BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10467
(304 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q60HC3|HNRPF_MACFA Heterogeneous nuclear ribonucleoprotein F OS=Macaca fascicularis
GN=HNRNPF PE=2 SV=3
Length = 415
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 102/192 (53%), Gaps = 46/192 (23%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S DD + AL++ + +MG RYIE++
Sbjct: 51 GRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVF------------------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ R+EMDW LK G + SA D +RL+GLP+ C KE++
Sbjct: 87 ------------------KSHRTEMDWVLKHSGPNSADSAND-GFVRLRGLPFGCTKEEI 127
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+F GLEIVPNGIT+P D G+ TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 128 VQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSS 187
Query: 220 AQ---WFLSPPL 228
+ + PPL
Sbjct: 188 QEEVRSYSDPPL 199
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++ T
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTG 366
Query: 82 SKEA 85
+
Sbjct: 367 ASNG 370
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D G+ +GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVF 184
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
++L+GLP+ C EDV+ FL I G+ + GR +G A+++ +++ + AL
Sbjct: 13 VKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMALK 72
Query: 203 RHKEKIGHRLVTLVMS 218
+ +E +GHR + + S
Sbjct: 73 KDRESMGHRYIEVFKS 88
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY+ + D+ F L V I I D GR TG A ++F E A A+ +
Sbjct: 290 CVHMRGLPYKATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEEAVAAMSK 347
Query: 204 HKEKIGHRLVTLVMS 218
+ + HR + L ++
Sbjct: 348 DRANMQHRYIELFLN 362
>sp|P52597|HNRPF_HUMAN Heterogeneous nuclear ribonucleoprotein F OS=Homo sapiens GN=HNRNPF
PE=1 SV=3
Length = 415
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 102/192 (53%), Gaps = 46/192 (23%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S DD + AL++ + +MG RYIE++
Sbjct: 51 GRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVF------------------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ R+EMDW LK G + SA D +RL+GLP+ C KE++
Sbjct: 87 ------------------KSHRTEMDWVLKHSGPNSADSAND-GFVRLRGLPFGCTKEEI 127
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+F GLEIVPNGIT+P D G+ TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 128 VQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSS 187
Query: 220 AQW---FLSPPL 228
+ + PPL
Sbjct: 188 QEEVRSYSDPPL 199
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++ T
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTG 366
Query: 82 SKEA 85
+
Sbjct: 367 ASNG 370
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D G+ +GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVF 184
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
++L+GLP+ C EDV+ FL I G+ + GR +G A+++ +++ + AL
Sbjct: 13 VKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMALK 72
Query: 203 RHKEKIGHRLVTLVMS 218
+ +E +GHR + + S
Sbjct: 73 KDRESMGHRYIEVFKS 88
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY+ + D+ F L V I I D GR TG A ++F E A A+ +
Sbjct: 290 CVHMRGLPYKATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEEAVAAMSK 347
Query: 204 HKEKIGHRLVTLVMS 218
+ + HR + L ++
Sbjct: 348 DRANMQHRYIELFLN 362
>sp|Q794E4|HNRPF_RAT Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus
GN=Hnrnpf PE=1 SV=3
Length = 415
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 102/192 (53%), Gaps = 46/192 (23%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S DD + AL++ + +MG RYIE++
Sbjct: 51 GRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVF------------------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ R+EMDW LK G + SA D +RL+GLP+ C KE++
Sbjct: 87 ------------------KSHRTEMDWVLKHSGPNSADSAND-GFVRLRGLPFGCTKEEI 127
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+F GLEIVPNGIT+P D G+ TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 128 VQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSS 187
Query: 220 AQW---FLSPPL 228
+ + PPL
Sbjct: 188 QEEVRSYSDPPL 199
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 106/245 (43%), Gaps = 59/245 (24%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY---M 76
QFF IVP I L D G+ +GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQ 188
Query: 77 EE-----------------------GTSS------KEA------NGRGTGGFGGVK---- 97
EE GT+ K+A +G + G+GG +
Sbjct: 189 EEVRSYSDPPLKFMSVQRPGPYDRPGTARRYIGIVKQAGLDRMRSGAYSAGYGGYEEYSG 248
Query: 98 -STPYGVGIFCISQFLA---KWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYE 153
S YG + L+ M + + ++ ++ S C + ++GLPY+
Sbjct: 249 LSDGYGFTTDLFGRDLSYCLSGMYDHRYGDSEFTVQ--------STTGHC-VHMRGLPYK 299
Query: 154 CKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLV 213
+ D+ F L V I I D GR TG A ++F E A A+ + + + HR +
Sbjct: 300 ATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 357
Query: 214 TLVMS 218
L ++
Sbjct: 358 ELFLN 362
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++ T
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTG 366
Query: 82 SKEA 85
+
Sbjct: 367 ASNG 370
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
++L+GLP+ C EDV+ FL I G+ + GR +G A+++ +++ + AL
Sbjct: 13 VKLRGLPWSCSIEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLALK 72
Query: 203 RHKEKIGHRLVTLVMS 218
+ +E +GHR + + S
Sbjct: 73 KDRESMGHRYIEVFKS 88
>sp|Q9Z2X1|HNRPF_MOUSE Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus GN=Hnrnpf
PE=1 SV=3
Length = 415
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 102/192 (53%), Gaps = 46/192 (23%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S DD + AL++ + +MG RYIE++
Sbjct: 51 GRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVF------------------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ R+EMDW LK G + SA D +RL+GLP+ C KE++
Sbjct: 87 ------------------KSHRTEMDWVLKHSGPNSADSAND-GFVRLRGLPFGCTKEEI 127
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+F GLEIVPNGIT+P D G+ TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 128 VQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSS 187
Query: 220 AQW---FLSPPL 228
+ + PPL
Sbjct: 188 QEEVRSYSDPPL 199
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 106/245 (43%), Gaps = 59/245 (24%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY---M 76
QFF IVP I L D G+ +GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQ 188
Query: 77 EE-----------------------GTSS------KEA------NGRGTGGFGGVK---- 97
EE GT+ K+A +G + G+GG +
Sbjct: 189 EEVRSYSDPPLKFMSVQRPGPYDRPGTARRYIGIVKQAGLDRMRSGAYSAGYGGYEEYSG 248
Query: 98 -STPYGVGIFCISQFLA---KWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYE 153
S YG + L+ M + + ++ ++ S C + ++GLPY+
Sbjct: 249 LSDGYGFTTDLFGRDLSYCLSGMYDHRYGDSEFTVQ--------STTGHC-VHMRGLPYK 299
Query: 154 CKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLV 213
+ D+ F L V I I D GR TG A ++F E A A+ + + + HR +
Sbjct: 300 ATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEEAVAAMSKDRANMQHRYI 357
Query: 214 TLVMS 218
L ++
Sbjct: 358 ELFLN 362
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++ T
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTG 366
Query: 82 SKEA 85
+
Sbjct: 367 ASNG 370
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
++L+GLP+ C EDV+ FL I G+ + GR +G A+++ +++ + AL
Sbjct: 13 VKLRGLPWSCSIEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLALK 72
Query: 203 RHKEKIGHRLVTLVMS 218
+ +E +GHR + + S
Sbjct: 73 KDRESMGHRYIEVFKS 88
>sp|Q5E9J1|HNRPF_BOVIN Heterogeneous nuclear ribonucleoprotein F OS=Bos taurus GN=HNRNPF
PE=2 SV=3
Length = 414
Score = 125 bits (313), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 102/192 (53%), Gaps = 46/192 (23%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S DD + AL++ + +MG RYIE++
Sbjct: 51 GRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVF------------------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ R+EMDW LK G + +A D +RL+GLP+ C KE++
Sbjct: 87 ------------------KSHRTEMDWVLKHSGPNSADTAND-GFVRLRGLPFGCTKEEI 127
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG 219
+F GLEIVPNGIT+P D G+ TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 128 IQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSS 187
Query: 220 AQW---FLSPPL 228
+ + PPL
Sbjct: 188 QEEVRSYSDPPL 199
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 103/242 (42%), Gaps = 53/242 (21%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY---M 76
QFF IVP I L D G+ +GEA V+F+S + A++AL +HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQ 188
Query: 77 EE-----------------------GTSS------KEA------NGRGTGGFGGVK---- 97
EE GT+ K+A +G + G+GG +
Sbjct: 189 EEVRSYSDPPLKFMSVQRPGPYDRPGTARRYIGIVKQAGLERMRSGAYSAGYGGYEEYSG 248
Query: 98 -STPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKK 156
S YG + L+ + S M G S C + ++GLPY+ +
Sbjct: 249 LSDGYGFTTDLFGRDLSYCL-----SGMYDHRYGDGEFTVQSTTGHC-VHMRGLPYKATE 302
Query: 157 EDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLV 216
D+ F L V I I D GR TG A ++F E A A+ + + + HR + L
Sbjct: 303 NDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELF 360
Query: 217 MS 218
++
Sbjct: 361 LN 362
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF P+ PV + + GR +GEADVEF++ ++A A+ + ++NM RYIEL++ T
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTG 366
Query: 82 SKEA 85
+
Sbjct: 367 ASNG 370
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPN--GITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
++L+GLP+ C EDV+ FL I G+ + GR +G A+++ +++ + AL
Sbjct: 12 VVKLRGLPWSCSVEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLAL 71
Query: 202 LRHKEKIGHRLVTLVMS 218
+ +E +GHR + + S
Sbjct: 72 KKDRESMGHRYIEVFKS 88
>sp|P31943|HNRH1_HUMAN Heterogeneous nuclear ribonucleoprotein H OS=Homo sapiens
GN=HNRNPH1 PE=1 SV=4
Length = 449
Score = 121 bits (304), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 43 IRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF---------------- 86
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 87 --------------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 119
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 120 FGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 179
Query: 212 LVTLVMS 218
+ + S
Sbjct: 180 YIEIFKS 186
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFL 361
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
++++GLP+ C ++V++F +I GI + GR +G A+++ ++ + AL
Sbjct: 12 VVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLAL 71
Query: 202 LRHKEKIGHRLVTLVMS 218
+ +E +GHR V + S
Sbjct: 72 KKDRETMGHRYVEVFKS 88
>sp|O35737|HNRH1_MOUSE Heterogeneous nuclear ribonucleoprotein H OS=Mus musculus
GN=Hnrnph1 PE=1 SV=3
Length = 449
