BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1047
(127 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|345497484|ref|XP_001600457.2| PREDICTED: fat-like cadherin-related tumor suppressor homolog
[Nasonia vitripennis]
Length = 4817
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 67/112 (59%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++APVF+DFV A+V ENQP+ TLV +KA DADPPG +S+I YS+RGGDG+G F+ID+E
Sbjct: 1118 LHAPVFNDFVISASVSENQPLNTLVTQVKAKDADPPGGDSRIGYSIRGGDGVGLFSIDDE 1177
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G NI +LD E A GY LT+ A D G P
Sbjct: 1178 G---------------------NIRTKAVLDVE-AKAGYWLTVYAQDHGVVP 1207
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 43/59 (72%), Gaps = 5/59 (8%)
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
P HFR+ P PG EY+I VLKLLDRE AP GYNLTLRAVD+GTPPR +YK+ P
Sbjct: 358 PDGHFRVRPLPT-PG----EYSIQVLKLLDREAAPQGYNLTLRAVDRGTPPRFSYKSVP 411
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 57/110 (51%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS Y AT+ E+ +GTLV + A D D G+N KI Y +D+
Sbjct: 3211 NAPRFSMQSYSATLPEDVEVGTLVTKVHATD-DDIGINRKIRYEF----------LDSAN 3259
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+HF I P D G + + K LDRE + YN++++A+D+GTP
Sbjct: 3260 --DHFVISP---DSGI------VTLAKPLDRETKAM-YNVSIQAMDQGTP 3297
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 53/116 (45%), Gaps = 24/116 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS Y+A+++E+ G V+ + A D D N ++SYS+ GD FTID++
Sbjct: 3420 NAPMFSQASYRASIREDAKAGEKVVQVFANDLD-SNENGQVSYSIERGDRQKQFTIDSQS 3478
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE-IAPLGYNLTLRAVDKGTPPRETY 116
I VL LDRE IA Y L + A D G P Y
Sbjct: 3479 G--------------------QITVLAPLDREQIA--SYVLEVHAKDNGIPTLSNY 3512
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 55/111 (49%), Gaps = 21/111 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDNEG 61
P FS Y ++ E GT ++ L A D D G+NSKI Y++ R D LG T+D
Sbjct: 2373 PEFSQDSYNISISEAALFGTELLRLVARDND-TGINSKIRYAIENRTADELGENTLD--- 2428
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKL-LDREIAPLGYNLTLRAVDKGTP 111
L H +DP E IV LK LD E A ++ T+ A+D+G P
Sbjct: 2429 -LFH-------VDP-----EEGIVYLKRSLDHETAD-SHHFTVVAMDRGVP 2465
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 50/108 (46%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS +Y V E P+ + VI LK +DAD G N+ + + GG+ G F I+ +
Sbjct: 420 NAPIFSTEIYDVKVPETAPVNSPVIRLKVSDAD-QGKNALVFLEIVGGNEGGEFYINADT 478
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ + VP LD E Y LT+ AVD+G
Sbjct: 479 GM-LYTAVP-------------------LDAETKAF-YTLTVSAVDQG 505
Score = 41.6 bits (96), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F + Q V E PIGT V+ + A D D G N+++SYS+ G+ F+ID
Sbjct: 1641 HAPTFISEIIQGKVFETSPIGTAVVQVIAIDRD-RGENAQLSYSMTSGNVGNVFSIDP-- 1697
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
D GT I V + LD A Y L ++A D G+P
Sbjct: 1698 ------------DLGT------IRVARELDLATAS-EYILLVKATDHGSP 1728
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++AP F DF + V E+ PIG ++ L A D D G N K+ Y + GD F ID
Sbjct: 791 VHAPEFLDFPNEIRVNESAPIGFVLARLAARDRD-LGYNGKLVYGISAGDSDSVFGID 847
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y A V E +GT V + A D G+N+ + Y++ GG+ F ID +
Sbjct: 3315 NPPEFTSKYYFARVPEIDAVGTEVARVLATSKDT-GVNADVYYTIVGGNEHKKFEIDTKS 3373
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ + + + LD E A Y LT++A+D G PP
Sbjct: 3374 GV--------------------VSIAEQLDYERAK-DYFLTIQAIDGGVPP 3403
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 44/111 (39%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ Y V+E++P+G V+ DAD + ++ R G+ F ++ +G
Sbjct: 3525 NPPLFAQNNYTTVVQEDKPLGYAVLKFTVTDADAEPNAAPYTFDFRSGNEGDAFRLEQDG 3584
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L TK K K Y L +R D G+PP
Sbjct: 3585 TLR----TATKFSNRVKDK------------------YLLHIRVFDNGSPP 3613
>gi|350417212|ref|XP_003491311.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog,
partial [Bombus impatiens]
Length = 4739
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 67/112 (59%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++APVF DFV A+V ENQPIGTLV T++A DADP G +S+I Y++RGGDG+G F+IDNE
Sbjct: 1089 LHAPVFDDFVVSASVFENQPIGTLVTTVRAKDADPLGGDSRIGYTIRGGDGIGIFSIDNE 1148
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G NI +LD E + GY LT+ A D G P
Sbjct: 1149 G---------------------NIKTKVMLDVE-SKRGYWLTVYAQDHGVVP 1178
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 50/94 (53%), Gaps = 16/94 (17%)
Query: 28 LKAADADPPGMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVV 86
++ D D G++ +I S + GGD P HFR+ P G EYNI V
Sbjct: 311 VRVVDNDE-GIHGQIASLDIVGGD-----------PAGHFRVRPAG---GPHSGEYNIEV 355
Query: 87 LKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
L LLDRE A GYNLTLRA D+G P R +YK P
Sbjct: 356 LHLLDRETAVQGYNLTLRATDRGVPQRYSYKFVP 389
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 56/112 (50%), Gaps = 27/112 (24%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP F+ Y AT+ E+ +GTLV + A D D G+N KI Y + DG
Sbjct: 3168 NAPKFTMQTYSATLPEDVEVGTLVTKVHATDND-IGINRKIRYEFIDSADG--------- 3217
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVL-KLLDREIAPLGYNLTLRAVDKGTP 111
HF + D G IV L K LDRE + YN+T++AVD+GTP
Sbjct: 3218 ----HFLVAA---DSG-------IVTLGKPLDRETKAM-YNVTIQAVDQGTP 3254
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS +Y+ V E PI T VI LK DAD G N+ + + GG+ G F ++ E
Sbjct: 398 NAPVFSREIYEVKVPETAPINTPVIRLKVTDAD-EGKNALVFLEIVGGNEGGEFYVNAET 456
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ + T ++ +KK + Y LT+ AVD+G
Sbjct: 457 GM-----LYTAVNLDAEKKAF----------------YTLTVSAVDQG 483
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 24/116 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS+ Y+A+++E+ IG V + A D D N +SY + GD F+ID
Sbjct: 3377 NAPIFSEVSYRASIREDAKIGEKVTQVFANDLDSE-ENGNVSYYIERGDRQKQFSID--- 3432
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVDKGTPPRETY 116
+K I V LDRE +G Y L + A D G P ++
Sbjct: 3433 -----------------EKTGQITVAASLDRE--EIGNYVLEVHARDSGIPRLSSF 3469
Score = 42.0 bits (97), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 17/126 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F + + EN+P GT V+ + A D D G N+ ISYS+ + +
Sbjct: 505 NDPTFEQSEMEVWIDENEPAGTSVVKITAKDRD-SGENAYISYSIDNIQKVPF------- 556
Query: 62 PLNHFR-IVPTK--IDPGTKKKEYNIVVLKLLD-----REIAPLGYNLTLRAVDKGTPPR 113
++HF IV TK +D T K+EY ++ +++ D R A + ++ +R V+ P
Sbjct: 557 EIDHFSGIVKTKQVLDYETMKREY-LLHVRVSDWGLPYRRQAEMQLHVKVRDVNDNRPQF 615
Query: 114 ETYKAT 119
E T
Sbjct: 616 ERIDCT 621
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y A V+E++P+G V+ DAD + ++ R G+ F ++ +G
Sbjct: 3482 NPPLFSLSNYTAVVQEDKPLGHTVLQFVVTDADIEPNAAPYTFDFRSGNEGDAFRLEQDG 3541
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L TK + K K Y L +R D G+PP
Sbjct: 3542 TLR----TATKFNNRVKDK------------------YELHIRVFDNGSPP 3570
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
+AP F + Q V E PIG V+ + A D D G N+KI+YS+ G+ F ID
Sbjct: 1611 HAPEFISEIIQGKVYETSPIGAAVVQVYAIDRD-RGDNAKITYSITSGNVGNMFAID 1666
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ VY + V E +GT V + A D G+N+ + YS+ GG+ F ID
Sbjct: 3272 NPPEFASKVYFSKVPEIYAVGTEVARVLATSKD-TGVNADVYYSIVGGNEHKKFQIDARS 3330
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I + + LD E A Y LT++A+D G PP
Sbjct: 3331 GV--------------------ITIAEQLDFERAR-DYFLTIQAIDGGIPP 3360
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 24/121 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-N 59
++AP F DF + E+ IGT ++ ++A D D N K+ + + GD F ID +
Sbjct: 768 IHAPEFVDFPSEIKANESVKIGTTLVKIRARDRD-LDYNGKLVFCISSGDRDSVFGIDPD 826
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
G LN V+ LDRE Y L + D G P + K
Sbjct: 827 TGDLN---------------------VIGYLDRERES-EYFLNISVYDLGKPQKSASKML 864
Query: 120 P 120
P
Sbjct: 865 P 865
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F D Y+A V E+ GT+V+ L D D +N+ I + + GD F I + G
Sbjct: 2963 NPPAFVDDRYEAAVNEDALPGTVVVKLITMDKD-SDVNTPIEFYITSGDSRSQFQIRSTG 3021
Query: 62 PL 63
+
Sbjct: 3022 EV 3023
>gi|189234730|ref|XP_973752.2| PREDICTED: similar to fat2 CG7749-PA [Tribolium castaneum]
Length = 4676
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 79/151 (52%), Gaps = 32/151 (21%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
M+AP+FSD V TVKENQP+GT+V+ + A DADPPG +S I YS+RGGDG+G F+IDNE
Sbjct: 1060 MHAPLFSDMVLNGTVKENQPVGTVVMQVNATDADPPGGDSNIEYSIRGGDGIGIFSIDNE 1119
Query: 61 GPL-----------NHFRIVPTKIDPGT----KKKEYNIVVLKLLDR------------- 92
G + +HF + D G E I VL D
Sbjct: 1120 GIIRTLAVLDIETKSHFWLTVFAQDHGVVPLYSSVEVYIEVLNENDNVPLSDEAVYYPTI 1179
Query: 93 -EIAPLGYN-LTLRAVDKGTPPRE--TYKAT 119
E +P G + L +RA DK P + TYK T
Sbjct: 1180 LEDSPAGSSVLQIRASDKDKDPNQKITYKIT 1210
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 42/59 (71%), Gaps = 5/59 (8%)
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
P HFRI PTK +K E+NI VLKLLDRE P GY L LRAVD+G PPRE+YK+ P
Sbjct: 308 PDGHFRIRPTK-----QKGEFNIEVLKLLDRESTPQGYTLKLRAVDRGVPPRESYKSVP 361
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 59/110 (53%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y ++ E+ +GTLV + A DAD G+N KI Y+ ID+
Sbjct: 3157 NPPVFSLPFYSVSLPEDVEVGTLVTKIHATDAD-IGINRKIKYAF----------IDSFN 3205
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
NHF++ D G + + K LDREI + YNLT++AVD+GTP
Sbjct: 3206 --NHFKMAS---DSGI------VTLAKPLDREIRAV-YNLTVQAVDQGTP 3243
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y A ++E+ IG ++ + A D D N K++YS+ GD F ID
Sbjct: 3366 NAPVFSQLSYSARIREDAQIGDKILQVIATDLD-SDRNGKVTYSIIRGDDREQFEID--- 3421
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
P + + V ++D T VL++L R+
Sbjct: 3422 PDSGYVSVAEELDRETTSN----YVLEVLARD 3449
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F++ Y A V E +GT V+ + A D G+N+ ++YS+ GG+ F I+N+
Sbjct: 3261 NPPEFANKYYFAVVPEIDAVGTEVVKVLATSKD-TGVNADVTYSIIGGNEHKKFAINNKT 3319
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I + +LD E A Y LT++AVD G PP
Sbjct: 3320 GV--------------------ISIADMLDYERAK-DYFLTIQAVDGGIPP 3349
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ +Y+ V E P+ T +I LK DAD G N+++ + GG+ G F I+ E
Sbjct: 370 NAPVFNKEIYEVKVPETAPVNTPLIRLKVTDAD-EGRNAQVFLEIVGGNEGGEFNINPET 428
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ + T + + K++ Y+LT+ A+D+G
Sbjct: 429 GM-----LYTAVPLDAESKQF----------------YSLTVSAIDQG 455
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 51/120 (42%), Gaps = 22/120 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+ +P F DF + V E+ +GT ++ LKA D D G N K+ Y + GGD F +D
Sbjct: 740 LKSPEFIDFPAEIKVNESVALGTTLVKLKARDRD-LGYNGKLIYGISGGDKHSQFCVD-- 796
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
+D G K V+ LDRE Y L + D G P + + P
Sbjct: 797 ------------MDTGELK------VIGYLDRERES-EYFLNITLYDLGKPQKSASRMLP 837
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ Y ++E++PIG +I K DAD ++ R G+ F ++ +G
Sbjct: 3471 NPPIFAQTNYTTVIQEDKPIGYPIIQFKITDADTAPNTEPYTFDFRSGNDGNSFRLEEDG 3530
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPL 97
++ T K K+ ++ +++ D I PL
Sbjct: 3531 ------VLRTATKFNHKIKDNYLLQIRVFDNGIPPL 3560
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR--GGDGLGYFTID-NE 60
P F+ Y ++ E GT V+T+ A D D G+N KISYS++ + YF ID NE
Sbjct: 2327 PEFTQENYNVSISEAAQFGTPVLTVIANDND-TGINKKISYSIQNDSSNSSEYFYIDENE 2385
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLL 90
G + + +D + IVV K L
Sbjct: 2386 GVV----YLKQALDHEEASSHHFIVVAKDL 2411
>gi|270002748|gb|EEZ99195.1| cadherin [Tribolium castaneum]
Length = 4637
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 79/151 (52%), Gaps = 32/151 (21%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
M+AP+FSD V TVKENQP+GT+V+ + A DADPPG +S I YS+RGGDG+G F+IDNE
Sbjct: 1060 MHAPLFSDMVLNGTVKENQPVGTVVMQVNATDADPPGGDSNIEYSIRGGDGIGIFSIDNE 1119
Query: 61 GPL-----------NHFRIVPTKIDPGT----KKKEYNIVVLKLLDR------------- 92
G + +HF + D G E I VL D
Sbjct: 1120 GIIRTLAVLDIETKSHFWLTVFAQDHGVVPLYSSVEVYIEVLNENDNVPLSDEAVYYPTI 1179
Query: 93 -EIAPLGYN-LTLRAVDKGTPPRE--TYKAT 119
E +P G + L +RA DK P + TYK T
Sbjct: 1180 LEDSPAGSSVLQIRASDKDKDPNQKITYKIT 1210
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 42/59 (71%), Gaps = 5/59 (8%)
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
P HFRI PTK +K E+NI VLKLLDRE P GY L LRAVD+G PPRE+YK+ P
Sbjct: 308 PDGHFRIRPTK-----QKGEFNIEVLKLLDRESTPQGYTLKLRAVDRGVPPRESYKSVP 361
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 59/110 (53%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y ++ E+ +GTLV + A DAD G+N KI Y+ ID+
Sbjct: 3118 NPPVFSLPFYSVSLPEDVEVGTLVTKIHATDAD-IGINRKIKYAF----------IDSFN 3166
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
NHF++ D G + + K LDREI + YNLT++AVD+GTP
Sbjct: 3167 --NHFKMAS---DSGI------VTLAKPLDREIRAV-YNLTVQAVDQGTP 3204
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y A ++E+ IG ++ + A D D N K++YS+ GD F ID
Sbjct: 3327 NAPVFSQLSYSARIREDAQIGDKILQVIATDLD-SDRNGKVTYSIIRGDDREQFEID--- 3382
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
P + + V ++D T VL++L R+
Sbjct: 3383 PDSGYVSVAEELDRETTSN----YVLEVLARD 3410
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F++ Y A V E +GT V+ + A D G+N+ ++YS+ GG+ F I+N+
Sbjct: 3222 NPPEFANKYYFAVVPEIDAVGTEVVKVLATSKD-TGVNADVTYSIIGGNEHKKFAINNKT 3280
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I + +LD E A Y LT++AVD G PP
Sbjct: 3281 GV--------------------ISIADMLDYERAK-DYFLTIQAVDGGIPP 3310
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ +Y+ V E P+ T +I LK DAD G N+++ + GG+ G F I+ E
Sbjct: 370 NAPVFNKEIYEVKVPETAPVNTPLIRLKVTDAD-EGRNAQVFLEIVGGNEGGEFNINPET 428
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ + T + + K++ Y+LT+ A+D+G
Sbjct: 429 GM-----LYTAVPLDAESKQF----------------YSLTVSAIDQG 455
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 51/120 (42%), Gaps = 22/120 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+ +P F DF + V E+ +GT ++ LKA D D G N K+ Y + GGD F +D
Sbjct: 740 LKSPEFIDFPAEIKVNESVALGTTLVKLKARDRD-LGYNGKLIYGISGGDKHSQFCVD-- 796
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
+D G K V+ LDRE Y L + D G P + + P
Sbjct: 797 ------------MDTGELK------VIGYLDRERES-EYFLNITLYDLGKPQKSASRMLP 837
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ Y ++E++PIG +I K DAD ++ R G+ F ++ +G
Sbjct: 3432 NPPIFAQTNYTTVIQEDKPIGYPIIQFKITDADTAPNTEPYTFDFRSGNDGNSFRLEEDG 3491
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPL 97
L TK + K K+ ++ +++ D I PL
Sbjct: 3492 VLR----TATKFNH--KIKDNYLLQIRVFDNGIPPL 3521
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR--GGDGLGYFTID-NE 60
P F+ Y ++ E GT V+T+ A D D G+N KISYS++ + YF ID NE
Sbjct: 2288 PEFTQENYNVSISEAAQFGTPVLTVIANDND-TGINKKISYSIQNDSSNSSEYFYIDENE 2346
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLL 90
G + + +D + IVV K L
Sbjct: 2347 GVV----YLKQALDHEEASSHHFIVVAKDL 2372
>gi|307210686|gb|EFN87109.1| Putative fat-like cadherin-related tumor suppressor-like protein
[Harpegnathos saltator]
Length = 1079
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 52/61 (85%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++AP+F DFV A+V ENQP+GTLV T++A DADPPG +S+I YS+RGGDG+G F+IDNE
Sbjct: 1007 LHAPLFDDFVASASVFENQPVGTLVTTVRARDADPPGGDSRIGYSIRGGDGIGVFSIDNE 1066
Query: 61 G 61
G
Sbjct: 1067 G 1067
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
P HFR+ G + EYNI VL LLDRE A GYNLTLRA D+G P R +YK P
Sbjct: 252 PAGHFRVRQVS---GPRSGEYNIEVLHLLDRETALQGYNLTLRATDRGVPQRYSYKFVP 307
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS +Y+ V E PI T VI LK DAD G N+ + + GG+ G F ++ E
Sbjct: 316 NAPVFSREIYEVKVPETAPINTPVIRLKVTDAD-EGKNALVFLEIVGGNEGGEFHVNAET 374
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ + T ++ +KK + Y LT+ AVD+G
Sbjct: 375 GM-----LYTAVNLDAEKKAF----------------YTLTVSAVDQG 401
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 51/122 (41%), Gaps = 26/122 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F + + EN+P GT V+ + A D D G N+ ISYS IDN
Sbjct: 423 NDPTFDQPEKEVWIDENEPAGTSVVRVTAKDRD-SGENAYISYS-----------IDN-- 468
Query: 62 PLNHFRIVPTKID--PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ VP +ID G K ++LD E Y L +RA D G P R +
Sbjct: 469 ----IKKVPFEIDHFSGIVKTR------QVLDYETMKREYLLHVRASDWGLPYRRQAEMQ 518
Query: 120 PR 121
R
Sbjct: 519 LR 520
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 50/120 (41%), Gaps = 22/120 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++AP F DF + V E+ +GT ++ ++A D D N K+ + + GD F
Sbjct: 686 VHAPEFLDFPDEIRVNESAKLGTTLVRIRARDRDLD-YNGKLVFCISSGDRDSVF----- 739
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
I+P T + E V+ LDRE Y L + D G P + K P
Sbjct: 740 -----------GIEPDTGELE----VIGYLDRERES-EYYLNISVYDLGKPQKSASKMLP 783
>gi|380020280|ref|XP_003694018.1| PREDICTED: LOW QUALITY PROTEIN: fat-like cadherin-related tumor
suppressor homolog [Apis florea]
Length = 4753
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 66/111 (59%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+APVF DFV A+V ENQP+GTLV T++A DADP G +S+I Y++RGGDG+G F+IDNEG
Sbjct: 1107 HAPVFDDFVVSASVFENQPVGTLVTTVRAKDADPLGGDSRIGYTIRGGDGIGIFSIDNEG 1166
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
NI +LD E + GY LT+ A D G P
Sbjct: 1167 ---------------------NIKTKAVLDVE-SKRGYWLTVYAQDHGVVP 1195
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 28 LKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVL 87
++ D D S + GGD P HFR+ P G EYNI VL
Sbjct: 328 VRVIDNDEGTHGQIASLDIVGGD-----------PAGHFRVRPAG---GPHSGEYNIEVL 373
Query: 88 KLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
LLDRE A GYNLTLRA+D+G P R +YK P
Sbjct: 374 HLLDRETATQGYNLTLRAMDRGIPQRFSYKFVP 406
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 56/112 (50%), Gaps = 27/112 (24%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP F+ Y AT+ E+ +GTLV + A D D G+N KI Y + DG
Sbjct: 3185 NAPKFTMQTYSATLPEDVEVGTLVTKVHATD-DDIGINRKIRYEFIDSADG--------- 3234
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVL-KLLDREIAPLGYNLTLRAVDKGTP 111
HF I D G IV L K LDRE + YN+T++A+D+GTP
Sbjct: 3235 ----HFLIA---TDSG-------IVTLGKPLDRETKAM-YNVTIQALDQGTP 3271
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 24/116 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS+ Y+A+++E+ IG VI + A D D N +SY + GD F+ID
Sbjct: 3394 NAPIFSEVSYRASIREDAKIGEKVIQVFANDLDSE-ENGNVSYYIERGDRQKQFSID--- 3449
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVDKGTPPRETY 116
+K I+++ LDRE +G Y L + A D G P ++
Sbjct: 3450 -----------------QKTGQIIIVAPLDRE--EIGNYVLEVHARDSGIPVLSSF 3486
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS +Y+ V E PI T VI LK DAD G N+ + + GG+ G F ++ E
Sbjct: 415 NAPVFSREIYEVKVPETAPINTPVIQLKVTDAD-EGRNALVFLEIVGGNEGGEFHVNAET 473
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ + T ++ +KK + Y LT+ AVD+G
Sbjct: 474 GM-----LYTAVNLDAEKKAF----------------YTLTVSAVDQG 500
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
+AP F + Q V E PIG V+ + A D D G N+KI+YS+ G+ FTID
Sbjct: 1628 HAPEFISEIIQGKVYETSPIGAAVVQVYAIDRD-KGDNAKITYSITSGNVGNMFTID 1683
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 17/126 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F + + EN+P GT V+ + A D D G N+ ISYS+ + +
Sbjct: 522 NDPTFEQSEMEVWIDENEPAGTSVVKITAKDRD-SGENAYISYSIDNIQKVPF------- 573
Query: 62 PLNHFR-IVPTK--IDPGTKKKEYNIVVLKLLD-----REIAPLGYNLTLRAVDKGTPPR 113
++HF IV TK +D T K+EY ++ +++ D R A + ++ +R V+ P
Sbjct: 574 EIDHFSGIVRTKQVLDYETMKREY-LLHVRVSDWGMPFRRQAEMRLHVKVRDVNDNRPQF 632
Query: 114 ETYKAT 119
E T
Sbjct: 633 ERIDCT 638
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 22/120 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++AP F DF + E+ IGT ++ ++A D D N K+ + V GGD F
Sbjct: 785 VHAPEFVDFPSEIKANESVRIGTTLVRIRARDKD-LDYNGKLVFCVSGGDRDSVF----- 838
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
KIDP T ++ V+ LDRE Y L + D G P + + P
Sbjct: 839 -----------KIDPDTG----DLNVIGYLDRE-RESEYFLNISVYDLGKPQKSASRMLP 882
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ +Y + V E +GT V + A D G+N+ + YS+ GG+ F ID
Sbjct: 3289 NPPEFASKIYFSKVPEIYAVGTEVARVLATSKDT-GVNADVYYSIVGGNEHKKFQIDART 3347
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I++ + LD E A Y LT++AVD G PP
Sbjct: 3348 GV--------------------IIIAEQLDFERAR-DYFLTIQAVDGGIPP 3377
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y A V+E++P+G V+ DAD + ++ R G+ F ++ +G
Sbjct: 3499 NPPLFSLSNYTAVVQEDKPLGHTVLQFVVTDADIEPNAAPYTFDFRSGNEGDAFRLEQDG 3558
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L TK + K K Y L +R D G+PP
Sbjct: 3559 TLR----TATKFNNRVKDK------------------YVLHIRVFDNGSPP 3587
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 20/108 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ Y +V E P GT V+ + + D D +N ++ Y+++ D E
Sbjct: 2355 PEFTQDSYNISVSEAAPFGTSVLRVSSRDND-TDINQQVRYAIQN---------DTENST 2404
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ F I P +E I + + LD E A ++ T+ A+D+G P
Sbjct: 2405 DLFHIDP---------EEGVIFLKRSLDHE-AHESHHFTVIAIDRGVP 2442
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F D Y+ATV E+ GT+V+ L D D +N+ I + + GD F I + G
Sbjct: 2980 NPPAFVDDRYEATVNEDALPGTVVVKLITVDKD-SDVNTPIEFYITSGDPRSQFQIRSTG 3038
Query: 62 PL 63
+
Sbjct: 3039 EV 3040
>gi|383855810|ref|XP_003703403.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog
[Megachile rotundata]
Length = 4739
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 66/112 (58%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++APVF DFV A+V ENQPIGTLV T++A DADP G +S+I Y++RGGDG+G F+ID+E
Sbjct: 1090 LHAPVFDDFVVSASVFENQPIGTLVTTVRAKDADPLGGDSRIGYTIRGGDGIGIFSIDDE 1149
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G NI LD E + GY LT+ A D G P
Sbjct: 1150 G---------------------NIKTKAALDVE-SKRGYWLTVYAQDHGVVP 1179
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 50/94 (53%), Gaps = 18/94 (19%)
Query: 28 LKAADADPPGMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVV 86
++ D D G++ KI S + GGD P HFR+ P EYNI V
Sbjct: 314 VRVIDHDE-GVHGKIASLDIVGGD-----------PAGHFRV-----RPAXXSGEYNIEV 356
Query: 87 LKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
L LLDRE A GYNLTLRA+D+G P + +YK P
Sbjct: 357 LHLLDRETAAQGYNLTLRAMDRGVPQKFSYKFVP 390
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS+ Y+A+V+E+ IG V + A D D N +SY + GD F+ID
Sbjct: 3377 NAPIFSEVSYRASVREDAKIGEKVTQVFANDLDSE-ENGNVSYYIERGDRQKQFSID--- 3432
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+K I V LDRE Y L + A D G P ++
Sbjct: 3433 -----------------QKTGQITVAAPLDRE-EIASYVLEIHARDSGVPMLSSF 3469
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ +Y+ V E PI T VI LK DAD G N+ + + GG+ G F ++ E
Sbjct: 399 NAPVFNREIYEVKVPETAPINTPVIRLKVTDAD-EGKNALVFLEIVGGNEGGEFFVNAET 457
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
++ T ++ +KK + Y LT+ AVD+G
Sbjct: 458 G-----VLYTAMNLDAEKKAF----------------YTLTVSAVDQG 484
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 54/112 (48%), Gaps = 27/112 (24%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
N P F+ Y AT+ E+ +GTLV + A D D G+N KI Y + DG
Sbjct: 3168 NPPKFTMQTYSATLPEDVEVGTLVTKVHATD-DDIGINRKIRYEFIDSADG--------- 3217
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVL-KLLDREIAPLGYNLTLRAVDKGTP 111
F I D G IV L K LDRE + YN+T++A+D+GTP
Sbjct: 3218 ----QFLIAA---DSG-------IVTLGKSLDRETKAM-YNVTIQALDQGTP 3254
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F + Q V E P+G V+ + A D D G N+KI+YS+ G+ F+ID E
Sbjct: 1612 HAPEFISEIIQGKVFETSPVGAAVVQVWAIDRD-RGDNAKITYSITSGNVGNMFSIDPEL 1670
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ I V + LD I+ Y L ++A D G+P
Sbjct: 1671 GV--------------------IRVARELDLSISS-EYILLVKATDHGSP 1699
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 49/113 (43%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F + EN+P GT V+ + A D D G N+ ISYS IDN
Sbjct: 506 NDPTFEQSEMDVWIDENEPAGTSVVKITAKDRD-SGENAYISYS-----------IDN-- 551
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLK-LLDREIAPLGYNLTLRAVDKGTPPR 113
+ VP +IDP + IV K +LD E Y L +R D G P R
Sbjct: 552 ----IQKVPFEIDPFS-----GIVRTKQVLDYETMKREYLLHVRVGDWGLPYR 595
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ VY + V E +GT V + A D G+N+ + YS+ GG+ F ID
Sbjct: 3272 NPPEFASKVYFSKVPEIYAVGTEVARVLATSKD-TGVNADVYYSIVGGNEHKKFQIDARS 3330
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I + + LD E A Y LT++A+D G PP
Sbjct: 3331 GV--------------------ITIAEQLDYERAR-DYFLTIQAIDGGIPP 3360
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 20/108 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ Y +V E P GT V+ + + D D G+N ++ Y+++ D E
Sbjct: 2339 PEFTQDSYNISVSEAAPFGTSVLKVSSRDND-TGINQQVRYAIQN---------DTENST 2388
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ F I P +E I + + LD E A ++ T+ A+D+G P
Sbjct: 2389 DLFHIDP---------EEGVIFLKRSLDHE-AHESHHFTVIAIDRGVP 2426
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y A V+E++P+G V+ DAD ++ R G+ F ++ +G
Sbjct: 3482 NPPLFSLSNYTAVVQEDKPLGHTVLQFVVTDADIEPNADPYTFDFRSGNEGDAFRLEQDG 3541
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L TK + K K Y L +R D G+PP
Sbjct: 3542 TLR----TATKFNNRVKDK------------------YVLHIRVFDNGSPP 3570
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 51/121 (42%), Gaps = 24/121 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-N 59
++AP F DF + V E+ IGT++ + A D D N K+ + + GD F+ID +
Sbjct: 769 VHAPEFIDFPNEIKVNESAKIGTVLAKIWARDRD-LDYNGKLVFVISSGDRDSVFSIDPD 827
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+G LN V+ LDRE Y L + D G P + +
Sbjct: 828 KGNLN---------------------VVGYLDRERES-EYFLNISVYDLGKPQKSASRML 865
Query: 120 P 120
P
Sbjct: 866 P 866
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F D Y+A V E+ GT+V+ L D D +N+ I + + GD F I + G
Sbjct: 2963 NPPAFVDDRYEAAVNEDALPGTVVVKLITVDKD-SDVNTPIEFYITSGDSRSQFQIRSTG 3021
Query: 62 PL 63
+
Sbjct: 3022 EV 3023
>gi|332025272|gb|EGI65444.1| Putative fat-like cadherin-related tumor suppressor-like protein
[Acromyrmex echinatior]
Length = 1179
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/58 (68%), Positives = 48/58 (82%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
PVF DFV A+V ENQPIGTLV T++A D DPPG +S+I YS+RGGDG+G F+IDNEG
Sbjct: 1121 PVFDDFVVSASVFENQPIGTLVTTVRAKDVDPPGGDSRIGYSIRGGDGVGIFSIDNEG 1178
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
P HFR+ P G++ EYNI VL LLDRE A GYNLTLRA+D+G P R +YK P
Sbjct: 367 PAGHFRVRPAG---GSRSGEYNIEVLHLLDRETALQGYNLTLRAMDRGVPQRYSYKFVP 422
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS +Y+ V E PI T +I LK DAD G N+ + + GG+ G F ++ E
Sbjct: 431 NAPVFSREIYEVKVPETAPINTPIIRLKVTDAD-EGKNALVYLEIVGGNEGGEFYVNAET 489
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ + T ++ +KK + Y LT+ A+D+G
Sbjct: 490 GM-----LYTAVNLDAEKKAF----------------YTLTVSAIDQG 516
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 52/123 (42%), Gaps = 28/123 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGY--FTIDN 59
N P F + + EN+P GT V+ + A D D G N+ ISYS+ D L F ID
Sbjct: 538 NDPTFDQPEMEVMIDENEPAGTSVVRVTAKDRD-SGENAYISYSI---DNLKKVPFEID- 592
Query: 60 EGPLNHFR-IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
HF IV TK ++LD E Y L +RA D G P R +
Sbjct: 593 -----HFSGIVKTK---------------QVLDYETMKREYLLHVRASDWGLPYRRQAEM 632
Query: 119 TPR 121
R
Sbjct: 633 QLR 635
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 50/121 (41%), Gaps = 24/121 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-N 59
++AP F DF + V E+ +GT+++ ++A D D N K+ + + GD F ID +
Sbjct: 800 VHAPEFIDFPNEIRVNESLKLGTVLVQIRARDRD-LDYNGKLVFVISSGDRDSVFGIDPD 858
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
G LN + LDRE Y L + D G P + K
Sbjct: 859 TGDLN---------------------TIGYLDRE-RENEYYLNISVFDLGKPQKSASKML 896
Query: 120 P 120
P
Sbjct: 897 P 897
>gi|307179933|gb|EFN68068.1| Putative fat-like cadherin-related tumor suppressor-like protein
[Camponotus floridanus]
Length = 998
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 49/58 (84%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+PVF DFV A+V ENQP+GTLV T++A DADPPG +SK+ YS+RGGDG+G F+ID+E
Sbjct: 900 SPVFDDFVVSASVFENQPVGTLVTTVRAKDADPPGGDSKVGYSIRGGDGIGIFSIDDE 957
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
P HFR+ P G EYNI VL LLDRE A GYNLTLRA+D+G P R +YK P
Sbjct: 143 PAGHFRVRPVG---GPHSGEYNIEVLHLLDRETALQGYNLTLRAMDRGVPQRYSYKFVP 198
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS +Y+ V E PI T +I LK DAD G N+ + + GG+ G F ++ E
Sbjct: 207 NAPVFSREIYEVKVPETAPINTPIIRLKVTDAD-EGRNALVYLEIVGGNEGGEFYVNAET 265
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ + T ++ +KK + Y LT+ A+D+G
Sbjct: 266 GM-----LYTAVELDAEKKAF----------------YTLTVSAIDQG 292
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 52/123 (42%), Gaps = 28/123 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGY--FTIDN 59
N P F + + EN+P GT V+ + A D D G N+ ISYS+ D L F ID
Sbjct: 314 NDPTFDQPEMEVWLDENEPAGTSVVRVTAKDRD-SGENAYISYSI---DNLKKVPFEID- 368
Query: 60 EGPLNHFR-IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
HF IV TK ++LD E Y L +RA D G P R +
Sbjct: 369 -----HFSGIVKTK---------------QVLDYETMKREYLLHVRASDWGLPYRRQAEM 408
Query: 119 TPR 121
R
Sbjct: 409 QLR 411
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 24/121 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-N 59
M+AP F DF + V E+ +GT ++ ++A D D N K+ + + GD F ID +
Sbjct: 577 MHAPEFIDFPSEIRVNESLKLGTTLVRIRARDRDLD-YNGKLVFVISSGDRDSVFGIDPD 635
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
G LN + LDRE Y L + D G P + K
Sbjct: 636 TGDLN---------------------TIGYLDRERES-EYYLNISVFDLGKPQKSASKML 673
Query: 120 P 120
P
Sbjct: 674 P 674
>gi|340728577|ref|XP_003402597.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog,
partial [Bombus terrestris]
Length = 931
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 50/60 (83%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++APVF DFV A+V ENQPIGTLV T++A DADP G +S+I Y++RGGDG+G F+IDNE
Sbjct: 872 LHAPVFDDFVVSASVFENQPIGTLVTTVRAKDADPLGGDSRIGYTIRGGDGIGIFSIDNE 931
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 50/94 (53%), Gaps = 16/94 (17%)
Query: 28 LKAADADPPGMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVV 86
++ D D G++ +I S + GGD P HFR+ P G EYNI V
Sbjct: 94 VRVVDNDE-GIHGQIASLDIVGGD-----------PAGHFRVRPAG---GPHSGEYNIEV 138
Query: 87 LKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
L LLDRE A GYNLTLRA D+G P R +YK P
Sbjct: 139 LHLLDRETAVQGYNLTLRATDRGVPQRYSYKFVP 172
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS +Y+ V E PI T VI LK DAD G N+ + + GG+ G F ++ E
Sbjct: 181 NAPVFSREIYEVKVPETAPINTPVIRLKVTDAD-EGKNALVFLEIVGGNEGGEFYVNAET 239
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ + T ++ +KK + Y LT+ AVD+G
Sbjct: 240 GM-----LYTAVNLDAEKKAF----------------YTLTVSAVDQG 266
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 17/126 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F + + EN+P GT V+ + A D D G N+ ISYS+ + +
Sbjct: 288 NDPTFEQSEMEVWIDENEPAGTSVVKITAKDRD-SGENAYISYSIDNIQKVPF------- 339
Query: 62 PLNHFR-IVPTK--IDPGTKKKEYNIVVLKLLD-----REIAPLGYNLTLRAVDKGTPPR 113
++HF IV TK +D T K+EY ++ +++ D R A + ++ +R V+ P
Sbjct: 340 EIDHFSGIVKTKQVLDYETMKREY-LLHVRVSDWGLPYRRQAEMQLHVKVRDVNDNRPQF 398
Query: 114 ETYKAT 119
E T
Sbjct: 399 ERIDCT 404
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 24/121 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-N 59
++AP F DF + E+ IGT ++ ++A D D N K+ + + GD F ID +
Sbjct: 551 IHAPEFVDFPSEIKANESVKIGTTLVKIRARDRDLD-YNGKLVFCISSGDRDSVFGIDPD 609
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
G LN V+ LDRE Y L + D G P + K
Sbjct: 610 TGDLN---------------------VIGYLDRE-RESEYFLNISVYDLGKPQKSASKML 647
Query: 120 P 120
P
Sbjct: 648 P 648
>gi|328790119|ref|XP_624967.2| PREDICTED: fat-like cadherin-related tumor suppressor homolog isoform
2, partial [Apis mellifera]
Length = 1065
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 47/58 (81%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
P+F DFV A+V ENQ +GTLV T++A DADP G +S+I Y++RGGDG+G F+IDNEG
Sbjct: 1008 PLFDDFVVSASVFENQAVGTLVTTVRAKDADPLGGDSRIGYTIRGGDGIGIFSIDNEG 1065
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
P HFR+ P G EYNI VL LLDRE A GYNLTLRA D+G P R +YK P
Sbjct: 250 PAGHFRVRPAG---GPHSGEYNIEVLHLLDRETAVQGYNLTLRATDRGVPQRFSYKFVP 305
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS +Y+ V E P+ T VI LK DAD G N+ + + GG+ G F ++ E
Sbjct: 314 NAPVFSREIYEVRVAETAPVNTPVIQLKVTDAD-EGRNALVFLEIVGGNEGGEFYVNAET 372
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ + T + +KK + Y LT+ AVD+G
Sbjct: 373 GM-----LYTAVSLDAEKKAF----------------YTLTVSAVDQG 399
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 17/121 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F + + EN+P GT V+ + A D D G N+ ISYS+ + +
Sbjct: 421 NDPTFEQSEMEVWIDENEPAGTSVVKITAKDRD-SGENAYISYSIDNIQKVPF------- 472
Query: 62 PLNHFR-IVPTK--IDPGTKKKEYNIVVLKLLD-----REIAPLGYNLTLRAVDKGTPPR 113
++HF IV TK +D T K+EY ++ +++ D R A + ++ +R V+ P
Sbjct: 473 EIDHFSGIVKTKQVLDYETMKREY-LLHVRVSDWGMPFRRQAEMRLHVKVRDVNDNRPQF 531
Query: 114 E 114
E
Sbjct: 532 E 532
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 22/120 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++AP F DF + E+ IGT ++ ++A D D N K+ + V GD F
Sbjct: 684 VHAPEFVDFPSEIKANESVGIGTTLVRIRARDKDLD-YNGKLVFCVSAGDRDSVF----- 737
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
KIDP T ++ V+ LDRE Y L + D G P + + P
Sbjct: 738 -----------KIDPDTG----DLNVIGHLDRERES-EYFLNISVYDLGKPQKSASRMLP 781
>gi|242006694|ref|XP_002424182.1| protocadherin fat 2 precursor, putative [Pediculus humanus corporis]
gi|212507523|gb|EEB11444.1| protocadherin fat 2 precursor, putative [Pediculus humanus corporis]
Length = 4716
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 69/127 (54%), Gaps = 13/127 (10%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF DFV +VKEN P+GT+V T++A D DPPG +SK+SY ++GGDG+GYF+ID G +
Sbjct: 1130 PVFPDFVVSCSVKENLPVGTVVTTVQAVDQDPPGDDSKVSYYIKGGDGVGYFSIDENGQI 1189
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNL----TLRAVDKGTPPRET---Y 116
+ D TK + V + D + PL L + V+ +P + Y
Sbjct: 1190 KTLAV----FDVETKSHYWLTVYAE--DHGVIPLSSRLEVYVAIENVNDNSPLTDEPIYY 1243
Query: 117 KATPRNG 123
+ P N
Sbjct: 1244 ASVPENS 1250
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 56/110 (50%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F +Y AT+ E+ IGTLV L A D D G+N KI Y+ + NE
Sbjct: 3208 NPPQFEKEMYSATLPEDVQIGTLVTKLHATDKD-IGINRKIKYT--------FIDSANE- 3257
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
HF+I P D G + +LK LDRE YNL+++A D+GTP
Sbjct: 3258 ---HFKIEP---DSGI------VTLLKPLDRE-QKATYNLSIKAFDQGTP 3294
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 39/54 (72%), Gaps = 6/54 (11%)
Query: 65 HFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
HFRI KID G EY+I +L+ ++R+ P YN+TLRAVD GTPP++++K+
Sbjct: 377 HFRI--KKIDDG----EYSIELLECINRDNHPKLYNITLRAVDSGTPPKQSFKS 424
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y AT++E+ +G ++ + A D D +N +ISYS+ GD F ID +
Sbjct: 3417 NPPVFIQMSYSATIREDTQVGDKILQVTANDLD-SNLNGQISYSIINGDRQNQFRIDKDN 3475
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
++V LDRE+ Y L ++A D G P
Sbjct: 3476 GY--------------------LIVNAPLDREMIS-SYVLEIQATDHGIP 3504
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y T+ E++PIGT ++ + A D G+N++ISYS+ GG+ F I+
Sbjct: 3312 NPPEFAYKTYYGTIPESEPIGTEIVRVLATSKD-TGINAEISYSIVGGNEHKKFEIN--- 3367
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+K + +++ LD E A Y LT++A D G PP
Sbjct: 3368 -----------------QKTGVVKIVEPLDFERAK-DYLLTIQATDGGVPP 3400
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N+P+ + +Y A+V EN G L++ L A DAD N+KI Y + G+ YFTID+
Sbjct: 1233 NSPLTDEPIYYASVPENSESGKLIVELSATDADLDP-NNKIFYKITAGNPQSYFTIDS 1289
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 22/109 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F +Y+ + EN P+ + VI LK A+ D N+K+ + GG+ F +++E
Sbjct: 435 NIPIFDREIYEVNIPENSPVNSPVIRLKVANPD-ESKNAKVFLEIVGGNEGNEFYLNSET 493
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGT 110
+ + K+LD E Y LT+ A+D+GT
Sbjct: 494 GM--------------------LYTAKILDAEEKSF-YTLTVSAIDQGT 521
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 22/120 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+++P F +F + V E+ +GT + T++A D D G N K+ + + GGD F ID+
Sbjct: 806 IHSPEFINFPLEIKVNESAALGTRLTTIQARDRD-LGYNGKLVFGISGGDQDSVFKIDS- 863
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
D G K V+ LDRE Y L + D G P + + K P
Sbjct: 864 -------------DTGELK------VIGYLDRERTD-EYLLNISVFDLGRPQKSSSKILP 903
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 47/112 (41%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F + EN+P GT V+ + A D D G NS ISYS I N
Sbjct: 542 NDPTFDTSEMNVVIDENEPAGTTVLKVTAKDKD-FGENSYISYS-----------IANLN 589
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P VP +ID + I ++LD E Y L +RA D G P R
Sbjct: 590 P------VPFEIDHFSGI----IRTTQVLDYESMRRNYILRIRASDWGLPFR 631
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y A V+E++P G +++ DAD S ++ R G+ F + +G
Sbjct: 3522 NPPLFSQDNYTAVVQEDKPPGFVILKFHVTDADAGFNTSPFTFDFRAGNEGLMFKLAQDG 3581
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L K++N ++ D Y L +R D GTPP
Sbjct: 3582 SLQ-------------TAKKFN---HRMKD------NYLLHIRVFDNGTPP 3610
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 44/106 (41%), Gaps = 23/106 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y +V E+ GT+VI L D D ++S++ + GD + F I G
Sbjct: 3003 NPPVFTSEHYTGSVSEDALPGTVVIQLNTLDLD-SDLDSRVDLYITSGDIMAQFQIRQTG 3061
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
I V K LDRE+ YNL + A D
Sbjct: 3062 ---------------------EIYVAKPLDRELIS-HYNLEVTATD 3085
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVIT-------LKAADADPPGMNSKISYSVRGGDGLGY 54
NAP F YQ + E+ PIG+LV+T +KA D D +N+ +SY + +
Sbjct: 1857 NAPRFLQAFYQGNISESSPIGSLVLTTDNSPLVIKAEDEDSE-LNALLSYDIVEDLPRKF 1915
Query: 55 FTIDN 59
F ID+
Sbjct: 1916 FHIDS 1920
>gi|195129685|ref|XP_002009286.1| GI13952 [Drosophila mojavensis]
gi|193920895|gb|EDW19762.1| GI13952 [Drosophila mojavensis]
Length = 2436
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 6/95 (6%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP F DF+Y+ ++EN P GTLV+ + A D D +NSKISYS+ GGDGLG F+++ +G
Sbjct: 1081 APEFDDFIYEGKIQENMPKGTLVMNVTARDMDSMDINSKISYSITGGDGLGIFSVNKQGS 1140
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPL 97
+ T++D TK + + L D I PL
Sbjct: 1141 IQSL----TQLDAETKS--FYWLTLCAQDNAIVPL 1169
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F + + EN+ G V+ L A D D G N+ ISYS+ + + +
Sbjct: 499 NDPIFENINSTIEISENELAGLFVVKLTAKDKD-SGENAYISYSIANLNDVPF------- 550
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
++HF V I L+D E Y L +RA D G P R
Sbjct: 551 EIDHFSGV--------------IKTTNLIDYETMQRNYTLLVRASDWGLPYR 588
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N+PVF VY+ V I + + A D D G NS+I+YS++ G F ID+
Sbjct: 1291 NSPVFDQRVYKVQVPSTTHINESIFQVHAIDNDD-GENSRITYSIKSGKKKNKFRIDS 1347
>gi|195435720|ref|XP_002065827.1| GK20296 [Drosophila willistoni]
gi|194161912|gb|EDW76813.1| GK20296 [Drosophila willistoni]
Length = 4674
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 59/96 (61%), Gaps = 6/96 (6%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP F DFV+Q +KEN+P GT V+ + A D D MN+KI+YS+ GGDGLG F+++++G
Sbjct: 1080 APEFDDFVFQGIIKENRPKGTFVLNVTARDMDEIDMNAKITYSITGGDGLGIFSVNDKGS 1139
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG 98
++ +++D TK + + L D I PL
Sbjct: 1140 IHSL----SQLDAETKS--FYWLTLCAQDNAIVPLS 1169
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F +Y+ V E+ +G + T+KA D D G+N+K+ Y++ GGD G F+ID
Sbjct: 3369 NSPKFVQDIYRVNVLEDIALGKQIATVKAID-DDAGLNAKLHYNINGGDNFGQFSID--- 3424
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+N GT I V + LDRE YNL ++A D G P R
Sbjct: 3425 EIN-----------GT------ICVARPLDRE-TKAKYNLEIQACDGGIPQR 3458
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y ++EN+P+G ++IT +DAD P ++ ++ +R G+ G F ++ +G
Sbjct: 3474 NNPVFSSPNYTIVLQENRPLGYVLITFDVSDADEPPNSTPYTFDIRSGNEGGLFRLEQDG 3533
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L + +N KL D +++ +R D GTPP
Sbjct: 3534 SL-------------STASRFN---HKLQDE------FSIQIRVFDNGTPP 3562
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS Y ++ E+ + TL+ + A D D G+N K+ YS+ G +
Sbjct: 3160 NAPIFSMNQYIVSIPEDAQLQTLITKVHATDKD-FGVNRKVRYSLMGQN----------- 3207
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+HF I + G + E N LDRE P+ +NLT++A D G P
Sbjct: 3208 -YDHFEISKS---SGIIRLEKN------LDRETIPM-FNLTVKAEDHGVP 3246
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS Y V EN IG V T+ A D G+N+ I Y + GG+ F+ID+
Sbjct: 3264 NPPEFSLRQYLCQVHENATIGVEVCTVYATSKDI-GVNADILYYIMGGNEQRKFSIDS-- 3320
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K + + + LD E++ Y LT++A+D+GTPP
Sbjct: 3321 ------------------KTGALTLNESLDYEMSKYYY-LTIQAIDRGTPP 3352
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 45/112 (40%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F + ++ EN G+ V + A D D G N+ ISYS+
Sbjct: 499 NDPIFENMNRNISINENNLSGSFVAKVSAKDKD-SGENAYISYSIA-------------- 543
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ VP +ID T I L+D E Y L +RA D G P R
Sbjct: 544 ---NLNTVPFEIDHFTGI----IRTTSLIDFETMRRNYALIIRASDWGLPYR 588
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F +F Y+A + EN G +IT+KA D+D G S + Y + + +F I+
Sbjct: 2541 SPQFENFAYEAQISENLLHGHNIITVKATDSD-IGQYSSLYYEIDSEEMKKFFDINRSTG 2599
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLD 91
L ++ + ++ E+NI +LK+ D
Sbjct: 2600 LITSKVTFDR----EQRAEFNI-LLKVTD 2623
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 22/43 (51%)
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
P K EY I + K YNLTLRA D GTP R TYK
Sbjct: 338 PSETKNEYYIELNKFAQLSQQHFIYNLTLRAEDLGTPSRFTYK 380
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG 51
N P+F + Y ATV + GT+++ +KA D D G N ++ Y ++ G+G
Sbjct: 2127 NCPIFVNLPYYATVSIDDQKGTVIMHVKAIDLD-TGENGEVRYELKKGNG 2175
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 44/112 (39%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F Y+ V + + A D D G N +I+YS++ G G F IDN
Sbjct: 1290 NSPEFDQRAYKIQVPSTATANESIFQVHAIDIDD-GENGRITYSIKSGKGKNKFRIDNAS 1348
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+I + K L+ + + + +RA D GTP R
Sbjct: 1349 G--------------------HIFITKSLEPDFE---FEINIRAEDNGTPKR 1377
Score = 36.2 bits (82), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 47/113 (41%), Gaps = 20/113 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y A+V EN ++ + A DAD G N + Y YF D+E
Sbjct: 2849 NYPQFDSSFYSASVAENTDKVVSIVKITATDAD-SGPNGDVRY---------YFENDSES 2898
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
N F I I G I +L LDRE+ Y+L + A D G P +
Sbjct: 2899 VSNIFDI---DIYTGW------ITLLASLDRELRS-EYDLKVIATDNGHPKHD 2941
>gi|195175116|ref|XP_002028306.1| GL11897 [Drosophila persimilis]
gi|194117478|gb|EDW39521.1| GL11897 [Drosophila persimilis]
Length = 1548
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 58/96 (60%), Gaps = 6/96 (6%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP F DFVY+ +KEN P GT V+ + A D D +NSKI+YS+ GGDGLG F+++++G
Sbjct: 708 APEFDDFVYEGKIKENSPKGTFVLNITARDVDTIDLNSKITYSITGGDGLGIFSVNHQGS 767
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG 98
++ +++D TK + + L D I PL
Sbjct: 768 ISSL----SQLDAETKN--FYWLTLCAQDSAIVPLS 797
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
M++P F +Y+A + EN G +IT+KA D D G S + Y + + YF +D
Sbjct: 1291 MHSPQFEQSIYEAQIPENLLHGHNIITVKATDRD-FGPYSNLYYEIDSEEMKKYFIMDRN 1349
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLD-REIAPLGYNLTLRAVDKGTPPRETYKAT 119
L + +K+ +K++ +V K D E + Y + ++DK ++T +
Sbjct: 1350 TGL-----ITSKVTFDREKRDEYVVRAKDNDISENGAINYRIVQNSIDKKL--KDTLEIN 1402
Query: 120 PRNG 123
+NG
Sbjct: 1403 EKNG 1406
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F + ++ EN G+ V L A D D G NS ISYS+ + + +
Sbjct: 494 NDPIFEEMNTIISINENNLAGSFVAKLTAKDKDS-GENSYISYSIANLNTVPF------- 545
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
++HF V + L+D E Y L +RA D G P R
Sbjct: 546 EIDHFSGV--------------VRTTSLIDFETMKRNYELIIRASDWGLPYR 583
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ VY+ ++ E PI VI LK +D + G NS + + GG NEG
Sbjct: 387 NMPIFTQEVYEVSIPETAPINMPVIRLKVSDPE-LGKNSLVYLEIVGG---------NEG 436
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ FRI P D G + K LD E Y LT+ A+D+
Sbjct: 437 --DEFRINP---DSGM------LYTAKQLDAEKKTF-YTLTVSAIDQA 472
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F VY+ V + + + A D+D G N +++Y+++ G G F ID G
Sbjct: 918 NSPEFDQRVYKVQVPSTTIVNESIFQVHAIDSDE-GENGRVTYTIKSGKGKNKFRID--G 974
Query: 62 PLNHFRI 68
H I
Sbjct: 975 SRGHIYI 981
>gi|198477246|ref|XP_002136689.1| GA23242 [Drosophila pseudoobscura pseudoobscura]
gi|198142988|gb|EDY71700.1| GA23242 [Drosophila pseudoobscura pseudoobscura]
Length = 1980
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 58/96 (60%), Gaps = 6/96 (6%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP F DFVY+ +KEN P GT V+ + A D D +NSKI+YS+ GGDGLG F+++++G
Sbjct: 1076 APEFDDFVYEGKIKENSPKGTFVLNITARDVDTIDLNSKITYSITGGDGLGIFSVNHQGS 1135
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG 98
++ +++D TK + + L D I PL
Sbjct: 1136 ISSL----SQLDAETKN--FYWLTLCAQDSAIVPLS 1165
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F + ++ EN G+ V L A D D G NS ISYS+ + + +
Sbjct: 494 NDPIFEEMNRIISINENNLAGSFVAKLTAKDKDS-GENSYISYSIANLNTVPF------- 545
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
++HF V + L+D E Y L +RA D G P R
Sbjct: 546 EIDHFSGV--------------VRTTSLIDFETMKRNYELIIRASDWGLPYR 583
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ VY+ ++ E PI VI LK +D + G NS + + GG NEG
Sbjct: 387 NMPIFTQEVYEVSIPETAPINMPVIRLKVSDPE-LGKNSLVYLEIVGG---------NEG 436
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ FRI P D G + K LD E Y LT+ A+D+
Sbjct: 437 --DEFRINP---DSGM------LYTAKQLDAEKKTF-YTLTVSAIDQA 472
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 50/121 (41%), Gaps = 24/121 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-N 59
++ P F +F + ++ E+ +G V ++A D D G N K+ +++ GD F ID +
Sbjct: 758 IHKPEFVNFPSELSINESVQLGETVAWIEAKDRD-LGYNGKLVFAISDGDYDSVFRIDPD 816
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
G L ++ LDRE YNL + D G P + K
Sbjct: 817 RGELQ---------------------IIGYLDRE-RQHEYNLNITVYDLGNPTKSHSKML 854
Query: 120 P 120
P
Sbjct: 855 P 855
>gi|321478607|gb|EFX89564.1| hypothetical protein DAPPUDRAFT_233379 [Daphnia pulex]
Length = 6466
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/69 (55%), Positives = 49/69 (71%), Gaps = 5/69 (7%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP F DFV +A+V+EN P GTLV + A DADP G +S++SY++RGG GLG F+IDNE
Sbjct: 1915 APRFEDFVTEASVRENAPPGTLVAKVTATDADPSGDDSRLSYAIRGGTGLGLFSIDNEAD 1974
Query: 63 LNHFRIVPT 71
+VPT
Sbjct: 1975 -----VVPT 1978
Score = 65.1 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 46/112 (41%), Positives = 57/112 (50%), Gaps = 22/112 (19%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
V+++Q V+ ++ ADA P G S + GD GYF + G T
Sbjct: 1109 VEQSQVDVYAVVRVEDADAGPSGQIR--SLDIIDGDPDGYFRVQRVG---------TGGQ 1157
Query: 75 PGTK-----------KKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
PG E+NI VLKLLDRE AP+GYNLTLRAVD GTPPR +
Sbjct: 1158 PGNNNDKNNNNNNNGAAEFNIAVLKLLDRERAPMGYNLTLRAVDGGTPPRNS 1209
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 33/66 (50%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS Y A +E++P+G +++ L DAD P ++ +R G+ F ID G
Sbjct: 4642 NPPAFSQVNYTAIAQEDKPLGFVILKLLVTDADGPTNAGPFTFEIRSGNVDNAFRIDGNG 4701
Query: 62 PLNHFR 67
L R
Sbjct: 4702 SLRTAR 4707
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 50/120 (41%), Gaps = 22/120 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF Q V E+ GT +I L+A D D G N + Y + GGD F ID E
Sbjct: 1592 VHTPEFYDFPVQVRVNESVSSGTPLIRLRARDRD-HGYNGLLVYVISGGDDDSAFQIDTE 1650
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
L + V LDRE GY+L + D G P + ++ P
Sbjct: 1651 SGL--------------------LRVAGQLDRE-KRAGYSLNVTVFDLGQPQKSAWRILP 1689
Score = 43.9 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 22/117 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS +Y A+V E+ IG ++ + A D G+N++I YS+ GG+ +F ID
Sbjct: 4431 NPPQFSRKLYAASVAESSAIGAEILNVLATSLDI-GVNAEIKYSIVGGNEHRHFAID--- 4486
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
PL+ I + + LD E A Y LT++A+D G PP + A
Sbjct: 4487 PLSGV-----------------ISLAEPLDYERAREFY-LTVQALDGGVPPLSNHAA 4525
Score = 43.1 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 50/114 (43%), Gaps = 26/114 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD----GLGYFTI 57
NAP F+ Y V E+ + T+V + A D+D +N KI YS+ G F I
Sbjct: 4322 NAPSFNQDWYTFAVPEDAELRTIVGKIHATDSD-LALNRKIRYSMVTSTTSLAGQNSFAI 4380
Query: 58 DNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
D E + + V K LDRE P YNLT+ A+D GTP
Sbjct: 4381 DAESGI--------------------VTVAKGLDRETVP-SYNLTVSAIDLGTP 4413
Score = 42.7 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 48/110 (43%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ Y A ++E+ IG V+ L A D D G N +I+Y++ GD F ID+
Sbjct: 4536 NPPIFTQASYSAAIREDAIIGETVLRLNAVDLD-GGDNGRITYTLLNGDRHAQFRIDSST 4594
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L + V LDRE+ Y L + A D G P
Sbjct: 4595 GL--------------------LTVSGQLDRELIT-SYMLEVEARDNGLP 4623
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
+APVF Y+ + E P+GT +I L+ +D D G N+++ S+ GG+ G+F I+
Sbjct: 1223 HAPVFDREHYEVRIVETAPVGTPLIRLRVSDQD-QGRNAQVQLSIVGGNQGGHFRIN 1278
Score = 38.5 bits (88), Expect = 0.79, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 46/113 (40%), Gaps = 23/113 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+APV + Y V E GT ++ ++A DAD G N+K+ + + G +F N G
Sbjct: 4218 HAPVCTQHRYHELVSEATAPGTFIVRVRATDAD-EGANAKMKFYLTGEAAEYFFLDANSG 4276
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
L LK LDRE P+ Y LT D+ P E
Sbjct: 4277 QLK---------------------TLKPLDRETRPI-YTLTAHVQDRERPQWE 4307
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD 34
+APVFS+ Y+A V EN +G +ITL A DAD
Sbjct: 2605 HAPVFSEQHYRAEVSENAEVGAEIITLNATDAD 2637
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 9/105 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V ++ E IGT V L A DAD G N+KI++++ GG+ N G
Sbjct: 1698 NPPRFDRPVISVSIAETAQIGTSVAQLSANDAD-EGDNAKITFALAGGESSDLKLDPNTG 1756
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L V ++D ++ Y +VV+ R+ +P G LT +A+
Sbjct: 1757 LLT----VSGQLDR-ERRDFYEVVVIA---RDGSPNGPGLTAKAL 1793
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++P FS +Y V EN P GTLVI L A D D I+YS+ F ID E
Sbjct: 3666 HSPSFSRPLYDVEVMENLPAGTLVIQLNATDLDRDDF-GHITYSILSTFATETFRIDEE 3723
Score = 35.8 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F + Q + E +G++V + A D D G+N+K++YS+ G+ G F I+ +
Sbjct: 2711 HTPEFMSELVQVRIFETAAVGSVVTVMLAIDKDR-GVNAKVTYSISSGNVGGAFVIEPDS 2769
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
L V +D GT EY +VV
Sbjct: 2770 GLIR---VNQPLDVGT-AHEYMLVV 2790
Score = 35.8 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 13/110 (11%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDNEG 61
P FS+ Y T+ E P GT+V+ + A D D G+N+++ Y + G +
Sbjct: 3448 PEFSNNEYNVTLSEATPSGTVVLAVSAHDLD-SGINAQVVYRLLAETNGGQDAAVAVSAA 3506
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
F I P + GT +++++ LDRE L ++L + A D+G P
Sbjct: 3507 SAEFFHINP---EDGT------LILVRSLDRETQSL-HHLLVMASDQGNP 3546
Score = 35.4 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F + Y A V P G++V ++A D D G N I Y + G G
Sbjct: 3242 NRPAFFNLPYYAVVSSEAPKGSVVTKVQAMDKD-VGENGDIRYELLRGSG---------- 3290
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
FR+ ++ I++ +L+ + Y L + A D GTPP
Sbjct: 3291 --ELFRV---------DRRTGEILLRHVLEGQQGHSDYELVVAAYDGGTPP 3330
>gi|195378480|ref|XP_002048012.1| GJ13735 [Drosophila virilis]
gi|194155170|gb|EDW70354.1| GJ13735 [Drosophila virilis]
Length = 4641
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 58/96 (60%), Gaps = 6/96 (6%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP F DF Y+ ++EN P GTLV+ + A D D +N+KISYS+ GGDGLG F+++++G
Sbjct: 1044 APEFDDFAYEGKIRENMPKGTLVMNITARDMDGMDINAKISYSITGGDGLGIFSVNDQGS 1103
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG 98
++ T++D TK + + L D I PL
Sbjct: 1104 IHSL----TQLDAETKN--FYWLTLCAQDNAIVPLS 1133
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y ++EN+P+G + I DAD + +Y +R G+ G F ++ +G
Sbjct: 3438 NAPVFSQANYSVVLQENRPLGYVFIRFDVTDADEAPNSIPYTYDIRSGNEGGLFRLEQDG 3497
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L + +N KL D+ + + +R D GTPP
Sbjct: 3498 SL-------------STASRFN---HKLRDK------FTIQIRVFDNGTPP 3526
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A+VKE+ I +I +KA D D +N I Y++ GD L F+I+
Sbjct: 3333 NTPTFTQNNYRASVKEDVNIDVPIIDVKATDED-SNLNGIIKYNIVKGDSLSQFSIN--- 3388
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I GT I + + LDRE Y L ++A D G P R
Sbjct: 3389 -----------ISNGT------ISLARPLDRETIS-DYALEVQACDLGIPER 3422
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 52/110 (47%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS Y+ +++E+ + TLV + A D D G+N KI YS+ G + YF I
Sbjct: 3124 NAPIFSMPNYRVSIQEDAQLQTLVTKVHATDKD-FGINRKIKYSLIGTNS-DYFEISKS- 3180
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
G K E N LDRE + YNLTL A D G P
Sbjct: 3181 -------------TGIIKLEKN------LDRETISI-YNLTLIAEDYGKP 3210
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 61/141 (43%), Gaps = 38/141 (26%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-N 59
+++P F + VY+A++ EN P G +IT+KA D D G + + Y + + YF I+ N
Sbjct: 2503 VHSPQFEEIVYKASILENMPHGHEIITVKAIDND-FGQYASVYYEIASEEMKKYFEINRN 2561
Query: 60 EGPL-----------NHFRIVPTKIDPGTK---------------------KKEYNIVVL 87
G + + + + ID G+K KEY IV+
Sbjct: 2562 TGSITSKVAFDRELKDEYVLQLKAIDGGSKFGFATLRVSIKDVNDNSPQFFVKEYKIVI- 2620
Query: 88 KLLDREIAPLGYNLTLRAVDK 108
I P LT+RA+DK
Sbjct: 2621 ---SSSIKPNDTVLTVRAMDK 2638
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F + + EN+ G+ V L A D D G N+ ISYS+ + + +
Sbjct: 462 NDPIFENMNKVIYINENELAGSFVTKLTAKDRD-SGENAYISYSIANLNEVPF------- 513
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
++HF V I L+D E Y L +RA D G P R
Sbjct: 514 EIDHFSGV--------------IKTTNLIDYETMRRNYTLLIRASDWGLPYR 551
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 23/43 (53%)
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
P + EY I + KL YNLTLRA D GTP R T+K
Sbjct: 301 PAETRDEYYIELNKLAKLAEQHFAYNLTLRAEDFGTPSRFTFK 343
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N+PVF VY+ V + + + A D D G NS+I+YS++ G F ID+
Sbjct: 1254 NSPVFDQRVYKVQVPSTTNMNESIFQVHAIDNDD-GENSRITYSIKSGKKKNKFRIDS 1310
Score = 36.2 bits (82), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 48/108 (44%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y+ ++ E PI VI LK +D D G + + V GG NEG
Sbjct: 355 NVPIFTQEIYEVSIPETAPINMPVIRLKVSDPD-MGKFALVYLEVVGG---------NEG 404
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
FRI P D G + K LD E Y LT+ A+D+
Sbjct: 405 --GEFRINP---DSGM------LYTQKQLDAETKS-SYTLTVSAIDQA 440
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 48/114 (42%), Gaps = 20/114 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F + +Y A V EN ++ + A D D G N + Y YF ++ G
Sbjct: 2813 NYPKFDNTIYNADVAENTDKVASILKITATDED-TGSNGDVRY---------YFDDESNG 2862
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
N F I I G I +L LDRE+ +NL + A D G P ++
Sbjct: 2863 IRNVFDI---DIYTGW------ITLLSSLDREVQS-EFNLKVIATDNGHPKHDS 2906
>gi|328703041|ref|XP_003242077.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog isoform
2 [Acyrthosiphon pisum]
Length = 4147
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 58/113 (51%), Gaps = 22/113 (19%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP F F A V EN+P GTLV T+ A DADPPG S++ YS+ GDGLGYF+ID+EG
Sbjct: 1060 APEFGSFYATAFVDENEPPGTLVTTVSATDADPPGDVSRVGYSIVDGDGLGYFSIDSEG- 1118
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
NI + +LD E Y LT+ A D T P +
Sbjct: 1119 --------------------NIRTMVVLDVETKS-SYWLTVMAFDHATVPMHS 1150
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 39/57 (68%), Gaps = 5/57 (8%)
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
P HFRI T EYNIVVL +LDRE AP GYNL+LRAVD GTP R+TY++
Sbjct: 312 PDGHFRIKETG-----HSGEYNIVVLNMLDRETAPKGYNLSLRAVDSGTPERDTYRS 363
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 50/115 (43%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F Y + E+ +G +VI + A D D +N KI Y++ GD F ID+
Sbjct: 3394 NAPIFGQLAYTTQIDEDVHVGEVVIKVSATDLDSE-LNGKIRYALVKGDHHQQFAIDSFT 3452
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
NI V K LDRE YNL +RA D G P ++
Sbjct: 3453 G--------------------NITVAKPLDREQVS-TYNLQIRATDSGVPELMSF 3486
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 24/112 (21%)
Query: 2 NAPVF-SDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP+F S+ A++ E+ IGT+VI + A DAD G+N K+ +S++ +
Sbjct: 3184 NAPLFISNNNNTASLSEDAQIGTIVIKMHATDAD-IGLNRKLKFSLQ------------D 3230
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
NHF I D G + + K LDRE YN++++A+D+G+PP
Sbjct: 3231 SADNHFIISS---DSGI------VTLAKKLDRETCE-TYNISVKAIDQGSPP 3272
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP FS + Q V E +GT V+ L A D D G N+ +SY + G+ F+ID++
Sbjct: 1618 HAPEFSSNIVQGRVFETTAVGTSVLQLLATDKD-HGENAAVSYQIISGNIGNVFSIDSKL 1676
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
H ++K LD ++ Y L ++AVD G+PP
Sbjct: 1677 GTLH--------------------LMKELDMSVSS-EYTLIVKAVDSGSPP 1706
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F Y ATV E PI T V + A D G N+++ YS+ GG+ F+I++E
Sbjct: 3289 NPPIFVQRTYYATVSEIAPIDTEVTRVLATSLD-SGKNAEVVYSIAGGNEHNKFSINSET 3347
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I V ++LD E Y LT++A D G PP
Sbjct: 3348 GV--------------------ISVFEMLDYERVR-DYLLTIQATDLGEPP 3377
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 24/109 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
NAPVF +Y+ + E P+ + VI LK +D D G N+++S + GG+ G F I+
Sbjct: 374 NAPVFERELYEVNIAETAPVNSPVIKLKVSDKD-EGKNAQVSLEIVGGNEGGEFRINKRT 432
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
G L Y VVL R Y LT+ A+D+G
Sbjct: 433 GML------------------YTAVVLDAEHRS----SYTLTVSAIDQG 459
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 49/112 (43%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F ++ + ++ EN+P GT V+ + A D D G N ISYS+
Sbjct: 481 NDPLFEKYLMEVSINENEPAGTSVVKISARDKD-SGENGYISYSIA-------------- 525
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ + VP ID T I LLD E Y L +RA D G P R
Sbjct: 526 ---NLKPVPFDIDHFTGL----IKTTHLLDFETMRREYVLHIRASDWGYPYR 570
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF+ + Y A+V + V+ L A D D PG +K++YS+ GG+ +TID
Sbjct: 1937 PVFTSYEYNASVLIPTYVNVAVVQLNATDGDSPGQ-TKLTYSIIGGNEANVYTID 1990
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 48/118 (40%), Gaps = 24/118 (20%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P +F V E+ P+G ++ ++A D D G N K+ Y V GD F ID E
Sbjct: 737 VHKPELVNFPSAVQVNESVPLGYTILAIRARDRDL-GYNGKLVYGVSDGDDDSLFRIDPE 795
Query: 61 -GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
G LN V+ LDRE Y L + D G P T+K
Sbjct: 796 TGDLN---------------------VVGYLDRETRD-EYELNVTVSDLGKPQHTTWK 831
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y A V E++ G +V L DAD +Y +R D F+ID +G
Sbjct: 3499 NPPLFSQHNYSAFVHEDKKPGWIVCQLSVTDADLEPNGGPFTYDIRNNDDGNAFSIDPDG 3558
Query: 62 PL 63
+
Sbjct: 3559 TV 3560
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
+P+F VY+ T+ E+ P+ + V+ + A DAD GMN +I YS +
Sbjct: 161 SPLFYPVVYEKTIPEDTPLHSSVLKVSAEDAD-IGMNGEIYYSFK 204
>gi|328703039|ref|XP_003242076.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog isoform
1 [Acyrthosiphon pisum]
gi|328703043|ref|XP_003242078.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog isoform
3 [Acyrthosiphon pisum]
Length = 4140
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 58/113 (51%), Gaps = 22/113 (19%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP F F A V EN+P GTLV T+ A DADPPG S++ YS+ GDGLGYF+ID+EG
Sbjct: 1060 APEFGSFYATAFVDENEPPGTLVTTVSATDADPPGDVSRVGYSIVDGDGLGYFSIDSEG- 1118
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
NI + +LD E Y LT+ A D T P +
Sbjct: 1119 --------------------NIRTMVVLDVETKS-SYWLTVMAFDHATVPMHS 1150
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 39/57 (68%), Gaps = 5/57 (8%)
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
P HFRI T EYNIVVL +LDRE AP GYNL+LRAVD GTP R+TY++
Sbjct: 312 PDGHFRIKETG-----HSGEYNIVVLNMLDRETAPKGYNLSLRAVDSGTPERDTYRS 363
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 50/115 (43%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F Y + E+ +G +VI + A D D +N KI Y++ GD F ID+
Sbjct: 3387 NAPIFGQLAYTTQIDEDVHVGEVVIKVSATDLDSE-LNGKIRYALVKGDHHQQFAIDSFT 3445
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
NI V K LDRE YNL +RA D G P ++
Sbjct: 3446 G--------------------NITVAKPLDREQVS-TYNLQIRATDSGVPELMSF 3479
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 24/112 (21%)
Query: 2 NAPVF-SDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP+F S+ A++ E+ IGT+VI + A DAD G+N K+ +S++ +
Sbjct: 3177 NAPLFISNNNNTASLSEDAQIGTIVIKMHATDAD-IGLNRKLKFSLQ------------D 3223
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
NHF I D G + + K LDRE YN++++A+D+G+PP
Sbjct: 3224 SADNHFIISS---DSGI------VTLAKKLDRETCE-TYNISVKAIDQGSPP 3265
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP FS + Q V E +GT V+ L A D D G N+ +SY + G+ F+ID++
Sbjct: 1618 HAPEFSSNIVQGRVFETTAVGTSVLQLLATDKD-HGENAAVSYQIISGNIGNVFSIDSKL 1676
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
H ++K LD ++ Y L ++AVD G+PP
Sbjct: 1677 GTLH--------------------LMKELDMSVSS-EYTLIVKAVDSGSPP 1706
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F Y ATV E PI T V + A D G N+++ YS+ GG+ F+I++E
Sbjct: 3282 NPPIFVQRTYYATVSEIAPIDTEVTRVLATSLD-SGKNAEVVYSIAGGNEHNKFSINSET 3340
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I V ++LD E Y LT++A D G PP
Sbjct: 3341 GV--------------------ISVFEMLDYERVR-DYLLTIQATDLGEPP 3370
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 24/109 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
NAPVF +Y+ + E P+ + VI LK +D D G N+++S + GG+ G F I+
Sbjct: 374 NAPVFERELYEVNIAETAPVNSPVIKLKVSDKD-EGKNAQVSLEIVGGNEGGEFRINKRT 432
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
G L Y VVL R Y LT+ A+D+G
Sbjct: 433 GML------------------YTAVVLDAEHRS----SYTLTVSAIDQG 459
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 49/112 (43%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F ++ + ++ EN+P GT V+ + A D D G N ISYS+
Sbjct: 481 NDPLFEKYLMEVSINENEPAGTSVVKISARDKD-SGENGYISYSIA-------------- 525
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ + VP ID T I LLD E Y L +RA D G P R
Sbjct: 526 ---NLKPVPFDIDHFTGL----IKTTHLLDFETMRREYVLHIRASDWGYPYR 570
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF+ + Y A+V + V+ L A D D PG +K++YS+ GG+ +TID
Sbjct: 1937 PVFTSYEYNASVLIPTYVNVAVVQLNATDGDSPGQ-TKLTYSIIGGNEANVYTID 1990
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 48/118 (40%), Gaps = 24/118 (20%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P +F V E+ P+G ++ ++A D D G N K+ Y V GD F ID E
Sbjct: 737 VHKPELVNFPSAVQVNESVPLGYTILAIRARDRDL-GYNGKLVYGVSDGDDDSLFRIDPE 795
Query: 61 -GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
G LN V+ LDRE Y L + D G P T+K
Sbjct: 796 TGDLN---------------------VVGYLDRETRD-EYELNVTVSDLGKPQHTTWK 831
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y A V E++ G +V L DAD +Y +R D F+ID +G
Sbjct: 3492 NPPLFSQHNYSAFVHEDKKPGWIVCQLSVTDADLEPNGGPFTYDIRNNDDGNAFSIDPDG 3551
Query: 62 PL 63
+
Sbjct: 3552 TV 3553
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
+P+F VY+ T+ E+ P+ + V+ + A DAD GMN +I YS +
Sbjct: 161 SPLFYPVVYEKTIPEDTPLHSSVLKVSAEDAD-IGMNGEIYYSFK 204
>gi|442633558|ref|NP_001027138.2| kugelei, isoform D [Drosophila melanogaster]
gi|440216049|gb|AAZ66056.2| kugelei, isoform D [Drosophila melanogaster]
Length = 4699
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 57/96 (59%), Gaps = 6/96 (6%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP F DFVY+ VKEN+P GT V+ + A D D +NSKI+YS+ GGDGLG F ++++G
Sbjct: 1085 APEFDDFVYEGKVKENKPKGTFVMNVTARDMDTVDLNSKITYSITGGDGLGIFAVNDQGS 1144
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG 98
+ +++D TK + + L D I PL
Sbjct: 1145 ITSL----SQLDAETKN--FYWLTLCAQDCAIVPLS 1174
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F +Y+ V E+ +G+ ++ +KA D D +N ++Y++ GD +G F+ID
Sbjct: 3374 NSPTFLQNLYRINVNEDIFVGSKILDVKATDED-SDVNGLVTYNIERGDNIGQFSID--- 3429
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P N GT I V + LDRE Y L ++A D+G P R
Sbjct: 3430 PKN-----------GT------ISVSRPLDRETIS-HYTLEIQACDQGDPQR 3463
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS Y ++EN+ +G + +T K +DAD + ++ +R G+ G F ++ +G
Sbjct: 3479 NAPIFSSSNYSVVLQENRLLGYVFLTFKISDADETPNTTPYTFDIRSGNEGGLFRLEQDG 3538
Query: 62 PL 63
L
Sbjct: 3539 SL 3540
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 54/123 (43%), Gaps = 23/123 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y+ +V E+ + TL+ + A D D G+N +I YS+ G+ YF I
Sbjct: 3165 NMPIFSMAQYRVSVPEDAQLNTLITKVHAMDKD-FGVNRQIKYSLM-GENHDYFKISKST 3222
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ I + K LDRE L +NLT++A D G P +
Sbjct: 3223 GI--------------------IRLHKSLDRETISL-FNLTVKAEDCGVPKLHSIATVAV 3261
Query: 122 NGL 124
N L
Sbjct: 3262 NIL 3264
Score = 42.7 bits (99), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 48/113 (42%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F + ++ EN G+ V+ L A D D G NS ISYS+ + + +
Sbjct: 503 NDPIFENVNKVISINENNLAGSFVVKLTAKDRDS-GENSYISYSIANLNAVPF------- 554
Query: 62 PLNHFR-IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
++HF IV T LLD E Y L +RA D G P R
Sbjct: 555 EIDHFSGIVKTT---------------SLLDFETMKRNYELIIRASDWGLPYR 592
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS Y + EN GT V + A D G+N+ I Y + G+ G F
Sbjct: 3269 NPPEFSMRQYSCKILENATHGTEVCKVYATSIDI-GVNADIHYFIMSGNEQGKF------ 3321
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+D T ++V+ LD E++ Y LT++A+D GTPP
Sbjct: 3322 ----------KMDSTTG----DLVLNATLDYEMSKF-YFLTIQAIDGGTPP 3357
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 50/108 (46%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y+ ++ E PI VI LK +D D G N+ + + GG NEG
Sbjct: 396 NIPIFTQEIYEVSIPETAPINMPVIRLKVSDPD-LGKNALVYLEIVGG---------NEG 445
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ FRI P D G + K LD E Y LT+ A+D+
Sbjct: 446 --DEFRINP---DSGM------LYTAKQLDAE-KKSSYTLTVSAIDQA 481
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 11/89 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N+P F VY+ V + + + + A D+D G N +I+YS++ G G F ID++
Sbjct: 1295 NSPEFDQRVYKVQVPSSATVNQSIFQVHAIDSDS-GENGRITYSIKSGKGKNKFRIDSQR 1353
Query: 61 ------GPL---NHFRIVPTKIDPGTKKK 80
PL N F I D G KK
Sbjct: 1354 GHIHIAKPLDSDNEFEIHIKAEDNGIPKK 1382
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG 51
N P+F + Y ATV + P GT+++ +KA D D N ++ Y ++ G+G
Sbjct: 2136 NCPLFVNMPYYATVSIDDPKGTIIMQVKAIDLD-SAENGEVRYELKKGNG 2184
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P+F Y+A V EN G +IT+KA+D D G + + Y + + F ID
Sbjct: 2548 SPLFDQSTYEAQVPENLLHGHNIITVKASDGD-FGTYANLYYEIVSEEMKKIFLIDQTTG 2606
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLD 91
++ +K+ +KK+ +V+LK+ D
Sbjct: 2607 -----VITSKVTFDREKKDEYVVLLKVSD 2630
>gi|25090328|sp|Q9VW71.2|FAT2_DROME RecName: Full=Fat-like cadherin-related tumor suppressor homolog;
AltName: Full=Protein kugelei; Flags: Precursor
Length = 4705
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 57/96 (59%), Gaps = 6/96 (6%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP F DFVY+ VKEN+P GT V+ + A D D +NSKI+YS+ GGDGLG F ++++G
Sbjct: 1082 APEFDDFVYEGKVKENKPKGTFVMNVTARDMDTVDLNSKITYSITGGDGLGIFAVNDQGS 1141
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG 98
+ +++D TK + + L D I PL
Sbjct: 1142 ITSL----SQLDAETKN--FYWLTLCAQDCAIVPLS 1171
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F +Y+ V E+ +G+ ++ +KA D D +N ++Y++ GD +G F+ID
Sbjct: 3390 NSPTFLQNLYRINVNEDIFVGSKILDVKATDED-SDVNGLVTYNIERGDNIGQFSID--- 3445
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P N GT I V + LDRE Y L ++A D+G P R
Sbjct: 3446 PKN-----------GT------ISVSRPLDRETIS-HYTLEIQACDQGDPQR 3479
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS Y ++EN+ +G + +T K +DAD + ++ +R G+ G F ++ +G
Sbjct: 3495 NAPIFSSSNYSVVLQENRLLGYVFLTFKISDADETPNTTPYTFDIRSGNEGGLFRLEQDG 3554
Query: 62 PL 63
L
Sbjct: 3555 SL 3556
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 54/123 (43%), Gaps = 23/123 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y+ +V E+ + TL+ + A D D G+N +I YS+ G+ YF I
Sbjct: 3181 NMPIFSMAQYRVSVPEDAQLNTLITKVHAMDKD-FGVNRQIKYSLM-GENHDYFKISKST 3238
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ I + K LDRE L +NLT++A D G P +
Sbjct: 3239 GI--------------------IRLHKSLDRETISL-FNLTVKAEDCGVPKLHSIATVAV 3277
Query: 122 NGL 124
N L
Sbjct: 3278 NIL 3280
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 48/113 (42%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F + ++ EN G+ V+ L A D D G NS ISYS+ + + +
Sbjct: 500 NDPIFENVNKVISINENNLAGSFVVKLTAKDRDS-GENSYISYSIANLNAVPF------- 551
Query: 62 PLNHFR-IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
++HF IV T LLD E Y L +RA D G P R
Sbjct: 552 EIDHFSGIVKTT---------------SLLDFETMKRNYELIIRASDWGLPYR 589
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS Y + EN GT V + A D G+N+ I Y + G+ G F
Sbjct: 3285 NPPEFSMRQYSCKILENATHGTEVCKVYATSIDI-GVNADIHYFIMSGNEQGKF------ 3337
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+D T ++V+ LD E++ Y LT++A+D GTPP
Sbjct: 3338 ----------KMDSTTG----DLVLNATLDYEMSKF-YFLTIQAIDGGTPP 3373
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 50/108 (46%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y+ ++ E PI VI LK +D D G N+ + + GG NEG
Sbjct: 393 NIPIFTQEIYEVSIPETAPINMPVIRLKVSDPD-LGKNALVYLEIVGG---------NEG 442
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ FRI P D G + K LD E Y LT+ A+D+
Sbjct: 443 --DEFRINP---DSGM------LYTAKQLDAE-KKSSYTLTVSAIDQA 478
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 11/89 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N+P F VY+ V + + + + A D+D G N +I+YS++ G G F ID++
Sbjct: 1292 NSPEFDQRVYKVQVPSSATVNQSIFQVHAIDSDS-GENGRITYSIKSGKGKNKFRIDSQR 1350
Query: 61 ------GPL---NHFRIVPTKIDPGTKKK 80
PL N F I D G KK
Sbjct: 1351 GHIHIAKPLDSDNEFEIHIKAEDNGIPKK 1379
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG 51
N P+F + Y ATV + P GT+++ +KA D D N ++ Y ++ G+G
Sbjct: 2133 NCPLFVNMPYYATVSIDDPKGTIIMQVKAIDLD-SAENGEVRYELKKGNG 2181
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P+F Y+A V EN G +IT+KA+D D G + + Y + + F ID
Sbjct: 2564 SPLFDQSTYEAQVPENLLHGHNIITVKASDGD-FGTYANLYYEIVSEEMKKIFLIDQTTG 2622
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLD 91
++ +K+ +KK+ +V+LK+ D
Sbjct: 2623 -----VITSKVTFDREKKDEYVVLLKVSD 2646
>gi|442633556|ref|NP_649171.3| kugelei, isoform C [Drosophila melanogaster]
gi|440216048|gb|AAF49078.3| kugelei, isoform C [Drosophila melanogaster]
Length = 4689
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 57/96 (59%), Gaps = 6/96 (6%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP F DFVY+ VKEN+P GT V+ + A D D +NSKI+YS+ GGDGLG F ++++G
Sbjct: 1085 APEFDDFVYEGKVKENKPKGTFVMNVTARDMDTVDLNSKITYSITGGDGLGIFAVNDQGS 1144
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG 98
+ +++D TK + + L D I PL
Sbjct: 1145 ITSL----SQLDAETKN--FYWLTLCAQDCAIVPLS 1174
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F +Y+ V E+ +G+ ++ +KA D D +N ++Y++ GD +G F+ID
Sbjct: 3374 NSPTFLQNLYRINVNEDIFVGSKILDVKATDED-SDVNGLVTYNIERGDNIGQFSID--- 3429
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P N GT I V + LDRE Y L ++A D+G P R
Sbjct: 3430 PKN-----------GT------ISVSRPLDRETIS-HYTLEIQACDQGDPQR 3463
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS Y ++EN+ +G + +T K +DAD + ++ +R G+ G F ++ +G
Sbjct: 3479 NAPIFSSSNYSVVLQENRLLGYVFLTFKISDADETPNTTPYTFDIRSGNEGGLFRLEQDG 3538
Query: 62 PL 63
L
Sbjct: 3539 SL 3540
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 54/123 (43%), Gaps = 23/123 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y+ +V E+ + TL+ + A D D G+N +I YS+ G+ YF I
Sbjct: 3165 NMPIFSMAQYRVSVPEDAQLNTLITKVHAMDKD-FGVNRQIKYSLM-GENHDYFKISKST 3222
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ I + K LDRE L +NLT++A D G P +
Sbjct: 3223 GI--------------------IRLHKSLDRETISL-FNLTVKAEDCGVPKLHSIATVAV 3261
Query: 122 NGL 124
N L
Sbjct: 3262 NIL 3264
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 48/113 (42%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F + ++ EN G+ V+ L A D D G NS ISYS+ + + +
Sbjct: 503 NDPIFENVNKVISINENNLAGSFVVKLTAKDRDS-GENSYISYSIANLNAVPF------- 554
Query: 62 PLNHFR-IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
++HF IV T LLD E Y L +RA D G P R
Sbjct: 555 EIDHFSGIVKTT---------------SLLDFETMKRNYELIIRASDWGLPYR 592
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS Y + EN GT V + A D G+N+ I Y + G+ G F
Sbjct: 3269 NPPEFSMRQYSCKILENATHGTEVCKVYATSIDI-GVNADIHYFIMSGNEQGKF------ 3321
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+D T ++V+ LD E++ Y LT++A+D GTPP
Sbjct: 3322 ----------KMDSTTG----DLVLNATLDYEMSKF-YFLTIQAIDGGTPP 3357
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 50/108 (46%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y+ ++ E PI VI LK +D D G N+ + + GG NEG
Sbjct: 396 NIPIFTQEIYEVSIPETAPINMPVIRLKVSDPD-LGKNALVYLEIVGG---------NEG 445
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ FRI P D G + K LD E Y LT+ A+D+
Sbjct: 446 --DEFRINP---DSGM------LYTAKQLDAE-KKSSYTLTVSAIDQA 481
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 11/89 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N+P F VY+ V + + + + A D+D G N +I+YS++ G G F ID++
Sbjct: 1295 NSPEFDQRVYKVQVPSSATVNQSIFQVHAIDSDS-GENGRITYSIKSGKGKNKFRIDSQR 1353
Query: 61 ------GPL---NHFRIVPTKIDPGTKKK 80
PL N F I D G KK
Sbjct: 1354 GHIHIAKPLDSDNEFEIHIKAEDNGIPKK 1382
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG 51
N P+F + Y ATV + P GT+++ +KA D D N ++ Y ++ G+G
Sbjct: 2136 NCPLFVNMPYYATVSIDDPKGTIIMQVKAIDLD-SAENGEVRYELKKGNG 2184
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P+F Y+A V EN G +IT+KA+D D G + + Y + + F ID
Sbjct: 2548 SPLFDQSTYEAQVPENLLHGHNIITVKASDGD-FGTYANLYYEIVSEEMKKIFLIDQTTG 2606
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLD 91
++ +K+ +KK+ +V+LK+ D
Sbjct: 2607 -----VITSKVTFDREKKDEYVVLLKVSD 2630
>gi|194874570|ref|XP_001973423.1| GG16079 [Drosophila erecta]
gi|190655206|gb|EDV52449.1| GG16079 [Drosophila erecta]
Length = 4446
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 6/96 (6%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP F DFVY+ +KEN+P GT V+ + A D D +NSKI+YS+ GGDGLG F ++++G
Sbjct: 938 APEFDDFVYEGKIKENKPKGTFVMNVSARDMDTVDLNSKITYSITGGDGLGIFAVNDQGS 997
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG 98
+ +++D TK + + L D I PL
Sbjct: 998 ITSL----SQLDAETKN--FYWLTLCAQDCAIVPLS 1027
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F +Y+ V E+ +G+ ++ +KA D D +N ++Y++ GD +G F+ID
Sbjct: 3135 NSPKFLQNLYRVNVNEDIFVGSKILDIKATDED-SDINGLVTYNIEKGDNIGQFSID--- 3190
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P N GT I V + LDRE P Y L ++A D+G P R
Sbjct: 3191 PKN-----------GT------ISVSRPLDRETIP-HYTLEIQACDQGNPQR 3224
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS Y ++EN+P+G + +T K DAD + ++ +R G+ G F ++ +G
Sbjct: 3240 NAPIFSSANYSVVLQENRPLGYVFLTFKITDADESPNTTPYTFDIRSGNEGGLFRLEQDG 3299
Query: 62 PLN 64
L+
Sbjct: 3300 SLS 3302
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 48/113 (42%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F + ++ EN G+ V+ L A D D G NS ISYS+ + + +
Sbjct: 500 NDPIFENVNKVISINENNLAGSFVVKLTAKDRDS-GENSYISYSIANLNAVPF------- 551
Query: 62 PLNHFR-IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
++HF IV T LLD E Y L +RA D G P R
Sbjct: 552 EIDHFSGIVKTT---------------SLLDFETMKRNYELIIRASDWGLPYR 589
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 54/124 (43%), Gaps = 25/124 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y+ + E+ + TL+ + A D D G+N +I YS+ G+ YF I
Sbjct: 2926 NTPIFSMAQYRVSAPEDAQLNTLITKVHAMDKD-FGVNRQIKYSLM-GENHDYFKI---- 2979
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVL-KLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
K I+ L K LDRE L +NLT++A D G P +
Sbjct: 2980 -----------------SKSTGIIRLDKSLDRETISL-FNLTVKAEDCGVPKLHSIATVA 3021
Query: 121 RNGL 124
N L
Sbjct: 3022 VNIL 3025
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS Y + EN GT V + A D G+N+ I Y + G+ G F
Sbjct: 3030 NPPEFSMRQYSCEILENATHGTEVCKVYATSIDI-GVNADIHYFIMSGNEQGKF------ 3082
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+D T ++V+ LD E++ Y LT++A+D GTPP
Sbjct: 3083 ----------KMDSTTG----DLVLNATLDYEMSKF-YFLTIQAIDGGTPP 3118
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 11/89 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N+P F VY+ V + + + + A D+D G N +I+YS++ G G F ID++
Sbjct: 1148 NSPEFDQRVYKVQVPSSATVNQSIFQVHAIDSDS-GENGRITYSIKSGKGKNKFRIDSQR 1206
Query: 61 ------GPL---NHFRIVPTKIDPGTKKK 80
PL N F I D G KK
Sbjct: 1207 GHIHIAKPLDSDNEFEIHIKAEDSGIPKK 1235
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 50/108 (46%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y+ ++ E PI VI LK +D D G N+ + + GG NEG
Sbjct: 393 NIPIFTQEIYEVSIPETAPINMPVIRLKVSDPD-LGKNALVYLEIVGG---------NEG 442
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ FRI P D G + K LD E Y LT+ A+D+
Sbjct: 443 --DEFRINP---DSGM------LYTAKQLDAE-KKSSYTLTVSAIDQA 478
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG 51
N P+F + Y ATV + P GT+++ +KA D D N ++ Y ++ G+G
Sbjct: 1988 NCPLFVNMPYYATVSIDDPKGTIIMQVKAVDLD-SAENGEVRYELKKGNG 2036
>gi|195022843|ref|XP_001985650.1| GH17186 [Drosophila grimshawi]
gi|193899132|gb|EDV97998.1| GH17186 [Drosophila grimshawi]
Length = 4534
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 58/96 (60%), Gaps = 6/96 (6%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP F DFV++ ++EN P GTLV+ + A D D +NSKISYS+ GGDGLG F+++++G
Sbjct: 936 APEFEDFVFEGKIRENMPKGTLVMKIAARDMDGMDLNSKISYSITGGDGLGIFSVNDQGS 995
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG 98
++ T++D + K + + L D I P
Sbjct: 996 IHSL----TQLDA--ESKNFYWLTLCAQDNAIVPFS 1025
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS Y ++EN+P+G + I +DAD ++ +Y +R G+ G F ++ +G
Sbjct: 3328 NAPIFSQTNYSIVLQENRPLGYVFIKFDVSDADEEPNSTPYTYDIRSGNEGGLFRLEQDG 3387
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
L + +N KL D I + +R D GTPP+
Sbjct: 3388 SL-------------STASRFN---HKLRDEFI------IQIRVFDNGTPPQ 3417
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 51/110 (46%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS Y+ +++E+ + TLV + A D D GMN KI YS+ G + YF
Sbjct: 3014 NAPIFSLTNYRVSIQEDAQLQTLVTKVHATDKD-FGMNRKIKYSLTGTNS-DYF------ 3065
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
G K I + K LDRE L YN T++ D G P
Sbjct: 3066 --------------GISKSTGIIKLEKNLDRETISL-YNFTVKVEDFGKP 3100
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ +Y+ +V+E+ + +I +KA D D +N I Y++ GD L F I++
Sbjct: 3223 NTPTFTQNIYRTSVREDISVNLPIIDVKATDED-SNLNGIIKYNIVKGDSLSQFRINHSN 3281
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
GT I + + LDRE Y L ++A D G P R
Sbjct: 3282 --------------GT------ISLARPLDRETIS-DYVLEVQACDFGIPER 3312
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 22/110 (20%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+++P F + VY+AT+ EN G VIT+KA D D G + + Y + + YF I+
Sbjct: 2394 VHSPQFENIVYKATIMENLAHGHEVITVKAVD-DDFGQYASLYYEIVSEEMKQYFEINRN 2452
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGT 110
L + +K+ DREI Y L L+A+D G+
Sbjct: 2453 TGL-----ITSKVS---------------FDREIKD-EYVLQLKAIDGGS 2481
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F + + EN+ G++V L A D D G N+ ISYS+ + + +
Sbjct: 354 NDPIFENINRIIYINENELAGSIVTKLTAKDKD-SGENAYISYSIANLNEVPF------- 405
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
++HF V I L+D E Y L +RA D G P R
Sbjct: 406 EIDHFSGV--------------IKTTNLIDYETMRRNYTLLVRASDWGLPYR 443
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 21/43 (48%)
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
P K EY I + K YNLTLRA D G P R T+K
Sbjct: 193 PAEAKDEYYIELNKFASLNEQQFAYNLTLRAEDFGIPSRSTFK 235
Score = 35.4 bits (80), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y+ ++ E P+ VI LK +D D G + + V GG NEG
Sbjct: 247 NVPIFTQEIYEVSIPETAPVNMPVIRLKVSDPD-LGKYALVYLEVVGG---------NEG 296
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
FRI P D G + K LD E Y LT+ A+D+
Sbjct: 297 --GEFRINP---DSGM------LYTQKRLDAETKS-SYTLTVSAIDQA 332
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 48/114 (42%), Gaps = 20/114 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F + +Y V EN ++ + A DAD G N + Y YF ++ G
Sbjct: 2704 NYPKFDNTIYSCEVAENTEKVASILKVTATDAD-TGSNGDVRY---------YFDEESNG 2753
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ F I I G I +L LDRE+ YNL + A D G P ++
Sbjct: 2754 IRSIFDI---DIYTGW------ITLLSSLDREVQS-EYNLKVIATDNGHPKHDS 2797
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N+PVF VY+ V I + + A D D G N +I+YS++ G F ID+
Sbjct: 1146 NSPVFDQRVYKVQVPSTTYINESIFQVHAIDNDD-GENGRITYSIKSGKKKNKFRIDS 1202
>gi|194748040|ref|XP_001956457.1| GF24582 [Drosophila ananassae]
gi|190623739|gb|EDV39263.1| GF24582 [Drosophila ananassae]
Length = 1581
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 6/96 (6%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP F DFVY+ +KEN+P GT V+ + A D D +NSKI+YS+ GGDGLG F ++++G
Sbjct: 224 APEFEDFVYEGRIKENKPKGTFVMNVTARDLDTVDLNSKITYSITGGDGLGIFAVNDQGS 283
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG 98
+ +++D TK + + L D I PL
Sbjct: 284 ITSL----SQLDAETKN--FYWLTLCAQDSAIVPLS 313
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG 51
N P+F + Y ATV + P GT+++ +KA D D N ++ Y ++ G+G
Sbjct: 1274 NCPLFVNMPYYATVSIDDPKGTIIMQVKAVDLD-SAENGEVRYELKKGNG 1322
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 11/89 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N+P F VY+ V + + + + A D+D G N +I+YS++ G G F ID++
Sbjct: 434 NSPEFDLRVYKVQVPTSATVNQSIFQVHAIDSDD-GDNGRITYSIKSGKGKNKFRIDSQR 492
Query: 61 ------GPL---NHFRIVPTKIDPGTKKK 80
PL N F I D G KK
Sbjct: 493 GHIYIAKPLESDNEFEIHIKAEDNGIPKK 521
>gi|195354340|ref|XP_002043656.1| GM19748 [Drosophila sechellia]
gi|194127824|gb|EDW49867.1| GM19748 [Drosophila sechellia]
Length = 1591
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 6/96 (6%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP F DFVY+ +KEN+P GT V+ + A D D +NSKI+YS+ GGDGLG F ++++G
Sbjct: 287 APEFDDFVYEGKIKENKPKGTFVMNVTARDMDTVDLNSKITYSITGGDGLGIFAVNDQGS 346
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG 98
+ +++D TK + + L D I PL
Sbjct: 347 ITSL----SQLDAETKN--FYWLTLCAQDCAIVPLS 376
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 11/89 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N+P F VY+ V + + + + A D+D G N +I+YS++ G G F ID++
Sbjct: 497 NSPEFDQRVYKVQVPSSATVNQSIFQVHAIDSDS-GENGRITYSIKSGKGKNKFRIDSQR 555
Query: 61 ------GPL---NHFRIVPTKIDPGTKKK 80
PL N F I D G KK
Sbjct: 556 GHLHIAKPLDSDNEFEIHIKAEDNGIPKK 584
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG 51
N P+F + Y ATV + P GT+++ +KA D D N ++ Y ++ G+G
Sbjct: 1266 NCPLFVNMPYYATVSIDDPKGTIIMQVKAVDLD-SAENGEVRYELKKGNG 1314
>gi|195591703|ref|XP_002085578.1| GD14850 [Drosophila simulans]
gi|194197587|gb|EDX11163.1| GD14850 [Drosophila simulans]
Length = 1459
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 6/96 (6%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP F DFVY+ +KEN+P GT V+ + A D D +NSKI+YS+ GGDGLG F ++++G
Sbjct: 763 APEFDDFVYEGKIKENKPKGTFVMNVTARDMDTVDLNSKITYSITGGDGLGIFAVNDQGS 822
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG 98
+ +++D TK + + L D I PL
Sbjct: 823 ITSL----SQLDAETKN--FYWLTLCAQDCAIVPLS 852
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 48/113 (42%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F + ++ EN G+ V+ L A D D G NS ISYS+ + + +
Sbjct: 500 NDPIFENVNKVISINENNLAGSFVVKLTAKDRDS-GENSYISYSIANLNAVPF------- 551
Query: 62 PLNHFR-IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
++HF IV T LLD E Y L +RA D G P R
Sbjct: 552 EIDHFSGIVKTT---------------SLLDFETMKRNYELIIRASDWGLPYR 589
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 50/108 (46%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y+ ++ E PI VI LK +D D G N+ + + GG NEG
Sbjct: 393 NIPIFTQEIYEVSIPETAPINMPVIRLKVSDPD-LGKNALVYLEIVGG---------NEG 442
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ FRI P D G + K LD E Y LT+ A+D+
Sbjct: 443 --DEFRINP---DSGM------LYTAKQLDAE-KKSSYTLTVSAIDQA 478
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 11/89 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N+P F VY+ V + + + + A D+D G N +I+YS++ G G F ID++
Sbjct: 973 NSPEFDQRVYKVQVPSSATVNQSIFQVHAIDSDS-GENGRITYSIKSGKGKNKFRIDSQR 1031
Query: 61 ------GPL---NHFRIVPTKIDPGTKKK 80
PL N F I D G KK
Sbjct: 1032 GHIHIAKPLDSDNEFEIHIKAEDNGIPKK 1060
>gi|195496048|ref|XP_002095528.1| GE19644 [Drosophila yakuba]
gi|194181629|gb|EDW95240.1| GE19644 [Drosophila yakuba]
Length = 3884
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/95 (41%), Positives = 57/95 (60%), Gaps = 6/95 (6%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP F DFVY+ +KEN+P GT V+ + A D D +NSKI+YS+ GGDGLG F ++++G
Sbjct: 280 APEFDDFVYEGKIKENKPKGTFVMNVTARDMDTVDLNSKITYSITGGDGLGIFAVNDQGS 339
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPL 97
+ +++D TK + + L D I PL
Sbjct: 340 ITSL----SQLDAETKN--FYWLTLCAQDCAIVPL 368
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 37/63 (58%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS Y ++EN+ +G + +T K +DAD + ++ +R G+ G F ++ +G
Sbjct: 2674 NAPIFSSANYSVVLQENRRLGYIFLTFKISDADESPNTTPYTFDIRSGNEGGLFRLEQDG 2733
Query: 62 PLN 64
L+
Sbjct: 2734 SLS 2736
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F +Y+ V E+ +G+ ++ +KA D D +N ++Y++ GD +G F+I+
Sbjct: 2569 NSPKFLQNLYRINVNEDIFVGSKILDIKATDED-SDVNGLVTYNIEKGDNIGQFSIE--- 2624
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
K I V + LDRE Y L ++A D+G P R
Sbjct: 2625 -----------------PKNGTISVSRPLDRETIS-HYTLEIQACDQGNPQR 2658
Score = 43.1 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 25/111 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y+ +V E+ + TL+ + A D D G+N +I YS+ G+ YF I
Sbjct: 2360 NTPIFSMAQYRVSVPEDAQLNTLITKVHAMDKD-FGLNRQIKYSLM-GENHDYFKI---- 2413
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVL-KLLDREIAPLGYNLTLRAVDKGTP 111
K I+ L K LDRE L +NLT++A D G P
Sbjct: 2414 -----------------SKSTGIIRLDKSLDRETISL-FNLTVKAEDCGVP 2446
Score = 38.9 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG 51
N P+F + Y ATV + P GT+++ +KA D D N ++ Y ++ G+G
Sbjct: 1331 NCPLFVNMPYYATVSIDDPKGTIIMQVKAVDLD-SAENGEVRYELKKGNG 1379
Score = 38.5 bits (88), Expect = 0.85, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 11/89 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N P F VY+ V + + + + A D+D G N +I+YS++ G G F ID++
Sbjct: 490 NGPEFDQRVYKVQVPSSAAVNQSIYQVHAIDSDS-GENGRITYSIKSGKGKNKFRIDSQR 548
Query: 61 ------GPL---NHFRIVPTKIDPGTKKK 80
PL N F I D G KK
Sbjct: 549 GHIHIAKPLDSDNEFEIHIKAEDNGIPKK 577
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS Y + EN GT V + A D G+N+ I Y + G+ G F +D+
Sbjct: 2464 NPPEFSMRQYSCKILENATHGTEVCKVYATSIDI-GVNADIHYFIMSGNEQGKFKMDSTT 2522
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
++V+ LD E++ Y LT++A+D G+PP
Sbjct: 2523 G--------------------DLVLNATLDYEMSKF-YFLTIQAIDGGSPP 2552
>gi|170067416|ref|XP_001868472.1| cadherin [Culex quinquefasciatus]
gi|167863548|gb|EDS26931.1| cadherin [Culex quinquefasciatus]
Length = 948
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP F DFV ++ EN+P G V+ + A D DPPG +S++SYS++GGDGLG F IDNE
Sbjct: 874 APQFEDFVLIGSITENKPPGAHVMQVTAKDLDPPGPDSRVSYSIKGGDGLGIFAIDNEAL 933
Query: 63 LNHFR 67
+ R
Sbjct: 934 IGESR 938
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 39/59 (66%), Gaps = 5/59 (8%)
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
P HFRI T + E+ I V +LLDRE AP+GYNLTLRAVD+G P R++YK P
Sbjct: 118 PDGHFRIKATG-----RGGEFVIEVHRLLDRETAPVGYNLTLRAVDRGVPSRQSYKVIP 171
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 23/111 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNE 60
NAP FS ++E+ P GT+V+ + A D D G +S+I YS GDG G F ID
Sbjct: 765 NAPEFSIQDLSVRIREDVPKGTVVMVVSAVDLDS-GPSSEILYSFGENGDGEGSFKID-- 821
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K+ I K+LD E + ++L ++A+D+GTP
Sbjct: 822 ------------------KQSGTIRTAKMLDFEERQI-HSLIVKAIDRGTP 853
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ +Y+ +V E P T VI LK D D G N+++ + GG+ G F ++ E
Sbjct: 180 NAPVFNREIYEVSVPETSPPNTPVIRLKVTDRD-EGKNAQVFLEIVGGNEGGEFRVNPET 238
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ + VP LD E+ Y LT+ A+D+G
Sbjct: 239 GM-LYTAVP-------------------LDAELKAF-YTLTVSAIDQG 265
Score = 40.0 bits (92), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++AP F D + V E+ P+GT + +KA D D G N K+ + + GGD F +D
Sbjct: 552 VHAPEFVDLPLEVKVNESIPLGTTITWIKARDRD-LGYNGKLVFGISGGDDDSVFRLD 608
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 47/112 (41%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F V EN+P GT V + A D D G N+ ISYS+ + + +
Sbjct: 287 NDPIFEINNMTIKVDENEPAGTTVTKVTARDKD-LGENAYISYSIANLNDVPF------- 338
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
++HF V + KLLD E Y L +RA D G P R
Sbjct: 339 DIDHFSGV--------------VRTSKLLDYESMRREYILRVRASDWGLPYR 376
>gi|157128508|ref|XP_001661461.1| cadherin [Aedes aegypti]
gi|108872550|gb|EAT36775.1| AAEL011166-PA, partial [Aedes aegypti]
Length = 1088
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 42/58 (72%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
AP F DFV T+ EN+P G V+ + A D DPPG +S+++YS++GGDGLG F IDNE
Sbjct: 1031 APQFDDFVLIGTITENKPPGAHVMQVVAKDNDPPGPDSRVNYSIKGGDGLGIFAIDNE 1088
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 41/59 (69%), Gaps = 5/59 (8%)
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
P HFRI PT PG E+ I V +LLDRE AP GYNLTL+AVD+G PP+++YK P
Sbjct: 275 PDGHFRIKPTA-RPG----EFVIEVHRLLDRESAPAGYNLTLKAVDRGIPPKKSYKTIP 328
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 52/111 (46%), Gaps = 23/111 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNE 60
NAP FS ++E+ P GT+V + A D D G NS+I YS GDG G F ID
Sbjct: 922 NAPEFSVQDLNVRIREDVPKGTVVTVVSAIDLD-SGPNSEIMYSFGENGDGEGSFRID-- 978
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I KLLD E + ++L ++A+D+GTP
Sbjct: 979 ------------------KLSGTIRTAKLLDFEERQV-HSLIVKAIDRGTP 1010
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ +Y+ +V E P T VI LK D D G N+++ + GG+ G F ++ E
Sbjct: 337 NAPVFNREIYEVSVPETSPPNTPVIRLKVTDRD-EGKNAQVFLEIVGGNEGGEFRVNPET 395
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ + VP LD E+ Y LT+ A+D+G
Sbjct: 396 GM-LYTAVP-------------------LDAEMKAF-YTLTVSAIDQG 422
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++AP F + + V E+ P+GT V +KA D D G N K+ + + GGD F +D
Sbjct: 709 VHAPEFVELPMEVKVNESIPLGTTVTWIKARDRD-LGYNGKLVFGISGGDDDSVFRLD 765
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 48/113 (42%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F V EN+P GT V + A D D G N+ ISYS+ + + +
Sbjct: 444 NDPIFETNNMTIWVDENEPAGTTVTKVTARDKD-LGENAYISYSIANLNDVPF------- 495
Query: 62 PLNHFR-IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
++HF IV T KLLD E Y L +RA D G P R
Sbjct: 496 DIDHFSGIVRTS---------------KLLDYESMRREYVLRVRASDWGLPYR 533
>gi|327270405|ref|XP_003219980.1| PREDICTED: protocadherin gamma-B5-like [Anolis carolinensis]
Length = 1545
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 46/117 (39%), Positives = 66/117 (56%), Gaps = 7/117 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS +Y+ ++KEN PIG V+ +KA+D+D G+N++I+Y+ T
Sbjct: 241 NAPVFSQAMYKVSLKENVPIGMSVLQVKASDSD-EGLNAEITYTFSDIQE----TXXXXX 295
Query: 62 PLNHFR-IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
H + VP +I + ++ LDRE AP YN+T+ A DKGTPP TYK
Sbjct: 296 XXCHLQEFVPFQIALVRSDDYFKLLTDGQLDRESAP-EYNITITATDKGTPPLSTYK 351
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 17/111 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y EN P GT + T+KA+D D G+N+KI+YS+ + + E
Sbjct: 1144 NAPAFEKSSYSIFTPENNPAGTALFTIKASDPD-VGLNAKITYSI-------FNSNIQEL 1195
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P++ + + T+ ++ ++ + + L ++A D G+PP
Sbjct: 1196 PISSYISINTETGTIYAQRSFDYEEFR---------EFQLQVKAQDGGSPP 1237
Score = 43.1 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 22/116 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP + ++V EN P GT V L D D G+N +++ S+
Sbjct: 1039 NAPELTMTFAISSVPENSPKGTTVAILNVRDRDS-GVNGQVTCSI--------------- 1082
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
P N +P ++ T+ Y +V + LDRE YN+T+ A D+GTPP T K
Sbjct: 1083 PSN----LPFQLKK-TQDDFYTLVTERPLDREEIS-EYNITITATDRGTPPLSTQK 1132
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
NAP+F Y+A+V EN P T + ++A D D G+N++I YS +
Sbjct: 934 NAPIFGQSAYEASVNENIPKWTTIAVVRATDLD-EGINAEIKYSFQ 978
>gi|348520328|ref|XP_003447680.1| PREDICTED: protocadherin Fat 2-like [Oreochromis niloticus]
Length = 4457
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 45/116 (38%), Positives = 63/116 (54%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVFS+FVY+A VKE+ +GT V+TL A+D D G + + Y + G GLG FTID E
Sbjct: 1020 LHRPVFSEFVYEALVKEDSAVGTSVVTLTASDKD-LGRDGVVRYRIHDGSGLGVFTIDEE 1078
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I + ++LDRE AP Y L++ A D GT P T+
Sbjct: 1079 TGV--------------------IRMTEMLDRETAP-HYWLSVYATDLGTEPLITW 1113
Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 39/111 (35%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y A V E+ G LV+ + A D D P +N+ + YS+ GD L F+ID
Sbjct: 3315 NPPVFGRSDYSAEVSEDLTPGRLVMKVTATDEDGP-VNNLLRYSIVSGDLLQQFSID--- 3370
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ +I V LDRE P Y+LT++A D+G+PP
Sbjct: 3371 -----------------ARSGDITVRTALDREEIP-HYSLTVQAADEGSPP 3403
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F+ YQAT+ EN P+G+ V+ + A+D D +G +G +TI N G
Sbjct: 454 NSPQFTQTSYQATLDENSPVGSSVLKVAASDKD------------KGKNGFVTYTIANSG 501
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
PL P IDP T I + LD E+ Y+L + A D G P
Sbjct: 502 PL------PFTIDPFTGI----ISTSEHLDYELMKRRYHLRVWASDSGGP 541
Score = 42.4 bits (98), Expect = 0.067, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
NAPVFS+ ++ + E P+ T VI L A+D D G N +++ + GD +F I+
Sbjct: 2258 NAPVFSNLMHNVNIAEGLPVDTSVIELSASDKD-SGRNKDLTFQMVKTHGDESDFFEINP 2316
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ L IV ++LD E + +NL ++A D GT P
Sbjct: 2317 QTGL--------------------IVTKQVLDYE-SRKHFNLKIKATDNGTIP 2348
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 9/70 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN-- 59
N P FS Y+ TV +N + T V + A D D G+NS++ YS+ GD GYF++D
Sbjct: 3106 NPPRFSSSHYEVTVFDNTTVRTPVAVVYAKDPD-TGINSEVKYSLLSGDD-GYFSLDEFS 3163
Query: 60 -----EGPLN 64
E PLN
Sbjct: 3164 GILRLERPLN 3173
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F Y+ V P GT V+ +KA D D G N+ ISYS+ G+ FTID
Sbjct: 1541 HSPAFLSPRYEVGVSNLAPAGTEVLRVKALDKD-MGSNAHISYSLHSGNIDNVFTIDP-- 1597
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
D G+ I V K LD + L ++LT++A D+G P R
Sbjct: 1598 ------------DLGS------ISVSKPLDLQPQDL-FHLTVKATDQGFPQR 1630
Score = 38.9 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 45/108 (41%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P+ VY V EN P V+ + A+D D G N +ISY++ G D + G
Sbjct: 3004 NSPLCEQLVYTEVVMENSPSSVFVLKVSASDPD-VGTNGQISYTLHGPDADKFHLEHRTG 3062
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
L L +LDRE + +NL ++A D G
Sbjct: 3063 EL---------------------FTLAVLDRE-RNVEFNLVVKATDGG 3088
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 17 ENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
EN P+ + ++ KA D D G NSK+ Y++ G+ G F+ID
Sbjct: 719 ENHPLNSTIVQFKATDNDS-GFNSKLVYAISSGNEDGCFSID 759
Score = 35.8 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 18/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F++ VY+ +V EN ++ + DAD N I+ + GD LG F I
Sbjct: 2898 NPPKFTEEVYRGSVVENSTPYEPIVYMTTTDADVSLENRLITCYITAGDPLGQFAI---- 2953
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
++D G ++ ++V + LDRE A Y L + A D
Sbjct: 2954 ---------VQVDEG----QWGLIVKESLDRE-ARDRYALRVTATD 2985
>gi|242000160|ref|XP_002434723.1| cadherin, putative [Ixodes scapularis]
gi|215498053|gb|EEC07547.1| cadherin, putative [Ixodes scapularis]
Length = 1123
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 44/62 (70%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++APVF D V A+V ENQP TLV TL A D D G + K++Y++ GDG+G F+ID++
Sbjct: 1056 LHAPVFPDQVANASVAENQPRDTLVTTLSAVDDDKTGNDGKLTYAIVDGDGVGVFSIDDK 1115
Query: 61 GP 62
GP
Sbjct: 1116 GP 1117
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 23/111 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y A ++E+ P+G++V ++ A D D G K++Y V G
Sbjct: 951 NTPKFTLLQYVARIREDLPLGSVVTSMSAIDPD-FGDGGKVTYKVDG------------- 996
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+H I D GT + + LD E L YN+T+RA D G PP
Sbjct: 997 --DHGDIFDVDPDMGT------VRLSAPLDFETCRL-YNVTVRATDGGEPP 1038
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 47/110 (42%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ + EN+P+G+ V T+ A D D N +SYS
Sbjct: 484 NAPAFNQSSVDILIDENKPVGSNVFTVHAVDED-EAENGYVSYS---------------- 526
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L + VP +DP + + + ++LD E Y L +RA D G P
Sbjct: 527 -LVNLNKVPFSVDPFSGE----VRTTEVLDFETMRKSYVLRIRATDWGVP 571
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 16/88 (18%)
Query: 28 LKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVL 87
++ D DP G++ KI GG + +D+ HF++V G + EYNI V
Sbjct: 290 VRVTDEDP-GVHGKI-----GGLAIVDGDVDD-----HFKVVS-----GAQPGEYNIEVD 333
Query: 88 KLLDREIAPLGYNLTLRAVDKGTPPRET 115
R + P GY LTLRA D+GTP + T
Sbjct: 334 PRPGRPLNPRGYTLTLRAWDQGTPSQYT 361
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 24/108 (22%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NEGPLNHFRIV 69
++ V E+ P+G+++ L+A D D G N ++ Y V GD F +D ++G L+
Sbjct: 751 HEVAVNESLPVGSVLAYLEAKDLD-HGYNGRLVYVVSNGDEDSCFRMDMHQGSLH----- 804
Query: 70 PTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ LDRE+ P Y L + A D G P + K
Sbjct: 805 ----------------LSAPLDREVTP-SYVLNITAYDLGQPSKSESK 835
>gi|158284496|ref|XP_307203.4| AGAP011529-PA [Anopheles gambiae str. PEST]
gi|157020990|gb|EAA03233.5| AGAP011529-PA [Anopheles gambiae str. PEST]
Length = 652
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 41/59 (69%), Gaps = 5/59 (8%)
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
P HFRI PT PG EY I V +LLDRE AP GYNLTLRAVD+G PP+++Y TP
Sbjct: 150 PDGHFRIKPTD-RPG----EYVIEVHRLLDRETAPAGYNLTLRAVDRGVPPKQSYLVTP 203
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ +Y+ +V E P T VI LK D D G N+K+ + GG+ G F ++ E
Sbjct: 212 NAPVFNREIYEVSVPETSPPNTPVIRLKVTDRD-EGKNAKVFLEIVGGNEGGEFRVNPET 270
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ + VP LD E+ Y LT+ A+D+G P
Sbjct: 271 GM-LYTAVP-------------------LDAELKAF-YTLTVSAIDQGNP 299
Score = 42.7 bits (99), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 23/111 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNE 60
NAP F+ ++E+ P GT+V + A D D G +S+I YS GDG G F ID
Sbjct: 537 NAPEFAVQDLTVRIREDVPRGTVVTVVSAIDLDS-GTSSEIVYSFGENGDGEGSFRID-- 593
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K+ I ++LD E + ++L ++A+D+GTP
Sbjct: 594 ------------------KQSGTIRTARMLDFEERQV-HSLIVKAIDRGTP 625
>gi|410917722|ref|XP_003972335.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1-like [Takifugu
rubripes]
Length = 4583
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 58/113 (51%), Gaps = 22/113 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+F FV + +KE+ P+GT V+TL A D D G + ++ YS+R G GLG FTID E +
Sbjct: 1003 PLFRSFVEKGFIKEDAPVGTSVMTLTAEDED-KGRDGEVRYSIRDGSGLGIFTIDEETGV 1061
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
I +LLD E P Y LT+ A+D+G P T+
Sbjct: 1062 --------------------IRTQELLDHETTP-HYWLTVYAMDRGVVPLSTF 1093
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 55/117 (47%), Gaps = 22/117 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y+ TV EN P GT V+T+KA D D RG +G ++I N
Sbjct: 430 NAPEFQQTSYKTTVDENVPTGTSVLTVKATDHD------------RGENGYVTYSITNMS 477
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
P P ID T I +LLD E+ P YNL +RA D G+P R +A
Sbjct: 478 PQ------PFAIDYFTGV----ITTSELLDYELMPRIYNLKVRASDWGSPYRREVEA 524
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 52/112 (46%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N PVFS VY A V E+ +G V T+ A D D P +S++ YS+ G+ FTID
Sbjct: 3305 NRPVFSQDVYTAVVSEDTELGRTVATVNAEDLDGPS-HSQVRYSIVAGNQGSPFTIDAAR 3363
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G L V + LDRE GY LT+ A D GTPP
Sbjct: 3364 GELK---------------------VARQLDRERTS-GYTLTVVASDSGTPP 3393
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 17/90 (18%)
Query: 24 LVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYN 83
+++T++ D P G S S+ GD PL F+ V + PG+K EY
Sbjct: 243 VIVTVEDGDHGPNG--EIASLSIVAGD-----------PLQQFKAV--RSSPGSK--EYK 285
Query: 84 IVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I +K +D + P GYNLTL+A DKG+PP+
Sbjct: 286 IKAVKDVDWDGQPFGYNLTLQAKDKGSPPQ 315
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ GT ++ ++AA D N +ISY + G+ G F++D
Sbjct: 3200 NPPVFEHREYTATVSEDVTAGTQLLRVQAASRDTEA-NGEISYGIISGNEHGLFSVD--- 3255
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ ++ V++ LD E A Y +T+ A D G+PP
Sbjct: 3256 -----------------PRSGDVFVIEPLDYE-ASHEYYITIEATDGGSPP 3288
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 53/117 (45%), Gaps = 22/117 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y V E+ +G+ V+ + A D D G N++I+YS+ G+ F ID
Sbjct: 1531 NAPWFVGTPYSGRVFESAAVGSAVLQVTARDKD-KGHNAEIAYSLESGNFANTFAID--- 1586
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
P+ GT I V K LDR + Y LT++A D G P T A
Sbjct: 1587 PV-----------LGT------ITVAKELDRN-SKAQYELTVKASDHGASPLSTTAA 1625
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 50/116 (43%), Gaps = 23/116 (19%)
Query: 3 APVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
AP F++ F VKE+ P+G ++ L A DAD G N K+ Y + GG+ +F +D E
Sbjct: 684 APQFAEAFANVIEVKEDLPVGARIVHLSATDAD-SGFNGKLVYVISGGNTGSHFVVDMES 742
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ V LDRE A Y L + D G P + + +
Sbjct: 743 GW--------------------LQVYSPLDRE-AVDSYTLNITVYDLGIPQKSSSR 777
Score = 42.7 bits (99), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 19/93 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVIT-LKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F+ VY+ TV E+ P + VI L D D +N +++Y + GGD LG F I++
Sbjct: 2888 NPPRFTAEVYKGTVSEDDPPPSGVIAILSTTDDDSEDINKQVNYFITGGDPLGQFAIEH- 2946
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
+ E+ + V K LDRE
Sbjct: 2947 -----------------IQNEWKVFVRKPLDRE 2962
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 50/110 (45%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS Y TV EN IGT V L A+D D G+NS I YS+ G+F+ID +
Sbjct: 3096 NPPQFSSDPYTFTVFENTEIGTYVAKLLASDID-VGLNSDIVYSLLDS-ADGFFSIDEQT 3153
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ I + + LDRE+ Y L A D+G+P
Sbjct: 3154 GV--------------------ISLERPLDRELQAT-YELRALASDQGSP 3182
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y++T+ + P GT V+ + A+D D G N+ I +S+ D E
Sbjct: 2565 NAPQFRAADYKSTIASDAPRGTSVVRIAASDTD-EGSNADIEFSIEA---------DVEN 2614
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+F I PT TK+ L L+ E+ Y +RA D G PP+ +
Sbjct: 2615 VEENFEIHPTSGVIVTKES------LIGLENEL----YAFFVRAKDTGNPPKHS 2658
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 25/102 (24%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNEGPLNHFRIV 69
Y+ V+E+ PIGT+++ L+A D D G +S++ YS V GDG HF +
Sbjct: 903 YRVKVREDLPIGTVIMWLEAHDPD-IGPSSQVRYSLVDNGDG-------------HFEV- 947
Query: 70 PTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT +A DKG P
Sbjct: 948 --------DKLSGALRIVQNLDYETKQV-YNLTAKAKDKGKP 980
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P +Y +V EN P G L++ + A+DAD N+ I+Y ++G G F ID+
Sbjct: 2994 NSPRCEKALYSESVPENSPAGRLILQVSASDADIRS-NAHITYELQGA-GSELFIIDS-- 3049
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
D G K + LDRE + T+RAVD G
Sbjct: 3050 ------------DTGELKTS------QPLDRE-EQEEHRFTMRAVDGG 3078
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 24/108 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F Y + E P+GT +I + ++D D G N + YS+ GG
Sbjct: 789 NSPQFLQDSYSVQISEGTPVGTEIIQVDSSDKD-QGNNGVVLYSILGG------------ 835
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+HF ID T + V K LDRE+ P+ Y L + A D+
Sbjct: 836 -TDHF-----AIDANTGV----VSVTKPLDRELHPV-YVLKIAARDQA 872
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N P F Y+A V EN P GT VI ++A+D D G N + YS+
Sbjct: 2778 NKPAFESDPYEAVVVENLPSGTQVIQVRASDQD-SGTNGHVVYSL 2821
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP S+ VY +V EN P +I + A D D + K+SY + G+ G+F I+
Sbjct: 1106 NAPQTSEPVYYPSVMENSPKDVSIIQINAIDPDTKASD-KLSYRITSGNPQGFFAIN 1161
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y ++EN+P GT V+ L D D ++++ G+ F I +G
Sbjct: 3410 NPPLFSQANYSLIIQENRPKGTSVLQLAVTDRDASHNGPPFTFAIVDGNEGDAFHISEQG 3469
Query: 62 PL 63
L
Sbjct: 3470 AL 3471
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ Y + EN P+GTLV KA D D G+ +I+Y + F+++ G +
Sbjct: 2463 PTFTQTEYVVELVENSPVGTLVAEAKATDGD-EGVYGQITYQIVNDFAKDKFSVNENGEI 2521
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP F+ Y +T+ E P G + ++A+DAD + + + G + L F+ID
Sbjct: 2359 NAPEFTQNTYNSTISELAPRGHFITQVQASDADSSDKDKLLFFFTSGNEDLN-FSID 2414
>gi|344257115|gb|EGW13219.1| Protocadherin Fat 4 [Cricetulus griseus]
Length = 5152
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y ++ EN P+G+ V+ DAD G+NS++SYS+ GD LG F +D G
Sbjct: 2111 NPPVFSMSSYSTSLMENLPVGSTVLVFNVTDADD-GVNSQLSYSIASGDSLGQFAVDKHG 2169
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L LK LDRE YNL ++ D PP + +T +
Sbjct: 2170 VLK---------------------TLKALDRESQSF-YNLVIQVHDSPQPPASRFTSTAQ 2207
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS VY+ +KEN GT +I + A D+D G N ++ Y + GG+ F ID+
Sbjct: 2321 NNPVFSQAVYRVQIKENTLTGTDIIQVSATDSD-EGTNGQVRYGIVGGNTHQEFRIDSVT 2379
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I V K LDRE P Y LT++A D+G+ PR
Sbjct: 2380 GA--------------------ITVAKTLDRETTP-AYTLTVQATDRGSSPR 2410
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS Y+ + E PIGT V + A D+D S+ SY + G+ G F+
Sbjct: 3575 PVFSLNTYRVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGAFS------- 3627
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I V LDRE P+ YNLT+ AVD GTP
Sbjct: 3628 ---------INPQTGQ----ITVTSGLDRESLPV-YNLTVLAVDSGTP 3661
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ VY+ + E P G+ V + A D D G+N+ + YS+ G+GLG+F I
Sbjct: 644 PVFAQQVYRVNLSEEVPPGSYVSGVSATDGDS-GLNANLRYSIVSGNGLGWFHIS----- 697
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T G LDRE+A L + A D+G P+ +Y
Sbjct: 698 EHSGLVTTSAAGG-------------LDRELAS-QIVLNISARDQGVHPKVSY 736
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD P N IS + GG NE HF + +K
Sbjct: 536 ASVDENAQVGTVVALLTVTDADSPAANGNISVQILGG---------NEQ--RHFEVQRSK 584
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD-KGTPPRETYKA 118
+ P I V LDRE P YNLT+ D G PP +A
Sbjct: 585 V-PNLSL----IKVASALDRERIP-SYNLTVSVSDNSGAPPTAEVQA 625
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N+ I Y ++ +EG
Sbjct: 417 NPPVFGSSHYQAGVPEDAVVGSSVLQVAAADAD-EGTNADIRYRLQ-----------DEG 464
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P ++DP T I V + LD E A Y+LT++A D+G P
Sbjct: 465 -------TPFQMDPETGL----ITVREPLDFE-ARRQYSLTVQATDRGVP 502
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G+N+ + Y++ G + G F+
Sbjct: 1482 NTPSFPKSTLFVDVLENMRIGELVSSVTATDSD-SGVNADLHYTITGSNNHGTFS----- 1535
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1536 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1573
Score = 42.7 bits (99), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y+ T+ E++P+ + ++A+D D G N +I+Y++ G+ F I +G
Sbjct: 1163 NPPVFDQISYEVTLSESEPVNSRFFKVQASDKD-SGANGEIAYTITDGNTGDAFGIFPDG 1221
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D +++ +VV DR + PL + + +
Sbjct: 1222 QL----YIKSELDRELQERYVLLVVAS--DRAVEPLSATVNVTVI 1260
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF + TV EN P GT VI L A DAD G N+ I+Y+V+ D F ID
Sbjct: 3363 NSPVFVPDEFFPTVMENAPSGTTVIHLNATDAD-SGTNAVIAYTVQSSDS-DLFVID 3417
Score = 41.6 bits (96), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G VI A D+D G++ + SY + G+ G F +D
Sbjct: 302 NAPVFPDPSIVVTFKEDSGSGRQVILDTATDSDIGSNGVDHR-SYRIVRGNEAGRFRLD- 359
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P R Y
Sbjct: 360 -----------ITLNPSGEGAFLHLVSKGGLDREVTP-QYQLLVEVEDKGEPKRRGY 404
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A ++EN+P G+ V T+ A D D G N + YS+ GD
Sbjct: 856 NSPVFYPVQYFAHIQENEPGGSYVTTVSATDPD-MGPNGTVQYSISAGD 903
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 46/108 (42%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQATV E T V+ + A+D D G N I YS+ G+ F ID
Sbjct: 1377 NAPKFLKDFYQATVSETATNLTQVLRVSASDMD-EGSNGLIHYSILKGNEERQFAID--- 1432
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ + ++ LD E P Y+L ++AVD G
Sbjct: 1433 -----------------RFSGQVTLIGKLDYEATP-AYSLLIQAVDSG 1462
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F Y V +N +GT +I + A D G+NS++ Y + G+ L F +DN+
Sbjct: 3152 NPPQFIKNKYFTPVTKNVKVGTKLIKVTAMDDKDFGLNSEVEYFISNGNHLRKFKLDND 3210
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 21/98 (21%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKI 73
++ EN P+GT VI++ A D D +N ++SY++ I NHF I K
Sbjct: 1599 SIMENVPLGTSVISVTAHDPD-ADINGQLSYAI----------IQQMPRGNHFSIDEVK- 1646
Query: 74 DPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
GT I +DRE A L + LT++A D+ P
Sbjct: 1647 --GT------IYTSAEIDREFANL-FELTVKANDQAVP 1675
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVFS Y V EN +G V ++ A D +N+ ISY + GD G F ++
Sbjct: 960 NPPVFSQAAYSFVVFENVALGYHVGSVSATTMD---LNANISYLITTGDQRGMFAMN 1013
>gi|354495052|ref|XP_003509646.1| PREDICTED: protocadherin Fat 4 [Cricetulus griseus]
Length = 4981
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y ++ EN P+G+ V+ DAD G+NS++SYS+ GD LG F +D G
Sbjct: 1940 NPPVFSMSSYSTSLMENLPVGSTVLVFNVTDADD-GVNSQLSYSIASGDSLGQFAVDKHG 1998
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L LK LDRE YNL ++ D PP + +T +
Sbjct: 1999 VLK---------------------TLKALDRESQSF-YNLVIQVHDSPQPPASRFTSTAQ 2036
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS VY+ +KEN GT +I + A D+D G N ++ Y + GG+ F ID+
Sbjct: 2150 NNPVFSQAVYRVQIKENTLTGTDIIQVSATDSD-EGTNGQVRYGIVGGNTHQEFRIDSVT 2208
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I V K LDRE P Y LT++A D+G+ PR
Sbjct: 2209 GA--------------------ITVAKTLDRETTP-AYTLTVQATDRGSSPR 2239
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS Y+ + E PIGT V + A D+D S+ SY + G+ G F+
Sbjct: 3404 PVFSLNTYRVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGAFS------- 3456
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I V LDRE P+ YNLT+ AVD GTP
Sbjct: 3457 ---------INPQTGQ----ITVTSGLDRESLPV-YNLTVLAVDSGTP 3490
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ VY+ + E P G+ V + A D D G+N+ + YS+ G+GLG+F I
Sbjct: 473 PVFAQQVYRVNLSEEVPPGSYVSGVSATDGDS-GLNANLRYSIVSGNGLGWFHIS----- 526
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T G LDRE+A L + A D+G P+ +Y
Sbjct: 527 EHSGLVTTSAAGG-------------LDRELAS-QIVLNISARDQGVHPKVSY 565
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD P N IS + GG NE HF + +K
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSPAANGNISVQILGG---------NEQ--RHFEVQRSK 413
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD-KGTPPRETYKA 118
+ P I V LDRE P YNLT+ D G PP +A
Sbjct: 414 V-PNLSL----IKVASALDRERIP-SYNLTVSVSDNSGAPPTAEVQA 454
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N+ I Y ++ +EG
Sbjct: 246 NPPVFGSSHYQAGVPEDAVVGSSVLQVAAADAD-EGTNADIRYRLQ-----------DEG 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P ++DP T I V + LD E A Y+LT++A D+G P
Sbjct: 294 -------TPFQMDPETGL----ITVREPLDFE-ARRQYSLTVQATDRGVP 331
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G+N+ + Y++ G + G F+
Sbjct: 1311 NTPSFPKSTLFVDVLENMRIGELVSSVTATDSD-SGVNADLHYTITGSNNHGTFS----- 1364
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1365 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1402
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y+ T+ E++P+ + ++A+D D G N +I+Y++ G+ F I +G
Sbjct: 992 NPPVFDQISYEVTLSESEPVNSRFFKVQASDKD-SGANGEIAYTITDGNTGDAFGIFPDG 1050
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D +++ +VV DR + PL + + +
Sbjct: 1051 QL----YIKSELDRELQERYVLLVVAS--DRAVEPLSATVNVTVI 1089
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF + TV EN P GT VI L A DAD G N+ I+Y+V+ D F ID
Sbjct: 3192 NSPVFVPDEFFPTVMENAPSGTTVIHLNATDAD-SGTNAVIAYTVQSSDS-DLFVID 3246
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G VI A D+D G++ + SY + G+ G F +D
Sbjct: 131 NAPVFPDPSIVVTFKEDSGSGRQVILDTATDSDIGSNGVDHR-SYRIVRGNEAGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P R Y
Sbjct: 189 -----------ITLNPSGEGAFLHLVSKGGLDREVTP-QYQLLVEVEDKGEPKRRGY 233
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A ++EN+P G+ V T+ A D D G N + YS+ GD
Sbjct: 685 NSPVFYPVQYFAHIQENEPGGSYVTTVSATDPD-MGPNGTVQYSISAGD 732
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 46/108 (42%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQATV E T V+ + A+D D G N I YS+ G+ F ID
Sbjct: 1206 NAPKFLKDFYQATVSETATNLTQVLRVSASDMD-EGSNGLIHYSILKGNEERQFAID--- 1261
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ + ++ LD E P Y+L ++AVD G
Sbjct: 1262 -----------------RFSGQVTLIGKLDYEATP-AYSLLIQAVDSG 1291
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F Y V +N +GT +I + A D G+NS++ Y + G+ L F +DN+
Sbjct: 2981 NPPQFIKNKYFTPVTKNVKVGTKLIKVTAMDDKDFGLNSEVEYFISNGNHLRKFKLDND 3039
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 21/98 (21%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKI 73
++ EN P+GT VI++ A D D +N ++SY++ I NHF I K
Sbjct: 1428 SIMENVPLGTSVISVTAHDPD-ADINGQLSYAI----------IQQMPRGNHFSIDEVK- 1475
Query: 74 DPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
GT I +DRE A L + LT++A D+ P
Sbjct: 1476 --GT------IYTSAEIDREFANL-FELTVKANDQAVP 1504
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVFS Y V EN +G V ++ A D +N+ ISY + GD G F ++
Sbjct: 789 NPPVFSQAAYSFVVFENVALGYHVGSVSATTMD---LNANISYLITTGDQRGMFAMN 842
>gi|301604928|ref|XP_002932104.1| PREDICTED: protocadherin Fat 4 [Xenopus (Silurana) tropicalis]
Length = 3255
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 58/118 (49%), Gaps = 23/118 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A+V EN P G+ ++T DAD G NSK+SY++ GD +G F + +G
Sbjct: 221 NPPVFSRNSYSASVMENLPPGSTILTFNVTDAD-DGFNSKLSYTISSGDSMGQFQVSKDG 279
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
L+ VL+LLDRE Y+L ++ D PP Y ++
Sbjct: 280 TLS---------------------VLQLLDRETQSF-YSLVVQVHDMAPPPAPRYTSS 315
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 50/108 (46%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS VY + E GT V + A D+D S+ SY + G+ G F
Sbjct: 1682 PVFSLKVYNVQISEGVTPGTHVTFVSAFDSDSVPSWSRFSYFIGSGNDKGAFA------- 1734
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + + V LDRE+ PL YNLT+ A+D G+P
Sbjct: 1735 ---------INPQTGQ----VTVTTELDREMTPL-YNLTVLAIDSGSP 1768
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P FS ++ + E+ GT +I L A+DAD G+N + Y++ G+
Sbjct: 431 NSPHFSQRHFKVEISESTLTGTDLIQLIASDAD-EGINGMVRYAIIDGN----------- 478
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P N FR ID T + + + LDRE Y L ++A D+G+ PR
Sbjct: 479 PSNEFR-----IDSVTGV----LSIARPLDRERKS-SYTLKIQASDRGSSPR 520
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP FS Y V +N IGT +I + A D G+NS++ YS+ + G F ID E
Sbjct: 1259 NAPKFSSTKYFTPVSKNAKIGTKLIKVTAVDDKDFGLNSEVGYSLSTENIHGKFQIDKE 1317
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 24/116 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
+ P FS TV E+ +GT++ T+ A D D MN I+Y++ G+ G F I+ +
Sbjct: 1365 HTPEFSQSHVSVTVLESLSVGTVIRTISARDRD-ASMNGIIAYNISSGNEAGLFAINAST 1423
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
G L+ +LK LD E+ ++LT+ AVD G + Y
Sbjct: 1424 GALS---------------------LLKNLDYELCQ-KHDLTISAVDGGWVAKTGY 1457
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 22/108 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y +V EN +I A D G+NS+++YS+ G+ G FT+ + G L
Sbjct: 538 PKFELSPYTVSVPENLETLPKIILQVVARDDDQGLNSRLTYSLASGNEDGAFTLSSSGQL 597
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ ++K LDRE+ Y+L + A D G P
Sbjct: 598 S---------------------LIKSLDREVKEW-YSLLITATDAGFP 623
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 22/141 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID--- 58
N P+F Y +V EN P GT VI L A D D N+ I+YSV+ D F ID
Sbjct: 1470 NPPIFKADEYFPSVMENAPSGTTVIRLNATDVD-SAPNAVIAYSVQSSDS-DLFVIDPNT 1527
Query: 59 ----NEGPLN-----HFRIVPTKID-PGTKKKEYNIVVLKL------LDREIAPLGYNLT 102
+G L+ H+ + + P ++ + V ++L + R ++ L Y
Sbjct: 1528 GIITTQGFLDYETKQHYHLTVKAFNVPDEERCSFVTVTVQLEGANEYVPRFVSKLYYFEV 1587
Query: 103 LRAVDKGTPPRETYKATPRNG 123
A KGT E + A+ R+G
Sbjct: 1588 SEAAPKGTVVGEVF-ASDRDG 1607
>gi|444705648|gb|ELW47051.1| Protocadherin Fat 1 [Tupaia chinensis]
Length = 4584
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 59/116 (50%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVFS FV + VKE+ PIG+ V+T+ A D D PG + +I YS+R G G+G F ID E
Sbjct: 1025 LHPPVFSSFVEKGIVKEDVPIGSSVMTVSAHDED-PGRDGEIRYSIRDGSGVGVFRIDEE 1083
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE P Y LT+ A D+G P ++
Sbjct: 1084 TGV--------------------IETSDRLDRESTP-HYWLTVYATDQGVVPLSSF 1118
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 54/112 (48%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS + V E+ + VIT+ A DAD P NS I YS+ G+ FTID
Sbjct: 3329 NTPVFSQDTF--VVSEDAVLEQSVITVMADDADGPS-NSHIHYSITDGNQGSPFTID--- 3382
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P K + + V KLLDRE GY LT++A D G PPR
Sbjct: 3383 --------PVKGE---------VKVTKLLDRETIS-GYTLTVQASDNGNPPR 3416
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 57/114 (50%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS Y TV EN GTL+ ++A DAD G+N KISYS+ G F+I+
Sbjct: 3115 NAPEFSADPYTITVFENTEPGTLLTRVQATDAD-AGLNRKISYSLINS-AEGQFSINELS 3172
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I + K LDRE+ + Y LTL+AVD+G P R T
Sbjct: 3173 GI--------------------IQLEKPLDRELQAV-YTLTLKAVDQGLPRRLT 3205
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N +++Y + GGD LG F I+N
Sbjct: 2910 PRFTAEIYKGTVSEDDPPGGVIAILSTTDADSEEINRQVTYFITGGDALGQFAIEN---- 2965
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE Y L++ A D
Sbjct: 2966 --------------VQNEWKVYVKKPLDREKRD-NYLLSITATD 2994
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 52/112 (46%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A+ EN PIGT V+++ A D D G N ++YS+
Sbjct: 455 NPPEFTQTAYKASFDENVPIGTTVMSVSAVDPD-EGENGYVTYSI--------------A 499
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
LNH VP ID T + + LD E+ P Y L +RA D G P R
Sbjct: 500 NLNH---VPFVIDHFTGA----VSTSENLDYELMPRVYTLRIRASDWGLPYR 544
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 18/110 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ IGT V+ + AA D N+ I+YS+ G+ G F+ID++
Sbjct: 3220 NPPVFEYREYGATVSEDILIGTEVLQVYAASRDIEA-NADITYSIISGNEHGKFSIDSK- 3277
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
T +I +++ LD E + Y LT+ A D GTP
Sbjct: 3278 ---------------TGNLRGSIFIIESLDYE-SSHEYYLTVEATDGGTP 3311
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ +G++V+ + A D D G N+++ YS+ G+ FTID
Sbjct: 1552 HAPWFTSSSYEGRVYESSAVGSVVLQVTALDKD-KGQNAEVLYSIESGNIGNSFTID--- 1607
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+ +I K LDR + Y+L ++A DKG PP
Sbjct: 1608 PILG-----------------SIKTAKELDRS-NQVEYDLMVKATDKGNPP 1640
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P+F +Y+A + E+ P G V +KA DAD ++ K+ YS+ G+ F ID+E
Sbjct: 2380 NPPLFDQQIYEARISEHAPHGHFVTCVKACDADSSDVD-KLEYSILSGNDHKNFVIDSE 2437
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 51/113 (45%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLG--YFTIDN 59
NAPVF Y AT+ E IGT VI ++A D+D N ISY + G YF ID+
Sbjct: 2273 NAPVFVQQSYAATLSEASVIGTSVIQVRATDSDSEP-NRGISYQMFGNHSKSQDYFHIDS 2331
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L I +++ LD E + +++RAVD G PP
Sbjct: 2332 STGL--------------------ISLVRTLDYEQFQ-QHRISVRAVDGGMPP 2363
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 44/103 (42%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKEN P+G+ +I + A D D G N K+ YS+ GG+ F ID E +
Sbjct: 722 VKENHPVGSDIIFMNATDLD-TGFNGKLVYSISGGNEDSCFVIDMETGM----------- 769
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ +L LDRE Y L + D G P + +
Sbjct: 770 ---------LKILSPLDRETTD-KYTLNVTVYDLGVPQKAAWH 802
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F Y+ V+E+ P GT+++ L+A D D G +S++ YS+ G G F +D
Sbjct: 919 NPPMFIPPNYRVKVREDLPEGTIIMWLEAYDPD-LGQSSQVRYSLM-DHGEGNFDVD--- 973
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I +++ LD E + YNLT+RA DKG P
Sbjct: 974 -----------------KLSGAIRIVQQLDFEKKQV-YNLTVRAKDKGKP 1005
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 19/90 (21%)
Query: 25 VITLKAADADPPGMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYN 83
++T+ D G N +I S S+ GD L F + PG+K EY
Sbjct: 271 IVTVDDCDQ---GANGEIASLSIVAGDDLQQFRT-------------ARSFPGSK--EYK 312
Query: 84 IVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ + +D + P GYNLTL+A DKG PP+
Sbjct: 313 VKAMGGIDWDSHPFGYNLTLQAKDKGNPPQ 342
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y ++EN+P+G V+ L D D +++ G+ F I+ +G
Sbjct: 3432 NAPVFSQGNYSVIIQENKPVGFSVLQLVVTDKDSSHNGPPFFFTIVSGNEDRSFEINQQG 3491
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLT---LRAVDKGTPP 112
L + K+ K++ + +K+ D PL +LT +R +++ P
Sbjct: 3492 VLLTSAAIKQKV------KDHYFLHVKVADNGKPPLS-SLTYIDIRVIEESIHP 3538
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV +Y T+ E+ P G L++ + A DAD N++I+Y++ G +
Sbjct: 3013 NSPVCEKTLYADTIPEDAPPGKLIMQVSATDADIRS-NAEITYTLYGSGAEKF------- 3064
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
K++P T + + L LDRE + YNL ++A D G
Sbjct: 3065 ----------KLNPDTGE----LKTLAPLDREEQAI-YNLVVKATDGG 3097
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 21/114 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S+ VY V EN P V+ ++A D D + K+ Y + G+ G+F+I +
Sbjct: 1131 NAPQTSEPVYYPEVMENSPKDVSVVQIEAFDPDSSS-DDKLMYKITSGNPQGFFSIHPK- 1188
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
T + T +K LDRE + L + D G+PPR T
Sbjct: 1189 ---------TGLITTTSRK---------LDREQQD-EHILEVTVTDNGSPPRST 1223
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
+++PVF Y+ + EN P+ TLVI +KA D D G+ +++Y +
Sbjct: 2481 LHSPVFLQNEYEVELAENAPLHTLVIEVKATDGD-SGIYGRLTYRI 2525
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 16/128 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTID 58
N+P+ Y+A + EN P G+ VI ++A+D D G N ++ YS+ + D + F I+
Sbjct: 2799 NSPLLESNPYEAFIVENLPAGSRVIQIRASDLD-SGTNGQVMYSLDQSQSVDVIESFAIN 2857
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTPPR- 113
E I K K+ Y I V+ E L ++T+ V+ +PPR
Sbjct: 2858 METGW----ITTLKELDHEKRDSYQIKVVASDHGEKVQLSSTAIVDVTVTDVND-SPPRF 2912
Query: 114 --ETYKAT 119
E YK T
Sbjct: 2913 TAEIYKGT 2920
>gi|153792706|ref|NP_899044.3| protocadherin Fat 4 precursor [Mus musculus]
gi|341940688|sp|Q2PZL6.2|FAT4_MOUSE RecName: Full=Protocadherin Fat 4; AltName: Full=FAT tumor suppressor
homolog 4; AltName: Full=Fat-like cadherin protein FAT-J;
Flags: Precursor
Length = 4981
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y ++ EN P+G+ V+ DAD G+NS++SYS+ GD LG F +D G
Sbjct: 1940 NPPVFSMSSYSTSLMENLPLGSTVLVFNVTDADD-GVNSQLSYSIASGDSLGQFAVDKHG 1998
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L LK LDRE YNL ++ D PP + +T +
Sbjct: 1999 VLK---------------------TLKALDRESQSF-YNLVIQVHDLPQPPTSRFTSTAQ 2036
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y+ +KEN GT +I + AAD D G N ++ Y + GG+ F ID+
Sbjct: 2150 NNPVFAQAMYRVQIKENILTGTDIIQVSAADND-EGTNGQVRYGIVGGNTHQEFRIDSVT 2208
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I V K LDRE P Y LT++A D+G+ PR
Sbjct: 2209 GA--------------------ITVAKSLDRETTP-AYTLTVQATDRGSSPR 2239
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS Y+ + E PIGT V + A D+D S+ SY + G+ G F+
Sbjct: 3404 PVFSLSTYRVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGAFS------- 3456
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I V LDRE P+ YNLT+ AVD GTP
Sbjct: 3457 ---------INPQTGQ----ITVTSGLDRESLPV-YNLTVLAVDSGTP 3490
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF VY+ + E P G+ V + A D D G+N+ + YS+ G+GLG+F I
Sbjct: 473 PVFEQQVYRVNLSEEVPPGSYVSGVSATDGDS-GLNANLRYSIVSGNGLGWFHIS----- 526
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T G LDRE+A L + A D+G P+ +Y
Sbjct: 527 EHSGLVTTSAAGG-------------LDRELAS-QIVLNISARDQGVHPKVSY 565
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD P N IS + GG NE HF + +K
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSPAANGNISVQILGG---------NEQ--RHFEVQRSK 413
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD-KGTPPRETYKA 118
+ P I V LDRE P YNLT+ D G PP +A
Sbjct: 414 V-PNLSL----IKVASALDRERIP-SYNLTVSVSDNSGAPPTAEVQA 454
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N+ I Y ++ +EG
Sbjct: 246 NPPVFGSSHYQAGVPEDAVVGSSVLQVAAADAD-EGTNADIRYRLQ-----------DEG 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P ++DP T I V + LD E A Y+LT++A D+G P
Sbjct: 294 -------TPFQMDPETGL----ITVREPLDFE-ARRQYSLTVQATDRGVP 331
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G+N+ + Y++ G + G F+
Sbjct: 1311 NTPSFPKSTLFVDVLENMRIGELVSSVTATDSD-SGVNADLHYTITGSNNHGTFS----- 1364
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1365 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1402
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF + TV EN P GT VI L A DAD G N+ I+Y+V+ D F ID
Sbjct: 3192 NSPVFVPDEFFPTVMENAPSGTTVIHLNATDAD-SGANAVIAYTVQSSDS-DLFVID 3246
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y+ T+ E++P+ + ++A+D D G N +I+Y++ G+ F I +G
Sbjct: 992 NPPVFDQISYEVTLSESEPVNSRFFKVQASDKD-SGANGEIAYTITDGNNGDAFGIFPDG 1050
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPL 97
L + +++D + + +VV DR + PL
Sbjct: 1051 QL----YIKSELDRELQDRYVLLVVAS--DRAVEPL 1080
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 51/117 (43%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G VI A D+D G++ SY + G+ G F +D
Sbjct: 131 NAPVFPDPSIVVTFKEDSGSGRQVILDTATDSDIGSNGVDHH-SYRIVSGNEAGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P R Y
Sbjct: 189 -----------ITLNPSGEGAFLHLVSKGGLDREVTP-QYQLLVEVEDKGEPKRRGY 233
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F Y V +N +GT +I + A D G+NS++ Y V G+ LG F +DN+
Sbjct: 2981 NPPQFLQNKYFTPVTKNVKVGTKLIKVTAVDDKDFGLNSEVEYFVSDGNHLGKFKLDND 3039
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS AT+ E+ IG++V T+ A D D MN ISY++ G+ G F I++
Sbjct: 3087 HTPEFSQNHISATIPESHSIGSVVRTVSARDRD-TAMNGLISYNIISGNEEGIFAINSST 3145
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ + + K LD E++ + +T+ A D G R Y
Sbjct: 3146 GV--------------------VTLAKALDYEMSS-KHEMTISATDGGWVARTGY 3179
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A ++EN+P G+ V T+ A D D G N + YS+ GD
Sbjct: 685 NSPVFYPVQYFAHIQENEPGGSYVTTVSATDPD-MGPNGTVKYSISAGD 732
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 47/111 (42%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQATV E T V+ + A+D D G N I YS+ G+ F ID+
Sbjct: 1206 NAPKFLKDFYQATVSETATNLTQVLRVSASDVD-EGSNGLIHYSILKGNEERQFAIDSFS 1264
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ ++ LD E A Y+L ++AVD G P
Sbjct: 1265 G--------------------QVTLVGKLDYE-ATSAYSLLIQAVDSGAIP 1294
Score = 35.0 bits (79), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
+ P FS VY + E+ G+LV + A D D G+N +ISY V DG G F ++
Sbjct: 1837 HTPRFSRPVYSFDIPEDTTPGSLVAAILATD-DDSGVNGEISYVVEEDDGDGVFFLN 1892
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVFS Y V EN +G V ++ A D +N+ ISY + GD G F ++
Sbjct: 789 NPPVFSQAAYSFVVFENVALGYHVGSVSATTMD---LNANISYLITTGDQRGMFAMN 842
>gi|82659759|gb|ABB88946.1| Fat4 [Mus musculus]
Length = 4981
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y ++ EN P+G+ V+ DAD G+NS++SYS+ GD LG F +D G
Sbjct: 1940 NPPVFSMSSYSTSLMENLPLGSTVLVFNVTDADD-GVNSQLSYSIASGDSLGQFAVDKHG 1998
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L LK LDRE YNL ++ D PP + +T +
Sbjct: 1999 VLK---------------------TLKALDRESQSF-YNLVIQVHDLPQPPTSRFTSTAQ 2036
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y+ +KEN GT +I + AAD D G N ++ Y + GG+ F ID+
Sbjct: 2150 NNPVFAQAMYRVQIKENILTGTDIIQVSAADND-EGTNGQVRYGIVGGNTHQEFRIDSVT 2208
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I V K LDRE P Y LT++A D+G+ PR
Sbjct: 2209 GA--------------------ITVAKSLDRETTP-AYTLTVQATDRGSSPR 2239
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS Y+ + E PIGT V + A D+D S+ SY + G+ G F+
Sbjct: 3404 PVFSLSTYRVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGAFS------- 3456
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I V LDRE P+ YNLT+ AVD GTP
Sbjct: 3457 ---------INPQTGQ----ITVTSGLDRESLPV-YNLTVLAVDSGTP 3490
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF VY+ + E P G+ V + A D D G+N+ + YS+ G+GLG+F I
Sbjct: 473 PVFEQQVYRVNLSEEVPPGSYVSGVSATDGDS-GLNANLRYSIVSGNGLGWFHIS----- 526
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T G LDRE+A L + A D+G P+ +Y
Sbjct: 527 EHSGLVTTSAAGG-------------LDRELAS-QIVLNISARDQGVHPKVSY 565
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 47/107 (43%), Gaps = 18/107 (16%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD P N IS + GG+ HF + +K
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSPAANGNISVQILGGN-----------EQRHFEVQRSK 413
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD-KGTPPRETYKA 118
+ P I V LDRE P YNLT+ D G PP +A
Sbjct: 414 V-PNLSL----IKVASALDRERIP-SYNLTVSVSDNSGAPPTAEVQA 454
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N+ I Y ++ +EG
Sbjct: 246 NPPVFGSSHYQAGVPEDAVVGSSVLQVAAADAD-EGTNADIRYRLQ-----------DEG 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P ++DP T I V + LD E A Y+LT++A D+G P
Sbjct: 294 -------TPFQMDPETGL----ITVREPLDFE-ARRQYSLTVQATDRGVP 331
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G+N+ + Y++ G + G F+
Sbjct: 1311 NTPSFPKSTLFVDVLENMRIGELVSSVTATDSD-SGVNADLHYTITGSNNHGTFS----- 1364
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1365 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1402
Score = 42.0 bits (97), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF + TV EN P GT VI L A DAD G N+ I+Y+V+ D F ID
Sbjct: 3192 NSPVFVPDEFFPTVMENAPSGTTVIHLNATDAD-SGANAVIAYTVQSSDS-DLFVID 3246
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y+ T+ E++P+ + ++A+D D G N +I+Y++ G+ F I +G
Sbjct: 992 NPPVFDQISYEVTLSESEPVNSRFFKVQASDKD-SGANGEIAYTITDGNNGDAFGIFPDG 1050
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPL 97
L + +++D + + +VV DR + PL
Sbjct: 1051 QL----YIKSELDRELQDRYVLLVVAS--DRAVEPL 1080
Score = 41.6 bits (96), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 51/117 (43%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G VI A D+D G++ SY + G+ G F +D
Sbjct: 131 NAPVFPDPSIVVTFKEDSGSGRQVILDTATDSDIGSNGVDHH-SYRIVSGNEAGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P R Y
Sbjct: 189 -----------ITLNPSGEGAFLHLVSKGGLDREVTP-QYQLLVEVEDKGEPKRRGY 233
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F Y V +N +GT +I + A D G+NS++ Y V G+ LG F +DN+
Sbjct: 2981 NPPQFLQNKYFTPVTKNVKVGTKLIKVTAVDDKDFGLNSEVEYFVSDGNHLGKFKLDND 3039
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS AT+ E+ IG++V T+ A D D MN ISY++ G+ G F I++
Sbjct: 3087 HTPEFSQNHISATIPESHSIGSVVRTVSARDRD-TAMNGLISYNIISGNEEGIFAINSST 3145
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ + + K LD E++ + +T+ A D G R Y
Sbjct: 3146 GV--------------------VTLAKALDYEMSS-KHEMTISATDGGWVARTGY 3179
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A ++EN+P G+ V T+ A D D G N + YS+ GD
Sbjct: 685 NSPVFYPVQYFAHIQENEPGGSYVTTVSATDPD-MGPNGTVKYSISAGD 732
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 47/111 (42%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQATV E T V+ + A+D D G N I YS+ G+ F ID+
Sbjct: 1206 NAPKFLKDFYQATVSETATNLTQVLRVSASDVD-EGSNGLIHYSILKGNEERQFAIDSFS 1264
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ ++ LD E A Y+L ++AVD G P
Sbjct: 1265 G--------------------QVTLVGKLDYE-ATSAYSLLIQAVDSGAIP 1294
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
+ P FS VY + E+ G+LV + A D D G+N +ISY V DG G F ++
Sbjct: 1837 HTPRFSRPVYSFDIPEDTTPGSLVAAILATD-DDSGVNGEISYVVEEDDGDGVFFLN 1892
>gi|300794761|ref|NP_001178634.1| protocadherin Fat 4 [Rattus norvegicus]
Length = 4979
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y ++ EN P+G+ V+ DAD G+NS++SYS+ GD LG F +D G
Sbjct: 1940 NPPVFSLSSYSTSLMENLPLGSTVLVFNVTDADD-GVNSQLSYSIASGDSLGQFAVDKHG 1998
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L LK LDRE YNL ++ D PP + +T +
Sbjct: 1999 VLK---------------------ALKALDRESQSF-YNLVIQVHDLPQPPASRFTSTAQ 2036
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y+ +KEN GT +I + AAD D G N ++ Y + GG+ F ID+
Sbjct: 2150 NNPVFAQAMYRVQIKENTLTGTDIIQVSAADND-EGTNGQVRYGIVGGNTHQEFRIDSVT 2208
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I V K LDRE P Y LT++A D+G+ PR
Sbjct: 2209 GA--------------------ITVAKSLDRETIP-AYILTVQATDRGSSPR 2239
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS Y+ + E PIGT V + A D+D S+ SY + G+ G F+
Sbjct: 3402 PVFSLNTYRVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGAFS------- 3454
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I V LDRE P+ YNLT+ AVD GTP
Sbjct: 3455 ---------INPQTGQ----ITVTSGLDRESLPV-YNLTVLAVDSGTP 3488
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF VY+ + E P G+ V + A D D G+N+ + YS+ G+GLG+F I
Sbjct: 473 PVFEQQVYRVNLSEEVPPGSYVSGVSATDGDS-GLNANLRYSIVSGNGLGWFHIS----- 526
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T G LDRE+A L + A D+G P+ +Y
Sbjct: 527 EHSGLVTTSAAGG-------------LDRELAS-QIVLNISARDQGVHPKVSY 565
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD P N IS + GG NE HF + +K
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSPAANGNISVQILGG---------NEQ--RHFEVQRSK 413
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD-KGTPPRETYKA 118
+ P I V LDRE P YNLT+ D G PP +A
Sbjct: 414 V-PNLSL----IKVASALDRERIP-SYNLTVSVSDNSGAPPTAEVQA 454
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N+ I Y ++ +EG
Sbjct: 246 NPPVFGSSHYQAGVPEDAVVGSSVLQVAAADAD-EGTNADIRYRLQ-----------DEG 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P ++DP T I V + LD E A Y+LT++A D+G P
Sbjct: 294 -------TPFQMDPETGL----ITVREPLDFE-ARRQYSLTVQATDRGVP 331
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G+N+ + Y++ G + G F+
Sbjct: 1311 NTPSFPKSTLFVDVLENMRIGELVSSVTATDSD-SGVNADLHYTITGSNNHGTFS----- 1364
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1365 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1402
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQATV E T V+ + A+D D G N I YS+ G+ F+ID
Sbjct: 1206 NAPKFLKDFYQATVSETATNLTQVLRVSASDVD-EGNNGLIHYSILKGNEERQFSID--- 1261
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ + ++ LD E P Y+L ++AVD GT P
Sbjct: 1262 -----------------RFSGQVTLVGKLDYEATP-AYSLLIQAVDSGTVP 1294
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF + TV EN P GT VI L A DAD G N+ I+Y+V+ D F ID
Sbjct: 3190 NSPVFVPDEFFPTVMENAPSGTTVIHLNATDAD-SGANAVIAYTVQSSDS-DLFVID 3244
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G VI A D+D G++ + SY + G+ G F +D
Sbjct: 131 NAPVFPDPSIVVTFKEDSGSGRQVILDTATDSDIGSNGVDHR-SYRIVRGNEAGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P R Y
Sbjct: 189 -----------ITLNPSGEGAFLHLVSKGGLDREVTP-QYQLLVEVEDKGEPKRRGY 233
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y+ T+ E++P+ + ++A D D G N +I+Y++ G+ F I +G
Sbjct: 992 NPPVFDQISYEVTLSESEPVNSRFFKVQALDKD-SGANGEIAYAITDGNSGEAFGIFPDG 1050
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D + + +VV DR + PL + + +
Sbjct: 1051 QL----YIKSELDRELQDRYVLLVVAS--DRAVEPLSATVNVTVI 1089
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS AT+ E+ IG++V T+ A D D MN ISY++ G+ G F I++
Sbjct: 3085 HTPEFSQSHISATIPESHSIGSVVRTVSARDRD-TAMNGLISYNISSGNEEGIFAINSST 3143
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ + + K LD E++ + +T+ A D G R Y
Sbjct: 3144 GV--------------------VTLAKALDYELSS-KHEMTISATDGGWVARTGY 3177
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F Y V +N +GT +I + A D G+NS++ Y V G+ LG F +DN+
Sbjct: 2979 NPPQFLKNKYFTPVTKNVKVGTKLIKVTAVDDKDFGLNSEVEYFVSNGNHLGKFKLDND 3037
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A ++EN+P G+ V T+ A D D G N + YS+ GD
Sbjct: 685 NSPVFYPVQYFAHIQENEPGGSYVTTVSATDPD-MGPNGTVKYSISAGD 732
Score = 35.0 bits (79), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
+ P FS VY + E+ G+LV + A D D G+N +ISY V DG G F ++
Sbjct: 1837 HTPRFSRPVYSFDIPEDTTPGSLVAAILATD-DDSGVNGEISYVVEEDDGDGVFFLN 1892
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 21/98 (21%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKI 73
++ EN P+GT VI++ A D D +N ++SY++ I NHF I K
Sbjct: 1428 SIVENIPLGTSVISVTAHDPD-ADINGQLSYAI----------IQQMPRGNHFSIDEVK- 1475
Query: 74 DPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
GT I +DRE A L + LT++A D+ P
Sbjct: 1476 --GT------IYTSAEIDREFANL-FELTVKANDQAVP 1504
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVFS Y V EN +G V ++ A D +N+ ISY + GD G F ++
Sbjct: 789 NPPVFSQAAYSFVVFENVALGYHVGSVSATTMD---LNANISYLITTGDQRGMFAMN 842
>gi|392338710|ref|XP_001070073.3| PREDICTED: protocadherin Fat 4 [Rattus norvegicus]
Length = 4981
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y ++ EN P+G+ V+ DAD G+NS++SYS+ GD LG F +D G
Sbjct: 1940 NPPVFSLSSYSTSLMENLPLGSTVLVFNVTDADD-GVNSQLSYSIASGDSLGQFAVDKHG 1998
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L LK LDRE YNL ++ D PP + +T +
Sbjct: 1999 VLK---------------------ALKALDRESQSF-YNLVIQVHDLPQPPASRFTSTAQ 2036
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y+ +KEN GT +I + AAD D G N ++ Y + GG+ F ID+
Sbjct: 2150 NNPVFAQAMYRVQIKENTLTGTDIIQVSAADND-EGTNGQVRYGIVGGNTHQEFRIDSVT 2208
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I V K LDRE P Y LT++A D+G+ PR
Sbjct: 2209 GA--------------------ITVAKSLDRETIP-AYILTVQATDRGSSPR 2239
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS Y+ + E PIGT V + A D+D S+ SY + G+ G F+
Sbjct: 3404 PVFSLNTYRVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGAFS------- 3456
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I V LDRE P+ YNLT+ AVD GTP
Sbjct: 3457 ---------INPQTGQ----ITVTSGLDRESLPV-YNLTVLAVDSGTP 3490
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF VY+ + E P G+ V + A D D G+N+ + YS+ G+GLG+F I
Sbjct: 473 PVFEQQVYRVNLSEEVPPGSYVSGVSATDGDS-GLNANLRYSIVSGNGLGWFHIS----- 526
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T G LDRE+A L + A D+G P+ +Y
Sbjct: 527 EHSGLVTTSAAGG-------------LDRELAS-QIVLNISARDQGVHPKVSY 565
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD P N IS + GG NE HF + +K
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSPAANGNISVQILGG---------NEQ--RHFEVQRSK 413
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD-KGTPPRETYKA 118
+ P I V LDRE P YNLT+ D G PP +A
Sbjct: 414 V-PNLSL----IKVASALDRERIP-SYNLTVSVSDNSGAPPTAEVQA 454
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N+ I Y ++ +EG
Sbjct: 246 NPPVFGSSHYQAGVPEDAVVGSSVLQVAAADAD-EGTNADIRYRLQ-----------DEG 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P ++DP T I V + LD E A Y+LT++A D+G P
Sbjct: 294 -------TPFQMDPETGL----ITVREPLDFE-ARRQYSLTVQATDRGVP 331
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G+N+ + Y++ G + G F+
Sbjct: 1311 NTPSFPKSTLFVDVLENMRIGELVSSVTATDSD-SGVNADLHYTITGSNNHGTFS----- 1364
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1365 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1402
