISL------ 318
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQ--FLAKWMRRA----KRSEMDWALKRQGAV 134
G K+ P+ FC+ + ++RR K E L
Sbjct: 319 -------------DGAKTAPHRPPKFCLDHKVWYEDYLRRESLLIKEVEGVEGLDETPDF 365
Query: 135 LSGSAVDQCCMRLQGLPYECK---KEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQF 191
L A + + + LPY C+ + F + EIV I I D+ G G +++F
Sbjct: 366 LEEVAARKNTVFVANLPYNCRLIVPTIINFFSDVGEIV--HIRIIVDHMGEPVGCGFVEF 423
Query: 192 VDKENAEKALLRHKEKI 208
AEKAL + KI
Sbjct: 424 NSSNEAEKALQKKTGKI 440
>gi|426235843|ref|XP_004023424.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 12B-like [Ovis
aries]
Length = 983
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 79/195 (40%), Gaps = 18/195 (9%)
Query: 44 GEADVEFSSVDDAQRALQRHKSNMGDRYIELYME-EGTSSKEANGRGTGGFGGVKSTPYG 102
GEA + F++ +DA+RA+ R + D +EL++ + K + T G +
Sbjct: 41 GEAFIIFATDEDARRAVSRSGGFIKDSSVELFLSSKAEMQKTIEMKRTDRMGRERPGSGA 100
Query: 103 VGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA--------------VDQCCMRLQ 148
G+ +S F+ S + + + + + L+
Sbjct: 101 SGVGSLSNFVEAIKEEGSNSGYGSPINQDAGFHTNGTGHGDLRPRKTRPLTAENPYLFLR 160
Query: 149 GLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKI 208
GLPY ++DV F GL + +G+ + GR G A ++F +A L H+ +
Sbjct: 161 GLPYLVNEDDVRVFFSGLCV--DGVIFLKHHDGRNNGDAIVKFASCIDASGGLKCHRSFM 218
Query: 209 GHRLVTLVM-SGAQW 222
G R + ++ S QW
Sbjct: 219 GSRFIEVMQGSEKQW 233
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 131 QGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
Q G + + C+ ++ P++ K +V+KF + + I + +D G G A ++
Sbjct: 388 QKHSQEGYSGQKLCIYIRNFPFDVTKVEVQKFFADFSLAEDDICLLYDDKGVGLGEALVK 447
Query: 191 FVDKENAEKA-LLRHKEKIGHRLVTLVMSGAQ 221
F +E A KA L + +G ++ ++S AQ
Sbjct: 448 FKSEEQAVKAERLNRRRFLGTEVLLRLISEAQ 479
>gi|344273251|ref|XP_003408437.1| PREDICTED: RNA-binding protein 12B-like [Loxodonta africana]
Length = 971
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 82/195 (42%), Gaps = 12/195 (6%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM-EEGTSSKEANGRGTGGFGGVKS 98
G GEA + F++ +DA+RA+ R + D Y+EL++ + K + T G +
Sbjct: 37 GGEVGEAFIIFATDEDARRAISRSGGLIKDSYVELFLSSKAEMQKTIEMKRTDRTGRERP 96
Query: 99 TPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG---------SAVDQCCMRLQG 149
G G +S F A SE A G + + L+G
Sbjct: 97 ESGGSGAGSLSNFAGAVKEEASNSEYQDAEFHTNGTGRGDLKPRSTRPARAKNPYLFLRG 156
Query: 150 LPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIG 209
LPY ++DV F GL + +G+ + GR G A ++F +A L H+ +G
Sbjct: 157 LPYLVNEDDVRVFFAGLCV--DGVIFLKLHDGRNNGDAIVKFASCIDASGGLKCHRSFMG 214
Query: 210 HRLVTLVMSGAQWFL 224
R + ++ S Q ++
Sbjct: 215 SRFIEVMQSSEQQWI 229
>gi|226482640|emb|CAX73919.1| RNA-binding protein 12 [Schistosoma japonicum]
Length = 922
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 6/104 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQ LP ++ +F GL I G+ I G G A+I F E+A KA+L
Sbjct: 3 VIIRLQNLPISANAANIRRFFSGLSIPEGGVHI----VGGTEGDAFIAFATDEDARKAML 58
Query: 203 RHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVRS 246
++ I V L +S S + S L +G+PV S
Sbjct: 59 LDRQTINGASVRLFLSSKAEMQS--IIESAKTSALFSSGNPVLS 100
>gi|297802818|ref|XP_002869293.1| F27F5.17 [Arabidopsis lyrata subsp. lyrata]
gi|297315129|gb|EFH45552.1| F27F5.17 [Arabidopsis lyrata subsp. lyrata]
Length = 523
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 31/192 (16%)
Query: 22 QFFKPIVPV-NILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK + V ++ L+ + G+ +G VEF+S ++A++AL ++ + + I L +
Sbjct: 282 NFFKDVGEVVHVRLVVNSQGKHAGWGFVEFASANEAEKALVKNGEYLHNYKISLDV---- 337
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQ--FLAKWMRRA----KRSEMDWALKRQGAV 134
K+ PY FC+ + ++RR K E L
Sbjct: 338 ---------------AKTAPYRPPKFCLDHKVWYEDYLRRESLLIKEDEAVEGLDETPDF 382
Query: 135 LSGSAVDQCCMRLQGLPYECKK---EDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQF 191
L +A + + + LPY C++ + F + EIV I + D+ G G +++F
Sbjct: 383 LEEAAARKKTLFVANLPYSCRRIVPTIINFFKDVGEIVHVRIIV--DHMGVPVGCGFVEF 440
Query: 192 VDKENAEKALLR 203
AEKAL +
Sbjct: 441 NSSNEAEKALQK 452
>gi|28279187|gb|AAH45946.1| Zgc:56148 [Danio rerio]
Length = 314
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 92/217 (42%), Gaps = 27/217 (12%)
Query: 45 EADVEFSSVDDAQRALQRHKSNMGDRYIELYM----------EEGTSSKEANGRGTGGFG 94
EA + F+S +DA+RA+ R + + L++ EE T E R
Sbjct: 42 EAFIIFASDEDARRAMSRSGGCIKGSTVNLFLSSKSEMQSVLEESTRRSELKNRAMYKEP 101
Query: 95 GVKSTPYGVGIFCISQFLAKWMRRAKRSEM-------DWALKRQGAVLSGSAVDQCCMRL 147
+++ G S+ +RRA EM ++ R+ + ++L
Sbjct: 102 AKRASAEQ-GPLPFSKDTRPDVRRADHPEMRGRPASSTFSEARRQRDGDAPERAEVYLKL 160
Query: 148 QGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEK 207
G+P+ K++V F GL++ + I + G +G + ++F KE+A + L R ++
Sbjct: 161 TGMPFSATKDNVHNFFAGLKV--DDILFLKNPRGMFSGNSMVRFTTKEDAIEGLKRDRQY 218
Query: 208 IGHRLVTLVM-SGAQWF------LSPPLTNETPISRL 237
+G R + + + +W ++ + TP+ R+
Sbjct: 219 MGSRYIQITRCTEEEWLKEGGLIVAADMRKRTPVERV 255
Score = 37.4 bits (85), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIEL 74
FF + +IL L + G SG + V F++ +DA L+R + MG RYI++
Sbjct: 174 NFFAGLKVDDILFLKNPRGMFSGNSMVRFTTKEDAIEGLKRDRQYMGSRYIQI 226
>gi|148231978|ref|NP_001083138.1| RNA binding motif protein 12B [Xenopus laevis]
gi|37805207|gb|AAH60345.1| MGC68792 protein [Xenopus laevis]
Length = 654
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
Query: 149 GLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKI 208
GLPY + DV+ F G +V ++ + G G AY++F ++A+ +L R E I
Sbjct: 163 GLPYSTSELDVKDFFHGFHVVDVHFSVRSN--GARDGNAYVKFASVQDAKASLSRDYEYI 220
Query: 209 GHRLVTLVMSGA-QWFLSPPLTNETPISRLDLTGSPVRSTICVLCHPLTPRSVRPRSVRQ 267
GHR + + +S +W + T+E S R + +P++ R RS
Sbjct: 221 GHRRIAVKLSTEHKWIEAGGPTDEMQESAHKTRERSSRFSSKNHSSSRSPKTHRTRSRSP 280
Query: 268 SEHEWW 273
+++
Sbjct: 281 HNQQFY 286
>gi|348588498|ref|XP_003480003.1| PREDICTED: RNA-binding protein 12B-like [Cavia porcellus]
Length = 850
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 34/203 (16%)
Query: 44 GEADVEFSSVDDAQRALQRHKSNMGDRYIELY------MEEGTSSKEAN--GRGTGGFGG 95
GEA + F++ +DA+RA+ R + D +EL+ M++ K + RG G G
Sbjct: 41 GEAFIIFATDEDARRAICRSGGFIKDSSVELFLSSKAEMQKTIEMKRTDRIERGRPGSGA 100
Query: 96 VKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQ-GAVLSGSAVDQCCMR-------- 146
G+ +S ++ S ++ + G +G+ +D R
Sbjct: 101 S-------GVGNLSNYIEAMKEDENNSGYGSSINQDAGFHTNGTGLDDLRPRKTRPSKAE 153
Query: 147 -----LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
L+GLPY ++DV F GL + +G+ + GR G A ++F +A L
Sbjct: 154 NPYLFLRGLPYLVNEDDVRVFFSGLCV--DGVIFLKHHDGRNNGDAIVKFASCIDASGGL 211
Query: 202 LRHKEKIGHRLVTLVMSGA--QW 222
H+ +G R + VM G+ QW
Sbjct: 212 KCHRSFMGSRFIE-VMQGSERQW 233
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 83/201 (41%), Gaps = 31/201 (15%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIEL-------Y 75
FF + ++ L GR++G+A V+F+S DA L+ H+S MG R+IE+ +
Sbjct: 174 FFSGLCVDGVIFLKHHDGRNNGDAIVKFASCIDASGGLKCHRSFMGSRFIEVMQGSERQW 233
Query: 76 MEEGTSSKEANG---RGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQG 132
+E G + E R G S P GV + R+ S+ + +
Sbjct: 234 IEFGGDAIEKGEIPMRTEG-----HSPPRGVN--------DRHFRKRSHSKSPRRTRSRS 280
Query: 133 AVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFV 192
V + L+ L K D+ F +++ I + R T A++ F
Sbjct: 281 PV-------GFYVHLKNLSLNVSKRDLRNFFRDIDLTNEQIRFLYKDEKR-TRYAFVTFK 332
Query: 193 DKENAEKALLRHKEKIGHRLV 213
+++ + AL HK + HR V
Sbjct: 333 TQKDYKTALGFHKTILQHRPV 353
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
G + + C+ ++ P++ K +V+KF + + I + +D G G A ++F +E
Sbjct: 394 GYSGQKLCIYIRNFPFDVTKVEVQKFFADFSLAEDDIYLLYDDKGVGLGEALVKFKSEEQ 453
Query: 197 AEKA-LLRHKEKIGHRLVTLVMSGAQ 221
A KA L + +G ++ ++S AQ
Sbjct: 454 ATKAERLNRRRFLGTEVLLRLISEAQ 479
>gi|76154254|gb|AAX25744.2| SJCHGC00921 protein [Schistosoma japonicum]
Length = 805
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 6/104 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQ LP ++ +F GL I G+ I G G A+I F E+A KA+L
Sbjct: 3 VIIRLQNLPISANAANIRRFFSGLSIPEGGVHI----VGGTEGDAFIAFATDEDARKAML 58
Query: 203 RHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVRS 246
++ I V L +S S + S L +G+PV S
Sbjct: 59 LDRQTINGASVRLFLSSKAEMQS--IIESAKTSALFSSGNPVLS 100
>gi|145552659|ref|XP_001462005.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429842|emb|CAK94632.1| unnamed protein product [Paramecium tetraurelia]
Length = 441
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
++++GLP++C K D+ FLE + + +T+ G TG AY+Q E+ E H
Sbjct: 230 LKIRGLPFQCTKSDLINFLEMPRLKKDMLTMKFQQNGLFTGEAYVQVNSIEDLEYLRTFH 289
Query: 205 KEKIGHRLVTLVMS 218
K ++ HR + + S
Sbjct: 290 KSQMDHRYLEIFNS 303
>gi|7767662|gb|AAF69159.1|AC007915_11 F27F5.17 [Arabidopsis thaliana]
Length = 501
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 82/197 (41%), Gaps = 31/197 (15%)
Query: 22 QFFKPIVPV-NILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK + V ++ L+ + G+ +G VEF+S ++A++AL ++ + + I L
Sbjct: 269 NFFKDVGEVVHVRLIVNSQGKHAGWGFVEFASANEAEKALVKNGEYLHNYKISL------ 322
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQ--FLAKWMRRA----KRSEMDWALKRQGAV 134
G K+ P+ FC+ + ++RR K E L
Sbjct: 323 -------------DGAKTAPHRPPKFCLDHKVWYEDYLRRESLLIKEVEGVEGLDETPDF 369