Score = 121 bits (304), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 43 IRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF---------------- 86
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 87 --------------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 119
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 120 FGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 179
Query: 212 LVTLVMS 218
+ + S
Sbjct: 180 YIEIFKS 186
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 307 NFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFL 361
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD--GRVTGEADVEFATHEDAVAAMSK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQF 191
+L + ++++GLP+ C ++V++F +I GI + GR +G A+++
Sbjct: 2 MLGAEGGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVEL 61
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMS 218
++ + AL + +E +GHR V + S
Sbjct: 62 ESEDEVKLALKKDRETMGHRYVEVFKS 88
>sp|Q6AY09|HNRH2_RAT Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus
GN=Hnrnph2 PE=1 SV=1
Length = 449
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 94/179 (52%), Gaps = 43/179 (24%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 51 GRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF------------------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ EMDW LK G +A D +RL+GLP+ C KE++
Sbjct: 87 ------------------KSNSVEMDWVLKHTGPNSPDTAND-GFVRLRGLPFGCSKEEI 127
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+F GLEIVPNG+T+P D+ GR TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 128 VQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKS 186
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ P+ + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 307 NFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELFLNSTAG 366
Query: 80 TS 81
TS
Sbjct: 367 TS 368
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP + L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L + I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPD--GRVTGEADVEFATHEDAVAAMAK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQF 191
+LS + ++++GLP+ C E+V +F +I +G+ + GR +G A+++
Sbjct: 2 MLSTEGREGFVVKVRGLPWSCSAEEVMRFFSDCKIQNGTSGVRFIYTREGRPSGEAFVEL 61
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA---QWFL------SPPLTNE 231
++ + AL + +E +GHR V + S + W L SP N+
Sbjct: 62 ESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHTGPNSPDTAND 110
>sp|P70333|HNRH2_MOUSE Heterogeneous nuclear ribonucleoprotein H2 OS=Mus musculus
GN=Hnrnph2 PE=1 SV=1
Length = 449
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 94/179 (52%), Gaps = 43/179 (24%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 51 GRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF------------------------ 86
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
++ EMDW LK G +A D +RL+GLP+ C KE++
Sbjct: 87 ------------------KSNSVEMDWVLKHTGPNSPDTAND-GFVRLRGLPFGCSKEEI 127
Query: 160 EKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+F GLEIVPNG+T+P D+ GR TG A++QF +E AEKAL +HKE+IGHR + + S
Sbjct: 128 VQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKS 186
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ P+ + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 307 NFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELFLNSTAG 366
Query: 80 TS 81
TS
Sbjct: 367 TS 368
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP + L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L + I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPD--GRVTGEADVEFATHEDAVAAMAK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQF 191
+LS + ++++GLP+ C E+V +F +I +G+ + GR +G A+++
Sbjct: 2 MLSTEGREGFVVKVRGLPWSCSAEEVMRFFSDCKIQNGTSGVRFIYTREGRPSGEAFVEL 61
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA---QWFL------SPPLTNE 231
++ + AL + +E +GHR V + S + W L SP N+
Sbjct: 62 ESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHTGPNSPDTAND 110
>sp|Q3SZF3|HNRH2_BOVIN Heterogeneous nuclear ribonucleoprotein H2 OS=Bos taurus GN=HNRNPH2
PE=2 SV=1
Length = 449
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 43 IRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF---------------- 86
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 87 --------------------------KSNSVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 119
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNG+T+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 120 FGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 179
Query: 212 LVTLVMS 218
+ + S
Sbjct: 180 YIEIFKS 186
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ P+ + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 307 NFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELFLNSTAG 366
Query: 80 TS 81
TS
Sbjct: 367 TS 368
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP + L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L + I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPD--GRVTGEADVEFATHEDAVAAMAK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQF 191
+LS + ++++GLP+ C ++V +F +I +GI + GR +G A+++
Sbjct: 2 MLSTEGREGFVVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVEL 61
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA---QWFL------SPPLTNE 231
++ + AL + +E +GHR V + S + W L SP N+
Sbjct: 62 ESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHTGPNSPDTAND 110
>sp|Q8VHV7|HNRH1_RAT Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus
GN=Hnrnph1 PE=1 SV=2
Length = 449
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S D+ + AL++ + MG RY+E++
Sbjct: 43 IRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVF---------------- 86
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 87 --------------------------KSNNVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 119
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C +E++ +F GLEIVPNGIT+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 120 FGCSEEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 179
Query: 212 LVTLVMS 218
+ + S
Sbjct: 180 YIEIFKS 186
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 38/55 (69%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV + + T GR +GEADVEF++ +DA A+ + K+NM RY+EL++
Sbjct: 307 NFFSPLNPVRVHIETGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFL 361
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP I L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L V I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPVRVHIETGPD--GRVTGEADVEFATHEDAVAAMSK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQF 191
+L + ++++GLP+ C ++V++F +I GI + GR +G A+++
Sbjct: 2 MLGAEGGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVEL 61
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMS 218
++ + AL + +E +GHR V + S
Sbjct: 62 ESEDEVKLALKKDRETMGHRYVEVFKS 88
>sp|Q5RD26|HNRH2_PONAB Heterogeneous nuclear ribonucleoprotein H2 OS=Pongo abelii
GN=HNRNPH2 PE=2 SV=1
Length = 449
Score = 118 bits (296), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S ++ + AL++ + MG RY+E++
Sbjct: 43 IRFIYTREGRPSGEAFVELESEEEVKLALKKDRETMGHRYVEVF---------------- 86
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 87 --------------------------KSNSVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 119
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNG+T+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 120 FGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 179
Query: 212 LVTLVMS 218
+ + S
Sbjct: 180 YIEIFKS 186
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ P+ + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 307 NFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELFLNSTAG 366
Query: 80 TS 81
TS
Sbjct: 367 TS 368
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP + L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L + I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPD--GRVTGEADVEFATHEDAVAAMAK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQF 191
+LS + ++++GLP+ C ++V +F +I +GI + GR +G A+++
Sbjct: 2 MLSTEGREGFVVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVEL 61
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA---QWFL------SPPLTNE 231
+E + AL + +E +GHR V + S + W L SP N+
Sbjct: 62 ESEEEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHTGPNSPDTAND 110
>sp|P55795|HNRH2_HUMAN Heterogeneous nuclear ribonucleoprotein H2 OS=Homo sapiens
GN=HNRNPH2 PE=1 SV=1
Length = 449
Score = 118 bits (296), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 96/187 (51%), Gaps = 43/187 (22%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I + GR SGEA VE S ++ + AL++ + MG RY+E++
Sbjct: 43 IRFIYTREGRPSGEAFVELESEEEVKLALKKDRETMGHRYVEVF---------------- 86
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
++ EMDW LK G +A D +RL+GLP
Sbjct: 87 --------------------------KSNSVEMDWVLKHTGPNSPDTAND-GFVRLRGLP 119
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHR 211
+ C KE++ +F GLEIVPNG+T+P D+ GR TG A++QF +E AEKAL +HKE+IGHR
Sbjct: 120 FGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 179
Query: 212 LVTLVMS 218
+ + S
Sbjct: 180 YIEIFKS 186
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE--G 79
FF P+ P+ + + GR +GEADVEF++ +DA A+ + K+NM RY+EL++ G
Sbjct: 307 NFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELFLNSTAG 366
Query: 80 TS 81
TS
Sbjct: 367 TS 368
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF IVP + L D GRS+GEA V+F+S + A++AL++HK +G RYIE++
Sbjct: 129 QFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
C+ ++GLPY + D+ F L + I I D GR TG A ++F E+A A+ +
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPD--GRVTGEADVEFATHEDAVAAMAK 347
Query: 204 HKEKIGHRLVTLVMS 218
K + HR V L ++
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQF 191
+LS + ++++GLP+ C ++V +F +I +GI + GR +G A+++
Sbjct: 2 MLSTEGREGFVVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVEL 61
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA---QWFL------SPPLTNE 231
+E + AL + +E +GHR V + S + W L SP N+
Sbjct: 62 ESEEEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLKHTGPNSPDTAND 110
>sp|P31942|HNRH3_HUMAN Heterogeneous nuclear ribonucleoprotein H3 OS=Homo sapiens
GN=HNRNPH3 PE=1 SV=2
Length = 346
Score = 105 bits (261), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 67/107 (62%), Gaps = 7/107 (6%)
Query: 124 MDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRC 183
MDW +K G + +RL+GLP+ C KE++ +F +GLEIVPNGIT+ DY GR
Sbjct: 1 MDWVMKHNGP----NDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRS 56
Query: 184 TGVAYIQFVDKENAEKALLRHKEKIGHRLVTLVMSG---AQWFLSPP 227
TG A++QF KE AE AL +HKE+IGHR + + S + F PP
Sbjct: 57 TGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSSRSEIKGFYDPP 103
Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 20 CSQFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+ FF P+ P+ + + GR++GEADVEF + +DA A+ + K+NM RYIEL++
Sbjct: 211 IANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIELFLN 268
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY 75
QFF+ IVP I L D GRS+GEA V+F+S + A+ AL +HK +G RYIE++
Sbjct: 34 QFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIF 89
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKE 206
++GLP+ + D+ F L + I I D GR TG A ++FV E+A A+ + K
Sbjct: 199 MRGLPFRATENDIANFFSPLNPIRVHIDIGAD--GRATGEADVEFVTHEDAVAAMSKDKN 256
Query: 207 KIGHRLVTLVMS 218
+ HR + L ++
Sbjct: 257 NMQHRYIELFLN 268
>sp|Q12849|GRSF1_HUMAN G-rich sequence factor 1 OS=Homo sapiens GN=GRSF1 PE=1 SV=3
Length = 480
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 182 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 233
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V S V+ +RL+GLP
Sbjct: 234 -----------------------------------ALMKSLQVKSSPVVNDGVVRLRGLP 258
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 259 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 316
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 317 RYIEIFPS 324
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELY----ME 77
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++ E
Sbjct: 269 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 328
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWM-RRAKRSEMDWALKRQ----- 131
T G+ F K +F + A SE + L ++
Sbjct: 329 VRTHVGSYKGKKIASFPTAKYITEPEMVFEEHEVNEDIQPMTAFESEKEIELPKEVPEKL 388
Query: 132 -GAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
A G+ + ++GLP++ +D+ F L+ P IT+ + +G+ TG A +
Sbjct: 389 PEAADFGTTSSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEADVH 446
Query: 191 FVDKENAEKALLRHKEKIGHRLVTLVMS 218
F E+A A+L+ + + HR + L ++
Sbjct: 447 FETHEDAVAAMLKDRSHVHHRYIELFLN 474
Score = 51.2 bits (121), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 419 NFFAPLKPVRITMEYSSSGKATGEADVHFETHEDAVAAMLKDRSHVHHRYIELFL 473
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIV--PNGITIPHDYAGRCTGVAYIQFVDKENAE 198
D +R QGLP+ C EDV F I NGI + G+ G A I+ +++ +
Sbjct: 148 DVFLIRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQ 207
Query: 199 KALLRHKEKIGHRLVTL 215
KAL +H+ +G R V +
Sbjct: 208 KALEKHRMYMGQRYVEV 224
>sp|Q8C5Q4|GRSF1_MOUSE G-rich sequence factor 1 OS=Mus musculus GN=Grsf1 PE=1 SV=2
Length = 479
Score = 84.7 bits (208), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 85/188 (45%), Gaps = 46/188 (24%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
I L + G+ G+A +E S D Q+AL++H+ MG RY+E+Y E N
Sbjct: 181 IHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVY--------EINNEDVD 232
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
AL + V + +RL+GLP
Sbjct: 233 -----------------------------------ALMKSLQVKPSPVLSDGVVRLRGLP 257
Query: 152 YECKKEDVEKFLEGLEIVPNGITIPHDYAGR-CTGVAYIQFVDKENAEKALLRHKEKIGH 210
Y C ++D+ F GL IV IT DY GR TG AY+QF + E A +ALL+H+E+IG+
Sbjct: 258 YSCNEKDIVDFFAGLNIV--DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 315
Query: 211 RLVTLVMS 218
R + + S
Sbjct: 316 RYIEIFPS 323
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 18/210 (8%)
Query: 23 FFKPIVPVNILLLTDDAGR-SSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF + V+I + D GR +GEA V+F + A +AL +H+ +G+RYIE++
Sbjct: 268 FFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 327
Query: 82 SKEANGRGTGGFGGVKSTP-----YGVGIFCISQFLAKWMRRAKRSEMDWAL-------- 128
+ G G + S+P + + + +R E D +
Sbjct: 328 VRTHVGSHKGK--KMTSSPPTKYITEPEVVFEEHEVNEDIRPMTAFESDKEIELPKEMSE 385
Query: 129 KRQGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAY 188
K AV G+ + ++GLP++ +D+ F L+ P IT+ + +G+ TG A
Sbjct: 386 KLPEAVDFGTLPSLHFVHMRGLPFQANAQDIINFFAPLK--PVRITMEYSSSGKATGEAD 443
Query: 189 IQFVDKENAEKALLRHKEKIGHRLVTLVMS 218
+ F E+A A+L+ + + HR + L ++
Sbjct: 444 VHFDTHEDAVAAMLKDRSHVQHRYIELFLN 473
Score = 51.2 bits (121), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
FF P+ PV I + +G+++GEADV F + +DA A+ + +S++ RYIEL++
Sbjct: 418 NFFAPLKPVRITMEYSSSGKATGEADVHFDTHEDAVAAMLKDRSHVQHRYIELFL 472
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 137 GSAVDQC-CMRLQGLPYECKKEDVEKFLEGLEI--VPNGITIPHDYAGRCTGVAYIQFVD 193
G VD +R QGLP+ C EDV F I NGI + G+ G A I+
Sbjct: 142 GDEVDDVYLIRAQGLPWSCTVEDVLNFFSDCRIRNSENGIHFLLNRDGKRRGDALIEMES 201
Query: 194 KENAEKALLRHKEKIGHRLVTL 215
+++ +KAL +H+ +G R V +
Sbjct: 202 EQDVQKALEKHRMYMGQRYVEV 223
>sp|Q22708|SYM2_CAEEL RNA-binding protein sym-2 OS=Caenorhabditis elegans GN=sym-2 PE=2
SV=3
Length = 618
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 44/203 (21%)
Query: 20 CSQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
+QFF IVP I L GR +GE V+FSS + AL+RH++ + RYIE+Y
Sbjct: 197 VAQFFAGLDIVPGGIALCLSSEGRRNGEVLVQFSSQESRDLALKRHRNFLLSRYIEVY-- 254
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
G L ++M A S + +S
Sbjct: 255 ------------KAG-------------------LDEFMHVATGSSTEAM-----EFVSA 278
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENA 197
+A+ +R++GLPY+C + F E L++ + I GR TG A++QF +E+A
Sbjct: 279 NAI---IVRMRGLPYDCTDAQIRTFFEPLKLTDKILFITRT-DGRPTGDAFVQFETEEDA 334
Query: 198 EKALLRHKEKIGHRLVTLVMSGA 220
++ LL+H++ IG R + L S A
Sbjct: 335 QQGLLKHRQVIGQRYIELFKSTA 357
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 82/178 (46%), Gaps = 35/178 (19%)
Query: 23 FFKPI-VPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
FF+P+ + IL +T GR +G+A V+F + +DAQ+ L +H+ +G RYIEL+
Sbjct: 300 FFEPLKLTDKILFITRTDGRPTGDAFVQFETEEDAQQGLLKHRQVIGQRYIELFKSTAAE 359
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
++ R + S+P +A + + + D
Sbjct: 360 VQQVVKRC----NLINSSPA----------VANAVEAPEEKKKD---------------- 389
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVP--NGITIPHDYAGRCTGVAYIQFVDKENA 197
C+RL+GLPYE + + FL + G+ + ++ G +G A+IQ ++++ A
Sbjct: 390 --CVRLRGLPYEATVQHIVTFLGDFATMVKFQGVHMVYNNQGHPSGEAFIQMINEQAA 445
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%)
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
G+ D R +GLP++ V +F GL+IVP GI + GR G +QF +E+
Sbjct: 175 GADGDNVVCRARGLPWQASDHHVAQFFAGLDIVPGGIALCLSSEGRRNGEVLVQFSSQES 234
Query: 197 AEKALLRHKEKIGHRLVTLVMSGAQWFL 224
+ AL RH+ + R + + +G F+
Sbjct: 235 RDLALKRHRNFLLSRYIEVYKAGLDEFM 262
>sp|A1L1G1|ESRP1_DANRE Epithelial splicing regulatory protein 1 OS=Danio rerio GN=esrp1
PE=2 SV=1
Length = 714
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 95/209 (45%), Gaps = 30/209 (14%)
Query: 22 QFFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYM 76
QFF P PV IL + GR +G+A V FS + AQ AL++HK +G RYIEL+
Sbjct: 344 QFFSPACPVTDGSEGILFVRFPDGRPTGDAFVLFSCEEHAQNALKKHKDMLGKRYIELFK 403
Query: 77 EEGTSSKEA-NGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVL 135
++ N + V +P + + F+ Q A +
Sbjct: 404 STAAEVQQVLNKYSSAPLIPVAPSPI-LSVVAPPTFVP-----------------QTAAV 445
Query: 136 SGSAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVD 193
G + C+RL+GLPY+ +D+ FL G +I +G+ + ++ GR +G A+IQ
Sbjct: 446 PGV---RDCVRLRGLPYDASIQDILVFLGEYGADIKTHGVHMVLNHQGRPSGEAFIQMRS 502
Query: 194 KENAEKALLR-HKEKIGHRLVTLVMSGAQ 221
E A A R HK + R V + AQ
Sbjct: 503 AERAFLAAQRCHKRSMKERYVEVFACSAQ 531
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 90/221 (40%), Gaps = 50/221 (22%)
Query: 34 LLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGF 93
L + GR +GEA V F S + ALQRHK +MG RYIE+Y G + G GT
Sbjct: 257 LCLNAQGRRNGEALVRFESEEHRDLALQRHKHHMGGRYIEVYKATGEDFLKIAG-GT--- 312
Query: 94 GGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYE 153
S +A ++ R +Q +R++GLP+
Sbjct: 313 ---------------SNEVASFLSRE---------------------NQIIVRMRGLPFN 336
Query: 154 CKKEDVEKFLEGLEIVPN---GITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGH 210
E V +F V + GI GR TG A++ F +E+A+ AL +HK+ +G
Sbjct: 337 ATAEQVLQFFSPACPVTDGSEGILFVRFPDGRPTGDAFVLFSCEEHAQNALKKHKDMLGK 396
Query: 211 RLVTLVMSGA-------QWFLSPPLTNETPISRLDLTGSPV 244
R + L S A + S PL P L + P
Sbjct: 397 RYIELFKSTAAEVQQVLNKYSSAPLIPVAPSPILSVVAPPT 437
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F GL I G + + GR G A ++F +E+ + A
Sbjct: 223 DNTVIRARGLPWQSSDQDIARFFRGLNIAKGGAALCLNAQGRRNGEALVRFESEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGGRYIEVYKATGEDFL 306
Score = 35.8 bits (81), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELYMEEGTSSKEANGRGT 90
+ ++ + GR SGEA ++ S + A A QR HK +M +RY+E++ S++E N
Sbjct: 482 VHMVLNHQGRPSGEAFIQMRSAERAFLAAQRCHKRSMKERYVEVF---ACSAQEVNIVLM 538
Query: 91 GG 92
GG
Sbjct: 539 GG 540
>sp|Q5ZLR4|ESRP2_CHICK Epithelial splicing regulatory protein 2 OS=Gallus gallus GN=ESRP2
PE=2 SV=1
Length = 701
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 93/214 (43%), Gaps = 63/214 (29%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I + L + GR +GEA V F + + AL+RHK +MG RYIE+Y
Sbjct: 243 ARFFKGLNIAKGGVALCLNAQGRRNGEALVRFVNSEQRDLALERHKHHMGSRYIEVYKAT 302
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 303 GEEFLKIAG-GTSN--------------EVAQFLSKE----------------------- 324
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFL----------EGLEIV--PNGITIPHDYAGRCTGV 186
+Q +R++GLP+ +EDV FL EGL V P+ GR TG
Sbjct: 325 --NQVIIRMRGLPFTATQEDVLGFLGPECPVTGGKEGLLFVKYPD---------GRPTGD 373
Query: 187 AYIQFVDKENAEKALLRHKEKIGHRLVTLVMSGA 220
A++ F +E A+ AL +HKE +G R + L S A
Sbjct: 374 AFVLFSCEEYAQNALKKHKEILGKRYIELFRSTA 407
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 38/202 (18%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A V FS + AQ AL++HK +G RYIEL+
Sbjct: 346 FLGPECPVTGGKEGLLFVKYPDGRPTGDAFVLFSCEEYAQNALKKHKEILGKRYIELFRS 405
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ ++++++ + + + + + +G
Sbjct: 406 TAAEVQQ----------------------VLNRYMSTPLIPTLPTPIIPVIPPPYTIATG 443
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
S D C+RL+GLPY +D+ F+ +I P+G+ + + GR +G A+IQ +
Sbjct: 444 SIRD--CVRLRGLPYTAGIDDILDFMGDATADIKPHGVHMVLNQQGRPSGDAFIQM---K 498
Query: 196 NAEKALLR----HKEKIGHRLV 213
+A+KA + HK+ + R V
Sbjct: 499 SADKAFMVAQKCHKKMMKDRYV 520
Score = 57.8 bits (138), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +D+ +F +GL I G+ + + GR G A ++FV+ E + AL
Sbjct: 225 ETVIRARGLPWQSSDQDIARFFKGLNIAKGGVALCLNAQGRRNGEALVRFVNSEQRDLAL 284
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + FL
Sbjct: 285 ERHKHHMGSRYIEVYKATGEEFL 307
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELYMEEGTSSKEA 85
I P + ++ + GR SG+A ++ S D A Q+ HK M DRY+E++ S +E
Sbjct: 474 IKPHGVHMVLNQQGRPSGDAFIQMKSADKAFMVAQKCHKKMMKDRYVEVFQ---CSGEEM 530
Query: 86 NGRGTGG 92
N GG
Sbjct: 531 NFVLMGG 537
>sp|Q8SQ27|RBM12_MACMU RNA-binding protein 12 OS=Macaca mulatta GN=RBM12 PE=2 SV=1
Length = 932
Score = 68.9 bits (167), Expect = 4e-11, Method: Composition-based stats.