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQATV E T V+ + A+D D G N I YS+ G+ F+ID
Sbjct: 1206 NAPKFLKDFYQATVSETATNLTQVLRVSASDVD-EGNNGLIHYSILKGNEERQFSID--- 1261
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ + ++ LD E P Y+L ++AVD GT P
Sbjct: 1262 -----------------RFSGQVTLVGKLDYEATP-AYSLLIQAVDSGTVP 1294
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 24/108 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ +Y + E+ P GT V+ + A+DAD N+ ISYS+ GG+ FT
Sbjct: 2360 NVPTFASNMYFTAIPEDAPTGTDVLLVNASDAD-AATNAVISYSIIGGN--SQFT----- 2411
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
I+P T + I+ LLDRE Y L + A D G
Sbjct: 2412 -----------INPSTGQ----IITSALLDRETKD-NYTLVVVASDAG 2443
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF + TV EN P GT VI L A DAD G N+ I+Y+V+ D F ID
Sbjct: 3192 NSPVFVPDEFFPTVMENAPSGTTVIHLNATDAD-SGANAVIAYTVQSSDS-DLFVID 3246
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G VI A D+D G++ + SY + G+ G F +D
Sbjct: 131 NAPVFPDPSIVVTFKEDSGSGRQVILDTATDSDIGSNGVDHR-SYRIVRGNEAGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P R Y
Sbjct: 189 -----------ITLNPSGEGAFLHLVSKGGLDREVTP-QYQLLVEVEDKGEPKRRGY 233
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y+ T+ E++P+ + ++A D D G N +I+Y++ G+ F I +G
Sbjct: 992 NPPVFDQISYEVTLSESEPVNSRFFKVQALDKD-SGANGEIAYAITDGNSGEAFGIFPDG 1050
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D + + +VV DR + PL + + +
Sbjct: 1051 QL----YIKSELDRELQDRYVLLVVAS--DRAVEPLSATVNVTVI 1089
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS AT+ E+ IG++V T+ A D D MN ISY++ G+ G F I++
Sbjct: 3087 HTPEFSQSHISATIPESHSIGSVVRTVSARDRD-TAMNGLISYNISSGNEEGIFAINSST 3145
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ + + K LD E++ + +T+ A D G R Y
Sbjct: 3146 GV--------------------VTLAKALDYELSS-KHEMTISATDGGWVARTGY 3179
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F Y V +N +GT +I + A D G+NS++ Y V G+ LG F +DN+
Sbjct: 2981 NPPQFLKNKYFTPVTKNVKVGTKLIKVTAVDDKDFGLNSEVEYFVSNGNHLGKFKLDND 3039
Score = 39.3 bits (90), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A ++EN+P G+ V T+ A D D G N + YS+ GD
Sbjct: 685 NSPVFYPVQYFAHIQENEPGGSYVTTVSATDPD-MGPNGTVKYSISAGD 732
Score = 35.0 bits (79), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
+ P FS VY + E+ G+LV + A D D G+N +ISY V DG G F ++
Sbjct: 1837 HTPRFSRPVYSFDIPEDTTPGSLVAAILATD-DDSGVNGEISYVVEEDDGDGVFFLN 1892
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 21/98 (21%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKI 73
++ EN P+GT VI++ A D D +N ++SY++ I NHF I K
Sbjct: 1428 SIVENIPLGTSVISVTAHDPD-ADINGQLSYAI----------IQQMPRGNHFSIDEVK- 1475
Query: 74 DPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
GT I +DRE A L + LT++A D+ P
Sbjct: 1476 --GT------IYTSAEIDREFANL-FELTVKANDQAVP 1504
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVFS Y V EN +G V ++ A D +N+ ISY + GD G F ++
Sbjct: 789 NPPVFSQAAYSFVVFENVALGYHVGSVSATTMD---LNANISYLITTGDQRGMFAMN 842
>gi|395814685|ref|XP_003780875.1| PREDICTED: protocadherin Fat 3 isoform 2 [Otolemur garnettii]
Length = 4589
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 55/112 (49%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D PG + +I YS+R G GLG F+ID+E
Sbjct: 1038 LHTPYFPDFAVVGSVKENSRIGTSVLQVTARDED-PGRDGEIQYSIRDGSGLGRFSIDDE 1096
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I +LDRE Y LT+ A D+G P
Sbjct: 1097 SGV--------------------ITAADILDRETTS-SYWLTVYATDRGVVP 1127
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 2920 NAPVFAHEVYRGNVKESDPPGEVVAVLSTWDRDTSHVNRQVSYHITGGNPRGRFAL---- 2975
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 2976 --------------GLVQSEWKVYVKRPLDREEQDM-YFLNITATD 3006
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS +Y A + E+ +G VI L A D D N +I +S+ GD FT+D
Sbjct: 3337 NPPKFSQDIYSAVISEDALVGDSVILLIAEDVDSQP-NGQIHFSIVSGDRDNEFTVDPVL 3395
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L + V K LDRE GY+L ++AVD G P
Sbjct: 3396 GL--------------------VKVKKKLDRERVS-GYSLLVQAVDSGIP 3424
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 25/109 (22%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS +Y A V+EN GT VI ++A D D PG ++SY++ F ID G
Sbjct: 2493 SPAFSQSIYVAEVRENAAAGTKVIHVRATDGD-PGTYGQVSYAIINDFAKDRFLIDGNG- 2550
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLT--LRAVDKG 109
+V + LDRE PL +++ LRA+D G
Sbjct: 2551 --------------------QVVTTERLDRE-NPLEGDISIFLRALDGG 2578
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 25/109 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y A V EN L+ ++A D D G+N K+ YS+ G G F+ID+
Sbjct: 3127 NPPMFSSDHYNACVYENTATKALLTRVQAVDPD-VGINRKVVYSLADSAG-GVFSIDSWS 3184
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKL-LDREIAPLGYNLTLRAVDKG 109
IV+L+ LDRE P YN++++A D+
Sbjct: 3185 ---------------------GIVILEQPLDREQQP-SYNISVQATDQS 3211
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D S+S+ G+ F +D G
Sbjct: 3442 NSPVFTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPPFSFSILSGNEEEEFMLDPHG 3501
Query: 62 PL 63
L
Sbjct: 3502 IL 3503
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 48/113 (42%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F Y V E+ P+GT ++T+ A D D G N I+YS+ + L +
Sbjct: 468 HTPEFQQAQYDTYVNESVPVGTSILTVSAFDKD-KGENGYITYSIASLNLLPF------- 519
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 520 AINQFTGV--------------ISTTEELDFESSPETYRFIVRASDWGSPYRH 558
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y A E+ P +++ + A DAD G N I YS+ G +F
Sbjct: 3025 NSPVCDQVAYTALFPEDIPSNKIILKVSAKDAD-IGSNGDIRYSLYGPGNNEFF------ 3077
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+DP + + + L LLDRE P+ YNL RA D G
Sbjct: 3078 -----------LDPESGE----LKTLALLDRERVPV-YNLIARATDGG 3109
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N PVF+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D+
Sbjct: 2390 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYSILSGNDRTSFLMDS 2446
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 24/110 (21%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFR 67
F VKE+ P+G ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 729 FPSDVAVKEDLPVGANILKIKAYDAD-SGFNGKVLFTISDGNTDSCFNIDMETGQLK--- 784
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 785 ------------------VLMPMDREQTDL-YLLNITIYDLGNPQKSSWR 815
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 25 VITLKAADADPPGMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYN 83
V+T+ +D G N +I S S+ GD L F + EG EY
Sbjct: 284 VVTVDDSDE---GANGEIESVSIVAGDPLDQFFLAKEGKW---------------LNEYK 325
Query: 84 IVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I K +D E GYNLTL+A DKG+P +
Sbjct: 326 IKERKQVDWESFSYGYNLTLQAKDKGSPQK 355
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ GT V+ + A D G N++I+Y +R G+ G F+I+
Sbjct: 3232 NPPVFERRDYLVTVPEDTSPGTQVLAVFATSKDI-GTNAEITYLIRSGNEQGKFSIN--- 3287
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I V ++LD E+ Y L + A D GTP
Sbjct: 3288 -----------------PKTGGISVSEVLDYELCKRFY-LVVEAKDGGTP 3319
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG----LGYFTI 57
N PVF Y+ + E P+GT + ++A D D G N +++YS+ + F+I
Sbjct: 2810 NKPVFETSSYETIIMEGMPVGTKLTQVRAQDVD-WGANGQVTYSLHSDSQPEKVMEAFSI 2868
Query: 58 D-NEGPLNHFRIVPTKIDP 75
D N G ++ + + + DP
Sbjct: 2869 DSNTGWISTLKDLDHETDP 2887
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 25/120 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVF Y A V+ + GTL+ + A D D G N +++Y ++ D G+F I+ N
Sbjct: 2080 NSPVFVGLPYYAAVQVDAEPGTLIYQVTAIDKD-KGANGEVTYVLQ--DDYGHFEINPNS 2136
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
G N+++ + + +++ + Y +T+ A D G P T P
Sbjct: 2137 G---------------------NVILKEAFNSDLSNIEYGVTILAKDGGKPSLSTSVELP 2175
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 57/111 (51%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F++ +Y+A+V E+ +G+ V+ + A D D G N+++ Y++ G N G
Sbjct: 1562 HSPYFTNPLYEASVFESAALGSAVLQVTALDKD-KGENAELIYTIEAG---------NTG 1611
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F+I P + T KE ++ + + L++R D+G+PP
Sbjct: 1612 --NTFKIEPV-LGIITVSKEPDMTTMG---------QFVLSVRVTDQGSPP 1650
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ PIGT++ L+ D D G+ ++ YS+ D G F ID
Sbjct: 933 SPAFIPTSYSVKVLEDLPIGTVIAWLETHDPD-LGLGGQVRYSLV-NDYNGRFEID---- 986
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 987 ----------------KASGAIRLSKELDYEKQQF-YNLTVRAKDKGRP 1018
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---------RGGDGL 52
N+PVF Y + E+ IGT +I ++A D D G N +++YSV G+
Sbjct: 827 NSPVFIQDSYSVNILESSSIGTEIIQVEARDKD-LGSNGEVTYSVLTDTRQFAINSSTGI 885
Query: 53 GYFT--IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLL 90
Y +D E N+ + + + ++ +++V LK+
Sbjct: 886 IYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVF 925
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 17/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ S+ +Y V EN P VI ++A D D + K++Y + G+ +F I
Sbjct: 1144 NAPLTSEPIYYPAVMENSPKDVSVIQIQAEDPDSSS-SEKLTYRITSGNPQNFFAINIKT 1202
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNI-VVLKLLDR 92
D E HF V T D G K+ I VV+++ D
Sbjct: 1203 GLITTTSRKLDREQQAEHFLEV-TVTDGGPSPKQSTIWVVVQVQDE 1247
>gi|417407147|gb|JAA50198.1| Putative cadherin egf lag seven-pass g-type receptor [Desmodus
rotundus]
Length = 4593
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 59/116 (50%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVF FV +A VKE+ PIG+ V+T+ A D D G + +I YS+R G G+G F ID E
Sbjct: 1027 LHPPVFPSFVEKAVVKEDVPIGSSVMTVSAHDED-TGRDGEIRYSIRDGSGVGVFKIDEE 1085
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE AP Y LT+ A D+G P ++
Sbjct: 1086 TGV--------------------IETSDRLDRESAP-HYWLTVYATDQGVVPLSSF 1120
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 57/112 (50%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A + E+ + VIT+ A DAD P +NS I YS+ G N+G
Sbjct: 3329 NTPVFSQDPYTAVISEDAVLEQPVITVMADDADGP-LNSHIHYSIIDG---------NQG 3378
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P IDP + + V KLLDRE GY LT++A D G+PPR
Sbjct: 3379 S-------PFTIDPARGE----VKVTKLLDRETIS-GYTLTVQASDNGSPPR 3418
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N +++Y + GGD LG F ++N
Sbjct: 2914 PRFTAEIYKGTVSEDDPPGGVIAILSTTDADSEEINRQVTYYITGGDPLGQFAVEN---- 2969
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V + LDRE Y LT+ A D
Sbjct: 2970 --------------VQSEWKVYVKEPLDRERQD-SYLLTVTATD 2998
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 52/112 (46%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y+A+ EN PIGT V+++ AAD D G +G ++I N
Sbjct: 457 NAPEFTQTAYKASFDENVPIGTTVMSVSAADPD------------EGENGYVTYSIANLN 504
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P VP ID T + V LD E+ P Y L +RA D G P R
Sbjct: 505 P------VPFVIDHFTGAVRTSAV----LDYELMPRVYTLRIRASDWGLPYR 546
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 55/118 (46%), Gaps = 23/118 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS Y TV EN GTL+ ++A D D G+N KI YS+ G F+I
Sbjct: 3119 NAPEFSADPYTMTVFENTEPGTLLTRVQATDPD-AGLNRKIVYSLPDS-ADGQFSISESS 3176
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I + K LDRE+ + Y LTL+A D+G P R T +T
Sbjct: 3177 GI--------------------IQLEKPLDRELQAV-YTLTLKATDQGLPRRLTATST 3213
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y A+V E+ IGT V+ + AA D N++I+YS+ G+ G F+
Sbjct: 3224 NPPVFEYREYSASVSEDTLIGTEVLQVYAASRDIEA-NAEITYSIISGNEHGKFS----- 3277
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
IDP T I +++ LD E + Y LT+ A D GTP
Sbjct: 3278 -----------IDPRTGA----IFLIESLDYE-SSHEYYLTVEATDGGTP 3311
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ G++V+ + A D D G N+++ YS+ G+ FTID
Sbjct: 1556 HAPWFTSSSYEGRVYESAATGSVVLQVTALDKD-KGRNAEVVYSIESGNIGNSFTID--- 1611
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+ +I K LDR + Y+L ++A DKG+PP
Sbjct: 1612 PILG-----------------SIKTAKELDRS-NQVEYDLIVKATDKGSPP 1644
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKEN+P+G+ ++ + A D D G N K+ Y++ GG+ F ID +D
Sbjct: 724 VKENRPVGSSIVLVNATDLD-TGFNGKLVYAISGGNEDSCFLID--------------MD 768
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
G K +L LDRE Y L + D G P + +
Sbjct: 769 TGMLK------ILSPLDRETTD-KYTLNITVSDLGIPQKAAWH 804
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
L FR V + PG+K EY + + +D + P GYNLTL+A DKG PP+
Sbjct: 298 LQQFRTV--RSSPGSK--EYKLKAVGGVDWDSHPFGYNLTLQAKDKGMPPQ 344
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 20/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y AT+ E IGT V+ ++A D+D N +SY + G Y
Sbjct: 2277 NPPVFVQQSYAATLSEASVIGTSVVQVRATDSDSEP-NRGVSYHMFGNHSKSY------- 2328
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+HF +D T I +++ LD E + + +RA+D G PP
Sbjct: 2329 --DHFH-----VDSSTGL----ISLVRTLDYEQVH-QHKIFVRAIDGGMPP 2367
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 20/114 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y+ + N P GT VI + A+DAD G N+ ++Y++ D+E
Sbjct: 2590 NAPQFRATKYEVNIGSNAPKGTSVIKVLASDAD-EGSNADVTYAIEA---------DSES 2639
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I K+ KE L L+ E+ + +RAVD G+PP+ +
Sbjct: 2640 VKENLEI--NKLSGIITTKES----LIGLEDEV----FTFFVRAVDHGSPPKAS 2683
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P+F +Y+A + E+ G V +KA DAD ++ K+ YS+ G+ F +D+E
Sbjct: 2384 NPPLFDQQIYEARISEHAMHGHFVTCVKAYDADSSDVD-KLEYSILSGNDHKNFVMDSE 2441
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 23/101 (22%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
Y+ V+E+ P GT+++ L+A D D G +S++ YS+ G G F +D
Sbjct: 930 YRVKVREDLPEGTIIMWLEAYDPD-LGQSSQVRYSLLDP-GEGNFDVD------------ 975
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT+RA DKG P
Sbjct: 976 --------KLSGAVRIVQQLDFEKKQV-YNLTVRAKDKGKP 1007
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y ++EN+P+G V+ L D D +++ G+ F ++ G
Sbjct: 3434 NAPVFSRENYSVIIQENKPVGFSVLQLLVTDRDSSHNGPPFFFTIESGNDDSAFEVNQRG 3493
Query: 62 PL 63
L
Sbjct: 3494 VL 3495
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N+PV Y+A + ENQP G+ VI ++A+D D G N ++ YS+
Sbjct: 2803 NSPVLESNPYEAFIVENQPGGSRVIQVRASDLD-SGTNGQVMYSL 2846
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 21/114 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S+ VY V EN P V+ + A D D + K++Y + G+ G+F+I
Sbjct: 1133 NAPRTSEPVYYPEVMENSPKDVSVVQIDALDPDSSSSD-KLTYKITSGNPQGFFSI---- 1187
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
H R T + T ++ LDRE + L + D G+PPR T
Sbjct: 1188 ---HPR---TGLITTTSRR---------LDREQQD-EHILEVTVTDNGSPPRST 1225
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + Y A VK + +G ++ + A D D G N ++ Y ++ + +F I G
Sbjct: 2075 NAPVFVNLPYYAVVKVDAAVGHIIRHVTAVDRD-SGKNGEVHYYLK--EHHEHFEIGPSG 2131
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVL 87
++ + + +P T K+Y + V+
Sbjct: 2132 EIS----LKKQFEPDTLNKQYLVTVV 2153
>gi|395814683|ref|XP_003780874.1| PREDICTED: protocadherin Fat 3 isoform 1 [Otolemur garnettii]
Length = 4557
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 55/112 (49%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D PG + +I YS+R G GLG F+ID+E
Sbjct: 1038 LHTPYFPDFAVVGSVKENSRIGTSVLQVTARDED-PGRDGEIQYSIRDGSGLGRFSIDDE 1096
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I +LDRE Y LT+ A D+G P
Sbjct: 1097 SGV--------------------ITAADILDRETTS-SYWLTVYATDRGVVP 1127
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 2920 NAPVFAHEVYRGNVKESDPPGEVVAVLSTWDRDTSHVNRQVSYHITGGNPRGRFAL---- 2975
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 2976 --------------GLVQSEWKVYVKRPLDREEQDM-YFLNITATD 3006
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS +Y A + E+ +G VI L A D D N +I +S+ GD FT+D
Sbjct: 3337 NPPKFSQDIYSAVISEDALVGDSVILLIAEDVDSQP-NGQIHFSIVSGDRDNEFTVDPVL 3395
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L + V K LDRE GY+L ++AVD G P
Sbjct: 3396 GL--------------------VKVKKKLDRERVS-GYSLLVQAVDSGIP 3424
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 25/109 (22%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS +Y A V+EN GT VI ++A D D PG ++SY++ F ID G
Sbjct: 2493 SPAFSQSIYVAEVRENAAAGTKVIHVRATDGD-PGTYGQVSYAIINDFAKDRFLIDGNG- 2550
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLT--LRAVDKG 109
+V + LDRE PL +++ LRA+D G
Sbjct: 2551 --------------------QVVTTERLDRE-NPLEGDISIFLRALDGG 2578
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 25/109 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y A V EN L+ ++A D D G+N K+ YS+ G G F+ID+
Sbjct: 3127 NPPMFSSDHYNACVYENTATKALLTRVQAVDPD-VGINRKVVYSLADSAG-GVFSIDSWS 3184
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKL-LDREIAPLGYNLTLRAVDKG 109
IV+L+ LDRE P YN++++A D+
Sbjct: 3185 ---------------------GIVILEQPLDREQQP-SYNISVQATDQS 3211
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D S+S+ G+ F +D G
Sbjct: 3442 NSPVFTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPPFSFSILSGNEEEEFMLDPHG 3501
Query: 62 PL 63
L
Sbjct: 3502 IL 3503
Score = 39.7 bits (91), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 48/113 (42%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F Y V E+ P+GT ++T+ A D D G N I+YS+ + L +
Sbjct: 468 HTPEFQQAQYDTYVNESVPVGTSILTVSAFDKD-KGENGYITYSIASLNLLPF------- 519
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 520 AINQFTGV--------------ISTTEELDFESSPETYRFIVRASDWGSPYRH 558
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y A E+ P +++ + A DAD G N I YS+ G +F
Sbjct: 3025 NSPVCDQVAYTALFPEDIPSNKIILKVSAKDAD-IGSNGDIRYSLYGPGNNEFF------ 3077
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+DP + + + L LLDRE P+ YNL RA D G
Sbjct: 3078 -----------LDPESGE----LKTLALLDRERVPV-YNLIARATDGG 3109
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N PVF+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D+
Sbjct: 2390 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYSILSGNDRTSFLMDS 2446
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 24/110 (21%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFR 67
F VKE+ P+G ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 729 FPSDVAVKEDLPVGANILKIKAYDAD-SGFNGKVLFTISDGNTDSCFNIDMETGQLK--- 784
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 785 ------------------VLMPMDREQTDL-YLLNITIYDLGNPQKSSWR 815
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 25 VITLKAADADPPGMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYN 83
V+T+ +D G N +I S S+ GD L F + EG EY
Sbjct: 284 VVTVDDSDE---GANGEIESVSIVAGDPLDQFFLAKEGKW---------------LNEYK 325
Query: 84 IVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I K +D E GYNLTL+A DKG+P +
Sbjct: 326 IKERKQVDWESFSYGYNLTLQAKDKGSPQK 355
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ GT V+ + A D G N++I+Y +R G+ G F+I+
Sbjct: 3232 NPPVFERRDYLVTVPEDTSPGTQVLAVFATSKDI-GTNAEITYLIRSGNEQGKFSIN--- 3287
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I V ++LD E+ Y L + A D GTP
Sbjct: 3288 -----------------PKTGGISVSEVLDYELCKRFY-LVVEAKDGGTP 3319
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG----LGYFTI 57
N PVF Y+ + E P+GT + ++A D D G N +++YS+ + F+I
Sbjct: 2810 NKPVFETSSYETIIMEGMPVGTKLTQVRAQDVD-WGANGQVTYSLHSDSQPEKVMEAFSI 2868
Query: 58 D-NEGPLNHFRIVPTKIDP 75
D N G ++ + + + DP
Sbjct: 2869 DSNTGWISTLKDLDHETDP 2887
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 25/120 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVF Y A V+ + GTL+ + A D D G N +++Y ++ D G+F I+ N
Sbjct: 2080 NSPVFVGLPYYAAVQVDAEPGTLIYQVTAIDKD-KGANGEVTYVLQ--DDYGHFEINPNS 2136
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
G N+++ + + +++ + Y +T+ A D G P T P
Sbjct: 2137 G---------------------NVILKEAFNSDLSNIEYGVTILAKDGGKPSLSTSVELP 2175
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ PIGT++ L+ D D G+ ++ YS+ D G F ID
Sbjct: 933 SPAFIPTSYSVKVLEDLPIGTVIAWLETHDPD-LGLGGQVRYSLV-NDYNGRFEID---- 986
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 987 ----------------KASGAIRLSKELDYEKQQF-YNLTVRAKDKGRP 1018
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 57/111 (51%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F++ +Y+A+V E+ +G+ V+ + A D D G N+++ Y++ G N G
Sbjct: 1562 HSPYFTNPLYEASVFESAALGSAVLQVTALDKD-KGENAELIYTIEAG---------NTG 1611
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F+I P + T KE ++ + + L++R D+G+PP
Sbjct: 1612 --NTFKIEPV-LGIITVSKEPDMTTMG---------QFVLSVRVTDQGSPP 1650
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---------RGGDGL 52
N+PVF Y + E+ IGT +I ++A D D G N +++YSV G+
Sbjct: 827 NSPVFIQDSYSVNILESSSIGTEIIQVEARDKD-LGSNGEVTYSVLTDTRQFAINSSTGI 885
Query: 53 GYFT--IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLL 90
Y +D E N+ + + + ++ +++V LK+
Sbjct: 886 IYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVF 925
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 17/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ S+ +Y V EN P VI ++A D D + K++Y + G+ +F I
Sbjct: 1144 NAPLTSEPIYYPAVMENSPKDVSVIQIQAEDPDSSS-SEKLTYRITSGNPQNFFAINIKT 1202
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNI-VVLKLLDR 92
D E HF V T D G K+ I VV+++ D
Sbjct: 1203 GLITTTSRKLDREQQAEHFLEV-TVTDGGPSPKQSTIWVVVQVQDE 1247
>gi|395542254|ref|XP_003773048.1| PREDICTED: protocadherin Fat 1 [Sarcophilus harrisii]
Length = 4589
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P+FS FV +A VKE+ PIGT V+T+ A D D G + +I +S+RGG G+G F ID E
Sbjct: 1030 LHPPLFSSFVDKALVKEDVPIGTSVMTVSAHDED-TGRDGEIHFSIRGGSGIGIFKIDEE 1088
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I + LDRE Y LT+ A D+G P ++
Sbjct: 1089 KGV--------------------IETAEKLDRETVS-HYWLTVFATDQGVVPLSSF 1123
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 57/112 (50%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A + E+ + V+T+ A DAD P N+ I YS+ G+ FTID
Sbjct: 3332 NTPVFSQDTYTAVISEDAVLEQSVVTVMADDADGPS-NNYIHYSIIDGNQGNPFTID--- 3387
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P K + I V +LLDRE+ GY LT++A D G+PPR
Sbjct: 3388 --------PVKGE---------IKVTQLLDREMIS-GYTLTVQAADNGSPPR 3421
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ +Y+ TV E+ P G ++ L DAD +N +++Y + GGD LG F ++N
Sbjct: 2915 NPPRFTAEIYKGTVSEDDPPGGVIAILSTTDADTEEINRQVTYYITGGDPLGQFAVEN-- 2972
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE Y LT+ A D
Sbjct: 2973 ----------------IQNEWKVYVKKPLDREKKD-NYLLTITATD 3001
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 56/119 (47%), Gaps = 25/119 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP FS Y TV EN T + ++A DAD G+N KI+YS V D G F+ID
Sbjct: 3122 NAPEFSADPYAITVFENTEPKTPLTRVQATDAD-AGLNHKIAYSLVNSAD--GQFSIDES 3178
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I + K LDRE+ + YNL L+AVD G P R T T
Sbjct: 3179 SGI--------------------IRLEKPLDRELQAV-YNLILKAVDHGVPRRLTATGT 3216
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 19/90 (21%)
Query: 25 VITLKAADADPPGMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYN 83
V+T++ D G N +I S S+ GD PL FR V + PG+K EY
Sbjct: 276 VVTVEDNDQ---GSNGEIASLSIVAGD-----------PLQQFRTVRSF--PGSK--EYK 317
Query: 84 IVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I + +D E P GYNLTL+A DKG PP+
Sbjct: 318 IKTVGNVDWESHPFGYNLTLQAKDKGNPPQ 347
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 22/117 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+ + EN P+GT V+++ A D+D G N ++YS+ + + +
Sbjct: 460 NPPEFTQTSYKTSFDENIPVGTSVMSVSAIDSD-EGENGYVTYSIANLNQVPFV------ 512
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
+NHF + + LD E+ P Y L +RA D G P R +A
Sbjct: 513 -INHFTGA--------------VSTSEELDYELMPRVYTLRVRASDWGLPYRREVEA 554
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 22/102 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKEN P+G+ +I + A D D G N K+ YS+ GG+ F ID E +
Sbjct: 727 VKENYPVGSNIILMNATDLD-SGFNGKLVYSISGGNDDSCFIIDLETGM----------- 774
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ VL LDRE Y L + D G P + +
Sbjct: 775 ---------LKVLSPLDRETTE-KYTLNITVYDLGIPQKAAW 806
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ YQ V E+ +G++V+ + A D D G N+++ YS+ G+ FTID
Sbjct: 1559 HAPWFTSSSYQGRVYESAAVGSVVLQVTALDKD-KGENAEVLYSIESGNIGNSFTID--- 1614
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+ ++D +++ Y+L ++A D+G PP
Sbjct: 1615 PILGSIKTAKELDHSNQEE------------------YDLMVKATDRGNPP 1647
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P+F +Y+A + E P G V +KA DAD ++ K+ YS+ G+ F ID++
Sbjct: 2387 NPPLFDQLLYEAKISEQAPHGHFVTCVKAYDADSSDID-KLEYSILSGNEHKNFAIDSK 2444
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 54/114 (47%), Gaps = 10/114 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y ++EN+P+G V+ L D D +S+ G+ F ++ EG
Sbjct: 3437 NPPVFSKGNYSIIIQENKPVGVSVLQLVVTDKDSSHNGPPFFFSIMSGNEEKAFEVNQEG 3496
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR---EIAPLGYNLTLRAVDKGTPP 112
++ T + K K++ + +K+ D +++ L Y + +R +++ P
Sbjct: 3497 ------VLITSMAIKRKVKDHYFLHVKVADSGKPQLSSLAY-IDIRVIEESIYP 3543
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ +GT V+ + AA D +N++I+Y++ G+ G F+ID+
Sbjct: 3227 NPPVFEYREYGATVPEDILVGTEVLQVYAASRDIE-VNAEITYAIISGNEHGKFSIDSTT 3285
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I ++ LD E + Y LT+ A D GTP
Sbjct: 3286 GA--------------------IFIIDNLDYE-SSHEYYLTVEATDGGTP 3314
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 28/118 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y+ T+ + P GT VI + A+DAD G N+ I YS+ D+E
Sbjct: 2593 NAPQFRATKYKVTIGSDAPKGTSVIKVLASDAD-EGSNADIMYSIEA---------DSES 2642
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKL----LDREIAPLGYNLTLRAVDKGTPPRET 115
+ I K + I+ K L+ EI + +RAVD G+P +E+
Sbjct: 2643 VQENLEI----------NKLFGIITTKESLVGLENEI----FTFFVRAVDGGSPSKES 2686
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+++P+F Y+ + EN P+ TLV +KA D D G+ +I+Y + F I+
Sbjct: 2488 LHSPIFMQNEYEVELAENAPLQTLVFEVKATDED-SGIYGQITYHIVNDFAKDRFYINER 2546
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
G + K+D T ++ ++ ++L+ ++
Sbjct: 2547 GQI----FTSEKLDRETAGEK--VIAIRLMAKD 2573
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
NAP S+ VY V EN P V+ ++A D D N K++Y + G+ G+F+I
Sbjct: 1136 NAPQTSEPVYYPEVMENSPKDVSVVQIEAFDPDSSS-NDKLTYKITSGNPQGFFSI 1190
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTID 58
N+P+ Y+A + EN P G+ VI +KA D D G N +I YS+ + D + F ID
Sbjct: 2806 NSPILESNPYEAFIVENLPGGSKVIQVKATDLD-SGTNGQILYSLDQSQSLDVIESFAID 2864
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVL 87
E I K K+ +Y+I V+
Sbjct: 2865 METGW----ITTLKELDHEKRDKYHITVI 2889
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + Y A VK + +G ++ + A D D G N ++ Y ++ + +F I G
Sbjct: 2078 NAPVFVNLPYYAVVKVDAEVGHIIRCVTAVDRD-IGRNGEVHYYLK--EHHEHFQIGPSG 2134
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVL 87
++ + K +P T KEY I ++
Sbjct: 2135 EIS----LKKKFEPDTLNKEYLITIV 2156
Score = 36.2 bits (82), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F + V+E+ P GT+++ L+A D D G +S++ YS+ +G G F +D
Sbjct: 924 NPPKFIPSNFLVKVREDLPEGTIIMWLEAYDPD-FGQSSQVRYSLI-DNGDGNFDVD--- 978
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I +++ LD E + YNLT++A DKG P
Sbjct: 979 -----------------KLSGAIRIVQQLDFEKKQV-YNLTIKARDKGKP 1010
>gi|324502384|gb|ADY41050.1| Cadherin-4, partial [Ascaris suum]
Length = 1195
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/112 (37%), Positives = 60/112 (53%), Gaps = 24/112 (21%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++APVFSD ++A+V EN P+GT VI L+A D D P ++ + Y++ GDG+GYF +D
Sbjct: 428 VHAPVFSDIAHEASVYENMPVGTEVIALQAFDPDDP--DAAVKYAIVDGDGMGYFMVDPA 485
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G IV T I +LDRE+ Y L + A D + P
Sbjct: 486 G------IVRTSI---------------VLDREVESR-YWLAIEAEDAASVP 515
Score = 40.4 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 24/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y + E+ IG+ ++ L A D D G N++I+Y + G D + IDNE
Sbjct: 213 NAPRFDKPFYNVRIAEDIAIGSEILVLTATDED-FGDNARIAYKLAGDD--AHVEIDNEK 269
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ R DRE + Y ++ A D G PP+ T+
Sbjct: 270 GILRVR--------------------NQFDRETNEI-YRFSVVAYDHGHPPKLTF 303
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMN---SKISYSVRGGDGLGYFTID 58
NAP+ S +Y A+V EN P T+V+ ++A D D P +++ + + GD +F++D
Sbjct: 532 NAPLPSRAIYFASVPENSPEDTVVVKVEAEDRDEPPSGEDRAELRFRIASGDPQSFFSVD 591
>gi|13929168|ref|NP_114007.1| protocadherin Fat 1 precursor [Rattus norvegicus]
gi|4426629|gb|AAD20459.1| protocadherin [Rattus norvegicus]
Length = 4589
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++APVFS FV + TVKE+ P+G+ V+T+ A D D G + +I YS+R G G+G F ID E
Sbjct: 1030 LHAPVFSSFVEKGTVKEDVPMGSSVMTVSAHDED-TGRDGEIRYSIRDGSGVGVFRIDEE 1088
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE + Y LT+ A D+G P ++
Sbjct: 1089 TGV--------------------IETSDRLDRE-STSHYWLTVYATDQGVVPLSSF 1123
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVFS Y V E+ + VIT+ A DAD P NS I YS+ G+ FTID
Sbjct: 3332 NSPVFSQDSYTTVVSEDAALEQPVITIMADDADGPS-NSHILYSIIEGNQGSPFTID--- 3387
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P + + I V K LDRE GY LT++A D G PPR
Sbjct: 3388 --------PVRGE---------IKVTKPLDRETIS-GYTLTVQAADNGNPPR 3421
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N ++SY + GGD LG F ++N
Sbjct: 2917 PRFTAEIYKGTVSEDDPPGGVIAILSTTDADSEEINRQVSYFITGGDALGQFAVEN---- 2972
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ ++ + V K LDRE Y LT+ A D
Sbjct: 2973 --------------MQNDWRVYVKKPLDREQKD-SYLLTVTATD 3001
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ IGT V+ + AA D N++I+Y++ G+ G F+ID+
Sbjct: 3227 NPPVFEYREYGATVSEDIVIGTEVLQVYAASRDIEA-NAEITYAIISGNEHGKFSIDS-- 3283
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I +++ LD E + GY LT+ A D GTP
Sbjct: 3284 ------------------KTGAIFIIENLDYE-SSHGYYLTVEATDGGTP 3314
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A+ EN P+GT V+ + A D D G N ++YS+
Sbjct: 460 NPPEFTQTSYKASFDENAPVGTPVMRVSAVDPD-EGENGYVTYSI--------------A 504
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
LNH VP ID T + + LD E+ P Y L +RA D G P R
Sbjct: 505 NLNH---VPFVIDHFTGA----VSTSENLDYELMPRVYTLRIRASDWGLPYR 549
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 56/118 (47%), Gaps = 23/118 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y TV EN GT + ++A DAD G+N KISYS+ G F+I+ +
Sbjct: 3122 NTPEFTADPYAITVFENTEPGTPLTRVQATDAD-AGLNRKISYSLLDS-ADGQFSINEQS 3179
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ + + K LDRE+ + Y LTL+A D+G P + T T
Sbjct: 3180 GI--------------------LQLEKHLDRELQAV-YTLTLKAADQGLPRKLTATGT 3216
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKE+ P+G ++ + A D D G N K+ Y++ GG+ FT+D E +
Sbjct: 727 VKEDLPVGASILFMNATDLDS-GFNGKLVYAISGGNDDSCFTVDMETGM----------- 774
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ VL LDRE+ Y L + D G P R ++
Sbjct: 775 ---------LKVLSPLDREVTD-KYTLNITVYDLGIPQRAAWR 807
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y V+E+ P GT+++ L+A D D G +S++ YS+ G G+F +D
Sbjct: 924 NPPRFIPPSYSVKVREDLPEGTIIMWLEAHDPD-VGQSSQVRYSLL-DHGEGHFDVD--- 978
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E L YNLT+RA DKG P
Sbjct: 979 -----------------KLSGAVRIVQQLDFEKKQL-YNLTVRAKDKGKP 1010
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F+ Y+ V E+ +G++V+ + A D D G N+++ YS+ G+ FTID
Sbjct: 1559 HSPWFTSSSYEGRVYESAAVGSVVLQVTALDRDK-GRNAEVLYSIESGNIGNSFTID--- 1614
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+ +I + LDR + Y+L ++A DKG PP
Sbjct: 1615 PILG-----------------SIKTARELDRS-HQVDYDLMVKATDKGEPP 1647
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P+F VY+A + E+ G V+ +KA DAD ++ ++ YS+ G+ F ID E
Sbjct: 2387 NPPLFEQQVYEARISEHAAHGHFVMCVKACDADRSDLD-RLEYSILSGNDHKSFVIDGE 2444
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 55/114 (48%), Gaps = 10/114 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS Y ++EN+P+G V+ L D D S+++ G+ F ++ G
Sbjct: 3437 NAPLFSRDNYSVIIQENKPVGFSVLKLVVTDKDSSHNGPPFSFAIVSGNDDNMFEVNQHG 3496
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR---EIAPLGYNLTLRAVDKGTPP 112
L V K+ K++ ++ +K+ D +++ L + + +R +++ P
Sbjct: 3497 VLLTAATVKRKV------KDHYLLHVKVADNGKPQLSSLTH-IDIRVIEESIHP 3543
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTID 58
N+PV Y+A + EN P G+ VI ++A+D D G+N ++ YS+ + D + F I+
Sbjct: 2806 NSPVLESNPYEAFIVENLPAGSRVIQVRASDLD-SGVNGQVMYSLDQSQDADIIESFAIN 2864
Query: 59 NE 60
E
Sbjct: 2865 ME 2866
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 19/90 (21%)
Query: 25 VITLKAADADPPGMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYN 83
+IT++ D G N +I S S+ GD L F+ V + PG+K +
Sbjct: 276 IITVEDCDQ---GANGEIASLSIVAGD-----------LLQQFKTVRSF--PGSKA--FK 317
Query: 84 IVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ + +D + P GYNLT++A DKGTPP+
Sbjct: 318 VKAVGGVDWDSHPYGYNLTVQAKDKGTPPQ 347
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 21/114 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S+ VY + EN P V+ ++A D D + K++Y + G+ G+F+I +
Sbjct: 1136 NAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSSD-KLTYRITSGNPQGFFSIHPK- 1193
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
T + T +K LDRE + L + D G PPR T
Sbjct: 1194 ---------TGLITTTSRK---------LDREQQD-EHILEVTVTDNGVPPRST 1228
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+++PVF Y+ + EN P+ TLV+ +KA D D G+ ++Y + F +++
Sbjct: 2488 LHSPVFHQNEYEVELAENAPLHTLVVQVKATDRD-SGIYGHLTYHLVNDFAKDRFYVNDG 2546
Query: 61 GPL 63
G +
Sbjct: 2547 GQV 2549
>gi|149021384|gb|EDL78847.1| rCG59113 [Rattus norvegicus]
Length = 4589
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++APVFS FV + TVKE+ P+G+ V+T+ A D D G + +I YS+R G G+G F ID E
Sbjct: 1030 LHAPVFSSFVEKGTVKEDVPMGSSVMTVSAHDED-TGRDGEIRYSIRDGSGVGVFRIDEE 1088
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE + Y LT+ A D+G P ++
Sbjct: 1089 TGV--------------------IETSDRLDRE-STSHYWLTVYATDQGVVPLSSF 1123
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVFS Y V E+ + VIT+ A DAD P NS I YS+ G+ FTID
Sbjct: 3332 NSPVFSQDSYTTVVSEDAALEQPVITIMADDADGPS-NSHILYSIIEGNQGSPFTID--- 3387
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P + + I V K LDRE GY LT++A D G PPR
Sbjct: 3388 --------PVRGE---------IKVTKPLDRETIS-GYTLTVQAADNGNPPR 3421
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N ++SY + GGD LG F ++N
Sbjct: 2917 PRFTAEIYKGTVSEDDPPGGVIAILSTTDADSEEINRQVSYFITGGDALGQFAVEN---- 2972
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ ++ + V K LDRE Y LT+ A D
Sbjct: 2973 --------------MQNDWRVYVKKPLDREQKD-SYLLTVTATD 3001
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ IGT V+ + AA D N++I+Y++ G+ G F+ID+
Sbjct: 3227 NPPVFEYREYGATVSEDIVIGTEVLQVYAASRDIEA-NAEITYAIISGNEHGKFSIDS-- 3283
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I +++ LD E + GY LT+ A D GTP
Sbjct: 3284 ------------------KTGAIFIIENLDYE-SSHGYYLTVEATDGGTP 3314
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 56/118 (47%), Gaps = 23/118 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y TV EN GT + ++A DAD G+N KISYS+ G F+I+ +
Sbjct: 3122 NTPEFTADPYAITVFENTEPGTPLTRVQATDAD-AGLNRKISYSLLDS-ADGQFSINEQS 3179
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ + + K LDRE+ + Y LTL+A D+G P + T T
Sbjct: 3180 GI--------------------LQLEKHLDRELQAV-YTLTLKAADQGLPRKLTATGT 3216
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A+ EN P+GT V+ + A D D G N ++YS+
Sbjct: 460 NPPEFTQTSYKASFDENAPVGTPVMRVSAVDPD-EGENGYVTYSI--------------A 504
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
LNH VP ID T + + LD E+ P Y L +RA D G P R
Sbjct: 505 NLNH---VPFVIDHFTGA----VSTSENLDYELMPRVYMLRIRASDWGLPYR 549
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKE+ P+G ++ + A D D G N K+ Y++ GG+ FT+D E +
Sbjct: 727 VKEDLPVGASILFMNATDLDS-GFNGKLVYAISGGNDDSCFTVDMETGM----------- 774
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ VL LDRE+ Y L + D G P R ++
Sbjct: 775 ---------LKVLSPLDREVTD-KYTLNITVYDLGIPQRAAWR 807
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y V+E+ P GT+++ L+A D D G +S++ YS+ G G+F +D
Sbjct: 924 NPPRFIPPSYSVKVREDLPEGTIIMWLEAHDPD-VGQSSQVRYSLL-DHGEGHFDVD--- 978
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E L YNLT+RA DKG P
Sbjct: 979 -----------------KLSGAVRIVQQLDFEKKQL-YNLTVRAKDKGKP 1010
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F+ Y+ V E+ +G++V+ + A D D G N+++ YS+ G+ FTID
Sbjct: 1559 HSPWFTSSSYEGRVYESAAVGSVVLQVTALDRDK-GRNAEVLYSIESGNIGNSFTID--- 1614
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+ +I + LDR + Y+L ++A DKG PP
Sbjct: 1615 PILG-----------------SIKTARELDRS-HQVDYDLMVKATDKGEPP 1647
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P+F VY+A + E+ G V+ +KA DAD ++ ++ YS+ G+ F ID E
Sbjct: 2387 NPPLFEQQVYEARISEHAAHGHFVMCVKACDADRSDLD-RLEYSILSGNDHKSFVIDGE 2444
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 55/114 (48%), Gaps = 10/114 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS Y ++EN+P+G V+ L D D S+++ G+ F ++ G
Sbjct: 3437 NAPLFSRDNYSVIIQENKPVGFSVLKLVVTDKDSSHNGPPFSFAIVSGNDDNMFEVNQHG 3496
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR---EIAPLGYNLTLRAVDKGTPP 112
L V K+ K++ ++ +K+ D +++ L + + +R +++ P
Sbjct: 3497 VLLTAATVKRKV------KDHYLLHVKVADNGKPQLSSLTH-IDIRVIEESIHP 3543
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTID 58
N+PV Y+A + EN P G+ VI ++A+D D G+N ++ YS+ + D + F I+
Sbjct: 2806 NSPVLESNPYEAFIVENLPAGSRVIQVRASDLD-SGVNGQVMYSLDQSQDADIIESFAIN 2864
Query: 59 NE 60
E
Sbjct: 2865 ME 2866
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 19/90 (21%)
Query: 25 VITLKAADADPPGMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYN 83
+IT++ D G N +I S S+ GD L F+ V + PG+K +
Sbjct: 276 IITVEDCDQ---GANGEIASLSIVAGD-----------LLQQFKTVRSF--PGSKA--FK 317
Query: 84 IVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ + +D + P GYNLT++A DKGTPP+
Sbjct: 318 VKAVGGVDWDSHPYGYNLTVQAKDKGTPPQ 347
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 21/114 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S+ VY + EN P V+ ++A D D + K++Y + G+ G+F+I +
Sbjct: 1136 NAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSSD-KLTYRITSGNPQGFFSIHPK- 1193
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
T + T +K LDRE + L + D G PPR T
Sbjct: 1194 ---------TGLITTTSRK---------LDREQQD-EHILEVTVTDNGVPPRST 1228
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+++PVF Y+ + EN P+ TLV+ +KA D D G+ ++Y + F +++
Sbjct: 2488 LHSPVFHQNEYEVELAENAPLHTLVVQVKATDRD-SGIYGHLTYHLVNDFAKDRFYVNDG 2546
Query: 61 GPL 63
G +
Sbjct: 2547 GQV 2549
>gi|380790103|gb|AFE66927.1| protocadherin Fat 1 precursor [Macaca mulatta]
Length = 4588
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 58/112 (51%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y A V E+ + VIT+ A DAD P NS I YS+ G+ G FTID
Sbjct: 3331 NAPVFSQDTYTAVVSEDAVLEQSVITVLADDADGPS-NSHIHYSIIDGNQGGPFTID--- 3386
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P + + + V KLLDRE GY LT++A D G+PPR
Sbjct: 3387 --------PVRGE---------VKVTKLLDRETIS-GYTLTVQASDNGSPPR 3420
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 58/116 (50%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVFS FV + VKE+ P+G+LV+T+ A D D G + +I YS+R G G+G F I E
Sbjct: 1029 LHPPVFSSFVERGAVKEDTPVGSLVMTVSAHDED-AGRDGEIRYSIRDGSGVGVFKIGEE 1087
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE + Y LT+ A D+G P ++
Sbjct: 1088 TGI--------------------IETSDRLDRE-STSHYWLTVFATDQGVVPLSSF 1122
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N +++Y + GGD LG F ++N
Sbjct: 2916 PRFTAEIYKGTVSEDDPPGGVIAILSTTDADSEEINRQVTYFITGGDPLGQFAVEN---- 2971
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE Y LT+ A D
Sbjct: 2972 --------------IQNEWKVYVKKPLDREKRD-NYLLTITATD 3000
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 58/119 (48%), Gaps = 25/119 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP FS Y TV EN GTL+ ++A DAD G+N KI YS + D G F+I+
Sbjct: 3121 NAPEFSADPYAITVFENTEPGTLLTRVQATDAD-SGLNRKILYSLIDSAD--GQFSINEL 3177
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I + K LDRE+ + Y L+L+AVD+G P R T T
Sbjct: 3178 SGI--------------------IQLEKPLDRELQAV-YTLSLKAVDQGLPRRLTATGT 3215
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A EN PIGT V++L A D D G N ++YS+
Sbjct: 459 NPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPD-EGENGYVTYSITN------------- 504
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
LNH VP ID T + + LD E+ P Y L +RA D G P
Sbjct: 505 -LNH---VPFVIDHFTGA----VSTSENLDYELMPRVYTLRIRASDWGLP 546
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 20/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ Y AT+ E IGT V+ ++A D+D N ISY + G +
Sbjct: 2279 NAPVFAQQSYAATLSEASVIGTSVVQVRATDSDSEP-NRGISYQLSGNLSKSH------- 2330
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+HF +D T I +L+ LD E + + + +RAVD G PP
Sbjct: 2331 --DHFH-----VDSSTGL----ISLLRTLDYEQSQR-HTIFVRAVDGGMPP 2369
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKENQP+G+ VI + + D D G N K+ Y++ GG+ F ID E +
Sbjct: 726 VKENQPVGSSVIFMNSTDLD-TGFNGKLVYAISGGNEDSCFMIDMETGM----------- 773
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ +L LDRE Y L + D G P + ++
Sbjct: 774 ---------LKILSPLDRETTD-KYTLNITVYDLGIPQKAAWR 806
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ +GT V+ + AA D N++I+YS+ G+ G F+ID+
Sbjct: 3226 NPPVFEYREYGATVSEDILVGTEVLQVYAASRDIEA-NAEITYSIISGNEHGKFSIDS-- 3282
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + Y LT+ A D GTP
Sbjct: 3283 ------------------KTGAVFIIENLDYE-SSHEYYLTIEATDGGTP 3313
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 10 VYQATVKENQPIGTLV-ITLKAADADPPGMNSKISYSVRGGDG-LGYFTIDNEGPLNHFR 67
V+ E P+ T V ++ D DP + +G +G + +I L FR
Sbjct: 245 VHIEQANECAPVITAVTLSPSELDRDPTYAIVTVDDCDQGANGEIASLSIVAGDLLQQFR 304
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
V + PG+K EY + + +D + P GYNLTL+A DKGTPP+
Sbjct: 305 TVRSF--PGSK--EYKVKAISGVDWDSHPFGYNLTLQAKDKGTPPQ 346
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P+F +Y+A + E+ P G V +KA DAD ++ K+ YS+ G+ +F ID+
Sbjct: 2386 NPPLFEQQIYEARISEHAPHGHFVTCVKAYDADSSDID-KLQYSILSGNDHKHFIIDS 2442
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ +G++V+ + A D D G N+++ YS+ G+ +G
Sbjct: 1558 HAPWFTASSYKGRVYESAAVGSVVLQVTALDKD-KGKNAEVLYSIESGN-IG-------- 1607
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F I P T K+ LDR + Y+L ++A DKG+PP
Sbjct: 1608 --NSFMIDPVLGSIKTAKE---------LDRS-NQVEYDLIVKATDKGSPP 1646
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N+PVF Y+A + EN P G+ VI ++A+DAD G NS++ YS+
Sbjct: 2805 NSPVFESSPYEAFIVENLPGGSRVIQIRASDAD-SGTNSQVMYSL 2848
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 56/114 (49%), Gaps = 10/114 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y ++EN+P+G V+ L D D +++ G+ F ++ +G
Sbjct: 3436 NAPVFSRGNYSVIIQENKPVGFSVLRLVVTDEDSSHNGPPFVFTIVTGNDEKAFEVNQQG 3495
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR---EIAPLGYNLTLRAVDKGTPP 112
++ T K+K++ ++ +K+ D +++ L Y + +R +++ P
Sbjct: 3496 ------VLLTASAIKRKEKDHFLLQVKVADNGKPQLSSLTY-IDIRVIEESIYP 3542
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 23/101 (22%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
Y+ V+E+ P GT+++ L+A D D + ++ YS+ G G F +D
Sbjct: 932 YRVKVREDLPEGTVIMWLEAHDPD-LAQSGQVRYSLM-DHGEGNFDVD------------ 977
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT+RA DKG P
Sbjct: 978 --------KLSGAVRIVQQLDFEKKQV-YNLTVRAKDKGKP 1009
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 47/108 (43%), Gaps = 27/108 (25%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NEGP 62
PVF Y A + EN + + V+ ++A P G+ K+ YS+ GD FTI+ N G
Sbjct: 2180 PVFEKPFYSAEIAENVQVHSPVVHVQANS--PEGL--KVFYSITDGDPFSQFTINFNTGV 2235
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGT 110
+N V+ LD E P Y L++RA D T
Sbjct: 2236 IN---------------------VIAPLDFEAHP-AYKLSIRATDSLT 2261
Score = 35.0 bits (79), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + Y A VK + +G ++ + A D D G N + Y ++ + YF I G
Sbjct: 2077 NAPVFVNLPYYAVVKVDTEVGRVIRHVTAVDRD-SGRNGDVHYYLK--EHHEYFQI---G 2130
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVL 87
PL + + + T KEY + V+
Sbjct: 2131 PLGEISL-KKQFELDTLNKEYLVTVV 2155
>gi|355749714|gb|EHH54113.1| hypothetical protein EGM_14874 [Macaca fascicularis]
Length = 4591
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 58/112 (51%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y A V E+ + VIT+ A DAD P NS I YS+ G+ G FTID
Sbjct: 3334 NAPVFSQDTYTAVVSEDAVLEQSVITVLADDADGPS-NSHIHYSIIDGNQGGPFTID--- 3389
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P + + + V KLLDRE GY LT++A D G+PPR
Sbjct: 3390 --------PVRGE---------VKVTKLLDRETIS-GYTLTVQASDNGSPPR 3423
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 58/116 (50%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVFS FV + VKE+ P+G+LV+T+ A D D G + +I YS+R G G+G F I E
Sbjct: 1029 LHPPVFSSFVERGAVKEDAPVGSLVMTVSAHDED-AGRDGEIRYSIRDGSGVGVFKIGEE 1087
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE + Y LT+ A D+G P ++
Sbjct: 1088 TGI--------------------IETSDRLDRE-STSHYWLTVFATDQGVVPLSSF 1122
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N +++Y + GGD LG F ++N
Sbjct: 2919 PRFTAEIYKGTVSEDDPPGGVIAILSTTDADSEEINRQVTYFITGGDPLGQFAVEN---- 2974
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE Y LT+ A D
Sbjct: 2975 --------------IQNEWKVYVKKPLDREKRD-NYLLTITATD 3003
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A EN PIGT V++L A D D G N ++YS+
Sbjct: 459 NPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPD-EGENGYVTYSITN------------- 504
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
LNH VP ID T + + LD E+ P Y L +RA D G P R
Sbjct: 505 -LNH---VPFVIDHFTGA----VSTSENLDYELMPRVYTLRIRASDWGLPYR 548
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 58/119 (48%), Gaps = 25/119 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP FS Y TV EN GTL+ ++A DAD G+N KI YS + D G F+I+
Sbjct: 3124 NAPEFSADPYAITVFENTEPGTLLTRVQATDAD-SGLNRKILYSLIDSAD--GQFSINEL 3180
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I + K LDRE+ + Y L+L+AVD+G P R T T
Sbjct: 3181 SGI--------------------IQLEKPLDRELQAV-YTLSLKAVDQGLPRRLTATGT 3218
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 53/111 (47%), Gaps = 20/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ Y AT+ E IGT V+ ++A DAD N ISY + G +
Sbjct: 2282 NAPVFAQQSYAATLSEASVIGTSVVQVRATDADSEP-NRGISYQLSGNLSKSH------- 2333
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+HF +D T I +L+ LD E + + + +RAVD G PP
Sbjct: 2334 --DHFH-----VDSSTGL----ISLLRTLDYEQSQR-HTIFVRAVDGGMPP 2372
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKENQP+G+ VI + + D D G N K+ Y++ GG+ F ID E +
Sbjct: 726 VKENQPVGSSVIFMNSTDLD-TGFNGKLVYAISGGNEDSCFMIDMETGM----------- 773
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ +L LDRE Y L + D G P + ++
Sbjct: 774 ---------LKILSPLDRETTD-KYTLNITVYDLGIPQKAAWR 806
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ +GT V+ + AA D N++I+YS+ G+ G F+ID+
Sbjct: 3229 NPPVFEYREYGATVSEDILVGTEVLQVYAASRDIEA-NAEITYSIISGNEHGKFSIDS-- 3285
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + Y LT+ A D GTP
Sbjct: 3286 ------------------KTGAVFIIENLDYE-SSHEYYLTIEATDGGTP 3316
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 10 VYQATVKENQPIGTLV-ITLKAADADPPGMNSKISYSVRGGDG-LGYFTIDNEGPLNHFR 67
V+ E P+ T V ++ D DP + +G +G + +I L FR
Sbjct: 245 VHIEQANECAPVITAVTLSPSELDRDPTYAIVTVDDCDQGANGEIASLSIVAGDLLQQFR 304
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
V + PG+K EY + + +D + P GYNLTL+A DKGTPP+
Sbjct: 305 TVRSF--PGSK--EYKVKAISGVDWDSHPFGYNLTLQAKDKGTPPQ 346
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P+F +Y+A + E+ P G V +KA DAD ++ K+ YS+ G+ +F ID+
Sbjct: 2389 NPPLFEQQIYEARISEHAPHGHFVTCVKAYDADSSDID-KLQYSILSGNDHKHFIIDS 2445
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 19/111 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ +G++V+ + A D D G N+++ YS+ G N G
Sbjct: 1558 HAPWFTASSYKGRVYESAAVGSVVLQVTALDKD-KGKNAEVLYSIESG------IFGNIG 1610
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F I P T K+ LDR + Y+L ++A DKG+PP
Sbjct: 1611 --NSFMIDPVLGSIKTAKE---------LDRS-NQVEYDLIVKATDKGSPP 1649
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N+PVF Y+A + EN P G+ VI ++A+DAD G NS++ YS+
Sbjct: 2808 NSPVFESSPYEAFIVENLPGGSRVIQIRASDAD-SGTNSQVMYSL 2851
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + Y A VK + +G ++ + A D D G N ++ Y ++ + YF I G
Sbjct: 2080 NAPVFVNLPYYAVVKVDTEVGRVIRHVTAVDRD-SGRNGEVHYYLK--EHHEYFQI---G 2133
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVL 87
PL + + +P T KEY + V+
Sbjct: 2134 PLGEISL-KKQFEPDTLNKEYLVTVV 2158
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 56/114 (49%), Gaps = 10/114 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y ++EN+P+G V+ L D D +++ G+ F ++ +G
Sbjct: 3439 NAPVFSRGNYSVIIQENKPVGFSVLRLVVTDEDSSHNGPPFVFTIVTGNDEKAFEVNQQG 3498
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR---EIAPLGYNLTLRAVDKGTPP 112
++ T K+K++ ++ +K+ D +++ L Y + +R +++ P
Sbjct: 3499 ------VLLTASAIKRKEKDHFLLQVKVADNGKPQLSSLTY-IDIRVIEESIYP 3545
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 23/101 (22%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
Y+ V+E+ P GT+++ L+A D D G + ++ YS+ G G F +D
Sbjct: 932 YRVKVREDLPEGTVIMWLEAHDPD-LGQSGQVRYSLM-DHGEGNFDVD------------ 977
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT+RA DKG P
Sbjct: 978 --------KLSGAVRIVQQLDFEKKQV-YNLTVRAKDKGKP 1009
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 47/108 (43%), Gaps = 27/108 (25%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NEGP 62
PVF Y A + EN + + V+ ++A P G+ K+ YS+ GD FTI+ N G
Sbjct: 2183 PVFEKPFYSAEIAENVQVHSPVVHVQANS--PEGL--KVFYSITDGDPFSQFTINFNTGV 2238
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGT 110
+N V+ LD E P Y L++RA D T
Sbjct: 2239 IN---------------------VIAPLDFEAHP-AYKLSIRATDSLT 2264
>gi|355687770|gb|EHH26354.1| hypothetical protein EGK_16302 [Macaca mulatta]
Length = 4591
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 58/112 (51%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y A V E+ + VIT+ A DAD P NS I YS+ G+ G FTID
Sbjct: 3334 NAPVFSQDTYTAVVSEDAVLEQSVITVLADDADGPS-NSHIHYSIIDGNQGGPFTID--- 3389
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P + + + V KLLDRE GY LT++A D G+PPR
Sbjct: 3390 --------PVRGE---------VKVTKLLDRETIS-GYTLTVQASDNGSPPR 3423
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 58/116 (50%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVFS FV + VKE+ P+G+LV+T+ A D D G + +I YS+R G G+G F I E
Sbjct: 1029 LHPPVFSSFVERGAVKEDAPVGSLVMTVSAHDED-AGRDGEIRYSIRDGSGVGVFKIGEE 1087
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE + Y LT+ A D+G P ++
Sbjct: 1088 TGI--------------------IETSDRLDRE-STSHYWLTVFATDQGVVPLSSF 1122
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N +++Y + GGD LG F ++N
Sbjct: 2919 PRFTAEIYKGTVSEDDPPGGVIAILSTTDADSEEINRQVTYFITGGDPLGQFAVEN---- 2974
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE Y LT+ A D
Sbjct: 2975 --------------IQNEWKVYVKKPLDREKRD-NYLLTITATD 3003
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A EN PIGT V++L A D D G N ++YS+
Sbjct: 459 NPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPD-EGENGYVTYSITN------------- 504
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
LNH VP ID T + + LD E+ P Y L +RA D G P R
Sbjct: 505 -LNH---VPFVIDHFTGA----VSTSENLDYELMPRVYTLRIRASDWGLPYR 548
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 58/119 (48%), Gaps = 25/119 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP FS Y TV EN GTL+ ++A DAD G+N KI YS + D G F+I+
Sbjct: 3124 NAPEFSADPYAITVFENTEPGTLLTRVQATDAD-SGLNRKILYSLIDSAD--GQFSINEL 3180
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I + K LDRE+ + Y L+L+AVD+G P R T T
Sbjct: 3181 SGI--------------------IQLEKPLDRELQAV-YTLSLKAVDQGLPRRLTATGT 3218
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKENQP+G+ VI + + D D G N K+ Y++ GG+ F ID E +
Sbjct: 726 VKENQPVGSSVIFMNSTDLD-TGFNGKLVYAISGGNEDSCFMIDMETGM----------- 773
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ +L LDRE Y L + D G P + ++
Sbjct: 774 ---------LKILSPLDRETTD-KYTLNITVYDLGIPQKAAWR 806
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ +GT V+ + AA D N++I+YS+ G+ G F+ID+
Sbjct: 3229 NPPVFEYREYGATVSEDILVGTEVLQVYAASRDIEA-NAEITYSIISGNEHGKFSIDS-- 3285
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + Y LT+ A D GTP
Sbjct: 3286 ------------------KTGAVFIIENLDYE-SSHEYYLTIEATDGGTP 3316
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 10 VYQATVKENQPIGTLV-ITLKAADADPPGMNSKISYSVRGGDG-LGYFTIDNEGPLNHFR 67
V+ E P+ T V ++ D DP + +G +G + +I L FR
Sbjct: 245 VHIEQANECAPVITAVTLSPSELDRDPTYAIVTVDDCDQGANGEIASLSIVAGDLLQQFR 304
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
V + PG+K EY + + +D + P GYNLTL+A DKGTPP+
Sbjct: 305 TVRSF--PGSK--EYKVKAISGVDWDSHPFGYNLTLQAKDKGTPPQ 346
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 20/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ Y AT+ E IGT V+ ++A D+D N ISY + G +
Sbjct: 2282 NAPVFAQQSYAATLSEASVIGTSVVQVRATDSDSEP-NRGISYQLFGNLSKSH------- 2333
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+HF +D T I +L+ LD E + + + +RAVD G PP
Sbjct: 2334 --DHFH-----VDSSTGL----ISLLRTLDYEQSQR-HTIFVRAVDGGMPP 2372
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P+F +Y+A + E+ P G V +KA DAD ++ K+ YS+ G+ +F ID+
Sbjct: 2389 NPPLFEQQIYEARISEHAPHGHFVTCVKAYDADSSDID-KLQYSILSGNDHKHFIIDS 2445
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 19/111 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ +G++V+ + A D D G N+++ YS+ G N G
Sbjct: 1558 HAPWFTASSYKGRVYESAAVGSVVLQVTALDKD-KGKNAEVLYSIESG------IFGNIG 1610
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F I P T K+ LDR + Y+L ++A DKG+PP
Sbjct: 1611 --NSFMIDPVLGSIKTAKE---------LDRS-NQVEYDLIVKATDKGSPP 1649
Score = 41.6 bits (96), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N+PVF Y+A + EN P G+ VI ++A+DAD G NS++ YS+
Sbjct: 2808 NSPVFESSPYEAFIVENLPGGSRVIQIRASDAD-SGTNSQVMYSL 2851
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 56/114 (49%), Gaps = 10/114 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y ++EN+P+G V+ L D D +++ G+ F ++ +G
Sbjct: 3439 NAPVFSRGNYSVIIQENKPVGFSVLRLVVTDEDSSHNGPPFVFTIVTGNDEKAFEVNQQG 3498
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR---EIAPLGYNLTLRAVDKGTPP 112
++ T K+K++ ++ +K+ D +++ L Y + +R +++ P
Sbjct: 3499 ------VLLTASAIKRKEKDHFLLQVKVADNGKPQLSSLTY-IDIRVIEESIYP 3545
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + Y A VK + +G ++ + A D D G N + Y ++ + YF I G
Sbjct: 2080 NAPVFVNLPYYAVVKVDTEVGRVIRHVTAVDRD-TGRNGDVHYYLK--EHHEYFQI---G 2133
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVL 87
PL + + +P T KEY + V+
Sbjct: 2134 PLGEISL-KKQFEPDTLNKEYLVTVV 2158
Score = 35.4 bits (80), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 23/101 (22%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
Y+ V+E+ P GT+++ L+A D D + ++ YS+ G G F +D
Sbjct: 932 YRVKVREDLPEGTVIMWLEAHDPD-LAQSGQVRYSLM-DHGEGNFDVD------------ 977
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT+RA DKG P
Sbjct: 978 --------KLSGAVRIVQQLDFEKKQV-YNLTVRAKDKGKP 1009
>gi|301769907|ref|XP_002920372.1| PREDICTED: protocadherin Fat 4-like [Ailuropoda melanoleuca]
gi|281339428|gb|EFB15012.1| hypothetical protein PANDA_009099 [Ailuropoda melanoleuca]
Length = 4980
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 57/118 (48%), Gaps = 23/118 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y ++ EN P+G+ V+ DAD G+NS+++YS+ GDGLG FT+D G
Sbjct: 1940 NPPIFSLSSYSTSLMENLPLGSTVLVFNVTDADD-GINSQLAYSIASGDGLGQFTVDKNG 1998
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
L VLK LDRE YNL ++ D P + +T
Sbjct: 1999 VLK---------------------VLKSLDRESQSF-YNLVVQVHDLPMLPASRFTST 2034
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+F+ VY+ + E P G+ V + A D D G+N+ + YS+ G+GLG+F I
Sbjct: 473 PIFAQQVYRVNLSEEAPPGSYVSGVSATDGDS-GLNANLRYSIVSGNGLGWFHIS----- 526
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T + G LDRE+A L + A D+G P+ +Y
Sbjct: 527 EHSGLVTTGVAGG-------------LDRELAS-QIVLNISARDQGVHPKFSY 565
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 51/108 (47%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+FS +Y + E P GT V + A D+D S+ SY + G+ G F+
Sbjct: 3402 PIFSLNIYSIQISEGVPTGTHVTFVSAFDSDSVPSWSRFSYFIGSGNENGAFS------- 3454
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I V LDRE P+ YNLT+ AVD GTP
Sbjct: 3455 ---------INPQTGQ----ITVTAELDRETLPI-YNLTVLAVDSGTP 3488
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF +Y+ + EN GT +I + AAD D G N ++ Y + G+ F ID+
Sbjct: 2150 NNPVFVQPLYKVEINENTLTGTDIIQVYAADGD-EGTNGQVRYGIVDGNANQEFRIDSVT 2208
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I V K LDRE P Y+LT++A D+G+ PR
Sbjct: 2209 GA--------------------ITVAKPLDREKTPT-YSLTVQAADRGSTPR 2239
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD P N IS + GG NE HF + +K
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSPAANGNISVQILGG---------NEQ--RHFEVQSSK 413
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK-GTPPRETYKA 118
+ P I V LDRE P YNLT+ D G PP +A
Sbjct: 414 V-PNLSL----IKVASALDRERIP-SYNLTVSVSDNYGAPPGAAVQA 454
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N+ I Y ++ +EG
Sbjct: 246 NPPVFGSSHYQAGVPEDAAVGSSVLQVAAADAD-EGTNADIRYRLQ-----------DEG 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P ++DP T I V + LD E A Y+LT++A+D+G P
Sbjct: 294 -------TPFQMDPETGL----ITVREPLDFE-ARRQYSLTVQAMDRGVP 331
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G N+ + YS+ G + G F+
Sbjct: 1311 NTPSFPKSTLFVDVLENMRIGELVSSVTATDSD-SGDNADLHYSITGTNNHGTFS----- 1364
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1365 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1402
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G VI A D+D G++ + SY + G+ G F +D
Sbjct: 131 NAPVFPDPSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIIQGNEAGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P R Y
Sbjct: 189 -----------ITLNPSGEGAFLHLVSKGGLDREVTP-QYQLLVEVEDKGEPKRRGY 233
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF Y TV EN P GT VI L A DAD G N+ I+Y+++ D F ID
Sbjct: 3190 NSPVFFPDEYFPTVLENAPSGTTVIHLNATDAD-SGTNAVIAYTIQSSDS-DLFVID 3244
Score = 42.0 bits (97), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A ++EN+P G+ + T+ A D D G+N I YS+ GD
Sbjct: 685 NSPVFYPIQYFAHIQENEPGGSYITTVSATDPD-LGLNGTIKYSISAGD 732
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y+ T+ E++P+ + ++A D D G N +I+YS+ G+ F I +G
Sbjct: 992 NPPVFDQLSYEVTLSESEPVNSRFFKVQAFDKD-SGANGEIAYSIAEGNTGDAFGIFPDG 1050
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D + + +VV DR + PL + + +
Sbjct: 1051 QL----YIKSELDRELQDRYVLLVVAS--DRAVEPLSATVNVTVI 1089
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 51/121 (42%), Gaps = 22/121 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS AT+ E+ IG +V T+ A D D MN ISYS+ G+ G F I++
Sbjct: 3085 HTPEFSQNHMSATIPESHGIGAIVRTVSARDRD-AAMNGLISYSISSGNEEGIFAINSST 3143
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ + + K LD E+ + +T+ A D G R Y +
Sbjct: 3144 GV--------------------LTLAKALDYELCQ-KHEMTISATDGGWVSRTGYCSVTV 3182
Query: 122 N 122
N
Sbjct: 3183 N 3183
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQAT+ E+ T V+ + A+D D G N I YSV G+ F ID+
Sbjct: 1206 NAPKFLKDFYQATISESAANLTQVLRVSASDVD-EGNNGLIHYSVMKGNEERQFAIDSTS 1264
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ ++ LD E P Y+L ++AVD G
Sbjct: 1265 G--------------------QVTLIGKLDYEATP-AYSLVIQAVDSG 1291
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 47/113 (41%), Gaps = 25/113 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y V +N +GT +I + A D G+NS++ Y + + G F +DN
Sbjct: 2979 NAPQFLKTKYFTPVTKNVKVGTKLIKVTAVDDRDFGLNSEVEYLISNENHFGKFKLDNST 3038
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYN--LTLRAVDKGTPP 112
I V LL I+ L N +T+ A DKG PP
Sbjct: 3039 GW--------------------ISVASLL---ISDLNQNFLITVTARDKGNPP 3068
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVFS Y V EN +G V ++ A+ D +NS ISY + GD G F I+
Sbjct: 789 NPPVFSQAAYSFVVFENVALGYHVGSVSASTMD---LNSNISYLITTGDQKGMFAIN 842
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 4 PVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
PVFS Y +V EN P GT ++ L+A D D G N + +S++ + E
Sbjct: 580 PVFSQPEGYDVSVVENAPTGTELLVLRATDRD-LGDNGTVRFSLQ----------EAETD 628
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
FR +DP + K + + LDRE Y+L + A D G+PP+ +
Sbjct: 629 QRSFR-----LDPVSGK----LSTIASLDREEQAF-YSLLVLATDLGSPPQSS 671
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 26/110 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ +Y T+ E+ P GT V+ + A+DAD + + +R G FT
Sbjct: 2360 NVPTFASKMYFTTIPEDAPTGTDVLLVNASDAD-----ASTNAVIRIIGGNSQFT----- 2409
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I+ LLDRE Y L + + D G+P
Sbjct: 2410 -----------INPSTGQ----IITSALLDRETKE-NYTLVVVSSDAGSP 2443
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 23/99 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL-NHFRIVPTK 72
++ EN PIGT VI++ A D D +N ++SY TI + P NHF I K
Sbjct: 1428 SIVENIPIGTSVISVTAHDPD-ADINGQLSY-----------TIIQQMPRGNHFGIDEVK 1475
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
GT I +DRE A L + LT++A D+ P
Sbjct: 1476 ---GT------IFTSAEIDREFANL-FELTVKANDQAVP 1504
>gi|297674808|ref|XP_002815402.1| PREDICTED: protocadherin Fat 1 [Pongo abelii]
Length = 4588
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 59/116 (50%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVFS FV + TVKE+ PIG+LV+T+ A D D G + +I YS+R G G+G F I E
Sbjct: 1029 LHPPVFSSFVEKGTVKEDAPIGSLVMTVSAHDED-AGRDGEIHYSIRDGSGVGVFKIGEE 1087
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE + Y LT+ A D+G P ++
Sbjct: 1088 TGV--------------------IETSDRLDRE-STSHYWLTVFATDQGVVPLSSF 1122
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 55/112 (49%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y + E+ + VIT+ A DAD P NS I YS+ G+ FTID
Sbjct: 3331 NTPVFSQDTYTTVISEDAVLEQSVITVMADDADGPS-NSHIHYSIVDGNQGSSFTID--- 3386
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P + + + V KLLDRE GY LT++A D G+PPR
Sbjct: 3387 --------PVRGE---------VKVTKLLDRETIS-GYTLTVQASDNGSPPR 3420
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N +++Y + GGD LG F ++N
Sbjct: 2916 PRFTAEIYKGTVSEDDPPGGVIAILSTTDADSEEINRQVTYFITGGDPLGQFAVEN---- 2971
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE Y LT+ A D
Sbjct: 2972 --------------IQNEWKVYVKKPLDREKRD-NYLLTITATD 3000
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A EN PIGT V++L A D D G N ++YS+
Sbjct: 459 NPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPD-EGENGYVTYSIAN------------- 504
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
LNH VP ID T + + LD E+ P Y L +RA D G P R
Sbjct: 505 -LNH---VPFAIDHFTGA----VSTSENLDYELMPRVYTLRIRASDWGLPYR 548
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 10 VYQATVKENQPIGTLV-ITLKAADADPPGMNSKISYSVRGGDG-LGYFTIDNEGPLNHFR 67
V+ E P+ T V ++ D DP + +G G + +I L FR
Sbjct: 245 VHIEQANECAPVITAVTLSPSELDRDPAYAIVTVDDCDQGASGDIASLSIVAGDLLQQFR 304
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
V + PG+K EY I + +D + P GYNLTL+A DKGTPPR
Sbjct: 305 TVRSF--PGSK--EYKIKAVGGIDWDSHPFGYNLTLQAKDKGTPPR 346
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKE+QP+G+ VI + + D D G N K+ Y+V GG+ F ID E +
Sbjct: 726 VKESQPVGSSVIFMNSTDLD-TGFNGKLVYAVSGGNEDSCFMIDMETGM----------- 773
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ +L LDRE A Y L + D G P + ++
Sbjct: 774 ---------LKILSPLDRETAD-KYTLNVTVYDLGIPQKAAWR 806
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 56/119 (47%), Gaps = 25/119 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP FS Y TV EN GTL+ +A DAD G+N KI YS + D G F+I+
Sbjct: 3121 NAPEFSVDPYAVTVFENTEPGTLLTRAQATDAD-TGLNRKILYSLIDSAD--GQFSINEL 3177
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I + K LDRE+ + Y L+L+AVD+G R T T
Sbjct: 3178 SGI--------------------IQLEKPLDRELQAV-YTLSLKAVDQGLLRRLTATGT 3215
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ +GT V+ + AA D N++I+YS+ G+ G F+ID+
Sbjct: 3226 NPPVFEYREYGATVSEDIVVGTEVLQVYAASRDIEA-NAEITYSIISGNEHGKFSIDS-- 3282
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + Y LT+ A D GTP
Sbjct: 3283 ------------------KTGAVFIIENLDYE-SSHEYYLTVEATDGGTP 3313
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P+F +Y+A + E+ P G V +KA DAD ++ K+ YS+ G +F ID+
Sbjct: 2386 NPPLFEQQIYEARISEHAPHGHFVTCVKAYDADSSDID-KLQYSILSGSDHKHFVIDS 2442
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ +G++V+ + A D D G N+++ YS+ G+ +G
Sbjct: 1558 HAPWFTASSYKGRVYESAAVGSVVLQVTALDKD-KGKNAEVLYSIESGN-IG-------- 1607
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F I P T K+ LDR + Y+L ++A DKG+PP
Sbjct: 1608 --NSFMIDPVLGSIKTAKE---------LDRN-NQVEYDLMVKATDKGSPP 1646
Score = 41.6 bits (96), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 20/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y AT+ E IGT V+ ++A D+D N ISY + G +
Sbjct: 2279 NPPVFAQQSYAATLSEASVIGTSVVQVRATDSDSEP-NRGISYQMFGNLSKSH------- 2330
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+HF +D T I +L+ LD E + + +RAVD G PP
Sbjct: 2331 --DHFH-----VDSSTGL----ISLLRTLDYE-QSRQHTIFVRAVDGGMPP 2369
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 16/128 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTID 58
N+PVF Y+A + EN P G+ VI ++A+DAD G N ++ YS+ + + + F I+
Sbjct: 2805 NSPVFESSPYEAFIVENLPGGSRVIQIRASDAD-SGTNGQVMYSLDQSQSVEVIESFAIN 2863
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTPPR- 113
E I K K+ Y I V+ E+ L ++T+ V+ +PPR
Sbjct: 2864 METGW----ITTLKELDHEKRDNYQIKVVASDHGEMIQLSSTAIVDVTVTDVND-SPPRF 2918
Query: 114 --ETYKAT 119
E YK T
Sbjct: 2919 TAEIYKGT 2926
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 56/114 (49%), Gaps = 10/114 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS Y ++EN+P+G V+ L D D +++ G+ F ++ +G
Sbjct: 3436 NAPIFSRGNYSVIIQENKPVGFSVLQLVVTDEDSSHNGPPFFFTIVTGNDEKAFEVNQQG 3495
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR---EIAPLGYNLTLRAVDKGTPP 112
++ T K+K++ ++ +K+ D +++ L Y + +R +++ P
Sbjct: 3496 ------VLLTSSAIKRKEKDHYLLQVKVADNGKPQLSSLTY-IDIRVIEESIYP 3542
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 23/101 (22%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
Y+ V+E+ P GT+++ L+A D D G + ++ YS+ G G F +D
Sbjct: 932 YRVKVREDLPEGTVIMWLEAQDPD-LGQSGQVRYSLM-DHGEGNFDVD------------ 977
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT+RA DKG P
Sbjct: 978 --------KLSGAVRIVQQLDFEKKQV-YNLTVRAKDKGKP 1009
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 27/108 (25%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NEGP 62
PVF Y A + EN + + V+ ++A P G+ K+ YS+ GD G FTI+ N G
Sbjct: 2180 PVFEKPFYSAEIAENIQVHSPVVHVQANS--PEGL--KVFYSITDGDPFGQFTINFNTGV 2235
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGT 110
+N V+ LD E P Y L++RA D T
Sbjct: 2236 IN---------------------VIAPLDFEAHP-AYKLSIRATDSLT 2261
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 21/114 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S+ VY + EN P V+ ++A D D N K+ Y + G+ G+F+I +
Sbjct: 1135 NAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSS-NDKLMYKITSGNPQGFFSIHPK- 1192
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
T + T +K LDRE + L + D G+PP+ T
Sbjct: 1193 ---------TGLITTTSRK---------LDREQQD-EHILEVTVTDNGSPPKST 1227
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + Y A VK + +G ++ + A D D G N ++ YS++ + +F I G
Sbjct: 2077 NAPVFVNLPYYAVVKVDTEVGHVIRYVTAVDRD-SGRNGEVHYSLK--EHHEHFQI---G 2130
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVL 87
PL + + + T KEY + V+
Sbjct: 2131 PLGEISL-KKQFELDTLNKEYLVTVV 2155
>gi|426345436|ref|XP_004040420.1| PREDICTED: protocadherin Fat 4 [Gorilla gorilla gorilla]
Length = 4981
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 57/120 (47%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y ++ EN P+G+ V+ DAD G+NS+++YS+ GD LG FT+D G
Sbjct: 1940 NPPVFSLNSYSTSLMENLPVGSTVLVFNVTDADD-GINSQLTYSIASGDSLGQFTVDKNG 1998
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L VLK LDRE YNL ++ D P + +T +
Sbjct: 1999 VLK---------------------VLKALDRESQSF-YNLVVQVHDLPQIPASRFTSTAQ 2036
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS VY+ + E P G+ V + A D D G+N+ + YS+ G+GLG+F I
Sbjct: 473 PVFSQQVYRVNLSEEAPPGSYVSGISATDGD-SGLNANLRYSIVSGNGLGWFHIS----- 526
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T G LDRE+A L + A D+G P+ +Y
Sbjct: 527 EHSGLVTTGSSGG-------------LDRELAS-QIVLNISARDQGVHPKVSY 565
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ +Y + E PIGT V + A D+D S+ SY + G+ G F+
Sbjct: 3402 PVFTLNIYSVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGTFS------- 3454
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I V LDRE P+ YNL++ AVD GTP
Sbjct: 3455 ---------INPQTGQ----ITVTAELDRETLPI-YNLSVLAVDSGTP 3488
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y+ + EN GT +I + AAD D G N ++ Y + G+ F ID+
Sbjct: 2150 NNPIFAQALYKVEINENTLTGTDIIQVFAADGD-EGTNGQVRYGIVNGNTNQEFRIDSVT 2208
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I V K LDRE P Y+LT++A D+G+ PR
Sbjct: 2209 GA--------------------ITVAKPLDREKTPT-YHLTVQATDRGSTPR 2239
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD P N IS + GG NE HF + +K
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSPAANGNISVQILGG---------NEQ--RHFEVQSSK 413
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK-GTPPRETYKA 118
+ P I V LDRE P YNLT+ D G PP +A
Sbjct: 414 V-PNLSL----IKVASALDRERIP-SYNLTVSVSDNYGAPPGAAVQA 454
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N+ I Y ++ +EG
Sbjct: 246 NPPVFGSSHYQAGVPEDAVVGSSVLQVAAADAD-EGTNADIRYRLQ-----------DEG 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P ++DP T I V + LD E A Y+LT++A+D+G P
Sbjct: 294 -------TPFQMDPETGL----ITVREPLDFE-ARRQYSLTVQAMDRGVP 331
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF Y TV EN P GT VI L A DAD G N+ I+Y+V+ D F ID
Sbjct: 3190 NSPVFLSDDYFPTVLENAPSGTTVIHLNATDAD-SGTNAVIAYTVQSSDS-DLFVID 3244
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF Y+ T+ E++P+ + ++A+D D G N +I+Y++ G+ F I +G
Sbjct: 992 NSPVFDQLSYEVTLSESEPVNSRFFKVQASDKD-SGANGEIAYTIAEGNTGDAFGIFPDG 1050
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D + + +VV DR + PL + + +
Sbjct: 1051 QL----YIKSELDRELQDRYVLMVVAS--DRAVEPLSATVNVTVI 1089
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQAT+ E+ T V+ + A+D D G N I YS+ G+ F ID+
Sbjct: 1206 NAPKFLKDFYQATISESAANLTQVLRVSASDVD-EGNNGLIHYSIIKGNEERQFAIDSTS 1264
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ ++ LD E P Y+L ++AVD GT P
Sbjct: 1265 G--------------------QVALIGKLDYEATP-AYSLVIQAVDSGTIP 1294
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G N+ + YS+ G + G F+
Sbjct: 1311 NTPSFPKSTLFVDVLENMRIGELVSSVTATDSD-SGDNADLYYSITGTNNHGTFS----- 1364
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1365 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1402
Score = 42.0 bits (97), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G VI A D+D G++ + SY + G+ G F +D
Sbjct: 131 NAPVFPDPSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIIRGNEAGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P R Y
Sbjct: 189 -----------ITLNPSGEGAFLHLVSKGGLDREVTP-QYQLLVEVEDKGEPKRRGY 233
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 22/121 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS AT+ E+ +G++V T+ A D D MN I YS+ G+ G F I++
Sbjct: 3085 HTPEFSQSHMSATIPESHSVGSIVRTVSARDRD-AAMNGLIKYSISSGNEEGIFAINSST 3143
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ + + K LD E+ + +T+ A+D G R Y +
Sbjct: 3144 GI--------------------LTLAKALDYELCQ-KHEMTISAIDGGWVARTGYCSVTV 3182
Query: 122 N 122
N
Sbjct: 3183 N 3183
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A +KEN+P G+ + T+ A D D G N + YS+ GD
Sbjct: 685 NSPVFYPVQYFAHIKENEPGGSYITTVSATDPD-LGTNGTVKYSISAGD 732
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP F Y V +N +GT +I + A D G+NS++ Y + + LG F +DN+
Sbjct: 2979 NAPQFLKSKYFTPVTKNVKVGTKLIRVTAIDDKDFGLNSEVEYFISNDNHLGKFKLDND 3037
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVFS Y V EN +G V ++ A+ D +NS ISY + GD G F I+
Sbjct: 789 NPPVFSQVAYSFVVFENVALGYHVGSVSASTMD---LNSNISYLITTGDQKGMFAIN 842
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 4 PVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
PVFS Y +V EN P GT ++ L+A D D G N + +S++ + E
Sbjct: 580 PVFSQPEGYDVSVVENAPTGTELLMLRATDGD-LGDNGTVRFSLQ----------EAETD 628
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
FR +DP + + + + LDRE Y+L + A D G+PP+ +
Sbjct: 629 RRSFR-----LDPVSGR----LSTISSLDREEQAF-YSLLVLATDLGSPPQSS 671
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 23/99 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL-NHFRIVPTK 72
++ EN PIGT VI++ A D D +N ++SY TI + P NHF I K
Sbjct: 1428 SIVENIPIGTSVISVTAHDPD-ADINGQLSY-----------TIIQQMPRGNHFTIDEVK 1475
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
GT I +DRE A L + LT++A D+ P
Sbjct: 1476 ---GT------IYTNAEIDREFANL-FELTVKANDQAVP 1504
>gi|410956898|ref|XP_003985073.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Felis catus]
Length = 4915
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 57/118 (48%), Gaps = 23/118 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y ++ EN P+G+ V+ DAD G+NS+++YS+ GD LG FT+D G
Sbjct: 1908 NPPIFSLNSYSTSLMENLPLGSTVLVFNVTDADD-GINSQLAYSIASGDSLGQFTVDKNG 1966
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
L VLK LDRE YNL ++A D P + +T
Sbjct: 1967 VLK---------------------VLKSLDRESQSF-YNLVVQAHDLPQLPASRFTST 2002
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ VY+ + E P G+ V + A D D G+N+ + YS+ G+GLG+F I
Sbjct: 473 PVFAQQVYRVNLSEEAPPGSYVSGVSATDGDS-GLNANLRYSIVSGNGLGWFHIS----- 526
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T + G LDRE+A L + A D+G P+ +Y
Sbjct: 527 EHSGLVTTGVAGG-------------LDRELAS-QIVLNISARDQGVHPKFSY 565
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 51/108 (47%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+FS +Y + E P GT V + A D+D S+ SY + G+ G F+
Sbjct: 3372 PIFSLNIYSVQISEGVPTGTHVTFVSAFDSDSVPSWSRFSYFIGSGNENGAFS------- 3424
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I V LDRE P+ YNLT+ A+D GTP
Sbjct: 3425 ---------INPQTGQ----ITVTAELDRETLPV-YNLTVLAIDSGTP 3458
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF +Y+ + EN GT +I + AAD D G N ++ Y + G+ F ID+
Sbjct: 2118 NNPVFVQALYKVEINENTLTGTDIIQVYAADGD-EGTNGQVRYGIVDGNANQEFRIDSVT 2176
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I V K LDRE P Y+LT++A D+G+ PR
Sbjct: 2177 GA--------------------ITVAKPLDREKTPT-YSLTVQATDRGSNPR 2207
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD P N IS + GG NE HF + +K
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSPAANGNISVQILGG---------NEQ--RHFEVQSSK 413
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK-GTPPRETYKA 118
+ P I V LDRE P YNLT+ D G PP +A
Sbjct: 414 V-PNLSL----IKVASALDRERIP-SYNLTVSVSDNYGAPPGAAVQA 454
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N+ I Y ++ +EG
Sbjct: 246 NPPVFGSSHYQAGVPEDAAVGSSVLQVAAADAD-EGTNADIRYRLQ-----------DEG 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P ++DP T I V + LD E A Y+LT++A+D+G P
Sbjct: 294 -------TPFQMDPETGL----ITVREPLDFE-ARRQYSLTVQAMDRGVP 331
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ +Y T+ E+ P GT V+ + A+DAD N+ ISY + GG+ FT
Sbjct: 2328 NVPTFASKMYFTTIPEDAPTGTDVLLVNASDAD-ASTNAVISYRIIGGN--SQFT----- 2379
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I+ LLDRE Y L + + D G+P
Sbjct: 2380 -----------INPSTGQ----IITSALLDRETKE-NYTLVVVSSDAGSP 2413
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G N+ + YS+ G + G F+
Sbjct: 1311 NTPSFPKSTLFVDVLENMRIGELVSSVTATDSD-SGDNADLHYSITGTNNHGTFS----- 1364
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1365 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1402
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF Y TV EN P GT VI L A DAD G N+ I+Y+V+ D F ID
Sbjct: 3160 NSPVFFPDEYFPTVLENAPSGTTVIHLNATDAD-SGTNAVIAYTVQSSDS-DLFVID 3214
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G VI A D+D G++ + SY + G+ G F +D
Sbjct: 131 NAPVFPDPSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIIQGNEAGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P R Y
Sbjct: 189 -----------ITLNPSGEGAFLHLVSKGGLDREVTP-QYQLLVEVEDKGEPKRRGY 233
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y+ T+ E++P+ + ++A D D G N +I+YS+ G+ F I +G
Sbjct: 992 NPPVFDQLSYEVTLSESEPVNSRFFKVQAFDKD-SGANGEIAYSIAEGNTGDAFGIFPDG 1050
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D + + +VV DR + PL + + +
Sbjct: 1051 QL----YIKSELDRELQDRYVLLVVAS--DRAVEPLSATVNVTVI 1089
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A ++EN+P G+ + T+ A D D G+N + YS+ GD
Sbjct: 685 NSPVFYPVQYFAHIQENEPGGSYITTVSATDPD-LGLNGTVKYSISAGD 732
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQAT+ E+ T V+ + A+D D G N I YSV G+ F ID+
Sbjct: 1206 NAPKFLKDFYQATISESAANLTQVLRVSASDVD-EGNNGLIHYSVMKGNEERQFAIDSTS 1264
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ ++ LD E P Y+L ++AVD G
Sbjct: 1265 G--------------------QVTLIGKLDYEATP-AYSLVIQAVDSG 1291
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 50/121 (41%), Gaps = 22/121 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS AT+ E+ IG +V T+ A D D MN I YS+ G+ G F I++
Sbjct: 3055 HTPEFSQSHMSATIPESHSIGAIVRTVSARDRD-AAMNGLIRYSISSGNEEGIFAINSST 3113
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ + + K LD E+ + +T+ A D G R Y +
Sbjct: 3114 GI--------------------LTLAKALDYELCQ-KHEMTITATDGGWVARTGYCSVTV 3152
Query: 122 N 122
N
Sbjct: 3153 N 3153
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVFS Y V EN +G V ++ A+ D +N+ ISY + GD G F I+
Sbjct: 789 NPPVFSQAAYSFVVFENVALGYHVGSVSASTMD---LNANISYLITTGDQKGMFAIN 842
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAP F Y V +N +GT +I + A D G+NS++ Y + + G F +DN
Sbjct: 2949 NAPQFLKGKYFTPVTKNVKVGTKLIKVTAVDDRDFGLNSEVEYLISNENHFGKFKLDN 3006
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 4 PVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
PVFS Y +V EN P GT ++ L+A D D G N + +S++ + E
Sbjct: 580 PVFSQPEGYDVSVVENAPTGTELLVLRATDRD-LGDNGTVRFSLQ----------EAETD 628
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
FR +DP + + + + LDRE Y+L + A D G+PP+ +
Sbjct: 629 QRSFR-----LDPVSGR----LSTVTSLDREEQAF-YSLLVLATDLGSPPQSS 671
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF + TV+EN G+ ++ L A DAD G N+ ++Y++ G F ID E
Sbjct: 1704 NPPVFPTDMLDLTVEENIGDGSKIMQLTAMDAD-EGANALVTYTIISG-ADDSFRIDPES 1761
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
++ TK ++ +Y+++V + + + N+T+ V+ TP
Sbjct: 1762 G----DLIATKRLDRERRSKYSLLVRADDGLQSSDMRINITVSDVNDHTP 1807
>gi|2281025|dbj|BAA21568.1| cadherin [Homo sapiens]
Length = 140
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVFS FV + TVKE+ P+G+LV+T+ A D D G + +I YS+R G G+G F I E
Sbjct: 37 LHPPVFSSFVEKGTVKEDAPVGSLVMTVSAHDED-AGRDGEIRYSIRDGSGVGVFKIGEE 95
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE + Y LT+ A D+G P ++
Sbjct: 96 TGV--------------------IETSDRLDRE-STSHYWLTVFATDQGVVPLSSF 130
>gi|397490949|ref|XP_003816443.1| PREDICTED: protocadherin Fat 4 [Pan paniscus]
Length = 4981
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y ++ EN P+G+ V+ DAD G+NS+++YS+ GD LG FT+D G
Sbjct: 1940 NPPIFSLNSYSTSLMENLPVGSTVLVFNVTDADD-GINSQLTYSIASGDSLGQFTVDKNG 1998
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L VLK LDRE YNL ++ D P + +T +
Sbjct: 1999 VLK---------------------VLKALDRESQSF-YNLVVQVHDLPQIPASRFTSTAQ 2036
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS VY+ + E P G+ V + A D D G+N+ + YS+ G+GLG+F I
Sbjct: 473 PVFSQQVYRVNLSEEAPPGSYVSGISATDGD-SGLNANLRYSIVSGNGLGWFHIS----- 526
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T G LDRE+A L + A D+G P+ +Y
Sbjct: 527 EHSGLVTTGSSGG-------------LDRELAS-QIVLNISARDQGVHPKVSY 565
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ VY + E PIGT V + A D+D S+ SY + G+ G F+
Sbjct: 3402 PVFTLNVYSVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGAFS------- 3454
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I V LDRE P+ YNL++ AVD GTP
Sbjct: 3455 ---------INPQTGQ----ITVTAELDRETLPI-YNLSVLAVDSGTP 3488
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y+ + EN GT +I + AAD D G N ++ Y + G+ F ID+
Sbjct: 2150 NNPIFAQALYKVEINENTLTGTDIIQVFAADGD-EGTNGQVRYGIVNGNTNQEFRIDSVT 2208
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I V K LDRE P Y+LT++A D+G+ PR
Sbjct: 2209 GA--------------------ITVAKPLDREKTPT-YHLTVQATDRGSTPR 2239
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD P N IS + GG NE HF + +K
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSPAANGNISVQILGG---------NEQ--RHFEVQSSK 413
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK-GTPPRETYKA 118
+ P I V LDRE P YNLT+ D G PP +A
Sbjct: 414 V-PNLSL----IKVASALDRERIP-SYNLTVSVSDNYGAPPGAAVQA 454
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N+ I Y ++ +EG
Sbjct: 246 NPPVFGSSHYQAGVPEDAVVGSSVLQVAAADAD-EGTNADIRYRLQ-----------DEG 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P ++DP T I V + LD E A Y+LT++A+D+G P
Sbjct: 294 -------TPFQMDPETGL----ITVREPLDFE-ARRQYSLTVQAMDRGVP 331
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF Y TV EN P GT VI L A DAD G N+ I+Y+V+ D F ID
Sbjct: 3190 NSPVFLSDDYFPTVLENAPSGTTVIHLNATDAD-SGTNAVIAYTVQSSDS-DLFVID 3244
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF Y+ T+ E++P+ + ++A+D D G N +I+Y++ G+ F I +G
Sbjct: 992 NSPVFDQLSYEVTLSESEPVNSRFFKVQASDKD-SGANGEIAYTIAEGNTGDAFGIFPDG 1050
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D + + +VV DR + PL + + +
Sbjct: 1051 QL----YIKSELDRELQDRYVLMVVAS--DRAVEPLSATVNVTVI 1089
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQAT+ E+ T V+ + A+D D G N I YS+ G+ F ID+
Sbjct: 1206 NAPKFLKDFYQATISESAANLTQVLRVSASDVD-EGNNGLIHYSIIKGNEERQFAIDSTS 1264
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ ++ LD E P Y+L ++AVD GT P
Sbjct: 1265 G--------------------QVALIGKLDYEATP-AYSLVIQAVDSGTIP 1294
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G N+ + YS+ G + G F+
Sbjct: 1311 NTPSFPKSTLFVDVLENMRIGELVSSVTATDSD-SGDNADLYYSITGTNNHGTFS----- 1364
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1365 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1402
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G VI A D+D G++ + SY + G+ G F +D
Sbjct: 131 NAPVFPDPSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIIRGNEAGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P R Y
Sbjct: 189 -----------ITLNPSGEGAFLHLVSKGGLDREVTP-QYQLLVEVEDKGEPKRRGY 233
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 22/121 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS AT+ E+ +G++V T+ A D D MN I YS+ G+ G F I++
Sbjct: 3085 HTPEFSQSHMSATIPESHSVGSIVRTVSARDRD-AAMNGLIKYSISSGNEEGIFAINSST 3143
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ + + K LD E+ + +T+ A+D G R Y +
Sbjct: 3144 GI--------------------LTLAKALDYELCQ-KHEMTISAIDGGWVARTGYCSVTV 3182
Query: 122 N 122
N
Sbjct: 3183 N 3183
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A +KEN+P G+ + T+ A D D G N + YS+ GD
Sbjct: 685 NSPVFYPVQYFAHIKENEPGGSYITTVSATDPD-LGTNGTVKYSISAGD 732
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP F Y V +N +GT +I + A D G+NS++ Y + + LG F +DN+
Sbjct: 2979 NAPQFLKSKYFTPVTKNVKVGTKLIRVTAIDDKDFGLNSEVEYFISNDNHLGKFKLDND 3037
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVFS Y V EN +G V ++ A+ D +NS ISY + GD G F I+
Sbjct: 789 NPPVFSQVAYSFVVFENVALGYHVGSVSASTMD---LNSNISYLITTGDQKGMFAIN 842
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 4 PVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
PVFS Y +V EN P GT ++ L+A D D G N + +S++ + E
Sbjct: 580 PVFSQPEGYDVSVVENAPTGTELLMLRATDGD-LGDNGTVRFSLQ----------EAETD 628
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
FR +DP + + + + LDRE Y+L + A D G+PP+ +
Sbjct: 629 RRSFR-----LDPVSGR----LSTISSLDREEQAF-YSLLVLATDLGSPPQSS 671
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 23/99 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL-NHFRIVPTK 72
++ EN PIGT VI++ A D D +N ++SY TI + P NHF I K
Sbjct: 1428 SIVENIPIGTSVISVTAHDPD-ADINGQLSY-----------TIIQQMPRGNHFTIDEVK 1475
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
GT I +DRE A L + LT++A D+ P
Sbjct: 1476 ---GT------IYTNAEIDREFANL-FELTVKANDQAVP 1504
>gi|296195619|ref|XP_002745420.1| PREDICTED: protocadherin Fat 4 [Callithrix jacchus]
Length = 4981
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y ++ EN P+G+ V+ DAD G+NS+++YS+ GD LG FT+D G
Sbjct: 1940 NPPIFSLNSYSTSLMENLPVGSTVLVFNVTDADD-GINSQLAYSIASGDSLGQFTVDKNG 1998
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L VLK LDRE YNL ++ D P + +T +
Sbjct: 1999 VLK---------------------VLKALDRESQSF-YNLVVQVHDLPQIPASRFTSTAQ 2036
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS VY+ + E P G+ V + A D D G+N+ + YS+ G+GLG+F I
Sbjct: 473 PVFSQQVYRVNLSEEAPPGSYVSGVSATDGD-SGLNANLRYSIVSGNGLGWFHIS----- 526
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T G LDRE+A L + A D+G P+ +Y
Sbjct: 527 EHSGLVTTGAAGG-------------LDRELAS-QIVLNISARDQGVHPKVSY 565
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ +Y + E PIGT V + A D+D S+ SY + G+ G F+
Sbjct: 3402 PVFTLNIYSVQISEGVPIGTHVTFVSAFDSDSILSWSRFSYFIGSGNENGAFS------- 3454
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I V LDRE P+ YNL++ AVD GTP
Sbjct: 3455 ---------INPQTGQ----ITVTAELDRETLPI-YNLSVLAVDSGTP 3488
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y+ + EN GT +I + AAD D G N ++ Y + G+ F +D+
Sbjct: 2150 NNPIFAQALYKVEINENTLTGTDIIQVFAADGD-EGTNGQVRYGIVNGNTNQEFRLDSVT 2208
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I V K LDRE P Y+LT++A D+G+ PR
Sbjct: 2209 GA--------------------ITVAKPLDREKTPT-YHLTVQATDRGSTPR 2239
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD P N IS + GG NE HF + +K
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSPAANGNISVQILGG---------NEQ--RHFEVQSSK 413
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK-GTPPRETYKA 118
+ P I V LDRE P YNLT+ D G PP +A
Sbjct: 414 V-PNLSL----IKVASALDRERIP-SYNLTVSVSDNYGAPPAAAVQA 454
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N+ I Y ++ +EG
Sbjct: 246 NPPVFGSSHYQAGVPEDTVVGSSVLQVAAADAD-EGTNADIRYRLQ-----------DEG 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P ++DP T I V + LD E A Y+LT++A+D+G P
Sbjct: 294 -------TPFQMDPETGL----ITVREPLDFE-ARRQYSLTVQAMDRGVP 331
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF Y TV EN P GT VI L A DAD G N+ I+Y+V+ D F ID
Sbjct: 3190 NSPVFLSDDYFPTVLENAPSGTTVIHLNATDAD-SGTNAVIAYTVQSSDS-DLFVID 3244
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF Y+ T+ E++P+ + ++A+D D G N +I+Y++ G+ F I +G
Sbjct: 992 NSPVFDQLSYEVTLSESEPVNSRFFKVQASDKD-SGANGEIAYTIAEGNTGDAFGIFPDG 1050
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D + + +VV DR + PL + + +
Sbjct: 1051 QL----YIKSELDRELQDRYVLMVVAS--DRAVEPLSATVNVTVI 1089
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G N+ + YS+ G + G F+
Sbjct: 1311 NTPSFPKTTLFVDVLENMRIGELVSSVTATDSD-SGDNADLHYSITGTNNHGTFS----- 1364
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1365 -----------ISPNTG----SIFLAKKLDFETKSL-YKLNITAKDQGRPPRSS 1402
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G VI A D+D G++ + SY + G+ G F +D
Sbjct: 131 NAPVFPDPSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIIRGNEAGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P R Y
Sbjct: 189 -----------ITLNPSGEGAFLHLVSKGGLDREVTP-QYQLLVEVEDKGEPKRRGY 233
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 22/109 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQAT+ E+ T V+ + A+D D G N I YS+ G+ F ID+
Sbjct: 1206 NAPKFLKDFYQATISESAANLTQVLRVSASDVD-EGNNGLIHYSIIKGNEERQFAIDSTS 1264
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGT 110
+ ++ LD E P Y+L + AVD GT
Sbjct: 1265 G--------------------QVALIGKLDYEATP-AYSLVIEAVDSGT 1292
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A +KEN+P G+ + T+ A D D G N + YS+ GD
Sbjct: 685 NSPVFYPVQYFAHIKENEPGGSYITTVSATDPD-LGTNGTVKYSISAGD 732
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 22/121 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS AT+ E+ IG++V T+ A D D MN I YS+ G+ G F I++
Sbjct: 3085 HTPEFSQSHMSATIPESHSIGSIVRTVSARDRD-TAMNGLIKYSISSGNEEGIFAINSST 3143
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ + + K LD E+ + +T+ A D G R Y +
Sbjct: 3144 GV--------------------LTLAKALDYELCQ-KHEMTISATDGGWVARTGYCSVTV 3182
Query: 122 N 122
N
Sbjct: 3183 N 3183
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP F Y V +N +GT +I + A D G+NS++ Y + + LG F +DN+
Sbjct: 2979 NAPQFLKIKYFTPVTKNVEVGTKLIKVTAIDDKDFGLNSEVEYFISNDNHLGKFKLDND 3037
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVFS Y V EN +G V ++ A+ D +NS I+Y + GD G F I+
Sbjct: 789 NPPVFSQVAYSFVVFENMALGYHVGSVSASTMD---LNSNITYLITTGDQKGMFAIN 842
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 4 PVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
PVFS Y +V EN P GT ++ L+A D D G N + +S++ + E
Sbjct: 580 PVFSQPEGYDVSVVENAPTGTELLVLRATDGD-LGDNGTVRFSLQ----------EAETD 628
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
FR +DP + + + + LDRE Y+L + A D G+PP+ +
Sbjct: 629 RRSFR-----LDPVSGR----LSTISSLDREDQAF-YSLLVLATDMGSPPQSS 671
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 23/99 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL-NHFRIVPTK 72
++ EN PIGT VI++ A D D +N ++SY TI + P NHF I K
Sbjct: 1428 SIVENIPIGTSVISVTAHDPD-ADINGQLSY-----------TIIQQMPRGNHFTIDEVK 1475
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
GT I +DRE A L + LT++A D+ P
Sbjct: 1476 ---GT------IYTNAEIDREFANL-FELTVKANDQAVP 1504
>gi|301623209|ref|XP_002940912.1| PREDICTED: protocadherin Fat 1-like isoform 2 [Xenopus (Silurana)
tropicalis]
Length = 4570
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P+FS+FV + +++E+ PIGT V+T+ A D D G + +I YS+R G G+G FTI E
Sbjct: 998 LHTPLFSEFVSKGSIREDVPIGTPVMTVSAHDED-TGRDGEIRYSIRDGSGVGVFTIHEE 1056
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
GT + N LDRE Y LT+ A D+G P ++
Sbjct: 1057 --------------KGTIRTADN------LDRETTS-HYWLTVYATDRGVVPLSSF 1091
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 56/112 (50%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVFS Y V E+ G V+ + A DAD P +N+ I YS+ G+
Sbjct: 3300 NSPVFSQNTYTTVVGEDSVSGQSVLMVVADDADGP-LNNHIRYSITEGN----------- 3347
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P N F I P + + + V KLLDRE+ GY LT++A D G PPR
Sbjct: 3348 PGNTFIIDPVRGE---------VKVNKLLDRELIS-GYTLTIQAEDNGQPPR 3389
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 63/124 (50%), Gaps = 20/124 (16%)
Query: 10 VYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-------RGGDG-LGYFTIDNEG 61
+Y E+ P+ + A P ++ ++Y++ +G +G + +I
Sbjct: 214 IYVEQANEHAPV------ISAVRLTHPELDKDLTYAIVTVDDNDQGPNGEIASLSIIAGD 267
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
PL F+ T+ PG+K EY IV +K + E+ P GYNLTL+A DKG+PP+ + AT
Sbjct: 268 PLQLFKT--TRTSPGSK--EYKIVAVKETEWEMQPFGYNLTLQAKDKGSPPQ--FSATKV 321
Query: 122 NGLT 125
LT
Sbjct: 322 IHLT 325
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ +Y+ TV E+ P ++ L D D +N ++++ + GGD LG F I+N
Sbjct: 2883 NPPRFTAEIYKGTVSEDDPPDGVIAILSTTDNDTEEINKEVTFHITGGDPLGQFAIEN-- 2940
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE+ Y L + A D
Sbjct: 2941 ----------------MQHEWKVYVRKPLDREVKD-NYLLNITATD 2969
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 50/113 (44%), Gaps = 22/113 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+N P F+ Y+A V EN PIG+ V ++ A D D G +G ++I N
Sbjct: 427 INTPEFTQTSYKAVVDENSPIGSSVFSVHAVDHD------------EGENGFITYSIANI 474
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P P ID + I L+ LD E+ P Y L +RA D G P R
Sbjct: 475 NPQ------PFAIDAFSGV----ITTLEDLDYELMPRIYTLKIRASDWGLPYR 517
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y +++ E+ P+GT V+ + A D +N++I+Y + G+ G FT
Sbjct: 3195 NPPVFEHREYGSSLTEDAPVGTEVLQVYATSRDIE-VNAEITYKIISGNEHGKFT----- 3248
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I+P T I ++ LD E +P Y LT+ A D GTPP
Sbjct: 3249 -----------INPVTGM----IFIIASLDYETSP-EYYLTVEATDGGTPP 3283
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS Y TV EN T ++ ++A DAD G+N K+ YS+ G F+ID
Sbjct: 3090 NAPEFSADPYTVTVYENTEPQTPLLRVQAIDAD-LGLNHKVQYSLVSS-AEGQFSIDELS 3147
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I + K LDRE+ + Y LT++A D+G P +
Sbjct: 3148 GI--------------------ISLEKPLDRELQAV-YTLTVKATDQGLPRK 3178
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ +G+ V+ + A D D G N+++ YS+ G+ FTID
Sbjct: 1527 HAPWFTSSFYEGRVYESAAVGSAVLQVSALDKD-KGKNAEVGYSIESGNTANAFTID--- 1582
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+ I+ T K LDR Y L ++A D G PP
Sbjct: 1583 PV--LGIIKTA---------------KELDRNNHGR-YELVVKATDHGIPP 1615
Score = 42.4 bits (98), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
+KEN P+G +I ++A D D G + K+ Y++ GG+ F +D E
Sbjct: 695 IKENVPVGANIIHMEANDLD-AGFSGKLLYAISGGNDDSCFAVDMETGW----------- 742
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPRNGL 124
+ +L LDRE+ YNL + D G P + +++ N L
Sbjct: 743 ---------LKILSPLDRELKD-QYNLNITVYDLGIPQKSSWRLLDVNVL 782
Score = 40.0 bits (92), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 17/93 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL----GYFTI 57
NAPVF Y+A + EN P GT V+ ++A D D G N ++SY + L F++
Sbjct: 2774 NAPVFDSNPYKAFIVENLPEGTKVVQVRAFDLD-VGSNGQVSYMLGHSQDLEEIKELFSV 2832
Query: 58 DNE-------GPLNH-----FRIVPTKIDPGTK 78
D E G L+H + IV D G K
Sbjct: 2833 DRETGWVTTLGELDHEKTNKYHIVVVAYDHGDK 2865
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 46/113 (40%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N PVF + Y AT+ E IGT V+ + A D D G N+ IS+ + G+ YF ID
Sbjct: 2248 NPPVFREKTYAATLSEASVIGTSVVQINAKDPD-SGQNNAISFHLVETSGNISQYFHIDA 2306
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L I K LD E L +RA D G PP
Sbjct: 2307 SSGL--------------------IETAKPLDYEYFQ-ECTLVVRATDNGIPP 2338
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y V+E+ P+GT++ L A D D G++ ++ +S+ +G G F +D
Sbjct: 892 NPPVFIPSNYHVKVREDLPVGTVITWLDAYDPD-VGLSGQVRFSLL-ENGDGKFEVD--- 946
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT RA D+G P
Sbjct: 947 -----------------KVSGAVRIIQELDFEEKQV-YNLTARAKDRGKP 978
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+++P F Y+ + EN P+ TLV LKA D D G+ +++Y + F I+
Sbjct: 2456 LHSPKFGQNEYEVELSENSPVQTLVTELKAVDED-KGLYGQLTYHIINDFAKDNFNINER 2514
Query: 61 GPL 63
G L
Sbjct: 2515 GQL 2517
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 7/110 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N P+F + TV ++ +G + T+ A DAD + + Y + GD L FT++ N
Sbjct: 534 NIPLFEKVNCEGTVPKDLGVGEQITTVSAIDADELQL---VKYRIESGDELDLFTLNPNS 590
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIA-PLGYNLTLRAVDKG 109
G L+ + P P K Y++ + +A P+ N+T+ + KG
Sbjct: 591 GVLSLKQ--PLSEGPANKVSFYSLRITATDGENLAQPIYINITVTSSRKG 638
>gi|332820147|ref|XP_526682.3| PREDICTED: protocadherin Fat 4 isoform 2 [Pan troglodytes]
Length = 4981
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y ++ EN P+G+ V+ DAD G+NS+++YS+ GD LG FT+D G
Sbjct: 1940 NPPIFSLNSYSTSLMENLPVGSTVLVFNVTDADD-GINSQLTYSIASGDSLGQFTVDKNG 1998
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L VLK LDRE YNL ++ D P + +T +
Sbjct: 1999 VLK---------------------VLKALDRESQSF-YNLVVQVHDLPQIPASRFTSTAQ 2036
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS VY+ + E P G+ V + A D D G+N+ + YS+ G+GLG+F I
Sbjct: 473 PVFSQQVYRVNLSEEAPPGSYVSGISATDGD-SGLNANLRYSIVSGNGLGWFHIS----- 526
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T G LDRE+A L + A D+G P+ +Y
Sbjct: 527 EHSGLVTTGSSGG-------------LDRELAS-QIVLNISARDQGVHPKVSY 565
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ VY + E PIGT V + A D+D S+ SY + G+ G F+
Sbjct: 3402 PVFTLNVYSVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGAFS------- 3454
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I V LDRE P+ YNL++ AVD GTP
Sbjct: 3455 ---------INPQTGQ----ITVTAELDRETLPI-YNLSVLAVDSGTP 3488
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y+ + EN GT +I + AAD D G N ++ Y + G+ F ID+
Sbjct: 2150 NNPIFAQALYKVEINENTLTGTDIIQVFAADGD-EGTNGQVRYGIVNGNTNQEFRIDSVT 2208
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I V K LDRE P Y+LT++A D+G+ PR
Sbjct: 2209 GA--------------------ITVAKPLDREKTPT-YHLTVQATDRGSTPR 2239
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 46/101 (45%), Gaps = 18/101 (17%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD P N IS + GG NE HF + +K
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSPAANGNISVQILGG---------NEQ--RHFEVQSSK 413
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK-GTPP 112
+ P I V LDRE P YNLT+ D G PP
Sbjct: 414 V-PNLSL----IKVASALDRERIP-SYNLTVSVSDNYGAPP 448
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N+ I Y ++ +EG
Sbjct: 246 NPPVFGSSHYQAGVPEDAVVGSSVLQVAAADAD-EGTNADIRYRLQ-----------DEG 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P ++DP T I V + LD E A Y+LT++A+D+G P
Sbjct: 294 -------TPFQMDPETGL----ITVREPLDFE-ARRQYSLTVQAMDRGVP 331
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF Y TV EN P GT VI L A DAD G N+ I+Y+V+ D F ID
Sbjct: 3190 NSPVFLSDDYFPTVLENAPSGTTVIHLNATDAD-SGTNAVIAYTVQSSDS-DLFVID 3244
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF Y+ T+ E++P+ + ++A+D D G N +I+Y++ G+ F I +G
Sbjct: 992 NSPVFDQLSYEVTLSESEPVNSRFFKVQASDKD-SGANGEIAYTIAEGNTGDAFGIFPDG 1050
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D + + +VV DR + PL + + +
Sbjct: 1051 QL----YIKSELDRELQDRYVLMVVAS--DRAVEPLSATVNVTVI 1089
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQAT+ E+ T V+ + A+D D G N I YS+ G+ F ID+
Sbjct: 1206 NAPKFLKDFYQATISESAANLTQVLRVSASDVD-EGNNGLIHYSIVKGNEERQFAIDSTS 1264
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ ++ LD E P Y+L ++AVD GT P
Sbjct: 1265 G--------------------QVALIGKLDYEATP-AYSLVIQAVDSGTIP 1294
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G N+ + YS+ G + G F+
Sbjct: 1311 NTPSFPKSTLFVDVLENMRIGELVSSVTATDSD-SGDNADLYYSITGTNNHGTFS----- 1364
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1365 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1402
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G VI A D+D G++ + SY + G+ G F +D
Sbjct: 131 NAPVFPDPSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIIRGNEAGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P R Y
Sbjct: 189 -----------ITLNPSGEGAFLHLVSKGGLDREVTP-QYQLLVEVEDKGEPKRRGY 233
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 22/121 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS AT+ E+ +G++V T+ A D D MN I YS+ G+ G F I++
Sbjct: 3085 HTPEFSQSHMSATIPESHSVGSIVRTVSARDRD-AAMNGLIKYSISSGNEEGIFAINSST 3143
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ + + K LD E+ + +T+ A+D G R Y +
Sbjct: 3144 GI--------------------LTLAKALDYELCQ-KHEMTISAIDGGWVARTGYCSVTV 3182
Query: 122 N 122
N
Sbjct: 3183 N 3183
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A +KEN+P G+ + T+ A D D G N + YS+ GD
Sbjct: 685 NSPVFYPVQYFAHIKENEPGGSYITTVSATDPD-LGTNGTVKYSISAGD 732
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP F Y V +N +GT +I + A D G+NS++ Y + + LG F +DN+
Sbjct: 2979 NAPQFLKSKYFTPVTKNVKVGTKLIRVTAIDDKDFGLNSEVEYFISNDNHLGKFKLDND 3037
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVFS Y V EN +G V ++ A+ D +NS ISY + GD G F I+
Sbjct: 789 NPPVFSQVAYSFVVFENVALGYHVGSVSASTMD---LNSNISYLITTGDQKGMFAIN 842
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 4 PVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
PVFS Y +V EN P GT ++ L+A D D G N + +S++ + E
Sbjct: 580 PVFSQPEGYDVSVVENAPTGTELLMLRATDGD-LGDNGTVRFSLQ----------EAETD 628
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
FR +DP + + + + LDRE Y+L + A D G+PP+ +
Sbjct: 629 RRSFR-----LDPVSGR----LSTISSLDREEQAF-YSLLVLATDLGSPPQSS 671
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 23/99 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL-NHFRIVPTK 72
++ EN PIGT VI++ A D D +N ++SY TI + P NHF I K
Sbjct: 1428 SIVENIPIGTSVISVTAHDPD-ADINGQLSY-----------TIIQQMPRGNHFTIDEVK 1475
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
GT I +DRE A L + LT++A D+ P
Sbjct: 1476 ---GT------IYTNAEIDREFANL-FELTVKANDQAVP 1504
>gi|440903408|gb|ELR54072.1| Protocadherin Fat 1 [Bos grunniens mutus]
Length = 4588
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 58/114 (50%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y A V E+ + VIT+ A DAD P NS I Y++ G N+G
Sbjct: 3331 NAPVFSQDTYTAVVSEDAVLEQSVITVMADDADGPS-NSHIHYAIIDG---------NQG 3380
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
P IDP + + V KLLDRE GY LT++A D G+PPR T
Sbjct: 3381 S-------PFTIDPARGE----VKVTKLLDRETIS-GYTLTVQASDNGSPPRVT 3422
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVF FV + VKEN P+G+ V+ + A D D G + +I YS+R G G+G F ID E
Sbjct: 1029 LHPPVFPSFVEKGAVKENAPLGSSVMKVSARDED-MGRDGEIHYSIRDGSGVGVFRIDEE 1087
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE + Y LT+ A D+G P ++
Sbjct: 1088 TGV--------------------IETSDRLDRE-STSHYWLTVYASDQGVVPLSSF 1122
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 57/118 (48%), Gaps = 23/118 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS Y TV EN GTL+ ++A DAD G+N KISYS+ G F+I+
Sbjct: 3121 NAPEFSADPYTITVFENTEPGTLLTRVQATDAD-AGLNRKISYSLLNS-ADGQFSINELS 3178
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I + K LDRE+ + Y LTL+AVD G P R T T
Sbjct: 3179 GI--------------------IQLEKPLDRELQAV-YTLTLKAVDHGLPRRLTATGT 3215
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ + DAD +N +++Y + GGD LG F I+N
Sbjct: 2916 PRFTAEIYKGTVSEDDPPGGVIAIVSTTDADSEEINRQVTYYITGGDPLGQFAIEN---- 2971
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE Y LT+ A D
Sbjct: 2972 --------------IQNEWKVYVKKPLDREERD-SYLLTITATD 3000
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 47/110 (42%), Gaps = 22/110 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ Y+A+ EN PIGT V+++ A D D G N ++YS+ L
Sbjct: 461 PEFTQTAYKASFDENVPIGTTVMSVSAVDPD-EGENGYVTYSIAN--------------L 505
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
NH V E LD E+ P Y L +RA D G+P R
Sbjct: 506 NHVPFVINHFTGAVSTSEN-------LDYELMPRVYTLRIRASDWGSPYR 548
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ IGT V+ + AA D N++I+YS+ G+ G F+ID+
Sbjct: 3226 NPPVFEYREYGATVSEDILIGTEVLQVYAASRDIEA-NAEITYSIISGNEHGKFSIDS-- 3282
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I +++ LD E + Y LT+ A D G+P
Sbjct: 3283 ------------------KTGAIFIIENLDYE-SSHEYYLTVEATDGGSP 3313
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ +G++V+ + A D D G N+++ YS+ G+ FTID
Sbjct: 1558 HAPWFTSSSYEGRVYESAAVGSVVLQVTALDKD-KGKNAEVLYSIESGNIGNSFTID--- 1613
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+ +I + LDR + Y+L ++A DKG PP
Sbjct: 1614 PILG-----------------SIKTARELDRS-NQVAYDLMVKATDKGDPP 1646
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKENQP+G+ ++ + A D D G N K+ Y+V GG+ F +D E +
Sbjct: 726 VKENQPVGSSLLVMNATDLD-TGFNGKLVYAVSGGNEDSCFIMDMETGM----------- 773
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ +L LDRE Y L + D G P R +
Sbjct: 774 ---------LKILSPLDRETTDR-YTLNITVSDLGLPQRAAWH 806
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 20/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y T+ E IGT V+ ++A DAD N ISY + G +
Sbjct: 2279 NPPVFAQQSYATTLSEASVIGTSVVQVRATDADSEP-NRGISYHMVGNHSKSH------- 2330
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+HF +D GT I +++ LD E + +++RAVD G PP
Sbjct: 2331 --DHFH-----VDSGTGL----ISLVRTLDYE-QFRQHQISVRAVDGGMPP 2369
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
L FR V + PG++ EY + +D + P GYNLTL+A DKGTPP+
Sbjct: 300 LQQFRTV--RSSPGSR--EYKLKATGAIDWDSHPFGYNLTLQAKDKGTPPQ 346
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 10/114 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y ++EN+P+G V+ L D D +S+ G+ G F ++ +G
Sbjct: 3436 NAPVFSRENYSLIIQENKPMGFSVLQLVVTDRDSSHNGPPFFFSIVSGNEEGAFEVNQQG 3495
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR---EIAPLGYNLTLRAVDKGTPP 112
L + K+ K++ ++ +K+ D +++ L Y + +R +++ P
Sbjct: 3496 ALLTAATINRKV------KDHYLLHVKVADNGKPQLSSLTY-IDIRVIEESVYP 3542
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 23/101 (22%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
Y+ V+E+ P GT+++ L+A D D G +S++ YS+ G G F +D
Sbjct: 932 YRVKVREDLPEGTIIMWLEAHDPD-LGQSSQVRYSLL-DHGEGNFDVD------------ 977
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT+RA DKG P
Sbjct: 978 --------KLSGAVRIIQQLDFEKKQV-YNLTVRAKDKGKP 1009
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F ++ + N P GT VI + A+DAD G N+ I+Y++ D+E
Sbjct: 2592 NAPQFRATKFEVNIGSNAPKGTSVIKVLASDAD-EGSNADITYAIEA---------DSES 2641
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I TK+ L L+ E+ + +RAVD G+P RE+
Sbjct: 2642 VKENLEINRASGVITTKES------LIGLENEV----FTFFVRAVDNGSPQRES 2685
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + Y A VK + +G ++ + A D D G N ++ YS++ + +F I + G
Sbjct: 2077 NAPVFVNLPYYALVKVDAAVGQVIRHVTAVDRD-SGRNGEVHYSLK--ERHEHFQIGSSG 2133
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVL 87
++ + +P T KEY I V+
Sbjct: 2134 EIS----LKKPFEPDTLNKEYLITVV 2155
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 21/114 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S+ VY + EN P V+ ++A D D + K++Y + G+ G+F+I+++
Sbjct: 1135 NAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSS-DDKLTYKITSGNPQGFFSINSK- 1192
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
T + T +K LDRE + L + D G+PP+ T
Sbjct: 1193 ---------TGLITTTARK---------LDREQQD-EHILEVTVTDNGSPPKST 1227
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 18/129 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTID 58
N+PV Y+A + EN P G+ VI ++A+D D G N ++ Y++ + D + F ++
Sbjct: 2805 NSPVLESSPYEAFIVENLPAGSRVIQIRASDLD-SGSNGQVMYNLDQSQSVDVIESFAVN 2863
Query: 59 NE-GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTPPR 113
E G + R + + K+ Y I V+ E L ++T+ V+ +PPR
Sbjct: 2864 METGWITTLRELDHE-----KRDSYQIKVVASDHGEKVQLSSTAIVDVTVTDVND-SPPR 2917
Query: 114 ---ETYKAT 119
E YK T
Sbjct: 2918 FTAEIYKGT 2926
>gi|410220660|gb|JAA07549.1| FAT tumor suppressor homolog 4 [Pan troglodytes]
gi|410307816|gb|JAA32508.1| FAT tumor suppressor homolog 4 [Pan troglodytes]
Length = 4983
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y ++ EN P+G+ V+ DAD G+NS+++YS+ GD LG FT+D G
Sbjct: 1940 NPPIFSLNSYSTSLMENLPVGSTVLVFNVTDADD-GINSQLTYSIASGDSLGQFTVDKNG 1998
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L VLK LDRE YNL ++ D P + +T +
Sbjct: 1999 VLK---------------------VLKALDRESQSF-YNLVVQVHDLPQIPASRFTSTAQ 2036
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS VY+ + E P G+ V + A D D G+N+ + YS+ G+GLG+F I
Sbjct: 473 PVFSQQVYRVNLSEEAPPGSYVSGISATDGD-SGLNANLRYSIVSGNGLGWFHIS----- 526
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T G LDRE+A L + A D+G P+ +Y
Sbjct: 527 EHSGLVTTGSSGG-------------LDRELAS-QIVLNISARDQGVHPKVSY 565
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ VY + E PIGT V + A D+D S+ SY + G+ G F+
Sbjct: 3404 PVFTLNVYSVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGAFS------- 3456
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I V LDRE P+ YNL++ AVD GTP
Sbjct: 3457 ---------INPQTGQ----ITVTAELDRETLPI-YNLSVLAVDSGTP 3490
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y+ + EN GT +I + AAD D G N ++ Y + G+ F ID+
Sbjct: 2150 NNPIFAQALYKVEINENTLTGTDIIQVFAADGD-EGTNGQVRYGIVNGNTNQEFRIDSVT 2208
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I V K LDRE P Y+LT++A D+G+ PR
Sbjct: 2209 GA--------------------ITVAKPLDREKTPT-YHLTVQATDRGSTPR 2239
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 46/101 (45%), Gaps = 18/101 (17%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD P N IS + GG NE HF + +K
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSPAANGNISVQILGG---------NEQ--RHFEVQSSK 413
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK-GTPP 112
+ P I V LDRE P YNLT+ D G PP
Sbjct: 414 V-PNLSL----IKVASALDRERIP-SYNLTVSVSDNYGAPP 448
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N+ I Y ++ +EG
Sbjct: 246 NPPVFGSSHYQAGVPEDAVVGSSVLQVAAADAD-EGTNADIRYRLQ-----------DEG 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P ++DP T I V + LD E A Y+LT++A+D+G P
Sbjct: 294 -------TPFQMDPETGL----ITVREPLDFE-ARRQYSLTVQAMDRGVP 331
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF Y TV EN P GT VI L A DAD G N+ I+Y+V+ D F ID
Sbjct: 3192 NSPVFLSDDYFPTVLENAPSGTTVIHLNATDAD-SGTNAVIAYTVQSSDS-DLFVID 3246
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y T+ E+ P GT V+ + A+DAD N+ ISY + GG+ FT
Sbjct: 2360 NVPTFASKAYFTTIPEDAPTGTDVLLVNASDAD-ASTNAVISYRIIGGN--SQFT----- 2411
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I+ LLDRE Y L + D G+P
Sbjct: 2412 -----------INPSTGQ----IITSALLDRETKD-NYTLVVVCSDAGSP 2445
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF Y+ T+ E++P+ + ++A+D D G N +I+Y++ G+ F I +G
Sbjct: 992 NSPVFDQLSYEVTLSESEPVNSRFFKVQASDKD-SGANGEIAYTIAEGNTGDAFGIFPDG 1050
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D + + +VV DR + PL + + +
Sbjct: 1051 QL----YIKSELDRELQDRYVLMVVAS--DRAVEPLSATVNVTVI 1089
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQAT+ E+ T V+ + A+D D G N I YS+ G+ F ID+
Sbjct: 1206 NAPKFLKDFYQATISESAANLTQVLRVSASDVD-EGNNGLIHYSIVKGNEERQFAIDSTS 1264
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ ++ LD E P Y+L ++AVD GT P
Sbjct: 1265 G--------------------QVALIGKLDYEATP-AYSLVIQAVDSGTIP 1294
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G N+ + YS+ G + G F+
Sbjct: 1311 NTPSFPKSTLFVDVLENMRIGELVSSVTATDSD-SGDNADLYYSITGTNNHGTFS----- 1364
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1365 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1402
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G VI A D+D G++ + SY + G+ G F +D
Sbjct: 131 NAPVFPDPSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIIRGNEAGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P R Y
Sbjct: 189 -----------ITLNPSGEGAFLHLVSKGGLDREVTP-QYQLLVEVEDKGEPKRRGY 233
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 22/121 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS AT+ E+ +G++V T+ A D D MN I YS+ G+ G F I++
Sbjct: 3087 HTPEFSQSHMSATIPESHSVGSIVRTVSARDRD-AAMNGLIKYSISSGNEEGIFAINSST 3145
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ + + K LD E+ + +T+ A+D G R Y +
Sbjct: 3146 GI--------------------LTLAKALDYELCQ-KHEMTISAIDGGWVARTGYCSVTV 3184
Query: 122 N 122
N
Sbjct: 3185 N 3185
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A +KEN+P G+ + T+ A D D G N + YS+ GD
Sbjct: 685 NSPVFYPVQYFAHIKENEPGGSYITTVSATDPD-LGTNGTVKYSISAGD 732
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP F Y V +N +GT +I + A D G+NS++ Y + + LG F +DN+
Sbjct: 2981 NAPQFLKSKYFTPVTKNVKVGTKLIRVTAIDDKDFGLNSEVEYFISNDNHLGKFKLDND 3039
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVFS Y V EN +G V ++ A+ D +NS ISY + GD G F I+
Sbjct: 789 NPPVFSQVAYSFVVFENVALGYHVGSVSASTMD---LNSNISYLITTGDQKGMFAIN 842
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 4 PVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
PVFS Y +V EN P GT ++ L+A D D G N + +S++ + E
Sbjct: 580 PVFSQPEGYDVSVVENAPTGTELLMLRATDGD-LGDNGTVRFSLQ----------EAETD 628
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
FR +DP + + + + LDRE Y+L + A D G+PP+ +
Sbjct: 629 RRSFR-----LDPVSGR----LSTISSLDREEQAF-YSLLVLATDLGSPPQSS 671
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 23/99 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL-NHFRIVPTK 72
++ EN PIGT VI++ A D D +N ++SY TI + P NHF I K
Sbjct: 1428 SIVENIPIGTSVISVTAHDPD-ADINGQLSY-----------TIIQQMPRGNHFTIDEVK 1475
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
GT I +DRE A L + LT++A D+ P
Sbjct: 1476 ---GT------IYTNAEIDREFANL-FELTVKANDQAVP 1504
>gi|300794923|ref|NP_001179921.1| protocadherin Fat 1 precursor [Bos taurus]
Length = 4588
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 58/114 (50%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y A V E+ + VIT+ A DAD P NS I Y++ G N+G
Sbjct: 3331 NAPVFSQDTYTAVVSEDAVLEQSVITVMADDADGPS-NSHIHYAIIDG---------NQG 3380
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
P IDP + + V KLLDRE GY LT++A D G+PPR T
Sbjct: 3381 S-------PFTIDPARGE----VKVTKLLDRETIS-GYTLTVQASDNGSPPRVT 3422
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVF FV + VKEN P+G+ V+ + A D D G + +I YS+R G G+G F ID E
Sbjct: 1029 LHPPVFPSFVEKGAVKENAPLGSSVMKVSARDED-MGRDGEIHYSIRDGSGVGVFRIDEE 1087
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE + Y LT+ A D+G P ++
Sbjct: 1088 TGV--------------------IETSDRLDRE-STSHYWLTVYASDQGVVPLSSF 1122
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 57/118 (48%), Gaps = 23/118 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS Y TV EN GTL+ ++A DAD G+N KISYS+ G F+I+
Sbjct: 3121 NAPEFSADPYTITVFENTEPGTLLTRVQATDAD-AGLNRKISYSLLNS-ADGQFSINELS 3178
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I + K LDRE+ + Y LTL+AVD G P R T T
Sbjct: 3179 GI--------------------IQLEKPLDRELQAV-YTLTLKAVDHGLPRRLTATGT 3215
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ + DAD +N +++Y + GGD LG F I+N
Sbjct: 2916 PRFTAEIYKGTVSEDDPPGGVIAIVSTTDADSEEINRQVTYYITGGDPLGQFAIEN---- 2971
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE Y LT+ A D
Sbjct: 2972 --------------IQNEWKVYVKKPLDREERD-SYLLTITATD 3000
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 47/110 (42%), Gaps = 22/110 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ Y+A+ EN PIGT V+++ A D D G N ++YS+ L
Sbjct: 461 PEFTQTAYKASFDENVPIGTTVMSVSAVDPD-EGENGYVTYSIAN--------------L 505
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
NH V E LD E+ P Y L +RA D G+P R
Sbjct: 506 NHVPFVINHFTGAVSTSEN-------LDYELMPRVYTLRIRASDWGSPYR 548
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ IGT V+ + AA D N++I+YS+ G+ G F+ID+
Sbjct: 3226 NPPVFEYREYGATVSEDILIGTEVLQVYAASRDIEA-NAEITYSIISGNEHGKFSIDS-- 3282
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I +++ LD E + Y LT+ A D GTP
Sbjct: 3283 ------------------KTGAIFIIENLDYE-SSHEYYLTVEATDGGTP 3313
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKENQP+G+ ++ + A D D G N K+ Y+V GG+ F +D E +
Sbjct: 726 VKENQPVGSSLLVMNATDLD-TGFNGKLVYAVSGGNEDSCFIMDMETGM----------- 773
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ +L LDRE Y L + D G P R +
Sbjct: 774 ---------LKILSPLDRETTDR-YTLNITVSDLGLPQRAAWH 806
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 20/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y T+ E IGT V+ ++A DAD N ISY + G +
Sbjct: 2279 NPPVFAQQSYATTLSEASVIGTSVVQVRATDADSEP-NRGISYHMVGNHSKSH------- 2330
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+HF +D GT I +++ LD E + +++RAVD G PP
Sbjct: 2331 --DHFH-----VDSGTGL----ISLVRTLDYE-QFRQHQISVRAVDGGMPP 2369
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
L FR V + PG++ EY + +D + P GYNLTL+A DKGTPP+
Sbjct: 300 LQQFRTV--RSSPGSR--EYKLKATGAIDWDSHPFGYNLTLQAKDKGTPPQ 346
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ +G++V+ + A D D G N+++ YS+ G+ FTID
Sbjct: 1558 HAPWFTSSSYEGRVYESAAVGSVVLQVTALDKD-KGKNAEVLYSIESGNIGNSFTID--- 1613
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+ +I + LDR + Y+L ++A D+G PP
Sbjct: 1614 PILG-----------------SIKTARELDRS-NQVAYDLMVKATDRGDPP 1646
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 10/114 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y ++EN+P+G V+ L D D +S+ G+ G F ++ +G
Sbjct: 3436 NAPVFSRGNYSLIIQENKPVGFSVLQLVVTDRDSSHNGPPFFFSIVSGNEEGAFEVNQQG 3495
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR---EIAPLGYNLTLRAVDKGTPP 112
L + K+ K++ ++ +K+ D +++ L Y + +R +++ P
Sbjct: 3496 ALLTAAAINRKV------KDHYLLHVKVADNGKPQLSSLTY-IDIRVIEESVYP 3542
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 23/101 (22%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
Y+ V+E+ P GT+++ L+A D D G +S++ YS+ G G F +D
Sbjct: 932 YRVKVREDLPEGTIIMWLEAHDPD-LGQSSQVRYSLL-DHGEGNFDVD------------ 977
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT+RA DKG P
Sbjct: 978 --------KLSGAVRIIQQLDFEKKQV-YNLTVRAKDKGKP 1009
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 21/114 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S+ VY + EN P V+ ++A D D + K++Y + G+ G+F+I+++
Sbjct: 1135 NAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSS-DDKLTYKITSGNPQGFFSINSK- 1192
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
T + T +K LDRE + L + D G+PP+ T
Sbjct: 1193 ---------TGLITTTARK---------LDREQQD-EHILEVTVTDNGSPPKST 1227
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F ++ + + P GT VI + A+DAD G N+ I+Y++ D+E
Sbjct: 2592 NAPQFRATKFEVNIGSSAPKGTSVIKVLASDAD-EGSNADITYAIEA---------DSES 2641
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I TK+ L L+ E+ + +RAVD G+P RE+
Sbjct: 2642 VKENLEINRASGVITTKES------LIGLENEV----FTFFVRAVDNGSPQRES 2685
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + Y A VK + +G ++ + A D D G N ++ Y ++ + +F I + G
Sbjct: 2077 NAPVFVNLPYYALVKVDAAVGQVIRHVTAVDRD-SGRNGEVHYFLK--ERHEHFQIGSSG 2133
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVL 87
++ + +P T KEY I V+
Sbjct: 2134 EIS----LKKPFEPDTLNKEYLITVV 2155
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 18/129 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTID 58
N+PV Y+A + EN P G+ VI ++A+D D G N ++ Y++ + D + F ++
Sbjct: 2805 NSPVLESSPYEAFIVENLPAGSRVIQIRASDLD-SGSNGQVMYNLDQSQSVDVIESFAVN 2863
Query: 59 NE-GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTPPR 113
E G + R + + K+ Y I V+ E L ++T+ V+ +PPR
Sbjct: 2864 METGWITTLRELDHE-----KRDSYQIKVVASDHGEKVQLSSTAIVDVTVTDVND-SPPR 2917
Query: 114 ---ETYKAT 119
E YK T
Sbjct: 2918 FTAEIYKGT 2926
>gi|402870407|ref|XP_003899216.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Papio anubis]
Length = 4928
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y ++ EN P+G+ V+ DAD G+NS+++YS+ GD LG FT+D G
Sbjct: 1940 NPPIFSLNSYSTSLMENLPVGSTVLVFNVTDADD-GINSQLAYSIASGDSLGQFTVDKNG 1998
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L VLK LDRE YNL ++ D P + +T +
Sbjct: 1999 VLK---------------------VLKALDRESQSF-YNLVVQVHDLPQIPASRFTSTAQ 2036
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS VY+ + E P G+ V + A D D G+N+ + YS+ G+GLG+F I
Sbjct: 473 PVFSQQVYRVNLSEEAPPGSYVSGISATDGD-SGLNANLRYSIVSGNGLGWFHIS----- 526
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T G LDRE+A L + A D+G P+ +Y
Sbjct: 527 EHSGLVTTGAAGG-------------LDRELAS-QIVLNISARDQGVHPKVSY 565
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ +Y + E PIGT V + A D+D S+ SY + G+ G F+
Sbjct: 3402 PVFTLNIYSVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGAFS------- 3454
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I V LDRE P+ YNL++ AVD GTP
Sbjct: 3455 ---------INPQTGQ----ITVTAELDRETLPI-YNLSVLAVDSGTP 3488
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y+ + EN GT +I + AAD D G N ++ Y + G+ F ID+
Sbjct: 2150 NNPIFAQTLYKVEINENTLTGTDIIQVFAADGD-EGTNGQVRYGIVNGNTNQEFRIDSVT 2208
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I V K LDRE P Y+LT++A D+G+ PR
Sbjct: 2209 GA--------------------ITVAKPLDREKTPT-YHLTVQAADRGSTPR 2239
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N+ I Y ++ +EG
Sbjct: 246 NPPVFGSSHYQAGVPEDAVVGSSVLQVAAADAD-EGTNADIRYRLQ-----------DEG 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P ++DP T I V + LD E A Y+LT++A+D+G P
Sbjct: 294 -------TPFQMDPETGL----ITVREPLDFE-ARRQYSLTVQAMDRGVP 331
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 47/107 (43%), Gaps = 18/107 (16%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD N IS + GG NE HF + +K
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSSAANGNISVQILGG---------NEQ--RHFEVQSSK 413
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK-GTPPRETYKA 118
+ P I V LDRE P YNLT+ D G PP +A
Sbjct: 414 V-PNLSL----IKVASALDRERIP-SYNLTVSVSDNYGAPPGAAVQA 454
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF Y TV EN P GT VI L A DAD G N+ I+Y+V+ D F ID
Sbjct: 3190 NSPVFLSDDYFPTVLENAPSGTTVIHLNATDAD-SGTNAVIAYTVQSSDS-DLFVID 3244
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF Y+ T+ E++P+ + ++A+D D G N +I+Y++ G+ F I +G
Sbjct: 992 NSPVFDQLSYEVTLSESEPVNSRFFKVQASDKD-SGANGEIAYTIAEGNTGDAFGIFPDG 1050
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D + + +VV DR + PL + + +
Sbjct: 1051 QL----YIKSELDRELQDRYVLMVVAS--DRAVEPLSATVNVTVI 1089
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 50/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQAT+ E+ T V+ + A+D D G N I YS+ G+ F ID
Sbjct: 1206 NAPKFLKDFYQATISESAANLTQVLRVSASDVD-EGNNGLIHYSIIKGNEERQFAID--- 1261
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I G + ++ LD E P Y+L ++AVD GT P
Sbjct: 1262 -----------ITSG------QVALIGKLDYEATP-AYSLVIQAVDSGTIP 1294
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G N+ + YS+ G + G F+
Sbjct: 1311 NTPSFPKSTLFVDVLENMRIGELVSSVTATDSD-SGDNADLYYSITGTNNHGTFS----- 1364
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1365 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1402
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 22/121 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS AT+ E+ IG++V T+ A D D MN I YS+ G+ G F I++
Sbjct: 3085 HTPEFSQSHMSATIPESHSIGSIVRTVSARDRD-AAMNGLIKYSISSGNEEGIFAINSST 3143
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ + + K LD E+ + +T+ A+D G R Y +
Sbjct: 3144 GI--------------------LTLAKALDYELCQ-KHEMTISAIDGGWVARTGYCSVTV 3182
Query: 122 N 122
N
Sbjct: 3183 N 3183
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G VI A D+D G++ + SY + G+ G F +D
Sbjct: 131 NAPVFPDPSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIIRGNEAGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P R Y
Sbjct: 189 -----------ITLNPSGEGAFLHLVSKGGLDREVTP-QYQLLVEVEDKGEPKRRGY 233
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A +KEN+P G+ + T+ A D D G N + YS+ GD
Sbjct: 685 NSPVFYPVQYFAHIKENEPGGSYITTVSATDPD-LGTNGTVKYSISAGD 732
Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVFS Y V EN +G V ++ A+ D +NS ISY + GD G F I+
Sbjct: 789 NPPVFSQVAYSFVVFENVALGYHVGSVSASTMD---LNSNISYLITTGDQKGMFAIN 842
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP F Y V +N +GT +I + A D G+NS++ Y + + LG F +DN+
Sbjct: 2979 NAPQFLKSKYFTPVTKNVKVGTKLIKVIAIDDKDFGLNSEVEYFISNDNHLGKFKLDND 3037
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 4 PVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
PVFS Y +V EN P GT ++ L+A D D G N + +S++ + E
Sbjct: 580 PVFSQPEGYDVSVVENAPTGTELLMLRATDGD-LGDNGTVRFSLQ----------EAETD 628
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
FR +DP + + + + LDRE Y+L + A D GTPP+ +
Sbjct: 629 RRSFR-----LDPVSGR----LSTISSLDREEQAF-YSLLVLATDLGTPPQSS 671
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 23/99 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL-NHFRIVPTK 72
++ EN PIGT VI++ A D D +N ++SY TI + P NHF I K
Sbjct: 1428 SIVENIPIGTSVISVTAHDPD-ADINGQLSY-----------TIIQQMPRGNHFTIDEVK 1475
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
GT I +DRE A L + LT++A D+ P
Sbjct: 1476 ---GT------IYTNAEIDREFANL-FELTVKANDQAVP 1504
>gi|301623207|ref|XP_002940911.1| PREDICTED: protocadherin Fat 1-like isoform 1 [Xenopus (Silurana)
tropicalis]
Length = 4590
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P+FS+FV + +++E+ PIGT V+T+ A D D G + +I YS+R G G+G FTI E
Sbjct: 1030 LHTPLFSEFVSKGSIREDVPIGTPVMTVSAHDED-TGRDGEIRYSIRDGSGVGVFTIHEE 1088
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
GT + N LDRE Y LT+ A D+G P ++
Sbjct: 1089 --------------KGTIRTADN------LDRETTS-HYWLTVYATDRGVVPLSSF 1123
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 56/112 (50%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVFS Y V E+ G V+ + A DAD P +N+ I YS+ G+
Sbjct: 3332 NSPVFSQNTYTTVVGEDSVSGQSVLMVVADDADGP-LNNHIRYSITEGN----------- 3379
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P N F I P + + + V KLLDRE+ GY LT++A D G PPR
Sbjct: 3380 PGNTFIIDPVRGE---------VKVNKLLDRELIS-GYTLTIQAEDNGQPPR 3421
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 18/112 (16%)
Query: 10 VYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-------RGGDG-LGYFTIDNEG 61
+Y E+ P+ + A P ++ ++Y++ +G +G + +I
Sbjct: 246 IYVEQANEHAPV------ISAVRLTHPELDKDLTYAIVTVDDNDQGPNGEIASLSIIAGD 299
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
PL F+ T+ PG+K EY IV +K + E+ P GYNLTL+A DKG+PP+
Sbjct: 300 PLQLFKT--TRTSPGSK--EYKIVAVKETEWEMQPFGYNLTLQAKDKGSPPQ 347
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ +Y+ TV E+ P ++ L D D +N ++++ + GGD LG F I+N
Sbjct: 2915 NPPRFTAEIYKGTVSEDDPPDGVIAILSTTDNDTEEINKEVTFHITGGDPLGQFAIEN-- 2972
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE+ Y L + A D
Sbjct: 2973 ----------------MQHEWKVYVRKPLDREVKD-NYLLNITATD 3001
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 50/113 (44%), Gaps = 22/113 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+N P F+ Y+A V EN PIG+ V ++ A D D G +G ++I N
Sbjct: 459 INTPEFTQTSYKAVVDENSPIGSSVFSVHAVDHD------------EGENGFITYSIANI 506
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P P ID + I L+ LD E+ P Y L +RA D G P R
Sbjct: 507 NPQ------PFAIDAFSGV----ITTLEDLDYELMPRIYTLKIRASDWGLPYR 549
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y +++ E+ P+GT V+ + A D +N++I+Y + G+ G FT
Sbjct: 3227 NPPVFEHREYGSSLTEDAPVGTEVLQVYATSRDIE-VNAEITYKIISGNEHGKFT----- 3280
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I+P T I ++ LD E +P Y LT+ A D GTPP
Sbjct: 3281 -----------INPVTGM----IFIIASLDYETSP-EYYLTVEATDGGTPP 3315
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS Y TV EN T ++ ++A DAD G+N K+ YS+ G F+ID
Sbjct: 3122 NAPEFSADPYTVTVYENTEPQTPLLRVQAIDAD-LGLNHKVQYSLVSS-AEGQFSIDELS 3179
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I + K LDRE+ + Y LT++A D+G P +
Sbjct: 3180 GI--------------------ISLEKPLDRELQAV-YTLTVKATDQGLPRK 3210
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ +G+ V+ + A D D G N+++ YS+ G+ FTID
Sbjct: 1559 HAPWFTSSFYEGRVYESAAVGSAVLQVSALDKD-KGKNAEVGYSIESGNTANAFTID--- 1614
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+ I+ T K LDR Y L ++A D G PP
Sbjct: 1615 PV--LGIIKTA---------------KELDRNNHGR-YELVVKATDHGIPP 1647
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
+KEN P+G +I ++A D D G + K+ Y++ GG+ F +D E
Sbjct: 727 IKENVPVGANIIHMEANDLD-AGFSGKLLYAISGGNDDSCFAVDMETGW----------- 774
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPRNGL 124
+ +L LDRE+ YNL + D G P + +++ N L
Sbjct: 775 ---------LKILSPLDRELKD-QYNLNITVYDLGIPQKSSWRLLDVNVL 814
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 17/93 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL----GYFTI 57
NAPVF Y+A + EN P GT V+ ++A D D G N ++SY + L F++
Sbjct: 2806 NAPVFDSNPYKAFIVENLPEGTKVVQVRAFDLD-VGSNGQVSYMLGHSQDLEEIKELFSV 2864
Query: 58 DNE-------GPLNH-----FRIVPTKIDPGTK 78
D E G L+H + IV D G K
Sbjct: 2865 DRETGWVTTLGELDHEKTNKYHIVVVAYDHGDK 2897
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 46/113 (40%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N PVF + Y AT+ E IGT V+ + A D D G N+ IS+ + G+ YF ID
Sbjct: 2280 NPPVFREKTYAATLSEASVIGTSVVQINAKDPD-SGQNNAISFHLVETSGNISQYFHIDA 2338
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L I K LD E L +RA D G PP
Sbjct: 2339 SSGL--------------------IETAKPLDYEYFQ-ECTLVVRATDNGIPP 2370
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y V+E+ P+GT++ L A D D G++ ++ +S+ +G G F +D
Sbjct: 924 NPPVFIPSNYHVKVREDLPVGTVITWLDAYDPD-VGLSGQVRFSLL-ENGDGKFEVD--- 978
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT RA D+G P
Sbjct: 979 -----------------KVSGAVRIIQELDFEEKQV-YNLTARAKDRGKP 1010
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+++P F Y+ + EN P+ TLV LKA D D G+ +++Y + F I+
Sbjct: 2488 LHSPKFGQNEYEVELSENSPVQTLVTELKAVDED-KGLYGQLTYHIINDFAKDNFNINER 2546
Query: 61 GPL 63
G L
Sbjct: 2547 GQL 2549
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 7/110 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N P+F + TV ++ +G + T+ A DAD + + Y + GD L FT++ N
Sbjct: 566 NIPLFEKVNCEGTVPKDLGVGEQITTVSAIDADELQL---VKYRIESGDELDLFTLNPNS 622
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIA-PLGYNLTLRAVDKG 109
G L+ + P P K Y++ + +A P+ N+T+ + KG
Sbjct: 623 GVLSLKQ--PLSEGPANKVSFYSLRITATDGENLAQPIYINITVTSSRKG 670
>gi|296472443|tpg|DAA14558.1| TPA: FAT tumor suppressor homolog 1-like [Bos taurus]
Length = 4588
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 58/114 (50%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y A V E+ + VIT+ A DAD P NS I Y++ G N+G
Sbjct: 3331 NAPVFSQDTYTAVVSEDAVLEQSVITVMADDADGPS-NSHIHYAIIDG---------NQG 3380
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
P IDP + + V KLLDRE GY LT++A D G+PPR T
Sbjct: 3381 S-------PFTIDPARGE----VKVTKLLDRETIS-GYTLTVQASDNGSPPRVT 3422
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVF FV + VKEN P+G+ V+ + A D D G + +I YS+R G G+G F ID E
Sbjct: 1029 LHPPVFPSFVEKGAVKENAPLGSSVMKVSARDED-MGRDGEIHYSIRDGSGVGVFRIDEE 1087
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE + Y LT+ A D+G P ++
Sbjct: 1088 TGV--------------------IETSDRLDRE-STSHYWLTVYASDQGVVPLSSF 1122
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 57/118 (48%), Gaps = 23/118 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS Y TV EN GTL+ ++A DAD G+N KISYS+ G F+I+
Sbjct: 3121 NAPEFSADPYTITVFENTEPGTLLTRVQATDAD-AGLNRKISYSLLNS-ADGQFSINELS 3178
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I + K LDRE+ + Y LTL+AVD G P R T T
Sbjct: 3179 GI--------------------IQLEKPLDRELQAV-YTLTLKAVDHGLPRRLTATGT 3215
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ + DAD +N +++Y + GGD LG F I+N
Sbjct: 2916 PRFTAEIYKGTVSEDDPPGGVIAIVSTTDADSEEINRQVTYYITGGDPLGQFAIEN---- 2971
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE Y LT+ A D
Sbjct: 2972 --------------IQNEWKVYVKKPLDREERD-SYLLTITATD 3000
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 47/110 (42%), Gaps = 22/110 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ Y+A+ EN PIGT V+++ A D D G N ++YS+ L
Sbjct: 461 PEFTQTAYKASFDENVPIGTTVMSVSAVDPD-EGENGYVTYSI--------------ANL 505
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
NH V E LD E+ P Y L +RA D G+P R
Sbjct: 506 NHVPFVINHFTGAVSTSEN-------LDYELMPRVYTLRIRASDWGSPYR 548
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ IGT V+ + AA D N++I+YS+ G+ G F+ID+
Sbjct: 3226 NPPVFEYREYGATVSEDILIGTEVLQVYAASRDIEA-NAEITYSIISGNEHGKFSIDS-- 3282
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I +++ LD E + Y LT+ A D GTP
Sbjct: 3283 ------------------KTGAIFIIENLDYE-SSHEYYLTVEATDGGTP 3313
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKENQP+G+ ++ + A D D G N K+ Y+V GG+ F +D E +
Sbjct: 726 VKENQPVGSSLLVMNATDLD-TGFNGKLVYAVSGGNEDSCFIMDMETGM----------- 773
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ +L LDRE Y L + D G P R +
Sbjct: 774 ---------LKILSPLDRETTDR-YTLNITVSDLGLPQRAAWH 806
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 20/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y T+ E IGT V+ ++A DAD N ISY + G +
Sbjct: 2279 NPPVFAQQSYATTLSEASVIGTSVVQVRATDADSEP-NRGISYHMVGNHSKSH------- 2330
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+HF +D GT I +++ LD E + +++RAVD G PP
Sbjct: 2331 --DHFH-----VDSGTGL----ISLVRTLDYE-QFRQHQISVRAVDGGMPP 2369
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
L FR V + PG++ EY + +D + P GYNLTL+A DKGTPP+
Sbjct: 300 LQQFRTV--RSSPGSR--EYKLKATGAIDWDSHPFGYNLTLQAKDKGTPPQ 346
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ +G++V+ + A D D G N+++ YS+ G+ FTID
Sbjct: 1558 HAPWFTSSSYEGRVYESAAVGSVVLQVTALDKD-KGKNAEVLYSIESGNIGNSFTID--- 1613
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+ +I + LDR + Y+L ++A D+G PP
Sbjct: 1614 PILG-----------------SIKTARELDRS-NQVAYDLMVKATDRGDPP 1646
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 10/114 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y ++EN+P+G V+ L D D +S+ G+ G F ++ +G
Sbjct: 3436 NAPVFSRGNYSLIIQENKPVGFSVLQLVVTDRDSSHNGPPFFFSIVSGNEEGAFEVNQQG 3495
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR---EIAPLGYNLTLRAVDKGTPP 112
L + K+ K++ ++ +K+ D +++ L Y + +R +++ P
Sbjct: 3496 ALLTAAAINRKV------KDHYLLHVKVADNGKPQLSSLTY-IDIRVIEESVYP 3542
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 23/101 (22%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
Y+ V+E+ P GT+++ L+A D D G +S++ YS+ G G F +D
Sbjct: 932 YRVKVREDLPEGTIIMWLEAHDPD-LGQSSQVRYSLL-DHGEGNFDVD------------ 977
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT+RA DKG P
Sbjct: 978 --------KLSGAVRIIQQLDFEKKQV-YNLTVRAKDKGKP 1009
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F ++ + + P GT VI + A+DAD G N+ I+Y++ D+E
Sbjct: 2592 NAPQFRATKFEVNIGSSAPKGTSVIKVLASDAD-EGSNADITYAIEA---------DSES 2641
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I TK+ L L+ E+ + +RAVD G+P RE+
Sbjct: 2642 VKENLEINRASGVITTKES------LIGLENEV----FTFFVRAVDNGSPQRES 2685
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 21/114 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S+ VY + EN P V+ ++A D D + K++Y + G+ G+F+I+++
Sbjct: 1135 NAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSS-DDKLTYKITSGNPQGFFSINSK- 1192
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
T + T +K LDRE + L + D G+PP+ T
Sbjct: 1193 ---------TGLITTTARK---------LDREQQD-EHILEVTVTDNGSPPKLT 1227
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + Y A VK + +G ++ + A D D G N ++ Y ++ + +F I + G
Sbjct: 2077 NAPVFVNLPYYALVKVDAAVGQVIRHVTAVDRD-SGRNGEVHYFLK--ERHEHFQIGSSG 2133
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVL 87
++ + +P T KEY I V+
Sbjct: 2134 EIS----LKKPFEPDTLNKEYLITVV 2155
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 18/129 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTID 58
N+PV Y+A + EN P G+ VI ++A+D D G N ++ Y++ + D + F ++
Sbjct: 2805 NSPVLESSPYEAFIVENLPAGSRVIQIRASDLD-SGSNGQVMYNLDQSQSVDVIESFAVN 2863
Query: 59 NE-GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTPPR 113
E G + R + + K+ Y I V+ E L ++T+ V+ +PPR
Sbjct: 2864 METGWITTLRELDHE-----KRDSYQIKVVASDHGEKVQLSSTAIVDVTVTDVND-SPPR 2917
Query: 114 ---ETYKAT 119
E YK T
Sbjct: 2918 FTAEIYKGT 2926
>gi|403271744|ref|XP_003927769.1| PREDICTED: protocadherin Fat 4 [Saimiri boliviensis boliviensis]
Length = 4981
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y ++ EN P+G+ V+ DAD G+NS+++YS+ GD LG FT+D G
Sbjct: 1940 NPPIFSLNSYSTSLMENLPVGSTVLVFNVTDADD-GINSQLAYSIASGDSLGQFTVDKNG 1998
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L VLK LDRE YNL ++ D P + +T +
Sbjct: 1999 VLK---------------------VLKALDRESQSF-YNLVVQVHDLPQIPASRFTSTAQ 2036
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ +Y + E PIGT V + A D+D S+ SY + G+ G F+
Sbjct: 3402 PVFTLSIYSVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGAFS------- 3454
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T K I V LDRE P+ YNL++ AVD GTP
Sbjct: 3455 ---------INPQTGK----ITVTAELDRETLPV-YNLSVLAVDSGTP 3488
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS VY+ + E P G+ V + A D D G+N+ + YS+ G+GLG+F I
Sbjct: 473 PVFSQQVYRVNLSEEAPPGSYVSGVSATDGD-SGLNANLRYSIVSGNGLGWFHIS----- 526
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T G LDRE+A L + A D+G P+ +Y
Sbjct: 527 EHSGLVTTGAAGG-------------LDRELAS-QIVLNISARDQGVHPKVSY 565
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y+ + EN GT +I + AAD D G N ++ Y + G+ F ID+
Sbjct: 2150 NNPIFAQALYKVEINENTLTGTDIIQVFAADGD-EGTNGQVRYGIVNGNTNQEFRIDSVT 2208
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
I V K LDRE P Y LT++A D+G+ PR+
Sbjct: 2209 GA--------------------ITVAKPLDREKTPT-YLLTVQATDRGSTPRK 2240
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD P N IS + GG NE HF + +K
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSPAANGNISVQILGG---------NEQ--RHFEVQSSK 413
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK-GTPPRETYKA 118
+ P I V LDRE P YNLT+ D G PP +A
Sbjct: 414 V-PNLSL----IKVASALDRERIP-SYNLTVSVSDNYGAPPAAAVQA 454
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N+ I Y ++ +EG
Sbjct: 246 NPPVFGSSHYQAGVPEDAVVGSSVLQVAAADAD-EGTNADIRYRLQ-----------DEG 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P ++DP T I V + LD E A Y+LT++A+D+G P
Sbjct: 294 -------TPFQMDPETGL----ITVREPLDFE-ARRQYSLTVQAMDRGVP 331
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF Y TV EN P GT VI L A DAD G N+ I+Y+V+ D F ID
Sbjct: 3190 NSPVFLSDDYFPTVLENAPSGTTVIHLNATDAD-SGTNAVIAYTVQSSDS-DLFVID 3244
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF Y+ T+ E++P+ + ++A+D D G N +I+Y++ G+ F I +G
Sbjct: 992 NSPVFDQLSYEVTLSESEPVNSRFFKVQASDKD-SGANGEIAYAIAEGNTGDAFGIFPDG 1050
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D + + +VV DR + PL + + +
Sbjct: 1051 QL----YIKSELDRELQDRYVLMVVAS--DRAVEPLSATVNVTVI 1089
Score = 43.1 bits (100), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G N+ + YS+ G + G F+
Sbjct: 1311 NTPSFPKTTLFVDVLENMRIGELVSSVTATDSD-SGDNADLHYSITGTNNHGTFS----- 1364
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1365 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1402
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G VI A D+D G++ + SY + G+ G F +D
Sbjct: 131 NAPVFPDPSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIIRGNEAGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P R Y
Sbjct: 189 -----------ITLNPSGEGAFLHLVSKGGLDREVTP-QYQLLVEVEDKGEPKRRGY 233
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A +KEN+P G+ + T+ A D D G N + YS+ GD
Sbjct: 685 NSPVFYPVQYFAHIKENEPGGSYITTVSATDPD-LGTNGTVKYSISAGD 732
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 22/109 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQAT+ E+ T V+ + A+D D G N I YS+ G+ F ID+
Sbjct: 1206 NAPKFLKDFYQATISESAANLTQVLRVSASDVD-EGNNGLIHYSIIKGNEERQFAIDSTS 1264
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGT 110
+ ++ LD E P Y+L + AVD GT
Sbjct: 1265 G--------------------QVALIGKLDYEATPT-YSLVIEAVDSGT 1292
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 22/121 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS AT+ E+ IG++V T+ A D D MN I YS+ G+ G F I++
Sbjct: 3085 HTPEFSQSHMSATIPESHGIGSIVRTVSARDRD-TAMNGLIKYSISSGNEEGIFAINSST 3143
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ + + K LD E+ + +T+ A D G R Y +
Sbjct: 3144 GV--------------------LTLAKALDYELCQ-KHEMTISATDGGWVARTGYCSVTV 3182
Query: 122 N 122
N
Sbjct: 3183 N 3183
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP F Y V +N +GT +I + A D G+NS++ Y + + LG F +DN+
Sbjct: 2979 NAPQFLKIKYFTPVTKNVKVGTKLIKVTAIDDKDFGLNSEVEYFISNDNHLGKFKLDND 3037
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVFS Y V EN +G V ++ A+ D +NS I+Y + GD G F I+
Sbjct: 789 NPPVFSQVAYSFVVFENVALGYHVGSVSASTMD---LNSNITYLITTGDQKGMFAIN 842
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 21/105 (20%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
Y +V EN P GT ++ L+A D D G N + +S++ + E FR
Sbjct: 588 YDVSVVENAPTGTELLVLRATDGD-LGDNGTVRFSLQ----------EAETDRRSFR--- 633
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+DP + + + + LDRE Y+L + A D G+PP+ +
Sbjct: 634 --LDPVSGR----LSTISSLDREDQAF-YSLLVLATDMGSPPQSS 671
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 45/110 (40%), Gaps = 26/110 (23%)
Query: 4 PVFSDFVYQATVKENQPIGTL--VITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
P+F Y V EN +GTL I A D G NSK+SY + GG+ FT+ G
Sbjct: 2257 PIFELSPYSVNVPEN--LGTLPRTILQVVARDDDQGSNSKLSYVLFGGNEDNAFTLSASG 2314
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L V + LDRE + LT+ A D G+P
Sbjct: 2315 ELR---------------------VTQSLDRETKE-HFVLTITATDSGSP 2342
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 23/99 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL-NHFRIVPTK 72
++ EN PIGT VI++ A D D +N ++SY TI + P NHF I K
Sbjct: 1428 SIVENIPIGTSVISVTAHDPD-ADINGQLSY-----------TIIQQMPRGNHFTIDEVK 1475
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
GT I +DRE A L + LT++A D+ P
Sbjct: 1476 ---GT------IYTNAEIDREFANL-FELTVKANDQAVP 1504
>gi|297674308|ref|XP_002815174.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Pongo abelii]
Length = 5022
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y ++ EN P+G+ V+ DAD G+NS+++YS+ GD LG FT+D G
Sbjct: 1940 NPPIFSLNSYSTSLMENLPVGSTVLVFNVTDADD-GINSQLTYSIASGDSLGQFTVDKNG 1998
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L VLK LDRE YNL ++ D P + +T +
Sbjct: 1999 VLK---------------------VLKALDRESQSF-YNLVVQVHDLPQIPASRFTSTAQ 2036
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 54/113 (47%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS VY+ + E P G+ V + A D D G+N+ + YSV G+GLG+F I
Sbjct: 473 PVFSQQVYRVNLSEEAPPGSYVSGISATDGD-SGLNANLRYSVVSGNGLGWFHIS----- 526
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T G LDRE+A L + A D+G P+ +Y
Sbjct: 527 EHSGLVTTGSSGG-------------LDRELAS-QIVLNISARDQGVHPKVSY 565