Query: 135 LSGSAVDQCCMRLQGLPYECK---KEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQF 191
L A + + + LPY C+ + F + EIV I I D+ G G +++F
Sbjct: 370 LEEVAARKNTVFVANLPYNCRLIVPTIINFFSDVGEIV--HIRIIVDHMGEPVGCGFVEF 427
Query: 192 VDKENAEKALLRHKEKI 208
AEKAL + KI
Sbjct: 428 NSSNEAEKALQKKTGKI 444
>gi|38707995|ref|NP_944597.1| probable RNA-binding protein 19 [Danio rerio]
gi|32450902|gb|AAP82506.1| nil per os [Danio rerio]
Length = 926
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 73/182 (40%), Gaps = 34/182 (18%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+F P+ PV I + GR+SG V+ S + +RAL+ K MG RYIE++ +
Sbjct: 307 EFMMPLKPVAIRFAKNSDGRNSGYVYVDLRSEAEVERALRLDKDYMGGRYIEVFR----A 362
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQ--GAVLSGSA 139
+ N R R +KRSEM+ R+
Sbjct: 363 NNFKNDR----------------------------RSSKRSEMEKNFVRELKDDEEEEDV 394
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
+ + ++ +PY C +ED+++ + + + G A++ ++ ENA
Sbjct: 395 AESGRLFIRNMPYTCTEEDLKEVFSKHGPLSEVLFPIDSLTKKPKGFAFVTYMIPENAVS 454
Query: 200 AL 201
AL
Sbjct: 455 AL 456
>gi|326517396|dbj|BAK00065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+RL+GLP++C+ D+ KF GL+IV + H GR +G A++ F AE AL R
Sbjct: 105 AVRLRGLPFDCEDVDISKFFSGLDIV--DCLLVHKN-GRFSGEAFVVFPSSMQAEFALHR 161
Query: 204 HKEK 207
+K +
Sbjct: 162 NKRE 165
>gi|47226530|emb|CAG08546.1| unnamed protein product [Tetraodon nigroviridis]
Length = 944
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
++L+G+P+ K++ + +F+ L+ P I I + +G TG Y+ +E EKAL +
Sbjct: 306 TVKLRGVPFNVKEQQIREFMTPLK--PAAIRIGKNDSGNRTGYVYVDLHSEEQVEKALKK 363
Query: 204 HKEKIGHRLV 213
+K+ IG R +
Sbjct: 364 NKDYIGGRYI 373
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 76/184 (41%), Gaps = 37/184 (20%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+F P+ P I + +D+G +G V+ S + ++AL+++K +G RYIE++ + +
Sbjct: 323 EFMTPLKPAAIRIGKNDSGNRTGYVYVDLHSEEQVEKALKKNKDYIGGRYIEVFRVDNSG 382
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRS-EMDWALKR--QGAVLSGS 138
K RR KR ++D + R +
Sbjct: 383 GK--------------------------------ARRDKRDKDIDRSFTRNLKEGEEEED 410
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHD-YAGRCTGVAYIQFVDKENA 197
+ + ++ LPY C +E++++ + + P D + G A+I ++ ENA
Sbjct: 411 VAESGRLFVRNLPYTCTEEELKELFTKHGPLSE-MHFPIDSLTKKSKGFAFITYMIPENA 469
Query: 198 EKAL 201
AL
Sbjct: 470 VAAL 473
>gi|348551182|ref|XP_003461409.1| PREDICTED: probable RNA-binding protein 19-like [Cavia porcellus]
Length = 961
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 77/185 (41%), Gaps = 39/185 (21%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
++F P+ PV I ++ + G +G V+FSS ++ ++AL+ ++ MG RYIE++ E+
Sbjct: 310 VTEFLAPLKPVAIRIVRNAHGNKTGYIFVDFSSEEEVKKALKCNREYMGGRYIEVFREKQ 369
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRA---KRSEMDWALKRQGAVLS 136
+A + + W R E D A
Sbjct: 370 APVAKAPPKNSS---------------------KAWQGRTLGENEEEEDLA--------- 399
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHD-YAGRCTGVAYIQFVDKE 195
D + ++ LPY +ED+EK + + + P D + G A++ F+ E
Sbjct: 400 ----DSGRLFVRNLPYTSTEEDLEKLFSAYGPL-SELHYPIDTLTKKPKGFAFVTFLFPE 454
Query: 196 NAEKA 200
+A KA
Sbjct: 455 HAVKA 459
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
++L+G P+ +++V +FL L+ P I I + G TG ++ F +E +KAL
Sbjct: 295 TVKLRGAPFNVTEKNVTEFLAPLK--PVAIRIVRNAHGNKTGYIFVDFSSEEEVKKALKC 352
Query: 204 HKEKIGHRLVTL 215
++E +G R + +
Sbjct: 353 NREYMGGRYIEV 364
>gi|365812823|pdb|2LMI|A Chain A, Nmr Structure Of The Protein Bc040485 From Homo Sapiens
Length = 107
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 132 GAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYI 189
G+ L D +R QGLP+ C EDV F I NGI + G+ G A I
Sbjct: 1 GSKLEEEVDDVFLIRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALI 60
Query: 190 QFVDKENAEKALLRHKEKIGHRLVTL 215
+ +++ +KAL +H+ +G R V +
Sbjct: 61 EMESEQDVQKALEKHRMYMGQRYVEV 86
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y
Sbjct: 44 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY 87
>gi|256073174|ref|XP_002572907.1| rna-binding protein 12 (sh3/ww domain anchor protein in the
nucleus) (swan) [Schistosoma mansoni]
gi|350645108|emb|CCD60169.1| rna-binding protein 12 (sh3/ww domain anchor protein in the
nucleus) (swan), putative [Schistosoma mansoni]
Length = 923
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQ LP ++ +F GL I G+ I G G A+I F E+A KA+L
Sbjct: 3 VIIRLQNLPISANASNIRRFFSGLSIPEGGVHI----VGGTEGDAFIAFATDEDARKAML 58
Query: 203 RHKEKIGHRLVTLVMSG 219
++ I V L +S
Sbjct: 59 LDRQTINGASVRLFLSS 75
>gi|395512126|ref|XP_003760295.1| PREDICTED: RNA-binding protein 12B [Sarcophilus harrisii]
Length = 745
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 25/202 (12%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF + ++LL GR++G+ V+F++ DA LQRH+ MG R++E+ + +
Sbjct: 186 FFPGLCVDGVILLKHPTGRNNGDCLVKFATSHDALGGLQRHRHYMGSRFVEV-----SPA 240
Query: 83 KEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQ 142
E GG +K + R +R D K++ S V +
Sbjct: 241 SEQQWIDCGGSVDIKDEVH----------FRSEERSPQRGINDAHSKKRSRSKSPRRVKR 290
Query: 143 CC---------MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVD 193
+ L+ L +K D++ F ++ + I + R TG A++ F
Sbjct: 291 RSRSPHKYGFYVHLKNLSLSVEKRDIKNFFRDTDLASDQIKFLYKDQKR-TGSAFVMFKT 349
Query: 194 KENAEKALLRHKEKIGHRLVTL 215
+ AL HK + HR V +
Sbjct: 350 LRDYNSALALHKFILFHRQVLI 371
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D + L+GLPY +++V F GL + +G+ + GR G ++F +A
Sbjct: 165 DNRYLFLRGLPYSATEDEVRAFFPGLCV--DGVILLKHPTGRNNGDCLVKFATSHDALGG 222
Query: 201 LLRHKEKIGHRLVTLV-MSGAQW 222
L RH+ +G R V + S QW
Sbjct: 223 LQRHRHYMGSRFVEVSPASEQQW 245
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
G + + C+ ++ P++ K +V+KF G I + + + +D G G A ++F +E
Sbjct: 410 GHSGPKLCIYIRNFPFDVTKVEVQKFFAGFSIDEDDVYLLYDDKGVGLGEALVKFKSEEQ 469
Query: 197 AEKA-LLRHKEKIGHRLVTLVMSGAQW 222
A KA L + +G ++ ++S Q
Sbjct: 470 AMKAESLNRRRFLGTEVLLRLISEEQM 496
>gi|157109923|ref|XP_001650880.1| heterogeneous nuclear ribonucleoprotein (hnrnp) [Aedes aegypti]
gi|108878855|gb|EAT43080.1| AAEL005441-PA, partial [Aedes aegypti]
Length = 948
Score = 44.7 bits (104), Expect = 0.047, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 157 EDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTL 215
+DV +F G I NGI + +D GR TGVA I+F+ K+ AL R ++ H +V +
Sbjct: 318 DDVRRFFHGQTISSNGIKMINDKNGRRTGVAMIRFLRKDGKRYALSRDGMRLRHSVVKI 376
>gi|324497690|gb|ADY39495.1| putative RNA-binding protein [Hottentotta judaicus]
Length = 98
Score = 44.7 bits (104), Expect = 0.049, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 29 PVNILLLTDDAGRSSGEADVEFSSVDDAQRALQ-RHKSNMGDRYIELYM 76
P I L + GR +GEA V F S DA+RA+Q +++ N+G+RYIEL+M
Sbjct: 49 PECIQLQRNGDGRPNGEALVTFPSRADAERAIQEKNRHNIGNRYIELFM 97
>gi|351694750|gb|EHA97668.1| Putative RNA-binding protein 19 [Heterocephalus glaber]
Length = 955
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 78/183 (42%), Gaps = 35/183 (19%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
++F P+ PV I ++ + G +G V+FSS ++ ++AL+ ++ MG RYIE++ E+
Sbjct: 305 VTEFLAPLKPVAIRIVRNAHGNKTGYIFVDFSSEEEVKKALKCNREYMGGRYIEVFREKQ 364
Query: 80 TS-SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
+KE T + G M E D A
Sbjct: 365 VPMAKEPLKSSTKAWQG-------------------RMLGENEEEEDLA----------- 394
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHD-YAGRCTGVAYIQFVDKENA 197
D + ++ LPY +ED+EK + + + P D + G A++ F+ E+A
Sbjct: 395 --DSGRLFVRNLPYTSTEEDLEKLFSTYGPL-SELHFPIDSLTKKPKGFAFVTFLFPEHA 451
Query: 198 EKA 200
KA
Sbjct: 452 VKA 454
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
++L+G P+ +++V +FL L+ P I I + G TG ++ F +E +KAL
Sbjct: 290 TVKLRGAPFNVTEKNVTEFLAPLK--PVAIRIVRNAHGNKTGYIFVDFSSEEEVKKALKC 347
Query: 204 HKEKIGHRLVTLVMSGAQWFLSPPLTNET 232
++E +G R + + PL + T
Sbjct: 348 NREYMGGRYIEVFREKQVPMAKEPLKSST 376
>gi|348528569|ref|XP_003451789.1| PREDICTED: probable RNA-binding protein 19 [Oreochromis niloticus]
Length = 926
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ ++L+G+P+ K++ + +F+ L+ P + I + +G TG Y+ +E EKAL
Sbjct: 288 EFTVKLRGVPFNVKEKQIREFMTPLK--PAAVRIGKNESGNRTGYVYVDLHSEEEVEKAL 345
Query: 202 LRHKEKIGHRLVTL 215
++K+ IG R + +
Sbjct: 346 KKNKDYIGGRYIEV 359
>gi|440906208|gb|ELR56498.1| Putative RNA-binding protein 19 [Bos grunniens mutus]
Length = 947
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 33/180 (18%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+F P+ P I ++ + G +G V+FSS ++ ++AL+ ++ MG RYIE++ E
Sbjct: 315 EFLAPLKPAAIRVVRNAHGNKTGYVFVDFSSEEEVRKALKCNREYMGGRYIEVFRERNVP 374
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
+ +A + G K P+ W E D A D
Sbjct: 375 AAKAPLK-----NGAK--PW-----------QGWTLGEHEEEEDLA-------------D 403
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHD-YAGRCTGVAYIQFVDKENAEKA 200
+ ++ LPY +ED+EK V + + P D + G A++ F+ E+A KA
Sbjct: 404 SGRLFVRNLPYTSSEEDLEKLFSRYGPV-SELHYPIDSLTKKPKGFAFVTFMFPEHAVKA 462
>gi|302852446|ref|XP_002957743.1| hypothetical protein VOLCADRAFT_84201 [Volvox carteri f.
nagariensis]
gi|300256919|gb|EFJ41175.1| hypothetical protein VOLCADRAFT_84201 [Volvox carteri f.