Identities = 55/217 (25%), Positives = 101/217 (46%), Gaps = 23/217 (10%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF + + LL D GR++G V+F S D AL+R++ M RY+E+
Sbjct: 323 FFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-------- 374
Query: 83 KEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQ 142
A R GG + +G S + + R+K + + +G
Sbjct: 375 SPATERQWVAAGGHITFKQNMGPSGQSHPPPQTLPRSKSPSGQKRSRSRSPHEAGF---- 430
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
C+ L+GLP+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL
Sbjct: 431 -CVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC 489
Query: 203 RHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDL 239
RHK+ +G+R + + P+T + + ++D+
Sbjct: 490 RHKQYMGNRFIQV----------HPITKKGMLEKIDM 516
Score = 64.3 bits (155), Expect = 1e-09, Method: Composition-based stats.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMMLNPEGDVNSA--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K+
Sbjct: 543 -KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 ERLHRKKLNGR 612
Score = 40.0 bits (92), Expect = 0.022, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 858 IKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDL 917
Query: 205 KEK-IGHRLVTLVM 217
++ IG R V LV+
Sbjct: 918 NDRPIGSRKVKLVL 931
Score = 39.7 bits (91), Expect = 0.026, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++R
Sbjct: 5 IRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMMRT 60
Query: 205 KEKIGHRLVTLVMS 218
I VTL++S
Sbjct: 61 GGTIKGSKVTLLLS 74
>sp|Q6DEZ7|ESRP1_XENTR Epithelial splicing regulatory protein 1 OS=Xenopus tropicalis
GN=esrp1 PE=2 SV=1
Length = 687
Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 90/208 (43%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG+RYIE+Y
Sbjct: 243 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGNRYIEVY--- 299
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
+A G G S ++QFL+K
Sbjct: 300 -----KATGEDFLKIAGGTSNE-------VAQFLSKE----------------------- 324
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F V G +T P + R TG A++ F
Sbjct: 325 --NQVIVRMRGLPFTATAEEVLAFFGQQCPVTGGKEGILFVTYPDN---RPTGDAFVLFA 379
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HKE +G R + L S A
Sbjct: 380 CEEYAQNALKKHKELLGKRYIELFRSTA 407
Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 224 DNTIIRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 283
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G+R + + + + FL
Sbjct: 284 LQRHKHHMGNRYIEVYKATGEDFL 307
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 106/271 (39%), Gaps = 53/271 (19%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF PV IL +T R +G+A V F+ + AQ AL++HK +G RYIEL+
Sbjct: 346 FFGQQCPVTGGKEGILFVTYPDNRPTGDAFVLFACEEYAQNALKKHKELLGKRYIELFRS 405
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ R + TP + + F+ R
Sbjct: 406 TAAEVQQVLNRYSSAPLIPLPTPPIIPVL-PQPFIPPVNVRD------------------ 446
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
C+RL+GLPY ED+ +FL +I +G+ + ++ GR +G ++IQ +
Sbjct: 447 ------CIRLRGLPYAATIEDILEFLGEFSADIRTHGVHMVLNHQGRPSGDSFIQMKSAD 500
Query: 196 NAEKALLR-HKEKIGHRLVTLVMSGAQWF-------------LSPPLTN----ETPISRL 237
A A + HK+ + R V + A+ LSPP P
Sbjct: 501 RAYLAAQKCHKKTMKDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTF 560
Query: 238 DLTGSPVRSTICVLCHP---LTPRSVRPRSV 265
+ + + L P L PRS++P +
Sbjct: 561 PAQAAVIPTEAAALYQPSLLLNPRSLQPSAA 591
>sp|Q7ZY29|ESRP1_XENLA Epithelial splicing regulatory protein 1 OS=Xenopus laevis GN=esrp1
PE=2 SV=1
Length = 688
Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 90/208 (43%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG+RYIE+Y
Sbjct: 243 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGNRYIEVY--- 299
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
+A G G S ++QFL+K
Sbjct: 300 -----KATGEDFLKIAGGTSNE-------VAQFLSKE----------------------- 324
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F V G +T P + R TG A++ F
Sbjct: 325 --NQVIVRMRGLPFTATAEEVLAFFGQQCPVTGGKEGILFVTYPDN---RPTGDAFVLFA 379
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HKE +G R + L S A
Sbjct: 380 CEEYAQNALKKHKELLGKRYIELFRSTA 407
Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 224 DNTIIRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 283
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G+R + + + + FL
Sbjct: 284 LQRHKHHMGNRYIEVYKATGEDFL 307
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 106/271 (39%), Gaps = 53/271 (19%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
FF PV IL +T R +G+A V F+ + AQ AL++HK +G RYIEL+
Sbjct: 346 FFGQQCPVTGGKEGILFVTYPDNRPTGDAFVLFACEEYAQNALKKHKELLGKRYIELFRS 405
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ R + TP + + F+ R
Sbjct: 406 TAAEVQQVLNRYSSAPLIPLPTPPIIPVL-PQPFIPPVNVRD------------------ 446
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
C+RL+GLPY ED+ +FL +I +G+ + ++ GR +G ++IQ +
Sbjct: 447 ------CIRLRGLPYAATIEDILEFLGEFSADIRTHGVHMVLNHQGRPSGDSFIQMKSAD 500
Query: 196 NAEKALLR-HKEKIGHRLVTLVMSGAQWF-------------LSPPLTN----ETPISRL 237
A A + HK+ + R V + A+ LSPP P
Sbjct: 501 RAYLAAQKCHKKTMKDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTF 560
Query: 238 DLTGSPVRSTICVLCHP---LTPRSVRPRSV 265
+ + + L P L PRS++P +
Sbjct: 561 PAQAAVIPTEAAALYQPSLLLNPRSLQPSAA 591
>sp|Q3US41|ESRP1_MOUSE Epithelial splicing regulatory protein 1 OS=Mus musculus GN=Esrp1
PE=2 SV=2
Length = 680
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 241 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 300
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 301 GEDFLKIAG-GTSNE--------------VAQFLSKE----------------------- 322
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 323 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 377
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HKE +G R + L S A
Sbjct: 378 CEEYAQNALRKHKELLGKRYIELFRSTA 405
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 109/256 (42%), Gaps = 47/256 (18%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 358 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKELLGKRYIELFRSTAAEVQQV------ 411
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 412 ----------------LNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNVRD--CIRLRGLP 452
Query: 152 YECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 453 YAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTM 512
Query: 209 GHRLVTLVMSGAQWF-------------LSPP---LTNETPISRLDLTGSPVRSTICVLC 252
R V + A+ LSPP L +P S + V T +
Sbjct: 513 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPTAVIPTEAAIY 572
Query: 253 HP---LTPRSVRPRSV 265
P L PR+++P +
Sbjct: 573 QPSLLLNPRALQPSTA 588
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 222 DSTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 281
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 282 LQRHKHHMGTRYIEVYKATGEDFL 305
>sp|Q5RBM8|RBM12_PONAB RNA-binding protein 12 OS=Pongo abelii GN=RBM12 PE=2 SV=1
Length = 932
Score = 67.8 bits (164), Expect = 9e-11, Method: Composition-based stats.
Identities = 54/217 (24%), Positives = 101/217 (46%), Gaps = 23/217 (10%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF + + LL D GR++G V+F S D AL+R++ M RY+E+
Sbjct: 323 FFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-------- 374
Query: 83 KEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQ 142
A R GG + +G + + + R+K + + +G
Sbjct: 375 SPATERQWVAAGGHITFKQNMGPSGQTHPPPQTLPRSKSPSGQKRSRSRSPHEAGF---- 430
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
C+ L+GLP+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL
Sbjct: 431 -CVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC 489
Query: 203 RHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDL 239
RHK+ +G+R + + P+T + + ++D+
Sbjct: 490 RHKQYMGNRFIQV----------HPITKKGMLEKIDM 516
Score = 64.3 bits (155), Expect = 1e-09, Method: Composition-based stats.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMILNPEGDVNSA--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K+
Sbjct: 543 -KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 ERLHRKKLNGR 612
Score = 39.7 bits (91), Expect = 0.026, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++R
Sbjct: 5 IRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMMRT 60
Query: 205 KEKIGHRLVTLVMS 218
I VTL++S
Sbjct: 61 GGTIKGSKVTLLLS 74
Score = 37.7 bits (86), Expect = 0.095, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 860 IKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDL 919
Query: 205 KEK-IGHRLVTL 215
++ IG R V L
Sbjct: 920 NDRPIGSRKVNL 931
>sp|Q8R4X3|RBM12_MOUSE RNA-binding protein 12 OS=Mus musculus GN=Rbm12 PE=1 SV=3
Length = 992
Score = 67.8 bits (164), Expect = 9e-11, Method: Composition-based stats.