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y+ + EN GT +I + AAD D G N ++ Y + G+ F ID+
Sbjct: 2150 NNPIFAQALYKVEINENTLTGTDIIQVFAADGD-EGTNGQVRYGIVNGNTNQEFRIDSVT 2208
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I V K LDRE P Y+LT++A D+G+ PR
Sbjct: 2209 GA--------------------ITVAKPLDREKTPT-YHLTVQATDRGSTPR 2239
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 51/108 (47%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ +Y + E PIGT V + A D+D S+ Y + G+ G F+
Sbjct: 3444 PVFTLNIYSVQISEGVPIGTHVTFVSAFDSDSIPSWSRFFYFIGSGNENGAFS------- 3496
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I V LDRE P+ YNL++ AVD GTP
Sbjct: 3497 ---------INPQTGQ----ITVTAELDRETLPI-YNLSVLAVDSGTP 3530
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 51/110 (46%), Gaps = 24/110 (21%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD P N IS + GG NE HF + +K
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSPAANGNISVQILGG---------NEQ--RHFEVQSSK 413
Query: 73 IDPGTKKKEYNIVVLKL---LDREIAPLGYNLTLRAVDK-GTPPRETYKA 118
+ N+ ++K+ LDRE P YNLT+ D G PP +A
Sbjct: 414 VP--------NLXLIKVASALDRERIP-SYNLTVSVSDNYGAPPGAAVQA 454
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N+ I Y ++ +EG
Sbjct: 246 NPPVFGSSHYQAGVPEDAVVGSSVLQVAAADAD-EGTNADIRYRLQ-----------DEG 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P ++DP T I V + LD E A Y+LT++A+D+G P
Sbjct: 294 -------TPFQMDPETGL----ITVREPLDFE-ARRQYSLTVQAMDRGVP 331
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF Y+ T+ E++P+ + ++A+D D G N +I+Y++ G+ F I +G
Sbjct: 992 NSPVFDQLSYEVTLSESEPVNSRFFKVQASDKD-SGANGEIAYTIAEGNTGDAFGIFPDG 1050
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D + + +VV DR + PL + + +
Sbjct: 1051 QL----YIKSELDRELQDRYVLMVVAS--DRAVEPLSATVNVTVI 1089
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQAT+ E+ T V+ + A+D D G N I YS+ G+ F ID+
Sbjct: 1206 NAPKFLKDFYQATISESAANLTQVLRVSASDVD-EGNNGLIHYSIIKGNEERQFAIDSTS 1264
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ ++ LD E P Y+L ++AVD GT P
Sbjct: 1265 G--------------------QVALIGKLDYEATP-AYSLVIQAVDSGTIP 1294
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF Y TV EN P GT VI L A DAD G N+ I+Y+++ D F ID
Sbjct: 3232 NSPVFLSDDYFPTVLENAPSGTTVIHLNATDAD-SGTNAVIAYTIQSSDS-DLFVID 3286
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G N+ + YS+ G + G F+
Sbjct: 1311 NTPSFPKSTLFVDVLENMRIGELVSSVTATDSD-SGDNADLYYSITGTNNHGTFS----- 1364
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1365 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1402
Score = 42.4 bits (98), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 22/121 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS AT+ E+ IG++V T+ A D D MN I YS+ G+ G F I++
Sbjct: 3127 HTPEFSQSHMSATIPESHSIGSIVRTVSARDRD-AAMNGLIKYSISSGNEEGIFAINSST 3185
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ + + K LD E+ + +T+ A+D G R Y +
Sbjct: 3186 GI--------------------LTLAKALDYELCQ-KHEMTISAIDGGWVARTGYCSVTV 3224
Query: 122 N 122
N
Sbjct: 3225 N 3225
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G VI A D+D G++ + SY + G+ G F +D
Sbjct: 131 NAPVFPDPSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIIRGNEAGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P R Y
Sbjct: 189 -----------ITLNPSGEGAFLHLVSKGGLDREVTP-QYQLLVEVEDKGEPKRRGY 233
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A +KEN+P G+ + T+ A D D G N + YS+ GD
Sbjct: 685 NSPVFYPVQYFAHIKENEPGGSYITTVSATDPD-LGTNGTVKYSISAGD 732
Score = 38.5 bits (88), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N PVFS Y V EN +G V ++ A+ D +NS ISY + GD G F I++
Sbjct: 789 NPPVFSQVAYSFVVFENVALGYHVGSVSASTMD---LNSNISYLITTGDQKGMFAINH 843
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 26/110 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y T+ E+ P GT V+ + A+DAD MN+ I + GG+ FT
Sbjct: 2402 NVPTFASKAYFTTIPEDAPTGTDVLLVNASDAD-ASMNAVI--RIIGGN--SQFT----- 2451
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I+ LLDRE Y L + D G+P
Sbjct: 2452 -----------INPSTGQ----IITSALLDRETKD-NYTLVVVCSDAGSP 2485
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 4 PVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
PVFS Y +V EN P GT ++ L+A D D G N + +S++ + E
Sbjct: 580 PVFSQPEGYDVSVVENAPTGTELLMLRATDGD-LGDNGTVRFSLQ----------EAETD 628
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
FR +DP + + + + LDRE Y+L + A D G+PP+ +
Sbjct: 629 RRSFR-----LDPVSGR----LSTISSLDREEQAF-YSLLVLATDLGSPPQSS 671
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F Y V +N +GT ++ + A D G+NS++ Y + + LG F +DN+
Sbjct: 3021 NTPQFLKSKYFTPVTKNVKVGTKLMKVTAIDDKDFGLNSEVEYFISNDNHLGKFKLDND 3079
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 23/99 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL-NHFRIVPTK 72
++ EN PIGT VI++ A D D +N ++SY TI + P NHF I K
Sbjct: 1428 SIVENIPIGTSVISVTAHDPD-ADINGQLSY-----------TIIQQMPRGNHFTIDEVK 1475
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
GT I +DRE A L + LT++A D+ P
Sbjct: 1476 ---GT------IYTNAEIDREFANL-FELTVKANDQAVP 1504
>gi|38195903|gb|AAR13653.1| fat-like cadherin FATJ protein [Homo sapiens]
Length = 3222
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y ++ EN P+G+ V+ DAD G+NS+++YS+ GD LG FT+D G
Sbjct: 238 NPPIFSLNSYSTSLMENLPVGSTVLVFNVTDADD-GINSQLTYSIASGDSLGQFTVDKNG 296
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L VLK LDRE YNL ++ D P + +T +
Sbjct: 297 VLK---------------------VLKALDRESQSF-YNLVVQVHDLPQIPASRFTSTAQ 334
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+F+ +Y + E PIGT V + A D+D S+ SY + G+ G F+
Sbjct: 1700 PIFTLNIYSVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGAFS------- 1752
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I V LDRE P+ YNL++ AVD GTP
Sbjct: 1753 ---------INPQTGQ----ITVTAELDRETLPI-YNLSVLAVDSGTP 1786
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y+ + EN GT +I + AAD D G N ++ Y + G+ F ID+
Sbjct: 448 NNPIFAQALYKVEINENTLTGTDIIQVFAADGD-EGTNGQVRYGIVNGNTNQEFRIDSVT 506
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I V K LDRE P Y+LT++A D+G+ PR
Sbjct: 507 GA--------------------ITVAKPLDREKTPT-YHLTVQATDRGSTPR 537
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF Y TV EN P GT VI L A DAD G N+ I+Y+V+ D F ID
Sbjct: 1488 NSPVFLSDDYFPTVLENAPSGTTVIHLNATDAD-SGTNAVIAYTVQSSDS-DLFVID 1542
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 22/121 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS AT+ E+ IG++V T+ A D D MN I YS+ G+ G F I++
Sbjct: 1383 HTPEFSQSHMSATIPESHSIGSIVRTVSARDRD-AAMNGLIKYSISSGNEEGIFAINSST 1441
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ + + K LD E+ + +T+ A+D G R Y +
Sbjct: 1442 GI--------------------LTLAKALDYELCQ-KHEMTISAIDGGWVARTGYCSVTV 1480
Query: 122 N 122
N
Sbjct: 1481 N 1481
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP F Y V +N +GT +I + A D G+NS++ Y + + LG F +DN+
Sbjct: 1277 NAPQFLKSKYFTPVTKNVKVGTKLIRVTAIDDKDFGLNSEVEYFISNDNHLGKFKLDND 1335
>gi|165932370|ref|NP_078858.4| protocadherin Fat 4 precursor [Homo sapiens]
gi|172046149|sp|Q6V0I7.2|FAT4_HUMAN RecName: Full=Protocadherin Fat 4; Short=hFat4; AltName:
Full=Cadherin family member 14; AltName: Full=FAT tumor
suppressor homolog 4; AltName: Full=Fat-like cadherin
protein FAT-J; Flags: Precursor
Length = 4981
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y ++ EN P+G+ V+ DAD G+NS+++YS+ GD LG FT+D G
Sbjct: 1940 NPPIFSLNSYSTSLMENLPVGSTVLVFNVTDADD-GINSQLTYSIASGDSLGQFTVDKNG 1998
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L VLK LDRE YNL ++ D P + +T +
Sbjct: 1999 VLK---------------------VLKALDRESQSF-YNLVVQVHDLPQIPASRFTSTAQ 2036
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS VY+ + E P G+ V + A D D G+N+ + YS+ G+GLG+F I
Sbjct: 473 PVFSQQVYRVNLSEEAPPGSYVSGISATDGD-SGLNANLRYSIVSGNGLGWFHIS----- 526
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T G LDRE+A L + A D+G P+ +Y
Sbjct: 527 EHSGLVTTGSSGG-------------LDRELAS-QIVLNISARDQGVHPKVSY 565
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+F+ +Y + E PIGT V + A D+D S+ SY + G+ G F+
Sbjct: 3402 PIFTLNIYSVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGAFS------- 3454
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I V LDRE P+ YNL++ AVD GTP
Sbjct: 3455 ---------INPQTGQ----ITVTAELDRETLPI-YNLSVLAVDSGTP 3488
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y+ + EN GT +I + AAD D G N ++ Y + G+ F ID+
Sbjct: 2150 NNPIFAQALYKVEINENTLTGTDIIQVFAADGD-EGTNGQVRYGIVNGNTNQEFRIDSVT 2208
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I V K LDRE P Y+LT++A D+G+ PR
Sbjct: 2209 GA--------------------ITVAKPLDREKTPT-YHLTVQATDRGSTPR 2239
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD P N IS + GG NE HF + +K
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSPAANGNISVQILGG---------NEQ--RHFEVQSSK 413
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK-GTPPRETYKA 118
+ P I V LDRE P YNLT+ D G PP +A
Sbjct: 414 V-PNLSL----IKVASALDRERIP-SYNLTVSVSDNYGAPPGAAVQA 454
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N+ I Y ++ +EG
Sbjct: 246 NPPVFGSSHYQAGVPEDAVVGSSVLQVAAADAD-EGTNADIRYRLQ-----------DEG 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P ++DP T I V + LD E A Y+LT++A+D+G P
Sbjct: 294 -------TPFQMDPETGL----ITVREPLDFE-ARRQYSLTVQAMDRGVP 331
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF Y TV EN P GT VI L A DAD G N+ I+Y+V+ D F ID
Sbjct: 3190 NSPVFLSDDYFPTVLENAPSGTTVIHLNATDAD-SGTNAVIAYTVQSSDS-DLFVID 3244
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF Y+ T+ E++P+ + ++A+D D G N +I+Y++ G+ F I +G
Sbjct: 992 NSPVFDQLSYEVTLSESEPVNSRFFKVQASDKD-SGANGEIAYTIAEGNTGDAFGIFPDG 1050
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D + + +VV DR + PL + + +
Sbjct: 1051 QL----YIKSELDRELQDRYVLMVVAS--DRAVEPLSATVNVTVI 1089
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQAT+ E+ T V+ + A+D D G N I YS+ G+ F ID+
Sbjct: 1206 NAPKFLKDFYQATISESAANLTQVLRVSASDVD-EGNNGLIHYSIIKGNEERQFAIDSTS 1264
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ ++ LD E P Y+L ++AVD GT P
Sbjct: 1265 G--------------------QVTLIGKLDYEATP-AYSLVIQAVDSGTIP 1294
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G N+ + YS+ G + G F+
Sbjct: 1311 NTPSFPKSTLFVDVLENMRIGELVSSVTATDSD-SGDNADLYYSITGTNNHGTFS----- 1364
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1365 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1402
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 22/121 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS AT+ E+ IG++V T+ A D D MN I YS+ G+ G F I++
Sbjct: 3085 HTPEFSQSHMSATIPESHSIGSIVRTVSARDRD-AAMNGLIKYSISSGNEEGIFAINSST 3143
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ + + K LD E+ + +T+ A+D G R Y +
Sbjct: 3144 GI--------------------LTLAKALDYELCQ-KHEMTISAIDGGWVARTGYCSVTV 3182
Query: 122 N 122
N
Sbjct: 3183 N 3183
Score = 42.0 bits (97), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G VI A D+D G++ + SY + G+ G F +D
Sbjct: 131 NAPVFPDPSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIIRGNEAGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P R Y
Sbjct: 189 -----------ITLNPSGEGAFLHLVSKGGLDREVTP-QYQLLVEVEDKGEPKRRGY 233
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A +KEN+P G+ + T+ A D D G N + YS+ GD
Sbjct: 685 NSPVFYPVQYFAHIKENEPGGSYITTVSATDPD-LGTNGTVKYSISAGD 732
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP F Y V +N +GT +I + A D G+NS++ Y + + LG F +DN+
Sbjct: 2979 NAPQFLKSKYFTPVTKNVKVGTKLIRVTAIDDKDFGLNSEVEYFISNDNHLGKFKLDND 3037
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVFS Y V EN +G V ++ A+ D +NS ISY + GD G F I+
Sbjct: 789 NPPVFSQVAYSFVVFENVALGYHVGSVSASTMD---LNSNISYLITTGDQKGMFAIN 842
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 4 PVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
PVFS Y +V EN P GT ++ L+A D D G N + +S++ + E
Sbjct: 580 PVFSQPEGYDVSVVENAPTGTELLMLRATDGD-LGDNGTVRFSLQ----------EAETD 628
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
FR +DP + + + + LDRE Y+L + A D G+PP+ +
Sbjct: 629 RRSFR-----LDPVSGR----LSTISSLDREEQAF-YSLLVLATDLGSPPQSS 671
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 23/99 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL-NHFRIVPTK 72
++ EN PIGT VI++ A D D +N ++SY TI + P NHF I K
Sbjct: 1428 SIVENIPIGTSVISVTAHDPD-ADINGQLSY-----------TIIQQMPRGNHFTIDEVK 1475
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
GT I +DRE A L + LT++A D+ P
Sbjct: 1476 ---GT------IYTNAEIDREFANL-FELTVKANDQAVP 1504
>gi|410304872|gb|JAA31036.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
Length = 4588
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVFS FV + TVKE+ P+G+LV+T+ A D D G + +I YS+R G G+G F I E
Sbjct: 1029 LHPPVFSSFVEKGTVKEDAPVGSLVMTVSAHDED-AGRDGEIRYSIRDGSGVGVFKIGEE 1087
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE + Y LT+ A D+G P ++
Sbjct: 1088 TGV--------------------IETSDRLDRE-STSHYWLTVFATDQGVVPLSSF 1122
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 56/112 (50%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y + E+ + VIT+ A DAD P NS I YS+ G+ FTID
Sbjct: 3331 NTPVFSQDTYTTVISEDAVLEQSVITVMADDADGPS-NSHIHYSIIDGNQGSSFTID--- 3386
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P + + + V KLLDRE+ GY LT++A D G+PPR
Sbjct: 3387 --------PVRGE---------VKVTKLLDREMIS-GYTLTVQASDNGSPPR 3420
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N +++Y + GGD LG F ++N
Sbjct: 2916 PRFTAEIYKGTVSEDDPPGGVIAILSTTDADSEEINRQVTYFITGGDPLGQFAVEN---- 2971
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE Y LT+ A D
Sbjct: 2972 --------------IQNEWKVYVKKPLDREKRD-NYLLTITATD 3000
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A EN PIGT V++L A D D G N ++YS+
Sbjct: 459 NPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPD-EGENGYVTYSIAN------------- 504
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
LNH VP ID T + + LD E+ P Y L +RA D G P R
Sbjct: 505 -LNH---VPFAIDHFTGA----VSTSENLDYELMPRVYTLRIRASDWGLPYR 548
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 58/119 (48%), Gaps = 25/119 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP FS Y TV EN GTL+ ++A DAD G+N KI YS + D G F+I+
Sbjct: 3121 NAPEFSADPYAITVFENTEPGTLLTRVQATDAD-AGLNRKILYSLIDSAD--GQFSINEL 3177
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I + K LDRE+ + Y L+L+AVD+G P R T T
Sbjct: 3178 SGI--------------------IQLEKPLDRELQAV-YTLSLKAVDQGLPRRLTATGT 3215
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P+F +Y+A + E+ P G V +KA DAD ++ K+ YS+ G+ +F ID+
Sbjct: 2386 NPPLFEQQIYEARISEHAPHGHFVTCVKAYDADSSDID-KLQYSILSGNDHKHFVIDS 2442
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ +GT V+ + AA D N++I+YS+ G+ G F+ID+
Sbjct: 3226 NPPVFEYREYGATVSEDILVGTEVLQVYAASRDIEA-NAEITYSIISGNEHGKFSIDS-- 3282
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + Y LT+ A D GTP
Sbjct: 3283 ------------------KTGAVFIIENLDYE-SSHEYYLTVEATDGGTP 3313
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKENQP+G+ VI + D D G N K+ Y++ GG+ F ID E +
Sbjct: 726 VKENQPVGSSVIFMNTTDLD-TGFNGKLVYAISGGNEDSCFMIDMETGM----------- 773
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ +L LDRE Y L + D G P + ++
Sbjct: 774 ---------LKILSPLDRETTD-KYTLNITVYDLGIPQKAAWR 806
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 10 VYQATVKENQPIGTLV-ITLKAADADPPGMNSKISYSVRGGDG-LGYFTIDNEGPLNHFR 67
V+ E P+ T V ++ D DP + +G +G + +I L FR
Sbjct: 245 VHIEQANECAPVITAVTLSPSELDRDPAYAIVTVDDCDQGANGDIASLSIVAGDLLQQFR 304
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
V + PG+K EY + + +D + P GYNLTL+A DKGTPP+
Sbjct: 305 TVRSF--PGSK--EYKVKAIGGVDWDSHPFGYNLTLQAKDKGTPPQ 346
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 20/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y AT+ E IGT V+ ++A D+D N ISY + G +
Sbjct: 2279 NPPVFAQQSYAATLSEASVIGTSVVQVRATDSDSEP-NRGISYQMFGNHSKSH------- 2330
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+HF +D T I +L+ LD E + + +RAVD G PP
Sbjct: 2331 --DHFH-----VDSSTGL----ISLLRTLDYE-QSRQHTIFVRAVDGGMPP 2369
Score = 41.6 bits (96), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ +G++V+ + A D D G N+++ YS+ G+ +G
Sbjct: 1558 HAPWFTASSYKGRVYESAAVGSVVLQVTALDKD-KGKNAEVLYSIESGN-IG-------- 1607
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F I P T K+ LDR Y+L ++A DKG+PP
Sbjct: 1608 --NSFMIDPVLGSIKTAKE---------LDRS-NQAEYDLMVKATDKGSPP 1646
Score = 39.7 bits (91), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N+PVF Y+A + EN P G+ VI ++A+DAD G N ++ YS+
Sbjct: 2805 NSPVFESSPYEAFIVENLPGGSRVIQIRASDAD-SGTNGQVMYSL 2848
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 56/114 (49%), Gaps = 10/114 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y ++EN+P+G V+ L D D +++ G+ F ++ +G
Sbjct: 3436 NAPVFSRGNYSVIIQENKPVGFSVLQLVVTDEDSSHNGPPFFFTIVTGNDEKAFEVNPQG 3495
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR---EIAPLGYNLTLRAVDKGTPP 112
++ T K+K++ ++ +K+ D +++ L Y + +R +++ P
Sbjct: 3496 ------VLLTSSAIKRKEKDHYLLQVKVADNGKPQLSSLTY-IDIRVIEESIYP 3542
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ V+E+ P GT+++ L+A D D G + ++ YS+ G G F +D
Sbjct: 923 NPPTFIPPNYRVKVREDLPEGTVIMWLEAHDPD-LGQSGQVRYSLL-DHGEGNFDVD--- 977
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT+RA DKG P
Sbjct: 978 -----------------KLSGAVRIVQPLDFEKKQV-YNLTVRAKDKGKP 1009
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
NAP S+ VY + EN P V+ ++A D D N K+ Y + G+ G+F+I
Sbjct: 1135 NAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSS-NDKLMYKITSGNPQGFFSI 1189
>gi|410349159|gb|JAA41183.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
Length = 4588
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVFS FV + TVKE+ P+G+LV+T+ A D D G + +I YS+R G G+G F I E
Sbjct: 1029 LHPPVFSSFVEKGTVKEDAPVGSLVMTVSAHDED-AGRDGEIRYSIRDGSGVGVFKIGEE 1087
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE + Y LT+ A D+G P ++
Sbjct: 1088 TGV--------------------IETSDRLDRE-STSHYWLTVFATDQGVVPLSSF 1122
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 56/112 (50%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y + E+ + VIT+ A DAD P NS I YS+ G+ FTID
Sbjct: 3331 NTPVFSQDTYTTVISEDAVLEQSVITVMADDADGPS-NSHIHYSIIDGNQGSSFTID--- 3386
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P + + + V KLLDRE+ GY LT++A D G+PPR
Sbjct: 3387 --------PVRGE---------VKVTKLLDREMIS-GYTLTVQASDNGSPPR 3420
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N +++Y + GGD LG F ++N
Sbjct: 2916 PRFTAEIYKGTVSEDDPPGGVIAILSTTDADSEEINRQVTYFITGGDPLGQFAVEN---- 2971
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE Y LT+ A D
Sbjct: 2972 --------------IQNEWKVYVKKPLDREKRD-NYLLTITATD 3000
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A EN PIGT V++L A D D G N ++YS+
Sbjct: 459 NPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPD-EGENGYVTYSIAN------------- 504
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
LNH VP ID T + + LD E+ P Y L +RA D G P R
Sbjct: 505 -LNH---VPFAIDHFTGA----VSTSENLDYELMPRVYTLRIRASDWGLPYR 548
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 58/119 (48%), Gaps = 25/119 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP FS Y TV EN GTL+ ++A DAD G+N KI YS + D G F+I+
Sbjct: 3121 NAPEFSADPYAITVFENTEPGTLLTRVQATDAD-AGLNRKILYSLIDSAD--GQFSINEL 3177
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I + K LDRE+ + Y L+L+AVD+G P R T T
Sbjct: 3178 SGI--------------------IQLEKPLDRELQAV-YTLSLKAVDQGLPRRLTATGT 3215
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P+F +Y+A + E+ P G V +KA DAD ++ K+ YS+ G+ +F ID+
Sbjct: 2386 NPPLFEQQIYEARISEHAPHGHFVTCVKAYDADSSDID-KLQYSILSGNDHKHFVIDS 2442
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ +GT V+ + AA D N++I+YS+ G+ G F+ID+
Sbjct: 3226 NPPVFEYREYGATVSEDILVGTEVLQVYAASRDIEA-NAEITYSIISGNEHGKFSIDS-- 3282
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + Y LT+ A D GTP
Sbjct: 3283 ------------------KTGAVFIIENLDYE-SSHEYYLTVEATDGGTP 3313
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKENQP+G+ VI + D D G N K+ Y++ GG+ F ID E +
Sbjct: 726 VKENQPVGSSVIFMNTTDLD-TGFNGKLVYAISGGNEDSCFMIDMETGM----------- 773
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ +L LDRE Y L + D G P + ++
Sbjct: 774 ---------LKILSPLDRETTD-KYTLNITVYDLGIPQKAAWR 806
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 10 VYQATVKENQPIGTLV-ITLKAADADPPGMNSKISYSVRGGDG-LGYFTIDNEGPLNHFR 67
V+ E P+ T V ++ D DP + +G +G + +I L FR
Sbjct: 245 VHIEQANECAPVITAVTLSPSELDRDPAYAIVTVDDCDQGANGDIASLSIVAGDLLQQFR 304
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
V + PG+K EY + + +D + P GYNLTL+A DKGTPP+
Sbjct: 305 TVRSF--PGSK--EYKVKAIGGVDWDSHPFGYNLTLQAKDKGTPPQ 346
Score = 42.7 bits (99), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 20/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y AT+ E IGT V+ ++A D+D N ISY + G +
Sbjct: 2279 NPPVFAQQSYAATLSEASVIGTSVVQVRATDSDSEP-NRGISYQMFGNHSKSH------- 2330
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+HF +D T I +L+ LD E + + +RAVD G PP
Sbjct: 2331 --DHFH-----VDSSTGL----ISLLRTLDYE-QSRQHTIFVRAVDGGMPP 2369
Score = 41.6 bits (96), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ +G++V+ + A D D G N+++ YS+ G+ +G
Sbjct: 1558 HAPWFTASSYKGRVYESAAVGSVVLQVTALDKD-KGKNAEVLYSIESGN-IG-------- 1607
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F I P T K+ LDR Y+L ++A DKG+PP
Sbjct: 1608 --NSFMIDPVLGSIKTAKE---------LDRS-NQAEYDLMVKATDKGSPP 1646
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N+PVF Y+A + EN P G+ VI ++A+DAD G N ++ YS+
Sbjct: 2805 NSPVFESSPYEAFIVENLPGGSRVIQIRASDAD-SGTNGQVMYSL 2848
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 56/114 (49%), Gaps = 10/114 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y ++EN+P+G V+ L D D +++ G+ F ++ +G
Sbjct: 3436 NAPVFSRGNYSVIIQENKPVGFSVLQLVVTDEDSSHNGPPFFFTIVTGNDEKAFEVNPQG 3495
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR---EIAPLGYNLTLRAVDKGTPP 112
++ T K+K++ ++ +K+ D +++ L Y + +R +++ P
Sbjct: 3496 ------VLLTSSAIKRKEKDHYLLQVKVADNGKPQLSSLTY-IDIRVIEESIYP 3542
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ V+E+ P GT+++ L+A D D G + ++ YS+ G G F +D
Sbjct: 923 NPPTFIPPNYRVKVREDLPEGTVIMWLEAHDPD-LGQSGQVRYSLL-DHGEGNFDVD--- 977
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT+RA DKG P
Sbjct: 978 -----------------KLSGAVRIVQPLDFEKKQV-YNLTVRAKDKGKP 1009
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
NAP S+ VY + EN P V+ ++A D D N K+ Y + G+ G+F+I
Sbjct: 1135 NAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSS-NDKLMYKITSGNPQGFFSI 1189
>gi|410267946|gb|JAA21939.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
Length = 4588
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVFS FV + TVKE+ P+G+LV+T+ A D D G + +I YS+R G G+G F I E
Sbjct: 1029 LHPPVFSSFVEKGTVKEDAPVGSLVMTVSAHDED-AGRDGEIRYSIRDGSGVGVFKIGEE 1087
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE + Y LT+ A D+G P ++
Sbjct: 1088 TGV--------------------IETSDRLDRE-STSHYWLTVFATDQGVVPLSSF 1122
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 56/112 (50%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y + E+ + VIT+ A DAD P NS I YS+ G+ FTID
Sbjct: 3331 NTPVFSQDTYTTVISEDAVLEQSVITVMADDADGPS-NSHIHYSIIDGNQGSSFTID--- 3386
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P + + + V KLLDRE+ GY LT++A D G+PPR
Sbjct: 3387 --------PVRGE---------VKVTKLLDREMIS-GYTLTVQASDNGSPPR 3420
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N +++Y + GGD LG F ++N
Sbjct: 2916 PRFTAEIYKGTVSEDDPPGGVIAILSTTDADSEEINRQVTYFITGGDPLGQFAVEN---- 2971
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE Y LT+ A D
Sbjct: 2972 --------------IQNEWKVYVKKPLDREKRD-NYLLTITATD 3000
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A EN PIGT V++L A D D G N ++YS+
Sbjct: 459 NPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPD-EGENGYVTYSIAN------------- 504
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
LNH VP ID T + + LD E+ P Y L +RA D G P R
Sbjct: 505 -LNH---VPFAIDHFTGA----VSTSENLDYELMPRVYTLRIRASDWGLPYR 548
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 58/119 (48%), Gaps = 25/119 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP FS Y TV EN GTL+ ++A DAD G+N KI YS + D G F+I+
Sbjct: 3121 NAPEFSADPYAITVFENTEPGTLLTRVQATDAD-AGLNRKILYSLIDSAD--GQFSINEL 3177
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I + K LDRE+ + Y L+L+AVD+G P R T T
Sbjct: 3178 SGI--------------------IQLEKPLDRELQAV-YTLSLKAVDQGLPRRLTATGT 3215
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ +GT V+ + AA D N++I+YS+ G+ G F+ID+
Sbjct: 3226 NPPVFEYREYGATVSEDILVGTEVLQVYAASRDIEA-NAEITYSIISGNEHGKFSIDS-- 3282
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + Y LT+ A D GTP
Sbjct: 3283 ------------------KTGAVFIIENLDYE-SSHEYYLTVEATDGGTP 3313
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKENQP+G+ VI + D D G N K+ Y++ GG+ F ID E +
Sbjct: 726 VKENQPVGSSVIFMNTTDLD-TGFNGKLVYAISGGNEDSCFMIDMETGM----------- 773
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ +L LDRE Y L + D G P + ++
Sbjct: 774 ---------LKILSPLDRETTD-KYTLNITVYDLGIPQKAAWR 806
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 10 VYQATVKENQPIGTLV-ITLKAADADPPGMNSKISYSVRGGDG-LGYFTIDNEGPLNHFR 67
V+ E P+ T V ++ D DP + +G +G + +I L FR
Sbjct: 245 VHIEQANECAPVITAVTLSPSELDRDPAYAIVTVDDCDQGANGDIASLSIVAGDLLQQFR 304
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
V + PG+K EY + + +D + P GYNLTL+A DKGTPP+
Sbjct: 305 TVRSF--PGSK--EYKVKAIGGVDWDSHPFGYNLTLQAKDKGTPPQ 346
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P F +Y+A + E+ P G V +KA DAD ++ K+ YS+ G+ +F ID+
Sbjct: 2386 NPPFFEQQIYEARISEHAPHGHFVTCVKAYDADSSDID-KLQYSILSGNDHKHFVIDS 2442
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 20/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y AT+ E IGT V+ ++A D+D N ISY + G +
Sbjct: 2279 NPPVFAQQSYAATLSEASVIGTSVVQVRATDSDSEP-NRGISYQMFGNHSKSH------- 2330
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+HF +D T I +L+ LD E + + +RAVD G PP
Sbjct: 2331 --DHFH-----VDSSTGL----ISLLRTLDYE-QSRQHTIFVRAVDGGMPP 2369
Score = 41.6 bits (96), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ +G++V+ + A D D G N+++ YS+ G+ +G
Sbjct: 1558 HAPWFTASSYKGRVYESAAVGSVVLQVTALDKD-KGKNAEVLYSIESGN-IG-------- 1607
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F I P T K+ LDR Y+L ++A DKG+PP
Sbjct: 1608 --NSFMIDPVLGSIKTAKE---------LDRS-NQAEYDLMVKATDKGSPP 1646
Score = 39.7 bits (91), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N+PVF Y+A + EN P G+ VI ++A+DAD G N ++ YS+
Sbjct: 2805 NSPVFESSPYEAFIVENLPGGSRVIQIRASDAD-SGTNGQVMYSL 2848
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 56/114 (49%), Gaps = 10/114 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y ++EN+P+G V+ L D D +++ G+ F ++ +G
Sbjct: 3436 NAPVFSRGNYSVIIQENKPVGFSVLQLVVTDEDSSHNGPPFFFTIVTGNDEKAFEVNPQG 3495
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR---EIAPLGYNLTLRAVDKGTPP 112
++ T K+K++ ++ +K+ D +++ L Y + +R +++ P
Sbjct: 3496 ------VLLTSSAIKRKEKDHYLLQVKVADNGKPQLSSLTY-IDIRVIEESIYP 3542
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ V+E+ P GT+++ L+A D D G + ++ YS+ G G F +D
Sbjct: 923 NPPTFIPPNYRVKVREDLPEGTVIMWLEAHDPD-LGQSGQVRYSLL-DHGEGNFDVD--- 977
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT+RA DKG P
Sbjct: 978 -----------------KLSGAVRIVQPLDFEKKQV-YNLTVRAKDKGKP 1009
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
NAP S+ VY + EN P V+ ++A D D N K+ Y + G+ G+F+I
Sbjct: 1135 NAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSS-NDKLMYKITSGNPQGFFSI 1189
>gi|410225470|gb|JAA09954.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
gi|410225472|gb|JAA09955.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
Length = 4588
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVFS FV + TVKE+ P+G+LV+T+ A D D G + +I YS+R G G+G F I E
Sbjct: 1029 LHPPVFSSFVEKGTVKEDAPVGSLVMTVSAHDED-AGRDGEIRYSIRDGSGVGVFKIGEE 1087
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE + Y LT+ A D+G P ++
Sbjct: 1088 TGV--------------------IETSDRLDRE-STSHYWLTVFATDQGVVPLSSF 1122
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 56/112 (50%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y + E+ + VIT+ A DAD P NS I YS+ G+ FTID
Sbjct: 3331 NTPVFSQDTYTTVISEDAVLEQSVITVMADDADGPS-NSHIHYSIIDGNQGSSFTID--- 3386
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P + + + V KLLDRE+ GY LT++A D G+PPR
Sbjct: 3387 --------PVRGE---------VKVTKLLDREMIS-GYTLTVQASDNGSPPR 3420
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N +++Y + GGD LG F ++N
Sbjct: 2916 PRFTAEIYKGTVSEDDPPGGVIAILSTTDADSEEINRQVTYFITGGDPLGQFAVEN---- 2971
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE Y LT+ A D
Sbjct: 2972 --------------IQNEWKVYVKKPLDREKRD-NYLLTITATD 3000
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A EN PIGT V++L A D D G N ++YS+
Sbjct: 459 NPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPD-EGENGYVTYSIAN------------- 504
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
LNH VP ID T + + LD E+ P Y L +RA D G P R
Sbjct: 505 -LNH---VPFAIDHFTGA----VSTSENLDYELMPRVYTLRIRASDWGLPYR 548
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 58/119 (48%), Gaps = 25/119 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP FS Y TV EN GTL+ ++A DAD G+N KI YS + D G F+I+
Sbjct: 3121 NAPEFSADPYAITVFENTEPGTLLTRVQATDAD-AGLNRKILYSLIDSAD--GQFSINEL 3177
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I + K LDRE+ + Y L+L+AVD+G P R T T
Sbjct: 3178 SGI--------------------IQLEKPLDRELQAV-YTLSLKAVDQGLPRRLTATGT 3215
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P+F +Y+A + E+ P G V +KA DAD ++ K+ YS+ G+ +F ID+
Sbjct: 2386 NPPLFEQQIYEARISEHAPHGHFVTCVKAYDADSSDID-KLQYSILSGNDHKHFVIDS 2442
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ +GT V+ + AA D N++I+YS+ G+ G F+ID+
Sbjct: 3226 NPPVFEYREYGATVSEDILVGTEVLQVYAASRDIEA-NAEITYSIISGNEHGKFSIDS-- 3282
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + Y LT+ A D GTP
Sbjct: 3283 ------------------KTGAVFIIENLDYE-SSHEYYLTVEATDGGTP 3313
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKENQP+G+ VI + D D G N K+ Y++ GG+ F ID E +
Sbjct: 726 VKENQPVGSSVIFMNTTDLD-TGFNGKLVYAISGGNEDSCFMIDMETGM----------- 773
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ +L LDRE Y L + D G P + ++
Sbjct: 774 ---------LKILSPLDRETTD-KYTLNITVYDLGIPQKAAWR 806
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 10 VYQATVKENQPIGTLV-ITLKAADADPPGMNSKISYSVRGGDG-LGYFTIDNEGPLNHFR 67
V+ E P+ T V ++ D DP + +G +G + +I L FR
Sbjct: 245 VHIEQANECAPVITAVTLSPSELDRDPAYAIVTVDDCDQGANGDIASLSIVAGDLLQQFR 304
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
V + PG+K EY + + +D + P GYNLTL+A DKGTPP+
Sbjct: 305 TVRSF--PGSK--EYKVKAIGGVDWDSHPFGYNLTLQAKDKGTPPQ 346
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 20/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y AT+ E IGT V+ ++A D+D N ISY + G +
Sbjct: 2279 NPPVFAQQSYAATLSEASVIGTSVVQVRATDSDSEP-NRGISYQMFGNHSKSH------- 2330
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+HF +D T I +L+ LD E + + +RAVD G PP
Sbjct: 2331 --DHFH-----VDSSTGL----ISLLRTLDYE-QSRQHTIFVRAVDGGMPP 2369
Score = 41.6 bits (96), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ +G++V+ + A D D G N+++ YS+ G+ +G
Sbjct: 1558 HAPWFTASSYKGRVYESAAVGSVVLQVTALDKD-KGKNAEVLYSIESGN-IG-------- 1607
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F I P T K+ LDR Y+L ++A DKG+PP
Sbjct: 1608 --NSFMIDPVLGSIKTAKE---------LDRS-NQAEYDLMVKATDKGSPP 1646
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N+PVF Y+A + EN P G+ VI ++A+DAD G N ++ YS+
Sbjct: 2805 NSPVFESSPYEAFIVENLPGGSRVIQIRASDAD-SGTNGQVMYSL 2848
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 56/114 (49%), Gaps = 10/114 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y ++EN+P+G V+ L D D +++ G+ F ++ +G
Sbjct: 3436 NAPVFSRGNYSVIIQENKPVGFSVLQLVVTDEDSSHNGPPFFFTIVTGNDEKAFEVNPQG 3495
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR---EIAPLGYNLTLRAVDKGTPP 112
++ T K+K++ ++ +K+ D +++ L Y + +R +++ P
Sbjct: 3496 ------VLLTSSAIKRKEKDHYLLQVKVADNGKPQLSSLTY-IDIRVIEESIYP 3542
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ V+E+ P GT+++ L+A D D G + ++ YS+ G G F +D
Sbjct: 923 NPPTFIPPNYRVKVREDLPEGTVIMWLEAHDPD-LGQSGQVRYSLL-DHGEGNFDVD--- 977
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT+RA DKG P
Sbjct: 978 -----------------KLSGAVRIVQPLDFEKKQV-YNLTVRAKDKGKP 1009
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
NAP S+ VY + EN P V+ ++A D D N K+ Y + G+ G+F+I
Sbjct: 1135 NAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSS-NDKLMYKITSGNPQGFFSI 1189
>gi|332820729|ref|XP_003310638.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Pan troglodytes]
Length = 4588
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVFS FV + TVKE+ P+G+LV+T+ A D D G + +I YS+R G G+G F I E
Sbjct: 1029 LHPPVFSSFVEKGTVKEDAPVGSLVMTVSAHDED-AGRDGEIRYSIRDGSGVGVFKIGEE 1087
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE + Y LT+ A D+G P ++
Sbjct: 1088 TGV--------------------IETSDRLDRE-STSHYWLTVFATDQGVVPLSSF 1122
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 56/112 (50%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y + E+ + VIT+ A DAD P NS I YS+ G+ FTID
Sbjct: 3331 NTPVFSQDTYTTVISEDAVLEQSVITVMADDADGPS-NSHIHYSIIDGNQGSSFTID--- 3386
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P + + + V KLLDRE+ GY LT++A D G+PPR
Sbjct: 3387 --------PVRGE---------VKVTKLLDREMIS-GYTLTVQASDNGSPPR 3420
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N +++Y + GGD LG F ++N
Sbjct: 2916 PRFTAEIYKGTVSEDDPPGGVIAILSTTDADSEEINRQVTYFITGGDPLGQFAVEN---- 2971
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE Y LT+ A D
Sbjct: 2972 --------------IQNEWKVYVKKPLDREKRD-NYLLTITATD 3000
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A EN PIGT V++L A D D G N ++YS+
Sbjct: 459 NPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPD-EGENGYVTYSIAN------------- 504
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
LNH VP ID T + + LD E+ P Y L +RA D G P R
Sbjct: 505 -LNH---VPFAIDHFTGA----VSTSENLDYELMPRVYTLRIRASDWGLPYR 548
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 58/119 (48%), Gaps = 25/119 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP FS Y TV EN GTL+ ++A DAD G+N KI YS + D G F+I+
Sbjct: 3121 NAPEFSADPYAITVFENTEPGTLLTRVQATDAD-AGLNRKILYSLIDSAD--GQFSINEL 3177
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I + K LDRE+ + Y L+L+AVD+G P R T T
Sbjct: 3178 SGI--------------------IQLEKPLDRELQAV-YTLSLKAVDQGLPRRLTATGT 3215
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ +GT V+ + AA D N++I+YS+ G+ G F+ID+
Sbjct: 3226 NPPVFEYREYGATVSEDILVGTEVLQVYAASRDIEA-NAEITYSIISGNEHGKFSIDS-- 3282
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + Y LT+ A D GTP
Sbjct: 3283 ------------------KTGAVFIIENLDYE-SSHEYYLTVEATDGGTP 3313
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKENQP+G+ VI + D D G N K+ Y++ GG+ F ID E +
Sbjct: 726 VKENQPVGSSVIFMNTTDLD-TGFNGKLVYAISGGNEDSCFMIDMETGM----------- 773
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ +L LDRE Y L + D G P + ++
Sbjct: 774 ---------LKILSPLDRETTD-KYTLNITVYDLGIPQKAAWR 806
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 10 VYQATVKENQPIGTLV-ITLKAADADPPGMNSKISYSVRGGDG-LGYFTIDNEGPLNHFR 67
V+ E P+ T V ++ D DP + +G +G + +I L FR
Sbjct: 245 VHIEQANECAPVITAVTLSPSELDRDPAYAIVTVDDCDQGANGDIASLSIVAGDLLQQFR 304
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
V + PG+K EY + + +D + P GYNLTL+A DKGTPP+
Sbjct: 305 TVRSF--PGSK--EYKVKAIGGVDWDSHPFGYNLTLQAKDKGTPPQ 346
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P F +Y+A + E+ P G V +KA DAD ++ K+ YS+ G+ +F ID+
Sbjct: 2386 NPPFFEQQIYEARISEHAPHGHFVTCVKAYDADSSDID-KLQYSILSGNDHKHFVIDS 2442
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 20/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y AT+ E IGT V+ ++A D+D N ISY + G +
Sbjct: 2279 NPPVFAQQSYAATLSEASVIGTSVVQVRATDSDSEP-NRGISYQMFGNHSKSH------- 2330
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+HF +D T I +L+ LD E + + +RAVD G PP
Sbjct: 2331 --DHFH-----VDSSTGL----ISLLRTLDYE-QSRQHTIFVRAVDGGMPP 2369
Score = 41.6 bits (96), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ +G++V+ + A D D G N+++ YS+ G+ +G
Sbjct: 1558 HAPWFTASSYKGRVYESAAVGSVVLQVTALDKD-KGKNAEVLYSIESGN-IG-------- 1607
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F I P T K+ LDR Y+L ++A DKG+PP
Sbjct: 1608 --NSFMIDPVLGSIKTAKE---------LDRS-NQAEYDLMVKATDKGSPP 1646
Score = 39.7 bits (91), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N+PVF Y+A + EN P G+ VI ++A+DAD G N ++ YS+
Sbjct: 2805 NSPVFESSPYEAFIVENLPGGSRVIQIRASDAD-SGTNGQVMYSL 2848
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 56/114 (49%), Gaps = 10/114 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y ++EN+P+G V+ L D D +++ G+ F ++ +G
Sbjct: 3436 NAPVFSRGNYSVIIQENKPVGFSVLQLVVTDEDSSHNGPPFFFTIVTGNDEKAFEVNPQG 3495
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR---EIAPLGYNLTLRAVDKGTPP 112
++ T K+K++ ++ +K+ D +++ L Y + +R +++ P
Sbjct: 3496 ------VLLTSSAIKRKEKDHYLLQVKVADNGKPQLSSLTY-IDIRVIEESIYP 3542
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
NAP S+ VY + EN P V+ ++A D D N K+ Y + G+ G+F+I
Sbjct: 1135 NAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSS-NDKLMYKITSGNPQGFFSI 1189
>gi|397506036|ref|XP_003823543.1| PREDICTED: protocadherin Fat 1 [Pan paniscus]
Length = 4588
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVFS FV + TVKE+ P+G+LV+T+ A D D G + +I YS+R G G+G F I E
Sbjct: 1029 LHPPVFSSFVEKGTVKEDAPVGSLVMTVSAHDED-AGRDGEIRYSIRDGSGVGVFKIGEE 1087
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE + Y LT+ A D+G P ++
Sbjct: 1088 TGV--------------------IETSDRLDRE-STSHYWLTVFATDQGVVPLSSF 1122
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 55/112 (49%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y + E+ + VIT+ A DAD P NS I YS+ G+ FTID
Sbjct: 3331 NTPVFSQDTYTTVISEDAVLEQSVITVMADDADGPS-NSHIHYSIIDGNQGSSFTID--- 3386
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P + + + V KLLDRE GY LT++A D G+PPR
Sbjct: 3387 --------PVRGE---------VKVTKLLDRETIS-GYTLTVQASDNGSPPR 3420
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N +++Y + GGD LG F ++N
Sbjct: 2916 PRFTAEIYKGTVSEDDPPGGVIAILSTTDADSEEINRQVTYFITGGDPLGQFAVEN---- 2971
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE Y LT+ A D
Sbjct: 2972 --------------IQNEWKVYVKKPLDREKRD-NYLLTITATD 3000
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A EN PIGT V++L A D D G N ++YS+
Sbjct: 459 NPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPD-EGENGYVTYSIAN------------- 504
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
LNH VP ID T + + LD E+ P Y L +RA D G P R
Sbjct: 505 -LNH---VPFAIDHFTGA----VSTSENLDYELMPRVYTLRIRASDWGLPYR 548
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 58/119 (48%), Gaps = 25/119 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP FS Y TV EN GTL+ ++A DAD G+N KI YS + D G F+I+
Sbjct: 3121 NAPEFSADPYAITVFENTEPGTLLTRVQATDAD-AGLNRKILYSLIDSAD--GQFSINEL 3177
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I + K LDRE+ + Y L+L+AVD+G P R T T
Sbjct: 3178 SGI--------------------IQLEKPLDRELQAV-YTLSLKAVDQGLPRRLTATGT 3215
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ +GT V+ + AA D N++I+YS+ G+ G F+ID+
Sbjct: 3226 NPPVFEYREYGATVSEDILVGTEVLQVYAASRDIEA-NAEITYSIISGNEHGKFSIDS-- 3282
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + Y LT+ A D GTP
Sbjct: 3283 ------------------KTGAVFIIENLDYE-SSHEYYLTVEATDGGTP 3313
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 20/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y AT+ E IGT V+ ++A D+D N ISY + G +
Sbjct: 2279 NSPVFAQQSYAATLSEASVIGTSVVQVRATDSDSEP-NRGISYQMFGNHSKSH------- 2330
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+HF +D T I +L+ LD E + + +RAVD G PP
Sbjct: 2331 --DHFH-----VDSSTGL----ISLLRTLDYE-QSRQHTIFVRAVDGGMPP 2369
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P+F +Y+A + E+ P G V +KA DAD ++ K+ YS+ G+ +F ID+
Sbjct: 2386 NPPLFEQQIYEARISEHAPHGHFVTCVKAYDADSSDID-KLQYSILSGNDHKHFVIDS 2442
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKENQP+G+ VI + D D G N K+ Y++ GG+ F ID E +
Sbjct: 726 VKENQPVGSSVIFMNTTDLD-TGFNGKLVYAISGGNEDSCFMIDMETGM----------- 773
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ +L LDRE Y L + D G P + ++
Sbjct: 774 ---------LKILSPLDRETTD-KYTLNITVYDLGIPQKAAWR 806
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 10 VYQATVKENQPIGTLV-ITLKAADADPPGMNSKISYSVRGGDG-LGYFTIDNEGPLNHFR 67
V+ E P+ T V ++ D DP + +G +G + +I L FR
Sbjct: 245 VHIEQANECAPVITAVTLSPSELDRDPAYAIVTVDDCDQGANGDIASLSIVAGDLLQQFR 304
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
V + PG+K EY + + +D + P GYNLTL+A DKGTPP+
Sbjct: 305 TVRSF--PGSK--EYKVKAIGGVDWDSHPFGYNLTLQAKDKGTPPQ 346
Score = 41.6 bits (96), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ +G++V+ + A D D G N+++ YS+ G+ +G
Sbjct: 1558 HAPWFTASSYKGRVYESAAVGSVVLQVTALDKD-KGKNAEVLYSIESGN-IG-------- 1607
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F I P T K+ LDR Y+L ++A DKG+PP
Sbjct: 1608 --NSFMIDPVLGSIKTAKE---------LDRS-NQAEYDLMVKATDKGSPP 1646
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N+PVF Y+A + EN P G+ VI ++A+DAD G N ++ YS+
Sbjct: 2805 NSPVFESSPYEAFIVENLPGGSRVIQIRASDAD-SGTNGQVMYSL 2848
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 56/114 (49%), Gaps = 10/114 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y ++EN+P+G V+ L D D +++ G+ F ++ +G
Sbjct: 3436 NAPVFSRGNYSVIIQENKPVGFSVLQLVVTDEDSSHNGPPFFFTIVTGNDEKAFEVNPQG 3495
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR---EIAPLGYNLTLRAVDKGTPP 112
++ T K+K++ ++ +K+ D +++ L Y + +R +++ P
Sbjct: 3496 ------VLLTSSAIKRKEKDHYLLQVKVADNGKPQLSSLTY-IDIRVIEESIYP 3542
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ V+E+ P GT+++ L+A D D G + ++ YS+ G G F +D
Sbjct: 923 NPPTFIPPNYRVKVREDLPEGTVIMWLEAHDPD-LGQSGQVRYSLL-DHGEGNFDVD--- 977
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT+RA DKG P
Sbjct: 978 -----------------KLSGAVRIVQPLDFEKKQV-YNLTVRAKDKGKP 1009
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 21/114 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S+ VY + EN P V+ ++A D D N K+ Y + G+ G+F+I +
Sbjct: 1135 NAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSS-NDKLMYKITSGNPQGFFSIHPK- 1192
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
T + T +K LDRE + L + D G+PP+ T
Sbjct: 1193 ---------TGLITTTSRK---------LDREQQD-EHILEVTVTDNGSPPKST 1227
>gi|426346210|ref|XP_004040777.1| PREDICTED: protocadherin Fat 1 [Gorilla gorilla gorilla]
Length = 4495
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVFS FV + TVKE+ P+G+LV+T+ A D D G + +I YS+R G G+G F I E
Sbjct: 1029 LHPPVFSSFVEKGTVKEDAPVGSLVMTVSAHDED-AGRDGEIRYSIRDGSGVGVFKIGEE 1087
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE + Y LT+ A D+G P ++
Sbjct: 1088 TGV--------------------IETSDRLDRE-STSHYWLTVFATDQGVVPLSSF 1122
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 55/112 (49%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y + E+ + VIT+ A DAD P NS I YS+ G+ FTID
Sbjct: 3238 NTPVFSQDTYTTVISEDAVLEQSVITVMADDADGPS-NSHIHYSIIDGNQGSSFTID--- 3293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P + + + V +LLDRE GY LT++A D G+PPR
Sbjct: 3294 --------PVRGE---------VKVTRLLDRETIS-GYTLTVQASDNGSPPR 3327
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N +++Y + GGD LG F ++N
Sbjct: 2916 PRFTAEIYKGTVSEDDPPGGVIAILSTTDADSEEINRQVTYFITGGDPLGQFAVEN---- 2971
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE Y LT+ A D
Sbjct: 2972 --------------IQNEWKVYVKKPLDREKRD-NYLLTITATD 3000
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A EN PIGT V++L A D D G N ++YS+
Sbjct: 459 NPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPD-EGENGYVTYSIAN------------- 504
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
LNH VP ID T + + LD E+ P Y L +RA D G P R
Sbjct: 505 -LNH---VPFAIDHFTGA----VSTSENLDYELMPRVYTLRIRASDWGLPYR 548
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKENQP+G+ VI + + D D G N K+ Y++ GG+ F ID E +
Sbjct: 726 VKENQPVGSSVIFMNSTDLD-TGFNGKLVYAISGGNEDSCFMIDMETGM----------- 773
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ +L LDRE Y L + D G P + ++
Sbjct: 774 ---------LKILSPLDRETTD-KYTLNITVYDLGIPQKAAWR 806
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P+F +Y+A + E+ P G V +KA DAD ++ K+ YS+ G+ +F ID+
Sbjct: 2386 NPPLFEQQIYEARISEHAPHGHFVTCVKAYDADSSDID-KLQYSILSGNDHKHFVIDS 2442
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 10 VYQATVKENQPIGTLV-ITLKAADADPPGMNSKISYSVRGGDG-LGYFTIDNEGPLNHFR 67
V+ E P+ T V ++ D DP + +G +G + +I L FR
Sbjct: 245 VHIEQANECAPVITAVTLSPSELDRDPAYAIVTVDDCDQGANGDIASLSIVAGDLLQQFR 304
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
V + PG+K EY + + +D + P GYNLTL+A DKGTPP+
Sbjct: 305 TVRSF--PGSK--EYKVKAIGGVDWDSHPFGYNLTLQAKDKGTPPQ 346
Score = 41.6 bits (96), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ +G++V+ + A D D G N+++ YS+ G+ +G
Sbjct: 1558 HAPWFTASSYKGRVYESAAVGSVVLQVTALDKD-KGKNAEVLYSIESGN-IG-------- 1607
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F I P T K+ LDR Y+L ++A DKG+PP
Sbjct: 1608 --NSFMIDPVLGSIKTAKE---------LDRS-NQAEYDLMVKATDKGSPP 1646
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 20/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y AT+ E IGT V+ ++A D+D N ISY + +
Sbjct: 2279 NPPVFAQQSYAATLSEASVIGTSVVQVRATDSDSEP-NRGISYQMFENHSKSH------- 2330
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+HF +D T I +L+ LD E + + +RAVD G PP
Sbjct: 2331 --DHFH-----VDSSTGL----ISLLRTLDYE-QSRQHTIFVRAVDGGMPP 2369
Score = 39.7 bits (91), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N+PVF Y+A + EN P G+ VI ++A+DAD G N ++ YS+
Sbjct: 2805 NSPVFESSPYEAFIVENLPGGSRVIQIRASDAD-SGTNGQVMYSL 2848
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ V+E+ P GT+++ L+A D D G + ++ YS+ G G F +D
Sbjct: 923 NPPTFIPPNYRVKVREDLPEGTVIMWLEAHDPD-LGQSGQVRYSLL-DHGEGNFDVD--- 977
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT+RA DKG P
Sbjct: 978 -----------------KLSGAVRIVQQLDFEKKQV-YNLTVRAKDKGKP 1009
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 56/114 (49%), Gaps = 10/114 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y ++EN+P+G V+ L D D +++ G+ F ++ +G
Sbjct: 3343 NAPVFSRGNYSVIIQENKPVGFSVLQLVVTDEDSSHNGPPFFFTIVTGNDEKAFEVNPQG 3402
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR---EIAPLGYNLTLRAVDKGTPP 112
++ T K+K++ ++ +K+ D +++ L Y + +R +++ P
Sbjct: 3403 ------VLLTSSAIKRKEKDHYLLQVKVADNGKPQLSSLTY-IDIRVIEESIYP 3449
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 21/114 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S+ VY + EN P V+ ++A D D N K+ Y + G+ G+F+I +
Sbjct: 1135 NAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSS-NDKLMYKITSGNPQGFFSIHPK- 1192
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
T + T +K LDRE + L + D G+PP+ T
Sbjct: 1193 ---------TGLITTTSRK---------LDREQQD-EHILEVTVTDNGSPPKST 1227
>gi|119625020|gb|EAX04615.1| FAT tumor suppressor homolog 1 (Drosophila), isoform CRA_b [Homo
sapiens]
Length = 3841
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVFS FV + TVKE+ P+G+LV+T+ A D D G + +I YS+R G G+G F I E
Sbjct: 1029 LHPPVFSSFVEKGTVKEDAPVGSLVMTVSAHDED-AGRDGEIRYSIRDGSGVGVFKIGEE 1087
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE + Y LT+ A D+G P ++
Sbjct: 1088 TGV--------------------IETSDRLDRE-STSHYWLTVFATDQGVVPLSSF 1122
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 55/112 (49%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y + E+ + VIT+ A DAD P NS I YS+ G+ FTID
Sbjct: 3334 NTPVFSQDTYTTVISEDAVLEQSVITVMADDADGPS-NSHIHYSIIDGNQGSSFTID--- 3389
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P + + + V KLLDRE GY LT++A D G+PPR
Sbjct: 3390 --------PVRGE---------VKVTKLLDRETIS-GYTLTVQASDNGSPPR 3423
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N +++Y + GGD LG F ++
Sbjct: 2919 PRFTAEIYKGTVSEDDPQGGVIAILSTTDADSEEINRQVTYFITGGDPLGQFAVE----- 2973
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
T + E+ + V K LDRE Y LT+ A D
Sbjct: 2974 -------------TIQNEWKVYVKKPLDREKRD-NYLLTITATD 3003
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A EN PIGT V++L A D D G N ++YS+
Sbjct: 459 NPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPD-EGENGYVTYSI--------------A 503
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
LNH VP ID T + + LD E+ P Y L +RA D G P R
Sbjct: 504 NLNH---VPFAIDHFTGA----VSTSENLDYELMPRVYTLRIRASDWGLPYR 548
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 58/119 (48%), Gaps = 25/119 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP FS Y TV EN GTL+ ++A DAD G+N KI YS + D G F+I+
Sbjct: 3124 NAPEFSADPYAITVFENTEPGTLLTRVQATDAD-AGLNRKILYSLIDSAD--GQFSINEL 3180
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I + K LDRE+ + Y L+L+AVD+G P R T T
Sbjct: 3181 SGI--------------------IQLEKPLDRELQAV-YTLSLKAVDQGLPRRLTATGT 3218
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKENQP+G+ VI + + D D G N K+ Y+V GG+ F ID E +
Sbjct: 726 VKENQPVGSSVIFMNSTDLD-TGFNGKLVYAVSGGNEDSCFMIDMETGM----------- 773
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ +L LDRE Y L + D G P + ++
Sbjct: 774 ---------LKILSPLDRETTD-KYTLNITVYDLGIPQKAAWR 806
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P+F +Y+A + E+ P G V +KA DAD ++ K+ YS+ G+ +F ID+
Sbjct: 2389 NPPLFEQQIYEARISEHAPHGHFVTCVKAYDADSSDID-KLQYSILSGNDHKHFVIDS 2445
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ +GT V+ + AA D N++I+YS+ G+ G F+ID+
Sbjct: 3229 NPPVFEYREYGATVSEDILVGTEVLQVYAASRDIEA-NAEITYSIISGNEHGKFSIDS-- 3285
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + Y LT+ A D GTP
Sbjct: 3286 ------------------KTGAVFIIENLDYE-SSHEYYLTVEATDGGTP 3316
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 10 VYQATVKENQPIGTLV-ITLKAADADPPGMNSKISYSVRGGDG-LGYFTIDNEGPLNHFR 67
V+ E P+ T V ++ D DP + +G +G + +I L FR
Sbjct: 245 VHIEQANECAPVITAVTLSPSELDRDPAYAIVTVDDCDQGANGDIASLSIVAGDLLQQFR 304
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
V + PG+K EY + + +D + P GYNLTL+A DKGTPP+
Sbjct: 305 TVRSF--PGSK--EYKVKAIGGIDWDSHPFGYNLTLQAKDKGTPPQ 346
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 19/111 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ +G++V+ + A D D G N+++ YS+ G T N G
Sbjct: 1558 HAPWFTASSYKGRVYESAAVGSVVLQVTALDKD-KGKNAEVLYSIESG------TFGNIG 1610
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F I P T K+ LDR Y+L ++A DKG+PP
Sbjct: 1611 --NSFMIDPVLGSIKTAKE---------LDRS-NQAEYDLMVKATDKGSPP 1649
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N+PVF Y+A + EN P G+ VI ++A+DAD G N ++ YS+
Sbjct: 2808 NSPVFESSPYEAFIVENLPGGSRVIQIRASDAD-SGTNGQVMYSL 2851
Score = 38.5 bits (88), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 20/110 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y T+ E IGT V+ ++A D+D N ISY + G +
Sbjct: 2282 NPPVFAQQSYAVTLSEASVIGTSVVQVRATDSDSEP-NRGISYQMFGNHSKSH------- 2333
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+HF +D T I +L+ LD E + + +RAVD G P
Sbjct: 2334 --DHFH-----VDSSTGL----ISLLRTLDYE-QSRQHTIFVRAVDGGMP 2371
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ V+E+ P GT+++ L+A D D G + ++ YS+ G G F +D
Sbjct: 923 NPPTFIPPNYRVKVREDLPEGTVIMWLEAHDPD-LGQSGQVRYSLL-DHGEGNFDVD--- 977
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT+RA DKG P
Sbjct: 978 -----------------KLSGAVRIVQQLDFEKKQV-YNLTVRAKDKGKP 1009
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 56/114 (49%), Gaps = 10/114 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y ++EN+P+G V+ L D D +++ G+ F ++ +G
Sbjct: 3439 NAPVFSRGNYSVIIQENKPVGFSVLQLVVTDEDSSHNGPPFFFTIVTGNDEKAFEVNPQG 3498
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR---EIAPLGYNLTLRAVDKGTPP 112
++ T K+K++ ++ +K+ D +++ L Y + +R +++ P
Sbjct: 3499 ------VLLTSSAIKRKEKDHYLLQVKVADNGKPQLSSLTY-IDIRVIEESIYP 3545
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 21/114 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S+ VY + EN P V+ ++A D D N K+ Y + G+ G+F+I +
Sbjct: 1135 NAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSS-NDKLMYKITSGNPQGFFSIHPK- 1192
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
T + T +K LDRE + L + D G+PP+ T
Sbjct: 1193 ---------TGLITTTSRK---------LDREQQD-EHILEVTVTDNGSPPKST 1227
>gi|1107687|emb|CAA60685.1| homologue of Drosophila Fat protein [Homo sapiens]
Length = 4590
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVFS FV + TVKE+ P+G+LV+T+ A D D G + +I YS+R G G+G F I E
Sbjct: 1029 LHPPVFSSFVEKGTVKEDAPVGSLVMTVSAHDED-AGRDGEIRYSIRDGSGVGVFKIGEE 1087
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE + Y LT+ A D+G P ++
Sbjct: 1088 TGV--------------------IETSDRLDRE-STSHYWLTVFATDQGVVPLSSF 1122
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 55/112 (49%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y + E+ + VIT+ A DAD P NS I YS+ G+ FTID
Sbjct: 3333 NTPVFSQDTYTTVISEDAVLEQSVITVMADDADGPS-NSHIHYSIIDGNQGSSFTID--- 3388
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P + + + V KLLDRE GY LT++A D G+PPR
Sbjct: 3389 --------PVRGE---------VKVTKLLDRETIS-GYTLTVQASDNGSPPR 3422
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N +++Y + GGD LG F ++
Sbjct: 2918 PRFTAEIYKGTVSEDDPQGGVIAILSTTDADSEEINRQVTYFITGGDPLGQFAVE----- 2972
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
T + E+ + V K LDRE Y LT+ A D
Sbjct: 2973 -------------TIQNEWKVYVKKPLDREKRD-NYLLTITATD 3002
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A EN PIGT +++L A D D G N ++YS+
Sbjct: 459 NPPEFTQTAYKAAFDENVPIGTTIMSLSAVDPD-EGENGYVTYSIAN------------- 504
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
LNH VP ID T + + LD E+ P Y L +RA D G P R
Sbjct: 505 -LNH---VPFAIDHFTGA----VSTSENLDYELMPRVYTLRIRASDWGLPYR 548
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 58/119 (48%), Gaps = 25/119 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP FS Y TV EN GTL+ ++A DAD G+N KI YS + D G F+I+
Sbjct: 3123 NAPEFSADPYAITVFENTEPGTLLTRVQATDAD-AGLNRKILYSLIDSAD--GQFSINEL 3179
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I + K LDRE+ + Y L+L+AVD+G P R T T
Sbjct: 3180 SGI--------------------IQLEKPLDRELQAV-YTLSLKAVDQGLPRRLTATGT 3217
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKENQP+G+ VI + + D D G N K+ Y+V GG+ F ID E +
Sbjct: 726 VKENQPVGSSVIFMNSTDLD-TGFNGKLVYAVSGGNEDSCFMIDMETGM----------- 773
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ +L LDRE Y L + D G P + ++
Sbjct: 774 ---------LKILSPLDRETTD-KYTLNITVYDLGIPQKAAWR 806
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 10 VYQATVKENQPIGTLV-ITLKAADADPPGMNSKISYSVRGGDG-LGYFTIDNEGPLNHFR 67
V+ E P+ T V ++ D DP + +G +G + +I L FR
Sbjct: 245 VHIEQANECAPVITAVTLSPSELDRDPAYAIVTVDDCDQGANGDIASLSIVAGDLLQQFR 304
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
V + PG+K EY + + +D + P GYNLTL+A DKGTPP+
Sbjct: 305 TVRSF--PGSK--EYKVKAIGDIDWDSHPFGYNLTLQAKDKGTPPQ 346
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ +GT V+ + AA D N++I+YS+ G+ G F+ID+
Sbjct: 3228 NPPVFEYREYGATVSEDILVGTEVLQVYAASRDIEA-NAEITYSIISGNEHGKFSIDS-- 3284
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + Y LT+ A D GTP
Sbjct: 3285 ------------------KTGAVFIIENLDYE-SSHEYYLTVEATDGGTP 3315
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P+F +Y+A + E+ P G V +KA DAD ++ K+ YS+ G+ +F ID+
Sbjct: 2389 NPPLFEQQIYEARISEHAPHGHFVTCVKAYDADSSDID-KLQYSILSGNDHKHFVIDS 2445
Score = 43.5 bits (101), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 19/111 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ +G++V+ + A D D G N+++ YS+ G+ I N G
Sbjct: 1558 HAPWFTASSYKGRVYESAAVGSVVLQVTALDKD-KGKNAEVLYSIESGN------IGNIG 1610
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F I P T K+ LDR Y+L ++A DKG+PP
Sbjct: 1611 --NSFMIDPVLGSIKTAKE---------LDRS-NQAEYDLMVKATDKGSPP 1649
Score = 39.7 bits (91), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N+PVF Y+A + EN P G+ VI ++A+DAD G N ++ YS+
Sbjct: 2807 NSPVFESSPYEAFIVENLPGGSRVIQIRASDAD-SGTNGQVMYSL 2850
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 20/110 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y T+ E IGT V+ ++A D+D N ISY + G +
Sbjct: 2282 NPPVFAQQSYAVTLSEASVIGTSVVQVRATDSDSEP-NRGISYQMFGNHSKSH------- 2333
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+HF +D T I +L+ LD E + + +RAVD G P
Sbjct: 2334 --DHFH-----VDSSTGL----ISLLRTLDYE-QSRQHTIFVRAVDGGMP 2371
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ V+E+ P GT+++ L+A D D G + ++ YS+ G G F +D
Sbjct: 923 NPPTFIPPNYRVKVREDLPEGTVIMWLEAHDPD-LGQSGQVRYSLL-DHGEGNFDVD--- 977
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT+RA DKG P
Sbjct: 978 -----------------KLSGAVRIVQQLDFEKKQV-YNLTVRAKDKGKP 1009
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 56/114 (49%), Gaps = 10/114 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y ++EN+P+G V+ L D D +++ G+ F ++ +G
Sbjct: 3438 NAPVFSRGNYSVIIQENKPVGFSVLQLVVTDEDSSHNGPPFFFTIVTGNDEKAFEVNPQG 3497
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR---EIAPLGYNLTLRAVDKGTPP 112
++ T K+K++ ++ +K+ D +++ L Y + +R +++ P
Sbjct: 3498 ------VLLTSSAIKRKEKDHYLLQVKVADNGKPQLSSLTY-IDIRVIEESIYP 3544
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 21/114 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S+ VY + EN P V+ ++A D D N K+ Y + G+ G+F+I +
Sbjct: 1135 NAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSS-NDKLMYKITSGNPQGFFSIHPK- 1192
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
T + T +K LDRE + L + D G+PP+ T
Sbjct: 1193 ---------TGLITTTSRK---------LDREQQD-EHILEVTVTDNGSPPKST 1227
>gi|119625019|gb|EAX04614.1| FAT tumor suppressor homolog 1 (Drosophila), isoform CRA_a [Homo
sapiens]
Length = 3377
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVFS FV + TVKE+ P+G+LV+T+ A D D G + +I YS+R G G+G F I E
Sbjct: 1029 LHPPVFSSFVEKGTVKEDAPVGSLVMTVSAHDED-AGRDGEIRYSIRDGSGVGVFKIGEE 1087
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE + Y LT+ A D+G P ++
Sbjct: 1088 TGV--------------------IETSDRLDRE-STSHYWLTVFATDQGVVPLSSF 1122
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N +++Y + GGD LG F ++
Sbjct: 2916 PRFTAEIYKGTVSEDDPQGGVIAILSTTDADSEEINRQVTYFITGGDPLGQFAVE----- 2970
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
T + E+ + V K LDRE Y LT+ A D
Sbjct: 2971 -------------TIQNEWKVYVKKPLDREKRD-NYLLTITATD 3000
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A EN PIGT V++L A D D G N ++YS+
Sbjct: 459 NPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPD-EGENGYVTYSI--------------A 503
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
LNH VP ID T + + LD E+ P Y L +RA D G P R
Sbjct: 504 NLNH---VPFAIDHFTGA----VSTSENLDYELMPRVYTLRIRASDWGLPYR 548
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 58/119 (48%), Gaps = 25/119 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP FS Y TV EN GTL+ ++A DAD G+N KI YS + D G F+I+
Sbjct: 3121 NAPEFSADPYAITVFENTEPGTLLTRVQATDAD-AGLNRKILYSLIDSAD--GQFSINEL 3177
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I + K LDRE+ + Y L+L+AVD+G P R T T
Sbjct: 3178 SGI--------------------IQLEKPLDRELQAV-YTLSLKAVDQGLPRRLTATGT 3215
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKENQP+G+ VI + + D D G N K+ Y+V GG+ F ID E +
Sbjct: 726 VKENQPVGSSVIFMNSTDLD-TGFNGKLVYAVSGGNEDSCFMIDMETGM----------- 773
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ +L LDRE Y L + D G P + ++
Sbjct: 774 ---------LKILSPLDRETTD-KYTLNITVYDLGIPQKAAWR 806
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P+F +Y+A + E+ P G V +KA DAD ++ K+ YS+ G+ +F ID+
Sbjct: 2386 NPPLFEQQIYEARISEHAPHGHFVTCVKAYDADSSDID-KLQYSILSGNDHKHFVIDS 2442
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ +GT V+ + AA D N++I+YS+ G+ G F+ID+
Sbjct: 3226 NPPVFEYREYGATVSEDILVGTEVLQVYAASRDIEA-NAEITYSIISGNEHGKFSIDS-- 3282
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + Y LT+ A D GTP
Sbjct: 3283 ------------------KTGAVFIIENLDYE-SSHEYYLTVEATDGGTP 3313
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 10 VYQATVKENQPIGTLV-ITLKAADADPPGMNSKISYSVRGGDG-LGYFTIDNEGPLNHFR 67
V+ E P+ T V ++ D DP + +G +G + +I L FR
Sbjct: 245 VHIEQANECAPVITAVTLSPSELDRDPAYAIVTVDDCDQGANGDIASLSIVAGDLLQQFR 304
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
V + PG+K EY + + +D + P GYNLTL+A DKGTPP+
Sbjct: 305 TVRSF--PGSK--EYKVKAIGGIDWDSHPFGYNLTLQAKDKGTPPQ 346
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ +G++V+ + A D D G N+++ YS+ G+ +G
Sbjct: 1558 HAPWFTASSYKGRVYESAAVGSVVLQVTALDKD-KGKNAEVLYSIESGN-IG-------- 1607
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F I P T K+ LDR Y+L ++A DKG+PP
Sbjct: 1608 --NSFMIDPVLGSIKTAKE---------LDRS-NQAEYDLMVKATDKGSPP 1646
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N+PVF Y+A + EN P G+ VI ++A+DAD G N ++ YS+
Sbjct: 2805 NSPVFESSPYEAFIVENLPGGSRVIQIRASDAD-SGTNGQVMYSL 2848
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 20/110 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y T+ E IGT V+ ++A D+D N ISY + G +
Sbjct: 2279 NPPVFAQQSYAVTLSEASVIGTSVVQVRATDSDSEP-NRGISYQMFGNHSKSH------- 2330
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+HF +D T I +L+ LD E + + +RAVD G P
Sbjct: 2331 --DHFH-----VDSSTGL----ISLLRTLDYE-QSRQHTIFVRAVDGGMP 2368
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ V+E+ P GT+++ L+A D D G + ++ YS+ G G F +D
Sbjct: 923 NPPTFIPPNYRVKVREDLPEGTVIMWLEAHDPD-LGQSGQVRYSLLDH-GEGNFDVD--- 977
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT+RA DKG P
Sbjct: 978 -----------------KLSGAVRIVQQLDFEKKQV-YNLTVRAKDKGKP 1009
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 21/114 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S+ VY + EN P V+ ++A D D N K+ Y + G+ G+F+I +
Sbjct: 1135 NAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSS-NDKLMYKITSGNPQGFFSIHPK- 1192
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
T + T +K LDRE + L + D G+PP+ T
Sbjct: 1193 ---------TGLITTTSRK---------LDREQQD-EHILEVTVTDNGSPPKST 1227
>gi|354474447|ref|XP_003499442.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2-like [Cricetulus
griseus]
Length = 4323
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+++P FS FVYQ V+EN P GT V+ + A D D G++ ++ Y +R G GL F+I+ +
Sbjct: 1017 LHSPHFSSFVYQGQVQENSPAGTQVMVVTAQDED-GGLDGELQYFLRAGTGLEAFSINQD 1075
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ + L LDRE P Y LT+ AVD+G+ P
Sbjct: 1076 TGM--------------------LETLVPLDREFTPY-YWLTVLAVDRGSVP 1106
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F+ +Y V EN +G ++T+ A D D P +N+ I+YS+ GG+ LG+FTI+
Sbjct: 3295 HHPRFTHDLYTVRVLENAVVGDTILTVSAFDEDGP-INNAITYSLVGGNQLGHFTIN--- 3350
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+ + V K LD E P Y+L LRA D G PP
Sbjct: 3351 -----------------PKKGKLQVAKALDWEQTP-SYSLKLRATDSGQPP 3383
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 52/113 (46%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+APVF+ Y+ T+ EN P GT V+T+ A D D G N +SYS+
Sbjct: 454 HAPVFNRSSYEGTLDENIPPGTSVLTVTATDQD-HGDNGCVSYSIVSP------------ 500
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
++VP IDP I K +D E+ Y +RA D G+P R+
Sbjct: 501 -----KVVPFSIDPYLGV----ISTTKPMDYELMRRIYTFRVRASDWGSPFRQ 544
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P FS VY +V E P T VI L A+D D G N +SY + G D +F I+
Sbjct: 2258 NPPTFSQLVYTTSVSEGLPAQTPVIQLLASDQD-SGKNQDVSYQIVEDGSDVSKFFRIN- 2315
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G+ + + I + LD E A + + +RA+D+G PP
Sbjct: 2316 ----------------GSTGEMFTI---QELDYE-AQQHFQVKVRAMDRGDPP 2348
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 40/92 (43%), Gaps = 18/92 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+ +V EN G LV TLK DAD N +++ + GD LG F I+ G
Sbjct: 2880 NPPRFASEDYRGSVVENSEPGELVATLKTLDADISEQNRQVTCYITEGDPLGQFGINQVG 2939
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
E+ I K LDRE
Sbjct: 2940 ------------------DEWRISSKKTLDRE 2953
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P S V+ V+E+ P+GT V+ L+A D D K+++++ G+ +GYF I
Sbjct: 1123 NIPCMSRPVFYPCVQEDVPLGTSVLQLEAWDPDSSS-QGKLTFNLTSGNHMGYFVIH--- 1178
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPL 97
P ++D + K+ +++ + +LD PL
Sbjct: 1179 PFTGVLTTARQLD--RENKDEHVLEVTVLDNGEPPL 1212
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 22/114 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ Y+A V + GT ++ ++A DAD G N+++ YS G+ +F ID
Sbjct: 1540 LHPPHFTQLHYEANVPDTTAPGTELLQVRAMDAD-RGANAEVHYSFLKGNSEDFFNIDTL 1598
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
GT I V + LD + + LT++A D+G+P R
Sbjct: 1599 F--------------GT------ITVAQKLDH-VHHTKHMLTVKAEDQGSPRRH 1631
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY--SVRGGDGLG-YFTID 58
N PVF Y+A + EN P GT VI + A D D G + ++SY SV G + F +D
Sbjct: 2771 NRPVFEADPYKAFLTENMPGGTTVIQVTANDQD-TGSDGQVSYRLSVEPGSNIHELFAVD 2829
Query: 59 NEG 61
NE
Sbjct: 2830 NES 2832
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P S +Y V E+ G ++ + A DAD N++I+YS+ G +
Sbjct: 2985 NSPQCSQLLYTGRVHEDVTPGHFILKVSAVDAD-MDTNAQITYSLHGPGAQEF------- 3036
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
K+DP T + + L LDRE + YNL +A D G
Sbjct: 3037 ----------KLDPHTGE----LTTLTALDRERKDI-YNLVAKATDGG 3069
>gi|194226506|ref|XP_001916261.1| PREDICTED: protocadherin Fat 1 [Equus caballus]
Length = 4588
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 57/112 (50%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A + E+ + VIT+ A DAD P NS I YS+ G+ G FTID
Sbjct: 3331 NTPVFSQDTYTAVISEDAVLEQSVITVMADDADGPS-NSHIHYSIIDGNQGGPFTID--- 3386
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P + + + V KLLDRE GY LT++A D G+PPR
Sbjct: 3387 --------PARGE---------VKVTKLLDRETIS-GYTLTVQASDNGSPPR 3420
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 57/116 (49%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVFS FV + VKE+ PIG+ V+ + A D D G + +I YS+R G G+G F ID E
Sbjct: 1029 LHPPVFSSFVEKGVVKEDVPIGSSVMAVSAHDED-TGRDGEIRYSIRDGSGVGVFKIDEE 1087
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE + Y LT+ A D+G P ++
Sbjct: 1088 TGV--------------------IETSDRLDRE-STSHYWLTVYATDQGVVPLSSF 1122
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N +++Y + GGD LG F I+N
Sbjct: 2916 PRFTAEIYKGTVSEDDPPGGVIAILSTTDADSEEINRQVTYYITGGDPLGQFAIEN---- 2971
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE Y LT+ A D
Sbjct: 2972 --------------IQSEWKVYVKKPLDREKRD-NYLLTITATD 3000
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 56/113 (49%), Gaps = 25/113 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP FS Y TV EN GTL+ ++A DAD G+N KISYS + D G F+I+
Sbjct: 3121 NAPEFSADPYTITVFENTEPGTLLTRVQATDAD-AGLNRKISYSLINSAD--GQFSINEL 3177
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I + K LDRE+ + Y LTL+AVD G P R
Sbjct: 3178 SGI--------------------IQLEKPLDREVQAV-YTLTLKAVDHGLPRR 3209
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F++ Y+A+ EN P+GT V+++ A D D G N ++YS+ + + +
Sbjct: 459 NPPEFTETAYKASFDENVPVGTTVMSVSAVDPD-EGENGYVTYSIANLNHVPFV------ 511
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+NHF G N LD E+ P Y L +RA D G P R
Sbjct: 512 -INHFT--------GAVSTSEN------LDYELMPRVYTLRIRASDWGLPYR 548
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 10 VYQATVKENQPIGTLV-ITLKAADADPPGMNSKISYSVRGGDG-LGYFTIDNEGPLNHFR 67
V+ E P+ T V ++ D DP + +G +G + +I L FR
Sbjct: 245 VHVEQANECAPVITAVTLSPSELDKDPTYAIVTVDDCDQGANGDIASLSIVAGDLLQQFR 304
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
V + PG+K EY I + +D + P GYNLTL+A DKGTPP+
Sbjct: 305 TV--RSSPGSK--EYKIKAVGGIDWDSHPFGYNLTLQAKDKGTPPQ 346
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ IGT V+ + AA D N++I+YS+ G+ G F+ID+
Sbjct: 3226 NPPVFEYREYGATVSEDILIGTEVLQVYAASRDIEA-NAEITYSIISGNEHGKFSIDS-- 3282
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I +++ LD E + Y LT+ A D GTP
Sbjct: 3283 ------------------KTGAIFIIENLDYE-SSHEYYLTVEATDGGTP 3313
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ +G++V+ + A D D G N+++ YS+ G+ FTID
Sbjct: 1558 HAPWFTSSSYEGRVYESAAVGSVVLQVTALDKD-KGKNAEVLYSIESGNIGHSFTID--- 1613
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+ +I K LDR + Y+L ++A DKG+PP
Sbjct: 1614 PILG-----------------SIKTAKELDRS-NQVEYDLMVKATDKGSPP 1646
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKEN P+G+ +I++ A D D G N K+ Y++ GG+ F ID E +
Sbjct: 726 VKENHPVGSNIISMNATDLD-TGFNGKLVYAISGGNEDSCFIIDMETGM----------- 773
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ +L LDRE Y L + D G P + +
Sbjct: 774 ---------LKILSPLDRETTD-KYTLNISVSDLGIPQKAAWH 806
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS +Y ++EN+P+G V+ L D D +++ G+ G F ++ +G
Sbjct: 3436 NAPVFSKRIYSIIIQENKPVGFSVLQLVVTDKDSSHNGPPFFFTIVSGNEDGAFDVNQQG 3495
Query: 62 PL 63
L
Sbjct: 3496 VL 3497
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 50/111 (45%), Gaps = 20/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y AT+ E IGT V+ +KA D+D N ISY + G +
Sbjct: 2279 NPPVFVQQSYAATLSEASVIGTSVVQVKATDSDSEP-NRGISYHMFGNHSKSH------- 2330
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+HF ID T I +++ LD E + + +RAVD G PP
Sbjct: 2331 --DHFH-----IDSSTGL----ISLVRTLDYE-QFQQHKIFVRAVDSGMPP 2369
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P+F +Y+A + E+ G V +KA DAD ++ K+ YS+ G+ F ID+E
Sbjct: 2386 NPPLFDQQIYEAKISEHATHGHFVTCVKAYDADSSDID-KLEYSILSGNDHKNFVIDSE 2443
Score = 39.3 bits (90), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 20/114 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y+ + + P GT VI + A+DAD G N+ ++Y++ D+E
Sbjct: 2592 NAPQFRATKYEVNIGSSAPKGTSVIKVLASDAD-EGSNADVTYAIEA---------DSES 2641
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I K+ KE L L+ E + +RAVD G+PP+E+
Sbjct: 2642 VKENLEI--NKLSGIITTKE----SLIGLENEF----FTFFVRAVDNGSPPKES 2685
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 23/101 (22%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
Y+ V+E+ P GT+++ L+A D D G +S++ YS+ G G F +D
Sbjct: 932 YRVKVREDLPEGTIIMWLEAYDPD-LGQSSQVRYSLL-DHGEGNFDVD------------ 977
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT+RA DKG P
Sbjct: 978 --------KLSGAVRIVQQLDFEKKQV-YNLTVRAKDKGKP 1009
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 21/114 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S+ VY V EN P V+ ++A D D N K++Y + G+ G+F I +
Sbjct: 1135 NAPQTSEPVYYPEVMENSPKDVSVVQIQAFDPDSSS-NDKLTYKITSGNPQGFFAIHPK- 1192
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
T + T +K LDRE + L + D G+PP+ T
Sbjct: 1193 ---------TGLITTTSRK---------LDREQQD-EHILEVTVTDNGSPPKST 1227
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
+++PVF Y+ + EN P+ TLVI +KA D D G+ I+Y +
Sbjct: 2487 LHSPVFLQNEYEVELAENAPVHTLVIEVKATDGD-SGIYGDITYHI 2531
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + Y A VK + +G ++ + A D D G N ++ Y ++ + +F I + G
Sbjct: 2077 NAPVFVNLPYYAVVKVDTVVGHVIRYVTAVDRD-SGRNGEVHYYLK--EHHEHFQIGSSG 2133
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVL 87
++ + + +P T KEY + V+
Sbjct: 2134 EIS----LKKQFEPDTLNKEYLVTVV 2155
>gi|345781801|ref|XP_532835.3| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Canis lupus
familiaris]
Length = 4589
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+++PVFS FV + VKE+ P+G+ V+T+ A D D G + +I YS+R G G+G F ID E
Sbjct: 1029 LHSPVFSSFVEKGVVKEDVPVGSSVMTVSARDED-TGRDGEIRYSIRDGSGVGVFKIDEE 1087
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE + Y LT+ A D+G P ++
Sbjct: 1088 TGV--------------------IETSDRLDRE-STSHYWLTVYAADRGVVPLSSF 1122
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 57/112 (50%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVFS Y A + E+ + VIT+ A D D P NS+I YS+ G N+G
Sbjct: 3332 NSPVFSQDTYTAVISEDALLEQSVITVMADDTDGPS-NSRIRYSIIDG---------NQG 3381
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P IDP + + V KLLDRE GY LT++A D G+PPR
Sbjct: 3382 S-------PFTIDPAKGE----VKVTKLLDRETIS-GYTLTVQASDNGSPPR 3421
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N +++Y + GGD LG F I+N
Sbjct: 2916 PRFTAEIYKGTVSEDDPPGGVIAILSTTDADSEEINRQVAYYITGGDPLGQFAIEN---- 2971
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE Y LT+ A D
Sbjct: 2972 --------------IQNEWKVYVKKPLDREKRD-NYLLTITATD 3000
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 57/119 (47%), Gaps = 24/119 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP FS Y TV EN GT + ++A DAD +N KISYS + D G F+I+
Sbjct: 3121 NAPEFSADPYTITVFENTEPGTPLTRVQATDADAGXLNRKISYSLINSAD--GQFSINEL 3178
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I + K LDRE+ + Y LTL+AVD+G P R T T
Sbjct: 3179 SGI--------------------IQLEKPLDRELQAV-YTLTLKAVDQGLPRRLTATGT 3216
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 52/112 (46%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A+ EN PIGT V+++ A D D G N ++YS+
Sbjct: 459 NPPEFTQTAYKASFDENVPIGTAVMSVSAVDPD-EGENGYVTYSI--------------A 503
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
LNH VP ID T + + LD E+ P Y L +RA D G P R
Sbjct: 504 NLNH---VPFVIDHFTGA----VSTSENLDYELMPRVYTLRIRASDWGLPYR 548
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ IGT V+ + AA D N++I+YS+ G+ G F+ID+
Sbjct: 3227 NPPVFEYREYGATVSEDILIGTEVLQVYAASRDIEA-NAEITYSIISGNEHGKFSIDS-- 3283
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I +++ LD E + Y LT+ A D GTP
Sbjct: 3284 ------------------KTGAIFIIETLDYE-SSHEYYLTVEATDGGTP 3314
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKEN P+G+ +I L A D D G N K+ Y++ GG+ F ID E +
Sbjct: 726 VKENHPVGSNIIVLNATDLD-TGFNGKLVYAISGGNEDSCFIIDMETGM----------- 773
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ +L LDRE Y L + D G P + ++
Sbjct: 774 ---------LKILSPLDRETTD-KYTLNITVSDLGIPQKAAWR 806
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ +G++V+ + A D D G N+++ YS+ G+ FTID
Sbjct: 1558 HAPWFTSSSYEGRVYESAAVGSVVLQVTALDKDK-GKNAEVLYSIESGNIGNSFTID--- 1613
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P T ++ LDR + + Y+L ++A D+G PP
Sbjct: 1614 --------PVLGSIKTARE---------LDRN-SQVEYDLMVKATDQGNPP 1646
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
L F+ V + PG+K EY + + +D + P GYNLTL+A DKGTPP+
Sbjct: 300 LQQFKTV--RSSPGSK--EYKVKAVGGVDWDSHPFGYNLTLQAKDKGTPPQ 346
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 23/101 (22%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
Y+ V+E+ P GT+++ L+A D D G +S++ YS+ G G+F +D
Sbjct: 932 YRVKVREDLPEGTIIMWLEAYDPD-LGQSSQVRYSLL-DHGEGHFDVD------------ 977
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT+RA DKG P
Sbjct: 978 --------KLSGAVRIVQHLDFEKKQV-YNLTVRAKDKGKP 1009
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P+F +Y+A + E+ G V +KA DAD ++ K+ YS+ G+ F ID+E
Sbjct: 2386 NPPLFDQQIYEAKISEHAIHGHFVTCVKAYDADSSDID-KLDYSILSGNDHKNFVIDSE 2443
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y ++EN+P+G V+ L D D +++ G+ G F ++ +G
Sbjct: 3437 NAPVFSKGNYSVIIQENKPVGFSVLQLIVTDKDSSHNGPPFFFTIVSGNDDGAFEVNQQG 3496
Query: 62 PL 63
L
Sbjct: 3497 VL 3498
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 49/111 (44%), Gaps = 20/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y T+ E IGT VI ++A D+D N ISY + G +
Sbjct: 2279 NPPVFVQQSYATTLSEASVIGTSVIQVRATDSDSEP-NRGISYHMFGNHSKSH------- 2330
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+HF ID T I +++ LD E + + +RAVD G PP
Sbjct: 2331 --DHFH-----IDSSTGL----ISLVRALDYEQFQ-QHKIFVRAVDGGMPP 2369
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y+ + N P GT VI + A+DAD G N+ ++Y++ D+E
Sbjct: 2592 NAPQFRATKYEVDIGSNAPKGTSVIKVLASDAD-EGSNADVTYAIEA---------DSES 2641
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I K+ KE L L+ E + +RAVD G+P +E+
Sbjct: 2642 VKENLEI--NKLSGIITTKE----SLIGLENEF----FTFFVRAVDSGSPSKES 2685
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + Y A VK + +G ++ + A D D G N ++ Y ++ + +F I + G
Sbjct: 2077 NAPVFVNLPYYAVVKVDTVVGHVIRHVTAVDRD-SGRNGEVHYYLK--EHHEHFQIGSSG 2133
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVL 87
++ + + +P T KEY I V+
Sbjct: 2134 EIS----LKKQFEPDTLNKEYLITVV 2155
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
+++PVF Y+ + EN P+ TLVI +KA D D G+ I+Y +
Sbjct: 2487 LHSPVFLQSEYEVELAENAPLHTLVIEVKATDGD-SGIYGHITYHI 2531
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N+PV Y+A + EN P G+ VI ++A+D D G N ++ YS+
Sbjct: 2805 NSPVLESNPYEAFIVENLPAGSRVIQIRASDLD-SGTNGQVMYSL 2848
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 21/114 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S+ VY + EN P V+ ++A D D N K+ Y + G+ G+F+I +
Sbjct: 1135 NAPQTSEPVYYPEIIENSPKDVSVVQIEAFDPDSSS-NDKLMYKITSGNPQGFFSIHPK- 1192
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
T + T +K LDRE + L + D G+PP+ T
Sbjct: 1193 ---------TGLITTTSRK---------LDREQQD-EHILEVTVTDNGSPPKST 1227
>gi|332244501|ref|XP_003271412.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4-like [Nomascus
leucogenys]
Length = 4981
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y ++ EN P+G+ V+ DAD G+NS+++YS+ GD LG FT+D G
Sbjct: 1940 NPPIFSLNSYSTSLMENLPVGSTVLVFNVTDADD-GVNSQLTYSIASGDSLGQFTVDKNG 1998
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L VLK LDRE YNL ++ D P + +T +
Sbjct: 1999 ILK---------------------VLKALDRESQSF-YNLVVQVHDLPQIPASRFTSTAQ 2036
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS VY+ + E P G+ V + A D D G+N+ + YS+ G+GLG+F I
Sbjct: 473 PVFSQQVYRVNLSEEAPPGSYVSGISATDGD-SGLNANLRYSIVSGNGLGWFHIS----- 526
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T G LDRE+A L + A D+G P+ +Y
Sbjct: 527 EHSGLVTTGSSGG-------------LDRELAS-QIVLNISARDQGVHPKVSY 565
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ +Y + E PIGT V + A D+D S+ SY + G+ G F+
Sbjct: 3402 PVFTLNIYSVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGAFS------- 3454
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I V LDRE P+ YNL++ AVD GTP
Sbjct: 3455 ---------INPQTGQ----ITVTAELDRETLPI-YNLSVLAVDSGTP 3488
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y+ + EN GT +I + AAD D G N ++ Y + G+ F ID+
Sbjct: 2150 NNPIFAQALYKVEINENTLTGTDIIQVFAADGD-EGTNGQVRYGIVNGNTNQEFRIDSVT 2208
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I V K LDRE P Y+LT++A D+G+ PR
Sbjct: 2209 GA--------------------ITVAKPLDREKTPT-YHLTVQATDRGSTPR 2239
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD P N IS + GG NE HF + +K
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSPAANGNISVQILGG---------NEQ--RHFEVQSSK 413
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK-GTPPRETYKA 118
+ P I V LDRE P YNLT+ D G PP +A
Sbjct: 414 V-PNLSL----IKVASALDRERIP-SYNLTVSVSDNYGAPPGAAVQA 454
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N+ I Y ++ +EG
Sbjct: 246 NPPVFGSSHYQAGVTEDAVVGSSVLQVAAADAD-EGTNADIRYRLQ-----------DEG 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P ++DP T I V + LD E A Y+LT++A+D+G P
Sbjct: 294 -------TPFQMDPETGI----ITVREPLDFE-ARRQYSLTVQAMDRGVP 331
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF Y TV EN P GT VI L A DAD G N+ I+Y+V+ D F ID
Sbjct: 3190 NSPVFLSDDYFPTVLENAPSGTTVIHLNATDAD-SGTNAVIAYTVQSSDS-DLFVID 3244
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF Y+ T+ E++P+ + ++A+D D G N +I+Y++ G+ F I +G
Sbjct: 992 NSPVFDQLSYEVTLSESEPVNSRFFKVQASDKD-SGANGEIAYTIAEGNTGDAFGIFPDG 1050
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D + + +VV DR + PL + + +
Sbjct: 1051 QL----YIKSELDRELQDRYVLMVVAS--DRAVEPLSATVNVTVI 1089
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G N+ + YS+ G + G F+
Sbjct: 1311 NTPSFPKSTLFVDVLENMRIGELVSSVTATDSD-SGDNADLYYSITGTNNHGTFS----- 1364
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1365 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1402
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G VI A D+D G++ + SY + G+ G F +D
Sbjct: 131 NAPVFPDPSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIIRGNEAGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P R Y
Sbjct: 189 -----------ITLNPSGEGAFLHLVSKGGLDREVTP-QYQLLVEVEDKGEPKRRGY 233
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 22/121 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS AT+ E+ +G++V T+ A D D MN I YS+ G+ G F I++
Sbjct: 3085 HTPEFSQSHMSATIPESHSVGSIVRTVSARDRD-AAMNGLIKYSISSGNEEGIFAINSST 3143
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ + + K LD E+ + +T+ A+D G R Y +
Sbjct: 3144 GI--------------------LTLAKALDYELCQ-KHEMTISAIDGGWVARTGYCSVTV 3182
Query: 122 N 122
N
Sbjct: 3183 N 3183
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQAT+ E+ T V+ + A+D D G N I YS+ G+ F ID+
Sbjct: 1206 NAPKFLKDFYQATISESAANLTQVLRVSASDVD-EGNNGLIHYSIIKGNEERQFAIDSTS 1264
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ + LD E P Y+L ++AVD GT P
Sbjct: 1265 G--------------------QVALTGKLDYEATP-AYSLVIQAVDSGTIP 1294
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A +KEN+P G+ + T+ A D D G N + YS+ GD
Sbjct: 685 NSPVFYPVQYFAHIKENEPGGSYITTVSATDPD-LGTNGTVKYSISAGD 732
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP F Y V +N +GT +I + A D G+NS++ Y + + LG F +DN+
Sbjct: 2979 NAPQFLKSKYFTPVTKNVKVGTKLIKVTAIDDKDFGLNSEVEYFISNDNHLGKFKLDND 3037
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVFS Y V EN +G V ++ A+ D +NS ISY + GD G F I+
Sbjct: 789 NPPVFSQVAYSFVVFENVALGYHVGSVSASTMD---LNSNISYLITTGDQKGMFAIN 842
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 48/99 (48%), Gaps = 23/99 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL-NHFRIVPTK 72
+V EN PIGT VI++ A D D +N ++SY TI + P NHF I K
Sbjct: 1428 SVVENIPIGTSVISVTAHDPD-ADINGQLSY-----------TIIQQMPRGNHFTIDEVK 1475
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
GT I +DRE A L + LT++A D+ P
Sbjct: 1476 ---GT------IYTNAEIDREFANL-FELTVKANDQAVP 1504
>gi|344252729|gb|EGW08833.1| Protocadherin Fat 2 [Cricetulus griseus]
Length = 3133
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+++P FS FVYQ V+EN P GT V+ + A D D G++ ++ Y +R G GL F+I+ +
Sbjct: 257 LHSPHFSSFVYQGQVQENSPAGTQVMVVTAQDED-GGLDGELQYFLRAGTGLEAFSINQD 315
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ + L LDRE P Y LT+ AVD+G+ P
Sbjct: 316 TGM--------------------LETLVPLDREFTPY-YWLTVLAVDRGSVP 346
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F+ +Y V EN +G ++T+ A D D P +N+ I+YS+ GG+ LG+FTI+
Sbjct: 2501 HHPRFTHDLYTVRVLENAVVGDTILTVSAFDEDGP-INNAITYSLVGGNQLGHFTIN--- 2556
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+ + V K LD E P Y+L LRA D G PP
Sbjct: 2557 -----------------PKKGKLQVAKALDWEQTP-SYSLKLRATDSGQPP 2589
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P FS VY +V E P T VI L A+D D G N +SY + G D +F I+
Sbjct: 1498 NPPTFSQLVYTTSVSEGLPAQTPVIQLLASDQD-SGKNQDVSYQIVEDGSDVSKFFRIN- 1555
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G+ + + I + LD E A + + +RA+D+G PP
Sbjct: 1556 ----------------GSTGEMFTI---QELDYE-AQQHFQVKVRAMDRGDPP 1588
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+ +V EN G LV TLK DAD N +++ + GD LG F I+ G
Sbjct: 2106 NPPRFASEDYRGSVVENSEPGELVATLKTLDADISEQNRQVTCYITEGDPLGQFGINQVG 2165
Query: 62 PLNHFRIVPTK 72
+ +RI K
Sbjct: 2166 --DEWRISSKK 2174
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P S V+ V+E+ P+GT V+ L+A D D K+++++ G+ +GYF I
Sbjct: 363 NIPCMSRPVFYPCVQEDVPLGTSVLQLEAWDPDSSS-QGKLTFNLTSGNHMGYFVIH--- 418
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPL 97
P ++D + K+ +++ + +LD PL
Sbjct: 419 PFTGVLTTARQLD--RENKDEHVLEVTVLDNGEPPL 452
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 22/114 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ Y+A V + GT ++ ++A DAD G N+++ YS G+ +F ID
Sbjct: 780 LHPPHFTQLHYEANVPDTTAPGTELLQVRAMDAD-RGANAEVHYSFLKGNSEDFFNIDTL 838
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
GT I V + LD + + LT++A D+G+P R
Sbjct: 839 F--------------GT------ITVAQKLDH-VHHTKHMLTVKAEDQGSPRRH 871
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY--SVRGGDGLG-YFTID 58
N PVF Y+A + EN P GT VI + A D D G + ++SY SV G + F +D
Sbjct: 1997 NRPVFEADPYKAFLTENMPGGTTVIQVTANDQD-TGSDGQVSYRLSVEPGSNIHELFAVD 2055
Query: 59 NEG 61
NE
Sbjct: 2056 NES 2058
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P S +Y V E+ G ++ + A DAD N++I+YS+ G +
Sbjct: 2211 NSPQCSQLLYTGRVHEDVTPGHFILKVSAVDAD-MDTNAQITYSLHGPGAQEF------- 2262
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
K+DP T + + L LDRE + YNL +A D G
Sbjct: 2263 ----------KLDPHTGE----LTTLTALDRERKDI-YNLVAKATDGG 2295
>gi|403285083|ref|XP_003933869.1| PREDICTED: protocadherin Fat 1 [Saimiri boliviensis boliviensis]
Length = 4589
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 57/112 (50%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A + E+ + VIT+ A DAD P +NS I YS+ G+ FTID
Sbjct: 3331 NTPVFSQDTYTAVISEDAVLEQSVITVMADDADGP-LNSHIHYSIIDGNRGSSFTID--- 3386
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P + D + V K+LDRE GY LT++A D G+PPR
Sbjct: 3387 --------PVRGD---------VKVTKVLDRETIS-GYTLTVQASDNGSPPR 3420
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 57/116 (49%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVFS FV + VKE P+G+LV+T+ A D D G + +I YS+R G G+G F I E
Sbjct: 1029 LHPPVFSSFVEKGAVKEGAPVGSLVMTVAAQDED-AGRDGEIRYSIRDGSGVGVFRIGEE 1087
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE + Y LT+ A D+G P ++
Sbjct: 1088 TGV--------------------IETSDRLDRE-STSHYWLTVFATDQGVVPLSSF 1122
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G +V L D D +N +++Y + GGD LG F ++N
Sbjct: 2916 PRFTAEIYKGTVSEDDPPGGVVAILSTTDDDSEEINRQVTYFITGGDALGQFAVEN---- 2971
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE Y LT+ A D
Sbjct: 2972 --------------IQNEWKVYVKKPLDREKRD-NYLLTITATD 3000
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 56/113 (49%), Gaps = 25/113 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP FS Y TV EN GTL+ ++A DAD G+N KISYS + D G F+I+
Sbjct: 3121 NAPEFSADPYAITVFENTEPGTLLTRVQATDAD-AGLNRKISYSLIDSAD--GQFSINEL 3177
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I + K LDRE+ + Y L+L+AVD G P R
Sbjct: 3178 SGI--------------------IQLEKPLDRELQAV-YTLSLKAVDHGLPRR 3209
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A EN PIGT V++L A D D G N ++YS+
Sbjct: 459 NPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPD-EGENGYVTYSIAN------------- 504
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+NH VP ID T + + LD E+ P Y L +RA D G P R
Sbjct: 505 -VNH---VPFVIDHFTGA----VSTSENLDYELMPRVYTLRIRASDWGLPYR 548
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKENQP+G+ VI + A D D G N K+ Y+V GG+ F ID E +
Sbjct: 726 VKENQPVGSSVILMNATDLD-TGFNGKLVYAVSGGNEDSCFIIDMETGM----------- 773
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ +L LDRE Y L + D G P + ++
Sbjct: 774 ---------LKILSPLDRETTD-KYTLNITVYDLGIPQKAAWR 806
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ +GT V+ + AA D N++I+YS+ G+ G F+ID+
Sbjct: 3226 NPPVFEYREYGATVSEDILVGTEVLQVYAASRDIEA-NAEITYSIISGNEHGKFSIDS-- 3282
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + Y LT+ A D GTP
Sbjct: 3283 ------------------KTGAVFIIENLDYE-SSHEYYLTVEATDGGTP 3313
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 10 VYQATVKENQPIGTLV-ITLKAADADPPGMNSKISYSVRGGDG-LGYFTIDNEGPLNHFR 67
V+ E P+ T V ++ D DP + +G +G + +I L FR
Sbjct: 245 VHIEQANECAPVITAVTLSPSELDRDPTYAIVTVDDCDQGANGEIASLSIVAGDLLQQFR 304
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
V + PG+K EY + + +D + P GYNLTL+A DKGTPP+
Sbjct: 305 TVRSF--PGSK--EYKVRAIGGVDWDSHPFGYNLTLQAKDKGTPPQ 346
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P+F +Y+A + E+ P G V +KA DAD + K+ YS+ G+ +F ID
Sbjct: 2386 NLPLFEQQIYEARISEHAPHGHFVTCVKAYDADSSDVG-KLQYSILSGNDHKHFVID 2441
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ IG++V+ + A D D G N+++ YS+ G+ +G
Sbjct: 1558 HAPWFTASSYKGRVYESAAIGSVVLQVTALDKD-KGKNAEVLYSIESGN-IG-------- 1607
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F I P T K+ LDR + Y+L ++A DKG+PP
Sbjct: 1608 --NSFMIDPVLGSIKTAKE---------LDRN-NQVEYDLMVKATDKGSPP 1646
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG--GDGLGYFTIDN 59
N PVF+ Y AT+ E IGT V+ ++A D+D N ISY + G +F ID+
Sbjct: 2279 NPPVFAQQSYAATLSEASVIGTSVVQVRATDSDSEP-NRGISYQMFGNLSKSQDHFHIDS 2337
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L I +L+ LD E + + + +RAVD G PP
Sbjct: 2338 STGL--------------------ISLLRTLDYERS-RQHTILVRAVDGGMPP 2369
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS Y ++EN+P+G V+ L D D S+++ G+ F ++ +G
Sbjct: 3436 NAPAFSRGNYSVIIQENKPVGFSVLQLVVTDNDSSHNGPPFSFAIVSGNDERAFEVNQQG 3495
Query: 62 PL 63
L
Sbjct: 3496 VL 3497
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
N+PVF Y+A + EN P G+ VI ++A+D D G N ++ Y
Sbjct: 2805 NSPVFESSPYEAFIVENLPAGSRVIQIRASDVD-SGANGQVVY 2846
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 21/114 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S+ VY + EN P V+ ++A D D + K++Y + G+ G+F+I +
Sbjct: 1135 NAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSS-DDKLTYRITSGNPQGFFSIHPK- 1192
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
T + T +K LDRE + L + D G+PP+ T
Sbjct: 1193 ---------TGLITTTSRK---------LDREQQD-EHILEVTVTDNGSPPKST 1227
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 23/101 (22%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
Y+ V+E+ P GT+++ L+A D D G + ++ YS+ G G F +D
Sbjct: 932 YRVKVREDLPEGTVIMWLEAYDPD-LGQSGQVRYSLV-DHGEGNFDVD------------ 977
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT++A DKG P
Sbjct: 978 --------KLSGAVRIVQQLDFEKKQV-YNLTVKAKDKGKP 1009
>gi|297293336|ref|XP_002804232.1| PREDICTED: protocadherin Fat 4-like isoform 1 [Macaca mulatta]
Length = 4981
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y ++ EN P+G+ V+ DAD G+NS+++YS+ GD LG FT+D G
Sbjct: 1940 NPPIFSLNSYSTSLMENLPVGSTVLVFNVTDADD-GINSELAYSIASGDSLGQFTVDKNG 1998
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L VLK LDRE YNL ++ D P + +T +
Sbjct: 1999 LLK---------------------VLKALDRESQSF-YNLVVQVHDLPQIPASRFTSTAQ 2036
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS VY+ + E P G+ V + A D D G+N+ + YS+ G+GLG+F I
Sbjct: 473 PVFSQQVYRVNLSEEAPPGSYVSGISATDGD-SGLNANLRYSIVSGNGLGWFHIS----- 526
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T G LDRE+A L + A D+G P+ +Y
Sbjct: 527 EHSGLVTTGAAGG-------------LDRELAS-QIVLNISARDQGVHPKVSY 565
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ +Y + E PIGT V + A D+D S+ SY + G+ G F+
Sbjct: 3402 PVFTLNIYSVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGAFS------- 3454
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I + LDRE P+ YNL++ AVD GTP
Sbjct: 3455 ---------INPQTGQ----ITITAELDRETLPI-YNLSVLAVDSGTP 3488
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y+ + EN GT +I + AAD D G N ++ Y + G+ F ID+
Sbjct: 2150 NNPIFAQALYKVEINENTLTGTDIIQVFAADGD-EGTNGQVRYGIVNGNTNQEFRIDSVT 2208
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I V K LDRE P Y+LT++A D+G+ PR
Sbjct: 2209 GA--------------------ITVAKPLDREKTPT-YHLTVQAADRGSTPR 2239
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N+ I Y ++ +EG
Sbjct: 246 NPPVFGSSHYQAGVPEDAVVGSSVLQVAAADAD-EGTNADIRYRLQ-----------DEG 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P ++DP T I V + LD E A Y+LT++A+D+G P
Sbjct: 294 -------TPFQMDPETGL----ITVREPLDFE-ARRQYSLTVQAMDRGVP 331
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 47/107 (43%), Gaps = 18/107 (16%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD N IS + GG NE HF + +K
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSSAANGNISVQILGG---------NEQ--RHFEVQSSK 413
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK-GTPPRETYKA 118
+ P I V LDRE P YNLT+ D G PP +A
Sbjct: 414 V-PNLSL----IKVASALDRERIP-SYNLTVSVSDNYGAPPGAAVQA 454
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF Y+ T+ E++P+ + ++A+D D G N +I+Y++ G+ F I +G
Sbjct: 992 NSPVFDQLSYEVTLSESEPVNSRFFKVQASDKD-SGANGEIAYTIAEGNTGDAFGIFPDG 1050
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D + + +VV DR + PL + + +
Sbjct: 1051 QL----YIKSELDRELQDRYVLMVVAS--DRAVEPLSATVNVTVI 1089
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 50/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQAT+ E+ T V+ + A+D D G N I YS+ G+ F ID
Sbjct: 1206 NAPKFLKDFYQATISESAANLTQVLRVSASDVD-EGNNGLIHYSIIKGNEERQFAID--- 1261
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I G + ++ LD E P Y+L ++AVD GT P
Sbjct: 1262 -----------ITSG------QVALIGKLDYEATP-AYSLVIQAVDSGTIP 1294
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF Y TV EN P GT VI L A DAD G N+ I+Y+V+ D F +D
Sbjct: 3190 NSPVFLSDDYFPTVLENAPSGTTVIHLNATDAD-SGTNAVIAYTVQSSDS-DLFVVD 3244
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G N+ + YS+ G + G F+
Sbjct: 1311 NTPSFPKSTLFVDVLENMRIGELVSSVTATDSD-SGDNADLYYSITGTNNHGTFS----- 1364
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1365 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1402
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G VI A D+D G++ + SY + G+ G F +D
Sbjct: 131 NAPVFPDPSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIIRGNEAGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P R Y
Sbjct: 189 -----------ITLNPSGEGAFLHLVSKGGLDREVTP-QYQLLVEVEDKGEPKRRGY 233
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 22/121 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS AT+ E+ +G++V T+ A D D MN I YS+ G+ G F I++
Sbjct: 3085 HTPEFSQSHMSATIPESHSVGSIVRTVSARDRD-AAMNGLIKYSISSGNEEGIFAINSST 3143
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ + + K LD E+ + +T+ A+D G R Y +
Sbjct: 3144 GI--------------------LTLAKALDYELCQ-KHEMTISAIDGGWVARTGYCSVTV 3182
Query: 122 N 122
N
Sbjct: 3183 N 3183
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A +KEN+P G+ + T+ A D D G N + YS+ GD
Sbjct: 685 NSPVFYPVQYFAHIKENEPGGSYITTVSATDPD-LGTNGTVKYSISAGD 732
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP F Y V +N +GT +I + A D G+NS++ Y + + LG F +DN+
Sbjct: 2979 NAPQFLKSKYFTPVTKNVKVGTKLIKVIAIDDKDFGLNSEVEYFISNDNHLGKFKLDND 3037
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVF Y V EN +G V ++ A+ D +NS ISY + GD G F I+
Sbjct: 789 NPPVFGQVAYSFVVFENVALGYHVGSVSASTMD---LNSNISYLITTGDQKGMFAIN 842
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 23/99 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL-NHFRIVPTK 72
++ EN PIGT VI++ A D D +N ++SY TI + P NHF I K
Sbjct: 1428 SIVENIPIGTSVISVTAHDPD-ADINGQLSY-----------TIIQQMPRGNHFTIDEVK 1475
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
GT I +DRE A L + LT++A D+ P
Sbjct: 1476 ---GT------IYTNAEIDREFANL-FELTVKANDQAVP 1504
>gi|395845723|ref|XP_003795574.1| PREDICTED: protocadherin Fat 4 isoform 1 [Otolemur garnettii]
Length = 4982
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 53/106 (50%), Gaps = 23/106 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y ++ EN P+G+ V+ DAD G+NS+++YS+ GD LG FTID +G
Sbjct: 1940 NPPIFSLNSYSTSLMENLPLGSTVLVFNVTDADD-GINSQLAYSIASGDSLGQFTIDKDG 1998
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
L VLK LDRE YNL ++ D
Sbjct: 1999 VLK---------------------VLKALDRESQSF-YNLVVQVHD 2022
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y+ + EN GT +I + AAD D G N ++ Y + GG+ F ID+
Sbjct: 2150 NNPIFAQALYKVEINENTLTGTDIIQVFAADGD-EGTNGQVRYGIVGGNANQEFRIDSVT 2208
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I V K LDRE P Y LT++A D+G+ PR
Sbjct: 2209 GA--------------------ITVAKPLDREKTPT-YLLTVQATDRGSTPR 2239
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+FS +Y + E P+GT V + A D+D S+ SY + G+ G F+
Sbjct: 3404 PIFSLNIYSVQISEGVPVGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGAFS------- 3456
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I V LDRE P+ YNL++ AVD GTP
Sbjct: 3457 ---------INPQTGQ----ITVTAELDRETLPI-YNLSVLAVDSGTP 3490
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ VY+ + E P G+ V + A D D G+N+ + YS+ G+GLG+F I
Sbjct: 473 PVFAQQVYRVNLSEEAPPGSYVCGVSATDGDS-GLNANLRYSIVSGNGLGWFHIS----- 526
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T G L+RE+A L + A D+G P+ +Y
Sbjct: 527 EHSGLVTTGATGG-------------LNRELAS-QIVLNISARDQGVHPKFSY 565
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD P N IS + GG NE HF + +K
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSPAANGNISVQILGG---------NEQ--RHFEVQSSK 413
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK-GTPPRETYKA 118
+ P I V LDRE P YNLT+ D G PP +A
Sbjct: 414 V-PNLSL----IKVASALDRERIP-SYNLTVSVSDNYGAPPAAAVQA 454
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N+ I Y ++ +EG
Sbjct: 246 NPPVFGSSHYQAGVPEDAVVGSSVLQVAAADAD-EGTNADIRYRLQ-----------DEG 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P ++DP T I V + LD E A Y+LTL+A+D+G P
Sbjct: 294 -------TPFQMDPETGL----ITVREPLDFE-ARRQYSLTLQAMDRGVP 331
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF Y TV EN P GT VI L A DAD G N+ I+Y+V+ D F ID
Sbjct: 3192 NSPVFLSDEYFPTVLENAPSGTTVIHLNATDAD-SGTNAVIAYTVQSSDS-DLFVID 3246
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF Y+ T+ E++P+ + ++A+D D G N +I+Y++ G+ F I +G
Sbjct: 992 NSPVFDQLSYEVTLSESEPVNSRFFKVQASDKD-SGANGEIAYTIAEGNTGDAFGIFPDG 1050
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D + + +VV DR + PL + + +
Sbjct: 1051 QL----YIKSELDRELQDRYVLLVV--AFDRAVEPLSATVNVTVI 1089
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G N+ + YS+ G + G F+
Sbjct: 1311 NTPSFPKSTLFVDVLENMRIGELVSSVTATDSD-SGDNADLHYSITGTNNHGTFS----- 1364
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1365 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1402
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G VI A D+D G++ + SY + G+ G F +D
Sbjct: 131 NAPVFPDPSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIIQGNEAGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P R Y
Sbjct: 189 -----------ITLNPSGEGAFLHLVSKGGLDREVTP-QYQLLVEVEDKGEPKRRGY 233
Score = 42.4 bits (98), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 22/109 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQAT+ E+ T V+ + A+D D G N I YS+ G+ F+ID+
Sbjct: 1206 NAPRFLKDFYQATISESAANLTQVLRVSASDVD-EGNNGLIHYSIIKGNEERQFSIDSSS 1264
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGT 110
+ ++ LD E P Y+L ++AVD GT
Sbjct: 1265 G--------------------QVALIGKLDYETTP-AYSLIIQAVDSGT 1292
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP F Y V +N +GT +I + A D G+NS++ Y + + LG F +DN+
Sbjct: 2981 NAPQFLTIKYFTPVTKNVKVGTKLIKVTAVDDKDFGLNSEVEYFISNENHLGKFKLDND 3039
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVFS Y V EN +G V ++ A+ D +NS ISY + GD G FTI+
Sbjct: 789 NPPVFSQAAYSFVVFENVALGYQVGSVSASTMD---LNSNISYLITTGDQKGMFTIN 842
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 22/121 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS AT+ E+ IG +V T+ A D D MN I YS+ G+ G F +++
Sbjct: 3087 HTPEFSQSHMSATIPESHSIGAIVRTVSARDRD-TAMNGLIRYSISSGNEEGIFALNSST 3145
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ + + K LD E+ + + + AVD G R Y +
Sbjct: 3146 GI--------------------LTLAKALDYELCQ-KHEMMISAVDGGWVARTGYCSVTV 3184
Query: 122 N 122
N
Sbjct: 3185 N 3185
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A ++EN+P G+ + T+ A D D G N + YS+ GD
Sbjct: 685 NSPVFYPVQYFAHIQENEPGGSYITTVSATDPD-LGPNGTVKYSISAGD 732
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 43/108 (39%), Gaps = 22/108 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+F Y V EN I A D G NSKISY + GG+ FT+ G L
Sbjct: 2257 PIFELSPYAVNVPENLETLPRTILQVVARDDDQGSNSKISYVLFGGNEDNAFTLSASGEL 2316
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
V++ LDRE + + LT+ A D G+P
Sbjct: 2317 R---------------------VIQSLDRE-SKEQFVLTVTATDSGSP 2342
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 4 PVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
PVFS Y +V EN P GT ++ L+A D D G N + +S++ + E
Sbjct: 580 PVFSQPEGYDVSVVENAPTGTELLILRATDRD-LGDNGTVGFSLQ----------EAETD 628
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
FR +DP + + + + LDRE Y+L + A D G+PP+ +
Sbjct: 629 QRSFR-----LDPVSGR----LSTVSSLDREEQAF-YSLLVVATDLGSPPQSS 671
>gi|297293338|ref|XP_002804233.1| PREDICTED: protocadherin Fat 4-like isoform 2 [Macaca mulatta]
Length = 4981
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y ++ EN P+G+ V+ DAD G+NS+++YS+ GD LG FT+D G
Sbjct: 1940 NPPIFSLNSYSTSLMENLPVGSTVLVFNVTDADD-GINSELAYSIASGDSLGQFTVDKNG 1998
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L VLK LDRE YNL ++ D P + +T +
Sbjct: 1999 LLK---------------------VLKALDRESQSF-YNLVVQVHDLPQIPASRFTSTAQ 2036
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS VY+ + E P G+ V + A D D G+N+ + YS+ G+GLG+F I
Sbjct: 473 PVFSQQVYRVNLSEEAPPGSYVSGISATDGD-SGLNANLRYSIVSGNGLGWFHIS----- 526
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T G LDRE+A L + A D+G P+ +Y
Sbjct: 527 EHSGLVTTGAAGG-------------LDRELAS-QIVLNISARDQGVHPKVSY 565
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ +Y + E PIGT V + A D+D S+ SY + G+ G F+
Sbjct: 3402 PVFTLNIYSVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGAFS------- 3454
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I + LDRE P+ YNL++ AVD GTP
Sbjct: 3455 ---------INPQTGQ----ITITAELDRETLPI-YNLSVLAVDSGTP 3488
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y+ + EN GT +I + AAD D G N ++ Y + G+ F ID+
Sbjct: 2150 NNPIFAQALYKVEINENTLTGTDIIQVFAADGD-EGTNGQVRYGIVNGNTNQEFRIDSVT 2208
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I V K LDRE P Y+LT++A D+G+ PR
Sbjct: 2209 GA--------------------ITVAKPLDREKTPT-YHLTVQAADRGSTPR 2239
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N+ I Y ++ +EG
Sbjct: 246 NPPVFGSSHYQAGVPEDAVVGSSVLQVAAADAD-EGTNADIRYRLQ-----------DEG 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P ++DP T I V + LD E A Y+LT++A+D+G P
Sbjct: 294 -------TPFQMDPETGL----ITVREPLDFE-ARRQYSLTVQAMDRGVP 331
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 47/107 (43%), Gaps = 18/107 (16%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD N IS + GG NE HF + +K
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSSAANGNISVQILGG---------NEQ--RHFEVQSSK 413
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK-GTPPRETYKA 118
+ P I V LDRE P YNLT+ D G PP +A
Sbjct: 414 V-PNLSL----IKVASALDRERIP-SYNLTVSVSDNYGAPPGAAVQA 454
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF Y+ T+ E++P+ + ++A+D D G N +I+Y++ G+ F I +G
Sbjct: 992 NSPVFDQLSYEVTLSESEPVNSRFFKVQASDKD-SGANGEIAYTIAEGNTGDAFGIFPDG 1050
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D + + +VV DR + PL + + +
Sbjct: 1051 QL----YIKSELDRELQDRYVLMVVAS--DRAVEPLSATVNVTVI 1089
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 50/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQAT+ E+ T V+ + A+D D G N I YS+ G+ F ID
Sbjct: 1206 NAPKFLKDFYQATISESAANLTQVLRVSASDVD-EGNNGLIHYSIIKGNEERQFAID--- 1261
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I G + ++ LD E P Y+L ++AVD GT P
Sbjct: 1262 -----------ITSG------QVALIGKLDYEATP-AYSLVIQAVDSGTIP 1294
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF Y TV EN P GT VI L A DAD G N+ I+Y+V+ D F +D
Sbjct: 3190 NSPVFLSDDYFPTVLENAPSGTTVIHLNATDAD-SGTNAVIAYTVQSSDS-DLFVVD 3244
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G N+ + YS+ G + G F+
Sbjct: 1311 NTPSFPKSTLFVDVLENMRIGELVSSVTATDSD-SGDNADLYYSITGTNNHGTFS----- 1364
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1365 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1402
Score = 42.0 bits (97), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G VI A D+D G++ + SY + G+ G F +D
Sbjct: 131 NAPVFPDPSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIIRGNEAGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P R Y
Sbjct: 189 -----------ITLNPSGEGAFLHLVSKGGLDREVTP-QYQLLVEVEDKGEPKRRGY 233
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 22/121 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS AT+ E+ +G++V T+ A D D MN I YS+ G+ G F I++
Sbjct: 3085 HTPEFSQSHMSATIPESHSVGSIVRTVSARDRD-AAMNGLIKYSISSGNEEGIFAINSST 3143
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ + + K LD E+ + +T+ A+D G R Y +
Sbjct: 3144 GI--------------------LTLAKALDYELCQ-KHEMTISAIDGGWVARTGYCSVTV 3182
Query: 122 N 122
N
Sbjct: 3183 N 3183
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A +KEN+P G+ + T+ A D D G N + YS+ GD
Sbjct: 685 NSPVFYPVQYFAHIKENEPGGSYITTVSATDPD-LGTNGTVKYSISAGD 732
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP F Y V +N +GT +I + A D G+NS++ Y + + LG F +DN+
Sbjct: 2979 NAPQFLKSKYFTPVTKNVKVGTKLIKVIAIDDKDFGLNSEVEYFISNDNHLGKFKLDND 3037
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVF Y V EN +G V ++ A+ D +NS ISY + GD G F I+
Sbjct: 789 NPPVFGQVAYSFVVFENVALGYHVGSVSASTMD---LNSNISYLITTGDQKGMFAIN 842
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 23/99 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL-NHFRIVPTK 72
++ EN PIGT VI++ A D D +N ++SY TI + P NHF I K
Sbjct: 1428 SIVENIPIGTSVISVTAHDPD-ADINGQLSY-----------TIIQQMPRGNHFTIDEVK 1475
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
GT I +DRE A L + LT++A D+ P
Sbjct: 1476 ---GT------IYTNAEIDREFANL-FELTVKANDQAVP 1504
>gi|431902348|gb|ELK08849.1| Protocadherin Fat 1 [Pteropus alecto]
Length = 4588
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 58/116 (50%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+N PVFS FV + VKE+ PIG+ V+T+ A D D G + ++ YS+R G G+G F ID E
Sbjct: 1029 LNPPVFSSFVEKGIVKEDVPIGSSVMTVSAHDED-TGRDGEVRYSIRDGSGVGVFKIDEE 1087
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE + Y LT+ A D+G P ++
Sbjct: 1088 TGV--------------------IETSDRLDRE-STSHYWLTVYATDQGVVPLSSF 1122
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 56/112 (50%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A V E+ + VIT+ A DAD P NS I YS+ G N+G
Sbjct: 3331 NTPVFSQDTYTAVVSEDAVLEQSVITVMADDADGPS-NSHIHYSIIDG---------NQG 3380
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P IDP + + V KLLDRE GY LT++A D G+PPR
Sbjct: 3381 S-------PFTIDPARGE----VRVTKLLDRETIS-GYTLTIQASDNGSPPR 3420
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N +++Y + GGD LG F I+N
Sbjct: 2916 PRFTAEIYKGTVSEDDPPGGVIAILSTTDADSEEINRQVTYYITGGDPLGQFAIEN---- 2971
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE Y LT+ A D
Sbjct: 2972 --------------IQNEWKVYVKKPLDREKRD-NYLLTITATD 3000
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 58/119 (48%), Gaps = 25/119 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP FS Y TV EN GT + ++A DAD G+N KISYS + D G F+I+
Sbjct: 3121 NAPEFSADPYTITVFENTEPGTPLTRVQATDAD-AGLNRKISYSLINSAD--GQFSINEL 3177
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I + K LDRE+ + Y LTL+AVD+G P R T T
Sbjct: 3178 SGI--------------------IQLEKPLDRELQSV-YTLTLKAVDQGLPRRLTATGT 3215
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 46/90 (51%), Gaps = 19/90 (21%)
Query: 25 VITLKAADADPPGMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYN 83
VIT+ D G N +I S S+ GD L FR V + PG+K EY
Sbjct: 275 VITVDDCDQ---GANGEIASLSIVAGD-----------LLQQFRTV--RSSPGSK--EYK 316
Query: 84 IVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ + +D + P GYNLTL+A DKGTPPR
Sbjct: 317 VKAVGGIDWDSYPFGYNLTLQAKDKGTPPR 346
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A+ EN PIGT V+++ A D D G N ++YS+ + + +
Sbjct: 459 NPPEFTQTAYKASFDENVPIGTTVMSVSAVDPD-EGENGYVTYSIANLNPVPFV------ 511
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+NHF G N LD E+ P Y L +RA D G P R
Sbjct: 512 -INHF--------TGAVSTSEN------LDYELMPRVYTLRVRASDWGLPYR 548
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ +G++V+ + A D D G N+++ YS+ G+ FTID
Sbjct: 1558 HAPWFTSSSYEGRVYESAAVGSVVLQVTALDKD-RGKNAEVVYSIESGNIGNSFTID--- 1613
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+ +I K LDR + + Y+L ++A DKG PP
Sbjct: 1614 PILG-----------------SIKTAKELDRS-SQVEYDLMVKATDKGNPP 1646
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKEN+P+G+ +I + A D D G N K+ Y++ GG+ F ID E +
Sbjct: 726 VKENRPLGSNIIFMNATDPD-TGFNGKLVYAISGGNEDSCFIIDMETGM----------- 773
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ +L LDRE Y L + A D G P + +
Sbjct: 774 ---------LKILSPLDRETTD-KYTLNITAFDLGMPQKAAWH 806
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ GT ++ + AA D N++I+YS+ G+ G F+ID+
Sbjct: 3226 NPPVFEYREYGTTVSEDILTGTEILQVYAASRDIEA-NAEITYSIISGNEHGKFSIDS-- 3282
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I +++ LD E + Y LT+ A D GTP
Sbjct: 3283 ------------------KTGAIFIIENLDYE-SSHEYYLTVEATDGGTP 3313
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P+F +Y+A + E+ G V +KA DAD ++ K+ YS+ G+ F ID+E
Sbjct: 2386 NPPLFDQQLYEAKISEHATHGHFVTCVKAHDADSSDID-KLEYSILSGNDHKNFAIDSE 2443
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 50/111 (45%), Gaps = 20/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y AT+ E IGT VI ++A D+D N ISY + G +
Sbjct: 2279 NPPVFVQQSYVATLSEASVIGTSVIQVRATDSDSEP-NRGISYHMFGNHSKSH------- 2330
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+HF ID T I +++ LD E + + +RAVD G PP
Sbjct: 2331 --DHFH-----IDGSTGV----ISLVRTLDYEQFQ-QHRIFVRAVDGGMPP 2369
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 23/101 (22%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
Y+ V+E+ P GT+++ L+A D D G +S++ YS+ G G F +D
Sbjct: 932 YRVKVREDLPEGTIIMWLEAYDPD-LGQSSQVRYSLL-DHGEGNFDVD------------ 977
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT+RA DKG P
Sbjct: 978 --------KLSGAVRIVQQLDFEKKQV-YNLTVRAKDKGKP 1009
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 55/114 (48%), Gaps = 10/114 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS Y ++EN+P+G V+ L D D +++ G+ F ++ +G
Sbjct: 3436 NAPIFSRGNYSVIIQENKPVGFSVLQLVVTDKDSSHNGPPFFFTIVNGNDDNAFEVNQQG 3495
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR---EIAPLGYNLTLRAVDKGTPP 112
L V K+ K++ ++ +K+ D +++ L Y + +R +++ P
Sbjct: 3496 VLLTSAAVRKKV------KDHYLLHVKVADNGKPQLSSLTY-IDIRVIEESIYP 3542
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
+++PVF Y+A + EN P+ TLVI +KA D D G+ I+Y +
Sbjct: 2487 LHSPVFLQNEYEAELAENAPLHTLVIEVKATDGD-SGIYGHITYHI 2531
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 21/114 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S+ VY V EN P V+ ++A D D N K++Y + G+ G+F+I +
Sbjct: 1135 NAPQTSEPVYYPEVMENSPKDVSVVQIEAFDPDSSS-NDKLTYKITSGNPQGFFSIHPK- 1192
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
T + T +K LDRE + L + D G+PP+ T
Sbjct: 1193 ---------TGLITTTSRK---------LDREQQD-EHILEVTVTDNGSPPKST 1227
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N+PV Y+A + ENQP G+ VI ++A+D D G N ++ YS+
Sbjct: 2805 NSPVLESNPYEAFIVENQPGGSRVIQIRASDLD-SGTNGQVMYSL 2848
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y+ + + P GT VI + A+DAD G N+ ++Y++ D+E
Sbjct: 2592 NAPQFRATKYEVNIGSSAPKGTSVIKVLASDAD-EGSNADVTYAIEA---------DSES 2641
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I K+ KE L L+ E + +RAVD G+P +E+
Sbjct: 2642 VKENLEI--NKLSGIITTKE----SLIGLENEF----FTFFVRAVDNGSPSKES 2685
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + Y A VK + +G + ++ A D D G N ++ Y ++ + +F I G
Sbjct: 2077 NAPVFVNLPYYAVVKVDTAVGHTIRSVTAVDRD-SGRNGEVHYYLK--EHHEHFQIGPSG 2133
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVL 87
++ + + +P T KEY + V+
Sbjct: 2134 EIS----LKKQFEPDTLNKEYLVTVV 2155
>gi|395845725|ref|XP_003795575.1| PREDICTED: protocadherin Fat 4 isoform 2 [Otolemur garnettii]
Length = 4981
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 53/106 (50%), Gaps = 23/106 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y ++ EN P+G+ V+ DAD G+NS+++YS+ GD LG FTID +G
Sbjct: 1940 NPPIFSLNSYSTSLMENLPLGSTVLVFNVTDADD-GINSQLAYSIASGDSLGQFTIDKDG 1998
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
L VLK LDRE YNL ++ D
Sbjct: 1999 VLK---------------------VLKALDRESQSF-YNLVVQVHD 2022
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y+ + EN GT +I + AAD D G N ++ Y + GG+ F ID+
Sbjct: 2150 NNPIFAQALYKVEINENTLTGTDIIQVFAADGD-EGTNGQVRYGIVGGNANQEFRIDSVT 2208
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I V K LDRE P Y LT++A D+G+ PR
Sbjct: 2209 GA--------------------ITVAKPLDREKTPT-YLLTVQATDRGSTPR 2239
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+FS +Y + E P+GT V + A D+D S+ SY + G+ G F+
Sbjct: 3402 PIFSLNIYSVQISEGVPVGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGAFS------- 3454
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I V LDRE P+ YNL++ AVD GTP
Sbjct: 3455 ---------INPQTGQ----ITVTAELDRETLPI-YNLSVLAVDSGTP 3488
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ VY+ + E P G+ V + A D D G+N+ + YS+ G+GLG+F I
Sbjct: 473 PVFAQQVYRVNLSEEAPPGSYVCGVSATDGDS-GLNANLRYSIVSGNGLGWFHIS----- 526
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T G L+RE+A L + A D+G P+ +Y
Sbjct: 527 EHSGLVTTGATGG-------------LNRELAS-QIVLNISARDQGVHPKFSY 565
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD P N IS + GG NE HF + +K
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSPAANGNISVQILGG---------NEQ--RHFEVQSSK 413
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK-GTPPRETYKA 118
+ P I V LDRE P YNLT+ D G PP +A
Sbjct: 414 V-PNLSL----IKVASALDRERIP-SYNLTVSVSDNYGAPPAAAVQA 454
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N+ I Y ++ +EG
Sbjct: 246 NPPVFGSSHYQAGVPEDAVVGSSVLQVAAADAD-EGTNADIRYRLQ-----------DEG 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P ++DP T I V + LD E A Y+LTL+A+D+G P
Sbjct: 294 -------TPFQMDPETGL----ITVREPLDFE-ARRQYSLTLQAMDRGVP 331
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF Y TV EN P GT VI L A DAD G N+ I+Y+V+ D F ID
Sbjct: 3190 NSPVFLSDEYFPTVLENAPSGTTVIHLNATDAD-SGTNAVIAYTVQSSDS-DLFVID 3244
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF Y+ T+ E++P+ + ++A+D D G N +I+Y++ G+ F I +G
Sbjct: 992 NSPVFDQLSYEVTLSESEPVNSRFFKVQASDKD-SGANGEIAYTIAEGNTGDAFGIFPDG 1050
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D + + +VV DR + PL + + +
Sbjct: 1051 QL----YIKSELDRELQDRYVLLVV--AFDRAVEPLSATVNVTVI 1089
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G N+ + YS+ G + G F+
Sbjct: 1311 NTPSFPKSTLFVDVLENMRIGELVSSVTATDSD-SGDNADLHYSITGTNNHGTFS----- 1364
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1365 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1402
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G VI A D+D G++ + SY + G+ G F +D
Sbjct: 131 NAPVFPDPSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIIQGNEAGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P R Y
Sbjct: 189 -----------ITLNPSGEGAFLHLVSKGGLDREVTP-QYQLLVEVEDKGEPKRRGY 233
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 22/109 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQAT+ E+ T V+ + A+D D G N I YS+ G+ F+ID+
Sbjct: 1206 NAPRFLKDFYQATISESAANLTQVLRVSASDVD-EGNNGLIHYSIIKGNEERQFSIDSSS 1264
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGT 110
+ ++ LD E P Y+L ++AVD GT
Sbjct: 1265 G--------------------QVALIGKLDYETTP-AYSLIIQAVDSGT 1292
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP F Y V +N +GT +I + A D G+NS++ Y + + LG F +DN+
Sbjct: 2979 NAPQFLTIKYFTPVTKNVKVGTKLIKVTAVDDKDFGLNSEVEYFISNENHLGKFKLDND 3037
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVFS Y V EN +G V ++ A+ D +NS ISY + GD G FTI+
Sbjct: 789 NPPVFSQAAYSFVVFENVALGYQVGSVSASTMD---LNSNISYLITTGDQKGMFTIN 842
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 22/121 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS AT+ E+ IG +V T+ A D D MN I YS+ G+ G F +++
Sbjct: 3085 HTPEFSQSHMSATIPESHSIGAIVRTVSARDRD-TAMNGLIRYSISSGNEEGIFALNSST 3143
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ + + K LD E+ + + + AVD G R Y +
Sbjct: 3144 GI--------------------LTLAKALDYELCQ-KHEMMISAVDGGWVARTGYCSVTV 3182
Query: 122 N 122
N
Sbjct: 3183 N 3183
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A ++EN+P G+ + T+ A D D G N + YS+ GD
Sbjct: 685 NSPVFYPVQYFAHIQENEPGGSYITTVSATDPD-LGPNGTVKYSISAGD 732
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 43/108 (39%), Gaps = 22/108 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+F Y V EN I A D G NSKISY + GG+ FT+ G L
Sbjct: 2257 PIFELSPYAVNVPENLETLPRTILQVVARDDDQGSNSKISYVLFGGNEDNAFTLSASGEL 2316
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
V++ LDRE + + LT+ A D G+P
Sbjct: 2317 R---------------------VIQSLDRE-SKEQFVLTVTATDSGSP 2342
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 4 PVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
PVFS Y +V EN P GT ++ L+A D D G N + +S++ + E
Sbjct: 580 PVFSQPEGYDVSVVENAPTGTELLILRATDRD-LGDNGTVGFSLQ----------EAETD 628
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
FR +DP + + + + LDRE Y+L + A D G+PP+ +
Sbjct: 629 QRSFR-----LDPVSGR----LSTVSSLDREEQAF-YSLLVVATDLGSPPQSS 671
>gi|327273774|ref|XP_003221655.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1-like [Anolis
carolinensis]
Length = 4585
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F +FV + V E+ PIG+LV+T+ A D D G + ++ YS+R G G+G FTID E
Sbjct: 1030 LHPPRFPNFVDKGFVNEDVPIGSLVMTVSAFDED-TGRDGEVRYSIRDGSGVGIFTIDEE 1088
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
GT I + LLDRE Y LT+ A D+G P ++
Sbjct: 1089 --------------KGT------ITTVDLLDRETTS-HYWLTVYAADQGVVPLSSF 1123
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 56/111 (50%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A + E+ + V+T+ AAD+D P +NS I YS+ G+ FTID
Sbjct: 3330 NTPVFSQDTYTAVISEDAEVEQSVVTVMAADSDGP-LNSHIRYSIIDGNQENQFTID--- 3385
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PT + + V KLLDRE GY LT++A D G PP
Sbjct: 3386 --------PTLGE---------VKVAKLLDREKIS-GYTLTVQASDNGNPP 3418
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ +Y+ TV E+ P G +V L DAD +N ++SY + GGD LG F ++N
Sbjct: 2915 NPPRFTAEIYKGTVSEDDPTGGVVAILSTTDADSEDVNRQVSYFITGGDPLGQFAVEN-- 2972
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE+ Y L + A D
Sbjct: 2973 ----------------IQNEWKVYVRKPLDREVKD-NYLLNITATD 3001
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 10 VYQATVKENQPIGT-LVITLKAADADPPGMNSKISYSVRGGDG-LGYFTIDNEGPLNHFR 67
VY E+ P+ T L +T D DP + G +G + +I PL FR
Sbjct: 246 VYIEQANEHAPVITALTLTPSELDNDPVYAVVTVEDRDHGSNGEIASLSIVAGDPLQQFR 305
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
V T PG KEY I + +D E P GYNLTL+A DKG+PP+
Sbjct: 306 AVRTF--PG--GKEYKIRAVGSIDWESQPFGYNLTLQAKDKGSPPK 347
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 22/117 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F+ Y+A+ EN PIGT V+ + A D D G N ++YS+ + + +
Sbjct: 460 HSPEFTQMSYKASFDENVPIGTSVMRVNAKDLD-EGENGYVTYSIANINPVPFV------ 512
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
+NHF V I + +D E+ P Y L +RA D GTP R +A
Sbjct: 513 -INHFTGV--------------ISTSENMDYELMPRVYKLRVRASDWGTPYRREVEA 554
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF Y ATVK + +G ++ + A D D G N ++ YS++ + G+F I N G
Sbjct: 2078 NAPVFVSLPYYATVKIDMEVGQVIRRVTAVDKD-IGRNGEVHYSLK--EDYGHFQIGNTG 2134
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVL 87
++ + DP T +EY I V+
Sbjct: 2135 EIS----LKKPFDPDTLNEEYIITVV 2156
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P+F++ Y AT+ E IGT V+ + A DAD G N ISY + + YF ID+
Sbjct: 2280 NPPLFTEQFYTATLSEAAVIGTSVVRVWATDAD-SGTNRGISYHLVENNSNSHEYFHIDS 2338
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I++ + LD E + L +RA+D G PP
Sbjct: 2339 STGI--------------------ILISRSLDYE-QSRQHTLLVRAIDSGMPP 2370
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ +G++V+ + A D D G N++I YS+ G N G
Sbjct: 1559 HAPWFTSSSYKGRVFESAAVGSMVLQVTALDKD-KGENAEIVYSIESG---------NTG 1608
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F I P +I K LD+ + Y L +RA DKG+PP
Sbjct: 1609 --NAFNIHPIL---------GSITTAKELDQS-SQEEYTLMVRATDKGSPP 1647
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ G ++ + AA D N++I+YS+ G+ G F+ID+
Sbjct: 3225 NPPVFEYREYSATVSEDAVAGIEILQVYAASRDIEA-NAEITYSIISGNEHGKFSIDS-- 3281
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I ++ LD E +P Y LT+ A D GTP
Sbjct: 3282 ------------------KTGAIFIIGGLDYESSP-EYYLTVEATDGGTP 3312
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ ++E+ P GT++ L+A D D G +S++ YS+ G G G F +D
Sbjct: 924 NPPKFIPLNYRVKIREDLPEGTIITWLEAYDPD-VGQSSQVRYSLLDG-GEGSFDVD--- 978
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I +++ LD E + YNLT+RA DKG P
Sbjct: 979 -----------------KLSGAIRIVQGLDFERKQM-YNLTVRAKDKGKP 1010
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N PVF+ +Y+A + E P G V +KA+DAD + K+ YS+ G+ F I+++
Sbjct: 2387 NPPVFNQLLYEANISELAPRGHFVTCVKASDADTSDV-GKLEYSILTGNDHMNFVINSK 2444
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y ++EN+P+G + L+ D D +++ G+ F I+ +G
Sbjct: 3435 NPPVFSKGNYSIIIQENKPVGFNIQQLEVTDKDSSHNGPPFFFTIVSGNEDYAFEINQQG 3494
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR---EIAPLGYNLTLRAVDKGTPP 112
L T I K K++ + LK+ D +++ L Y + +R +++ P
Sbjct: 3495 ELT------TAIHLKRKVKDHYFLHLKVADNGRPQLSSLAY-VDIRVIEESIHP 3541
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 21/114 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP + VY V EN P VI ++A DAD N K++Y + G+ G+F+++ +
Sbjct: 1136 NAPQTTQPVYYPEVMENSPKDVSVIQIEAFDADSTA-NDKLTYKITSGNPQGFFSMNPK- 1193
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
T + T +K LDRE + L + D G PP+ T
Sbjct: 1194 ---------TGLITTTSRK---------LDRE-QQSEHILEVTVTDNGIPPKST 1228
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 51/127 (40%), Gaps = 25/127 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTID 58
N PV Y+A + EN P GT VI +KA D D G N +++Y + + D F I+
Sbjct: 2806 NKPVIESNPYKAFIVENMPAGTRVIQIKATDQD-SGSNGQVTYRLYPAQDADISESFAIN 2864
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
E I LK LD E Y +T+ A D+G + T A
Sbjct: 2865 AETGW--------------------ITTLKELDHE-KQNKYKITVVASDRGEKVQLTSTA 2903
Query: 119 TPRNGLT 125
+T
Sbjct: 2904 VVEVSVT 2910
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 20/114 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F Y+ + + P GT VI + A+DAD G N+ I+Y++ ++
Sbjct: 2593 NAPLFRATEYEVNISSDVPRGTSVIKVLASDAD-EGTNADITYTMEADSP----SVQENL 2647
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+NH V T TK+ L+ E L + +RA D G+P +E+
Sbjct: 2648 EINHLTGVIT-----TKE--------SLIGLENEFLAF--FVRATDGGSPQKES 2686
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV +Y T+ E+ P G L++ + A DAD N++I+Y+++G
Sbjct: 3020 NSPVCEKMLYTETIPEDAPPGKLIMQILATDADIRS-NAEITYTLQGAGA---------- 3068
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
F + P D G K L LDRE + Y ++A D G
Sbjct: 3069 --EDFSLSP---DTGELK------TLAALDREQKSV-YTFMVKASDGG 3104
>gi|355749557|gb|EHH53956.1| hypothetical protein EGM_14676 [Macaca fascicularis]
Length = 4981
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y ++ EN P+G+ V+ DAD G+NS+++YS+ GD LG FT+D G
Sbjct: 1940 NPPIFSLNSYSTSLMENLPVGSTVLVFNVTDADD-GINSELAYSIASGDSLGQFTVDKNG 1998
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L VLK LDRE YNL ++ D P + +T +
Sbjct: 1999 LLK---------------------VLKALDRESQSF-YNLVVQVHDLPQIPASRFTSTAQ 2036
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS VY+ + E P G+ V + A D D G+N+ + YS+ G+GLG+F I
Sbjct: 473 PVFSQQVYRVNLSEEAPPGSYVSGISATDGD-SGLNANLRYSIVSGNGLGWFHIS----- 526
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T G LDRE+A L + A D+G P+ +Y
Sbjct: 527 EHSGLVTTGAAGG-------------LDRELAS-QIVLNISARDQGVHPKVSY 565
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ +Y + E PIGT V + A D+D S+ SY + G+ G F+
Sbjct: 3402 PVFTLNIYSVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGAFS------- 3454
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I V LDRE P+ YNL++ AVD GTP
Sbjct: 3455 ---------INPQTGQ----ITVTAELDRETLPI-YNLSVLAVDSGTP 3488
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y+ + EN GT +I + AAD D G N ++ Y + G+ F ID+
Sbjct: 2150 NNPIFAQALYKVEINENTLTGTDIIQVFAADGD-EGTNGQVRYGIVNGNTNQEFRIDSVT 2208
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I V K LDRE P Y+LT++A D+G+ PR
Sbjct: 2209 GA--------------------ITVAKPLDREKTPT-YHLTVQAADRGSTPR 2239
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N I Y ++ +EG
Sbjct: 246 NPPVFGSSHYQAGVPEDAVVGSSVLQVAAADAD-EGTNXXIRYRLQ-----------DEG 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P ++DP T I V + LD E A Y+LT++A+D+G P
Sbjct: 294 -------TPFQMDPETGL----ITVREPLDFE-ARRQYSLTVQAMDRGVP 331
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 47/107 (43%), Gaps = 18/107 (16%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD N IS + GG NE HF + +K
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSSAANGNISVQILGG---------NEQ--RHFEVQSSK 413
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK-GTPPRETYKA 118
+ P I V LDRE P YNLT+ D G PP +A
Sbjct: 414 V-PNLSL----IKVASALDRERIP-SYNLTVSVSDNYGAPPGAAVQA 454
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF Y TV EN P GT VI L A DAD G N+ I+Y+V+ D F ID
Sbjct: 3190 NSPVFLSDDYFPTVLENAPSGTTVIHLNATDAD-SGTNAVIAYTVQSSDS-DLFVID 3244
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF Y+ T+ E++P+ + ++A+D D G N +I+Y++ G+ F I +G
Sbjct: 992 NSPVFDQLSYEVTLSESEPVNSRFFKVQASDKD-SGANGEIAYTIAEGNTGDAFGIFPDG 1050
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D + + +VV DR + PL + + +
Sbjct: 1051 QL----YIKSELDRELQDRYVLMVVAS--DRAVEPLSATVNVTVI 1089
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 50/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQAT+ E+ T V+ + A+D D G N I YS+ G+ F ID
Sbjct: 1206 NAPKFLKDFYQATISESAANLTQVLRVSASDVD-EGNNGLIHYSIIKGNEERQFAID--- 1261
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I G + ++ LD E P Y+L ++AVD GT P
Sbjct: 1262 -----------ITSG------QVALIGKLDYEATP-AYSLVIQAVDSGTIP 1294
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G N+ + YS+ G + G F+
Sbjct: 1311 NTPSFPKSTLFVDVLENMRIGELVSSVTATDSD-SGDNADLYYSITGTNNHGTFS----- 1364
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1365 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1402
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G VI A D+D G++ + SY + G+ G F +D
Sbjct: 131 NAPVFPDPSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIIRGNEAGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P R Y
Sbjct: 189 -----------ITLNPSGEGAFLHLVSKGGLDREVTP-QYQLLVEVEDKGEPKRRGY 233
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 22/121 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS AT+ E+ +G++V T+ A D D MN I YS+ G+ G F I++
Sbjct: 3085 HTPEFSQNHMSATIPESHSVGSIVRTVSARDRD-AAMNGLIKYSISSGNEEGIFAINSST 3143
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ + + K LD E+ + +T+ A+D G R Y +
Sbjct: 3144 GI--------------------LTLAKALDYELCQ-KHEMTISAIDGGWVARTGYCSVTV 3182
Query: 122 N 122
N
Sbjct: 3183 N 3183
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A +KEN+P G+ + T+ A D D G N + YS+ GD
Sbjct: 685 NSPVFYPVQYFAHIKENEPGGSYITTVSATDPD-LGTNGTVKYSISAGD 732
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP F Y V +N +GT +I + A D G+NS++ Y + + LG F +DN+
Sbjct: 2979 NAPQFLKSKYFTPVTKNVKVGTKLIKVIAIDDKDFGLNSEVEYFISNDNHLGKFKLDND 3037
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVF Y V EN +G V ++ A+ D +NS ISY + GD G F I+
Sbjct: 789 NPPVFGQVAYSFVVFENVALGYHVGSVSASTMD---LNSNISYLITTGDQKGMFAIN 842
Score = 35.0 bits (79), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 23/99 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL-NHFRIVPTK 72
++ EN PIGT VI++ A D D +N ++SY TI + P NHF I K
Sbjct: 1428 SIVENIPIGTSVISVTAHDPD-ADINGQLSY-----------TIIQQMPRGNHFTIDEVK 1475
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
GT I +DRE A L + LT++A D+ P
Sbjct: 1476 ---GT------IYTNAEIDREFANL-FELTVKANDQAVP 1504
>gi|194208467|ref|XP_001502920.2| PREDICTED: protocadherin Fat 4 isoform 1 [Equus caballus]
Length = 4981
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y ++ EN P+G+ V+ DAD G+NS+++YS+ GD LG FT+D G
Sbjct: 1940 NPPIFSLNSYSTSLMENLPLGSTVLVFNVTDADD-GINSQLAYSIASGDSLGQFTVDKNG 1998
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L VLK LDRE YNL ++ D P + +T +
Sbjct: 1999 VLK---------------------VLKALDRESQSF-YNLVVQVHDLPQLPASRFTSTAQ 2036
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 51/108 (47%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS +Y + E P GT V + A D+D S+ SY + G+ G F+
Sbjct: 3402 PVFSLNIYSVQISEGVPTGTHVTFVSAFDSDSVPSWSRFSYFIGSGNENGAFS------- 3454
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I V LDRE P+ YNLT+ AVD GTP
Sbjct: 3455 ---------INPQTGQ----ITVTAELDRETLPI-YNLTVLAVDSGTP 3488
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ VY+ + E P G+ V + A D D G+N+ + YS+ G+GLG+F I
Sbjct: 473 PVFAQQVYRVNLSEEAPPGSYVSGVSATDGDS-GLNANLRYSIVSGNGLGWFHIS----- 526
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T G LDRE+A L + A D+G P+ +Y
Sbjct: 527 EHSGLVTTGAAGG-------------LDRELAS-QIVLNISARDQGVHPKVSY 565
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y+ + EN GT +I + A D D G N ++ Y + GD F ID+
Sbjct: 2150 NNPIFAQALYKVEINENTLTGTDIIQVCATDGD-EGTNGQVRYGIVDGDANQEFRIDSVT 2208
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I V K LDRE P Y LT++A D+G+ PR
Sbjct: 2209 GA--------------------ITVAKPLDREKTPT-YFLTVQATDRGSTPR 2239
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD P N IS + GG NE HF + +K
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSPAANGNISVQILGG---------NEQ--RHFEVQSSK 413
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK-GTPPRETYKA 118
+ P I V LDRE P YNLT+ D G PP +A
Sbjct: 414 V-PNLSL----IKVASALDRERIP-SYNLTVSVSDNYGAPPAAAVQA 454
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N+ I Y ++ +EG
Sbjct: 246 NPPVFGSSHYQAGVPEDAAVGSSVLQVAAADAD-EGTNADIRYRLQ-----------DEG 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P ++DP T I V + LD E A Y+LT++A+D+G P
Sbjct: 294 -------TPFQMDPETGL----ITVREPLDFE-ARRQYSLTVQAMDRGVP 331
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G N+ + YS+ G + G F+
Sbjct: 1311 NTPSFPKSTLFVDVLENMRIGELVSSVTATDSD-SGDNADLHYSITGTNNHGTFS----- 1364
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1365 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1402
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G VI A D+D G++ + SY + G+ G F +D
Sbjct: 131 NAPVFPDPSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIIQGNEAGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P R Y
Sbjct: 189 -----------ITLNPSGEGAFLHLVSKGGLDREVTP-QYQLLVEVEDKGEPKRRGY 233
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 48/113 (42%), Gaps = 25/113 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F + Y V +N +GT +I + A D G+NS++ Y + + LG F +DN
Sbjct: 2979 NAPQFLEMKYFTPVTKNVKVGTKLIKVTAVDDKDFGLNSEVEYFISSENHLGKFKLDN-- 3036
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYN--LTLRAVDKGTPP 112
N + + I+ L N +T+ A DKG PP
Sbjct: 3037 ---------------------NTGWISVASSLISDLNQNFLITVTAKDKGNPP 3068
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A ++EN+P G+ + T+ A D D G+N + YS+ GD
Sbjct: 685 NSPVFYPVQYFAHIQENEPGGSYITTVSATDPD-LGLNGTVRYSISAGD 732
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y+ T+ E++P+ + ++A D D G N +I+YS+ G+ F I +G
Sbjct: 992 NPPVFDQLSYEVTLSESEPVNSRFFKVQAFDKD-SGANGEIAYSIAEGNTGDAFGIFPDG 1050
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPL 97
L + +++D + + +V+ DR + PL
Sbjct: 1051 QL----YIKSELDRELQDRYVLLVIAS--DRAVEPL 1080
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS AT+ E+ IG V T+ A D D MN I YS+ G+ G F I++
Sbjct: 3085 HTPEFSQSHMSATIPESHSIGATVRTVSARDRD-AAMNGLIRYSISSGNEEGIFAINSST 3143
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ + + K LD E+ + +T+ A D G R Y
Sbjct: 3144 GV--------------------LTLAKALDYELCQ-KHEMTISATDGGWVARTGY 3177
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQAT+ E+ T V+ + A+D D G N I Y V G+ F ID+
Sbjct: 1206 NAPKFLKDFYQATISESAANLTQVLRVSASDVD-EGNNGLIHYYVIKGNEERQFAIDSTS 1264
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ ++ LD E P Y+L ++AVD G
Sbjct: 1265 G--------------------QVTLIGKLDYEATP-AYSLVIQAVDSG 1291
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
+PVF Y TV EN P GT VI L A D D G N+ I+Y+++ D F ID
Sbjct: 3191 SPVFLPDEYFPTVLENAPSGTTVIHLNATD-DDSGTNAVIAYTIQSSDS-DLFVID 3244
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVFS Y V EN +G V ++ A+ D +NS ISY + GD G F I+
Sbjct: 789 NPPVFSQAAYSFVVFENVALGYHVGSVSASTMD---LNSNISYLITTGDQKGMFAIN 842
Score = 35.4 bits (80), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 38/87 (43%), Gaps = 15/87 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTL--VITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
P+F Y V EN +GTL I A D G NSK+SY + GG+ FT+ G
Sbjct: 2257 PIFELSPYSVNVPEN--LGTLPRTILQVVARDDDQGSNSKLSYVLFGGNEDNAFTLSASG 2314
Query: 62 PL-----------NHFRIVPTKIDPGT 77
L HF +V T D G+
Sbjct: 2315 ELRVTQSLDRETKEHFVLVITATDAGS 2341
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF + TV+EN G+ ++ L A DAD G N+ ++Y++ G F ID E
Sbjct: 1736 NPPVFPTDMLDLTVEENIGDGSKIMQLTAMDAD-EGANALVTYTIISG-ADDSFRIDPES 1793
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
++ TK ++ +Y+++V + + + N+T+ V+ TP
Sbjct: 1794 G----DLIATKRLDRERRSKYSLLVRADDGLQSSDMRINITVSDVNDHTP 1839
>gi|403301749|ref|XP_003941545.1| PREDICTED: protocadherin Fat 3 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 4591
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 55/112 (49%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F+ID+E
Sbjct: 1038 LHTPYFADFAVVGSVKENSRIGTSVLQVTARDED-SGRDGEIQYSIRDGSGLGRFSIDDE 1096
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I +LDRE Y LT+ A D+G P
Sbjct: 1097 TGV--------------------ITAADILDRETTG-SYWLTVYATDRGVVP 1127
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 2920 NAPVFVQEVYRGNVKESDPPGEVVAVLSTWDRDTSDVNRQVSYHITGGNPRGRFAL---- 2975
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 2976 --------------GLVQSEWKVYVKRPLDREEQDI-YFLNITATD 3006
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS VY A + E+ +G VI L A D D P N +I +S+ GD FT+D
Sbjct: 3337 NPPKFSQDVYSAVISEDALVGDSVILLIAEDVDSPP-NGQIHFSIVNGDRDNEFTVDPVL 3395
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L + V K LDRE GY+L ++AVD G P
Sbjct: 3396 GL--------------------VKVKKKLDRERVS-GYSLLVQAVDSGIP 3424
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI ++A D D PG +ISY++ F ID+ G
Sbjct: 2493 SPAFSQSTYVAEVRENAAAGTKVIHVRATDGD-PGTYGQISYAIINDFAKDRFLIDSNGQ 2551
Query: 63 L 63
+
Sbjct: 2552 V 2552
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F +Y V E+ P+GT V+T+ A+D D G N I+YS+ + L +
Sbjct: 468 HTPEFQQPLYDTFVNESVPVGTSVLTVSASDKD-KGENGYITYSIASLNLLPF------- 519
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 520 AINQFTGV--------------ISTTEELDFESSPEIYRFIVRASDWGSPYRH 558
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D S+S+ G+ F +D G
Sbjct: 3442 NSPVFTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPPFSFSILSGNEEKEFVLDPHG 3501
Query: 62 PL 63
L
Sbjct: 3502 IL 3503
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 16/78 (20%)
Query: 37 GMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIA 95
G N +I S S+ GD L F + EG EY I K +D E
Sbjct: 293 GANGEIESVSIVAGDPLDQFFLAKEGKW---------------LNEYKIKERKQVDWESF 337
Query: 96 PLGYNLTLRAVDKGTPPR 113
P GYNLTL+A DKG+P +
Sbjct: 338 PYGYNLTLQAKDKGSPQK 355
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 17/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ S+ +Y V EN P VI ++A D D N K++Y + G+ +F I
Sbjct: 1144 NAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSS-NEKLTYRITSGNPQNFFAINIKT 1202
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNI-VVLKLLDR 92
D E HF V T D G K+ I VV+++LD
Sbjct: 1203 GLITTTSRKLDREQQAEHFLEV-TVTDGGPSPKQSTIWVVVQVLDE 1247
Score = 38.9 bits (89), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D++
Sbjct: 2390 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDYD-RLEYSILSGNDRTSFLMDSKS 2448
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 24/110 (21%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFR 67
F VKE+ P+G ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 729 FPSDVAVKEDLPVGADILKIKAYDAD-SGFNGKVLFTISDGNTDSCFNIDMETGQLK--- 784
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 785 ------------------VLMPMDREHTDL-YLLNITIYDLGNPQKSSWR 815
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 25/120 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVF Y A V+ + GTL+ + A D D G N +++Y ++ D G+F I+ N
Sbjct: 2080 NSPVFLGLPYYAAVQVDAEPGTLIYQVTAIDKD-KGANGEVTYVLQ--DDYGHFEINPNS 2136
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
G N+ + + + +++ + Y +T+ A D G PP T P
Sbjct: 2137 G---------------------NVFLKEAFNADLSNIEYGVTILAKDGGKPPLSTSVELP 2175
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 44/108 (40%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y A + E+ P L++ + A DAD G N I Y++ G +F G
Sbjct: 3025 NSPVCDQVAYTALLPEDIPSNKLILKVSAKDAD-IGSNGDIRYTLYGSGNSEFFLDPERG 3083
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
L L LLDRE P+ Y+L +A D G
Sbjct: 3084 ELK---------------------TLALLDRERVPV-YSLIAKATDGG 3109
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 48/110 (43%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ G+ V+ + A D G N++I+Y +R G+ G F
Sbjct: 3232 NPPVFERRDYLVTVPEDTSPGSQVLAVFATSKDI-GTNAEITYLIRSGNEQGKF------ 3284
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
KI P T I V +LD E+ Y L + A D GTP
Sbjct: 3285 ----------KIHPKTG----GISVSDVLDYELCKRFY-LVVEAKDGGTP 3319
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---------RGGDGL 52
N+PVF Y + E+ IGT +I ++A D D G N +++YSV G+
Sbjct: 827 NSPVFIQDSYSVNILESSSIGTEIIQVEARDKD-LGSNGEVTYSVLTDTQQFAINSSTGI 885
Query: 53 GYFT--IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLL 90
Y +D E N+ + + + ++ +++V LK+
Sbjct: 886 VYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVF 925
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG----LGYFTI 57
N PVF Y + E PIGT + ++A D D G N +++YS+ + F I
Sbjct: 2810 NKPVFETSSYDTIIMEGMPIGTKLTQVRAIDMD-WGANGQVTYSLHSDSEPEKVMEAFNI 2868
Query: 58 D-NEGPLNHFRIVPTKIDP 75
D N G ++ + + + DP
Sbjct: 2869 DSNTGWISTLKDLDHETDP 2887
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 46/109 (42%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F ID
Sbjct: 933 SPAFIPSSYSVKVLEDLPVGTVIAWLETHDPD-LGLGGQVRYSLV-NDYNGRFEID---- 986
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+R DKG P
Sbjct: 987 ----------------KASGTIRLSKELDYEKQQF-YNLTVRVKDKGRP 1018
>gi|403301747|ref|XP_003941544.1| PREDICTED: protocadherin Fat 3 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 4559
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 55/112 (49%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F+ID+E
Sbjct: 1038 LHTPYFADFAVVGSVKENSRIGTSVLQVTARDED-SGRDGEIQYSIRDGSGLGRFSIDDE 1096
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I +LDRE Y LT+ A D+G P
Sbjct: 1097 TGV--------------------ITAADILDRETTG-SYWLTVYATDRGVVP 1127
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 2920 NAPVFVQEVYRGNVKESDPPGEVVAVLSTWDRDTSDVNRQVSYHITGGNPRGRFAL---- 2975
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 2976 --------------GLVQSEWKVYVKRPLDREEQDI-YFLNITATD 3006
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS VY A + E+ +G VI L A D D P N +I +S+ GD FT+D
Sbjct: 3337 NPPKFSQDVYSAVISEDALVGDSVILLIAEDVDSPP-NGQIHFSIVNGDRDNEFTVDPVL 3395
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L + V K LDRE GY+L ++AVD G P
Sbjct: 3396 GL--------------------VKVKKKLDRERVS-GYSLLVQAVDSGIP 3424
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI ++A D D PG +ISY++ F ID+ G
Sbjct: 2493 SPAFSQSTYVAEVRENAAAGTKVIHVRATDGD-PGTYGQISYAIINDFAKDRFLIDSNGQ 2551
Query: 63 L 63
+
Sbjct: 2552 V 2552
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F +Y V E+ P+GT V+T+ A+D D G N I+YS+ + L +
Sbjct: 468 HTPEFQQPLYDTFVNESVPVGTSVLTVSASDKD-KGENGYITYSIASLNLLPF------- 519
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 520 AINQFTGV--------------ISTTEELDFESSPEIYRFIVRASDWGSPYRH 558
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D S+S+ G+ F +D G
Sbjct: 3442 NSPVFTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPPFSFSILSGNEEKEFVLDPHG 3501
Query: 62 PL 63
L
Sbjct: 3502 IL 3503
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 16/78 (20%)
Query: 37 GMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIA 95
G N +I S S+ GD L F + EG EY I K +D E
Sbjct: 293 GANGEIESVSIVAGDPLDQFFLAKEGKW---------------LNEYKIKERKQVDWESF 337
Query: 96 PLGYNLTLRAVDKGTPPR 113
P GYNLTL+A DKG+P +
Sbjct: 338 PYGYNLTLQAKDKGSPQK 355
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 17/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ S+ +Y V EN P VI ++A D D N K++Y + G+ +F I
Sbjct: 1144 NAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSS-NEKLTYRITSGNPQNFFAINIKT 1202
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNI-VVLKLLDR 92
D E HF V T D G K+ I VV+++LD
Sbjct: 1203 GLITTTSRKLDREQQAEHFLEV-TVTDGGPSPKQSTIWVVVQVLDE 1247
Score = 38.9 bits (89), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D++
Sbjct: 2390 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDYD-RLEYSILSGNDRTSFLMDSKS 2448
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 24/110 (21%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFR 67
F VKE+ P+G ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 729 FPSDVAVKEDLPVGADILKIKAYDAD-SGFNGKVLFTISDGNTDSCFNIDMETGQLK--- 784
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 785 ------------------VLMPMDREHTDL-YLLNITIYDLGNPQKSSWR 815