nagariensis]
Length = 241
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+RL+GLP++ + D++ FLE LE V + + + D GR +G A + + E AL +
Sbjct: 36 CVRLRGLPFDVMEGDIKMFLE-LETV-DIVMVKRD--GRFSGEALVVLGSLQLVEAALSK 91
Query: 204 HKEKIGHRLVTLVMS 218
H++ IG R + + S
Sbjct: 92 HRQFIGQRFIEIFPS 106
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 35/199 (17%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+ F + V+I+++ D GR SGEA V S+ + AL +H+ +G R+IE++ S
Sbjct: 52 KMFLELETVDIVMVKRD-GRFSGEALVVLGSLQLVEAALSKHRQFIGQRFIEIF----PS 106
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
SK R + V YG + + A W
Sbjct: 107 SKRDYYRAVAAY--VSGDSYG----QQGMGMGRGGMGAGSGGTTW--------------- 145
Query: 142 QCCMRLQGLPYECKKEDVEKFLE----GL-EIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
++L+GLP+ +D+ F + G+ + P+ + + D GR TG+A +QF +
Sbjct: 146 ---LKLRGLPFAAVPDDIIAFFDDGTLGIPRLDPSRVHMWTD-GGRPTGMALVQFNTPQE 201
Query: 197 AEKALLRHKEKIGHRLVTL 215
A A + K +G R V +
Sbjct: 202 ASIARSKDKGLMGTRYVEI 220
>gi|350036612|dbj|GAA34386.1| RNA-binding protein 12 [Clonorchis sinensis]
Length = 964
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQ LP ++ +F GL I G+ I G G A+I F E+A KA+L
Sbjct: 3 VIIRLQNLPMSANASNIRRFFGGLAIPEGGVHI----VGGTDGDAFIAFATDEDARKAML 58
Query: 203 RHKEKIGHRLVTLVMS 218
++ I V L +S
Sbjct: 59 LDRQAINGAPVRLFLS 74
>gi|91094045|ref|XP_968644.1| PREDICTED: similar to CG7879 CG7879-PA [Tribolium castaneum]
gi|270003124|gb|EEZ99571.1| hypothetical protein TcasGA2_TC001555 [Tribolium castaneum]
Length = 779
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RLQ LP+ D+ +F GL I G+ I G G A+I F E+A +A R+
Sbjct: 5 IRLQNLPWSANALDIRQFFHGLSIPEGGVHI----VGGEQGDAFIAFSTDEDARQAFARN 60
Query: 205 KEKIGHRLVTLVMS 218
KI ++L++S
Sbjct: 61 NGKIKEIQISLMLS 74
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
CC+RLQ P+ D+ +F +G I GI +D G TG+ YIQF +AL
Sbjct: 333 CCVRLQ--PFYGGYGDIRRFFQGSFISNVGIKFINDDFGHRTGIVYIQFGHPLGKNEALR 390
Query: 203 RHKE 206
++ E
Sbjct: 391 KNGE 394
>gi|410562529|pdb|2LXU|A Chain A, Solution Nmr Structure Of The Eukaryotic Rna Recognition
Motif, Rrm1, From The Heterogeneous Nuclear
Ribonucleoprotein H From Homo Sapiens, Northeast
Structural Genomics Consortium (Nesg) Target Hr8614a
Length = 108
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 11/98 (11%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
++++GLP+ C ++V++F +I GI + GR +G A+++ ++ + AL
Sbjct: 10 VKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALK 69
Query: 203 RHKEKIGHRLVTLVMSGA---QWFL------SPPLTNE 231
+ +E +GHR V + S W L SP N+
Sbjct: 70 KDRETMGHRYVEVFKSNNVEMDWVLKHTGPNSPDTAND 107
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 48 GRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF 83
>gi|194214277|ref|XP_001492007.2| PREDICTED: probable RNA-binding protein 19 [Equus caballus]
Length = 962
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+F P+ PV I ++ + G +G V+FSS ++ ++AL+ ++ MG RYIE++ E+
Sbjct: 314 EFLAPLKPVAIRIVRNAHGNKTGYVFVDFSSEEEVKKALKCNREYMGGRYIEVFREKNIP 373
Query: 82 SKE 84
+ E
Sbjct: 374 TAE 376
>gi|159164103|pdb|2DHA|A Chain A, Solution Structure Of The Second Rna Recognition Motif In
Hypothetical Protein Flj201171
Length = 123
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQF 191
S +Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 19 SKENQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLF 75
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 76 ACEEYAQNALRKHKDLLGKRYIELFRSTA 104
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+
Sbjct: 57 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELF 100
>gi|324501689|gb|ADY40749.1| Heterogeneous nuclear ribonucleoprotein H2 [Ascaris suum]
Length = 152
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
++ +GLP+ C +E++ F + + IT+ + R +G A++ F + E+ E AL R
Sbjct: 57 VKCRGLPWSCTEEEIRIFFQPADRSIVKITLTKNRDARPSGEAFVAFNNNEDYEYALTRD 116
Query: 205 KEKIGHRLV 213
K+ +G R +
Sbjct: 117 KQHMGKRYI 125
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 23 FFKPI--VPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF+P V I L + R SGEA V F++ +D + AL R K +MG RYIE+++
Sbjct: 74 FFQPADRSIVKITLTKNRDARPSGEAFVAFNNNEDYEYALTRDKQHMGKRYIEVWI 129
>gi|426247328|ref|XP_004017438.1| PREDICTED: probable RNA-binding protein 19 [Ovis aries]
Length = 916
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 39/64 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+F P+ PV I ++ + G +G V+FSS ++ ++AL+ ++ MG RYIE++ E
Sbjct: 270 EFLAPLKPVAIRIVRNAHGNKTGYVFVDFSSEEEVRKALKCNREYMGGRYIEVFRERNVP 329
Query: 82 SKEA 85
+ +A
Sbjct: 330 AAKA 333
>gi|7739449|gb|AAF68852.1|AF132364_1 hnRNP 2H9E [Homo sapiens]
gi|7739439|gb|AAF68846.1| hnRNP 2H9E [Homo sapiens]
Length = 139
Score = 44.3 bits (103), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 21 SQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNM 67
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K+NM
Sbjct: 75 ANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNM 121
>gi|291407017|ref|XP_002719829.1| PREDICTED: RBD (RNA binding domain) protein family member
(rbd-1)-like [Oryctolagus cuniculus]
Length = 1025
Score = 44.3 bits (103), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
+F P+ PV I ++ + G +G V+FSS ++ ++AL+ ++ MG RYIE++ E+
Sbjct: 286 EFLAPLKPVAIRIVRNAHGNKTGYVFVDFSSEEEVKKALKCNREYMGGRYIEVFREK 342
>gi|159468195|ref|XP_001692268.1| hypothetical protein CHLREDRAFT_189395 [Chlamydomonas reinhardtii]
gi|158278454|gb|EDP04218.1| predicted protein [Chlamydomonas reinhardtii]
Length = 913
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 156 KEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTL 215
++D+ +F ++ GI+ ++ GR +G+A+ +FV KE A KAL ++ E IG R V L
Sbjct: 631 EDDIRQFFAPYDL--KGISFVYEPDGRPSGLAFAEFVSKEEALKALSKNGEYIGQRYVRL 688
Query: 216 V 216
+
Sbjct: 689 L 689
>gi|301762464|ref|XP_002916650.1| PREDICTED: RNA-binding protein 12B-like [Ailuropoda melanoleuca]
gi|281349037|gb|EFB24621.1| hypothetical protein PANDA_004747 [Ailuropoda melanoleuca]
Length = 985
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 79/196 (40%), Gaps = 20/196 (10%)
Query: 44 GEADVEFSSVDDAQRALQRHKSNMGDRYIELYME-EGTSSKEANGRGTGGFGGVKSTPYG 102
GEA + F++ +DA+RA+ R + D +EL++ + K + T G +
Sbjct: 41 GEAFIIFATDEDARRAISRSGGFIKDSSVELFLSSKAEMQKTIEMKRTDRIGRERPGSGA 100
Query: 103 VGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA--------------VDQCCMRLQ 148
G +S F+ S + + + + + L+
Sbjct: 101 SGAGSLSNFVEAVKEETSNSGYGSPINQDAGFHTNGTGHGDLRPRKTRPLKAENPYLFLR 160
Query: 149 GLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKI 208
GLPY ++DV F GL + +G+ + GR G A ++F +A L H+ +
Sbjct: 161 GLPYLVNEDDVRVFFSGLCV--DGVIFLKHHDGRNNGDAIVKFASCIDASGGLKCHRSFM 218
Query: 209 GHRLVTLVMSGA--QW 222
G R + VM G+ QW
Sbjct: 219 GSRFIE-VMQGSEQQW 233
>gi|432874359|ref|XP_004072458.1| PREDICTED: probable RNA-binding protein 19-like [Oryzias latipes]
Length = 921
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ ++L+G+P+ K++ +++F+ L P I I + +G+ TG Y+ +E KAL
Sbjct: 287 EFTVKLRGVPFSVKEQQIKEFMTPLR--PAAIRIGKNESGQRTGYVYVDLHSEEEVNKAL 344
Query: 202 LRHKEKIGHRLVTL 215
++K+ IG R + +
Sbjct: 345 KKNKDYIGGRYIEV 358
>gi|348534026|ref|XP_003454504.1| PREDICTED: RNA-binding protein 12B-A-like [Oreochromis niloticus]
Length = 634
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 23/191 (12%)
Query: 121 RSEMDWALKRQGAVLSGSA----------VDQCCMRLQGLPYECKKEDVEKFLEGLEIVP 170
R M+ + R+ A SG D + L+GLP+ ++++ F GL V
Sbjct: 106 RRSMEPEMGRRSASRSGDTPPPLLQRAPNTDDVFLFLKGLPFSVTEKEICDFFGGL--VV 163
Query: 171 NGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG-AQWFLSPPLT 229
+ + + + G G +++F +E+A + L R +E IG R + + + W +T
Sbjct: 164 DEVVLIKNRQGLNNGTGFVKFATREDAMEGLKRDREYIGSRYIEISTTTLNDWHR---VT 220
Query: 230 NETPISRLDLTGSPVRSTICVLCHP---LTPRS-VRPRSVRQSEHEWWALARLGSFLISR 285
P + +D + RS I P + RS V R + SE E+ L SF + +
Sbjct: 221 GRMPTAIIDGSFQRGRSPIPNQRDPQHRVRSRSPVAQRRIAPSEGEYCVLLENLSFAVEK 280
Query: 286 THQIIIPRSYH 296
I R +H
Sbjct: 281 ED---IKRLFH 288
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 98/234 (41%), Gaps = 21/234 (8%)
Query: 14 ITYCLLCSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIE 73
+T +C FF +V ++L+ + G ++G V+F++ +DA L+R + +G RYIE
Sbjct: 149 VTEKEICD-FFGGLVVDEVVLIKNRQGLNNGTGFVKFATREDAMEGLKRDREYIGSRYIE 207
Query: 74 LYMEEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGA 133
+ GR + + G I R RS + +R+ A
Sbjct: 208 ISTTTLNDWHRVTGRMP---TAIIDGSFQRGRSPIPNQRDPQHRVRSRSPV---AQRRIA 261
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVD 193
G + C+ L+ L + +KED+++ ++ + I D G+ A + F
Sbjct: 262 PSEG----EYCVLLENLSFAVEKEDIKRLFHNAKLGDDQILHLIDSDGKRKRSALVLFKS 317
Query: 194 KENAEKALLRHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVRST 247
+ +AL K + +RLV + P++ E I+ L G+ VR +
Sbjct: 318 LRDYCEALAHEKRQFFNRLVH----------TRPVSRENMIALLKPQGTTVRPS 361
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
C++L LP++ + E++ F G I+P +++ +D +G+ G A + F + A A+
Sbjct: 558 TCVQLVNLPFQIRSEEIYDFCYGYRIIPGSVSLQYDQSGKPKGSATLVFESRREALTAVE 617
Query: 203 RHKEK-IGHRLVTLVM 217
+ IG R + L++
Sbjct: 618 ELGGRPIGQRKIKLLL 633
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQGL ED+ +F GL+I G+ I G A+I F E+A +A+
Sbjct: 3 VVIRLQGLRVTAGSEDIRRFFTGLKIPDGGVHI----IGGERDEAFIIFASDEDARRAMT 58
Query: 203 RHKEKIGHRLVTLVMS 218
R I VTL++S
Sbjct: 59 RSGGVIRGSPVTLLLS 74
>gi|7739447|gb|AAF68851.1|AF132363_2 hnRNP 2H9D [Homo sapiens]
gi|7739438|gb|AAF68845.1| hnRNP 2H9D [Homo sapiens]
gi|119574674|gb|EAW54289.1| heterogeneous nuclear ribonucleoprotein H3 (2H9), isoform CRA_f
[Homo sapiens]
Length = 145
Score = 43.9 bits (102), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 21 SQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNM 67
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K+NM
Sbjct: 81 ANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNM 127
>gi|417405465|gb|JAA49443.1| Putative rna-binding protein rrm superfamily [Desmodus rotundus]
Length = 968
Score = 43.9 bits (102), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 9/79 (11%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG-- 79
+F P+ P I ++ + G +G V+FSS ++ ++AL+ ++ MG RYIE++ E+
Sbjct: 314 EFLAPLKPAAIRIVRNAHGNKTGYVFVDFSSEEEVKKALKCNREYMGGRYIEVFREQNVP 373
Query: 80 -------TSSKEANGRGTG 91
TS+K GR G
Sbjct: 374 IAKGTLKTSAKPWQGRTLG 392
>gi|147898530|ref|NP_001089482.1| uncharacterized protein LOC734533 [Xenopus laevis]
gi|66910772|gb|AAH97695.1| MGC115235 protein [Xenopus laevis]
Length = 668
Score = 43.9 bits (102), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 79/194 (40%), Gaps = 16/194 (8%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF + +++ L +G +G A V F++ DA AL+R MG + L + + T
Sbjct: 162 FFAGLSVEDVIFLKYPSGLRNGNAIVRFATSGDAHEALKRSGHLMGSTPVSLMLSDETEW 221
Query: 83 KEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQ 142
+A GG ++ S K + + R E+ A R S ++
Sbjct: 222 TKA--------GGTRARKRESSPVTSSDDRKKSVSHS-RHELSRARAR-------SPYEE 265
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+ L LPY+ K D++ L + + IT D++G+ T +++ A
Sbjct: 266 RFVHLINLPYDVNKRDIKAHFGNLAMKDSQITFLRDWSGKRTREGFVKLTSLSQYRDACA 325
Query: 203 RHKEKIGHRLVTLV 216
+H RLV ++
Sbjct: 326 QHGRVFCSRLVDVL 339
>gi|402594752|gb|EJW88678.1| hypothetical protein WUBG_00416 [Wuchereria bancrofti]
Length = 154