Identities = 54/218 (24%), Positives = 103/218 (47%), Gaps = 23/218 (10%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+FF + + LL D GR++G V+F S D AL+R++ M RY+E+ +
Sbjct: 322 EFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-----SP 376
Query: 82 SKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVD 141
+ E GG K + +G + + + R+K + + +G
Sbjct: 377 ATERQWVAAGGHITFKQS---MGPSGQAHPPPQTLPRSKSPSGQKRSRSRSPHEAGF--- 430
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
C+ L+GLP+E + + V F + L+IV + I I + G+ TG +++F + + + AL
Sbjct: 431 --CVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNDADYKAAL 488
Query: 202 LRHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDL 239
RHK+ +G+R + + P+T + + ++D+
Sbjct: 489 CRHKQYMGNRFIQV----------HPITKKGMLEKIDM 516
Score = 61.2 bits (147), Expect = 9e-09, Method: Composition-based stats.
Identities = 49/191 (25%), Positives = 89/191 (46%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQRELVLNPEGEVSSA--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + + + + D G+ G A +QF +++A K+
Sbjct: 543 -KVCAHITNIPFSITKMDVLQFLEGIPVDESAVHVLVDNNGQGLGQALVQFKTEDDAHKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 EHLHRKKLNGR 612
Score = 40.0 bits (92), Expect = 0.024, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 918 IKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDL 977
Query: 205 KEK-IGHRLVTLVM 217
++ IG R V LV+
Sbjct: 978 NDRPIGSRKVKLVL 991
Score = 39.7 bits (91), Expect = 0.030, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++R
Sbjct: 5 IRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMMRT 60
Query: 205 KEKIGHRLVTLVMS 218
I VTL++S
Sbjct: 61 GGTIKGSKVTLLLS 74
Score = 33.5 bits (75), Expect = 2.1, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 22 QFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRA--LQRHKSNMGDRYIELYME 77
QF + P+ + +L D+ G+ G+A V+F + DDA ++ L R K N + ++ +
Sbjct: 562 QFLEGIPVDESAVHVLVDNNGQGLGQALVQFKTEDDAHKSEHLHRKKLNGREAFVHIVTL 621
Query: 78 EGTSSKEANGRGTGGFGGVKSTP 100
E E N G G S P
Sbjct: 622 EDMREIEKNPPAQGKKGLKISVP 644
>sp|Q9NTZ6|RBM12_HUMAN RNA-binding protein 12 OS=Homo sapiens GN=RBM12 PE=1 SV=1
Length = 932
Score = 67.8 bits (164), Expect = 9e-11, Method: Composition-based stats.
Identities = 54/217 (24%), Positives = 101/217 (46%), Gaps = 23/217 (10%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF + + LL D GR++G V+F S D AL+R++ M RY+E+
Sbjct: 323 FFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEV-------- 374
Query: 83 KEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQ 142
A R GG + +G + + + R+K + + +G
Sbjct: 375 SPATERQWVAAGGHITFKQNMGPSGQTHPPPQTLPRSKSPSGQKRSRSRSPHEAGF---- 430
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
C+ L+GLP+E + + V F + L+IV + I I + G+ TG +++F ++ + + AL
Sbjct: 431 -CVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC 489
Query: 203 RHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDL 239
RHK+ +G+R + + P+T + + ++D+
Sbjct: 490 RHKQYMGNRFIQV----------HPITKKGMLEKIDM 516
Score = 63.9 bits (154), Expect = 1e-09, Method: Composition-based stats.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 23 FFKP--IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGT 80
FFK IV +I + G+++GE VEF + D + AL RHK MG+R+I+++
Sbjct: 449 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVH----P 504
Query: 81 SSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAV 140
+K+ G+ + K ++ + + L +G V S
Sbjct: 505 ITKK-------------------GMLEKIDMIRKRLQNFSYDQREMILNPEGDVNSA--- 542
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
+ C + +P+ K DV +FLEG+ + N + + D G+ G A +QF ++++A K+
Sbjct: 543 -KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKS 601
Query: 201 LLRHKEKIGHR 211
H++K+ R
Sbjct: 602 ERLHRKKLNGR 612
Score = 40.0 bits (92), Expect = 0.022, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+++Q +P+ +++ F G +++P + + ++ G TG A + F ++ A A++
Sbjct: 858 IKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDL 917
Query: 205 KEK-IGHRLVTLVM 217
++ IG R V LV+
Sbjct: 918 NDRPIGSRKVKLVL 931
Score = 39.7 bits (91), Expect = 0.026, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+RLQGLP D+ F GL I G+ I G G A+I F E+A ++R
Sbjct: 5 IRLQGLPIVAGTMDIRHFFSGLTIPDGGVHI----VGGELGEAFIVFATDEDARLGMMRT 60
Query: 205 KEKIGHRLVTLVMS 218
I VTL++S
Sbjct: 61 GGTIKGSKVTLLLS 74
>sp|B2RYD2|ESRP1_RAT Epithelial splicing regulatory protein 1 OS=Rattus norvegicus
GN=Esrp1 PE=2 SV=2
Length = 677
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 121/300 (40%), Gaps = 75/300 (25%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 301
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 302 GEDFLKIAG-GTSN--------------EVAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA-------QWFLSPPLTNETPISRLDLTGSPVR 245
+E A+ AL +HK+ +G R + L S A F S PL + L +P+
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAPL--------IPLPTAPI- 429
Query: 246 STICVLCHPLTPRS-----VRPRSVRQSEHEWWALARLGSFLIS-RTHQIIIPRSYHRRP 299
I VL P + VR R + + L LG F RTH + + ++ RP
Sbjct: 430 --IPVLPQQFVPPTNVRDCVRLRGLPYAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRP 487
Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 84/196 (42%), Gaps = 34/196 (17%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++ R
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNR--- 415
Query: 92 GFGGVKSTPYGVG-IFCI--SQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQ 148
F P I + QF+ R C+RL+
Sbjct: 416 -FSSAPLIPLPTAPIIPVLPQQFVPPTNVRD------------------------CVRLR 450
Query: 149 GLPYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HK 205
GLPY ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK
Sbjct: 451 GLPYAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHK 510
Query: 206 EKIGHRLVTLVMSGAQ 221
+ + R V + A+
Sbjct: 511 KTMKDRYVEVFQCSAE 526
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRH 204
+R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + AL RH
Sbjct: 227 VRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRH 286
Query: 205 KEKIGHRLVTLVMSGAQWFL 224
K +G R + + + + FL
Sbjct: 287 KHHMGTRYIEVYKATGEDFL 306
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELYMEEGTSSKEANGRGT 90
+ ++ + GR SG+A ++ S D A A Q+ HK M DRY+E++ S++E N
Sbjct: 477 VHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTMKDRYVEVFQ---CSAEEMNFVLM 533
Query: 91 GG 92
GG
Sbjct: 534 GG 535
>sp|Q7ZVR8|ESRP2_DANRE Epithelial splicing regulatory protein 2 OS=Danio rerio GN=esrp2
PE=2 SV=2
Length = 736
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 90/209 (43%), Gaps = 53/209 (25%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I + L + GR +GEA V F + + AL RHK +MG RYIE+Y
Sbjct: 241 ARFFKGLNIAKGGVALCLNAQGRRNGEALVRFINSEHRDMALDRHKHHMGSRYIEVYKAT 300
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 301 GEEFLKIAG-GTSNE--------------VAQFLSKE----------------------- 322
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFL-------EGLEIVPNGITIPHDYAGRCTGVAYIQF 191
+Q +R++GLP+ +DV FL +G E G+ GR TG A++ F
Sbjct: 323 --NQMIIRMRGLPFTATPQDVLGFLGPECPVTDGTE----GLLFVKYPDGRPTGDAFVLF 376
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 377 ACEEYAQNALKKHKQILGKRYIELFRSTA 405
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 33/202 (16%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A V F+ + AQ AL++HK +G RYIEL+
Sbjct: 344 FLGPECPVTDGTEGLLFVKYPDGRPTGDAFVLFACEEYAQNALKKHKQILGKRYIELFRS 403
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
++ R STP ++ L + +G
Sbjct: 404 TAAEVQQVLNR-------YMSTP----------LISTLPPPPPPMVSVPVLATPPFITTG 446
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ D C+RL+GLPY ED+ +F+ ++I P+G+ + + GR +G A+IQ +
Sbjct: 447 NTRD--CIRLRGLPYTAAIEDILEFMGEHTIDIKPHGVHMVLNQQGRPSGDAFIQM---K 501
Query: 196 NAEKALLR----HKEKIGHRLV 213
+A++A + HK+ + R V
Sbjct: 502 SADRAFMVAQKCHKKMMKDRYV 523
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 132 GAVLSGSAVD-QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
GA AVD + +R +GLP++ +D+ +F +GL I G+ + + GR G A ++
Sbjct: 212 GACSKTEAVDSETVIRARGLPWQSSDQDIARFFKGLNIAKGGVALCLNAQGRRNGEALVR 271
Query: 191 FVDKENAEKALLRHKEKIGHRLVTLVMSGAQWFL 224