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 25/120 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVF Y A V+ + GTL+ + A D D G N +++Y ++ D G+F I+ N
Sbjct: 2080 NSPVFLGLPYYAAVQVDAEPGTLIYQVTAIDKD-KGANGEVTYVLQ--DDYGHFEINPNS 2136
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
G N+ + + + +++ + Y +T+ A D G PP T P
Sbjct: 2137 G---------------------NVFLKEAFNADLSNIEYGVTILAKDGGKPPLSTSVELP 2175
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 44/108 (40%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y A + E+ P L++ + A DAD G N I Y++ G +F G
Sbjct: 3025 NSPVCDQVAYTALLPEDIPSNKLILKVSAKDAD-IGSNGDIRYTLYGSGNSEFFLDPERG 3083
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
L L LLDRE P+ Y+L +A D G
Sbjct: 3084 ELK---------------------TLALLDRERVPV-YSLIAKATDGG 3109
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 48/110 (43%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ G+ V+ + A D G N++I+Y +R G+ G F
Sbjct: 3232 NPPVFERRDYLVTVPEDTSPGSQVLAVFATSKDI-GTNAEITYLIRSGNEQGKF------ 3284
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
KI P T I V +LD E+ Y L + A D GTP
Sbjct: 3285 ----------KIHPKTG----GISVSDVLDYELCKRFY-LVVEAKDGGTP 3319
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---------RGGDGL 52
N+PVF Y + E+ IGT +I ++A D D G N +++YSV G+
Sbjct: 827 NSPVFIQDSYSVNILESSSIGTEIIQVEARDKD-LGSNGEVTYSVLTDTQQFAINSSTGI 885
Query: 53 GYFT--IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLL 90
Y +D E N+ + + + ++ +++V LK+
Sbjct: 886 VYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVF 925
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG----LGYFTI 57
N PVF Y + E PIGT + ++A D D G N +++YS+ + F I
Sbjct: 2810 NKPVFETSSYDTIIMEGMPIGTKLTQVRAIDMD-WGANGQVTYSLHSDSEPEKVMEAFNI 2868
Query: 58 D-NEGPLNHFRIVPTKIDP 75
D N G ++ + + + DP
Sbjct: 2869 DSNTGWISTLKDLDHETDP 2887
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 46/109 (42%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F ID
Sbjct: 933 SPAFIPSSYSVKVLEDLPVGTVIAWLETHDPD-LGLGGQVRYSLV-NDYNGRFEID---- 986
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+R DKG P
Sbjct: 987 ----------------KASGTIRLSKELDYEKQQF-YNLTVRVKDKGRP 1018
>gi|301770611|ref|XP_002920723.1| PREDICTED: protocadherin Fat 1-like [Ailuropoda melanoleuca]
Length = 4587
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 58/112 (51%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVFS Y A V E+ + VIT+ A DAD P NS I YS+ G+ FT+D
Sbjct: 3330 NSPVFSQDTYTAVVSEDALLEQSVITVMADDADGPS-NSHIRYSIIDGNQGSPFTVD--- 3385
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
PT+ + + V KLLDRE GY LT++A D G+PPR
Sbjct: 3386 --------PTRGE---------VKVTKLLDRETIS-GYTLTVQASDNGSPPR 3419
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVFS FV + VKE+ P+G ++T+ A D D G + ++ YS+R G G+G F ID E
Sbjct: 1028 LHPPVFSSFVEKGVVKEDVPVGFSIMTVSAHDED-TGRDGEVRYSIRDGSGVGVFRIDEE 1086
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ + + LDRE P Y LT+ A D+G P ++
Sbjct: 1087 TGV--------------------VETAERLDRESTP-HYWLTVYATDRGVVPLSSF 1121
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N +++Y + GGD LG F I+N
Sbjct: 2915 PRFTAEIYKGTVSEDDPPGGVIAILSTTDADSEEINRQVTYYITGGDPLGQFAIEN---- 2970
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE Y LT+ A D
Sbjct: 2971 --------------IQNEWKVYVKKPLDREKRD-NYLLTITATD 2999
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 58/118 (49%), Gaps = 23/118 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS Y TV EN GTL+ ++A D D G+N KISYS+ ++D +
Sbjct: 3120 NAPEFSADPYTITVFENTEPGTLLTRVQATDRD-SGLNRKISYSLVN-------SVDGQF 3171
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+N + I + K LDRE + Y+LTL+AVD+G P R T T
Sbjct: 3172 SINELSGI--------------IQLEKPLDREQQAV-YSLTLKAVDQGLPRRLTATGT 3214
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 52/113 (46%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A+ EN PIGT V+++ A D D G N ++YS+ + + +
Sbjct: 458 NPPEFTQSAYKASFDENVPIGTTVMSVSAVDPD-EGENGYVTYSIANLNHVPFV------ 510
Query: 62 PLNHFR-IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+NHF V T D LD E+ P Y L +RA D G P R
Sbjct: 511 -INHFTGAVSTSED---------------LDYELMPRVYTLRIRASDWGLPYR 547
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ +G++V+ + A D D G N+++ YS+ G+ FTID
Sbjct: 1557 HAPWFTSSSYEGRVYESAAVGSVVLQVTALDKD-KGKNAEVLYSIESGNIGNSFTID--- 1612
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+ +I K LDRE + + Y+L ++A D+G PP
Sbjct: 1613 PILG-----------------SIKTAKELDRE-SQVEYDLMVKATDQGNPP 1645
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 17/89 (19%)
Query: 25 VITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNI 84
++T+ D P G + S S+ GD L FR V + PG+K EY +
Sbjct: 274 IVTVDDCDQGPNGEIA--SLSIVAGD-----------LLQQFRTV--RSSPGSK--EYKV 316
Query: 85 VVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ +D + P GYNLTL+A DKGTPP+
Sbjct: 317 KAVGAIDWDSHPFGYNLTLQAKDKGTPPQ 345
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ IGT V+ + A D N++I+YS+ G+ G F+ID+
Sbjct: 3225 NPPVFEYRDYGATVSEDVLIGTEVLQVYAVSRDIEA-NAEITYSIMSGNEHGKFSIDS-- 3281
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ I V++ LD E + Y LT+ A+D GTP
Sbjct: 3282 ------------------RTGAIFVIENLDYE-SSREYYLTIEAMDGGTP 3312
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKEN P+G+ +I + A D D G N K+ Y++ GG+ F ID E +
Sbjct: 725 VKENHPVGSSIIFMNATDLD-TGFNGKLVYAISGGNEDSCFIIDMETGM----------- 772
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ +L LDRE Y L + D G P + ++
Sbjct: 773 ---------LKILSPLDRETTD-KYTLNVTVSDLGIPQKAAWR 805
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 23/101 (22%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
Y+ V+E+ P GT+++ L+A D D G +S++ YS+ G G+F +D
Sbjct: 931 YRVKVREDLPEGTIIMWLEAYDPD-LGQSSQVRYSLL-DHGEGHFDVD------------ 976
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT+RA DKG P
Sbjct: 977 --------KLSGAVRIVQHLDFEKKQV-YNLTVRAKDKGKP 1008
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y+ + N P GT VI + A+DAD G N+ ++Y++ D+E
Sbjct: 2591 NAPQFRATRYEVDIGSNAPKGTSVIKVLASDAD-EGSNADVTYAIEA---------DSES 2640
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I K+ KE L L+ E + +RAVD G+P RE+
Sbjct: 2641 VKENLEI--NKLSGIITTKE----SLIGLENEF----FTFFVRAVDSGSPSRES 2684
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y ++EN+P+G V+ L +D D +SV G+ F ++ +G
Sbjct: 3435 NAPVFSKGNYSVIIQENKPVGFSVLQLVVSDKDSSHNGPPFFFSVVSGNDDRAFEVNQQG 3494
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG 98
L + K+ K++ ++ +K+ D PL
Sbjct: 3495 VLLTSAAIKRKV------KDHYLLHVKVADNGKPPLS 3525
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P+F +Y+A + E+ G V +KA DAD ++ K+ YS+ G+ F ID
Sbjct: 2385 NPPLFDQHIYEARISEHAIHGHFVTCVKAYDADSSDVD-KLDYSILSGNDHKNFVID 2440
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
+++PVF Y+ + EN P+ TLVI +KAAD D G+ I+Y +
Sbjct: 2486 LHSPVFPQSEYEVELAENAPLHTLVIEVKAADGD-SGIYGHITYHI 2530
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N+PV Y+A + EN P G+ VI ++A+D D G N +++YS+
Sbjct: 2804 NSPVLESNPYEAFIVENLPAGSRVIQVRASDLD-SGTNGQVTYSL 2847
>gi|281339742|gb|EFB15326.1| hypothetical protein PANDA_009494 [Ailuropoda melanoleuca]
Length = 4593
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 58/112 (51%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVFS Y A V E+ + VIT+ A DAD P NS I YS+ G+ FT+D
Sbjct: 3336 NSPVFSQDTYTAVVSEDALLEQSVITVMADDADGPS-NSHIRYSIIDGNQGSPFTVD--- 3391
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
PT+ + + V KLLDRE GY LT++A D G+PPR
Sbjct: 3392 --------PTRGE---------VKVTKLLDRETIS-GYTLTVQASDNGSPPR 3425
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVFS FV + VKE+ P+G ++T+ A D D G + ++ YS+R G G+G F ID E
Sbjct: 1028 LHPPVFSSFVEKGVVKEDVPVGFSIMTVSAHDED-TGRDGEVRYSIRDGSGVGVFRIDEE 1086
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ + + LDRE P Y LT+ A D+G P ++
Sbjct: 1087 TGV--------------------VETAERLDRESTP-HYWLTVYATDRGVVPLSSF 1121
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N +++Y + GGD LG F I+N
Sbjct: 2921 PRFTAEIYKGTVSEDDPPGGVIAILSTTDADSEEINRQVTYYITGGDPLGQFAIEN---- 2976
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE Y LT+ A D
Sbjct: 2977 --------------IQNEWKVYVKKPLDREKRD-NYLLTITATD 3005
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 58/118 (49%), Gaps = 23/118 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS Y TV EN GTL+ ++A D D G+N KISYS+ ++D +
Sbjct: 3126 NAPEFSADPYTITVFENTEPGTLLTRVQATDRD-SGLNRKISYSLVN-------SVDGQF 3177
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+N + I + K LDRE + Y+LTL+AVD+G P R T T
Sbjct: 3178 SINELSGI--------------IQLEKPLDREQQAV-YSLTLKAVDQGLPRRLTATGT 3220
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 52/113 (46%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A+ EN PIGT V+++ A D D G N ++YS+ + + +
Sbjct: 458 NPPEFTQSAYKASFDENVPIGTTVMSVSAVDPD-EGENGYVTYSIANLNHVPFV------ 510
Query: 62 PLNHFR-IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+NHF V T D LD E+ P Y L +RA D G P R
Sbjct: 511 -INHFTGAVSTSED---------------LDYELMPRVYTLRIRASDWGLPYR 547
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
Query: 25 VITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNI 84
++T+ D P G S S+ GD L FR V + PG+K EY +
Sbjct: 274 IVTVDDCDQGPNG--EIASLSIVAGD-----------LLQQFRTV--RSSPGSK--EYKV 316
Query: 85 VVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ +D + P GYNLTL+A DKGTPP+
Sbjct: 317 KAVGAIDWDSHPFGYNLTLQAKDKGTPPQ 345
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 16/111 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ +G++V+ + A D D G N+++ YS+ G + + N G
Sbjct: 1557 HAPWFTSSSYEGRVYESAAVGSVVLQVTALDKD-KGKNAEVLYSIESG---IFGALRNIG 1612
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F I P T K+ LDRE + + Y+L ++A D+G PP
Sbjct: 1613 --NSFTIDPILGSIKTAKE---------LDRE-SQVEYDLMVKATDQGNPP 1651
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ IGT V+ + A D N++I+YS+ G+ G F+ID+
Sbjct: 3231 NPPVFEYRDYGATVSEDVLIGTEVLQVYAVSRDIEA-NAEITYSIMSGNEHGKFSIDS-- 3287
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ I V++ LD E + Y LT+ A+D GTP
Sbjct: 3288 ------------------RTGAIFVIENLDYE-SSREYYLTIEAMDGGTP 3318
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKEN P+G+ +I + A D D G N K+ Y++ GG+ F ID E +
Sbjct: 725 VKENHPVGSSIIFMNATDLD-TGFNGKLVYAISGGNEDSCFIIDMETGM----------- 772
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ +L LDRE Y L + D G P + ++
Sbjct: 773 ---------LKILSPLDRETTD-KYTLNVTVSDLGIPQKAAWR 805
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 23/101 (22%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
Y+ V+E+ P GT+++ L+A D D G +S++ YS+ G G+F +D
Sbjct: 931 YRVKVREDLPEGTIIMWLEAYDPD-LGQSSQVRYSLL-DHGEGHFDVD------------ 976
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT+RA DKG P
Sbjct: 977 --------KLSGAVRIVQHLDFEKKQV-YNLTVRAKDKGKP 1008
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y+ + N P GT VI + A+DAD G N+ ++Y++ D+E
Sbjct: 2597 NAPQFRATRYEVDIGSNAPKGTSVIKVLASDAD-EGSNADVTYAIEA---------DSES 2646
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I K+ KE L L+ E + +RAVD G+P RE+
Sbjct: 2647 VKENLEI--NKLSGIITTKE----SLIGLENEF----FTFFVRAVDSGSPSRES 2690
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y ++EN+P+G V+ L +D D +SV G+ F ++ +G
Sbjct: 3441 NAPVFSKGNYSVIIQENKPVGFSVLQLVVSDKDSSHNGPPFFFSVVSGNDDRAFEVNQQG 3500
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG 98
L + K+ K++ ++ +K+ D PL
Sbjct: 3501 VLLTSAAIKRKV------KDHYLLHVKVADNGKPPLS 3531
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P+F +Y+A + E+ G V +KA DAD ++ K+ YS+ G+ F ID
Sbjct: 2391 NPPLFDQHIYEARISEHAIHGHFVTCVKAYDADSSDVD-KLDYSILSGNDHKNFVID 2446
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
+++PVF Y+ + EN P+ TLVI +KAAD D G+ I+Y +
Sbjct: 2492 LHSPVFPQSEYEVELAENAPLHTLVIEVKAADGD-SGIYGHITYHI 2536
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N+PV Y+A + EN P G+ VI ++A+D D G N +++YS+
Sbjct: 2810 NSPVLESNPYEAFIVENLPAGSRVIQVRASDLD-SGTNGQVTYSL 2853
>gi|393908503|gb|EJD75084.1| cadherin domain-containing protein [Loa loa]
Length = 4394
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+F D Y+ +V EN P+ T V+TL A D D PGM + Y+V GDG+ FTID+EG L
Sbjct: 860 PLFDDIAYETSVYENMPVWTEVLTLNAVDPDSPGM--PVKYTVIDGDGISSFTIDSEGIL 917
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 51/111 (45%), Gaps = 25/111 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F +Y+ATV EN GT V+ + A D D ++SY + + + FTI +G
Sbjct: 3141 NPPRFIQSIYRATVLENMQRGTKVVQVLANDPDSEHF-GRVSYLI--TNDVAAFTIGEDG 3197
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I ++LDRE A Y LT++AVD GTPP
Sbjct: 3198 W---------------------ITTTEMLDRE-AKSTYRLTVKAVDGGTPP 3226
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 21/108 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F + + E+ P+G+ ++ ++A D D G+NSK+ Y + G+ F +D E
Sbjct: 2629 NKPRFESTYERVVISEDLPVGSSIMVVRAVDEDTVGLNSKLQYILEEGNNNATFKLDEET 2688
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ +LK +DRE+ Y L + A D G
Sbjct: 2689 GW--------------------LTLLKEVDREVMD-EYMLIISARDGG 2715
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
P+F Y+A VK+N P T ++ ++A+DAD +NS+I YS+
Sbjct: 89 PIFEKDEYRAEVKQNVPPFTTILQVQASDAD-VALNSQIYYSL 130
>gi|312078374|ref|XP_003141710.1| hypothetical protein LOAG_06126 [Loa loa]
Length = 2498
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+F D Y+ +V EN P+ T V+TL A D D PGM + Y+V GDG+ FTID+EG L
Sbjct: 860 PLFDDIAYETSVYENMPVWTEVLTLNAVDPDSPGM--PVKYTVIDGDGISSFTIDSEGIL 917
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
P+F Y+A VK+N P T ++ ++A+DAD +NS+I YS+
Sbjct: 89 PIFEKDEYRAEVKQNVPPFTTILQVQASDAD-VALNSQIYYSL 130
>gi|443716925|gb|ELU08218.1| hypothetical protein CAPTEDRAFT_222745 [Capitella teleta]
Length = 4539
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/115 (38%), Positives = 55/115 (47%), Gaps = 28/115 (24%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADAD------PPGMNSKISYSVRGGDGLGYFTI 57
PVF DFV+Q VKENQP T V+ L A DAD +S+I Y++ GG G+ FTI
Sbjct: 1004 PVFKDFVFQGRVKENQPPNTSVMRLVATDADTLQNPLASRADSQIVYTITGGSGMRRFTI 1063
Query: 58 DNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
DN G + I LDRE + Y L + A D+GT P
Sbjct: 1064 DNSGVIRTHGI---------------------LDRE-SQAHYWLRVVACDRGTVP 1096
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 16/103 (15%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
V+E+ +GT+ L D D +S + GD G F + P
Sbjct: 232 VEEHGQVGTVYAILYVNDEDYGDNGEILSMEIVAGDPEGIFELKVTDP------------ 279
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
KE+ + V K+L+ + +P+ +NLT+ A D+G PPR T K
Sbjct: 280 ----NKEFALQVAKILEEDSSPVEFNLTVEASDRGQPPRSTQK 318
Score = 45.1 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ V E+ GT+++ + ++DAD N+++SYS+R GD LG F + + G
Sbjct: 2894 NPPQFEQDEYEGAVNEDALPGTIILMVTSSDADL-SPNNQVSYSIREGDPLGQFNVRHTG 2952
Query: 62 PL 63
L
Sbjct: 2953 EL 2954
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 20/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y T+ EN IG+ V+ ++A DAD G NS +SYS + I++
Sbjct: 2787 NPPVFESQHYAVTIMENAEIGSQVLRVEAHDAD-TGANSDLSYS---------YLIEDAQ 2836
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F + + I L LDRE A Y ++ A D+G+PP
Sbjct: 2837 ISNIFAL---------DAESGQISTLVSLDRE-ARDTYEFSVTASDRGSPP 2877
Score = 42.7 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P VY+ V EN G V+ L+A DAD N++++YS+ GD G+F+ID +
Sbjct: 1113 NVPQTEFPVYEPMVPENSDAGHSVVNLEARDADD-SKNNQLTYSIVSGDPQGFFSIDEKS 1171
Query: 62 PL 63
L
Sbjct: 1172 GL 1173
Score = 42.0 bits (97), Expect = 0.082, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 13/86 (15%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID---- 58
AP+F VY+ T+ EN +G ++ + A D D + ISY++ GD LG F ++
Sbjct: 3311 APIFDQSVYRLTIPENTRVGQSILKVSATDLDSAAY-AVISYAIGSGDDLGQFEVNAPDG 3369
Query: 59 --------NEGPLNHFRIVPTKIDPG 76
+ L+H+ +V D G
Sbjct: 3370 VISVAQPLDRESLSHYSLVILATDTG 3395
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 23/109 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGM-NSKISYSVRGGDGLGYFTIDNE 60
NAPV YQ + E+ G+ ++ + A+DAD G NS+I + + G N
Sbjct: 2995 NAPVCEQASYQKIISEDVDTGSFLLRVSASDADEKGTRNSRIKFLLDG----------NH 3044
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
G + H ++ I + LDRE AP Y LT+ AVD G
Sbjct: 3045 GNVFHM-----------NERTGIISIKNSLDRETAP-DYTLTVTAVDGG 3081
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 51/110 (46%), Gaps = 26/110 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ Y + E+ TL++ + A+D D G+ K++Y++ GL F +D E
Sbjct: 3099 NAPVFTQTEYTVGISEHAQKNTLLMRVSASDLD-LGLYRKVNYALEDNGGL--FKMDQES 3155
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLK-LLDREIAPLGYNLTLRAVDKGT 110
IV L LDRE A YN+++ A D+GT
Sbjct: 3156 ---------------------GIVSLNGELDRE-AVAQYNISVYAYDQGT 3183
Score = 35.4 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 18/107 (16%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F YQ + E+ PIG++ +T+ A P G K+ YS+ GD F +
Sbjct: 2156 PSFDQPFYQVDISESLPIGSVAVTIHA--QSPTG--GKLIYSITAGDKYDEFGV------ 2205
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGT 110
HF V G+ I + LD E+ Y LT+RA D T
Sbjct: 2206 -HFSTVFDVDINGS------ITIADKLDYELIT-SYQLTVRATDIDT 2244
>gi|156361305|ref|XP_001625458.1| predicted protein [Nematostella vectensis]
gi|156212293|gb|EDO33358.1| predicted protein [Nematostella vectensis]
Length = 479
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 53/110 (48%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F F+Y++TV+EN P+GT I ++A D D G N+KI Y + G+ F IDN G
Sbjct: 276 NVPTFDRFLYKSTVRENSPVGTTAIKVQAIDTD-TGSNAKIEYIIASGNTNNSFDIDNHG 334
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
F V ID T+K YNLT+ A D G P
Sbjct: 335 ----FVTVNKAIDFETRKI------------------YNLTIMARDCGDP 362
Score = 35.8 bits (81), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N PVFS +Y+A V EN G V+ +KA DAD N ++ YS+
Sbjct: 173 NQPVFSRDLYEAWVLENITAGQFVVQVKAKDADYQ-QNGRLVYSM 216
>gi|395743364|ref|XP_002822394.2| PREDICTED: protocadherin Fat 3 [Pongo abelii]
Length = 4589
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F+ID+E
Sbjct: 1038 LHTPYFPDFAVVGSVKENSRIGTSVLQVTAQDED-SGRDGEIQYSIRDGSGLGRFSIDDE 1096
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I +LDRE Y LT+ A D+G P
Sbjct: 1097 SGV--------------------ITAADILDRETTG-SYWLTVYATDRGVVP 1127
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 2920 NAPVFAQEVYRGNVKESDPPGEVVAVLSTWDRDTSDVNRQVSYHITGGNPRGRFAL---- 2975
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 2976 --------------GLVQSEWKVYVKRPLDREEQDI-YFLNITATD 3006
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS +Y A + E+ +G VI L A D D N +I +S+ GD FT+D
Sbjct: 3337 NPPKFSQDIYSAVISEDALVGDSVILLIAEDVDSQP-NGQIHFSIVNGDRDNEFTVDPVL 3395
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L + V K LDRE GY+L ++AVD G P
Sbjct: 3396 GL--------------------VKVKKKLDRERVS-GYSLLVQAVDSGIP 3424
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F +Y A V E+ P+GT V+T+ A+D D G N I+YS+ + L +
Sbjct: 468 HTPEFQQPLYDAYVNESVPVGTSVLTVSASDKD-KGENGYITYSIASLNLLPFV------ 520
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V + D LD E +P Y +RA D G+P R
Sbjct: 521 -INQFTGVISTTDE--------------LDFESSPEIYRFIVRASDWGSPYRH 558
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI ++A D D PG +ISY++ F ID+ G
Sbjct: 2493 SPTFSQSTYVAEVRENVAAGTKVIHVRATDGD-PGTYGQISYAIINDFAKDRFLIDSNGQ 2551
Query: 63 L 63
+
Sbjct: 2552 V 2552
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 42/90 (46%), Gaps = 19/90 (21%)
Query: 25 VITLKAADADPPGMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYN 83
V+T+ +D G N +I S S+ GD L F + EG EY
Sbjct: 284 VVTVDDSD---DGANGEIESVSIVAGDPLDQFFLAKEGKW---------------LNEYK 325
Query: 84 IVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I K +D E P GYNLTL+A DKG+P +
Sbjct: 326 IKERKQIDWESFPYGYNLTLQAKDKGSPQK 355
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D S+S+ G+ F +D G
Sbjct: 3442 NSPVFTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPPFSFSILSGNEEEEFVLDPHG 3501
Query: 62 PL 63
L
Sbjct: 3502 IL 3503
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 17/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ S+ +Y V EN P VI ++A D D N K++Y + G+ +F I
Sbjct: 1144 NAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSS-NEKLTYRITSGNPQNFFAINIKT 1202
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNI-VVLKLLDR 92
D E HF V T D G K+ I VV+++LD
Sbjct: 1203 GLITTTSRKLDREQQAEHFLEV-TVTDGGPSPKQSTIWVVVQVLDE 1247
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D++
Sbjct: 2390 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYSILSGNDRTSFLMDSKS 2448
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ GT V+ + A D G N++I+Y +R G+ G F
Sbjct: 3232 NPPVFERRDYLVTVPEDTSPGTQVLAVFATSKDI-GTNAEITYLIRSGNEQGKF------ 3284
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
KI+P T I V ++LD E+ Y L + A D GTP
Sbjct: 3285 ----------KINPKTG----GISVSEVLDYELCKRFY-LVVEAKDGGTP 3319
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 24/110 (21%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFR 67
F VKE+ P+G ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 729 FPSDVAVKEDLPVGANILKIKAYDAD-SGFNGKVLFTISDGNTDSCFNIDMETGQLK--- 784
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 785 ------------------VLMPMDREHTDL-YLLNITIYDLGNPQKSSWR 815
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y A + E+ P +++ + A DAD G N I YS+ G +F
Sbjct: 3025 NSPVCDQVAYTALLPEDIPSNKIILKVSAKDAD-IGSNGDIRYSLYGSGNSEFF------ 3077
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+DP + + + L LLDRE P+ Y+L +A D G
Sbjct: 3078 -----------LDPESGE----LKTLALLDRERIPV-YSLMAKATDGG 3109
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F ID
Sbjct: 933 SPAFIPSSYSVKVLEDLPVGTVIAWLETHDPD-LGLGGQVRYSLV-NDYNGRFEID---- 986
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 987 ----------------KASGAIRLSKELDYEKQQF-YNLTVRAKDKGRP 1018
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 25/120 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVF Y A V+ + GTL+ + A D D G N +++Y ++ D G+F I+ N
Sbjct: 2080 NSPVFVGLPYYAAVQVDAEPGTLIYQVTAIDKD-KGPNGEVTYVLQ--DDYGHFEINPNS 2136
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
G N+++ + + +++ + Y +T+ A D G P T P
Sbjct: 2137 G---------------------NVILKEAFNSDLSNIEYGVTILAKDGGKPSLSTSVELP 2175
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 57/111 (51%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F++ +Y+A+V E+ +G+ V+ + A D D G N+++ Y++ G N G
Sbjct: 1562 HSPYFTNPLYEASVFESAALGSAVLQVTALDKD-KGENAELIYTIEAG---------NTG 1611
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F+I P + T KE ++ + + L+++ D+GTPP
Sbjct: 1612 --NTFKIEPV-LGIITICKEPDMTTMG---------QFVLSIKVTDQGTPP 1650
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---------RGGDGL 52
N+PVF Y + E+ IGT +I ++A D D G N +++YSV G+
Sbjct: 827 NSPVFIQDSYSVNILESSGIGTEIIQVEARDKD-LGSNGEVTYSVLTDTQQFAINSSTGI 885
Query: 53 GYFT--IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLL 90
Y +D E N+ + + + ++ +++V LK+
Sbjct: 886 VYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVF 925
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG----LGYFTI 57
N PVF Y + E P+GT + ++A D D G N +++YS+ + F I
Sbjct: 2810 NKPVFETSSYDTIIMEGMPVGTKLTQVRAIDMD-WGANGQVTYSLHSDSQPEKVMEAFNI 2868
Query: 58 D-NEGPLNHFRIVPTKIDP 75
D N G ++ + + + DP
Sbjct: 2869 DSNTGWISTLKDLDHETDP 2887
>gi|126330664|ref|XP_001369066.1| PREDICTED: protocadherin Fat 4 [Monodelphis domestica]
Length = 4980
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 56/120 (46%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y ++ EN P+G+ ++ DAD G NS++SYS+ GD LG FT+D G
Sbjct: 1938 NPPVFSLTSYSTSLMENLPLGSTILIFNVTDADD-GPNSQLSYSITSGDSLGQFTVDKNG 1996
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L V + LDRE YNL ++ D P +Y +T +
Sbjct: 1997 VLK---------------------VRQTLDRESQSF-YNLVIQVHDMPLPSASSYTSTAQ 2034
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS +Y + E PIGT V + A D+D S+ SY + G+ G F+
Sbjct: 3402 PVFSLEIYNVQISEGVPIGTHVTFVSAFDSDSVPNWSRFSYFIGSGNENGAFS------- 3454
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I V LDRE P+ YNLT+ AVD GTP
Sbjct: 3455 ---------INPQTGQ----ITVTAELDRETLPV-YNLTVLAVDLGTP 3488
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS VY+ + E P G+ V + A D D G+N+ + YS+ G+ L +F I
Sbjct: 471 PVFSQLVYRVNLSEEAPPGSYVSGVSATDGD-SGLNANLRYSIISGNELDWFHIS----- 524
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
+H +V T G ++ + VVL + R+
Sbjct: 525 DHSGLVTTAAAGGLDRERASQVVLNISARD 554
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y+ T+ E QP+ +L ++A+D D G N +I+YS+ G+ F I +G
Sbjct: 990 NPPVFDQLSYEVTLSEAQPVNSLFFKVQASDQD-SGANGEIAYSIVEGNTGNAFGIFPDG 1048
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L V +++D + + +VV DR + PL + + V
Sbjct: 1049 QL----YVKSELDRELQDRYVLVVVAS--DRAVEPLSATVNVTVV 1087
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y+ + EN GT ++ + AAD D G N ++ YS+ G+ F +D+
Sbjct: 2148 NNPIFAQALYKVEIDENTLTGTDIVQVYAADGD-EGTNGQVRYSLLRGNENHEFRMDSVT 2206
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ + V K LDRE Y+LT+++VD+G+ PR
Sbjct: 2207 GI--------------------LSVAKPLDRE-KKAAYSLTVQSVDRGSSPR 2237
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G N+ I YS+ G + G F+
Sbjct: 1309 NTPSFPKSTLFVDVLENMRIGELVTSVTATDSD-SGDNADIHYSITGTNNHGTFS----- 1362
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T I + K LD E PL Y L + A D+G PPR +
Sbjct: 1363 -----------ISPNTG----GIFLAKKLDFETQPL-YKLNITAKDQGRPPRSS 1400
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 52/110 (47%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N+ I Y ++ G
Sbjct: 246 NPPVFRSSHYQAGVPEDAVVGSSVLQVTAADAD-EGTNADIRYQLQEDGG---------- 294
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P +DP T I V + LD E A Y+LTL+A D+G P
Sbjct: 295 --------PFHMDPETGL----ITVREPLDYE-ARRQYSLTLQAHDRGVP 331
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ +Y AT+ E+ P G+ V+ + A+DAD N+ ISY + GG+ FT
Sbjct: 2358 NIPTFAHKMYSATISEDAPTGSDVLLVNASDAD-ASTNAVISYRLIGGN--SQFT----- 2409
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I+ LLDRE Y L + + D G P
Sbjct: 2410 -----------INPSTGQ----IITSALLDRETKE-NYTLIVVSSDGGFP 2443
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGY 54
N+PVF Y A ++EN+P G+ + T+ A+D D G N + YS+ GD G+
Sbjct: 683 NSPVFYPVQYFAHIQENEPAGSYITTVSASDPD-SGPNGTVKYSISAGDTSGF 734
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF Y TV EN P GT V+ L A DAD G N+ I+YS++ D F ID
Sbjct: 3190 NSPVFVPEEYSPTVLENAPSGTTVMRLNATDAD-SGSNAVIAYSLQSSDS-DLFVID 3244
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 43/95 (45%), Gaps = 17/95 (17%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD P N IS + GG NE HF + +K
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSPAANGNISVQILGG---------NEQ--RHFEVQRSK 413
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ P I V LDRE P YNLT+ D
Sbjct: 414 V-PNLSL----IKVASALDRERIP-SYNLTVSVSD 442
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 50/117 (42%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMN--SKISYSVRGGDGLGYFTIDN 59
NAPVF + T KE+ G VI A DAD G N SY + GG+ G F +D
Sbjct: 131 NAPVFPEPSIVVTFKEDSSSGRQVILDTATDAD-IGSNGVDHSSYRIVGGNEAGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE A Y L + DKG P R Y
Sbjct: 189 -----------ITLNPSGEGAFLHLVSKGGLDRE-ATAQYQLLVEVEDKGEPKRRGY 233
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P+F + + A + EN TL +T+ A D D G N ++ YS+ G+ I+N
Sbjct: 2665 NSPIFKEDPFVAEILENLSPRTL-LTVSAMDKDS-GPNGQLEYSIVNGN------IENSF 2716
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
++H I ++ LDRE Y LT+RA DKGTP + T
Sbjct: 2717 SIHH--------------STGEIKSIRSLDREKVS-QYVLTVRASDKGTPSQST 2755
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F +YQAT+ E T V+ + A+D D G N +I YSV G+ F ID+
Sbjct: 1204 NAPKFLKDLYQATISELAANLTQVLRVSASDVD-EGSNGQIHYSVVKGNEEKMFAIDS-- 1260
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ + LD E A Y+L ++AVD G
Sbjct: 1261 ------------------ATGQVSLAGQLDHE-ATSSYSLLIQAVDSG 1289
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 24/116 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
++P FS TV E+Q +G++V T+ A D D MN ++Y + G+ G F I+ +
Sbjct: 3085 HSPEFSQSHMSTTVPESQSVGSVVRTVSARDRD-AAMNGLLTYHISSGNEDGLFAINAST 3143
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
G L ++ K LD E+ + +T+ A D G R +Y
Sbjct: 3144 GAL---------------------ILAKPLDYELHQ-KHEMTISATDGGWVARTSY 3177
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 22/113 (19%)
Query: 4 PVFSDFV-YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
PVFS Y+ +V EN P GT ++ ++A+D D G N + +S + ++E
Sbjct: 578 PVFSQEAGYEVSVAENAPAGTDLLVIEASDGD-LGDNGTVRFSFQ----------ESETE 626
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
FR +DP + + + + LDRE Y+L + AVD G+P + +
Sbjct: 627 QRAFR-----LDPVSGR----LSTISSLDREEQAF-YSLLVLAVDLGSPAQSS 669
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N PVFS Y V EN +G V ++ A+ D +N+ I+Y + GD G FTI+
Sbjct: 787 NPPVFSQATYSFVVFENVALGYHVGSVSASTMD---LNTNITYVITTGDQKGVFTINQ 841
Score = 36.2 bits (82), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 21/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F + Y V +N +GT +I + A D G NS++ Y I NE
Sbjct: 2979 NAPQFLNSKYFTPVTKNVRVGTKLIKVTAVDDKDFGANSEVEY-----------FISNES 3027
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+ F K+D T ++ L++ + +T+ A DKG PP
Sbjct: 3028 PVEKF-----KLDSTTGWISVASSLMSNLNQ-----NFMMTVTARDKGNPP 3068
>gi|47216302|emb|CAF96598.1| unnamed protein product [Tetraodon nigroviridis]
Length = 240
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 22/113 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+F FV + +KE+ IGT V+T+ A D D G + ++ YS+R G GLG FTID E +
Sbjct: 16 PLFRSFVEKGFIKEDALIGTPVMTITAEDEDK-GQDGEVRYSIRDGSGLGIFTIDEETGI 74
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
I +LLD E P Y LT+ A+D+G P +
Sbjct: 75 --------------------IRTQELLDHETTP-HYWLTVYAMDRGVVPLSAF 106
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP S+ VY +V EN P +I + A D D + ++SY + G+ G+F+I+
Sbjct: 119 NAPQTSEPVYYPSVMENSPKDVSIIQINAIDPDTKA-SDRLSYRITSGNPQGFFSIN 174
>gi|348566837|ref|XP_003469208.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1-like [Cavia
porcellus]
Length = 4579
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 58/116 (50%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVFS FV + VKE+ PIG+ V+T+ A D D G + +I YS+R G G+G F ID E
Sbjct: 1030 LHTPVFSSFVEKGIVKEDVPIGSSVMTVSARDED-TGRDGEIRYSIRDGSGVGVFKIDEE 1088
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE + Y LT+ A D+G P ++
Sbjct: 1089 TGV--------------------IETSDRLDRE-STSHYWLTVYATDQGVVPLSSF 1123
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 56/112 (50%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS Y A + E+ + VIT+ A DAD P + S I YS+ G+ G FTID
Sbjct: 3332 NTPAFSQDTYTAVISEDAVLEQSVITVMADDADGP-LYSLIHYSIIEGNQGGPFTID--- 3387
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P K + + V KLLDRE GY LT++A D G+PPR
Sbjct: 3388 --------PVKGE---------VKVTKLLDRETIS-GYTLTIQASDNGSPPR 3421
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N +++Y + GGD LG F ++N
Sbjct: 2917 PRFTAEIYKGTVSEDDPPGGVIAILSTTDADSEEINRQVTYFITGGDALGQFAVEN---- 2972
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE Y LT+ A D
Sbjct: 2973 --------------IQNEWKVYVKKPLDREKKD-SYLLTITATD 3001
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 56/112 (50%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y TV EN GTL+ ++A DAD G+N KISYS+ G F+I++
Sbjct: 3122 NAPEFTADPYTITVFENTEPGTLLTRVQATDAD-TGLNRKISYSLIDSAN-GQFSINDIS 3179
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I + K LDRE + Y LTL+AVD+G P R
Sbjct: 3180 GI--------------------IQLEKPLDREQQAV-YTLTLKAVDQGLPRR 3210
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 52/110 (47%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ IGT V+ L AA D N++I+YS+ G+ G F+ID
Sbjct: 3227 NPPVFEYREYGATVSEDVLIGTEVLQLYAASRDIEA-NAEITYSIISGNEHGKFSID--- 3282
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I +++ LD E A Y LT+ A D GTP
Sbjct: 3283 -----------------AKTGAIFIIENLDYESAH-EYYLTVEATDGGTP 3314
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKENQP+G+ VI + A D D G N K+ Y++ GG+ F ID E +
Sbjct: 727 VKENQPVGSNVIFMNATDLD-SGFNGKLVYAISGGNEDSCFIIDMETGM----------- 774
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ +L LDRE Y L + D G P + ++
Sbjct: 775 ---------LKILSPLDRETTD-KYTLNMTVYDLGIPQKAAWR 807
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 10 VYQATVKENQPIGTLV-ITLKAADADPPGMNSKISYSVRGGDG-LGYFTIDNEGPLNHFR 67
V+ E P+ T V ++ D DP + +G +G + +I L FR
Sbjct: 246 VHVEQANECAPVITAVTLSPSELDRDPTYAIVTVDDCDQGANGEIASLSIVAGDLLQQFR 305
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
V + PG+K EY + + +D + P GYNLTL+A DKGTPP+
Sbjct: 306 TVRSF--PGSK--EYKLKAISSIDWDSHPFGYNLTLQAKDKGTPPQ 347
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ +G++V+ + A D D G N+++ YS+ G+ FTID
Sbjct: 1559 HAPWFTSSSYEGRVYESAAVGSVVLQVTALDKD-KGKNAEVVYSIESGNIGNSFTID--- 1614
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+ +I K LDR Y+L ++A DKG PP
Sbjct: 1615 PILG-----------------SIKTAKELDRSHQE-EYDLMVKAADKGNPP 1647
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 49/112 (43%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A+ EN IGT V+ + A D D G N ++YS+ + + +
Sbjct: 460 NPPEFTQTAYRASFDENALIGTTVLRVSAVDPD-DGENGYVTYSIANVNPVPFV------ 512
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+NHF G N LD E+ P Y L +RA D G P R
Sbjct: 513 -INHFT--------GAVSTSEN------LDYELMPRVYTLRIRASDWGLPYR 549
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 50/111 (45%), Gaps = 20/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y AT+ E IGT V+ ++A D+D N ISY + G +
Sbjct: 2280 NPPVFVQQSYSATLSEASVIGTSVVQVRATDSDSEP-NRGISYQMFGNHSKSH------- 2331
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+HF I T G I +L+ LD E + + +RA+D G PP
Sbjct: 2332 --DHFHIDSTT---GL------ISLLRTLDYE-QFQQHKIFVRAIDGGMPP 2370
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P+F +Y+A + E+ G V +KA DAD ++ ++ YS+ G+ F ID+E
Sbjct: 2387 NPPLFDQQIYEAKISEHAIHGHFVTCVKAYDADSSDID-RLEYSILSGNDHKNFVIDSE 2444
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 23/101 (22%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
Y+ V+E+ P GT+++ L+A D D G +S++ YS+ G G F +D
Sbjct: 933 YRVKVREDLPEGTIIMWLEAYDPD-VGQSSQVRYSLL-DHGEGNFDVD------------ 978
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT+RA DKG P
Sbjct: 979 --------KLSGAVRIVQQLDFERKQV-YNLTVRAKDKGKP 1010
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 55/114 (48%), Gaps = 10/114 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS Y ++EN+P+G V+ L D D +S+ G+ F ++ +G
Sbjct: 3437 NAPLFSKGNYSVIIQENKPVGFSVLQLVVTDKDSSHNGPPFFFSIVSGNDDRVFEVNQQG 3496
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR---EIAPLGYNLTLRAVDKGTPP 112
L + K+ K++ ++ +K+ D +++ L + + +R +++ P
Sbjct: 3497 VLLTSAAIQRKV------KDHYLLHVKVADNGKPQLSSLTH-IDIRVIEESIHP 3543
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 49/114 (42%), Gaps = 21/114 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S+ VY + EN P V+ ++A D D N K+ Y + G+ G+F+I +
Sbjct: 1136 NAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSS-NDKLMYKITSGNPQGFFSIHPKT 1194
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
L I T + LDRE + L + D GTPP+ T
Sbjct: 1195 GL----ITTTS---------------RRLDREQQD-EHILEVTVTDNGTPPKST 1228
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
+++PVF Y+ + EN P+ TLVI +KA D D G+ I+Y++
Sbjct: 2488 LHSPVFPQNEYEVELAENAPVHTLVIEVKATDRD-SGIYGHITYNI 2532
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 20/114 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y+ + N GT VI + A+DAD G N+ + Y++ D+E
Sbjct: 2593 NAPQFRATKYEVNIGSNAAKGTSVIKVFASDAD-EGSNADVIYAIEA---------DSES 2642
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I K+ KE L L+ E + +RAVD G+PP+E+
Sbjct: 2643 VKENLEI--NKLTGVITTKE----SLIGLENEF----FTFFVRAVDNGSPPKES 2686
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTID 58
N+PV Y+A + EN P G+ VI ++A+D D G+N + YS+ + D + F I+
Sbjct: 2806 NSPVLESNPYEAFIVENLPGGSRVIQIRASDLD-SGLNGHVMYSLDQSQSVDIIESFAIN 2864
Query: 59 NE 60
E
Sbjct: 2865 AE 2866
>gi|390469946|ref|XP_002754762.2| PREDICTED: protocadherin Fat 3 [Callithrix jacchus]
Length = 1221
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F+ID+E
Sbjct: 1020 LHTPYFPDFAVVGSVKENSRIGTSVLQVTAQDED-SGRDGEIQYSIRDGSGLGRFSIDDE 1078
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I +LDRE Y LT+ A D+G P
Sbjct: 1079 SGV--------------------ITAADILDRETTG-SYWLTVYATDRGVVP 1109
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F +Y V E+ P+GT V+T+ A+D D G N I+YS+ + L +
Sbjct: 468 HTPEFQQLLYDTFVNESVPVGTSVLTVSASDKD-KGENGYITYSIASLNLLPF------- 519
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 520 AINQFTGV--------------ISTTEELDFESSPEIYRFIVRASDWGSPYRH 558
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 36/78 (46%), Gaps = 16/78 (20%)
Query: 37 GMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIA 95
G N +I S S+ GD L F + EG EY I K +D E
Sbjct: 293 GANGEIESVSIMAGDPLDQFFLAKEGKW---------------LNEYKIKERKQIDWESF 337
Query: 96 PLGYNLTLRAVDKGTPPR 113
P G+NLTL+A DKG+P +
Sbjct: 338 PYGFNLTLQAKDKGSPQK 355
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 24/110 (21%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFR 67
F VKE+ P+G ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 729 FPSDVAVKEDLPVGANILKIKAYDAD-SGFNGKVLFTISDGNTDSCFNIDMETGQLK--- 784
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 785 ------------------VLMPMDREHTDL-YLLNITIYDLGNPQKSSWR 815
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---------RGGDGL 52
N+PVF Y + E+ IGT +I ++A D D G N +++YSV G+
Sbjct: 827 NSPVFIQDSYSVNILESSSIGTEIIQVEARDKD-LGSNGEVTYSVLTDTQQFAINSSTGI 885
Query: 53 GYFT--IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLL 90
Y +D E N+ + + + ++ +++V LK+
Sbjct: 886 VYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVF 925
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP+ S+ +Y V EN P VI ++A D D N K++Y + G+ +F I+
Sbjct: 1126 NAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSS-NEKLTYRITSGNPQNFFAIN 1181
>gi|19924085|ref|NP_612553.1| protocadherin Fat 3 precursor [Rattus norvegicus]
gi|81867062|sp|Q8R508.1|FAT3_RAT RecName: Full=Protocadherin Fat 3; AltName: Full=FAT tumor suppressor
homolog 3; Flags: Precursor
gi|19773543|dbj|BAB86869.1| fat3 [Rattus norvegicus]
Length = 4555
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F ID+E
Sbjct: 1037 LHTPYFPDFAVVGSVKENSRIGTSVLQVTAHDED-SGRDGEIQYSIRDGSGLGRFNIDDE 1095
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I +LDRE Y LT+ A D+G P
Sbjct: 1096 SGV--------------------ITAADILDRETTA-SYWLTVYATDRGVVP 1126
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 2919 NAPVFAHEVYRGNVKESDPPGEVVAVLSTLDKDTSNINRQVSYHITGGNPRGRFAL---- 2974
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 2975 --------------GMVQSEWKVYVKRPLDREEQDI-YFLNITASD 3005
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F + +Y+ V E+ P+GT V+T+ A+D D G N I+YS+ + L +
Sbjct: 467 HTPEFQETLYETFVNESVPVGTNVLTVSASDKD-KGENGYITYSIASLNLLPF------- 518
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 519 AINQFTGV--------------ISTTEELDFESSPETYRFIVRASDWGSPYRH 557
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y A++ E+ P +++ + A DAD G N I YS+ G +F
Sbjct: 3024 NSPVCDQVAYSASLPEDIPSNKIILKVSAKDAD-IGSNGDIRYSLYGSGNSDFF------ 3076
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+DP + + + L LLDRE P+ YNL RA D G
Sbjct: 3077 -----------LDPESGE----LKTLALLDRERVPV-YNLIARATDGG 3108
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 25/109 (22%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI ++A D D PG ++SYS+ F ID+ G
Sbjct: 2492 SPAFSQSTYVAEVRENAASGTKVIHVRATDGD-PGTYGQVSYSIINDFAKDRFLIDSNG- 2549
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLT--LRAVDKG 109
I+ + LDRE PL +++ LRA+D G
Sbjct: 2550 --------------------QIITTERLDRE-NPLEGDISIYLRALDGG 2577
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 53/114 (46%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ +GT V+++ A D G N++I+Y +R G+ G F
Sbjct: 3231 NPPVFERRDYLVTVPEDTSLGTQVLSVFATSKD-IGTNAEITYLIRSGNEQGKF------ 3283
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+I+P T I VL+ LD E+ Y L + A D GTP T
Sbjct: 3284 ----------RINPKTG----GISVLEALDYEMCKRFY-LVVEAKDGGTPALST 3322
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS VY A + E+ G VI L A D D N +I +S+ GGD F +D
Sbjct: 3336 NPPRFSQDVYSAVISEDALEGDSVILLIAEDVDSKP-NGQIRFSIVGGDRDNEFAVD--- 3391
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P+ +V K K LDRE GY+L ++AVD G P
Sbjct: 3392 PI--LGLVKVK---------------KKLDRERVS-GYSLLIQAVDSGIP 3423
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 17/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ S+ +Y V EN P VI ++A D D G N K++Y + G+ +F I
Sbjct: 1143 NAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPD-SGSNEKLTYRITSGNPQNFFAINIKT 1201
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNI-VVLKLLDR 92
D E HF V T D G+ K+ I VV+++LD
Sbjct: 1202 GLITTTSRKLDREQQAEHFLEV-TVTDGGSSPKQSTIWVVVQVLDE 1246
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 24/110 (21%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFR 67
F VKEN P+GT ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 728 FPSDVAVKENMPVGTNILKIKAYDAD-SGFNGKVLFTISDGNTDSCFNIDMETGQLK--- 783
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 784 ------------------VLMPMDREHTDL-YVLNITIYDLGKPQKSSWR 814
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 25/120 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVF Y A V+ + GTL+ + A D D G N +++Y ++ D G+F I+ N
Sbjct: 2079 NSPVFVGLPYYAAVQVDAEPGTLIYRVTAIDKDK-GANGEVTYVLQ--DDYGHFEINPNS 2135
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
G N+++ + + +++ + Y +T+ A D GTP T+ P
Sbjct: 2136 G---------------------NVILKEAFNSDLSNIDYGVTILAKDGGTPSLSTFVELP 2174
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D S+S+ G+ F +D+ G
Sbjct: 3441 NSPVFTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPPFSFSILSGNEDEEFMLDSHG 3500
Query: 62 PL 63
L
Sbjct: 3501 IL 3502
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A V EN L+ ++A D D G+N K+ YS+ G F+ID+
Sbjct: 3126 NPPVFSSNHYTACVYENTATKALLTRVQAVDPD-VGINRKVVYSLEDS-ASGVFSIDSSS 3183
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ IV+ + LDRE YN+++RA D+
Sbjct: 3184 GV--------------------IVLEQPLDRE-QQSSYNISVRATDQS 3210
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D++
Sbjct: 2389 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYSILSGNDRTSFLMDSKS 2447
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 12/100 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---------RGGDGL 52
N+PVF Y ++ E+ IGT +I ++A D D G N +++YSV G+
Sbjct: 826 NSPVFLQDSYSVSILESSSIGTEIIQVEARDKD-LGSNGEVTYSVLTDTHQFVINSSTGI 884
Query: 53 GYFT--IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLL 90
Y +D E N+ + + + ++ +++V LK+
Sbjct: 885 VYIADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKIF 924
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 58/111 (52%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F++ +Y+A+V E+ +G++V+ + A D D G N+++ YS+ G N G
Sbjct: 1561 HSPYFTNPLYEASVFESAALGSVVLQVTALDKD-KGENAELIYSIEAG---------NTG 1610
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F+I P + T KE ++ + + L+++ D+G+PP
Sbjct: 1611 --NTFKIEPV-LGIITISKEPDMTAMG---------QFVLSVKVTDQGSPP 1649
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL----GYFTI 57
N PVF Y+ + E P+GT + ++A D D G N +++YS+ L F I
Sbjct: 2809 NKPVFETSSYETIIMEGMPVGTKLAQVRAIDTD-WGANGQVTYSLHSDSHLEKVMEAFNI 2867
Query: 58 D-NEGPLNHFRIVPTKIDP 75
D N G ++ + + + DP
Sbjct: 2868 DSNTGWISTLKDLDHETDP 2886
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F ID
Sbjct: 932 SPAFIPSSYSVKVLEDLPVGTVIAWLETQDPD-LGLGGQVRYSLV-NDYNGRFEID---- 985
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 986 ----------------KASGAIRLSKELDYEKQQF-YNLTVRAKDKGRP 1017
>gi|355750344|gb|EHH54682.1| hypothetical protein EGM_15570 [Macaca fascicularis]
Length = 4349
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ FVYQ V+EN P GT V+ + A D D G++ ++ Y +R G GL F+I+ +
Sbjct: 1027 LHPPHFASFVYQGQVQENSPSGTQVMVVAAQD-DDSGLDGELQYFLRAGTGLAAFSINQD 1085
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I L LDRE A Y LT+ AVD+G+ P
Sbjct: 1086 TGM--------------------IQTLAPLDREFASY-YWLTVLAVDRGSVP 1116
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 53/109 (48%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y V EN +G +++T+ A D D P +NS I+YS+ GG+ LG+FTI
Sbjct: 3319 PQFPQDPYSTRVLENALVGDVILTVSATDEDGP-LNSDITYSLVGGNQLGHFTI------ 3371
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+ + V K LD E A Y+L LRA D G PP
Sbjct: 3372 --------------HPKKGELQVAKALDWEQAS-SYSLKLRATDSGQPP 3405
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 41/92 (44%), Gaps = 18/92 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y+ +V EN G LV+TLK DAD N +++ + GD LG F I G
Sbjct: 2902 NAPRFASEEYRGSVVENSEPGKLVVTLKTLDADISEQNRQVTCYITEGDPLGQFGISQVG 2961
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
E+ I K LDRE
Sbjct: 2962 ------------------DEWRISSRKTLDRE 2975
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++ P F+ Y+A+V + GT ++ ++A DAD G+N+++ YS+ G+G G+F I+
Sbjct: 1550 LHPPCFTQLHYEASVPDTIVPGTELLQVRATDAD-RGVNAEVHYSLLKGNGEGFFNIN 1606
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P FS VY ++ E P T VI L A+D D G N +SY + G D +F I+
Sbjct: 2268 NPPTFSQLVYTTSISEGLPAQTPVIQLLASDRD-SGQNRDVSYQIVEDGSDVSKFFQIN- 2325
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G+ + + ++ LD E A +++ +RA+DKG PP
Sbjct: 2326 ----------------GSTGE---MSTVQELDYE-AQQHFHVKVRAMDKGDPP 2358
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNE 60
N P F Y TV+EN PIG+ V+ L +D D P S+ + +G DG
Sbjct: 3422 NPPRFFQLNYSTTVQENSPIGSKVLQLILSDPDSPENGPPYSFQITKGNDG--------- 3472
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ FR+ P +V + L R A Y L ++A D G PP
Sbjct: 3473 ---SAFRVTPDGW----------LVTAEGLSRR-AQEWYQLQIQASDSGIPP 3510
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 47/112 (41%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP+F+ Y T+ EN P GT V+ + A D D G N ++YS+ G L
Sbjct: 454 HAPIFNRSSYDGTLDENIPPGTSVLAVTATDRD-HGENGYVTYSIAGPKAL--------- 503
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P IDP I K D E+ Y +RA D G+P R
Sbjct: 504 --------PFSIDPYLGI----ISTSKPTDYELMKRIYTFRVRASDWGSPFR 543
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P S V+ +++E+ P+GT V+ L A D D K+++++ G+ +G+F I
Sbjct: 1133 NPPQMSQAVFYPSIQEDAPVGTSVLQLDAWDPDSSS-KGKLTFNITSGNHMGFFIIH--- 1188
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLD 91
P+ ++D + K+ +I+ + +LD
Sbjct: 1189 PVTGLLSTARQLD--RENKDEHILEVTVLD 1216
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR---GGDGLGYFTID 58
N PVF Y+A + EN P+GT VI + A D D G + ++SY + G + F ID
Sbjct: 2793 NRPVFEADPYKAVLTENMPVGTSVIQVTAIDKD-TGRDGQVSYRLSADPGSNVHELFAID 2851
Query: 59 NEG 61
+E
Sbjct: 2852 SES 2854
>gi|355691768|gb|EHH26953.1| hypothetical protein EGK_17044 [Macaca mulatta]
Length = 4349
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ FVYQ V+EN P GT V+ + A D D G++ ++ Y +R G GL F+I+ +
Sbjct: 1027 LHPPHFASFVYQGQVQENSPSGTQVMVVAAQD-DDSGLDGELQYFLRAGTGLAAFSINQD 1085
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I L LDRE A Y LT+ AVD+G+ P
Sbjct: 1086 TGM--------------------IQTLAPLDREFASY-YWLTVLAVDRGSVP 1116
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 53/109 (48%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y V EN +G +++T+ A D D P +NS I+YS+ GG+ LG+FTI
Sbjct: 3319 PQFPQDPYSTRVLENALVGDVILTVSATDEDGP-LNSDITYSLVGGNQLGHFTI------ 3371
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+ + V K LD E A Y+L LRA D G PP
Sbjct: 3372 --------------HPKKGELQVAKALDWEQAS-SYSLKLRATDSGQPP 3405
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 41/92 (44%), Gaps = 18/92 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y+ +V EN G LV+TLK DAD N +++ + GD LG F I G
Sbjct: 2902 NAPRFASEEYRGSVVENSEPGKLVVTLKTLDADISEQNRQVTCYITEGDPLGQFGISQVG 2961
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
E+ I K LDRE
Sbjct: 2962 ------------------DEWRISSRKTLDRE 2975
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++ P F+ Y+A+V + GT ++ ++A DAD G+N+++ YS+ G+G G+F I+
Sbjct: 1550 LHPPCFTQLHYEASVPDTIVPGTELLQVRATDAD-RGVNAEVHYSLLKGNGEGFFNIN 1606
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P FS VY ++ E P T VI L A+D D G N +SY + G D +F I+
Sbjct: 2268 NPPTFSQLVYTTSISEGLPAQTPVIQLLASDRD-SGQNRDVSYQIVEDGSDVSKFFQIN- 2325
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G+ + + ++ LD E A +++ +RA+DKG PP
Sbjct: 2326 ----------------GSTGE---MSTVQELDYE-AQQHFHVKVRAMDKGDPP 2358
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNE 60
N P F Y TV+EN PIG+ V+ L +D D P S+ + +G DG
Sbjct: 3422 NPPRFFQLNYSTTVQENSPIGSKVLQLILSDPDSPENGPPYSFQITKGNDG--------- 3472
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ FR+ P +V + L R A Y L ++A D G PP
Sbjct: 3473 ---SAFRVTPDGW----------LVTAEGLSRR-AQEWYQLQIQASDSGIPP 3510
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 47/112 (41%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP+F+ Y T+ EN P GT V+ + A D D G N ++YS+ G L
Sbjct: 454 HAPIFNRSSYDGTLDENIPPGTSVLAVTATDRD-HGENGYVTYSIAGPKAL--------- 503
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P IDP I K D E+ Y +RA D G+P R
Sbjct: 504 --------PFSIDPYLGI----ISTSKPTDYELMKRIYTFRVRASDWGSPFR 543
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P S V+ +++E+ P+GT V+ L A D D K+++++ G+ +G+F I
Sbjct: 1133 NPPQMSQAVFYPSIQEDAPVGTSVLQLDAWDPDSSS-KGKLTFNITSGNHMGFFIIH--- 1188
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLD 91
P+ ++D + K+ +I+ + +LD
Sbjct: 1189 PVTGLLSTARQLD--RENKDEHILEVTVLD 1216
Score = 38.9 bits (89), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR---GGDGLGYFTID 58
N PVF Y+A + EN P+GT VI + A D D G + ++SY + G + F ID
Sbjct: 2793 NRPVFEADPYKAVLTENMPVGTSVIQVTAIDKD-TGRDGQVSYRLSADPGSNVHELFAID 2851
Query: 59 NEG 61
+E
Sbjct: 2852 SES 2854
>gi|354475386|ref|XP_003499910.1| PREDICTED: protocadherin Fat 3-like [Cricetulus griseus]
Length = 4555
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F+ID+E
Sbjct: 1037 LHMPYFPDFAVVGSVKENSRIGTSVLQVTAHDEDS-GRDGEIQYSIRDGSGLGRFSIDDE 1095
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I +LDRE Y LT+ A D+G P
Sbjct: 1096 SGV--------------------ITAADILDRETTG-SYWLTVYATDRGVVP 1126
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 2919 NAPVFAHEVYRGNVKESDPPGEVVAVLSTLDKDTSNINRQVSYHITGGNPRGRFAL---- 2974
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 2975 --------------GMVQSEWKVYVKRPLDREEQDV-YFLNITASD 3005
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F VY+ V E+ P+GT V+T+ A+D D G N I+YS+ + L +
Sbjct: 467 HTPEFQQTVYETFVNESIPVGTNVLTVSASDKD-KGENGYITYSIASLNLLPF------- 518
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 519 AINQFTGV--------------ISTTEELDFESSPETYRFIVRASDWGSPYRH 557
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS VY A + E+ G VI L A D D N +I +S+ GGD F +D
Sbjct: 3336 NPPQFSQDVYSAVISEDALEGDSVILLIAEDVDSKP-NGQIRFSIVGGDRDNEFAVD--- 3391
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P+ +V K K LDRE GY+L ++AVD G P
Sbjct: 3392 PI--LGLVKVK---------------KKLDRERVS-GYSLLIQAVDSGIP 3423
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P+ Y A++ E+ P +++ + A DAD G N I YS+ G +F
Sbjct: 3024 NSPICDQVAYSASLPEDIPSNKIILKVSAKDAD-IGSNGDIRYSLYGSGNTEFF------ 3076
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+DP + + + L LLDRE P+ YNL RA D G
Sbjct: 3077 -----------LDPESGE----LKTLALLDRERVPV-YNLIARATDGG 3108
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 17/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ S+ +Y V EN P VI ++A D D G N K++Y + G+ +F I
Sbjct: 1143 NAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPD-SGSNEKLTYRITSGNPQNFFAINIKT 1201
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNI-VVLKLLDR 92
D E HF V T D G+ K+ I VV+++LD
Sbjct: 1202 GLITTTSRKLDREQQAEHFLEV-TVTDGGSSPKQSTIWVVVQVLDE 1246
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 49/109 (44%), Gaps = 25/109 (22%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI + A D D PG +ISYS+ F ID+ G
Sbjct: 2492 SPAFSQSTYVAEVRENAASGTKVIHVPATDGD-PGTYGQISYSIINDFAKDRFLIDSNG- 2549
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLT--LRAVDKG 109
I+ + LDRE PL +++ LRA+D G
Sbjct: 2550 --------------------QIITTERLDRE-NPLEGDISIYLRALDGG 2577
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ +GT V+++ A D G N++I+Y +R G+ G F
Sbjct: 3231 NPPVFERRDYLVTVPEDTSLGTQVLSVFATSKD-IGTNAEITYLIRSGNEQGKF------ 3283
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+I+P T I VL+ LD E Y L + A D GTP
Sbjct: 3284 ----------RINPKTG----GISVLEALDYETCKRFY-LVVEAKDGGTP 3318
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D S+S+ G+ F +D+ G
Sbjct: 3441 NSPVFTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPPFSFSILSGNEDEEFVLDSHG 3500
Query: 62 PL 63
L
Sbjct: 3501 IL 3502
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 25/117 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A V EN L+ ++A D D G+N K+ YS+ G F+ID+
Sbjct: 3126 NPPVFSSNHYTACVYENTATKALLTRVQAMDPD-VGINRKVVYSLEDS-ASGVFSIDSSS 3183
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
+ I++ + LDRE YN+++RA D+ PR++ +
Sbjct: 3184 GV--------------------IILERPLDRE-QQSSYNISVRATDQS--PRQSLSS 3217
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 49/110 (44%), Gaps = 24/110 (21%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFR 67
F VKE+ P+GT ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 728 FPSDVAVKEDMPVGTNILKIKAYDAD-SGFNGKVLFTISDGNTDSCFNIDMETGQLK--- 783
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 784 ------------------VLMPMDREHRDL-YLLNITIYDLGKPQKSSWR 814
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D++
Sbjct: 2389 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYSILSGNDRTSFLMDSKS 2447
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F+ +Y+A+V E+ +G++V+ + A D D G N+++ YS+ G N G
Sbjct: 1561 HSPYFTSPLYEASVFESAALGSVVLQVTALDKD-KGENAELIYSIEAG---------NTG 1610
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F+I P + T KE ++ + + L+++A D+G+PP
Sbjct: 1611 --NTFKIEPV-LGIITISKEPDMTAMG---------QFVLSVKATDQGSPP 1649
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL----GYFTI 57
N PVF Y+ + E P+GT + ++A D D G N +++YS+ L F I
Sbjct: 2809 NKPVFETSSYETIIMEGMPVGTKLAQVRAIDMD-WGANGQVTYSLHSDSHLEKVMEAFDI 2867
Query: 58 D-NEGPLNHFRIVPTKIDPG 76
D N G ++ + + + DP
Sbjct: 2868 DSNTGWISTLKDLDHETDPA 2887
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F ID
Sbjct: 932 SPAFIPTSYSVKVLEDLPVGTVIAWLETQDPD-LGLGGQVRYSLI-NDYNGRFEID---- 985
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 986 ----------------KASGAIRLSKELDYEKQQF-YNLTVRAKDKGRP 1017
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 25/111 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVF Y A V+ + GTL+ + A D D G N +++Y ++ D G+F I+ N
Sbjct: 2079 NSPVFVGLPYYAAVQVDAEPGTLIYRVTAIDKD-KGANGEVTYILQ--DDYGHFEINPNS 2135
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
G N+++ + + +++ + Y +T+ A D G P
Sbjct: 2136 G---------------------NVILKEAFNSDLSNIDYGVTILAKDGGNP 2165
Score = 36.2 bits (82), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 16/78 (20%)
Query: 37 GMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIA 95
G N +I S S+ GD L F + EG EY + + +D E
Sbjct: 292 GANGEIESVSIVAGDPLDQFFLAKEGKW---------------MNEYKVKERRQVDWESF 336
Query: 96 PLGYNLTLRAVDKGTPPR 113
GYNLTL+A DKG+P +
Sbjct: 337 SYGYNLTLQAKDKGSPQK 354
>gi|300796778|ref|NP_001179501.1| protocadherin Fat 2 precursor [Bos taurus]
Length = 4347
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ FV+Q V+EN P GT V+ + A D D G++ ++ Y +RGG GL F+I+ +
Sbjct: 1023 LHPPRFASFVHQGQVQENSPSGTSVMVVAAHD-DDTGLDGELQYFLRGGTGLAAFSINQD 1081
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I L LDRE A Y LT+ AVD+G+ P
Sbjct: 1082 TGM--------------------IQTLAPLDREFASC-YWLTVLAVDRGSIP 1112
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 53/108 (49%), Gaps = 22/108 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F +Y V EN +G +V+T+ A D D P +NS I+YS+ GG+ LG
Sbjct: 3317 PRFPQHLYSTRVLENAIVGDVVLTVSATDEDGP-VNSAITYSLIGGNQLG---------- 3365
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
HF I P KK E + V K LD E Y+L LRA D G P
Sbjct: 3366 -HFAIHP-------KKGE--LQVAKALDWEQTS-SYSLKLRATDSGQP 3402
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 39/92 (42%), Gaps = 18/92 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y+ +V EN G V TLK DAD N +++ + GD LG F I G
Sbjct: 2900 NAPRFASEDYRGSVVENSEPGEPVATLKTLDADIAEQNRQVTCYITEGDPLGQFGISQVG 2959
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
E+ I K LDRE
Sbjct: 2960 ------------------DEWRIFSRKTLDRE 2973
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P FS VY ++ E P T VI L A+D D G N +SY + G D +F I+
Sbjct: 2264 NPPTFSQLVYTTSISEGLPAQTPVIQLLASDQD-SGQNRDVSYQIVEDGSDVSKFFQIN- 2321
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G+ + + ++ LD E A +++ +RA+D+G PP
Sbjct: 2322 ----------------GSTGE---MSTVQELDYE-AQQHFHVKVRAMDRGDPP 2354
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 49/113 (43%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+APVF+ Y T EN P GT V+T+ A D D G N I+YS+ +
Sbjct: 450 HAPVFNRSSYDGTFDENIPPGTSVLTVTATDQD-HGENGYITYSITRPNA---------- 498
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
VP IDP I K +D E+ Y +RA D G+P R+
Sbjct: 499 -------VPFSIDPYLGI----ISTSKPMDYELMNRIYTFRVRASDWGSPFRQ 540
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P S V+ TV+E+ P+ T V+ L A D D K+++++ G+ +G+F +
Sbjct: 1129 NPPQMSRPVFYPTVREDAPLHTSVLQLDAWDLDSSS-KGKLTFNITSGNHMGFFVLH--- 1184
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLD 91
PL ++D + K+ +I+ + +LD
Sbjct: 1185 PLTGLLATARQLD--RENKDEHILEVTVLD 1212
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 18/109 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNE 60
N P F Y +V+EN PIG+ V+ L +D D P S+ + +G DG
Sbjct: 3420 NPPRFFQLNYSTSVQENAPIGSKVLQLILSDPDSPENGPPFSFRITKGNDGFA------- 3472
Query: 61 GPLNHFRIVP-----TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLR 104
FR+ P T + +E+ + +++ D I PL + +++
Sbjct: 3473 -----FRVTPDGWLVTTAGLSKRVQEWYKLQIEVSDSGIPPLSSSTSVK 3516
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTID 58
N P+F Y+A + EN P+GT VI + A D D G + ++SY + G + F ID
Sbjct: 2791 NRPIFEADPYKAVLTENMPVGTSVIQVTANDQD-TGDDGQVSYRLPVDPGSNIHELFAID 2849
Query: 59 NE 60
+E
Sbjct: 2850 SE 2851
>gi|344277382|ref|XP_003410481.1| PREDICTED: protocadherin Fat 4 [Loxodonta africana]
Length = 4980
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 56/120 (46%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y ++ E P+G+ V+ DAD G+NS+++YS+ GD LG FT+D G
Sbjct: 1940 NPPIFSLNSYSTSLMETLPLGSTVLVFNVTDADD-GINSQLAYSIASGDSLGQFTVDQNG 1998
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L VLK LDRE YNL ++ D P Y +T +
Sbjct: 1999 VLK---------------------VLKALDRESQSF-YNLVVQVHDLPQLPASRYTSTAQ 2036
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS +Y + E PIGT V + A D+D S+ SY + G+ G F+
Sbjct: 3402 PVFSLNIYNVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGAFS------- 3454
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I V LDRE P+ YNLT+ AVD GTP
Sbjct: 3455 ---------INPQTGQ----ITVTAELDRETLPI-YNLTVLAVDSGTP 3488
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 55/112 (49%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y+ + EN GT +I + AAD D G N ++ Y + GG+ F ID+
Sbjct: 2150 NNPIFAQALYKVEINENTLTGTDIIQVYAADGD-EGTNGQVRYGIVGGNVNQEFRIDSV- 2207
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
GT I V K LDRE P Y LT++A D+G+ PR
Sbjct: 2208 -------------TGT------ITVAKPLDREKTPT-YFLTVQATDRGSTPR 2239
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ VY+ + E P G+ V + A D D G+N+ + YS+ G+ LG+F I
Sbjct: 473 PVFTQQVYRVNLSEEAPPGSYVSGVSATDGD-SGLNANLRYSIVSGNELGWFYIS----- 526
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T G LDRE+A L L + A D G P+ +Y
Sbjct: 527 EHSGLVTTGAAGG-------------LDRELASL-IVLNISARDHGVHPKVSY 565
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD P N IS + GG NE HF + +K
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSPAANGNISVQILGG---------NEQ--RHFEVQSSK 413
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK-GTPPRETYKA 118
+ P I V LDRE P YNLT+ D G PP +A
Sbjct: 414 V-PNLSL----IKVASALDRERIP-SYNLTVSVSDNYGAPPAAAVQA 454
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F YQA V E+ +G+ V+ + AADAD G N+ I Y ++ +EG
Sbjct: 246 NPPIFGSSHYQAGVPEDAAVGSSVLQVAAADAD-EGTNADIRYRLQ-----------DEG 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P ++DP T I V + LD E A Y+LT++A+D+G P
Sbjct: 294 -------TPFQMDPETGL----ITVREPLDFE-ARRQYSLTVQAMDRGVP 331
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF+ Y TV EN P GT VI L A DAD G N+ I+Y+V+ D F ID
Sbjct: 3190 NSPVFTPDEYFPTVLENAPSGTTVIHLNATDAD-SGTNAVIAYTVQSSDS-DLFVID 3244
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G N+ + YS+ G + G F+
Sbjct: 1311 NTPSFPKSTLFVDVLENMRIGELVSSVTATDSD-SGDNADLHYSISGTNNHGTFS----- 1364
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1365 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1402
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y+ T+ E++P+ + ++A+D D G N +++YS+ G+ F + +G
Sbjct: 992 NPPVFDQLSYEVTLSESEPVNSRFFKVQASDKD-SGANGEVAYSIAEGNAGDAFGVFPDG 1050
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D + + +VV DR + PL + + +
Sbjct: 1051 QL----YIKSELDRELQDRYVLLVVAS--DRAVEPLSATVNVTVI 1089
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 48/109 (44%), Gaps = 22/109 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQAT+ E+ T V+ + A+D D G N I YSV G+ F ID+
Sbjct: 1206 NAPKFLKDFYQATISESAANLTQVLRVSASDVD-EGSNGLIHYSVIKGNEERQFAIDSTS 1264
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGT 110
+ ++ LD E P Y+L ++AVD GT
Sbjct: 1265 G--------------------QVTLIGKLDYEATP-AYSLVIQAVDSGT 1292
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP F Y V +N +GT +I + A D G+NS++ Y + G+ LG F ++N
Sbjct: 2979 NAPQFLKLKYFTPVTKNVKVGTKLIKVAAVDDKDFGLNSEVEYFISNGNHLGKFKLENH 3037
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 51/117 (43%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G VI A D+D G++ + SY + G+ G F +D
Sbjct: 131 NAPVFPDPSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIIRGNEAGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE P Y L + DKG P R Y
Sbjct: 189 -----------ITLNPSGEGAFLHLVSKGGLDREATP-QYQLLVEVEDKGEPKRRGY 233
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A ++EN+P G+ + T+ A D D G N + YS+ GD
Sbjct: 685 NSPVFYPVQYFAHIQENEPGGSYITTVSATDPD-LGPNGTVKYSISAGD 732
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVFS Y V EN +G V ++ A+ D +NS ISY + GD G F I+
Sbjct: 789 NPPVFSQAAYSFVVFENVALGYHVGSVSASTMD---LNSNISYLITTGDQKGMFAIN 842
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS AT+ E+ IG +V T+ A D D MN I Y + G+ G F I++
Sbjct: 3085 HTPEFSQSHMSATIPESHSIGAIVRTVSARDRD-AAMNGLIRYGISSGNEGGVFAINSST 3143
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ +++ K LD E + +T+ A D G R Y
Sbjct: 3144 GV--------------------LILAKALDYEQCQ-KHEMTISATDGGWVARTGY 3177
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 21/98 (21%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKI 73
++ EN PIGT VI++ A D D +N K+SY++ I NHF I K
Sbjct: 1428 SIVENVPIGTSVISVTAHDPD-ADINGKLSYAI----------IQQMPRGNHFGIDEVK- 1475
Query: 74 DPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
GT I +DRE A L + LT++A D+ P
Sbjct: 1476 --GT------IYTTAEIDREFANL-FELTVKANDQAVP 1504
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF + TV+EN G+ ++ L A DAD G N+ ++Y++ G F ID E
Sbjct: 1736 NPPVFPTDMLDLTVEENIGDGSKIMQLTALDAD-EGANALVTYAIISG-ADDSFRIDPES 1793
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
++ TK ++ +Y+++V + + + N+T+ V+ TP
Sbjct: 1794 G----DLIATKRLDRERRSKYSLLVRADDGLQSSDMRINITISDVNDHTP 1839
Score = 35.0 bits (79), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 48/111 (43%), Gaps = 28/111 (25%)
Query: 4 PVFSDFVYQATVKENQPIGTL---VITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
PVF Y V EN +GTL ++ + A D D G NS+ISY + GG+ FT+
Sbjct: 2257 PVFELSPYSVNVPEN--LGTLPSTILQVLARD-DDQGSNSQISYVLFGGNEDNAFTLSAS 2313
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
G L V + LDRE + LT+ A D G+P
Sbjct: 2314 GELR---------------------VTQSLDRETKE-HFVLTVTATDSGSP 2342
>gi|440904071|gb|ELR54637.1| Protocadherin Fat 2 [Bos grunniens mutus]
Length = 4347
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ FV+Q V+EN P GT V+ + A D D G++ ++ Y +RGG GL F+I+ +
Sbjct: 1023 LHPPRFASFVHQGQVQENSPSGTSVMVVAAHD-DDTGLDGELQYFLRGGTGLAAFSINQD 1081
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I L LDRE A Y LT+ AVD+G+ P
Sbjct: 1082 TGM--------------------IQTLAPLDREFASC-YWLTVLAVDRGSIP 1112
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 53/108 (49%), Gaps = 22/108 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F +Y V EN +G +V+T+ A D D P +NS I+YS+ GG+ LG
Sbjct: 3317 PRFPQHLYSTRVLENAIVGDVVLTVSATDEDGP-VNSAITYSLIGGNQLG---------- 3365
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
HF I P KK E + V K LD E Y+L LRA D G P
Sbjct: 3366 -HFAIHP-------KKGE--LQVAKALDWEQTS-SYSLKLRATDSGQP 3402
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 49/113 (43%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+APVF+ Y T EN P GT V+T+ A D D G N I+YS+
Sbjct: 450 HAPVFNRSSYDGTFDENIPPGTSVLTVTATDQD-HGENGYITYSI--------------- 493
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
H VP IDP I K +D E+ Y +RA D G+P R+
Sbjct: 494 --THPNAVPFSIDPYLGI----ISTSKPMDYELMNRIYTFRVRASDWGSPFRQ 540
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 39/92 (42%), Gaps = 18/92 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y+ +V EN G V TLK DAD N +++ + GD LG F I G
Sbjct: 2900 NAPRFASEDYRGSVVENSEPGEPVATLKTLDADIAEQNRQVTCYITEGDPLGQFGISQVG 2959
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
E+ I K LDRE
Sbjct: 2960 ------------------DEWRIFSRKTLDRE 2973
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P FS VY ++ E P T VI L A+D D G N +SY + G D +F I+
Sbjct: 2264 NPPTFSQLVYTTSISEGLPAQTPVIQLLASDQD-SGQNRDVSYQIVEDGSDVSKFFQIN- 2321
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G+ + + ++ LD E A +++ +RA+D+G PP
Sbjct: 2322 ----------------GSTGE---MSTVQELDYE-AQQHFHVKVRAMDRGDPP 2354
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P S V+ TV+E+ P+ T V+ L A D D K+++++ G+ +G+F +
Sbjct: 1129 NPPQMSRPVFYPTVREDAPLHTSVLQLDAWDLDSSS-KGKLTFNITSGNHMGFFVLH--- 1184
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLD 91
PL ++D + K+ +I+ + +LD
Sbjct: 1185 PLTGLLATARQLD--RENKDEHILEVTVLD 1212
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLG---YFTID 58
N P+F Y+A + EN P+GT VI + A D D G + ++SY + G G F ID
Sbjct: 2791 NRPIFEADPYKAVLTENMPVGTSVIQVTANDQD-TGDDGQVSYRLPVGPGSNIHELFAID 2849
Query: 59 NE 60
+E
Sbjct: 2850 SE 2851
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 18/109 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNE 60
N P F Y +V+EN PIG+ V+ L +D D P S+ + +G DG
Sbjct: 3420 NPPRFFQLNYSTSVQENAPIGSKVLQLILSDPDSPENGPPFSFRITKGNDGFA------- 3472
Query: 61 GPLNHFRIVP-----TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLR 104
FR+ P T + +E+ + +++ D I PL + +++
Sbjct: 3473 -----FRVTPDGWLVTTAGLSKRVQEWYKLQIEVSDSGIPPLSSSTSVK 3516
>gi|47212432|emb|CAF94182.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3085
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/113 (37%), Positives = 55/113 (48%), Gaps = 22/113 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+NAP FS F +ATVKEN IGT ++ + A D D G + +I YS+R G GLG F I+ E
Sbjct: 1024 LNAPYFSHFALKATVKENARIGTTLLQVAAQD-DDVGRDGEIQYSIRDGSGLGRFAINEE 1082
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I LDRE Y LT+ A D+G P+
Sbjct: 1083 TGV--------------------IYTTDTLDRETKD-SYWLTVYATDRGVVPQ 1114
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 13/101 (12%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG- 61
APVF VY+A VKEN +GT V+ +KA D+D PG+ +++YS G F+ID G
Sbjct: 2538 APVFEQNVYEAQVKENSVVGTRVVQVKATDSD-PGVFGRVTYSFVNDVGRERFSIDANGQ 2596
Query: 62 -----------PLNHFRIVPTKIDPGTKKKEYNIVVLKLLD 91
P N + +V Y V + L+D
Sbjct: 2597 ITTAEKLDREDPSNQYVVVSVAAQDAGGHVSYATVQVSLVD 2637
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 24/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P+F+ Y+ +V E+ +G+ V+ + A D D G N+ + YS+ G N+G
Sbjct: 1608 HVPIFTRSTYEGSVCESSAVGSAVVQVSALDKD-KGENADVQYSIESG---------NKG 1657
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVDKGTPPRET 115
N F I P I+ + D ++ +G Y LT+RA DKG+PP T
Sbjct: 1658 --NTFHIEPI----------LGIITIS-HDLNLSSIGHYVLTVRATDKGSPPLST 1699
Score = 42.7 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 48/112 (42%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ V E+ P+GT V+T+ A D D G N I+YS+ L +
Sbjct: 454 NTPTFHQSSYEILVNESVPVGTSVLTVSAQDGD-DGENGYITYSISSLGALPF------- 505
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+N F V T +P LD + + + +RA D G+P R
Sbjct: 506 QINQFSGVITTTEP--------------LDFDFSSDSFVFIVRASDWGSPYR 543
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD-PPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP+ S+ +Y ++V+EN P G V+ ++A D D P K+S+ + G+ F I++
Sbjct: 1130 NAPLTSEAMYDSSVQENSPEGVSVVQIQAQDPDETPLTAEKLSFHIVSGNPQNLFAINSH 1189
Query: 61 GPL 63
L
Sbjct: 1190 TGL 1192
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVF+ +Y+A V E P G V ++A+DAD K+ YS+ G+ F +D
Sbjct: 2435 NPPVFNQLLYEAYVDELAPRGHFVTCVQASDADSSDY-EKLEYSILSGNEKLVFMLD 2490
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 23/108 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF VY+ E+ P+GT++ L+ D D G ++ YS+ D G+F +D
Sbjct: 920 PVFIPSVYKTRALEDLPVGTVLAWLETQDPD-LGPGGQVQYSL-ANDYNGWFEVD----- 972
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ I ++K LD E YNL+++A D+G P
Sbjct: 973 ---------------RTSGAIRLMKELDYETQQF-YNLSVKAKDRGKP 1004
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 22/117 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKI-SYSVRGGDGLGYFTIDNE 60
+APV S N PI V+T++ D PG+N ++ S + GGD F ++
Sbjct: 251 HAPVISVVNSSPWSHANSPI-YAVVTVEDPD---PGLNGEVDSVVILGGDLSEKFFLER- 305
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+++ E+ I + L+ E P G NLTL+A D+GTP + + K
Sbjct: 306 ----------------SEENEFFIRATESLNWETHPRGCNLTLQAADRGTPQKVSVK 346
Score = 35.4 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F + Y +V+E P G +V L D D N +SY + GG+ G F +
Sbjct: 2976 PRFLEQRYFGSVQEGSPPGEVVAALDTRDNDGSATNRHVSYHITGGNYRGSFAL------ 3029
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V LDRE L Y + + A D
Sbjct: 3030 ------------GLVQGEWKLYVKFRLDREERSL-YRINVSASD 3060
Score = 35.0 bits (79), Expect = 9.2, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 47/114 (41%), Gaps = 23/114 (20%)
Query: 4 PVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
P FS F V+E+ +G+ V + A D D G N +I YS+ G+ FT+D +
Sbjct: 708 PQFSKAFPTDIAVREDLGVGSSVFQVSAYDGDT-GFNGQILYSISDGNPDDCFTMDTDTG 766
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
L I VL LDRE Y L L D G PP+ +
Sbjct: 767 L--------------------ISVLLPLDREKKD-HYLLNLTIYDLGRPPKSAW 799
>gi|16876883|gb|AAH16722.1| FAT3 protein, partial [Homo sapiens]
Length = 230
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F+ID+E
Sbjct: 14 LHTPYFPDFAVVGSVKENSRIGTSVLQVTARDED-SGRDGEIQYSIRDGSGLGRFSIDDE 72
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I +LDRE Y LT+ A D+G P
Sbjct: 73 SGV--------------------ITAADILDRETMG-SYWLTVYATDRGVVP 103
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP+ S+ +Y V EN P VI ++A D D N K++Y + G+ +F I+
Sbjct: 120 NAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSS-NEKLTYRITSGNPQNFFAIN 175
>gi|410956059|ref|XP_003984662.1| PREDICTED: protocadherin Fat 1 [Felis catus]
Length = 4586
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 57/112 (50%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVFS Y A + E+ + VIT+ A DAD P NS I YS+ G N+G
Sbjct: 3329 NSPVFSQDTYTAVISEDAVLEQSVITVMADDADGPS-NSHIRYSITDG---------NQG 3378
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P IDP + + V +LLDRE GY LT++A D G+PPR
Sbjct: 3379 S-------PFTIDPARGE----VKVTRLLDRETIS-GYTLTVQASDNGSPPR 3418
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 58/116 (50%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVFS FV + VKE+ PIG+ V+T+ A D D G + +I YS+R G G+G F ID E
Sbjct: 1027 LHPPVFSSFVEKGVVKEDVPIGSSVMTVSAHDED-TGRDGEIRYSIRDGSGVGVFKIDEE 1085
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE + Y LT+ A D+G P ++
Sbjct: 1086 TGV--------------------IETSDGLDRE-STSHYWLTVYAADRGVVPLSSF 1120
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N +++Y + GGD LG F I+N
Sbjct: 2914 PRFTAEIYKGTVSEDDPPGGVIAILSTTDADSEEINRQVTYYITGGDPLGQFAIEN---- 2969
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE Y LT+ A D
Sbjct: 2970 --------------IQNEWKVFVKKPLDREKRD-NYLLTITATD 2998
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 59/119 (49%), Gaps = 25/119 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP FS + TV EN GTL+ ++A DAD G+N KISYS V DG +
Sbjct: 3119 NAPEFSADPHAITVFENTEPGTLLTRVQATDAD-AGLNRKISYSLVNSADG--------Q 3169
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+N F + + + K LDRE+ + Y LTL+AVD+G P R T T
Sbjct: 3170 FSINEFSGI--------------LQLEKPLDREVRAV-YTLTLKAVDQGLPRRLTATGT 3213
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 47/112 (41%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A+ EN PIGT V+++ A D D G N ++YS+
Sbjct: 457 NPPEFTQTAYKASFDENVPIGTTVLSVSAVDPD-EGENGYVTYSIAN------------- 502
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
LNH V E LD E+ P Y L +RA D G P R
Sbjct: 503 -LNHVPFVINHFTGAVSTSEN-------LDYELMPRVYTLRIRASDWGLPYR 546
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ +G++V+ + A D D G N+++ YS+ G+ FTID
Sbjct: 1556 HAPWFTSSSYEGRVYESAAVGSVVLQVTALDKD-KGKNAEVLYSIESGNIGNSFTID--- 1611
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+ ++ T K LDR + + Y+L ++A DKG PP
Sbjct: 1612 PI--LGLIKTA---------------KELDRN-SQVEYDLMVKATDKGNPP 1644
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKEN P+G +I + A D D G N K+ Y++ GG+ F ID E +
Sbjct: 724 VKENHPVGASIIFMNATDLD-TGFNGKLVYAISGGNEDSCFVIDMETGM----------- 771
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ +L LDRE Y L + A D G P + ++
Sbjct: 772 ---------LKILSPLDRETTD-KYTLNITASDLGIPQKAAWR 804
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 17/89 (19%)
Query: 25 VITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNI 84
++T+ D P G + S S+ GD L FR V + PG+K EY +
Sbjct: 273 IVTVDDCDQGPNGEIA--SLSIVAGD-----------LLQQFRTV--RSSPGSK--EYKV 315
Query: 85 VVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ +D + P GYNLTL+A DKGTPP+
Sbjct: 316 KAVGGIDWDSHPFGYNLTLQAKDKGTPPQ 344
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ +GT V+ + AA D N++I+Y++ G+ G F+ID+
Sbjct: 3224 NPPVFEYREYGATVSEDILLGTEVLQVYAASRDIEA-NAEITYAIISGNEHGKFSIDS-- 3280
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I +++ LD E + Y LT+ A D GTP
Sbjct: 3281 ------------------KTGAIFIIENLDYE-SSHEYYLTVEATDGGTP 3311
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 10/114 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y ++EN+P+G V+ L D D ++V G+ G F ++ +G
Sbjct: 3434 NAPVFSKGNYSVIIQENKPVGFSVLQLVVTDRDSSHNGPPFFFTVVSGNDDGVFEVNQQG 3493
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR---EIAPLGYNLTLRAVDKGTPP 112
L + K+ K++ ++ +K+ D +++ L Y + +R +++ P
Sbjct: 3494 VLLTSAAIKRKV------KDHYLLHVKVADNGKPQLSSLTY-IDIRVIEESVYP 3540
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 23/101 (22%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
Y+ V+E+ P GT+++ L+A D D G +S++ YS+ G G+F +D
Sbjct: 930 YRVKVREDLPEGTIIMWLEAHDPD-LGQSSQVRYSLL-DHGEGHFDVD------------ 975
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT+RA DKG P
Sbjct: 976 --------KLSGAVRIVQHLDFEKKQV-YNLTVRAKDKGKP 1007
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 21/114 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S+ VY + EN P V+ ++A DAD N K++Y + G+ G+F+I +
Sbjct: 1133 NAPQTSEPVYYPEIIENSPKDVSVVQIEAFDADSSS-NDKLTYKITSGNPQGFFSIHPK- 1190
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
T + T +K LDRE + L + D G+PP+ T
Sbjct: 1191 ---------TGLITTTSRK---------LDREQQD-EHILEVTVTDNGSPPKST 1225
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P+F +Y+A + E+ G V +KA DAD ++ ++ YS+ G+ F ID E
Sbjct: 2384 NPPLFDQQIYEAKISEHAMHGHFVTCVKAYDADSSDID-RLDYSILSGNDHKNFVIDGE 2441
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 20/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y AT+ E IGT V+ ++A D+D N ISY + G +
Sbjct: 2277 NPPVFGQQSYAATLSEAAVIGTSVVQVRATDSDSEP-NRGISYHMFGNHSKSH------- 2328
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+HF ID T I +++ LD E + + +RA+D G PP
Sbjct: 2329 --DHFH-----IDSSTGL----ISLVRTLDYEQFQ-QHKIFVRALDGGMPP 2367
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y+ + + P GT VI + A+DAD G N+ ++Y++ D+E
Sbjct: 2590 NAPQFRATKYEVDIGSSAPKGTSVIKVLASDAD-EGSNADVTYAIEA---------DSES 2639
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I K+ KE L L+ E + +RAVD G+P RE+
Sbjct: 2640 VKENLEI--NKLSGIITTKE----SLIGLENEF----FTFFVRAVDSGSPSRES 2683
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+++PVF Y+ + EN P+ TLVI +KA D D G+ I+Y + F ++
Sbjct: 2485 LHSPVFLQSEYEVELAENAPLHTLVIEVKATDGD-SGIYGHITYHIVNDFAKDRFYTNDR 2543
Query: 61 GPL 63
G +
Sbjct: 2544 GQI 2546
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + Y A VK + +G ++ + A D D G N ++ Y ++ + +F I + G
Sbjct: 2075 NAPVFVNLPYYAVVKVDTVVGHVIRHVTAVDRD-SGRNGEVHYYLK--EHHEHFQIGSSG 2131
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVL 87
++ + + +P T KEY + V+
Sbjct: 2132 EIS----LKKQFEPDTLNKEYLVTVV 2153
>gi|332207901|ref|XP_003253033.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 3-like [Nomascus
leucogenys]
Length = 4557
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F+ID+E
Sbjct: 1038 LHTPYFPDFAVVGSVKENSRIGTSVLQVTARDED-SGRDGEIQYSIRDGSGLGRFSIDDE 1096
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I +LDRE Y LT+ A D+G P
Sbjct: 1097 SGV--------------------ITAADILDRETTG-SYWLTVYATDRGVVP 1127
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ Y+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 2920 NAPVFAQEAYRGNVKESDPPGEVVAVLSTWDRDTSDVNRQVSYHITGGNPRGRFAL---- 2975
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 2976 --------------GLVQSEWKVYVKRPLDREEQDI-YFLNITATD 3006
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS VY A + E+ +G VI L A D D N +I +S+ GD FT+D
Sbjct: 3337 NPPKFSQDVYSAVISEDALVGDSVILLIAEDVDSQP-NGQIHFSIVNGDRDNEFTVDPVL 3395
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L + V K LDRE GY+L ++AVD G P
Sbjct: 3396 GL--------------------VKVKKKLDRERVS-GYSLLVQAVDSGIP 3424
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F +Y A V E+ P+GT V+T+ A+D D G N I+YS+ + L +
Sbjct: 468 HTPEFQQPLYDAYVNESVPVGTSVLTVSASDKD-KGENGYITYSIASLNLLPF------- 519
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 520 AINQFTGV--------------ISTTEELDFESSPEIYRFVVRASDWGSPYRH 558
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI ++A D D PG +ISY++ F ID+ G
Sbjct: 2493 SPAFSQSTYVAEVRENVAAGTKVIHVRATDGD-PGTYGQISYAIINDFAKDRFLIDSNGQ 2551
Query: 63 L 63
+
Sbjct: 2552 V 2552
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D++
Sbjct: 2390 NSPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYSILSGNDRTSFLMDSKS 2448
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D S+S+ G+ F +D G
Sbjct: 3442 NSPVFTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPPFSFSILSGNEEEEFVLDPHG 3501
Query: 62 PL 63
L
Sbjct: 3502 IL 3503
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ GT V+ + A D G N++I+Y +R G+ G F
Sbjct: 3232 NPPVFERRDYLVTVPEDTSPGTQVLAVFATSKDI-GTNAEITYLIRSGNEQGKF------ 3284
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
KI+P T +I V ++LD E+ Y L + A D GTP
Sbjct: 3285 ----------KINPKTG----DISVSEVLDYELCKRFY-LVVEAKDGGTP 3319
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 44/108 (40%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y A + E+ P +++ + A DAD G N I YS+ G +F G
Sbjct: 3025 NSPVCDQVAYTALLPEDIPSNEIILKVSAKDAD-IGSNGDIRYSLYGSGNSEFFLDSESG 3083
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
L L LLDRE P+ Y+L +A D G
Sbjct: 3084 ELK---------------------TLALLDRERIPM-YSLMAKATDGG 3109
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 47/106 (44%), Gaps = 17/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ S+ +Y V EN P VI ++A D D N K++Y + G+ +F I
Sbjct: 1144 NAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSS-NEKLTYRITSGNPQNFFAINIKT 1202
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNI-VVLKLLDR 92
D E HF V T D G K+ I VV+ +LD
Sbjct: 1203 GLITTTSRKLDREQQAEHFLEV-TVTDGGPSPKQSTIWVVVHVLDE 1247
Score = 38.5 bits (88), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 37/78 (47%), Gaps = 16/78 (20%)
Query: 37 GMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIA 95
G N +I S S+ GD PL+ F + G EY I K +D E
Sbjct: 293 GANGEIESVSIVSGD-----------PLDQFFLAK----DGKWLNEYKIKERKQIDWERF 337
Query: 96 PLGYNLTLRAVDKGTPPR 113
P GYNLTL+A DKG+P +
Sbjct: 338 PYGYNLTLQAKDKGSPQK 355
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 25/120 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVF Y ATV+ + GTL+ + A D D G N +++Y ++ D G+F I+ N
Sbjct: 2080 NSPVFVGLPYYATVQVDAEPGTLIYQVTAIDKD-KGPNGEVTYVLQ--DDYGHFEINPNS 2136
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
G N+++ + + +++ + Y +T+ A D G P T P
Sbjct: 2137 G---------------------NVILKEAFNSDLSNIEYGVTILAKDGGKPSLSTSVELP 2175
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F ID
Sbjct: 933 SPAFIPSSYSVKVLEDLPVGTVIAWLETHDPD-LGLGGQVRYSLV-NDYNGRFEID---- 986
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 987 ----------------KASGAIRLSKELDYEKQQF-YNLTVRAKDKGRP 1018
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 24/110 (21%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFR 67
F VKE+ P+ ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 729 FPSDVAVKEDLPVDANILKIKAYDAD-SGFNGKVLFTISDGNTDSCFNIDMETGQLK--- 784
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 785 ------------------VLMPMDREHTDL-YLLNITIYDLGNPQKSSWR 815
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---------RGGDGL 52
N+PVF Y + E+ IGT +I ++A D D G N +++YSV G+
Sbjct: 827 NSPVFIQDSYSVNILESSGIGTEIIQVEARDKD-LGSNGEVTYSVLTDTQQFAINSSTGI 885
Query: 53 GYFT--IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLL 90
Y +D E N+ + + + ++ +++V LK+
Sbjct: 886 VYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVF 925
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG----LGYFTI 57
N PVF Y + E P+GT + ++A D D G N +++YS+ + F I
Sbjct: 2810 NKPVFETSSYDTIIMEGMPVGTKLTQVRAIDMD-WGANGQVTYSLHSDSQPEKVMEAFNI 2868
Query: 58 D-NEGPLNHFRIVPTKIDP 75
D N G ++ + + + DP
Sbjct: 2869 DSNTGWISTLKDLDHETDP 2887
Score = 35.0 bits (79), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++P F++ +Y+A+V E+ +G+ V+ + A D D G N+++ Y++ G+ F I+
Sbjct: 1562 HSPYFTNPLYEASVFESAALGSAVLQVTALDKD-KGENAELIYTIEAGNTGNTFKIE 1617
>gi|47085727|ref|NP_998132.1| protocadherin Fat 1 precursor [Danio rerio]
gi|27463074|gb|AAO15696.1|AF469608_1 protocadherin [Danio rerio]
Length = 4610
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 57/113 (50%), Gaps = 22/113 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+F FV + +KE+ PIGT V+ + A D D G + +I YS+R G GLG FTID
Sbjct: 1029 PLFPSFVDKGFIKEDVPIGTSVMKITAQDEDK-GRDGEIRYSIRDGSGLGIFTIDE---- 1083
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
D G + + +LLD E P Y LT+ A D+G P ++
Sbjct: 1084 ----------DTGVIRTQ------ELLDHETVP-HYWLTVYATDRGVVPLSSF 1119
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 8/100 (8%)
Query: 17 ENQPIGTLVITLKAA--DADPPGMNSKISYSVRGGDG-LGYFTIDNEGPLNHFRIVPTKI 73
E+ P+ T V TL A+ D DP + + +G +G + ++ PL FR + T
Sbjct: 250 EHTPVITAV-TLAASETDKDPTYAVVTVEDNDQGANGEIASLSVVAGDPLQQFRAMRTS- 307
Query: 74 DPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
PG+K EY I +K +D + P GYNLTL+A DKGTPP+
Sbjct: 308 -PGSK--EYQIKAVKQVDWDSQPFGYNLTLQAKDKGTPPQ 344
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ +Y A + E+ +G V+T+ A DAD P N ++ +S+ G+ FTID
Sbjct: 3329 NSPVFNQDIYSAVISEDAELGKTVLTVMADDADGPSSN-QVRFSIIDGNQGSPFTID--- 3384
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
P + + + V +LLDRE GY LT+ A D G P R +
Sbjct: 3385 --------PVRGE---------VKVARLLDREKTS-GYTLTVLASDNGGPARSS 3420
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L D D N +ISY + GGD LG F I++
Sbjct: 2914 PKFTAEIYKGTVSEDDPPGGVIAILSTTDLDTEENNKQISYFITGGDPLGQFAIEH---- 2969
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE Y L + A D
Sbjct: 2970 --------------TQGEWKVSVRKPLDRE-EKDNYLLNITATD 2998
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ P+GT V+ + AA D ++I+Y++ G+ G F
Sbjct: 3224 NPPVFERREYTATVAEDIPVGTQVLRVHAASRDTEA-GTEITYAIINGNERGAF------ 3276
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
++DP T + V++ LD E A Y LT+ A D GTP
Sbjct: 3277 ----------RVDPQTG----GVFVIEPLDYETAHEFY-LTVEATDGGTP 3311
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 14/102 (13%)
Query: 3 APVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
AP F+D F VKE+ P+G ++ L A+D+D G N K+ Y + GGD F ID +
Sbjct: 711 APQFADTFPSVIEVKEDLPVGARIVHLSASDSD-SGFNGKLVYVISGGDAESRFIIDMDS 769
Query: 61 ------GPL-----NHFRIVPTKIDPGTKKKEYNIVVLKLLD 91
PL +H+ + T D +K ++ +K+LD
Sbjct: 770 GWLKVFAPLDRETTDHYTLNITVYDLVPQKSSSRLLDVKILD 811
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS Y V E+ G+ V+ + A D D G N++I YS+ G+ F ID
Sbjct: 1555 NAPWFSGAPYVGRVFESAATGSAVLQVSALDKD-KGQNAEIIYSIESGNVANSFAID--- 1610
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+ V ++D K + + LT++A DKGTPP
Sbjct: 1611 PVLGTITVAKELDRNNKNR------------------FELTVKASDKGTPP 1643
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+A++ EN P GT V+T+KA D D G N ++YS+ + +
Sbjct: 457 NGPEFKQTSYKASLDENMPTGTSVLTVKATDLD-SGENGYVTYSIANVNSQPFV------ 509
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+++F V I + LD E+ P Y L +RA G+P R
Sbjct: 510 -IDYFSGV--------------ISSSETLDYELMPRIYTLKVRASGWGSPYR 546
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 49/112 (43%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N PVF +Y A++ E IGT V+ + A DAD G N + Y + YF+ID
Sbjct: 2276 NPPVFHTKLYNASLSEASVIGTSVLEVSATDAD-TGNNKVLFYQIVEDKDKSFDYFSIDR 2334
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
D GT I ++LD E P + L +RAVD G P
Sbjct: 2335 --------------DTGT------IWTTRMLDHEEKP-SHRLLIRAVDGGVP 2365
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N PVFS VY+ATV E P G V ++A+DAD + K+ +S+ G+ F +D N
Sbjct: 2383 NTPVFSQNVYEATVSELAPRGHFVTQVQASDADISD-SGKLEFSILSGNEGQNFAMDPNT 2441
Query: 61 GPL---NH 65
G L NH
Sbjct: 2442 GALVISNH 2449
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 46/111 (41%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y ++ENQPIG V+ L +D D ++S+ G NEG
Sbjct: 3434 NPPIFSQANYSIIIQENQPIGASVLQLTVSDRDASHNGPPFTFSIIRG---------NEG 3484
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ FRI P + +V L R+ Y L + D G PP
Sbjct: 3485 --DFFRITPQGV----------LVSAATLSRQTQEF-YLLQAQVTDSGRPP 3522
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N+P+ Y +V E+ P G L++ + A DAD N++ISY + G G +F+ID+E
Sbjct: 3017 NSPICEKSFYMESVPEDSPAGRLILQVSATDADIRS-NAQISYELLGP-GSEHFSIDSE 3073
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 26/112 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV----RGGDGLGYFTI 57
N P+F Y+A V EN P GT VI +KA D D G N + Y++ D + F I
Sbjct: 2802 NRPLFESNPYEAFVVENLPGGTCVIQVKATDLD-SGTNGHVVYNLDPNQETRDIVELFAI 2860
Query: 58 DNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
++E I LK LDRE Y +++ A D+G
Sbjct: 2861 NSESGW--------------------ITTLKELDRETRN-KYTVSVLATDRG 2891
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 25/111 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
N P F+ Y TV EN I T V L A+D D G N++I YS + DG+ F+I+ E
Sbjct: 3119 NPPQFTTDPYTFTVFENTEINTPVARLYASDLD-TGANAEIMYSLLDSADGV--FSIEEE 3175
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ ++D + LDRE+ L Y L +A D+G+P
Sbjct: 3176 TGV-------VRLD-------------RPLDRELQSL-YTLRAQATDRGSP 3205
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 25/102 (24%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNEGPLNHFRIV 69
Y V+E+ PIGT+++ L+A D D G +S++ YS + GD G F +D
Sbjct: 929 YHVRVREDLPIGTVIMWLEAHDPD-VGPSSQVRYSLIDSGD--GKFEVD----------- 974
Query: 70 PTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + Y+LT +A DKG P
Sbjct: 975 ---------KLSGAVRIVQNLDYEKKQV-YSLTAKAKDKGKP 1006
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S+ VY +V E+ P +I ++A D D + K+SY + G+ G+F+I+ +
Sbjct: 1132 NAPQTSEPVYYPSVMESSPKDVSIIQIEAFDPDTKS-SEKLSYKITSGNPQGFFSINQKT 1190
Query: 62 PL 63
L
Sbjct: 1191 GL 1192
>gi|402894933|ref|XP_003910594.1| PREDICTED: protocadherin Fat 3 [Papio anubis]
Length = 4573
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F+ID+E
Sbjct: 1038 LHTPYFPDFAVVGSVKENSRIGTSVLQVTARDED-SGRDGEIQYSIRDGSGLGRFSIDDE 1096
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I +LDRE Y LT+ A D+G P
Sbjct: 1097 SGV--------------------ITAADILDRETTG-SYWLTVYATDRGVVP 1127
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 2904 NAPVFAQEVYRGNVKESDPPGEVVAVLSTWDRDTSDINRQVSYHITGGNPRGRFAL---- 2959
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 2960 --------------GLVQSEWKVYVKRPLDREEQDI-YFLNITATD 2990
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 51/114 (44%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS VY A + E+ +G VI L A D D N +I +S+ GD FT+D
Sbjct: 3321 NPPKFSQDVYSAVISEDALVGDSVILLIAEDVDSQP-NGQIHFSIVNGDRDNEFTVDPVL 3379
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
L + V K LDRE GY+L ++AVD G PP +
Sbjct: 3380 GL--------------------VKVKKKLDRERVS-GYSLLVQAVDSGIPPMSS 3412
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F +Y A V E+ P+GT V+T+ A+D D G N I+YS+ + L +
Sbjct: 468 HTPEFQQPLYDANVNESVPVGTSVLTVSASDKD-KGENGYITYSIASLNLLPF------- 519
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 520 AINQFTGV--------------ISTTEELDFESSPEIYRFIVRASDWGSPYRH 558
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI ++A D D PG +ISY++ F ID+ G
Sbjct: 2477 SPAFSQSTYVAEVRENAAAGTKVIHVRATDGD-PGTYGQISYAIINDFAKDRFLIDSNGQ 2535
Query: 63 L 63
+
Sbjct: 2536 V 2536
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D S+S+ G+ F +D+ G
Sbjct: 3426 NSPVFTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPPFSFSILSGNEEEEFVLDSHG 3485
Query: 62 PL 63
L
Sbjct: 3486 IL 3487
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 16/78 (20%)
Query: 37 GMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIA 95
G N +I S S+ GD L F + EG EY I K +D E
Sbjct: 293 GANGEIESVSIVAGDPLDQFFLAKEGKW---------------LNEYKIKERKQIDWESF 337
Query: 96 PLGYNLTLRAVDKGTPPR 113
P GYNLTL+A DKG+P +
Sbjct: 338 PYGYNLTLQAKDKGSPQK 355
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ GT V+ + A D G N++I+Y +R G+ G F
Sbjct: 3216 NPPVFERRDYLVTVPEDTSAGTQVLAVFATSKDI-GTNAEITYLIRSGNEQGKF------ 3268
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
KI+P T I V ++LD E+ Y L + A D GTP
Sbjct: 3269 ----------KINPKTG----GISVSEVLDYELCKRFY-LVVEAKDGGTP 3303
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+ S+ +Y V EN P VI ++A D D N K++Y + G+ +F I+ +
Sbjct: 1144 NAPLTSEPIYYPVVMENSPKDISVIQIQAEDPDSSS-NEKLTYRITSGNPQNFFAINIKT 1202
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR 92
L K+D + + + VV+++LD
Sbjct: 1203 GL--ITTTSRKLDREQQAEHFLEVVVQVLDE 1231
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D++
Sbjct: 2374 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYSILSGNDRTSFLMDSKS 2432
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 24/110 (21%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFR 67
F VKE+ P+G ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 729 FPSDVAVKEDLPVGANILKIKAYDAD-SGFNGKVLFTISDGNTDSCFNIDMETGQLK--- 784
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 785 ------------------VLMPMDREHTDL-YLLNITIYDLGNPQKSSWR 815
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F ID
Sbjct: 933 SPAFIPSSYSVKVLEDLPVGTVIAWLETHDPD-LGLGGQVRYSLV-NDYNGRFEID---- 986
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 987 ----------------KASGAIRLSKELDYEKQQF-YNLTVRAKDKGRP 1018
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 25/120 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVF Y A V+ + GTL+ + A D D G N +++Y ++ D G+F I+ N
Sbjct: 2064 NSPVFVGLPYYAAVQVDAEPGTLIYQVTAIDKD-KGPNGEVTYVLQ--DDYGHFEINPNS 2120
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
G N+++ + + +++ + Y +T+ A D G P T P
Sbjct: 2121 G---------------------NVILKEAFNSDLSNIEYGVTILAKDGGKPSLSTSVELP 2159
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y A + E+ +++ + A DAD G N I YS+ G +F
Sbjct: 3009 NSPVCEQVAYTALLPEDIASNKIILKVSAKDAD-IGSNGDIRYSLYGSGNSEFF------ 3061
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+DP + + + L LLDRE P+ Y+L +A D G
Sbjct: 3062 -----------LDPESGE----LKTLALLDRERVPV-YSLMAKATDGG 3093
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---------RGGDGL 52
N+PVF Y + E+ IGT +I ++A D D G N +++YSV G+
Sbjct: 827 NSPVFIQDSYSVNILESSGIGTEIIQVEARDKD-LGSNGEVTYSVLTDTQQFAINSSTGI 885
Query: 53 GYFT--IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLL 90
Y +D E N+ + + + ++ +++V LK+
Sbjct: 886 VYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVF 925
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG----LGYFTI 57
N PVF Y + E P+GT + ++A D D G N +++YS+ + F I
Sbjct: 2794 NKPVFETSSYDTIIMEGMPVGTKLTQVRAIDMD-WGANGQVTYSLHSDSQPEKVMEAFNI 2852
Query: 58 D-NEGPLNHFRIVPTKIDP 75
D N G ++ + + + DP
Sbjct: 2853 DSNTGWISTLKDLDHETDP 2871
>gi|297747350|ref|NP_001177099.1| FAT tumor suppressor homolog 1 [Sus scrofa]
Length = 4588
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 57/112 (50%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A + E+ + VIT+ A DAD P NS I YS+ G N+G
Sbjct: 3331 NTPVFSQDTYTAVISEDAVLEQSVITVMADDADGPS-NSHIHYSIIDG---------NQG 3380
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P IDP + + V +LLDRE A GY LT++A D G+PPR
Sbjct: 3381 S-------PFTIDPARGE----VKVTRLLDRE-AVSGYTLTVQASDNGSPPR 3420
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVF FV + VKEN PIG+ V+ + A D D G + +I YS+R G G+G F ID E
Sbjct: 1029 LHPPVFPSFVEKGAVKENVPIGSSVMKVSAHDED-TGRDGEIHYSIRDGSGVGVFKIDEE 1087
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE + Y LT+ A D+G P ++
Sbjct: 1088 TGV--------------------IETSDRLDRE-STSHYWLTIYASDQGVVPLSSF 1122
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N +++Y + GGD LG F ++N
Sbjct: 2916 PRFTAEIYKGTVSEDDPPGGVIAILSTTDADSEEINRQVTYYITGGDPLGQFAVEN---- 2971
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE Y LT+ A D
Sbjct: 2972 --------------IQNEWKVYVKKPLDREKRD-NYLLTITATD 3000
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 58/119 (48%), Gaps = 25/119 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP FS Y TV EN GTL+ ++A DAD G+N KISYS + D G F+I+
Sbjct: 3121 NAPEFSADPYTITVFENTEPGTLLTRVQATDAD-AGLNRKISYSLIDSAD--GQFSINEV 3177
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I + K LDRE+ + Y L+L+AVD G P R T T
Sbjct: 3178 SGI--------------------IQLEKPLDRELQAV-YTLSLKAVDHGLPRRLTATGT 3215
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ IGT V+ + AA D N++I+YS+ G+ G F+ID+
Sbjct: 3226 NPPVFEYREYGATVSEDVLIGTEVLQVYAASRDIEA-NAEITYSIISGNEHGKFSIDS-- 3282
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I +++ LD E + Y LT+ A D GTP
Sbjct: 3283 ------------------KTGAIFIIENLDYE-SSHEYYLTVEATDGGTP 3313
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 22/110 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ Y+A+ EN PIGT V+++ A D D G N ++YS+ +
Sbjct: 461 PEFTQTAYRASFDENVPIGTTVMSVSAVDPD-EGENGYVTYSIAN--------------V 505
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
NH VP ID + + + LD E+ P Y L +RA D G P R
Sbjct: 506 NH---VPFVIDHFSGA----VSTSENLDYELMPRVYTLRIRASDWGLPYR 548
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ IG++V+ + A D D G N+++ YS+ G+ FTID
Sbjct: 1558 HAPWFTSSSYEGRVYESAAIGSVVLQVTALDKD-KGKNAEVLYSIESGNIGNSFTID--- 1613
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+ +I K LDR + Y+L ++A DKG PP
Sbjct: 1614 PILG-----------------SIKTAKELDRS-KQVEYDLMVKATDKGNPP 1646
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 19/90 (21%)
Query: 25 VITLKAADADPPGMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYN 83
++T++ D G N +I S S+ GD L FR V + PG+K EY
Sbjct: 275 IVTVEDCDQ---GANGEIASLSIVAGD-----------LLQQFRTV--RASPGSK--EYK 316
Query: 84 IVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ + +D + P GYNLTL+A DKGTPP+
Sbjct: 317 LKAVGGIDWDSHPFGYNLTLQAKDKGTPPQ 346
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKEN+P+G+ VI + A D D G N K+ Y++ GG+ F ID E +
Sbjct: 726 VKENRPVGSSVIFMNATDLD-TGFNGKLVYAISGGNEDSCFIIDMETGV----------- 773
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ +L LDRE Y+L + D G P + ++
Sbjct: 774 ---------LKILSPLDRETTDR-YSLNITVSDLGLPQKAAWR 806
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 10/114 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS + ++EN+P+G+ V+ L D D +S+ G+ G F ++ +G
Sbjct: 3436 NAPVFSKGNHSVIIQENKPVGSSVLQLVVTDRDSSHNGPPFFFSIVSGNEEGTFEVNQQG 3495
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLT---LRAVDKGTPP 112
L T K K++ ++ +K+ D PL +LT +R +++ P
Sbjct: 3496 AL------LTSAAINRKVKDHYLLHVKVADNGKPPLS-SLTYIDIRVIEESVYP 3542
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 50/111 (45%), Gaps = 20/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y AT+ E IGT V+ ++A D+D N ISY + G +
Sbjct: 2279 NPPVFVQQSYAATLSEATVIGTSVVQVRATDSDSEP-NRGISYHMFGNHSKSH------- 2330
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+HF ID T I +++ LD E + + +RAVD G PP
Sbjct: 2331 --DHFH-----IDSSTGL----ISLVRTLDYEQFQ-QHKIFVRAVDGGMPP 2369
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 20/114 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F ++ + N P GT VI + A+DAD G N+ ++Y++ D+E
Sbjct: 2592 NAPQFRATKFEVNIGSNVPKGTSVIKVLASDAD-EGSNADVTYAIEA---------DSEN 2641
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I ++ KE L L+ E+ + +RAVD G+PP+E+
Sbjct: 2642 VKENLEI--NRLSGIITTKE----SLVGLENEV----FTFFVRAVDNGSPPKES 2685
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++P+F VY+A + E+ G V +KA DAD ++ K+ YS+ G+ F +D
Sbjct: 2386 HSPLFDQPVYEAKISEHAAHGHFVTCVKAYDADSSDID-KLEYSILSGNDHKNFVVD 2441
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + Y A VK + +G ++ + A D D G N ++ Y ++ + +F I + G
Sbjct: 2077 NAPVFVNLPYYAVVKVDTAVGQIIRYVTAIDRD-SGRNGEVHYYLK--EHHEHFQIGSSG 2133
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVL 87
++ + +P T KEY I V+
Sbjct: 2134 EIS----LKKPFEPDTLNKEYLITVV 2155
Score = 35.8 bits (81), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 21/114 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S+ VY + EN P V+ ++A D D + K++Y + G+ G+F+I +
Sbjct: 1135 NAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSS-DDKLTYKITSGNPQGFFSISPK- 1192
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
T + T +K LDRE + L + D G+PP+ T
Sbjct: 1193 ---------TGLITTTSRK---------LDREQQD-EHILEVTVTDNGSPPKST 1227
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 23/101 (22%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
Y+ V+E+ GT+++ L+A + D G +S++ YS+ G G F +D
Sbjct: 932 YRVKVREDLSEGTIIMWLEAYEPDL-GQSSQVRYSLLDA-GEGTFEVD------------ 977
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT+RA DKG P
Sbjct: 978 --------KLSGAVRIVQQLDFEKKQV-YNLTVRAKDKGKP 1009
>gi|441620238|ref|XP_004088652.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Nomascus
leucogenys]
Length = 4585
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 56/112 (50%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A + E+ + VIT+ A DAD P NS I YS+ G+ FTID
Sbjct: 3328 NTPVFSQDTYTAVISEDAVLEQSVITVMADDADGPS-NSHIHYSIIDGNQGSSFTID--- 3383
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P + + + V KLLDRE GY LT++A D G+PPR
Sbjct: 3384 --------PIRGE---------VKVTKLLDRETIS-GYTLTVQASDNGSPPR 3417
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 58/116 (50%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVFS FV + TVKE+ PIG+LV+T+ A D D G + +I YS+R G G+G F I E
Sbjct: 1029 LHPPVFSSFVEKGTVKEDVPIGSLVMTVSAHDED-AGRDGEIRYSIRDGSGVGVFRIGEE 1087
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LD E + Y LT+ A D+G P ++
Sbjct: 1088 TGV--------------------IETSDRLDHE-STSHYWLTVFATDQGVVPLSSF 1122
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N +++Y + GGD LG F ++N
Sbjct: 2913 PRFTAEIYKGTVSEDDPPGGVIAILSTTDADSEEINRQVTYFITGGDPLGQFAVEN---- 2968
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE Y LT+ A D
Sbjct: 2969 --------------IQNEWKVYVKKPLDREKRD-NYLLTITATD 2997
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A EN PIGT V++L A D D G N ++YS+
Sbjct: 459 NPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPD-EGENGYVTYSI--------------A 503
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
LNH VP ID T + + LD E+ P Y L +RA D G P R
Sbjct: 504 NLNH---VPFAIDHFTGA----VSTSENLDYELMPRVYTLRIRASDWGLPYR 548
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 58/119 (48%), Gaps = 25/119 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
+AP FS Y TV EN GTL+ ++A DAD G+N KI YS + D G F+I+
Sbjct: 3118 SAPEFSADPYAITVFENTEPGTLLTRVQATDAD-AGLNRKILYSLIDSAD--GQFSINEL 3174
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I + K LDRE+ + Y L+L+AVD+G P R T T
Sbjct: 3175 SGI--------------------IQLEKPLDRELQAV-YTLSLKAVDQGLPRRLTATGT 3212
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKENQP+G+ VI + + D D G N K+ Y++ GG+ F ID E +
Sbjct: 726 VKENQPVGSSVIFMNSTDLD-TGFNGKLVYAISGGNEDSCFMIDMETGM----------- 773
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ +L LDRE Y L + D G P + ++
Sbjct: 774 ---------LKILSPLDRETTD-KYTLNITVYDLGIPQKAAWR 806
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ +GT V+ + AA D N++I+YS+ G+ G F+ID+
Sbjct: 3223 NPPVFEYREYGATVSEDILVGTEVLQVYAASRDIEA-NAEITYSIISGNEHGKFSIDS-- 3279
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + Y LT+ A D GTP
Sbjct: 3280 ------------------KTGAVFIIENLDYE-SSHEYYLTVEATDGGTP 3310
Score = 43.5 bits (101), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P+F +Y+A + E+ P G V +KA DAD + K+ YS+ G+ +F ID+
Sbjct: 2383 NPPLFEQQIYEARISEHAPHGHFVTCVKAYDADSSDAD-KLQYSILSGNDHKHFVIDS 2439
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
L FR V + PG+K EY + + +D + P GYNLTL+A DKGTPP+
Sbjct: 300 LQQFRTVRSF--PGSK--EYKVKAIGGVDWDSHPFGYNLTLQAKDKGTPPQ 346
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ +G++V+ + A D D G N+++ YS+ G+ F ID
Sbjct: 1555 HAPWFTASSYKGRVYESAAVGSVVLQVTALDKD-KGKNAEVLYSIESGNIGNSFVID--- 1610
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P T K+ LDR + Y+L ++A DKG+PP
Sbjct: 1611 --------PVLGSIKTAKE---------LDRS-NQVEYDLMVKATDKGSPP 1643
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N+PVF Y+A + EN P G+ VI ++A+DAD G NS++ YS+
Sbjct: 2802 NSPVFESSPYEAFIVENLPGGSRVIQIRASDAD-SGTNSQVMYSL 2845
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 20/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y AT+ E IGT V+ ++A D+D N ISY + G +
Sbjct: 2276 NPPVFAQQSYAATLSEASVIGTSVVQVRATDSDSEP-NRGISYHMFGNLSKSH------- 2327
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+HF +D T I +L+ LD E + + +RAVD G PP
Sbjct: 2328 --DHFH-----VDSNTGL----ISLLRTLDYE-QSRQHTIFVRAVDGGMPP 2366
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 56/114 (49%), Gaps = 10/114 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y ++EN+P+G V+ L D D +++ G+ F ++ +G
Sbjct: 3433 NAPVFSRGNYSVIIQENKPVGFSVLQLVVTDEDSSHNGPPFFFTIVTGNDEKAFEVNQQG 3492
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR---EIAPLGYNLTLRAVDKGTPP 112
++ T K+K++ ++ +K+ D +++ L Y + +R +++ P
Sbjct: 3493 ------VLLTSSAIKRKEKDHYLLQVKVADNGKPQLSSLTY-VDIRVIEESIYP 3539
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 23/101 (22%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
Y+ V+E+ P GT+++ L+A D D G + ++ YS+ G G F +D
Sbjct: 932 YRVKVREDLPEGTVIMWLEAHDPD-LGQSGQVRYSLM-DHGEGNFDVD------------ 977
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT+RA DKG P
Sbjct: 978 --------KLSGAVRIVQQLDFEKKQV-YNLTVRAKDKGKP 1009
>gi|297268957|ref|XP_001084587.2| PREDICTED: protocadherin Fat 3 [Macaca mulatta]
Length = 4557
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F+ID+E
Sbjct: 1038 LHTPYFPDFAVVGSVKENSRIGTSVLQVTARDED-SGRDGEIQYSIRDGSGLGRFSIDDE 1096
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I +LDRE Y LT+ A D+G P
Sbjct: 1097 SGV--------------------ITAADILDRETTG-SYWLTVYATDRGVVP 1127
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 2920 NAPVFAQEVYRGNVKESDPPGEVVAVLSTWDRDTSDINRQVSYHITGGNPRGRFAL---- 2975
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 2976 --------------GLVQSEWKVYVKRPLDREEQDI-YFLNITATD 3006
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS VY + E+ +G VI L A D D N +I +S+ GD FT+D
Sbjct: 3337 NPPKFSQDVYSTVISEDALVGDSVILLIAEDVDSQP-NGQIHFSIVNGDRDNEFTVDPVL 3395
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
L + V K LDRE GY+L ++AVD G PP +
Sbjct: 3396 GL--------------------VKVKKKLDRERVS-GYSLLVQAVDSGIPPMSS 3428
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F +Y A V E+ P+GT V+T+ A+D D G N I+YS+ + L +
Sbjct: 468 HTPEFQQPLYDANVNESVPVGTSVLTVSASDKD-KGENGYITYSIASLNLLPF------- 519
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 520 AINQFTGV--------------ISTTEELDFESSPEIYRFIVRASDWGSPYRH 558
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI ++A D D PG +ISY++ F ID+ G
Sbjct: 2493 SPAFSQSTYVAEVRENAAAGTKVIHVRATDGD-PGTYGQISYAIINDFAKDRFLIDSNGQ 2551
Query: 63 L 63
+
Sbjct: 2552 V 2552
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D S+S+ G+ F +D+ G
Sbjct: 3442 NSPVFTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPPFSFSILSGNEEEEFVLDSHG 3501
Query: 62 PL 63
L
Sbjct: 3502 IL 3503
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 16/78 (20%)
Query: 37 GMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIA 95
G N +I S S+ GD L F + EG EY I K +D E
Sbjct: 293 GANGEIESVSIVAGDPLDQFFLAKEGKW---------------LNEYKIKERKQIDWESF 337
Query: 96 PLGYNLTLRAVDKGTPPR 113
P GYNLTL+A DKG+P +
Sbjct: 338 PYGYNLTLQAKDKGSPQK 355
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D++
Sbjct: 2390 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYSILSGNDRTSFLMDSKS 2448
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 17/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ S+ +Y V EN P VI ++A D D N K++Y + G+ +F I
Sbjct: 1144 NAPLTSEPIYYPVVMENSPKDISVIQIQAEDPDSSS-NEKLTYRITSGNPQNFFAINIKT 1202
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNI-VVLKLLDR 92
D E HF V T D G K+ I VV+++LD
Sbjct: 1203 GLITTTSRKLDREQQAEHFLEV-TVTDGGPSPKQSTIWVVVQVLDE 1247
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ GT V+ + A D G N++I+Y +R G+ G F
Sbjct: 3232 NPPVFERRDYLVTVPEDTSPGTQVLAVFATSKDI-GTNAEITYLIRSGNEQGKF------ 3284
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
KI+P T I V ++LD E+ Y L + A D GTP
Sbjct: 3285 ----------KINPKTG----GISVSEVLDYELCKRFY-LVVEAKDGGTP 3319
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y A + E+ P +++ + A DAD G N I YS+ G +F
Sbjct: 3025 NSPVCEQVAYTALLPEDIPSNKIILKVSAKDAD-IGSNGDIRYSLYGSGNSEFF------ 3077
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+DP + + + L LLDRE P+ Y+L +A D G
Sbjct: 3078 -----------LDPESGE----LKTLALLDRERVPV-YSLMAKATDGG 3109
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 24/110 (21%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFR 67
F VKE+ P+G ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 729 FPSDVAVKEDLPVGANILKIKAYDAD-SGFNGKVLFTISDGNTDSCFNIDMETGQLK--- 784
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 785 ------------------VLMPMDREHTDL-YLLNITIYDLGNPQKSSWR 815
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F ID
Sbjct: 933 SPAFIPSSYSVKVLEDLPVGTVIAWLETHDPD-LGLGGQVRYSLV-NDYNGRFEID---- 986
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 987 ----------------KASGAIRLSKELDYEKQQF-YNLTVRAKDKGRP 1018
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 25/120 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVF Y A V+ + GTL+ + A D D G N +++Y ++ D G+F I+ N
Sbjct: 2080 NSPVFVGLPYYAAVQVDAEPGTLIYQVTAIDKD-KGPNGEVTYVLQ--DDYGHFEINPNS 2136
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
G N+++ + + +++ + Y +T+ A D G P T P
Sbjct: 2137 G---------------------NVILKEAFNSDLSNIEYGVTILAKDGGKPSLSTSVELP 2175
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---------RGGDGL 52
N+PVF Y + E+ IGT +I ++A D D G N +++YSV G+
Sbjct: 827 NSPVFIQDSYSVNILESSGIGTEIIQVEARDKD-LGSNGEVTYSVLTDTQQFAINSSTGI 885
Query: 53 GYFT--IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLL 90
Y +D E N+ + + + ++ +++V LK+
Sbjct: 886 VYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVF 925
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG----LGYFTI 57
N PVF Y + E P+GT + ++A D D G N +++YS+ + F I
Sbjct: 2810 NKPVFETSSYDTIIMEGMPVGTKLTQVRAIDMD-WGANGQVTYSLHSDSQPEKVMEAFNI 2868
Query: 58 D-NEGPLNHFRIVPTKIDP 75
D N G ++ + + + DP
Sbjct: 2869 DSNTGWISTLKDLDHETDP 2887
>gi|355752536|gb|EHH56656.1| hypothetical protein EGM_06114 [Macaca fascicularis]
Length = 4589
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F+ID+E
Sbjct: 1038 LHTPYFPDFAVVGSVKENSRIGTSVLQVTARDED-SGRDGEIQYSIRDGSGLGRFSIDDE 1096
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I +LDRE Y LT+ A D+G P
Sbjct: 1097 SGV--------------------ITAADILDRETTG-SYWLTVYATDRGVVP 1127
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 2920 NAPVFAQEVYRGNVKESDPPGEVVAVLSTWDRDTSDINRQVSYHITGGNPRGRFAL---- 2975
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 2976 --------------GLVQSEWKVYVKRPLDREEQDI-YFLNITATD 3006
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS VY + E+ +G VI L A D D N +I +S+ GD FT+D
Sbjct: 3337 NPPKFSQDVYSTVISEDALVGDSVILLIAEDVDSQP-NGQIHFSIVNGDRDNEFTVDPVL 3395
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
L + V K LDRE GY+L ++AVD G PP +
Sbjct: 3396 GL--------------------VKVKKKLDRERVS-GYSLLVQAVDSGIPPMSS 3428
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F +Y A V E+ P+GT V+T+ A+D D G N I+YS+ + L +
Sbjct: 468 HTPEFQQPLYDANVNESVPVGTSVLTVSASDKD-KGENGYITYSIASLNLLPF------- 519
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 520 AINQFTGV--------------ISTTEELDFESSPEIYRFIVRASDWGSPYRH 558
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI ++A D D PG +ISY++ F ID+ G
Sbjct: 2493 SPAFSQSTYVAEVRENAAAGTKVIHVRATDGD-PGTYGQISYAIINDFAKDRFLIDSNGQ 2551
Query: 63 L 63
+
Sbjct: 2552 V 2552
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D S+S+ G+ F +D+ G
Sbjct: 3442 NSPVFTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPPFSFSILSGNEEEEFVLDSHG 3501
Query: 62 PL 63
L
Sbjct: 3502 IL 3503
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 16/78 (20%)
Query: 37 GMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIA 95
G N +I S S+ GD L F + EG EY I K +D E
Sbjct: 293 GANGEIESVSIVAGDPLDQFFLAKEGKW---------------LNEYKIKERKQIDWESF 337
Query: 96 PLGYNLTLRAVDKGTPPR 113
P GYNLTL+A DKG+P +
Sbjct: 338 PYGYNLTLQAKDKGSPQK 355
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D++
Sbjct: 2390 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYSILSGNDRTSFLMDSKS 2448
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 17/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ S+ +Y V EN P VI ++A D D N K++Y + G+ +F I
Sbjct: 1144 NAPLTSEPIYYPVVMENSPKDISVIQIQAEDPDSSS-NEKLTYRITSGNPQNFFAINIKT 1202
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNI-VVLKLLDR 92
D E HF V T D G K+ I VV+++LD
Sbjct: 1203 GLITTTSRKLDREQQAEHFLEV-TVTDGGPSPKQSTIWVVVQVLDE 1247
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ GT V+ + A D G N++I+Y +R G+ G F
Sbjct: 3232 NPPVFERRDYLVTVPEDTSPGTQVLAVFATSKDI-GTNAEITYLIRSGNEQGKF------ 3284
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
KI+P T I V ++LD E+ Y L + A D GTP
Sbjct: 3285 ----------KINPKTG----GISVSEVLDYELCKRFY-LVVEAKDGGTP 3319
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y A + E+ P +++ + A DAD G N I YS+ G +F
Sbjct: 3025 NSPVCEQVAYTALLPEDIPSNKIILKVSAKDAD-IGSNGDIRYSLYGSGNSEFF------ 3077
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+DP + + + L LLDRE P+ Y+L +A D G
Sbjct: 3078 -----------LDPESGE----LKTLALLDRERVPV-YSLMAKATDGG 3109
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 24/110 (21%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFR 67
F VKE+ P+G ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 729 FPSDVAVKEDLPVGANILKIKAYDAD-SGFNGKVLFTISDGNTDSCFNIDMETGQLK--- 784
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 785 ------------------VLMPMDREHTDL-YLLNITIYDLGNPQKSSWR 815
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F ID
Sbjct: 933 SPAFIPSSYSVKVLEDLPVGTVIAWLETHDPD-LGLGGQVRYSLV-NDYNGRFEID---- 986
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 987 ----------------KASGAIRLSKELDYEKQQF-YNLTVRAKDKGRP 1018
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 25/120 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVF Y A V+ + GTL+ + A D D G N +++Y ++ D G+F I+ N
Sbjct: 2080 NSPVFVGLPYYAAVQVDAEPGTLIYQVTAIDKD-KGPNGEVTYVLQ--DDYGHFEINPNS 2136
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
G N+++ + + +++ + Y +T+ A D G P T P
Sbjct: 2137 G---------------------NVILKEAFNSDLSNIEYGVTILAKDGGKPSLSTSVELP 2175
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---------RGGDGL 52
N+PVF Y + E+ IGT +I ++A D D G N +++YSV G+
Sbjct: 827 NSPVFIQDSYSVNILESSGIGTEIIQVEARDKD-LGSNGEVTYSVLTDTQQFAINSSTGI 885
Query: 53 GYFT--IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLL 90
Y +D E N+ + + + ++ +++V LK+
Sbjct: 886 VYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVF 925
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG----LGYFTI 57
N PVF Y + E P+GT + ++A D D G N +++YS+ + F I
Sbjct: 2810 NKPVFETSSYDTIIMEGMPVGTKLTQVRAIDMD-WGANGQVTYSLHSDSQPEKVMEAFNI 2868
Query: 58 D-NEGPLNHFRIVPTKIDP 75
D N G ++ + + + DP
Sbjct: 2869 DSNTGWISTLKDLDHETDP 2887
>gi|332837491|ref|XP_001136982.2| PREDICTED: protocadherin Fat 3 [Pan troglodytes]
Length = 4557
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F+ID+E
Sbjct: 1038 LHTPYFPDFAVVGSVKENSRIGTSVLQVTARDED-SGRDGEIQYSIRDGSGLGRFSIDDE 1096
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I +LDRE Y LT+ A D+G P
Sbjct: 1097 SGV--------------------ITAADILDRETMG-SYWLTVYATDRGVVP 1127
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 2920 NAPVFAQEVYRGNVKESDPPGEVVAVLSTWDRDTSDVNRQVSYHITGGNPRGRFAL---- 2975
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 2976 --------------GLVQSEWKVYVKRPLDREEQDI-YFLNITATD 3006
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS VY A + E+ +G VI L A D D N +I +S+ GD FT+D
Sbjct: 3337 NPPKFSQDVYSAVISEDALVGDSVILLIAEDVDSQP-NGQIHFSIVNGDRDNEFTVDPVL 3395
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L + V K LDRE GY+L ++AVD G P
Sbjct: 3396 GL--------------------VKVKKKLDRERVS-GYSLLVQAVDSGIP 3424
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F +Y A V E+ P+GT V+T+ A+D D G N I+YS+ + L +
Sbjct: 468 HTPEFQQPLYDAYVNESVPVGTSVLTVSASDKD-KGENGYITYSIASLNLLPFV------ 520
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 521 -INQFTGV--------------ISTTEELDFESSPEIYRFIVRASDWGSPYRH 558
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI ++A D D PG +ISY++ F ID+ G
Sbjct: 2493 SPAFSQSTYVAEVRENVAAGTKVIHVRATDGD-PGTYGQISYAIINDFAKDRFLIDSNGQ 2551
Query: 63 L 63
+
Sbjct: 2552 V 2552
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 16/78 (20%)
Query: 37 GMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIA 95
G N +I S S+ GD L F + EG EY I K +D E
Sbjct: 293 GANGEIESVSIVAGDPLDQFFLAKEGKW---------------LNEYKIKERKQIDWESF 337
Query: 96 PLGYNLTLRAVDKGTPPR 113
P GYNLTL+A DKG+P +
Sbjct: 338 PYGYNLTLQAKDKGSPQK 355
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D S+S+ G+ F +D G
Sbjct: 3442 NSPVFTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPPFSFSILSGNEEEEFVLDPHG 3501
Query: 62 PL 63
L
Sbjct: 3502 IL 3503
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 17/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ S+ +Y V EN P VI ++A D D N K++Y + G+ +F I
Sbjct: 1144 NAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSS-NEKLTYRITSGNPQNFFAINIKT 1202
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNI-VVLKLLDR 92
D E HF V T D G K+ I VV+++LD
Sbjct: 1203 GLITTTSRKLDREQQAEHFLEV-TVTDGGPSPKQSTIWVVVQVLDE 1247
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D++
Sbjct: 2390 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYSILSGNDRTSFLMDSKS 2448
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ GT V+ + A D G N++I+Y +R G+ G F
Sbjct: 3232 NPPVFERRDYLVTVPEDTSPGTQVLAVFATSKDI-GTNAEITYLIRSGNEQGKF------ 3284
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
KI+P T I V ++LD E+ Y L + A D GTP
Sbjct: 3285 ----------KINPKTG----GISVSEVLDYELCKRFY-LVVEAKDGGTP 3319
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 24/110 (21%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFR 67
F VKE+ P+G ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 729 FPSDVAVKEDLPVGANILKIKAYDAD-SGFNGKVLFTISDGNTDSCFNIDMETGQLK--- 784
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 785 ------------------VLMPMDREHTDL-YLLNITIYDLGNPQKSSWR 815
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y A + E+ P +++ + A DAD G N I YS+ G ++
Sbjct: 3025 NSPVCDQVAYTALLPEDIPSNKIILKVSAKDAD-IGSNGDIRYSLYGSGNSEFY------ 3077
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+DP + + + L LLDRE P+ Y+L +A D G
Sbjct: 3078 -----------LDPESGE----LKTLALLDRERIPV-YSLMAKATDGG 3109
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F ID
Sbjct: 933 SPAFIPSSYSVKVLEDLPVGTVIAWLETHDPD-LGLGGQVRYSLV-NDYNGRFEID---- 986
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 987 ----------------KASGAIRLSKELDYEKQQF-YNLTVRAKDKGRP 1018
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 25/120 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVF Y A V+ + GTL+ + A D D G N +++Y ++ D G+F I+ N
Sbjct: 2080 NSPVFVGLPYYAAVQVDAEPGTLIYQVTAIDKD-KGPNGEVTYVLQ--DDYGHFEINPNS 2136
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
G N+++ + + +++ + Y +T+ A D G P T P
Sbjct: 2137 G---------------------NVILKEAFNSDLSNIEYGVTILAKDGGKPSLSTSVELP 2175
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---------RGGDGL 52
N+PVF Y + E+ IGT +I ++A D D G N +++YSV G+
Sbjct: 827 NSPVFIQDSYSVNILESSGIGTEIIQVEARDKD-LGSNGEVTYSVLTDTQQFAINSSTGI 885
Query: 53 GYFT--IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLL 90
Y +D E N+ + + + ++ +++V LK+
Sbjct: 886 VYVADQLDRESTANYSLKIEARDKAESGQQLFSVVTLKVF 925
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 58/111 (52%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F++ +Y+A+V E+ +G+ V+ + A D D G N+++ Y++ G N G
Sbjct: 1562 HSPYFTNPLYEASVFESAALGSAVLQVTALDKD-KGENAELIYTIEAG---------NTG 1611
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F+I P + T KE ++ ++ + L+++ D+G+PP
Sbjct: 1612 --NMFKIEPV-LGIITICKEPDMTMMG---------QFVLSIKVTDQGSPP 1650
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG----LGYFTI 57
N PVF Y + E P+GT + ++A D D G N +++YS+ + F I
Sbjct: 2810 NKPVFETSSYDTVIMEGMPVGTKLTQVRAIDMD-WGANGQVTYSLHSDSQPEKVMEAFNI 2868
Query: 58 D-NEGPLNHFRIVPTKIDP 75
D N G ++ + + + DP
Sbjct: 2869 DSNTGWISTLKDLDHETDP 2887
>gi|432099002|gb|ELK28484.1| Protocadherin Fat 1 [Myotis davidii]
Length = 3387
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 58/112 (51%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A V E+ + V+T+ A DAD P +NS I YS+ G+ FTID
Sbjct: 2331 NTPVFSQDTYTAVVSEDAILEQPVLTVMADDADGP-LNSHIHYSIIDGNQGNPFTID--- 2386
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
PT+ + + V KLLDRE GY LT++A D G+PPR
Sbjct: 2387 --------PTRGE---------VKVTKLLDRETIS-GYTLTVQASDNGSPPR 2420
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N +++Y + GGD LG F ++N
Sbjct: 1916 PRFTAEIYKGTVSEDDPPGGVIAILSTTDADSEEINRQVAYYITGGDPLGQFAVEN---- 1971
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE Y LT+ A D
Sbjct: 1972 --------------IQNEWKVYVKKPLDREKRD-NYLLTITATD 2000
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 59/119 (49%), Gaps = 25/119 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP FS + TV EN GTL+ ++A DAD G+N KI+YS + D G F+I+
Sbjct: 2121 NAPEFSADPHTITVFENTEPGTLLTRVQATDAD-AGLNRKIAYSLINSAD--GQFSINEL 2177
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I + K LDRE+ + Y LT++AVD+G P R T T
Sbjct: 2178 SGI--------------------IQLEKPLDRELQAV-YTLTVKAVDQGVPRRLTATGT 2215
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 52/111 (46%), Gaps = 20/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ Y AT+ E IGT V+ ++A DAD N ISY + G +
Sbjct: 1279 NAPVFAQQAYAATLSEASVIGTSVVRVRATDADSEP-NRGISYHMSGNHSKSH------- 1330
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+HF ID T I +++ LD E + + +RAVD G PP
Sbjct: 1331 --DHFH-----IDSSTGV----ISLVRALDYEQV-RQHRIAVRAVDGGMPP 1369
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y A+V E+ +GT ++ + AA D N+ I+YS+ GG+ G F+ID+
Sbjct: 2226 NPPVFEYREYGASVSEDVLVGTEILQVYAASRDIEA-NADITYSIIGGNEHGKFSIDS-- 2282
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I +++ LD E + Y LT+ A D GTP
Sbjct: 2283 ------------------KTGAIFIIENLDYE-SSHEYYLTVEATDGGTP 2313
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 21/114 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S+ VY + EN P V+ ++A D DP N K++Y + G+ G+FTI +
Sbjct: 132 NAPQTSEPVYSPEIMENSPKDISVVHIEAFDPDPSS-NDKLTYRITSGNPQGFFTIHPK- 189
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
T + T +K LDRE + L + D G+PPR T
Sbjct: 190 ---------TGLITTTSRK---------LDREQQD-EHILEVTVTDNGSPPRST 224
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ Y ++EN+P+G V+ L D D +++ G+ G F + +G
Sbjct: 2436 NAPVFAQGNYSVIIQENKPVGFSVLQLVVTDKDSSHNGPPFFFTIESGNDDGAFEVTQQG 2495
Query: 62 PL 63
L
Sbjct: 2496 VL 2497
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P+F VY+A + E+ G V +KA DAD ++ + YS+ G+ F +D E
Sbjct: 1386 NPPLFDPHVYEAKISEHATHGHFVTCVKAYDADSSDADT-LEYSILSGNDQKSFVMDGE 1443
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N+PV Y+A + ENQP G+ VI ++A+D D G N ++ YS+
Sbjct: 1805 NSPVLESNPYEAFIVENQPGGSRVIQVRASDLD-SGANGQVMYSL 1848
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
+++PVF Y+ + EN P+ TLV +KA D D G+ I+Y +
Sbjct: 1487 LHSPVFLQNEYEVELAENAPVHTLVTAVKATDGD-AGVYGHITYHI 1531
>gi|348518842|ref|XP_003446940.1| PREDICTED: protocadherin Fat 3-like [Oreochromis niloticus]
Length = 4724
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 44/110 (40%), Positives = 55/110 (50%), Gaps = 22/110 (20%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP FSDF + +VKEN GT V+T+ A D D G + + YS++GG GLG FTID
Sbjct: 1016 APYFSDFAVRGSVKENSRAGTSVLTVNAKD-DDKGRDGVLKYSIQGGSGLGTFTIDE--- 1071
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
D G I +LD E Y LT+ AVD+G PP
Sbjct: 1072 -----------DTGV------IYTSGILDCETKD-SYWLTVCAVDRGVPP 1103
Score = 55.1 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 42/114 (36%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF Y TV E+ +GT V+ + A AD G N++I+Y++R G+ LG FTID
Sbjct: 3233 NAPVFQRRDYAVTVPEDVAVGTEVVRVLATSADI-GPNAEITYNIRSGNELGKFTID--- 3288
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+K +I V LD E+ Y LT+ A D G PP T
Sbjct: 3289 -----------------RKWGSISVADDLDFEVCK-DYYLTIEAWDNGNPPLST 3324
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ VY AT E +GT V+ + A D D G+N +++Y++ G+ G F IDN
Sbjct: 1538 NIPYFTSTVYDATAYETFSVGTSVVQVTALDKD-NGLNGQLTYTIEAGNTGGVFGIDNTT 1596
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVDKGTPP 112
L I + K LD + LG Y L++R D G PP
Sbjct: 1597 GL--------------------IFIAKELD--LTSLGFYTLSVRVTDSGFPP 1626
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 57/135 (42%), Gaps = 19/135 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ SD +Y T+ EN P VI ++A D D + S++SY + G+ +F+I
Sbjct: 1120 NAPLTSDPIYHPTIMENSPKDVSVIRIQAQDPDLTAIPSRLSYRITAGNPQNFFSINPKT 1179
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAP-----LGYNLT 102
D E HF + P T ++ V++ + D P + Y ++
Sbjct: 1180 GLITTTARKLDREQQAEHFLEITVIDGPVTTRQSTVWVIVHVQDENDNPPTFPEVTYRIS 1239
Query: 103 LRAVDKGTPPRETYK 117
L D+ Y+
Sbjct: 1240 LPERDRNKRGEPVYR 1254
Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+PVFS Y A V+EN P G+ VI ++A D D G+ +I+YS G FTID +G
Sbjct: 2479 SPVFSQRFYLAEVQENAPEGSKVIQVRATDED-SGLYGQITYSFINDLGKTQFTIDADG 2536
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS +Y V E+ +G V + A D D +N +I+YS+ GD +F ID
Sbjct: 3338 NAPAFSQDIYNLLVSEDASVGQTVTRVVAEDLDSQ-VNGRITYSILKGDRNNHFWIDPVA 3396
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L + V K LDRE+ Y+L+++A D G+P
Sbjct: 3397 GL--------------------LKVNKKLDRELVSR-YSLSVQAFDSGSP 3425
Score = 42.7 bits (99), Expect = 0.052, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 18/92 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F +Y+ +KE+ P+G +V LK D D N +S+ + GG+ G F +
Sbjct: 2920 NPPLFERELYRGAIKESDPLGEVVAILKTKDRDGTDQNRLVSFCITGGNPRGVFGL---- 2975
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
+ E+ + V LLDRE
Sbjct: 2976 --------------ALVQGEWKVYVSGLLDRE 2993
Score = 38.9 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 48/112 (42%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG--DGLGYFTIDN 59
N P+F + Y A + EN IGT V+ + A D D N+ +SY + + YF+ID+
Sbjct: 2269 NPPLFQNTSYSAVLSENSMIGTPVLQVFAQDQDTE-KNAVVSYQILSDIYNSTDYFSIDS 2327
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L I +LLD E+ +N +RA D G P
Sbjct: 2328 NSGL--------------------IYTARLLDYELIQR-HNFIVRATDSGDP 2358
Score = 38.5 bits (88), Expect = 0.78, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N P+F Y ATV E P+GT V+ ++A D D G N +++YS+
Sbjct: 2796 NKPLFETSTYVATVMEGMPVGTRVVQVRALDPD-WGSNGQVTYSL 2839
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ ++ NQ GT ++ L +D D P + ++ G+ +F++D G
Sbjct: 3443 NPPVFNPPNSTVVIQLNQAAGTTLLQLSVSDKDSPKNGPPFEFWIKSGNEGNFFSLDQTG 3502
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L R+ + AP + L ++A D G P
Sbjct: 3503 TLRCNRVFGPE----------------------APREFTLEIQATDSGKP 3530
Score = 36.2 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP+FS Y A+V EN L+ L+A+D D G+N + YS+ G+F+ID
Sbjct: 3127 NAPLFSSTHYLASVYENASPKALLTRLQASDPD-EGLNRTVLYSLVDSVN-GFFSID 3181
>gi|148886692|ref|NP_001008781.2| protocadherin Fat 3 precursor [Homo sapiens]
Length = 4557
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F+ID+E
Sbjct: 1038 LHTPYFPDFAVVGSVKENSRIGTSVLQVTARDED-SGRDGEIQYSIRDGSGLGRFSIDDE 1096
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I +LDRE Y LT+ A D+G P
Sbjct: 1097 SGV--------------------ITAADILDRETMG-SYWLTVYATDRGVVP 1127
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 2920 NAPVFAQEVYRGNVKESDPPGEVVAVLSTWDRDTSDVNRQVSYHITGGNPRGRFAL---- 2975
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 2976 --------------GLVQSEWKVYVKRPLDREEQDI-YFLNITATD 3006
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS VY A + E+ +G VI L A D D N +I +S+ GD FT+D
Sbjct: 3337 NPPKFSQDVYSAVISEDALVGDSVILLIAEDVDSQP-NGQIHFSIVNGDRDNEFTVDPVL 3395
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L + V K LDRE GY+L ++AVD G P
Sbjct: 3396 GL--------------------VKVKKKLDRERVS-GYSLLVQAVDSGIP 3424
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F +Y A V E+ P+GT V+T+ A+D D G N I+YS+ + L +
Sbjct: 468 HTPEFQQPLYDAYVNESVPVGTSVLTVSASDKD-KGENGYITYSIASLNLLPFV------ 520
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 521 -INQFTGV--------------ISTTEELDFESSPEIYRFIVRASDWGSPYRH 558
Score = 41.6 bits (96), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI ++A D D PG +ISY++ F ID+ G
Sbjct: 2493 SPAFSQSTYVAEVRENVAAGTKVIHVRATDGD-PGTYGQISYAIINDFAKDRFLIDSNGQ 2551
Query: 63 L 63
+
Sbjct: 2552 V 2552
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 16/78 (20%)
Query: 37 GMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIA 95
G N +I S S+ GD L F + EG EY I K +D E
Sbjct: 293 GANGEIESVSIVAGDPLDQFFLAKEGKW---------------LNEYKIKERKQIDWESF 337
Query: 96 PLGYNLTLRAVDKGTPPR 113
P GYNLTL+A DKG+P +
Sbjct: 338 PYGYNLTLQAKDKGSPQK 355
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D S+S+ G+ F +D G
Sbjct: 3442 NSPVFTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPPFSFSILSGNEEEEFVLDPHG 3501
Query: 62 PL 63
L
Sbjct: 3502 IL 3503
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 17/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ S+ +Y V EN P VI ++A D D N K++Y + G+ +F I
Sbjct: 1144 NAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSS-NEKLTYRITSGNPQNFFAINIKT 1202
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNI-VVLKLLDR 92
D E HF V T D G K+ I VV+++LD
Sbjct: 1203 GLITTTSRKLDREQQAEHFLEV-TVTDGGPSPKQSTIWVVVQVLDE 1247
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D++
Sbjct: 2390 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYSILSGNDRTSFLMDSKS 2448
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ GT V+ + A D G N++I+Y +R G+ G F
Sbjct: 3232 NPPVFERRDYLVTVPEDTSPGTQVLAVFATSKDI-GTNAEITYLIRSGNEQGKF------ 3284
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
KI+P T I V ++LD E+ Y L + A D GTP
Sbjct: 3285 ----------KINPKTG----GISVSEVLDYELCKRFY-LVVEAKDGGTP 3319
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 24/110 (21%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFR 67
F VKE+ P+G ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 729 FPSDVAVKEDLPVGANILKIKAYDAD-SGFNGKVLFTISDGNTDSCFNIDMETGQLK--- 784
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 785 ------------------VLMPMDREHTDL-YLLNITIYDLGNPQKSSWR 815
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y A + E+ P +++ + A DAD G N I YS+ G +F
Sbjct: 3025 NSPVCDQVAYTALLPEDIPSNKIILKVSAKDAD-IGSNGYIRYSLYGSGNSEFF------ 3077
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+DP + + + L LLDRE P+ Y+L +A D G
Sbjct: 3078 -----------LDPESGE----LKTLALLDRERIPV-YSLMAKATDGG 3109
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F ID
Sbjct: 933 SPAFIPSSYSVKVLEDLPVGTVIAWLETHDPD-LGLGGQVRYSLV-NDYNGRFEID---- 986
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 987 ----------------KASGAIRLSKELDYEKQQF-YNLTVRAKDKGRP 1018
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 25/120 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVF Y A V+ + GTL+ + A D D G N +++Y ++ D G+F I+ N
Sbjct: 2080 NSPVFVGLPYYAAVQVDAEPGTLIYQVTAIDKD-KGPNGEVTYVLQ--DDYGHFEINPNS 2136
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
G N+++ + + +++ + Y +T+ A D G P T P
Sbjct: 2137 G---------------------NVILKEAFNSDLSNIEYGVTILAKDGGKPSLSTSVELP 2175
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---------RGGDGL 52
N+PVF Y + E+ IGT +I ++A D D G N +++YSV G+
Sbjct: 827 NSPVFIQDSYSVNILESSGIGTEIIQVEARDKD-LGSNGEVTYSVLTDTQQFAINSSTGI 885
Query: 53 GYFT--IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLL 90
Y +D E N+ + + + ++ +++V LK+
Sbjct: 886 VYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVF 925
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++P F++ +Y+A+V E+ +G+ V+ + A D D G N+++ Y++ G+ F I+
Sbjct: 1562 HSPYFTNPLYEASVFESAALGSAVLQVTALDKD-KGENAELIYTIEAGNTGNMFKIE 1617
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG----LGYFTI 57
N PVF Y + E P+GT + ++A D D G N +++YS+ + F I
Sbjct: 2810 NKPVFETSSYDTIIMEGMPVGTKLTQVRAIDMD-WGANGQVTYSLHSDSQPEKVMEAFNI 2868
Query: 58 D-NEGPLNHFRIVPTKIDP 75
D N G ++ + + + DP
Sbjct: 2869 DSNTGWISTLKDLDHETDP 2887
>gi|397485377|ref|XP_003813824.1| PREDICTED: protocadherin Fat 3 [Pan paniscus]
Length = 4557
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F+ID+E
Sbjct: 1038 LHTPYFPDFAVVGSVKENSRIGTSVLQVTARDED-SGRDGEIQYSIRDGSGLGRFSIDDE 1096
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I +LDRE Y LT+ A D+G P
Sbjct: 1097 SGV--------------------ITAADILDRETMG-SYWLTVYATDRGVVP 1127
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 2920 NAPVFAQEVYRGNVKESDPPGEVVAVLSTWDRDTSDVNRQVSYHITGGNPRGRFAL---- 2975
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 2976 --------------GLVQSEWKVYVKRPLDREEQDI-YFLNITATD 3006
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS VY A + E+ +G VI L A D D N +I +S+ GD FT+D
Sbjct: 3337 NPPKFSQDVYSAVISEDALVGDSVILLIAEDVDSQP-NGQIHFSIVNGDRDNEFTVDPVL 3395
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L + V K LDRE GY+L ++AVD G P
Sbjct: 3396 GL--------------------VKVKKKLDRERVS-GYSLLVQAVDSGIP 3424
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F +Y A V E+ P+GT V+T+ A+D D G N I+YS+ + L +
Sbjct: 468 HTPEFQQPLYDAYVNESVPVGTSVLTVSASDKD-KGENGYITYSIASLNLLPFV------ 520
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 521 -INQFTGV--------------ISTTEELDFESSPEIYRFIVRASDWGSPYRH 558
Score = 41.6 bits (96), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI ++A D D PG +ISY++ F ID+ G
Sbjct: 2493 SPAFSQSTYVAEVRENVAAGTKVIHVRATDGD-PGTYGQISYAIINDFAKDRFLIDSNGQ 2551
Query: 63 L 63
+
Sbjct: 2552 V 2552
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 16/78 (20%)
Query: 37 GMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIA 95
G N +I S S+ GD L F + EG EY I K +D E
Sbjct: 293 GANGEIESVSIVAGDPLDQFFLAKEGKW---------------LNEYKIKERKQIDWESF 337
Query: 96 PLGYNLTLRAVDKGTPPR 113
P GYNLTL+A DKG+P +
Sbjct: 338 PYGYNLTLQAKDKGSPQK 355
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D S+S+ G+ F +D G
Sbjct: 3442 NSPVFTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPPFSFSILSGNEEEEFVLDPHG 3501
Query: 62 PL 63
L
Sbjct: 3502 IL 3503
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 17/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ S+ +Y V EN P VI ++A D D N K++Y + G+ +F I
Sbjct: 1144 NAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSS-NEKLTYRITSGNPQNFFAINIKT 1202
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNI-VVLKLLDR 92
D E HF V T D G K+ I VV+++LD
Sbjct: 1203 GLITTTSRKLDREQQAEHFLEV-TVTDGGPSPKQSTIWVVVQVLDE 1247
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D++
Sbjct: 2390 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYSILSGNDRTSFLMDSKS 2448
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ GT V+ + A D G N++I+Y +R G+ G F
Sbjct: 3232 NPPVFERRDYLVTVPEDTSPGTQVLAVFATSKDI-GTNAEITYLIRSGNEQGKF------ 3284
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
KI+P T I V ++LD E+ Y L + A D GTP
Sbjct: 3285 ----------KINPKTG----GISVSEVLDYELCKRFY-LVVEAKDGGTP 3319
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 24/110 (21%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFR 67
F VKE+ P+G ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 729 FPSDVAVKEDLPVGANILKIKAYDAD-SGFNGKVLFTISDGNTDSCFNIDMETGQLK--- 784
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 785 ------------------VLMPMDREHTDL-YLLNITIYDLGNPQKSSWR 815
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y A + E+ P +++ + A DAD G N I YS+ G ++
Sbjct: 3025 NSPVCDQVAYTALLPEDIPSNKIILKVSAKDAD-IGSNGDIRYSLYGSGNSEFY------ 3077
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+DP + + + L LLDRE P+ Y+L +A D G
Sbjct: 3078 -----------LDPESGE----LKTLALLDRERIPV-YSLMAKATDGG 3109
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F ID
Sbjct: 933 SPAFIPSSYSVKVLEDLPVGTVIAWLETHDPD-LGLGGQVRYSLV-NDYNGRFEID---- 986
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 987 ----------------KASGAIRLSKELDYEKQQF-YNLTVRAKDKGRP 1018
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 25/120 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVF Y A V+ + GTL+ + A D D G N +++Y ++ D G+F I+ N
Sbjct: 2080 NSPVFVGLPYYAAVQVDAEPGTLIYQVTAIDKD-KGPNGEVTYVLQ--DDYGHFEINPNS 2136
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
G N+++ + + +++ + Y +T+ A D G P T P
Sbjct: 2137 G---------------------NVILKEAFNSDLSNIEYGVTILAKDGGKPSLSTSVELP 2175
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---------RGGDGL 52
N+PVF Y + E+ IGT +I ++A D D G N +++YSV G+
Sbjct: 827 NSPVFIQDSYSVNILESSGIGTEIIQVEARDKD-LGSNGEVTYSVLTDTQQFAINSSTGI 885
Query: 53 GYFT--IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLL 90
Y +D E N+ + + + ++ +++V LK+
Sbjct: 886 VYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVF 925
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG----LGYFTI 57
N PVF Y + E P+GT + ++A D D G N +++YS+ + F I
Sbjct: 2810 NKPVFETSSYDTVIMEGMPVGTKLTQVRAIDMD-WGANGQVTYSLHSDSQPEKVMEAFNI 2868
Query: 58 D-NEGPLNHFRIVPTKIDP 75
D N G ++ + + + DP
Sbjct: 2869 DSNTGWISTLKDLDHETDP 2887
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 58/111 (52%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F++ +Y+A+V E+ +G+ V+ + A D D G N+++ Y++ G N G
Sbjct: 1562 HSPYFTNPLYEASVFESAALGSAVLQVTALDKD-KGENAELIYTIEAG---------NTG 1611
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F+I P + T KE ++ ++ + L+++ D+G+PP
Sbjct: 1612 --NTFKIEPV-LGIITICKEPDMTMMG---------QFVLSIKVTDQGSPP 1650
>gi|291384089|ref|XP_002708683.1| PREDICTED: FAT tumor suppressor homolog 3 [Oryctolagus cuniculus]
Length = 4559
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F ID+E
Sbjct: 1038 LHTPYFPDFAVVGSVKENSRIGTSVLQVTAQDED-SGRDGEIQYSIRDGSGLGRFNIDDE 1096
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I +LDRE Y LT+ A D+G P
Sbjct: 1097 SGV--------------------ITAADILDRETTG-SYWLTVYATDRGVVP 1127
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 2920 NAPVFAHEVYRGNVKESDPPGEVVAVLSTWDRDTSDINRQVSYHITGGNPRGRFAL---- 2975
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 2976 --------------GLVQSEWKVYVKRPLDREEQDI-YFLNITATD 3006
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS VY A + E+ +G VI L A D D N +I +S+ GD F +D
Sbjct: 3337 NAPQFSQDVYSAVISEDALVGDSVILLIAEDVDSQP-NGQIHFSIVSGDRDSEFAVDPVL 3395
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L + V K LDRE GY+L ++AVD G P
Sbjct: 3396 GL--------------------VKVKKKLDRERVS-GYSLLVQAVDSGFP 3424
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI ++A D D PG +ISY++ F ID+ G
Sbjct: 2493 SPAFSQSTYVAEVRENAAAGTKVIHVRATDGD-PGTYGQISYTIINDFAKDRFLIDSNGQ 2551
Query: 63 L 63
+
Sbjct: 2552 V 2552
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A V EN L+ ++A D D G+N K+ YS+ G+F+ID
Sbjct: 3127 NPPVFSSEHYNACVYENTATKALLTRVQAVDPD-VGINRKVVYSL-ADSANGFFSIDGTS 3184
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ I++ + LDRE YN+++RA D+
Sbjct: 3185 GI--------------------IILEQPLDRE-QQSSYNISVRATDQS 3211
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 17/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT----- 56
NAP+ S+ +Y V EN P VI ++A D D N K++Y + G+ +F
Sbjct: 1144 NAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSS-NEKLTYRITSGNPQNFFAMNIKT 1202
Query: 57 ---------IDNEGPLNHFRIVPTKIDPGTKKKEYNI-VVLKLLDR 92
+D E HF V T D G+ K+ I VV+++LD
Sbjct: 1203 GLITTTSRKLDREQQAEHFLEV-TVTDGGSSPKQSTIWVVVQVLDE 1247
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D S+S+ G+ F +D G
Sbjct: 3442 NSPVFTPANYTAVIQENRPVGTSILQLLVTDRDSFHNGPPFSFSILSGNEEEEFVLDPHG 3501
Query: 62 PL 63
L
Sbjct: 3502 VL 3503
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F +Y A V E+ P+GT V+ + A D D G N I+YS+ + L +
Sbjct: 468 HTPEFQQPLYDAFVNESVPVGTSVLMVSAYDKD-KGENGYITYSIASLNLLPF------- 519
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 520 AINQFTGV--------------ISTTEELDFESSPETYRFIVRASDWGSPYRH 558
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y++ V E P G V ++A+DAD ++ ++ YS+ G+ F +D++
Sbjct: 2390 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDID-RLDYSILSGNDRTSFLMDSKS 2448
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 24/110 (21%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFR 67
F VKE+ P+G ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 729 FPSDVAVKEDMPVGANILKIKAYDAD-SGFNGKVLFTISDGNTDSCFNIDMETGQLK--- 784
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 785 ------------------VLMPMDREHTDL-YLLNITIYDLGNPQKSSWR 815
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ GT V+ + A D G N++I+Y +R G+ G F
Sbjct: 3232 NPPVFERRDYLVTVPEDTSPGTQVLAVFATSKDI-GTNAEITYLIRSGNEQGKF------ 3284
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+I+P T I V ++LD E+ Y L + A D GTP
Sbjct: 3285 ----------RINPKTG----GISVSEVLDYEVCKRFY-LVVEAKDGGTP 3319
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 43/108 (39%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y A E+ P +++ + A DAD G N I YS+ G +F G
Sbjct: 3025 NSPVCDQVAYTALFPEDIPSNKIILKVSAKDAD-IGSNGDIRYSLYGSGNNEFFLDPESG 3083
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
L F P LDRE P+ YNL RA D G