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 11 LIHITYCLLCSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDR 70
L + L +FF+P+ V I L ++ R SG+A V FS++ +A+ AL R+K+NMG R
Sbjct: 95 LPYSVTTLDIEEFFRPLNCVEIKLGYNEERRLSGDALVTFSTMAEAREALSRNKNNMGTR 154
>gi|326512460|dbj|BAJ99585.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 344
Score = 43.9 bits (102), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGL---EIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
++++G P E ++++ +F EGL +I + + IP+ GR ++ F D + A
Sbjct: 245 TVKVKGQPAETTEDEIREFFEGLSVGKISMHSLEIPN---GRTVTEVFVTFNDPADVNAA 301
Query: 201 LLRHKEKIGHRLVTLVMSGAQ 221
L + ++KIG R V++ S A+
Sbjct: 302 LEKDRQKIGSRWVSIKRSSAK 322
>gi|114051910|ref|NP_001039420.1| probable RNA-binding protein 19 [Bos taurus]
gi|88954099|gb|AAI14030.1| RNA binding motif protein 19 [Bos taurus]
Length = 920
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 39/183 (21%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+F P+ PV I ++ + G +G V+FSS ++ ++AL+ ++ MG RYIE++ E
Sbjct: 273 EFLAPLKPVAIRIVRNAHGNKTGYVFVDFSSEEEVRKALKCNREYMGGRYIEVFRERNIP 332
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRA---KRSEMDWALKRQGAVLSGS 138
V P G W R E D A
Sbjct: 333 --------------VAKAPLKNGA-------KPWQGRTLGEHEEEEDLA----------- 360
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHD-YAGRCTGVAYIQFVDKENA 197
D + ++ LPY +ED+EK V + + P D + G A++ F+ E+A
Sbjct: 361 --DSGRLFVRNLPYTSSEEDLEKLFSRYGPV-SELHYPIDSLTKKPKGFAFVTFMFPEHA 417
Query: 198 EKA 200
KA
Sbjct: 418 VKA 420
>gi|390468249|ref|XP_002753088.2| PREDICTED: probable RNA-binding protein 19 [Callithrix jacchus]
Length = 1066
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 39/61 (63%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+F P+ PV I ++ + G +G V+FS+ ++ ++AL+ ++ MG RYIE++ E+ +
Sbjct: 418 EFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKKALKCNREYMGGRYIEVFREKNVT 477
Query: 82 S 82
+
Sbjct: 478 T 478
>gi|159164096|pdb|2DGW|A Chain A, Solution Structure Of The Second Rna Recognition Motif
In Rna-Binding Protein 19
Length = 91
Score = 43.5 bits (101), Expect = 0.11, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 38/61 (62%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+F P+ PV I ++ + G +G V+FS+ ++ ++AL+ ++ MG RYIE++ E+
Sbjct: 29 EFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGRYIEVFREKSGP 88
Query: 82 S 82
S
Sbjct: 89 S 89
>gi|71896463|ref|NP_001026115.1| RNA-binding protein 12B [Gallus gallus]
gi|53136630|emb|CAG32644.1| hypothetical protein RCJMB04_31o3 [Gallus gallus]
Length = 698
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 82/187 (43%), Gaps = 12/187 (6%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
++L+ G ++G V+F++ DA L+RH+ MG R+IE+ E
Sbjct: 202 VILIKHRNGLNNGNCLVKFATPGDALEGLKRHRQYMGQRFIEISPTTEERWIE------- 254
Query: 92 GFGGVKSTPYGVGIFCISQFLAK---WMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQ 148
+GG P + F + + +M A++ + +RQ + + + L+
Sbjct: 255 -YGGRVDMPNEMDHFLCKEHSPRSSGYM-HARKHSHSRSPRRQRTRSQSPSGQEYYIHLR 312
Query: 149 GLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKI 208
L +K D+ +F L+I I I + R T A++ ++ + + AL H++ +
Sbjct: 313 NLSTNVEKRDLREFFPDLDISNKQIKILSEKHQRRTRDAFVMLKNERDYQAALECHRKVL 372
Query: 209 GHRLVTL 215
+R V +
Sbjct: 373 LNRSVYI 379
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D + L+G+PY ++ V FL G+ + +G+ + G G ++F +A +
Sbjct: 172 DDLYLFLRGIPYSATEDAVRDFLSGIRV--DGVILIKHRNGLNNGNCLVKFATPGDALEG 229
Query: 201 LLRHKEKIGHRLVTL 215
L RH++ +G R + +
Sbjct: 230 LKRHRQYMGQRFIEI 244
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ C ++ P++ K +V++F E +I + I + +D G G A ++F +E A KA
Sbjct: 422 KMCAYVRNFPFDVTKVEVQRFFERFDIDEDDIYLLYDDKGVGLGEALVKFKSEEQAMKAE 481
Query: 202 -LRHKEKIGHRLVTLVMSGAQW 222
L H+ +G ++ ++S Q
Sbjct: 482 NLNHQRFLGTEVLLRLISEEQM 503
>gi|47226618|emb|CAG07777.1| unnamed protein product [Tetraodon nigroviridis]
Length = 183
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 10/90 (11%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVP--NGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
++++GLP+ C +D+ KF I GI + + GR +G A+I+ +E+ KAL
Sbjct: 8 VQVKGLPWSCTADDLLKFFSECRIRDGVKGIHLTVNRMGRPSGRAFIEMEHEEDVNKALE 67
Query: 203 RHKEKIGHRLVTLVMSGAQWFLSPPLTNET 232
+H++ +G R V LSPP T
Sbjct: 68 KHRQYLGPRYVE--------GLSPPKAAST 89
>gi|313244026|emb|CBY14896.1| unnamed protein product [Oikopleura dioica]
Length = 407
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
+FF PI ++ + GR++G A F S DD A+Q++K +G RY+ELY
Sbjct: 283 EFFSPIDLTDVRIEIGKDGRTTGNAFAAFFSDDDVWNAMQKNKQMLGTRYVELY 336
>gi|296478475|tpg|DAA20590.1| TPA: RNA binding motif protein 19 [Bos taurus]
Length = 825
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 39/183 (21%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+F P+ PV I ++ + G +G V+FSS ++ ++AL+ ++ MG RYIE++ E
Sbjct: 273 EFLAPLKPVAIRIVRNAHGNKTGYVFVDFSSEEEVRKALKCNREYMGGRYIEVFRERNIP 332
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRA---KRSEMDWALKRQGAVLSGS 138
V P G W R E D A
Sbjct: 333 --------------VAKAPLKNGA-------KPWQGRTLGEHEEEEDLA----------- 360
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHD-YAGRCTGVAYIQFVDKENA 197
D + ++ LPY +ED+EK V + + P D + G A++ F+ E+A
Sbjct: 361 --DSGRLFVRNLPYTSSEEDLEKLFSRYGPV-SELHYPIDSLTKKPKGFAFVTFMFPEHA 417
Query: 198 EKA 200
KA
Sbjct: 418 VKA 420
>gi|431914230|gb|ELK15488.1| Putative RNA-binding protein 19 [Pteropus alecto]
Length = 949
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 37/58 (63%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
+F P+ PV I ++ + G +G V+FSS ++ ++AL+ ++ MG RYIE++ E+
Sbjct: 316 EFLAPLKPVAIRIVRNAHGNKTGYIFVDFSSEEEVKKALKCNRDYMGGRYIEVFREKN 373
>gi|213407206|ref|XP_002174374.1| U4/U6 snRNA-associated-splicing factor PRP24 [Schizosaccharomyces
japonicus yFS275]
gi|212002421|gb|EEB08081.1| U4/U6 snRNA-associated-splicing factor PRP24 [Schizosaccharomyces
japonicus yFS275]
Length = 999
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+ + + + C K DVEKF V N + +P R G Y+ +K+ AE+AL
Sbjct: 751 LYVTNIDFACTKTDVEKFFSRYGSVEN-VRLPSRNPYRHAGFGYVVMSNKDEAERALSAT 809
Query: 205 KEKIGHRLVTLVMSGAQWFLSPP 227
E++G R++ +V+S A+ PP
Sbjct: 810 GERLGSRVLNVVISVAK----PP 828
>gi|340501460|gb|EGR28246.1| hypothetical protein IMG5_180460 [Ichthyophthirius multifiliis]
Length = 861
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
L LP+E K+E+++K + ++I I I D G C G +YI+F D+ + +KAL
Sbjct: 600 LNNLPFEIKEEEIQKQFQDIQIKE--IRIIKDDKGLCRGYSYIEFQDENDVQKAL 652
>gi|410976696|ref|XP_003994750.1| PREDICTED: probable RNA-binding protein 19 [Felis catus]
Length = 994
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 39/185 (21%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
++F P+ PV I ++ + G +G V+FSS ++ ++AL+ ++ MG RYIE++ E
Sbjct: 303 VTEFLAPLRPVAIRIVRNAHGNKTGYIFVDFSSEEEVKQALKCNREYMGGRYIEVFRE-- 360
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRA---KRSEMDWALKRQGAVLS 136
K+ P G S W R E D A
Sbjct: 361 -----------------KNAPTAKGPLKNS--AKPWPGRTLGENEEEEDLA--------- 392
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHD-YAGRCTGVAYIQFVDKE 195
D + ++ LPY +ED+E+ + + + P D + G A++ F+ E
Sbjct: 393 ----DSGRLFVRNLPYSSTEEDLEQLFSRFGPL-SELHYPIDSLTKKPKGFAFVTFMFPE 447
Query: 196 NAEKA 200
+A KA
Sbjct: 448 HAVKA 452
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 14/112 (12%)
Query: 129 KRQGAVLSGSAVDQCC----------MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHD 178
KR GA +G+ VD+ +RL+G P+ +++V +FL L P I I +
Sbjct: 265 KRPGA--AGAEVDKPATQKEPPTPHTVRLRGAPFNVTEKNVTEFLAPLR--PVAIRIVRN 320
Query: 179 YAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGAQWFLSPPLTN 230
G TG ++ F +E ++AL ++E +G R + + PL N
Sbjct: 321 AHGNKTGYIFVDFSSEEEVKQALKCNREYMGGRYIEVFREKNAPTAKGPLKN 372
>gi|410987464|ref|XP_004000021.1| PREDICTED: RNA-binding protein 12B [Felis catus]
Length = 999
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 76/190 (40%), Gaps = 20/190 (10%)
Query: 50 FSSVDDAQRALQRHKSNMGDRYIELYME-EGTSSKEANGRGTGGFGGVKSTPYGVGIFCI 108
F++ +DA+RA+ R + D +EL++ + K + T G + G +
Sbjct: 60 FATDEDARRAISRSGGFIKDSSVELFLSSKAEMQKTIEMKRTDRIGRERPGSGASGAGSL 119
Query: 109 SQFLAKWMRRAKRSEMDWALKRQGAVLSGSA--------------VDQCCMRLQGLPYEC 154
S F+ A S + + + + + L+GLPY
Sbjct: 120 SNFVEALKEEASNSGYGSPINQDAGFHTNGTGHGDLRPRKTRPLKAENPYLFLRGLPYLV 179
Query: 155 KKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVT 214
++DV F GL + +G+ + GR G A ++F +A L H+ +G R +
Sbjct: 180 NEDDVRVFFSGLCV--DGVIFLKHHDGRNNGDAIVKFASCIDASGGLKCHRSFMGSRFIE 237
Query: 215 LVMSGA--QW 222
VM G+ QW
Sbjct: 238 -VMQGSEQQW 246
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 131 QGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
Q G + C+ ++ P++ K +V+KF + + I + +D G G A ++
Sbjct: 401 QKYSQEGYPGQKLCIYIRNFPFDVTKVEVQKFFADFSLAEDDIYLLYDDKGVGLGEALVK 460
Query: 191 FVDKENAEKA-LLRHKEKIGHRLVTLVMSGAQ 221
F +E A KA L + +G ++ ++S AQ
Sbjct: 461 FKSEEQAMKAERLNRRRFLGTEVLLRLISEAQ 492
>gi|225462880|ref|XP_002273141.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Vitis
vinifera]
Length = 179
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Query: 108 ISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLE 167
++Q L + M ++ D + A S VD + + + Y C E+V++ +
Sbjct: 21 LNQRLEQMMEEKPKAHNDMPSVQAAAQASREEVDSRSVFVGNVDYSCTPEEVQQHFQACG 80
Query: 168 IVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTL 215
V N +TI + G+ G AY++F++ E ++ALL ++ ++ R + +
Sbjct: 81 TV-NRVTIRSNKYGQPKGYAYVEFLETEAVQEALLLNESELHGRQLKV 127
>gi|449268059|gb|EMC78930.1| putative RNA-binding protein 19, partial [Columba livia]
Length = 922
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 82/222 (36%), Gaps = 42/222 (18%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF P+ PV I + G++SG V+ S D QRAL+R K +G R IE++ T
Sbjct: 317 EFFLPLKPVAIRIGKKARGKNSGYVFVDLKSEADMQRALKRKKEYLGGRCIEVFRCSNTP 376
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
+ A + W R + E + L G +
Sbjct: 377 KETAPAKPDN---------------------QPWQRIMRDDEEEEDLAESGRLF------ 409
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHD-YAGRCTGVAYIQFVDKENAEKA 200
++ LP+ +ED+EK + + I P D + G A++ ++ E+A KA
Sbjct: 410 -----VRNLPFTSTEEDLEKIFSKYGPLSD-IHFPIDRLTKKPKGFAFVTYMIPEHAVKA 463
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGS 242
L V G L P + I D GS
Sbjct: 464 YA--------ELDGQVFQGRMMHLLPSTIRKEKIKDADAEGS 497
>gi|326917887|ref|XP_003205226.1| PREDICTED: RNA-binding protein 12B-like [Meleagris gallopavo]
Length = 671
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 82/187 (43%), Gaps = 12/187 (6%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
++L+ G ++G V+F++ DA L+RH+ MG R+IE+ E
Sbjct: 202 VILIKHRNGLNNGNCLVKFATPGDALEGLKRHRQYMGQRFIEISPTTEERWIE------- 254
Query: 92 GFGGVKSTPYGVGIFCISQFLAK---WMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQ 148
+GG P + F + + +M A++ + +RQ + + + L+
Sbjct: 255 -YGGRVDMPNEMDHFFCKEHSPRSSGYM-HARKHSHSRSPRRQRTRSRSPSGQEYYIHLR 312
Query: 149 GLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKI 208
L +K D+ +F L+I I I + R T A++ ++ + + AL H++ +
Sbjct: 313 NLSTNVEKRDLREFFPDLDISNKQIKILSEKHQRRTRDAFVMLRNERDYQAALECHRKVL 372
Query: 209 GHRLVTL 215
+R V +
Sbjct: 373 LNRSVYI 379
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D + L+G+PY ++ V FL G+ + +G+ + G G ++F +A +
Sbjct: 172 DDLYLFLRGIPYSATEDAVRDFLSGIRV--DGVILIKHRNGLNNGNCLVKFATPGDALEG 229