F++ E+ + AL RHK +G R + + + + FL
Sbjct: 272 FINSEHRDMALDRHKHHMGSRYIEVYKATGEEFL 305
Score = 39.7 bits (91), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 36/57 (63%)
Query: 145 MRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+R+QGLPY +D+ F +G ++ + + + ++++G+ +G A + F ++ A +A+
Sbjct: 661 VRMQGLPYNAGVKDILSFFQGYQLQADSVLVLYNWSGQRSGEALVTFPSEKAARRAV 717
Score = 37.0 bits (84), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 27 IVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQR-HKSNMGDRYIELY 75
I P + ++ + GR SG+A ++ S D A Q+ HK M DRY+E++
Sbjct: 477 IKPHGVHMVLNQQGRPSGDAFIQMKSADRAFMVAQKCHKKMMKDRYVEVF 526
>sp|Q6NXG1|ESRP1_HUMAN Epithelial splicing regulatory protein 1 OS=Homo sapiens GN=ESRP1
PE=1 SV=2
Length = 681
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I L + GR +GEA V F S + ALQRHK +MG RYIE+Y
Sbjct: 242 ARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKAT 301
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT ++QFL+K
Sbjct: 302 GEDFLKIAG-GTSNE--------------VAQFLSKE----------------------- 323
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNG------ITIPHDYAGRCTGVAYIQFV 192
+Q +R++GLP+ E+V F + G +T P GR TG A++ F
Sbjct: 324 --NQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD---GRPTGDAFVLFA 378
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL +HK+ +G R + L S A
Sbjct: 379 CEEYAQNALRKHKDLLGKRYIELFRSTA 406
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 109/256 (42%), Gaps = 47/256 (18%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
IL +T GR +G+A V F+ + AQ AL++HK +G RYIEL+ ++
Sbjct: 359 ILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQV------ 412
Query: 92 GFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLP 151
+++F + + + L +Q V + D C+RL+GLP
Sbjct: 413 ----------------LNRFSSAPLIPLPTPPIIPVLPQQ-FVPPTNVRD--CIRLRGLP 453
Query: 152 YECKKEDVEKFLE--GLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR-HKEKI 208
Y ED+ FL +I +G+ + ++ GR +G A+IQ + A A + HK+ +
Sbjct: 454 YAATIEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM 513
Query: 209 GHRLVTLVMSGAQWF-------------LSPP---LTNETPISRLDLTGSPVRSTICVLC 252
R V + A+ LSPP L +P S + V T +
Sbjct: 514 KDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 573
Query: 253 HP---LTPRSVRPRSV 265
P L PR+++P +
Sbjct: 574 QPSVILNPRALQPSTA 589
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D +R +GLP++ +D+ +F +GL I G + + GR G A ++FV +E+ + A
Sbjct: 223 DNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLA 282
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + FL
Sbjct: 283 LQRHKHHMGTRYIEVYKATGEDFL 306
>sp|Q9H6T0|ESRP2_HUMAN Epithelial splicing regulatory protein 2 OS=Homo sapiens GN=ESRP2
PE=1 SV=1
Length = 727
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 87/203 (42%), Gaps = 37/203 (18%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIEL+
Sbjct: 377 FLGPECPVTGGTEGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRS 436
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGI-FCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
++ R G T + I F ++
Sbjct: 437 TAAEVQQVLNRYASGPLLPTLTAPLLPIPFPLA--------------------------P 470
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDK 194
G+ D C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ
Sbjct: 471 GTGRD--CVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSA 528
Query: 195 ENAEKALLR-HKEKIGHRLVTLV 216
E A A R HK+ + R V +V
Sbjct: 529 ERALAAAQRCHKKVMKERYVEVV 551
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 91/209 (43%), Gaps = 53/209 (25%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYM 76
++FFK + + L + GR +GEA + F VD QR ALQRHK +MG RYIE+Y
Sbjct: 274 ARFFKGLNVARGGVALCLNAQGRRNGEALIRF--VDSEQRDLALQRHKHHMGVRYIEVYK 331
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
G + G GT +++FL++
Sbjct: 332 ATGEEFVKIAG-GTS--------------LEVARFLSRE--------------------- 355
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGIT-----IPHDYAGRCTGVAYIQF 191
DQ +RL+GLP+ DV FL G E G T + H GR TG A+ F
Sbjct: 356 ----DQVILRLRGLPFSAGPTDVLGFL-GPECPVTGGTEGLLFVRHP-DGRPTGDAFALF 409
Query: 192 VDKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL RHK +G R + L S A
Sbjct: 410 ACEELAQAALRRHKGMLGKRYIELFRSTA 438
Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ +R +GLP++ +DV +F +GL + G+ + + GR G A I+FVD E + AL
Sbjct: 256 ETVVRARGLPWQSSDQDVARFFKGLNVARGGVALCLNAQGRRNGEALIRFVDSEQRDLAL 315
Query: 202 LRHKEKIGHRLVTLVMSGAQWFL 224
RHK +G R + + + + F+
Sbjct: 316 QRHKHHMGVRYIEVYKATGEEFV 338
>sp|Q9BJZ5|FUSIL_DROME RNA-binding protein fusilli OS=Drosophila melanogaster GN=fus PE=2
SV=1
Length = 967
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 77/186 (41%), Gaps = 47/186 (25%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTGGFGGVKST 99
GR +GEA + F + AL+RHK ++G RYIE+Y G
Sbjct: 317 GRRNGEALIRFVCQEHRDMALKRHKHHIGTRYIEVYRASG-------------------- 356
Query: 100 PYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQCCMRLQGLPYECKKEDV 159
FLA + ++ A LS A Q +R++GLPY+ + V
Sbjct: 357 ---------EDFLAIAGGASNEAQ---------AFLSKGA--QVIIRMRGLPYDATAKQV 396
Query: 160 EKFLEGLEIVP-------NGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKEKIGHRL 212
F + P G+ GR TG A++ F ++ +A KAL RH+E IG R
Sbjct: 397 LDFFTTGDTPPCHVLDGNEGVLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQRY 456
Query: 213 VTLVMS 218
+ L S
Sbjct: 457 IELFRS 462
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%)
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
C +R +GLP++ +D+ KF GL + G+ + GR G A I+FV +E+ + AL
Sbjct: 278 NCIVRARGLPWQSSDQDIAKFFRGLNVAKGGVALCLSPLGRRNGEALIRFVCQEHRDMAL 337
Query: 202 LRHKEKIGHRLVTLVMSGAQWFLS 225
RHK IG R + + + + FL+
Sbjct: 338 KRHKHHIGTRYIEVYRASGEDFLA 361
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 81/186 (43%), Gaps = 20/186 (10%)
Query: 32 ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSSKEANGRGTG 91
+L + GR++G+A V F++ DA +AL RH+ ++G RYIEL+ ++ R
Sbjct: 417 VLFVKKPDGRATGDAFVLFANETDAPKALGRHRESIGQRYIELFRSTTAEVQQVLNRSMD 476
Query: 92 G----FGGVKSTP--------------YGVGIFCISQFLAKWMRRAKRSEMDWALKRQGA 133
GG S P VG +S L AL
Sbjct: 477 PKNYESGGGHSQPPLIAQLPTMQLPLLPQVGAHSLSHSLGASPANLCPPVPPPALPLPTQ 536
Query: 134 VLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGL--EIVPNGITIPHDYAGRCTGVAYIQF 191
L S + C+RL+GLPYE E + FL+ I+ G+ + + G+ +G A+IQ
Sbjct: 537 HLITSGTTKNCIRLRGLPYEAMVEHILHFLDDFAKHIIYQGVHMVINAQGQPSGEAFIQM 596
Query: 192 VDKENA 197
+E+A
Sbjct: 597 DLEESA 602
>sp|B2RYJ8|ESRP2_RAT Epithelial splicing regulatory protein 2 OS=Rattus norvegicus
GN=Esrp2 PE=2 SV=1
Length = 716
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 87/206 (42%), Gaps = 47/206 (22%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEE 78
++FFK I + L + GR +GEA + F + ALQRHK +MG RYIE+Y
Sbjct: 263 ARFFKGLNIARGGVALCLNAQGRRNGEALIRFEDSEQRDLALQRHKHHMGVRYIEVYKAT 322
Query: 79 GTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGS 138
G + G GT +++FL++
Sbjct: 323 GEEFVKIAG-GTS--------------LEVARFLSRE----------------------- 344
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGIT----IPHDYAGRCTGVAYIQFVDK 194
DQ +RL+GLP+ DV FL V G+ + H GR TG A+ F +
Sbjct: 345 --DQVILRLRGLPFSAGPADVLDFLGPECPVTGGVDGLLFVRHP-DGRPTGDAFALFACE 401
Query: 195 ENAEKALLRHKEKIGHRLVTLVMSGA 220
E A+ AL RHK +G R + L S A
Sbjct: 402 ELAQAALRRHKGMLGKRYIELFRSTA 427
Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 86/202 (42%), Gaps = 35/202 (17%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIEL+
Sbjct: 366 FLGPECPVTGGVDGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRS 425
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
+ Q L ++ + L L+G
Sbjct: 426 TAAE--------------------------VQQVLNRYAASPLLPTLTAPLLPIPFPLAG 459
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ + E
Sbjct: 460 -GTGRDCVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMMSVE 518
Query: 196 NAEKALLR-HKEKIGHRLVTLV 216
A A R HK+ + R V +V
Sbjct: 519 RALAAAQRCHKKVMKERYVEVV 540
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
++ +R +GLP++ +DV +F +GL I G+ + + GR G A I+F D E + A
Sbjct: 244 NETVVRARGLPWQSSDQDVARFFKGLNIARGGVALCLNAQGRRNGEALIRFEDSEQRDLA 303