Sbjct: 3084 ELKTF--AP-------------------LDRERVPV-YNLIARATDGG 3109
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 16/78 (20%)
Query: 37 GMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIA 95
G N +I S S+ GD L F + EG EY I K +D E
Sbjct: 293 GANGEIESVSIVAGDPLDQFFLAKEGKW---------------MNEYKIKERKQVDWESF 337
Query: 96 PLGYNLTLRAVDKGTPPR 113
GYNLTL+A DKG+P +
Sbjct: 338 FYGYNLTLQAKDKGSPQK 355
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 25/120 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVF Y A V+ + GTL+ + A D D G N +++Y ++ D G+F I+ N
Sbjct: 2080 NSPVFVGLPYYAAVQVDAEPGTLIYRVTAIDKD-KGANGEVTYVLQ--DDYGHFEINPNS 2136
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
G N+++ + + +++ + Y +T+ A D G P T P
Sbjct: 2137 G---------------------NVILKEAFNTDLSNIEYGVTILAKDGGKPSLSTSVELP 2175
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG----LGYFTI 57
N PVF Y+ + E P+GT + ++A D D G N +++YS+ + F I
Sbjct: 2810 NKPVFETSSYETIIMEGMPVGTKLTQVRAMDMD-WGANGQVTYSLHSDSQPEKVMEAFNI 2868
Query: 58 D-NEGPLNHFRIVPTKIDP 75
D N G ++ + + + DP
Sbjct: 2869 DSNTGWISTLKDLDHETDP 2887
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F ID
Sbjct: 933 SPTFIPSSYSVKVLEDLPVGTVIAWLETHDPD-LGLGGQVRYSLV-NDYNGRFEID---- 986
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 987 ----------------KASGAIRLSKELDYEKQQF-YNLTVRAKDKGRP 1018
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 60/119 (50%), Gaps = 9/119 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F++ +Y+A+V E+ +G+ V+ + A D D G N+++ Y++ G+ F I+
Sbjct: 1562 HSPYFTNPLYEASVFESAALGSAVLQVTALDKD-KGENAELIYTIEAGNTGNTFKIE--- 1617
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLR---AVDKGTPPRETYK 117
P+ I+ +P ++ +K+ D+ P+ +R + + P+ T+K
Sbjct: 1618 PV--LGIISVSKEPDMTTMGQFVLSVKVTDQGSPPMSATAIVRISVTMSDNSHPKFTHK 1674
>gi|297461475|ref|XP_001249786.2| PREDICTED: protocadherin Fat 4 [Bos taurus]
gi|297484612|ref|XP_002694439.1| PREDICTED: protocadherin Fat 4 [Bos taurus]
gi|296478713|tpg|DAA20828.1| TPA: fat-like [Bos taurus]
Length = 4981
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y ++ EN P+G+ V+ DAD G+NS+++YS+ GD LG FT+D G
Sbjct: 1940 NPPIFSLNSYSTSLMENLPLGSTVLVFNVTDADD-GINSQLAYSIASGDSLGQFTVDKNG 1998
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L VLK LDRE YNL ++ D P + +T +
Sbjct: 1999 VLK---------------------VLKPLDRESQSF-YNLVVQVHDLPQLPASRFTSTAQ 2036
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ VY+ + E P G+ V + A D D G+N+ + YS+ G+GLG+F I
Sbjct: 473 PVFAQQVYRVNLSEEAPPGSYVSGVSATDGDS-GLNANLRYSIVSGNGLGWFHIS----- 526
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T + G LDRE+A L + A D+G P+ +Y
Sbjct: 527 EHSGLVTTGLAGG-------------LDRELAS-QIVLNISARDQGVHPKVSY 565
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 51/108 (47%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS +Y + E P GT V + A D+D S+ SY + G+ G F+
Sbjct: 3402 PVFSLNIYSVQISEGVPTGTHVTFVSAFDSDSVPSWSRFSYFIGSGNENGAFS------- 3454
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I V LDRE P+ YNLT+ AVD GTP
Sbjct: 3455 ---------INPQTGQ----ITVTAELDRETLPI-YNLTVLAVDSGTP 3488
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y+ + EN GT + + AAD D G N ++ Y + G+ F ID+
Sbjct: 2150 NNPVFAQAMYKVEINENTLTGTDITQVFAADGD-EGTNGQVRYGIVDGNANQEFRIDSVT 2208
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I V K LDRE P Y+LT++A D+G+ PR
Sbjct: 2209 GA--------------------ITVAKPLDREKTPT-YSLTVQATDRGSTPR 2239
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD P N IS + GG NE HF + +K
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSPAANGNISVQILGG---------NEQ--RHFEVQSSK 413
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK-GTPPRETYKA 118
+ P I V LDRE P YNLT+ D G PP +A
Sbjct: 414 V-PNLSL----IKVASALDRERIP-SYNLTVSVSDNYGAPPGAAVQA 454
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N+ I Y ++ +EG
Sbjct: 246 NPPVFGSSHYQAGVPEDAAVGSSVLQVAAADAD-EGTNADIRYRLQ-----------DEG 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P ++DP T I V + LD E A Y+LT++A+D+G P
Sbjct: 294 -------TPFQMDPETGL----ITVREPLDFE-ARRQYSLTVQAMDRGVP 331
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G N+ + YS+ G + G F+
Sbjct: 1311 NTPSFPKSTLFVDVLENMRIGELVSSVTATDSD-SGDNADLHYSITGTNNHGTFS----- 1364
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1365 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1402
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF Y TV EN P GT VI L A DAD G N+ I+Y+++ D F ID
Sbjct: 3190 NSPVFLPDEYFPTVLENAPSGTTVIHLNATDAD-SGTNAVIAYTIQSSDS-DLFVID 3244
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y+ T+ E++P+ + ++A D D G N +I+YS+ G+ F I +G
Sbjct: 992 NPPVFDQLSYEVTLSESEPVNSRFFKVQAFDKD-SGANGEIAYSIAEGNTGDAFGIFPDG 1050
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D + + +VV DR + PL + + +
Sbjct: 1051 QL----YIKSELDRELQDRYVLLVVAS--DRAVEPLSATVNVTVI 1089
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A ++EN+P G+ + T+ A D D G+N I YS+ GD
Sbjct: 685 NSPVFYPVQYFAHIQENEPGGSYITTVSATDPD-LGLNGTIKYSISAGD 732
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQAT+ E+ T V+ + A+D D G N I YSV G+ F ID+
Sbjct: 1206 NAPKFLKDFYQATISESAANLTQVLRVSASDVD-EGSNGLIHYSVIKGNEERQFAIDSTS 1264
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ ++ LD E P Y+L ++AVD G
Sbjct: 1265 G--------------------QVTLIGRLDYEATP-AYSLVIQAVDSG 1291
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF + + KE+ G VI A D+D G++ + SY + G+ G F +D
Sbjct: 131 NAPVFPEPSIVVSFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIIQGNEAGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P R Y
Sbjct: 189 -----------ITLNPSGEGAFLHLVSKGGLDREVTP-QYQLLVEVEDKGEPKRRGY 233
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 22/121 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS AT+ E+ +G +V T+ A D D MN I YS+ G+ G F I++
Sbjct: 3085 HTPEFSQSHMSATIPESHSVGAIVRTVSARDRD-TAMNGLIRYSISSGNEEGIFAINSST 3143
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ + + K LD E+ + +T+ A D G R Y +
Sbjct: 3144 GV--------------------LTLAKALDYELCQ-KHEMTVSATDGGWVSRTGYCSVTV 3182
Query: 122 N 122
N
Sbjct: 3183 N 3183
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVFS Y V EN +G V ++ A+ D +NS ISY + GD G F I+
Sbjct: 789 NPPVFSQAAYSFVVFENVALGYHVGSVSASTMD---LNSNISYLITTGDQKGMFAIN 842
Score = 36.2 bits (82), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP F Y V ++ +GT +I + A D G+NS++ Y + + LG F +DN
Sbjct: 2979 NAPQFLKTKYFTPVTKHVKVGTKLIKVTAVDDKDFGLNSEVEYFILNENHLGKFKLDNH 3037
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 22/113 (19%)
Query: 4 PVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
PVFS Y +V EN P GT ++ L A D D G N + +S++ + E
Sbjct: 580 PVFSQPEGYNVSVVENAPTGTELLVLGATDGD-LGDNGTVRFSLQ----------EAETD 628
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
FR +DP + + + + LDRE Y+L + A D G+PP+ +
Sbjct: 629 QRSFR-----LDPVSGR----LSTISSLDREEQAF-YSLLVLATDMGSPPQSS 671
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 26/110 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ +Y T+ E+ P GT VI + A+D D + + +R G FT
Sbjct: 2360 NVPTFASKMYFTTIPEDAPTGTDVILVNASDID-----ASTNAVIRIIGGNSQFT----- 2409
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I+ LLDRE Y L + A D G+P
Sbjct: 2410 -----------INPSTGQ----IITSALLDRETKE-NYTLVVVASDAGSP 2443
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF + TV+EN G+ ++ L A DAD G N+ ++Y++ G F ID E
Sbjct: 1736 NPPVFPTDMLDLTVEENIGDGSKIMQLTAMDAD-EGANALVTYTIISG-ADDSFRIDPES 1793
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
++ TK ++ +Y+++V + + + N+T+ V+ TP
Sbjct: 1794 G----DLIATKRLDRERRSKYSLLVRADDGLQSSDMRINITVSDVNDHTP 1839
>gi|172045818|sp|Q8TDW7.2|FAT3_HUMAN RecName: Full=Protocadherin Fat 3; Short=hFat3; AltName:
Full=Cadherin family member 15; AltName: Full=FAT tumor
suppressor homolog 3; Flags: Precursor
Length = 4589
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F+ID+E
Sbjct: 1038 LHTPYFPDFAVVGSVKENSRIGTSVLQVTARDED-SGRDGEIQYSIRDGSGLGRFSIDDE 1096
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I +LDRE Y LT+ A D+G P
Sbjct: 1097 SGV--------------------ITAADILDRETMG-SYWLTVYATDRGVVP 1127
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 2920 NAPVFAQEVYRGNVKESDPPGEVVAVLSTWDRDTSDVNRQVSYHITGGNPRGRFAL---- 2975
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 2976 --------------GLVQSEWKVYVKRPLDREEQDI-YFLNITATD 3006
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS VY A + E+ +G VI L A D D N +I +S+ GD FT+D
Sbjct: 3337 NPPKFSQDVYSAVISEDALVGDSVILLIAEDVDSQP-NGQIHFSIVNGDRDNEFTVDPVL 3395
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L + V K LDRE GY+L ++AVD G P
Sbjct: 3396 GL--------------------VKVKKKLDRERVS-GYSLLVQAVDSGIP 3424
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F +Y A V E+ P+GT V+T+ A+D D G N I+YS+ + L +
Sbjct: 468 HTPEFQQPLYDAYVNESVPVGTSVLTVSASDKD-KGENGYITYSIASLNLLPFV------ 520
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 521 -INQFTGV--------------ISTTEELDFESSPEIYRFIVRASDWGSPYRH 558
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI ++A D D PG +ISY++ F ID+ G
Sbjct: 2493 SPAFSQSTYVAEVRENVAAGTKVIHVRATDGD-PGTYGQISYAIINDFAKDRFLIDSNGQ 2551
Query: 63 L 63
+
Sbjct: 2552 V 2552
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 16/78 (20%)
Query: 37 GMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIA 95
G N +I S S+ GD L F + EG EY I K +D E
Sbjct: 293 GANGEIESVSIVAGDPLDQFFLAKEGKW---------------LNEYKIKERKQIDWESF 337
Query: 96 PLGYNLTLRAVDKGTPPR 113
P GYNLTL+A DKG+P +
Sbjct: 338 PYGYNLTLQAKDKGSPQK 355
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D S+S+ G+ F +D G
Sbjct: 3442 NSPVFTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPPFSFSILSGNEEEEFVLDPHG 3501
Query: 62 PL 63
L
Sbjct: 3502 IL 3503
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 17/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ S+ +Y V EN P VI ++A D D N K++Y + G+ +F I
Sbjct: 1144 NAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSS-NEKLTYRITSGNPQNFFAINIKT 1202
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNI-VVLKLLDR 92
D E HF V T D G K+ I VV+++LD
Sbjct: 1203 GLITTTSRKLDREQQAEHFLEV-TVTDGGPSPKQSTIWVVVQVLDE 1247
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D++
Sbjct: 2390 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYSILSGNDRTSFLMDSKS 2448
Score = 38.9 bits (89), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ GT V+ + A D G N++I+Y +R G+ G F
Sbjct: 3232 NPPVFERRDYLVTVPEDTSPGTQVLAVFATSKDI-GTNAEITYLIRSGNEQGKF------ 3284
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
KI+P T I V ++LD E+ Y L + A D GTP
Sbjct: 3285 ----------KINPKTG----GISVSEVLDYELCKRFY-LVVEAKDGGTP 3319
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 24/110 (21%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFR 67
F VKE+ P+G ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 729 FPSDVAVKEDLPVGANILKIKAYDAD-SGFNGKVLFTISDGNTDSCFNIDMETGQLK--- 784
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 785 ------------------VLMPMDREHTDL-YLLNITIYDLGNPQKSSWR 815
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y A + E+ P +++ + A DAD G N I YS+ G +F
Sbjct: 3025 NSPVCDQVAYTALLPEDIPSNKIILKVSAKDAD-IGSNGYIRYSLYGSGNSEFF------ 3077
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+DP + + + L LLDRE P+ Y+L +A D G
Sbjct: 3078 -----------LDPESGE----LKTLALLDRERIPV-YSLMAKATDGG 3109
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F ID
Sbjct: 933 SPAFIPSSYSVKVLEDLPVGTVIAWLETHDPD-LGLGGQVRYSLV-NDYNGRFEID---- 986
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 987 ----------------KASGAIRLSKELDYEKQQF-YNLTVRAKDKGRP 1018
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 25/120 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVF Y A V+ + GTL+ + A D D G N +++Y ++ D G+F I+ N
Sbjct: 2080 NSPVFVGLPYYAAVQVDAEPGTLIYQVTAIDKD-KGPNGEVTYVLQ--DDYGHFEINPNS 2136
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
G N+++ + + +++ + Y +T+ A D G P T P
Sbjct: 2137 G---------------------NVILKEAFNSDLSNIEYGVTILAKDGGKPSLSTSVELP 2175
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---------RGGDGL 52
N+PVF Y + E+ IGT +I ++A D D G N +++YSV G+
Sbjct: 827 NSPVFIQDSYSVNILESSGIGTEIIQVEARDKD-LGSNGEVTYSVLTDTQQFAINSSTGI 885
Query: 53 GYFT--IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLL 90
Y +D E N+ + + + ++ +++V LK+
Sbjct: 886 VYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVF 925
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++P F++ +Y+A+V E+ +G+ V+ + A D D G N+++ Y++ G+ F I+
Sbjct: 1562 HSPYFTNPLYEASVFESAALGSAVLQVTALDKD-KGENAELIYTIEAGNTGNMFKIE 1617
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG----LGYFTI 57
N PVF Y + E P+GT + ++A D D G N +++YS+ + F I
Sbjct: 2810 NKPVFETSSYDTIIMEGMPVGTKLTQVRAIDMD-WGANGQVTYSLHSDSQPEKVMEAFNI 2868
Query: 58 D-NEGPLNHFRIVPTKIDP 75
D N G ++ + + + DP
Sbjct: 2869 DSNTGWISTLKDLDHETDP 2887
>gi|440902766|gb|ELR53515.1| Protocadherin Fat 4 [Bos grunniens mutus]
Length = 4963
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y ++ EN P+G+ V+ DAD G+NS+++YS+ GD LG FT+D G
Sbjct: 1921 NPPIFSLNSYSTSLMENLPLGSTVLVFNVTDADD-GINSQLAYSIASGDSLGQFTVDKNG 1979
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L VLK LDRE YNL ++ D P + +T +
Sbjct: 1980 VLK---------------------VLKPLDRESQSF-YNLVVQVHDLPQLPASRFTSTAQ 2017
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ VY+ + E P G+ V + A D D G+N+ + YS+ G+GLG+F I
Sbjct: 455 PVFAQQVYRVNLSEEAPPGSYVSGVSATDGDS-GLNANLRYSIVSGNGLGWFHIS----- 508
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T + G LDRE+A L + A D+G P+ +Y
Sbjct: 509 EHSGLVTTGLAGG-------------LDRELAS-QIVLNISARDQGVHPKVSY 547
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 51/108 (47%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS +Y + E P GT V + A D+D S+ SY + G+ G F+
Sbjct: 3385 PVFSLNIYSVQISEGVPTGTHVTFVSAFDSDSVPSWSRFSYFIGSGNENGAFS------- 3437
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I V LDRE P+ YNLT+ AVD GTP
Sbjct: 3438 ---------INPQTGQ----ITVTAELDRETLPI-YNLTVLAVDSGTP 3471
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y+ + EN GT + + AAD D G N ++ Y + G+ F ID+
Sbjct: 2131 NNPVFAQAMYKVEINENTLTGTDITQVFAADGD-EGTNGQVRYGIVDGNANQEFRIDSVT 2189
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I V K LDRE P Y+LT++A D+G+ PR
Sbjct: 2190 GA--------------------ITVAKPLDREKTPT-YSLTVQATDRGSTPR 2220
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N+ I F + +EG
Sbjct: 246 NPPVFGSSHYQAGVPEDAAVGSSVLQVAAADAD-EGTNADIR-----------FRLQDEG 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P ++DP T I V + LD E A Y+LT++A+D+G P
Sbjct: 294 -------TPFQMDPETGL----ITVREPLDFE-ARRQYSLTVQAMDRGVP 331
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ +Y T+ E+ P GT VI + A+D D N+ ISY + GG+ FT
Sbjct: 2341 NVPTFASKMYFTTIPEDAPTGTDVILVNASDID-ASTNAVISYRIIGGN--SQFT----- 2392
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I+ LLDRE Y L + A D G+P
Sbjct: 2393 -----------INPSTGQ----IITSALLDRETKE-NYTLVVVASDAGSP 2426
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 43/95 (45%), Gaps = 17/95 (17%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD P N IS + GG NE HF + +K
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSPAANGNISVQILGG---------NEQ--RHFEVQSSK 413
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ P I V LDRE P YNLT+ D
Sbjct: 414 V-PNLSL----IKVASALDRERIP-SYNLTVSVSD 442
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 52/114 (45%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F ++ V EN IG LV ++ A D+D G N+ + YS+ G + G F+I
Sbjct: 1293 NTPSFKSTLF-VDVLENMRIGELVSSVTATDSDS-GDNADLHYSITGTNNHGTFSIS--- 1347
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1348 -------------PNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1383
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF Y TV EN P GT VI L A DAD G N+ I+Y+++ D F ID
Sbjct: 3173 NSPVFLPDEYFPTVLENAPSGTTVIHLNATDAD-SGTNAVIAYTIQSSDS-DLFVID 3227
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y+ T+ E++P+ + ++A D D G N +I+YS+ G+ F I +G
Sbjct: 974 NPPVFDQLSYEVTLSESEPVNSRFFKVQAFDKD-SGANGEIAYSIAEGNTGDAFGIFPDG 1032
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D + + +VV DR + PL + + +
Sbjct: 1033 QL----YIKSELDRELQDRYVLLVVAS--DRAVEPLSATVNVTVI 1071
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A ++EN+P G+ + T+ A D D G+N I YS+ GD
Sbjct: 667 NSPVFYPVQYFAHIQENEPGGSYITTVSATDPD-LGLNGTIKYSISAGD 714
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQAT+ E+ T V+ + A+D D G N I YSV G+ F ID+
Sbjct: 1188 NAPKFLKDFYQATISESAANLTQVLRVSASDVD-EGSNGLIHYSVIKGNEERQFAIDSTS 1246
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ ++ LD E P Y+L ++AVD G
Sbjct: 1247 G--------------------QVTLIGRLDYEATP-AYSLVIQAVDSG 1273
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF + + KE+ G VI A D+D G++ + SY + G+ G F +D
Sbjct: 131 NAPVFPEPSIVVSFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIIQGNEAGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P R Y
Sbjct: 189 -----------ITLNPSGEGAFLHLVSKGGLDREVTP-QYQLLVEVEDKGEPKRRGY 233
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 22/121 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS AT+ E+ +G +V T+ A D D MN I YS+ G+ G F I++
Sbjct: 3068 HTPEFSQSHMSATIPESHSVGAIVRTVSARDRD-TAMNGLIRYSISSGNEEGIFAINSST 3126
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ + + K LD E+ + +T+ A D G R Y +
Sbjct: 3127 GV--------------------LTLAKALDYELCQ-KHEMTVSATDGGWVSRTGYCSVTV 3165
Query: 122 N 122
N
Sbjct: 3166 N 3166
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVFS Y V EN +G V ++ A+ D +NS ISY + GD G F I+
Sbjct: 771 NPPVFSQAAYSFVVFENVALGYHVGSVSASTMD---LNSNISYLITTGDQKGMFAIN 824
Score = 36.2 bits (82), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP F Y V ++ +GT +I + A D G+NS++ Y + + LG F +DN
Sbjct: 2962 NAPQFLKTKYFTPVTKHVKVGTKLIKVTAVDDKDFGLNSEVEYFILNENHLGKFKLDNH 3020
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF + TV+EN G+ ++ L A DAD G N+ ++Y++ G F ID E
Sbjct: 1717 NPPVFPTDMLDLTVEENIGDGSKIMQLTAMDAD-EGANALVTYTIISG-ADDSFRIDPES 1774
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
++ TK ++ +Y+++V + + + N+T+ V+ TP
Sbjct: 1775 G----DLIATKRLDRERRSKYSLLVRADDGLQSSDMRINITVSDVNDHTP 1820
>gi|426247077|ref|XP_004017313.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Ovis aries]
Length = 4968
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y ++ EN P+G+ V+ DAD G+NS+++YS+ GD LG FT+D G
Sbjct: 1927 NPPIFSLNSYSTSLMENLPLGSTVLVFNVTDADD-GINSQLAYSIASGDSLGQFTVDKNG 1985
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L VLK LDRE YNL ++ D P + +T +
Sbjct: 1986 VLK---------------------VLKPLDRESQSF-YNLVVQVHDLPQLPASRFTSTAQ 2023
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ VY+ + E P G+ V + A D D G+N+ + YS+ G+GLG+F I
Sbjct: 460 PVFAQQVYRVNLSEEAPPGSYVSGVSATDGDS-GLNANLRYSIVSGNGLGWFHIS----- 513
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T + G LDRE+A L + A D+G P+ +Y
Sbjct: 514 EHSGLVTTGLAGG-------------LDRELAS-QIVLNISARDQGVHPKVSY 552
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 51/108 (47%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS +Y + E P GT V + A D+D S+ SY + G+ G F+
Sbjct: 3389 PVFSLNIYSVQISEGVPTGTHVTFVSAFDSDSVPSWSRFSYFIGSGNENGAFS------- 3441
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I V LDRE P+ YNLT+ AVD GTP
Sbjct: 3442 ---------INPQTGQ----ITVTAELDRETLPI-YNLTVLAVDSGTP 3475
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y+ + EN GT +I + AAD D G N ++ Y + G+ F ID+
Sbjct: 2137 NNPVFAQAMYKVEINENTLTGTDIIQVFAADGD-EGTNGQVRYGIVDGNANQEFRIDSVT 2195
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I V K LDRE P Y+LT++A D+G+ PR
Sbjct: 2196 GA--------------------ITVAKPLDREKTPT-YSLTVQATDRGSTPR 2226
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD P N IS + GG NE HF + +K
Sbjct: 351 ASVDENAQVGTVVALLTVTDADSPAANGNISVQILGG---------NEQ--RHFEVQSSK 399
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK-GTPPRETYKA 118
+ P I V LDRE P YNLT+ D G PP +A
Sbjct: 400 V-PNLSL----IKVASALDRERIP-SYNLTVSVSDNYGAPPGAAVQA 440
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G N+ + YS+ G + G F+
Sbjct: 1298 NTPSFPKSTLFVDVLENMRIGELVSSVTATDSD-SGDNADLHYSITGTNNHGTFS----- 1351
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1352 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1389
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF Y TV EN P GT VI L A DAD G N+ I+Y+++ D F ID
Sbjct: 3177 NSPVFLPDEYFPTVLENAPSGTTVIHLNATDAD-SGTNAVIAYTIQSSDS-DLFVID 3231
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y+ T+ E++P+ + ++A D D G N +I+YS+ G+ F I +G
Sbjct: 979 NPPVFDQLSYEVTLSESEPVNSRFFKVQAFDKD-SGANGEIAYSIAEGNTGDAFGIFPDG 1037
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D + + +VV DR + PL + + +
Sbjct: 1038 QL----YIKSELDRELQDRYVLLVVAS--DRAVEPLSATVNVTVI 1076
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A ++EN+P G+ + T+ A D D G+N I YS+ GD
Sbjct: 672 NSPVFYPVQYFAHIQENEPGGSYITTVSATDPD-LGLNGTIKYSISAGD 719
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF + T KE+ G VI A D+D G++ + SY + G+ G F +D
Sbjct: 131 NAPVFPEPSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIIQGNEAGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P R Y
Sbjct: 189 -----------ITLNPSGEGAFLHLVSKGGLDREVTP-QYQLLVEVEDKGEPKRRGY 233
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQAT+ E+ T V+ + A+D D G N I YSV G+ F ID+
Sbjct: 1193 NAPKFLKDFYQATISESAANLTQVLRVSASDVD-EGNNGLIHYSVIKGNEERQFAIDSTS 1251
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ ++ LD E P Y+L ++AVD G
Sbjct: 1252 G--------------------QVTLIGRLDYEATP-AYSLVIQAVDSG 1278
Score = 38.9 bits (89), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 22/121 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS AT+ E+ +G +V T+ A D D MN I YS+ G+ G F I++
Sbjct: 3072 HTPEFSQSHMSATIPESHSVGAIVRTVSARDRD-TAMNGLIRYSISSGNEEGIFAINSST 3130
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ + + K LD E+ + +T+ A D G R Y +
Sbjct: 3131 GV--------------------LTLAKALDYELCQ-KHEMTVSATDGGWVSRTGYCSVTV 3169
Query: 122 N 122
N
Sbjct: 3170 N 3170
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVFS Y V EN +G V ++ A+ D +NS ISY + GD G F I+
Sbjct: 776 NPPVFSQAAYSFVVFENVALGYHVGSVSASTMD---LNSNISYLITTGDQKGMFAIN 829
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
N PVF YQA V E+ +G+ V+ + AADAD G N+ I Y ++
Sbjct: 246 NPPVFGSSHYQAGVPEDAAVGSSVLQVAAADAD-EGTNADIRYRLQ 290
Score = 36.2 bits (82), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP F Y V ++ +GT +I + A D G+NS++ Y + + LG F +DN
Sbjct: 2966 NAPQFLKTKYFTPVTKHVKVGTKLIKVTAVDDKDFGLNSEVEYFILNENHLGKFKLDNH 3024
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 26/110 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ +Y T+ E+ P GT VI + A+D D + + +R G FT
Sbjct: 2347 NVPTFASKMYFTTIPEDAPTGTDVILVNASDID-----ASTNAVIRIIGGNSQFT----- 2396
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I+ LLDRE Y L + A D G+P
Sbjct: 2397 -----------INPSTGQ----IITSALLDRETKE-NYTLVVVASDAGSP 2430
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF + TV+EN G+ ++ L A DAD G N+ ++Y++ G F ID E
Sbjct: 1723 NPPVFPTDMLDLTVEENIGDGSKIMQLTAMDAD-EGANALVTYTIISG-ADDSFRIDPES 1780
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
++ TK ++ +Y+++V + + + N+T+ V+ TP
Sbjct: 1781 G----DLIATKRLDRERRSKYSLLVRADDGLQSSDMRINITVSDVNDHTP 1826
>gi|348565657|ref|XP_003468619.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 3-like [Cavia
porcellus]
Length = 4527
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F ID+E
Sbjct: 1009 LHTPYFPDFAVVGSVKENSRIGTSVLQVTAQDED-SGRDGEIQYSIRDGSGLGRFNIDDE 1067
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I +LDRE Y LT+ A D+G P
Sbjct: 1068 SGV--------------------ITAADILDRETTG-SYWLTVYATDRGVVP 1098
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 2891 NAPVFAHEVYRGNVKESDPPGEVVAVLSTWDRDTSDVNRQVSYHITGGNPRGRFAL---- 2946
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 2947 --------------GLVQSEWKVYVKRPLDREEQDI-YFLNITATD 2977
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 25/109 (22%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI ++A D D PG +ISY++ F ID+ G
Sbjct: 2464 SPAFSQSTYVAEVRENAAAGTKVIHIRATDGD-PGTYGQISYAIINDFAKDRFLIDSNG- 2521
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLT--LRAVDKG 109
++ + LDRE PL +++ LRA+D G
Sbjct: 2522 --------------------QVITTERLDRE-NPLEGDVSIFLRALDGG 2549
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D S+S+ G+ F +D+ G
Sbjct: 3413 NSPVFTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPPFSFSILSGNEEEEFVLDSHG 3472
Query: 62 PL 63
L
Sbjct: 3473 IL 3474
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A V EN L+ ++A D D G+N K+ YS+ G+F+ID+
Sbjct: 3098 NPPVFSSDHYNACVYENTATKALLTRVQAVDPD-VGINRKVVYSL-ATSANGFFSIDSTS 3155
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I++ + LDRE YN+++RA D+ +P R
Sbjct: 3156 GI--------------------IILEQPLDRE-QQSSYNISVRATDQ-SPER 3185
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F +Y V E+ P+GT ++++ A+D D G N I+YS+ + L +
Sbjct: 468 HTPEFQQSLYDTFVNESVPVGTSILSVSASDKD-KGENGYITYSIASLNLLPF------- 519
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 520 AINQFTGV--------------ISTTEELDFESSPETYRFIVRASDWGSPYRH 558
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 17/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ S+ +Y V EN P VI ++A D D N K++Y + G+ +F I
Sbjct: 1115 NAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSS-NEKLTYRITSGNPQNFFAINIKT 1173
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNI-VVLKLLDR 92
D E HF V T D G+ K+ + VV+++LD
Sbjct: 1174 GLITTTSRKLDREQQAEHFLEV-TVTDGGSSPKQSTVWVVVQVLDE 1218
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS VY + E+ +G VI L A D D N +I +S+ GD DNE
Sbjct: 3308 NPPKFSQDVYSTVISEDALVGDSVILLIAEDVDSQP-NGQIRFSIVSGDR------DNE- 3359
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
F + P KKK LDRE GY+L ++AVD G P
Sbjct: 3360 ----FAVDPVLGLVKVKKK---------LDRERVS-GYSLLVQAVDGGIP 3395
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 24/104 (23%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFRIVPTKI 73
VKEN P+G ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 735 VKENLPVGANILKIKAYDAD-SGFNGKVLFTISDGNTDSCFNIDMETGQLK--------- 784
Query: 74 DPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 785 ------------VLMPMDREHTDL-YLLNITIYDLGNPQKSSWR 815
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D++
Sbjct: 2361 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYSILSGNDRTSFLMDSKS 2419
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y A+ E+ P +++ + A DAD G + I YS+ G +F
Sbjct: 2996 NSPVCDQVAYTASFPEDIPSNKIILKVGANDAD-IGSSGDIRYSLYGSGSNEFF------ 3048
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+DP + + + L LLDRE P+ YNL RA D G
Sbjct: 3049 -----------LDPESGE----LKTLALLDRERVPV-YNLIARATDGG 3080
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 16/78 (20%)
Query: 37 GMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIA 95
G N +I S S+ GD L F + EG EY I K +D
Sbjct: 293 GANGEIESVSIVAGDPLDQFFLAKEGKW---------------MNEYKIKERKQVDWASF 337
Query: 96 PLGYNLTLRAVDKGTPPR 113
P GYNLTL+A DKG+P +
Sbjct: 338 PYGYNLTLQAKDKGSPQK 355
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG----LGYFTI 57
N PVF Y+ + E P+GT + ++A D D G N +++YS+ + F I
Sbjct: 2781 NKPVFETSSYETIIMEGMPVGTKLTQVRATDMD-WGANGQVTYSLHSDSHPEKVMEAFNI 2839
Query: 58 D-NEGPLNHFRIVPTKIDPG 76
D N G ++ + + + DP
Sbjct: 2840 DSNTGWISTLKDLDHETDPA 2859
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 25/120 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVF Y A V+ + GTL+ + A D D G N +++Y ++ D G+F I+ N
Sbjct: 2051 NSPVFVGLPYYAAVQVDAEPGTLIYRVTAIDRD-KGANGEVTYVLQ--DDYGHFEINPNS 2107
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
G N+++ + + +++ + Y +T+ A D G P T P
Sbjct: 2108 G---------------------NVILKEAFNSDLSNIEYEVTVVAKDGGKPSLSTSVELP 2146
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 48/110 (43%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ GT V+ + A D G N++I+Y +R G+ G F
Sbjct: 3203 NPPVFERRDYLVTVPEDTSPGTQVLAVFATSKDI-GTNAEITYLIRSGNEQGKF------ 3255
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+I+P T I V + LD E Y L + A D GTP
Sbjct: 3256 ----------RINPKTG----GISVSEALDYESCKRFY-LVVEAKDGGTP 3290
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 45/112 (40%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG--DGLGYFTIDN 59
N P+F Y T+ E IGT V+ + ++D D G N + Y + + YF ID+
Sbjct: 2254 NPPIFDQHTYNTTLSEASLIGTPVLQVVSSDID-SGNNKMVHYQIVQDTYNSTDYFHIDS 2312
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L I+ ++LD E+ L +RA D G P
Sbjct: 2313 SSGL--------------------ILTARMLDHELVQ-HCTLKVRATDNGFP 2343
>gi|119582077|gb|EAW61673.1| FAT tumor suppressor homolog 2 (Drosophila) [Homo sapiens]
Length = 4349
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ FV+Q V+EN P GT VI + A D D G++ ++ Y +R G GL F+I+ +
Sbjct: 1027 LHPPHFASFVHQGQVQENSPSGTQVIVVAAQD-DDSGLDGELQYFLRAGTGLAAFSINQD 1085
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I L LDRE A Y LT+ AVD+G+ P
Sbjct: 1086 TGM--------------------IQTLAPLDREFASY-YWLTVLAVDRGSVP 1116
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 54/109 (49%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y V EN +G +++T+ A D D P +NS I+YS+ GG+ LG+FTI
Sbjct: 3319 PQFPQDPYSTRVLENALVGDVILTVSATDEDGP-LNSDITYSLIGGNQLGHFTI------ 3371
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+ + V K LDRE A Y+L LRA D G PP
Sbjct: 3372 --------------HPKKGELQVAKALDREQAS-SYSLKLRATDSGQPP 3405
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 40/92 (43%), Gaps = 18/92 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y+ +V EN G LV TLK DAD N +++ + GD LG F I G
Sbjct: 2902 NAPRFASEEYRGSVVENSEPGELVATLKTLDADISEQNRQVTCYITEGDPLGQFGISQVG 2961
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
E+ I K LDRE
Sbjct: 2962 ------------------DEWRISSRKTLDRE 2975
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P FS VY ++ E P T VI L A+D D G N +SY + G D +F I+
Sbjct: 2268 NPPTFSQLVYTTSISEGLPAQTPVIQLLASDQD-SGRNRDVSYQIVEDGSDVSKFFQIN- 2325
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G+ + + ++ LD E A +++ +RA+DKG PP
Sbjct: 2326 ----------------GSTGE---MSTVQELDYE-AQQHFHVKVRAMDKGDPP 2358
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP+F+ Y T+ EN P GT V+ + A D D G N ++YS+ G L
Sbjct: 454 HAPLFNRSSYDGTLDENIPPGTSVLAVTATDRD-HGENGYVTYSIAGPKAL--------- 503
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P IDP I K +D E+ Y +RA D G+P R
Sbjct: 504 --------PFSIDPYLGI----ISTSKPMDYELMKRIYTFRVRASDWGSPFR 543
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P S V+ +++E+ P+GT V+ L A D D K+++++ G+ +G+F I
Sbjct: 1133 NPPQMSQAVFYPSIQEDAPVGTSVLQLDAWDPDSSS-KGKLTFNITSGNHMGFFMIH--- 1188
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLD 91
P+ ++D + K+ +I+ + +LD
Sbjct: 1189 PVTGLLSTAQQLD--RENKDEHILEVTVLD 1216
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++ P F+ Y+A+V + GT ++ ++A DAD G+N+++ YS+ G+ G+F I+
Sbjct: 1550 LHPPRFTQLHYEASVPDTIAPGTELLQVRAMDAD-RGVNAEVHYSLLKGNSEGFFNIN 1606
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 46/111 (41%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y TV+EN PIG+ V+ L +D D P S+ + G N G
Sbjct: 3422 NPPRFFQLNYSTTVQENSPIGSKVLQLILSDPDSPENGPPYSFRITKG---------NNG 3472
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ FR+ P +V + L R A Y L ++A D G PP
Sbjct: 3473 --SAFRVTPDGW----------LVTAEGLSRR-AQEWYQLQIQASDSGIPP 3510
Score = 38.9 bits (89), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR---GGDGLGYFTID 58
N PVF Y+A + EN P+GT VI + A D D G + ++SY + G + F ID
Sbjct: 2793 NRPVFEADPYKAVLTENMPVGTSVIQVTAIDKD-TGRDGQVSYRLSADPGSNVHELFAID 2851
Query: 59 NEG 61
+E
Sbjct: 2852 SES 2854
>gi|13787217|ref|NP_001438.1| protocadherin Fat 2 precursor [Homo sapiens]
gi|296434503|sp|Q9NYQ8.2|FAT2_HUMAN RecName: Full=Protocadherin Fat 2; Short=hFat2; AltName:
Full=Cadherin family member 8; AltName: Full=Multiple
epidermal growth factor-like domains protein 1;
Short=Multiple EGF-like domains protein 1; Flags:
Precursor
Length = 4349
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ FV+Q V+EN P GT VI + A D D G++ ++ Y +R G GL F+I+ +
Sbjct: 1027 LHPPHFASFVHQGQVQENSPSGTQVIVVAAQD-DDSGLDGELQYFLRAGTGLAAFSINQD 1085
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I L LDRE A Y LT+ AVD+G+ P
Sbjct: 1086 TGM--------------------IQTLAPLDREFASY-YWLTVLAVDRGSVP 1116
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 54/109 (49%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y V EN +G +++T+ A D D P +NS I+YS+ GG+ LG+FTI
Sbjct: 3319 PQFPQDPYSTRVLENALVGDVILTVSATDEDGP-LNSDITYSLIGGNQLGHFTI------ 3371
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+ + V K LDRE A Y+L LRA D G PP
Sbjct: 3372 --------------HPKKGELQVAKALDREQAS-SYSLKLRATDSGQPP 3405
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 40/92 (43%), Gaps = 18/92 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y+ +V EN G LV TLK DAD N +++ + GD LG F I G
Sbjct: 2902 NAPRFASEEYRGSVVENSEPGELVATLKTLDADISEQNRQVTCYITEGDPLGQFGISQVG 2961
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
E+ I K LDRE
Sbjct: 2962 ------------------DEWRISSRKTLDRE 2975
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P FS VY ++ E P T VI L A+D D G N +SY + G D +F I+
Sbjct: 2268 NPPTFSQLVYTTSISEGLPAQTPVIQLLASDQD-SGRNRDVSYQIVEDGSDVSKFFQIN- 2325
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G+ + + ++ LD E A +++ +RA+DKG PP
Sbjct: 2326 ----------------GSTGE---MSTVQELDYE-AQQHFHVKVRAMDKGDPP 2358
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP+F+ Y T+ EN P GT V+ + A D D G N ++YS+ G L
Sbjct: 454 HAPLFNRSSYDGTLDENIPPGTSVLAVTATDRD-HGENGYVTYSIAGPKAL--------- 503
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P IDP I K +D E+ Y +RA D G+P R
Sbjct: 504 --------PFSIDPYLGI----ISTSKPMDYELMKRIYTFRVRASDWGSPFR 543
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++ P F+ Y+A+V + GT ++ ++A DAD G+N+++ YS+ G+ G+F I+
Sbjct: 1550 LHPPRFTQLHYEASVPDTIAPGTELLQVRAMDAD-RGVNAEVHYSLLKGNSEGFFNIN 1606
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P S V+ +++E+ P+GT V+ L A D D K+++++ G+ +G+F I
Sbjct: 1133 NPPQMSQAVFYPSIQEDAPVGTSVLQLDAWDPDSSS-KGKLTFNITSGNYMGFFMIH--- 1188
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLD 91
P+ ++D + K+ +I+ + +LD
Sbjct: 1189 PVTGLLSTAQQLD--RENKDEHILEVTVLD 1216
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 46/111 (41%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y TV+EN PIG+ V+ L +D D P S+ + G N G
Sbjct: 3422 NPPRFFQLNYSTTVQENSPIGSKVLQLILSDPDSPENGPPYSFRITKG---------NNG 3472
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ FR+ P +V + L R A Y L ++A D G PP
Sbjct: 3473 --SAFRVTPDGW----------LVTAEGLSRR-AQEWYQLQIQASDSGIPP 3510
Score = 38.9 bits (89), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR---GGDGLGYFTID 58
N PVF Y+A + EN P+GT VI + A D D G + ++SY + G + F ID
Sbjct: 2793 NRPVFEADPYKAVLTENMPVGTSVIQVTAIDKD-TGRDGQVSYRLSADPGSNVHELFAID 2851
Query: 59 NEG 61
+E
Sbjct: 2852 SES 2854
>gi|7407144|gb|AAF61928.1|AF231022_1 protocadherin Fat 2 [Homo sapiens]
Length = 4349
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ FV+Q V+EN P GT VI + A D D G++ ++ Y +R G GL F+I+ +
Sbjct: 1027 LHPPHFASFVHQGQVQENSPSGTQVIVVAAQD-DDSGLDGELQYFLRAGTGLAAFSINQD 1085
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I L LDRE A Y LT+ AVD+G+ P
Sbjct: 1086 TGM--------------------IQTLAPLDREFASY-YWLTVLAVDRGSVP 1116
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 54/109 (49%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y V EN +G +++T+ A D D P +NS I+YS+ GG+ LG+FTI
Sbjct: 3319 PQFPQDPYSTRVLENALVGDVILTVSATDEDGP-LNSDITYSLIGGNQLGHFTI------ 3371
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+ + V K LDRE A Y+L LRA D G PP
Sbjct: 3372 --------------HPKKGELQVAKALDREQAS-SYSLKLRATDSGQPP 3405
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 40/92 (43%), Gaps = 18/92 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y+ +V EN G LV TLK DAD N +++ + GD LG F I G
Sbjct: 2902 NAPRFASEEYRGSVVENSEPGELVATLKTLDADISEQNRQVTCYITEGDPLGQFGISQVG 2961
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
E+ I K LDRE
Sbjct: 2962 ------------------DEWRISSRKTLDRE 2975
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P FS VY ++ E P T VI L A+D D G N +SY + G D +F I+
Sbjct: 2268 NPPTFSQLVYTTSISEGLPAQTPVIQLLASDQD-SGRNRDVSYQIVEDGSDVSKFFQIN- 2325
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G+ + + ++ LD E A +++ +RA+DKG PP
Sbjct: 2326 ----------------GSTGE---MSTVQELDYE-AQQHFHVKVRAMDKGDPP 2358
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP+F+ Y T+ EN P GT V+ + A D D G N ++YS+ G L
Sbjct: 454 HAPLFNRSSYDGTLDENIPPGTSVLAVTATDRD-HGENGYVTYSIAGPKAL--------- 503
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P IDP I K +D E+ Y +RA D G+P R
Sbjct: 504 --------PFSIDPYLGI----ISTSKPMDYELMKRIYTFRVRASDWGSPFR 543
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++ P F+ Y+A+V + GT ++ ++A DAD G+N+++ YS+ G+ G+F I+
Sbjct: 1550 LHPPRFTQLHYEASVPDTIAPGTELLQVRAMDAD-RGVNAEVHYSLLKGNSEGFFNIN 1606
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P S V+ +++E+ P+GT V+ L A D D K+++++ G+ +G+F I
Sbjct: 1133 NPPQMSQAVFYPSIQEDAPVGTSVLQLDAWDPDSSS-KGKLTFNITSGNYMGFFMIH--- 1188
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLD 91
P+ ++D + K+ +I+ + +LD
Sbjct: 1189 PVTGLLSTAQQLD--RENKDEHILEVTVLD 1216
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 44/111 (39%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y TV+EN PIG+ V+ L +D D P S+ + G+ F + +G
Sbjct: 3422 NPPRFFQLNYSTTVQENSPIGSKVLQLILSDPDSPENGPPYSFRITKGNNGSAFRVTPDG 3481
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L V + L R A Y L ++A D G PP
Sbjct: 3482 WL---------------------VTAEGLSRR-AQEWYQLQIQASDSGIPP 3510
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR---GGDGLGYFTID 58
N PVF Y+A + EN P+GT VI + A D D G + ++SY + G + F ID
Sbjct: 2793 NRPVFEADPYKAVLTENMPVGTSVIQVTAIDKD-TGRDGQVSYRLSADPGSNVHELFAID 2851
Query: 59 NEG 61
+E
Sbjct: 2852 SES 2854
>gi|390460196|ref|XP_002745206.2| PREDICTED: protocadherin Fat 1 [Callithrix jacchus]
Length = 4541
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 58/112 (51%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVFS Y A + E+ + VIT+ A DAD P +NS I YS+ G+ FTID
Sbjct: 3302 NSPVFSQATYTAVISEDAVLEQSVITVMADDADGP-LNSHIHYSIIDGNRGSSFTID--- 3357
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P + + + V +LLDRE GY LT++A D G+PP+
Sbjct: 3358 --------PVRGE---------VKVTRLLDRETIS-GYTLTVQASDNGSPPK 3391
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 58/116 (50%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVFS FV + VKE+ PIG+LV+T+ A D D G + ++ YS+R G G+G F I E
Sbjct: 1029 LHPPVFSSFVEKGAVKEDAPIGSLVMTVSAHDED-AGRDGEVRYSIRDGSGVGVFKIGEE 1087
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE + Y LT+ A D+G P ++
Sbjct: 1088 TGV--------------------IETSDRLDRE-STSHYWLTVFATDQGVVPLSSF 1122
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G +V L D D +N +++Y + GGD LG F ++N
Sbjct: 2916 PRFTAEIYKGTVSEDDPPGGVVAILSTTDDDSEEINRQVTYFITGGDALGQFAVEN---- 2971
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE Y LT+ A D
Sbjct: 2972 --------------VQNEWKVYVKKPLDREQRD-NYLLTITATD 3000
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 50/112 (44%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A EN P+GT V++L A D D G N ++YS+
Sbjct: 459 NPPEFTQTAYKAAFDENVPVGTTVMSLSAVDPD-EGENGYVTYSI--------------A 503
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
LN VP ID T + + +D E+ P Y L +RA D G P R
Sbjct: 504 NLNR---VPFVIDHFTGA----VSTAENMDYELMPRVYTLRIRASDWGLPYR 548
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 23/117 (19%)
Query: 2 NAPVFSDFVYQAT-VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+AP F + A V+ENQP+G+ VI + + D D G N K+ Y++ GG+ F ID E
Sbjct: 712 HAPQFRSALPTAVQVRENQPVGSSVILMNSTDLD-TGFNGKLVYAISGGNEDSCFIIDME 770
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ + +L LDRE Y L + D G P + ++
Sbjct: 771 TGM--------------------LKILSPLDRETTD-KYTLNITVYDLGIPQKAAWR 806
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P+F +Y+A + E+ P G V +KA DAD ++ K+ YS+ G+ +F +D+
Sbjct: 2386 NLPLFEQQIYEARISEHAPHGHFVTCVKAYDADSSDVD-KLQYSILSGNDQKHFVVDS 2442
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 10 VYQATVKENQPIGTLV-ITLKAADADPPGMNSKISYSVRGGDG-LGYFTIDNEGPLNHFR 67
V+ E P+ T V ++ D DP + +G +G + +I L FR
Sbjct: 245 VHIEQANECAPVITAVTLSPSELDRDPTYAIVTVDDCDQGANGEIASLSIVAGDLLQQFR 304
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
V + PG+K EY + + +D + P GYNLTL+A DKGTPP+
Sbjct: 305 TVRSF--PGSK--EYKVRAIGGVDWDSHPFGYNLTLQAKDKGTPPQ 346
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ +G++V+ + A D D G N+++ YS+ G N G
Sbjct: 1558 HAPWFTSSSYKGRVYESAAVGSVVLQVTALDKD-KGKNAEVLYSIESG---------NVG 1607
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F I P T K+ LDR + Y+L ++A DKG+PP
Sbjct: 1608 --NSFMIDPVLGSIKTAKE---------LDRN-NQVEYDLMVKATDKGSPP 1646
Score = 41.6 bits (96), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ +GT V+ + AA D N+ I+YS+ G+ G F++D+
Sbjct: 3197 NPPVFEYREYGATVSEDVLVGTEVLQVYAASRDIEA-NADITYSIISGNEHGKFSLDS-- 3253
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + ++ LD E + Y LT+ A D GTP
Sbjct: 3254 ------------------KTGAVFIIGNLDYE-SSHEYYLTVEATDGGTP 3284
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 24/111 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG--GDGLGYFTIDNEG 61
PVF+ Y AT+ E +GT V+ ++A D+D N ISY + G +F ID+
Sbjct: 2281 PVFAQQSYAATLSEASVVGTSVVQVRATDSDSEP-NRGISYQMFGNLSQSHDHFHIDSSS 2339
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L I +L+ LD E + + +RAVD G PP
Sbjct: 2340 GL--------------------ISLLRTLDYE-QSRQHTILVRAVDGGMPP 2369
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
N+PVF Y+A + EN P GT VI ++A+DAD G N ++ Y
Sbjct: 2805 NSPVFESSPYEAFIVENLPAGTRVIQIRASDAD-SGTNGQVMY 2846
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 23/101 (22%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
Y+ V+E+ P GT+V+ L+A+D D G + ++ YS+ G G F +D
Sbjct: 932 YRVKVREDLPEGTVVMWLEASDPD-LGQSGQVRYSLM-DHGEGNFDVD------------ 977
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT++A DKG P
Sbjct: 978 --------KLSGAVRIVQQLDFEKKQV-YNLTVKAKDKGKP 1009
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS Y ++EN+P+G V+ L D D +++ G+ F ++ +G
Sbjct: 3407 NAPAFSRENYSVVIQENKPVGFSVLQLVVTDRDSSHNGPPFFFAIVSGNEEKVFEVNQQG 3466
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPL 97
++ T K++++ ++ +K+ D PL
Sbjct: 3467 ------VLLTSAAIKRKERDHYLLQVKVADNGKPPL 3496
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y+ +++ + GT VI + A+DAD G N+ ++Y++ D+E
Sbjct: 2592 NAPQFRATRYEVSIRSSAAKGTSVIKVLASDAD-EGSNADVTYAIEA---------DSES 2641
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I K+ KE L L+ E + +RA D G+P RE+
Sbjct: 2642 VKENLEI--NKLSGVIATKE----SLIGLENEF----FTFFVRATDNGSPSRES 2685
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 21/114 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S+ VY V EN P V+ ++A D D N ++ Y + G+ G+F+I +
Sbjct: 1135 NAPQTSEPVYYPEVMENSPKDVSVVQIEAFDPDSSS-NDRLMYRITSGNPQGFFSIHPK- 1192
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
T + T +K LDRE + L + D G+PP+ T
Sbjct: 1193 ---------TGLITTTSRK---------LDREQQD-EHILEVTVTDNGSPPKST 1227
>gi|327274092|ref|XP_003221812.1| PREDICTED: protocadherin Fat 4-like [Anolis carolinensis]
Length = 4863
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 61/110 (55%), Gaps = 15/110 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS +YQA V E+ P+G V+ + AADAD G N+ I Y + G + G +D G
Sbjct: 236 NPPVFSQTLYQARVPEDAPVGASVLQVTAADAD-EGTNADIRYRLEGAESAG---VDGAG 291
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L P ++DP + I + + LD E+ Y+LT++A+D+G P
Sbjct: 292 AL------PFEVDPESGV----IRIREALDYELR-RQYSLTVQAIDRGVP 330
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 14/120 (11%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF VYQ + E P G+ V L A D D G+N+ + Y++ G+ LG+F I
Sbjct: 487 PVFGQSVYQVNISEEVPPGSYVEGLSATDRD-SGLNANLKYNIVSGNDLGWFCIS----- 540
Query: 64 NHFRIVPTKIDPGT-------KKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T P T + +I+ LDREIA L + A D+G P+ +Y
Sbjct: 541 EHSGLVTTTKSPDTPMARALLGESSPSIIASGGLDREIAS-HVVLNISARDQGVQPKISY 599
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS Y ++ EN G+ + DAD G NS++SYS+ GD L F ID G
Sbjct: 1984 NAPIFSMDSYSTSLMENLSPGSTIFLFNVTDADD-GSNSQLSYSITSGDSLSQFNIDKNG 2042
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L+ + + LDRE Y+L ++ D + P + +T +
Sbjct: 2043 ILS---------------------IRQPLDRESQSF-YSLIVQVHDMASLPTSRFTSTTQ 2080
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y+ + EN GT V+ + + D D G N ++ Y++ G+ I+NE
Sbjct: 2194 NNPVFAQKLYKIEIAENILTGTDVVQVSSTDGD-EGSNGQVRYAIISGN------INNE- 2245
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
FR ID T I V K LDRE P Y+LT+++ D+G+ PR
Sbjct: 2246 ----FR-----IDSVTGV----ITVGKSLDREKKP-SYSLTVQSADRGSSPR 2283
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ VY + E P+GT V + A D+D ++ SY + G+ G F+
Sbjct: 3446 PVFNLEVYNVQISEGVPVGTHVTFVSAFDSDSLPSWNRFSYFIGNGNHNGAFS------- 3498
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + + V LDRE P+ YNL + A+D G P
Sbjct: 3499 ---------INPQTGQ----VTVTAELDRETLPV-YNLCVLAIDSGAP 3532
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVFS Y +V EN P GT VI L A DAD G N+ I+Y+V+ D F ID
Sbjct: 3234 NSPVFSPEDYFPSVLENAPSGTTVIHLSATDAD-SGSNAVIAYAVQSSDS-DLFVID 3288
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 48/108 (44%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F +YQATV E T V+ + A+D D G N I YSV G+ FTIDN
Sbjct: 1250 NVPKFLKELYQATVSELAANLTQVLRVSASDVD-EGKNGLIHYSVIKGNEEKQFTIDN-- 1306
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ ++ LD E A Y+LT++AVD G
Sbjct: 1307 ------------------STGQVTLIGKLDHE-ATASYSLTIQAVDSG 1335
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F V EN IG LV ++ A D+D G N+ + YS+ G + G F+
Sbjct: 1355 NSPSFPKSTLFVDVLENMRIGELVSSVTATDSD-SGDNADLHYSITGTNNHGTFS----- 1408
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E + Y L + A DKG PP+ +
Sbjct: 1409 -----------ISPNTG----SIFLAKALDFETQSM-YKLNITAKDKGRPPQSS 1446
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF Y+ T+ E +P+ + ++ A+D D G N +I+Y++ G+ F I +G
Sbjct: 1036 NSPVFDQLSYEVTISELEPVNSRFFSVHASDKD-SGENGEIAYNIIEGNTGDAFGIFPDG 1094
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D + +E +V+ DR + PL + + +
Sbjct: 1095 QL----YIKSELD--RELQERYTLVVAASDRAVEPLSATVNVSVI 1133
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 44/100 (44%), Gaps = 17/100 (17%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN GT+V L +DAD P N IS ++ GG+ HF + +K
Sbjct: 364 ASVDENAAPGTVVALLTVSDADSPAANGNISVAILGGN-----------EQRHFEVQSSK 412
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ P I V LDRE P YNLT+ D P
Sbjct: 413 V-PNLSL----IKVAAALDRERIPT-YNLTVAVTDNFGAP 446
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N+P+F Y A ++EN+P G+ V T+ A+D D G+N + Y++ GD F I N+
Sbjct: 729 NSPLFYPVQYFAHIQENEPAGSYVATVSASDPD-LGINGTVRYTISAGD-TSRFQIHNQ 785
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 53/117 (45%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMN--SKISYSVRGGDGLGYFTIDN 59
NAP+F D T KE+ G +I A DAD G N SY + GG N
Sbjct: 121 NAPIFPDPSIVVTFKEDTGSGRQLILDTATDAD-SGTNGVDHSSYRIVGG---------N 170
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
EG FR+ T ++P + ++V LDRE P Y L L+ DKG P + Y
Sbjct: 171 EG--GRFRLNIT-LNPSGEGAFLHLVSRGGLDREATP-AYQLLLQVEDKGEPRKRGY 223
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF + TV+EN G+ ++ L A DAD G N+ ++Y++ G G F ID E
Sbjct: 1780 NPPVFPTDMLDLTVEENIGDGSKIMQLTAMDAD-EGANALVTYTIISG-ADGSFHIDPES 1837
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
++ TK ++ +Y+++V + + + N+T+ V+ P
Sbjct: 1838 G----ELIATKRLDRERRSKYSLLVRADDGLQSSDMRINITVSDVNDHIP 1883
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG-GDGLGYFTIDNE 60
N P+ S + + EN GTLV+TL+++D D P SY + G YF+++
Sbjct: 3550 NGPILS--TTEGEIMENSRAGTLVMTLQSSDPDLPPNQGPFSYHLLSTGTATSYFSLNTA 3607
Query: 61 GPLNHFR 67
G L+ R
Sbjct: 3608 GVLSTTR 3614
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 23/99 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL-NHFRIVPTK 72
++ EN P+G+ VI++ A D D +N ++ Y TI + P NHF+I K
Sbjct: 1472 SIVENIPVGSSVISVTAHDPD-ADINGQLVY-----------TIIQQMPRGNHFQIDEVK 1519
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
GT I +DRE A L + LT++A+D+ P
Sbjct: 1520 ---GT------IYTSAEIDREFANL-FELTVKAIDQAVP 1548
>gi|355688167|gb|AER98413.1| FAT tumor suppressor-like protein 1 [Mustela putorius furo]
Length = 1538
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 44/112 (39%), Positives = 57/112 (50%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVFS Y A + E+ + VIT+ A D D P NS I YS+ G+ FTID
Sbjct: 490 NSPVFSQDTYTAVISEDALLEQSVITVMADDTDGPS-NSHIRYSIIDGNQGSPFTID--- 545
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
PT+ + + V KLLDRE GY LT++A D G+PPR
Sbjct: 546 --------PTRGE---------VKVTKLLDRETIS-GYTLTVQASDNGSPPR 579
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N +++Y + GGD LG F I+N
Sbjct: 75 PRFTAEIYKGTVSEDDPPGGVIAILSTTDADSEEINRQVTYYITGGDPLGQFAIEN---- 130
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE Y LT+ A D
Sbjct: 131 --------------IQNEWKVYVKKPLDREKRD-NYLLTITATD 159
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 45/119 (37%), Positives = 59/119 (49%), Gaps = 25/119 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP FS +Y TV EN GTL+ ++A DAD G+N KISYS + D G F+I+
Sbjct: 280 NAPEFSADLYAITVFENTEPGTLLTRVQATDAD-AGLNQKISYSLIDSAD--GQFSINEL 336
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I + K LDRE + Y LTL+A D+G P R T +T
Sbjct: 337 SGI--------------------IQLEKPLDREQQAV-YTLTLKATDQGLPRRLTATST 374
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ IGT V+ + AA D N++I+YS+ G+ G F+ID+
Sbjct: 385 NPPVFEYREYGATVSEDILIGTEVLQVYAASRDIEA-NAEITYSIISGNEHGKFSIDS-- 441
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I +++ LD E + Y LT+ A D GTP
Sbjct: 442 ------------------KTGAIFIIENLDYE-SSHEYYLTVEATDGGTP 472
Score = 42.4 bits (98), Expect = 0.070, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y ++EN+P+G V+ L D D ++V G+ G F ++ +G
Sbjct: 595 NAPVFSRENYSVIIQENKPVGFSVLQLVVTDRDSSHNGPPFFFTVVSGNEDGAFEVNQQG 654
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPL 97
++ T K+K++ ++ +K+ D PL
Sbjct: 655 ------VLLTSAAVKRKEKDHYLLHVKVADNGKPPL 684
>gi|410972447|ref|XP_003992671.1| PREDICTED: protocadherin Fat 3 isoform 1 [Felis catus]
Length = 4557
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F ID+E
Sbjct: 1038 LHTPYFPDFAVVGSVKENSRIGTSVLQVAAQDEDS-GRDGEIQYSIRDGSGLGRFNIDDE 1096
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I +LDRE Y LT+ A D+G P
Sbjct: 1097 SGV--------------------ISTADILDRETTG-SYWLTVYATDRGVVP 1127
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 2920 NAPVFAHEVYRGNVKESDPPGEVVAVLSTWDRDTSDINRQVSYHITGGNPRGRFAL---- 2975
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 2976 --------------GLVQSEWKVYVKRPLDREEQDI-YFLNITATD 3006
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 52/110 (47%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS VY A + E+ +G VI L A DAD P N +I +S+ GD D+E
Sbjct: 3337 NPPRFSQDVYSAVISEDALVGDSVILLIAEDADSPP-NGQIHFSIVNGDR------DDE- 3388
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
F + P KKK LDRE GY+L ++AVD G P
Sbjct: 3389 ----FAVEPVLGLVKVKKK---------LDRERVS-GYSLLVQAVDSGIP 3424
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A V EN L+ ++A D D G+N K+ YS+ G+F+ID
Sbjct: 3127 NPPVFSSEHYNACVYENTATKALLTRVQAVDPD-VGINRKVVYSL-ADSADGFFSIDGSS 3184
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ I++ + LDRE P YN++++A D+
Sbjct: 3185 GI--------------------IILEQPLDREQQP-SYNISVQATDQS 3211
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y A E+ P +++ ++A DAD G N I YS+ G +F
Sbjct: 3025 NSPVCDQVAYTALFPEDIPSNKIILKVRAKDAD-IGSNGDIRYSLYGSGNNEFF------ 3077
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+DP + + + L LLDRE P+ YNL RA D G
Sbjct: 3078 -----------LDPESGE----LKTLALLDRERVPV-YNLIARATDGG 3109
Score = 41.6 bits (96), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 25/109 (22%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI ++A D D PG +I+Y++ F ID+ G
Sbjct: 2493 SPAFSQSTYVAEVRENAAAGTKVIHVRATDGD-PGTYGQITYAIINDFAKDRFLIDSNG- 2550
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLT--LRAVDKG 109
++ + LDRE PL +++ LRA+D G
Sbjct: 2551 --------------------QVITTERLDRE-NPLEGDISIFLRALDGG 2578
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 17/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ S+ +Y V EN P VI ++A D D N K++Y + G+ +F I
Sbjct: 1144 NAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSS-NEKLTYRITSGNPQNFFAINTKT 1202
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNI-VVLKLLDR 92
D E HF V T D G+ K+ I VV+++LD
Sbjct: 1203 GLITTTSRKLDREQQAEHFLEV-TVTDGGSSPKQSTIWVVVQVLDE 1247
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 16/78 (20%)
Query: 37 GMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIA 95
G N +I S S+ GD L F + EG EY I K +D E
Sbjct: 293 GANGEIESVSIVAGDPLDQFFLAKEGKW---------------MNEYKIKERKKVDWESF 337
Query: 96 PLGYNLTLRAVDKGTPPR 113
P GYNLTL+A DKG+P +
Sbjct: 338 PYGYNLTLQAKDKGSPQK 355
Score = 40.0 bits (92), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F +Y A V E+ P+GT V+ + A+D D G N I+YS+ + L +
Sbjct: 468 HTPEFQQPLYDAFVNESVPMGTSVLMVSASDKD-KGENGYITYSIASLNLLPF------- 519
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 520 AINQFTGV--------------ISTTEELDFESSPEIYRFIVRASDWGSPYRH 558
Score = 40.0 bits (92), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D S+S+ G+ F +D G
Sbjct: 3442 NSPVFTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPPFSFSILSGNEEEEFILDPHG 3501
Query: 62 PL 63
L
Sbjct: 3502 VL 3503
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 24/110 (21%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFR 67
F VKEN P+G ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 729 FPSDVAVKENLPVGANILKIKAYDAD-SGFNGKVLFTISDGNTDSCFNIDMETGQLK--- 784
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 785 ------------------VLLPMDREHTDL-YLLNITIYDLGNPQKSSWR 815
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVF+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D
Sbjct: 2390 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYSILSGNDRTSFLMD 2445
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ GT V+ + A D G N++I+Y +R G+ G F
Sbjct: 3232 NPPVFERRDYLVTVPEDTSPGTQVLAVFATSKDI-GTNAEITYQIRSGNEQGRF------ 3284
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+I+P T I V ++LD E+ Y L + A D GTP
Sbjct: 3285 ----------RINPKTG----GISVSEVLDYELCKKFY-LVVEAKDGGTP 3319
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 25/120 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVF Y A V+ + GTL+ + A D D G N +++Y ++ D G+F I+ N
Sbjct: 2080 NSPVFVGLPYYAAVQVDAEPGTLIYQVTAIDKD-KGANGEVTYVLQ--DDYGHFEINPNS 2136
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
G N+++ + + +++ + Y +T+ A D G P T P
Sbjct: 2137 G---------------------NVILKEAFNSDLSNIEYGVTILAKDGGKPSLSTSVELP 2175
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F ID
Sbjct: 933 SPAFIPSSYSVKVLEDLPVGTVIAWLETHDPD-LGLGGQVRYSLV-NDYNGRFEID---- 986
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 987 ----------------KASGAIRLSKELDYEKQQF-YNLTVRAKDKGRP 1018
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG----LGYFTI 57
N PVF Y+ + E P+GT + ++A D D G N +++YS+ + F I
Sbjct: 2810 NKPVFETSSYETIIMEGMPVGTKLTQVRAIDMD-WGANGQVTYSLHSDSQPEKVMEAFNI 2868
Query: 58 D-NEGPLNHFRIVPTKIDPG 76
D N G ++ + + + DP
Sbjct: 2869 DSNTGWISTLKDLDHETDPA 2888
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---------RGGDGL 52
N+PVF Y + E+ IGT +I ++A D D G N +++YSV G+
Sbjct: 827 NSPVFLQDSYSVNILESSSIGTEIIQVEARDKD-LGSNGEVTYSVLTDTQQFAINSSTGI 885
Query: 53 GYFT--IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLL 90
Y +D E N+ + + + ++ +++V LK+
Sbjct: 886 IYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVF 925
Score = 35.0 bits (79), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 60/119 (50%), Gaps = 9/119 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F++ +Y+A+V E+ +G+ V+ + A D D G N+++ Y++ G+ F I+
Sbjct: 1562 HSPYFTNPLYEASVFESAALGSAVLQVTALDKD-KGENAELIYTIEAGNTGNTFKIE--- 1617
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLR---AVDKGTPPRETYK 117
P+ I+ +P ++ +K+ D+ P+ +R + + P+ T+K
Sbjct: 1618 PV--LGIITVSKEPDMTTTGQFVLSVKVTDQGSPPMSATAIVRISVTMSDNSHPKFTHK 1674
>gi|432880945|ref|XP_004073728.1| PREDICTED: protocadherin Fat 2-like [Oryzias latipes]
Length = 4001
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/109 (37%), Positives = 55/109 (50%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P FS+FVY+A V E+ +G+ V+TL A+D D G + + Y + G GLG FTID E +
Sbjct: 1157 PTFSEFVYEAAVIEDAAVGSSVVTLTASDKD-LGRDGVVRYHIHDGSGLGVFTIDEESGV 1215
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I +LLDRE P Y L++ A D GT P
Sbjct: 1216 --------------------IRTSELLDRETVP-HYWLSVFATDLGTEP 1243
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P+F+ YQAT+ EN P+G+ V+ + A D+D G N ++YS+ D L
Sbjct: 588 NSPLFTQTSYQATLDENTPVGSSVVKVTAWDSD-KGKNGFVTYSIAHSDPL--------- 637
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P IDP T I+ + LD E+A Y+L + A D G+P
Sbjct: 638 --------PFTIDPFTGV----ILTSEHLDFELANRLYHLRVWASDSGSP 675
Score = 42.0 bits (97), Expect = 0.073, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++P F Y+A++ P G+ VI +KA D D G N+ ISYS+ G+ F+ID E
Sbjct: 1675 HSPAFLSPRYEASISNQAPTGSEVIRVKALDKD-TGSNADISYSLHSGNTDNIFSIDAE 1732
Score = 42.0 bits (97), Expect = 0.088, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
NAPVFS Y A + E P+ T V + A+D D G N ++Y++ G D F I+
Sbjct: 2392 NAPVFSPLTYAANIAERLPVNTSVTRVSASDKD-SGRNKDLTYAIVTTGEDDADSFEINQ 2450
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ L IV K+LD E + L +RA D G+ P
Sbjct: 2451 KTGL--------------------IVTRKVLDYE-ERKQFKLKVRATDNGSVP 2482
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P+FS Y TV +N + T V + A D D G+NS++ YS+ GD GYF++D
Sbjct: 3238 NQPLFSASHYMVTVFDNTTVRTPVAVIYAKDPD-AGINSEVRYSLIAGDA-GYFSLD 3292
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 22/93 (23%)
Query: 20 PIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKK 79
P +L + + A D D P +N+ + YS+ GD L F+ID+
Sbjct: 3556 PPISLPVHVTATDQDGP-INNLLRYSIVSGDPLQQFSIDH-------------------- 3594
Query: 80 KEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I V LDRE P Y+LT++A D+G+PP
Sbjct: 3595 RSGEITVRTALDREQTP-HYSLTVQAADEGSPP 3626
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 37/79 (46%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS+ VY+ +V EN ++++ DAD N ++ + GD LG F I E
Sbjct: 3030 NPPTFSEEVYRGSVVENITPFEPIVSMTTFDADVALQNRLVTCYITDGDPLGQFAIIQED 3089
Query: 62 PLNHFRIVPTKIDPGTKKK 80
IV +D TK +
Sbjct: 3090 ENQWGLIVKESLDRETKDR 3108
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ V E+ P+GT+++ +++ D D G +SY+++ + G F
Sbjct: 1048 NPPRFVPPGYRIKVAEDVPVGTILLWVESIDLD-LGRAGLVSYNLKSTES-GIFN----- 1100
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + + + LD E P+ YNLT+RAVD G P
Sbjct: 1101 -----------IEPSTGA----LTLERELDFERRPM-YNLTVRAVDHGLP 1134
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 22/110 (20%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
V EN P+ + ++ KAAD D G N ++ +++ G+ G F ID R+V +
Sbjct: 851 VVENHPLNSTILQFKAADGD-SGFNGQVVFALSSGNEDGCFCIDTFS--GELRLVCS--- 904
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPRNGL 124
LDRE Y L + A D G P R +K N L
Sbjct: 905 ---------------LDRESKEF-YILNITAYDLGMPQRSVWKLMAVNIL 938
>gi|229442265|gb|AAI72775.1| FAT tumor suppressor 2 precursor [synthetic construct]
Length = 1343
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ FV+Q V+EN P GT VI + A D D G++ ++ Y +R G GL F+I+ +
Sbjct: 1027 LHPPHFASFVHQGQVQENSPSGTQVIVVAAQD-DDSGLDGELQYFLRAGTGLAAFSINQD 1085
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I L LDRE A Y LT+ AVD+G+ P
Sbjct: 1086 TGM--------------------IQTLAPLDREFASY-YWLTVLAVDRGSVP 1116
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP+F+ Y T+ EN P GT V+ + A D D G N ++YS+ G L
Sbjct: 454 HAPLFNRSSYDGTLDENIPPGTSVLAVTATDRD-HGENGYVTYSIAGPKAL--------- 503
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P IDP I K +D E+ Y +RA D G+P R
Sbjct: 504 --------PFSIDPYLGI----ISTSKPMDYELMKRIYTFRVRASDWGSPFR 543
Score = 38.9 bits (89), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P S V+ +++E+ P+GT V+ L A D D K+++++ G+ +G+F I
Sbjct: 1133 NPPQMSQAVFYPSIQEDAPVGTSVLQLDAWDPDSSS-KGKLTFNITSGNYMGFFMIH--- 1188
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLD 91
P+ ++D + K+ +I+ + +LD
Sbjct: 1189 PVTGLLSTAQQLD--RENKDEHILEVTVLD 1216
>gi|114602953|ref|XP_001168406.1| PREDICTED: protocadherin Fat 2 [Pan troglodytes]
Length = 4349
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ FV+Q V+EN P GT VI + A D D G++ ++ Y +R G GL F+I+ +
Sbjct: 1027 LHPPHFASFVHQGQVQENSPSGTQVIVVAAQD-DDSGLDGELRYFLRAGTGLAAFSINQD 1085
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I L LDRE A Y LT+ AVD+G+ P
Sbjct: 1086 TGM--------------------IQTLAPLDREFASY-YWLTVLAVDRGSVP 1116
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 54/109 (49%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y V EN +G +++T+ A D D P +NS I+YS+ GG+ LG+FTI
Sbjct: 3319 PQFPQDPYSTRVLENVLVGDVILTVSATDEDGP-LNSDITYSLIGGNQLGHFTI------ 3371
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+ + V K LDRE A Y+L LRA D G PP
Sbjct: 3372 --------------HPKKGELQVAKALDREQAS-SYSLKLRATDSGQPP 3405
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 40/92 (43%), Gaps = 18/92 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y+ +V EN G LV TLK DAD N +++ + GD LG F I G
Sbjct: 2902 NAPRFASEEYRGSVVENSEPGELVATLKTLDADISEQNRQVTCYITEGDPLGQFGISQVG 2961
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
E+ I K LDRE
Sbjct: 2962 ------------------DEWRISSRKTLDRE 2975
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P FS VY ++ E P T VI L A+D D G N +SY + G D +F I+
Sbjct: 2268 NPPTFSQLVYTTSISEGLPAQTPVIQLLASDQD-SGRNRDVSYQIVEDGSDVSKFFQIN- 2325
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G+ + + ++ LD E A +++ +RA+DKG PP
Sbjct: 2326 ----------------GSTGE---MSTVQELDYE-AQQHFHVKVRAMDKGDPP 2358
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++ P F+ Y+A+V + GT ++ ++A DAD G+N+++ YS+ G+ G+F I+
Sbjct: 1550 LHPPRFTQLHYEASVADTIAPGTELLQVRAMDAD-RGVNAEVHYSLLKGNSEGFFNIN 1606
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P S V+ +++E+ P+GT V+ L A D D K+++++ G+ +G+F I
Sbjct: 1133 NPPQMSQAVFYPSIQEDAPVGTSVLQLDAWDPDSSS-KGKLTFNITSGNHMGFFMIH--- 1188
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLD 91
P+ ++D + K+ +I+ + +LD
Sbjct: 1189 PVTGLLSTAQQLD--RENKDEHILEVTVLD 1216
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 47/112 (41%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP+F+ Y T+ EN P GT V+ + A D D G N + YS+ G L
Sbjct: 454 HAPLFNRSSYDGTLDENIPPGTSVLAVTATDRD-HGENGYVIYSIAGPKAL--------- 503
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P IDP I K +D E+ Y +RA D G+P R
Sbjct: 504 --------PFSIDPYLGI----ISTSKPMDYELMKRIYTFRVRASDWGSPFR 543
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 46/111 (41%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y TV+EN PIG+ V+ L +D D P S+ + G N G
Sbjct: 3422 NPPRFFQLNYSTTVQENSPIGSKVLQLILSDPDSPENGPPYSFRITKG---------NNG 3472
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ FR+ P +V + L R A Y L ++A D G PP
Sbjct: 3473 --SAFRVTPDGW----------LVTAEGLSRR-AQEWYQLQIQASDSGIPP 3510
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR---GGDGLGYFTID 58
N PVF Y+A + EN P+GT VI + A D D G + ++SY + G + F ID
Sbjct: 2793 NRPVFEADPYKAVLTENMPVGTSVIQVTAIDKD-TGRDGQVSYRLSADPGSNVHELFAID 2851
Query: 59 NEG 61
+E
Sbjct: 2852 SES 2854
>gi|351696801|gb|EHA99719.1| Protocadherin Fat 1 [Heterocephalus glaber]
Length = 4589
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 58/116 (50%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVFS FV + VKE+ PIG+ ++T+ A D D G + +I YS+R G G+G F ID E
Sbjct: 1030 LHPPVFSSFVEKGVVKEDVPIGSSIMTVSAHDED-TGRDGEIQYSIRDGSGVGVFKIDEE 1088
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ + LLDRE + Y LT+ A D+ P ++
Sbjct: 1089 TGV--------------------LETSDLLDRE-SMSHYWLTVYAADRAVVPLSSF 1123
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 55/112 (49%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS Y A + E+ + VIT+ A DAD P NS I YS+ G+ FTID
Sbjct: 3332 NTPSFSQDTYMAVISEDAVLEQSVITVLADDADGPS-NSLIHYSIIEGNQGSPFTID--- 3387
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P K + + V KLLDRE GY LT++A D G+PPR
Sbjct: 3388 --------PVKGE---------VKVTKLLDRETIS-GYTLTIQASDNGSPPR 3421
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N +++Y + GGD LG F ++N
Sbjct: 2917 PRFTAEIYKGTVSEDDPPGGVIAILSTTDADSEEINKQVTYFITGGDTLGQFAVEN---- 2972
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE Y LT+ A D
Sbjct: 2973 --------------IQNEWKVYVKKPLDREKKD-SYLLTITATD 3001
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 55/112 (49%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y TV EN GTL+ ++A DAD G+N KISYS+ G F+I+
Sbjct: 3122 NAPQFTADPYTVTVFENTEPGTLLTRVQATDAD-TGLNRKISYSLIDSAN-GQFSINEIS 3179
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I + K LDRE+ + Y L L+AVD+G P +
Sbjct: 3180 GI--------------------IQLEKPLDRELQAV-YTLVLKAVDQGLPRK 3210
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ IGT V+ + AA D N++I+YS+ G+ G F+ID+
Sbjct: 3227 NPPVFEYREYGATVSEDILIGTEVLQVYAASRDIEA-NAEITYSIINGNEHGKFSIDS-- 3283
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I +++ LD E A Y LT+ A D GTP
Sbjct: 3284 ------------------KTGAIFIIENLDYESAH-EYYLTVEATDGGTP 3314
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
L FR V + PG+K EY + + +D + P GYNLTL+A DKGTPP+
Sbjct: 301 LQQFRTVRSF--PGSK--EYKVKAISSIDWDSHPFGYNLTLQAKDKGTPPQ 347
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKEN+P+G+ +I + + D D G N K+ YS+ GG+ F ID +D
Sbjct: 727 VKENRPVGSNIIFMNSTDLD-SGFNGKLIYSISGGNEDSCFIID--------------MD 771
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
G K +L LDRE Y L + D G P + ++
Sbjct: 772 TGMLK------ILSPLDRETTD-KYTLNITVYDLGIPQKAAWR 807
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 49/112 (43%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A+ EN IGT V+ + A D D G N ++YS I N
Sbjct: 460 NPPEFTQTAYKASFDENASIGTTVLRVSAVDPD-DGENGYVTYS-----------IANIN 507
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P VP ID T + + LD E+ P Y L +RA D G P R
Sbjct: 508 P------VPFVIDHFTGA----VSTSENLDYELMPRVYTLRIRASDWGLPYR 549
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ G++V+ + A D D G N+++ YS+ G+ FTID
Sbjct: 1559 HAPWFTSSSYEGRVYESAAAGSVVLQVTALDKD-KGKNAEVLYSIESGNIGNSFTID--- 1614
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+ G+ K K LDR Y+L ++A DKG PP
Sbjct: 1615 PI-----------LGSIK------TAKELDRSNQE-EYDLMVKATDKGNPP 1647
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 23/101 (22%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
Y+ V+E+ P GT+++ L+A D D G +S++ YS+ G G F +D
Sbjct: 933 YRVKVREDLPEGTIIVWLEAHDPD-LGQSSQVRYSLL-DHGEGIFDVD------------ 978
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT+RA DKG P
Sbjct: 979 --------KLSGAVRIIQQLDFERKQV-YNLTVRAKDKGKP 1010
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 55/114 (48%), Gaps = 10/114 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y ++EN+P+G V+ L D D +S+ G+ F ++ +G
Sbjct: 3437 NAPVFSKGNYSVIIQENKPVGFSVLQLVVTDKDSSHNGPPFFFSIVSGNDDRAFEVNQQG 3496
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR---EIAPLGYNLTLRAVDKGTPP 112
L + K+ KE+ ++ +K+ D +++ L + + +R +++ P
Sbjct: 3497 VLLTSATIQRKV------KEHYLLHVKVADNGKPQLSSLTH-IDIRVIEESIHP 3543
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 20/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y AT+ E IGT V+ ++A D+D N ISY + G ++
Sbjct: 2280 NPPVFVQQSYSATLSEASVIGTSVVKVRATDSDSEP-NRGISYQMFG---------NHSK 2329
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+HF ID T I +L+ LD E + + +RA+D G PP
Sbjct: 2330 SQDHFH-----IDGSTGL----ISLLRTLDYE-QFQQHKIFVRAIDGGMPP 2370
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P+F +Y+A + E+ G V+ +KA DAD ++ ++ YS+ G+ F I++E
Sbjct: 2387 NPPLFDQQIYEAKISEHATHGHFVMCVKAYDADSSDID-RLEYSILSGNDHKNFVINSE 2444
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
+++PVF Y+ + EN PI TLVI +KA D D G+ I+YS+
Sbjct: 2488 LHSPVFPQNEYEVELAENAPIHTLVIEVKATDKD-SGIYGHITYSI 2532
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTID 58
N PVF Y+A + EN P G+ VI ++A+D D GMN + YS+ + D + F I+
Sbjct: 2806 NTPVFESNPYEAFIVENLPGGSRVIQVRASDLD-SGMNGHVMYSLDQSQSVDIIESFAIN 2864
Query: 59 NE 60
E
Sbjct: 2865 ME 2866
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 49/114 (42%), Gaps = 21/114 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S+ VY + EN P V+ ++A D D N K+ Y + G+ G+F+I +
Sbjct: 1136 NAPQTSEPVYYPEIMENSPKDISVVQIEAFDPDSSS-NDKLMYKITSGNPQGFFSIHPKT 1194
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
L I T + LDRE + L + D GTPP+ T
Sbjct: 1195 GL----ITTTS---------------RRLDREQQD-EHILEVTVTDNGTPPKST 1228
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV +Y T+ E+ G L++ + A DAD N++I+Y++ G +
Sbjct: 3020 NSPVCEKTLYSDTIPEDALPGKLIVQVSATDADIRS-NAEITYTLFGSGAEKF------- 3071
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
K++P T + + L LDRE + YNL +RA D G
Sbjct: 3072 ----------KVNPDTGE----LKTLAPLDREEQAV-YNLLVRATDGG 3104
>gi|344287782|ref|XP_003415631.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 3-like [Loxodonta
africana]
Length = 4556
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F ID+E
Sbjct: 1037 LHTPYFPDFAVVGSVKENSRIGTSVLQVTAHDED-SGRDGEIQYSIRDGSGLGRFNIDDE 1095
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I +LDRE Y LT+ A D+G P
Sbjct: 1096 SGV--------------------ITTADILDRETMG-SYWLTVYATDRGVVP 1126
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 2919 NAPVFAHEVYRGNVKESDPPGEVVAVLSTWDRDTSDINRQVSYHITGGNPRGRFAL---- 2974
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 2975 --------------GLVQNEWKVYVKRPLDREEQDI-YFLNITATD 3005
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F +Y+A V E+ P+GT V+T+ A+D D G N I+YS+ + L +
Sbjct: 467 HTPEFQQPLYEAFVNESVPVGTSVLTVSASDKD-KGENGYITYSIASLNLLPF------- 518
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 519 AINQFTGV--------------ISTTEELDFESSPETYRFIVRASDWGSPYRH 557
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS +Y A + E+ +G VI L A D D N +I +S+ GD DNE
Sbjct: 3336 NPPKFSQDIYSAVISEDALVGDSVILLIAEDVDSQP-NGQIQFSIVNGDR------DNE- 3387
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
F + P KKK LDRE GY+L ++AVD G P
Sbjct: 3388 ----FAVEPVLGLVKVKKK---------LDRERVS-GYSLLVQAVDSGIP 3423
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS +Y A V+EN GT VI ++A D D PG +ISY++ F ID+ G
Sbjct: 2492 SPAFSQSMYVAEVRENAAAGTKVIHVRATDGD-PGTYGQISYAIINDFAKDRFLIDSNGQ 2550
Query: 63 L 63
+
Sbjct: 2551 V 2551
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 17/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ S+ ++ V EN P VI ++A D D N K++Y + G+ +F I
Sbjct: 1143 NAPLTSEPIFYPVVMENSPKDVSVIQIQAEDPDSSS-NEKLTYRITSGNPQNFFAINIKT 1201
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNI-VVLKLLDR 92
D E HF V T D G+ K+ I VV+++LD
Sbjct: 1202 GLIMTTSRKLDREQQAEHFLEV-TVTDGGSSPKQSTIWVVVQVLDE 1246
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y A ++EN+P+GT ++ L D D S+S+ G+ F +D G
Sbjct: 3441 NGPVFTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPPFSFSILSGNEEEEFVLDPHG 3500
Query: 62 PL 63
L
Sbjct: 3501 VL 3502
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 45/104 (43%), Gaps = 16/104 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN-- 59
N PVFS Y A V EN L+ ++A D D G+N K+ YS+ G+F+ID
Sbjct: 3126 NPPVFSSDHYNACVYENTATKALLTRVQAVDPD-VGINRKVVYSL-ADSADGFFSIDGLS 3183
Query: 60 -----EGPLNH-------FRIVPTKIDPGTKKKEYNIVVLKLLD 91
E PL+ + T PG + V + +LD
Sbjct: 3184 GIIILEQPLDRELQSSYSISVQATDQSPGQALSSFTTVTITVLD 3227
Score = 38.9 bits (89), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 47/108 (43%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y A E+ P +++ + A DAD G N I YS+ G +F
Sbjct: 3024 NSPVCDQVAYTALFPEDIPSNKIILKVSAKDAD-IGSNGDIRYSLYGSGNNEFF------ 3076
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+DP + + + L LLDRE P+ Y+L RA D G
Sbjct: 3077 -----------LDPESGE----LKTLALLDRERVPV-YSLIARATDGG 3108
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D++
Sbjct: 2389 NPPIFNQLIYESYVSELAPRGHFVTRVQASDADSSDFD-RLEYSILSGNDRTSFLMDSKS 2447
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 24/110 (21%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFR 67
F VKE+ P+G ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 728 FPSDVAVKEDLPVGANILKIKAYDAD-SGFNGKVLFTISDGNTDSCFNIDMETGQLK--- 783
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 784 ------------------VLMPMDREQTDL-YLLNITIYDLGNPQKSSWR 814
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 16/78 (20%)
Query: 37 GMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIA 95
G N +I + S+ GD L F + EG EY I K +D +
Sbjct: 292 GANGEIETLSIVAGDPLDQFFLAKEGKW---------------LNEYKIQERKQIDWQSF 336
Query: 96 PLGYNLTLRAVDKGTPPR 113
P GYNLTL+A DKG+P +
Sbjct: 337 PYGYNLTLQAKDKGSPQK 354
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ GT V+T+ A D G N++I+Y +R G+ G F
Sbjct: 3231 NPPVFERRDYLVTVPEDTSPGTQVLTVFATSKD-IGTNAEITYLIRSGNEQGKF------ 3283
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+I+P T I V ++LD E+ Y L + A D G P
Sbjct: 3284 ----------RINPKTG----GISVSEVLDYELCKKFY-LVVEAKDGGIP 3318
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F ID
Sbjct: 932 SPAFIPSSYSVKVLEDLPVGTVIAWLETHDPD-LGLGGQVRYSLV-NDYNGRFEID---- 985
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 986 ----------------KASGAIRLSKELDYEKQQF-YNLTVRAKDKGRP 1017
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG----LGYFTI 57
N PVF Y+ + E P+GT + ++A D D G N +++YS++ + F I
Sbjct: 2809 NKPVFDTSSYETIIMEGMPVGTKLTQVRALDMD-WGANGQVTYSLQSDSQPEKVMEAFNI 2867
Query: 58 D-NEGPLNHFRIVPTKIDP 75
D N G ++ + + + DP
Sbjct: 2868 DTNTGWISTLKDLDHETDP 2886
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 25/111 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVF Y A V+ + GTL+ + A D D G N +++Y ++ D G+F I+ N
Sbjct: 2079 NSPVFVGLPYYAAVQVDAEPGTLIYQVTAIDKD-KGANGEVTYILQ--DDYGHFEINPNS 2135
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
G N+++ + + +++ + Y +T+ A D G P
Sbjct: 2136 G---------------------NVILKEAFNSDLSNIEYGVTILARDGGKP 2165
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 56/111 (50%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F+ +Y+A+V E+ +G+ V+ + A D D G N+++ Y++ G N G
Sbjct: 1561 HSPYFTSPLYEASVFESAALGSAVLQVTALDKD-KGENAELIYTIEAG---------NTG 1610
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F+I P + T KE ++ + + L+++ D+G+PP
Sbjct: 1611 --NTFKIEPV-LGIITVSKEPDLTTMS---------QFVLSVKVTDQGSPP 1649
>gi|410972449|ref|XP_003992672.1| PREDICTED: protocadherin Fat 3 isoform 2 [Felis catus]
Length = 4589
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F ID+E
Sbjct: 1038 LHTPYFPDFAVVGSVKENSRIGTSVLQVAAQDEDS-GRDGEIQYSIRDGSGLGRFNIDDE 1096
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I +LDRE Y LT+ A D+G P
Sbjct: 1097 SGV--------------------ISTADILDRETTG-SYWLTVYATDRGVVP 1127
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 2920 NAPVFAHEVYRGNVKESDPPGEVVAVLSTWDRDTSDINRQVSYHITGGNPRGRFAL---- 2975
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 2976 --------------GLVQSEWKVYVKRPLDREEQDI-YFLNITATD 3006
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 52/110 (47%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS VY A + E+ +G VI L A DAD P N +I +S+ GD D+E
Sbjct: 3337 NPPRFSQDVYSAVISEDALVGDSVILLIAEDADSPP-NGQIHFSIVNGDR------DDE- 3388
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
F + P KKK LDRE GY+L ++AVD G P
Sbjct: 3389 ----FAVEPVLGLVKVKKK---------LDRERVS-GYSLLVQAVDSGIP 3424
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A V EN L+ ++A D D G+N K+ YS+ G+F+ID
Sbjct: 3127 NPPVFSSEHYNACVYENTATKALLTRVQAVDPD-VGINRKVVYSL-ADSADGFFSIDGSS 3184
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ I++ + LDRE P YN++++A D+
Sbjct: 3185 GI--------------------IILEQPLDREQQP-SYNISVQATDQS 3211
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y A E+ P +++ ++A DAD G N I YS+ G +F
Sbjct: 3025 NSPVCDQVAYTALFPEDIPSNKIILKVRAKDAD-IGSNGDIRYSLYGSGNNEFF------ 3077
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+DP + + + L LLDRE P+ YNL RA D G
Sbjct: 3078 -----------LDPESGE----LKTLALLDRERVPV-YNLIARATDGG 3109
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 25/109 (22%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI ++A D D PG +I+Y++ F ID+ G
Sbjct: 2493 SPAFSQSTYVAEVRENAAAGTKVIHVRATDGD-PGTYGQITYAIINDFAKDRFLIDSNG- 2550
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLT--LRAVDKG 109
++ + LDRE PL +++ LRA+D G
Sbjct: 2551 --------------------QVITTERLDRE-NPLEGDISIFLRALDGG 2578
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 17/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ S+ +Y V EN P VI ++A D D N K++Y + G+ +F I
Sbjct: 1144 NAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSS-NEKLTYRITSGNPQNFFAINTKT 1202
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNI-VVLKLLDR 92
D E HF V T D G+ K+ I VV+++LD
Sbjct: 1203 GLITTTSRKLDREQQAEHFLEV-TVTDGGSSPKQSTIWVVVQVLDE 1247
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 16/78 (20%)
Query: 37 GMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIA 95
G N +I S S+ GD L F + EG EY I K +D E
Sbjct: 293 GANGEIESVSIVAGDPLDQFFLAKEGKW---------------MNEYKIKERKKVDWESF 337
Query: 96 PLGYNLTLRAVDKGTPPR 113
P GYNLTL+A DKG+P +
Sbjct: 338 PYGYNLTLQAKDKGSPQK 355
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D S+S+ G+ F +D G
Sbjct: 3442 NSPVFTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPPFSFSILSGNEEEEFILDPHG 3501
Query: 62 PL 63
L
Sbjct: 3502 VL 3503
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F +Y A V E+ P+GT V+ + A+D D G N I+YS+ + L +
Sbjct: 468 HTPEFQQPLYDAFVNESVPMGTSVLMVSASDKD-KGENGYITYSIASLNLLPF------- 519
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 520 AINQFTGV--------------ISTTEELDFESSPEIYRFIVRASDWGSPYRH 558
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 24/110 (21%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFR 67
F VKEN P+G ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 729 FPSDVAVKENLPVGANILKIKAYDAD-SGFNGKVLFTISDGNTDSCFNIDMETGQLK--- 784
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 785 ------------------VLLPMDREHTDL-YLLNITIYDLGNPQKSSWR 815
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVF+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D
Sbjct: 2390 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYSILSGNDRTSFLMD 2445
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ GT V+ + A D G N++I+Y +R G+ G F
Sbjct: 3232 NPPVFERRDYLVTVPEDTSPGTQVLAVFATSKDI-GTNAEITYQIRSGNEQGRF------ 3284
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+I+P T I V ++LD E+ Y L + A D GTP
Sbjct: 3285 ----------RINPKTG----GISVSEVLDYELCKKFY-LVVEAKDGGTP 3319
Score = 37.4 bits (85), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 25/120 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVF Y A V+ + GTL+ + A D D G N +++Y ++ D G+F I+ N
Sbjct: 2080 NSPVFVGLPYYAAVQVDAEPGTLIYQVTAIDKD-KGANGEVTYVLQ--DDYGHFEINPNS 2136
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
G N+++ + + +++ + Y +T+ A D G P T P
Sbjct: 2137 G---------------------NVILKEAFNSDLSNIEYGVTILAKDGGKPSLSTSVELP 2175
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F ID
Sbjct: 933 SPAFIPSSYSVKVLEDLPVGTVIAWLETHDPD-LGLGGQVRYSLV-NDYNGRFEID---- 986
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 987 ----------------KASGAIRLSKELDYEKQQF-YNLTVRAKDKGRP 1018
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG----LGYFTI 57
N PVF Y+ + E P+GT + ++A D D G N +++YS+ + F I
Sbjct: 2810 NKPVFETSSYETIIMEGMPVGTKLTQVRAIDMD-WGANGQVTYSLHSDSQPEKVMEAFNI 2868
Query: 58 D-NEGPLNHFRIVPTKIDPG 76
D N G ++ + + + DP
Sbjct: 2869 DSNTGWISTLKDLDHETDPA 2888
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---------RGGDGL 52
N+PVF Y + E+ IGT +I ++A D D G N +++YSV G+
Sbjct: 827 NSPVFLQDSYSVNILESSSIGTEIIQVEARDKD-LGSNGEVTYSVLTDTQQFAINSSTGI 885
Query: 53 GYFT--IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLL 90
Y +D E N+ + + + ++ +++V LK+
Sbjct: 886 IYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVF 925
Score = 35.0 bits (79), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 60/119 (50%), Gaps = 9/119 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F++ +Y+A+V E+ +G+ V+ + A D D G N+++ Y++ G+ F I+
Sbjct: 1562 HSPYFTNPLYEASVFESAALGSAVLQVTALDKD-KGENAELIYTIEAGNTGNTFKIE--- 1617
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLR---AVDKGTPPRETYK 117
P+ I+ +P ++ +K+ D+ P+ +R + + P+ T+K
Sbjct: 1618 PV--LGIITVSKEPDMTTTGQFVLSVKVTDQGSPPMSATAIVRISVTMSDNSHPKFTHK 1674
>gi|47227101|emb|CAG00463.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1078
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 56/110 (50%), Gaps = 22/110 (20%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP F+DF + TVKEN +GT V+T+ A D D G + + YS++GG+GLG FTID
Sbjct: 769 APYFNDFAVRGTVKENSRVGTSVLTVSAKD-DDKGRDGVLRYSIKGGNGLGTFTIDE--- 824
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
D G I +LD E + Y LT+ A D+G P
Sbjct: 825 -----------DTGV------IYTAGILDCE-SKDAYWLTVYATDRGVTP 856
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 50/112 (44%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVFS Y ++ E+ P+GT+V+ A D D +G +G TI E
Sbjct: 278 NSPVFSKPFYDISINESLPLGTVVLVASAVDDD------------KGENGFVTHTIAGEM 325
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
L P ID T + I V + LD E + Y+ +RA D G P R
Sbjct: 326 SL------PFSIDQNTGE----IRVTQDLDFESSDDIYSFAVRASDWGAPYR 367
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 22/116 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F V+E+ P+G V ++A D D G N ++ +S+ G+ L F I+ E
Sbjct: 531 HAPQFEALPTSILVREDLPVGASVFQVRARDGD-TGFNGRVLFSISDGNKLNSFNINTEN 589
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
L I V + LDRE Y L + D+G P +++
Sbjct: 590 GL--------------------ITVFQQLDRENLD-RYFLNITIYDQGVPQMSSWR 624
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 54/136 (39%), Gaps = 19/136 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ SD +Y V EN P VI ++A D D S++SY + G+ +F I
Sbjct: 873 NAPLTSDPIYHPVVMENSPKDVSVIRIQAQDPDLTSTPSRLSYRITAGNPQNFFAINPRT 932
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAP-----LGYNLT 102
D E HF V P T ++ V++ + D P + Y ++
Sbjct: 933 GLITTTTRKLDREQQSEHFLEVTVIDGPVTTRQSTVWVMVHVEDENDNPPTFPEVTYRIS 992
Query: 103 LRAVDKGTPPRETYKA 118
L D+ Y+
Sbjct: 993 LTERDRNKRGEPVYRV 1008
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 81 EYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
EY + L+D E P G NLT +A D+G PPR
Sbjct: 136 EYRVKTSDLVDWEAFPYGCNLTFQAKDRGIPPR 168
>gi|395817724|ref|XP_003782306.1| PREDICTED: protocadherin Fat 2 [Otolemur garnettii]
Length = 4316
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ FV+Q V+EN P GT V+ + A D D G++ ++ Y +R G GL F+I+ +
Sbjct: 1026 LHPPRFASFVHQGQVQENSPSGTQVVVVAAHD-DDSGLDGEVQYFLRAGTGLAAFSINQD 1084
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I L LDRE A Y LT+ AVD+G+ P
Sbjct: 1085 TGM--------------------IQTLAPLDREFASY-YWLTVLAVDRGSVP 1115
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 53/111 (47%), Gaps = 22/111 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F +Y V EN +G +++T+ A D D P NS I+YS+ GG+ LG+FTI
Sbjct: 3320 PRFLQGLYSTRVLENAILGDVILTVSATDEDGP-QNSAITYSLVGGNQLGHFTI------ 3372
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
K+ + V K LD E Y+L LRA D G PPR
Sbjct: 3373 --------------HPKKGELQVAKALDWEQTS-SYSLRLRATDSGQPPRH 3408
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 49/112 (43%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP+F+ Y T+ EN P GT V+T+ A D D G N I+YS+
Sbjct: 453 HAPIFNRSSYDGTLDENIPPGTSVLTVAATDRD-HGENGFITYSIAAP------------ 499
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ VP IDP I K +D E+ Y +RA D G+P R
Sbjct: 500 -----KAVPFSIDPYLGI----ISTSKPMDYELMRRIYTFRVRASDWGSPFR 542
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 18/92 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+ +V EN G V+TLK DAD N +++ + GD LG F I G
Sbjct: 2903 NPPRFASENYKGSVVENSEPGEPVVTLKTLDADISEQNRQVTCYITEGDPLGQFGISQVG 2962
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
E+ I K LDRE
Sbjct: 2963 ------------------DEWRISSRKTLDRE 2976
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N P S V+ +V E+ P+GT V+ L A D D K+++++ G+ +G+FTI
Sbjct: 1132 NPPQMSRAVFYPSVWEDVPVGTSVLQLDAWDPDSSS-KGKLTFNITSGNHMGFFTI 1186
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P F VY ++ E P T VI L A+D D G N +SY + G D +F I+
Sbjct: 2267 NPPTFPQLVYTTSISEGLPAQTPVIQLLASDQD-SGKNRDVSYQIVEDGSDVSKFFQIN- 2324
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G+ + + ++ LD E A +++ +RA+DKG PP
Sbjct: 2325 ----------------GSTGE---MSTVQELDYE-AQQHFHVKVRAMDKGDPP 2357
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 42/111 (37%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y TV+E PIG V+ L +D D P + S+ + G+ F + +G
Sbjct: 3423 NPPRFFQLNYSTTVQEYSPIGNKVLQLILSDPDSPENGAPYSFRITKGNNGSAFRVTPDG 3482
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L V K L R + Y L + A D G PP
Sbjct: 3483 WL---------------------VTAKSLSRRVQEW-YQLQIEATDSGVPP 3511
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR---GGDGLGYFTID 58
N PVF Y+A + EN P+GT VI A D D G + ++SY + G + F ID
Sbjct: 2794 NRPVFEADPYKAVLTENMPVGTSVIQATAIDQD-TGRDGQVSYRLSADPGSNIHELFAID 2852
Query: 59 NEG 61
+E
Sbjct: 2853 SES 2855
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ Y+A + + GT ++ ++A DAD G N+++ YS+ G+ +F I+
Sbjct: 1549 LHPPRFTQLHYEANIPDTTAPGTELLQVRALDAD-RGANAEVRYSLLKGNSEAFFNINAL 1607
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ I + + LDR + ++LT++A D+G+P
Sbjct: 1608 LGI--------------------ITLAQKLDRA-NHVQHSLTVKAEDQGSP 1637
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVF + +++++ P+G V+T+ A D D + Y + G+ L YF I+
Sbjct: 559 NQPVFEEVNCTGSIRQDWPVGKSVMTMSAIDVDEL---QNLKYEILSGNELEYFDIN 612
Score = 35.0 bits (79), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 47/117 (40%), Gaps = 23/117 (19%)
Query: 2 NAPVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+ P F D F V EN PI T + L A D D G N K+ Y + G+ G F I+ E
Sbjct: 709 HIPQFEDHFPLSIDVLENVPINTPLSRLAATDPD-AGFNGKLVYVIADGNEEGCFDIELE 767
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
L + V LD E+ Y L + D GTP + ++K
Sbjct: 768 TGL--------------------LTVASPLDYEVTNF-YILNVTVFDLGTPQKSSWK 803
>gi|345787797|ref|XP_848507.2| PREDICTED: protocadherin Fat 3 isoform 9 [Canis lupus familiaris]
Length = 4557
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F ID+E
Sbjct: 1038 LHTPYFPDFAVVGSVKENSRIGTSVLQVTAQDED-SGRDGEIQYSIRDGSGLGRFNIDDE 1096
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I +LDRE Y LT+ A D+G P
Sbjct: 1097 SGV--------------------ISTADILDRETTG-SYWLTVYATDRGVVP 1127
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 2920 NAPVFAHEVYRGNVKESDPPGEVVAVLSTWDRDTSDINRQVSYHITGGNPRGRFAL---- 2975
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 2976 --------------GLVQSEWKVYVKRPLDREEQDI-YFLNITATD 3006
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 51/110 (46%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS VY A + E+ +G VI L A DAD N +I +S+ GD DNE
Sbjct: 3337 NPPRFSQDVYSAVISEDALVGDSVILLVAEDADSQP-NGQIRFSIVNGDR------DNE- 3388
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
F + P KKK LDRE GY+L ++AVD G P
Sbjct: 3389 ----FAVEPVLGLVKVKKK---------LDRERVS-GYSLLVQAVDSGIP 3424
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 25/109 (22%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI ++A D D PG +ISY++ F IDN G
Sbjct: 2493 SPAFSQSTYVAEVRENAAAGTKVIHVRATDGD-PGAYGQISYAIINDFAKDRFLIDNNG- 2550
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLT--LRAVDKG 109
++ + LDRE PL +++ LRA+D G
Sbjct: 2551 --------------------QVITTERLDRE-NPLEGDISIFLRALDGG 2578
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 17/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ S+ +Y V EN P VI ++A D D N K++Y + G+ +F I
Sbjct: 1144 NAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSS-NEKLTYRITSGNPQNFFAINTKT 1202
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNI-VVLKLLDR 92
D E HF V T D G+ K+ I VV+++LD
Sbjct: 1203 GLITTTSRKLDREQQAEHFLEV-TVTDGGSSPKQSTIWVVVQVLDE 1247
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 16/78 (20%)
Query: 37 GMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIA 95
G N +I S S+ GD L F + EG EY I K +D E
Sbjct: 293 GANGEIESISIVAGDPLDQFFLAKEGKW---------------MNEYKIKERKRVDWESF 337
Query: 96 PLGYNLTLRAVDKGTPPR 113
P GYNLTL+A DKG+P +
Sbjct: 338 PYGYNLTLQAKDKGSPQK 355
Score = 40.0 bits (92), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D S+S+ G+ F +D G
Sbjct: 3442 NSPVFTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPPFSFSILSGNEEEEFVLDPHG 3501
Query: 62 PL 63
L
Sbjct: 3502 IL 3503
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PV Y A E+ P +++ + A DAD G N I YS+ G +F
Sbjct: 3025 NNPVCDQVAYTALFPEDIPSNKIILKVSAKDAD-IGSNGDIRYSLYGSGNAEFF------ 3077
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+DP + + + L LLDRE P+ Y+L RA D G
Sbjct: 3078 -----------LDPESGE----LKTLALLDRERVPM-YSLIARATDGG 3109
Score = 38.9 bits (89), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D++
Sbjct: 2390 NPPIFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYSILSGNDRTSFLMDSKS 2448
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 24/110 (21%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFR 67
F VKEN P+G ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 729 FPSDVAVKENLPVGANILKIKAYDAD-TGFNGKVLFTISDGNTDSCFNIDMETGQLK--- 784
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 785 ------------------VLLPMDREHTDL-YLLNITIYDLGDPQKSSWR 815
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F +Y V E+ P+GT V+ + A+D D G N I+YS+ + L +
Sbjct: 468 HTPEFQQPLYDVFVNESVPVGTNVLMVSASDKD-KGENGYITYSIASLNLLPF------- 519
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 520 AINQFTGV--------------ISTTEELDFESSPEIYRFIVRASDWGSPYRH 558
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 25/120 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVF Y A V+ + GTL+ + A D D G N +++Y ++ D G+F I+ N
Sbjct: 2080 NSPVFVGLPYYAAVQVDAEPGTLIYQVTAIDKD-KGANGEVTYVLQ--DDYGHFEINPNS 2136
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
G N+++ + + +++ + Y +T+ A D G P T P
Sbjct: 2137 G---------------------NVILKEAFNSDLSNIEYGVTVLAKDGGKPSLSTSVELP 2175
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG----LGYFTI 57
N PVF Y+ + E PIGT + ++A D D G N +++YS+ + F I
Sbjct: 2810 NKPVFETSSYETIIMEGMPIGTKLTQVRAIDMD-WGANGQVTYSLHSDSQPEKVMEAFNI 2868
Query: 58 D-NEGPLNHFRIVPTKIDP 75
D N G ++ + + + DP
Sbjct: 2869 DSNTGWISTLKDLDHETDP 2887
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F ID
Sbjct: 933 SPAFIPSSYSVKVLEDLPVGTVIAWLETHDPD-LGLGGQVRYSLV-NDYNGRFEID---- 986
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 987 ----------------KASGAIRLSKELDYEKQQF-YNLTVRAKDKGRP 1018
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---------RGGDGL 52
N+PVF Y + E+ IGT +I ++A D D G N +++YSV G+
Sbjct: 827 NSPVFLQDSYSVNILESSSIGTEIIQVEARDKD-LGSNGEVTYSVLTDTQQFAINSSTGI 885
Query: 53 GYFT--IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLL 90
Y +D E N+ + + + ++ +++V LK+
Sbjct: 886 VYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVF 925
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ GT V+ + A D G N++I+Y +R G+ G F
Sbjct: 3232 NPPVFERRDYLVTVPEDTSPGTQVLAVFATSKDI-GTNAEITYLIRSGNEQGRF------ 3284
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+I+P T I V + LD E+ Y L + A D GTP
Sbjct: 3285 ----------RINPKTG----GISVSEGLDYELCKKFY-LVVEAKDGGTP 3319
Score = 35.4 bits (80), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F++ +Y+A+V E+ +G+ V+ + A D D G N+++ Y++ G N G
Sbjct: 1562 HSPYFTNPLYEASVFESAALGSAVLQVTALDKD-KGENAELIYTIEAG---------NTG 1611
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F+I P + T KE ++ + + L+++ D+G+PP
Sbjct: 1612 --NTFKIEPV-LGIITVSKEPDMTTMG---------QFVLSVKVTDQGSPP 1650
>gi|426256282|ref|XP_004021770.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Ovis aries]
Length = 4588
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 56/112 (50%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A V E+ + VIT+ A DAD P NS I Y++ G N+G
Sbjct: 3331 NTPVFSQDTYTAVVSEDAVLEQSVITVMADDADGPS-NSHIHYAIIDG---------NQG 3380
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P IDP + + V KLLDRE GY LT++A D G+PPR
Sbjct: 3381 S-------PFTIDPARGE----VKVTKLLDRETIS-GYTLTVQASDNGSPPR 3420
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVF FV + VKEN P+G+ V+ + A D D G + +I YS+R G G+G F ID E
Sbjct: 1029 LHPPVFPSFVEKGAVKENAPVGSSVMKVSARDED-TGRDGEIHYSIRDGSGVGVFRIDEE 1087
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE + Y LT+ A D+G P ++
Sbjct: 1088 TGV--------------------IETSDRLDRE-STSHYWLTVYASDQGVVPLSSF 1122
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 58/118 (49%), Gaps = 23/118 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS Y TV EN GTL+ ++A DAD G+N KISYS+ G F+I+
Sbjct: 3121 NAPEFSADPYTITVFENTEPGTLLTRVQATDAD-AGLNRKISYSLLNS-ADGQFSINELS 3178
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I + K LDRE+ + Y LTL+AVD G P R T +T
Sbjct: 3179 GI--------------------IQLEKPLDRELQAV-YTLTLKAVDHGLPRRLTATST 3215
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ + DAD +N +++Y + GGD LG F I+N
Sbjct: 2916 PRFTAEIYKGTVSEDDPPGGVIAIVSTTDADSEEINRQVTYYITGGDPLGQFAIEN---- 2971
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE Y LT+ A D
Sbjct: 2972 --------------IQNEWKVYVKKPLDREERD-NYLLTITATD 3000
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 22/110 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ Y+A+ EN PIGT V+++ A D D G N ++YS+ + + + +
Sbjct: 461 PEFTQTAYKASFDENVPIGTTVMSVSAVDPD-EGENGYVTYSIANLNHVPFV-------I 512
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
NHF G N LD E+ P Y L +RA D G+P R
Sbjct: 513 NHF--------TGAVSTSEN------LDYELMPRVYTLRIRASDWGSPYR 548
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 53/111 (47%), Gaps = 20/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y AT+ E IGT V+ ++A DAD N ISY + G +
Sbjct: 2279 NPPVFAQQSYAATLSEASVIGTSVVQVRATDADSEP-NRGISYHMVGNHSKSH------- 2330
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+HF ID GT I +++ LD E + +++RAVD G PP
Sbjct: 2331 --DHFH-----IDSGTGL----ISLVRTLDYE-QFRQHQISVRAVDGGMPP 2369
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ IGT V+ + AA D N++I+YS+ G+ G F+ID+
Sbjct: 3226 NPPVFEYREYGATVSEDILIGTEVLQVYAASRDIEA-NAEITYSIISGNEHGKFSIDS-- 3282
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I +++ LD E + Y LT+ A D GTP
Sbjct: 3283 ------------------KTGAIFIIENLDYE-SSHEYYLTVEATDGGTP 3313
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ +G++V+ + A D D G N+++ YS+ G+ FTID
Sbjct: 1558 HAPWFTSSSYEGRVYESAAVGSVVLQVTALDKD-KGKNAEVRYSIESGNIGNSFTID--- 1613
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+ +I + LDR + Y+L ++A DKG PP
Sbjct: 1614 PILG-----------------SIKTARELDRS-NQVAYDLMVKATDKGDPP 1646
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
L FR V + PG++ EY + + +D + P GYNLTL+A DKGTPP+
Sbjct: 300 LQQFRTV--RSSPGSR--EYKLKAVGAIDWDSHPFGYNLTLQAKDKGTPPQ 346
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKENQP+G+ ++ + A D D G N K+ Y++ GG+ F +D E + F+I
Sbjct: 726 VKENQPVGSSLLVMNATDLD-TGFNGKLVYAISGGNEDSCFMMDMETGM--FKI------ 776
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
L LDRE Y L + D G P R +
Sbjct: 777 ------------LSPLDRETTDR-YTLNITVSDLGLPQRAAWH 806
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y ++EN+P+G V+ L D D +S+ G+ G F ++ +G
Sbjct: 3436 NAPVFSRGNYSLIIQENKPVGFSVLQLVVTDRDSSHNGPPFFFSIVSGNEEGAFEVNQQG 3495
Query: 62 PL 63
L
Sbjct: 3496 AL 3497
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 23/101 (22%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
Y+ V+E+ P GT+++ L+A D D G +S++ YS+ G G F +D
Sbjct: 932 YRVKVREDLPEGTIIMWLEAHDPD-LGQSSQVRYSLL-DHGEGNFDVD------------ 977
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT+RA DKG P
Sbjct: 978 --------KLSGAVRIVQQLDFEKKQV-YNLTVRAKDKGKP 1009
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F ++ + N P GT VI + A+DAD G N+ I+Y++ D+E
Sbjct: 2592 NAPQFRATKFEVNIGSNVPKGTSVIKVLASDAD-EGSNADITYAIEA---------DSES 2641
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I TK+ L L+ E+ + +RAVD G+P RE+
Sbjct: 2642 VKENLEINRASGVITTKES------LIGLENEV----FTFFVRAVDNGSPQRES 2685
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + Y A VK + +G ++ + A D D G N ++ YS++ + +F I + G
Sbjct: 2077 NAPVFVNLPYYALVKVDAAVGQVIRHVTAVDRD-SGRNGEVHYSLK--ERHEHFQIGSSG 2133
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVL 87
++ + +P T KEY + V+
Sbjct: 2134 EIS----LKKPFEPDTLNKEYLVTVV 2155
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 21/114 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S+ VY + EN P V+ ++A D D + K++Y + G+ G+F+I+++
Sbjct: 1135 NAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSS-DDKLTYKITSGNPQGFFSINSK- 1192
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
T + T +K LDRE + L + D G+PP+ T
Sbjct: 1193 ---------TGLITTTARK---------LDREQQD-EHILEVTVTDNGSPPKST 1227
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 18/129 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTID 58
N+PV Y+A + EN P G+ VI ++A+D D G N ++ Y++ + D + F I+
Sbjct: 2805 NSPVLESSPYEAFIVENLPAGSRVIQIRASDLD-SGSNGQVMYNLDQSQSVDVIESFAIN 2863
Query: 59 NE-GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTPPR 113
E G + R + + K+ Y I V+ E L ++T+ V+ +PPR
Sbjct: 2864 METGWITTLRELDHE-----KRDSYQIKVVASDHGEKVQLSSTAIVDVTVTDVND-SPPR 2917
Query: 114 ---ETYKAT 119
E YK T
Sbjct: 2918 FTAEIYKGT 2926
>gi|6688786|emb|CAB65271.1| mouse fat 1 cadherin [Mus musculus]
Length = 4587
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 57/116 (49%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVFS FV + VKE+ P G+ V+T+ A D D G + +I YS+R G G+G F ID E
Sbjct: 1030 LHTPVFSSFVEKGVVKEDVPTGSSVMTVSAHDED-TGRDGEIRYSIRDGSGIGVFRIDEE 1088
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE + Y LT+ A D+G P ++
Sbjct: 1089 TGV--------------------IETSDRLDRE-STSHYWLTVYATDQGVVPLSSF 1123
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVFS Y V E+ + VIT+ A DAD P NS I YS+ G+ FTID
Sbjct: 3333 NSPVFSQDTYTTVVSEDAALEQPVITIMADDADGPS-NSHIHYSIIEGNQGSPFTID--- 3388
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P + + + V K LDRE GY LT++A D G PPR
Sbjct: 3389 --------PVRGE---------VKVTKPLDRETIS-GYTLTVQAADNGNPPR 3422
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N ++SY + GGD LG F ++N
Sbjct: 2918 PRFTAEIYKGTVSEDDPPGGVIAILSTTDADTEEINRQVSYFITGGDALGQFAVEN---- 2973
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ ++ + V K LDRE Y LT+ A D
Sbjct: 2974 --------------VQSDWRVYVKKPLDREQKD-SYLLTVTATD 3002
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 58/119 (48%), Gaps = 25/119 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP F+ Y TV EN GT + ++A DAD G+N KISYS V D G F+I+
Sbjct: 3123 NAPEFTAEPYTITVFENTEPGTPLTRVQATDAD-TGLNRKISYSLVESAD--GQFSINER 3179
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I + K LDRE+ + Y LTL+AVD+G P R T T
Sbjct: 3180 SGI--------------------IQLEKHLDRELQAV-YTLTLKAVDQGLPRRLTATGT 3217
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 50/114 (43%), Gaps = 26/114 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A++ EN PIG V + A D D G N ++YS+
Sbjct: 460 NPPEFTQTSYKASIDENAPIGAAVTRVSAMDPD-EGENGYVTYSIAN------------- 505
Query: 62 PLNHFRIVPTKID--PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
LNH VP ID GT N LD E+ P Y L +RA D G P R
Sbjct: 506 -LNH---VPFVIDHFTGTVSTSEN------LDYELMPRVYTLRIRASDWGLPYR 549
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y A+V E+ IGT V+ + AA D N++I+Y++ G+ G F+ID+
Sbjct: 3228 NPPVFEYREYGASVSEDIVIGTEVLQVYAASRDIEA-NAEITYAIISGNEHGKFSIDS-- 3284
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I +++ LD E + Y LT+ A D GTP
Sbjct: 3285 ------------------KTGAIFIIESLDYE-SSHEYYLTVEATDGGTP 3315
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKEN P+G ++ + A D D G N K+ Y++ GG+ FTID E +
Sbjct: 727 VKENLPVGANILFMNATDLDS-GFNGKLVYAISGGNDDSCFTIDMETGV----------- 774
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ VL LDRE+ Y L + D G P + ++
Sbjct: 775 ---------LKVLSPLDREVMD-KYTLNITVYDLGIPQKAAWR 807
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P+F VY+A + E+ G V+ ++A DAD ++ K+ YS+ G+ F ID E
Sbjct: 2388 NPPLFEQQVYEARISEHAAHGHFVMCVRACDADSSDLD-KLEYSILSGNDHKSFIIDRE 2445
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 23/101 (22%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
Y V+E+ P GT+++ L+A D D G +S++ YS+ G G+F +D
Sbjct: 933 YSVKVREDLPEGTIIMWLEAYDPD-VGQSSQVRYSLL-DHGEGHFDVD------------ 978
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E L YNLT+RA DKG P
Sbjct: 979 --------KLSGAVRIVQQLDFEKKQL-YNLTVRAKDKGKP 1010
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y V E+ +G++V+ + A D D G N+++ YS+ G+ FTID
Sbjct: 1560 HAPWFTSPSYDGRVYESAAVGSVVLQVTALDKD-KGRNAEVLYSIESGNIGNSFTID--- 1615
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+ +I + LDR + Y+L ++A DKG PP
Sbjct: 1616 PILG-----------------SIKTARELDRS-HQVDYDLMVKATDKGDPP 1648
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+++PVF Y+ + EN P+ TLV+ +KA+D D G+ S ++Y + F +++
Sbjct: 2489 LHSPVFHQNEYEVELAENAPLHTLVVQVKASDRD-SGIYSHVTYHIVNDFAKDRFYVNDR 2547
Query: 61 GPL 63
G +
Sbjct: 2548 GQI 2550
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 10 VYQATVKENQPIGTLV-ITLKAADADPPGMNSKISYSVRGGDG-LGYFTIDNEGPLNHFR 67
V+ E PI T V ++ D DP + +G +G + +I L F+
Sbjct: 246 VHVEQANECAPIITAVTLSPSELDKDPTYAIITVEDCDQGANGEIASLSIVAGDFLQQFK 305
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
V + PG+K + + + +D + P GYNLTL+A DKGTPP+
Sbjct: 306 TVRSF--PGSKA--FKVKAVGAVDWDSHPYGYNLTLQAKDKGTPPQ 347
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 21/114 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S+ VY + EN P V+ ++A D D N K++Y + G+ G+F+I +
Sbjct: 1136 NAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSS-NDKLTYRITSGNPQGFFSIHPK- 1193
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
T + T +K LDRE + L + D G PPR T
Sbjct: 1194 ---------TGLITTTSRK---------LDREQQD-EHILEVTVTDNGVPPRST 1228
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y+ + + GT V+ + A+DAD G N+ ++Y++ D+E
Sbjct: 2594 NAPQFRSTKYEVNIGSSAAKGTSVVKVFASDAD-EGSNADVTYAIEA---------DSES 2643
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I K+ KE L L+ E + +RAVD G+PPRE+
Sbjct: 2644 VKENLEI--NKLTGLITTKE----SLIGLENEF----FTFFVRAVDSGSPPRES 2687
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTID 58
N+PV Y+A + EN P G+ VI ++A+D D G N ++ YS+ + D + F I+
Sbjct: 2807 NSPVLESSPYEAFIVENLPGGSRVIQIRASDLD-SGANGQVMYSLDQSQDADIIESFAIN 2865
Query: 59 NE 60
E
Sbjct: 2866 ME 2867
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y T+ E+ G LV+ + A DAD N++I+Y++ G +
Sbjct: 3021 NSPVCEKTSYSDTIPEDALPGKLVMQVSATDADIRS-NAEITYTLFGSGAEKF------- 3072
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
K++P T + + L LLDRE + YNL ++A D G
Sbjct: 3073 ----------KLNPDTGE----LRTLALLDREEQAV-YNLLVKATDGG 3105
Score = 35.8 bits (81), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS Y ++EN+P+G V+ L D D +++ G+ F ++ G
Sbjct: 3438 NAPLFSRDNYSVIIQENKPVGFSVLKLVVTDKDSSHNGPPFFFTIVSGNDENAFEVNQHG 3497
Query: 62 PL 63
L
Sbjct: 3498 VL 3499
>gi|301770721|ref|XP_002920779.1| PREDICTED: protocadherin Fat 3-like [Ailuropoda melanoleuca]
Length = 4557
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F ID+E
Sbjct: 1038 LHTPYFPDFAVVGSVKENSRIGTSVLQVAAQD-DDSGRDGEIQYSIRDGSGLGRFNIDDE 1096
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I +LDRE Y LT+ A D+G P
Sbjct: 1097 SGV--------------------ISTADILDRETTG-SYWLTVYATDRGVVP 1127
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 2920 NAPVFAHEVYRGNVKESDPPGEVVAVLSTWDRDTSDVNRQVSYHITGGNPRGRFAL---- 2975
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 2976 --------------GLVQSEWKVYVKRPLDREEQDI-YFLNITATD 3006
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS Y A + E+ +G VI L A DAD N +I +S+ GD DNE
Sbjct: 3337 NPPRFSQDTYSAVISEDALVGDSVILLVAEDADSQP-NGQIRFSIVNGDR------DNE- 3388
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
F + P KKK LDRE GY+L ++AVD G P
Sbjct: 3389 ----FAVEPVLGLVKVKKK---------LDRERVS-GYSLLVQAVDSGIP 3424
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 25/109 (22%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI ++A D D PG +ISY++ F ID+ G
Sbjct: 2493 SPAFSQSTYVAEVRENTAAGTKVIHVRATDGD-PGTYGQISYTIINDFAKDRFLIDSNG- 2550
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLT--LRAVDKG 109
++ + LDRE PL +++ LRA+D G
Sbjct: 2551 --------------------QVITTERLDRE-NPLEGDISIFLRALDGG 2578
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F +Y A V E+ P+GT V+ + A+D D G N I+YS+ + L +
Sbjct: 468 HTPEFQQPLYDAFVNESVPVGTSVLMVSASDKD-KGENGYITYSIASLNLLPF------- 519
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 520 AINQFTGV--------------ISTTEELDFESSPETYRFIVRASDWGSPYRH 558
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 17/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ S+ +Y V EN P VI ++A D D N K++Y + G+ +F I
Sbjct: 1144 NAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSS-NEKLTYRITSGNPQNFFAINTKT 1202
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNI-VVLKLLDR 92
D E HF V T D G+ K+ I VV+++LD
Sbjct: 1203 GLITTTSRKLDREQQAEHFLEV-TVTDGGSSPKQSTIWVVVQVLDE 1247
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D S+S+ G+ F +D G
Sbjct: 3442 NSPVFTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPPFSFSILSGNEEEEFVLDPHG 3501
Query: 62 PL 63
L
Sbjct: 3502 IL 3503
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 24/110 (21%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFR 67
F VKEN P+G ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 729 FPSDVAVKENLPVGANILKIKAYDAD-SGFNGKVLFTISDGNTDSCFNIDMETGQLK--- 784
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 785 ------------------VLLPMDREHTDL-YLLNITIYDLGNPQKSSWR 815
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D++
Sbjct: 2390 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYSILSGNDRTSFLMDSKS 2448
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 37/78 (47%), Gaps = 16/78 (20%)
Query: 37 GMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIA 95
G N +I S S+ GD PL+ F +V G EY I K +D
Sbjct: 293 GANGEIESVSIVAGD-----------PLDQFFLVK----EGRWMNEYKIKERKKVDWGSF 337
Query: 96 PLGYNLTLRAVDKGTPPR 113
P GYNLTL+A DKG+P +
Sbjct: 338 PYGYNLTLQAKDKGSPQK 355
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ GT V+ + A D G N++I+Y +R G+ G
Sbjct: 3232 NPPVFERRDYLVTVPEDTSPGTQVLAVFATSKDI-GTNAEITYLIRSGNEQG-------- 3282
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
FRI P K I V ++LD E+ + L + A D GTP
Sbjct: 3283 ---RFRINP---------KTGGISVSEVLDYELCK-KFFLVVEAKDGGTP 3319
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y A E+ +++ + A DAD G N I YS+ G +F
Sbjct: 3025 NSPVCEQVAYTALFPEDISSNKIILKVSAKDAD-IGSNGDIRYSLYGSGNDEFF------ 3077
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+DP + + + L LLDRE P+ Y+L RA D G
Sbjct: 3078 -----------LDPESGE----LKTLALLDRERVPM-YSLIARATDGG 3109
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 25/120 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVF Y A V+ + GTL+ + A D D G N +++Y ++ D G+F I+ N
Sbjct: 2080 NSPVFVGLPYYAAVQVDAEPGTLIYQVTAIDKD-KGANGEVTYILQ--DDYGHFEINPNS 2136
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
G N+++ + + +++ + Y +T+ A D G P T P
Sbjct: 2137 G---------------------NVILKEAFNSDLSNIEYGVTVLAKDGGKPSLSTSVELP 2175
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F ID
Sbjct: 933 SPAFIPSSYSVKVLEDLPVGTVIAWLETHDPD-LGLGGQVRYSLV-NDYNGRFEID---- 986
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 987 ----------------KASGAIRLSKELDYEKQQF-YNLTVRAKDKGRP 1018
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG----LGYFTI 57
N PVF Y+ + E P+GT + ++A D D G N +++YS+ + F I
Sbjct: 2810 NKPVFETSSYETIIMEGMPVGTKLTQVRAIDMD-WGANGQVTYSLHSDSQPEKVMEAFNI 2868
Query: 58 D-NEGPLNHFRIVPTKIDP 75
D N G ++ + + + DP
Sbjct: 2869 DSNTGWISTLKDLDHETDP 2887
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---------RGGDGL 52
N+PVF Y + E+ IGT +I ++A D D G N +++YSV G+
Sbjct: 827 NSPVFLQDSYSVNILESSSIGTEIIQVEARDKD-LGSNGEVTYSVLTDTQQFAINSSTGI 885
Query: 53 GYFT--IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLL 90
Y +D E N+ + + + ++ +++V LK+
Sbjct: 886 VYVADQLDRESKANYSLKIEARDRAESGQQLFSVVTLKVF 925
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F++ +Y+A+V E+ +G+ ++ + A D D G N+++ Y++ G N G
Sbjct: 1562 HSPYFTNPLYEASVFESAALGSAILQVTALDKD-KGENAELIYTIEAG---------NTG 1611
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F+I P I+ L + L++R D+G+PP
Sbjct: 1612 --NTFKIEPV----------LGIITLSKEPDMTTTGQFVLSVRVTDQGSPP 1650
>gi|350588390|ref|XP_003357289.2| PREDICTED: protocadherin Fat 3 [Sus scrofa]
Length = 4301
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F ID+E
Sbjct: 1037 LHTPYFPDFAVVGSVKENSRIGTSVLQVTAHDED-SGRDGEIQYSIRDGSGLGRFNIDDE 1095
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I +LDRE Y LT+ A D+G P
Sbjct: 1096 SGV--------------------ISTADILDRETTG-SYWLTVYATDRGVVP 1126
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 2919 NAPVFAHEVYRGNVKESDPPGEVVAVLSTWDRDTSDINRQVSYHITGGNPRGRFAL---- 2974
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 2975 --------------GLVQSEWKVYVKRPLDREEQDM-YFLNITATD 3005
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 22/116 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D S+S+ G+ F +D+ G
Sbjct: 3441 NSPVFTPANYTAVIQENKPVGTSILQLMVTDRDSFHNGPPFSFSILSGNEEEAFVLDSHG 3500
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
L + VV R L Y L ++A D G P + ++
Sbjct: 3501 ILR------------------SAVVF----RHTESLEYVLCVQAKDSGKPQQASHS 3534
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F +Y A V E+ P+GT V+T+ A+D D G N I+YS+ + L +
Sbjct: 467 HTPEFQQPLYDAFVNESVPVGTSVLTVSASDKD-KGENGYITYSIASLNLLPF------- 518
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 519 AINQFTGV--------------ISTTEELDFESSPETYRFIVRASDWGSPYRH 557
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 25/109 (22%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI ++A D D PG +ISY++ F ID G
Sbjct: 2492 SPAFSQSTYVAEVRENAAAGTKVIHVRATDGD-PGTYGQISYAIINDFAKDRFLIDGNG- 2549
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLT--LRAVDKG 109
++ + LDRE PL +++ LRA+D G
Sbjct: 2550 --------------------QVITTERLDRE-NPLEGDISIFLRALDGG 2577
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 41/79 (51%), Gaps = 18/79 (22%)
Query: 37 GMNSKI-SYSVRGGDGLGYFTIDNEGP-LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREI 94
G N +I S S+ GD L F + EG +N +RI K+K K +D E
Sbjct: 292 GANGEIESVSIVAGDPLDQFFLAKEGKWMNEYRI---------KEK-------KQVDWES 335
Query: 95 APLGYNLTLRAVDKGTPPR 113
P GYNLTL+A DKG+P +
Sbjct: 336 FPYGYNLTLQAKDKGSPQK 354
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 25/109 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A V EN L+ ++A D D G+N K+ YS+ G+F+ID
Sbjct: 3126 NPPVFSSDHYNACVYENTATKALLTRVQAMDPD-VGINRKVVYSL-ADSANGFFSIDGSS 3183
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKL-LDREIAPLGYNLTLRAVDKG 109
IV+L+ LDRE YN+++RA D+
Sbjct: 3184 ---------------------GIVILEQPLDRE-QQSAYNISVRATDQS 3210
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 17/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ S+ +Y V EN P VI ++A D D N K++Y + G+ +F I
Sbjct: 1143 NAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSS-NEKLTYRITSGNPQNFFAINSKT 1201
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNI-VVLKLLDR 92
D E HF V T D G K+ I VV+++LD
Sbjct: 1202 GLITTTSRKLDREQQAEHFLEV-TVTDGGFSPKQSTIWVVVQVLDE 1246
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 24/110 (21%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFR 67
F VKE+ P+G ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 728 FPSDVAVKEDLPVGANILKIKAYDAD-SGFNGKVLFTISDGNTDSCFNIDMETGQLK--- 783
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P R +++
Sbjct: 784 ------------------VLMPMDREHRDL-YLLNITIYDLGNPQRSSWR 814
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVF+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D
Sbjct: 2389 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYSILSGNDRTSFLMD 2444
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 48/110 (43%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS VY A + E+ +G VI L A DAD N +I +S+ GD F +D
Sbjct: 3336 NPPRFSQDVYSAVISEDALVGDSVILLIAEDADSQP-NGQIRFSIVNGDRDSEFAVD--- 3391
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ V K LDRE GY+L ++AVD G P
Sbjct: 3392 -----------------PVLGLLKVKKKLDRERVS-GYSLLVQAVDSGIP 3423
Score = 38.5 bits (88), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y A E+ P +++ + A DAD G N I YS+ G +F
Sbjct: 3024 NSPVCDQVAYTAVFPEDIPSNKIILKVSAKDAD-IGSNGDIRYSLYGSGNNEFF------ 3076
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+DP + + + L LDRE P+ YNL RA D G
Sbjct: 3077 -----------LDPESGE----LKTLARLDRERIPV-YNLVARATDGG 3108
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ GT V+ + A D G N++I+Y +R G+ G
Sbjct: 3231 NPPVFERRDYLVTVPEDTSPGTQVLAVFATSKDI-GTNAEITYLIRSGNEQG-------- 3281
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
FRI P K I V ++LD E+ Y L + A D GTP
Sbjct: 3282 ---KFRIHP---------KTGGISVSEILDYELCKKFY-LVVEAKDGGTP 3318
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 12/100 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---------RGGDGL 52
N+PVF Y T+ E+ IGT +I ++A D D G N +++YSV G+
Sbjct: 826 NSPVFLQDSYSVTILESSSIGTEIIQVEARDKD-LGSNGEVTYSVLTDTQQFAINSSTGI 884
Query: 53 GYFT--IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLL 90
Y +D E N+ + + + ++ +++V L++
Sbjct: 885 VYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLEVF 924
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG----LGYFTI 57
N PVF Y+ + E P+GT + ++A D D G N +++YS+ + F I
Sbjct: 2809 NKPVFETSSYETIIMEGMPVGTKLTQVRAIDMD-WGANGQVTYSLHSDSQPEKVMEAFNI 2867
Query: 58 D-NEGPLNHFRIVPTKIDPG 76
D N G ++ + + + DP
Sbjct: 2868 DSNTGWISTLKDLDHETDPA 2887
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F ID
Sbjct: 932 SPAFIPSSYSVKVLEDLPVGTVIAWLETHDPD-LGLGGQVRYSLV-NDYNGRFEID---- 985
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 986 ----------------KASGAIRLSKELDYEKQQF-YNLTVRAKDKGRP 1017
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 23/119 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF Y A V+ + GT + + A D D G N +++Y ++ G
Sbjct: 2079 NSPVFVGLPYYAAVQVDAEPGTQIYRVTAIDKD-KGANGEVTYVLQDDYG---------- 2127
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
HF I PT N+++ + + +++ + Y +T+ A D G P T P
Sbjct: 2128 ---HFEINPTS---------GNVILKEAFNSDLSNIEYGVTILAKDGGKPSLSTSVELP 2174
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F++ +Y+A+V E+ +G+ V+ + A D D G N+++ Y++ G N G
Sbjct: 1561 HSPYFTNPLYEASVFESAALGSAVLQVTALDKD-KGENAELIYTIEAG---------NTG 1610
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F+I P + T KE ++ + + L+++ D+G+PP
Sbjct: 1611 --NTFKIEPV-LGIITVSKEPDMTTMG---------QFVLSVKVTDQGSPP 1649
>gi|157951641|ref|NP_001074755.2| FAT tumor suppressor homolog 1 precursor [Mus musculus]
Length = 4590
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 57/116 (49%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVFS FV + VKE+ P G+ V+T+ A D D G + +I YS+R G G+G F ID E
Sbjct: 1030 LHTPVFSSFVEKGVVKEDVPTGSSVMTVSAHDED-TGRDGEIRYSIRDGSGIGVFRIDEE 1088
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE + Y LT+ A D+G P ++
Sbjct: 1089 TGV--------------------IETSDRLDRE-STSHYWLTVYATDQGVVPLSSF 1123
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVFS Y V E+ + VIT+ A DAD P NS I YS+ G+ FTID
Sbjct: 3333 NSPVFSQDTYTTVVSEDAALEQPVITIMADDADGPS-NSHIHYSIIEGNQGSPFTID--- 3388
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P + + + V K LDRE GY LT++A D G PPR
Sbjct: 3389 --------PVRGE---------VKVTKPLDRETIS-GYTLTVQAADNGNPPR 3422
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N ++SY + GGD LG F ++N
Sbjct: 2918 PRFTAEIYKGTVSEDDPPGGVIAILSTTDADTEEINRQVSYFITGGDALGQFAVEN---- 2973
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ ++ + V K LDRE Y LT+ A D
Sbjct: 2974 --------------VQSDWRVYVKKPLDREQKD-SYLLTVTATD 3002
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 58/119 (48%), Gaps = 25/119 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP F+ Y TV EN GT + ++A DAD G+N KISYS V D G F+I+
Sbjct: 3123 NAPEFTAEPYTITVFENTEPGTPLTRVQATDAD-TGLNRKISYSLVESAD--GQFSINER 3179
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I + K LDRE+ + Y LTL+AVD+G P R T T
Sbjct: 3180 SGI--------------------IQLEKHLDRELQAV-YTLTLKAVDQGLPRRLTATGT 3217
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 50/114 (43%), Gaps = 26/114 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A++ EN PIG V + A D D G N ++YS+
Sbjct: 460 NPPEFTQTSYKASIDENAPIGAAVTRVSAMDPD-EGENGYVTYSIAN------------- 505
Query: 62 PLNHFRIVPTKID--PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
LNH VP ID GT N LD E+ P Y L +RA D G P R
Sbjct: 506 -LNH---VPFVIDHFTGTVSTSEN------LDYELMPRVYTLRIRASDWGLPYR 549
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKEN P+G ++ + A D D G N K+ Y++ GG+ FTID E +
Sbjct: 727 VKENLPVGANILFMNATDLDS-GFNGKLVYAISGGNDDSCFTIDMETGV----------- 774
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ VL LDRE+ Y L + D G P R ++
Sbjct: 775 ---------LKVLSPLDREVMD-KYTLNITVYDLGIPQRAAWR 807
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y A+V E+ IGT V+ + AA D N++I+Y++ G+ G F+ID+
Sbjct: 3228 NPPVFEYREYGASVSEDIVIGTEVLQVYAASRDIEA-NAEITYAIISGNEHGKFSIDS-- 3284
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I +++ LD E + Y LT+ A D GTP
Sbjct: 3285 ------------------KTGAIFIIESLDYE-SSHEYYLTVEATDGGTP 3315
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P+F VY+A + E+ G V+ ++A DAD ++ K+ YS+ G+ F ID E
Sbjct: 2388 NPPLFEQQVYEARISEHAAHGHFVMCVRACDADSSDLD-KLEYSILSGNDHKSFIIDRE 2445
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 23/101 (22%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
Y V+E+ P GT+++ L+A D D G +S++ YS+ G G+F +D
Sbjct: 933 YSVKVREDLPEGTIIMWLEAYDPD-VGQSSQVRYSLL-DHGEGHFDVD------------ 978
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E L YNLT+RA DKG P
Sbjct: 979 --------KLSGAVRIVQQLDFEKKQL-YNLTVRAKDKGKP 1010
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y V E+ +G++V+ + A D D G N+++ YS+ G+ FTID
Sbjct: 1560 HAPWFTSPSYDGRVYESAAVGSVVLQVTALDKD-KGRNAEVLYSIESGNIGNSFTID--- 1615
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+ +I + LDR + Y+L ++A DKG PP
Sbjct: 1616 PILG-----------------SIKTARELDRS-HQVDYDLMVKATDKGDPP 1648
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+++PVF Y+ + EN P+ TLV+ +KA+D D G+ S ++Y + F +++
Sbjct: 2489 LHSPVFHQNEYEVELAENAPLHTLVVQVKASDRD-SGIYSHVTYHIVNDFAKDRFYVNDR 2547
Query: 61 GPL 63
G +
Sbjct: 2548 GQI 2550
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 10 VYQATVKENQPIGTLV-ITLKAADADPPGMNSKISYSVRGGDG-LGYFTIDNEGPLNHFR 67
V+ E PI T V ++ D DP + +G +G + +I L F+
Sbjct: 246 VHVEQANECAPIITAVTLSPSELDKDPTYAIITVEDCDQGANGEIASLSIVAGDLLQQFK 305
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
V + PG+K + + + +D + P GYNLTL+A DKGTPP+
Sbjct: 306 TVRSF--PGSKA--FKVKAVGAVDWDSHPYGYNLTLQAKDKGTPPQ 347
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 21/114 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S+ VY + EN P V+ ++A D D N K++Y + G+ G+F+I +
Sbjct: 1136 NAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSS-NDKLTYRITSGNPQGFFSIHPK- 1193
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
T + T +K LDRE + L + D G PPR T
Sbjct: 1194 ---------TGLITTTSRK---------LDREQQD-EHILEVTVTDNGVPPRST 1228
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y+ + + GT V+ + A+DAD G N+ ++Y++ D+E
Sbjct: 2594 NAPQFRSTKYEVNIGSSAAKGTSVVKVFASDAD-EGSNADVTYAIEA---------DSES 2643
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I K+ KE L L+ E + +RAVD G+PPRE+
Sbjct: 2644 VKENLEI--NKLTGLITTKE----SLIGLENEF----FTFFVRAVDSGSPPRES 2687
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTID 58
N+PV Y+A + EN P G+ VI ++A+D D G N ++ YS+ + D + F I+
Sbjct: 2807 NSPVLESSPYEAFIVENLPGGSRVIQIRASDLD-SGANGQVMYSLDQSQDADIIESFAIN 2865
Query: 59 NE 60
E
Sbjct: 2866 ME 2867
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y T+ E+ G LV+ + A DAD N++I+Y++ G +
Sbjct: 3021 NSPVCEKTSYSDTIPEDALPGKLVMQVSATDADIRS-NAEITYTLFGSGAEKF------- 3072
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
K++P T + + L LLDRE + YNL ++A D G
Sbjct: 3073 ----------KLNPDTGE----LRTLALLDREEQAV-YNLLVKATDGG 3105
Score = 35.8 bits (81), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS Y ++EN+P+G V+ L D D +++ G+ F ++ G
Sbjct: 3438 NAPLFSRDNYSVIIQENKPVGFSVLKLVVTDKDSSHNGPPFFFTIVSGNDENAFEVNQHG 3497
Query: 62 PL 63
L
Sbjct: 3498 VL 3499
>gi|348543886|ref|XP_003459413.1| PREDICTED: protocadherin Fat 3-like [Oreochromis niloticus]
Length = 4593
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 55/114 (48%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS VY A V E+ +G VI LKA D D +N + YS+ GD F ID
Sbjct: 3350 NPPMFSHSVYTAVVSEDATVGEPVIQLKADDVDSQ-LNGAVLYSIVSGDRHNQFLID--- 3405
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
PL+ I V K LDRE P Y+L +RA+D GTPP +
Sbjct: 3406 PLSGV-----------------IKVNKQLDRETVP-SYSLAIRALDSGTPPMSS 3441
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 54/115 (46%), Gaps = 22/115 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+ AP FSDF VKEN IGT ++ + A D D G + ++ YS+R G GLG F ID E
Sbjct: 1039 LYAPYFSDFALTGLVKENARIGTTLLQVTAND-DDAGRDGEVQYSIRDGSGLGRFAIDEE 1097
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I +LDRE + Y LT+ A D G P+ T
Sbjct: 1098 TGV--------------------IYTTDMLDRE-SKDSYWLTVYATDHGVVPQFT 1131
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+++PVF +Y A ++EN +GT VI +KA DAD PG I+YS G F+ID
Sbjct: 2495 LHSPVFGQNMYGAELRENAAVGTKVIQVKATDAD-PGEFGLITYSFVNDVGKDKFSIDAN 2553
Query: 61 GPL 63
G +
Sbjct: 2554 GQI 2556
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 24/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F+ +Y+ +V E+ +G+ V+ + A D D G N+++ YS+ G N G
Sbjct: 1566 HVPNFTSALYEGSVYESAAVGSAVVQVTALDKDK-GENAELHYSIEAG---------NSG 1615
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVDKGTPPRET 115
N F++ P G I V LD ++ +G Y LT+R +D G+PP T
Sbjct: 1616 --NTFQVEPVL---GV------ITVAHELD--LSSIGHYILTVRVIDSGSPPLST 1657
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 50/108 (46%), Gaps = 23/108 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+F VY+ V E+ PIGT+V L+ D D G+ ++ YS+ D G+F +D +
Sbjct: 935 PLFIPAVYRTRVLEDLPIGTVVAWLETLDPD-LGLGGQVRYSL-ASDYNGWFEVDRANGV 992
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I + K LD E YNLT++A DKG P
Sbjct: 993 --------------------IRLTKELDYETQQF-YNLTVKAKDKGRP 1019
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 25/111 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ Y +V E+ L+ ++A D D G + YS+ G G+F+ID
Sbjct: 3140 NPPIFTQSRYTTSVYEDTVTKALLTRIQAIDPD-EGPGRMVIYSLADSAG-GFFSID--- 3194
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVL-KLLDREIAPLGYNLTLRAVDKGTP 111
K IVVL ++LDREI P Y +T+ A D+G+P
Sbjct: 3195 ------------------KYSGIVVLEQVLDREIQPF-YQITVCASDQGSP 3226
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF A+V E+ +GT V+ + AA D G N++I+YS+R G+ G F I
Sbjct: 3245 NPPVFERRDQLASVPEDVGVGTEVLRVYAASKDI-GTNAEITYSIRSGNEHGKFHIH--- 3300
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
PL +V +D T + Y LT+ A D GTP
Sbjct: 3301 PLTGAILVAQPLDYETCRD------------------YFLTVEARDGGTP 3332
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 45/113 (39%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P+F Y+ + E IGT + + A D D NS + Y + + YF ID+
Sbjct: 2287 NPPIFQKMTYRVVLSETAMIGTPALQVVATDKDSE-KNSVVRYQIFSNSRNNTEYFHIDS 2345
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L I+ ++LD E+ Y+ +RA D G PP
Sbjct: 2346 SSGL--------------------ILTARMLDHELLQ-KYDFIVRATDNGFPP 2377
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F+ Y+ V E+ P+ T V+T+ A D D G N I+YS+ L +
Sbjct: 468 HTPTFAQSSYEVFVNESVPVATSVLTVSAVDKD-KGENGYITYSISSLQPLPF------- 519
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+N F V I + LD E + + +RA D G+P R
Sbjct: 520 KINQFSGV--------------ISTTEELDFESSSESFMFIVRASDWGSPYR 557
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 14/108 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y T+ E P+GT +I ++A D D G N +++Y++ L D++
Sbjct: 2819 NKPAFEANSYDTTIMEGMPVGTRIIQVQARDPD-SGANGQVTYTL---GSLIQLKEDSDT 2874
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
++ F ID T I K LD E +P Y T+ A D G
Sbjct: 2875 LVSTF-----SIDSNTGW----ITTRKDLDHETSP-SYTFTVVASDLG 2912
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 11/76 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP F Y+A+VK + G LV ++A D D G+N+K++YS+ + I
Sbjct: 2600 NAPCFRATEYRASVKSDVAQGFLVTQIQAHDPD-HGINAKVTYSLYSEANVPVVDILEID 2658
Query: 58 -DN-----EGPLNHFR 67
DN +G +HFR
Sbjct: 2659 PDNGWMVTKGSFSHFR 2674
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVF+ +Y+A V E G + ++A+DAD + K+ YS+ G+ F I+
Sbjct: 2394 NPPVFNQLLYEAYVNELATRGHFITCVQASDADSSDFD-KLEYSILSGNEKRNFAIE 2449
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F + +V+E+ G +V L D D N ++SY + GG+ G F +
Sbjct: 2933 NPPRFMENHIFGSVQESDRPGEVVAVLITRDDDSSAFNRQVSYHITGGNYRGVFAL---- 2988
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V LDRE L YN+ + A D
Sbjct: 2989 --------------GLVQGEWKMYVKGPLDREECNL-YNINVTASD 3019
>gi|426252195|ref|XP_004019801.1| PREDICTED: protocadherin Fat 3 [Ovis aries]
Length = 4477
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F ID+E
Sbjct: 1037 LHTPYFPDFAVVGSVKENSRIGTSVLQVTAHDED-SGRDGEIQYSIRDGSGLGRFNIDDE 1095
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I +LDRE Y LT+ A D+G P
Sbjct: 1096 SGV--------------------ISTADILDRETTG-SYWLTVYATDRGVVP 1126
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 2919 NAPVFAHEVYRGNVKESDPPGEVVAVLSTWDRDTSDINRQVSYHITGGNPRGRFAL---- 2974
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 2975 --------------GLVQSEWKVYVKRHLDREEQDI-YFLNITATD 3005
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 24/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F +Y+A V E+ P+GT V+T+ A+D D G N I+YS+ + L +
Sbjct: 467 HTPEFQQLLYEAFVNESVPVGTSVLTVSASDKD-KGENGYITYSIASLNALPF------- 518
Query: 62 PLNHFR-IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F I+ T D LD E +P Y +RA D G+P R
Sbjct: 519 AINQFTGIISTTED---------------LDFESSPETYRFIVRASDWGSPYRH 557
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 53/114 (46%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS VY A + E+ +G VI L A DAD N +I +S+ GD DNE
Sbjct: 3336 NPPEFSQDVYSAVISEDALVGDSVILLIAEDADSQP-NGQIRFSIVNGDR------DNE- 3387
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
F + P KKK LDRE GY+L ++AVD G PP +
Sbjct: 3388 ----FAVDPVLGLVKVKKK---------LDRERVS-GYSLLIQAVDSGMPPMSS 3427
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI ++A D D PGM +ISY++ F ID G
Sbjct: 2492 SPAFSQSTYVAEVRENAAAGTKVIHVRATDGD-PGMYGQISYAIINDFAKDRFLIDGNGQ 2550
Query: 63 L 63
+
Sbjct: 2551 V 2551
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 45/88 (51%), Gaps = 19/88 (21%)
Query: 28 LKAADADPPGMNSKI-SYSVRGGDGLGYFTIDNEGP-LNHFRIVPTKIDPGTKKKEYNIV 85
+ A D D G N +I S S+ GD L F + EG +N +RI K+K
Sbjct: 284 VTAEDLDE-GANGEIESVSIVAGDPLDQFFLAKEGKWVNEYRI---------KEK----- 328
Query: 86 VLKLLDREIAPLGYNLTLRAVDKGTPPR 113
K +D E P GYNLTL+A DKG+P +
Sbjct: 329 --KPVDWESFPYGYNLTLQAKDKGSPQK 354
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ A ++EN+P+GT V+ L D D S+S+ G+ F +D++G
Sbjct: 3441 NSPVFTPANATAVIQENKPVGTSVLQLMVTDKDSFHNGPPFSFSILSGNEEEAFVLDSDG 3500
Query: 62 PL 63
L
Sbjct: 3501 IL 3502
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 17/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ S+ +Y V EN P VI ++A D D N K++Y + G+ +F I
Sbjct: 1143 NAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSS-NEKLTYRITSGNPQNFFAINVKT 1201
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNI-VVLKLLDR 92
D E HF V T D G K+ I VV+++LD
Sbjct: 1202 GLITTTSRKLDREQQAEHFLEV-TVTDGGFSPKQSTIWVVVQVLDE 1246
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 24/110 (21%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFR 67
F VKEN P+G ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 728 FPSDVAVKENLPVGANILKIKAYDAD-SGFNGKVLFTISDGNMDSCFNIDMETGQLQ--- 783
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 784 ------------------VLMPMDREHRDL-YLLNITIYDLGNPQKSSWR 814
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D++
Sbjct: 2389 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYSILSGNDRTSFLMDSKS 2447
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A V EN L+ ++A D D G+N K+ YS+ G+F++D+
Sbjct: 3126 NPPVFSSDHYNACVYENTATKALLTRVQAVDPD-VGVNRKVVYSL-ADSADGFFSVDSSS 3183
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ +V+ + LDRE Y L +RA D+
Sbjct: 3184 GI--------------------VVLERPLDRE-QQSSYTLRVRATDQS 3210
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 12/100 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---------RGGDGL 52
N+P+F Y + E+ IGT +I ++A+D D G N +++YSV G+
Sbjct: 826 NSPIFIQDSYSVNILESSSIGTEIIQVEASDKD-LGSNGEVTYSVLTDTQQFAINSSTGI 884
Query: 53 GYFT--IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLL 90
Y +D E N+ + + + ++ +++V LK+
Sbjct: 885 VYIADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVF 924
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 25/120 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVF Y A V+ + GTL+ + A D D G N +++Y ++ D G+F I+ N
Sbjct: 2079 NSPVFVGLPYYAAVQVDAEPGTLIYRVTAIDKD-KGANGEVTYVLQ--DDYGHFEINPNS 2135
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
G N+++ + + +++ + Y +T+ A D G P T P
Sbjct: 2136 G---------------------NVILKEAFNSDLSNIEYGVTILARDGGKPSLSTSVELP 2174
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 60/119 (50%), Gaps = 9/119 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F++ +Y+A+V E+ +G+ V+ + A D D G N+++ Y++ G+ F I+
Sbjct: 1561 HSPYFTNPLYEASVFESAALGSAVLQVTALDKD-KGENAELMYTIEAGNTGNTFKIE--- 1616
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLR---AVDKGTPPRETYK 117
P+ I+ +P ++ +K+ D+ P+ +R + + PR T+K
Sbjct: 1617 PV--LGIITVSKEPDMTTMGQFVLSVKVTDQGSPPMSATAIVRISVTMSDNSNPRFTHK 1673
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG----LGYFTI 57
N PVF Y+ + E P+GT + ++A D D G N +++YS+ + F+I
Sbjct: 2809 NKPVFETSNYETVIMEGMPVGTRLTQVRAMDVD-WGANGQVTYSLHSDAQPEKVMEAFSI 2867
Query: 58 D-NEGPLNHFRIVPTKIDP 75
D N G ++ + + + DP
Sbjct: 2868 DSNTGWISTLKDLDHETDP 2886
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F ID
Sbjct: 932 SPAFIPSSYSVKVLEDLPVGTVIAWLETHDPD-LGLGGQVRYSLV-NDYNGRFEID---- 985
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + + LD E YNLT+RA DKG P
Sbjct: 986 ----------------KASGAIRLSRELDYEKQQF-YNLTVRAKDKGRP 1017
>gi|71725377|ref|NP_001025159.1| protocadherin Fat 2 precursor [Mus musculus]
gi|81888837|sp|Q5F226.1|FAT2_MOUSE RecName: Full=Protocadherin Fat 2; AltName: Full=FAT tumor suppressor
homolog 2; Flags: Precursor
gi|148701548|gb|EDL33495.1| mCG1445 [Mus musculus]
Length = 4351
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+++P FS FVYQ V+EN P GT V+ + A D D G++ ++ Y +R G GL F+I+ +
Sbjct: 1027 LHSPHFSSFVYQGQVQENSPAGTQVMVVTAQD-DDSGLDGELQYFLRAGTGLEAFSINQD 1085
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ + L LDRE P Y LT+ AVD+G+ P
Sbjct: 1086 TGM--------------------LETLAPLDREFTPY-YWLTVLAVDRGSVP 1116
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 40/109 (36%), Positives = 57/109 (52%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y V EN +G +++T+ A+D D P +NS I+YS+ GG+ LG+FTID
Sbjct: 3321 PRFTHDLYTVRVLENAIVGDVILTVSASDDDGP-VNSVITYSLVGGNQLGHFTID----- 3374
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+ + V K LD E P Y+L +RA D G PP
Sbjct: 3375 ---------------PKKGKLQVAKALDWEQTP-SYSLRIRATDSGQPP 3407
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 52/113 (46%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+APVF+ Y+ T+ EN P GT V+T+ A D D G N I+YS+ G
Sbjct: 454 HAPVFNRSSYEGTLDENIPPGTSVLTVTATDQD-HGDNGHITYSIAGP------------ 500
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+ VP IDP I K +D E+ Y +RA D G+P R+
Sbjct: 501 -----KAVPFSIDPYLGV----ISTTKSMDYELMKRIYTFRVRASDWGSPFRQ 544
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+ +V EN G LV TLK DAD N +++ + GD LG F+I G
Sbjct: 2904 NPPRFASEDYRGSVVENNEPGELVATLKTLDADISEQNRQVTCYITEGDPLGQFSISQVG 2963
Query: 62 PLNHFRIVPTK 72
+ +RI K
Sbjct: 2964 --DEWRITSRK 2972
Score = 42.4 bits (98), Expect = 0.064, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P FS VY +V E P T VI L A+D D G N +SY + G D +F I+
Sbjct: 2268 NPPTFSQLVYSTSVSEGSPAQTPVIQLLASDQD-SGQNQDVSYQIVEDGSDVSKFFRIN- 2325
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G+ + + I + LD E A + + +RA D+G PP
Sbjct: 2326 ----------------GSTGEMFTI---QELDYE-AHQHFRVKVRATDRGDPP 2358
Score = 39.3 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
+++P F+ Y+A V + GT ++ ++A DAD G N+++ YS G+ G+F ID+
Sbjct: 1550 LHSPHFTQPRYEANVPDTTTPGTELLQVRAVDAD-RGANAEVHYSFLKGNSEGFFNIDS 1607
Score = 37.0 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N P S V+ +VKE+ P+GT V+ L+A D D K+++++ G+ +G+F +
Sbjct: 1133 NIPSMSRPVFYPSVKEDAPLGTSVLQLEAWDPDFSS-QGKLTFNLTSGNHMGHFIV 1187
Score = 35.4 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY--SVRGGDGL-GYFTID 58
N PVF Y+A + EN P GT VI + A D D G + ++SY SV G + F +D
Sbjct: 2795 NRPVFEADPYKAFLTENMPGGTTVIQVTANDQD-TGSDGQVSYRLSVEPGSNIHQLFAVD 2853
Query: 59 NE 60
+E
Sbjct: 2854 SE 2855
Score = 35.0 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P S +Y V+E+ G ++ + A D D N++I+YS+ G +
Sbjct: 3009 NSPQCSQLLYTGKVREDVTPGHFILKVSAIDVD-MDTNAQITYSLHGPGAQEF------- 3060
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
K+DP T + + L +LDRE + YNL +A D G
Sbjct: 3061 ----------KLDPHTGE----LTTLSVLDRERKDV-YNLVAKATDGG 3093
>gi|332634638|ref|NP_001193811.1| protocadherin Fat 3 precursor [Bos taurus]
gi|296471991|tpg|DAA14106.1| TPA: protocadherin Fat 3-like [Bos taurus]
Length = 4555
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F ID+E
Sbjct: 1037 LHTPYFPDFAVVGSVKENSRIGTSVLQVTAHDED-SGRDGEIQYSIRDGSGLGRFNIDDE 1095
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I +LDRE Y LT+ A D+G P
Sbjct: 1096 SGV--------------------ISTADILDRETTG-SYWLTVYATDRGVVP 1126
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 2919 NTPVFAHKVYRGNVKESDPPGEVVAVLSTWDRDTSDINRQVSYHITGGNPRGRFAL---- 2974
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 2975 --------------GLVQSEWKVYVKRHLDREEQDI-YFLNITATD 3005
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F +Y+A V E+ P+GT V+T+ A+D D G N I+YS+ + L +
Sbjct: 467 HTPEFQQLLYEAFVNESVPVGTSVLTVSASDKD-KGENGYITYSIASLNVLPF------- 518
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 519 AINQFTGV--------------ISTTEDLDFESSPETYRFIVRASDWGSPYRH 557
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 51/110 (46%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS VY A + E+ +G VI L A DAD N +I +S+ GD DNE
Sbjct: 3336 NPPEFSQDVYSAVISEDALVGDSVILLIAEDADSQP-NGQIRFSIVNGDR------DNE- 3387
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
F + P KKK LDRE GY+L ++AVD G P
Sbjct: 3388 ----FAVDPVLGLVKVKKK---------LDRERVS-GYSLLVQAVDSGMP 3423
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI ++A D D PGM +ISY++ F ID G
Sbjct: 2492 SPAFSQSTYVAEVRENAAAGTKVIHVRATDGD-PGMYGQISYAIINDFAKDRFLIDGNGQ 2550
Query: 63 L 63
+
Sbjct: 2551 V 2551
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ A ++EN+P+GT V+ L D D S+S+ G+ F +D++G
Sbjct: 3441 NSPVFTPANATAVIQENKPVGTSVLQLMVTDKDSFHNGPPFSFSILSGNEEEAFVLDSDG 3500
Query: 62 PL 63
L
Sbjct: 3501 IL 3502
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 18/91 (19%)
Query: 25 VITLKAADADPPGMNSKI-SYSVRGGDGLGYFTIDNEGP-LNHFRIVPTKIDPGTKKKEY 82
V + AD G N +I S S+ GD L F + EG +N +R+ K+K
Sbjct: 280 VYAVVTADDLDEGANGEIESVSIVAGDPLDQFFLAKEGKWVNEYRV---------KEK-- 328
Query: 83 NIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
K +D E P GYNLTL+A DKG+P +
Sbjct: 329 -----KPVDWESFPYGYNLTLQAKDKGSPQK 354
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 24/110 (21%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFR 67
F VKEN P+G ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 728 FPSDVAVKENLPVGANILKIKAYDAD-SGFNGKVLFTISDGNMDSCFNIDMETGQLQ--- 783
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 784 ------------------VLMPMDREHRDL-YLLNITIYDLGNPQKSSWR 814
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D++
Sbjct: 2389 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYSILSGNDRTSFLMDSKS 2447
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 48/106 (45%), Gaps = 17/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ S+ +Y V EN P VI ++A D D + K++Y + G+ +F I
Sbjct: 1143 NAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSS-SEKLTYRITSGNPQNFFAINVKT 1201
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNI-VVLKLLDR 92
D E HF V T D G K+ I VV+++LD
Sbjct: 1202 GLITTTSRKLDREQQAEHFLEV-TVTDGGFSPKQSTIWVVVQVLDE 1246
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 16/104 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN-- 59
N PVFS Y A V EN L+ ++A D D G+N K+ YS+ G+F++D+
Sbjct: 3126 NPPVFSSDHYNACVYENTATKALLTRVQAVDPD-VGVNRKVVYSL-ADSANGFFSVDSSS 3183
Query: 60 -----EGPLNH-------FRIVPTKIDPGTKKKEYNIVVLKLLD 91
E PL+ R+ T PG + + +LD
Sbjct: 3184 GIVVLERPLDREQQSSYTLRVQATDQSPGRALSSLATISITVLD 3227
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 25/120 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVF Y A V+ + GTL+ + A D D G N +++Y ++ D G+F I+ N
Sbjct: 2079 NSPVFVGLPYYAAVQVDAEPGTLIYRVTAIDKD-KGANGEVTYVLQ--DDYGHFEINPNS 2135
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
G N+++ + + +++ + Y +T+ A D G P T P
Sbjct: 2136 G---------------------NVILKEAFNSDLSNIEYGVTILARDGGKPSLSTSVELP 2174
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG----LGYFTI 57
N PVF Y+ + E P+GT + ++A D D G N +++YS+ + F+I
Sbjct: 2809 NKPVFETSNYETIIMEGMPVGTKLTQVRAMDVD-WGANGQVTYSLHSDSQPEKVMEAFSI 2867
Query: 58 D-NEGPLNHFRIVPTKIDP 75
D N G ++ + + + DP
Sbjct: 2868 DSNTGWISTLKDLDHETDP 2886
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 60/119 (50%), Gaps = 9/119 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F++ +Y+A+V E+ +G+ V+ + A D D G N+++ Y++ G+ F I+
Sbjct: 1561 HSPYFTNPLYEASVFESAALGSAVLQVTALDKD-KGENAELMYTIEAGNTGNTFKIE--- 1616
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLR---AVDKGTPPRETYK 117
P+ I+ +P ++ +K+ D+ P+ +R + + PR T+K
Sbjct: 1617 PV--LGIITVSKEPDMTTMGQFVLSVKVTDQGSPPMSATAIVRISVTMSDNSNPRFTHK 1673
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---------RGGDGL 52
N+P+F Y + E+ IGT +I ++A D D G N +++YSV G+
Sbjct: 826 NSPIFLQDSYSVNILESSSIGTEIIQVEARDKD-LGSNGEVTYSVLTDTQQFAINSSTGI 884
Query: 53 GYFT--IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLL 90
Y +D E N+ + + + ++ +++V LK+
Sbjct: 885 VYIADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVF 924
Score = 35.4 bits (80), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F ID
Sbjct: 932 SPAFIPSSYSVKVLEDLPVGTVIAWLETHDPD-LGLGGQVRYSLV-NDYNGRFEID---- 985
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + + LD E YNLT+RA DKG P
Sbjct: 986 ----------------KASGAIRLSRELDYEKQQF-YNLTVRAKDKGRP 1017
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y +V E+ GT V+ + A D G N++I+Y +R G+ G F
Sbjct: 3231 NPPVFERRDYLVSVPEDTSPGTQVLAVFATSKDI-GTNAEITYLIRSGNEQGKF------ 3283
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+I+P T I V + LD E+ Y L + A D GTP
Sbjct: 3284 ----------RINPKTG----GISVSEALDYELCRKFY-LVVEAKDGGTP 3318
>gi|395520507|ref|XP_003764370.1| PREDICTED: protocadherin Fat 3 isoform 1 [Sarcophilus harrisii]
Length = 4557
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F ID+E
Sbjct: 1038 LHTPYFPDFAVVGSVKENSRIGTSVLQVTARDED-SGRDGEIQYSIRDGSGLGRFNIDDE 1096
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I +LDRE Y LT+ A D+G P