Query: 201 LLRHKEKIGHRLVTL 215
L RH++ +G R + +
Sbjct: 230 LKRHRQYMGQRFIEI 244
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ C ++ P++ K +V +F E +I + I + +D G G A ++F +E A KA
Sbjct: 422 KICAYVRNFPFDVTKVEVRRFFERFDIDEDDIYLLYDDKGVGLGEALVKFKSEEQAMKAE 481
Query: 202 -LRHKEKIGHRLVTLVMSGAQW 222
L H+ +G ++ ++S Q
Sbjct: 482 NLNHQRYLGTEVLLRLISEEQM 503
>gi|401825695|ref|XP_003886942.1| RNA binding domain-containing protein [Encephalitozoon hellem ATCC
50504]
gi|392998099|gb|AFM97961.1| RNA binding domain-containing protein [Encephalitozoon hellem ATCC
50504]
Length = 274
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 60/144 (41%), Gaps = 26/144 (18%)
Query: 115 WMRRAKRSEMDWALKRQGAVLSGSAV-----------DQCCMRLQGLPYECKKEDVEKFL 163
++ +K ++ ALK G V G V + + + +P+EC K ++K+
Sbjct: 112 YVEFSKEEDVKKALKLDGTVFLGREVVVNMAHPRENKQRHTIYISNIPFECDKRKLKKYF 171
Query: 164 EGL-EIVPNGITIPHDYAG-RCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGAQ 221
E + E+V G++ P+D R G ++ F +KE+ EK L + LV +
Sbjct: 172 EEMGEVV--GMSFPYDKENDRLKGYGFVDFGNKEDYEKVLKKK----------LVFEDSS 219
Query: 222 WFLSPPLTNETPISRLDLTGSPVR 245
+ P N R D G R
Sbjct: 220 IYQRPAYKNNKE-DRKDFNGKGPR 242
>gi|12851402|dbj|BAB29027.1| unnamed protein product [Mus musculus]
Length = 723
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 80/193 (41%), Gaps = 11/193 (5%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF + ++LL GR++G+A V+F+S DA L+ H+S MG R+IE+ +G+
Sbjct: 60 FFSGLCVDGVILLKHHDGRNNGDAIVKFASCVDASGGLKCHRSFMGSRFIEVM--QGSEQ 117
Query: 83 KEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQ 142
+ GT GG + + R+ S+ A R
Sbjct: 118 QWIEFGGTATEGGDTPRMRSEEHSPSRRINGRHFRKRSHSKSPRARSRSPLGF------- 170
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+ L+ L K D+ ++ + I + R T A++ F ++++ AL
Sbjct: 171 -YVHLKNLSLNTNKRDLRNLFRDTDLTNDQIKFVYK-DERRTRYAFVMFKNQKDYNTALG 228
Query: 203 RHKEKIGHRLVTL 215
HK + +R V +
Sbjct: 229 LHKTVLQYRPVLI 241
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKE 206
L+GLPY ++DV F GL + +G+ + + GR G A ++F +A L H+
Sbjct: 45 LRGLPYLVNEDDVRVFFSGLCV--DGVILLKHHDGRNNGDAIVKFASCVDASGGLKCHRS 102
Query: 207 KIGHRLVTLVMSGA--QW 222
+G R + VM G+ QW
Sbjct: 103 FMGSRFIE-VMQGSEQQW 119
>gi|303388667|ref|XP_003072567.1| splicing factor CC1-like protein [Encephalitozoon intestinalis ATCC
50506]
gi|303301708|gb|ADM11207.1| splicing factor CC1-like protein [Encephalitozoon intestinalis ATCC
50506]
Length = 295
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 15/97 (15%)
Query: 120 KRSEMDWALKRQGAVLSGSAV-----------DQCCMRLQGLPYECKKEDVEKFLEGL-E 167
K ++ ALK G V G V ++ + + LP+EC K+ ++K+ E + E
Sbjct: 138 KEEDVKKALKLDGTVFLGREVIVNMAHPRTNKEKHTIYISNLPFECDKKKLKKYFEEMGE 197
Query: 168 IVPNGITIPHDYAG-RCTGVAYIQFVDKENAEKALLR 203
+V G++ P+D R G ++ F +KE+ EK L +
Sbjct: 198 VV--GMSFPYDKENDRLKGYGFVDFGNKEDYEKVLKK 232
>gi|354466972|ref|XP_003495945.1| PREDICTED: probable RNA-binding protein 19 [Cricetulus griseus]
gi|344237019|gb|EGV93122.1| putative RNA-binding protein 19 [Cricetulus griseus]
Length = 954
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
++L+G P+ +++V +FL L+ P I I + G TG ++ +E +KAL
Sbjct: 294 TVKLRGAPFNVTEKNVTEFLAPLK--PVAIRIVRNAHGNKTGYVFVDLSSEEEVKKALKC 351
Query: 204 HKEKIGHRLVTLVMSGAQWFLSPPLTNETP 233
++E +G R + + A PP ++ TP
Sbjct: 352 NREYMGGRYIEVFREKAPSAHGPPKSSTTP 381
>gi|405970177|gb|EKC35107.1| Eukaryotic translation initiation factor 4B [Crassostrea gigas]
Length = 1065
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 149 GLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKI 208
LPYE ++ +E F + L++V + +P D GR G Y++F D+++ AL + E +
Sbjct: 152 NLPYEATEDLIENFFKNLKVV--NVRLPTD-QGRLRGFGYVEFEDRQSLIDALGLNDENM 208
Query: 209 GHRLVTLVMSG 219
G R + + ++G
Sbjct: 209 GGRKMRVDLAG 219
>gi|307179523|gb|EFN67837.1| RNA-binding protein 12 [Camponotus floridanus]
Length = 873
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 68/157 (43%), Gaps = 18/157 (11%)
Query: 136 SGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+GS+ C+ ++ +P D+ +G+ I +G+ I +D G G+AYI+F E
Sbjct: 436 NGSSSGGHCVEVRNMPLTATYADLRHAFQGIYIRKDGMKIINDNHGNRVGIAYIKFGKAE 495
Query: 196 NAEKALLRHKEKIGHRLV----TLVMSGAQWFLSPPLTNETPISRLDLTGSPVRSTICVL 251
E+AL G R V V+ + + + +P D +R+++C+L
Sbjct: 496 GKEQAL------TGTRYVRNSEVEVLHLDESIFDKAVNSYSPDKEDD---GDLRNSMCIL 546
Query: 252 CHPLTPRSVRPRSVRQSEHEWWALARLGSFLISRTHQ 288
L P + + + H+W ++ I+ T +
Sbjct: 547 LTEL-PSFTKEMDIAKLFHDW----KINDLFITNTKE 578
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 129 KRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAY 188
KR+ +S + D C+ ++GLP++ D+ F + IVP I + + G+ G +
Sbjct: 625 KREHEQVSLNQTD--CILMRGLPFQTIDRDIFDFFSDIGIVPLCIHMMLNQQGKPAGECF 682
Query: 189 IQFVDKENAEKALLRHKEKIGHRLVTL 215
+F E AE+A+ ++ +G + T+
Sbjct: 683 CEFDSAEKAERAIAKNGLPLGKNVPTI 709
>gi|149052455|gb|EDM04272.1| heterogeneous nuclear ribonucleoprotein H1, isoform CRA_a [Rattus
norvegicus]
Length = 96
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
++++GLP+ C ++V++F +I GI + GR +G A+++ ++ + AL
Sbjct: 13 VKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALK 72
Query: 203 RHKEKIGHRLV 213
+ +E +GHR V
Sbjct: 73 KDRETMGHRYV 83
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIE 73
GR SGEA VE S D+ + AL++ + MG RY+E
Sbjct: 51 GRPSGEAFVELESEDEVKLALKKDRETMGHRYVE 84
>gi|402887773|ref|XP_003907256.1| PREDICTED: probable RNA-binding protein 19 [Papio anubis]
Length = 998
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 38/59 (64%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++F P+ PV I ++ + G +G V+FS+ ++ ++AL+ ++ MG RYIE++ E+
Sbjct: 348 VTEFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGRYIEVFREK 406
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
++L+G P+ +++V +FL L+ P I I + G TG ++ F ++E ++AL
Sbjct: 333 TVKLRGAPFNVTEKNVTEFLAPLK--PVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKC 390
Query: 204 HKEKIGHRLVTL 215
++E +G R + +
Sbjct: 391 NREYMGGRYIEV 402
>gi|109098882|ref|XP_001106082.1| PREDICTED: probable RNA-binding protein 19 [Macaca mulatta]
Length = 998
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 41/71 (57%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
++F P+ PV I ++ + G +G V+FS+ ++ ++AL+ ++ MG RYIE++ E+
Sbjct: 348 VTEFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGRYIEVFREKN 407
Query: 80 TSSKEANGRGT 90
+ + T
Sbjct: 408 VPTTNVAPKNT 418
Score = 37.4 bits (85), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
++L+G P+ +++V +FL L+ P I I + G TG ++ F ++E ++AL
Sbjct: 333 TVKLRGAPFNVTEKNVTEFLAPLK--PVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKC 390
Query: 204 HKEKIGHRLVTL 215
++E +G R + +
Sbjct: 391 NREYMGGRYIEV 402
>gi|156407424|ref|XP_001641544.1| predicted protein [Nematostella vectensis]
gi|156228683|gb|EDO49481.1| predicted protein [Nematostella vectensis]
Length = 687
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDY-AGRCTGVAYIQFVDKENAEKALLRHK 205
L LPY+ ++ED+ +F ++I + +P D GR G Y +F DK + +AL +
Sbjct: 107 LGNLPYDVEREDILEFFSSVKIT--AVRLPQDMGGGRAKGFGYAEFEDKASLIQALDLNN 164
Query: 206 EKIGHRLVTLVMSGAQ 221
E + R V + ++G Q
Sbjct: 165 ESLRGRKVRVDIAGHQ 180
>gi|328783037|ref|XP_394225.4| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Apis mellifera]
Length = 910
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 65/131 (49%), Gaps = 5/131 (3%)
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAE 198
++++ + ++GLP KED+E+ + + + I G G+AYI+F D+ +A
Sbjct: 754 SLEKNKLFVKGLPVSTTKEDLEEIFK-VHGALKEVRIVTYRNGHSKGLAYIEFKDENSAA 812
Query: 199 KALLRHK-EKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVRSTICVLCHPLTP 257
KALL KI +++++ +S P T E P+ L G+ V T P T
Sbjct: 813 KALLATDGMKIADKIISVAISQPPERKKVPATEE-PLLVKSLGGTTVSRT--TFGMPKTL 869
Query: 258 RSVRPRSVRQS 268
S+ PR+V+ +
Sbjct: 870 LSMVPRTVKTA 880
>gi|380818506|gb|AFE81126.1| putative RNA-binding protein 19 [Macaca mulatta]
gi|383412169|gb|AFH29298.1| putative RNA-binding protein 19 [Macaca mulatta]
Length = 960
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 41/71 (57%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
++F P+ PV I ++ + G +G V+FS+ ++ ++AL+ ++ MG RYIE++ E+
Sbjct: 310 VTEFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGRYIEVFREKN 369
Query: 80 TSSKEANGRGT 90
+ + T
Sbjct: 370 VPTTNVAPKNT 380
Score = 37.4 bits (85), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
++L+G P+ +++V +FL L+ P I I + G TG ++ F ++E ++AL
Sbjct: 295 TVKLRGAPFNVTEKNVTEFLAPLK--PVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKC 352
Query: 204 HKEKIGHRLVTL 215
++E +G R + +
Sbjct: 353 NREYMGGRYIEV 364
>gi|355786561|gb|EHH66744.1| hypothetical protein EGM_03792 [Macaca fascicularis]
Length = 960
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 41/71 (57%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
++F P+ PV I ++ + G +G V+FS+ ++ ++AL+ ++ MG RYIE++ E+
Sbjct: 310 VTEFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGRYIEVFREKN 369
Query: 80 TSSKEANGRGT 90
+ + T
Sbjct: 370 VPTTNVAPKNT 380
Score = 37.4 bits (85), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
++L+G P+ +++V +FL L+ P I I + G TG ++ F ++E ++AL
Sbjct: 295 TVKLRGAPFNVTEKNVTEFLAPLK--PVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKC 352
Query: 204 HKEKIGHRLVTL 215
++E +G R + +
Sbjct: 353 NREYMGGRYIEV 364
>gi|355564713|gb|EHH21213.1| hypothetical protein EGK_04225 [Macaca mulatta]
Length = 960
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 41/71 (57%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
++F P+ PV I ++ + G +G V+FS+ ++ ++AL+ ++ MG RYIE++ E+
Sbjct: 310 VTEFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGRYIEVFREKN 369
Query: 80 TSSKEANGRGT 90
+ + T
Sbjct: 370 VPTTNVAPKNT 380
Score = 37.4 bits (85), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
++L+G P+ +++V +FL L+ P I I + G TG ++ F ++E ++AL
Sbjct: 295 TVKLRGAPFNVTEKNVTEFLAPLK--PVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKC 352
Query: 204 HKEKIGHRLVTL 215
++E +G R + +
Sbjct: 353 NREYMGGRYIEV 364
>gi|395730677|ref|XP_003775769.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein F-like [Pongo abelii]
Length = 352
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPN---GITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+RL G + C ED + L +P+ G PH GR +G A+++ +EN + AL
Sbjct: 13 VRLHGPSWPCSVEDAQDVLSNC-TMPHRAAGEFHPHHRXGRQSGEAFVELGXEENIKMAL 71
Query: 202 LRHKEKIGHRLVTLVMS 218
+ +E +GHR + + S
Sbjct: 72 EKDRESMGHRRIAVFKS 88
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
Query: 14 ITYCLLCSQFFKPIVPVNILLLTDDAG---RSSGEADVEFSSVDDAQRALQRHKSNMGDR 70
+ Y S + P N+ + + G R +G+ADV+F++ ++A A R + +M R
Sbjct: 239 LPYKATKSDIYNLFSPPNLARVHTEMGPHERVTGKADVKFATQEEAVAATSRDRVSMWHR 298
Query: 71 YIELYMEEGT-------SSKEANGRGTGGFGGVKS 98
Y+EL++ T SS+ G G + G+KS
Sbjct: 299 YMELFLNLTTGASNGAYSSRXMRGMGLTTYSGLKS 333
>gi|40788328|dbj|BAA31657.2| KIAA0682 protein [Homo sapiens]
Length = 973
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 41/69 (59%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+F P+ PV I ++ + G +G V+FS+ ++ ++AL+ ++ MG RYIE++ E+
Sbjct: 325 EFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGRYIEVFREKNVP 384
Query: 82 SKEANGRGT 90
+ + + T
Sbjct: 385 TTKGAPKNT 393
>gi|226497574|ref|NP_057280.2| probable RNA-binding protein 19 [Homo sapiens]