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + F+
Sbjct: 304 LQRHKHHMGVRYIEVYKATGEEFV 327
>sp|Q8K0G8|ESRP2_MOUSE Epithelial splicing regulatory protein 2 OS=Mus musculus GN=Esrp2
PE=2 SV=1
Length = 717
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 86/202 (42%), Gaps = 35/202 (17%)
Query: 23 FFKPIVPVN-----ILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME 77
F P PV +L + GR +G+A F+ + AQ AL+RHK +G RYIEL+
Sbjct: 367 FLGPECPVTGGADGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIELFRS 426
Query: 78 EGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSG 137
+ Q L ++ + L L+G
Sbjct: 427 TAAE--------------------------VQQVLNRYAASPLLPTLTAPLLPIPFPLAG 460
Query: 138 SAVDQCCMRLQGLPYECKKEDVEKFL--EGLEIVPNGITIPHDYAGRCTGVAYIQFVDKE 195
+ C+RL+GLPY ED+ FL +I P+G+ + + GR +G A+IQ + E
Sbjct: 461 -GTGRDCVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMMSVE 519
Query: 196 NAEKALLR-HKEKIGHRLVTLV 216
A A R HK+ + R V +V
Sbjct: 520 RALAAAQRCHKKMMKERYVEVV 541
Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 90/208 (43%), Gaps = 51/208 (24%)
Query: 21 SQFFK--PIVPVNILLLTDDAGRSSGEADVEFSSVDDAQR--ALQRHKSNMGDRYIELYM 76
++FFK I + L + GR +GEA + F VD QR ALQRHK +MG RYIE+Y
Sbjct: 264 ARFFKGLNIARGGVALCLNAQGRRNGEALIRF--VDSEQRDLALQRHKHHMGVRYIEVYK 321
Query: 77 EEGTSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLS 136
G + G GT +++FL++
Sbjct: 322 ATGEEFVKIAG-GTS--------------LEVARFLSRE--------------------- 345
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIV----PNGITIPHDYAGRCTGVAYIQFV 192
DQ +RL+GLP+ DV FL G E +G+ GR TG A+ F
Sbjct: 346 ----DQVILRLRGLPFSAGPTDVLGFL-GPECPVTGGADGLLFVRHPDGRPTGDAFALFA 400
Query: 193 DKENAEKALLRHKEKIGHRLVTLVMSGA 220
+E A+ AL RHK +G R + L S A
Sbjct: 401 CEELAQAALRRHKGMLGKRYIELFRSTA 428
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
++ +R +GLP++ +DV +F +GL I G+ + + GR G A I+FVD E + A
Sbjct: 245 NETVVRARGLPWQSSDQDVARFFKGLNIARGGVALCLNAQGRRNGEALIRFVDSEQRDLA 304
Query: 201 LLRHKEKIGHRLVTLVMSGAQWFL 224
L RHK +G R + + + + F+
Sbjct: 305 LQRHKHHMGVRYIEVYKATGEEFV 328
>sp|A8WPC5|SYM2_CAEBR RNA-binding protein sym-2 OS=Caenorhabditis briggsae GN=sym-2 PE=3
SV=2
Length = 634
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 37/180 (20%)
Query: 23 FFKPI-VPVNILLLTDDAGRSSGEAD--VEFSSVDDAQRALQRHKSNMGDRYIELYMEEG 79
FF+P+ + IL +T GR +G D V+F + +DAQ+ L +H+ +G RYIEL+
Sbjct: 304 FFEPLKLTEKILFITRTDGRPTGNCDAFVQFETEEDAQQGLLKHRQVIGQRYIELFKSTA 363
Query: 80 TSSKEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA 139
++ R + S P +A + + + D
Sbjct: 364 AEVQQVVKRC----NLINSAP----------VVANAVEVSDEKKKD-------------- 395
Query: 140 VDQCCMRLQGLPYECKKEDVEKFLEGLE--IVPNGITIPHDYAGRCTGVAYIQFVDKENA 197
C+RL+GLPYE + + FL + G+ + ++ G +G A+IQ + ++ A
Sbjct: 396 ----CVRLRGLPYEATVQHIVNFLGDFANMVKFQGVHMVYNNQGNPSGEAFIQMISEQAA 451
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGV--AYIQFVDKEN 196
+ + +R++GLPY+C + F E L++ + I GR TG A++QF +E+
Sbjct: 281 SANAVIVRMRGLPYDCTDTQIRAFFEPLKLTEKILFITRT-DGRPTGNCDAFVQFETEED 339
Query: 197 AEKALLRHKEKIGHRLVTLVMSGA 220
A++ LL+H++ IG R + L S A
Sbjct: 340 AQQGLLKHRQVIGQRYIELFKSTA 363
>sp|Q5RFT7|RB12B_PONAB RNA-binding protein 12B OS=Pongo abelii GN=RBM12B PE=2 SV=1
Length = 761
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 97/250 (38%), Gaps = 39/250 (15%)
Query: 44 GEADVEFSSVDDAQRALQRHKSNMGDRYIELY------MEEGTSSKEAN--GRGTGGFGG 95
GEA + F++ +DA+RA+ R + D +EL+ M++ K + GRG G G
Sbjct: 41 GEAFIIFATDEDARRAISRSGGFIKDSSVELFLSSKAEMQKTIEMKRTDRVGRGRPGSG- 99
Query: 96 VKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA--------------VD 141
G+ +S + A S ++ + S +
Sbjct: 100 ------TSGVGSLSNIIESVKEEASNSGYGSSINQDAGFHSNGTGHGNLRPRKTRPLKAE 153
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ L+GLPY ++DV F GL + +G+ + GR G A ++F +A L
Sbjct: 154 NPYLFLRGLPYLVNEDDVRVFFSGLCV--DGVIFLKHHDGRNNGDAIVKFASCVDASGGL 211
Query: 202 LRHKEKIGHRLVTLVMSGA--QWF-LSPPLTNETPISRLDLTGSPVRST----ICVLCHP 254
H+ +G R + VM G+ QW E + R SP R H
Sbjct: 212 KCHRSFMGSRFIE-VMQGSEQQWIEFGGNAVKEGDVLRRSEEHSPPRGINDRHFRKRSHS 270
Query: 255 LTPRSVRPRS 264
+PR R RS
Sbjct: 271 KSPRRTRSRS 280
Score = 39.7 bits (91), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
G++ + C+ ++ P++ K +V+KF + + I + +D G G A ++F +E
Sbjct: 394 GNSGQKLCIYIRNFPFDVTKVEVQKFFADFLLAEDDIYLLYDDKGVGLGEALVKFKSEEQ 453
Query: 197 AEKA-LLRHKEKIGHRLVTLVMSGAQ 221
A KA L + +G ++ ++S AQ
Sbjct: 454 AMKAERLNRRRFLGTEVLLRLISEAQ 479
Score = 38.9 bits (89), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIEL 74
FF + ++ L GR++G+A V+F+S DA L+ H+S MG R+IE+
Sbjct: 174 FFSGLCVDGVIFLKHHDGRNNGDAIVKFASCVDASGGLKCHRSFMGSRFIEV 225
>sp|Q8IXT5|RB12B_HUMAN RNA-binding protein 12B OS=Homo sapiens GN=RBM12B PE=1 SV=2
Length = 1001
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 34/203 (16%)
Query: 44 GEADVEFSSVDDAQRALQRHKSNMGDRYIELY------MEEGTSSKEAN--GRGTGGFGG 95
GEA + F++ +DA+RA+ R + D +EL+ M++ K + GRG G G
Sbjct: 41 GEAFIIFATDEDARRAISRSGGFIKDSSVELFLSSKAEMQKTIEMKRTDRVGRGRPGSG- 99
Query: 96 VKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSA--------------VD 141
G+ +S F+ A S ++ + + +
Sbjct: 100 ------TSGVDSLSNFIESVKEEASNSGYGSSINQDAGFHTNGTGHGNLRPRKTRPLKAE 153
Query: 142 QCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKAL 201
+ L+GLPY ++DV F GL + +G+ + GR G A ++F +A L
Sbjct: 154 NPYLFLRGLPYLVNEDDVRVFFSGLCV--DGVIFLKHHDGRNNGDAIVKFASCVDASGGL 211
Query: 202 LRHKEKIGHRLVTLVMSGA--QW 222
H+ +G R + VM G+ QW
Sbjct: 212 KCHRSFMGSRFIE-VMQGSEQQW 233
Score = 38.1 bits (87), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 131 QGAVLSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQ 190
Q G++ + C+ ++ P++ K +V+KF + + I + +D G G A ++
Sbjct: 388 QKYSQEGNSGQKLCIYIRNFPFDVTKVEVQKFFADFLLAEDDIYLLYDDKGVGLGEALVK 447
Query: 191 FVDKENAEKA-LLRHKEKIGHRLVTLVMSGAQ 221
F +E A KA L + +G ++ ++S AQ
Sbjct: 448 FKSEEQAMKAERLNRRRFLGTEVLLRLISEAQ 479
Score = 36.2 bits (82), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIEL 74
FF + ++ L GR++G+A V+F+S DA L+ H+S MG R+IE+
Sbjct: 174 FFSGLCVDGVIFLKHHDGRNNGDAIVKFASCVDASGGLKCHRSFMGSRFIEV 225
Score = 35.0 bits (79), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+++ LP++ ++ F G I+P+ ++I ++ G TG A + ++ A A+
Sbjct: 925 TPIKIMNLPFKANVNEILDFFHGYRIIPDSVSIQYNEQGLPTGEAIVAMINYNEAMAAIK 984
Query: 203 RHKEK-IGHRLVTLVM 217
++ +G R V L +
Sbjct: 985 DLNDRPVGPRKVKLTL 1000
>sp|Q66JV4|R12BB_MOUSE RNA-binding protein 12B-B OS=Mus musculus GN=Rbm12b2 PE=1 SV=2
Length = 834
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 23/201 (11%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYME---EGTSSKEANGRGTGGFGGV 96
G GEA + F++ +DA+RA+ R + D +EL++ E + E G G
Sbjct: 37 GGKVGEAFIIFATDEDARRAISRSGGFIKDSSVELFLSSKVEMQKTIEMKRTARVGRGRP 96
Query: 97 KSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQ-GAVLSGSAVD------------QC 143
S GVG + F S ++ R G +G+ +D
Sbjct: 97 GSGASGVG--NVYHFSDALKEEESYSGYGSSVNRDAGFHTNGTGLDLRPRKTRPLKAENP 154
Query: 144 CMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+ L+GLPY ++DV F GL + +G+ + + GR G A ++F +A L
Sbjct: 155 YLFLRGLPYLVNEDDVRVFFSGLCV--DGVILLKHHDGRNNGDAIVKFASCVDASGGLKC 212
Query: 204 HKEKIGHRLVTLVMSGA--QW 222
H+ +G R + VM G+ QW
Sbjct: 213 HRSFMGSRFIE-VMQGSEQQW 232
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 80/193 (41%), Gaps = 11/193 (5%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF + ++LL GR++G+A V+F+S DA L+ H+S MG R+IE+ +G+
Sbjct: 173 FFSGLCVDGVILLKHHDGRNNGDAIVKFASCVDASGGLKCHRSFMGSRFIEVM--QGSEQ 230
Query: 83 KEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQ 142
+ GT GG + + R+ S+ A R
Sbjct: 231 QWIEFGGTATEGGDTPRMRSEEHSPSRRINGRHFRKRSHSKSPRARSRSPLGF------- 283
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+ L+ L K D+ ++ + I + R T A++ F ++++ AL
Sbjct: 284 -YVHLKNLSLNTNKRDLRNLFRDTDLTNDQIKFVYK-DERRTRYAFVMFKNQKDYNTALG 341
Query: 203 RHKEKIGHRLVTL 215
HK + +R V +
Sbjct: 342 LHKTVLQYRPVLI 354
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 135 LSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDK 194
SGS + C+ ++ LP++ K +V+KF +V + I + D G G A ++F +
Sbjct: 394 FSGSG-QKLCIYIRNLPFDVTKGEVQKFFADFSLVEDDIYLLCDDKGVGLGEALVRFKSE 452