Sbjct: 1097 SGV--------------------IYTADILDRETTG-SYWLTVYATDRGVVP 1127
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF +Y+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 2920 NAPVFGHEMYREQVKESDPPGEVVAVLSTWDEDTSDINQQVSYHITGGNPRGRFAL---- 2975
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 2976 --------------GLVQNEWKVYVKRPLDREEQDV-YFLNITATD 3006
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ VY A + E+ IG VI L A D D P N +I +S+ GD F +D+
Sbjct: 3337 NAPKFNQEVYSAVISEDASIGDSVIVLIAEDVDSPP-NGQIRFSIVSGDRDNEFAVDSVL 3395
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L I V K LDRE GY+L ++A D G P
Sbjct: 3396 GL--------------------IKVKKKLDRERVS-GYSLLIQATDSGIP 3424
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y A V EN L+ ++A D D G+N K+ YS+ G GYF++D+
Sbjct: 3127 NPPIFSSDHYNACVYENTATKALLTRVQATDPD-LGINRKVVYSLADSAG-GYFSVDSSS 3184
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ I++ + LDRE+ YN++++A D+
Sbjct: 3185 GI--------------------IILEQPLDRELQS-SYNISVKASDQS 3211
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F Y+A V E+ P+GT V+++ A+D D G N I+YS+ L +
Sbjct: 468 HTPEFQQPSYEAFVNESVPVGTSVLSVSASDKD-KGENGYITYSIASLSALPF------- 519
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 520 SINQFTGV--------------IRTTEELDFESSPENYRFIVRASDWGSPYRH 558
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 25/109 (22%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI ++A D D PG +ISY++ F ID+ G
Sbjct: 2493 SPAFSQSTYVAEVRENAAPGTKVIHVRATDGD-PGAYGQISYTIINDFAKDRFLIDSNG- 2550
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLT--LRAVDKG 109
++ + LDRE +P+ +++ LRA+D G
Sbjct: 2551 --------------------QVITTERLDRE-SPMEGDISIFLRALDGG 2578
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 17/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ S+ +Y V EN P VI ++A D D N K++Y + G+ +F I
Sbjct: 1144 NAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSS-NEKLTYRITSGNPQNFFVINIKT 1202
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNI-VVLKLLDR 92
D E HF V T D G+ K+ + VV+++LD
Sbjct: 1203 GLITTTSRKLDREQQAEHFLEV-TVTDGGSSPKQSTVWVVVQVLDE 1247
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 37/78 (47%), Gaps = 16/78 (20%)
Query: 37 GMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIA 95
G N +I S S+ GD PL F +V G EY I K +D E
Sbjct: 293 GANGEIESISIVAGD-----------PLEQFLLVK----EGKWINEYKIKERKSIDWESF 337
Query: 96 PLGYNLTLRAVDKGTPPR 113
P GYNLTL+A DKG+P +
Sbjct: 338 PYGYNLTLQAKDKGSPQK 355
Score = 40.0 bits (92), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y A E+ P +++ + A DAD G N I YS+ G +F
Sbjct: 3025 NSPVCDQVAYTALFPEDIPSNKIILKISAKDAD-IGPNGDIRYSLYGSGNNKFF------ 3077
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+DP + + + L LLDRE P+ YNL RA D G
Sbjct: 3078 -----------LDPESGE----LKTLALLDREKIPV-YNLVARATDGG 3109
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D++
Sbjct: 2390 NPPIFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYSILSGNDRTSFLMDSKS 2448
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 24/104 (23%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFRIVPTKI 73
VKE+ P+G ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 735 VKEDMPVGANILKIKAFDAD-SGFNGKVVFTISDGNTDSCFNIDMETGQLK--------- 784
Query: 74 DPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 785 ------------VLMPMDREQTDL-YLLNITIYDLGRPQKSSWR 815
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG----LGYFTI 57
N P F Y+A + E PIGT +I +KA D D G N +++Y++ + F+I
Sbjct: 2810 NKPFFDASSYEAIIMEGMPIGTRLIQVKAIDRD-WGANGQVTYALHSDSSPEKIMEVFSI 2868
Query: 58 D-NEGPLNHFRIVPTKIDP 75
D N G ++ + + + DP
Sbjct: 2869 DSNTGWISTLKDLDHERDP 2887
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 24/116 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG--DGLGYFTIDN 59
N P+F+ Y AT+ E IGT V+ + A+DAD N + Y + + YF ID+
Sbjct: 2283 NPPIFNQPAYNATLSEASLIGTPVLQVVASDADSEN-NKVVQYQIVQDTYNSTDYFHIDS 2341
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
L I+ ++LD E L +RA D G PP +
Sbjct: 2342 TSGL--------------------ILTARMLDHESVQQS-TLKVRATDNGFPPMSS 2376
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y A ++EN+P+GT ++ L D D ++++ G+ F +D G
Sbjct: 3442 NGPVFTPANYTAVIQENKPVGTSILQLMVTDRDSFHNGPPFTFTILAGNEEEEFVLDPHG 3501
Query: 62 PL 63
L
Sbjct: 3502 IL 3503
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F+ +Y+A+V E+ +G+ V+ + A D D G N+++ YS+ G N G
Sbjct: 1562 HSPYFTSPLYEASVFESAALGSAVLQVTALDKD-RGENAELLYSIEAG---------NTG 1611
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F+I P + T KE ++ + + L+++ D+GTPP
Sbjct: 1612 --NTFKIEPI-LGIITVSKEPDMTTMG---------QFVLSIKVTDQGTPP 1650
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---------RGGDGL 52
N P+F Y + E+ IGT +I ++A D D G N +++YSV G+
Sbjct: 827 NRPIFLQESYSVNILESSSIGTEIIQVEARDKD-LGSNGEVTYSVLTDAQQFSINSSTGI 885
Query: 53 GYFT--IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLL 90
Y +D E N+ + + + ++++++V LK+
Sbjct: 886 VYVADQLDRESKANYSLKIEARDRSESGQQQFSVVTLKVF 925
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 47/110 (42%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ GT V+ + A D G N++I+Y +R G+ G F I+
Sbjct: 3232 NPPVFERRDYLVTVPEDTSPGTEVLAVFATSKDI-GTNAEITYLIRSGNERGKFMIN--- 3287
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I V+ LD E+ Y L + A D GTP
Sbjct: 3288 -----------------PKTGGISVIDSLDYEMCKDFY-LVVEAKDGGTP 3319
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ Y++ D G F ID
Sbjct: 933 SPTFIPTSYSVKVLEDLPVGTVIAWLETHDPD-LGLGGQVRYTLV-NDYNGRFEID---- 986
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 987 ----------------KASGAIRLSKELDYEKQQF-YNLTVRAKDKGRP 1018
>gi|395520509|ref|XP_003764371.1| PREDICTED: protocadherin Fat 3 isoform 2 [Sarcophilus harrisii]
Length = 4589
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F ID+E
Sbjct: 1038 LHTPYFPDFAVVGSVKENSRIGTSVLQVTARDED-SGRDGEIQYSIRDGSGLGRFNIDDE 1096
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I +LDRE Y LT+ A D+G P
Sbjct: 1097 SGV--------------------IYTADILDRETTG-SYWLTVYATDRGVVP 1127
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF +Y+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 2920 NAPVFGHEMYREQVKESDPPGEVVAVLSTWDEDTSDINQQVSYHITGGNPRGRFAL---- 2975
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 2976 --------------GLVQNEWKVYVKRPLDREEQDV-YFLNITATD 3006
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ VY A + E+ IG VI L A D D P N +I +S+ GD F +D+
Sbjct: 3337 NAPKFNQEVYSAVISEDASIGDSVIVLIAEDVDSPP-NGQIRFSIVSGDRDNEFAVDSVL 3395
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L I V K LDRE GY+L ++A D G P
Sbjct: 3396 GL--------------------IKVKKKLDRERVS-GYSLLIQATDSGIP 3424
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y A V EN L+ ++A D D G+N K+ YS+ G GYF++D+
Sbjct: 3127 NPPIFSSDHYNACVYENTATKALLTRVQATDPD-LGINRKVVYSLADSAG-GYFSVDSSS 3184
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ I++ + LDRE+ YN++++A D+
Sbjct: 3185 GI--------------------IILEQPLDRELQS-SYNISVKASDQS 3211
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F Y+A V E+ P+GT V+++ A+D D G N I+YS+ L +
Sbjct: 468 HTPEFQQPSYEAFVNESVPVGTSVLSVSASDKD-KGENGYITYSIASLSALPF------- 519
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 520 SINQFTGV--------------IRTTEELDFESSPENYRFIVRASDWGSPYRH 558
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 25/109 (22%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI ++A D D PG +ISY++ F ID+ G
Sbjct: 2493 SPAFSQSTYVAEVRENAAPGTKVIHVRATDGD-PGAYGQISYTIINDFAKDRFLIDSNG- 2550
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLT--LRAVDKG 109
++ + LDRE +P+ +++ LRA+D G
Sbjct: 2551 --------------------QVITTERLDRE-SPMEGDISIFLRALDGG 2578
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 17/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ S+ +Y V EN P VI ++A D D N K++Y + G+ +F I
Sbjct: 1144 NAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSS-NEKLTYRITSGNPQNFFVINIKT 1202
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNI-VVLKLLDR 92
D E HF V T D G+ K+ + VV+++LD
Sbjct: 1203 GLITTTSRKLDREQQAEHFLEV-TVTDGGSSPKQSTVWVVVQVLDE 1247
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 37/78 (47%), Gaps = 16/78 (20%)
Query: 37 GMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIA 95
G N +I S S+ GD PL F +V G EY I K +D E
Sbjct: 293 GANGEIESISIVAGD-----------PLEQFLLVK----EGKWINEYKIKERKSIDWESF 337
Query: 96 PLGYNLTLRAVDKGTPPR 113
P GYNLTL+A DKG+P +
Sbjct: 338 PYGYNLTLQAKDKGSPQK 355
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y A E+ P +++ + A DAD G N I YS+ G +F
Sbjct: 3025 NSPVCDQVAYTALFPEDIPSNKIILKISAKDAD-IGPNGDIRYSLYGSGNNKFF------ 3077
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+DP + + + L LLDRE P+ YNL RA D G
Sbjct: 3078 -----------LDPESGE----LKTLALLDREKIPV-YNLVARATDGG 3109
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D++
Sbjct: 2390 NPPIFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYSILSGNDRTSFLMDSKS 2448
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 24/104 (23%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFRIVPTKI 73
VKE+ P+G ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 735 VKEDMPVGANILKIKAFDAD-SGFNGKVVFTISDGNTDSCFNIDMETGQLK--------- 784
Query: 74 DPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 785 ------------VLMPMDREQTDL-YLLNITIYDLGRPQKSSWR 815
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG----LGYFTI 57
N P F Y+A + E PIGT +I +KA D D G N +++Y++ + F+I
Sbjct: 2810 NKPFFDASSYEAIIMEGMPIGTRLIQVKAIDRD-WGANGQVTYALHSDSSPEKIMEVFSI 2868
Query: 58 D-NEGPLNHFRIVPTKIDP 75
D N G ++ + + + DP
Sbjct: 2869 DSNTGWISTLKDLDHERDP 2887
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 24/116 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG--DGLGYFTIDN 59
N P+F+ Y AT+ E IGT V+ + A+DAD N + Y + + YF ID+
Sbjct: 2283 NPPIFNQPAYNATLSEASLIGTPVLQVVASDADSEN-NKVVQYQIVQDTYNSTDYFHIDS 2341
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
L I+ ++LD E L +RA D G PP +
Sbjct: 2342 TSGL--------------------ILTARMLDHESVQQS-TLKVRATDNGFPPMSS 2376
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y A ++EN+P+GT ++ L D D ++++ G+ F +D G
Sbjct: 3442 NGPVFTPANYTAVIQENKPVGTSILQLMVTDRDSFHNGPPFTFTILAGNEEEEFVLDPHG 3501
Query: 62 PL 63
L
Sbjct: 3502 IL 3503
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F+ +Y+A+V E+ +G+ V+ + A D D G N+++ YS+ G N G
Sbjct: 1562 HSPYFTSPLYEASVFESAALGSAVLQVTALDKD-RGENAELLYSIEAG---------NTG 1611
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F+I P + T KE ++ + + L+++ D+GTPP
Sbjct: 1612 --NTFKIEPI-LGIITVSKEPDMTTMG---------QFVLSIKVTDQGTPP 1650
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---------RGGDGL 52
N P+F Y + E+ IGT +I ++A D D G N +++YSV G+
Sbjct: 827 NRPIFLQESYSVNILESSSIGTEIIQVEARDKD-LGSNGEVTYSVLTDAQQFSINSSTGI 885
Query: 53 GYFT--IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLL 90
Y +D E N+ + + + ++++++V LK+
Sbjct: 886 VYVADQLDRESKANYSLKIEARDRSESGQQQFSVVTLKVF 925
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 47/110 (42%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ GT V+ + A D G N++I+Y +R G+ G F I+
Sbjct: 3232 NPPVFERRDYLVTVPEDTSPGTEVLAVFATSKDI-GTNAEITYLIRSGNERGKFMIN--- 3287
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I V+ LD E+ Y L + A D GTP
Sbjct: 3288 -----------------PKTGGISVIDSLDYEMCKDFY-LVVEAKDGGTP 3319
Score = 35.0 bits (79), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ Y++ D G F ID
Sbjct: 933 SPTFIPTSYSVKVLEDLPVGTVIAWLETHDPD-LGLGGQVRYTLV-NDYNGRFEID---- 986
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 987 ----------------KASGAIRLSKELDYEKQQF-YNLTVRAKDKGRP 1018
>gi|348524466|ref|XP_003449744.1| PREDICTED: protocadherin Fat 1 [Oreochromis niloticus]
Length = 4614
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 22/113 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+F FV + +KE+ IGT V+T+ A D D G + +I YS+R G GLG F+ID E +
Sbjct: 1031 PMFRSFVEKGFIKEDAVIGTSVMTVTAEDEDR-GRDGEIRYSIRDGSGLGVFSIDEETGI 1089
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
I +LLDRE Y LT+ A+D+G P +
Sbjct: 1090 --------------------IRTQELLDRETTS-HYWLTVYAMDRGVVPLSAF 1121
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 59/122 (48%), Gaps = 30/122 (24%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y+A+V EN PIGT V+T+KA D D +G +G ++I N
Sbjct: 458 NAPEFQQTSYKASVDENVPIGTSVVTVKATDLD------------KGENGYVTYSITNVS 505
Query: 62 P----LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
P +++F V I ++LD E+ P YNL +RA D G+P R +
Sbjct: 506 PQPFVIDYFSGV--------------ISTSEVLDYELMPRIYNLKVRASDWGSPYRREVE 551
Query: 118 AT 119
A+
Sbjct: 552 AS 553
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 17 ENQPIGTLV-ITLKAADADPPGMNSKISYSVRGGDG-LGYFTIDNEGPLNHFRIVPTKID 74
E+ P+ T V + AD DP + +G +G + +I PL F+ V T
Sbjct: 251 EHAPVITAVTLAPSDADHDPTYAIVTVEDKDQGPNGEIASLSIVAGDPLQQFKAVRTS-- 308
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
PG++ EY I +K +D + P GYNLTL+A DKG+PP+
Sbjct: 309 PGSR--EYKIKAVKDVDWDSQPFGYNLTLQAKDKGSPPQ 345
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 51/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS VY A + E+ +G V+ + A D D P N + YS+ G+ FTID
Sbjct: 3333 NRPVFSQDVYTAVISEDAELGKTVMAVMAEDFDGPAYN-HVRYSIVAGNQGSPFTID--- 3388
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P + G K V + LDRE GY LT+ A D G PP
Sbjct: 3389 --------PVR---GELK------VARQLDRERTS-GYTLTVVASDNGAPP 3421
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ +GT V+ + AA D N +I+YS+ G+ G F++D
Sbjct: 3228 NPPVFEHREYTATVSEDVAVGTQVLRVHAASRDADA-NGEITYSIISGNEHGMFSVD--- 3283
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K ++ V++ LD E A Y +T+ A D G+PP
Sbjct: 3284 -----------------PKTGDVFVIEPLDYE-ASHEYYITIEATDGGSPP 3316
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 50/111 (45%), Gaps = 25/111 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
N P FS Y TV EN GT V L A D D G+NS I YS V D G+F++D
Sbjct: 3124 NPPQFSSDPYTITVFENTETGTFVAKLSANDLD-TGLNSDILYSLVESAD--GFFSVDES 3180
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ I + + LDRE+ + Y L RA D+G+P
Sbjct: 3181 TGV--------------------ITLERPLDREVQSV-YELKARASDQGSP 3210
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 23/115 (20%)
Query: 4 PVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
P FS+ F VKE+ P+G ++ L A D+D G N K+ Y + GGD +F +D E
Sbjct: 713 PQFSESFPSVIEVKEDLPVGARIVHLNATDSDS-GFNGKLVYVISGGDAESHFIVDMETG 771
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
++V LDRE A Y L + D G P + + +
Sbjct: 772 W--------------------LLVYSPLDRETAD-HYTLNITVYDLGIPQKSSSR 805
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y+AT+ + P GT V+ + A+D D G N+ I YS+ D E
Sbjct: 2593 NAPQFRAGEYKATIASDVPRGTSVVKVAASDTD-EGSNADIEYSIEA---------DAEN 2642
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+F I PT TK+ L L+ E+ Y +RA D G PP+
Sbjct: 2643 VEENFEIHPTSGVIVTKES------LIGLENEL----YAFFVRAKDTGNPPK 2684
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 50/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y V E+ +GT V+ + A D D G N+++ Y + G+ F ID
Sbjct: 1559 NAPWFIGTPYSGRVFESAAVGTAVLQVTALDKD-KGSNAEVVYHIESGNVANSFAID--- 1614
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+ GT I V K LDR + + LT++A D G PP
Sbjct: 1615 PV-----------LGT------ITVAKELDRN-SKTTFELTVKASDNGVPP 1647
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++P FS Y A + EN P+GTLV KA D D G+ +I+Y + F+I+
Sbjct: 2488 FHSPTFSQVDYLAELVENSPVGTLVAEAKATD-DDEGIYGQITYQIINDFAKDKFSINEN 2546
Query: 61 GPL 63
G +
Sbjct: 2547 GEI 2549
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N PVF Y+A V EN P GT VI +KA D D G N +I YS+
Sbjct: 2806 NTPVFEANPYEAVVVENLPSGTQVIQVKAIDQD-SGTNGRIIYSL 2849
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PV VY +V E+ P G L++ + A DAD N++ISY ++G G F ID
Sbjct: 3022 NSPVCDKSVYSESVPEDSPAGRLILQVSATDADIRS-NAQISYELQGV-GSELFIID 3076
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 23/101 (22%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
Y+ V+E+ PIGT+++ L+A D D G +S++ YS+ +G G F +D
Sbjct: 931 YRVKVREDLPIGTVIMWLEAHDPD-IGPSSQVRYSLI-DNGDGNFEVD------------ 976
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT +A DKG P
Sbjct: 977 --------KLSGALRIVQNLDYETKQV-YNLTAKAKDKGKP 1008
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAPVF++ Y+ T+ E P G V ++A+D D N K+ +S+ G+ F I+
Sbjct: 2387 NAPVFTEHTYRTTISELAPRGHFVSQVQASDPDSSDTN-KLQFSIISGNEDQNFAIN 2442
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 24/108 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F Y + E+ P+GT +I + + D D G N + YS+ GG
Sbjct: 817 NSPQFLQESYSVEITESTPVGTEIIQVDSTDKD-QGDNGIVKYSILGG------------ 863
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+HF I + + V K LDRE+ P Y L + A D+
Sbjct: 864 -TDHFAI---------NENTGVVTVTKPLDRELHPF-YVLKISARDQA 900
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 19/93 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVIT-LKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F+ +Y+ TV E+ P + VI L D D +N ++ + + GGD G F I++
Sbjct: 2916 NPPRFTAEIYKGTVSEDDPPPSGVIAILSTTDDDSEDINKQVDFFITGGDPQGQFAIEH- 2974
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
+ E+ + V K LDRE
Sbjct: 2975 -----------------IQNEWKVSVRKPLDRE 2990
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y ++EN+P GT V+ L D D ++++ G+ F I+ +G
Sbjct: 3438 NPPLFSQANYSLIIQENRPAGTSVLQLTVTDRDASHNGPPFTFAIVAGNDGDAFHINQQG 3497
Query: 62 PL 63
L
Sbjct: 3498 AL 3499
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 46/112 (41%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
NAPVF Y A + E IGT V+ + A D+D G N ++ + + G YFTID
Sbjct: 2280 NAPVFLSKTYYANISEASVIGTSVLQVDAKDSD-TGNNQEVFFQLVEERGKSSDYFTIDR 2338
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ I ++LD E + L +R VD G P
Sbjct: 2339 NTGI--------------------ISTAQVLDHE-EIQQHKLRVRVVDGGVP 2369
>gi|334330616|ref|XP_001369584.2| PREDICTED: protocadherin Fat 3 [Monodelphis domestica]
Length = 4557
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F ID+E
Sbjct: 1038 LHTPYFPDFAVVGSVKENSRIGTSVLQVTARDED-SGRDGEIQYSIRDGSGLGRFNIDDE 1096
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I +LDRE Y LT+ A D+G P
Sbjct: 1097 SGV--------------------IYTADILDRETTG-SYWLTVYATDRGVVP 1127
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 2920 NAPVFGHEVYREYVKESDPPGEVVAVLSTWDEDTSDINRQVSYHITGGNPRGRFAL---- 2975
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 2976 --------------GLVQNEWKVYVKRPLDREEQDI-YFLNITATD 3006
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 51/110 (46%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ VY A + E+ IG VI L A D D P N +I +S+ GD DNE
Sbjct: 3337 NAPKFNQEVYSAVISEDASIGDSVIVLIAEDVDSPP-NGQIRFSIVSGDR------DNE- 3388
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
F + P KKK LDRE GY+L ++A D G P
Sbjct: 3389 ----FAVDPVLGLVKVKKK---------LDRERVS-GYSLLIQATDSGVP 3424
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 25/109 (22%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI ++A D D PGM +I Y++ F IDN G
Sbjct: 2493 SPAFSQSTYVAEVRENAAPGTKVIHVRATDGD-PGMYGQIRYAIINDFAKDRFLIDNNG- 2550
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLT--LRAVDKG 109
++ + LDRE +P+ +++ LRA+D G
Sbjct: 2551 --------------------QVITTERLDRE-SPMEGDISIFLRALDGG 2578
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F Y+A V E+ P+GT V+++ A+D D G N I+YS+ + L +
Sbjct: 468 HTPEFQQSSYEAFVNESVPMGTSVLSVSASDKD-KGENGYITYSIASLNALPF------- 519
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 520 SINQFTGV--------------IRTTEELDFESSPENYRFIVRASDWGSPYRH 558
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y + EN L+ ++A D D G+N K+ YS+ G GYF++D+
Sbjct: 3127 NPPIFSSDHYNTCIYENTATKALLTRVQATDPD-LGINRKVVYSLADSAG-GYFSVDSSS 3184
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ I++ + LDRE+ YN++++A D+
Sbjct: 3185 GI--------------------IILEQPLDRELQS-SYNISVKASDQS 3211
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 17/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ S+ +Y V EN P VI ++A D D N K++Y + G+ +F I
Sbjct: 1144 NAPLTSEPIYYPVVMENSPKDISVIQIQAEDPDSSS-NEKLTYRITSGNPQNFFVINIKT 1202
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNI-VVLKLLDR 92
D E HF V T D G+ K+ + VV+++LD
Sbjct: 1203 GLITTTSRKLDREQQAEHFLEV-TVTDGGSSPKQSTVWVVVQVLDE 1247
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y A E+ P +++ + A DAD G N I YS+ G +F
Sbjct: 3025 NSPVCDQVAYTALFPEDIPSNKIILKISAKDAD-IGPNGDIRYSLYGSGNNKFF------ 3077
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+DP + + + L LLDRE P+ YNL RA D G
Sbjct: 3078 -----------LDPESGE----LKTLALLDREKIPV-YNLIARATDGG 3109
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 37/78 (47%), Gaps = 16/78 (20%)
Query: 37 GMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIA 95
G N +I S S+ GD PL F +V G EY I K +D E
Sbjct: 293 GANGEIESISIVAGD-----------PLEQFLLVK----EGKWINEYKIKERKSIDWEGF 337
Query: 96 PLGYNLTLRAVDKGTPPR 113
P GYNLTL+A DKG+P +
Sbjct: 338 PYGYNLTLQAKDKGSPQK 355
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D++
Sbjct: 2390 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYSILSGNDRTSFLMDSKS 2448
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG----LGYFTI 57
N P F Y+A + E P+GT +I +KA D D G N +++Y++ + F+I
Sbjct: 2810 NKPFFDASSYEAIIMEGMPVGTRLIQVKAIDKD-WGANGQVTYALHSDSNAEKVMEVFSI 2868
Query: 58 D-NEGPLNHFRIVPTKIDP 75
D N G ++ + + + DP
Sbjct: 2869 DTNTGWISTLKDLDHERDP 2887
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 24/104 (23%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFRIVPTKI 73
VKE+ P+G ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 735 VKEDLPVGANILKIKAFDAD-SGFNGKVVFTISDGNTDSCFNIDMETGQLK--------- 784
Query: 74 DPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 785 ------------VLMPMDREQTDL-YLLNITIYDLGKPQKSSWR 815
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y A ++EN+P+GT ++ L D D ++++ G+ F +D G
Sbjct: 3442 NGPVFTPANYTAVIQENKPVGTSILQLMVTDRDSFHNGPPFTFTILAGNEEEEFVLDPHG 3501
Query: 62 PL 63
L
Sbjct: 3502 IL 3503
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 47/116 (40%), Gaps = 24/116 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG--DGLGYFTIDN 59
N P+F Y AT+ E IGT V+ + A+DAD N + Y + + YF ID+
Sbjct: 2283 NPPIFDQPTYNATLSEASLIGTPVLQVVASDADSEN-NKIVQYQIVQDTYNSTDYFHIDS 2341
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
L I+ ++LD E L +RA D G PP +
Sbjct: 2342 TSGL--------------------ILTARMLDHESVQQS-TLKVRATDNGFPPMSS 2376
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 48/110 (43%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ GT V+ + A D G N++I+Y +R G+ G F I+
Sbjct: 3232 NPPVFERRDYLVTVPEDTTPGTEVLAVFATSKDI-GTNAEITYLIRSGNERGKFKIN--- 3287
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I V++ LD E+ Y L + A D GTP
Sbjct: 3288 -----------------LKTGGISVIEALDYEMCKDFY-LVVEAKDGGTP 3319
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F ID
Sbjct: 933 SPTFIPTSYSVKVLEDLPVGTVIAWLETHDPD-LGLGGQVRYSLV-NDYNGRFEID---- 986
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 987 ----------------KASGAIRLSKELDYEKQQF-YNLTVRAKDKGRP 1018
>gi|338713124|ref|XP_001917610.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2-like [Equus
caballus]
Length = 4351
Score = 59.7 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/112 (36%), Positives = 58/112 (51%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ FV+Q V+EN P GT V+ + A D D G++ ++ YS+R G GL F+ID
Sbjct: 1027 LHPPRFASFVHQGQVQENSPSGTQVMGVTAHD-DDSGLDGELQYSLRAGTGLAAFSIDQ- 1084
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
D G I+ L LDRE Y LT++AVD G+ P
Sbjct: 1085 -------------DTGV------ILTLAPLDREFVSC-YWLTVQAVDSGSVP 1116
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/109 (36%), Positives = 53/109 (48%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F +Y V EN +G LV+T+ A D D P +NS I+YS+ GG+ LG+FTI
Sbjct: 3321 PRFLQDLYSTRVLENAVVGDLVLTVSATDEDGP-VNSAITYSLVGGNQLGHFTI------ 3373
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+ + V K LD E Y+L +RA D G PP
Sbjct: 3374 --------------HPKKGELKVAKALDWEQTS-SYSLRVRATDNGRPP 3407
Score = 42.0 bits (97), Expect = 0.078, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP+F+ Y+ T EN P GT V+T+ A D D G N ++YS+
Sbjct: 454 HAPIFNRSSYEGTFDENIPPGTSVLTVTATDRD-HGENGYVTYSIA-------------- 498
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+ VP IDP I K +D E+ Y +RA D G+P R+
Sbjct: 499 ---RPKSVPFSIDPYLGI----ISTSKPMDYELMKRIYTFRVRASDWGSPFRQ 544
Score = 41.6 bits (96), Expect = 0.100, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y+ +V EN G V TLK DAD N +++ + GD LG F I G
Sbjct: 2904 NAPQFASEDYRGSVVENSEPGEPVATLKTLDADVSEQNRQVTCYITEGDPLGQFGISQVG 2963
Query: 62 PLNHFRIVPTK 72
+ +RI K
Sbjct: 2964 --DEWRIFSRK 2972
Score = 38.5 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y +V+EN P+G+ V+ L +D D P S+ + G+ F + +G
Sbjct: 3424 NPPRFFQLNYSTSVQENSPVGSKVLQLILSDPDSPENGPPYSFRITKGNDASAFHVTPDG 3483
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLR 104
L + ++ +E+ + +++ D I PL + ++R
Sbjct: 3484 WLVTMAGLSRRV------QEWYQLQIEVSDSGIPPLSSSTSVR 3520
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 48/113 (42%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P FS VY ++ E P T VI L A D D G N +SY + G D +F I+
Sbjct: 2268 NPPTFSQSVYTTSISEGLPAQTPVIQLLAFDQD-SGQNRDVSYQIVEDGSDVSKFFQING 2326
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ ++ LD E A +++ +RA+D+G PP
Sbjct: 2327 STG--------------------EMSTVQELDYE-AQQHFHVKVRAMDRGDPP 2358
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N+P S V+ +V+E+ P+ T V+ L A D D K+++++ GG+ +G+F +
Sbjct: 1133 NSPRMSRPVFYPSVREDAPLYTSVLQLDAWDPDSSS-KGKLTFNITGGNHMGFFVV 1187
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTID 58
N P+F Y+A + EN P+GT VI + A D D G + ++SY + G + F ID
Sbjct: 2795 NRPIFEADPYKAVLTENMPVGTTVIQVTANDQD-TGNDGQVSYRLPVDPGSNIHELFAID 2853
Query: 59 NE 60
+E
Sbjct: 2854 SE 2855
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++ P F+ Y+ V + GT ++ ++A D D G N+++ YS+ G+ G+F ID
Sbjct: 1550 LHPPRFTQLHYETNVTDTTAPGTELLQVRAMDGDR-GDNAEVHYSLLKGNSEGFFNID 1606
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 53/124 (42%), Gaps = 27/124 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQ T+ E+ IGT + LKA DAD N ++ Y++
Sbjct: 816 NAPRFPPGGYQVTISEDTEIGTTIAELKAKDADSED-NGRVRYTLL-------------S 861
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
P + F + P + +VV LDRE P Y L + A D+ PR+ ++
Sbjct: 862 PTDKFSLHPLTGE---------LVVTGHLDRESEP-QYILKVEARDQ---PRKGHQLFSV 908
Query: 122 NGLT 125
LT
Sbjct: 909 TDLT 912
>gi|12621132|ref|NP_075243.1| protocadherin Fat 2 precursor [Rattus norvegicus]
gi|22095688|sp|O88277.1|FAT2_RAT RecName: Full=Protocadherin Fat 2; AltName: Full=Multiple epidermal
growth factor-like domains protein 1; Short=Multiple
EGF-like domains protein 1; Flags: Precursor
gi|3449286|dbj|BAA32458.1| MEGF1 [Rattus norvegicus]
Length = 4351
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+++P FS FVYQ V+EN P GT V+ + A D D G++ ++ Y +R G GL F+I+ +
Sbjct: 1027 LHSPHFSSFVYQGQVQENSPAGTPVMVVTAQD-DDSGLDGELQYFLRAGTGLETFSINQD 1085
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ + L LDRE P Y LT+ AVD+G+ P
Sbjct: 1086 TGM--------------------LETLAPLDREFTPY-YWLTVLAVDRGSVP 1116
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 40/109 (36%), Positives = 57/109 (52%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y V EN +G +++T+ A+D D P +NS I+YS+ GG+ LG+FTI+
Sbjct: 3321 PRFTHDLYTVRVLENAVVGDVILTVSASDDDGP-VNSAITYSLVGGNQLGHFTIN----- 3374
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+ + V K LD E P Y+L LRA D G PP
Sbjct: 3375 ---------------PKKGKLQVAKALDWEQTP-SYSLRLRATDSGQPP 3407
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 52/113 (46%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+APVF+ Y+ T+ EN P GT V+T+ A D D G N I+YS+ G
Sbjct: 454 HAPVFNRSSYEGTLDENIPPGTSVLTVTATDQD-HGDNGHITYSIAGP------------ 500
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+ VP IDP I K +D E+ Y +RA D G+P R+
Sbjct: 501 -----KAVPFSIDPLLGV----ISTTKPMDYELMKRIYTFRVRASDWGSPFRQ 544
Score = 43.5 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 32/60 (53%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+ +V EN G LV TLK DAD N +++ + GD LG F+I G
Sbjct: 2904 NPPRFASEDYRGSVVENNEPGELVATLKTLDADVSDQNRQVTCYITEGDPLGQFSISQVG 2963
Score = 42.0 bits (97), Expect = 0.073, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 47/113 (41%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P FS VY +V E P T VI L A+D D G N +SY + G D +F I+
Sbjct: 2268 NPPTFSQLVYTTSVSEGSPAQTPVIQLLASDQD-SGQNQDVSYQIVEDGSDVSKFFRING 2326
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I ++ LD E + + +RA+DKG PP
Sbjct: 2327 STG--------------------EIFTIQELDYETHQ-HFRVKVRAMDKGDPP 2358
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
+++P F+ Y+A V + GT ++ ++A DAD G N++I YS G+ G+F ID+
Sbjct: 1550 LHSPHFTQLRYEANVPDTTAPGTELLQVRAVDAD-RGANAEIHYSFLKGNSDGFFNIDS 1607
Score = 36.2 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N P S V+ +V E+ P+GT V+ L+A D D K+++++ G+ LG+F +
Sbjct: 1133 NIPSMSRPVFYPSVLEDAPLGTSVLQLEAWDPDSSS-QGKLTFNLTSGNHLGHFIV 1187
Score = 35.4 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY--SVRGGDGLG-YFTID 58
N PVF Y+A + EN P GT VI + A D D G + ++SY SV G + F +D
Sbjct: 2795 NRPVFEADPYKAFLTENMPGGTTVIQVTANDQD-TGSDGQVSYRLSVEPGSNIHELFAVD 2853
Query: 59 NE 60
+E
Sbjct: 2854 SE 2855
Score = 35.0 bits (79), Expect = 10.0, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P S +Y V+E+ G ++ + A D D N++I+YS+ G +
Sbjct: 3009 NSPQCSQLLYTGKVREDVTPGHFILKVSAIDVD-MDTNAQITYSLHGPGAQEF------- 3060
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
K+DP T + + L +LDRE + YNL +A D G
Sbjct: 3061 ----------KLDPHTGE----LTTLTVLDRERKDV-YNLVAKATDGG 3093
>gi|297712778|ref|XP_002832907.1| PREDICTED: protocadherin Fat 2-like, partial [Pongo abelii]
Length = 524
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 54/109 (49%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y V EN +G +++T+ A D D P +NS I+YS+ GG+ LG+FTI
Sbjct: 278 PQFPQDPYSTRVLENALVGDVILTVSATDEDGP-LNSDITYSLVGGNQLGHFTI------ 330
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+ + V K LDRE A Y+L LRA D G PP
Sbjct: 331 --------------HPKKGELQVAKALDREQAS-SYSLKLRATDSGQPP 364
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 46/111 (41%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y TV+EN PIG+ V+ L +D D P S+ + G N G
Sbjct: 381 NPPRFFQLNYSTTVQENSPIGSKVLQLILSDLDSPENGPPYSFRITKG---------NNG 431
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ FR+ P +V + L R A Y L ++A D G PP
Sbjct: 432 SV--FRVTPDGW----------LVTAEGLSRR-AQEWYQLQIQASDSGIPP 469
>gi|124249105|ref|NP_001074283.1| protocadherin Fat 3 precursor [Mus musculus]
Length = 4551
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 52/112 (46%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F ID+E
Sbjct: 1033 LHTPYFPDFAVVGSVKENSRIGTSVLQVTAHDED-SGRDGEIQYSIRDGSGLGRFNIDDE 1091
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I LDRE Y LT+ A D+G P
Sbjct: 1092 SGV--------------------ITAADSLDRETTA-SYWLTVYATDRGVVP 1122
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 2915 NAPVFAHEVYRGNVKESDPPGEVVAVLSTLDKDTSNINRQVSYHITGGNPRGQFAL---- 2970
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 2971 --------------GMVQSEWKVYVKRPLDREEQDI-YFLNITASD 3001
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 25/109 (22%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI ++A D D PG ++SYS+ F ID+ G
Sbjct: 2488 SPAFSQSTYVAEVRENAASGTKVIHVRATDGD-PGTYGQVSYSIINDFAKDRFLIDSNG- 2545
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLT--LRAVDKG 109
I+ + LDRE PL +++ LRA+D G
Sbjct: 2546 --------------------QIITTERLDRE-NPLEGDISIYLRALDGG 2573
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS VY A + E+ G VI L A D D N +I +S+ GGD F +D
Sbjct: 3332 NPPRFSQDVYSAVISEDALEGDSVILLIAEDVDSKP-NGQIRFSIVGGDRDNEFAVD--- 3387
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P+ +V K K LDRE GY+L ++AVD G P
Sbjct: 3388 PI--LGLVKVK---------------KKLDRERVS-GYSLLIQAVDSGIP 3419
Score = 43.1 bits (100), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 17/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ S+ +Y V EN P VI ++A D D G N K++Y + G+ +F I
Sbjct: 1139 NAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPD-SGSNEKLTYRITSGNPQNFFAINIKT 1197
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNI-VVLKLLDR 92
D E HF V T D G+ K+ I VV+++LD
Sbjct: 1198 GLITTTSRKLDREQQAEHFLEV-TVTDGGSSPKQSTIWVVVQVLDE 1242
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 51/114 (44%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ +GT V+++ A D G N++I+Y +R G+ G F+I+
Sbjct: 3227 NPPVFERRDYLVTVPEDTSLGTQVLSVFATSKD-IGTNAEITYLIRSGNEQGKFSIN--- 3282
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
K I VL+ LD E Y L + A D GTP T
Sbjct: 3283 -----------------PKTGGISVLEALDYETCRRFY-LVVEAKDGGTPALST 3318
Score = 41.6 bits (96), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y A++ E+ P +++ + A DAD G N I YS+ G +F
Sbjct: 3020 NSPVCDQVAYSASLPEDIPSNKIILKVSAKDAD-IGSNGDIRYSLYGSGNNEFF------ 3072
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+DP + + + L +LDRE P+ YNL RA D G
Sbjct: 3073 -----------LDPESGE----LKTLAVLDRERVPV-YNLIARATDGG 3104
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D S+S+ G+ F +D+ G
Sbjct: 3437 NSPVFTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPPFSFSILSGNEDEEFMLDSHG 3496
Query: 62 PL 63
L
Sbjct: 3497 IL 3498
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y++ V E P G V ++A+DAD ++ ++ YS+ G+ F +D++
Sbjct: 2385 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDLD-RLEYSILSGNDRASFLMDSKS 2443
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F + +Y+ V E+ +GT V+T+ A+D D G N I+YS+ + L +
Sbjct: 463 HTPEFQEALYETFVNESVRVGTNVLTVSASDKD-KGENGYITYSIASLNLLPF------- 514
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 515 AINQFTGV--------------ISTTEELDFESSPETYRFIVRASDWGSPYRH 553
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A V EN L+ ++A D D G+N K+ YS+ G F+ID+
Sbjct: 3122 NPPVFSSNHYTACVYENTATKALLTRVQAMDPD-VGINRKVVYSLEDS-ASGVFSIDSSS 3179
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ IV+ + LDRE YN+++RA D+
Sbjct: 3180 GV--------------------IVLEQPLDRE-QQSSYNISVRATDQS 3206
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 25/120 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVF Y A V+ + GTL+ + A D D G N +++Y ++ D G+F I+ N
Sbjct: 2075 NSPVFVGLPYYAAVQVDAEPGTLIYRVTAIDKD-KGANGEVTYVLQ--DDYGHFEINPNS 2131
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
G N+++ + + +++ + Y +T+ A D G P T+ P
Sbjct: 2132 G---------------------NVILREAFNSDLSNIDYGVTILAKDGGNPSLSTFVELP 2170
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F++ +Y+A+V E+ +G++V+ + A D D G N+++ YS+ G N G
Sbjct: 1557 HSPYFTNPLYEASVFESAALGSVVLQVTALDKD-KGENAELIYSIEAG---------NTG 1606
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVDKGTPP 112
N F+I P + T KE ++A +G + L+++ D+G+PP
Sbjct: 1607 --NTFKIEPV-LGIITISKE----------PDMAAMGQFVLSVKVTDQGSPP 1645
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL----GYFTI 57
N PVF Y+ + E P+GT + ++A D D G N +++YS+ L F I
Sbjct: 2805 NKPVFETSTYETIIMEGMPVGTKLAQVRAIDMD-WGANGQVTYSLHSDSHLEKVIEAFNI 2863
Query: 58 D-NEGPLNHFRIVPTKIDPG 76
D N G ++ + + + DP
Sbjct: 2864 DSNTGWISTLKDLDHETDPA 2883
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 24/110 (21%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFR 67
F VKE+ +GT ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 724 FPSDVAVKEDMLVGTNILKIKAYDAD-SGFNGKVLFTISDGNTDSCFNIDMETGQLK--- 779
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 780 ------------------VLMPMDREHTDL-YVLNITIYDLGKPQKSSWR 810
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F +D
Sbjct: 928 SPAFIPSSYSVKVLEDLPVGTVIAWLETQDPD-LGLGGQVRYSLV-NDYNGRFEVD---- 981
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 982 ----------------KASGAIRLSKELDYEKQQF-YNLTVRAKDKGRP 1013
Score = 35.4 bits (80), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 12/100 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---------RGGDGL 52
N PVF Y ++ E+ IGT +I ++A D D G N ++ YSV G+
Sbjct: 822 NNPVFLQDSYSVSILESSSIGTEIIQVEARDKD-LGSNGEVMYSVLTDTHQFIINSSTGI 880
Query: 53 GYFT--IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLL 90
Y +D E N+ + + + ++ +++V LK+
Sbjct: 881 VYIADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKIF 920
>gi|327269193|ref|XP_003219379.1| PREDICTED: protocadherin Fat 3-like [Anolis carolinensis]
Length = 4553
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 51/109 (46%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P FSDF +VKEN IGT V+ + A D D G + +I YSVR G GLG F ID E +
Sbjct: 1037 PYFSDFAVIGSVKENARIGTSVLQVTARD-DDNGRDGEIQYSVRDGSGLGRFNIDEETGV 1095
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I +LDRE Y LT+ A D+G P
Sbjct: 1096 --------------------IYTADILDRETTQ-SYWLTVYATDRGVVP 1123
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 51/110 (46%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS VY A + E+ +G +ITL A D D P N +I +S+ GD F+ID
Sbjct: 3333 NAPRFSQEVYSAVISEDASVGDSLITLIAEDLDSPP-NGQIHFSIINGDRNNEFSIDPSL 3391
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L I V K LDRE GY+L ++A D G P
Sbjct: 3392 GL--------------------IKVKKRLDRERIS-GYSLVIQARDSGIP 3420
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 53/109 (48%), Gaps = 25/109 (22%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+PVFS +Y A V+EN GT VI +KA D D G+ +ISYS+ F IDN G
Sbjct: 2489 SPVFSQSIYVAEVRENSLPGTKVIHVKATDGD-AGIYGQISYSIINDFAKDRFLIDNNG- 2546
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLT--LRAVDKG 109
I+ + LDREI PL ++T LRA+D G
Sbjct: 2547 --------------------QIITTEKLDREI-PLEGDITIFLRALDGG 2574
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF +Y+ TVKE+ G +V L D D +N ++SY + GG+ G
Sbjct: 2916 NAPVFEHDMYRGTVKESDSPGEVVAVLSTWDEDTSDINRQVSYHITGGNPKG-------- 2967
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
K D G + E+ + V + LDRE + Y L + A D
Sbjct: 2968 ----------KFDLGLVQNEWKVYVKRPLDREEQDV-YLLNITATD 3002
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+PIGT ++ L D D ++S+ G+ G FT+D +G
Sbjct: 3438 NSPVFTPANYTAVIQENKPIGTSILQLVVTDKDSLHNGPPFTFSILAGNEEGEFTLDQQG 3497
Query: 62 PL 63
L
Sbjct: 3498 IL 3499
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 47/113 (41%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG--DGLGYFTIDN 59
NAPVF F Y AT+ E IGT V+ + A DAD N I Y + + YF ID
Sbjct: 2279 NAPVFEHFAYNATLSEGSLIGTPVLQVIATDADSEN-NKIIQYQIVQDTFNSTDYFHIDG 2337
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L I+ +LLD E+ L +RA D G PP
Sbjct: 2338 SSGL--------------------ILTARLLDHELMQQCI-LKVRATDNGFPP 2369
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 25/109 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y A V EN L+ ++A D D G+N KI YS+ G+F++D
Sbjct: 3123 NPPMFSSDHYTACVYENTATKALLTRVQANDPD-VGVNRKIVYSL-ADSSEGFFSVD--- 3177
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKL-LDREIAPLGYNLTLRAVDKG 109
K I++L+ LDRE+ P YN+T++A D+G
Sbjct: 3178 ------------------KSSGIIILEHPLDRELQP-SYNVTIKASDQG 3207
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS----VRGGDGLGYFTI 57
N PVF Y+A + E PIGT ++ +KA DAD G N +++YS V FTI
Sbjct: 2806 NKPVFESASYEAIIMEGMPIGTKLVQVKATDAD-WGANGQVTYSLLAEVEADRITEVFTI 2864
Query: 58 D-NEGPLNHFRIVPTKIDP 75
D N G ++ + + + +P
Sbjct: 2865 DSNSGWISTLKDLDHERNP 2883
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
PL HF++ G EY I K +D + P GYNLTL+A DKG+P +
Sbjct: 304 PLEHFQLAK----EGRWMNEYKIKEKKPIDWDSFPYGYNLTLQAKDKGSPQK 351
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 17/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ S+ +Y +V EN P VI ++A D D N K++Y + G+ +F I
Sbjct: 1140 NAPLTSEPIYYPSVMENSPKDVSVIQIQAQDPDST-TNEKMTYRITSGNPQNFFIINTKT 1198
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNI-VVLKLLDR 92
D E HF V T D GT K+ + +V+++LD
Sbjct: 1199 GLITTTSRKLDREQQAEHFLEV-TVTDGGTSPKQSTVWLVIQVLDE 1243
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 24/112 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ Y + V E+ P+GT ++++ A D D G N I+YS+ + L + +
Sbjct: 466 PEFTQPSYSSYVNESVPVGTTILSVSAFDKD-RGENGYITYSIASLNSLPF-------SI 517
Query: 64 NHFR-IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
N F I+ T + LD E +P Y +RA D G+P R
Sbjct: 518 NQFTGIISTS---------------EELDFESSPESYRFIVRASDWGSPYRH 554
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D++
Sbjct: 2386 NPPIFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYSILSGNDRTSFVMDSKS 2444
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 22/105 (20%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
+V+E+ P+G + +KA D D G N K+ Y++ G+ F ++ E L
Sbjct: 729 VSVREDLPVGATIFRIKAYDVD-SGFNGKVLYTISDGNVDSCFNLEMETGL--------- 778
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ VL LDRE L Y L + D GTP + T++
Sbjct: 779 -----------LKVLLPLDREKTEL-YLLNITIYDLGTPQKATWR 811
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F+ +Y+A+V E+ IG+ V+ + A D D G N+++ Y++ G+ F I+
Sbjct: 1558 HSPYFTSPLYEASVFESAAIGSAVLQVTALDKD-KGENAELIYTIESGNTGNTFKIE--- 1613
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLR---AVDKGTPPRETYK 117
P+ I+ +P ++ +K+ D+ PL +R + + P+ T+K
Sbjct: 1614 PV--LGIITVLKEPDLTAMNQFVLSVKVSDQGSPPLSATAIVRISVTMSDNSHPKFTHK 1670
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F ID
Sbjct: 929 SPAFIPPSYSVKVLEDLPVGTVIAWLETQDPD-LGLGGQVRYSLV-NDYNGKFEID---- 982
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 983 ----------------KASGAIRLSKELDYEKQQF-YNLTVRAKDKGRP 1014
>gi|148693090|gb|EDL25037.1| mCG142133 [Mus musculus]
Length = 4539
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 52/112 (46%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F ID+E
Sbjct: 1021 LHTPYFPDFAVVGSVKENSRIGTSVLQVTAHDED-SGRDGEIQYSIRDGSGLGRFNIDDE 1079
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I LDRE Y LT+ A D+G P
Sbjct: 1080 SGV--------------------ITAADSLDRETTA-SYWLTVYATDRGVVP 1110
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 2903 NAPVFAHEVYRGNVKESDPPGEVVAVLSTLDKDTSNINRQVSYHITGGNPRGQFAL---- 2958
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 2959 --------------GMVQSEWKVYVKRPLDREEQDI-YFLNITASD 2989
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 25/109 (22%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI ++A D D PG ++SYS+ F ID+ G
Sbjct: 2476 SPAFSQSTYVAEVRENAASGTKVIHVRATDGD-PGTYGQVSYSIINDFAKDRFLIDSNG- 2533
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLT--LRAVDKG 109
I+ + LDRE PL +++ LRA+D G
Sbjct: 2534 --------------------QIITTERLDRE-NPLEGDISIYLRALDGG 2561
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS VY A + E+ G VI L A D D N +I +S+ GGD F +D
Sbjct: 3320 NPPRFSQDVYSAVISEDALEGDSVILLIAEDVDSKP-NGQIRFSIVGGDRDNEFAVD--- 3375
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P+ +V K K LDRE GY+L ++AVD G P
Sbjct: 3376 PI--LGLVKVK---------------KKLDRERVS-GYSLLIQAVDSGIP 3407
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 17/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ S+ +Y V EN P VI ++A D D G N K++Y + G+ +F I
Sbjct: 1127 NAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPD-SGSNEKLTYRITSGNPQNFFAINIKT 1185
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNI-VVLKLLDR 92
D E HF V T D G+ K+ I VV+++LD
Sbjct: 1186 GLITTTSRKLDREQQAEHFLEV-TVTDGGSSPKQSTIWVVVQVLDE 1230
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 51/114 (44%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ +GT V+++ A D G N++I+Y +R G+ G F+I+
Sbjct: 3215 NPPVFERRDYLVTVPEDTSLGTQVLSVFATSKD-IGTNAEITYLIRSGNEQGKFSIN--- 3270
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
K I VL+ LD E Y L + A D GTP T
Sbjct: 3271 -----------------PKTGGISVLEALDYETCRRFY-LVVEAKDGGTPALST 3306
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y A++ E+ P +++ + A DAD G N I YS+ G +F
Sbjct: 3008 NSPVCDQVAYSASLPEDIPSNKIILKVSAKDAD-IGSNGDIRYSLYGSGNNEFF------ 3060
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+DP + + + L +LDRE P+ YNL RA D G
Sbjct: 3061 -----------LDPESGE----LKTLAVLDRERVPV-YNLIARATDGG 3092
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D S+S+ G+ F +D+ G
Sbjct: 3425 NSPVFTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPPFSFSILSGNEDEEFMLDSHG 3484
Query: 62 PL 63
L
Sbjct: 3485 IL 3486
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y++ V E P G V ++A+DAD ++ ++ YS+ G+ F +D++
Sbjct: 2373 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDLD-RLEYSILSGNDRASFLMDSKS 2431
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F + +Y+ V E+ +GT V+T+ A+D D G N I+YS+ + L +
Sbjct: 451 HTPEFQEALYETFVNESVRVGTNVLTVSASDKD-KGENGYITYSIASLNLLPF------- 502
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 503 AINQFTGV--------------ISTTEELDFESSPETYRFIVRASDWGSPYRH 541
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A V EN L+ ++A D D G+N K+ YS+ G F+ID+
Sbjct: 3110 NPPVFSSNHYTACVYENTATKALLTRVQAMDPD-VGINRKVVYSLEDS-ASGVFSIDSSS 3167
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ IV+ + LDRE YN+++RA D+
Sbjct: 3168 GV--------------------IVLEQPLDRE-QQSSYNISVRATDQS 3194
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 25/120 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVF Y A V+ + GTL+ + A D D G N +++Y ++ D G+F I+ N
Sbjct: 2063 NSPVFVGLPYYAAVQVDAEPGTLIYRVTAIDKD-KGANGEVTYVLQ--DDYGHFEINPNS 2119
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
G N+++ + + +++ + Y +T+ A D G P T+ P
Sbjct: 2120 G---------------------NVILREAFNSDLSNIDYGVTILAKDGGNPSLSTFVELP 2158
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F++ +Y+A+V E+ +G++V+ + A D D G N+++ YS+ G N G
Sbjct: 1545 HSPYFTNPLYEASVFESAALGSVVLQVTALDKD-KGENAELIYSIEAG---------NTG 1594
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVDKGTPP 112
N F+I P + T KE ++A +G + L+++ D+G+PP
Sbjct: 1595 --NTFKIEPV-LGIITISKE----------PDMAAMGQFVLSVKVTDQGSPP 1633
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL----GYFTI 57
N PVF Y+ + E P+GT + ++A D D G N +++YS+ L F I
Sbjct: 2793 NKPVFETSTYETIIMEGMPVGTKLAQVRAIDMD-WGANGQVTYSLHSDSHLEKVIEAFNI 2851
Query: 58 D-NEGPLNHFRIVPTKIDPG 76
D N G ++ + + + DP
Sbjct: 2852 DSNTGWISTLKDLDHETDPA 2871
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 24/110 (21%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFR 67
F VKE+ +GT ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 712 FPSDVAVKEDMLVGTNILKIKAYDAD-SGFNGKVLFTISDGNTDSCFNIDMETGQLK--- 767
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 768 ------------------VLMPMDREHTDL-YVLNITIYDLGKPQKSSWR 798
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F +D
Sbjct: 916 SPAFIPSSYSVKVLEDLPVGTVIAWLETQDPD-LGLGGQVRYSLV-NDYNGRFEVD---- 969
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 970 ----------------KASGAIRLSKELDYEKQQF-YNLTVRAKDKGRP 1001
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 12/100 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---------RGGDGL 52
N PVF Y ++ E+ IGT +I ++A D D G N ++ YSV G+
Sbjct: 810 NNPVFLQDSYSVSILESSSIGTEIIQVEARDKD-LGSNGEVMYSVLTDTHQFIINSSTGI 868
Query: 53 GYFT--IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLL 90
Y +D E N+ + + + ++ +++V LK+
Sbjct: 869 VYIADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKIF 908
>gi|172046767|sp|Q8BNA6.2|FAT3_MOUSE RecName: Full=Protocadherin Fat 3; AltName: Full=FAT tumor suppressor
homolog 3; Flags: Precursor
Length = 4555
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 52/112 (46%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F ID+E
Sbjct: 1037 LHTPYFPDFAVVGSVKENSRIGTSVLQVTAHDED-SGRDGEIQYSIRDGSGLGRFNIDDE 1095
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I LDRE Y LT+ A D+G P
Sbjct: 1096 SGV--------------------ITAADSLDRETTA-SYWLTVYATDRGVVP 1126
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 2919 NAPVFAHEVYRGNVKESDPPGEVVAVLSTLDKDTSNINRQVSYHITGGNPRGQFAL---- 2974
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 2975 --------------GMVQSEWKVYVKRPLDREEQDI-YFLNITASD 3005
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 25/109 (22%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI ++A D D PG ++SYS+ F ID+ G
Sbjct: 2492 SPAFSQSTYVAEVRENAASGTKVIHVRATDGD-PGTYGQVSYSIINDFAKDRFLIDSNG- 2549
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLT--LRAVDKG 109
I+ + LDRE PL +++ LRA+D G
Sbjct: 2550 --------------------QIITTERLDRE-NPLEGDISIYLRALDGG 2577
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS VY A + E+ G VI L A D D N +I +S+ GGD F +D
Sbjct: 3336 NPPRFSQDVYSAVISEDALEGDSVILLIAEDVDSKP-NGQIRFSIVGGDRDNEFAVD--- 3391
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P+ +V K K LDRE GY+L ++AVD G P
Sbjct: 3392 PI--LGLVKVK---------------KKLDRERVS-GYSLLIQAVDSGIP 3423
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 17/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ S+ +Y V EN P VI ++A D D G N K++Y + G+ +F I
Sbjct: 1143 NAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPD-SGSNEKLTYRITSGNPQNFFAINIKT 1201
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNI-VVLKLLDR 92
D E HF V T D G+ K+ I VV+++LD
Sbjct: 1202 GLITTTSRKLDREQQAEHFLEV-TVTDGGSSPKQSTIWVVVQVLDE 1246
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 51/114 (44%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ +GT V+++ A D G N++I+Y +R G+ G F+I+
Sbjct: 3231 NPPVFERRDYLVTVPEDTSLGTQVLSVFATSKD-IGTNAEITYLIRSGNEQGKFSIN--- 3286
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
K I VL+ LD E Y L + A D GTP T
Sbjct: 3287 -----------------PKTGGISVLEALDYETCRRFY-LVVEAKDGGTPALST 3322
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y A++ E+ P +++ + A DAD G N I YS+ G +F
Sbjct: 3024 NSPVCDQVAYSASLPEDIPSNKIILKVSAKDAD-IGSNGDIRYSLYGSGNNEFF------ 3076
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+DP + + + L +LDRE P+ YNL RA D G
Sbjct: 3077 -----------LDPESGE----LKTLAVLDRERVPV-YNLIARATDGG 3108
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D S+S+ G+ F +D+ G
Sbjct: 3441 NSPVFTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPPFSFSILSGNEDEEFMLDSHG 3500
Query: 62 PL 63
L
Sbjct: 3501 IL 3502
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y++ V E P G V ++A+DAD ++ ++ YS+ G+ F +D++
Sbjct: 2389 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDLD-RLEYSILSGNDRASFLMDSKS 2447
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F + +Y+ V E+ +GT V+T+ A+D D G N I+YS+ + L +
Sbjct: 467 HTPEFQEALYETFVNESVRVGTNVLTVSASDKD-KGENGYITYSIASLNLLPF------- 518
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 519 AINQFTGV--------------ISTTEELDFESSPETYRFIVRASDWGSPYRH 557
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A V EN L+ ++A D D G+N K+ YS+ G F+ID+
Sbjct: 3126 NPPVFSSNHYTACVYENTATKALLTRVQAMDPD-VGINRKVVYSLEDS-ASGVFSIDSSS 3183
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ IV+ + LDRE YN+++RA D+
Sbjct: 3184 GV--------------------IVLEQPLDRE-QQSSYNISVRATDQS 3210
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 25/120 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVF Y A V+ + GTL+ + A D D G N +++Y ++ D G+F I+ N
Sbjct: 2079 NSPVFVGLPYYAAVQVDAEPGTLIYRVTAIDKD-KGANGEVTYVLQ--DDYGHFEINPNS 2135
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
G N+++ + + +++ + Y +T+ A D G P T+ P
Sbjct: 2136 G---------------------NVILREAFNSDLSNIDYGVTILAKDGGNPSLSTFVELP 2174
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F++ +Y+A+V E+ +G++V+ + A D D G N+++ YS+ G N G
Sbjct: 1561 HSPYFTNPLYEASVFESAALGSVVLQVTALDKD-KGENAELIYSIEAG---------NTG 1610
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVDKGTPP 112
N F+I P + T KE ++A +G + L+++ D+G+PP
Sbjct: 1611 --NTFKIEPV-LGIITISKE----------PDMAAMGQFVLSVKVTDQGSPP 1649
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL----GYFTI 57
N PVF Y+ + E P+GT + ++A D D G N +++YS+ L F I
Sbjct: 2809 NKPVFETSTYETIIMEGMPVGTKLAQVRAIDMD-WGANGQVTYSLHSDSHLEKVIEAFNI 2867
Query: 58 D-NEGPLNHFRIVPTKIDPG 76
D N G ++ + + + DP
Sbjct: 2868 DSNTGWISTLKDLDHETDPA 2887
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 24/110 (21%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFR 67
F VKE+ +GT ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 728 FPSDVAVKEDMLVGTNILKIKAYDAD-SGFNGKVLFTISDGNTDSCFNIDMETGQLK--- 783
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 784 ------------------VLMPMDREHTDL-YVLNITIYDLGKPQKSSWR 814
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F +D
Sbjct: 932 SPAFIPSSYSVKVLEDLPVGTVIAWLETQDPD-LGLGGQVRYSLV-NDYNGRFEVD---- 985
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 986 ----------------KASGAIRLSKELDYEKQQF-YNLTVRAKDKGRP 1017
Score = 35.4 bits (80), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 12/100 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---------RGGDGL 52
N PVF Y ++ E+ IGT +I ++A D D G N ++ YSV G+
Sbjct: 826 NNPVFLQDSYSVSILESSSIGTEIIQVEARDKD-LGSNGEVMYSVLTDTHQFIINSSTGI 884
Query: 53 GYFT--IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLL 90
Y +D E N+ + + + ++ +++V LK+
Sbjct: 885 VYIADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKIF 924
>gi|395541765|ref|XP_003772809.1| PREDICTED: protocadherin Fat 4 [Sarcophilus harrisii]
Length = 5148
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y ++ EN P+G+ ++ DAD G+NS++SYS+ GD LG FT+D G
Sbjct: 2106 NPPVFSSTSYSTSLMENLPLGSTILIFNVTDADD-GLNSQLSYSITSGDSLGQFTVDKNG 2164
Query: 62 PL 63
L
Sbjct: 2165 IL 2166
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 53/109 (48%), Gaps = 21/109 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS +Y + E PIGT V + A D+D S+ SY + G+ G F+
Sbjct: 3570 PVFSLEIYNVQISEGVPIGTHVTFVSAFDSDSVPSWSRFSYFIGSGNENGVFS------- 3622
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I+P T + I V LDRE P+ YNLT+ AVD GTPP
Sbjct: 3623 ---------INPQTGQ----ITVTAELDRETLPV-YNLTVLAVDLGTPP 3657
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y+ + EN GT ++ + AAD D G N ++ YS+ G+ F ID+
Sbjct: 2316 NNPVFAKALYKVEINENTLTGTDIVQVYAADGD-EGTNGQVRYSLLSGNENQEFRIDSVT 2374
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ + V K LDRE + Y+LT+++ D+G+ PR
Sbjct: 2375 GI--------------------LSVAKPLDREKKAM-YSLTVQSADRGSSPR 2405
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS VY+ + E P G+ V + A D D G+N+ + YS+ G+ L +F I
Sbjct: 639 PVFSQLVYRVNLSEEAPPGSYVSGVSATDGD-SGLNANLRYSIISGNELDWFHIS----- 692
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
+H +V T G ++ + VVL + R+
Sbjct: 693 DHSGLVTTAAAGGLDRERASQVVLNISARD 722
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y+ T+ E QP+ +L ++A+D D G N +I+YS+ G+ F I +G
Sbjct: 1158 NPPVFDQLSYEVTLSEAQPVNSLFFKVQASDQD-SGANGEIAYSIAEGNTGNAFGIFPDG 1216
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L V +++D + + +VV DR + PL + + +
Sbjct: 1217 QL----YVKSELDRELQDRYVLLVVAS--DRAVEPLSATVNVTVI 1255
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G N+ I YS+ G + G F+
Sbjct: 1477 NTPSFPKSTLFVDVLENMRIGELVTSVTATDSD-SGDNADIHYSITGTNNHGTFS----- 1530
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T I + K LD E PL Y L + A D+G PPR +
Sbjct: 1531 -----------ISPNTG----GIFLAKKLDFETQPL-YKLNITAKDQGRPPRSS 1568
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 52/110 (47%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N+ I Y ++ G
Sbjct: 414 NPPVFGSSHYQAGVPEDAAVGSSVLQVSAADAD-EGTNADIRYQLQEDGG---------- 462
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P +DP T I V + LD E A Y+LTL+A D+G P
Sbjct: 463 --------PFHMDPETGL----ITVREPLDYE-ARRQYSLTLQAHDRGVP 499
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 46/101 (45%), Gaps = 18/101 (17%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD P N IS + GG NE HF + +K
Sbjct: 533 ASVDENAQVGTVVALLTVTDADSPAANGNISVQILGG---------NEQ--RHFEVQRSK 581
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD-KGTPP 112
+ P I V LDRE P YNLT+ D G PP
Sbjct: 582 V-PNLSL----IKVASALDRERIP-SYNLTVSVSDNHGAPP 616
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y AT+ E+ P G+ V+ + A+DAD N+ ISY + GG+ FT
Sbjct: 2526 NVPTFAHKTYSATISEDAPTGSDVLLVSASDAD-ASTNAVISYRLIGGN--SQFT----- 2577
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I+ LLDRE Y L + + D G P
Sbjct: 2578 -----------INPSTGQ----IITSALLDRETKE-NYTLIVVSSDGGFP 2611
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF Y A ++EN+P G+ + T+ A+D D G N + YS+ GD F I
Sbjct: 851 NSPVFYPVQYFAHIQENEPAGSYITTVSASDPD-SGPNGTVKYSISAGD-TSRFQIH--- 905
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+H ++ TK+ +LDRE Y L + A D G
Sbjct: 906 --SHTGVISTKM---------------VLDRE-EKTAYQLQVVATDGG 935
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+P+F Y TV EN P GT V+ L A DAD G N+ I+YS++ D F ID
Sbjct: 3358 NSPIFIPEEYSPTVLENAPSGTTVMRLNATDAD-SGSNAVIAYSLQSSDS-DLFVID 3412
Score = 41.6 bits (96), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF + T KE+ G VI A DAD G++ + SY + GG+ G F +D
Sbjct: 299 NAPVFPEPSIVVTFKEDSSSGRQVILDTATDADIGSNGVDHR-SYRIVGGNEAGRFRLD- 356
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE A Y L + DKG P R Y
Sbjct: 357 -----------ITLNPSGEGAFLHLVSRGGLDRE-ATAYYQLLVEVEDKGEPKRRGY 401
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P FS ATV E+Q +G++V T+ A D D MN I+Y + G+ G F I+
Sbjct: 3253 HSPEFSQSHISATVPESQSVGSIVRTVSARDRD-AAMNGLITYHISSGNENGLFAIN--- 3308
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
GT + + K LD E+ + +T+ A D G R +Y
Sbjct: 3309 -----------ASTGT------LTLAKPLDYELHQ-KHEMTISATDGGWRARTSY 3345
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 22/109 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQAT+ E T V+ + A+D D G N I YSV G+ F ID+
Sbjct: 1372 NAPKFLKDFYQATISELAANLTQVLRVSASDVD-EGSNGLIHYSVVKGNEEKMFAIDS-- 1428
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGT 110
+++ LD E A Y+L ++AVD GT
Sbjct: 1429 ------------------ATGQVILAGQLDHE-ATASYSLLIQAVDSGT 1458
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF D + A + EN T ++T+ A D D G N ++ Y++ G+ F+I
Sbjct: 2833 NSPVFKDDPFVAEILENLSPRT-ILTVSAIDKDS-GPNGQLEYNIVNGNTENSFSI---- 2886
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I ++ LDRE Y LT+R DKGTPP+ T
Sbjct: 2887 ----------------HHSTGEIRSIRSLDREKVS-QYVLTVRCSDKGTPPQST 2923
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 22/111 (19%)
Query: 4 PVFSDFV-YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
PVFS Y+ +V EN P GT ++ ++A+D D G N + +S + D
Sbjct: 746 PVFSQEAGYEVSVAENAPAGTDLLVIEASDGD-LGDNGTVRFSFQEAD----------TE 794
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
FR +DP + + + + LDRE Y+L + AVD G+PP+
Sbjct: 795 QRSFR-----LDPVSGR----LSTISSLDREEQAF-YSLLVLAVDLGSPPQ 835
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N PVFS VY V EN +G V ++ A+ D +N+ I+Y + GD G F I+
Sbjct: 955 NPPVFSQAVYSFVVFENVALGYHVGSVSASTMD---LNTNITYVITTGDQKGVFAINQ 1009
>gi|47209329|emb|CAF93464.1| unnamed protein product [Tetraodon nigroviridis]
Length = 664
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 52/201 (25%), Positives = 80/201 (39%), Gaps = 86/201 (42%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY----------------- 44
NAPVFS VY+ ++ EN P+ TLVIT+ AADAD G+NS+I+Y
Sbjct: 234 NAPVFSQSVYKTSLPENSPLDTLVITVSAADAD-EGVNSEITYGFDHVSDDKPPFSLNPK 292
Query: 45 ----------------------SVRGGDGLGYFT--------IDNEGPLNHFRI----VP 70
S + G GLG + +++ P+ H + +P
Sbjct: 293 TGEVRVASSIDYERKSMYELQISAKDGLGLGSYATLIIEITDVNDNAPVIHLKSLTNPIP 352
Query: 71 TKIDPGTK---------------------------------KKEYNIVVLKLLDREIAPL 97
+ PG++ K Y++V LDRE+
Sbjct: 353 ENVSPGSEVGIINVQDRDSENNRQVRCSIQQNVPFKLVASIKNYYSLVTTGQLDRELVS- 411
Query: 98 GYNLTLRAVDKGTPPRETYKA 118
YN+T+ A D+G+PP + K+
Sbjct: 412 DYNITISATDEGSPPLSSSKS 432
>gi|355687592|gb|EHH26176.1| hypothetical protein EGK_16078 [Macaca mulatta]
Length = 4981
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 56/120 (46%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y ++ EN P+G+ V+ DA G+NS+++YS+ GD LG FT+D G
Sbjct: 1940 NPPIFSLNSYSTSLMENLPVGSTVLVFNVTDA-XSGINSELAYSIASGDSLGQFTVDKNG 1998
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L VLK LDRE YNL ++ D P + +T +
Sbjct: 1999 LLK---------------------VLKALDRESQSF-YNLVVQVHDLPQIPASRFTSTAQ 2036
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS VY+ + E P G+ V + A D D G+N+ + YS+ G+GLG+F I
Sbjct: 473 PVFSQQVYRVNLSEEAPPGSYVSGISATDGD-SGLNANLRYSIVSGNGLGWFHIS----- 526
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T G LDRE+A L + A D+G P+ +Y
Sbjct: 527 EHSGLVTTGAAGG-------------LDRELAS-QIVLNISARDQGVHPKVSY 565
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ +Y + E PIGT V + A D+D S+ SY + G+ G F+
Sbjct: 3402 PVFTLNIYSVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGAFS------- 3454
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I V LDRE P+ YNL++ AVD GTP
Sbjct: 3455 ---------INPQTGQ----ITVTAELDRETLPI-YNLSVLAVDSGTP 3488
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y+ + EN GT +I + AAD D G N ++ Y + G+ F ID+
Sbjct: 2150 NNPIFAQALYKVEINENTLTGTDIIQVFAADGD-EGTNGQVRYGIVNGNTNQEFRIDSVT 2208
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I V K LDRE P Y+LT++A D+G+ PR
Sbjct: 2209 GA--------------------ITVAKPLDREKTPT-YHLTVQAADRGSTPR 2239
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N+ I Y ++ +EG
Sbjct: 246 NPPVFGSSHYQAGVPEDAVVGSSVLQVAAADAD-EGTNADIRYRLQ-----------DEG 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P ++DP T I V + LD E A Y+LT++A+D+G P
Sbjct: 294 -------TPFQMDPETGL----ITVREPLDFE-ARRQYSLTVQAMDRGVP 331
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 47/107 (43%), Gaps = 18/107 (16%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD N IS + GG NE HF + +K
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSSAANGNISVQILGG---------NEQ--RHFEVQSSK 413
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK-GTPPRETYKA 118
+ P I V LDRE P YNLT+ D G PP +A
Sbjct: 414 V-PNLSL----IKVASALDRERIP-SYNLTVSVSDNYGAPPGAAVQA 454
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF Y+ T+ E++P+ + ++A+D D G N +I+Y++ G+ F I +G
Sbjct: 992 NSPVFDQLSYEVTLSESEPVNSRFFKVQASDKD-SGANGEIAYTIAEGNTGDAFGIFPDG 1050
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D + + +VV DR + PL + + +
Sbjct: 1051 QL----YIKSELDRELQDRYVLMVVAS--DRAVEPLSATVNVTVI 1089
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 50/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQAT+ E+ T V+ + A+D D G N I YS+ G+ F ID
Sbjct: 1206 NAPKFLKDFYQATISESAANLTQVLRVSASDVD-EGNNGLIHYSIIKGNEERQFAID--- 1261
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I G + ++ LD E P Y+L ++AVD GT P
Sbjct: 1262 -----------ITSG------QVALIGKLDYEATP-AYSLVIQAVDSGTIP 1294
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF Y TV EN P GT VI L A DAD G N+ I+Y+V+ D F +D
Sbjct: 3190 NSPVFLSDDYFPTVLENAPSGTTVIHLNATDAD-SGTNAVIAYTVQSSDS-DLFVVD 3244
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G N+ + YS+ G + G F+
Sbjct: 1311 NTPSFPKSTLFVDVLENMRIGELVSSVTATDSD-SGDNADLYYSITGTNNHGTFS----- 1364
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1365 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1402
Score = 42.0 bits (97), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G VI A D+D G++ + SY + G+ G F +D
Sbjct: 131 NAPVFPDPSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIIRGNEAGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P R Y
Sbjct: 189 -----------ITLNPSGEGAFLHLVSKGGLDREVTP-QYQLLVEVEDKGEPKRRGY 233
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 22/121 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS AT+ E+ +G++V T+ A D D MN I YS+ G+ G F I++
Sbjct: 3085 HTPEFSQSHMSATIPESHSVGSIVRTVSARDRD-AAMNGLIKYSISSGNEEGIFAINSST 3143
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ + + K LD E+ + +T+ A+D G R Y +
Sbjct: 3144 GI--------------------LTLAKALDYELCQ-KHEMTISAIDGGWVARTGYCSVTV 3182
Query: 122 N 122
N
Sbjct: 3183 N 3183
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A +KEN+P G+ + T+ A D D G N + YS+ GD
Sbjct: 685 NSPVFYPVQYFAHIKENEPGGSYITTVSATDPD-LGTNGTVKYSISAGD 732
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP F Y V +N +GT +I + A D G+NS++ Y + + LG F +DN+
Sbjct: 2979 NAPQFLKSKYFTPVTKNVKVGTKLIKVIAIDDKDFGLNSEVEYFISNDNHLGKFKLDND 3037
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVF Y V EN +G V ++ A+ D +NS ISY + GD G F I+
Sbjct: 789 NPPVFGQVAYSFVVFENVALGYHVGSVSASTMD---LNSNISYLITTGDQKGMFAIN 842
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 23/99 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL-NHFRIVPTK 72
++ EN PIGT VI++ A D D +N ++SY TI + P NHF I K
Sbjct: 1428 SIVENIPIGTSVISVTAHDPD-ADINGQLSY-----------TIIQQMPRGNHFTIDEVK 1475
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
GT I +DRE A L + LT++A D+ P
Sbjct: 1476 ---GT------IYTNAEIDREFANL-FELTVKANDQAVP 1504
>gi|402873140|ref|XP_003900444.1| PREDICTED: protocadherin Fat 2 [Papio anubis]
Length = 4349
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ FV+Q V+EN P GT V+ + A D D G++ ++ Y +R G GL F+I+ +
Sbjct: 1027 LHPPHFASFVHQGQVQENSPSGTQVMVVAAQD-DDSGLDGELQYFLRAGTGLAAFSINQD 1085
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I L LDRE A Y LT+ AVD+G+ P
Sbjct: 1086 TGM--------------------IQTLAPLDREFASY-YWLTVLAVDRGSVP 1116
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 53/109 (48%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y V EN +G +++T+ A D D P +NS I+YS+ GG+ LG+FTI
Sbjct: 3319 PQFPQDPYSTRVLENALVGDVILTVSATDEDGP-LNSDITYSLIGGNQLGHFTI------ 3371
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+ + V K LD E A Y+L LRA D G PP
Sbjct: 3372 --------------HPKKGELQVAKALDWEQAS-SYSLKLRATDSGQPP 3405
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 41/92 (44%), Gaps = 18/92 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y+ +V EN G LV+TLK DAD N +++ + GD LG F I G
Sbjct: 2902 NAPRFASEEYRGSVVENSEPGKLVVTLKTLDADISEQNRQVTCYITEGDPLGQFGISQVG 2961
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
E+ I K LDRE
Sbjct: 2962 ------------------DEWRISSRKTLDRE 2975
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P FS VY ++ E P T VI L A+D D G N +SY + G D +F I+
Sbjct: 2268 NPPTFSQLVYTTSISEGLPAQTPVIQLLASDRD-SGQNRDVSYQIVEDGSDVSKFFQIN- 2325
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G+ + + ++ LD E A +++ +RA+DKG PP
Sbjct: 2326 ----------------GSTGE---MSTVQELDYE-AQQHFHVKVRAMDKGDPP 2358
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++ P F+ Y+A+V + GT ++ ++A DAD G+N+++ YS+ G+G G+F I+
Sbjct: 1550 LHPPRFTQLHYEASVPDTIVPGTELLQVRAMDADR-GVNAEVHYSLLKGNGEGFFNIN 1606
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNE 60
N P F Y TV+EN PIG+ V+ L +D D P S+ + +G DG
Sbjct: 3422 NPPRFFQLNYSTTVQENSPIGSKVLQLILSDPDSPENGPPYSFRITKGNDG--------- 3472
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ FR+ P +V + L R A Y L ++A D G PP
Sbjct: 3473 ---SAFRVTPDGW----------LVTAEGLSRR-AQEWYQLQIQASDSGIPP 3510
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 47/112 (41%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP+F+ Y T+ EN P GT V+ + A D D G N ++YS+ G L
Sbjct: 454 HAPIFNRSSYDGTLDENIPPGTSVLAVTATDRD-HGENGYVTYSIAGPKAL--------- 503
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P IDP I K D E+ Y +RA D G+P R
Sbjct: 504 --------PFSIDPYLGI----ISTSKPTDYELMKRIYTFRVRASDWGSPFR 543
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P S V+ +++E+ P+GT V+ L A D D K+++++ G+ +G+F I
Sbjct: 1133 NPPQMSQAVFYPSIQEDAPVGTSVLQLDAWDPDSSS-KGKLTFNITSGNHMGFFIIH--- 1188
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLD 91
P+ ++D + K+ +I+ + +LD
Sbjct: 1189 PVTGLLSTARQLD--RENKDEHILEVTVLD 1216
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR---GGDGLGYFTID 58
N PVF Y+A + EN P+GT VI + A D D G + ++SY + G + F ID
Sbjct: 2793 NRPVFEADPYKAVLTENMPVGTSVIQVTAIDKD-TGRDGQVSYRLSADPGSNVHELFAID 2851
Query: 59 NEG 61
+E
Sbjct: 2852 SES 2854
>gi|66346693|ref|NP_005236.2| protocadherin Fat 1 precursor [Homo sapiens]
gi|334302792|sp|Q14517.2|FAT1_HUMAN RecName: Full=Protocadherin Fat 1; AltName: Full=Cadherin family
member 7; AltName: Full=Cadherin-related tumor suppressor
homolog; AltName: Full=Protein fat homolog; Contains:
RecName: Full=Protocadherin Fat 1, nuclear form; Flags:
Precursor
Length = 4588
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 55/112 (49%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y + E+ + VIT+ A DAD P NS I YS+ G+ FTID
Sbjct: 3331 NTPVFSQDTYTTVISEDAVLEQSVITVMADDADGPS-NSHIHYSIIDGNQGSSFTID--- 3386
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P + + + V KLLDRE GY LT++A D G+PPR
Sbjct: 3387 --------PVRGE---------VKVTKLLDRETIS-GYTLTVQASDNGSPPR 3420
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 58/116 (50%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVFS FV + TVKE+ P+G+LV+T+ A D D + +I YS+R G G+G F I E
Sbjct: 1029 LHPPVFSSFVEKGTVKEDAPVGSLVMTVSAHDED-ARRDGEIRYSIRDGSGVGVFKIGEE 1087
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE + Y LT+ A D+G P ++
Sbjct: 1088 TGV--------------------IETSDRLDRE-STSHYWLTVFATDQGVVPLSSF 1122
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N +++Y + GGD LG F ++
Sbjct: 2916 PRFTAEIYKGTVSEDDPQGGVIAILSTTDADSEEINRQVTYFITGGDPLGQFAVE----- 2970
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
T + E+ + V K LDRE Y LT+ A D
Sbjct: 2971 -------------TIQNEWKVYVKKPLDREKRD-NYLLTITATD 3000
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A EN PIGT V++L A D D G N ++YS+
Sbjct: 459 NPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPD-EGENGYVTYSIAN------------- 504
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
LNH VP ID T + + LD E+ P Y L +RA D G P R
Sbjct: 505 -LNH---VPFAIDHFTGA----VSTSENLDYELMPRVYTLRIRASDWGLPYR 548
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 58/119 (48%), Gaps = 25/119 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP FS Y TV EN GTL+ ++A DAD G+N KI YS + D G F+I+
Sbjct: 3121 NAPEFSADPYAITVFENTEPGTLLTRVQATDAD-AGLNRKILYSLIDSAD--GQFSINEL 3177
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I + K LDRE+ + Y L+L+AVD+G P R T T
Sbjct: 3178 SGI--------------------IQLEKPLDRELQAV-YTLSLKAVDQGLPRRLTATGT 3215
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKENQP+G+ VI + + D D G N K+ Y+V GG+ F ID E +
Sbjct: 726 VKENQPVGSSVIFMNSTDLD-TGFNGKLVYAVSGGNEDSCFMIDMETGM----------- 773
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ +L LDRE Y L + D G P + ++
Sbjct: 774 ---------LKILSPLDRETTD-KYTLNITVYDLGIPQKAAWR 806
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ +GT V+ + AA D N++I+YS+ G+ G F+ID+
Sbjct: 3226 NPPVFEYREYGATVSEDILVGTEVLQVYAASRDIEA-NAEITYSIISGNEHGKFSIDS-- 3282
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + Y LT+ A D GTP
Sbjct: 3283 ------------------KTGAVFIIENLDYE-SSHEYYLTVEATDGGTP 3313
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P+F +Y+A + E+ P G V +KA DAD ++ K+ YS+ G+ +F ID+
Sbjct: 2386 NPPLFEQQIYEARISEHAPHGHFVTCVKAYDADSSDID-KLQYSILSGNDHKHFVIDS 2442
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 10 VYQATVKENQPIGTLV-ITLKAADADPPGMNSKISYSVRGGDG-LGYFTIDNEGPLNHFR 67
V+ E P+ T V ++ D DP + +G +G + +I L FR
Sbjct: 245 VHIEQANECAPVITAVTLSPSELDRDPAYAIVTVDDCDQGANGDIASLSIVAGDLLQQFR 304
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
V + PG+K EY + + +D + P GYNLTL+A DKGTPP+
Sbjct: 305 TVRSF--PGSK--EYKVKAIGGIDWDSHPFGYNLTLQAKDKGTPPQ 346
Score = 41.6 bits (96), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ +G++V+ + A D D G N+++ YS+ G+ +G
Sbjct: 1558 HAPWFTASSYKGRVYESAAVGSVVLQVTALDKD-KGKNAEVLYSIESGN-IG-------- 1607
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F I P T K+ LDR Y+L ++A DKG+PP
Sbjct: 1608 --NSFMIDPVLGSIKTAKE---------LDRS-NQAEYDLMVKATDKGSPP 1646
Score = 39.7 bits (91), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N+PVF Y+A + EN P G+ VI ++A+DAD G N ++ YS+
Sbjct: 2805 NSPVFESSPYEAFIVENLPGGSRVIQIRASDAD-SGTNGQVMYSL 2848
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 20/110 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y T+ E IGT V+ ++A D+D N ISY + G +
Sbjct: 2279 NPPVFAQQSYAVTLSEASVIGTSVVQVRATDSDSEP-NRGISYQMFGNHSKSH------- 2330
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+HF +D T I +L+ LD E + + +RAVD G P
Sbjct: 2331 --DHFH-----VDSSTGL----ISLLRTLDYE-QSRQHTIFVRAVDGGMP 2368
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ V+E+ P GT+++ L+A D D G + ++ YS+ G G F +D
Sbjct: 923 NPPTFIPPNYRVKVREDLPEGTVIMWLEAHDPD-LGQSGQVRYSLL-DHGEGNFDVD--- 977
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT+RA DKG P
Sbjct: 978 -----------------KLSGAVRIVQQLDFEKKQV-YNLTVRAKDKGKP 1009
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 56/114 (49%), Gaps = 10/114 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y ++EN+P+G V+ L D D +++ G+ F ++ +G
Sbjct: 3436 NAPVFSRGNYSVIIQENKPVGFSVLQLVVTDEDSSHNGPPFFFTIVTGNDEKAFEVNPQG 3495
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR---EIAPLGYNLTLRAVDKGTPP 112
++ T K+K++ ++ +K+ D +++ L Y + +R +++ P
Sbjct: 3496 ------VLLTSSAIKRKEKDHYLLQVKVADNGKPQLSSLTY-IDIRVIEESIYP 3542
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 21/114 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S+ VY + EN P V+ ++A D D N K+ Y + G+ G+F+I +
Sbjct: 1135 NAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSS-NDKLMYKITSGNPQGFFSIHPK- 1192
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
T + T +K LDRE + L + D G+PP+ T
Sbjct: 1193 ---------TGLITTTSRK---------LDREQQD-EHILEVTVTDNGSPPKST 1227
>gi|444723716|gb|ELW64355.1| Protocadherin Fat 2 [Tupaia chinensis]
Length = 4521
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ FV+Q V+EN P GT V+ + A D D G++ ++ YS+R G L F+I+ +
Sbjct: 1167 LHPPHFASFVHQGQVQENSPSGTQVMIVAARD-DDSGLDGELQYSLRAGTSLAAFSINQD 1225
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I + LDRE A Y LT+ AVDKG+ P
Sbjct: 1226 TGM--------------------IQTMAPLDREFASY-YWLTVLAVDKGSVP 1256
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 52/109 (47%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F +Y V EN +G +++T+ A D D P +NS I+YS+ GG+ LG+FT+
Sbjct: 3494 PRFPQELYDTRVLENAIVGDIILTVSATDEDGP-LNSAITYSLVGGNQLGHFTV------ 3546
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K + V K LD E Y+L LRA D G PP
Sbjct: 3547 --------------HPKTGELQVAKALDWEQTS-SYSLRLRATDSGQPP 3580
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 52/112 (46%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+APVF+ Y+ T+ EN P GT V+T+ A D D G N I YS+ G
Sbjct: 594 HAPVFNRSSYEGTLDENIPPGTSVLTVTATDRD-HGENGCIIYSIAGP------------ 640
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+++P IDP I K +D E+ YN +RA D G+P R
Sbjct: 641 -----KVLPFSIDPYLGV----ISTSKPMDYELMKRIYNFRVRASDWGSPFR 683
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 40/92 (43%), Gaps = 18/92 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y+ +V EN G LV TLK DAD N +++ + GD LG F I G
Sbjct: 3083 NAPRFASEDYRGSVIENSEPGELVATLKTLDADISEQNRQVTCYITEGDPLGQFGISQAG 3142
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
E+ I K LDRE
Sbjct: 3143 ------------------DEWRISSRKTLDRE 3156
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ Y+A+V + GT ++ ++AAD+D G N+++ YS+ G+ G+F I+
Sbjct: 1729 LHPPHFTQLHYEASVPDTTAPGTELLQVRAADSD-RGANAEVHYSLLKGNSEGFFNIN-- 1785
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
L V K+D + + + LT++A D+G+P R
Sbjct: 1786 -ALLGIITVAQKLDQASHAQ------------------HTLTVKAEDQGSPKRH 1820
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF + +++++ PIG V+T+ A D D + Y + G+ LGYF
Sbjct: 700 NQPVFEEVNCTGSIRQDWPIGKSVMTVSAIDVDEL---QNLKYEIVSGNELGYFD----- 751
Query: 62 PLNHF 66
LNHF
Sbjct: 752 -LNHF 755
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLG---YFTID 58
N P+F Y+A + EN P+GT VI + A D D G + ++SY + G G FTID
Sbjct: 2974 NRPIFEADPYKAVLTENMPVGTSVIQVTANDQD-TGRDGQVSYRLSGEPGSNVHELFTID 3032
Query: 59 NEG 61
++
Sbjct: 3033 SKS 3035
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
N P FS VY +V E P T VI L A+D D G N +SY V G + F
Sbjct: 2447 NPPTFSQLVYTTSVSEGLPAQTPVIQLLASDQD-SGKNRDVSYQIVEDGSNVSKF----- 2500
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
F+I + + T ++ LD E + +++ +RA+D+G PP
Sbjct: 2501 -----FQINGSTGEMSTVQE---------LDYE-SQQHFHVKVRAMDRGDPP 2537
Score = 36.2 bits (82), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y TV+EN PIG+ V+ L +D D P S+ + G+ F + +G
Sbjct: 3597 NPPRFFQLNYSTTVQENSPIGSKVLQLILSDPDSPENGPPYSFRITKGNTGSAFRVTPDG 3656
Query: 62 PL 63
L
Sbjct: 3657 WL 3658
>gi|403285668|ref|XP_003934135.1| PREDICTED: protocadherin Fat 2 [Saimiri boliviensis boliviensis]
Length = 4369
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ FV+Q V+EN P GT V+ + A D D G++ ++ Y +R G GL F+I+ +
Sbjct: 1027 LHPPHFASFVHQGQVQENSPSGTQVMVVAAHD-DDSGLDGELQYFLRAGTGLAAFSINQD 1085
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I L LDRE A Y LT+ AVD+G+ P
Sbjct: 1086 TGM--------------------IQTLAPLDREFASY-YWLTVLAVDRGSVP 1116
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 53/109 (48%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y V EN +G +++T+ AAD D P +NS I+YS+ G+ LG+FTI
Sbjct: 3339 PRFPQDPYSTRVLENALVGDVILTVSAADEDGP-LNSDITYSLVEGNQLGHFTI------ 3391
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+ + V K LD E A Y+L LRA D G PP
Sbjct: 3392 --------------HPKKGELQVAKALDWEQAS-SYSLKLRATDSGQPP 3425
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 40/92 (43%), Gaps = 18/92 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y+ +V EN G LV TLK DAD N +++ + GD LG F I G
Sbjct: 2922 NAPRFASEEYRGSVIENSEPGELVATLKILDADISEQNRQVTCYITEGDPLGQFGISQVG 2981
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
E+ I K LDRE
Sbjct: 2982 ------------------DEWRISSRKTLDRE 2995
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P FS VY ++ E P T VI L A+D D G N +SY + G D +F I+
Sbjct: 2288 NPPTFSQLVYTTSISEGLPAQTPVIQLLASDQD-SGRNRDVSYQIVEDGSDVSKFFQIN- 2345
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G+ + + ++ LD E A +++ +RA+DKG PP
Sbjct: 2346 ----------------GSTGE---MSTVQELDYE-AQQRFHVKVRAMDKGDPP 2378
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNE 60
N P F Y TV+EN PIG+ V+ L +D D P S+ + +G DG
Sbjct: 3442 NPPRFFQLNYSTTVQENSPIGSKVLQLILSDPDSPENGPPYSFRITKGNDG--------- 3492
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ FR+ P +V + L R A Y L ++A D G PP
Sbjct: 3493 ---SAFRVTPDGW----------LVTAESLSRR-AQEWYQLQIQASDSGIPP 3530
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++ P F+ Y+A++ + GT ++ ++A DAD G N+++ YS+ G+G G+F I+
Sbjct: 1570 LHPPRFTQLRYEASIPDTTAPGTELLQVRAMDAD-RGANAEVRYSLLKGNGEGFFNIN 1626
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N P S V+ +++E+ P+GT V+ L A+D D K+++++ G+ +G+F I
Sbjct: 1133 NPPQMSRAVFYPSIQEDAPVGTSVLQLDASDPDSSS-KGKLTFNITSGNHMGFFII 1187
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR---GGDGLGYFTID 58
N PVF Y+A + EN P+GT VI + A D D G + ++SY + G + F ID
Sbjct: 2813 NRPVFEADPYKAVLTENMPVGTSVIQVTAIDKD-TGRDGQVSYRLSADPGSNIHELFAID 2871
Query: 59 NEG 61
+E
Sbjct: 2872 SES 2874
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 46/112 (41%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP+F+ Y + EN P GT V+ + A D D N ++YS+ G L
Sbjct: 454 HAPIFNRSSYDGILDENIPPGTSVLAVTATDQD-HRENGYVTYSIAGPKAL--------- 503
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P IDP I K +D E+ Y +RA D G+P R
Sbjct: 504 --------PFSIDPYLGI----ISTSKPMDYELMKRIYTFRVRASDWGSPFR 543
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 20/119 (16%)
Query: 4 PVFSDFVYQAT-VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-- 60
P F D Q+ V EN P+ T + L A D D G N K+ Y + G+ G F I+ E
Sbjct: 712 PQFEDHFPQSIDVLENAPVNTSLARLAATDPD-AGFNGKLVYVIADGNEEGCFDIELETG 770
Query: 61 -----GPLNH----FRIVPTKI-DPGT-KKKEYNIVVLKLLDR-----EIAPLGYNLTL 103
PL++ F I+ + D GT +K + ++ + + D P GY LT+
Sbjct: 771 LLTIAAPLDYETTNFYILNVTVYDLGTPQKSSWKLLTVNVKDWNDHAPRFPPGGYQLTI 829
>gi|50510647|dbj|BAD32309.1| mKIAA0811 protein [Mus musculus]
Length = 1654
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 40/109 (36%), Positives = 57/109 (52%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y V EN +G +++T+ A+D D P +NS I+YS+ GG+ LG+FTID
Sbjct: 624 PRFTHDLYTVRVLENAIVGDVILTVSASDDDGP-VNSVITYSLVGGNQLGHFTID----- 677
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+ + V K LD E P Y+L +RA D G PP
Sbjct: 678 ---------------PKKGKLQVAKALDWEQTP-SYSLRIRATDSGQPP 710
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+ +V EN G LV TLK DAD N +++ + GD LG F+I G
Sbjct: 207 NPPRFASEDYRGSVVENNEPGELVATLKTLDADISEQNRQVTCYITEGDPLGQFSISQVG 266
Query: 62 PLNHFRIVPTK 72
+ +RI K
Sbjct: 267 --DEWRITSRK 275
Score = 35.8 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY--SVRGGDGL-GYFTID 58
N PVF Y+A + EN P GT VI + A D D G + ++SY SV G + F +D
Sbjct: 98 NRPVFEADPYKAFLTENMPGGTTVIQVTANDQD-TGSDGQVSYRLSVEPGSNIHQLFAVD 156
Query: 59 NE 60
+E
Sbjct: 157 SE 158
Score = 35.4 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P S +Y V+E+ G ++ + A D D N++I+YS+ G +
Sbjct: 312 NSPQCSQLLYTGKVREDVTPGHFILKVSAIDVD-MDTNAQITYSLHGPGAQEF------- 363
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
K+DP T + + L +LDRE + YNL +A D G
Sbjct: 364 ----------KLDPHTGE----LTTLSVLDRERKDV-YNLVAKATDGG 396
>gi|296193285|ref|XP_002806645.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2 [Callithrix
jacchus]
Length = 4349
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ FV+Q V+EN P GT V+ + A D D G++ ++ Y +R G GL F+I+ +
Sbjct: 1027 LHPPHFASFVHQGQVQENSPSGTQVMVVAAHD-DDSGLDGELQYFLRAGTGLAAFSINQD 1085
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I L LDRE A Y LT+ AVD+G+ P
Sbjct: 1086 TGM--------------------IQTLAPLDREFASY-YWLTVLAVDRGSVP 1116
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 52/109 (47%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y V EN +G +++T+ A D D P +NS I+YS+ GG+ LG+F I
Sbjct: 3319 PRFPQDPYNTRVLENALVGDVILTVSATDEDGP-LNSDITYSLVGGNQLGHFII------ 3371
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+ + V K LD E A Y+L LRA D G PP
Sbjct: 3372 --------------HPKKGELQVAKALDWEQAS-SYSLKLRATDSGQPP 3405
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 40/92 (43%), Gaps = 18/92 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y+ +V EN G LV TLK DAD N +++ + GD LG F I
Sbjct: 2902 NAPRFASEEYRGSVIENSEPGELVATLKTLDADISEQNRQVTCYITEGDPLGQFGISQ-- 2959
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
+ E+ I K LDRE
Sbjct: 2960 ----------------VEDEWRISSRKTLDRE 2975
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P FS VY ++ E P T VI L A+D D G N +SY + G D +F I+
Sbjct: 2268 NPPTFSQLVYTTSISEGLPAQTPVIQLLASDQD-SGRNRDVSYQIVEDGSDVSKFFQIN- 2325
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G+ + + ++ LD E A +++ +RA+DKG PP
Sbjct: 2326 ----------------GSTGE---MSTVQELDYE-AQQHFHVKVRAMDKGDPP 2358
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++ P F+ Y+A+V + GT ++ ++A DAD G N+++ Y++ G+G G+F I+
Sbjct: 1550 LHPPYFTQLHYEASVPDTTAPGTELLQVRAMDAD-RGANAEVRYTLLKGNGEGFFNIN 1606
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P S V+ +++E+ P+GT V+ L A+D D K+++++ G+ +G+F I
Sbjct: 1133 NPPQMSRAVFYPSIQEDAPVGTSVLQLDASDPDSSS-KGKLTFNITSGNHMGFFIIH--- 1188
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPL 97
P+ ++D + K+ +I+ + +LD PL
Sbjct: 1189 PVTGLLSTARQLD--RENKDEHILEVTVLDNGEPPL 1222
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y TV+EN PIG+ V+ L +D D P S+ + G N G
Sbjct: 3422 NPPRFFQLNYSTTVQENSPIGSKVLQLILSDLDSPENGPPYSFRITKG---------NTG 3472
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ FR+ P +V + L + + Y L ++A D G PP
Sbjct: 3473 --SAFRVTPDGW----------LVTAEGLSKRVQEW-YQLQIQASDSGIPP 3510
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 46/112 (41%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+APVF+ Y T+ EN P GT V+ A D D N ++YS+ G L
Sbjct: 454 HAPVFNRSSYDGTLDENIPPGTSVLAATATDQD-HRENGYVTYSIAGPKAL--------- 503
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P IDP I K +D E+ Y +RA D G+P R
Sbjct: 504 --------PFSIDPYLGI----ISTSKPMDYELMKRIYTFRVRASDWGSPFR 543
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG---GDGLGYFTID 58
N PVF Y+A + EN P+GT VI + A D D G + ++SY + + F ID
Sbjct: 2793 NRPVFEADPYKAVLTENMPVGTSVIQVTAIDKD-TGRDGQVSYRLSADPSSNVHELFAID 2851
Query: 59 NEG 61
+E
Sbjct: 2852 SES 2854
>gi|334331227|ref|XP_003341469.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1-like [Monodelphis
domestica]
Length = 4550
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 58/116 (50%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P+FS FV + VKE+ P+GT V+T+ A D D G + +I YS+R G G+G F ID E
Sbjct: 1027 LHPPLFSCFVDKGLVKEDVPVGTSVMTVSAHDED-TGRDGEIRYSIRDGSGVGVFKIDEE 1085
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I + LDRE Y LT+ A D+G P ++
Sbjct: 1086 KGV--------------------IETAEKLDRETVS-HYWLTVFATDQGVVPLSSF 1120
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 57/112 (50%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS +Y A + E+ + ++T+ A DAD P NS I YS+ G+ FTID
Sbjct: 3294 NTPVFSQDMYTAVISEDAILEQSIVTVMADDADGPS-NSHIHYSIIDGNQGNPFTID--- 3349
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P + + I V +LLDRE GY LT++A D G+PPR
Sbjct: 3350 --------PVRGE---------IKVTQLLDRETIS-GYTLTVQAADNGSPPR 3383
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ +Y+ TV E+ P G ++ L DAD +N +++Y + GGD LG F ++N
Sbjct: 2877 NPPRFTAEIYKGTVSEDDPPGGVIAILSTTDADTEEINRQVTYYITGGDPLGQFAVEN-- 2934
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE Y LT+ A D
Sbjct: 2935 ----------------IQNEWKVYVKKPLDREKRD-SYLLTITATD 2963
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 57/119 (47%), Gaps = 25/119 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP FS Y TV EN T + ++A DAD G+N KISYS V D G F+ID
Sbjct: 3084 NAPEFSADPYAITVFENTEPKTPLTRVQATDAD-AGLNHKISYSLVNSAD--GQFSIDES 3140
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I + K LDRE+ + YNL L+AVD+G P R T T
Sbjct: 3141 SGI--------------------IRLEKPLDRELQAV-YNLILKAVDQGLPRRLTATGT 3178
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 50/117 (42%), Gaps = 22/117 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A+ EN PIGT ++++ A D D G N ++YS+
Sbjct: 460 NPPEFTQTSYRASFDENVPIGTSIMSVSAIDPD-EGENGYVTYSIAN------------- 505
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
LNH V E+ LD E+ P Y L +RA D G P R +A
Sbjct: 506 -LNHVPFVINHFTGAVSTSEH-------LDYELMPRVYTLRIRASDWGLPYRREVEA 554
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 54/112 (48%), Gaps = 20/112 (17%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKI-SYSVRGGDGLGYFTIDNEG 61
APV + + E P +V T++ D G N +I S S+ GD
Sbjct: 255 APVITAVTVSPSELEKDPTYAIV-TVEDHDQ---GSNGEIASLSIVAGD----------- 299
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
PL FR V + PG+K EY I + +D E P GYNLTL+A DKG PP+
Sbjct: 300 PLQQFRTVRSF--PGSK--EYKIKTVGHVDWESHPFGYNLTLQAKDKGNPPQ 347
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 23/117 (19%)
Query: 2 NAPVF-SDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+AP F S VKEN P+G+ +I + A D D G NSK+ Y++ GG+ F ID E
Sbjct: 713 HAPQFRSSLPTSIEVKENYPVGSNIILVNATDLD-SGFNSKLVYAISGGNDDSCFMIDLE 771
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ + VL LDRE A Y L + D G P + +++
Sbjct: 772 TGM--------------------LKVLSPLDRE-ATEKYTLNITVYDLGIPQKASWR 807
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ YQ V E+ +G++V+ + A D D G N+++ YS+ G+ FTID
Sbjct: 1520 HAPWFTSSSYQGRVYESAAVGSVVLQVTALDKD-KGENAEVLYSIESGNIGNSFTID--- 1575
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+ +I K LDR + Y+L ++A DKG PP
Sbjct: 1576 PILG-----------------SIKTAKELDRS-SQGEYDLMVKATDKGNPP 1608
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 10/114 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y ++EN+P+G V+ L D D S+S+ G+ F ++ +G
Sbjct: 3399 NAPVFSKGNYSIIIQENKPVGVSVLQLMVTDKDSSHNGPPFSFSIMSGNEEKAFEVNQDG 3458
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR---EIAPLGYNLTLRAVDKGTPP 112
L I T I K K++ + +K+ D +++ L Y + +R +++ P
Sbjct: 3459 VL----ITSTAI--KRKVKDHYFLHVKVADNGKPQLSSLAY-IDIRVIEESIYP 3505
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y+ + + P GT VI + A+DAD G N+ I+YS+ ++
Sbjct: 2555 NAPQFRATKYRVNIGSDAPKGTSVIKVLASDAD-EGSNADITYSIEADSE----SVQENL 2609
Query: 62 PLNH-FRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+N F I+ TK L L+ E+ + +RAVD G+PP+E+
Sbjct: 2610 EINRLFGIITTKES------------LIGLENEV----FTFFVRAVDGGSPPKES 2648
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ +GT V+ + AA D N++I+Y++ G+ G F+ID
Sbjct: 3189 NPPVFEYREYGATVPEDVLVGTEVLQVYAASRDIEA-NAEITYAIISGNEHGKFSIDATT 3247
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I ++ LD E + Y LT+ A D GTP
Sbjct: 3248 GA--------------------IFIIDHLDYE-SSHDYYLTVEATDGGTP 3276
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P+F +Y+A + E P G V +KA DAD + K+ YS+ G+ F ID++
Sbjct: 2349 NPPLFDQPLYEAKISEQAPHGHFVTCVKAYDADSSDTD-KLEYSILSGNEQKNFAIDSK 2406
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 47/114 (41%), Gaps = 25/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLG---YFTID 58
N PVF+ Y T+ E +GT V+ + A D D N ISY + G YF ID
Sbjct: 2241 NPPVFTQQSYVTTLSEATVMGTSVVHVWATDTD-SAPNRGISYHLFGNHSKSPDQYFHID 2299
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ L I +++ LD E + L +RAVD G PP
Sbjct: 2300 SSSGL--------------------ISLVRTLDYE-ETQRHELLVRAVDSGMPP 2332
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 49/117 (41%), Gaps = 29/117 (24%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVIT-------LKAADADPPGMNSKISYSVRGGDGLGY 54
NAPVF Y + E+ PI ++V+T ++AADAD N+ + Y + Y
Sbjct: 1723 NAPVFLQARYTGLISESAPISSVVLTDKNVPLVIRAADADKES-NALLVYQIVESSAHKY 1781
Query: 55 FTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
F ID+ I + LD E AP+ + T++ D GTP
Sbjct: 1782 FAIDSSTGA--------------------IRTVLSLDYEEAPI-FQFTVQVHDMGTP 1817
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + Y A VK + +G ++ ++ A D D G N ++ Y ++ + +F I G
Sbjct: 2039 NAPVFVNLPYYAAVKVDADVGHIIRSVTAVDRD-IGRNGEVHYYLK--EHHEHFQIGPSG 2095
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVL 87
++ + K +P T KEY I ++
Sbjct: 2096 EIS----LKKKFEPDTLNKEYLITIV 2117
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTID 58
N+PV Y+A + EN P G+ VI +KA D D G N ++ YS+ + D + F ID
Sbjct: 2768 NSPVLESNPYEAFIVENLPGGSRVIQVKATDLD-SGANGQVLYSLDQSQSLDVIESFAID 2826
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVL 87
E I K K+ +Y+I V+
Sbjct: 2827 METGW----ITTLKELDHEKRDKYHITVV 2851
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
+++PVF Y+ + EN P+ TLV+ +KA D D G+ +I+Y +
Sbjct: 2450 LHSPVFMQNEYEVELAENAPLQTLVVEVKATDED-SGIYGQITYHI 2494
>gi|148703591|gb|EDL35538.1| mCG141119 [Mus musculus]
Length = 4592
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 57/116 (49%), Gaps = 20/116 (17%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVFS FV + VKE+ P G+ V+T+ A D D G + +I YS+R G G+G F ID E
Sbjct: 1030 LHTPVFSSFVEKGVVKEDVPTGSSVMTVSAHDED-TGRDGEIRYSIRDGSGIGVFRIDEE 1088
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE + Y LT+ A D+G P ++
Sbjct: 1089 ------------------TGKCVIETSDRLDRE-STSHYWLTVYATDQGVVPLSSF 1125
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVFS Y V E+ + VIT+ A DAD P NS I YS+ G+ FTID
Sbjct: 3335 NSPVFSQDTYTTVVSEDAALEQPVITIMADDADGPS-NSHIHYSIIEGNQGSPFTID--- 3390
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P + + + V K LDRE GY LT++A D G PPR
Sbjct: 3391 --------PVRGE---------VKVTKPLDRETIS-GYTLTVQAADNGNPPR 3424
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N ++SY + GGD LG F ++N
Sbjct: 2920 PRFTAEIYKGTVSEDDPPGGVIAILSTTDADTEEINRQVSYFITGGDALGQFAVEN---- 2975
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ ++ + V K LDRE Y LT+ A D
Sbjct: 2976 --------------VQSDWRVYVKKPLDREQKD-SYLLTVTATD 3004
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 58/119 (48%), Gaps = 25/119 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP F+ Y TV EN GT + ++A DAD G+N KISYS V D G F+I+
Sbjct: 3125 NAPEFTAEPYTITVFENTEPGTPLTRVQATDAD-TGLNRKISYSLVESAD--GQFSINER 3181
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I + K LDRE+ + Y LTL+AVD+G P R T T
Sbjct: 3182 SGI--------------------IQLEKHLDRELQAV-YTLTLKAVDQGLPRRLTATGT 3219
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 50/114 (43%), Gaps = 26/114 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A++ EN PIG V + A D D G N ++YS+
Sbjct: 460 NPPEFTQTSYKASIDENAPIGAAVTRVSAMDPD-EGENGYVTYSIAN------------- 505
Query: 62 PLNHFRIVPTKID--PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
LNH VP ID GT N LD E+ P Y L +RA D G P R
Sbjct: 506 -LNH---VPFVIDHFTGTVSTSEN------LDYELMPRVYTLRIRASDWGLPYR 549
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKEN P+G ++ + A D D G N K+ Y++ GG+ FTID E +
Sbjct: 727 VKENLPVGANILFMNATDLDS-GFNGKLVYAISGGNDDSCFTIDMETGV----------- 774
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ VL LDRE+ Y L + D G P R ++
Sbjct: 775 ---------LKVLSPLDREVMD-KYTLNITVYDLGIPQRAAWR 807
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y A+V E+ IGT V+ + AA D N++I+Y++ G+ G F+ID+
Sbjct: 3230 NPPVFEYREYGASVSEDIVIGTEVLQVYAASRDIEA-NAEITYAIISGNEHGKFSIDS-- 3286
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I +++ LD E + Y LT+ A D GTP
Sbjct: 3287 ------------------KTGAIFIIESLDYE-SSHEYYLTVEATDGGTP 3317
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P+F VY+A + E+ G V+ ++A DAD ++ K+ YS+ G+ F ID E
Sbjct: 2390 NPPLFEQQVYEARISEHAAHGHFVMCVRACDADSSDLD-KLEYSILSGNDHKSFIIDRE 2447
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 23/101 (22%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
Y V+E+ P GT+++ L+A D D G +S++ YS+ G G+F +D
Sbjct: 933 YSVKVREDLPEGTIIMWLEAYDPD-VGQSSQVRYSLL-DHGEGHFDVD------------ 978
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E L YNLT+RA DKG P
Sbjct: 979 --------KLSGAVRIVQQLDFEKKQL-YNLTVRAKDKGKP 1010
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y V E+ +G++V+ + A D D G N+++ YS+ G+ FTID
Sbjct: 1562 HAPWFTSPSYDGRVYESAAVGSVVLQVTALDKD-KGRNAEVLYSIESGNIGNSFTID--- 1617
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+ +I + LDR + Y+L ++A DKG PP
Sbjct: 1618 PILG-----------------SIKTARELDRS-HQVDYDLMVKATDKGDPP 1650
Score = 40.0 bits (92), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+++PVF Y+ + EN P+ TLV+ +KA+D D G+ S ++Y + F +++
Sbjct: 2491 LHSPVFHQNEYEVELAENAPLHTLVVQVKASDRD-SGIYSHVTYHIVNDFAKDRFYVNDR 2549
Query: 61 GPL 63
G +
Sbjct: 2550 GQI 2552
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 10 VYQATVKENQPIGTLV-ITLKAADADPPGMNSKISYSVRGGDG-LGYFTIDNEGPLNHFR 67
V+ E PI T V ++ D DP + +G +G + +I L F+
Sbjct: 246 VHVEQANECAPIITAVTLSPSELDKDPTYAIITVEDCDQGANGEIASLSIVAGDLLQQFK 305
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
V + PG+K + + + +D + P GYNLTL+A DKGTPP+
Sbjct: 306 TVRSF--PGSKA--FKVKAVGAVDWDSHPYGYNLTLQAKDKGTPPQ 347
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 21/114 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S+ VY + EN P V+ ++A D D N K++Y + G+ G+F+I +
Sbjct: 1138 NAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSS-NDKLTYRITSGNPQGFFSIHPK- 1195
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
T + T +K LDRE + L + D G PPR T
Sbjct: 1196 ---------TGLITTTSRK---------LDREQQD-EHILEVTVTDNGVPPRST 1230
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y+ + + GT V+ + A+DAD G N+ ++Y++ D+E
Sbjct: 2596 NAPQFRSTKYEVNIGSSAAKGTSVVKVFASDAD-EGSNADVTYAIEA---------DSES 2645
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I K+ KE L L+ E + +RAVD G+PPRE+
Sbjct: 2646 VKENLEI--NKLTGLITTKE----SLIGLENEF----FTFFVRAVDSGSPPRES 2689
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTID 58
N+PV Y+A + EN P G+ VI ++A+D D G N ++ YS+ + D + F I+
Sbjct: 2809 NSPVLESSPYEAFIVENLPGGSRVIQIRASDLD-SGANGQVMYSLDQSQDADIIESFAIN 2867
Query: 59 NE 60
E
Sbjct: 2868 ME 2869
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y T+ E+ G LV+ + A DAD N++I+Y++ G +
Sbjct: 3023 NSPVCEKTSYSDTIPEDALPGKLVMQVSATDADIRS-NAEITYTLFGSGAEKF------- 3074
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
K++P T + + L LLDRE + YNL ++A D G
Sbjct: 3075 ----------KLNPDTGE----LRTLALLDREEQAV-YNLLVKATDGG 3107
Score = 35.8 bits (81), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS Y ++EN+P+G V+ L D D +++ G+ F ++ G
Sbjct: 3440 NAPLFSRDNYSVIIQENKPVGFSVLKLVVTDKDSSHNGPPFFFTIVSGNDENAFEVNQHG 3499
Query: 62 PL 63
L
Sbjct: 3500 VL 3501
>gi|292620786|ref|XP_001920058.2| PREDICTED: protocadherin Fat 2 [Danio rerio]
Length = 4342
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 56/116 (48%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+N P+F + V+ A V E+ IGT V+TL A D D G + + Y + G GLG FT+D E
Sbjct: 1027 LNRPLFGEMVHTAAVMEDAKIGTSVLTLTAVDND-LGRDGVVRYYIHDGSGLGVFTVDEE 1085
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LLDRE+ P Y LT+ A D GT P ++
Sbjct: 1086 TGV--------------------IQTAGLLDREVVP-HYWLTVYAKDLGTIPLVSW 1120
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 51/118 (43%), Gaps = 22/118 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ YQA++ EN IGT V+++ A D D + +G + I N G
Sbjct: 456 NAPSFTLPSYQASLPENVRIGTSVLSVSAIDVD------------KDNNGFVTYAIANTG 503
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
P VP IDP T I + D E+ Y+L + A D G P + T
Sbjct: 504 P------VPFSIDPLTGV----ISTSQEFDYELMKRWYHLRIWASDSGNPFNRVSECT 551
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 23/111 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + Y A V E PIGT V+ + A D D N++ +Y + ID E
Sbjct: 2266 NAPVFQNLSYVADVFEGLPIGTSVLQVSAVDRD-ADKNAEATYQL----------IDKE- 2313
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+HF +IDP + +V ++LD E + + L ++A DKG PP
Sbjct: 2314 --SHF----FEIDPLSGV----LVTTQVLDYE-STQQFTLKVKATDKGVPP 2353
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y + E+ G + + ++A D D P N+ I YS+ GD F+ID
Sbjct: 3311 NPPVFNRSSYSTVIPEDISPGEMALQVRAIDLDGPP-NNFIIYSIVSGDPKQQFSID--- 3366
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P F I + +LDRE Y+LT++A D+G PP
Sbjct: 3367 PRTGF-----------------ITLRSMLDRE-EITHYSLTVQAADEGDPP 3399
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N P F++ +YQ ++ EN G ++TL AD D N +I + GD LG F++
Sbjct: 2895 NPPQFTEELYQGSILENSRPGENIVTLTTADKDVSAENRQIVCYITDGDPLGQFSV 2950
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P FS Y+ TV +N I T + + A D D G+NS++ YS++G D G+F++D
Sbjct: 3102 NPPQFSTSHYEVTVFDNTTIRTPIAVIYAKDPD-TGINSEVRYSLQGADS-GFFSLD 3156
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PLN F+I+P+ G + +V K +D PLG N++L+A D+ PP
Sbjct: 297 PLNCFQIIPSAFYDGG----FQLVSTKFIDWSQNPLGLNISLQAKDRSNPP 343
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 50/111 (45%), Gaps = 23/111 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR-GGDGLGYFTIDNEGP 62
P F D Y+ + GT V+ +KA D D G N+ I YS GG+ G F
Sbjct: 1550 PSFLDTHYEGIISNLALTGTEVLRVKALDKD-TGSNADIVYSFHSGGNVDGAF------- 1601
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
KID GT +I V LDR + Y+LT++A D+G P R
Sbjct: 1602 ---------KIDQGTG----SIRVSDALDR-LPQEHYHLTVKATDQGFPQR 1638
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR-GGDGLG-YFTIDN 59
N P+F Y+A + EN P GT VI + A DAD +N ++SY++ D +G F ID+
Sbjct: 2787 NKPMFEADTYKAFLAENLPSGTTVIQVTANDAD-ANINGEVSYTLEPESDDIGDMFAIDS 2845
Query: 60 E 60
+
Sbjct: 2846 Q 2846
>gi|149052656|gb|EDM04473.1| rCG33481 [Rattus norvegicus]
Length = 3111
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 40/109 (36%), Positives = 57/109 (52%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y V EN +G +++T+ A+D D P +NS I+YS+ GG+ LG+FTI+
Sbjct: 2081 PRFTHDLYTVRVLENAVVGDVILTVSASDDDGP-VNSAITYSLVGGNQLGHFTIN----- 2134
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+ + V K LD E P Y+L LRA D G PP
Sbjct: 2135 ---------------PKKGKLQVAKALDWEQTP-SYSLRLRATDSGQPP 2167
Score = 43.1 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 32/60 (53%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+ +V EN G LV TLK DAD N +++ + GD LG F+I G
Sbjct: 1664 NPPRFASEDYRGSVVENNEPGELVATLKTLDADVSDQNRQVTCYITEGDPLGQFSISQVG 1723
Score = 42.0 bits (97), Expect = 0.078, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 47/113 (41%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P FS VY +V E P T VI L A+D D G N +SY + G D +F I+
Sbjct: 1028 NPPTFSQLVYTTSVSEGSPAQTPVIQLLASDQD-SGQNQDVSYQIVEDGSDVSKFFRING 1086
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I ++ LD E + + +RA+DKG PP
Sbjct: 1087 STG--------------------EIFTIQELDYETHQ-HFRVKVRAMDKGDPP 1118
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
+++P F+ Y+A V + GT ++ ++A DAD G N++I YS G+ G+F ID+
Sbjct: 310 LHSPHFTQLRYEANVPDTTAPGTELLQVRAVDAD-RGANAEIHYSFLKGNSDGFFNIDS 367
Score = 35.4 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY--SVRGGDGLG-YFTID 58
N PVF Y+A + EN P GT VI + A D D G + ++SY SV G + F +D
Sbjct: 1555 NRPVFEADPYKAFLTENMPGGTTVIQVTANDQD-TGSDGQVSYRLSVEPGSNIHELFAVD 1613
Query: 59 NE 60
+E
Sbjct: 1614 SE 1615
>gi|156365971|ref|XP_001626915.1| predicted protein [Nematostella vectensis]
gi|156213808|gb|EDO34815.1| predicted protein [Nematostella vectensis]
Length = 850
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 56/117 (47%), Gaps = 19/117 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y TV EN P+GT ++ + A DAD G N+ ++YSV GD G
Sbjct: 110 NNPVFNPTNYSTTVFENSPVGTSLLDVTATDAD-SGQNAYVTYSVTAGDSHGL------- 161
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
FR V + GT I V LDRE+ YNLT+ A D G P T A
Sbjct: 162 ----FRAVTKVSNHGT------IEVAGNLDREVNDF-YNLTITATDGGVPISRTAIA 207
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y ATV EN P+GT V + A D D G+NS+I YS+ GGDG+
Sbjct: 639 NQPQFNQSEYSATVLENMPVGTKVTMVTARDED-SGINSQIMYSLTGGDGV--------- 688
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I + K ++RE A Y++T+ A D+GTP
Sbjct: 689 ---------FSIEPSTGQ----IRLQKAINRE-AKENYHVTITASDRGTP 724
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 2 NAPVFSDFVYQATVKE-NQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVF+ VY+ T+ E N G V+ + A DAD N ++Y++ G LG FTI+
Sbjct: 742 NPPVFTSRVYERTMSEGNAAAGEFVVQVNATDADVE-RNGHVTYTIMHG-ALGMFTIN 797
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 21/119 (17%)
Query: 4 PVFSDFVYQATVKENQPI-GTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
PVF+ Y AT E G L+ T+KA D+D G N + YS+ G+ + +
Sbjct: 1 PVFTPASYNATFTEGSSTRGVLIATVKATDSD-DGANGDVDYSIVDGN------VGDPRS 53
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ F +DP T I + L+R+ YNLT+ A D G P ++ AT R
Sbjct: 54 NSDF-----TLDPNTGM----IKTARNLERQ-QTFSYNLTIGAADHGLP---SFSATTR 99
>gi|345321313|ref|XP_001521839.2| PREDICTED: protocadherin Fat 1-like, partial [Ornithorhynchus
anatinus]
Length = 1477
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 42/116 (36%), Positives = 57/116 (49%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+++PVF+ F V+E+ P+GT V+TL A D D G + +I YS+R G GLG F ID E
Sbjct: 1119 LHSPVFASFAVGGVVREDAPVGTSVLTLSAQDED-VGRDGRIRYSIRDGSGLGVFRIDEE 1177
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
GT I LDRE Y LT+ A D+G P ++
Sbjct: 1178 --------------KGT------IETAAQLDRETMT-HYWLTVYATDQGATPLSSF 1212
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
V E P+G++V L A+DAD G + K+ Y++ GG+ G+FT+D E L
Sbjct: 816 VSEAVPVGSVVAQLNASDADC-GYDGKVVYALSGGNDAGHFTVDVESGL----------- 863
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ VL LDRE A Y L + A D G P R ++
Sbjct: 864 ---------LRVLSPLDRE-AQDEYTLNVTAFDLGIPQRAAWR 896
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+AT EN P GT V+ ++A+D D G + +++YS
Sbjct: 547 HAPEFAQAAYRATFDENAPAGTSVVRVEASDLD-TGEDGQVTYS---------------- 589
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
L P +DP T + + + LD E+ P Y + +RA D+G P R
Sbjct: 590 -LAQAVPGPFSVDPFTGE----VRTTEALDYELVPRIYTIRVRASDRGRPFR 636
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 37/106 (34%), Positives = 50/106 (47%), Gaps = 7/106 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F QA V +Q +G V TL A DAD + + Y + GD LG F +D
Sbjct: 653 NAPLFERVDCQAAVPRDQALGVPVATLSAIDADELQL---VRYRLDAGDPLGLFHLDPGS 709
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIA--PLGYNLTLRA 105
+ R P PG +++ VL D E A PL N+T+ A
Sbjct: 710 GVLSLR-QPLGSGPGAPTGPFDLRVLA-TDGEHASVPLRINVTVTA 753
Score = 38.5 bits (88), Expect = 0.88, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
PL FR + ++ PG +E+ I +K LD P G+NL+L+A D G+PPR
Sbjct: 384 PLGLFRAI--RVAPG--GREFWIQSIKALDWARHPAGFNLSLQAQDGGSPPR 431
Score = 35.8 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
NAP+ + VY V EN P V+ ++A+D P ++S+ + G+ G+F I
Sbjct: 1225 NAPLTTQRVYHPAVPENSPKDVSVVQIEASD---PDAGDQLSFRITSGNPQGFFAI 1277
>gi|431899688|gb|ELK07642.1| Protocadherin Fat 4 [Pteropus alecto]
Length = 2137
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 55/117 (47%), Gaps = 23/117 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y ++ EN P+G+ V+ DAD G+NS+++YS+ GD LG F +D G
Sbjct: 285 NPPVFSLNSYSTSLMENLPLGSTVLVFNVTDADD-GINSQLAYSIASGDSLGQFAVDKNG 343
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
L VLK LDRE Y+L ++ D PP + A
Sbjct: 344 VL---------------------TVLKSLDRESQSF-YSLVVQVHDLPPPPAKNSTA 378
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 51/108 (47%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+FS VY + E P+GT V + A D+D S+ SY + G+ G F+
Sbjct: 1747 PIFSLTVYSVQISEGVPMGTHVTFVSAFDSDSVPSWSRFSYFIGSGNENGAFS------- 1799
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I P T + I V LDRE P+ YNLT+ AVD GTP
Sbjct: 1800 ---------IHPQTGQ----ITVTAELDRETLPV-YNLTVLAVDSGTP 1833
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F+ +Y+ + E+ GT V+ + AADAD G N ++ Y + G+ F ID+
Sbjct: 493 NSPAFAQALYRVEMSEDTLTGTDVVQVCAADAD-EGTNGQVRYGIVDGNADQDFRIDSVT 551
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ V + LDRE Y LT++A D+G+ PR
Sbjct: 552 GA--------------------VTVARPLDREKTST-YLLTVQAADRGSTPR 582
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ +Y V E+ P GT V+ + A+DAD N+ ISY + GG+ FT
Sbjct: 703 NIPTFASKMYFTAVPEDAPTGTDVLLVNASDAD-ASTNAVISYRIIGGN--SQFT----- 754
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I+ LLDRE Y L + A D G+P
Sbjct: 755 -----------INPSTGQ----IITSALLDRETKD-NYTLVVVASDAGSP 788
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF Y TV EN P GT VI L A DAD G N+ I+Y+V+ D F ID
Sbjct: 1535 NSPVFLPDEYLPTVLENAPSGTTVIHLNATDAD-SGTNAVIAYAVQSSDS-DLFVID 1589
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 47/113 (41%), Gaps = 25/113 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y V +N +GT +I + A D G+NS++ Y V G + G F +DN
Sbjct: 1324 NAPQFLKMKYFTPVTKNVKVGTKLIKVTAVDDKDFGLNSEVEYFVSGENHSGKFKLDN-- 1381
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYN--LTLRAVDKGTPP 112
N + + I+ L N +T+ A DKG PP
Sbjct: 1382 ---------------------NTGWISVASSLISDLNQNFLITVTAKDKGNPP 1413
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 49/121 (40%), Gaps = 22/121 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS A + E+ IG +V T+ A D D MN I YS+ G+ G F I++
Sbjct: 1430 HTPEFSQTHVTAALPESHSIGAMVRTVSARDRD-AAMNGVIRYSISSGNEGGVFAINSST 1488
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ + + K LD E+ + +T+ A D G R Y +
Sbjct: 1489 GV--------------------LTLAKALDYELCQ-KHEMTVSATDGGWVARTGYCSVTV 1527
Query: 122 N 122
N
Sbjct: 1528 N 1528
>gi|332234442|ref|XP_003266417.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2 [Nomascus
leucogenys]
Length = 4007
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 41/109 (37%), Positives = 54/109 (49%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y V EN +G +++T+ A D D P +NS I+YS+ GG+ LG+FTI
Sbjct: 2978 PQFPQDPYSTRVLENALVGDVILTVSATDEDGP-LNSDITYSLVGGNQLGHFTI------ 3030
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+ + V K LDRE A Y+L LRA D G PP
Sbjct: 3031 --------------HPKKGELQVAKALDREQAS-SYSLKLRATDSGQPP 3064
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ FV+Q V+EN P GT V+ + A D D G++ ++ Y +R G GL F+I+ +
Sbjct: 1027 LHPPHFASFVHQGQVQENSPSGTQVMVVAARD-DDSGLDGELQYFLRAGTGLAAFSINQD 1085
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I L LDRE A Y LT+ AVD+G+ P
Sbjct: 1086 TGM--------------------IQTLAPLDREFASY-YWLTVLAVDRGSVP 1116
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 32/60 (53%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y+ +V EN G LV TLK DAD N +++ + GD LG F I G
Sbjct: 2561 NAPRFASEEYRGSVVENSEPGELVATLKTLDADISEQNRQVTCYITEGDPLGQFGISQVG 2620
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP+F+ Y T+ EN P GT V+ + A D D G N ++YS+ G L
Sbjct: 454 HAPLFNRSSYDGTLDENIPPGTSVLAVTATDRD-HGENGYVTYSIAGPKAL--------- 503
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P IDP I K +D E+ Y +RA D G+P R
Sbjct: 504 --------PFSIDPYLGI----ISTSKPMDYELMKRIYTFRVRASDWGSPFR 543
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 45/111 (40%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y TV+EN PIG+ V+ L +D D P S+ + G+ F + +G
Sbjct: 3081 NPPRFFQLNYSTTVQENSPIGSKVLQLILSDPDSPENGPPYSFRITKGNNGSAFRVTPDG 3140
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L V + L+R A Y L ++A D G PP
Sbjct: 3141 WL---------------------VTAEGLNRR-AQEWYQLQIQASDSGIPP 3169
Score = 39.3 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLG---YFTID 58
N PVF Y+A + EN P+GT VI + A D D G + ++SY + G F ID
Sbjct: 2452 NRPVFEADPYKAVLTENMPVGTSVIQVTAIDKD-TGRDGQVSYRLSADPGSNVHELFAID 2510
Query: 59 NE 60
+E
Sbjct: 2511 SE 2512
Score = 39.3 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N P S V+ +++E+ P+GT V+ L A D D K+++++ G+ +G+F I
Sbjct: 1133 NPPQMSQAVFYPSIQEDAPVGTSVLQLDAWDPDSSS-KGKLTFNITSGNHMGFFMI 1187
Score = 38.9 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++ P F+ Y+A+V + GT ++ ++A DAD G+N+++ YS+ G+ G+F I+
Sbjct: 1550 LHPPRFTQLHYEASVPDTIAPGTELLQVRAMDAD-RGVNAEVHYSLLKGNSEGFFNIN 1606
Score = 35.0 bits (79), Expect = 9.6, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 9/65 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F + ++ ++ P+G ++T+ A D D + Y + G+ LGYF
Sbjct: 560 NQPMFEEVNCTGSIHQDWPVGKSIMTMSAIDVDEL---QNLKYEIVSGNELGYFD----- 611
Query: 62 PLNHF 66
LNHF
Sbjct: 612 -LNHF 615
>gi|47209330|emb|CAF93465.1| unnamed protein product [Tetraodon nigroviridis]
Length = 922
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 53/201 (26%), Positives = 81/201 (40%), Gaps = 86/201 (42%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY----------------- 44
NAPVFS VY++++ EN P+ TLVIT+ AADAD G+NS+I+Y
Sbjct: 356 NAPVFSQSVYKSSLPENSPLDTLVITVSAADAD-EGVNSEITYGFDHVLEDENVFLLDTK 414
Query: 45 --------------------SVRGGDGLG---YFT-------IDNEGPLNHFRI----VP 70
+ DGLG Y T +++ P+ H + +P
Sbjct: 415 TGVVRVNGAIDYEKIPSYEMQISAKDGLGLVAYATLIIEITDVNDNAPVIHLKSLTNPIP 474
Query: 71 TKIDPGTK---------------------------------KKEYNIVVLKLLDREIAPL 97
+ PG++ K Y++V LDRE+
Sbjct: 475 ENVSPGSEVGIINVQDRDSENNRQVRCSIQQNVPFKLVASIKNYYSLVTTGQLDRELVS- 533
Query: 98 GYNLTLRAVDKGTPPRETYKA 118
YN+T+ A D+G+PP + K+
Sbjct: 534 DYNITISATDEGSPPLSSSKS 554
>gi|119625021|gb|EAX04616.1| FAT tumor suppressor homolog 1 (Drosophila), isoform CRA_c [Homo
sapiens]
Length = 2228
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 43/112 (38%), Positives = 55/112 (49%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y + E+ + VIT+ A DAD P NS I YS+ G+ FTID
Sbjct: 1721 NTPVFSQDTYTTVISEDAVLEQSVITVMADDADGPS-NSHIHYSIIDGNQGSSFTID--- 1776
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P + + + V KLLDRE GY LT++A D G+PPR
Sbjct: 1777 --------PVRGE---------VKVTKLLDRETIS-GYTLTVQASDNGSPPR 1810
Score = 51.6 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N +++Y + GGD LG F ++
Sbjct: 1306 PRFTAEIYKGTVSEDDPQGGVIAILSTTDADSEEINRQVTYFITGGDPLGQFAVE----- 1360
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
T + E+ + V K LDRE Y LT+ A D
Sbjct: 1361 -------------TIQNEWKVYVKKPLDREKRD-NYLLTITATD 1390
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 44/119 (36%), Positives = 58/119 (48%), Gaps = 25/119 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP FS Y TV EN GTL+ ++A DAD G+N KI YS + D G F+I+
Sbjct: 1511 NAPEFSADPYAITVFENTEPGTLLTRVQATDAD-AGLNRKILYSLIDSAD--GQFSINEL 1567
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I + K LDRE+ + Y L+L+AVD+G P R T T
Sbjct: 1568 SGI--------------------IQLEKPLDRELQAV-YTLSLKAVDQGLPRRLTATGT 1605
Score = 43.1 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ +GT V+ + AA D N++I+YS+ G+ G F+ID+
Sbjct: 1616 NPPVFEYREYGATVSEDILVGTEVLQVYAASRDIEA-NAEITYSIISGNEHGKFSIDS-- 1672
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + Y LT+ A D GTP
Sbjct: 1673 ------------------KTGAVFIIENLDYE-SSHEYYLTVEATDGGTP 1703
Score = 42.4 bits (98), Expect = 0.062, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P+F +Y+A + E+ P G V +KA DAD ++ K+ YS+ G+ +F ID+
Sbjct: 776 NPPLFEQQIYEARISEHAPHGHFVTCVKAYDADSSDID-KLQYSILSGNDHKHFVIDS 832
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N+PVF Y+A + EN P G+ VI ++A+DAD G N ++ YS+
Sbjct: 1195 NSPVFESSPYEAFIVENLPGGSRVIQIRASDAD-SGTNGQVMYSL 1238
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 56/114 (49%), Gaps = 10/114 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y ++EN+P+G V+ L D D +++ G+ F ++ +G
Sbjct: 1826 NAPVFSRGNYSVIIQENKPVGFSVLQLVVTDEDSSHNGPPFFFTIVTGNDEKAFEVNPQG 1885
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR---EIAPLGYNLTLRAVDKGTPP 112
++ T K+K++ ++ +K+ D +++ L Y + +R +++ P
Sbjct: 1886 ------VLLTSSAIKRKEKDHYLLQVKVADNGKPQLSSLTY-IDIRVIEESIYP 1932
Score = 36.2 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 20/110 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y T+ E IGT V+ ++A D+D N ISY + G +
Sbjct: 669 NPPVFAQQSYAVTLSEASVIGTSVVQVRATDSDSEP-NRGISYQMFGNHSKSH------- 720
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+HF +D T I +L+ LD E + + +RAVD G P
Sbjct: 721 --DHFH-----VDSSTGL----ISLLRTLDYE-QSRQHTIFVRAVDGGMP 758
>gi|297293817|ref|XP_001091341.2| PREDICTED: protocadherin Fat 1, partial [Macaca mulatta]
Length = 1603
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 40/116 (34%), Positives = 58/116 (50%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVFS FV + VKE+ P+G+LV+T+ A D D G + +I YS+R G G+G F I E
Sbjct: 1029 LHPPVFSSFVERGVVKEDAPVGSLVMTVSAHDED-AGRDGEIRYSIRDGSGVGVFKIGEE 1087
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE + Y LT+ A D+G P ++
Sbjct: 1088 TGI--------------------IETSDRLDRE-STSHYWLTVFATDQGVVPLSSF 1122
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/112 (35%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A EN PIGT V++L A D D G N ++YS+
Sbjct: 459 NPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPD-EGENGYVTYSITN------------- 504
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
LNH VP ID T + + LD E+ P Y L +RA D G P R
Sbjct: 505 -LNH---VPFVIDHFTGA----VSTSENLDYELMPRVYTLRIRASDWGLPYR 548
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 10 VYQATVKENQPIGTLV-ITLKAADADPPGMNSKISYSVRGGDG-LGYFTIDNEGPLNHFR 67
V+ E P+ T V ++ D DP + +G +G + +I L FR
Sbjct: 245 VHIEQANECAPVITAVTLSPSELDRDPTYAIVTVDDCDQGANGEIASLSIVAGDLLQQFR 304
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
V + PG+K EY + + +D + P GYNLTL+A DKGTPP+
Sbjct: 305 TV--RSFPGSK--EYKVKAISGVDWDSHPFGYNLTLQAKDKGTPPQ 346
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKENQP+G+ VI + + D D G N K+ Y++ GG+ F ID E +
Sbjct: 726 VKENQPVGSSVIFMNSTDLD-TGFNGKLVYAISGGNEDSCFMIDMETGM----------- 773
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ +L LDRE Y L + D G P + ++
Sbjct: 774 ---------LKILSPLDRETTD-KYTLNITVYDLGIPQKAAWR 806
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ V+E+ P GT+++ L+A D D + ++ YS+ G G F +D
Sbjct: 923 NPPKFIPPNYRVKVREDLPEGTVIMWLEAHDPD-LAQSGQVRYSLM-DHGEGNFDVD--- 977
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT+RA DKG P
Sbjct: 978 -----------------KLSGAVRIVQQLDFEKKQV-YNLTVRAKDKGKP 1009
>gi|326914508|ref|XP_003203567.1| PREDICTED: protocadherin Fat 3-like [Meleagris gallopavo]
Length = 3426
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 55/111 (49%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS VY A + E+ IG VI L A D D P N +I +S+ GD DNE
Sbjct: 2207 NAPKFSQVVYSAVISEDAAIGDSVIMLIAEDLDSPS-NGQIHFSIVSGDQ------DNE- 2258
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+DPG+ + V K LDRE GY+L ++A D GTPP
Sbjct: 2259 ---------FSVDPGSGL----VKVKKKLDRERIS-GYSLVIQARDSGTPP 2295
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF VY+ +VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 1790 NAPVFEHEVYRGSVKESDPPGEVVAVLSTWDEDTSDVNRQVSYHITGGNPKGKFAL---- 1845
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 1846 --------------GLVQNEWKVYVKRPLDREEQDI-YYLNITATD 1876
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+PVFS VY A V+EN GT V+ +KA D D G+ +ISYS+ F ID+ G
Sbjct: 1363 SPVFSQSVYVAEVRENAAPGTKVLHVKATDGD-SGVYGQISYSIINDFAKDRFLIDSNGQ 1421
Query: 63 L 63
+
Sbjct: 1422 I 1422
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 25/109 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A V EN L+ ++A D D G+N K++YS+ GYF++D
Sbjct: 1997 NPPVFSSDHYTACVYENTATKALLTRVQATDPD-VGVNRKVTYSL-ADSADGYFSVD--- 2051
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKL-LDREIAPLGYNLTLRAVDKG 109
+ I++L+ LDRE+ YN++++A D+
Sbjct: 2052 ------------------RSSGIIILEHPLDRELQS-SYNISVKASDQS 2081
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D++
Sbjct: 1260 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYSILSGNDRTSFIMDSKS 1318
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 47/113 (41%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG--DGLGYFTIDN 59
N PVF Y AT+ E IGT V+ + A DAD N + Y + + YF ID+
Sbjct: 1153 NPPVFDQSAYNATLSEASLIGTPVLQVVATDADSDN-NKIVQYQIVQDTFNSTDYFHIDS 1211
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L I+ ++LD E+ +L +RA D G PP
Sbjct: 1212 TSGL--------------------ILTARMLDHELIQ-QCSLKVRATDNGFPP 1243
Score = 38.9 bits (89), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D ++++ G+ FT+D G
Sbjct: 2312 NSPVFTPANYTAVIQENKPVGTSILQLVVTDKDSFHNGPPFTFTILTGNEEEEFTLDPNG 2371
Query: 62 PL 63
L
Sbjct: 2372 VL 2373
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 58/112 (51%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F+ +Y+A+V E+ +G+ V+ + A D D G N+++ Y++ G N G
Sbjct: 432 HSPYFTSPLYEASVYESAAVGSAVLQVTALDKD-KGENAELVYTIEAG---------NTG 481
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVDKGTPP 112
N F+I P I+ L L + ++ +G + L+++ D+G+PP
Sbjct: 482 --NTFKIEPV----------LGIITL-LKEPDLTTMGQFVLSVKVADQGSPP 520
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL----GYFTI 57
N P+F Y A + E PIGT ++ +KA D D N +++Y++ L FTI
Sbjct: 1680 NKPMFETASYDAIIMEGMPIGTKLMQVKAVDVDSSA-NGQVTYTLAVESELEKITEAFTI 1738
Query: 58 D-NEGPLNHFRIVPTKIDP 75
D N G ++ + + + DP
Sbjct: 1739 DSNSGWISTLKDLDHEKDP 1757
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 43/108 (39%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y A E+ P +++ + A DAD G N +I YS+ G +F G
Sbjct: 1895 NSPVCEQVAYTALFPEDIPSNKVILKISAKDAD-IGSNGEIRYSLYGPGNNKFFLDPENG 1953
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
L L LDRE P+ YNL RA D G
Sbjct: 1954 ELKS---------------------LAPLDREKIPV-YNLVARATDGG 1979
Score = 35.4 bits (80), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N PVF Y TV E+ GT V+++ A D G N++I+Y +R G+ G F I+++
Sbjct: 2102 NPPVFERRDYLVTVPEDTSPGTEVLSVFATSQDI-GTNAEITYLIRSGNEKGKFNINSK 2159
>gi|345307957|ref|XP_001508966.2| PREDICTED: protocadherin Fat 2 [Ornithorhynchus anatinus]
Length = 4144
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 43/112 (38%), Positives = 59/112 (52%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ FV + +V+EN P GTLV+T A D D PG + ++ Y +R G GL F+ID+E
Sbjct: 1022 LHPPHFASFVSRGSVQENSPRGTLVMTAAAQDPD-PGRDGELQYFLREGTGLATFSIDHE 1080
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
GT I + LDRE P Y LT+ AVD G+ P
Sbjct: 1081 --------------TGT------IRTVGPLDRERTP-HYWLTVLAVDLGSVP 1111
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 22/108 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y ++E+ +G ++TL A D D P MNS ++YS+ GGD P
Sbjct: 3314 PKFTQELYSTDIREDAAVGETILTLTAVDEDGP-MNSNVTYSLVGGD-----------PQ 3361
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
HF I P K I V + LD E P Y+LT+RA D G P
Sbjct: 3362 GHFAIHP---------KRGEIHVARPLDWEETP-SYHLTVRATDNGQP 3399
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 32/56 (57%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
NAP F+ VY+ +V EN G L+ TL+ DAD N +++ + GD LG F I
Sbjct: 2897 NAPRFTSEVYRGSVIENSEPGQLIATLRTLDADISEQNRQVACYITEGDPLGQFDI 2952
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTID 58
N PVFS VY A+V E P T VI L AAD D G N +SY + G D +F +D
Sbjct: 2263 NPPVFSQTVYTASVSEGLPAHTPVIRLLAADRD-SGRNGAVSYQIVEDGSDASEFFQVD 2320
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP+FS Y T EN GT V+T+ A D D G N ++YS+
Sbjct: 451 HAPMFSQSSYHGTFDENISPGTSVLTVTATDND-SGENGFVTYSIA-------------- 495
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+ + VP IDP + I KL+D E+ Y+ + A D G+P R+
Sbjct: 496 ---YPKSVPFSIDPYSGI----ISTSKLMDYELMQRLYHFQVWASDWGSPFRQ 541
Score = 38.9 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG-GDGLG-YFTIDN 59
N PVF Y+A + EN P+GT VI + A D D G + +++YS+ D +G F ID
Sbjct: 2789 NQPVFEADPYKAFLMENMPVGTTVIQVTANDQD-TGSDGQVTYSLAAESDWVGELFAIDR 2847
Query: 60 E 60
E
Sbjct: 2848 E 2848
Score = 38.5 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y +V+ N G VI + A DAD G+N+ ++YSV + L I+
Sbjct: 2576 NPPQFKASEYTVSVQSNVGKGAPVIQVLAYDAD-EGLNADVTYSVDSLEDLEEEVIE--- 2631
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I+P T + ++KL +R ++ +RA D GTP R++
Sbjct: 2632 -----------INPATGMVKVRESLIKLENR-----AFDFNIRARDGGTPQRDS 2669
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 14/102 (13%)
Query: 21 IGTLVITLKAADADPPGM------NSKISYS---VRGGDG-LGYFTIDNEGPLNHFRIVP 70
+ +LV+ ++AA PP + +S ++Y+ V GD + I P HFR+V
Sbjct: 242 LASLVVQVEAALRKPPAIKSITVVDSDLAYATLVVEAGDAEVSAVDIVEGDPGKHFRVV- 300
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+P ++ +V ++ ++ G+NL+LRA D PP
Sbjct: 301 ---EPAVGSDKFTVVSVREINWMEHSSGFNLSLRARDGSKPP 339
Score = 35.4 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P +Y V E+ P G ++ + A DAD G+N++++YS+ G
Sbjct: 3002 NSPKCRQILYTGRVAEDVPPGHFILQVSAVDAD-AGVNAQVTYSLHGPGA---------- 3050
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ FR +DP T + + L LDRE Y+L +A D G
Sbjct: 3051 --DEFR-----LDPYTGE----LFTLTALDREEKDR-YHLVAKATDGG 3086
>gi|229442271|gb|AAI72778.1| FAT tumor suppressor 2 precursor [synthetic construct]
Length = 1258
Score = 58.5 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 41/109 (37%), Positives = 54/109 (49%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y V EN +G +++T+ A D D P +NS I+YS+ GG+ LG+FTI
Sbjct: 228 PQFPQDPYSTRVLENALVGDVILTVSATDEDGP-LNSDITYSLIGGNQLGHFTI------ 280
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+ + V K LDRE A Y+L LRA D G PP
Sbjct: 281 --------------HPKKGELQVAKALDREQAS-SYSLKLRATDSGQPP 314
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 44/111 (39%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y TV+EN PIG+ V+ L +D D P S+ + G+ F + +G
Sbjct: 331 NPPRFFQLNYSTTVQENSPIGSKVLQLILSDPDSPENGPPYSFRITKGNNGSAFRVTPDG 390
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L V + L R A Y L ++A D G PP
Sbjct: 391 WL---------------------VTAEGLSRR-AQEWYQLQIQASDSGIPP 419
>gi|162417991|ref|NP_001104793.1| protocadherin Fat 3 precursor [Gallus gallus]
Length = 4557
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 55/111 (49%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS VY A + E+ IG VI L A D D P N +I +S+ GD DNE
Sbjct: 3338 NAPKFSQVVYSAVISEDAAIGDSVIMLIAEDLDSPS-NGQIHFSIVSGDQ------DNE- 3389
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+DPG+ + V K LDRE GY+L ++A D GTPP
Sbjct: 3390 ---------FSVDPGSGL----VKVKKKLDRERIS-GYSLVIQARDSGTPP 3426
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 50/109 (45%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F+ID E +
Sbjct: 1042 PYFPDFAVIGSVKENSRIGTSVLQVVARDEDS-GRDGEIQYSIRDGSGLGRFSIDEETGV 1100
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I +LDRE Y LT+ A D G P
Sbjct: 1101 --------------------IYTADVLDRETTK-SYWLTVYATDHGVVP 1128
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF VY+ +VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 2921 NAPVFEHEVYRGSVKESDPPGEVVAVLSTWDEDTSDVNRQVSYHITGGNPKGKFAL---- 2976
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 2977 --------------GLVQNEWKVYVKRPLDREEQDV-YYLNITATD 3007
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+PVFS VY A V+EN GT V+ +KA D D G+ +ISYS+ F ID+ G
Sbjct: 2494 SPVFSQSVYVAEVRENAAPGTKVLHVKATDGD-SGVYGQISYSIINDFAKDRFLIDSNGQ 2552
Query: 63 L 63
+
Sbjct: 2553 I 2553
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 25/109 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A V EN L+ ++A D D G+N K++YS+ GYF++D
Sbjct: 3128 NPPVFSSDHYTACVYENTATKALLTRVQATDPD-VGVNRKVTYSL-ADSADGYFSVD--- 3182
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKL-LDREIAPLGYNLTLRAVDKG 109
+ I++L+ LDRE+ YN++++A D+
Sbjct: 3183 ------------------RSSGIIILEHPLDRELQS-SYNISVKASDQS 3212
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 50/116 (43%), Gaps = 23/116 (19%)
Query: 3 APVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
AP F F V E+ P+G ++ +KA DAD G N K+ Y++ G+ F ID
Sbjct: 723 APHFDKTFPTDVMVSEDLPVGATILRIKAYDAD-SGFNGKVVYTISDGNADSCFNID--- 778
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
I+ G K VL LDRE L Y L + D G P + ++
Sbjct: 779 -----------IETGVLK------VLMPLDREKTDL-YILNITIYDLGNPQKSAWR 816
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D++
Sbjct: 2391 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYSILSGNDRTSFIMDSKS 2449
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 47/113 (41%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG--DGLGYFTIDN 59
N PVF Y AT+ E IGT V+ + A DAD N + Y + + YF ID+
Sbjct: 2284 NPPVFDQSAYNATLSEASLIGTPVLQVVATDADSDN-NKIVQYQIVQDTFNSTDYFHIDS 2342
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L I+ ++LD E+ +L +RA D G PP
Sbjct: 2343 TSGL--------------------ILTARMLDHELIQ-QCSLKVRATDNGFPP 2374
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F Y + V E+ P+G V+ + A D D G N I+YS+ + L +
Sbjct: 469 HTPEFQQTSYSSFVNESVPVGFSVLAVSAVDKD-RGENGYITYSIASLNSLPFI------ 521
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 522 -INQFTGV--------------ISTSEELDFESSPESYRFIVRASDWGSPYRH 559
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D ++++ G+ FT+D G
Sbjct: 3443 NSPVFTPANYTAVIQENKPVGTSILQLVVTDKDSFHNGPPFTFTILTGNEEEEFTLDPNG 3502
Query: 62 PL 63
L
Sbjct: 3503 VL 3504
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 37/78 (47%), Gaps = 16/78 (20%)
Query: 37 GMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIA 95
G N +I S S+ GD PL F + I G EY I K +D +
Sbjct: 293 GANGEIESVSIVAGD-----------PLEQFFL----IKEGKWMNEYKIKERKPIDWDSF 337
Query: 96 PLGYNLTLRAVDKGTPPR 113
P GYNLTL+A DKG+P +
Sbjct: 338 PYGYNLTLQAKDKGSPQK 355
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL----GYFTI 57
N P+F Y A + E PIGT ++ +KA DAD N +++Y++ L FTI
Sbjct: 2811 NKPMFETASYDAIIMEGMPIGTKLMQVKAVDADSSA-NGQVTYTLAVESELEKITEAFTI 2869
Query: 58 D-NEGPLNHFRIVPTKIDP 75
D N G ++ + + + DP
Sbjct: 2870 DSNSGWISTLKDLDHEKDP 2888
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 58/112 (51%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F+ +Y+A+V E+ +G+ V+ + A D D G N+++ Y++ G N G
Sbjct: 1563 HSPYFTSPLYEASVYESAAVGSAVLQVTALDKD-KGENAELVYTIEAG---------NTG 1612
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVDKGTPP 112
N F+I P I+ L L + ++ +G + L+++ D+G+PP
Sbjct: 1613 --NTFKIEPV----------LGIITL-LKEPDLTTMGQFVLSVKVADQGSPP 1651
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP+ S+ +Y +V EN P VI ++A D D N K++Y + G+ +F I+
Sbjct: 1145 NAPLTSEPIYYPSVMENSPKDVSVIQIQAQDPD-SSTNEKLAYRITSGNPQNFFVIN 1200
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F ID
Sbjct: 934 SPAFIPSSYNVKVLEDLPVGTVIAWLETHDPD-LGLGGQVRYSLV-NDYNGRFEID---- 987
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 988 ----------------KASGAIRLSKELDYEKQQF-YNLTVRAKDKGRP 1019
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N PVF Y TV E+ GT V+++ A D G N++I+Y +R G+ G F I+++
Sbjct: 3233 NPPVFERRDYLVTVPEDTSPGTEVLSVFATSQDI-GTNAEITYLIRSGNEKGKFNINSK 3290
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 42/108 (38%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y A E+ P +++ + A DAD G N I YS+ G +F G
Sbjct: 3026 NSPVCEQVAYTALFPEDIPSNKVILKISAKDAD-IGSNGDIRYSLYGPGNNKFFLDPENG 3084
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
L L LDRE P+ YNL RA D G
Sbjct: 3085 ELKS---------------------LAPLDREKIPV-YNLVARATDGG 3110
>gi|402871012|ref|XP_003899484.1| PREDICTED: protocadherin Fat 1-like [Papio anubis]
Length = 1188
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVFS FV + VKE+ P+G+LV+T+ A D D G + +I YS+R G G+G F I E
Sbjct: 1029 LHPPVFSSFVERGAVKEDAPVGSLVMTVSAHDED-AGRDGEIRYSIRDGSGVGVFKIGEE 1087
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A E+ PIGT V++L A D D G N ++YS+
Sbjct: 459 NPPEFTQTAYKAAFDESVPIGTTVMSLSAVDPD-EGENGYVTYSITN------------- 504
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
LNH VP ID T + + LD E+ P Y L +RA D G P R
Sbjct: 505 -LNH---VPFVIDHFTGA----VSTSENLDYELMPRVYTLRIRASDWGLPYR 548
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKENQP+G+ VI + + D D G N K+ Y++ GG+ F ID E +
Sbjct: 726 VKENQPVGSSVIFMNSTDLD-TGFNGKLVYAISGGNEDSCFMIDMETGM----------- 773
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ +L LDRE Y L + D G P + ++
Sbjct: 774 ---------LKILSPLDRETTD-KYTLNITVYDLGIPQKAAWR 806
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 10 VYQATVKENQPIGTLV-ITLKAADADPPGMNSKISYSVRGGDG-LGYFTIDNEGPLNHFR 67
V+ E P+ T V ++ D DP + +G +G + +I L FR
Sbjct: 245 VHIEQANECAPVITAVTLSPSELDRDPTYAIVTVDDCDQGANGEIASLSIVAGDLLQQFR 304
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
V + PG+K EY + + +D + P GYNLTL+A DKGTPP+
Sbjct: 305 TVRSF--PGSK--EYKVKAISGVDWDSHPFGYNLTLQAKDKGTPPQ 346
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 23/101 (22%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
Y+ V+E+ P GT+++ L+A D D G + ++ YS+ G G F +D
Sbjct: 932 YRVKVREDLPEGTVIMWLEAHDPD-LGQSGQVRYSLM-DHGEGNFDVD------------ 977
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT+RA DKG P
Sbjct: 978 --------KLSGAVRIVQQLDFEKKQV-YNLTVRAKDKGKP 1009
>gi|326914512|ref|XP_003203569.1| PREDICTED: protocadherin Fat 3-like, partial [Meleagris gallopavo]
Length = 1203
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 52/112 (46%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+ AP F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F+ID E
Sbjct: 1039 LYAPYFPDFAVIGSVKENSRIGTSVLQVVARDED-SGRDGEIQYSIRDGSGLGRFSIDEE 1097
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I +LDRE Y LT+ A D G P
Sbjct: 1098 TGV--------------------IYTADVLDRETTK-SYWLTVYATDHGVVP 1128
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 50/117 (42%), Gaps = 23/117 (19%)
Query: 2 NAPVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
AP F F V E+ P+G ++ +KA DAD G N ++ Y++ G+ F ID
Sbjct: 722 QAPHFDKTFPTDVMVSEDLPVGATILRIKAYDAD-SGFNGRVVYTISDGNADSRFNID-- 778
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
I+ G K VL LDRE L Y L + D G P + ++
Sbjct: 779 ------------IETGVLK------VLMPLDREKTDL-YILNITIYDLGNPQKSAWR 816
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 37/78 (47%), Gaps = 16/78 (20%)
Query: 37 GMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIA 95
G N +I S S+ GD PL F + I G EY I K +D +
Sbjct: 293 GANGEIESVSIVAGD-----------PLEQFFL----IKEGKWMNEYKIKERKPIDWDSF 337
Query: 96 PLGYNLTLRAVDKGTPPR 113
P GYNLTL+A DKG+P +
Sbjct: 338 PYGYNLTLQAKDKGSPQK 355
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F Y + V E+ P+G V+ + A D D G N I+YS+ + L +
Sbjct: 469 HTPEFQQPSYSSFVNESVPVGFSVLAVSAVDKD-RGENGYITYSIASLNSLPFI------ 521
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 522 -INQFTGV--------------ISTSEELDFESSPESYRFIVRASDWGSPYRH 559
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP+ S+ +Y +V EN P VI ++A D D N K++Y + G+ +F I+
Sbjct: 1145 NAPLTSEPIYYPSVMENSPKDVSVIQIQAQDPDSSA-NEKLAYRITSGNPQNFFVIN 1200
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F ID
Sbjct: 934 SPAFIPSSYNVKVLEDLPVGTVIAWLETHDPD-LGLGGQVRYSLV-NDYNGRFEID---- 987
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 988 ----------------KASGAIRLSKELDYEKQQF-YNLTVRAKDKGRP 1019
>gi|380028708|ref|XP_003698032.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-related tumor
suppressor-like [Apis florea]
Length = 4483
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 57/113 (50%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQ--PIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D Y A V EN P G VI +KA DAD P N ++ Y ++
Sbjct: 1743 NAPVFLDSPYLAHVMENMVPPGGGFVIQVKAYDADTPPYNDQVRYFLK------------ 1790
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
EG + FRI + D I +L+ LDRE+ P Y LTL A+D G+PP
Sbjct: 1791 EGDTDLFRINASTGD---------IFLLRPLDRELVP-EYTLTLVAMDTGSPP 1833
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 55/110 (50%), Gaps = 21/110 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y ATV E GT V+T++A D D N++ SYS+ GG+ F
Sbjct: 2904 PEFLQSAYDATVSEGAVHGTRVLTVRAVDKDIKPQNNQFSYSIIGGNIGQAF-------- 2955
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
K+DP T +I K LDRE P+ Y+LT+ A+D G+PP+
Sbjct: 2956 --------KVDPQTG----DIETAKQLDRETIPV-YDLTIGAIDTGSPPQ 2992
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF Y A + E PIG+ V ++ A DAD G+N++I Y + G+ G+F ID +
Sbjct: 501 HEPVFQQSEYSAVLSELSPIGSFVASISATDAD-SGLNARIYYELDSGNEQGWFAIDQDT 559
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
L + + LDRE+ L + A D G P+
Sbjct: 560 GL--------------------VTTIATLDREVQG-SIELHVSARDGGPSPK 590
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 48/106 (45%), Gaps = 23/106 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F + + EN IGT ++++ A D D G N ++ Y+V GGD G F + G
Sbjct: 1425 NAPIFEAGPHAVDIVENTTIGTPILSVTAQDLD-SGDNGRVIYAVAGGDENGDFGVAPNG 1483
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
L KLLDRE PL YNL L A D
Sbjct: 1484 TL---------------------FTRKLLDREQKPL-YNLVLSATD 1507
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 20/101 (19%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
ATV EN ++V + D D G+N + S +R G+ LG+F + + R+
Sbjct: 405 ATVDENAVKDSIVAAITVIDNDE-GLNGETSVEIRAGNELGHFRLQTAATFDVVRV---- 459
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ G LDRE P YNLT+ A DKGTPPR
Sbjct: 460 -NGG-------------LDREEIP-KYNLTVVATDKGTPPR 485
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 20/113 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y V EN +G V+ L A D G+N++ISY + +G YF+ID +
Sbjct: 2478 NAPRFEQRSYLYPVPENYGVGKRVVQLVARDDADFGVNAEISYFLVNVNGSEYFSIDEKS 2537
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+ + + GT + L +RA+DKG PP++
Sbjct: 2538 GWVYIQNALANVRVGTT--------------------FLLKVRAIDKGVPPQK 2570
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF Y ATV EN IG V+ + A D D G N ++ Y + GD FTI +G
Sbjct: 1634 NSPVFDPRQYSATVAENASIGASVLQVSAMDRD-EGANGRVRYGIAMGDDNRDFTISEDG 1692
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P F Y+ V E IGT ++ + DAD G+N + YS+ G+ G F ID
Sbjct: 1217 NIPQFQRLPYRVQVNEGAAIGTQLLRVYTTDAD-EGLNGDVFYSLEDGNQYGRFAID 1272
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F + Y V EN P G+ + + A DAD G NS++SY++
Sbjct: 1319 NAPTFQNTAYSFDVPENMPRGSRIGQVVATDADADGPNSQLSYTL 1363
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F V EN+P GT+++TL A D D P + +Y + GG T+D
Sbjct: 3008 NGPIFDPPEVVGYVNENEPAGTIIMTLSATDPDLPPNGAPFTYKLVGGRQSDMVTLD--- 3064
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
H ++ T + LDRE+ P +L + D G P
Sbjct: 3065 --KHTGVLKTT---------------RSLDREVMP-QLDLVIEVEDSGIP 3096
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
+AP F+ +Q V EN+P+ T ++T+ A D D G N I Y + G+ F +
Sbjct: 2585 HAPTFAAVSHQVRVPENEPVNTTILTVSATDGD-DGPNGMIRYKISAGNEKNEFFV 2639
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 50/117 (42%), Gaps = 27/117 (23%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGY---FTIDN 59
AP FS V Q T+ EN P +LV TL A D D G N ++YS Y F +D
Sbjct: 607 APRFSQNVVQVTLSENTPPQSLVATLTAVDND-QGTNGSVAYSFHSSVPRDYPKTFALDG 665
Query: 60 -EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
G L TK+ LDRE Y + + A D+GTPP+ +
Sbjct: 666 LTGQLT------TKVH---------------LDRETIA-EYRILVIAKDQGTPPQSS 700
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF + Y V E+ P GT V + A DAD N+++ YS+ G G G F +D
Sbjct: 714 NSPVFYPWRYLMAVPEDAPPGTSVGKVMATDADAR-ENAQVRYSLESG-GEGLFAVD 768
Score = 36.2 bits (82), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P+F Y + E+ PIGT V+T++A D D NSK++Y + D FTID
Sbjct: 273 NPPIFQQSDYVVALNESAPIGTKVLTVRATDKDSED-NSKLTYYL--PDTERQFTID 326
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N P F+ VY+A + EN P + V + A D D P + I Y + GG G +F I
Sbjct: 2690 NPPTFNQSVYEAYLPENSPPDSFVYKVIAKDIDSPKY-AVIEYKILGGTGKDHFRI 2744
Score = 35.8 bits (81), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 49/106 (46%), Gaps = 25/106 (23%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GP 62
P F+ Y+ATV EN T V A D D G+N+KI YS+ G+ FT+D E G
Sbjct: 1852 PEFTRQEYRATVTENSVSRTWVTKPHATDKD-EGLNAKIRYSLL-GENSERFTVDPETGE 1909
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK 108
+ F +VP LDRE + Y+LTL A D
Sbjct: 1910 V--FTVVP-------------------LDREQTSV-YHLTLVAQDS 1933
>gi|41224975|dbj|BAD08246.1| KIAA0811 protein [Homo sapiens]
Length = 1123
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 41/109 (37%), Positives = 54/109 (49%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y V EN +G +++T+ A D D P +NS I+YS+ GG+ LG+FTI
Sbjct: 179 PQFPQDPYSTRVLENALVGDVILTVSATDEDGP-LNSDITYSLIGGNQLGHFTI------ 231
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+ + V K LDRE A Y+L LRA D G PP
Sbjct: 232 --------------HPKKGELQVAKALDREQAS-SYSLKLRATDSGQPP 265
Score = 39.7 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 44/111 (39%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y TV+EN PIG+ V+ L +D D P S+ + G+ F + +G
Sbjct: 282 NPPRFFQLNYSTTVQENSPIGSKVLQLILSDPDSPENGPPYSFRITKGNNGSAFRVTPDG 341
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L V + L R A Y L ++A D G PP
Sbjct: 342 WL---------------------VTAEGLSRR-AQEWYQLQIQASDSGIPP 370
>gi|444721940|gb|ELW62647.1| Protocadherin Fat 4 [Tupaia chinensis]
Length = 2300
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 52/106 (49%), Gaps = 23/106 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y ++ EN P+G+ V+ DAD G+NS+++YS+ GD L FT+D +G
Sbjct: 1901 NPPVFSLNSYSTSLMENLPLGSTVLVFNVTDADD-GINSQLAYSIASGDSLEQFTVDQKG 1959
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
L VLK LDRE YNL ++ D
Sbjct: 1960 VLK---------------------VLKALDRESQSF-YNLVVQVHD 1983
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ VY+ + E P G+ V + A D D G+N+ + YS+ G+GLG+F I
Sbjct: 434 PVFAQQVYRVNLSEEAPPGSYVCGVSATDGDS-GLNANLRYSIVSGNGLGWFHIS----- 487
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T G LDRE+A L + A D+G P+ +Y
Sbjct: 488 EHSGLVTTGAAGG-------------LDRELAS-QIVLNISARDQGVHPKVSY 526
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y+ + EN GT +I + AAD D G N ++ Y + G+ F ID+
Sbjct: 2109 NNPVFAQALYKVEINENTLTGTDIIQVLAADGD-EGTNGQVRYGIVEGNANQEFRIDSV- 2166
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
GT I V K LDRE P Y LT++A D+G+ PR
Sbjct: 2167 -------------TGT------ITVAKPLDREKTPT-YLLTVQATDRGSTPR 2198
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N+ I Y ++ +EG
Sbjct: 207 NPPVFGSSHYQAGVPEDAVVGSSVLQVAAADAD-EGTNADIRYRLQ-----------DEG 254
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P ++DP T I V + LD E A Y+LT++A+D+G P
Sbjct: 255 -------TPFQMDPETGL----ITVREPLDFE-ARRQYSLTVQAMDRGVP 292
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 43/96 (44%), Gaps = 17/96 (17%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD P N IS + GG NE HF + +K
Sbjct: 326 ASVDENAQVGTVVALLTVTDADSPAANGNISVQILGG---------NEQ--RHFEVQSSK 374
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK 108
+ P I V LDRE P YNLT+ D
Sbjct: 375 V-PNLSL----IKVASALDRERIP-SYNLTVSVSDN 404
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G N+ + YS+ G + G F+
Sbjct: 1272 NTPSFPKSTLFVDVLENMRIGELVSSVTATDSD-SGDNADLQYSITGTNNHGTFS----- 1325
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A DKG PPR +
Sbjct: 1326 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDKGRPPRSS 1363
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y+ T+ E++P+ + ++A+D D G N +ISY++ G+ F I +G
Sbjct: 953 NPPVFDQLSYEVTLSESEPVNSRFFQVQASDKD-SGANGEISYTIAEGNTGDAFGIFPDG 1011
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D + + +VV DR + PL + + +
Sbjct: 1012 QL----YIKSELDRELQDRYVLVVVAS--DRAVEPLSATVNVTVI 1050
Score = 42.7 bits (99), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 49/110 (44%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