gi|226497654|ref|NP_001140170.1| probable RNA-binding protein 19 [Homo sapiens]
gi|226497734|ref|NP_001140171.1| probable RNA-binding protein 19 [Homo sapiens]
gi|308153566|sp|Q9Y4C8.3|RBM19_HUMAN RecName: Full=Probable RNA-binding protein 19; AltName:
Full=RNA-binding motif protein 19
Length = 960
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 41/69 (59%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+F P+ PV I ++ + G +G V+FS+ ++ ++AL+ ++ MG RYIE++ E+
Sbjct: 312 EFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGRYIEVFREKNVP 371
Query: 82 SKEANGRGT 90
+ + + T
Sbjct: 372 TTKGAPKNT 380
>gi|168278697|dbj|BAG11228.1| RNA binding motif protein 19 [synthetic construct]
Length = 960
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 41/69 (59%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+F P+ PV I ++ + G +G V+FS+ ++ ++AL+ ++ MG RYIE++ E+
Sbjct: 312 EFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGRYIEVFREKNVP 371
Query: 82 SKEANGRGT 90
+ + + T
Sbjct: 372 TTKGAPKNT 380
>gi|158256324|dbj|BAF84133.1| unnamed protein product [Homo sapiens]
gi|189054403|dbj|BAG37176.1| unnamed protein product [Homo sapiens]
Length = 960
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 41/69 (59%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+F P+ PV I ++ + G +G V+FS+ ++ ++AL+ ++ MG RYIE++ E+
Sbjct: 312 EFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGRYIEVFREKNVP 371
Query: 82 SKEANGRGT 90
+ + + T
Sbjct: 372 TTKGAPKNT 380
>gi|426374260|ref|XP_004053996.1| PREDICTED: probable RNA-binding protein 19 [Gorilla gorilla
gorilla]
Length = 960
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 41/69 (59%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+F P+ PV I ++ + G +G V+FS+ ++ ++AL+ ++ MG RYIE++ E+
Sbjct: 312 EFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGRYIEVFREKNVP 371
Query: 82 SKEANGRGT 90
+ + + T
Sbjct: 372 TTKGAPKNT 380
>gi|13279134|gb|AAH04289.1| RBM19 protein [Homo sapiens]
gi|13544005|gb|AAH06137.1| RBM19 protein [Homo sapiens]
gi|190689379|gb|ACE86464.1| RNA binding motif protein 19 protein [synthetic construct]
gi|190690741|gb|ACE87145.1| RNA binding motif protein 19 protein [synthetic construct]
Length = 960
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 41/69 (59%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+F P+ PV I ++ + G +G V+FS+ ++ ++AL+ ++ MG RYIE++ E+
Sbjct: 312 EFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGRYIEVFREKNVP 371
Query: 82 SKEANGRGT 90
+ + + T
Sbjct: 372 TTKGAPKNT 380
>gi|5912081|emb|CAB55987.1| hypothetical protein [Homo sapiens]
Length = 960
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 41/69 (59%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+F P+ PV I ++ + G +G V+FS+ ++ ++AL+ ++ MG RYIE++ E+
Sbjct: 312 EFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGRYIEVFREKNVP 371
Query: 82 SKEANGRGT 90
+ + + T
Sbjct: 372 TTKGAPKNT 380
>gi|114647138|ref|XP_522578.2| PREDICTED: probable RNA-binding protein 19 [Pan troglodytes]
gi|410216396|gb|JAA05417.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410216398|gb|JAA05418.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410263956|gb|JAA19944.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410263958|gb|JAA19945.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410292596|gb|JAA24898.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410292598|gb|JAA24899.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410339181|gb|JAA38537.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410339183|gb|JAA38538.1| RNA binding motif protein 19 [Pan troglodytes]
Length = 961
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 41/69 (59%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+F P+ PV I ++ + G +G V+FS+ ++ ++AL+ ++ MG RYIE++ E+
Sbjct: 312 EFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGRYIEVFREKNVP 371
Query: 82 SKEANGRGT 90
+ + + T
Sbjct: 372 TTKGAPKNT 380
>gi|397525018|ref|XP_003832476.1| PREDICTED: probable RNA-binding protein 19 [Pan paniscus]
Length = 961
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 41/69 (59%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+F P+ PV I ++ + G +G V+FS+ ++ ++AL+ ++ MG RYIE++ E+
Sbjct: 312 EFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGRYIEVFREKNVP 371
Query: 82 SKEANGRGT 90
+ + + T
Sbjct: 372 TTKGAPKNT 380
>gi|397502356|ref|XP_003821827.1| PREDICTED: epithelial splicing regulatory protein 1 [Pan paniscus]
Length = 268
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 144 CMRLQGLPYECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
C+RL+GLPY ED+ FL +I +G+ + ++ GR +G A+IQ + A A
Sbjct: 37 CIRLRGLPYAATIEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAA 96
Query: 202 LR-HKEKIGHRLVTLVMSGAQ 221
+ HK+ + R V + A+
Sbjct: 97 QKCHKKNMKDRYVEVFQCSAE 117
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELYMEEGTSSKEANGRGT 90
+ ++ + GR SG+A ++ S D A A Q+ HK NM DRY+E++ S++E N
Sbjct: 68 VHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQ---CSAEEMNFVLM 124
Query: 91 GG 92
GG
Sbjct: 125 GG 126
>gi|350396590|ref|XP_003484604.1| PREDICTED: hypothetical protein LOC100745803 [Bombus impatiens]
Length = 885
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 87/225 (38%), Gaps = 34/225 (15%)
Query: 89 GTGGFGGVKSTPYGVGIFCISQFLAKWMR----------RAKRSEMDWALKRQGAVLS-- 136
GT +G S Y GI + FL+K ++ S+ ++ RQG S
Sbjct: 374 GTDMYGSNGSLNYRPGIRPSNPFLSKVQELEGRRNPHAFQSNNSQFNFDNDRQGNRSSTN 433
Query: 137 --------GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAY 188
S+ C+ ++ +P DV +G+ I +G+ + +D G G+AY
Sbjct: 434 SSRFSNENKSSGGGHCVEVRNMPLSATYNDVRHAFQGIYIRKDGLKLINDNHGNRVGIAY 493
Query: 189 IQFVDKENAEKAL-----LRHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSP 243
++F E E AL +R E L + A SP E R +
Sbjct: 494 VKFSKAEGKELALGTTRFVRGSEVEVLHLDESIFDKAVDSYSP----EKERDRGEDGIED 549
Query: 244 VRSTICVLCHPLTPRSVRPRSVRQSEHEWWALARLGSFLISRTHQ 288
VRS+ C+L L P + + + H+W ++ I+ T +
Sbjct: 550 VRSSTCILLTDL-PSFTKEMDIAKLFHDW----KINDLFITSTKE 589
>gi|170057361|ref|XP_001864450.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
gi|167876772|gb|EDS40155.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
Length = 1174
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 43/86 (50%)
Query: 130 RQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYI 189
RQ + + +D +++ L ++ +F G I NGI + +D G+ TGVAY+
Sbjct: 337 RQQSSIYDDEMDGQSIKISNLETATGYGEIRRFFSGQAISSNGIKMINDPNGKRTGVAYV 396
Query: 190 QFVDKENAEKALLRHKEKIGHRLVTL 215
+F+ K+ A+ R+ + + V +
Sbjct: 397 RFLRKDAKRYAMSRNGQNMRRSAVKV 422
>gi|403281594|ref|XP_003932266.1| PREDICTED: probable RNA-binding protein 19 [Saimiri boliviensis
boliviensis]
Length = 960
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 37/58 (63%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
+F P+ PV + ++ + G +G V+FS+ ++ ++AL+ ++ MG RYIE++ E+
Sbjct: 312 EFLAPLKPVAVRIVRNAHGNKTGYIFVDFSNEEEVKKALKCNREYMGGRYIEVFREKN 369
>gi|158286040|ref|XP_001688002.1| AGAP007221-PA [Anopheles gambiae str. PEST]
gi|157020278|gb|EDO64651.1| AGAP007221-PA [Anopheles gambiae str. PEST]
Length = 1197
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQ LP DV F +GL I G+ I G G A+I F E+A +A+
Sbjct: 3 VIIRLQNLPLAANASDVRSFFKGLSIPDGGVHI----VGGALGDAFIAFSTDEDARQAMA 58
Query: 203 RHKEKIGHRLVTLVMS 218
+ I + ++L++S
Sbjct: 59 LNGGCIKNEPISLLLS 74
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 136 SGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
SG+ +++ L ++ +F + I GI + +D GR TG AYIQF+ KE
Sbjct: 519 SGAITSDYAVKISNLESVTGYGEIRRFFKSHLITTQGIKMINDQNGRRTGTAYIQFLRKE 578
Query: 196 NAEKALLR 203
+ AL R
Sbjct: 579 GKKFALSR 586
>gi|390596324|gb|EIN05726.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 614
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 4/108 (3%)
Query: 150 LPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEK-I 208
L ++ ++EDV+ E +V +T+ GR G A+++F E+A +A+ RH+E +
Sbjct: 320 LSFQAEEEDVQDLFEDFGVV-ESVTLGRGKDGRMAGFAHVEFKSIEDALRAMERHQESPL 378
Query: 209 GHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVRSTICVLCHPLT 256
H TL + A P T TP + +P +T+ + P
Sbjct: 379 AHAERTLTLDWAHRPSWSPQT--TPDAHYMRNANPPTNTLFLGNLPFN 424
>gi|212537129|ref|XP_002148720.1| ribonucleoprotein, putative [Talaromyces marneffei ATCC 18224]
gi|210068462|gb|EEA22553.1| ribonucleoprotein, putative [Talaromyces marneffei ATCC 18224]
Length = 326
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 149 GLPYECKKEDVEKFLEGLEIVPNGITIPHD-YAGRCTGVAYIQFVDKENAEKAL--LRHK 205
+PY K+EDVE EG E I I D + GR +++ KE A++A+ L K
Sbjct: 86 NMPYTAKREDVETIFEGGEYSIERIDISIDPFTGRNPSYCFVELATKEQADRAMVELDGK 145
Query: 206 EKIGH--RLVTLVMSGAQWFLSPPLTNETPISRL-DLTGSP 243
+ G R+ V AQ +S + ++ SRL D GSP
Sbjct: 146 DLQGRPIRIKPGVAKSAQDRVSSTRSPQSSPSRLNDNAGSP 186
>gi|383853070|ref|XP_003702047.1| PREDICTED: uncharacterized protein LOC100882770 [Megachile
rotundata]
Length = 886
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 81/209 (38%), Gaps = 29/209 (13%)
Query: 89 GTGGFGGVKSTPYGVGIFCISQFLAKWMR----------RAKRSEMDWALKRQGA----- 133
GT +G S Y GI + F++K +A S+ + RQ +
Sbjct: 374 GTDMYGSNGSINYRPGIRPNNPFMSKVQELEGRRNPHAFQANSSQFGFDNDRQASRAATG 433
Query: 134 -------VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGV 186
SGS C + ++ +P DV +G+ I +G+ + +D G G+
Sbjct: 434 NSRFSNESKSGSGTGHC-VEVRNMPLSATYNDVRHAFQGIYIRKDGLKLINDNHGNRVGI 492
Query: 187 AYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGS---P 243
AY++F E E AL + G + L + + + + +P D +
Sbjct: 493 AYVKFSKAEGKELALSTPRYVRGSEVEVLHLD--ESIFDKAVDSYSPEKERDRSEDGVED 550
Query: 244 VRSTICVLCHPLTPRSVRPRSVRQSEHEW 272
VRS+ C+L L P + + + H+W
Sbjct: 551 VRSSACILLTDL-PSFTKEMDIAKLFHDW 578
>gi|357138034|ref|XP_003570603.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 216
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 65/157 (41%), Gaps = 33/157 (21%)
Query: 90 TGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKR----------QGAVLSGSA 139
TGG KS F + Q L + RR K E + A R QG + S
Sbjct: 28 TGGDDAAKS-------FSLMQELDEMKRRLKEMEEEAAALRDMQAKVAKEMQGGDANAST 80
Query: 140 ------VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVD 193
VD + + + Y C E+V++ + V N +TI D G+ G AY++F++
Sbjct: 81 AEAKEQVDARSVYVGNVDYACTPEEVQQHFQACGTV-NRVTILTDKFGQPKGFAYVEFLE 139
Query: 194 KENAEKALLRHKEKIGHRLVTLVMSGAQWFLSPPLTN 230
+E ++AL L + G Q +SP TN
Sbjct: 140 QEAVQEAL---------NLNESELHGRQIKVSPKRTN 167
>gi|195439120|ref|XP_002067479.1| GK16446 [Drosophila willistoni]
gi|194163564|gb|EDW78465.1| GK16446 [Drosophila willistoni]
Length = 929
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 64/138 (46%), Gaps = 16/138 (11%)
Query: 110 QFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV 169
+++ M S+ A+ + A S ++ +++ +PY K+++V KF + L+
Sbjct: 227 EYMKSLMATPSTSKTSTAVTTKKAKPDKSNLELFTIKIHNVPYNTKRQEVLKFFKPLK-- 284
Query: 170 PNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGAQWFLSPPLT 229
P + +P G+ G Y+ F +++ KA+L++K + G Q F S T
Sbjct: 285 PYSVRLP----GKVHGFCYVGFKTEKDMAKAMLKNKS---------FIKGKQVFFS-DFT 330
Query: 230 NETPISRLDLTGSPVRST 247
+ +++ + G + +T
Sbjct: 331 EKNKVTKANKEGRTITTT 348
>gi|406700293|gb|EKD03465.1| hypothetical protein A1Q2_02183 [Trichosporon asahii var. asahii
CBS 8904]
Length = 445
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 3 FSFYVIDILIHITYCLLCSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQR 62