Query: 195 ENAEKA 200
E A KA
Sbjct: 453 EQAMKA 458
Score = 36.2 bits (82), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RL GLP+ D+ F +GL I G+ I G G A+I F E+A +A+
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFKGLTIPDGGVHI----IGGKVGEAFIIFATDEDARRAIS 58
Query: 203 RHKEKIGHRLVTLVMS 218
R I V L +S
Sbjct: 59 RSGGFIKDSSVELFLS 74
>sp|Q80YR9|R12BA_MOUSE RNA-binding protein 12B-A OS=Mus musculus GN=Rbm12b1 PE=1 SV=2
Length = 836
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 19/199 (9%)
Query: 40 GRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS-SKEANGRGTGGFGGVKS 98
G GEA + F++ +DA+RA+ R + D +EL++ K + T G +
Sbjct: 37 GGKVGEAFIIFATDEDARRAISRSGGFIKDSSVELFLSSKVEMQKTIEMKRTARVGRGRP 96
Query: 99 TPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQ-GAVLSGSAVD------------QCCM 145
G+ + F S ++ R G +G+ +D +
Sbjct: 97 GSGASGVGNVYHFSDALKEEESYSGYGSSVNRDAGFHTNGTGLDLRPRKTRPLKAENPYL 156
Query: 146 RLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHK 205
L+GLPY ++DV F GL + +G+ + + GR G A ++F +A L H+
Sbjct: 157 FLRGLPYLVNEDDVRVFFSGLCV--DGVILLKHHDGRNNGDAIVKFASCVDASGGLKCHR 214
Query: 206 EKIGHRLVTLVMSGA--QW 222
+G R + VM G+ QW
Sbjct: 215 SFMGSRFIE-VMQGSEQQW 232
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 80/193 (41%), Gaps = 11/193 (5%)
Query: 23 FFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTSS 82
FF + ++LL GR++G+A V+F+S DA L+ H+S MG R+IE+ +G+
Sbjct: 173 FFSGLCVDGVILLKHHDGRNNGDAIVKFASCVDASGGLKCHRSFMGSRFIEVM--QGSEQ 230
Query: 83 KEANGRGTGGFGGVKSTPYGVGIFCISQFLAKWMRRAKRSEMDWALKRQGAVLSGSAVDQ 142
+ GT GG + + R+ S+ A R
Sbjct: 231 QWIEFGGTATEGGDTPRMRSEEHSPSRRINGRHFRKRSHSKSPRARSRSPLGF------- 283
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+ L+ L K D+ ++ + I + R T A++ F ++++ AL
Sbjct: 284 -YVHLKNLSLNTNKRDLRNLFRDTDLTNDQIKFVYK-DERRTRYAFVMFKNQKDYNTALG 341
Query: 203 RHKEKIGHRLVTL 215
HK + +R V +
Sbjct: 342 LHKTVLQYRPVLI 354
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 135 LSGSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDK 194
SGS + C+ ++ LP++ K +V+KF +V + I + D G G A ++F +
Sbjct: 394 FSGSG-QKLCIYIRNLPFDVTKGEVQKFFADFSLVEDDIYLLCDDKGVGLGEALVRFKSE 452
Query: 195 ENAEKA 200
E A KA
Sbjct: 453 EQAMKA 458
Score = 36.2 bits (82), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 143 CCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALL 202
+RL GLP+ D+ F +GL I G+ I G G A+I F E+A +A+
Sbjct: 3 VVIRLLGLPFIAGPVDIRHFFKGLTIPDGGVHI----IGGKVGEAFIIFATDEDARRAIS 58
Query: 203 RHKEKIGHRLVTLVMS 218
R I V L +S
Sbjct: 59 RSGGFIKDSSVELFLS 74
>sp|Q9Y4C8|RBM19_HUMAN Probable RNA-binding protein 19 OS=Homo sapiens GN=RBM19 PE=1 SV=3
Length = 960
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 41/69 (59%)
Query: 22 QFFKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQRHKSNMGDRYIELYMEEGTS 81
+F P+ PV I ++ + G +G V+FS+ ++ ++AL+ ++ MG RYIE++ E+
Sbjct: 312 EFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGRYIEVFREKNVP 371
Query: 82 SKEANGRGT 90
+ + + T
Sbjct: 372 TTKGAPKNT 380
>sp|Q10021|RSP5_CAEEL Probable splicing factor, arginine/serine-rich 5 OS=Caenorhabditis
elegans GN=rsp-5 PE=3 SV=3
Length = 208
Score = 36.2 bits (82), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 16/78 (20%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLRHKE 206
L +PY ++ DVE+FL+G + N I++ + G A++ F D +AE A
Sbjct: 6 LGKIPYNARERDVERFLKGYGKI-NNISMKY-------GFAFVDFEDSRDAEDAC----- 52
Query: 207 KIGHRLVTLVMSGAQWFL 224
H L M G+ L
Sbjct: 53 ---HDLDGKTMEGSSMRL 67
>sp|Q9SEU4|SR33_ARATH Serine/arginine-rich splicing factor 33 OS=Arabidopsis thaliana
GN=SR33 PE=1 SV=1
Length = 287
Score = 35.4 bits (80), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDY-AGRCTGVAYIQFVDKENAEKA 200
++ L ++C++ED+ K E V + I +P DY G G ++QF+D +A A
Sbjct: 40 VRNLRHDCRQEDLRKSFEQFGPVKD-IYLPRDYYTGDPRGFGFVQFMDPADAADA 93
>sp|Q6CEW9|MRD1_YARLI Multiple RNA-binding domain-containing protein 1 OS=Yarrowia
lipolytica (strain CLIB 122 / E 150) GN=MRD1 PE=3 SV=1
Length = 828
Score = 35.4 bits (80), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 139 AVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAE 198
A+D + ++ LP+E K+DV+K + + +P + G A+ ++V + AE
Sbjct: 700 AIDSKIL-IKNLPFEATKKDVQKLFGAFGSLKT-VRVPKKFNSESRGFAFAEYVSAKEAE 757
Query: 199 KAL--LRHKEKIGHRLVTLVMSGAQWFLSPPLTNETPISRLDLTGS 242
A+ L+ +G RLV Q+ + E I R+ T S
Sbjct: 758 HAMSALQGTHLLGRRLVL------QYAQADASNAEEEIERMQATVS 797
>sp|Q15020|SART3_HUMAN Squamous cell carcinoma antigen recognized by T-cells 3 OS=Homo
sapiens GN=SART3 PE=1 SV=1
Length = 963
Score = 35.0 bits (79), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+ GLP+ C KE++E+ + V + + + + AG+ G+AY+++ ++ A +A+++
Sbjct: 805 ISGLPFSCTKEELEEICKAHGTVKD-LRLVTNRAGKPKGLAYVEYENESQASQAVMK 860
>sp|Q5REG1|SART3_PONAB Squamous cell carcinoma antigen recognized by T-cells 3 OS=Pongo
abelii GN=SART3 PE=2 SV=1
Length = 981
Score = 35.0 bits (79), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 15/67 (22%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 137 GSAVDQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKEN 196
+++++ + + GLP+ C KE++E+ + V + + + + AG+ G+AY+++ ++
Sbjct: 813 STSLEKHKLFISGLPFSCTKEELEEICKAHGTVKD-LRLVTNRAGKPKGLAYVEYENESQ 871
Query: 197 AEKALLR 203
A +A+++
Sbjct: 872 ASQAVMK 878
>sp|Q9JLI8|SART3_MOUSE Squamous cell carcinoma antigen recognized by T-cells 3 OS=Mus
musculus GN=Sart3 PE=2 SV=1
Length = 962
Score = 35.0 bits (79), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 147 LQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKALLR 203
+ GLP+ C KE++E + V + + + + AG+ G+AY+++ ++ A +A+++
Sbjct: 805 ISGLPFSCTKEELEDICKAHGTVKD-LRLVTNRAGKPKGLAYVEYENESQASQAVMK 860
>sp|P20397|NUCL_XENLA Nucleolin OS=Xenopus laevis GN=ncl PE=2 SV=3
Length = 651
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 141 DQCCMRLQGLPYECKKEDVEKFLEGLEIVPNGITIPHDYAGRCTGVAYIQFVDKENAEKA 200
D + ++ +PY E++++ E + I IP G G+AY++F +++ A KA
Sbjct: 323 DSRTLFVKNIPYSTTVEELQEIFENAK----DIRIPTGKDGSNKGIAYVEFSNEDEANKA 378
Query: 201 L 201
L
Sbjct: 379 L 379
>sp|P23246|SFPQ_HUMAN Splicing factor, proline- and glutamine-rich OS=Homo sapiens
GN=SFPQ PE=1 SV=2
Length = 707
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 4 SFYVIDILIHITYCLLCSQF--FKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQ 61
+ V ++ +++ LL F F PI +++ DD GRS+G+ VEF+S A++A +
Sbjct: 372 ALSVRNLSPYVSNELLEEAFSQFGPIE--RAVVIVDDRGRSTGKGIVEFASKPAARKAFE 429
Query: 62 R 62
R
Sbjct: 430 R 430
>sp|Q5ZK88|PSPC1_CHICK Paraspeckle component 1 OS=Gallus gallus GN=PSPC1 PE=2 SV=1
Length = 523
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 7 VIDILIHITYCLLCSQFFKPIVPVN-ILLLTDDAGRSSGEADVEFSSVDDAQRALQR 62
+ L + L Q F PV +++ DD GR++G+ VEF++ A++AL+R
Sbjct: 158 TVKNLSPVVSNELLEQAFSQFGPVERAVVVVDDRGRATGKGFVEFAAKPPARKALER 214
>sp|Q8VIJ6|SFPQ_MOUSE Splicing factor, proline- and glutamine-rich OS=Mus musculus
GN=Sfpq PE=1 SV=1
Length = 699
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 4 SFYVIDILIHITYCLLCSQF--FKPIVPVNILLLTDDAGRSSGEADVEFSSVDDAQRALQ 61
+ V ++ +++ LL F F PI +++ DD GRS+G+ VEF+S A++A +
Sbjct: 364 ALSVRNLSPYVSNELLEEAFSQFGPIE--RAVVIVDDRGRSTGKGIVEFASKPAARKAFE 421
Query: 62 R 62
R
Sbjct: 422 R 422
>sp|Q4KLH4|PSPC1_RAT Paraspeckle component 1 OS=Rattus norvegicus GN=Pspc1 PE=2 SV=1
Length = 522
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 7 VIDILIHITYCLLCSQFFKPIVPV-NILLLTDDAGRSSGEADVEFSSVDDAQRALQR 62
+ L + L Q F PV +++ DD GR++G+ VEF++ A++AL+R
Sbjct: 158 TVKNLSPVVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVEFAAKPPARKALER 214
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 118,950,655
Number of Sequences: 539616
Number of extensions: 5065188
Number of successful extensions: 12959
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 12633
Number of HSP's gapped (non-prelim): 301
length of query: 304
length of database: 191,569,459
effective HSP length: 117
effective length of query: 187
effective length of database: 128,434,387
effective search space: 24017230369
effective search space used: 24017230369
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)