NAP F YQAT+ E+ T V+ + A+D D G N I YSV G+ F ID N
Sbjct: 1167 NAPKFLKDFYQATISESAANLTQVLRVSASDVD-EGSNGLIHYSVIKGNEERQFAIDSNS 1225
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGT 110
G + ++ LD E P Y+L ++AVD GT
Sbjct: 1226 G---------------------QVTLIGTLDYEATP-AYSLVIQAVDSGT 1253
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVFS Y V EN +G V ++ A+ D +NS ISY + GD G F I+
Sbjct: 750 NPPVFSQAAYSFVVFENVALGYHVGSVSASSMD---LNSNISYLITTGDQKGMFAIN 803
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 4 PVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
PVFS Y +V EN P GT ++ L+A D D G N + +S++ + E
Sbjct: 541 PVFSQPEGYNVSVVENSPTGTELLVLRATDGD-LGDNGTVRFSLQ----------EAEAD 589
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
FR +DP + + + + LDRE Y+L + A D G+PP+ +
Sbjct: 590 QRSFR-----LDPVSGR----LSTISSLDREEQAF-YSLLVLATDLGSPPQSS 632
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A ++EN+P G+ + T+ A D D G N + YS+ GD
Sbjct: 646 NSPVFYPVQYFAHIQENEPGGSYITTVSATDPD-LGPNGTVKYSLSAGD 693
>gi|118090437|ref|XP_420680.2| PREDICTED: protocadherin Fat 1 [Gallus gallus]
Length = 4590
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 57/112 (50%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A + E+ + VIT+ A DAD P N+ I Y++ G+ FTID
Sbjct: 3332 NTPVFSQDTYTAVISEDAVLEQSVITVMADDADGPS-NNHIHYTITDGNQGNPFTID--- 3387
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P++ + I V KLLDRE GY LT++A D G+PPR
Sbjct: 3388 --------PSRGE---------IKVTKLLDREKIS-GYTLTVQASDNGSPPR 3421
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 55/116 (47%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P FS F + VKE+ PIG+ V+T+ A D D G + +I YS+R G G+G F ID E
Sbjct: 1030 LHPPRFSVFADKGFVKEDAPIGSSVMTVSAYDED-EGRDGEIRYSIRDGSGMGVFRIDEE 1088
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE Y LT+ A D+G P ++
Sbjct: 1089 KGI--------------------IETADHLDRETTS-HYWLTVYATDQGVVPLSSF 1123
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 18/92 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ +Y+ TV E+ P G ++ L DAD +N ++SY + GGD LG F ++N
Sbjct: 2915 NPPRFTAEIYKGTVSEDDPPGGIIAILSTTDADTKEVNRQVSYYITGGDLLGQFAVEN-- 2972
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
+ E+ + V K LDRE
Sbjct: 2973 ----------------IQNEWKVYVKKPLDRE 2988
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 53/113 (46%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A+ EN PIGT V+ + A D D G N ++YS+ + L +
Sbjct: 460 NPPEFTQTAYKASFDENVPIGTSVMRVSAKDPD-EGENGYVTYSIANLNPLPFV------ 512
Query: 62 PLNHFR-IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+NHF I+ T D LD E+ P YNL +RA D G P R
Sbjct: 513 -INHFSGIISTSED---------------LDYELMPRVYNLRIRASDWGVPYR 549
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 10 VYQATVKENQPIGTLV-ITLKAADADPPGMNSKISYSVRGGDG-LGYFTIDNEGPLNHFR 67
VY E P+ T V +T +D DP + + +G +G + I PL FR
Sbjct: 246 VYVEQANEYAPVITAVTLTPSESDKDPTYAIVTVEDNDQGSNGEIASLNIVAGDPLQQFR 305
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
V + PG KEY I + +D E P GYNLTL+A DKG PP+
Sbjct: 306 TVRSV--PG--GKEYRIKAVGHIDWESQPSGYNLTLQAKDKGNPPQ 347
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 53/112 (47%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y TV EN TL+ ++A DAD GMN KI YS+ G F+ID
Sbjct: 3122 NAPEFTVDPYSITVFENTEPKTLLTRVQATDAD-AGMNRKIHYSLVNS-AEGQFSIDEFS 3179
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I + K LDRE+ + Y LTLRA D+G P R
Sbjct: 3180 GI--------------------IRLEKPLDRELQAV-YTLTLRATDEGLPRR 3210
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 23/118 (19%)
Query: 1 MNAPVF-SDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
M+ P F S V+E+QP+G+ +I + A D D G N K+ Y + GG+ F +D
Sbjct: 712 MHTPQFRSTLPSSIEVREDQPVGSSIILMNATDLD-TGFNGKLVYVISGGNEDSSFIVDM 770
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
E + + +L LDRE+ YNL + D G P + +
Sbjct: 771 ESGM--------------------LKILSPLDREVKD-KYNLNVTVYDLGIPQKSAWH 807
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y A+V E+ +GT V+ + AA D N++I+YS+ G+ G F+ID+
Sbjct: 3227 NPPVFEYREYSASVSEDTVVGTEVLQIHAASRDIEA-NAEITYSIVSGNEHGKFSIDSTT 3285
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I ++ LD E + Y LT+ A D GTP
Sbjct: 3286 GA--------------------IFIIDSLDYE-SSHEYYLTVEATDGGTP 3314
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ +G+ V+ + A D D G N++I YS+ G+ F ID
Sbjct: 1559 HAPWFTSSSYEGRVYESAAVGSAVLQVTALDKD-KGKNAEIVYSIESGNIGNSFMID--- 1614
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+ + ++D +++ YNL ++A DKG PP
Sbjct: 1615 PILGMIKIAKELDHSNQEE------------------YNLMVKATDKGDPP 1647
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 49/113 (43%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD--GLGYFTIDN 59
NAPVF++ Y T+ E IGT V+ + A DAD G N ISY + D YF ID+
Sbjct: 2280 NAPVFTEQSYAVTLSEASVIGTPVVQVSATDAD-SGTNRGISYHLVEDDTESHDYFHIDS 2338
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L I+ + LD E + L +RAVD G P
Sbjct: 2339 STGL--------------------ILTTRALDYEKIQ-QHKLLIRAVDGGMLP 2370
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y ++E+ P GT++ L+A D D G +S++ YS+ G G F +D
Sbjct: 924 NPPKFIPSNYHVKIREDLPEGTIITWLEAYDPD-VGQSSQVRYSLLDS-GDGTFDVD--- 978
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I +++ LD E L YNLT+RA DKG P
Sbjct: 979 -----------------KLSGAIRIVQRLDYEKKQL-YNLTVRAKDKGKP 1010
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PV Y+A + EN P GT VI +K D D G+N +++YS +D
Sbjct: 2806 NKPVLESNPYEAFIVENMPAGTRVIQVKGTDLD-SGLNGQVTYS-----------LDPSQ 2853
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
L+ ++ G I LK LD E+ Y +T+ A D+G
Sbjct: 2854 ELDIIESFAINMETGW------ITTLKELDHEMRD-KYKITVVAADRG 2894
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P+F+ VY+A + E P G V ++A+DAD + K+ YS+ G+ F I+++
Sbjct: 2387 NPPLFNQLVYEAKISELAPRGHFVTCVQASDADRSDAD-KLEYSILTGNDQKNFIINSK 2444
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
M++PVFS Y+ + EN P+ TLV ++A D D G I+Y + F I
Sbjct: 2488 MHSPVFSQNEYEVELAENAPLHTLVTVVRARDED-SGTYGHITYHIINDFAKDRFYISER 2546
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
G + K+D T+ ++ ++ + L+ ++
Sbjct: 2547 GQI----FTSEKLDRETQAEK--VIAISLMAKD 2573
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F + Y A VK + +G ++ + A D D G N ++ Y ++ + +F ID G
Sbjct: 2078 NAPSFVNLPYYAAVKVDSEVGYVIRRVTAVDKD-AGRNGEVHYYLK--EHHEHFQIDPSG 2134
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVL 87
++ + K +P T KEY + V+
Sbjct: 2135 EIS----LKKKFEPDTVNKEYLVTVV 2156
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y ++EN+P+G V+ L D D +++ G+ F ++++G
Sbjct: 3437 NPPVFSKGNYSIIIQENKPVGFSVLQLVVTDKDSSHNGPPFLFTILSGNEENTFQVNHQG 3496
Query: 62 PL 63
L
Sbjct: 3497 VL 3498
Score = 35.0 bits (79), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP ++ VY V EN P VI ++A D D + K++Y + G+ G+F+I+
Sbjct: 1136 NAPQTTEPVYYPEVMENSPKDVSVIQIEAFDPDSSS-SEKLTYKITSGNPQGFFSIN 1191
>gi|426350687|ref|XP_004042901.1| PREDICTED: protocadherin Fat 2 [Gorilla gorilla gorilla]
Length = 4349
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/109 (37%), Positives = 54/109 (49%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y V EN +G +++T+ A D D P +NS I+YS+ GG+ LG+FTI
Sbjct: 3319 PQFPQDPYSTRVLENVLVGDVILTVSATDEDGP-LNSDITYSLIGGNQLGHFTI------ 3371
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+ + V K LDRE A Y+L LRA D G PP
Sbjct: 3372 --------------HPKKGELQVAKALDREQAS-SYSLKLRATDSGQPP 3405
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ FV+Q V+EN P GT VI + A D D G++ ++ Y +R G GL F+I+ +
Sbjct: 1027 LHPPHFASFVHQGQVQENSPSGTQVIVVAAQD-DDSGLDGELQYFLRAGTGLAAFSINQD 1085
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I L LDRE A Y LT+ AVD+G+ P
Sbjct: 1086 TGM--------------------IQTLAPLDREFASY-YWLTVLAVDRGSVP 1116
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 32/60 (53%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y+ +V EN G LV TLK DAD N +++ + GD LG F I G
Sbjct: 2902 NAPRFASEEYRGSVVENSEPGELVATLKTLDADISEQNRQVTCYITEGDALGQFGISQVG 2961
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP+F+ Y T+ EN P GT V+ + A D D G N ++YS+ G L
Sbjct: 454 HAPLFNRSSYDGTLDENIPPGTSVLAVTATDRD-HGENGYVTYSIAGPKAL--------- 503
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P IDP I K +D E+ Y +RA D G+P R
Sbjct: 504 --------PFSIDPYLGI----ISTSKPMDYELMKRIYTFRVRASDWGSPFR 543
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P FS VY ++ E P T VI L A+D D G N +SY + G D +F I+
Sbjct: 2268 NPPTFSQLVYTTSISEGLPAQTPVIQLLASDQD-SGRNRDVSYQIVEDGSDVSKFFQING 2326
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ ++ LD E A +++ +RA+DKG PP
Sbjct: 2327 STG--------------------EMSTVQELDYE-AQQHFHVKVRAMDKGDPP 2358
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 44/111 (39%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y TV+EN PIG+ V+ L +D D P S+ + G+ F + +G
Sbjct: 3422 NPPRFFQLNYSTTVQENSPIGSKVLQLILSDPDSPENGPPYSFRITKGNNGSAFRVTPDG 3481
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L V + L R A Y L ++A D G PP
Sbjct: 3482 WL---------------------VTAEGLSRR-AQEWYQLQIQASDSGIPP 3510
Score = 39.3 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLG---YFTID 58
N PVF Y+A + EN P+GT VI + A D D G + ++SY + G F ID
Sbjct: 2793 NRPVFEADPYKAVLTENMPVGTSVIQVTAIDKD-TGRDGQVSYRLSADPGSNVHELFAID 2851
Query: 59 NE 60
+E
Sbjct: 2852 SE 2853
Score = 38.9 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N P S V+ +++E+ P+GT V+ L A D D K+++++ G+ +G+F I
Sbjct: 1133 NPPQMSQAVFYPSIQEDAPVGTSVLQLDAWDPDSSS-KGKLTFNITSGNHMGFFMI 1187
Score = 38.5 bits (88), Expect = 0.84, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++ P F+ Y+A+V + GT ++ ++A DAD G N+++ YS+ G+ G+F I+
Sbjct: 1550 LHPPRFTQLHYEASVADTIAPGTELLQVRAMDAD-RGFNAEVHYSLLKGNSEGFFNIN 1606
>gi|109079410|ref|XP_001110265.1| PREDICTED: protocadherin Fat 2-like [Macaca mulatta]
Length = 4349
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ FVYQ V+EN P GT V+ + A D D G++ ++ Y +R G GL F+I+ +
Sbjct: 1027 LHPPHFASFVYQGQVQENSPSGTQVMVVAAQD-DDSGLDGELQYFLRAGTGLAAFSINQD 1085
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I L LDRE A Y LT+ AVD+G+ P
Sbjct: 1086 TGM--------------------IQTLAPLDREFASY-YWLTVLAVDRGSVP 1116
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 40/109 (36%), Positives = 53/109 (48%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y V EN +G +++T+ A D D P +NS I+YS+ GG+ LG+FTI
Sbjct: 3319 PQFPQDPYSTRVLENALVGDVILTVSATDEDGP-LNSDITYSLVGGNQLGHFTI------ 3371
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+ + V K LD E A Y+L LRA D G PP
Sbjct: 3372 --------------HPKKGELQVAKALDWEQAS-SYSLKLRATDSGQPP 3405
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 33/60 (55%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y+ +V EN G LV+TLK DAD N +++ + GD LG F I G
Sbjct: 2902 NAPRFASEEYRGSVVENSEPGKLVVTLKTLDADISEQNRQVTCYITEGDPLGQFGISQVG 2961
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++ P F+ Y+A+V + GT ++ ++A DAD G+N+++ YS+ G+G G+F I+
Sbjct: 1550 LHPPCFTQLHYEASVPDTIVPGTELLQVRATDAD-RGVNAEVHYSLLKGNGEGFFNIN 1606
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNE 60
N P F Y TV+EN PIG+ V+ L +D D P S+ + +G DG
Sbjct: 3422 NPPRFFQLNYSTTVQENSPIGSKVLQLILSDPDSPENGPPYSFQITKGNDG--------- 3472
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ FR+ P +V + L R A Y L ++A D G PP
Sbjct: 3473 ---SAFRVTPDGW----------LVTAEGLSRR-AQEWYQLQIQASDSGIPP 3510
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P FS VY ++ E P T VI L A+D D G N +SY + G D +F I+
Sbjct: 2268 NPPTFSQLVYTTSISEGLPAQTPVIQLLASDRD-SGQNRDVSYQIVEDGSDVSKFFQING 2326
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ ++ LD E A +++ +RA+DKG PP
Sbjct: 2327 STG--------------------EMSTVQELDYE-AQQHFHVKVRAMDKGDPP 2358
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 47/112 (41%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP+F+ Y T+ EN P GT V+ + A D D G N ++YS+ G L
Sbjct: 454 HAPIFNRSSYDGTLDENIPPGTSVLAVTATDRD-HGENGYVTYSIAGPKAL--------- 503
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P IDP I K D E+ Y +RA D G+P R
Sbjct: 504 --------PFSIDPYLGI----ISTSKPTDYELMKRIYTFRVRASDWGSPFR 543
Score = 39.3 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLG---YFTID 58
N PVF Y+A + EN P+GT VI + A D D G + ++SY + G F ID
Sbjct: 2793 NRPVFEADPYKAVLTENMPVGTSVIQVTAIDKD-TGRDGQVSYRLSADPGSNVHELFAID 2851
Query: 59 NE 60
+E
Sbjct: 2852 SE 2853
Score = 38.9 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N P S V+ +++E+ P+GT V+ L A D D K+++++ G+ +G+F I
Sbjct: 1133 NPPQMSQAVFYPSIQEDAPVGTSVLQLDAWDPDSSS-KGKLTFNITSGNHMGFFII 1187
>gi|345548553|gb|AEO12553.1| Lefftyrin, partial [Oscarella carmela]
Length = 14757
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 54/105 (51%), Gaps = 22/105 (20%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP+F++ Y A++ EN +G LV T++A DAD G N +SYS+R G+ G FT+D+
Sbjct: 6198 APLFTEASYLASIAENASVGDLVFTVRANDAD-EGTNGLVSYSIRSGNRDGQFTVDHSNG 6256
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
I VLK LDRE A Y LT+ A D
Sbjct: 6257 --------------------QIAVLKPLDRE-AVNSYVLTILASD 6280
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 57/118 (48%), Gaps = 25/118 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F Y+ + EN IG +++A DAD G+NS I YS+ D FTID+
Sbjct: 8460 NAPIFDQMFYRWEILENVTIGKAGFSVQATDAD-SGINSLIRYSLT--DASSTFTIDH-- 8514
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ ++ LK LDRE YNLT+ AVD G+ PR T AT
Sbjct: 8515 ------------------RFGDLSTLKTLDRETQA-SYNLTVLAVDSGS-PRLTGTAT 8552
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 56/115 (48%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLV-ITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P FS +Y A V E+ +G+ V +T+ A DAD G N ++ YS+ GG+ G F +D+
Sbjct: 1517 NTPRFSRSLYAAGVSESVAVGSTVPVTVSATDADA-GANGQLIYSIVGGNINGAFNLDS- 1574
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
++ V K LDRE Y LT++A D GT PR +
Sbjct: 1575 -------------------ATASLTVAKSLDRETLS-SYRLTIQASDGGTSPRSS 1609
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 48/111 (43%), Gaps = 23/111 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y VKEN IG+ + TL A D D G N + Y + GD G F + + G
Sbjct: 3722 NFPEFARLAYSEAVKENISIGSTITTLSAEDLD-AGSNGDVHYVLGSGDEDGVFKLSDAG 3780
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L V +K LD E + Y LT+ AVD G PP
Sbjct: 3781 SL---------------------VTVKSLDHE-TKISYQLTVFAVDGGRPP 3809
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 51/106 (48%), Gaps = 22/106 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F VY ATV E+ +GT V+ +KA D D G+N+ +SYS G+ F I++
Sbjct: 995 NAPLFQKAVYTATVSESFSVGTSVVQVKATDLD-TGLNALVSYSFVNGNVGQAFGINSSN 1053
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
L + V LD E P Y+LT+ AVD
Sbjct: 1054 GL--------------------VTVAASLDFETRP-AYSLTIEAVD 1078
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y + V EN G +V + A+DAD G N+K+++ + GD F+I +
Sbjct: 3617 NSPVFNQSAYISAVSENALPGRIVTIVAASDAD-SGSNAKLTFRIIDGDRNDVFSIGSTS 3675
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
IV K D LDREI GY+LT+ A D+G+P
Sbjct: 3676 G-----IVSVKGD---------------LDREIIE-GYSLTVEARDQGSP 3704
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 48/110 (43%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ A V EN GT+V TLKA D D G N ISYS+ G+ G F D G
Sbjct: 1204 NAPVFNTTTVFADVPENVATGTVVETLKATDRD-SGSNGDISYSIVSGNSEGKFVADKTG 1262
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
N++V+ LD E Y L + A D G P
Sbjct: 1263 ---------------------NVIVVASLDFE-KIREYRLGVEARDGGNP 1290
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 23/111 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKI-SYSVRGGDGLGYFTIDNE 60
++P+FSDF+Y+ V E+ +G+ V ++A D + G+N+ I SY G+ +F++ +
Sbjct: 4239 HSPIFSDFLYKFLVSEDASVGSSVGRVEAIDTNDVGVNAAIKSYRFTSGNSRNHFSVSSS 4298
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
G I V + LD E + +NLT+ A D G P
Sbjct: 4299 GI---------------------IEVARQLDHENVSV-FNLTIEADDSGLP 4327
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N PVF+ +Y A+ E+ +G ++T+ A D D G+N+KI Y++ GD G F ++NE
Sbjct: 8354 NIPVFNQTIYNASASEDAGLGNSIVTVSATDGD-RGVNAKILYAITSGDQ-GSFDVNNE 8410
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 55/125 (44%), Gaps = 27/125 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P Y+A+V EN P GT V+T+KA D D G N ++YS+ L F IDN
Sbjct: 1414 NTPQLEKANYEASVVENSPTGTSVLTVKATD-DDIGSNGAVTYSLSPSSSL--FNIDNTS 1470
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ + V LDRE + Y+L + AVD G P R AT R
Sbjct: 1471 GV--------------------LEVTGSLDREKQSV-YSLNVIAVDGGDPSR---TATAR 1506
Query: 122 NGLTC 126
+T
Sbjct: 1507 ATVTV 1511
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 16/94 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYF------ 55
NAP F+ V+ V+EN +G+ V+ L A D D G+N+ +++S+ GD G F
Sbjct: 8563 NAPTFTQSVFVGRVEENATLGSSVLLLSATDRD-TGLNADVTFSILSGDEDGAFRLSDVT 8621
Query: 56 --------TIDNEGPLNH-FRIVPTKIDPGTKKK 80
++D E H F + I PG ++
Sbjct: 8622 SGLLVVNGSLDRESRKRHVFEVQVANIHPGVQQS 8655
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP F+ Y A++ EN +G V++++A D D G N + Y + G+ G F+ID
Sbjct: 4029 NAPEFTRRTYSASILENSTVGQFVLSVQAEDVD-SGANGLVRYELSSGNVGGTFSID 4084
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADP-PGMNSKISYSVRGGDGLGYFTIDNEG 61
P+F Y ATV E+ +G +V T++A+ +D PG + I Y + GD FT+D G
Sbjct: 4450 PIFEITSYTATVSEDADVGDVVATIQASSSDEDPGKTNGIVYGIVSGDDESTFTVDGSG 4508
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 55/124 (44%), Gaps = 24/124 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN-E 60
NAPVF+ + + EN +GTLV + A D D G+N ++Y + GD G F ID+
Sbjct: 6303 NAPVFATKSQRVDLFENVTVGTLVALVNATDRD-LGLNGVVAYMIETGDPDGRFLIDSVT 6361
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
G L V + LDRE + Y L + A D+G P ++ +
Sbjct: 6362 GAL---------------------TVAQTLDRE-SKAEYQLEVLAEDQGIPSLQSTASIT 6399
Query: 121 RNGL 124
N L
Sbjct: 6400 VNVL 6403
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
P+FS V+ +V EN IGT V + A+D D G+N+ +SYS+ G+ F I++
Sbjct: 1310 PLFSSSVFTTSVDENVAIGTSVFAVVASD-DDSGLNAIVSYSIVAGNSDFAFVINS 1364
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
+APVFS Y+ ++ E +GT ++ + A+DAD G + ++SYS+ G+ G F +D
Sbjct: 4345 HAPVFSQPEYEVSIYETAGLGTSIVRVSASDAD-DGSSGRVSYSLVEGNENGTFAVD 4400
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N PVF YQ + E +G++V ++ A+DAD G N ++YS+ G+ L F I
Sbjct: 6620 NPPVFDRSSYQTRITEGTDVGSIVASVSASDAD-SGSNGIVTYSIVSGNKLNVFEI 6674
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P FS F+Y AT+ E P G V ++A D D G N+ YS+R ++D+
Sbjct: 2645 PTFSQFLYVATISEAAPAGADVQIVEAIDGD-AGSNAVFLYSLR-------VSLDSSA-- 2694
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
FRI + I + + +DRE + Y+ T+ A+D+G P
Sbjct: 2695 --FRI---------NGRSGQIQLNRKVDRESKDV-YDFTVEAIDEGASP 2731
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 27/105 (25%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+PVFS +Y A++ EN+P G ++T+ A+D D + +SY R D + FT+++
Sbjct: 8674 SPVFSSLLYSASILENRPPGQSLVTVSASDKD----DDNVSYRFR--DSVTDFTLNSTSG 8727
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ + + LDRE + YNLT+ A D
Sbjct: 8728 V--------------------VTTARALDRETKAI-YNLTVIATD 8751
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 32/45 (71%), Gaps = 2/45 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F+ Y+A V E+ P+GT+V+T A+D D G+N ++SY+V
Sbjct: 8770 NAPEFAK-SYRANVSESAPVGTVVLTASASDRD-VGINEEVSYAV 8812
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 7/85 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP FS VY+A + E+ +G V+ L A+D D G N +I++S+ GD +G F + G
Sbjct: 1101 HAPSFSANVYRAVLNESAGVGFSVLQLTASDPD-VGTNGQIAFSLVSGD-IGDFNLSAGG 1158
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
L R + + +++ Y++VV
Sbjct: 1159 LLKTARNLDYE-----RRQTYHLVV 1178
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 50/111 (45%), Gaps = 23/111 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
N PVF + V+EN P+ T V T+ A DAD G+N+ ++YS V G +G F +
Sbjct: 4972 NPPVFVGGPFTVKVRENTPVSTSVFTVSAEDAD-SGINADLAYSIVAGAEGGQLFINSSS 5030
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
G L V LDRE P + L+L D+G+P
Sbjct: 5031 GILR--------------------VGGAGLDRESNP-HFVLSLEVRDRGSP 5060
Score = 39.3 bits (90), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
AP+F+ VY +++E+ +G +IT+ AAD D G+N +++Y + G+ F +D
Sbjct: 8144 APLFTQSVYNVSLREDSVVGIRIITVVAADND-TGVNGQLAYRILTGNDNNTFFLD 8198
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 22/117 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF +Y ++ EN +G+ + T+KA D D G N I YS+ G+ F +
Sbjct: 4867 NSPVFETLLYDFSLYENVSVGSTLGTVKATD-DDIGANGDILYSIESGNTRDSFDV---- 4921
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
++ +I + + +D E + Y+L + A D G+P + A
Sbjct: 4922 ----------------GRRNGHITLQRAVDYE-SVTNYSLIISASDGGSPTLSSTAA 4961
Score = 38.5 bits (88), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F + VKE+ + +++ ++KA D+D G+N + Y + GG
Sbjct: 6514 NSPRFETNAFTVDVKESVSLTSVIASVKATDSD-SGLNGDVVYEIVGG------------ 6560
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N +V G + V++ LDRE Y ++A D G+PP
Sbjct: 6561 --NEESVVAVNRSTGA------LTVVRSLDRERTD-QYRFRIKATDLGSPP 6602
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 24/96 (25%)
Query: 17 ENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN-EGPLNHFRIVPTKIDP 75
EN P+G ++ +KA D D G N K+++++ G+ G F++D+ G L+
Sbjct: 8264 ENSPVGPVLAEIKAQDRDS-GKNGKLNFAITSGNNGGIFSLDSLSGQLS----------- 8311
Query: 76 GTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+++ LDRE Y+LT+ D G P
Sbjct: 8312 ----------IVRSLDRETKK-NYDLTVAVSDSGVP 8336
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 21/114 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+NAP F VY +V+E+ +G V+T+ A D D ++ YS+ G + + +
Sbjct: 8968 LNAPTFPVSVYNVSVREDAGMGASVLTVSAFDPDSHDAG-QVFYSLGTGSAVPFTINSST 9026
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
G ++ R P+ I D E PL YN T+ A+D G P +
Sbjct: 9027 GVISVAR--PSDI-----------------DMETNPL-YNFTVVAIDAGIPQKS 9060
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 48/118 (40%), Gaps = 32/118 (27%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y V E GT ++ L A D D G+N ++ Y
Sbjct: 2540 NAPVFSKQRYVGNVSEAASKGTAILGLTATDLD-SGLNGQVRY----------------- 2581
Query: 62 PLNHFRIVP----TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
R+VP ++PGT + LDRE + Y+L + A D G P R +
Sbjct: 2582 -----RLVPPSNDLDVNPGTGV----LSTKGTLDRE-STSQYDLIVEAFDLGVPSRSS 2629
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 22/109 (20%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
APVF++ Y EN ++V + A D D G N+ + YS+ G+ G F+
Sbjct: 5079 APVFTEIQYVFHAPENVSSNSIVGLVSATDNDA-GTNAFVKYSITEGNANGTFS------ 5131
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
++P + E N + LDRE Y+L + A D GTP
Sbjct: 5132 ----------VNPFLGEIETN----RALDRENVA-AYSLKVLATDGGTP 5165
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 22/111 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y +V E+ + + + T A+D D G N +++YS+ G+ G F ID
Sbjct: 2853 PSFGKAFYSVSVNESVAVSSELFTAVASDLDA-GSNGELTYSISSGNAGGQFEID----- 2906
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
N+ V LD E Y T+ A D G P R
Sbjct: 2907 ---------------ATTGNVTVAIPLDYETTKR-YEFTITAKDGGVPQRS 2941
>gi|431916496|gb|ELK16474.1| Protocadherin Fat 3 [Pteropus alecto]
Length = 1266
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 58/121 (47%), Gaps = 17/121 (14%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F ID+E
Sbjct: 1073 LHTPYFPDFAVVGSVKENSRIGTSVLQVTAQDED-SGRDREIQYSIRDGSGLGRFNIDDE 1131
Query: 61 GPLNHFRIV-----PTKIDP----GTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
H + P+ P G I +LDRE Y LT+ A D+G
Sbjct: 1132 SVRPHKPTIGNFDSPSPFAPLPLLGV------ISTADILDRETTG-SYWLTVYATDRGVV 1184
Query: 112 P 112
P
Sbjct: 1185 P 1185
Score = 43.1 bits (100), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F +Y A V E+ P+GT V+T+ A+D D G N I+YS+ + L +
Sbjct: 503 HTPEFQQPLYDAFVNESVPVGTSVLTVSASDKD-KGENGYITYSIASLNLLPF------- 554
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 555 AINQFTGV--------------ISTTEELDFESSPETYRFIVRASDWGSPYRH 593
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 24/110 (21%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFR 67
F VKEN P+G ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 764 FPSDVAVKENLPVGANILKIKAYDAD-SGFNGKVLFTISDGNTDSCFNIDMETGQLK--- 819
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 820 ------------------VLMPMDREHTDL-YLLNITIYDLGNPQKSSWR 850
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 25 VITLKAADADPPGMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYN 83
V+T+ D G N +I S S+ GD L F + EG EY
Sbjct: 319 VVTVDDLD---EGANGEIESVSIVAGDPLDQFFLAKEGKW---------------MNEYK 360
Query: 84 IVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I + +D E P GYNLTL+A DKG+P +
Sbjct: 361 IKERRQVDWESFPYGYNLTLQAKDKGSPQK 390
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F ID
Sbjct: 968 SPAFIPSSYSVKVLEDLPVGTVIAWLETHDPD-LGLGGQVRYSLV-NDYNGRFEID---- 1021
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 1022 ----------------KASGAIRLSKELDYEKQQF-YNLTVRAKDKGRP 1053
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP+ S+ +Y V EN P VI ++A D D N K++Y + G+ +F I+
Sbjct: 1202 NAPLTSEPIYYPAVMENSPKDVSVIQIQAEDPDSSS-NEKLTYRITSGNPQNFFAIN 1257
>gi|395839907|ref|XP_003792813.1| PREDICTED: protocadherin Fat 1 [Otolemur garnettii]
Length = 4588
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 22/113 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF FV + VKE+ P+G+ V+T+ A D D G + +I YS+R G G+G F ID E +
Sbjct: 1032 PVFPSFVEKGIVKEDVPLGSSVMTVSAHDED-TGRDGEIRYSIRDGSGIGVFKIDEETGV 1090
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
I LDRE + Y LT+ A D+G P ++
Sbjct: 1091 --------------------IETCDRLDRE-STSHYWLTVYAADQGVVPLSSF 1122
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 55/112 (49%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y + E+ + VIT+ A DAD P NS I YS+ G+ FTID
Sbjct: 3331 NTPVFSQDTYTTVISEDAILEQSVITVMADDADGPS-NSHIRYSIIDGNQGNPFTID--- 3386
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ K E + V +LLDRE GY LT++A D G+PPR
Sbjct: 3387 ---------------SVKGE--VKVTRLLDRETIS-GYTLTVQASDNGSPPR 3420
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS Y+A+ EN PIGT ++++ A D D G N ++YS+
Sbjct: 459 NPPEFSQTAYKASFDENVPIGTTIMSVSAEDPD-EGENGYVTYSIAN------------- 504
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
LNH VP ID T + + + LD E+ P Y+L +RA D G P R
Sbjct: 505 -LNH---VPFVIDHFTGA----VSISENLDYELMPRVYSLRIRASDWGLPYR 548
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N +++Y + GGD L F I+N
Sbjct: 2916 PRFTAEIYKGTVSEDDPPGGVIAILSTTDADSEEINRQVTYFITGGDALRQFAIEN---- 2971
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE Y LT+ A D
Sbjct: 2972 --------------IQNEWKVYVKKPLDREQKD-NYLLTITATD 3000
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 10 VYQATVKENQPIGTLV-ITLKAADADPPGMNSKISYSVRGGDG-LGYFTIDNEGPLNHFR 67
V+ E P+ T V ++ D DP + RG +G + +I L FR
Sbjct: 246 VHVEQANECAPVITAVTLSPSELDKDPTYAIVTVDDCDRGANGEIASLSIVAGDLLQQFR 305
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
V + PG+K EY + + +D + P GYNLTL+A DKGTPP+
Sbjct: 306 TVRSF--PGSK--EYKVKAIGDIDWDSHPFGYNLTLQAKDKGTPPQ 347
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ +G++V+ + A D D G N+++ YS+ G+ FTID
Sbjct: 1558 HAPWFTSSSYEGRVYESAAVGSVVLQITALDKD-KGENAEVLYSIESGNIGNSFTID--- 1613
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+ +I K LDR + Y+L ++A DKG PP
Sbjct: 1614 PILG-----------------SIKTAKELDRS-NQVEYDLIVKATDKGNPP 1646
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKEN P+G+ VI + A D D G N K+ Y++ GG+ F ID E +
Sbjct: 726 VKENHPMGSSVIFMNATDLD-TGFNGKLVYAISGGNEDSSFIIDMETGM----------- 773
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ V LDRE Y+L + D G P + T+
Sbjct: 774 ---------LKVFSPLDRETKD-RYSLNITVYDLGIPQKATWH 806
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ IGT V+ + AA D N++I+Y + G+ G F+ID+
Sbjct: 3226 NPPVFEYREYGATVSEDILIGTEVLQVYAASRDIEA-NAEITYLIISGNEHGKFSIDS-- 3282
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I +++ LD E + Y LT+ A D GTP
Sbjct: 3283 ------------------KTGAIFIIENLDYE-SSHEYYLTVEATDGGTP 3313
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 20/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y AT+ E IGT V+ ++A D+D N ISY + G +
Sbjct: 2279 NPPVFAHQSYAATLSEASVIGTSVVHVRATDSDSEP-NRGISYHMFGNHSKSH------- 2330
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+HF ID T I +++ LD E + + + +RAVD G PP
Sbjct: 2331 --DHFH-----IDSSTGL----ISLVRTLDFEQSQ-QHKIFVRAVDGGMPP 2369
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P+F +Y+A + E+ G V +KA DAD ++ K+ YS+ G+ F ID+E
Sbjct: 2386 NPPLFDRQIYEAKISEHAAPGQFVTCMKAYDADSSDID-KLEYSILSGNDHKTFVIDSE 2443
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 53/114 (46%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y V EN GT + ++A DAD G+N KISY + G F+I+
Sbjct: 3121 NPPEFTADPYTIAVFENTEPGTPLTRVQATDAD-AGLNQKISYLLMNS-ADGQFSINELS 3178
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I + K LDRE+ + Y LT++AVD+G P R T
Sbjct: 3179 GI--------------------IQLEKPLDRELQAV-YTLTVKAVDQGLPRRLT 3211
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y+ V+E+ P GT+++ L+A D D G +S++ YS+ G G F +D
Sbjct: 923 NPPVFIPPSYRVKVREDLPEGTIIMWLEAHDPD-LGQSSQVRYSLM-DHGEGGFDVD--- 977
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT+R DKG P
Sbjct: 978 -----------------KLSGAVRIVQQLDFEKKQV-YNLTVRVKDKGKP 1009
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 54/114 (47%), Gaps = 10/114 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS Y V+EN+P+G V+ L D D +++ G+ F +D +G
Sbjct: 3436 NAPAFSQENYSLIVQENKPVGFSVLQLVVTDKDSSHNGPPFFFTIVSGNEDKAFEVDQQG 3495
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR---EIAPLGYNLTLRAVDKGTPP 112
L + K+ K++ ++ +K+ D +++ L Y + +R +++ P
Sbjct: 3496 VLLTSGAIKRKV------KDHYLLHVKVADNGKPQLSSLTY-IDIRVIEESIYP 3542
Score = 38.5 bits (88), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 16/128 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTID 58
N+PV Y+A V EN P G+ VI ++A+D D G N +++YS+ + + + FTI+
Sbjct: 2805 NSPVLESNPYEAFVVENLPGGSRVIQIRASDLD-SGTNGQVTYSLDLSQSEEVIESFTIN 2863
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTPPR- 113
E I K K+ Y I V+ E L ++T+ V+ +PPR
Sbjct: 2864 KETGW----ITTLKELDHEKRANYQIKVVASDHGEKVQLSSTAVVDVTITDVND-SPPRF 2918
Query: 114 --ETYKAT 119
E YK T
Sbjct: 2919 TAEIYKGT 2926
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+++PVF Y+ + EN P+ TLVI +KA D D G+ +I+Y + F + +
Sbjct: 2487 LHSPVFVQNEYEVELAENAPLHTLVIEVKATDED-SGIYGQITYHIVNDFAKERFYTNEQ 2545
Query: 61 GPL 63
G +
Sbjct: 2546 GQV 2548
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 21/114 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S+ VY V EN P V+ ++A D D N K+ Y + G+ G+F+I +
Sbjct: 1135 NAPQTSEPVYYPEVMENSPKDVSVVQIEAFDPDSSS-NDKLMYKITSGNPQGFFSIHPK- 1192
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
T + T +K LDRE + L + D G+PP+ T
Sbjct: 1193 ---------TGLITTTSRK---------LDREQQD-EHILEVTVTDNGSPPKST 1227
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV +Y T+ E+ G LV+ + A DAD N++I+Y++ G +
Sbjct: 3019 NSPVCEKTLYSDTIPEDALPGKLVMQISATDADIRS-NAEITYTLFGSGAEKF------- 3070
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
K++P T + + +L LDRE + YNL ++A D G
Sbjct: 3071 ----------KLNPDTGE----LKILTALDREHQAV-YNLLVKATDGG 3103
>gi|350594501|ref|XP_003134187.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2 [Sus scrofa]
Length = 3938
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/109 (37%), Positives = 53/109 (48%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P FS +Y V EN +G LV+T+ A D D P +NS I+YS+ GG+ LG+F I
Sbjct: 3265 PRFSQDLYSTRVSENAIVGDLVLTVSATDEDGP-LNSAITYSLVGGNQLGHFAI------ 3317
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+ + V K LD E Y+L LRA D G PP
Sbjct: 3318 --------------HPKKGELQVAKTLDWEQIS-SYSLRLRATDNGQPP 3351
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ FV+Q V+EN P GT V T+ AA D G++ ++ Y +R G L F+I +
Sbjct: 1026 LHPPRFASFVHQGQVQENSPSGTSV-TVVAAQDDDSGLDGELQYFLRAGTSLSAFSIHQD 1084
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I + LDRE Y LT++AVD+G+ P
Sbjct: 1085 TGM--------------------IQTVAPLDREFMSC-YWLTVQAVDRGSVP 1115
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 50/112 (44%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP+FS Y++T EN P GT V+T+ A D D G N ++YS+ +
Sbjct: 453 HAPMFSKSSYESTFDENIPPGTSVLTITATDKD-HGENGYVTYSITRPNA---------- 501
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
VP IDP I K +D E+ Y +RA D G+P R
Sbjct: 502 -------VPFSIDPYLGI----ISTSKPMDYELMNRIYTFRVRASDWGSPFR 542
Score = 42.0 bits (97), Expect = 0.071, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 39/92 (42%), Gaps = 18/92 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y+ +V EN G V TLK DAD N +++ + GD LG F I G
Sbjct: 2848 NAPRFASEDYRGSVVENSEPGEPVATLKTLDADIAEQNRQVTCYITEGDPLGQFGISQVG 2907
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
E+ I K LDRE
Sbjct: 2908 ------------------DEWRIFARKTLDRE 2921
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P FS VY +V E P T VI L A+D D G N ISY + G D +F I+
Sbjct: 2212 NPPTFSQLVYTTSVSEGLPAQTPVIHLLASDQD-SGQNRDISYHIVEDGSDVSKFFQING 2270
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ ++ LD E A +++ +RA+D+G PP
Sbjct: 2271 STG--------------------EMSTVQELDYE-AQQHFHVKVRAMDRGDPP 2302
Score = 38.5 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P S +Y V E+ P+G ++ + A D D N++I+YS+ G +
Sbjct: 2953 NSPQCSQLLYTGKVSEDVPLGHFILKISATDLD-SDTNAQITYSLHGPGADDF------- 3004
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
K+DP T + ++ L LDRE + Y+L +A D G
Sbjct: 3005 ----------KLDPHTGE----LITLTALDREKKDV-YSLVAKATDGG 3037
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F YQ TV E+ +GT V LKA DAD N ++ Y++
Sbjct: 815 NAPRFPPGGYQVTVSEDTEVGTTVAQLKAKDADSED-NGRVRYTL 858
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 42/111 (37%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y +V+EN P G+ V+ L +D D P S+ + G+ F + +G
Sbjct: 3368 NPPRFFQLNYSTSVQENSPTGSKVLQLILSDPDSPENGPPYSFRITQGNDGSAFQVTPDG 3427
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L V + L + + Y L + D GTPP
Sbjct: 3428 WL---------------------VTTEGLSKRVQEW-YQLQIEVSDSGTPP 3456
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTID 58
N P+F Y+A + EN P+GT VI + A D D G + +SY + G + F ID
Sbjct: 2739 NRPIFEADPYKAVLTENMPVGTSVIQVTANDQD-TGNDGHVSYRLPVDPGSNIHELFAID 2797
Query: 59 NE 60
+E
Sbjct: 2798 SE 2799
Score = 35.4 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P S V+ +V+E+ P+ T V+ L A D D K+++++ G+ +G F I
Sbjct: 1132 NPPQMSRPVFYPSVREDAPLHTSVLQLDARDPDSSS-KGKLTFNITSGNQMGVFAIH--- 1187
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLD 91
PL ++D + K+ +I+ + +LD
Sbjct: 1188 PLTGLLSTARQLD--RENKDEHILEVTVLD 1215
>gi|449500756|ref|XP_004174871.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Taeniopygia
guttata]
Length = 4576
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 59/112 (52%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVFS Y A + E+ + VIT+ A DAD P N+++ Y++ G+ FTID
Sbjct: 3319 NSPVFSQDTYTAVISEDAMLEQSVITVMADDADGPS-NNRVHYTIIDGNQGNPFTID--- 3374
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
PT+ + I V KLLDRE GY LT++A D G+PP+
Sbjct: 3375 --------PTRGE---------IKVTKLLDREKIS-GYTLTVQASDNGSPPK 3408
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P FS F + +KE+ P+G+ V+T+ A D D G + +I YS+R G G+G F ID E
Sbjct: 1024 LHPPQFSIFADKGFIKEDAPVGSSVMTVSAYDED-AGRDGEIRYSIRDGSGIGVFRIDEE 1082
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE Y LT+ A D+G P ++
Sbjct: 1083 KGI--------------------IETADHLDRETTS-HYWLTVYATDQGVVPLSSF 1117
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 53/113 (46%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A+ EN PIGT V+ + A D D G N ++YS+ + L +
Sbjct: 454 NPPEFTQTSYKASFDENVPIGTSVMRVSAKDPD-EGENGYVTYSIANLNPLPFV------ 506
Query: 62 PLNHFR-IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+NHF I+ T D LD E+ P YNL +RA D G P R
Sbjct: 507 -INHFSGIISTSED---------------LDYELMPRVYNLRIRASDWGVPYR 543
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ +Y+ TV E+ P G ++ L DAD N ++ Y + GGD LG F I+N
Sbjct: 2911 NPPRFTAEIYKGTVSEDDPPGGVIAILSTTDADTEETNRQVFYYITGGDPLGQFAIEN-- 2968
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE Y L + A D
Sbjct: 2969 ----------------IQNEWKVYVKKPLDRE-EKDNYLLNITATD 2997
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 10 VYQATVKENQPIGTLV-ITLKAADADPPGMNSKISYSVRGGDG-LGYFTIDNEGPLNHFR 67
V+ E+ P+ T V +T +D+DP I S +G +G + I L F+
Sbjct: 240 VHIEQANEHAPVITAVPLTPSESDSDPTYAIVTIEDSDQGLNGEIASLNIVAGDALQQFK 299
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
V + PG KEY I + +D E P GYNLTL+A DKG+PP+
Sbjct: 300 TVRSV--PG--GKEYRIKAIGPIDWESHPFGYNLTLQAKDKGSPPQ 341
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y A+V E+ +GT V+ + AA D N++I+YS+ G+ G F+ID+
Sbjct: 3214 NPPVFEQREYSASVSEDILVGTEVLQIHAASRDIEA-NAEITYSIVSGNEHGKFSIDSTT 3272
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I +++ LD E + Y LT+ A D GTP
Sbjct: 3273 GA--------------------IFIIESLDYE-SSHEYYLTVEATDGGTP 3301
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 23/117 (19%)
Query: 1 MNAPVF-SDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
++AP F S +KE+QP+G+ +I++ AAD D G N K+ Y + G+ F +D
Sbjct: 706 LHAPQFRSTLPSSIEIKEDQPVGSSIISVNAADLD-TGFNGKLVYVISAGNEDSSFIVDM 764
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
EG + + +L LDRE+ Y L + D G P + +
Sbjct: 765 EGGV--------------------LKILSPLDRELRD-KYTLNITVYDLGIPQKSAW 800
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ +G+ V+ + A D D G N++I YS+ G+ F ID
Sbjct: 1553 HAPWFTSPAYEGRVYESAAVGSAVLQVTALDKD-KGKNAEIVYSIESGNIGNSFLID--- 1608
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+ + ++D +++ YNL ++A DKG PP
Sbjct: 1609 PILGMIKIAKELDRSNQEE------------------YNLMVKATDKGHPP 1641
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 48/113 (42%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N PVF++ Y AT+ E IGT V + A DAD G N ISY + + YF ID+
Sbjct: 2276 NPPVFTEQSYIATLSEASVIGTSVAQVSATDAD-SGTNRGISYHLVEDNSESHDYFHIDS 2334
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L I+ K LD E + L +RAVD G P
Sbjct: 2335 STGL--------------------ILTAKTLDYEQIK-QHKLLIRAVDGGMLP 2366
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y ++E+ P GT++ L+A D D G +S++ YS+ G G F +D
Sbjct: 918 NPPKFIPSNYHVKIREDLPEGTIITWLEAYDPD-LGQSSQVRYSLLDS-GDGTFDVD--- 972
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I +++ LD E L YNLT+RA DKG P
Sbjct: 973 -----------------KISGAIRIVQRLDYEKKQL-YNLTVRAKDKGKP 1004
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
M++PVFS Y+ + EN P+ TLV +KA D D G + I+Y + F +
Sbjct: 2484 MHSPVFSQNEYEVELAENSPLHTLVTEVKATDED-SGTHGHITYHIVNDFAKDRFYTNER 2542
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
G + K+D T+ ++ ++ + L+ ++
Sbjct: 2543 GQI----FTAEKLDRETQAEK--VIAISLMAKD 2569
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 16/103 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG---DGLGYFTID 58
N P+ Y+A + EN P GT VI +K D D G+N +++YS+ D + FTI+
Sbjct: 2802 NQPILESNPYEAFIVENTPAGTRVIQVKGTDLD-SGLNGQVTYSLXSFSELDIIESFTIN 2860
Query: 59 NE-------GPLNH-----FRIVPTKIDPGTKKKEYNIVVLKL 89
E L+H ++I+ D G K + ++ V+++
Sbjct: 2861 METGWITTLKELDHEKRDKYKIIVVASDRGEKIQLSSMAVVEV 2903
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 56/131 (42%), Gaps = 20/131 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP ++ VY V EN P VI ++A D D + K+SY + G+ G+F+I
Sbjct: 1130 NAPQTTEPVYYPEVMENSPKDVSVIQIEAFDPDSSS-SEKLSYKITSGNPQGFFSINPKT 1188
Query: 58 ----------DNEGPLNHFRIVPTKIDPGT-KKKEYNIVVLKLLDREIAP---LGYNLTL 103
D E H V T D GT K V++K+LD L +
Sbjct: 1189 GLITTTSRKLDREQQGEHILEV-TVTDNGTPAKSTIARVIVKVLDENDNKPQFLQKFYKI 1247
Query: 104 RAVDKGTPPRE 114
R ++G P RE
Sbjct: 1248 RLPERGKPERE 1258
Score = 35.0 bits (79), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 45/106 (42%), Gaps = 25/106 (23%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NEGP 62
PVF Y + + EN + + V+ ++A P G K+ YS+ GGD FTI+ N G
Sbjct: 2175 PVFEKPFYSSEIPENIQLHSPVVHVQANS--PEGQGLKVFYSITGGDPFNQFTINFNTGV 2232
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK 108
N V+ LD E P Y L++RA D
Sbjct: 2233 XN---------------------VVAPLDFESHP-AYKLSVRATDS 2256
>gi|260795106|ref|XP_002592547.1| hypothetical protein BRAFLDRAFT_133692 [Branchiostoma floridae]
gi|229277768|gb|EEN48558.1| hypothetical protein BRAFLDRAFT_133692 [Branchiostoma floridae]
Length = 1894
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 57/114 (50%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS VY V EN P+G+ + T++A D D G N +++YS+ GDG+ YF I++
Sbjct: 1360 NKPAFSQPVYTVYVDENIPVGSNITTVEATDPDLNG-NGEVTYSIVSGDGMAYFDINSTT 1418
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
L + T D +DRE L NL ++A D GTP + +
Sbjct: 1419 GL-----ISTSAD---------------VDRETLALN-NLVVQATDSGTPAKSS 1451
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 13/108 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N P+F+ VY +V E +G+ ++ L A DAD G NS + Y++ GD G F + +
Sbjct: 1147 NHPIFTPSVYTTSVLEGAAVGSQLLQLTATDAD-LGNNSVLDYTITAGDTNGTFNLSGDI 1205
Query: 61 ----GPLNH-----FRIVPTKIDPG--TKKKEYNIVVLKLLDREIAPL 97
L+H F + T D G + N+VV L + +P+
Sbjct: 1206 LVLASGLDHSVRSYFSLTVTATDRGVPSLSSTANVVVNVLAENNYSPV 1253
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PV + Y A+V E GT V+ + A+D D N++I+YS+ G+F ID
Sbjct: 1571 NTPVLTQASYTASVSEGVTAGTSVVQVVASD-DDADENAEITYSITSASQPGHFEIDGAS 1629
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ + + LDRE Y LT++A D G P
Sbjct: 1630 GV--------------------VRTAQALDRENID-SYTLTVQATDNGVPS 1659
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 50/118 (42%), Gaps = 22/118 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y +V EN +GTLV ++A D D N+ +++++ GD F ID+
Sbjct: 1465 NTPSFVPLEYVVSVLENAAVGTLVTPVQALDPDES-TNALLTFAILEGDDNNEFAIDSS- 1522
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
GT + LDRE + Y LT+ A D GTP T T
Sbjct: 1523 -------------TGTIRTA------STLDRE-SIESYTLTITATDGGTPTNLTGSGT 1560
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 25/119 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F V TV E+ IG + L D+D G+N +++Y + G+ +G F++ ++G
Sbjct: 190 NNPMFDPSVIYTTVSESTGIGASIAQLNCTDSD-DGVNQELTYVISAGNDVGLFSVSSDG 248
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKL-LDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+V L LD E + + LT+ A D GT P+ + AT
Sbjct: 249 ----------------------LVSLAYGLDYETST-AHALTVVATDGGTSPQLSGTAT 284
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 44/111 (39%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V +V E+ P GT ++ L DAD N +IS+ + G+ G F +D
Sbjct: 613 NPPTFDSLVMYTSVLESAPEGTSLLQLNCTDADADA-NGEISFVISAGNDEGKFAVDRT- 670
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
GT + N DRE P Y L L A D G P
Sbjct: 671 -------------SGTLRTVGN------FDRENNP-DYTLVLLATDWGQNP 701
>gi|307190371|gb|EFN74430.1| Cadherin-related tumor suppressor [Camponotus floridanus]
Length = 3233
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 57/113 (50%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQ--PIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D Y V EN P G VI +KA DAD P N +++Y ++
Sbjct: 478 NAPVFLDSPYLVHVMENMVPPDGGFVIQVKAYDADTPPYNDQVTYFLK------------ 525
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
EG + FRI + D I +L+ LDRE+ P Y LTL A+D G+PP
Sbjct: 526 EGDTDLFRINASTGD---------ISLLRSLDRELMP-EYTLTLVAMDTGSPP 568
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 55/110 (50%), Gaps = 21/110 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y A+V E GT V+T++A D D N++ SYS+ GG
Sbjct: 1640 PEFQQGFYDASVSEGAVHGTRVVTVRAVDKDIKPQNNQFSYSIIGG-------------- 1685
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
NH + K+DP T +I K LDRE P Y+LT+ A+D G+PP+
Sbjct: 1686 NHGQAF--KVDPQTG----DIETAKQLDRETMP-AYDLTIGAIDTGSPPQ 1728
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 51/118 (43%), Gaps = 23/118 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+ + A + EN IGT V+T+ A D D G N +I Y++ GGD G F + G
Sbjct: 160 NAPIVETGPHAADIVENATIGTPVLTVTAQDLD-SGDNGRILYAITGGDEDGNFGVAPNG 218
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
L +LLDRE PL YNL L D PP +T
Sbjct: 219 TL---------------------FTRRLLDRERKPL-YNLALSVTDSPLPPARPLSST 254
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF Y ATV EN IG V+ + A D D G N ++ YS+ GD FTI +G
Sbjct: 369 NSPVFDPRQYSATVAENASIGASVLQVSAMDRD-EGANGRVRYSIAMGDDNRDFTISEDG 427
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I V K L+ E P Y LT+R+ D ET
Sbjct: 428 GV--------------------IRVAKNLNFERKPC-YYLTIRSEDCAAEAGET 460
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 49/113 (43%), Gaps = 24/113 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ Y+ATV EN P GT V A D D G+N KI Y + G +F + G +
Sbjct: 587 PEFNRQDYKATVMENMPAGTWVTKPHATDQD-EGVNGKIRYRLLGDKAERFFVDPDTGEV 645
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG-TPPRET 115
F VP LDRE + Y+LTL A D T PR +
Sbjct: 646 --FTTVP-------------------LDREQTAV-YHLTLVARDSSPTEPRAS 676
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 43/110 (39%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF V EN+P GT+V+TL A D D P + +Y + GG T+D
Sbjct: 1744 NGPVFDPPEVIGYVSENEPAGTIVMTLSATDPDLPPNGAPFTYKLIGGRQSDVVTLDKHS 1803
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ + K LDRE P +L + D G P
Sbjct: 1804 GM--------------------LRTTKSLDRETMP-QLDLVVEVEDSGVP 1832
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F+ +Y+A + EN P + V + A D D P + + Y + GG G +F I E
Sbjct: 1426 NPPTFNQSIYEAFLPENSPSDSFVYKVVAQDIDSPKY-AVVQYKILGGSGKDHFHIREE 1483
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 36/119 (30%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP F+ +Q V EN+P+ T ++T+ A D D+ GP
Sbjct: 1322 APTFAAVSHQVRVPENEPVNTTILTVSAVD-------------------------DDNGP 1356
Query: 63 LNHFRIVPTKIDPGTKKKEY-------NIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
IV KI G ++ E+ +++LK LD ++ Y L + A D G P++
Sbjct: 1357 NG---IVRYKISAGNERNEFFVHSITGAVIILKPLDYDLVQ-EYQLNITATDLGFEPKQ 1411
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAP F Y + EN P G+ V + A DAD G NS++SY
Sbjct: 54 NAPTFQSTAYSFDIPENVPRGSRVGQVVATDADAEGPNSQLSY 96
>gi|432098834|gb|ELK28329.1| Protocadherin Fat 2 [Myotis davidii]
Length = 4335
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F FV+Q V+EN P GT VI + A D D G++ ++ Y +R G L F+I+ +
Sbjct: 1026 LHPPRFDSFVHQGQVQENSPPGTQVIVVTAHD-DDSGLDGELQYFLRDGTSLTAFSINQD 1084
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I L LDRE P Y LT+ AVD+G+ P
Sbjct: 1085 TGM--------------------IQTLATLDREFVPC-YWLTVLAVDRGSVP 1115
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 52/109 (47%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F +Y V EN +G V+T+ A D D P +NS I+YS+ GG+ LG+F ID
Sbjct: 3320 PRFPQDLYSTRVLENAIVGDTVLTVSATDEDGP-LNSAITYSLVGGNQLGHFAID----- 3373
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+ + V K LD E Y+L LRA D G PP
Sbjct: 3374 ---------------PKKGELQVAKALDWEQTS-SYSLRLRATDSGRPP 3406
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 40/92 (43%), Gaps = 18/92 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y+ +V EN G V TLK DAD N +++ + GD LG F I G
Sbjct: 2903 NAPKFASEDYRGSVIENSEPGEPVATLKTFDADISEQNRQVTCYITEGDPLGQFGISQVG 2962
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
E++I K LDRE
Sbjct: 2963 ------------------DEWSIFSRKTLDRE 2976
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 49/114 (42%), Gaps = 24/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNE 60
+APVF Y T EN P G+ V+T+ A D D G N ++YS+ R D
Sbjct: 453 HAPVFHRLSYAGTFDENIPPGSSVLTVTATDRD-HGENGYVTYSIARPKD---------- 501
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
VP IDP I K +D E+ Y +RA D G+P R+
Sbjct: 502 --------VPFSIDPYLGI----ISTTKPMDYELMKRIYTFQIRASDWGSPFRQ 543
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P FS VY ++ E P T VI L A+D D G N +SY + G D +F I+
Sbjct: 2267 NPPTFSQLVYTTSISEGLPAQTPVIQLLASDQDS-GQNRDVSYQIVEDGSDVSKFFQIN- 2324
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G+ + + ++ LD E + +++ +RA+D+G PP
Sbjct: 2325 ----------------GSTGE---MSTVQELDYE-SQQHFHVKVRAMDRGNPP 2357
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y +V+EN PIG+ V+ L +D D P S+ + G+ F + +G
Sbjct: 3423 NPPRFFQLNYSTSVQENCPIGSKVLQLILSDPDSPENGPPYSFQITKGNDGSAFRVTPDG 3482
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLR 104
L + ++ +E+ + +++ D I PL + ++R
Sbjct: 3483 WLMTTTYLSRRV------QEWYQLQIEVSDSGIPPLSSSTSVR 3519
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P S V+ +V+E+ P+ T V+ L A D D K+++++ G+ +G+F I
Sbjct: 1132 NPPRMSRPVFYPSVQEDAPLHTSVLQLDAWDPDSSS-KGKLTFNITSGNHMGFFAIH--- 1187
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLD 91
PL ++D TK + +I+ + +LD
Sbjct: 1188 PLTGLLSTARQLDRETKDE--HILEVTVLD 1215
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
P F+ Y+A+V + GT ++ ++A D D G N+++ YS+ G+ G+F I+
Sbjct: 1552 PRFTQLHYEASVPDTTVPGTELLQVRAMDGD-RGANAEVHYSLLKGNSEGFFNIN 1605
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
N P+F Y+A + EN P+GT VI + A D D G + ++SY
Sbjct: 2794 NRPIFEADPYKAILTENMPVGTAVIQVTANDQD-TGKDGQVSY 2835
>gi|397517685|ref|XP_003829037.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2 [Pan paniscus]
Length = 4349
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/109 (37%), Positives = 54/109 (49%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y V EN +G +++T+ A D D P +NS I+YS+ GG+ LG+FTI
Sbjct: 3319 PHFPQDPYSTRVLENVLVGDVILTVSATDEDGP-LNSDITYSLIGGNQLGHFTI------ 3371
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+ + V K LDRE A Y+L LRA D G PP
Sbjct: 3372 --------------HPKKGELQVAKALDREQAS-SYSLKLRATDSGQPP 3405
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ FV+Q V+EN P GT VI + A D D G++ ++ Y +R G GL F+I+ +
Sbjct: 1027 LHPPHFASFVHQGQVQENSPSGTQVIVVAAQD-DDSGLDGELQYFLRAGTGLAAFSINQD 1085
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I L LDRE A Y LT+ AVD+G+ P
Sbjct: 1086 TGM--------------------IQTLAPLDREFASY-YWLTVLAVDRGSVP 1116
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 32/60 (53%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y+ +V EN G LV TLK DAD N +++ + GD LG F I G
Sbjct: 2902 NAPRFASEEYRGSVVENSEPGELVATLKTLDADISEQNRQVTCYITEGDPLGQFGISQVG 2961
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP+F+ Y T+ EN P GT V+ + A D D G N ++YS+ G L
Sbjct: 454 HAPLFNRSSYDGTLDENIPPGTSVLAVTATDRD-HGENGYVTYSIAGPKAL--------- 503
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P IDP I K +D E+ Y +RA D G+P R
Sbjct: 504 --------PFSIDPYLGI----ISTSKPMDYELMKRIYTFRVRASDWGSPFR 543
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P FS VY ++ E P T VI L A+D D G N +SY + G D +F I+
Sbjct: 2268 NPPTFSQLVYTTSISEGLPAQTPVIQLLASDQD-SGRNRDVSYQIVEDGSDVSKFFQING 2326
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ ++ LD E A +++ +RA+DKG PP
Sbjct: 2327 STG--------------------EMSTVQELDYE-AQQHFHVKVRAMDKGDPP 2358
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++ P F+ Y+A+V + GT ++ ++A DAD G+N+++ YS+ G+ G+F ID
Sbjct: 1550 LHPPRFTQLHYEASVADTIAPGTELLQVRAMDAD-RGVNAEVHYSLLKGNSEGFFNID 1606
Score = 39.3 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLG---YFTID 58
N PVF Y+A + EN P+GT VI + A D D G + ++SY + G F ID
Sbjct: 2793 NRPVFEADPYKAVLTENMPVGTSVIQVTAIDKD-TGRDGQVSYRLSADPGSNVHELFAID 2851
Query: 59 NE 60
+E
Sbjct: 2852 SE 2853
Score = 38.9 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P S V+ ++E+ P+GT V+ L A D D K+++++ G+ +G+F I
Sbjct: 1133 NPPQMSQAVFYPCIQEDAPVGTSVLQLDAWDPDSSS-KGKLTFNITSGNHMGFFMIH--- 1188
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLD 91
P+ ++D + KE +I+ + +LD
Sbjct: 1189 PVTGLLSTAQQLD--RENKEEHILEVTVLD 1216
Score = 38.5 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 43/111 (38%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y TV+EN PIG+ V+ L +D D P + + G+ F + +G
Sbjct: 3422 NPPRFFQLNYSTTVQENSPIGSKVLQLILSDPDSPENGPPYXFRITKGNNGSAFRVTPDG 3481
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L V + L R A Y L ++A D G PP
Sbjct: 3482 WL---------------------VTAEGLSRR-AQEWYQLQIQASDSGIPP 3510
>gi|47216307|emb|CAF96603.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1088
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 56/118 (47%), Gaps = 22/118 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQAT+ EN P GT V+T+ A D D RG +G ++I N
Sbjct: 458 NAPEFQQTSYQATIDENAPAGTSVVTVTATDRD------------RGENGYVTYSITNMS 505
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
P P ID T I ++LD E+ P YNL +RA D G+P R +A+
Sbjct: 506 PQ------PFVIDYFTGV----ITTSEVLDYELMPRIYNLKVRASDWGSPFRREVEAS 553
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
P+F FV + +KE+ +GT V+T+ A D D G + ++ YS+R G GLG FTID E
Sbjct: 1031 PLFRSFVEKGFIKEDALVGTPVMTITAEDEDK-GQDGEVRYSIRDGSGLGIFTIDEE 1086
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 12/102 (11%)
Query: 17 ENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG-----LGYFTIDNEGPLNHFRIVPT 71
E+ P+ + V TL +DADP + + +V GD + +I PL F+ V
Sbjct: 251 EHAPVISAV-TLVPSDADPDP--TYVIVTVEDGDHGPNGEIASLSIVAGDPLQQFKAV-- 305
Query: 72 KIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ PG+K EY I +K +D + P GYNLTL+A DKG+PP+
Sbjct: 306 RSSPGSK--EYRIKAVKDVDWDSQPFGYNLTLQAKDKGSPPQ 345
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 23/116 (19%)
Query: 3 APVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
AP F++ F VKE+ P+G ++ L A D+D G N K+ Y + GG+ +F +D E
Sbjct: 712 APQFAEAFPNVIEVKEDLPVGARIVHLSATDSD-SGFNGKLVYVISGGNTGSHFVVDMET 770
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ V LDRE A Y L + D G P + + +
Sbjct: 771 GW--------------------LQVYSPLDRETAD-SYTLNVTVYDLGIPQKSSSR 805
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 25/111 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN-E 60
N P F Y+ V+E+ P+GT+++ L+A D D G +S++ YS+ +G G+F +D
Sbjct: 922 NPPKFVPPNYRVKVREDLPVGTVIMWLEAHDPD-VGPSSQVRYSLM-DNGDGHFEVDKLS 979
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
G L RIV L+ E + +NLT RA DKG P
Sbjct: 980 GAL---RIVQN------------------LNYETKQV-FNLTARAKDKGKP 1008
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 47/108 (43%), Gaps = 24/108 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F Y + E P+GT +I + ++D D G N + YS+ G G F ID
Sbjct: 817 NSPQFLQESYSVQISEGTPVGTEIIQVDSSDKD-QGKNGIVKYSILG--GTDDFAIDE-- 871
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
D G + V K LDRE+ P+ Y L + A D+
Sbjct: 872 ------------DTGV------VSVTKPLDRELHPV-YVLKIAARDQA 900
>gi|357610242|gb|EHJ66890.1| hypothetical protein KGM_21712 [Danaus plexippus]
Length = 4656
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 5/59 (8%)
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
P HFR+ + ++ EY+++ LLDR+ APLGYNLTL+A D G PPR +Y P
Sbjct: 358 PDGHFRVKNS-----AQQGEYDVIAHALLDRQNAPLGYNLTLKATDAGKPPRSSYLTLP 411
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 PVFSDF-VYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
PVF++ A+V E+ P GT+V++ A DADPPG +S+++Y + G G +F+ID+ G
Sbjct: 1104 PVFAERQALSASVPEDAPPGTVVLSAAATDADPPGRDSRLAYYIVAGSGKAHFSIDDTG 1162
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 41/113 (36%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A V+E+ +G ++ + A DAD G N +++YS+ GD FTID
Sbjct: 3445 NPPVFSQTSYGAKVREDAGVGVRIVQVIADDAD-AGTNGRVTYSIARGDPDNCFTID--- 3500
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
D G I V LDRE P Y L +RA D+G P E
Sbjct: 3501 -----------ADTGY------ISVSSRLDRESKP-AYVLEVRARDRGLPALE 3535
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F Y V+EN+P+G ++ DAD P ++ ++ + G+ +G F ++ +G
Sbjct: 3550 NPPLFEKTNYTEVVQENKPLGHTILKFIVTDADAPPNSAPYTFDFQSGNEMGAFRLEQDG 3609
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
F T+ + K + Y L +R D GTPP
Sbjct: 3610 ----FLRSATRFNHRIKDR------------------YVLQIRVFDNGTPP 3638
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 25/112 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
NAP FS Y A ++E+ PIGTLV L+A D D G +SYS+ + D + +
Sbjct: 994 NAPKFSLSAYSARIREDVPIGTLVAVLEAFDPD-LGAGGIVSYSLPDQSADDITFTVDST 1052
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
G L T K+ L +R++ Y +T+RA D G P
Sbjct: 1053 SGTLR------------TAKQ------LDFEERQV----YGVTVRATDGGRP 1082
Score = 40.4 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVFS +Y+A++ E P T VI LK +D + G N+++ + GG+ G F ++
Sbjct: 420 NSPVFSREIYEASLPETAPPNTPVIRLKVSDRN-QGSNARVYIEIVGGNEGGEFIVN 475
Score = 39.7 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 22/120 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF + V E+ +GT ++ L+A D D G N + Y++ GGD F
Sbjct: 786 LHYPEFIDFPVEIKVNESVALGTSLVHLRARDRD-LGYNGLLVYAISGGDADSAF----- 839
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
+IDP T + + V+ LDRE Y L + D G P R + P
Sbjct: 840 -----------RIDPVTGE----LKVIGYLDRERES-EYYLNITVYDLGHPQRSASRLLP 883
Score = 38.5 bits (88), Expect = 0.88, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 44/104 (42%), Gaps = 24/104 (23%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y A V+E+ GT+V L D D G + +SY V GD F + G L
Sbjct: 3035 PRFTQEIYSAEVREDAAAGTVVTRLMVQDDDVSG--APLSYFVSAGDPRARFQVRASGEL 3092
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+V + LDRE P Y+L++ A D
Sbjct: 3093 ---------------------LVARALDRETEP-AYSLSVAATD 3114
Score = 38.1 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 30/61 (49%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS VY+ATV G V+TL A D D + Y + GD G F++ G L
Sbjct: 1987 PVFSRSVYEATVLLPTAAGVRVLTLNATDPDELDSVDALKYDIIDGDVRGAFSLSPSGSL 2046
Query: 64 N 64
+
Sbjct: 2047 S 2047
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG----DGLGYFTI 57
NAP F Y+A K ++ G +TL A+D D G N+++SYSV G D G F +
Sbjct: 2714 NAPAFPLREYRAAAKHDRVPGVPFLTLSASDED-VGENARLSYSVYEGELKTDAAGLFAV 2772
Query: 58 D 58
D
Sbjct: 2773 D 2773
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 46/112 (41%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS +Y T+ E+ +GTLV + A D D G N I YS
Sbjct: 3237 NAPRFSAPLYSVTLPEDAELGTLVAKVHATD-DDLGENRLIRYSF-------------VE 3282
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P F + D G I + LDRE + L +RA D G PPR
Sbjct: 3283 PTEAFELTA---DSGI------ITLRTALDRETRA-EHRLLVRASDAGQPPR 3324
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF + +++EN G +V + A DAD G N+ ISYS+
Sbjct: 527 NDPVFEREEIEVSLQENGATGVIVARIVARDAD-SGENAYISYSIA-------------- 571
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ + VP +ID + + +LLD E Y L +RA D G P R
Sbjct: 572 ---NLQPVPFEIDHFSGA----VRTTRLLDYESMRREYILQIRASDWGLPYR 616
Score = 35.4 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y A V E GT V+ + A D G+N+ + YS+ GGD F+++
Sbjct: 3340 NPPEFEFQHYHAAVPEIDAPGTEVVRVMATSRDT-GVNADVYYSLVGGDDREDFSVNRST 3398
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ + + + LD E Y LT++AVD G+PP
Sbjct: 3399 GI--------------------VSIARPLDYERRK-EYYLTVQAVDGGSPP 3428
>gi|348582123|ref|XP_003476826.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4-like [Cavia
porcellus]
Length = 4819
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 55/120 (45%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y ++ EN P+G+ V+ DAD G+NS+++YS+ GD L F ID G
Sbjct: 1940 NPPIFSLNSYSTSLMENLPLGSTVLVFNVTDADD-GINSQLAYSIASGDSLAQFAIDKNG 1998
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L V+K LDRE YNL ++ D P + +T +
Sbjct: 1999 ILK---------------------VMKALDRESQSF-YNLVVQVHDLPQLPASRFTSTAQ 2036
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS +Y + E PIGT V + A D+D S+ SY + G+ G F+
Sbjct: 3404 PVFSLNIYSVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGAFS------- 3456
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I V LDRE P+ YNLT+ AVD GTP
Sbjct: 3457 ---------INPQTGQ----ITVTAELDRETLPI-YNLTVLAVDSGTP 3490
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ VY+ + E P G+ V + A D D G+N+ + YS+ G+ LG+F I
Sbjct: 473 PVFAQQVYRVNLSEEAPPGSYVSGVSATDGD-SGLNANLRYSIISGNKLGWFCIS----- 526
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T G LDRE+A L + A D+G P+ +Y
Sbjct: 527 EHSGLVTTGATGG-------------LDRELAS-EIVLNISARDQGVHPKVSY 565
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD P N IS + GG NE HF + +K
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSPAANGNISVQILGG---------NEQ--RHFEVQRSK 413
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK-GTPPRETYKA 118
+ P I V LDRE P YNLT+ D G PP +A
Sbjct: 414 V-PNLSL----IKVASALDRERIP-SYNLTVSVSDNYGAPPAAEVRA 454
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 22/121 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS AT+ E+ IGT+V T+ A D D MN + YS+ G+ G F I++
Sbjct: 3087 HTPEFSQSHMSATIPESHSIGTIVRTVSARDRD-AAMNGLVRYSISAGNEEGIFAINSST 3145
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ +V+ K LD E+ + +T+RA D G R Y +
Sbjct: 3146 GV--------------------LVLAKALDYELCQ-KHEITIRATDGGWVARTGYCSVTI 3184
Query: 122 N 122
N
Sbjct: 3185 N 3185
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 54/110 (49%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQ V E+ +G+ V+ + AADAD G N+ I Y ++ +EG
Sbjct: 246 NPPVFGSSHYQXGVPEDAVVGSSVLQVAAADAD-EGTNADIRYRLQ-----------DEG 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P +DP T I V + LD E A Y+LT++AVD+G P
Sbjct: 294 -------TPFHMDPETGL----ITVREPLDFE-ARRQYSLTVQAVDRGVP 331
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G N+ + YS+ G + G F+
Sbjct: 1311 NTPSFPKSTLFVDVLENMRIGELVSSVTATDSD-SGDNADLHYSITGTNNHGTFS----- 1364
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1365 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1402
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y+ + E+ GT ++ + AAD D G N ++ Y + G+ F ID+
Sbjct: 2150 NNPVFAQALYKVEINEDTLTGTDILQVFAADGD-EGTNGQVRYGIVDGNTNQEFRIDSVT 2208
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE-IAPLGYNLTLRAVDKGTPPR 113
I V K LDRE IA Y LT++A D+G+ PR
Sbjct: 2209 GA--------------------ITVAKPLDREKIAT--YLLTVQAADRGSTPR 2239
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G VI A D+D G++ + SY + G+ G F +D
Sbjct: 131 NAPVFPDPSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIIRGNEAGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P R Y
Sbjct: 189 -----------ITLNPSGEGAFLHLVSKGGLDREVTP-NYQLLVEVEDKGEPKRRGY 233
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y+ T+ E++P+ + ++A+D D G N +I+Y++ G+ F I +G
Sbjct: 992 NPPVFDQLSYEVTLSESEPVNSRFFKVQASDKD-SGANGEIAYTISEGNTGDAFGIFPDG 1050
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D + + +VV DR + PL + + +
Sbjct: 1051 QL----YIKSELDRELQDRYVLLVVAS--DRAVEPLSATVNVTVI 1089
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 24/108 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F +Y T+ E+ P GT V+ + A+DAD N+ ISYS+ GG+ FT
Sbjct: 2360 NVPTFGSKMYFTTIPEDAPTGTDVLLVNASDAD-ASTNAVISYSIIGGN--SQFT----- 2411
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
I+P T + I+ LLDRE Y L + + D G
Sbjct: 2412 -----------INPSTGQ----IITSALLDRETKD-NYTLIVVSSDAG 2443
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF Y TV EN P GT VI L A D D G N+ I+YS++ D F ID
Sbjct: 3192 NSPVFVPDEYFPTVLENAPSGTTVIHLNATDVD-SGTNAVIAYSIQSSDS-DLFVID 3246
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 22/109 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQAT+ E T V+ + A+D D G N I YSV G+ F ID+
Sbjct: 1206 NAPKFLKDFYQATISETAANLTQVLRVSASDVD-EGKNGLIHYSVIKGNEERQFAIDSTS 1264
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGT 110
+ ++ LD E P Y+L ++AVD GT
Sbjct: 1265 G--------------------QVTLIGKLDYEATPT-YSLVIQAVDSGT 1292
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A ++EN+P G+ + T+ A D D G+N + YS+ GD
Sbjct: 685 NSPVFYPVQYFAHIQENEPGGSYITTVSATDPD-LGLNGTVRYSISAGD 732
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVFS Y V EN +G V ++ A+ D +NS ISY + GD G F I+
Sbjct: 789 NPPVFSQAAYSFVVFENVALGYHVGSVSASSMD---LNSNISYLITTGDQKGMFAIN 842
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP F Y V +N +GT +I + A D G+NS++ Y + + LG F +D++
Sbjct: 2981 NAPQFLSDKYFTPVTKNVKVGTKLIKVTAVDDKDFGLNSEVQYFISNENYLGKFKLDSD 3039
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 22/113 (19%)
Query: 4 PVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
PVFS Y +V EN P GT ++ L A D D G N + +S++ + E
Sbjct: 580 PVFSQPEGYNVSVVENSPAGTELLVLGATDGD-LGDNGTVRFSLQ----------ETESD 628
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
FR +DP + + + + LDRE Y+L + A D G+PP+ +
Sbjct: 629 QRLFR-----LDPVSGR----LSTISSLDREEQAF-YSLLVLATDLGSPPQSS 671
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF + TV+EN G+ ++ L A DAD G N+ ++Y++ G F ID E
Sbjct: 1736 NPPVFPTDMLDLTVEENIGDGSKIMQLTAMDAD-EGANALVTYTIISG-ADDSFRIDPES 1793
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
++ TK ++ +Y+++V + + + N+T+ V+ TP
Sbjct: 1794 G----DLIATKRLDRERRSKYSLLVRADDGLQSSDMRINITVSDVNDHTP 1839
>gi|115666275|ref|XP_785445.2| PREDICTED: protein dachsous-like [Strongylocentrotus purpuratus]
Length = 3342
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 55/110 (50%), Gaps = 23/110 (20%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NEG 61
+PVF + +Y A+V EN +G VIT+ A D D NSKI+Y + G+ G F ID N+G
Sbjct: 2489 SPVFVEDIYSASVSENVSLGHHVITVVAEDMDLSPENSKINYFIESGNDQGKFKIDANDG 2548
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+I VL+ LDRE A Y L + AVD G P
Sbjct: 2549 ---------------------SITVLERLDRE-ATDTYTLIIGAVDNGEP 2576
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 51/114 (44%), Gaps = 26/114 (22%)
Query: 2 NAPVFS-DFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAPVFS D YQA+V+E QP G V + A D D G+ ISYS+ D F ID+
Sbjct: 1233 NAPVFSQDRTYQASVREEQPAGEFVAWIIATDTD-SGVLGNISYSLI--DSSPKFIIDSS 1289
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
G ++ +DRE Y LT+ A D G PP +
Sbjct: 1290 GVIS---------------------TAAAIDREDESY-YTLTVLAQDGGNPPMQ 1321
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y ++ EN PI T V+ ++A D D G N+ I+Y+ T +N+
Sbjct: 1027 NGPVFTMGFYPVSILENLPISTPVVQVEATDND-RGANALITYT---------LTPNNDS 1076
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
P +F + P +E + ++LDRE+ + LT+ A D G+PP+ +
Sbjct: 1077 P--YFAVFP---------REGWLYTRQVLDRELKST-FTLTIMASDSGSPPQNS 1118
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 48/110 (43%), Gaps = 26/110 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y + EN P GT V ++A D D G N +++Y++ G FTID EG
Sbjct: 1132 NAPHFTKKSYHFHINENLPAGTEVDRVEAVDPD-LGPNGQVTYTLSPS---GDFTIDEEG 1187
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I LDRE A Y L +RAVD G P
Sbjct: 1188 V---------------------IRTTHPLDRE-AAYSYRLIIRAVDGGNP 1215
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 26/118 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ + AT+ E+ P+ T V+ + A+D D G+N ++ ++++ DG
Sbjct: 284 NSPVFTLTSFTATINESAPVNTTVLQVTASDED-EGLNGEVVFNLQRDDGF--------- 333
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVL-KLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
FRI P IV L K+L+ E A ++ + A DK PP + A
Sbjct: 334 ----FRIDPAS----------GIVYLNKVLNYEDAQ-AHDFLVIAQDKAEPPMSSQPA 376
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 12/116 (10%)
Query: 2 NAPVFSDFVYQAT--VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N PVF V +++ V E++P+G VI + A D D G N ++ Y++ G+ G F++D
Sbjct: 1548 NNPVF---VSRSSTDVMEDEPVGFNVIHIIATDED-SGENGRVGYTITSGNEDGKFSLD- 1602
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVD-KGTPPR 113
+ + +D K++Y +V+L + + LT+R +D PPR
Sbjct: 1603 --AVTGLLTIAHSLDH-EHKRDYELVILATDHGTVQRMATQTLTIRVIDVNDQPPR 1655
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 48/112 (42%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ + T+ ENQ G ++ A DAD G N + YS+ GGD
Sbjct: 1757 NNPTFAPPTFDITLPENQSPG-VIHNAIATDADE-GPNGDLIYSITGGD----------- 1803
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P N F I + I + LDRE Y LT+ A D+GT PR
Sbjct: 1804 PKNAFSI---------NQSTGAIFTVGALDRE-DEATYTLTITATDQGTSPR 1845
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG---GDGLGYFTID 58
P F Y V EN P+ T V T A D D G +++YS+RG +G YFTID
Sbjct: 2702 PYFPQLFYHFLVPENMPVETYVFTAGALDND-AGEYGELTYSIRGLGPSNGDDYFTID 2758
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++P+F Y+ + EN T ++T+ A D D G N ++ YS+ G F ID
Sbjct: 2594 HSPIFDHVQYEGRIAENATASTYILTVHATDRD-IGYNGEVEYSIISGTYSDLFAID 2649
>gi|345324502|ref|XP_003430824.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 3-like
[Ornithorhynchus anatinus]
Length = 4517
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 52/112 (46%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + ++ YS+R G GLG F ID E
Sbjct: 1034 LHTPYFPDFAAVGSVKENSRIGTSVLQVTARDED-SGRDGEVQYSIRDGSGLGRFNIDEE 1092
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I +LDRE Y LT+ A D+G P
Sbjct: 1093 TGV--------------------IYTADVLDRETTG-SYWLTVYAADRGVVP 1123
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 2916 NAPAFAHEVYRGHVKESDPPGEVVAVLSTRDRDTSDLNRQVSYHITGGNPRGKFAL---- 2971
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y+L + A D
Sbjct: 2972 --------------GLVQNEWKVYVKRPLDREEQDV-YSLNITATD 3002
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+N+PVFS VY A V+EN GT V+ ++A D D G +I +S+ FTID+
Sbjct: 2487 LNSPVFSQNVYVAEVRENAAPGTKVVHVRATDGD-AGPYGRIDFSIINDFAKDRFTIDSH 2545
Query: 61 GPLN 64
G +
Sbjct: 2546 GQIQ 2549
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 49/108 (45%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y A + E+ P L++ + A D D G N ISYS+ G +F
Sbjct: 3021 NSPVCDQVAYTALIPEDIPSNKLILKISAKDPD-VGSNGDISYSLYGSGNNKFF------ 3073
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+DP + + + L LLDRE P+ YNL +RA D G
Sbjct: 3074 -----------LDPESGE----LKTLALLDREKIPV-YNLIVRATDGG 3105
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 22/111 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F + Y+A V E+ P+GT ++ + A+D D G N I+YS+ + L + +
Sbjct: 466 PEFGEPSYEAFVNESVPVGTSIVAVSASDRD-KGENGYITYSIASLNVLPF-------SI 517
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
N F V I + LD E AP Y +RA D G+P R
Sbjct: 518 NQFTGV--------------ISTSEELDFESAPESYRFFVRASDWGSPYRH 554
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 23/107 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A V EN L+ ++A D D G+N K+ YS+ GYF+ID
Sbjct: 3123 NPPVFSSDHYSACVYENTATKALLTRVQATDPD-VGVNRKVVYSL-ADSANGYFSIDRSS 3180
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK 108
+ I++ + LDRE+ YN++++A D+
Sbjct: 3181 GI--------------------IILEQPLDREVQS-SYNISVKASDQ 3206
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 17/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT----- 56
NAP+ S+ +Y V EN P VI ++A D D G N K++Y + G+ +F
Sbjct: 1140 NAPLTSEPIYYPMVMENSPKDVSVIQIQAQDPD-SGSNEKLTYRITSGNPQNFFAMNFKT 1198
Query: 57 ---------IDNEGPLNHFRIVPTKIDPGTKKKEYNI-VVLKLLDR 92
+D E HF V T D G+ K+ + VV+++LD
Sbjct: 1199 GVITTTSRKLDREQQAEHFLEV-TVTDGGSSPKQSTVWVVVQVLDE 1243
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 24/110 (21%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFR 67
F V+E+ P+G ++ ++A+DAD G N K+ +++ G+ G F ID E G L
Sbjct: 725 FPANVAVREDLPVGAGILKIQASDAD-AGFNGKVVFTISDGNTDGRFAIDLETGQLR--- 780
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL LDRE L Y L + D G P R +++
Sbjct: 781 ------------------VLMPLDREQTDL-YLLNITIYDLGKPQRSSWR 811
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 47/113 (41%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG--DGLGYFTIDN 59
NAPVF Y AT+ E IGT V+ + A+DAD N + Y + + YF ID+
Sbjct: 2279 NAPVFDQPSYSATLSEASLIGTPVLQVVASDADSES-NRLVQYQIVQDTFNSTDYFHIDS 2337
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L I+ +LLD E L +RA D G PP
Sbjct: 2338 SSGL--------------------ILTARLLDHESVQRS-TLKVRATDSGFPP 2369
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
NAP F+ VY A + E+ +G V+ L A D D P N +I +S+ GD
Sbjct: 3333 NAPQFNQEVYSAVISEDASVGDSVVLLIAEDVDSPP-NGRIHFSIVSGD 3380
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ GT V+ + A D G N++I+Y +R G+ G F I++
Sbjct: 3228 NPPVFERRDYLVTVPEDTSPGTQVLAVFATSKDI-GTNAEITYLIRSGNERGKFRINS-- 3284
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ I V++ LD E+ Y L + A D GTP
Sbjct: 3285 ------------------RTGEISVIEELDYELCKDFY-LVVEAADGGTP 3315
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 18/113 (15%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-------RGGDG-LGYFTIDNE 60
+V+ V E+ P T++ DP ++ + Y+V G +G + +I
Sbjct: 249 YVHIERVNEHAP------TIQVVTHDPFPLDQEPVYAVVNIDDPDEGANGEIESVSIVAG 302
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
PL F +V G EY + K +D E P GYNLTL+A D+G+P +
Sbjct: 303 DPLEQFFLVRE----GKWINEYKMKERKPIDWENFPYGYNLTLQAKDRGSPQK 351
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL----GYFTI 57
N P F Y A V E P GT +I +KA D D G N +++Y++ L F I
Sbjct: 2806 NKPAFDASSYDAIVMEGMPAGTKLIQVKAEDPD-WGANGQVTYALYSDTDLPGVTQAFGI 2864
Query: 58 D-NEGPLNHFRIVPTKIDP 75
D N G ++ R + + DP
Sbjct: 2865 DSNSGWISTLRDLDHEADP 2883
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y A V+ + GT + + A D D G N ++Y +R G G
Sbjct: 2076 NTPVFVGLPYYAAVQVDAEPGTSIYRVTAIDRD-KGANGDVTYLLREGYG---------- 2124
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
HF I P+ D + + + D +++ + Y++ + A D G+P
Sbjct: 2125 ---HFEIDPSSGD---------VTLREAFDSDLSNIEYSVVVLARDGGSP 2162
>gi|291387668|ref|XP_002710368.1| PREDICTED: FAT tumor suppressor 2 [Oryctolagus cuniculus]
Length = 4349
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ FV+Q V+EN P GT V+ + A D D G++ ++ Y +R G GL F+I+ +
Sbjct: 1027 LHPPRFASFVHQGQVQENSPSGTQVMLVAAHD-DDSGLDGELQYFLRAGTGLAAFSINQD 1085
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I L LDRE P Y LT+ AVD+G+ P
Sbjct: 1086 TGM--------------------IQTLAPLDREFVPF-YWLTVLAVDRGSVP 1116
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 38/109 (34%), Positives = 53/109 (48%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F +Y V E+ +G +V+T+ A D D P +NS I+YS+ GG+ LG+FTI
Sbjct: 3321 PRFRQELYGTRVLESAVVGAVVLTVSATDEDGP-LNSAITYSLVGGNQLGHFTI------ 3373
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+ + V K LD E P Y+L +RA D G P
Sbjct: 3374 --------------HPKKGELQVAKALDWEQTP-SYSLRVRATDSGQTP 3407
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y+ +V EN G LV TL+ DAD N +++ + GD LG F I G
Sbjct: 2904 NAPQFASEDYRGSVVENSEPGELVATLETLDADVSEQNRQVTCYITEGDPLGQFGISQVG 2963
Query: 62 PLNHFRIVPTKI 73
N +RI KI
Sbjct: 2964 --NEWRISSKKI 2973
Score = 43.1 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+APVF+ Y+ T+ EN P GT ++ + A D D G N ++YS+ G G
Sbjct: 454 HAPVFNRSSYEGTLDENVPPGTSILAVTATDGD-RGENGFVTYSIAGPKG---------- 502
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
VP I+P I K +D E+ Y +RA D G+P R
Sbjct: 503 -------VPFSINPYLGI----ISTSKPMDYELMRRMYTFRVRASDWGSPFR 543
Score = 42.0 bits (97), Expect = 0.078, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P FS VY +V E P T VI L A+D D G N +SY + G D +F I+
Sbjct: 2268 NPPTFSQLVYTTSVSEGLPAQTPVIQLLASDQD-SGQNQDVSYQIVEDGSDVSKFFQING 2326
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I ++ LD E A +++ +RA+D+G PP
Sbjct: 2327 STG--------------------EISTVQELDYE-AQQHFHVKVRAMDRGDPP 2358
Score = 40.0 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 22/113 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ Y+A+V + GT ++ ++A DAD G N+++ YS+ G+ + +F+ID
Sbjct: 1550 LHPPHFTQHHYEASVPDTIAPGTELLQVRATDAD-RGANAEVRYSLLKGNSVDFFSID-- 1606
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
L V K+D + + + LT++A D+G+P R
Sbjct: 1607 -ALLGIITVVQKLDQTNRVR------------------HTLTVKAEDQGSPQR 1640
Score = 38.5 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P V+ +++E P+GT V+ L+A D D K+++++ GD +G+F I
Sbjct: 1133 NPPRMHRPVFYTSIQEGVPVGTSVLQLEAWDPDSSS-KGKLTFNITSGDHVGFFAIH--- 1188
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLD 91
P ++D + KE +I+ + +LD
Sbjct: 1189 PFTGLLTTAKQLD--RENKEEHILEVTVLD 1216
Score = 38.5 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y TV+EN PIG+ V+ L +D D P S+ + G+ F + +G
Sbjct: 3424 NPPRFFQLNYSTTVQENAPIGSKVLELILSDPDSPENGPPYSFRITKGNTGSAFRVTPDG 3483
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPL 97
L T + + +E+ + +++ D + PL
Sbjct: 3484 WL------VTTVGLSRRAQEWYQLHIEVSDSGVPPL 3513
Score = 35.4 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLG---YFTID 58
N PVF Y+A + EN P GT VI + A D D G + ++SY + G F ID
Sbjct: 2795 NRPVFEADPYRAFLTENMPGGTTVIQVTANDQD-TGNDGQVSYRLSSDPGSNIHELFAID 2853
Query: 59 NE 60
+E
Sbjct: 2854 SE 2855
Score = 35.0 bits (79), Expect = 9.8, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P+F D +++++ P+G V+T+ A D D + Y + G+ L YF I+
Sbjct: 560 NQPMFEDVNCTGSIRQDWPVGKSVMTMSAIDVDEL---QNLKYEIVSGNELDYFDIN 613
>gi|47216303|emb|CAF96599.1| unnamed protein product [Tetraodon nigroviridis]
Length = 996
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 56/118 (47%), Gaps = 22/118 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQAT+ EN P GT V+T+ A D D RG +G ++I N
Sbjct: 455 NAPEFQQTSYQATIDENAPAGTSVVTVTATDRD------------RGENGYVTYSITNMS 502
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
P P ID T I ++LD E+ P YNL +RA D G+P R +A+
Sbjct: 503 PQ------PFVIDYFTGV----ITTSEVLDYELMPRIYNLKVRASDLGSPFRREVEAS 550
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 11/90 (12%)
Query: 29 KAADADPPGMNSKISYSVRGGDG-----LGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYN 83
+ ADADP + + +V GD + +I PL F+ V + PG+K EY
Sbjct: 259 RRADADPDP--TYVIVTVEDGDHGPNGEIASLSIVAGDPLQQFKAV--RSSPGSK--EYR 312
Query: 84 IVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I +K +D + P GYNLTL+A DKG+PP+
Sbjct: 313 IKAVKDVDWDSQPFGYNLTLQAKDKGSPPQ 342
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 23/116 (19%)
Query: 3 APVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
AP F++ F VKE+ P+G ++ L A D+D G N K+ Y + GG+ +F +D E
Sbjct: 709 APQFAEAFPNVIEVKEDLPVGARIVHLSATDSD-SGFNGKLVYVISGGNTGSHFVVDMET 767
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ V LDRE A Y L + D G P + + +
Sbjct: 768 GW--------------------LQVYSPLDRETAN-SYTLNVTVYDLGIPQKSSSR 802
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 47/108 (43%), Gaps = 24/108 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F Y + E P+GT +I + ++D D G N + YS+ G G F ID
Sbjct: 814 NSPQFLQESYSVQISEGTPVGTEIIQVDSSDKD-QGKNGIVKYSILG--GTDDFAIDE-- 868
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
D G + V K LDRE+ P+ Y L + A D+
Sbjct: 869 ------------DTGV------VSVTKPLDRELHPV-YVLKIAARDQA 897
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN-E 60
N P F Y+ V+E+ P+GT+++ L+A D D G +S++ YS+ +G G+F +D
Sbjct: 919 NPPKFVPPNYRVKVREDLPVGTVIMWLEAHDPD-VGPSSQVRYSLM-DNGDGHFEVDKLS 976
Query: 61 GPLNHFRIVPTK 72
G R + T+
Sbjct: 977 GACGSCRTLTTR 988
>gi|326919108|ref|XP_003205825.1| PREDICTED: protocadherin Fat 1-like [Meleagris gallopavo]
Length = 4590
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 56/112 (50%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A + E+ + VIT+ A DAD P N+ I Y++ G+ FTID
Sbjct: 3332 NTPVFSQDTYTAVISEDAMLEQSVITVMADDADGPS-NNHIHYTITDGNQGNPFTID--- 3387
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P++ + I V KLLDRE GY LT++A D G PPR
Sbjct: 3388 --------PSRGE---------IKVTKLLDREKIS-GYTLTVQASDNGNPPR 3421
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 55/116 (47%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P FS F + VKE+ PIG+ V+T+ A D D G + +I YS+R G G+G F ID E
Sbjct: 1030 LHPPRFSVFADKGFVKEDAPIGSSVMTVSAYDED-EGRDGEIRYSIRDGSGMGVFRIDEE 1088
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE Y LT+ A D+G P ++
Sbjct: 1089 KGI--------------------IETADHLDRETTS-HYWLTVYATDQGVVPLSSF 1123
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 18/92 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ +Y+ TV E+ P G ++ L DAD +N ++SY + GGD LG F ++N
Sbjct: 2915 NPPRFTAEIYKGTVSEDDPPGGIIAILSTTDADTEEVNRQVSYYITGGDLLGQFAVEN-- 2972
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
+ E+ + V K LDRE
Sbjct: 2973 ----------------VQNEWKVYVKKSLDRE 2988
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 53/113 (46%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A+ EN PIGT V+ + A D D G N ++YS+ + L +
Sbjct: 460 NPPEFTQTAYKASFDENVPIGTSVMRVSAKDPD-EGENGYVTYSIANLNPLPFV------ 512
Query: 62 PLNHFR-IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+NHF I+ T D LD E+ P YNL +RA D G P R
Sbjct: 513 -INHFSGIISTSED---------------LDYELMPRVYNLRIRASDWGIPYR 549
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 54/112 (48%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ Y TV EN TL+ ++A DAD GMN KI YS+ G F+ID
Sbjct: 3122 NAPVFTVDPYSITVFENTEPKTLLTRVQATDAD-AGMNRKIHYSLVNS-AEGQFSIDEFS 3179
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I + K LDRE+ + Y LTL+A D+G P R
Sbjct: 3180 GI--------------------IRLEKSLDRELQAV-YTLTLKATDEGLPRR 3210
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 10 VYQATVKENQPIGTLV-ITLKAADADPPGMNSKISYSVRGGDG-LGYFTIDNEGPLNHFR 67
VY E P+ T V +T +D DP + + +G +G + I PL FR
Sbjct: 246 VYVEQANEYAPVITAVTLTPSESDKDPTYAIVTVEDNDQGSNGEIASLNIVAGDPLQQFR 305
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
V + PG KEY + + +D E P GYNLTL+A DKG PP+
Sbjct: 306 TVRSV--PG--GKEYRVKAVGHIDWESHPFGYNLTLQAKDKGNPPQ 347
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 23/118 (19%)
Query: 1 MNAPVF-SDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
M+ P F S V+E+QP+G+ +I L A D D G N K+ Y + GG+ F +D
Sbjct: 712 MHTPQFRSTLPSSIEVREDQPVGSSIILLNATDLD-TGFNGKLVYVISGGNEDSSFIVDM 770
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
E + + +L LDRE+ YNL + D G P + +
Sbjct: 771 ESGM--------------------LKILSPLDREVKD-KYNLNVTVYDLGIPQKSAWH 807
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y A+V E+ +GT V+ + AA D N++I+YS+ G+ G F+ID+
Sbjct: 3227 NPPVFEYREYSASVSEDTVVGTEVLQIHAASRDIEA-NAEITYSIVSGNEHGKFSIDSAT 3285
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I ++ LD E + Y LT+ A D GTP
Sbjct: 3286 GA--------------------IFIIDSLDYE-SSHEYYLTVEATDGGTP 3314
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ +G+ V+ + A D D G N+++ YS+ G+ F ID
Sbjct: 1559 HAPWFTSSSYEGRVYESAAVGSAVLQVTALDKD-KGKNAELVYSIESGNIGNSFVID--- 1614
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+ + ++D +++ YNL ++A DKG PP
Sbjct: 1615 PILGIIKIAKELDHSNQEE------------------YNLMVKATDKGDPP 1647
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y ++E+ P GT++ L+A D D G +S++ YS+ G G F +D
Sbjct: 924 NPPKFIPSNYHVKIREDLPEGTIITWLEAYDPD-LGQSSQVRYSLLDS-GDGTFDVD--- 978
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I +++ LD E L YNLT+RA DKG P
Sbjct: 979 -----------------KLSGAIRIVQRLDYEKKQL-YNLTVRAKDKGKP 1010
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PV Y+A + EN P GT VI +K D D G+N +++YS +D
Sbjct: 2806 NKPVLESNPYEAFIVENMPAGTRVIQVKGTDLD-SGLNGQVTYS-----------LDPSQ 2853
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
L+ ++ G I LK LD E+ Y +T+ A D+G
Sbjct: 2854 ELDVIESFAINMETGW------ITTLKELDHEMRD-KYKITVIASDRG 2894
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P+F+ VY+A + E P G V ++A+DAD + K+ YS+ G+ F I+++
Sbjct: 2387 NPPLFNQLVYEAKISELAPRGHFVTCVQASDADRSDAD-KLEYSIMTGNDQKNFVINSK 2444
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F + Y A VK + +G ++ + A D D G N ++ Y ++ + +F ID G
Sbjct: 2078 NAPLFVNLPYYAAVKVDSEVGYVIRRVTAIDKD-AGRNGEVHYYLK--EHHEHFQIDPSG 2134
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVL 87
++ + K +P T KEY + V+
Sbjct: 2135 EIS----LKKKFEPDTVNKEYLVTVV 2156
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 48/113 (42%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD--GLGYFTIDN 59
N P+F++ Y T+ E IGT V+ + A DAD G N ISY + D YF ID+
Sbjct: 2280 NPPMFTEQSYTVTLSEASVIGTSVLQVSATDAD-SGTNRGISYHLIEDDTESHEYFHIDS 2338
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L I+ + LD E + L +RA+D G P
Sbjct: 2339 STGL--------------------ILTTRTLDYEKIQ-QHKLLIRAIDGGMLP 2370
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
M++PVFS Y+ + EN P+ TLV ++A D D G I+Y + F I
Sbjct: 2488 MHSPVFSQNEYEVELAENAPLHTLVTVVRARDED-SGTYGHITYHIINDFAKDRFYISER 2546
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
G + K+D T+ ++ ++ + L+ ++
Sbjct: 2547 GQI----FTSEKLDRETQAEK--VIAISLMAKD 2573
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y ++EN+PIG V+ L D D +++ G+ F ++++G
Sbjct: 3437 NPPVFSKGNYSIIIQENKPIGFSVLQLVVTDKDSSHNGPPFLFTILSGNEENTFQVNHQG 3496
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG 98
I+ T K +++ ++ +K+ D PL
Sbjct: 3497 ------ILTTTAALNRKVRDHYLLHVKVTDNGKPPLS 3527
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP ++ VY V EN P VI ++A D D + K++Y + G+ G+F+I+++
Sbjct: 1136 NAPQTTEPVYYPEVMENSPKDVSVIQIEAFDPDSSS-SEKLTYKITSGNPQGFFSINSKT 1194
Query: 62 PL 63
L
Sbjct: 1195 GL 1196
>gi|292618187|ref|XP_002663586.1| PREDICTED: protocadherin alpha-2 [Danio rerio]
Length = 794
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 60/117 (51%), Gaps = 27/117 (23%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG---GDGLGYFTID-N 59
PVFS +Y+ VKEN P+ T +I++ A+D D G+NS+I YS G D + FTID N
Sbjct: 233 PVFSKPLYKVKVKENTPLETKIISVSASDLD-EGINSEIQYSFHGRGNSDEMLLFTIDSN 291
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
G IVV +D E +P L ++A DKGTPP+ ++
Sbjct: 292 SG---------------------EIVVRGQIDYEESP-AVELRVQARDKGTPPKNSH 326
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP +VKEN GT V + +D D G N + S++G
Sbjct: 339 NAPEIVTTPLMESVKENAKSGTAVALVTVSDIDG-GKNGIVHCSLKGS------------ 385
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
VP K+D + Y++ V LDRE YN+T+ A D+GTPP
Sbjct: 386 -------VPFKLDT-SYNNHYSLEVDGPLDRESVS-QYNITITAADEGTPP 427
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 19/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FSD Y + E+ + V A D+D G+NS Y + D +F++D
Sbjct: 123 NAPLFSDSTYIVNITEDANVEDRVPLPNAKDSD-VGINSLKDYKLSLND---FFSLD--- 175
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I + +V+ K LDRE P +LT+ A D G P+
Sbjct: 176 -----------IHSNQQSMSPELVLQKALDREKQP-SISLTMTAFDGGKTPK 215
>gi|291238398|ref|XP_002739116.1| PREDICTED: predicted protein-like, partial [Saccoglossus kowalevskii]
Length = 2257
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+ + Y A + E+ P+GT+V + A DAD N+ ++Y++ G+ LG+FTID +
Sbjct: 1547 NDPILNPASYSALLDEDTPVGTVVFDVDATDAD-INENADLTYALTSGNDLGHFTIDQDT 1605
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I V +LLDRE YN+ + D GTP R
Sbjct: 1606 GI--------------------ITVEQLLDRETVD-AYNMIVTVTDDGTPTR 1636
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 53/115 (46%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F Y + EN IGT +IT+ A D D G+NS I YS+ G G DN
Sbjct: 1336 NRPLFGQDQYTINIDENIAIGTNIITVVATDED-AGVNSDIQYSIVAGVGQ-----DN-- 1387
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+I+P T + + +D E+ + Y+L + AVD GTP Y
Sbjct: 1388 ---------VEINPTTGV----VSTVADIDYEMYVM-YSLMIEAVDGGTPSLTGY 1428
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 12/116 (10%)
Query: 4 PVFSDFVYQ-ATVKENQPIGTLVITLKAADADPPG-MNSKISYSVRGGDGLGYFTIDNEG 61
PVF Y ATV EN P+G V + A D D G ++ ++ +S+ G+ G+F ID
Sbjct: 1119 PVFQSLPYDDATVIENAPLGKSVYQVGATDDDAAGHVHGQVRFSITSGNSAGHFVIDE-- 1176
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVL------KLLDREIAPLGYNLTLRAVDKGTP 111
++ ++D T+ Y++VV L D A +T+ V+ TP
Sbjct: 1177 -MDGVISTVAELDRETRSS-YDLVVTATDSSAALNDERSAEENVTITVTDVNDNTP 1230
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 47/111 (42%), Gaps = 19/111 (17%)
Query: 2 NAPVFS-DFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P+FS + Y+ V E P+ T V+ L DAD + + I Y G+ F ID
Sbjct: 459 NEPIFSQNIYYRDDVVEGSPVDTSVLALTTTDADSIAL-TTIQYEFVSGNDDDLFKIDQ- 516
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P +I NI+ L + P Y L +RAVD GTP
Sbjct: 517 -PTETIQI-------------KNIIDLDAGSDD--PASYILVIRAVDGGTP 551
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
NAP F+ Y V+EN I T V L A D D G N I+YS+ G +F I+ N
Sbjct: 1652 NAPTFTMATYAFVVQENVDISTSVGQLAATDPD-LGANGFIAYSIESGANSDHFAINSNT 1710
Query: 61 GPLNHFRIV 69
G ++ ++
Sbjct: 1711 GEIHTSAVI 1719
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP-GMNSKISYSVRGGDGLGYFTI 57
NAP F+ Y A+V E+ V + A D D N+ I YS+ G+G G+FTI
Sbjct: 1008 NAPKFTSTGYSASVNEDDATPQAVKIVVATDRDSNLNNNNVIEYSITDGNGDGFFTI 1064
>gi|410909630|ref|XP_003968293.1| PREDICTED: protocadherin Fat 3-like [Takifugu rubripes]
Length = 4673
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 53/111 (47%), Gaps = 22/111 (19%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP FS F +ATVKEN IGT ++ + A D D + +I YS+R G GLG F I+ E
Sbjct: 1100 APYFSQFALKATVKENARIGTTLLQVTAND-DDASRDGEIQYSIRDGSGLGRFAINEETG 1158
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I +LDRE Y LT+ A D+G P+
Sbjct: 1159 M--------------------IYTTDILDRETKD-SYWLTVYATDRGVVPQ 1188
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 24/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P+F+ VY+ +V E+ +G+ V+ + A D D G N+ + YS+ G N+G
Sbjct: 1623 HVPIFTRSVYEGSVYESSAVGSAVVQVTALDKD-KGRNADLQYSIEAG---------NKG 1672
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVDKGTPPRET 115
N F I PT I+ + D ++ +G Y LT+RA D G+PP T
Sbjct: 1673 --NTFHIEPT----------LGIITVS-HDLNLSSIGHYVLTVRATDHGSPPLST 1714
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 42/111 (37%), Positives = 52/111 (46%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS +Y A V E+ +G VI + A D D N + Y++ G N+G
Sbjct: 3406 NAPVFSCQLYTAVVSEDAAMGDSVIQVVAEDVDSKP-NGDVLYTIIAG---------NQG 3455
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F I PT G I V K LDRE P Y+L + A D G PP
Sbjct: 3456 --NQFSIDPTS---GI------IRVNKELDRESVP-SYSLAISACDTGIPP 3494
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
PVF VY+A VKEN +GT VI +KA D+D PG +I YS G F++D G
Sbjct: 2553 GPVFEQNVYEAEVKENSAVGTRVIQVKATDSD-PGAFGQIVYSFVNDLGREKFSMDAFGQ 2611
Query: 63 L 63
+
Sbjct: 2612 I 2612
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 21/115 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMN-SKISYSVRGGDGLGYFTIDNE 60
NAP+ S+ +YQ TV EN P G VI ++A D D ++ K+SY + G+ FTI+
Sbjct: 1204 NAPLTSEAMYQCTVHENSPDGVSVIQIQAQDPDDTALSPDKLSYHIISGNPQNLFTINTN 1263
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
T + T +K LDRE +NL + D G P+ +
Sbjct: 1264 ----------TGLITTTSRK---------LDRE-QQAEHNLEVMVSDSGPSPKHS 1298
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 52/111 (46%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF TVKE+ +GT V+ + AA D G N++I+YS+R G+ G F
Sbjct: 3301 NPPVFEHRDQLVTVKEDVGLGTEVLRVHAASKD-IGTNAEITYSIRSGNEHGKF------ 3353
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I P T I+V + LD E Y LT+ A D GTPP
Sbjct: 3354 ----------HIQPRTGA----ILVSQPLDYETCR-DYFLTVEARDGGTPP 3389
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N PVF+ +Y+A V E P G V ++A+DAD + K+ Y+V G+ FT+D +
Sbjct: 2450 NPPVFNQLLYEAYVNELAPRGHFVTCVQASDADSSDFD-KLEYTVLSGNEKLMFTLDRK 2507
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 25/109 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV VY A+V E+ + ++V+ + A DAD G+N+ + YS+ G
Sbjct: 3094 NSPVCDKAVYAASVPEDLSVHSVVLRVGATDAD-LGVNAWVQYSL-------------HG 3139
Query: 62 PLNH-FRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
P +H FRI P D G K +LDRE+ Y L +A D G
Sbjct: 3140 PGSHDFRIDP---DSGEIKTSV------ILDRELTD-SYRLLAQATDGG 3178
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N P F Y+ V E+ P+GT V+T+ A D D G N I+YS+
Sbjct: 528 NTPTFHQSSYEILVNESVPVGTSVLTVSAQDGD-TGENGYITYSI 571
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N P F + Y +V+E+ P G +V L D D N +++Y + GG+ G F +
Sbjct: 2989 NPPRFLEQNYFGSVQESSPPGEVVAALNTRDDDSSAANRQVTYHITGGNYRGSFAL 3044
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 50/108 (46%), Gaps = 14/108 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ATV E P+ T ++ ++A DAD G+N ++ YS+ GD L D+
Sbjct: 2875 NKPEFVTDAYEATVMEGVPLSTKILQVQALDAD-SGINGQVRYSL--GD-LIRSESDSGA 2930
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
N F I K I LK LD E A Y T+ A D G
Sbjct: 2931 LFNTFSI---------DSKSGWISTLKDLDHESAS-SYVFTVVASDLG 2968
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 21/113 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y TV E+ P V+ + A+D D + ++SYS++ +ID
Sbjct: 1517 NAPVFSQPTYDVTVSEDIPPDAEVVQVVASDRDK---HHQLSYSLQS-------SID-PS 1565
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+ FRI PT GT I L+ LD E L + LT+ D+ P R+
Sbjct: 1566 SMRFFRIHPTL---GT------IYTLQSLDHEACAL-HILTITVKDQEFPYRK 1608
Score = 35.4 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNE 60
N PVF Y+ + E IGT + + A D D N+ I Y + + YF ID+
Sbjct: 2344 NQPVFQKMAYRVVLSETAMIGTPALHVSATDKD-SDKNNIIHYQIFSDHNSTDYFHIDSS 2402
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L I+ +LLD E+ Y+ + A D G PP
Sbjct: 2403 SGL--------------------ILTARLLDHELLQR-YDFVVVATDNGFPP 2433
>gi|427780029|gb|JAA55466.1| Putative cadherin egf lag seven-pass g-type receptor [Rhipicephalus
pulchellus]
Length = 1719
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/61 (49%), Positives = 40/61 (65%), Gaps = 6/61 (9%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++AP F++ V ATV ENQP GT V TL A D + I+Y++ GG+GLG FTID+
Sbjct: 1028 LHAPSFAEQVSSATVDENQPPGTSVTTLAATDEE------DITYTITGGNGLGMFTIDSN 1081
Query: 61 G 61
G
Sbjct: 1082 G 1082
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 23/118 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+APVF + + EN+P+GT + T+ A D D N +SYS
Sbjct: 450 HAPVFDPMPVEVLLDENRPVGTKIFTVHAHDED-EAENGYVSYS---------------- 492
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP-PRETYKA 118
L + VP +DP + + I ++LD E Y L +RA D G+P R+T KA
Sbjct: 493 -LVNLNAVPFSVDPFSGE----ISTTEVLDYETMRHSYMLRIRATDWGSPYQRQTEKA 545
Score = 38.9 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 26/111 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y ++E+ PIG LV ++ A DAD G N ++ YS +D E
Sbjct: 926 NVPHFARAPYVVRIREDLPIGALVTSVHAEDAD-FGDNGRVQYS-----------LDTEN 973
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+DP T + + +LD E L YN+T++A D G PP
Sbjct: 974 ---------FDVDPDTGL----VRLAAMLDFETWRL-YNVTVQAHDCGDPP 1010
Score = 38.5 bits (88), Expect = 0.94, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 13/74 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL---GYFTID 58
N PVFS+ +YQ V E+ GT ++ L A DAD + ++ YS+ + + YF +D
Sbjct: 1423 NWPVFSESLYQVEVSESSSPGTEILQLTATDADE---DQRLFYSIHNSEQVTSNSYFVLD 1479
Query: 59 NEG-------PLNH 65
++ PL+H
Sbjct: 1480 SDTGVLSLALPLDH 1493
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 24/105 (22%)
Query: 12 QATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NEGPLNHFRIVP 70
+ V E+ P+G+++ ++A D D G N ++ Y + GD F +D + G L
Sbjct: 704 ELAVNESTPLGSVLGYIQAKDPDH-GYNGRLVYVISSGDQHSCFRVDMHTGAL------- 755
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+++ LD E+AP + L + A D+G PPR T
Sbjct: 756 --------------LLVAALDYELAP-SHLLNVTAYDQGQPPRST 785
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F Y+ V E GT ++ L A D D G N+ +++S+ G+ F++D+
Sbjct: 1530 HAPEFLQARYEVRVSETAAPGTALLQLGALDRD-RGPNALLTFSIASGNMGSLFSLDSTL 1588
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L + + + L R+ P + LT+RAVD G PP
Sbjct: 1589 GL--------------------LTLSRELSRQTEP-EFFLTVRAVDHGEPP 1618
Score = 35.4 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAP+F Y + E+ P GT V L+AADAD G N+++ +
Sbjct: 799 NAPLFEKPAYSFVINEDAPNGTSVARLRAADAD-QGRNAELHF 840
>gi|345784074|ref|XP_856760.2| PREDICTED: protocadherin Fat 4 isoform 2 [Canis lupus familiaris]
Length = 4980
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 23/118 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y ++ EN P+G+ V+ DAD G+NS++++S+ GD L FT+D G
Sbjct: 1940 NPPIFSLNSYSTSLMENLPLGSTVLVFNVTDADD-GINSQLAFSIASGDSLSQFTVDKNG 1998
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
L VLK LDRE YNL ++ D P + +T
Sbjct: 1999 VLK---------------------VLKSLDRESQSF-YNLVVQVHDLPQLPASRFTST 2034
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 51/108 (47%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+FS +Y + E P GT V + A D+D S+ SY + G+ G F+
Sbjct: 3402 PIFSLNIYSVQISEGVPTGTHVTFVSAFDSDSVPSWSRFSYFIGSGNENGAFS------- 3454
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I V LDRE P+ YNLT+ AVD GTP
Sbjct: 3455 ---------INPQTGQ----ITVTAELDRETLPI-YNLTVLAVDSGTP 3488
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ VY+ + E P G+ V + A D D G+N+ + YS+ G+GLG+F I
Sbjct: 473 PVFAQQVYRVNLSEEAPPGSYVSGVSATDGDS-GLNANLRYSIVSGNGLGWFHIS----- 526
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T G LDRE+A L + A D+G P+ +Y
Sbjct: 527 EHSGLVTTGAAGG-------------LDRELAS-QIVLNISARDQGVHPKFSY 565
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF +Y+ + EN GT +I + AAD D G N ++ Y + G+ F ID+
Sbjct: 2150 NNPVFMQALYKVEINENTLTGTDIIQVYAADGD-EGTNGQVRYGIIDGNANQEFRIDSVT 2208
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I V K LDRE P Y+LT++A D+G+ PR
Sbjct: 2209 GA--------------------ITVAKPLDREKTPT-YSLTVQATDRGSTPR 2239
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD P N IS + GG NE HF + +K
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSPAANGNISVQILGG---------NEQ--RHFEVQSSK 413
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK-GTPPRETYKA 118
+ P I V LDRE P YNLT+ D G PP +A
Sbjct: 414 V-PNLSL----IKVASALDRERIP-SYNLTVSVSDNFGAPPGTAARA 454
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N+ I Y ++ +EG
Sbjct: 246 NPPVFGSSHYQAGVPEDAAVGSSVLQVAAADAD-EGTNADIRYRLQ-----------DEG 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P ++DP T I V + LD E A Y+LT++A+D+G P
Sbjct: 294 -------TPFQMDPETGL----ITVREPLDFE-ARRQYSLTVQALDRGVP 331
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G N+ + YS+ G + G F+
Sbjct: 1311 NTPSFPKSTLFVDVLENMRIGELVSSVTATDSD-SGDNADLHYSITGTNNHGTFS----- 1364
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1365 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1402
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF Y TV EN P GT VI L A DAD G N+ I+Y+V+ D F ID
Sbjct: 3190 NSPVFFPDEYFPTVLENAPSGTTVIHLNATDAD-SGTNAVIAYTVQSSDS-DLFVID 3244
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G VI A D+D G++ + SY + G+ G F +D
Sbjct: 131 NAPVFPDPSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIVQGNEAGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P R Y
Sbjct: 189 -----------ITLNPSGEGAFLHLVSKGGLDREVTP-QYQLLVEVEDKGEPKRRGY 233
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y+ T+ E++P+ + ++A D D G N +I+YS+ G+ F I +G
Sbjct: 992 NPPVFDQLSYEVTLSESEPVNSRFFKVQAFDKD-SGANGEIAYSIAEGNTGDAFGIFPDG 1050
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D + + +VV DR + PL + + +
Sbjct: 1051 QL----YIKSELDRELQDRYVLLVVAS--DRAVEPLSATVNVTVI 1089
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQAT+ E+ T V+ + A+D D G N I YSV G+ F ID+
Sbjct: 1206 NAPKFLKDFYQATISESAANLTQVLRVSASDVD-EGNNGLIHYSVIKGNEERQFAIDSTS 1264
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ ++ LD E P Y+L ++AVD G P
Sbjct: 1265 G--------------------QVTLIGKLDYEATP-AYSLVIQAVDSGAVP 1294
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A ++EN+P G+ + T+ A D D G+N + YS+ GD
Sbjct: 685 NSPVFYPVQYFAHIQENEPGGSYITTVSATDPD-LGLNGTVRYSISAGD 732
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 50/121 (41%), Gaps = 22/121 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS AT+ E+ IG +V T+ A D D MN I YS+ G+ G F I++
Sbjct: 3085 HTPEFSQSHMSATIPESHSIGAIVRTVSARDRD-AAMNGLIRYSISSGNEEGIFAINSST 3143
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ + + K LD E+ + +T+ A D G R Y +
Sbjct: 3144 GI--------------------LTLAKALDYELCQ-KHEMTISATDGGWVARTGYCSVTV 3182
Query: 122 N 122
N
Sbjct: 3183 N 3183
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVFS Y V EN +G V ++ A+ D +NS ISY + GD G F I+
Sbjct: 789 NPPVFSQAAYSFVVFENVALGYHVGSVSASTMD---LNSNISYLITTGDQKGMFAIN 842
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAP F Y V +N +GT +I + A D G+NS++ Y + + G F +DN
Sbjct: 2979 NAPQFLKTKYFTPVTKNVKVGTKLIKVTAVDDRDFGLNSEVEYLISNENHFGKFKLDN 3036
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 26/110 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ +Y T+ E+ P GT V+ + A+DAD + + +R G FT
Sbjct: 2360 NVPTFASKMYFTTIPEDAPTGTDVLLVNASDAD-----ASTNAVIRIIGGNSQFT----- 2409
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I+ LLDRE Y L + + D G+P
Sbjct: 2410 -----------INPSTGQ----IITSALLDRETKE-NYTLVVVSSDAGSP 2443
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF + TV+EN G+ ++ L A DAD G N+ ++Y++ G F ID E
Sbjct: 1736 NPPVFPTDMLDLTVEENIGDGSKIMQLTAMDAD-EGANALVTYTIISG-ADDSFRIDPES 1793
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
++ TK ++ +Y+++V + + + N+T+ V+ TP
Sbjct: 1794 G----DLIATKRLDRERRSKYSLLVRADDGLQSSDMRINITVSDVNDHTP 1839
>gi|148703183|gb|EDL35130.1| mCG142341 [Mus musculus]
Length = 2317
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y+ +KEN GT +I + AAD D G N ++ Y + GG+ F ID+
Sbjct: 101 NNPVFAQAMYRVQIKENILTGTDIIQVSAADND-EGTNGQVRYGIVGGNTHQEFRIDSVT 159
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I V K LDRE P Y LT++A D+G+ PR
Sbjct: 160 GA--------------------ITVAKSLDRETTP-AYTLTVQATDRGSSPR 190
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS Y+ + E PIGT V + A D+D S+ SY + G+ G F+
Sbjct: 1307 PVFSLSTYRVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGAFS------- 1359
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I V LDRE P+ YNLT+ AVD GTP
Sbjct: 1360 ---------INPQTGQ----ITVTSGLDRESLPV-YNLTVLAVDSGTP 1393
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF + TV EN P GT VI L A DAD G N+ I+Y+V+ D F ID
Sbjct: 1095 NSPVFVPDEFFPTVMENAPSGTTVIHLNATDAD-SGANAVIAYTVQSSDS-DLFVID 1149
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS AT+ E+ IG++V T+ A D D MN ISY++ G+ G F I++
Sbjct: 990 HTPEFSQNHISATIPESHSIGSVVRTVSARDRD-TAMNGLISYNITSGNEEGIFAINSST 1048
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ + + K LD E++ + +T+ A D G R Y
Sbjct: 1049 GV--------------------VTLAKALDYEMSS-KHEMTISATDGGWVARTGY 1082
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F Y V +N +GT +I + A D G+NS++ Y V G+ LG F +DN+
Sbjct: 884 NPPQFLQNKYFTPVTKNVKVGTKLIKVTAVDDKDFGLNSEVEYFVSDGNHLGKFKLDND 942
>gi|47209331|emb|CAF93466.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1151
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 53/201 (26%), Positives = 80/201 (39%), Gaps = 86/201 (42%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY----------------- 44
NAPVFS VY+ ++ EN P+ TLVIT+ AADAD G+NS+I+Y
Sbjct: 234 NAPVFSQSVYKTSLPENSPLDTLVITVSAADAD-EGVNSEITYGFDHVLEDENVFLLDTK 292
Query: 45 --------------------SVRGGDGLG---YFT-------IDNEGPLNHFRI----VP 70
+ DGLG Y T +++ P+ H + +P
Sbjct: 293 TGVVRVNGAIDYEKIPSYEMQISAKDGLGLVAYATLIIEITDVNDNAPVIHLKSLTNPIP 352
Query: 71 TKIDPGTK---------------------------------KKEYNIVVLKLLDREIAPL 97
+ PG++ K Y++V LDRE+
Sbjct: 353 ENVSPGSEVGIINVQDRDSENNRQVRCSIQQNVPFKLVASIKNYYSLVTTGQLDRELVS- 411
Query: 98 GYNLTLRAVDKGTPPRETYKA 118
YN+T+ A D+G+PP + K+
Sbjct: 412 DYNITISATDEGSPPLSSSKS 432
>gi|351701751|gb|EHB04670.1| Protocadherin Fat 4 [Heterocephalus glaber]
Length = 4953
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 55/120 (45%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y ++ EN P+G+ V+ DAD G+NS+++YS+ GD L F +D G
Sbjct: 1939 NPPIFSLNSYSTSLMENLPVGSTVLLFNVTDAD-DGINSQLAYSIASGDSLTQFAVDKNG 1997
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L VLK LDRE YNL ++ D P + +T +
Sbjct: 1998 VLK---------------------VLKALDRESQSF-YNLVVQVHDLPQVPASRFTSTAQ 2035
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 51/108 (47%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS +Y + E PIGT V + A D+D S+ SY + G+ G F+
Sbjct: 3401 PVFSLNIYNVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGAFS------- 3453
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
++P T + I V LDRE P+ YNLT+ AVD G P
Sbjct: 3454 ---------VNPQTGQ----ITVTAELDRETLPI-YNLTVLAVDSGIP 3487
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ VY+ + E P G+ V + A D D G+N+ + YS+ G+GLG+F I
Sbjct: 472 PVFAQQVYRVNLSEEAPPGSYVSGVSATDGDS-GLNANLRYSIISGNGLGWFHIS----- 525
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T G L+RE+A L + A D+G P+ +Y
Sbjct: 526 EHSGLVTTGATGG-------------LNRELAS-EIVLNISARDQGVHPKVSY 564
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N+ I Y ++ +EG
Sbjct: 246 NPPVFGSSHYQAGVPEDAVVGSSVLQVAAADAD-EGTNADIHYRLQ-----------DEG 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P ++DP T I V + LD E A Y+LT++AVD+G P
Sbjct: 294 -------TPFQMDPETGL----ITVREPLDFE-ARRQYSLTVQAVDRGVP 331
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 48/103 (46%), Gaps = 18/103 (17%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD P N IS + GG NE +HF + +K
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSPLANGNISVQILGG---------NEQ--HHFEVQRSK 413
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD-KGTPPRE 114
+ P I V LDRE P YNLT+ D G PP E
Sbjct: 414 V-PNLSL----IKVASALDRERIP-SYNLTVSVSDNHGAPPAE 450
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G N+ + YS+ G + G F+
Sbjct: 1310 NTPCFPKSTLFVDVLENMRIGELVSSVTATDSD-SGDNADLHYSITGSNNHGTFS----- 1363
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1364 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1401
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y+ + E+ GT ++ + AAD D G N ++ Y + G F +D+
Sbjct: 2149 NNPVFAQALYKVEINEDTLTGTDILQVFAADGD-EGTNGQVRYGIVDGSTNQEFRMDSVT 2207
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I V+K LDRE Y LT++A D+G+ PR
Sbjct: 2208 GV--------------------ITVVKPLDREKTAT-YLLTVQAADRGSTPR 2238
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y+ T+ E++P+ + ++A+D D G N +I+Y++ G+ F I +G
Sbjct: 991 NPPVFDQLSYEVTLSESEPVNSRFFKVQASDED-SGANGEIAYTIAEGNAGDAFGIFPDG 1049
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D + + +VV DR + PL + + +
Sbjct: 1050 QL----YIKSELDRELQDRYVLVVVAS--DRAVEPLSATVNVTVI 1088
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G VI A D+D G++ + SY + G+ G F +D
Sbjct: 131 NAPVFPDPTITVTFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIIRGNEAGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P R Y
Sbjct: 189 -----------ITLNPSGEGAFLHLVSKGGLDREVTP-HYQLLVEVEDKGEPKRRGY 233
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF Y TV EN P GT VI L A D D G N+ I+Y+V+ D F ID
Sbjct: 3189 NSPVFVPDEYFPTVLENAPSGTTVIHLNATDND-SGTNAVIAYTVQSSDS-DLFVID 3243
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A ++EN+P G+ + T+ A D D G N + YS+ GD
Sbjct: 684 NSPVFYPVQYFAHIQENEPGGSYITTVSATDPD-LGPNGTVKYSISAGD 731
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 22/109 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQAT+ E T V+ + A+D D G N I YSV G+ F I
Sbjct: 1205 NAPKFLKDFYQATISETAANLTQVLRVSASDVD-EGNNGLIHYSVIKGNEERQFAI---- 1259
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGT 110
G+ + + ++ LD E P Y L ++AVD GT
Sbjct: 1260 --------------GSTSGQ--VTLIGKLDYEATP-AYFLVIQAVDSGT 1291
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 4 PVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
PVFS Y+ +V EN P GT ++ L A D D G N + +S++ + E
Sbjct: 579 PVFSQPEGYKVSVVENAPTGTELLVLGATDGD-LGDNGTVRFSLQ----------EAESD 627
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
FR +DP + + + + LDRE Y+L + A D GTPP+ +
Sbjct: 628 QRSFR-----LDPVSGR----LSTISSLDREEQAF-YSLLVLATDLGTPPQSS 670
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS T+ E+ IG +V T+ A D D MN I+Y++ G+ G F I++
Sbjct: 3084 HTPEFSQSHMSTTIPESHSIGAIVRTVSARDRD-AAMNGLITYTISAGNEEGIFAINSST 3142
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ + + K LD E+ + +T+ A D G R Y
Sbjct: 3143 GV--------------------LTLAKALDYELCQ-KHEITISATDGGWVARTGY 3176
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP F Y V +N +GT +I + A D G+NS++ Y + + LG F +DN+
Sbjct: 2978 NAPQFLRDKYFTPVTKNVKVGTKLIKVTAVDDKDFGLNSELEYFISNENYLGKFKLDND 3036
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVFS Y V EN +G V ++ A+ D ++S ISY + GD G F I+
Sbjct: 788 NPPVFSQVAYSFVVFENVALGYHVGSVSASTMD---LHSNISYLITTGDQKGMFAIN 841
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 37/86 (43%), Gaps = 15/86 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTL--VITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
P F Y V EN +GTL I A D G NSK+SY +RGG+ FT+ G
Sbjct: 2256 PTFELSPYLVNVPEN--LGTLPKTILQVVARDDDQGSNSKLSYVLRGGNEDQAFTLSASG 2313
Query: 62 PL-----------NHFRIVPTKIDPG 76
L HF +V T D G
Sbjct: 2314 ELRVTQSLDRETKEHFVLVITATDSG 2339
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF + TV+EN G+ ++ L A DAD G N+ ++Y++ G F ID E
Sbjct: 1735 NPPVFPTDMLDLTVEENIGDGSKIMQLTAMDAD-EGANALVTYAIISG-ADDSFRIDPES 1792
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
++ TK ++ +Y+++V + + + N+T+ V+ TP
Sbjct: 1793 G----DLIATKRLDRERRSKYSLLVRADDGLQSSDMRINITISDVNDHTP 1838
Score = 35.0 bits (79), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 23/99 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL-NHFRIVPTK 72
++ EN PIGT VI++ A D D +N ++SY TI + P NHF I K
Sbjct: 1427 SIVENIPIGTSVISVTAHDPD-ADINGQLSY-----------TIVQQMPRGNHFTIDEVK 1474
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
GT I +DRE A L + LT++A D+ P
Sbjct: 1475 ---GT------IYTNAEIDREFANL-FELTVKANDQAVP 1503
>gi|427798291|gb|JAA64597.1| Putative cadherin egf lag seven-pass g-type receptor, partial
[Rhipicephalus pulchellus]
Length = 3724
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/61 (49%), Positives = 40/61 (65%), Gaps = 6/61 (9%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++AP F++ V ATV ENQP GT V TL A D + I+Y++ GG+GLG FTID+
Sbjct: 1003 LHAPSFAEQVSSATVDENQPPGTSVTTLAATDEE------DITYTITGGNGLGMFTIDSN 1056
Query: 61 G 61
G
Sbjct: 1057 G 1057
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 23/118 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+APVF + + EN+P+GT + T+ A D D N +SYS
Sbjct: 450 HAPVFDPMPVEVLLDENRPVGTKIFTVHAHDED-EAENGYVSYS---------------- 492
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP-PRETYKA 118
L + VP +DP + + I ++LD E Y L +RA D G+P R+T KA
Sbjct: 493 -LVNLNAVPFSVDPFSGE----ISTTEVLDYETMRHSYMLRIRATDWGSPYQRQTEKA 545
Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 24/111 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y+ + E+ P G LV + A D D G+N ++SYS D G+F+ID
Sbjct: 3014 NPPVFGQKAYELALPEDTPAGRLVAHVHALDRD-LGVNRRLSYSFVQAD--GHFSIDAHS 3070
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L + + + LDRE +NLT++A D G PP
Sbjct: 3071 GL--------------------VRLEQPLDREQCAR-FNLTVQAQDHGQPP 3100
Score = 42.7 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 21/109 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y A V E P+G+ + A + G+N++I+Y++ G+ +G+F+I+
Sbjct: 3119 PEFTQQMYAAAVSEVAPVGSPISAAIKATSRDVGVNAQITYALVAGNDMGHFSIE----- 3173
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K + V + LD E P Y L + A D G PP
Sbjct: 3174 ---------------PKTGVLRVARPLDYEETP-SYQLAVEARDGGEPP 3206
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 26/111 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y ++E+ PIG LV ++ A DAD G N ++ YS +D E
Sbjct: 901 NAPHFARAPYVVRIREDLPIGALVTSVHAEDAD-FGDNGRVQYS-----------LDTEN 948
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+DP T + + +LD E L YN+T++A D G PP
Sbjct: 949 ---------FDVDPDTGL----VRLAAMLDFETWRL-YNVTVQAHDCGDPP 985
Score = 38.5 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 13/74 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL---GYFTID 58
N PVFS+ +YQ V E+ GT ++ L A DAD + ++ YS+ + + YF +D
Sbjct: 1398 NWPVFSESLYQVEVSESSSPGTEILQLTATDADE---DQRLFYSIHNSEQVTSNSYFVLD 1454
Query: 59 NEG-------PLNH 65
++ PL+H
Sbjct: 1455 SDTGVLSLALPLDH 1468
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 51/111 (45%), Gaps = 28/111 (25%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF Y ATV E+ G LV+ ++A+DAD G +R +T+ + G
Sbjct: 3223 NAPVFGG-PYSATVTEDASPGQLVLQVQASDADSGG-------ELR-------YTLLHPG 3267
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P + +DP T + + V LDRE Y L + D GTPP
Sbjct: 3268 PFS--------LDPATGQ----LSVAGPLDRETVSR-YVLEVECWDGGTPP 3305
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 12/101 (11%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN-- 59
++P FS VY+A V EN G V L A D D G+ +++Y++R D +F I++
Sbjct: 2413 HSPRFSQSVYEAVVAENMLPGARVARLSATDPD-QGVLGRLTYAIRSRDCALHFHINSTT 2471
Query: 60 -----EGPLN----HFRIVPTKIDPGTKKKEYNIVVLKLLD 91
+ PL+ H VP G + + +V + + D
Sbjct: 2472 GELVTQEPLDHEHRHLYEVPVSATDGGGRLAFAVVRVAVTD 2512
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 24/105 (22%)
Query: 12 QATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NEGPLNHFRIVP 70
+ V E+ P+G+++ ++A D D G N ++ Y + GD F +D + G L
Sbjct: 704 ELAVNESTPLGSVLGYIQAKDPDH-GYNGRLVYVISSGDQHSCFRVDMHTGAL------- 755
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+++ LD E+AP + L + A D+G PPR T
Sbjct: 756 --------------LLVAALDYELAP-SHLLNVTAYDQGQPPRST 785
Score = 36.6 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F Y+ V E GT ++ L A D D G N+ +++S+ G+ F++D+
Sbjct: 1505 HAPEFLQARYEVRVSETAAPGTALLQLGALDRD-RGPNALLTFSIASGNMGSLFSLDSTL 1563
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L + + + L R+ P + LT+RAVD G PP
Sbjct: 1564 GL--------------------LTLSRELSRQTEP-EFFLTVRAVDHGEPP 1593
Score = 35.4 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 25/115 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F + Y + + + G LV +KA D D G N ++ YS+ GD F +D +
Sbjct: 2017 NAPIFVNRPYYSVITVSAQPGDLVFKVKAIDLD-DGPNGQVLYSLHEGDS-HLFDVDKDS 2074
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
R+V + PG P + L L A D+G PP E++
Sbjct: 2075 --GEIRLVRS---PGR------------------PDEHALVLVARDQGNPPLESH 2106
Score = 35.4 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAP+F Y + E+ P GT V L+AADAD G N+++ +
Sbjct: 799 NAPLFEKPAYSFVINEDAPNGTSVARLRAADAD-QGRNAELHF 840
>gi|432847518|ref|XP_004066062.1| PREDICTED: protocadherin Fat 1-like [Oryzias latipes]
Length = 4558
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 58/122 (47%), Gaps = 30/122 (24%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y+ TV EN PIGT VIT+KA D D RG +G ++I N
Sbjct: 457 NAPEFQQTSYKVTVDENVPIGTSVITVKATDLD------------RGENGYVTYSITNLS 504
Query: 62 P----LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
P +++F V I ++LD E+ P YNL +RA D G+P R +
Sbjct: 505 PQPFVIDYFSGV--------------ITTSEVLDYELMPRIYNLKVRASDWGSPFRREVE 550
Query: 118 AT 119
++
Sbjct: 551 SS 552
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 22/113 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F FV + +KE+ +GT V+ + A D D G + ++ YS+R G GLG FTI+ E +
Sbjct: 1030 PQFRSFVERGFIKEDALVGTSVMKVSAEDEDT-GRDGEVRYSIRDGSGLGIFTIEEETGV 1088
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
I +LLD E P Y LT+ A+D+G P +
Sbjct: 1089 --------------------IRTQELLDHEATP-HYWLTVYAMDRGVVPLSAF 1120
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 17 ENQPIGTLV-ITLKAADADPPGMNSKISYSVRGGDG-LGYFTIDNEGPLNHFRIVPTKID 74
E+ P+ T V + AD DP + +G +G + +I PL F+ V T
Sbjct: 250 EHAPVITAVTLAPSGADHDPTYAIVTVEDKDQGPNGEIASLSIVAGDPLQQFKAVRTS-- 307
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
PG+K EY I +K +D + P GYNLTL+A DKGTPP+
Sbjct: 308 PGSK--EYKINAVKDVDWDNQPFGYNLTLQAKDKGTPPQ 344
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 52/114 (45%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y V E+ IGT V+ + A D D G N+++ YS+ G+ F ID+
Sbjct: 1237 NAPWFIGIPYSGRVFESAAIGTAVLQVTALDKD-TGHNAEVVYSIESGNVANCFAIDS-- 1293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
++ T + V K LDR + + L L+A D GTPP T
Sbjct: 1294 ------VLGT------------VTVAKELDRS-SRTAFELVLKATDNGTPPLST 1328
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 52/114 (45%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y V E+ IGT V+ + A D D G N+++ YS+ G+ F ID+
Sbjct: 1486 NAPWFIGIPYSGRVFESAAIGTAVLQVTALDKD-TGHNAEVIYSIESGNVANCFAIDS-- 1542
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
++ T + V K LDR + + L L+A D GTPP T
Sbjct: 1543 ------VLGT------------VTVAKELDRS-SRTAFELVLKATDNGTPPLST 1577
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ +G ++ ++AA D N++ISYS+ G+ G F++D
Sbjct: 3155 NPPVFEHREYTATVPEDVAVGAQLLRVQAASRDKEA-NAEISYSIISGNEHGMFSVD--- 3210
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ +I V++ LD E + Y +T+ A D G+PP
Sbjct: 3211 -----------------ARSGDIFVIEPLDYETSH-EYYITIEATDGGSPP 3243
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 51/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS VY A + E+ +G V+ + A D D P + + YS+ G+ FTID
Sbjct: 3260 NRPVFSQDVYAAVISEDVELGKTVLAVMAEDFDGPSYD-HVQYSIVDGNQGSPFTID--- 3315
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PL G K V + LDRE GY LT+ A D G PP
Sbjct: 3316 PLR-----------GELK------VARQLDRERTS-GYTLTVVASDNGVPP 3348
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 53/111 (47%), Gaps = 25/111 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
N P+F+ Y TV EN GT V L A DAD G+NS I YS + D G F++D
Sbjct: 3051 NPPLFALDPYTITVFENTETGTFVAKLLANDAD-AGLNSDILYSLINSAD--GSFSVDEN 3107
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ I + + LDRE+ + Y LT +A+D+G+P
Sbjct: 3108 SGV--------------------ISLERPLDREVQSV-YELTAQAIDRGSP 3137
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 50/116 (43%), Gaps = 23/116 (19%)
Query: 3 APVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+P F+D F VKE+ P+G ++ L A D+D G N K+ Y + GGD F +D E
Sbjct: 711 SPQFTDSFPSVIEVKEDLPVGARIVHLSATDSD-SGFNGKLVYVISGGDKENRFIVDMET 769
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
++V LDRE A Y L + D G P + + +
Sbjct: 770 GW--------------------LLVYSALDRE-ATDHYTLNITVYDLGVPQKSSSR 804
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 20/107 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVIT-LKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F+ +Y+ TV E+ P + VI L D D N +++Y + GGD LG F I++
Sbjct: 2843 NPPRFTAEIYKGTVSEDDPPPSGVIAILSTTDDDSEDFNKQVNYFITGGDPLGQFAIEH- 2901
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE+ Y L + A D
Sbjct: 2902 -----------------VQNEWKVSVRKPLDREVMD-NYLLNITASD 2930
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP+F++F+Y TV E P G VI ++A+D D K+ +++ G+ F I+ +
Sbjct: 2314 NAPMFTEFIYNTTVSELAPRGHFVIQVQASDPDSSDTK-KLEFAIISGNDEQNFAINKQ 2371
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 25/102 (24%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN-EGPLNHFRIV 69
Y+ V+E+ PIGT+++ L+A D D G +S++ YS+ +G G F +D G L RIV
Sbjct: 930 YRIKVREDLPIGTVIMWLEAHDPD-IGPSSQVRYSLT-DNGDGKFEVDKLSGAL---RIV 984
Query: 70 PTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
LD E + YNLT +A DKG P
Sbjct: 985 QN------------------LDYETKQV-YNLTAKAKDKGKP 1007
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N PV +Y +V E+ P G L++ + A DAD N++IS+ ++G G F ID++
Sbjct: 2949 NDPVCEQLLYSESVPEDSPAGRLILQVSATDADIRS-NAQISFELQGV-GAELFIIDSD 3005
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F + Y A V+ + G LV + A D D G N+ I Y ++ + G F I G
Sbjct: 2005 NNPMFVNLPYHALVQMDAEEGQLVRQVTAVDKD-VGSNADIHYYLK--EHQGSFEITRSG 2061
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLT--LRAVDKGTPPRE 114
+ ++ K D + K++ IVV+ + EI PL + +R V+K P E
Sbjct: 2062 EI----LLKKKFDKDSLNKDFVIVVVAQDNGEI-PLSAEVEVPVRVVNKAIPIFE 2111
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y ++EN+P GT V+ L +D D ++++ G+ F I+ +G
Sbjct: 3365 NPPLFSQANYSLIIQENRPKGTSVLQLTVSDQDASHNGPPFTFTIVDGNEGSAFLINQQG 3424
Query: 62 PL 63
L
Sbjct: 3425 AL 3426
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 46/112 (41%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N PVF Y A + E IGT V+ ++A D+D G N +I Y + G YF ID
Sbjct: 2207 NTPVFLSRSYYANISEASVIGTSVLQVEAKDSD-TGNNQEIFYQLVDEKGKSSNYFIIDR 2265
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ + I + ++LD E + L R VD G P
Sbjct: 2266 DKGI--------------------ISLAQVLDHEDIQ-QHKLRARVVDGGVP 2296
Score = 35.0 bits (79), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 46/119 (38%), Gaps = 24/119 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F Y V E+ PI T +I + A D D G N I YS+ GG
Sbjct: 816 NSPQFLQDSYTVEVSESTPIQTEIIQVDATDKD-QGNNGIIKYSILGG------------ 862
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
+HF I + + V + LDRE P Y L + A D+ + P
Sbjct: 863 -TDHFEI---------NELTGVVTVRRPLDRERFPF-YTLKIAARDQAVSEPQLVSTVP 910
Score = 35.0 bits (79), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S+ VY +V EN P +I + A D D + K++Y + G+ G+F I+ +
Sbjct: 1133 NAPQTSEPVYYPSVTENSPKDVSIIQINAVDPDVIASD-KLTYKITSGNPQGFFAINTKT 1191
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNL 101
L ++D +++ + +L++ D++I P+ NL
Sbjct: 1192 GL--ITTTSRRLD----REQQDEHILEVRDQDI-PVKRNL 1224
>gi|38146383|gb|AAR11564.1| fat3-like [Gallus gallus]
Length = 138
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F+ID E
Sbjct: 37 LYTPYFPDFAVIGSVKENSRIGTSVLQVVARDEDS-GRDGEIQYSIRDGSGLGRFSIDEE 95
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I +LDRE Y LT+ A D G P
Sbjct: 96 TGV--------------------IYTADVLDRETTK-SYWLTVYATDHGVVP 126
>gi|229442257|gb|AAI72771.1| FAT tumor suppressor 1 precursor [synthetic construct]
Length = 1094
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVFS FV + TVKE+ P+G+LV+T+ A D D + +I YS+R G G+G F I E
Sbjct: 1029 LHPPVFSSFVEKGTVKEDAPVGSLVMTVSAHDEDAR-RDGEIRYSIRDGSGVGVFKIGEE 1087
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A EN PIGT V++L A D D G N ++YS+
Sbjct: 459 NPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPD-EGENGYVTYSI--------------A 503
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
LNH VP ID T + + LD E+ P Y L +RA D G P R
Sbjct: 504 NLNH---VPFAIDHFTGA----VSTSENLDYELMPRVYTLRIRASDWGLPYR 548
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKENQP+G+ VI + + D D G N K+ Y+V GG+ F ID E +
Sbjct: 726 VKENQPVGSSVIFMNSTDLD-TGFNGKLVYAVSGGNEDSCFMIDMETGM----------- 773
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ +L LDRE Y L + D G P + ++
Sbjct: 774 ---------LKILSPLDRETTD-KYTLNITVYDLGIPQKAAWR 806
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 10 VYQATVKENQPIGTLV-ITLKAADADPPGMNSKISYSVRGGDG-LGYFTIDNEGPLNHFR 67
V+ E P+ T V ++ D DP + +G +G + +I L FR
Sbjct: 245 VHIEQANECAPVITAVTLSPSELDRDPAYAIVTVDDCDQGANGDIASLSIVAGDLLQQFR 304
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
V + PG+K EY + + +D + P GYNLTL+A DKGTPP+
Sbjct: 305 TVRSF--PGSK--EYKVKAIGGIDWDSHPFGYNLTLQAKDKGTPPQ 346
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ V+E+ P GT+++ L+A D D G + ++ YS+ G G F +D
Sbjct: 923 NPPTFIPPNYRVKVREDLPEGTVIMWLEAHDPD-LGQSGQVRYSLL-DHGEGNFDVD--- 977
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT+RA DKG P
Sbjct: 978 -----------------KLSGAVRIVQQLDFEKKQV-YNLTVRAKDKGKP 1009
>gi|72679460|gb|AAI00555.1| Fat1 protein [Mus musculus]
Length = 1309
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/112 (38%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVFS Y V E+ + VIT+ A DAD P NS I YS+ G+ FTID
Sbjct: 41 NSPVFSQDTYTTVVSEDAALEQPVITIMADDADGPS-NSHIHYSIIEGNQGSPFTID--- 96
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P + + + V K LDRE GY LT++A D G PPR
Sbjct: 97 --------PVRGE---------VKVTKPLDRETIS-GYTLTVQAADNGNPPR 130
Score = 36.2 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 30/62 (48%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS Y ++EN+P+G V+ L D D +++ G+ F ++ G
Sbjct: 146 NAPLFSRDNYSVIIQENKPVGFSVLKLVVTDKDSSHNGPPFFFTIVSGNDENAFEVNQHG 205
Query: 62 PL 63
L
Sbjct: 206 VL 207
>gi|449269582|gb|EMC80343.1| Protocadherin Fat 3 [Columba livia]
Length = 4549
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F+ID E +
Sbjct: 1042 PYFPDFAVIGSVKENSRIGTSVLQVVARDEDS-GRDGEIQYSIRDGSGLGRFSIDEETGV 1100
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I +LDRE Y LT+ A D G P T
Sbjct: 1101 --------------------IYTADILDRETTK-SYWLTVYATDHGVVPLYT 1131
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS VY A + E+ +G VI L A D D P N +I +S+ GD DNE
Sbjct: 3338 NAPKFSQAVYSAVISEDAAVGDSVIMLIAEDLDSPP-NGQIHFSIVNGDQ------DNE- 3389
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+DPG + V K LDRE GY+L ++A D GTPP
Sbjct: 3390 ---------FSVDPGLGL----VKVKKKLDRERIS-GYSLVIQARDSGTPP 3426
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF VY+ +VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 2921 NAPVFEHEVYRGSVKESDPPGEVVAVLSTWDEDTSDVNRQVSYHITGGNPKGKFAL---- 2976
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE L Y L + A D
Sbjct: 2977 --------------GLVQNEWKVYVKRPLDREEQDL-YYLNITATD 3007
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+PVFS VY A V+EN GT VI +KA D D G+ +ISYS+ F ID+ G
Sbjct: 2494 SPVFSQSVYVAEVRENATPGTKVIHVKATDGD-SGVYGQISYSIINDFAKDRFLIDSNGQ 2552
Query: 63 L 63
+
Sbjct: 2553 I 2553
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 51/117 (43%), Gaps = 25/117 (21%)
Query: 3 APVFS-DFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
AP F F V E+ P+G ++ +KA DAD G N ++ Y++ G+ F ID E
Sbjct: 723 APHFDKSFPTDVKVSEDLPVGATILRIKAYDAD-SGFNGRVLYTISDGNVDSCFNIDMET 781
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
G LN VL LDRE L Y L + D G PP+ ++
Sbjct: 782 GVLN---------------------VLMPLDREKTDL-YLLNITIYDLGNPPKSAWR 816
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 49/113 (43%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F Y + V E+ P+G+ V+ + A D D G N I+YSV + L FTI
Sbjct: 469 HTPEFQQASYSSFVNESVPVGSSVLAVSAVDKD-RGENGYITYSVASLNSLP-FTI---- 522
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
N F V I + LD E +P Y +RA D G+P R
Sbjct: 523 --NQFTGV--------------ISTSEELDFESSPESYRFIVRASDWGSPYRH 559
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 25/109 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A V EN L+ ++A D D G+N K++Y++ GYF++D
Sbjct: 3128 NPPVFSSDHYTACVYENTATKALLTRVQATDPD-VGVNRKVTYTL-ADSADGYFSVD--- 3182
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKL-LDREIAPLGYNLTLRAVDKG 109
+ I++L+ LDRE+ YN++++A D+
Sbjct: 3183 ------------------RSSGIIILEHPLDRELQS-SYNISVKASDQS 3212
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D++
Sbjct: 2391 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYSILSGNDRTSFIMDSKS 2449
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL----GYFTI 57
N PVF Y A + E PIGT ++ +KA DAD N +++Y++ L FTI
Sbjct: 2811 NKPVFETASYDAIIMEGMPIGTKLMQVKAVDADSSA-NGQVTYTLAVESELEKITEAFTI 2869
Query: 58 D-NEGPLNHFRIVPTKIDPG 76
D N G ++ + + + DP
Sbjct: 2870 DSNSGWISTLKDLDHEKDPA 2889
Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ Y A ++EN+P+GT ++ L D D ++++ G+ FT+D G
Sbjct: 3443 NGPIFTPANYTAVIQENKPVGTSILQLVVTDKDSFHNGPPFTFTILTGNEEEEFTLDPHG 3502
Query: 62 PL 63
L
Sbjct: 3503 VL 3504
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP+ S+ +Y TV EN P VI ++A D D N K++Y + G+ +F I+
Sbjct: 1145 NAPLTSEPIYYPTVMENSPKDVSVIQIQAQDPD-SSTNEKLTYRITSGNPQNFFVIN 1200
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 36/78 (46%), Gaps = 16/78 (20%)
Query: 37 GMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIA 95
G N +I S S+ GD L F + EG EY I K +D +
Sbjct: 293 GANGEIESVSIVAGDPLEQFFLTKEGKW---------------MNEYKIKERKPIDWDNF 337
Query: 96 PLGYNLTLRAVDKGTPPR 113
P GYNLTL+A DKG+P +
Sbjct: 338 PYGYNLTLQAKDKGSPQK 355
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 57/111 (51%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F+ +Y+A+V E+ +G+ V+ + A D D G NS++ Y++ G N G
Sbjct: 1563 HSPYFTSPLYEASVFESAAVGSAVLQVTALDKD-KGENSELIYTIEAG---------NTG 1612
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F+I P + T +KE ++ + + L+++ D+G+PP
Sbjct: 1613 --NSFKIEPV-LGIITLQKEPDLTTMG---------QFVLSVKVTDQGSPP 1651
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 47/113 (41%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG--DGLGYFTIDN 59
N P+F Y AT+ E IGT V+ + A DAD N + Y + + YF ID+
Sbjct: 2284 NPPLFDQSSYNATLSEASLIGTPVLQVVALDADSDN-NKLVQYQIVQDTFNSTDYFHIDS 2342
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L I+ ++LD E+ +L +RA D G PP
Sbjct: 2343 SSGL--------------------ILTARMLDHELIQ-QCSLKVRATDNGFPP 2374
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 42/108 (38%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PV Y A E+ P +++ + A DAD G N +I YS+ G +F G
Sbjct: 3026 NNPVCEQVAYTALFPEDIPSNKVILKISAKDAD-IGSNGEIRYSLFGAGNNKFFLDPENG 3084
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
L L LDRE P+ YNL RA D G
Sbjct: 3085 ELKS---------------------LAPLDREKIPV-YNLVARATDGG 3110
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F ID
Sbjct: 934 SPAFIPSSYNVKVLEDLPVGTVIAWLETHDPD-LGLGGQVRYSLV-NDYNGRFEID---- 987
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 988 ----------------KASGAIRLNKELDYEKQQF-YNLTVRAKDKGRP 1019
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 48/110 (43%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ GT V+++ A D G N++I+Y +R G+ G F I++
Sbjct: 3233 NPPVFERRDYLVTVPEDTSPGTEVLSVFATSQDI-GTNAEIAYLIRSGNEKGKFRINS-- 3289
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + + LD E Y L + A D GTP
Sbjct: 3290 ------------------KTGAISIFEALDYESCKDFY-LVVEAKDGGTP 3320
>gi|449269882|gb|EMC80622.1| Protocadherin Fat 1 [Columba livia]
Length = 4590
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 56/112 (50%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A + E+ + VIT+ A DAD P N+ I Y++ G+ FTID
Sbjct: 3332 NTPVFSQDTYTAVISEDAILEQSVITVMADDADGPS-NNCIHYTIIDGNQGNPFTID--- 3387
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
PT+ + I V KLLDRE GY LT++A D G PPR
Sbjct: 3388 --------PTRGE---------IKVTKLLDREKIS-GYTLTVQASDNGNPPR 3421
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P FS F + +KE+ P+G+ V+T+ A D D G + +I YS+R G G+G F ID E
Sbjct: 1030 LHPPRFSIFADKGFIKEDAPVGSSVMTVSAYDED-EGRDGEIRYSIRDGSGIGVFRIDEE 1088
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE Y LT+ A D+G P ++
Sbjct: 1089 KGI--------------------IETADRLDRETTS-HYWLTVYATDQGVVPLSSF 1123
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ +Y+ TV E+ P G ++ L DAD N ++SY + GGD LG F I+N
Sbjct: 2915 NPPRFTAEIYKGTVSEDDPPGGVIAILSTTDADTEEANRQVSYYITGGDPLGQFAIEN-- 2972
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE Y L + A D
Sbjct: 2973 ----------------IQNEWKVYVKKPLDRE-EKDNYLLNITATD 3001
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 10 VYQATVKENQPIGTLV-ITLKAADADPPGMNSKISYSVRGGDG-LGYFTIDNEGPLNHFR 67
V+ E+ P+ T V +T +D DP + + +G +G + I PL FR
Sbjct: 246 VHVEQANEHAPVITAVTLTPSESDKDPTYAIVTVEDNDQGSNGEIASLNIVAGDPLQQFR 305
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
V + PG KEY I + +D E P GYNLTL+A DKG PP+
Sbjct: 306 TVRSV--PG--GKEYRIKAMGHIDWESHPFGYNLTLQAKDKGNPPQ 347
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 53/113 (46%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A+ EN PIGT V+ + A D D G N ++YS+ + L +
Sbjct: 460 NPPEFTQTSYKASFDENVPIGTSVMRVSARDPD-EGENGYVTYSIANLNPLPFV------ 512
Query: 62 PLNHFR-IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+NHF I+ T D LD E+ P YNL +RA D G P R
Sbjct: 513 -INHFSGIISTSED---------------LDYELMPRVYNLRIRASDWGIPYR 549
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 53/112 (47%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y TV EN TL+ ++A DAD GMN KI YS+ G F+ID
Sbjct: 3122 NAPEFTADPYSITVFENTEPKTLLTRVQATDAD-AGMNRKIHYSLVNS-AEGQFSIDEFS 3179
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I + K LDRE+ + Y LTL+A D+G P R
Sbjct: 3180 GI--------------------IRLEKPLDRELQAV-YTLTLKATDEGLPRR 3210
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y A+V E+ +GT V+ + AA D N++I+YS+ G+ G F+ID+
Sbjct: 3227 NPPVFEHREYSASVSEDVLVGTEVLQIYAASRDIEA-NAEITYSIVSGNEHGKFSIDSTT 3285
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I +++ LD E + Y LT+ A D GTP
Sbjct: 3286 GA--------------------IFIIESLDYE-SSHEYYLTVEATDGGTP 3314
Score = 43.1 bits (100), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 23/118 (19%)
Query: 1 MNAPVFSDFV-YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
M+AP F + + V+E+QP+G+ +I + A D D G N K+ Y + GG+ F +D
Sbjct: 712 MHAPQFRNTLPSSIEVREDQPVGSSIILMSAIDLD-TGFNGKLVYVISGGNEDSSFIVDM 770
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
E + + +L LDRE+ Y L + D G P + +
Sbjct: 771 ERGV--------------------LKILSPLDREVKD-KYTLNITVYDLGVPQKSAWH 807
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDNE 60
+AP F+ Y+ V E+ +G+ V+ + A D D G N++I YS+ G+ G +F
Sbjct: 1559 HAPWFTSSSYEGRVYESAAVGSAVLQVTALDKD-KGKNAEIVYSIESGNIGNSFF----- 1612
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
IDP I + K LDR Y+L ++A DKG PP
Sbjct: 1613 ------------IDPVLGM----IKIAKELDRS-KQEEYSLMVKATDKGDPP 1647
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 49/113 (43%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N PVF++ Y AT+ E IGT V+ + A DAD G N ISY + + YF ID+
Sbjct: 2280 NPPVFTEQSYTATLSEASVIGTSVVQVSATDAD-SGTNRGISYHLVEDNSESHDYFHIDS 2338
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L I+ + LD E + L +RA+D G P
Sbjct: 2339 STGL--------------------ILTARTLDYEQIK-QHKLLVRAIDGGMLP 2370
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 16/103 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTID 58
N PV Y+A + EN P GT VI +K D D G+N +++YS+ + D + FTI+
Sbjct: 2806 NQPVLESNPYEAFIVENMPAGTRVIQVKGTDLD-SGLNGQVTYSLDPSQELDTIESFTIN 2864
Query: 59 NE-------GPLNH-----FRIVPTKIDPGTKKKEYNIVVLKL 89
E L+H +RI D G K + ++ V+++
Sbjct: 2865 METGWITTLKELDHEKRDKYRITVIASDRGEKIQLSSLAVVEV 2907
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P+F+ +Y+A + E P G V ++A+DAD ++ K+ YS+ G+ F I+++
Sbjct: 2387 NPPLFNQLLYEAKISELAPRGHFVTCVQASDADSSDVD-KLEYSILTGNDQKNFVINSK 2444
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F + Y A VK + +G ++ + A D D G N ++ Y ++ + +F ID G
Sbjct: 2078 NAPFFVNLPYYAVVKVDSEVGHVIRRVTAVDKD-TGRNGEVHYYLK--EHQEHFQIDPTG 2134
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVL 87
++ + K +P T KEY + V+
Sbjct: 2135 EIS----LKKKFEPDTVNKEYLVTVV 2156
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y ++E+ P GT+++ L+A D D G +S++ YS+ G F +D
Sbjct: 924 NPPKFIPSNYHVKIREDLPEGTIIMWLEAYDPD-LGQSSQVRYSLLDS-GDSTFDVD--- 978
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I +++ LD E YNLT+RA DKG P
Sbjct: 979 -----------------KLSGAIRIVQRLDYEKKQF-YNLTVRAKDKGKP 1010
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
M++PVFS Y+ + EN P+ TLV +KA D D G I+Y + F +
Sbjct: 2488 MHSPVFSQNEYEVELAENAPMRTLVTQVKATDED-SGTYGHITYHIVNDFAKDRFYTNER 2546
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
G + K+D T+ ++ ++ + L+ ++
Sbjct: 2547 GQI----FTSEKLDRETQAEK--VIAISLMAKD 2573
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 44/111 (39%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y ++EN+PIG V+ L D D +++ G+ F I+ +G
Sbjct: 3437 NPPVFSKGNYSVIIQENKPIGFSVLQLVVTDKDSSHNGPPFLFTILSGNEENTFQINQQG 3496
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L L+R++ Y L ++A D G PP
Sbjct: 3497 VL---------------------TTTAALNRKVRD-HYLLHVKATDNGKPP 3525
Score = 35.0 bits (79), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP ++ VY V EN P VI ++A D D + K++Y + G+ G+F+I+
Sbjct: 1136 NAPQTTEPVYYPEVMENSPKDVSVIQIEAFDPDSSS-SEKLTYKITSGNPQGFFSIN 1191
>gi|383864925|ref|XP_003707928.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-related tumor
suppressor-like [Megachile rotundata]
Length = 5000
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 56/113 (49%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQ--PIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D Y A V EN P G VI +KA DAD P N ++ Y ++
Sbjct: 2285 NAPVFLDSPYLAHVMENMVPPGGGFVIQVKAYDADTPPYNDQVRYFLK------------ 2332
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
EG + FRI + D I +L+ LDRE P Y LTL A+D G+PP
Sbjct: 2333 EGDTDLFRINASTGD---------IFLLRPLDRESVP-EYTLTLVAMDTGSPP 2375
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 55/110 (50%), Gaps = 21/110 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y ATV E GT V+T++A D D N++ SYS+ GG+ F
Sbjct: 3419 PEFLQSNYDATVSEGAAHGTRVLTVRAVDKDIKPQNNQFSYSIIGGNVGQAF-------- 3470
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
K+DP T +I K LDRE P+ Y+LT+ A+D G+PP+
Sbjct: 3471 --------KVDPQTG----DIETAKQLDRESIPV-YDLTIGAIDTGSPPQ 3507
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 53/118 (44%), Gaps = 23/118 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F + A + EN IGT V+++ A D D G N ++ Y+V GGD G F + G
Sbjct: 1967 NAPIFEVGPHAADIVENTTIGTPVLSVTAQDLD-SGDNGRVIYAVAGGDENGDFGVAANG 2025
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
L KLLDRE PL YNL L A D PP +T
Sbjct: 2026 TL---------------------FTRKLLDREQKPL-YNLLLTATDSPRPPARPLSST 2061
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 22/102 (21%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
ATV EN ++V + D D G+N + + +R G+ LG+F +DN
Sbjct: 340 ATVDENAAKDSIVAAVAVIDNDE-GLNGETTVEIRAGNELGHFRLDN------------- 385
Query: 73 IDPGTKKKEYNIVVLK-LLDREIAPLGYNLTLRAVDKGTPPR 113
+ ++IV + LDRE P YNLT+ A DKGTPPR
Sbjct: 386 ------SQSFDIVYVNGRLDREEIP-KYNLTVVATDKGTPPR 420
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF Y A + E P G+ V ++ A DAD G+N++I Y G+ G+F ID +
Sbjct: 436 HEPVFQQSEYSAVLSELSPTGSFVASISATDAD-SGLNARIYYDFDSGNEQGWFAIDQDT 494
Query: 62 PL 63
L
Sbjct: 495 GL 496
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P+F Y ATV EN IG V+ + A D D G N ++ YS+ GD FTI +G
Sbjct: 2176 NSPIFDPRQYSATVAENASIGASVLQVSAMDRD-EGANGRVRYSISMGDDNRDFTISEDG 2234
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
+AP F+ YQ V EN+P+ T ++T+ A D D G N I Y + G+ F +
Sbjct: 3138 HAPTFAADSYQVRVPENEPVNTTILTVSATDDDQHGPNGMIRYKISAGNERNEFFV 3193
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 49/120 (40%), Gaps = 22/120 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ V E GT ++ + DAD G+N + YS+ G+ G+F ID
Sbjct: 1195 NVPQFQRLPYKVQVNEGAATGTQLLKVYTTDAD-EGLNGDVFYSLEEGNERGHFAID--- 1250
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ I + K LDRE + Y LT+ A D G R + T R
Sbjct: 1251 -----------------EATGQISLTKELDRETSD-SYVLTVVAHDAGLETRLSSSTTVR 1292
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F V EN+P GT+V+TL A D D P + +Y + GG T+D
Sbjct: 3523 NGPIFDPPEVIGYVNENEPAGTIVMTLSATDPDLPPNGAPFTYKLVGGRQSDMVTLD--- 3579
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
H ++ T + LDRE+ P +L + D G P
Sbjct: 3580 --KHTGVLKTT---------------RSLDREVMP-QLDLVVEVEDSGIP 3611
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 52/108 (48%), Gaps = 25/108 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
++P F+ Y+ATV EN GT V A D D G+N+KI+Y + G+ FT D+E
Sbjct: 2392 HSPEFNRQEYKATVSENSVSGTWVAKPHATDKD-EGLNAKITYRLL-GENSERFTADSET 2449
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK 108
G + F +VP LDRE + Y+LTL A D
Sbjct: 2450 GEV--FTVVP-------------------LDREQTSV-YHLTLIAQDS 2475
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP+F Y V EN P G+ + + A DAD G NS++SY++
Sbjct: 1861 NAPMFQSSAYSFDVPENVPRGSRIGQVVATDADADGPNSQLSYAL 1905
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 52/118 (44%), Gaps = 29/118 (24%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGY---FTIDN 59
AP FS V + T+ EN P +LV TL A D D G N ++YS Y F +D
Sbjct: 544 APRFSQSVLEVTLSENTPPQSLVATLSAVDND-QGTNGSVAYSFHSSVSRDYPKTFALDG 602
Query: 60 -EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVDKGTPPRET 115
G L TKI LDRE +G Y + + A D+G+PP+ +
Sbjct: 603 LTGQLT------TKIG---------------LDRET--IGEYRILVIAKDQGSPPQSS 637
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 47/114 (41%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF Y+ ++ E+ P+ +L A D D G N ++ YSV G+ F I +G
Sbjct: 982 HTPVFKLTSYETSLLESTPVNDRFFSLTAIDVD-LGRNGRVLYSVTDGNAEDRFGIFPDG 1040
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
L V +LDRE Y L + A D+G P R +
Sbjct: 1041 QL---------------------YVKNVLDREERDY-YALEVTATDQGNPSRSS 1072
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF + Y + E+ P GT V + A DAD N+++ YS+ G G G F +D
Sbjct: 651 NSPVFYPWRYLMPIPEDAPPGTSVGRVTATDADAR-ENAQVRYSLESG-GEGLFAVD 705
>gi|410949641|ref|XP_003981529.1| PREDICTED: protocadherin Fat 2 [Felis catus]
Length = 4376
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 53/109 (48%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F +Y V EN +G +V+T+ A D D P +NS I+YS+ GG+ LG+FTI
Sbjct: 3346 PRFPQDLYTTRVLENAAVGDVVLTVSATDEDGP-VNSAITYSLVGGNQLGHFTI------ 3398
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+ + V K LD E Y+L LRA D G PP
Sbjct: 3399 --------------HPKKGELQVAKALDWEQTS-SYSLRLRATDSGRPP 3432
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ FV+Q V+EN P GT V+ + A D D G++ ++ Y +R G L F+I+ +
Sbjct: 1052 LHPPRFASFVHQGQVQENSPSGTQVMVVAAHD-DDGGLDGELQYFLRAGTSLAAFSINKD 1110
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I L LDRE Y LT+ AVD+G+ P
Sbjct: 1111 TGM--------------------IQTLAPLDRESVSC-YWLTVLAVDRGSIP 1141
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 40/92 (43%), Gaps = 18/92 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y+ +V EN G LV TLK DAD N +++ + GD LG F I G
Sbjct: 2929 NAPRFASEDYRGSVVENSEPGELVATLKTLDADVSEQNRQVTCYITEGDPLGQFGISQVG 2988
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
E+ I K LDRE