F+ +V ++ + + FF + P+++ L+ D G++ G VEF S DD + AL
Sbjct: 65 FTAFVGNLTFEVQDDEV-RDFFAELKPISVRLVKDSEGKAKGFGYVEFGSRDDLKNALDL 123
Query: 63 HKSNMGDRYIELYMEEGTS 81
N+G R + + + E S
Sbjct: 124 TGQNLGGRTVRINVAEAPS 142
>gi|355694925|gb|AER99832.1| heteroproteinous nuclear ribonucleoprotein H3 [Mustela putorius
furo]
Length = 108
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSN 66
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K+N
Sbjct: 62 IANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNN 108
>gi|118778307|ref|XP_308564.3| AGAP007221-PB [Anopheles gambiae str. PEST]
gi|116132320|gb|EAA04285.4| AGAP007221-PB [Anopheles gambiae str. PEST]
Length = 787
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RLQ LP DV F +GL I G+ I G G A+I F E+A +A+
Sbjct: 3 VIIRLQNLPLAANASDVRSFFKGLSIPDGGVHI----VGGALGDAFIAFSTDEDARQAMA 58
Query: 203 RHKEKIGHRLVTLVMS 218
+ I + ++L++S
Sbjct: 59 LNGGCIKNEPISLLLS 74
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 136 SGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
SG+ +++ L ++ +F + I GI + +D GR TG AYIQF+ KE
Sbjct: 353 SGAITSDYAVKISNLESVTGYGEIRRFFKSHLITTQGIKMINDQNGRRTGTAYIQFLRKE 412
Query: 196 NAEKALLR 203
+ AL R
Sbjct: 413 GKKFALSR 420
>gi|270009865|gb|EFA06313.1| hypothetical protein TcasGA2_TC009182 [Tribolium castaneum]
Length = 748
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 59/120 (49%), Gaps = 13/120 (10%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHK- 205
++GLPY+ +E++E + D G+ G+AY++F D +A+KA+ +
Sbjct: 622 VKGLPYDKSQEEIEAIFRPFGAKTVRLVCRRD--GKPKGLAYVEFEDDASAKKAMEKTDG 679
Query: 206 EKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVRSTICVLCHPLTPRSVRPRSV 265
+G +++ +S +PP+ T +++ +P R L P+ PRS++ +S
Sbjct: 680 MTVGDFTISVAIS------APPVKKPTTVAK----STPTRHARSRLQVPMLPRSLQVKSA 729
>gi|340716874|ref|XP_003396916.1| PREDICTED: hypothetical protein LOC100648364 [Bombus terrestris]
Length = 885
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 86/225 (38%), Gaps = 34/225 (15%)
Query: 89 GTGGFGGVKSTPYGVGIFCISQFLAKWMR----------RAKRSEMDWALKRQGAVLS-- 136
GT +G S Y GI + FL+K ++ S+ ++ RQG S
Sbjct: 374 GTDMYGSNGSLNYRPGIRPNNPFLSKVQELEGRRNPHAFQSNSSQFNFDNDRQGNRSSTN 433
Query: 137 --------GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAY 188
S C+ ++ +P DV +G+ I +G+ + +D G G+AY
Sbjct: 434 SSRFSNENKSGGGGHCVEVRNMPLSATYNDVRHAFQGIYIRKDGLKLINDNHGNRVGIAY 493
Query: 189 IQFVDKENAEKAL-----LRHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSP 243
++F E E AL +R E L + A SP E R +
Sbjct: 494 VKFSKAEGKELALGTTRFVRGSEVEVLHLDESIFDKAVDSYSP----EKERDRGEDGIED 549
Query: 244 VRSTICVLCHPLTPRSVRPRSVRQSEHEWWALARLGSFLISRTHQ 288
VRS+ C+L L P + + + H+W ++ I+ T +
Sbjct: 550 VRSSACILLTDL-PSFTKEMDIAKLFHDW----KINDLFITSTKE 589
>gi|442749963|gb|JAA67141.1| Putative rna-binding protein rrm superfamily [Ixodes ricinus]
Length = 863
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 43/70 (61%), Gaps = 7/70 (10%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+++ GLPY+CKK+ ++ F + +++ + +P R G+AY+ F ++ ++AL +
Sbjct: 229 SLKVSGLPYKCKKKQIKDFFKPVKVA--SLRVP----PRIKGIAYLGFKTEKEMKQALNK 282
Query: 204 HKEKI-GHRL 212
H+ + GH+L
Sbjct: 283 HRSFMAGHKL 292
>gi|91086239|ref|XP_972538.1| PREDICTED: similar to Squamous cell carcinoma antigen recognized by
T-cells 3 (SART-3) (mSART-3) (Tumor-rejection antigen
SART3) [Tribolium castaneum]
Length = 758
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 59/120 (49%), Gaps = 13/120 (10%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHK- 205
++GLPY+ +E++E + D G+ G+AY++F D +A+KA+ +
Sbjct: 632 VKGLPYDKSQEEIEAIFRPFGAKTVRLVCRRD--GKPKGLAYVEFEDDASAKKAMEKTDG 689
Query: 206 EKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVRSTICVLCHPLTPRSVRPRSV 265
+G +++ +S +PP+ T +++ +P R L P+ PRS++ +S
Sbjct: 690 MTVGDFTISVAIS------APPVKKPTTVAK----STPTRHARSRLQVPMLPRSLQVKSA 739
>gi|298710382|emb|CBJ25446.1| G-rich sequence factor 1 [Ectocarpus siliculosus]
Length = 503
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 11/113 (9%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIP-----HDYAGRCTGVAYIQFVDKENAE 198
+++ GLP+ E++E++ E P +T+P AG+ G AY+ F +E+
Sbjct: 122 LIQVDGLPFTMATEELEQWFEEAGCSPPKVTVPLWPERSIRAGQNKGKAYLHFSGEEDVR 181
Query: 199 KALLRHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVRSTICVL 251
KAL IG R + + L+ PL I+ L G P + +
Sbjct: 182 KALSLSGRSIGERWINISR------LAQPLEEACTITIKGLQGFPESEVVAIF 228
>gi|291232095|ref|XP_002735981.1| PREDICTED: RBD (RNA binding domain) protein family member
(rbd-1)-like [Saccoglossus kowalevskii]
Length = 861
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
S+FF PI V I ++ + G+ G A VE + +D + A+ RHK M R IE+ + E
Sbjct: 291 ISEFFAPIEVVAIHIVKNKNGKQLGFARVELKNENDLKEAMTRHKDYMRGRCIEIALYEA 350
Query: 80 TSSKEANGRGTG 91
+ + TG
Sbjct: 351 VDDFDPSKVKTG 362
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ + ++G+P+ C ++++ +F +E+V I I + G+ G A ++ ++ + ++A+
Sbjct: 274 EFVIEMRGIPFYCSEKEISEFFAPIEVV--AIHIVKNKNGKQLGFARVELKNENDLKEAM 331
Query: 202 LRHKEKIGHRLVTLVMSGA 220
RHK+ + R + + + A
Sbjct: 332 TRHKDYMRGRCIEIALYEA 350
>gi|388500100|gb|AFK38116.1| unknown [Medicago truncatula]
Length = 199
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
VD + + + Y C EDV++ + V N +TI D G+ G AY++FV+ E A++
Sbjct: 65 VDARSIFVGNVDYACTPEDVQQHFQSCGTV-NRVTIRTDKFGQPKGYAYVEFVEVEAAQE 123
Query: 200 ALLRHKEKIGHRLVTLV 216
ALL ++ ++ R + +
Sbjct: 124 ALLLNESELHGRQLKVT 140
>gi|427792771|gb|JAA61837.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 687
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 42/70 (60%), Gaps = 7/70 (10%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
++++GLPY CKK+ ++ F + ++ + +P + G+AY+ F +++ ++AL +
Sbjct: 204 TLKVKGLPYNCKKKQIKDFFKPAKVA--SLRLP----PKVRGIAYLGFKKEQDMKQALNK 257
Query: 204 HKEKI-GHRL 212
H + GHRL
Sbjct: 258 HHSFMAGHRL 267
>gi|393212445|gb|EJC97945.1| hypothetical protein FOMMEDRAFT_97432 [Fomitiporia mediterranea
MF3/22]
Length = 1017
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 14/158 (8%)
Query: 22 QFFKPIVPV-NILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG- 79
+ FK PV +I + DD G G A VEF AQRALQ + ++ +R I + M +
Sbjct: 790 KLFKTFGPVKDIRVTKDDTGLCKGVAFVEFEDEPSAQRALQANNHDVKNRRIAVTMSDSR 849
Query: 80 TSSKEANGRGTGGFG----------GVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALK 129
++ N + G G +K P G + Q L K + KR E+ L+
Sbjct: 850 VRARHKNEQTASGLGRRSDVRSRSVRIKGLPPGTQEGLLQQALEKVV-PVKRLEVFQDLQ 908
Query: 130 RQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLE 167
A L SA D + L P + ++ F E LE
Sbjct: 909 EATAELE-SAADAGKLLLAKEPLQFNGVTLDIFEEPLE 945
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 136 SGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ + D + + GL ++D++K + V + I + D G C GVA+++F D+
Sbjct: 765 TDAGADDREVYVAGLSKFVIRDDLKKLFKTFGPVKD-IRVTKDDTGLCKGVAFVEFEDEP 823
Query: 196 NAEKALLRHKEKIGHRLVTLVMSGAQ 221
+A++AL + + +R + + MS ++
Sbjct: 824 SAQRALQANNHDVKNRRIAVTMSDSR 849
>gi|427792715|gb|JAA61809.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 841
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 42/70 (60%), Gaps = 7/70 (10%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
++++GLPY CKK+ ++ F + ++ + +P + G+AY+ F +++ ++AL +
Sbjct: 204 TLKVKGLPYNCKKKQIKDFFKPAKVA--SLRLP----PKVRGIAYLGFKKEQDMKQALNK 257
Query: 204 HKEKI-GHRL 212
H + GHRL
Sbjct: 258 HHSFMAGHRL 267
>gi|159476702|ref|XP_001696450.1| hypothetical protein CHLREDRAFT_51996 [Chlamydomonas reinhardtii]
gi|158282675|gb|EDP08427.1| predicted protein [Chlamydomonas reinhardtii]
Length = 91
Score = 40.4 bits (93), Expect = 0.88, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGG 92
GRS G A V+F S D AQ+A + S +G R I++ + + + +E+ G G
Sbjct: 39 GRSKGYAHVDFESADQAQKATSKAGSELGGRNIKVEVAQARAPRESYGAAGNG 91
>gi|328790346|ref|XP_003251410.1| PREDICTED: hypothetical protein LOC100578631 [Apis mellifera]
Length = 878
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 62/150 (41%), Gaps = 14/150 (9%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL-- 201
C+ ++ +P DV +G+ I +G+ + +D G G+AY++F E E AL
Sbjct: 442 CVEVRNMPLSATYNDVRHAFQGIYIRKDGLKLINDNHGNRVGIAYVKFSKAEGKELALGT 501
Query: 202 ---LRHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVRSTICVLCHPLTPR 258
+R E L + A SP E R + VRS+ C+L L P
Sbjct: 502 TRFVRGSEVEVLHLDESIFDKAVDSYSP----EKERDRGEDGMDDVRSSACILLTDL-PT 556
Query: 259 SVRPRSVRQSEHEWWALARLGSFLISRTHQ 288
+ + + H+W ++ I+ T +
Sbjct: 557 FTKEMDIAKLFHDW----KINDLFITSTKE 582
>gi|410923148|ref|XP_003975044.1| PREDICTED: probable RNA-binding protein 19-like [Takifugu rubripes]
Length = 941
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 37/185 (20%), Positives = 75/185 (40%), Gaps = 32/185 (17%)
Query: 18 LLCSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
L +F P+ P I + +D+G +G V+ S + + AL+++K +G RYIE++
Sbjct: 318 LQIREFMTPLKPAAIRIGKNDSGNRTGYVYVDLHSAEQVEAALKKNKDYIGGRYIEVFRV 377
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
+ + AK +R + + ++ +
Sbjct: 378 DNSEK------------------------------AKRDKRDREVDRNFTRTLKEDEEEE 407
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCT-GVAYIQFVDKEN 196
+ + ++ LPY C +E++++ + + P D + T G A+I ++ EN
Sbjct: 408 DVAESGRLFVRNLPYTCTEEELKELFAKHGPLSE-LHFPIDSLTKKTKGFAFITYMIPEN 466
Query: 197 AEKAL 201
A AL
Sbjct: 467 AVAAL 471
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
++L+G+P+ K+ + +F+ L+ P I I + +G TG Y+ E E AL +
Sbjct: 305 TVKLRGVPFNVKELQIREFMTPLK--PAAIRIGKNDSGNRTGYVYVDLHSAEQVEAALKK 362
Query: 204 HKEKIGHRLV 213
+K+ IG R +
Sbjct: 363 NKDYIGGRYI 372
>gi|332250675|ref|XP_003274476.1| PREDICTED: probable RNA-binding protein 19 [Nomascus leucogenys]
Length = 997
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 40/69 (57%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+F P+ PV I ++ + G +G +FS+ ++ ++AL+ ++ MG RYIE++ E+
Sbjct: 349 EFLAPLKPVAIRIVRNAHGNKTGYIFADFSNEEEVKQALKCNREYMGGRYIEVFREKNIP 408
Query: 82 SKEANGRGT 90
+ + + T
Sbjct: 409 TTKGAPKNT 417
>gi|312384422|gb|EFR29154.1| hypothetical protein AND_02122 [Anopheles darlingi]
Length = 927
Score = 40.4 bits (93), Expect = 0.99, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 34/72 (47%)
Query: 133 AVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFV 192
+V +G +RL L D+ +F I GI + +D GR TGVA++QF
Sbjct: 657 SVYTGRNTSDYAVRLANLDSLTGYGDIRRFFHSHTIATQGIKMINDEQGRRTGVAFVQFA 716
Query: 193 DKENAEKALLRH 204
K+ AL R+
Sbjct: 717 RKDGKTNALHRN 728
Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RLQ LP DV FL GL I G+ I G G A+I F + E+A +A+ R
Sbjct: 17 IRLQNLPLAANASDVRAFLAGLTIPDGGVHI----VGGERGDAFIAFSNDEDARQAIFRS 72
Query: 205 KEKIGHRLVTLVMS 218
+ V+L +S
Sbjct: 73 GRPVKGVPVSLQLS 86
>gi|168035835|ref|XP_001770414.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678291|gb|EDQ64751.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 776
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 40/79 (50%)
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
D+C L + +E +ED+++F V + R G+AY+ F D+E+
Sbjct: 603 TDECTAFLSNVAFEVTEEDLKEFFSPSSRVKEVRILRERGTARPRGLAYVDFEDEESLTA 662
Query: 200 ALLRHKEKIGHRLVTLVMS 218
A+ ++KE++ R +++ S
Sbjct: 663 AIAKNKEELKGRQLSIARS 681
>gi|357616005|gb|EHJ69949.1| hypothetical protein KGM_10362 [Danaus plexippus]
Length = 888
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+++ GLP++CKK+D+++F + L VP I +P + G Y+ F ++ KAL +
Sbjct: 248 VKITGLPFKCKKKDIKEFFKPL--VPFSIRLPLGKGKKLAGFCYVGFRTEKELNKALNKD 305
Query: 205 KEKIG-HRL 212
K I HR+
Sbjct: 306 KLFIANHRI 314
>gi|116786211|gb|ABK24023.1| unknown [Picea sitchensis]
Length = 302
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%)
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENA 197
S D+C + + G+PY ++D+ F EG V + +G+ G+A I F K A
Sbjct: 71 SNYDECKVYVGGIPYYSNEDDIRSFFEGCGTVTEVDCMTFPDSGKFRGIALISFKTKAAA 130
Query: 198 EKALLRHKEKIGHRLVTL 215
+AL +G R + +
Sbjct: 131 TRALALDGADMGGRFLKI 148
>gi|49903191|gb|AAH76429.1| Rbm19 protein, partial [Danio rerio]
Length = 275
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
+F P+ PV I + GR+SG V+ S + +RAL+ K MG RYIE++
Sbjct: 199 VKEFMMPLKPVAIRFAKNSDGRNSGYVYVDLRSEAEVERALRLDKDYMGGRYIEVF 254
>gi|255573806|ref|XP_002527822.1| Squamous cell carcinoma antigen recognized by T-cells, putative
[Ricinus communis]
gi|223532746|gb|EEF34525.1| Squamous cell carcinoma antigen recognized by T-cells, putative
[Ricinus communis]
Length = 852
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
DQC L L + ED+ KF + V + + Y G+ G+AY+ F D E+
Sbjct: 673 TDQCTAFLSNLHLKANYEDLRKFFSDVGGVVSIRILLDKYTGKSRGLAYVDFSDDEHLAA 732
Query: 200 ALLRHKEK-IGHRL 212
A+ ++K+ +G RL
Sbjct: 733 AIAKNKQMLLGKRL 746
>gi|428170953|gb|EKX39874.1| hypothetical protein GUITHDRAFT_154318 [Guillardia theta CCMP2712]
Length = 270
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 120 KRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDY 179
KR E + A K GA A D+ + L GLP++ ++D++K E + N I +P +
Sbjct: 7 KRKEPEKAKKEDGA-----AGDKRRVFLGGLPFKATEKDIKKMFESCGAIEN-IELPMNA 60
Query: 180 AGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTL 215
R G ++ F D ++ KA+ +++ R V +
Sbjct: 61 DSRPAGFGFLTFKDADSVAKAVAMDGQELMGRWVKV 96
>gi|320580999|gb|EFW95221.1| RNA-binding protein, putative [Ogataea parapolymorpha DL-1]
Length = 343
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 13/98 (13%)
Query: 149 GLPYECKKEDVEKFL----EGLE--IVPNGIT---IPHDYAGRCTGVAYIQFVDKENAEK 199
L Y+ +ED+ FL E +E I N IT IP A + G AYI F +E+ E
Sbjct: 73 NLAYDTTREDIISFLVRKSEEMEPAITENDITRVNIPKKTAHKIKGFAYIDFKSQEHVET 132
Query: 200 AL-LRHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISR 236
A+ L +E G R L++ A F P E P+S+
Sbjct: 133 AIALSEQELNGRR---LLIKDANSFEGRPQKAEEPLSK 167
>gi|345479719|ref|XP_001600826.2| PREDICTED: epithelial splicing regulatory protein 2-like [Nasonia
vitripennis]
Length = 746
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
C+ ++ +P DV + +G+ I +GI + D G G+AY++F + E+ E+AL
Sbjct: 286 CIEIRNMPMSASYGDVRQAFQGIYIRNDGIKLITDTHGNRVGIAYVKFGNFESKEQAL 343
>gi|383858361|ref|XP_003704670.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Megachile rotundata]
Length = 905
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 66/129 (51%), Gaps = 5/129 (3%)
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAE 198
++++ + ++GLP KE++E+ + + + I G G+AY+++ D+ +A
Sbjct: 749 SLEKNKLFVKGLPVTTTKEELEEIFK-VHGTLKEVRIVTYRNGHSKGLAYVEYDDENSAA 807
Query: 199 KALLRHK-EKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVRSTICVLCHPLTP 257
KALL K+ +++++ +S P+T ET + + L G+ V T P T
Sbjct: 808 KALLATDGMKVSDKVISVAISQPPERKKNPVTEETTLVK-SLGGTAVSRT--TFGMPKTL 864
Query: 258 RSVRPRSVR 266
S+ PR+V+
Sbjct: 865 LSMVPRTVK 873
>gi|380019192|ref|XP_003693498.1| PREDICTED: uncharacterized protein LOC100871735 [Apis florea]
Length = 879
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 62/150 (41%), Gaps = 14/150 (9%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL-- 201
C+ ++ +P DV +G+ I +G+ + +D G G+AY++F E E AL
Sbjct: 443 CVEVRNMPLSATYNDVRHAFQGIYIRKDGLKLINDNHGNRVGIAYVKFSKAEGKELALGT 502
Query: 202 ---LRHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPVRSTICVLCHPLTPR 258
+R E L + A SP + +D VRS+ C+L L P
Sbjct: 503 TRFVRGSEVEVLHLDESIFDKAVDSYSPEKERDRGEDGID----DVRSSACILLTDL-PS 557
Query: 259 SVRPRSVRQSEHEWWALARLGSFLISRTHQ 288
+ + + H+W ++ I+ T +
Sbjct: 558 FTKEMDIAKLFHDW----KINDLFITSTKE 583
>gi|159163875|pdb|2CQP|A Chain A, Solution Structure Of The Rna Binding Domain Of
Rna-Binding Protein 12
Length = 98
Score = 40.0 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 18 IKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDL 77
Query: 205 KEK-IGHRLVTLVM 217
++ IG R V LV+
Sbjct: 78 NDRPIGSRKVKLVL 91
>gi|327269587|ref|XP_003219575.1| PREDICTED: RNA-binding protein 12B-like [Anolis carolinensis]
Length = 730
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 135 LSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDK 194
+SGS+ ++L+ +P+ ++ F G +I+P ++I H+ G +G A I V+
Sbjct: 646 VSGSSNCFTLIKLKNIPFRATPNEILDFFHGYKIIPESLSIQHNQYGLPSGEAVIALVNY 705
Query: 195 ENAEKALLRHKEK-IGHRLVTLVM 217
A + ++ IG R + L +
Sbjct: 706 NEAMAVVNELNDRPIGQRKIRLTL 729
>gi|307102453|gb|EFN50727.1| hypothetical protein CHLNCDRAFT_142539 [Chlorella variabilis]
Length = 515
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 7/109 (6%)
Query: 101 YGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVE 160
+G I + + M++A + E D AV++ +RL+GLP + DV
Sbjct: 180 HGTTITMAAGQFSLGMQKATKGEWD-------AVVAAEQGRDGIVRLKGLPTKATTGDVM 232
Query: 161 KFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIG 209
FL+G I G+ + R + +A + F E A +AL + ++ G
Sbjct: 233 AFLDGYRIKLGGVHVQPFSENRHSKIALVVFETAEEATRALEKDRQPFG 281
>gi|221129839|ref|XP_002156393.1| PREDICTED: epithelial splicing regulatory protein 2-like [Hydra
magnipapillata]
Length = 489
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 96/261 (36%), Gaps = 50/261 (19%)
Query: 5 FYVIDILIHITYCLLCSQFFKPIVPVNILLLTDDAGR----SSGEADVEFSSVDDAQRAL 60
F I L + + FF+P++ +I L+ + G+ +G A VEF S DA+ L
Sbjct: 226 FVFIGELPYNATEVDIQDFFRPVLTRDIFLIRNKVGKYIGKPNGNAVVEFFSESDAREVL 285
Query: 61 QRHKSNMGDRYI---ELYMEEGTSSKEANGRGT---------------GGFGGVKSTPY- 101
+ G R EE S+ E N + S P
Sbjct: 286 KCDGKRFGQRNAVVQRARKEEIISAIEENQMHSLNRPLPPPGNIVPDISNLAAANSNPQV 345
Query: 102 ---------------GVGIFCISQFLAKWMRRAKRSEMDWALKRQ-----GAVLSGSAVD 141
G + M R+ R + +R+ G V S + +D
Sbjct: 346 QALLTLLTATVNSLAGSAFPMVPPSDVPDMGRSFRGGLPERRRRRSDPIIGRVASSANID 405
Query: 142 QCCMRL------QGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+++ + LPYE +++ +F ++ + + I + GRC+G A I F
Sbjct: 406 VNDIKMGRAVGIRNLPYEVTPDEILQFFRNFPVIADSVRIHYLEDGRCSGDAIISFRGSR 465
Query: 196 NAEKALLR-HKEKIGHRLVTL 215
+A A+ +++ +G R V L
Sbjct: 466 DARDAVQALNRKNLGRRKVEL 486
>gi|345790896|ref|XP_543410.3| PREDICTED: probable RNA-binding protein 19 [Canis lupus familiaris]
Length = 970
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 36/58 (62%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
+F P+ PV I ++ + G +G V+F S ++ ++AL+ ++ MG RYIE++ E+
Sbjct: 315 EFLAPLRPVAIRIVRNAHGNKTGYIFVDFRSEEEIKQALKCNREYMGGRYIEIFREKN 372
>gi|3970860|dbj|BAA34794.1| HRIHFB2091 [Homo sapiens]
Length = 376
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 300 TVIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVI 359
Query: 203 RHKEK-IGHRLVTLVMS 218
++ IG R V LV+
Sbjct: 360 DLNDRPIGSRKVKLVLG 376
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%)
Query: 156 KEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
K DV +FLEG+ + N + + D G+ G A +QF ++++A K+ H++K+ R
Sbjct: 1 KMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSERLHRKKLNGR 56
>gi|226533389|ref|NP_001034357.2| RNA binding motif protein 19 [Gallus gallus]
Length = 957
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 33/53 (62%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIEL 74
+FF P+ P+ I + + G+S+G V+ S + Q+AL+R K +G +Y+E+
Sbjct: 325 EFFSPLKPLAIRMGKNTQGKSTGFIFVDLKSEAEVQKALKRKKEYIGGQYVEV 377
>gi|198415693|ref|XP_002128145.1| PREDICTED: similar to RNA binding motif protein 19 [Ciona
intestinalis]
Length = 766
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 76/181 (41%), Gaps = 31/181 (17%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF PI ++ + D G +G V F + +D + AL+ + + RYIEL+ +
Sbjct: 161 EFFFPITVKSLNVQKTDHGSRTGFVYVHFKTEEDREAALKHNGDYIKGRYIELFKQLA-- 218
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
A +G G PY + WM++ D + + SG
Sbjct: 219 ---AKHQGKQG-------PY---------YEKAWMKKVAEGHQD--CETEDISESGR--- 254
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIP-HDYAGRCTGVAYIQFVDKENAEKA 200
+ ++ LPY +ED+E + + ++IP D + + G +I ++ E+A KA
Sbjct: 255 ---LYVRNLPYTATEEDLENHFKSFGPLSE-VSIPVDDMSKKSVGFGFITYMMPEHALKA 310
Query: 201 L 201
Sbjct: 311 F 311
>gi|260814902|ref|XP_002602152.1| hypothetical protein BRAFLDRAFT_158603 [Branchiostoma floridae]
gi|229287459|gb|EEN58164.1| hypothetical protein BRAFLDRAFT_158603 [Branchiostoma floridae]
Length = 170
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHD--YAGRCTGVAYIQFVDKENAEKALLRH 204
L L Y+ +E +E+F +++V + +P D +GR G Y +F DK++ KA+ +
Sbjct: 89 LGNLSYDVDEEAIERFFRDMKLVT--VRLPRDGGDSGRLKGFGYAEFEDKDSLLKAINMN 146
Query: 205 KEKIGHRLV 213
EK+ +R +
Sbjct: 147 NEKLLNRQI 155
>gi|194768695|ref|XP_001966447.1| GF22183 [Drosophila ananassae]
gi|190617211|gb|EDV32735.1| GF22183 [Drosophila ananassae]
Length = 939
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 16/107 (14%)
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENA 197
S ++ +++ +PY K++DV KF + + P + +P G+ G Y+ F +++
Sbjct: 252 SNLELFTIKIHNVPYNTKRQDVLKFFKPQK--PYSVRLP----GKVHGFCYVGFKTEKDM 305
Query: 198 EKALLRHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGSPV 244
KA+L++K + G Q F S T + +++ G PV
Sbjct: 306 AKAMLKNKS---------FIKGKQVFFS-DFTEKNKVTKASKAGQPV 342
>gi|302755192|ref|XP_002961020.1| hypothetical protein SELMODRAFT_164019 [Selaginella moellendorffii]
gi|302767142|ref|XP_002966991.1| hypothetical protein SELMODRAFT_144531 [Selaginella moellendorffii]
gi|300164982|gb|EFJ31590.1| hypothetical protein SELMODRAFT_144531 [Selaginella moellendorffii]
gi|300171959|gb|EFJ38559.1| hypothetical protein SELMODRAFT_164019 [Selaginella moellendorffii]
Length = 395
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%)
Query: 149 GLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKI 208
G+P++ E + ++ + + I + GR G Y+ F E+AEKALL
Sbjct: 18 GIPWDVDTEGLRSYMTKFGGLDDVIVMKDRSTGRSRGFGYVTFTSSEDAEKALLAQHSLS 77
Query: 209 GHRLVTLVMSGAQWFLSPPLT 229
G L V + + L P +T
Sbjct: 78 GRILEVKVATPKEEMLKPKVT 98
>gi|388491820|gb|AFK33976.1| unknown [Medicago truncatula]
Length = 170
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEK 199
VD + + + Y C EDV++ + V N +TI D G+ G AY++FV+ E ++
Sbjct: 65 VDARSIFVGNVDYACTPEDVQQHFQSCGTV-NRVTIRTDKFGQPKGYAYVEFVEVEAVQE 123
Query: 200 ALLRHKEKIGHRLVTLVMSGAQWF 223
ALL ++ ++ R + ++ + F
Sbjct: 124 ALLLNESELHGRQLKVITTKGSCF 147
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.138 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,036,258,934
Number of Sequences: 23463169
Number of extensions: 213017923
Number of successful extensions: 514508
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 226
Number of HSP's that attempted gapping in prelim test: 508521
Number of HSP's gapped (non-prelim): 5178
length of query: 304
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 162
effective length of database: 9,027,425,369
effective search space: 1462442909778
effective search space used: 1462442909778
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 76 (33.9 bits)