Sbjct: 2989 ------------------DEWRIFSRKTLDRE 3002
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP+F+ Y T EN P GT ++T+ A D D G N I+YS+
Sbjct: 478 HAPIFNRSSYDGTFDENIPPGTSILTVTATDRD-HGENGYITYSI--------------- 521
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+ + VP IDP I K +D E+ Y +RA D G+P R+
Sbjct: 522 --SRPKAVPFSIDPYLGI----ISTSKPMDYELMKRIYTFRVRASDWGSPFRQ 568
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P FS VY +V E P T VI L A+D D G N +SY + G D +F I+
Sbjct: 2293 NPPTFSQLVYTTSVSEGLPAQTPVIQLLASDQDS-GQNRDVSYQIVEDGSDISKFFQIN- 2350
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G V ++D T++ +++ +RA+D+G PP
Sbjct: 2351 -GSTGEMSTV-QELDYETQQH------------------FHVKVRAMDRGDPP 2383
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 22/111 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ Y+A+V + GT ++ ++A D D G N+++ YS G+ G+F I+
Sbjct: 1575 LHPPHFTQLYYEASVPDTTAPGTELLQVRAMDGD-RGANAEVRYSFLKGNSEGFFNIN-- 1631
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L + K+D + Y+LT++A D+G+P
Sbjct: 1632 -ALLGIITLAQKLDQANHAR------------------YSLTVKAEDQGSP 1663
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y +V+EN PIG+ V+ L +D D P S+ + G+ F + +G
Sbjct: 3449 NPPRFFQLNYSTSVQENSPIGSKVLQLILSDPDSPENGPPYSFRITKGNDGSAFRVTPDG 3508
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLR 104
L T + + +E+ + +K+ D I PL + ++R
Sbjct: 3509 WL------VTTMGLRKRVQEWYQLQIKVSDSGIPPLSSSTSVR 3545
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P S V+ +V+E+ P+ T V+ L A D D K+++++ GG+ +G+F +
Sbjct: 1158 NPPRMSRPVFYPSVREDAPLHTSVLQLDAWDPDSSS-KGKLTFNITGGNNMGFFVLH--- 1213
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLD 91
PL ++D + K+ +I+ + +LD
Sbjct: 1214 PLTGLLSTARQLD--RENKDEHILEVTVLD 1241
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTID 58
N P+F Y+A + EN P+GT VI + A D D G + ++SY + G + F ID
Sbjct: 2820 NRPIFEADPYKAVLTENMPVGTSVIQVTANDQD-TGNDGQVSYRLPADPGSNIHELFAID 2878
Query: 59 NE 60
+E
Sbjct: 2879 SE 2880
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F YQ TV EN +GT + LKA DAD N ++ Y++
Sbjct: 841 NAPRFPPGGYQITVSENAEVGTTIAELKAKDADSDD-NGRVRYTL 884
>gi|432104085|gb|ELK30915.1| Protocadherin Fat 4 [Myotis davidii]
Length = 2711
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y ++ EN P+G+ V+ DAD G+NS+++YS+ GD LG FT+D G
Sbjct: 1896 NPPIFSSSSYSTSLMENLPLGSTVLVFNVTDADD-GINSQLAYSIASGDSLGQFTVDKNG 1954
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L VLK LDRE YNL ++ D P + +T +
Sbjct: 1955 VL---------------------TVLKALDRESQSF-YNLVVQVHDLPPLPASRFTSTAQ 1992
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +YQ + EN GT +I + AAD D G N ++ Y + G+ F ID+
Sbjct: 2078 NNPVFAQALYQVEMNENTLTGTDIIQVYAADGD-EGTNGQVRYGIVDGNANQEFRIDSVT 2136
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I V K LDRE P+ Y+LT++A D+G+ PR
Sbjct: 2137 GA--------------------ITVAKPLDREKTPV-YSLTVQATDRGSTPR 2167
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ VY+ + E P G+ V + A D D G+N+ + YS+ G+GLG+F I
Sbjct: 473 PVFAQQVYRVNLSEEAPPGSYVSGVSATDGDS-GLNANLRYSIVSGNGLGWFHIS----- 526
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T G LDRE+A L + A D+G P+ +Y
Sbjct: 527 EHSGLVTTGAAGG-------------LDREVAS-QIVLNISARDQGVHPKVSY 565
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N+ I Y ++ +EG
Sbjct: 246 NPPVFGSSHYQAGVPEDAAVGSSVLQVAAADAD-EGTNADIRYRLQ-----------DEG 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P +IDP T I V + LD E A Y+LT++A+D+G P
Sbjct: 294 -------TPFQIDPETGL----ITVREPLDFE-ARRQYSLTVQALDRGVP 331
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ +Y T+ E+ P GT V+ + A+DAD N+ ISY + GG+ FT
Sbjct: 2288 NVPTFASKLYFTTIPEDAPTGTDVLLVNASDAD-TSTNAVISYRIIGGN--SQFT----- 2339
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I+ LLDRE Y L + + D G+P
Sbjct: 2340 -----------INPSTGQ----IITSALLDRETRE-NYTLVVVSSDAGSP 2373
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G N+ + YS+ G + G F+
Sbjct: 1311 NTPSFPKSTLFVDVLENMRIGELVSSVTATDSD-SGDNADLHYSITGTNNHGTFS----- 1364
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1365 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1402
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 42/96 (43%), Gaps = 17/96 (17%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD P N IS + G NE HF + +K
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSPAANGNISVQILAG---------NEQ--RHFEVQSSK 413
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK 108
+ P I V LDRE P YNLT+ D
Sbjct: 414 V-PNLSL----IKVASALDRERIP-SYNLTVSVSDN 443
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A ++EN+P G+ + T+ A D D G+N I YS+ GD
Sbjct: 685 NSPVFYPVQYFAHIQENEPGGSYITTVSATDPD-LGLNGTIKYSISAGD 732
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 51/117 (43%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G VI A DAD G++ SY + G+ G F +D
Sbjct: 131 NAPVFPDPSIIVTFKEDSSSGRQVILDTATDADIGSNGVDHH-SYRIVQGNEEGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P R Y
Sbjct: 189 -----------ITLNPSGEGAFLHLVSEGGLDREVTP-QYQLLVEVKDKGEPKRRGY 233
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y+ T+ E++P+ + ++A D D G N +I+YS+ G+ F I +G
Sbjct: 992 NPPVFDQLSYEVTLSESEPVNSRFFKVQAFDKD-SGANGEIAYSIAEGNIGDAFGIFPDG 1050
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D + + +VV DR + PL + + +
Sbjct: 1051 QL----YIKSELDRELQDRYVLLVVAS--DRAVEPLSATVNVTVI 1089
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQAT+ E+ T V+ + A+D D G N I YSV G+ F ID+
Sbjct: 1206 NAPKFVKDFYQATISESAANLTQVLRVSASDVD-EGNNGLIHYSVVKGNEERQFAIDSTS 1264
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ ++ LD E P Y+L ++AVD G
Sbjct: 1265 G--------------------QVTLIGKLDYEATP-AYSLVIQAVDSG 1291
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 22/113 (19%)
Query: 4 PVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
PVFS Y+ +V EN P GT ++ L+A D D G N + +S++ + E
Sbjct: 580 PVFSQPQGYEVSVVENAPTGTELLVLRATDGD-LGDNGTVRFSLQ----------EAETD 628
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
FR +DP + + + + LDRE Y+L + A D G+PP+ +
Sbjct: 629 QRSFR-----LDPVSGR----LSTISSLDREEQSF-YSLLVLATDLGSPPQSS 671
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVFS Y V EN +G V ++ A+ D +N+ ISY + GD G F I+
Sbjct: 789 NPPVFSQAAYSFVVFENVALGYHVGSVSASTMD---LNANISYLITTGDQKGMFAIN 842
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 15/87 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTL--VITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
P+F Y V EN +GTL I A D G NSK+SY + GG+ FT+ + G
Sbjct: 2185 PIFELSPYSVHVPEN--LGTLPRTILQVVARDDDQGSNSKLSYVLFGGNEDSAFTLSDSG 2242
Query: 62 PL-----------NHFRIVPTKIDPGT 77
L HF ++ T D G+
Sbjct: 2243 ELRVTQSLDRETKEHFVLIVTATDSGS 2269
>gi|224043651|ref|XP_002200195.1| PREDICTED: protocadherin Fat 3 [Taeniopygia guttata]
Length = 4557
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F+ID E +
Sbjct: 1042 PYFPDFAVIGSVKENSRIGTSVLQVVARDEDS-GRDGEIQYSIRDGSGLGRFSIDEETGV 1100
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I +LDRE Y LT+ A D G P T
Sbjct: 1101 --------------------IYTADVLDRETTK-SYWLTVYATDHGVVPLYT 1131
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 53/111 (47%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS VY A + E+ +G V+ L A D D P N +I +S+ GD DNE
Sbjct: 3338 NAPTFSQAVYSAVISEDAAVGDSVVMLIAEDLDSPP-NGQIHFSIVNGDQ------DNE- 3389
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
F + P KKK LDRE GY+L ++A D GTPP
Sbjct: 3390 ----FSVDPVLGLVKVKKK---------LDRERIS-GYSLVVQARDSGTPP 3426
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF VY+ +VKE+ P G +V L D D +N ++SY + GG+ G F++
Sbjct: 2921 NAPVFEHEVYRGSVKESDPPGEVVAVLSTWDEDTSDVNRQVSYHITGGNPKGKFSL---- 2976
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 2977 --------------GLVQNEWKVYVKRPLDREEQDI-YYLNITATD 3007
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+PVFS +Y A V+EN GT VI +KA D D G+ +ISYS+ F ID G
Sbjct: 2494 SPVFSQSIYVAEVRENAAPGTKVIHVKATDGD-SGVYGQISYSIINDFAKDRFLIDANGQ 2552
Query: 63 L 63
+
Sbjct: 2553 I 2553
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 25/109 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A V EN L+ ++A D D G+N K++YS+ GYF++D
Sbjct: 3128 NPPVFSSDHYTACVYENTATKALLTRVQATDPD-VGVNRKVTYSLSDS-ADGYFSVD--- 3182
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKL-LDREIAPLGYNLTLRAVDKG 109
+ I++L+ LDRE+ YN+T++A D+
Sbjct: 3183 ------------------RSSGIIILEHPLDRELQS-SYNITVKASDQS 3212
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F Y + V E+ P+G+ V+ + A D D G N I+YS+ + L FTI
Sbjct: 469 HTPEFQQLSYSSFVNESVPVGSSVLAVSAVDED-RGENGYITYSIASLNSLP-FTI---- 522
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
N F V I + LD E +P Y +RA D G+P R
Sbjct: 523 --NQFTGV--------------ISTSEELDFESSPESYRFIVRASDWGSPYRH 559
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 48/116 (41%), Gaps = 24/116 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG--DGLGYFTIDN 59
N PVF Y AT+ E IGT V+ + A DAD N + Y + + YF ID+
Sbjct: 2284 NPPVFDQSAYNATLSEASLIGTPVLQVVATDADSDN-NKIVQYQIVQDTFNSTDYFHIDS 2342
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
L I+ ++LD E+ +L +RA D G PP +
Sbjct: 2343 SSGL--------------------ILTARMLDHELIQ-QCSLKVRATDNGFPPMSS 2377
Score = 39.7 bits (91), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D++
Sbjct: 2391 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYSILSGNDRTSFIMDSKS 2449
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D ++++ G+ FT+D G
Sbjct: 3443 NSPVFTPANYTAVIQENKPVGTSILQLVVTDKDSFHNGPPFTFTILTGNEEEEFTLDPHG 3502
Query: 62 PL 63
L
Sbjct: 3503 VL 3504
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 23/116 (19%)
Query: 3 APVFS-DFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
AP F F V E+ P+G ++ +KA DAD G N ++ Y++ G+ F ID E
Sbjct: 723 APHFDKSFPADVKVSEDLPVGATILRIKAYDAD-SGFNGRVLYTISDGNVDSCFNIDMEM 781
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ + VL LDRE L Y L + D G P + +++
Sbjct: 782 GI--------------------LSVLMPLDREKTEL-YLLNITIYDLGNPQKSSWR 816
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 36/78 (46%), Gaps = 16/78 (20%)
Query: 37 GMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIA 95
G N +I S S+ GD L F + EG EY I K +D +
Sbjct: 293 GANGEIESVSIVAGDPLEQFFLSKEGKW---------------MNEYKIKERKPIDWDSF 337
Query: 96 PLGYNLTLRAVDKGTPPR 113
P GYNLTL+A DKG+P +
Sbjct: 338 PYGYNLTLQAKDKGSPQK 355
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLG----YFTI 57
N PVF Y A + E PIGT ++ +KA DAD N +++Y++ L FTI
Sbjct: 2811 NKPVFEAANYDAVIMEGMPIGTKLMQVKAVDADSSA-NGQVTYTLEVESELQKITEAFTI 2869
Query: 58 D-NEGPLNHFR 67
D N G ++ +
Sbjct: 2870 DSNSGWISTLK 2880
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP+ S+ +Y + EN P VI ++A D D N K++Y + G+ +F I+
Sbjct: 1145 NAPLTSEPIYYPVIMENSPKDVSVIQIQAQDPD-SSTNEKLTYRITSGNPQNFFVIN 1200
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F ID
Sbjct: 934 SPAFIPSSYNVKVLEDLPVGTVIAWLETHDPD-LGLGGQVRYSLV-NDYNGRFEID---- 987
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 988 ----------------KASGAIRLNKELDYEKQQF-YNLTVRAKDKGRP 1019
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAPVF Y A V+ + GTL+ + A D D G N ++SY +R + G+F ID
Sbjct: 2081 NAPVFVGLPYYAAVQVDAEPGTLIYRVTAIDKD-KGDNGEVSYLLR--EDYGHFEID 2134
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ GT V+++ A D G N++I+Y +R G+ G F I+++
Sbjct: 3233 NPPVFERRDYLVTVPEDTSPGTEVLSVFATSQDI-GTNAEIAYLIRSGNEKGKFRINSKT 3291
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ I +++ LD E Y L + A D GTP
Sbjct: 3292 GV--------------------ISIIEALDFESCKDFY-LVVEAKDGGTP 3320
Score = 35.0 bits (79), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 41/108 (37%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PV Y A E+ P +++ + A DAD G N +I YS+ G +F G
Sbjct: 3026 NNPVCEQVAYTALFPEDIPPNKVILKISAKDAD-IGSNGEIRYSLYGSGNNKFFLDPENG 3084
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
L L LDRE P YNL RA D G
Sbjct: 3085 ELKS---------------------LAPLDREKIP-AYNLVARATDGG 3110
>gi|354490726|ref|XP_003507507.1| PREDICTED: protocadherin Fat 1-like [Cricetulus griseus]
gi|344246355|gb|EGW02459.1| Protocadherin Fat 1 [Cricetulus griseus]
Length = 4589
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 58/116 (50%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVFS FV + VKE+ P G+ V+T+ A D D G + +I YS+R G G+G F ID
Sbjct: 1030 LHPPVFSSFVEKGVVKEDVPTGSSVMTVSAHDED-TGRDGEIRYSIRDGSGVGVFRIDE- 1087
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
V I+ + LDRE + Y LT+ A D+G P ++
Sbjct: 1088 --------VTGVIETSDR-----------LDRE-STSHYWLTVYATDQGVVPLSSF 1123
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y V E+ + VIT+ A DAD P NS I YS+ G+ FTID
Sbjct: 3332 NTPVFSQDTYTTVVGEDAALEQSVITIMADDADGPS-NSHIRYSIIEGNQGSPFTID--- 3387
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P + + + V K LDRE GY LT++A D G PPR
Sbjct: 3388 --------PIRGE---------VKVTKPLDRETIS-GYTLTVQAADNGNPPR 3421
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N +++Y + GGD LG F ++N
Sbjct: 2917 PRFTAEIYKGTVSEDDPPGGVIAILSTTDADSEEINRQVTYFITGGDALGQFAVEN---- 2972
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ + V K LDRE Y LT+ A D
Sbjct: 2973 --------------IQNEWKVYVKKPLDREQKD-SYLLTITATD 3001
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 58/119 (48%), Gaps = 25/119 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP F+ Y TV EN GTL+ ++A DAD G+N KISYS + D G F+I
Sbjct: 3122 NAPEFTADPYTITVFENTEPGTLLTRVQATDAD-AGLNRKISYSLIDSAD--GQFSISEV 3178
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I + K LDRE + Y LTL+AVD+G P + T +T
Sbjct: 3179 SGI--------------------IQLEKHLDREQQAV-YTLTLKAVDQGVPRKLTATST 3216
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 52/112 (46%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A+ EN PIGT V+ + A D D G N ++YS+
Sbjct: 460 NPPEFTQTAYKASFDENVPIGTTVMRVSAVDPD-EGENGYVTYSIAN------------- 505
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
LNH VP ID T ++ + LD E+ P Y L +RA D G P R
Sbjct: 506 -LNH---VPFVIDHFTG----SVSTSENLDYELMPRVYTLRIRASDWGLPYR 549
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKEN P+G + + A D D G N K+ Y++ GG+ FTID E +
Sbjct: 727 VKENLPVGANIAFMNATDLDS-GFNGKLVYAISGGNDDSCFTIDMESGM----------- 774
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ VL LDRE+ Y L + D G P R ++
Sbjct: 775 ---------LKVLSPLDREVTD-KYTLNITVYDLGIPQRAAWR 807
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ IGT V+ + AA D N++I+YS+ G+ G F++D+
Sbjct: 3227 NPPVFEYREYGATVSEDILIGTEVLQVYAASRDIEA-NAEITYSIISGNEHGKFSMDS-- 3283
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I +++ LD E + Y LT+ A D GTP
Sbjct: 3284 ------------------KTGAIFIIENLDYE-SSHEYYLTVEATDGGTP 3314
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P+F +Y+A + E+ G V+ +KA DAD ++ K+ YS+ G+ F ID+E
Sbjct: 2387 NPPLFEQQIYEAKISEHAAHGHFVMCVKACDADSSDLD-KLEYSILSGNDHKSFVIDSE 2444
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ +G++V+ + A D D G N+++ YS+ G+ FTID
Sbjct: 1559 HAPWFTSSSYEGRVYESAAVGSVVLQVTALDKD-KGKNAEVLYSIESGNIGNSFTID--- 1614
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+ +I + LDR + Y+L ++A D+G PP
Sbjct: 1615 PILG-----------------SIKTARELDRS-NQVEYDLIVKATDQGNPP 1647
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 23/101 (22%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
Y V+E+ P GT+++ L+A D D G +S++ YS+ G G+F +D
Sbjct: 933 YSVKVREDLPEGTIIMWLEAYDPD-VGQSSQVRYSLL-DHGEGHFDVD------------ 978
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT+RA DKG P
Sbjct: 979 --------KLSGAVRIVQQLDFEKKQV-YNLTIRAKDKGKP 1010
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 19/90 (21%)
Query: 25 VITLKAADADPPGMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYN 83
++T++ D G N +I S S+ GD L F+ V + PG+K +
Sbjct: 276 IVTVEDCDQ---GANGEIASLSIVAGD-----------LLQQFKTVRSF--PGSKT--FK 317
Query: 84 IVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ + +D + P GYNLTL+A DKGTPP+
Sbjct: 318 VKAIGAIDWDSHPYGYNLTLQAKDKGTPPQ 347
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+++PVF Y+A + EN P+ TLV +KA D D G+ S I+Y + F +++
Sbjct: 2488 LHSPVFLQNEYEAELAENAPLHTLVAQVKAMDRD-SGIYSHITYHIVNDFAKDRFYVNDR 2546
Query: 61 GPL 63
G +
Sbjct: 2547 GQI 2549
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTID 58
N+PV Y+A + EN P G+ VI ++A+D D G N ++ YS+ +G D + F I+
Sbjct: 2806 NSPVLESNPYEAFIVENLPGGSRVIQIRASDLD-SGTNGQVMYSLDQSQGADIIESFAIN 2864
Query: 59 NE 60
E
Sbjct: 2865 VE 2866
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y+ + + GT V+ + A+DAD G N+ ++Y++ D+E
Sbjct: 2593 NAPQFRSTKYEVNIGSSAAKGTSVVKVFASDAD-EGSNADVTYAIEA---------DSES 2642
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I K+ KE L L+ E + +RAVD G+PPRE+
Sbjct: 2643 VKENLEI--NKLTGLITTKE----SLIGLENEF----FTFFVRAVDNGSPPRES 2686
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 21/114 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S+ VY + EN P V+ ++A D D + K++Y + G+ G+F+I +
Sbjct: 1136 NAPQTSEPVYYPEIIENSPKDVSVVQIEAFDPDSSS-SDKLTYKITSGNPQGFFSIHPK- 1193
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
T + T +K LDRE + L + D GTPPR T
Sbjct: 1194 ---------TGLITTTSRK---------LDREQQD-EHILEVTVTDNGTPPRST 1228
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 20/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y T+ E IGT V+ +KA D+D N +SY + G +
Sbjct: 2280 NPPVFVQQSYTTTLSEAAVIGTPVLQVKATDSDSEP-NRGVSYQMFGNHSKSH------- 2331
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+HF ID T I +++ LD E + + +RAVD G PP
Sbjct: 2332 --DHFH-----IDSNTGL----ISLVRALDYE-QFQQHKVFVRAVDGGMPP 2370
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 55/114 (48%), Gaps = 10/114 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS Y ++EN+P+G V+ L D D +++ G+ DN
Sbjct: 3437 NAPLFSRDNYSVIIQENKPVGFSVLKLVVTDKDSSHNGPPFFFTIVSGND------DNTF 3490
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR---EIAPLGYNLTLRAVDKGTPP 112
+N ++ T K+K++ ++ +K+ D +++ L + + +R +++ P
Sbjct: 3491 EVNQHGVILTAGAIKRKEKDHYLLHVKVADNGKPQLSSLTH-IDIRVIEESIHP 3543
>gi|432892794|ref|XP_004075840.1| PREDICTED: protocadherin Fat 3-like [Oryzias latipes]
Length = 4611
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 43/111 (38%), Positives = 55/111 (49%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS +Y A V E+ IG V+ L A D+D +N + YSV GD F ID
Sbjct: 3365 NAPMFSRDLYTAFVSEDAFIGEFVVQLVAEDSD-SHLNGAVLYSVVSGDQGSQFFID--- 3420
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+N I V K LDRE P ++LT+RA+D G PP
Sbjct: 3421 PINGV-----------------IKVNKPLDRETIP-SFSLTIRALDSGVPP 3453
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP F+ F VKEN IGT ++ + A D D G + +I YS+R G GLG F+ID E
Sbjct: 1056 APYFTHFALTGVVKENARIGTTLLQVSAND-DDTGRDGEIHYSIRDGSGLGRFSIDEETG 1114
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I +LDRE Y LT+ A D+G P+ T
Sbjct: 1115 V--------------------IYTTDILDRETKD-SYWLTVYASDRGVVPQFT 1146
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 31/56 (55%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
NAPVF++ Y TV+E+ P G +V L D D +N IS + GG+ G F +
Sbjct: 2948 NAPVFTETHYIGTVRESDPPGEVVAVLNTRDEDSSVVNQHISIHITGGNDRGVFAL 3003
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+++PVF VY+A ++EN +GT VI +KA D D I+YS G F+ID+
Sbjct: 2510 LHSPVFERSVYEAELRENAAVGTTVIQVKATDKDQEPF-GHITYSFANDVGSDQFSIDSN 2568
Query: 61 G 61
G
Sbjct: 2569 G 2569
Score = 42.0 bits (97), Expect = 0.082, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P +Y A++ E+ P+ +L++T+ A DAD G+N++I YS+ G +
Sbjct: 3053 NSPDCDQVMYTASIPEDLPVHSLLLTVGATDAD-VGVNAQIQYSLHGSGSQDF------- 3104
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
IDP T + + L LD E P Y L ++A+D G
Sbjct: 3105 ----------SIDPDTGE----VKSLVTLDHEKTP-SYRLVVQAMDGG 3137
Score = 41.6 bits (96), Expect = 0.096, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 50/112 (44%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS Y+ V E+ P+GT V+T+ A D D RG +G ++I +
Sbjct: 483 NTPTFSQSSYEVFVNESVPVGTNVLTVSATDED------------RGENGYITYSISSLQ 530
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
PL P KID + I LLD E + + +RA D G+P R
Sbjct: 531 PL------PFKIDQFSGV----ISTSSLLDFESSTEIFVFLVRASDWGSPYR 572
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAPVF+ +Y+A V E P G + ++A+DAD + K+ YS+ G+ +F ++
Sbjct: 2409 NAPVFNQLLYEAYVSELAPRGHFITCVQASDADSSDFD-KLEYSILSGNERMHFVLE 2464
Score = 39.7 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 24/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P+F+ +Y+ +V E+ G+ V+ + A D D G N+++ YS+ G N G
Sbjct: 1581 HVPIFTSPLYEGSVYESAAKGSAVVQVTALDKD-KGKNAELRYSIEAG---------NTG 1630
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVDKGTPPRET 115
N FRI P G +N+ ++ +G Y +T+R D G PP T
Sbjct: 1631 --NTFRIEPVL---GIISVAHNL--------DLTNVGHYVVTVRVTDNGVPPLST 1672
Score = 38.5 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P+F V++A E+ P+GT+V L+ D D G+ ++ +S+ D G+F +D
Sbjct: 949 SPLFIPSVFKARALEDLPVGTVVAWLETHDPD-LGLGGQVRFSLV-NDHNGWFELD---- 1002
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT++A DKG P
Sbjct: 1003 ----------------KASGAIRLTKELDYETQQF-YNLTVKAKDKGRP 1034
Score = 38.5 bits (88), Expect = 1.00, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKI-SYSVRGGDGLGYFTIDNE 60
+APV S T +++ +L + D G+N +I S + GD LG F ++
Sbjct: 280 HAPVIS----AVTHHDSKLYKSLAYAIVNVDDSDEGVNGEIDSVIIVDGDPLGQFFLEK- 334
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
TK+ EY I + ++ E P G N+TL+A D+G PP+
Sbjct: 335 ----------------TKENEYAIKATESINWESFPFGCNITLQAKDRGIPPK 371
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS A ++EN+PIGT ++ L D D S+ + G+ F + +G
Sbjct: 3470 NPPTFSSANLTAVIQENKPIGTTILQLSVIDRDSSRNGPPFSFQILSGNEGREFVLKEDG 3529
Query: 62 PL 63
L
Sbjct: 3530 TL 3531
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F TV E+ +GT V+ + AA D G N++I+Y++R G+
Sbjct: 3260 NHPIFEHRDQLTTVPEDVRVGTEVLRVYAASKD-IGTNAEITYTIRSGN----------- 3307
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
H R + P + I+V + LD E Y LT+ A D GTPP
Sbjct: 3308 --EHRRF---HVHPHSGA----IIVAQPLDYETCR-DYFLTVEARDGGTPP 3348
Score = 36.2 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P+F Y ++ E IGT V+ + A+D D N+ I Y + + + YF ID+
Sbjct: 2302 NPPIFQKMSYSVSLSETAMIGTPVLQVIASDQDSE-KNNIIRYQIFSQLHNSTDYFHIDS 2360
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L I+ ++LD E+A Y +RA D G P
Sbjct: 2361 SSGL--------------------ILTARMLDHELAH-NYYFVVRATDNGYP 2391
Score = 35.4 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 14/108 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y ATV E +GT VI ++A+D D G N +++Y + G + N
Sbjct: 2834 NRPAFETNSYVATVMEGTAVGTKVIRVQASDPD-SGANGQVTYRL----GSLIKSKGNSE 2888
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
PL+ ID + I + LD E +P Y T+ A+D G
Sbjct: 2889 PLSDI----FNIDSNSGW----IFIRTDLDHETSPF-YTFTVVALDHG 2927
Score = 35.4 bits (80), Expect = 8.2, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTID 58
NAP+ S+ +Y+ +V EN P VI ++A D D P +SY + G+ +F +D
Sbjct: 1160 NAPLTSEPLYRPSVPENSPPDVSVIQIQAQDPDTSPSTSLHWLSYQIVSGNPQHFFNMD 1218
>gi|410915852|ref|XP_003971401.1| PREDICTED: protocadherin Fat 3-like [Takifugu rubripes]
Length = 4766
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
AP F DF + +VKEN GT V+T+ A D D G + + YS++GG+GLG FTID +
Sbjct: 1033 APYFPDFAMRGSVKENSRAGTSVLTVSAKD-DDKGRDGALRYSIKGGNGLGTFTIDED 1089
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 41/111 (36%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF Y TV E+ +GT V+ + A D G+N++I+Y +R G+ LG FTID
Sbjct: 3250 NAPVFQRRDYGVTVPEDVAVGTEVLRVLATSVDI-GLNAEITYRIRSGNELGKFTID--- 3305
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
T++ I V LD E+ Y LTL A D G PP
Sbjct: 3306 ---------TQLGA--------IFVADDLDFEVCK-DYYLTLEAWDGGNPP 3338
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ VY AT E+ P GT V+ + A D D G+N +++Y++ G+ G F ID
Sbjct: 1555 NIPYFTSTVYDATAYESSPSGTSVLQVTALDKD-NGINGQLTYTIEAGNTGGVFGIDAAT 1613
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVDKGTPP 112
L I + + LD + +G Y LT+R D G PP
Sbjct: 1614 GL--------------------IFIARALD--LTSVGFYTLTVRVTDSGFPP 1643
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS +Y V E+ +G +V + A D D +N +I+YS+ GD
Sbjct: 3355 NAPTFSQDIYNVLVSEDASVGQMVTRVSAEDLDSQ-VNGRITYSILKGD----------- 3402
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
NHF IDP T + N K LDRE+ Y+L+++A D G+P
Sbjct: 3403 RNNHFW-----IDPVTGILKVN----KRLDRELVSR-YSLSVQAFDSGSP 3442
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 55/135 (40%), Gaps = 19/135 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ SD +Y V EN P VI ++A D D S++SY + G+ +F+I
Sbjct: 1137 NAPLTSDPIYHPVVMENSPKDVSVIRIQAQDPDLTSTPSRLSYRITAGNPQNFFSINPRT 1196
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAP-----LGYNLT 102
D E HF V P T ++ V++ + D P + Y ++
Sbjct: 1197 GLITTTTRKLDREQQAEHFLEVTVIDGPVTTRQSTVWVIVHVEDENDNPPTFPEVTYRIS 1256
Query: 103 LRAVDKGTPPRETYK 117
L D+ Y+
Sbjct: 1257 LTERDRNKRGEPVYR 1271
Score = 42.0 bits (97), Expect = 0.084, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+PVFS Y A V+EN P G+ VI ++A D D G+ +I+YS G F +D +G
Sbjct: 2496 SPVFSQRFYLAEVQENAPPGSKVIQVRATDED-SGLFGQITYSFINDLGKTKFAVDADG 2553
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ A ++ NQP G+ ++ L D D P + + G+G +F++D G
Sbjct: 3460 NPPAFTPPNSTAIIQLNQPAGSTMLKLSVTDKDSPRNGPPFEFRIVSGNGENFFSLDQAG 3519
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L R+ DP + P + L ++A D G P
Sbjct: 3520 TLRSNRV----FDPES------------------PREFTLEIQASDSGKP 3547
Score = 38.9 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F+ Y ++ E+ P+GT+V+ A D+D +G +G TI E
Sbjct: 463 NSPAFNKPFYDISINESLPLGTVVLVASATDSD------------KGENGFVTHTIAGEM 510
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
L P ID T + I + + LD E + Y+ +RA D G P R
Sbjct: 511 SL------PFSIDQNTGE----IRITQDLDFESSDDIYSFAVRASDWGAPYR 552
Score = 38.5 bits (88), Expect = 0.94, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 18/92 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F +Y+ VKE+ +G +V LK D D N +S+ + GG+ G F +
Sbjct: 2937 NPPRFERELYRGAVKESDSLGEVVAVLKTRDRDGTDQNRLVSFYISGGNPRGVFGL---A 2993
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
P+ + E+ + V LLDRE
Sbjct: 2994 PV---------------QGEWKVYVSGLLDRE 3010
Score = 38.5 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P+ + VY A+ E+ PI ++T+ A DAD G +++I YS+ G ++ N G
Sbjct: 3042 NSPICNQAVYSASFPEDMPINKGILTVAATDAD-SGSSAEIQYSLFGIGVEDFYMDANTG 3100
Query: 62 PLNHFRIVPTKIDPGTK 78
L ++ + P K
Sbjct: 3101 ELRSATVMDRETTPSYK 3117
Score = 37.0 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N P+F Y +TV E P+GT V+ ++A D D G N +++YS+
Sbjct: 2813 NKPMFETNTYVSTVMEGMPVGTRVVQVRALDPD-WGSNGQVTYSL 2856
Score = 35.4 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+D EY++ L+D + P G NLTL+A D+G PPR
Sbjct: 313 VDRSPLGNEYSVKTSDLVDWDSFPYGCNLTLQAKDRGIPPR 353
>gi|38146369|gb|AAR11557.1| fat1-like [Gallus gallus]
Length = 138
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 55/116 (47%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P FS F + VKE+ PIG+ V+T+ A D D G + +I YS+R G G+G F ID E
Sbjct: 37 LHPPRFSVFADKGFVKEDAPIGSSVMTVSAYDED-EGRDGEIRYSIRDGSGMGVFRIDEE 95
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE Y LT+ A D+G P ++
Sbjct: 96 KGI--------------------IETADHLDRETTS-HYWLTVYATDQGVVPLSSF 130
>gi|449267132|gb|EMC78098.1| Protocadherin Fat 2 [Columba livia]
Length = 4375
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F Y A ++E+ +G +++T+ A D D MN++I+YS+ G+
Sbjct: 3320 HAPEFIQDPYFADIREDAAVGEIILTVSADDLD-GAMNNQITYSIVEGN----------- 3367
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
PL HF I P K I + K LDRE P Y+LT+RA D G P +
Sbjct: 3368 PLGHFAIQP---------KSGQISIAKHLDREEIP-SYSLTVRATDNGHPAQ 3409
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 65/117 (55%), Gaps = 11/117 (9%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P FS Y+A V ++ +GT ++ ++A D D G N++I YS++ G+G G+F+ID
Sbjct: 1551 LHPPQFSSIHYEAEVLDSAVVGTEIMQVRALDQDQ-GANAEIHYSLQAGNGEGFFSID-- 1607
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLT----LRAVDKGTPPR 113
+ V K+DP ++E +++K D+ L + T +R D+ TPP+
Sbjct: 1608 -LYSGIITVAQKLDPS--RQERFTLIVKAEDQGFPQLKDSATVHVRIRPSDR-TPPK 1660
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 13/89 (14%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ FV++ V+EN P GT V+ + A D D G + ++ Y R G GL F+I+ +
Sbjct: 1029 LHPPRFASFVFKGWVQENSPEGTSVMMVTAKDID-KGKDGEVQYFFREGTGLSVFSIEKD 1087
Query: 61 -------GPLN-----HFRIVPTKIDPGT 77
GPL+ H+ + +D GT
Sbjct: 1088 TGTIRTTGPLDREGTSHYWLTVLALDLGT 1116
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAP F+ Y+ +V EN G +V+TL DAD N +++ + GD LG FT++
Sbjct: 2903 NAPQFTSDFYKGSVIENAEPGQVVVTLSTIDADISEQNRRVTCYITEGDALGQFTVNQ 2960
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP FS Y+ EN P GT V+T++A D D G +G +TI N+
Sbjct: 457 HAPSFSQSSYRGAFDENVPPGTSVLTVQATDED------------EGNNGFVTYTIANQ- 503
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+ VP IDP + I K +D E+ Y+L + A D G+P R
Sbjct: 504 -----KSVPFVIDPYSGI----ISTSKSMDYELMQRWYHLRVWASDWGSPFRH 547
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N PVFS +Y A+V E+ P T V+ L A+D D G N +SY + G D +F ID
Sbjct: 2269 NPPVFSQMIYTASVSESLPAQTPVVQLFASDKD-SGRNKAVSYQILDDGSDATKFFNID- 2326
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G+ + I + LD E + + +RA D G PP
Sbjct: 2327 ----------------GSTGQ---ITTAQALDYE-RNQQFRMKVRATDHGMPP 2359
Score = 42.7 bits (99), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG--LGYFTIDN 59
N PVF Y+A V EN P GT VI + A D D G + +++YS+ G G FTID
Sbjct: 2795 NRPVFEADPYKAFVMENMPSGTTVIQVTANDQD-TGNDGQVTYSLEAESGNLRGLFTIDG 2853
Query: 60 EG 61
E
Sbjct: 2854 ES 2855
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 48/104 (46%), Gaps = 15/104 (14%)
Query: 2 NAPVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP F D F + E PI + + L A D D G N K+ Y + G+ FTID E
Sbjct: 712 NAPKFDDSFPRSIDIIETVPINSTIADLSAVDPDT-GFNGKLVYVISDGNDDSCFTIDLE 770
Query: 61 -------GPLNHFR-----IVPTKIDPGT-KKKEYNIVVLKLLD 91
PL+H R + T D GT +K + ++ + +LD
Sbjct: 771 LGLLQVLSPLDHERTSFYILNITVYDLGTPQKSSWKLLAVNVLD 814
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y V+EN P+GT V+ L +D D P S+ + G+ F + G
Sbjct: 3425 NPPRFFQLNYSVVVQENAPVGTSVLELIMSDRDTPENGPPYSFQITQGNDGKAFDVTQNG 3484
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG 98
L I+ ++ KE ++ +++ D I PL
Sbjct: 3485 LLVTSSILNRRM------KEQYLLQVQVSDSGIPPLS 3515
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P FS Y+A V E G +VI ++A D D G +++ Y + G+ +FTI++
Sbjct: 2376 NPPEFSQLQYEAKVSEMATCGHIVIKVQALDPD-SGDTTRLEYVILSGNDNRHFTINS 2432
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
P+FS Y+ +++E+ P+ T+V TL A DAD G N++ Y++ L FT+
Sbjct: 149 PLFSPPSYKVSIREDTPLKTVVCTLSATDAD-AGQNAEFYYALNTKSDL--FTV 199
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 10/92 (10%)
Query: 27 TLKAADADPPGMNSKISY---SVRGGD---GLGYFTIDNEGPLNHFRIVPTKIDPGTKKK 80
++ + PP + Y SV GD G+ + P HF+ + +
Sbjct: 258 SISSVKVTPPDSDEDFLYATLSVESGDSEAGIDSVDFVDGDPGRHFKAIKSYF----GST 313
Query: 81 EYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
E+ IV K ++ + P G+NL+L+A DK PP
Sbjct: 314 EFMIVSTKEINWLLYPFGFNLSLQAKDKSKPP 345
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 56/127 (44%), Gaps = 19/127 (14%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F VY+A + EN IGT VI L A D D G I Y++ F+ID++G
Sbjct: 2479 SPSFRQNVYEAELAENAEIGTKVIELLAIDPD-GGPYGTIDYTIINKLAHEKFSIDDKGH 2537
Query: 63 LNHF----------RIVPTKI--DPGTKKKEYNIVVLKLLDREIAP-----LGYNLTLRA 105
+ R++ K+ G K + V + L D P Y L++++
Sbjct: 2538 ITTLQKLDRENSTERVIAIKVMAKDGGGKVAFCTVKIILTDENDNPPQFKASEYTLSIQS 2597
Query: 106 -VDKGTP 111
V KG+P
Sbjct: 2598 NVSKGSP 2604
>gi|348557432|ref|XP_003464523.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2-like [Cavia
porcellus]
Length = 4356
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F +Y A V EN G +++T+ A D D P +NS I+YS+ GG+ LG+FTI
Sbjct: 3319 HHPRFPKDLYSARVLENAIRGDIILTVSATDEDGP-LNSAITYSLVGGNQLGHFTI---- 3373
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+ + V K LD E Y+L LRA D G PP
Sbjct: 3374 ----------------HPKKGELQVAKALDWEQTS-SYSLKLRATDSGQPP 3407
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ FVYQ V+EN P GT V+ + A D D G + +I Y +R G GL F+ID +
Sbjct: 1027 LHPPRFASFVYQGQVQENSPPGTQVMQVMAQD-DDNGSDGEIQYFLRAGTGLAAFSIDPD 1085
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ R LDRE P Y LT+ AVD G+ P
Sbjct: 1086 TGMIQTR--------------------APLDRESVPY-YWLTVLAVDGGSVP 1116
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 52/113 (46%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP+F+ Y T+ EN P GT V+T+ A D D PG N I+YS+
Sbjct: 454 HAPIFNRSSYDGTLDENIPPGTSVLTVTATDQD-PGENGYITYSIIAP------------ 500
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+ VP IDP + I K +D E+ Y +RA D GTP R+
Sbjct: 501 -----KAVPFSIDPFSGV----ISTSKPMDYELMRRIYMFRVRASDWGTPFRQ 544
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 51/113 (45%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P FS VY V E P T VI L A+D D G N +SY + G D +F I+
Sbjct: 2268 NPPTFSQLVYTTAVSEGLPAQTSVIQLLASDQD-SGHNRDVSYEIVEDGSDASKFFQIN- 2325
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G+ + +V L+ LD E A +++ +RA D+G PP
Sbjct: 2326 ----------------GSTGE---MVTLQELDYE-AQRHFHVKVRATDRGNPP 2358
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y+ +V EN G LV TL+ DAD N +++ + GD LG F I G
Sbjct: 2904 NAPRFTSEDYRGSVVENSEPGELVTTLRTLDADISEQNRQVTCYITEGDPLGQFAISQVG 2963
Query: 62 PLNHFRIVPTKIDPGTKKKEY 82
+ +RI K T +EY
Sbjct: 2964 --DEWRISSRK----TLDREY 2978
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P S V+ + EN P+GT V+ L A D DP K+++++ G+ +G FT+
Sbjct: 1133 NPPRMSRPVFYPCIVENAPLGTSVLQLDARDPDPSS-RGKLTFNITAGNHVGVFTLH--- 1188
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLD 91
PL ++D + K+ +I+ + +LD
Sbjct: 1189 PLTGLLSTARQLD--RESKDEHILEVTVLD 1216
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 9/65 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F + +++++ P+G V+T A D D + Y + G+ LGYF
Sbjct: 560 NRPMFEEVNCTVSIRQDWPVGRSVMTFSAIDVDEL---QNLKYEIVSGNELGYFD----- 611
Query: 62 PLNHF 66
LNHF
Sbjct: 612 -LNHF 615
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 41/111 (36%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y V+EN P+G+ V+ L +D D P S+ + G+ F + EG
Sbjct: 3424 NPPRFFQLNYSTAVQENSPVGSQVLQLILSDPDSPENGPPYSFRITKGNAGSAFRVTPEG 3483
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L V L R A Y L + D GTPP
Sbjct: 3484 WL---------------------VTTAGLSRA-AQEQYQLQIEVSDSGTPP 3512
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLG---YFTID 58
N PVF Y+A + EN P GT VI + A D D G + ++SY + G F ID
Sbjct: 2795 NRPVFEADPYKAFLTENMPGGTTVIQVTANDQD-TGNDGQVSYRLSAEPGSSVHELFAID 2853
Query: 59 NEG 61
+E
Sbjct: 2854 SES 2856
>gi|291242490|ref|XP_002741140.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like
[Saccoglossus kowalevskii]
Length = 2761
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 42/115 (36%), Positives = 54/115 (46%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
N PVF + Y+ ++E+ GT VI + A DAD G+N +I Y+ GG DG G F ID+
Sbjct: 915 NYPVFKESSYRGEIREDVSKGTSVIRISAEDAD-EGLNKRIRYTFSGGDDGNGAFIIDSN 973
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
L I LDRE + YNL A D+GTP R T
Sbjct: 974 SGL--------------------IRTDARLDREEVAV-YNLEAYATDRGTPQRRT 1007
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+P F V + EN PIG+LV T+ A D D GMN+ +++S+ GGD +F +D
Sbjct: 1021 NSPKFRSAVINVEINENSPIGSLVDTIVATDPD-EGMNAVVAFSIVGGDE-QFFALD 1075
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS Y+ + E+ ++ ++ A D D G N++I YS+ GG G+F ID+
Sbjct: 501 NYPQFSQRTYEVIIPESISPNVVIESIIATDRDE-GTNAEIRYSMVGGHSQGHFAIDSFS 559
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I V+ +D EI Y L +RA D G PP+
Sbjct: 560 G--------------------QITVISRIDYEITS-NYRLVIRAQDSGRPPK 590
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F +YQ +V+E+ IG+ +I L+A D D G+ S+++YS+ F+I+
Sbjct: 606 NEPRFPSTLYQTSVREDLRIGSSIINLQAFDED-SGLFSQLTYSISNAPTGNPFSINENS 664
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ IV + LDRE Y+ A D+G PP+
Sbjct: 665 GM--------------------IVTTRELDRETTSR-YDFVAVAQDQGDPPK 695
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 52/109 (47%), Gaps = 21/109 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+F + YQ ++EN GT +I ++A D D G NS I YS+ I+ + P
Sbjct: 395 PIFENAAYQLPIRENVDPGTTIIEIRATD-DDIGSNSDIRYSI----------INPDAPN 443
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ FR ID GT I LDRE + Y + + AVD G+ P
Sbjct: 444 DVFR-----IDQGTGV----ITTRSRLDRETV-VQYIIEVLAVDLGSNP 482
Score = 40.4 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 48/110 (43%), Gaps = 25/110 (22%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF Y +V E+ P G+ V+ + A D D G N++I+YS+ D + F ID
Sbjct: 815 PVFEQSPYSVSVDEDVPTGSTVVVVHATDGD-VGENARITYSM---DNIPEFEIDE---- 866
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
D G I+ LDRE L Y L + A D G P+
Sbjct: 867 ----------DTGA------ILTKMELDRE-TKLSYTLHVTAQDNGLKPQ 899
Score = 35.8 bits (81), Expect = 6.3, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N P F+ Y V+E+ GT V T+ A DAD S +SY + G+ F+I
Sbjct: 711 NPPTFTQSEYNVVVEEDARPGTSVATVTATDADE---ESSVSYQITAGNTRNRFSI 763
>gi|334311403|ref|XP_003339609.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2-like [Monodelphis
domestica]
Length = 4351
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 52/108 (48%), Gaps = 22/108 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F VY VKE+ +G ++T+ A D D P +NS I+YS+ GD LG+FTI
Sbjct: 3315 PKFPQDVYSVEVKEDVAVGETILTVSAVDGDGP-LNSAITYSLVAGDQLGHFTIH----- 3368
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
KK E I K LD E Y+LTLRA D G P
Sbjct: 3369 -------------PKKGELQIA--KHLDWEETS-SYSLTLRATDSGQP 3400
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ FVYQ V+EN GTLV+++ A DAD G + I Y +R G L F+ID +
Sbjct: 1023 LHPPRFASFVYQGQVEENSLPGTLVMSVTAQDAD-FGQDGVIQYFLRDGTDLDTFSIDRD 1081
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I + LDRE +P Y LT+ AVD+G+ P
Sbjct: 1082 TGM--------------------IQTMMPLDREFSP-HYWLTVLAVDQGSVP 1112
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 48/110 (43%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+APVFS Y T EN P GT ++T+ A D D G N ++YS+
Sbjct: 453 HAPVFSQSSYHGTFDENLPPGTSILTVTATDQD-HGENGFVTYSITSP------------ 499
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
R VP IDP I + KL+D E+ Y + A D G+P
Sbjct: 500 -----RAVPFSIDPYLGV----ISITKLMDYELMQRLYTFRVWASDWGSP 540
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 40/92 (43%), Gaps = 18/92 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ VY+ +V EN G V TL+ DAD N +++ + GD LG F I G
Sbjct: 2898 NAPQFASEVYRGSVIENGEPGEHVATLRTLDADISEQNRQVTCYITEGDPLGQFGISQTG 2957
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
E+ I K LDRE
Sbjct: 2958 ------------------DEWKITTKKTLDRE 2971
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+++P F Y+ T +GT ++ ++A DAD G N ++ YS++ G+ FTID
Sbjct: 1545 LHSPSFIQLHYETTTSTIAALGTELLQVRALDADR-GFNGQVQYSLQAGNSESLFTID-- 1601
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P V K+D L+ ++ Y LT+RA D+G+PP
Sbjct: 1602 -PHLGIITVAQKLD--------------LMQQD----QYMLTVRAEDQGSPP 1634
Score = 43.1 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P S VY +VKE+ P+ T V+ L A D DP K+++ + G+ LG+F I++
Sbjct: 1129 NPPQMSRPVYYPSVKEDAPMNTSVLQLDAWDPDPVS-QGKLTFHITSGNNLGFFVINS 1185
Score = 41.6 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 51/114 (44%), Gaps = 26/114 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG--LGYFTID- 58
N PVFS VY A V E P T VI L A+D D G N +SY + D +F ID
Sbjct: 2263 NPPVFSQLVYSALVSEGLPPQTPVIQLLASDQD-SGRNKDVSYWILEDDSEDSSFFQIDE 2321
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ G ++ ++D T+++ Y + +RAVD G PP
Sbjct: 2322 SSGEMS----TTQELDYETQQQFY------------------VKVRAVDNGVPP 2353
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTID 58
N PVF Y+A + EN P+GT VI + A D D G+N +++YS+ +G F I+
Sbjct: 2789 NKPVFEADPYKAFLTENMPVGTTVIQVTANDQD-TGVNGEVTYSLALEQGNAAAELFAIN 2847
Query: 59 NE 60
+E
Sbjct: 2848 SE 2849
>gi|410931117|ref|XP_003978942.1| PREDICTED: protocadherin Fat 2-like, partial [Takifugu rubripes]
Length = 1091
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF + Y+ +KE+ G+LV+ + A D D P +NS + YS+ GD
Sbjct: 45 NPPVFEEGGYRVEIKEDLTPGSLVLKVTATDQDGP-VNSLLRYSIVSGD----------- 92
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PL F I P + I V LDRE P Y+LT++A D+G PP
Sbjct: 93 PLQQFSIHP---------RSGEISVATALDREEVP-HYSLTVQAADEGAPP 133
>gi|328791786|ref|XP_393497.4| PREDICTED: cadherin-related tumor suppressor [Apis mellifera]
Length = 4958
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 55/110 (50%), Gaps = 21/110 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y ATV E GT V+T++A D D N++ SYS+ GG+ F
Sbjct: 3379 PEFLQTTYDATVSEGAVHGTRVLTVRAVDKDIKPQNNQFSYSIIGGNIGQAF-------- 3430
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
K+DP T +I K LDRE P+ Y+LT+ A+D G+PP+
Sbjct: 3431 --------KVDPQTG----DIETAKQLDRETIPV-YDLTIGAIDTGSPPQ 3467
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 56/113 (49%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQ--PIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D Y A V EN P G VI +KA DAD P N ++ Y ++ GD
Sbjct: 2255 NAPVFLDSPYLAHVMENMVPPGGGFVIQVKAYDADTPPYNDQVRYFLKEGD--------- 2305
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ FRI + D I +L+ LDRE + Y LTL A+D G+PP
Sbjct: 2306 ---TDLFRINASTGD---------IFLLRPLDRE-SVAEYTLTLVAMDTGSPP 2345
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 51/111 (45%), Gaps = 23/111 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F + + EN IGT ++++ A D D G N ++ Y+V GGD G F + G
Sbjct: 1937 NAPIFEAGPHAVDIVENTTIGTPILSVTAQDLD-SGDNGRVIYAVAGGDENGDFGVAPNG 1995
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L KLLDRE PL YNL L A D +PP
Sbjct: 1996 TL---------------------FTRKLLDREQKPL-YNLVLSATDSPSPP 2024
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF Y A + E PIG+ V ++ A DAD G+N++I Y + G+ G+F ID +
Sbjct: 436 HEPVFQQSEYSAVLSELSPIGSFVASISATDAD-SGLNARIYYELDSGNEQGWFAIDQDT 494
Query: 62 PL 63
L
Sbjct: 495 GL 496
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 20/101 (19%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
ATV EN ++V + D D G N + S +R G+ LG+F + + R+
Sbjct: 340 ATVDENAVKDSIVAAITVIDNDE-GSNGETSVEIRAGNELGHFRLQTAATFDVVRV---- 394
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ G LDRE P YNLT+ A DKGTPPR
Sbjct: 395 -NGG-------------LDREEIP-KYNLTVVATDKGTPPR 420
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF Y ATV EN IG V+ + A D D G N ++ Y + GD FTI +G
Sbjct: 2146 NSPVFDPRQYSATVAENASIGASVLQVSAMDRD-EGANGRVRYGIAMGDDNRDFTISEDG 2204
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 47/118 (39%), Gaps = 22/118 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ V E IGT ++ + DAD G+N + YS+ G+ G F ID
Sbjct: 1179 NIPQFQRLPYRVQVNEGAAIGTQLLRVYTTDAD-EGLNGDVFYSLEDGNQYGRFAID--- 1234
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I + K LDRE Y LT+ A D G R + T
Sbjct: 1235 -----------------EATGQISLTKELDRETMD-SYVLTVVAHDAGLETRLSSSTT 1274
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
NAP F Y V EN IG V+ L A D G+N++ISY + R +FTID
Sbjct: 2990 NAPRFEQRSYLYPVPENYGIGKRVVQLIARDDADFGVNAEISYYLVNRANGTTEHFTIDE 3049
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+ + + + GT + L +RA+DKG PP++
Sbjct: 3050 KSGWVYIQNSLANVPVGTT--------------------FLLKVRAIDKGVPPQK 3084
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F + Y V EN P G+ + + A DAD G NS++SY++
Sbjct: 1831 NAPTFQNTAYSFDVPENMPRGSRIGQVVATDADADGPNSQLSYTL 1875
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
+AP F+ +Q V EN+P+ T ++T+ A D D G N I Y + G+ F +
Sbjct: 3099 HAPTFAAVSHQVRVPENEPVNTTILTVSATDGD-EGPNGMIRYKISAGNEKNEFFV 3153
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 45/110 (40%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F V EN+P GT+V+TL A D D P + +Y + GG T+D
Sbjct: 3483 NGPIFDPPEVIGYVNENEPAGTIVMTLSATDPDLPPNGAPFTYKLVGGRQSDMVTLD--- 3539
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
H ++ T + LDRE P +L + D G P
Sbjct: 3540 --KHTGVLKTT---------------RSLDREAMP-QLDLVIEVEDSGIP 3571
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P+F Y + E+ PIGT V+T++A D D NSK++Y + D FTID
Sbjct: 208 NPPIFQQSDYVVALNESAPIGTKVLTVRATDKDSED-NSKLTYYL--PDTETQFTID 261
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF + Y V E+ P GT V + A+DAD N+++ YS+ G G G F +D
Sbjct: 649 NSPVFYPWRYLMAVPEDAPPGTSVGKVMASDADAR-ENAQVRYSLESG-GEGLFGVD 703
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 51/118 (43%), Gaps = 29/118 (24%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGY---FTIDN 59
AP FS Q T+ EN P +LV TL A D D G N ++YS Y F +D
Sbjct: 542 APRFSLNQIQVTLSENTPPQSLVATLTAVDND-QGTNGSVAYSFHSSVARDYPKTFALDG 600
Query: 60 -EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVDKGTPPRET 115
G L TK+ LDRE +G Y + + A D+GTPP+ +
Sbjct: 601 LTGQLT------TKVH---------------LDRET--IGEYRILVIAKDQGTPPQSS 635
>gi|326666670|ref|XP_002661517.2| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Danio
rerio]
Length = 2844
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 55/112 (49%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
N+P F YQ TV E+ PI T V+ + A+D D G N ++SY+ +GG DG G F I+
Sbjct: 711 NSPRFGRDKYQGTVFEDAPIYTSVLQISASDRD-SGSNGRVSYTFQGGDDGEGDFMIEQY 769
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I + LDRE P+ YNL AVD+G PP
Sbjct: 770 SGI--------------------IRTHRKLDRENVPV-YNLRAYAVDRGVPP 800
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF + Y T E+QPIG+ V+ + A D D G N++I+Y + D + F ID
Sbjct: 610 PVFQNANYHQTFSEDQPIGSTVVVISATDED-TGENARITYIME--DNVPQFKID 661
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGY-FTIDNE 60
+ PVF Y+ ++EN +G VIT++A D D P N+ + Y + +G+ F ID+
Sbjct: 187 HGPVFEQNEYRVRIRENVEVGFEVITVRATDGDAPS-NANMIYRIMNEEGVNSGFEIDSW 245
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L ++ P DRE Y L + A D+G P
Sbjct: 246 NGLVKIKVRP--------------------DRETMA-QYQLIVEASDQGKEP 276
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 22/109 (20%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP+F +QATV EN PIG VI ++A D+D G N+++ YS+ F+I+N
Sbjct: 402 APMFVSTPFQATVLENVPIGYSVIHIQAIDSD-SGENARLDYSLTDTTPGFPFSINNSTG 460
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I V LDRE Y + A D G P
Sbjct: 461 W--------------------ITVSDELDRESTEF-YTFGVEARDNGVP 488
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG 48
+ P F YQ +V EN+P GT VITLKA +D PG KI Y +
Sbjct: 79 SVPQFQLSNYQVSVPENEPAGTRVITLKATVSD-PGETGKIEYGMEA 124
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 48/111 (43%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS+ Y V EN + T V ++A D D G N+++ YS+ G+ G F I
Sbjct: 295 NYPQFSEKRYVVQVPENVAVNTKVAQVEATDRD-EGNNARVHYSIISGNVKGQFFIH--- 350
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PT I V+ LD E YNL ++A D G PP
Sbjct: 351 -------TPTGA----------IDVINPLDYETIR-EYNLRIKAQDGGRPP 383
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F++ +Y + E+ +GT V+T+ A D D +NS ++Y + G+ F I ++
Sbjct: 506 NIPTFTEKMYSLKINEDAVVGTSVLTVTALDRD---VNSVVTYQISSGNTRNRFAITSQS 562
>gi|432847530|ref|XP_004066068.1| PREDICTED: protocadherin-23-like [Oryzias latipes]
Length = 3252
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y+ +V E Q + T ++ + A+DAD G+N +I YS+ G+ G F +D+ G
Sbjct: 2127 NAPQFEHSSYKTSVWEGQVLNTYIMQVFASDAD-SGVNGQIEYSILSGNNNGAFILDSLG 2185
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I+ T + LDREI Y L L+A DKGTPP
Sbjct: 2186 G-----ILATNV---------------ALDREITS-SYKLVLQASDKGTPP 2215
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 52/108 (48%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS Y A V EN IGT ++ + A D D G+N + Y + G +N+G
Sbjct: 2553 NAPIFSSTEYHAQVSENSQIGTSLLQVSAQDPD-LGINGLVRYDIIAG--------NNKG 2603
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
LN +DP T +++ LD E P Y LT+RA D G
Sbjct: 2604 HLN--------LDPHTGL----LLINHSLDYEQDP-KYTLTIRASDAG 2638
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 17/115 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF +Y ++ E+ +G+ + + A DAD P S + YS+ G F +
Sbjct: 545 NEPVFQQQLYSVSIPEHSDVGSCFLQVVATDADTPEF-SVLLYSLSDG-----FDNADRH 598
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
PL ++ P T + + V + +DR++ P Y++ ++A D G +TY
Sbjct: 599 PL-------FQVQPHTGE----LCVSQDIDRDVGPSVYDILIKAEDPGGQSAQTY 642
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
APVFS+ +Y+A+V EN+ G V+ + A D D N+ + YS+ G G F+I+
Sbjct: 1609 APVFSEIIYEASVAENRDAGEPVVRVSATDIDSE-ENAVVWYSLLPGPGYELFSIN 1663
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF VY +V E+ P+G+ VI + A DAD G N+ + +S+ + G ID + L
Sbjct: 442 PVFEKEVYTISVAEDLPLGSSVIQMTARDAD-EGPNADVRFSILKTNQDGLIRIDPQSGL 500
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ Y+ + E TLV+T+ A D D G+N KI+Y + G++ + G
Sbjct: 2332 NAPVFTQVSYKVEMSELASAETLVLTVSATDRD-SGLNGKITYRLLSSPLQGFYIQPDTG 2390
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y ++ E+ P+G+ V + A D D G N +++Y + +
Sbjct: 224 NPPVFNQTEYHTSIHEDAPVGSFVCQIHATDPD-LGDNGRVTYEIN----------RRQS 272
Query: 62 PLNH-FRIVPTKIDPGTKKKEYNIVVL-KLLDREIAPLGYNLTLRAVDKGTPP 112
LNH F I T +V L + LD E P + L +RA D G P
Sbjct: 273 DLNHVFSINETT----------GVVYLNQKLDFETQPF-HELIIRARDNGAQP 314
>gi|170589928|ref|XP_001899725.1| Cadherin domain containing protein [Brugia malayi]
gi|158592851|gb|EDP31447.1| Cadherin domain containing protein [Brugia malayi]
Length = 4483
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 52/109 (47%), Gaps = 24/109 (22%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+F D +ATV EN P+ T V LKA D D P M + Y+V GDG+ F ID+EG
Sbjct: 918 PLFDDIAREATVYENVPLWTEVFALKAVDPDSPEM--PVKYTVIDGDGISSFIIDSEG-- 973
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I+ T I +LDRE A Y LT+ A D P
Sbjct: 974 ----ILRTSI---------------VLDRE-ACDSYWLTIEACDMNPVP 1002
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 25/111 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F +Y+A V EN GT V+ + A D D ++SYS+ D +G FTI+ +G
Sbjct: 3220 NPPLFMQHIYRAMVLENMQRGTKVVQVLANDPDSEHF-GRVSYSI-TNDAVG-FTIEEDG 3276
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I ++LDRE+ Y L ++AVD GTPP
Sbjct: 3277 W---------------------ITTTEMLDREVKS-TYRLIVKAVDGGTPP 3305
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N P F + + E+ PIG+ + ++A D D G+NSK+ Y + G+ F +D E
Sbjct: 2708 NKPRFEITSERVVISEDLPIGSSITIIRAVDEDAVGLNSKVQYFLEEGNNSSTFKLDQET 2767
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVV 86
G L+ F+ V ++ +EY ++V
Sbjct: 2768 GWLSLFKEVDREV-----IEEYALIV 2788
Score = 35.4 bits (80), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 24/126 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG-- 61
P F Y T+ + P+GT V+T++A D+D +S I YS+ G+ G+F I+
Sbjct: 1445 PKFVVSEYFTTISTSLPVGTPVLTVRAYDSD----HSSIQYSIIEGNEDGHFAINEYSGE 1500
Query: 62 -------PLNHFR---IVPTKIDPGTKKKEYNIVVLKLLDREIAPL-----GYNLTLRAV 106
NH R IV I + + V + +L+ ++ + Y+LT V
Sbjct: 1501 IRTSQLISYNHERTTLIVQASIQKNSSLTDRCSVRINILNDDLGRVNFPQPSYSLT---V 1557
Query: 107 DKGTPP 112
+ TPP
Sbjct: 1558 HESTPP 1563
>gi|119587286|gb|EAW66882.1| hCG1642212, isoform CRA_b [Homo sapiens]
Length = 1118
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F+ID+E
Sbjct: 1038 LHTPYFPDFAVVGSVKENSRIGTSVLQVTARDED-SGRDGEIQYSIRDGSGLGRFSIDDE 1096
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F +Y A V E+ P+GT V+T+ A+D D G N I+YS+ + L +
Sbjct: 468 HTPEFQQPLYDAYVNESVPVGTSVLTVSASDKD-KGENGYITYSIASLNLLPFV------ 520
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 521 -INQFTGV--------------ISTTEELDFESSPEIYRFIVRASDWGSPYRH 558
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 16/78 (20%)
Query: 37 GMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIA 95
G N +I S S+ GD L F + EG EY I K +D E
Sbjct: 293 GANGEIESVSIVAGDPLDQFFLAKEGKW---------------LNEYKIKERKQIDWESF 337
Query: 96 PLGYNLTLRAVDKGTPPR 113
P GYNLTL+A DKG+P +
Sbjct: 338 PYGYNLTLQAKDKGSPQK 355
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 24/110 (21%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFR 67
F VKE+ P+G ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 729 FPSDVAVKEDLPVGANILKIKAYDAD-SGFNGKVLFTISDGNTDSCFNIDMETGQLK--- 784
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 785 ------------------VLMPMDREHTDL-YLLNITIYDLGNPQKSSWR 815
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F ID
Sbjct: 933 SPAFIPSSYSVKVLEDLPVGTVIAWLETHDPD-LGLGGQVRYSLV-NDYNGRFEID---- 986
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 987 ----------------KASGAIRLSKELDYEKQQF-YNLTVRAKDKGRP 1018
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---------RGGDGL 52
N+PVF Y + E+ IGT +I ++A D D G N +++YSV G+
Sbjct: 827 NSPVFIQDSYSVNILESSGIGTEIIQVEARDKD-LGSNGEVTYSVLTDTQQFAINSSTGI 885
Query: 53 GYFT--IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLL 90
Y +D E N+ + + + ++ +++V LK+
Sbjct: 886 VYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVF 925
>gi|426370103|ref|XP_004052012.1| PREDICTED: protocadherin Fat 3-like [Gorilla gorilla gorilla]
Length = 969
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F+ID+E
Sbjct: 888 LHTPYFPDFAVVGSVKENSRIGTSVLQVTARDED-SGRDGEIQYSIRDGSGLGRFSIDDE 946
Query: 61 G 61
Sbjct: 947 S 947
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F +Y A V E+ P+GT V+T+ A+D D G N I+YS+ + L +
Sbjct: 318 HTPEFQQPLYDAYVNESVPVGTSVLTVSASDKD-KGENGYITYSIASLNLLPFV------ 370
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 371 -INQFTGV--------------ISTTEELDFESSPEIYRFIVRASDWGSPYRH 408
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 16/78 (20%)
Query: 37 GMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIA 95
G N +I S S+ GD L F + EG EY I K +D E
Sbjct: 143 GANGEIESVSIVAGDPLDQFFLAKEGKW---------------LNEYKIKERKQIDWESF 187
Query: 96 PLGYNLTLRAVDKGTPPR 113
P GYNLTL+A DKG+P +
Sbjct: 188 PYGYNLTLQAKDKGSPQK 205
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 24/110 (21%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFR 67
F VKE+ P+G ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 579 FPSDVAVKEDLPVGANILKIKAYDAD-SGFNGKVLFTISDGNTDSCFNIDMETGQLK--- 634
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 635 ------------------VLMPMDREHTDL-YLLNITIYDLGNPQKSSWR 665
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F ID
Sbjct: 783 SPAFIPSSYSVKVLEDLPVGTVIAWLETHDPD-LGLGGQVRYSLV-NDYNGRFEID---- 836
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 837 ----------------KASGAIRLSKELDYEKQQF-YNLTVRAKDKGRP 868
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---------RGGDGL 52
N+PVF Y + E+ IGT +I ++A D D G N +++YSV G+
Sbjct: 677 NSPVFIQDSYSVNILESSGIGTEIIQVEARDKD-LGSNGEVTYSVLTDTQQFAINSSTGI 735
Query: 53 GYFT--IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLL 90
Y +D E N+ + + + ++ +++V LK+
Sbjct: 736 VYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVF 775
>gi|224067665|ref|XP_002195148.1| PREDICTED: protocadherin Fat 2 [Taeniopygia guttata]
Length = 4428
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 66/117 (56%), Gaps = 11/117 (9%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P FS Y+A V ++ +GT VI ++A D D G N++I YS++ G+G G+F+ID
Sbjct: 1553 LHPPQFSSIHYEAEVLDSAVVGTEVIQVRALDQDQ-GANAEIRYSLQAGNGEGFFSID-- 1609
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLT----LRAVDKGTPPR 113
P + V K+DP ++E +++K D+ L + T +R D+ TPP+
Sbjct: 1610 -PYSGIVTVAQKLDPS--RQERFTLIVKAEDQGFPQLKDSATVHVHIRPSDR-TPPK 1662
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 55/112 (49%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F Y ++E+ IG +++T+ A D D MN++I+YS+ G+
Sbjct: 3322 HAPEFIQDPYFTDIREDAAIGEIILTVSADDLDG-SMNNQITYSIVEGN----------- 3369
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
PL HF I P K I + K LDRE P Y LT+RA D G P +
Sbjct: 3370 PLGHFAIQP---------KNGQISIAKHLDREEIP-SYALTVRATDNGHPAQ 3411
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+N P F+ F+++ V+EN P GT V+ + A D D G + ++ Y +R G GL F I+
Sbjct: 1029 LNPPRFASFIFKGWVQENSPKGTSVMMVTAKDID-RGKDGEVQYFLREGTGLSVFHIEK- 1086
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
D GT I + LDRE Y LT+ A+D GT P
Sbjct: 1087 -------------DTGT------IRTIGSLDRE-GTSHYWLTVLALDLGTIP 1118
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 26/115 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y EN P GT V+T+KA D D +G +G ++I N+
Sbjct: 457 HAPSFTQSSYHGAFDENVPPGTSVLTVKATDED------------KGDNGFVTYSIANQ- 503
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVL--KLLDREIAPLGYNLTLRAVDKGTPPRE 114
+ VP IDP Y+ V+ K +D E+ Y+L + A D G+P R
Sbjct: 504 -----KSVPFVIDP------YSGVIFTSKSMDYELMQRWYHLRVWASDWGSPFRH 547
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAP F+ Y+ +V EN G +++TL DAD N +++ + GD LG FT++
Sbjct: 2905 NAPQFTSDFYKGSVIENAEPGQVIVTLSTIDADISEQNRRVTCYITEGDILGQFTVEQ 2962
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 48/113 (42%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR--GGDGLGYFTIDN 59
N P+FS +Y A+V E+ P T V+ L A+D D G N +SY + G D +F ID
Sbjct: 2271 NPPIFSQIIYTASVSESLPPQTPVVQLFASDKD-SGRNKVVSYQIMDDGSDAAKFFNID- 2328
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+I + LD E + + +RA D G PP
Sbjct: 2329 -------------------ASTGHITTAQALDYETNQ-QFRMKVRAADHGVPP 2361
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG--LGYFTIDN 59
N PVF Y+A V EN P GT VI + A D D G +++YS+ G G FTID
Sbjct: 2797 NRPVFEADPYRAFVMENMPSGTTVIQVTANDQD-TGSAGQVTYSLEAESGNLRGLFTIDG 2855
Query: 60 EG 61
E
Sbjct: 2856 ES 2857
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+P F VY+A + EN IGT VI L A D D G I Y++ F+IDN+G
Sbjct: 2481 SPTFQQNVYEAELAENAEIGTKVIELLAIDPD-GGPYGTIDYTIINKLAHEKFSIDNKG 2538
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y V+EN P+GT V+ L +D D P S+ + G+ F + G
Sbjct: 3427 NPPRFFQLNYSVVVQENAPVGTSVLELIMSDRDSPENGPPYSFQITQGNDGKAFEVTQNG 3486
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG 98
L ++ ++ KE ++ +++ D I PL
Sbjct: 3487 LLVTSSVLNRRM------KEQYLLQVQVSDSGIPPLS 3517
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN-E 60
N P FS Y+A V E G +VI ++A D D G +++ Y + G+ +F I++
Sbjct: 2378 NPPEFSQLQYEAKVSEMATCGHIVIKVQALDPD-SGDTTRLEYVILSGNDNRHFAINSTS 2436
Query: 61 GPLNHFRIVPTKIDPG 76
G ++ F ++P
Sbjct: 2437 GIISMFNRCKKDLEPS 2452
Score = 35.0 bits (79), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
P+FS Y+ +++E+ P+ T++ TL A DAD G N++ Y++ L FT+
Sbjct: 149 PLFSPPSYKVSIREDTPLKTVISTLSATDAD-AGQNAEFYYALSTKSNL--FTV 199
>gi|47215506|emb|CAG01168.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1122
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 56/112 (50%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
NAP F +YQ TV E+ P+ T V+ + A+D D N ++SY+ +GG DG G F I+
Sbjct: 811 NAPQFLRDMYQGTVLEDAPVFTSVLQISASDRD-SSTNGRVSYTFQGGDDGEGDFIIETY 869
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I + + LDRE P+ YNL AVD+G PP
Sbjct: 870 SGI--------------------IRIARKLDRENVPV-YNLKAFAVDRGVPP 900
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL-GYFTIDNE 60
++PVF Y+ +++EN +G V+T++A D D P N+ + Y + DG+ F ID+
Sbjct: 329 HSPVFEQNEYRVSIRENVEVGFEVMTIRATDGDAPS-NANMVYKIVNDDGVNSVFEIDSR 387
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVV 86
L R P + K Y ++V
Sbjct: 388 NGLVRIRERPDR----ETKDRYQLIV 409
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF V V+EN P+G++V + A D D G N++I Y + G+ F +D
Sbjct: 917 NAPVFEKDVLFIDVEENSPVGSVVARITATDPD-EGSNAQIMYQIVEGNIPEVFQLD--- 972
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
N + T +D T +KEY IVV
Sbjct: 973 IFNGDLVSLTDLDYET-RKEYTIVV 996
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF YQ T+ E++P+GT V+ + A D D G N++I+Y + D + F ID
Sbjct: 710 PVFQSANYQVTLSEDRPVGTTVMAISATDED-TGENARITYVME--DNVPQFKID 761
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS Y V EN + T +I ++A D D G N+K+ YS+ G+ G F I +
Sbjct: 437 NYPQFSKKRYVVQVPENVAVNTKIIQVEATDQD-EGNNAKVHYSIISGNIRGQFYIHS-- 493
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PT + I ++ LD E+ Y+L ++A D G PP
Sbjct: 494 --------PTGV----------IDIINPLDYEMIR-EYSLRIKAQDGGRPP 525
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 14/120 (11%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+F +QATV EN P+G VI ++A D D G N+++ Y + FTI+N
Sbjct: 545 PMFVSTPFQATVLENVPVGYSVIHIQAIDGD-SGENARLEYRLIDTTPGFPFTINNS--- 600
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYN-LTLRAVDKGTPPRETYKATPRN 122
+ V ++D +K Y++ + E A +G + LT+ AVD+ TY+ + N
Sbjct: 601 TGWITVSDELD----QKVYSLKI-----NEDAIVGTSVLTVTAVDRDVNSVVTYQISSGN 651
>gi|307194561|gb|EFN76853.1| Cadherin-related tumor suppressor [Harpegnathos saltator]
Length = 3259
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 56/112 (50%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQ-PIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAPVF D Y A V EN P G VI +KA DAD P N ++ Y ++ E
Sbjct: 516 NAPVFLDSPYIAHVMENMVPPGGFVIQVKAYDADTPPYNDQVRYFLK------------E 563
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G + FRI + D I +L+ LDRE+ Y LTL A+D G+PP
Sbjct: 564 GDTDLFRINASTGD---------IFLLRPLDREVMS-EYTLTLVAMDTGSPP 605
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 54/118 (45%), Gaps = 23/118 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F A + EN IGT V+T+ A D D G N ++ Y+V GGD G F + + G
Sbjct: 198 NAPIFEAGPLAAEIMENATIGTPVLTVTAQDLD-SGDNGRVVYAVVGGDDDGDFVVASNG 256
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
L + +LL+RE PL YNL L A D PP +T
Sbjct: 257 TL---------------------LTHRLLNRERKPL-YNLVLSATDSPLPPARPLSST 292
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 57/122 (46%), Gaps = 22/122 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y+ TV E GT ++T++A D D N++ SYS+ GG+ F
Sbjct: 1675 PEFLQSYYETTVSEGADYGTRLLTVRAIDKDIRPQNNQFSYSIIGGNIGQAF-------- 1726
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPRNG 123
K+DP T +I K LDRE + Y+L + A+D G PP ET AT
Sbjct: 1727 --------KVDPQTG----DIETAKQLDRESMSM-YDLIIGAIDIGLPP-ETGTATVHIE 1772
Query: 124 LT 125
LT
Sbjct: 1773 LT 1774
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF Y ATV EN IG V+ + A D D G N ++ YS+ GD FTI +G
Sbjct: 407 NSPVFDPKQYSATVAENASIGASVLQVSAMDRD-EGANGRVRYSIAKGDDNRDFTISEDG 465
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F+ Y+AT+ EN P GT V L A D D G+N+KI YS+ G ++
Sbjct: 622 HSPEFARQNYKATMLENMPAGTWVTKLHATDKD-EGLNAKIRYSLFGDKVERFY------ 674
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+DP T ++ + LDRE + Y+LTL A D R T
Sbjct: 675 -----------VDPDTG----DVSTMMPLDREQTAV-YHLTLLAQDSSPTERAT 712
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI-DNE 60
N P F+ VY A + EN P+ + V + A D D P + + Y + GG+G+ +F I +N
Sbjct: 1461 NPPTFNQSVYHAYLPENSPLDSFVYKVVARDIDSPKY-AVVQYKILGGNGMDHFRIHENT 1519
Query: 61 GPL 63
G +
Sbjct: 1520 GEI 1522
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
+AP F+ YQ V EN+P+ T ++T+ A D D G N + Y + G+ F +
Sbjct: 1356 HAPTFAAVSYQVRVPENEPVNTTILTVSAVDGD-SGPNGMVRYKISAGNERNEFFV 1410
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 44/110 (40%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF V EN+P GT ++TL A D D P + SY + GG T+D
Sbjct: 1779 NGPVFDPPEVIGYVSENEPPGTSIMTLSATDPDLPPNGAPFSYRLIGGRQSNMVTLD--- 1835
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
H ++ T + LDRE P +L + D G P
Sbjct: 1836 --KHSGVLRTT---------------RSLDRETMP-QLDLVIEVEDSGIP 1867
>gi|350418958|ref|XP_003492024.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-related tumor
suppressor-like [Bombus impatiens]
Length = 4964
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 54/110 (49%), Gaps = 21/110 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y ATV E GT V+T++A D D N++ SYS+ G+ F
Sbjct: 3386 PEFLQNTYDATVSEGAAHGTRVLTVRAVDKDIKPQNNQFSYSIISGNLGQAF-------- 3437
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
K+DP T +I K LDRE P+ Y+LT+ A+D GTPP+
Sbjct: 3438 --------KVDPQTG----DIETAKQLDRETIPI-YDLTIGAIDTGTPPQ 3474
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 56/113 (49%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQ--PIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D Y A V EN P G VI +KA DAD P N ++ Y ++ GD
Sbjct: 2262 NAPVFLDSPYLAHVMENMVPPGGGFVIQVKAYDADTPPYNDQVRYFLKEGD--------- 2312
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ FRI + D I +L+ LDRE+ Y LTL A+D G+PP
Sbjct: 2313 ---TDLFRINASTGD---------IFLLRPLDRELVA-EYTLTLVAMDTGSPP 2352
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 51/111 (45%), Gaps = 23/111 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F + A + EN IGT ++++ A D D G N ++ Y+V GGD G F + G
Sbjct: 1944 NAPIFEAGPHAADIVENTTIGTPILSVAAQDLD-SGDNGRVIYAVAGGDENGDFGVAPNG 2002
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L KLLDRE PL YNL L A D PP
Sbjct: 2003 TL---------------------FTRKLLDREQKPL-YNLILSATDSPLPP 2031
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 20/101 (19%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
ATV EN ++V + D D G+N + + +R G+ LG+F +DN + R
Sbjct: 340 ATVDENAAKDSIVAAVAVIDNDE-GLNGETTVEIRAGNELGHFRLDNTPSFDIVR----- 393
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
V LDRE P YNLT+ A DKGTPPR
Sbjct: 394 -------------VNGRLDREEIP-KYNLTVVATDKGTPPR 420
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF Y A + E P G+ V ++ A DAD G+N++I Y G+ G+F ID +
Sbjct: 436 HEPVFQQSEYSAVLSELSPTGSFVASISATDAD-SGLNARIYYDFDSGNEQGWFAIDQDT 494
Query: 62 PL 63
L
Sbjct: 495 GL 496
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF Y ATV EN IG V+ + A D D G N ++ Y + GD FTI +G
Sbjct: 2153 NSPVFDPRQYSATVAENASIGASVLQVSAMDRD-EGANGRVRYGIAMGDDNRDFTISEDG 2211
Score = 42.7 bits (99), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 20/113 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y V EN +G V+ L A D G+N++ISY + +G YF+ID +
Sbjct: 2997 NAPRFDQRSYLYPVPENYGVGKRVVQLTAKDDADFGVNAEISYFMTNVNGTEYFSIDEKS 3056
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+ R + + T + L ++A+DKG PP++
Sbjct: 3057 GWVYVRNTLSNVPVRTT--------------------FLLKVQAIDKGVPPQK 3089
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 47/118 (39%), Gaps = 22/118 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ V E IGT ++ + DAD G+N + YS+ G+ G F ID
Sbjct: 1179 NIPQFQRLPYKVQVNEGAAIGTQLLRVYTTDAD-EGLNGDVFYSLEDGNQHGRFAID--- 1234
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I + K LDRE Y LT+ A D G R + T
Sbjct: 1235 -----------------EATGQISLTKELDRETTD-AYVLTVVAHDAGLETRLSSSTT 1274
Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
+AP F+ +Q V EN+P+ T ++T+ A D D G N I Y + G+ F +
Sbjct: 3104 HAPTFAAVSHQVRVPENEPVNTTILTVSATDGD-DGPNGMIRYKISAGNEKNEFFV 3158
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F Y V EN P G+ + + A DAD G NS++SY++
Sbjct: 1838 NAPTFQSTAYSFDVPENVPRGSRIGQVVATDADANGPNSQLSYTL 1882
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF + Y + E+ P GT V + A DAD N+++ YS+ G G G FT+D
Sbjct: 649 NSPVFYPWRYLMPIPEDAPPGTSVGKVTATDADAR-ENAQVRYSLESG-GEGLFTVD 703
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 44/110 (40%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN+P GT+V+TL A D D P + +Y + GG T+D
Sbjct: 3490 NGPTFDPPEVVGYVNENEPAGTIVMTLSATDPDLPPNGAPFTYKLVGGRQSDMVTLD--- 3546
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
H ++ T + LDRE P +L + D G P
Sbjct: 3547 --KHTGVLKTT---------------RSLDREAMP-QLDLVVEVEDSGVP 3578
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 13/114 (11%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N P+F Y + E+ P+GT V+T+ A D D NSK++Y + D FTID E
Sbjct: 208 NPPIFQQSDYVVALNESAPVGTKVLTVHATDKDSED-NSKLTYYL--PDTERQFTIDPET 264
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
G + T ++P ++ + +L D P +T+ A D G+P ++
Sbjct: 265 GTI-------TTVEPLDCPQQSCTIAARLGDG--CPKSCVITVFARDHGSPRQD 309
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
P F+ Y+ATV EN GT V A D D G+N+KI YS+ G + FT++ E
Sbjct: 2371 PEFTRQEYRATVTENLASGTWVTKPHATDKD-EGLNAKIRYSLLGENS-ERFTVEPE 2425
>gi|357614377|gb|EHJ69044.1| cadherin-like protein [Danaus plexippus]
Length = 3180
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 52/118 (44%), Gaps = 23/118 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + + E+ P+G+ V+T+ A D D G N K++YS+ GD F I + G
Sbjct: 123 NAPVFDPMSFSNEILEDVPVGSSVVTVSATDID-SGFNGKLTYSIFSGDDNQDFKISSNG 181
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
I LLDRE P+ YNL + A D PP AT
Sbjct: 182 ---------------------TIFTSSLLDRETIPI-YNLVITAKDLAKPPEPRLSAT 217
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQ--PIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P F D Y A V EN P G ++T++A DAD P N+++ Y ++ GD
Sbjct: 441 NPPTFLDTPYLAYVMENVIPPYGGYILTVQAYDADSPPFNNQVRYFIKEGDS-------- 492
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ F+I I +L+ LDRE A Y L+L A+D G+PP
Sbjct: 493 ----DLFKI---------NASSGQISLLRTLDRE-AQDEYTLSLVAMDTGSPP 531
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 56/122 (45%), Gaps = 22/122 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y+AT+ E +G VI +KA D D N++ S+S+ G+ F ID +G
Sbjct: 1602 PEFLRNYYEATISEGAQVGEEVIQVKAVDKDVRSQNNQFSFSIIDGNLNQDFKIDPQGG- 1660
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPRNG 123
+I V + LDRE Y+L + A+D G PP ET AT +
Sbjct: 1661 -------------------SIEVARNLDREKVST-YSLIIGAIDTGVPP-ETGTATVKIT 1699
Query: 124 LT 125
LT
Sbjct: 1700 LT 1701
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F + V ++ +G +I L+A D G+N++I Y++ GG+G YF+ID
Sbjct: 1181 NKPKFKEHEDLVPVPQDATVGEKIIQLQAEDNLDFGINAEIEYNIFGGNGTTYFSIDK-- 1238
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
LN + I+ + +Y Y++ ++A+D+G PP+
Sbjct: 1239 -LNGWIIIGKQF---YYTGQY----------------YHIKVKAIDRGVPPQ 1270
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 24/114 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F+ YQ V EN+PIG+ +++L A D D G N + Y++ G+ F
Sbjct: 1287 SPRFTALSYQVIVPENEPIGSPILSLDAKDED-EGPNGIVRYTITSGNEEKEF------- 1338
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLD-REIAPLGYNLTLRAVDKGTPPRET 115
K+DP T I +L+ LD EI Y L + A D G P+ET
Sbjct: 1339 ---------KVDPVTG----TISILRSLDYDEIQE--YRLNITAKDLGFKPKET 1377
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N+PVF Y A+V EN IG V+ + A D D G+N ++ YS+ GD F+I +
Sbjct: 335 NSPVFDPKQYSASVPENASIGASVLQVSATDVD-EGINGRVRYSIASGDENRDFSISED 392
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 46/114 (40%), Gaps = 20/114 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F +Y+ + E G V +KA D D G N KI Y ++G
Sbjct: 653 NTPTFPQSLYEVYISERTVQGDFVFGVKAKDNDI-GDNKKIVYDIKG------------- 698
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
H + D G K + N++ K R +NL + A D GT PRE+
Sbjct: 699 --EHHSLFTINKDTGVIKAKENLMKYKDKMRST----FNLIILATDSGTFPRES 746
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PV + V EN+P T + TL A D D P + +Y++ GG Y +
Sbjct: 1706 NGPVIDTASFNGAVYENEPPNTSITTLSANDPDLPPNGAPFTYAIIGGRHENYVKV---- 1761
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+K ++ K +DRE+ P ++ ++ D GTP
Sbjct: 1762 ----------------QKHTGVLLTNKRIDRELTPY-LDIVIQVEDSGTP 1794
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y A + EN P + + +KA D D P N+ I Y ++ + F+ID
Sbjct: 1391 NAPQFNQSQYVAYLTENSPAKSFIFKVKATDIDSP-KNAIIKYYIK-NEMSALFSIDE-- 1446
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVL 87
N I ++ +K YN+ +L
Sbjct: 1447 --NSGDIFSNEVFDFEEKTVYNLQIL 1470
>gi|156365973|ref|XP_001626916.1| predicted protein [Nematostella vectensis]
gi|156213809|gb|EDO34816.1| predicted protein [Nematostella vectensis]
Length = 471
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y A V E GT VI + A + D G +SKI+Y++ GD
Sbjct: 373 NNPTFTKAAYTAHVSEEATAGTNVIMVNATERDS-GKDSKITYNISAGD----------- 420
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
PL+HF I I V K LDRE L Y L + A D GTPPR
Sbjct: 421 PLDHFAI---------NHLTGQISVRKALDRETTSL-YTLLVSARDGGTPPR 462
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F F Y +V+E++ +GT V+ ++A D D G+ +I +++ GGD G F+I N
Sbjct: 164 NAPRFLKFTYSGSVREDRTVGTEVVQVQATD-DDDGLAGEIVFAITGGDPEGLFSILN-- 220
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
T K I V + LDRE+ Y LT+ A D+ P+ T
Sbjct: 221 ---------------TSGK---ITVARSLDREMKAT-YELTVTATDRAGDPKST 255
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 51/118 (43%), Gaps = 30/118 (25%)
Query: 2 NAPVFSDFVYQATVKENQP-------IGTLVITL-KAADADPPGMNSKISYSVRGGDGLG 53
NAPVF Y + E+ P +G V+ L K D D G N +ISYS+ G+ G
Sbjct: 50 NAPVFKKQSYVVEMVEHSPTTFTVVKVGEKVVFLIKTTDRDV-GSNGRISYSIVSGNVDG 108
Query: 54 YFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
F ID+ + V+ L+DRE P GY+L + A D G P
Sbjct: 109 AFVIDSSSVIR---------------------VVALVDREAHPAGYSLLVVARDHGYP 145
>gi|38146367|gb|AAR11556.1| fat3-like [Gallus gallus]
Length = 139
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+ P F DF +VKE+ IGT V+ + A D D G + +I YS+R G GLG F+ID E
Sbjct: 37 LYTPYFPDFAVIGSVKESSRIGTSVLQVVAQDEDS-GRDGEIQYSIRDGSGLGRFSIDEE 95
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I +LDRE Y LT+ A D G P
Sbjct: 96 TGV--------------------IYTADVLDRETTK-SYWLTVYATDHGVVP 126
>gi|345479135|ref|XP_001602595.2| PREDICTED: cadherin-related tumor suppressor-like [Nasonia
vitripennis]
Length = 4967
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 21/110 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F +Y+A+V E + +G+ ++T++A D D N++ SYS+ GG+ F
Sbjct: 3386 PEFLQTLYEASVSEGESVGSRIVTVRAIDKDVRPQNNQFSYSIIGGNVGQAF-------- 3437
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
K+DP + +I K LDRE P Y L + A+D G+PP+
Sbjct: 3438 --------KVDP----QSGDIETAKFLDRESVP-SYELIIGAIDTGSPPQ 3474
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 56/113 (49%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQ--PIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D Y A V EN P G V+ +KA DAD P N ++ Y ++ GD
Sbjct: 2258 NAPVFLDSPYLAHVMENMLPPGGGFVMQVKAYDADTPPYNDQVRYFLKEGD--------- 2308
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ FRI + D I +L+ LDRE+ Y LTL A+D G+PP
Sbjct: 2309 ---TDLFRINASTGD---------IFLLRPLDRELVS-EYVLTLVAMDTGSPP 2348
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 21/102 (20%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
ATV EN ++V + D D G+N + + +R G+ LG+F +
Sbjct: 339 ATVDENAAKDSIVAAVGIIDNDE-GLNGETTVEIRAGNELGHFQL--------------- 382
Query: 73 IDPGTKKKEYNIV-VLKLLDREIAPLGYNLTLRAVDKGTPPR 113
G + ++IV V LDRE P+ YNLT+ A DKG+PPR
Sbjct: 383 ---GHNTQNFHIVRVNGKLDREEIPM-YNLTIVATDKGSPPR 420
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF Y A + E PIG+ V ++ A DAD G+N++I Y G+ +F ID +
Sbjct: 436 HEPVFQQSEYSAVLSELSPIGSFVASISATDAD-SGLNARIYYDFESGNEQNWFAIDQDT 494
Query: 62 PL 63
L
Sbjct: 495 GL 496
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 47/111 (42%), Gaps = 23/111 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F A + EN IG++V++ A+D D G N + YS+ GD F I N G
Sbjct: 1938 NTPIFEAGPRSAELMENATIGSVVLSASASDLD-SGDNGHVVYSIISGDEAEDFGIANNG 1996
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L +LLDRE + YNL L A D PP
Sbjct: 1997 TL---------------------YTRRLLDRENKSV-YNLVLEAADSPRPP 2025
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P+F Y A+V EN IG V+ + A D D G N ++ YS+ GD FTI +
Sbjct: 2149 NSPIFDPRQYSASVAENASIGASVLQVSALDRD-EGANGRVRYSIAAGDDNRDFTISEDA 2207
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 14/105 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID--- 58
+AP F YQ V EN+P+ T ++T+ A D+D G N + Y + G+ F+I
Sbjct: 3101 HAPTFVAVSYQVRVPENEPVNTTILTVNAVDSD-DGPNGMVRYEISAGNERHEFSIHPIT 3159
Query: 59 ---------NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREI 94
+ + +R+ T D G + K + I L +L ++I
Sbjct: 3160 GAVTILDALDYDTVQEYRLNITARDLGFESK-HAIATLTVLAKDI 3203
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 20/112 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F Y V E P + + A+D + G+N++I Y+V G+G YF ++ E
Sbjct: 2994 HAPRFEQRAYLYPVPEGYPTNKKIAQVHASDDEDFGVNAEIEYTVAAGNGSEYFFVEPES 3053
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ V L++ I ++L +RA DKG PP+
Sbjct: 3054 G-------------------WLYVNKSLVEFRIGS-AFSLKIRATDKGVPPQ 3085
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 27/45 (60%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F Y V EN P G+ V + A DAD PG NS+ISY++
Sbjct: 1832 NAPSFQATAYSFDVLENVPRGSRVGQVVANDADAPGPNSQISYAL 1876
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 21/117 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF V EN+P GT ++TL A D D P + Y + GG + +++
Sbjct: 3490 NGPVFDPTDVIGYVSENEPAGTSIMTLSATDPDLPPNGAPFFYRLIGGKQMDLVSLE--- 3546
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
H I+ T + LDREIAP +L + D G+P + + A
Sbjct: 3547 --KHSGILKTT---------------RSLDREIAP-QLDLLVEVEDSGSPRQSSEHA 3585
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 49/118 (41%), Gaps = 22/118 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ V E +GT ++ + +DAD G+N + YS+ G FTID
Sbjct: 1178 NTPQFKRLPYRVQVSEAALVGTQLLRVYTSDAD-EGLNGDVFYSLENEQHDGQFTID--- 1233
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I + + LDRE Y+LT+ A D G R + AT
Sbjct: 1234 -----------------EATGQISLARELDRETRD-NYHLTVVAHDAGIESRLSSSAT 1273
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 23/107 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F+ Y+A+V EN P G V A+D D G+N++I YS+ G + + G
Sbjct: 2365 HSPEFNRQEYRASVTENLPAGAWVANPLASDKD-EGLNARIRYSLLGDKAERFHVNSSTG 2423
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK 108
IV L+ LDRE + Y+LTL A D
Sbjct: 2424 ---------------------EIVTLERLDREQTAV-YHLTLVAQDS 2448
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 18/105 (17%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR--------------- 47
AP FS + + T+ EN P +LV TL A D D G N ++YS+
Sbjct: 542 APKFSQNIVEVTLSENTPANSLVATLSAVDND-QGTNGSVAYSLHPNVLRDYPKTFALDA 600
Query: 48 -GGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLD 91
G + T+D E + +R++ D GT + VL L+
Sbjct: 601 LTGQLMTKITLDRES-VEEYRVLVIARDQGTPPQSSTATVLLTLE 644
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF Y++++ E+ P+ L A+D D G N +I YSV G+ F I +G
Sbjct: 965 HTPVFKLTSYESSLSESTPVNERFFALLASDID-LGANGRIFYSVTDGNLENRFGIFPDG 1023
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
L V +LDRE Y L + A D+G P R +
Sbjct: 1024 QL---------------------YVKNVLDREEQDY-YALEVTASDQGNPKRSS 1055
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN-- 59
N PVF Y TV ++ GTL+ + A DAD N+++ YS+ G G G+F++D
Sbjct: 649 NPPVFYPTNYFFTVPQDATPGTLIGKVFATDADAK-ENAQVRYSLESG-GDGFFSVDERT 706
Query: 60 -----EGPLNH-----FRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGY 99
+G L F + + D G + N VV L + + L +
Sbjct: 707 GDVFLQGALRQAHKILFELTVSAKDTGDRSAVKNAVVEILREENLEQLEF 756
>gi|281337852|gb|EFB13436.1| hypothetical protein PANDA_009559 [Ailuropoda melanoleuca]
Length = 1082
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F ID+E
Sbjct: 1022 LHTPYFPDFAVVGSVKENSRIGTSVLQVAAQD-DDSGRDGEIQYSIRDGSGLGRFNIDDE 1080
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F +Y A V E+ P+GT V+ + A+D D G N I+YS+ + L +
Sbjct: 452 HTPEFQQPLYDAFVNESVPVGTSVLMVSASDKD-KGENGYITYSIASLNLLPF------- 503
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 504 AINQFTGV--------------ISTTEELDFESSPETYRFIVRASDWGSPYRH 542
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 24/110 (21%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFR 67
F VKEN P+G ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 713 FPSDVAVKENLPVGANILKIKAYDAD-SGFNGKVLFTISDGNTDSCFNIDMETGQLK--- 768
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 769 ------------------VLLPMDREHTDL-YLLNITIYDLGNPQKSSWR 799
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 42/90 (46%), Gaps = 19/90 (21%)
Query: 25 VITLKAADADPPGMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYN 83
V+T+ D G N +I S S+ GD PL+ F +V G EY
Sbjct: 268 VVTVDDLD---EGANGEIESVSIVAGD-----------PLDQFFLVK----EGRWMNEYK 309
Query: 84 IVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I K +D P GYNLTL+A DKG+P +
Sbjct: 310 IKERKKVDWGSFPYGYNLTLQAKDKGSPQK 339
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F ID
Sbjct: 917 SPAFIPSSYSVKVLEDLPVGTVIAWLETHDPD-LGLGGQVRYSLV-NDYNGRFEID---- 970
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 971 ----------------KASGAIRLSKELDYEKQQF-YNLTVRAKDKGRP 1002
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---------RGGDGL 52
N+PVF Y + E+ IGT +I ++A D D G N +++YSV G+
Sbjct: 811 NSPVFLQDSYSVNILESSSIGTEIIQVEARDKD-LGSNGEVTYSVLTDTQQFAINSSTGI 869
Query: 53 GYFT--IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLL 90
Y +D E N+ + + + ++ +++V LK+
Sbjct: 870 VYVADQLDRESKANYSLKIEARDRAESGQQLFSVVTLKVF 909
>gi|351713329|gb|EHB16248.1| Protocadherin Fat 3 [Heterocephalus glaber]
Length = 1039
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F ID+E
Sbjct: 971 LHTPYFPDFAVVGSVKENSRIGTSVLQVTAQDED-SGRDGEIQYSIRDGSGLGRFNIDDE 1029
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F +Y V E+ P+GT ++T+ A+D D G N ++YS+ + L +
Sbjct: 401 HTPEFQQALYDTFVNESVPVGTSILTVSASDKD-KGENGYVTYSIASLNLLPF------- 452
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 453 AINQFTGV--------------ISTTEELDFESSPETYRFIVRASDWGSPYRH 491
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 24/104 (23%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFRIVPTKI 73
VKEN P+G ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 668 VKENLPVGANILNIKAYDAD-SGFNGKVLFTISDGNTDSCFNIDMETGQLK--------- 717
Query: 74 DPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 718 ------------VLMPMDREHTDL-YLLNITIYDLGNPQKSSWR 748
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F ID
Sbjct: 866 SPAFIPSSYSVKVLEDLPVGTVIAWLETQDPD-LGLGGQVRYSLV-NDYNGRFEID---- 919
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 920 ----------------KASGAIRLSKELDYEKQQF-YNLTVRAKDKGRP 951
Score = 35.0 bits (79), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 39/90 (43%), Gaps = 19/90 (21%)
Query: 25 VITLKAADADPPGMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYN 83
V+T+ D G N +I S S+ GD L F + EG EY
Sbjct: 217 VVTVDDLD---EGANGEIESVSIVAGDPLDQFFLAKEGKW---------------MNEYK 258
Query: 84 IVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I K +D GYNLTL+A DKG+P +
Sbjct: 259 IKERKQVDWASFSYGYNLTLQAKDKGSPQK 288
>gi|156404209|ref|XP_001640300.1| predicted protein [Nematostella vectensis]
gi|156227433|gb|EDO48237.1| predicted protein [Nematostella vectensis]
Length = 2493
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 56/112 (50%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
N PVF Y+A V+E+ G VI + A+DAD G N++I YS GDG G FTID+
Sbjct: 642 NDPVFLKPSYEAKVREDIRPGGRVIEVSASDAD-IGKNAQIIYSFASNGDGQGTFTIDST 700
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I LK LDRE P Y LT+ A D+GTPP
Sbjct: 701 QGI--------------------IRTLKPLDRETIP-EYELTVVATDQGTPP 731
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 21/112 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F +Y A + E++ IG V+ ++A+DAD G N ++ Y + DG DN
Sbjct: 124 NGPIFERNIYAADIPEDKSIGDFVLAVRASDAD-SGSNGEVKYCILNSDG------DNSA 176
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
F I + + V+K LDRE P Y L ++A D+G PPR
Sbjct: 177 ----FSI---------GEVSGAVTVMKKLDREKVPT-YTLQVQAQDQGNPPR 214
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 22/108 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P FS VY AT++E+ P+ LV T++A D D G N ++ + + G+ + +F+I+
Sbjct: 232 PQFSKKVYSATIREDVPVNQLVTTVRATDCD-QGSNGEVFFEIVSGNDMNFFSIN----- 285
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+I+ + K+ LD E+ + +NL + A DKG P
Sbjct: 286 --------RINGEVRVKQK-------LDYEMIGV-FNLLVTAQDKGQP 317
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
+AP F Y A VKE+ +GT V+T+ A D D G N+KISYS+
Sbjct: 539 HAPEFKRRSYSAEVKEDASLGTSVLTVLATDRD-TGSNAKISYSI 582
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL---GYFTID 58
N P FS A+V E+ +GT+V T+ A+D D G N I YS+ L YF+ID
Sbjct: 16 NPPQFSRLQEDASVSEDAEVGTVVATVSASDPD-SGSNGMIRYSMSPSQNLMSATYFSID 74
Query: 59 N 59
Sbjct: 75 Q 75
>gi|321458298|gb|EFX69368.1| hypothetical protein DAPPUDRAFT_329129 [Daphnia pulex]
Length = 5030
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQA-TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+APVF +Y + E+ PIGT V+T++A D D N++ +YS+ GG+G F ID
Sbjct: 3460 DAPVFVQPIYHVLQLVESAPIGTKVVTVEAVDKDVRPPNNEFTYSILGGEGSKAFRIDPR 3519
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I + LLDRE + YN+T+ A+D+G PP+
Sbjct: 3520 SGI--------------------IETVSLLDRERQAV-YNVTVGAIDRGVPPQ 3551
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 57/118 (48%), Gaps = 23/118 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F Y + EN IG+ VIT+ A D D G N K+ YS+ GG+ +NE
Sbjct: 1977 NAPLFDPMSYSDELYENITIGSSVITVSATDQD-SGDNGKLVYSIIGGN-------ENE- 2027
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
FRI GT I+ + LDRE L YNL + A D+ PP + +T
Sbjct: 2028 ---QFRITQN----GT------IMTSQSLDRETQSL-YNLVIMATDQAKPPEKRLSST 2071
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F+ Y V+EN P TLV+ L+A DAD N I YS+ GG+G +FTID+E
Sbjct: 3250 NPPRFNQSHYDGFVRENLPPDTLVMDLEAFDAD-SAKNGIIQYSIIGGNGKDFFTIDSE 3307
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P+F+ YQ V+EN+P+G++++++ A+D D G N + Y++ G+ F
Sbjct: 3145 HTPIFTALSYQIIVQENEPLGSIIVSVTASDND-SGPNGVVHYAIVSGNEENKFL----- 3198
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
IDP T +I V LD + P + L + A D G P+
Sbjct: 3199 -----------IDPNTG----DISVANTLDFDTLP-KFTLNITATDMGFEPK 3234
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+P+F VY A+V EN IG V+ + A D D G+N ++ Y++ GGD
Sbjct: 2187 NSPLFDPKVYSASVSENATIGLSVLQVSATDLD-EGLNGRVRYTIVGGD 2234
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 46/110 (41%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF +V EN+P GT V+ L A DAD +Y++ GGD YF +D
Sbjct: 3567 NGPVFEPVHPVGSVFENEPPGTSVMILSAIDADQAPNAEPFTYTIVGGDHKDYFVVDK-- 3624
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
D G + +LDRE AP + + D GTP
Sbjct: 3625 ------------DTGVLR------TTNILDREEAP-QMTILVEIADAGTP 3655
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 57/120 (47%), Gaps = 16/120 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD---GLGYFTID 58
NAPVF ++E P+ T ++T+ A D D G+NS+I YS+ + +G T
Sbjct: 1438 NAPVFPSTAIVRQIQEGIPLNTPIVTVTAEDPD-SGLNSRIRYSLIQQEPSVLVGSSTRG 1496
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
GP HF I P D G + V++ +DRE A + LT+ A D+ P A
Sbjct: 1497 GSGP--HFAIRP---DTGV------VYVVRPIDREFADT-FRLTVVATDQAEPASNRISA 1544
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 46/110 (41%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS Y+ V E + T V + A DAD +N I Y + G+G F ID
Sbjct: 1228 NAPAFSRVPYKTQVSEGAAVDTQVFRVVATDADDQ-LNGGIFYYITEGNGDHKFRID--- 1283
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ IV+ + LDRE + Y LT+ A D G P
Sbjct: 1284 -----------------EASGQIVLNRALDRETSDR-YTLTIGARDAGLP 1315
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 48/102 (47%), Gaps = 23/102 (22%)
Query: 12 QATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPT 71
+ V EN PI T+V+ +KA D D G NS I YS+ D G FT+ GP++
Sbjct: 2093 ETAVMENIPINTVVMAIKAIDRD-EGRNSYIEYSLAPIDD-GCFTL---GPVDGL----- 2142
Query: 72 KIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ V LLDRE + Y L + A D+G P R
Sbjct: 2143 ------------LRVSALLDRE-SRANYTLHVMAYDRGLPSR 2171
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 24/111 (21%)
Query: 2 NAPVFSDFVYQATV-KENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP+F D Y A V +EN + +IT++A DAD P N ++ Y ++ GD G F ++
Sbjct: 2292 NAPIFLDSPYIAYVMEENNRLPVPIITVQAHDADSPPYN-RVRYLIKDGDK-GLFRVN-- 2347
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
GT + I VL+ LDRE Y + + A+D G P
Sbjct: 2348 ---------------GTTGE---ISVLRSLDRETQSR-YEIIVVAMDSGVP 2379
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 26/112 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F + + E P+G+ ++T +A DAD G+NS+I++S+ G+ F
Sbjct: 1333 NAPEFMHSEAKISALETLPVGSELVTFQATDAD-LGINSEIAFSIGAGNMHDTF------ 1385
Query: 62 PLNHFRIVPTKIDP--GTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+IDP GT + + K LD E+ Y+L + A D+G P
Sbjct: 1386 ----------RIDPQLGT------LYLEKHLDFEMQR-SYHLNITASDQGNP 1420
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 23/111 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P +DF ATV EN G++V + D D G N + + ++ G+ L +F ++ E P
Sbjct: 377 PATADF---ATVDENAQNGSVVAAVSVIDFDE-GANGETTVEIKAGNELVHFRLE-ETPS 431
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
H + V +LDRE YNLT+ A D G+P R+
Sbjct: 432 FHI-----------------VRVNGVLDREKIS-KYNLTIVATDSGSPARK 464
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
+ P+F Y A + E +G+ V + A D D G+NS I Y++ G+ +F ID
Sbjct: 479 HEPIFEKSEYSAVLSELVSVGSYVAGITATDED-TGINSNIFYAIVSGNDQQWFDID 534
Score = 35.8 bits (81), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 24/106 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ ++ V EN IGT VI + ++D D G+N+ +YS FT E
Sbjct: 2822 NPPRFTR-LFSVNVTENAAIGTFVIQVTSSDRD-IGVNANATYS---------FT---EN 2867
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
P FRI P N+ V ++DRE + Y L + AVD
Sbjct: 2868 PTGKFRIDPVS---------GNVTVAGVIDRE-SKEEYLLKVSAVD 2903
>gi|170048314|ref|XP_001870677.1| cadherin [Culex quinquefasciatus]
gi|167870411|gb|EDS33794.1| cadherin [Culex quinquefasciatus]
Length = 3527
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 57/110 (51%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS Y T+ E+ +GTLV + A DAD G+N KI YS ID+
Sbjct: 1867 NPPEFSLNPYSVTLPEDAEVGTLVTKIHATDAD-IGVNRKIKYSF----------IDSY- 1914
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+HFRI P D G + + K LDRE+ L YNLT+RA D+G P
Sbjct: 1915 -RDHFRIAP---DSGI------VTLSKPLDREVKAL-YNLTVRATDQGKP 1953
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 49/109 (44%), Gaps = 22/109 (20%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F Y V ENQ G LV T+KA D D G ++SYS+ + YF+ID
Sbjct: 1243 LHNPAFEHMFYDVKVNENQLAGRLVTTVKATDKD-FGEYGRLSYSIISDEIQEYFSID-- 1299
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
K++ IV K LDRE L Y + + AVD G
Sbjct: 1300 ------------------KEKGEIVTKKRLDREQKKL-YEVPIMAVDAG 1329
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y A+V E +G+ ++ + A D G+N++I+YS+ GG+ F ++N
Sbjct: 1971 NPPEFTSKHYFASVPEINSVGSEILKVLATSKDT-GINAEINYSIIGGNEHRKFAMNNRT 2029
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ + + LD E A Y LT++AVD GTPP
Sbjct: 2030 GI--------------------LSLADTLDYERAK-DYFLTIQAVDGGTPP 2059
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ Y A V+E++ IG ++ + DAD + ++ R G+ G F I+ +G
Sbjct: 2181 NPPIFTIQNYTAVVQEDKQIGYTLLKFEVTDADSAPNAAPYTFDFRSGNDGGAFRIEQDG 2240
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I+ T +K K+ Y L +R D G PP
Sbjct: 2241 ------ILRTATRFNSKIKD----------------SYQLQIRVFDNGAPP 2269
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y A ++E+ G ++ ++A D D N ++SY + GD +G F I+ E
Sbjct: 2076 NPPQFTQNSYTARIREDAQKGDKILQVRANDMDAEE-NGRVSYKIERGDRMGQFAIEPET 2134
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
I V LDRE + Y L ++A D G P Y
Sbjct: 2135 GY--------------------ISVAGTLDRE-SISNYVLEVQARDNGLPTLTAY 2168
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
+AP F+ + Q V E +GT V+ + A D D G N++I+YS+ G+ F ID
Sbjct: 297 HAPEFTSKIVQGKVYETATVGTRVVQVYAIDRD-IGDNARITYSIVSGNIGNVFNID 352
>gi|340708971|ref|XP_003393090.1| PREDICTED: cadherin-related tumor suppressor-like [Bombus terrestris]
Length = 5085
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 56/113 (49%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQ--PIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D Y A V EN P G VI +KA DAD P N ++ Y ++ GD
Sbjct: 2345 NAPVFLDSPYLAHVMENMVPPGGGFVIQVKAYDADTPPYNDQVRYFLKEGD--------- 2395
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ FRI + D I +L+ LDRE+ Y LTL A+D G+PP
Sbjct: 2396 ---TDLFRINASTGD---------IFLLRPLDRELVA-EYTLTLVAMDTGSPP 2435
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 54/110 (49%), Gaps = 21/110 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y ATV E GT V+T++A D D N++ SYS+ G+ F
Sbjct: 3506 PEFLQSTYDATVSEGATHGTRVLTVRAVDKDIKPQNNQFSYSIISGNLGQAF-------- 3557
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
K+DP T +I K LDRE P+ Y+LT+ A+D G+PP+
Sbjct: 3558 --------KVDPQTG----DIETAKQLDRETIPI-YDLTIGAIDTGSPPQ 3594
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 51/111 (45%), Gaps = 23/111 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F + A + EN IGT ++++ A D D G N ++ Y+V GGD G F + G
Sbjct: 2027 NAPIFEAGPHAADIVENTTIGTPILSVAAQDLD-SGDNGRVIYAVAGGDENGDFGVAPNG 2085
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L KLLDRE PL YNL L A D PP
Sbjct: 2086 TL---------------------FTRKLLDREQKPL-YNLILSATDSPLPP 2114
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 20/101 (19%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
ATV EN ++V + D D G+N + + +R G+ LG+F +DN + R
Sbjct: 406 ATVDENAAKDSIVAAVAVIDNDE-GLNGETTVEIRAGNELGHFRLDNTPSFDIVR----- 459
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
V LDRE P YNLT+ A DKGTPPR
Sbjct: 460 -------------VNGRLDREEIP-KYNLTVVATDKGTPPR 486
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF Y A + E P G+ V ++ A DAD G+N++I Y G+ G+F ID +
Sbjct: 502 HEPVFQQSEYSAVLSELSPTGSFVASISATDAD-SGLNARIYYDFDSGNEQGWFAIDQDT 560
Query: 62 PL 63
L
Sbjct: 561 GL 562
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF Y ATV EN IG V+ + A D D G N ++ YS+ GD FTI +G
Sbjct: 2236 NSPVFDPRQYSATVAENASIGASVLQVSAMDRD-EGANGRVRYSIAMGDDNRDFTISEDG 2294
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 20/113 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y V EN +G V+ L A D G+N++ISY + +G YF+ID +
Sbjct: 3080 NAPRFDQRSYLYPVPENYGVGKRVVQLMAKDDADFGVNAEISYFMTNVNGSEYFSIDEKS 3139
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+ R + + T + L ++A+DKG PP++
Sbjct: 3140 GWVYVRNTLSNVPVRTT--------------------FLLKVQAIDKGVPPQK 3172
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 47/118 (39%), Gaps = 22/118 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ V E IGT ++ + DAD G+N + YS+ G+ G F ID
Sbjct: 1245 NIPQFQRLPYRVQVNEGAAIGTQLLRVYTTDAD-EGLNGDVFYSLEDGNQHGRFAID--- 1300
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I + K LDRE Y LT+ A D G R + T
Sbjct: 1301 -----------------EATGQISLTKELDRETTD-AYVLTVVAHDAGLETRLSSSTT 1340
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 51/117 (43%), Gaps = 27/117 (23%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGY---FTIDN 59
AP FS V + T+ EN P +LV TL A D D G N ++YS Y F +D
Sbjct: 608 APRFSQNVVRVTLSENTPPQSLVATLTAVDND-QGTNGSVAYSFHSSVSRDYPKTFALDG 666
Query: 60 -EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
G L TK++ LDRE Y + + A D+GTPP+ +
Sbjct: 667 LTGQLT------TKVN---------------LDRETTA-EYQILVIAKDQGTPPQSS 701
Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
+AP F+ +Q V EN+P+ T ++T+ A D D G N I Y + G+ F +
Sbjct: 3187 HAPTFAAVSHQVRVPENEPVNTTILTVSATDGD-DGPNGMIRYKISAGNEKNEFFV 3241
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F Y V EN P G+ + + A DAD G NS++SY++
Sbjct: 1921 NAPTFQSTAYSFDVPENVPRGSRIGQVVATDADANGPNSQLSYTL 1965
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF + Y + E+ P GT V + A DAD N+++ YS+ G G G FT+D
Sbjct: 715 NSPVFYPWRYLMPIPEDAPPGTSVGKVTATDADAR-ENAQVRYSLESG-GEGLFTVD 769
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 44/110 (40%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN+P GT+V+TL A D D P + +Y + GG T+D
Sbjct: 3610 NGPTFDPPEVVGYVNENEPAGTIVMTLSATDPDLPPNGAPFTYKLVGGRQSDMVTLD--- 3666
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
H ++ T + LDRE P +L + D G P
Sbjct: 3667 --KHTGVLKTT---------------RSLDREAMP-QLDLVVEVEDSGVP 3698
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 13/114 (11%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N P+F Y + E+ P+GT V+T+ A D D NSK++Y + D FTID E
Sbjct: 274 NPPIFQQSDYVVALNESAPVGTKVLTVHATDKDSED-NSKLTYYL--PDTERQFTIDPET 330
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
G + T ++P ++ + +L D P +T+ A D G+P ++
Sbjct: 331 GTI-------TTVEPLDCPQQSCTIAARLGDG--CPKSCVITVFARDHGSPRQD 375
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N P F+ +Y+A + EN P + V + A D D P + I Y + GG G +F I
Sbjct: 3292 NPPTFNQSIYEAYLPENSPPDSFVYKVIARDIDSPKY-AVIQYKILGGTGKDHFRI 3346
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
P F+ Y+ATV EN GT V A D D G+N+KI YS+ G + FT++ E
Sbjct: 2454 PEFTRQEYRATVTENLASGTWVTKPHATDKD-EGLNAKIRYSLLGENS-ERFTVEPE 2508
>gi|351707763|gb|EHB10682.1| Protocadherin Fat 2 [Heterocephalus glaber]
Length = 4349
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 53/110 (48%), Gaps = 24/110 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GP 62
P F +Y V EN +G +++T+ A D D P +NS I+YS+ GG+ LG+F + E G
Sbjct: 3323 PQFPKDLYSTRVLENAIVGDVILTVTATDEDGP-LNSAITYSLVGGNQLGHFAVHPEKGA 3381
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L V K LD E P Y+L LRA D G PP
Sbjct: 3382 LQ---------------------VAKALDWEQTP-SYSLKLRATDSGQPP 3409
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ FVYQ V+E+ P GT V+ + A D D G++ ++ Y +R G L F+ID +
Sbjct: 1024 LHPPRFASFVYQGQVQEDSPPGTQVMQVTAHD-DDSGLDGELQYFLRAGTSLAAFSIDPD 1082
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I LDRE P Y LT+ AVD+G+ P
Sbjct: 1083 TGM--------------------IQTQAALDRESIPY-YWLTVLAVDRGSVP 1113
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 48/110 (43%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP+F Y+ TV EN P GT V+T+ A D D G N ++YS+ G
Sbjct: 451 HAPIFHRSSYEGTVDENIPPGTSVLTVTATDWD-LGENGYVTYSITGP------------ 497
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ VP IDP I K +D E+ Y +RA D G P
Sbjct: 498 -----KAVPFSIDPFLGV----ISTSKPMDYELMRRIYTFRVRASDWGAP 538
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 49/113 (43%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P FS VY +V E P T VI L A+D D G N +SY + G D +F I+
Sbjct: 2265 NPPTFSQLVYTTSVSEGLPAHTPVIQLLASDQD-SGQNRDVSYQIVEDGSDVSTFFQING 2323
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I L+ LD E A +++ +RA+D+G PP
Sbjct: 2324 STG--------------------EIFTLQELDYE-AQQHFHVKVRAMDRGDPP 2355
Score = 42.0 bits (97), Expect = 0.085, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 30/60 (50%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y +V EN G LV TLK DAD N +++ + GD LG F I G
Sbjct: 2902 NAPQFVSEDYTGSVVENSEPGELVATLKILDADISEQNRQVTCYITEGDPLGQFGIHQAG 2961
Score = 35.8 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N P S V+ ++E+ P+GT V+ L A D D K+++++ G+ +G F I
Sbjct: 1130 NPPRMSRPVFYPCIREDAPLGTSVLQLDAWDPDSSS-RGKLTFNITSGNHMGMFVI 1184
Score = 35.8 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTID 58
N P+F Y+A + EN P GT VI + A D D G + ++SY + +G + F ID
Sbjct: 2793 NRPIFEADPYKAFLTENMPGGTTVIQVTANDED-TGNDGQVSYRLSMEQGSNVHELFAID 2851
Query: 59 NE 60
+E
Sbjct: 2852 SE 2853
Score = 35.4 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 28/62 (45%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y V+EN IG+ V+ L +D D P S+ + G+ F + EG
Sbjct: 3426 NPPRFFQLNYSTAVQENSAIGSKVLQLILSDPDSPENGPPYSFRITKGNDGSTFRVTPEG 3485
Query: 62 PL 63
L
Sbjct: 3486 CL 3487
>gi|405976645|gb|EKC41145.1| Protocadherin Fat 4 [Crassostrea gigas]
Length = 1550
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 48/111 (43%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ ++ EN +GTL+ L A D D G NS +SYS+ G+ F ID G
Sbjct: 487 NPPTFGSTFYETSIAENIGVGTLIQDLAATDIDSAGPNSAMSYSIASGNAESKFEIDTSG 546
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L + LD E + Y LT+ A D GTPP
Sbjct: 547 QLK---------------------LSATLDAETTKI-YMLTVVATDAGTPP 575
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 26/112 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y T+ E+ PI ++V TL A+D D G NS IS+S+ G+ F ID+
Sbjct: 901 NKPIFSVSKYSFTIPEDSPINSVVGTLTASDKD-TGTNSAISFSIISGEFSSDFIIDS-- 957
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPL--GYNLTLRAVDKGTP 111
+ VLK+ APL Y L ++AVD GTP
Sbjct: 958 ---------------------STAVLKVNSVLNAPLRSSYALIVQAVDGGTP 988
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P+FS V E I + + ++ A DAD G N++++YS+ G+G F+
Sbjct: 1006 NSPIFSPTTVIVKVNEMLNISSALYSVHATDADA-GANARLTYSILSGNGDLRFS----- 1059
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+DP K +++ LLDRE L Y+L + AVD G+P +
Sbjct: 1060 -----------VDPNNGK----VLLRNLLDREAVGL-YSLIIIAVDAGSPAK 1095
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 25/95 (26%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
Y T+ EN +GTL+ T+ A D D + S I+Y++ G+ FT+D
Sbjct: 603 YSHTLAENTALGTLIFTVTAQDLD---VGSAITYAITVGND-NSFTVD------------ 646
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRA 105
++ NI + KLLDRE P Y+LT+ A
Sbjct: 647 --------RQSGNIYLTKLLDRETTP-SYSLTITA 672
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 49/114 (42%), Gaps = 24/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS VY V EN PIG V + D D G+N ++ S+ G N G
Sbjct: 694 NDPVFSQNVYTGQVIENYPIGGSVTRVTCTDTD-SGVNKDLTLSIVAG---------NTG 743
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
N FRI I+ V +LD E A Y + + + D G+P R +
Sbjct: 744 --NAFRITSDVIE-----------VNSVLDYE-ATNKYVILIESKDNGSPRRSS 783
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 54/128 (42%), Gaps = 27/128 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR-------------- 47
N P FS YQ TV EN + ++T+ A D D G N +ISYS+
Sbjct: 161 NKPTFSQSSYQVTVPENTGVNLGILTVTAQDPD-LGTNGQISYSITSTAVPFPAASDSDA 219
Query: 48 GGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G DG +++ + F I K + + + LDRE A Y + + AVD
Sbjct: 220 GDDGSIVYSLMTH--TDTFAI---------KSSTHELFPIHPLDRE-AQATYEVVILAVD 267
Query: 108 KGTPPRET 115
+ + +T
Sbjct: 268 QASVASKT 275
>gi|47209327|emb|CAF93462.1| unnamed protein product [Tetraodon nigroviridis]
Length = 699
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 78/202 (38%), Gaps = 87/202 (43%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS---------------- 45
N PVFS VY+A+++EN P+GT+++TL A DAD G+N ++Y
Sbjct: 163 NVPVFSQGVYKASLQENSPVGTIILTLTATDAD-AGINGDVTYDFGHISEDIKSVFSIDQ 221
Query: 46 ----------------------VRGGDGLGYFT----------IDNEGPLNHFRI----V 69
V DGLG + +++ P+ H + +
Sbjct: 222 KSGDIKLMTMVDFEATATFELRVTAKDGLGLTSYAKVIIDVTDVNDNAPVIHLKSLTNPI 281
Query: 70 PTKIDPGTK---------------------------------KKEYNIVVLKLLDREIAP 96
P + PG++ K Y++V LDRE+
Sbjct: 282 PENVSPGSEVGIINVQDRDSENNRQVRCSIQQNVPFKLVASIKNYYSLVTTGQLDRELVS 341
Query: 97 LGYNLTLRAVDKGTPPRETYKA 118
YN+T+ A D+G+PP + K+
Sbjct: 342 -DYNITISATDEGSPPLSSSKS 362
>gi|301770757|ref|XP_002920796.1| PREDICTED: protocadherin Fat 2-like [Ailuropoda melanoleuca]
gi|281339749|gb|EFB15333.1| hypothetical protein PANDA_009583 [Ailuropoda melanoleuca]
Length = 4351
Score = 55.1 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 39/109 (35%), Positives = 53/109 (48%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F +Y V EN +G +V+T+ A D D P NS I+YS+ GG+ LG+F++
Sbjct: 3321 PRFLQDLYSTRVLENAIVGDVVLTVSATDEDGPA-NSAITYSLIGGNQLGHFSV------ 3373
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+ + V K LD E P Y+L LRA D G PP
Sbjct: 3374 --------------HPKKGELQVAKALDWEQTPT-YSLRLRATDNGRPP 3407
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F FV+Q V+EN P GT V+ + A D D G++ ++ Y +R G L FTI+ +
Sbjct: 1027 LHPPRFVSFVHQGQVQENSPSGTQVMVVAAHD-DDSGLDGELQYFLRAGTSLAAFTINQD 1085
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I L LDRE Y LT+ AVD+G+ P
Sbjct: 1086 TGM--------------------IQTLASLDREFVSC-YWLTVLAVDRGSIP 1116
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP+F+ Y+ T EN P GT V+T+ A D D G N ++YS+
Sbjct: 454 HAPIFNRSSYEGTFDENIPPGTSVLTVTATDQD-HGENGYVTYSI--------------- 497
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
H + VP IDP I K +D E+ Y +RA D G+P R+
Sbjct: 498 --THPKSVPFSIDPYLGI----ISTSKPMDYELMKRIYTFRVRASDWGSPFRQ 544
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y+ +V EN G LV+TL+ DAD N +++ + GD LG F I G
Sbjct: 2904 NAPRFASEDYRGSVVENSEPGELVVTLQTLDADISEQNRQVTCYITEGDPLGQFGISQAG 2963
Query: 62 PLNHFRIVPTK 72
+ +RI K
Sbjct: 2964 --DEWRIFSRK 2972
Score = 42.4 bits (98), Expect = 0.063, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y +V+EN PIG+ V+ L +D D P S+ + G+ F + +G
Sbjct: 3424 NPPRFFQLNYSTSVQENSPIGSKVLQLILSDPDSPENGPPYSFRITNGNDGSAFRVTPDG 3483
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLR 104
L T + + +E+ + +K+ D I PL + ++R
Sbjct: 3484 WL------VTTVGLSRRVQEWYQLQIKVSDSGIPPLSSSTSVR 3520
Score = 39.7 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P FS VY ++ E P T VI L A+D D G N +SY + G D +F I+
Sbjct: 2268 NPPTFSQLVYTTSISEGLPAQTPVIQLLASDQDS-GQNRDVSYQIVEDGSDISKFFQIN- 2325
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G V ++D T++ +++ +RA+D+G PP
Sbjct: 2326 -GSTGEMSTV-QELDYETQQH------------------FHVKVRAMDRGDPP 2358
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 22/111 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ Y+A+V + GT ++ ++A D D G N+++ YS+ G+ G+F I+
Sbjct: 1550 LHPPHFTQLHYEASVPDTTTPGTELLQVRAMDGD-RGANAEVHYSLLKGNREGFFNIN-- 1606
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L + K+D + Y+LT++A D+G+P
Sbjct: 1607 -ALLGIITLAQKLDQANHAR------------------YSLTVKAEDQGSP 1638
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTID 58
N PVF Y+A + EN P+GT VI + A D D G + ++SY + G + F ID
Sbjct: 2795 NRPVFEADPYKAVLTENMPVGTSVIQVTANDQD-TGNDGQVSYRLPVDPGSNIHELFAID 2853
Query: 59 NE 60
+E
Sbjct: 2854 SE 2855
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P S V+ +V+E+ P+ T V+ L A D D K+++++ G+ +G+F I
Sbjct: 1133 NPPQMSRPVFYPSVREDAPLHTSVLQLDAWDPDSSS-KGKLTFNITSGNNMGFFVIH--- 1188
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLD 91
PL ++D + K+ +I+ + +LD
Sbjct: 1189 PLTGLLSTARQLD--RENKDEHILEVTVLD 1216
Score = 35.8 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 2 NAPVFSDFVYQATVKENQPIGTL--VITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N PVFS ++ + E + T V L A+D D G+N +++YS+ D G F+ID
Sbjct: 1238 NPPVFSHKLFNVRLPERLSLATPGPVYRLVASDPDE-GLNGRVTYSIEESDE-GSFSID- 1294
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTL 103
P+ + G EYNI+ +K D PL ++ L
Sbjct: 1295 --PVTGMVSSSSTFTAG----EYNILTIKATDSGQPPLSASVRL 1332
>gi|66773360|ref|NP_001019270.1| protocadherin 1 alpha 4 precursor [Danio rerio]
gi|50881589|gb|AAT85374.1| protocadherin cluster 1 alpha 4 [Danio rerio]
Length = 941
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 56/115 (48%), Gaps = 19/115 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS +Y+ VKEN P+GT +I++ A D D G+NS+I YS G N
Sbjct: 231 NKPVFSKSLYKVKVKENTPVGTKIISVSARDLD-EGINSEIQYSFLGH--------GNND 281
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
LN F I T E I V +D E L ++A DKG+P + T+
Sbjct: 282 ELNRFTI-------NTNSGE--ITVQGQIDHE-EDSAIELRVQASDKGSPSKSTH 326
>gi|260828412|ref|XP_002609157.1| hypothetical protein BRAFLDRAFT_249059 [Branchiostoma floridae]
gi|229294512|gb|EEN65167.1| hypothetical protein BRAFLDRAFT_249059 [Branchiostoma floridae]
Length = 1103
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 33/46 (71%)
Query: 72 KIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+I G+K+ E+ I VL+ LDRE P GYNLTLRA DKG PP+ + K
Sbjct: 312 EIQTGSKQNEFAIKVLQTLDRETTPNGYNLTLRASDKGQPPKFSEK 357
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
AP F FV TV EN+ +GT V+ + A D D G + K+ YS+R G GLG F ID+E
Sbjct: 1047 APEFPSFVSNGTVYENEEVGTEVLRVVATDLD-SGNDGKVVYSIRDGSGLGRFVIDDE 1103
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 52/118 (44%), Gaps = 26/118 (22%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+D A + EN+ GT V+ + A D D G N ++YS L
Sbjct: 478 PVFNDSKLSANINENEKAGTWVLEVSAYDLD-AGENGYLTYS-----------------L 519
Query: 64 NHFRIVPTKIDPGTKKKEYN--IVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ VP +ID +N I K LD E+ P Y L +RA D G+P R + T
Sbjct: 520 ANVNPVPFEID------HFNGWITTTKELDYEMMPQKYMLRVRASDWGSPYRRETEMT 571
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y+ V+E+ P G +++ L+A D D G +I YS++ GD G F +D
Sbjct: 940 NAPKFIPENYKVKVREDLPKGAVILMLEAQDPD-EGRGGEIRYSLQDGDE-GKFDVDRLT 997
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ R+V +L DR++ YN+T RA DKG+P
Sbjct: 998 GV--IRLVG---------------MLDFEDRQV----YNITARAKDKGSP 1026
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 16/105 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+APVFS Y+ TV E P+ T V+ ++A D D G N++I Y ++ G+ F I++
Sbjct: 369 HAPVFSQTRYEVTVSEFAPVNTPVVMVQATDPD-TGRNAEIVYDIQRGNNKLRFGINSRT 427
Query: 62 PLNHFR---------------IVPTKIDPGTKKKEYNIVVLKLLD 91
L + + + + +P +K+ +VV+ + D
Sbjct: 428 GLIYTKGELHREERASYELIVVATDRANPSNRKRNSAVVVINIED 472
>gi|410913761|ref|XP_003970357.1| PREDICTED: protocadherin gamma-A8-like [Takifugu rubripes]
Length = 800
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 3/61 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG--GDGLGYFTIDN 59
NAP+F+ +Y+A++KEN P+GTLV T+ A+DAD G N +I+YS+ G F I+
Sbjct: 228 NAPIFTQPIYKASIKENAPVGTLVSTVTASDAD-HGSNGRITYSISNIPDQARGLFEINE 286
Query: 60 E 60
E
Sbjct: 287 E 287
>gi|301621845|ref|XP_002940255.1| PREDICTED: protocadherin Fat 3-like [Xenopus (Silurana) tropicalis]
Length = 1106
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF ++KEN IGT V+ + A D D G + +I YS+R G GLG F+ID E
Sbjct: 1040 LHTPYFPDFAVTGSIKENSRIGTSVLQVVAKDED-SGRDGEIQYSIRDGSGLGRFSIDEE 1098
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+A V E+ P+GT V+T+ A D D G N I+Y++
Sbjct: 470 NIPEFQQAFYEAFVNESVPVGTSVLTISAFDKD-LGENGYITYNI--------------A 514
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
LN ++P I+ T I +LD E +P Y +RA D G+P R
Sbjct: 515 SLN---VLPFTINQFTG----TISTSDVLDFESSPESYRFIVRASDWGSPYRH 560
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 24/105 (22%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFRIVPTK 72
+VKE+ P+G+ ++ ++A DAD G N K+ Y++ G+ F ID E G L
Sbjct: 736 SVKEDLPVGSPILLIRATDAD-SGFNGKVLYTISDGNMDSCFNIDMETGQLK-------- 786
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
V+ +DRE Y L + D G P R +++
Sbjct: 787 -------------VMMPMDRETTDR-YILNITVYDLGNPQRSSWR 817
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 48/109 (44%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
APVF Y A V E+ P+GT++ + D D G+ ++ YS+ D G F ID
Sbjct: 935 APVFIPSSYTAKVLEDLPVGTVISWFETQDPD-LGLGGQVRYSLV-NDYNGRFEID---- 988
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 989 ----------------KTSGAIRLNKELDYEKQQF-YNLTVRAKDKGRP 1020
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Query: 9 FVYQATVKENQPIGTLVITL-KAADADPPGMNSKISYSVRGGDG-LGYFTIDNEGPLNHF 66
+V+ + E+ P T+V + D DP I + G +G + TI PL+ F
Sbjct: 255 YVHIERINEHAPTVTVVSHIPSVLDTDPTYAVVTIDDADEGANGEIEAITILTGDPLDQF 314
Query: 67 RIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+V G EY I ++ + P G+N+TL+A DKG+P +
Sbjct: 315 ILVK----EGKWINEYKIKQKAPIEWDSFPFGHNITLQARDKGSPQK 357
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 24/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF + Y A E+ IGT +I ++A D D G N +++YS+ T N+
Sbjct: 829 NSPVFLEGSYSANTLESTSIGTELIQVEARDKD-LGPNGEVTYSI--------LTDTNKF 879
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+N V + V LDRE+ P Y L + A DK ++ +
Sbjct: 880 AINSSSGV--------------VYVADQLDRELVP-NYTLKIEARDKAENGQQLF 919
>gi|350414007|ref|XP_003490178.1| PREDICTED: protocadherin-like wing polarity protein stan-like
[Bombus impatiens]
Length = 3163
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 24/111 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDNEG 61
PVF + Y ++ E+ PIGT V+ + A D+D G N++I+YS+ GG+ FT
Sbjct: 802 PVFENTPYAVSLFEDAPIGTTVLVVSATDSD-VGKNAQITYSLGTDGGESASEFT----- 855
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I+P T I + LDRE+ P GY LT+ A D G PP
Sbjct: 856 -----------INPQTGA----ITTTRTLDRELVP-GYFLTVTARDGGVPP 890
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 17/121 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F +A+++E P+G+ V+T+KA D D G N+++ YS+ T G
Sbjct: 362 HAPTFEWPEDEASIREGVPVGSTVVTVKATDQD-TGRNAEVEYSILS-------TTSGSG 413
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKL-LDREIAPLGYNLTLRAVDKGTPP--RETYKA 118
N + +IDP T +V + LDRE + Y + L D+ TPP R++ A
Sbjct: 414 VANADDALTFRIDPRT-----GVVTTRTPLDREKTEV-YTVILSVSDQATPPSARKSANA 467
Query: 119 T 119
T
Sbjct: 468 T 468
Score = 43.1 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF YQ ++ E+ GT V+ + A DAD +N ++ Y++ DG G F ID+
Sbjct: 907 NAPVFESPQYQGSIPEDVAGGTSVLRVSATDAD-TDLNGRVRYALE-DDGDGAFAIDSST 964
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I K LDRE + Y L A+D+G+P T
Sbjct: 965 GV--------------------IRTAKPLDRESVAM-YILKAVAMDRGSPSLST 997
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 37/113 (32%), Positives = 50/113 (44%), Gaps = 18/113 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F +Q +V EN PIG ++ ++A DAD G N++I Y++ D
Sbjct: 586 NAPRFYTSHFQESVSENVPIGYSMLRIQAYDAD-EGANAQIKYTIGARD----------- 633
Query: 62 PLNHFRIVPTKIDPGTKKKEYN-IVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
F T+ P T E I K LDRE Y T+ A D G P+
Sbjct: 634 ----FSGASTENFPITVNTETGWIYTTKQLDREQCSR-YQFTVIAADSGEVPK 681
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F Y+A V E+ P GT V ++ A D P +++I Y + G+ G F+I ++
Sbjct: 697 NDPYFDPKNYEAVVSEDDPPGTPVTSVTATD---PDEDARIHYEITAGNTRGRFSIASQ 752
Score = 35.8 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 24/114 (21%)
Query: 2 NAPVFSDFVYQATVKEN--QPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P F++ Y A + E+ ++ ++A DAD G N+ + Y++ GG+ F+ID+
Sbjct: 479 NYPQFTERTYSAWIPEDLDYTANPVIARIRATDADS-GNNAAVRYAIIGGNTQNTFSIDS 537
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
++ ++K LD E + Y + +RA D G+P R
Sbjct: 538 --------------------MIGDVALVKPLDYE-STRSYKIVIRAQDGGSPAR 570
Score = 35.0 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F + + EN PIG+ V + A D D G N+ + YSV GG+ F ++
Sbjct: 1013 PAFENDKIVLYIAENSPIGSTVGEIYAHDPD-EGPNAVVQYSVIGGEDSNSFALNVRSGA 1071
Query: 64 NHFRIVP-TKIDPGTKKKEYNIVV 86
+ ++ ++D + KK++ +VV
Sbjct: 1072 DRAELITLEELDYESPKKKFELVV 1095
>gi|167517024|ref|XP_001742853.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779477|gb|EDQ93091.1| predicted protein [Monosiga brevicollis MX1]
Length = 3395
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 39/113 (34%), Positives = 54/113 (47%), Gaps = 23/113 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKI--SYSVRGGDGLGYFTIDN 59
NAPVFS Y TV E+ IGT V+T+ A DAD G + Y++ G+ G+FT+++
Sbjct: 1738 NAPVFSQSPYSTTVPESAAIGTTVLTVSATDADVAGTPAGTISGYTIISGNSAGFFTLNS 1797
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPL-GYNLTLRAVDKGTP 111
+ I + + LD E AP GY L +RA D TP
Sbjct: 1798 ATGV--------------------IRLARKLDAETAPAGGYQLRIRASDSATP 1830
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 48/109 (44%), Gaps = 22/109 (20%)
Query: 2 NAPVFSDFVYQAT-VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP F Y AT + E+ GT +I + A DAD N+ I+Y + GD G +TID
Sbjct: 1849 NAPQFQPGGYNATAISESASAGTTLIQVTAYDADKTSANNAITYDIV-GDVTGQWTIDQS 1907
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
G + ++ LDRE P +T+RA D G
Sbjct: 1908 GTI--------------------MLATSPLDRETYPGELTITVRARDAG 1936
Score = 40.0 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 55/126 (43%), Gaps = 26/126 (20%)
Query: 2 NAPVFSDFVY-QATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P+F+ Y A V EN GT VIT+ A D D G+N++++Y++ G G
Sbjct: 1414 NTPIFTQANYVAAPVAENSAQGTPVITVSATDID-AGINAQLTYTLLPGADAG------- 1465
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLK--LLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
HF + PT V L L+DRE A + + ++ D G P R +
Sbjct: 1466 ----HFSVHPTT----------GAVTLSADLIDRE-ASVSLSFVIQVTDGGHPSRSAQAS 1510
Query: 119 TPRNGL 124
N L
Sbjct: 1511 VSVNVL 1516
Score = 38.9 bits (89), Expect = 0.77, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N PVF+ + E GT V+ +A DAD G+N+++ Y +RG D +F +D +
Sbjct: 1954 NVPVFAQSSASMAIDEEVAPGTFVMQAQATDAD-IGLNARVYYGLRGADA-NFFVVDTD 2010
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 35/76 (46%), Gaps = 11/76 (14%)
Query: 2 NAPVF-----SDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY---SVRGGDGLG 53
N PVF S+ YQA V+ENQ +GT V+ L D D + + Y V G
Sbjct: 628 NLPVFVGNVGSNAAYQADVEENQAVGTTVVQLVVTDRDA---DLNVVYGITEVSPSSASG 684
Query: 54 YFTIDNEGPLNHFRIV 69
YF IDN L R V
Sbjct: 685 YFAIDNSTGLITTRTV 700
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 12/107 (11%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPV+ Y + E+ + T+V T+ A DAD + ++Y + DG F +D +G
Sbjct: 2591 NAPVYVAAPYSFDIDEDATVSTVVGTVMATDADSGAYGTVVNYILYSADG-APFVVDAQG 2649
Query: 62 ------PLNH-----FRIVPTKIDPGTKKKEYNIVVLKLLDREIAPL 97
PL++ + ++ T +D G ++ ++ + APL
Sbjct: 2650 TIWLVAPLDYEAVSSYTVIITAVDGGMVATNTSVTIIVHDVNDNAPL 2696
Score = 35.4 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 27/111 (24%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLV-ITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP F Y +V EN +G L+ + + A DAD + ++YSV G ++D +
Sbjct: 2801 NAPQFDSSTYAVSVSENTAVGALINLQVTATDAD---YQNNLTYSVDNASG-AVLSVDVD 2856
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
G L + L+D E + + + +T+R D GTP
Sbjct: 2857 GSLR---------------------LATLIDYETS-VQHEVTVRVTDDGTP 2885
>gi|340723065|ref|XP_003399918.1| PREDICTED: protocadherin-like wing polarity protein stan-like
[Bombus terrestris]
Length = 3163
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 24/111 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDNEG 61
PVF + Y ++ E+ PIGT V+ + A D+D G N++I+YS+ GG+ FT
Sbjct: 802 PVFENTPYAVSLFEDAPIGTTVLVVSATDSD-VGKNAQITYSLGTDGGESASEFT----- 855
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I+P T I + LDRE+ P GY LT+ A D G PP
Sbjct: 856 -----------INPQTGA----ITTTRTLDRELVP-GYFLTVTARDGGVPP 890
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 17/121 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F +A+++E P+G+ V+T+KA D D G N+++ YS+ T G
Sbjct: 362 HAPTFEWPEDEASIREGVPVGSTVVTVKATDQD-AGRNAEVEYSILS-------TTSGSG 413
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKL-LDREIAPLGYNLTLRAVDKGTPP--RETYKA 118
N + +IDP T +V + LDRE + Y + L D+ TPP R++ A
Sbjct: 414 VANADDALTFRIDPRT-----GVVTTRTPLDREKTEV-YTVILSVSDQATPPSARKSANA 467
Query: 119 T 119
T
Sbjct: 468 T 468
Score = 43.1 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF YQ ++ E+ GT V+ + A DAD +N ++ Y++ DG G F ID+
Sbjct: 907 NAPVFEAPQYQGSIPEDVAGGTSVLRVSATDAD-TDLNGRVRYAL-DDDGDGAFAIDSST 964
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I K LDRE + Y L A+D+G+P T
Sbjct: 965 GV--------------------IRTAKPLDRESVAM-YTLKAVAMDRGSPSLST 997
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 37/113 (32%), Positives = 50/113 (44%), Gaps = 18/113 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F +Q +V EN PIG ++ ++A DAD G N++I Y++ D
Sbjct: 586 NAPRFYTSHFQESVSENVPIGYSMLRIQAYDAD-EGANAQIKYTIGARD----------- 633
Query: 62 PLNHFRIVPTKIDPGTKKKEYN-IVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
F T+ P T E I K LDRE Y T+ A D G P+
Sbjct: 634 ----FSGASTENFPITVNTETGWIYTTKQLDREQCSR-YQFTVIAADSGEVPK 681
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F Y+A V E+ P GT V ++ A D P +++I Y + G+ G F+I ++
Sbjct: 697 NDPYFDPKNYEAVVSEDDPPGTPVTSVTATD---PDEDARIHYEITAGNTRGRFSIASQ 752
Score = 35.4 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 24/114 (21%)
Query: 2 NAPVFSDFVYQATVKEN--QPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P F++ Y A + E+ ++ ++A DAD G N+ + Y++ GG+ F+ID+
Sbjct: 479 NYPQFTERTYSAWIPEDLDYTANPVIARIRATDADS-GNNAAVRYAIIGGNTQNTFSIDS 537
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
++ ++K LD E + Y + +RA D G+P R
Sbjct: 538 --------------------MIGDVALVKPLDYE-STRSYKIVIRAQDGGSPAR 570
Score = 35.0 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F + + EN PIG+ V + A D D G N+ + YSV GG+ F ++
Sbjct: 1013 PAFENDKIVLYIAENSPIGSTVGEIYAHDPD-EGPNAVVQYSVIGGEDSNSFALNVRSGA 1071
Query: 64 NHFRIVP-TKIDPGTKKKEYNIVV 86
+ ++ ++D + KK++ +VV
Sbjct: 1072 DRAELITLEELDYESPKKKFELVV 1095
>gi|47213179|emb|CAF95368.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3762
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P+FS+FVY+A V E+ +GT V+ L A+D D G + + + ++ G GLG F+ID E
Sbjct: 985 LHRPLFSEFVYEAAVMEDAAVGTSVLKLTASDKD-VGRDGEFRFHIQDGSGLGVFSIDEE 1043
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I K+LDRE P Y L++ D GT P
Sbjct: 1044 TGV--------------------ICSAKILDREKMP-HYWLSVLVGDLGTEP 1074
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 14/113 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG--DGLGYFTIDN 59
NAPVF + Y+ +KE+ P G+LV+ + A +PP K++ S + G + L ++I +
Sbjct: 3255 NAPVFEEGGYRVEIKEDLPPGSLVMKVPA--QEPPVFGGKVTASDQDGPSNSLLRYSIVS 3312
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PL F I P + I V LDRE P Y+LT++A D G PP
Sbjct: 3313 GDPLQQFSIHP---------RSGEISVAAALDREEVP-HYSLTVQAADGGDPP 3355
Score = 42.4 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 51/111 (45%), Gaps = 20/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y A V E P+GT V+ + A+D D G N +++ + T NE
Sbjct: 2212 NAPVFSQRAYGAVVAEGLPVGTSVVQVSASDGD-SGRNRDLTFHM-------LRTERNET 2263
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
IDP T IV ++LD E ++L +RA D GT P
Sbjct: 2264 EF-------FDIDPHTGV----IVTKQVLDHE-GTNQFHLKIRATDNGTAP 2302
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F+ Y+A++ EN P+G+ V+ + A DAD G N+ ++Y+ + N G
Sbjct: 419 NSPQFASPSYEASLDENAPVGSSVLQVSATDAD-GGKNAFVTYA-----------LANSG 466
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P P I P T I LD E+ Y+L + A D G+P
Sbjct: 467 P------SPFTIHPFTGV----ISTSGHLDYELMRRRYHLRVWASDSGSP 506
Score = 39.3 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P VY V EN P V+ + A D D G N ++SYS+ G + ++
Sbjct: 2958 NSPQCEQLVYTEAVMENSPSSRFVLKVSAVDPD-VGANGQVSYSLHGPNA-------DKF 3009
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
LN+ + ++ L +LDRE P YNL +A D G
Sbjct: 3010 HLNY--------------RTGELLTLAVLDREAEP-EYNLVAKATDGG 3042
Score = 38.5 bits (88), Expect = 0.88, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N P FS Y+ +V EN G +++++ ADAD N ++ + GD LG+F I
Sbjct: 2852 NPPKFSLEAYRGSVVENSSPGEVLVSMTTADADVSLENRLVTCYITDGDPLGHFAI 2907
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+AT+ E G +VI ++A+D D +N K+ Y + G+ YF I+
Sbjct: 2319 NPPDFVSSQYEATLDEKAKCGHIVIKIQASDPDSGDLN-KLQYKILSGNEGRYFNINQSS 2377
Query: 62 PLNHF 66
+ F
Sbjct: 2378 GIVSF 2382
Score = 35.8 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS + ++E +P+G+ V+ L D D P S+ + G+ F +D G
Sbjct: 3372 NPPIFSRVNHSLLLQEGEPVGSSVLQLVVTDRDTPRNGPPFSFHIVSGNQERRFHVDQGG 3431
Query: 62 PLN 64
L+
Sbjct: 3432 LLS 3434
Score = 35.4 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 19/128 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F VY+A + EN +GT VI L A D D G+ + Y++ ID++G
Sbjct: 2421 HSPSFKQSVYEAELAENAEVGTQVIRLAAIDPD-EGLYGSVDYTIINKLADEKLAIDSDG 2479
Query: 62 ------PLNH----FRIVPTKI--DPGTKKKEYNIVVLKLLDR-----EIAPLGYNLTLR 104
PL+ RI+ K+ G K + V + L D + A Y ++++
Sbjct: 2480 QMVTTQPLDRENPAQRIIAVKVMAKDGGGKVAFCTVRIILTDENDNVPQFAASEYQVSIQ 2539
Query: 105 A-VDKGTP 111
+ V+KG+P
Sbjct: 2540 STVNKGSP 2547
>gi|162312016|gb|ABX84114.1| hedgling [Nematostella vectensis]
Length = 3480
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ VY+ V E+ +G++V L A D D G+N+++SYS+ GD YFT+D++G
Sbjct: 769 NAPFFALSVYKTGVYEDVAVGSIVRQLTAVDLD-VGINARLSYSLVSGD-TSYFTVDSQG 826
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
++ TK DRE Y + LRA D G+P R
Sbjct: 827 ------VIRTK---------------GAFDRE-TKASYQVALRAQDGGSPSR 856
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 56/111 (50%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P FS Y TV EN G+ ++ + A+D D G N +++YS+ G N G
Sbjct: 1807 NSPQFSQSKYTLTVTENTANGSNILRVLASDPD-AGANGRVTYSIISG---------NHG 1856
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N FR ID T + I V+ ++DRE A YNLT+ A D G PP
Sbjct: 1857 --NAFR-----IDSTTGR----ITVVGVVDRE-ALASYNLTISAKDSGVPP 1895
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 48/109 (44%), Gaps = 24/109 (22%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ Y A+V+EN P T V+ + A+D D G +SYS+ GG F+ID +
Sbjct: 2120 PAFTQQNYTASVRENSPTSTSVVKVSASDRDSFG---SLSYSIVGGKDSDKFSIDQRSGI 2176
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I +LDRE+ L Y + +R D G PP
Sbjct: 2177 --------------------ISTADVLDRELVSL-YAIQVRVTDAGNPP 2204
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 50/112 (44%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS YQ+ VKEN P GT VI + A D D N + + + G+ G FTID
Sbjct: 977 NPPVFSPSAYQSRVKENTPAGTQVIQVSATDRD-SSTNGALVFGIIKGNDDGVFTIDGST 1035
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I + K D E Y+LT++A D+G P +
Sbjct: 1036 GI--------------------ISIAKSPDYE-NKTRYDLTVQARDRGVPVK 1066
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A+V E+ IG ++T+ A+D D G N+ + YS G+ FT+D
Sbjct: 872 NRPVFSSAQYTASVDEDVAIGAAMVTVTASDKD-NGNNADLRYSFTSGNTNHAFTLDAVT 930
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ + V + LD E Y L L D+G+PP
Sbjct: 931 GV--------------------VTVSRSLDFEQRS-SYALGLSVTDRGSPP 960
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 23/117 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ Y ++ EN PIG V + A D D G N+K++Y + GD +
Sbjct: 1703 NAPVFNPGSYAKSLHENLPIGQTVAKVTATDRD-EGENAKVTYELSVGDTSKF------- 1754
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
+++P T + + LDRE Y+L + A+D G P + A
Sbjct: 1755 ----------EVNPATGL----VTTKRPLDRE-DQASYSLRVTAMDHGKPSQSAVAA 1796
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 22/108 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+ + + +V+ENQP T V+ + A+DAD G+N+++++S+ + FT+DN
Sbjct: 2428 PLINSSSLRGSVRENQPKETHVMRILASDAD-TGLNAELTFSLLSNEHKSVFTLDN---- 2482
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
T D TK LDRE + Y L + DKG P
Sbjct: 2483 -------TTGDISTKVP---------LDREQQAV-YTLRIGVADKGNP 2513
Score = 40.0 bits (92), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P F+ +Y TV EN G V + A DAD G N KISYS+ G+ F +D
Sbjct: 1289 NPPQFAKSLYTCTVGENLAAGVAVCYVTATDAD-SGANGKISYSILSGNENMAFAMD 1344
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 48/110 (43%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P+F+ + E IG+ V + A D D G N+++ YS+ GD + G
Sbjct: 1912 NSPIFASNETSYGIDEGVSIGSRVAVVTATDRDE-GSNAQVFYSIVRGDTSAFAINAMNG 1970
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L T KKE N RE P Y LT+RA D+G+P
Sbjct: 1971 VL-------------TVKKEIN--------RETVPT-YTLTIRASDRGSP 1998
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F ++ ++E+ + + V+ +K D D G N I+ S+ G+G FTID+ G
Sbjct: 1498 NAPRFEKSLFSGEIREDASVHSTVLQVKVEDKD-EGSNGAITLSL-SGEGSDNFTIDSTG 1555
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
F + T +D T Y LT+ A D G+P +
Sbjct: 1556 ----FVLSKTPLDYETTA------------------AYQLTVTARDGGSPSK 1585
Score = 36.2 bits (82), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 12 QATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL-GYFTIDNEGPLNHFRIVP 70
ATV E+ P+ T ++TL A D D + YSVR D FTIDN G R+
Sbjct: 680 SATVLESAPLNTRIVTLAATDPD----GDSLLYSVRIRDSQEKIFTIDNSG-----RLTL 730
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K+ K Y++VV IA +T+ V+ P
Sbjct: 731 NKMLDREAKSAYDLVVEASDGNIIAIAALKITVDDVNDNAP 771
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N PVF+ Y +V+EN T V+T+ A D+D G N+ + YS+ G+ F I++
Sbjct: 2016 NPPVFNSQSYIGSVRENSAQSTSVLTVAADDSD-VGANAVLRYSIISGNDEKRFKINS 2072
Score = 35.4 bits (80), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 24/107 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
++PVFS Y + E+ IG+ V+T+ A D D G ++ Y + G+ G F ID N
Sbjct: 1082 HSPVFSPSNYSKQIPESTVIGSTVVTVTATDLD-SGPRGRLEYRLISGNVKGAFNIDANS 1140
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G +I V LDRE P Y+L + A D
Sbjct: 1141 G---------------------SIRVSSELDRETTP-SYSLQVEARD 1165
>gi|432896879|ref|XP_004076361.1| PREDICTED: protocadherin Fat 3-like [Oryzias latipes]
Length = 4672
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
AP F DF + +VKEN GT V+ + A D D G + + YS+RGG GLG FTID +
Sbjct: 1022 APYFPDFAVRGSVKENSRAGTSVLPVTAKD-DDNGRDGTLRYSIRGGSGLGTFTIDED 1078
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 49/112 (43%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y A V E P G V+ + A D D G+N +++YS+ G+ G F IDN
Sbjct: 1544 NVPFFTRTTYDAVVYETSPAGYSVLQVTALDKD-SGINGQLTYSIEAGNTRGVFIIDNAT 1602
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVDKGTPP 112
RI K D +I +G Y LT+R D G PP
Sbjct: 1603 G----RISIAK------------------DLDITSVGFYTLTVRVTDNGFPP 1632
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF Y T+ E+ +GT V+ + A AD G N++I+Y++R G+ LG F I+
Sbjct: 3233 NAPVFQKRDYAVTIPEDVAVGTEVLRVLATSAD-IGPNAEITYTIRSGNELGKFIIN--- 3288
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+K +I V LD E+ Y +T+ A D G PP T
Sbjct: 3289 -----------------RKLGSISVADDLDFEVCK-DYYITVEAWDSGNPPLST 3324
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 53/114 (46%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F VY + E+ +G V + A D D +N +I+YS+ GD
Sbjct: 3338 NAPTFDQDVYNVLISEDASVGQTVTRVSAEDLDSQ-VNGRITYSILKGD----------- 3385
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
NHF IDP T + N K LDRE+ + Y L+++A D G+P T
Sbjct: 3386 RSNHFW-----IDPVTGLLKVN----KKLDRELVSM-YTLSVQAFDSGSPAMST 3429
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+PVFS Y A V EN G+ VI ++A D D G+N +I+YS G FTID +G
Sbjct: 2479 SPVFSQRFYLAEVPENSSPGSRVIQVRATDED-SGLNGQITYSFINDLGKSQFTIDADG 2536
Score = 43.1 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 18/92 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ VKE+ P+G +V+ L+ D D N +S+ + GG+ G F +
Sbjct: 2920 NPPQFDREFYRGAVKESDPLGEVVVVLRTKDQDGTDQNRLVSFYITGGNQRGVFAL---- 2975
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
+ E+ + V LLDRE
Sbjct: 2976 --------------ALVQGEWKVYVSGLLDRE 2993
Score = 42.7 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 14/104 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ SD +Y + EN P VI ++A D D S++SY + G+ +F+I
Sbjct: 1126 NAPLTSDPIYHPVIMENSPKDVSVIQIQAQDPDLSTKPSRLSYRITAGNPQNFFSINPRT 1185
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLD 91
D E HF V P T ++ V++ + D
Sbjct: 1186 GLITTTARKLDREQQAEHFLEVTVIDSPVTTRQSTVWVIVHIED 1229
Score = 38.9 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF + E+ P+GT+V+ + A D D G N I+Y++ G L + + G
Sbjct: 452 NSPVFIRPPSTIAINESLPVGTVVLVVSAVD-DDKGENGYITYTINGDQSLPFAIQQHTG 510
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
L + + LD E + Y +RA D G+P R
Sbjct: 511 ELR---------------------ITRDLDFESSKDTYTFAVRASDWGSPYR 541
Score = 38.9 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N PVF Y ATV E P GT VI ++A D D G N +++YS+
Sbjct: 2796 NQPVFETNAYVATVMEGMPAGTRVIQVRALDPD-WGSNGQVTYSL 2839
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 43/110 (39%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ A ++ NQ GT ++ L +D D P + + + G+ YF +D G
Sbjct: 3443 NPPVFAPPNSTAVIQLNQVAGTELLKLSVSDKDSPRNGAPFVFRIASGNEGSYFALDQTG 3502
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L R+ + AP + L ++A D G P
Sbjct: 3503 TLKANRLFGPE----------------------APREFTLEIQASDSGRP 3530
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAP+FS Y A+V EN L+ L+A D D G+N + YS+ G+F+ID+
Sbjct: 3127 NAPLFSSTHYLASVYENAAPKALLTRLQATDPD-EGLNRTVVYSLVDSFN-GFFSIDS 3182
Score = 36.6 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P+F + V + P+ ++TL A D D GM + Y + G+ LGYF ++
Sbjct: 558 NPPLFEKTSCRGMVSRDFPVNRTIVTLSAIDMDELGM---VKYKILSGNELGYFKLN 611
>gi|307188566|gb|EFN73294.1| Protocadherin-like wing polarity protein stan [Camponotus
floridanus]
Length = 3165
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 19/110 (17%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+PVF + Y +V E+ P+G V+ + A D+D G N++I+YS+ +G E
Sbjct: 801 SPVFENAPYSVSVFEDAPVGVTVLVVSATDSD-VGKNAQITYSLATDNG--------EQT 851
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+N F I P + I K LDRE+ P Y LT+ A D G PP
Sbjct: 852 INEFTINP---------QTGAITTTKALDRELIP-SYLLTVTARDGGIPP 891
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF Y ++ E+ +GT V+ + A DAD +N ++ Y++ DG G F ID+
Sbjct: 908 NAPVFEAPQYLGSIPEDVLVGTSVVRIAATDAD-TDLNGRVRYALE-DDGDGAFAIDSMT 965
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ + K LDRE + Y L A+D+G+P
Sbjct: 966 GI--------------------VRTAKPLDRE-SVARYTLKAAAIDRGSP 994
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 15/120 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F Y ATV+E P+G+ V+T+KA D D G N+++ Y + T +
Sbjct: 362 HTPSFEWSEYDATVREGVPVGSTVVTVKATDQD-TGRNAEVEYCIISTTAGDTTTHTEDA 420
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP--RETYKAT 119
FRI + + LDRE+ + Y + L D+ TPP R + AT
Sbjct: 421 AT--FRI---------DSRSGVVTTRTPLDREVIEV-YTVVLSVTDQATPPSTRRSTNAT 468
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 24/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGT--LVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P F++ Y A+V E+ + +V ++A DAD G N+ + Y++ GG+ F+ID+
Sbjct: 479 NYPQFTERTYSASVSEDLDYTSNPVVARIRATDADA-GANAAVRYAIIGGNTQNTFSIDS 537
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
++ ++K LD E + Y + +RA D G+P R
Sbjct: 538 MSG--------------------DVALVKPLDYE-SIRNYKIVIRAQDGGSPAR 570
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F Y+A + E+ P GT V ++ A D P +++I Y + GG+ G F+I ++
Sbjct: 697 NDPYFEPKNYEAVISEDDPPGTPVASVTATD---PDEDARIHYEITGGNTRGRFSIASQ 752
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NEGPLNHFRIVPTKI 73
+ EN PIG+ V + A D D G N+ + YS+ GG+ + FT+ +G I ++
Sbjct: 1025 IAENSPIGSTVGEIYAHDPDE-GQNAVVHYSIIGGEDINSFTLHIRQGADRAELITLEEL 1083
Query: 74 DPGTKKKEYNIVV 86
D + KK++ ++V
Sbjct: 1084 DYESPKKKFELIV 1096
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 16/112 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F +Q +V EN P+G V+ ++A DAD N+ I Y++ D G T +
Sbjct: 586 NAPRFYTSHFQESVSENVPLGYSVLRVQAYDADESN-NALIKYNIGARDFTGASTEN--- 641
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P ++ T I K LDRE Y + A+D G P+
Sbjct: 642 -------FPITVNAETGW----IYTTKQLDREQCSR-YQFIVIAMDSGEEPK 681
>gi|149037262|gb|EDL91762.1| cadherin 7, type 2 [Rattus norvegicus]
Length = 785
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G+N+++ Y + GDGLG F
Sbjct: 258 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-IGVNAEMEYKIVDGDGLGIF------ 310
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
KI P +E I + K LD E A Y L + A ++ PR
Sbjct: 311 ----------KISPDKDTQEGIITIQKELDFE-AKTSYTLRIEAANRDADPR 351
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 24/111 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNEGP 62
PVFS +Y V E +G ++ T+ A DP NS + YS+ R D YF ID
Sbjct: 375 PVFSSPLYPMEVSEATQVGHIIGTVAA--HDPDSSNSPVRYSIDRNTDLERYFNIDANSG 432
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I K LDRE P+ +N+T+ A++ P +
Sbjct: 433 I--------------------ITTAKSLDRETNPV-HNITVLAMESQNPSQ 462
>gi|119514243|gb|ABL75906.1| protocadherin 2G31 [Takifugu rubripes]
Length = 947
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG--GDGLGYFTIDN 59
NAP+F+ +Y+A++KEN P+GTLV T+ A+DAD G N +I+YS+ G F I+
Sbjct: 235 NAPIFTQPIYKASIKENAPVGTLVSTVTASDAD-HGSNGRITYSISNIPDQARGLFEINE 293
Query: 60 EG 61
E
Sbjct: 294 ES 295
>gi|339241777|ref|XP_003376814.1| putative cadherin domain protein [Trichinella spiralis]
gi|316974454|gb|EFV57941.1| putative cadherin domain protein [Trichinella spiralis]
Length = 4414
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPG-MNSKISYSVRGGDGLGYFTIDNEG 61
AP F F Y A + EN+P GT+V++LKA D D + I YS+ GGDG YF I +
Sbjct: 823 APQFDSFAYNADIYENEPPGTVVLSLKAKDPDAVDWLKPSILYSIVGGDGWHYFAIGEQD 882
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTL------RAVDKGTPPRET 115
++ ++I + + Y + ++ DR L + + R + P R
Sbjct: 883 G-----VIVSRIPLDRETRSYYWLTVEARDRAPVSLATRVDVFVAVKDRNDNAPVPARPL 937
Query: 116 YKA 118
Y+A
Sbjct: 938 YEA 940
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 16/115 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP F++ VY+A + EN +G V+T+KA D G+N +I Y + DG
Sbjct: 3056 NAPEFTELVYKAEIAENARLGDRVVTVKAFSRD-VGLNGEIVYQLLSNNDG------RRP 3108
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLD---REIAPLGYNLTLRAVDKGTPP 112
PL +P ID T N ++ L R+I LT+ A D+G+PP
Sbjct: 3109 SPLLAQSKIPFAIDSQTGVVTVNDSIVACLSAGQRQI-----QLTVVARDRGSPP 3158
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAPV + +Y+A V EN P GT ++ L A D D P + ++YS+R G+ F I+
Sbjct: 929 NAPVPARPLYEADVVENSPPGTSIVQLNATDFDEP-RSPTLTYSIREGNAQSLFQIE 984
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 26/114 (22%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNEGP 62
PVF +YQA V EN + + ++T++A D D G N ++ Y + GD + D
Sbjct: 615 PVFDRLLYQAEVDENAALSSPILTVRARDQDL-GSNGRVRYKLLTNGDKFALGSHDGL-- 671
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ V+ LDRE Y+L ++A+D G+PP ++
Sbjct: 672 ---------------------LTVIGQLDRE-RRRRYDLLVQAIDSGSPPLSSF 703
>gi|301607896|ref|XP_002933536.1| PREDICTED: protocadherin-23-like [Xenopus (Silurana) tropicalis]
Length = 3303
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 39/110 (35%), Positives = 54/110 (49%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF Y + V E QP T VI + AAD D G+N +I YS+ G+ F +D+
Sbjct: 2173 NAPVFDQLDYISFVSEGQPFNTFVIQVFAADGD-SGINGQIDYSIISGNENNAFVLDSR- 2230
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+ T + +LDREI Y LT++A D+G+P
Sbjct: 2231 ----HGILSTNV---------------ILDREIKS-SYRLTVQATDRGSP 2260
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 50/102 (49%), Gaps = 21/102 (20%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
YQAT+ E IGT V+ LKA D D G NS+++YS++ F
Sbjct: 500 YQATISEATSIGTAVLMLKAQDLDEDGPNSRVTYSLQESQNSSSFI-------------- 545
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
++PGT + + +LLD E AP+ NL A D G+PP
Sbjct: 546 --LEPGTGV----LSIAQLLDHESAPV-LNLVAVATDHGSPP 580
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 41/114 (35%), Positives = 53/114 (46%), Gaps = 24/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y+ V EN PIGT V T+ A D D G N ++ YS+R G+ GYFT+D E
Sbjct: 262 NPPVFDQLDYKGWVWENAPIGTSVCTVHATDPD-LGSNGEVRYSLRFGE--GYFTVDEES 318
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I V + LDRE + + L ++A D G P T
Sbjct: 319 G--------------------EISVSRPLDREQISI-HQLVVQARDGGDQPEVT 351
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP FS+ +Y V E+ +G V+TL A D D N+ I +S+ GG+ F +++
Sbjct: 2483 APTFSEDIYYVNVSEDALVGDTVLTLTAMDLDWSPKNALIDFSIIGGNAHNLFYLESSEV 2542
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L+H + T +++ + LD E+A + L + ++G PP
Sbjct: 2543 LSHIPFIVTG----------KLIINQPLDFEVAS-AHRLDIFVSNQGFPP 2581
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P+FS+ Y +V+E+ P+ + +I + A D+D G N+ I+YS+ G+ FTID +
Sbjct: 2598 NPPLFSNSEYHVSVREHYPLKSTIIIISATDSD-TGENADITYSIVSGNDENVFTIDAQ 2655
Score = 42.0 bits (97), Expect = 0.087, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 22/93 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ V+E+ IG+ V+ L+A+DAD G+N +I YS+ D G FT++
Sbjct: 1864 NPPTFPKSQYRTLVREDLKIGSAVLKLQASDAD-EGLNKEIMYSLI-DDTQGAFTVN--- 1918
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREI 94
+ NIV ++ LDRE+
Sbjct: 1919 -----------------RTTGNIVTIRTLDREV 1934
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
P F+ +Y+A V ENQ G VI + A D D G NS ++Y + G G+F I+ E
Sbjct: 1657 PTFTQGLYEAAVPENQDPGLYVIKVAAVDYD-LGNNSVLTYEILPGPAYGHFRINPE 1712
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 17/108 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F Y +++E+ +G + +KA DAD G +I YSV G N
Sbjct: 597 NDPIFLQQFYNVSLQEHTVLGHCFLQVKATDAD-SGPFGQIHYSVYDG-------FHNTK 648
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
FRI P D G I V +D+E P Y+L ++A D+G
Sbjct: 649 ESQSFRIDP---DSG------RICVSNDIDKESGPTSYDLLVKAEDEG 687
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
P+F D + V E+ P+GTL+ T KA D D NSKI YS+
Sbjct: 1443 PLFPDHIIVLGVDEDVPVGTLLYTFKANDKDGSLENSKIRYSL 1485
>gi|449673392|ref|XP_004207945.1| PREDICTED: protocadherin Fat 4-like [Hydra magnipapillata]
Length = 2166
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVF + Y TVKENQ + T++I + A D D G+N +I+Y + GG+ F++D N
Sbjct: 190 NSPVFDRYRYILTVKENQLVNTIIIKINATDID-IGINKEITYRILGGNKENVFSLDPNI 248
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
G L I LK ++ Y LT+ A DKG P R
Sbjct: 249 GSLTL------------------IATLKFRKQK----KYTLTVAATDKGLPSR 279
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
++ EN TLV L A D D G+N+++ + + G+ G FTI+N+G L
Sbjct: 98 SIDENVETRTLVTKLNAVDIDE-GLNAQVRFLITSGNTDGMFTINNQGEL 146
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 16/97 (16%)
Query: 24 LVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPL-------NHFRIVPTKIDP 75
+++T+ A+D D +N++I Y + G+ F ID++ G + N FR +D
Sbjct: 637 VIVTVIASDKDS-NLNAEIEYKIVSGNN-SVFEIDSKLGEVYIHLTLKNVFRFWVDSLDN 694
Query: 76 GTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G I+ K L+RE L Y +RA DKGTPP
Sbjct: 695 GI-----GIIKAKKLNREEKDL-YKFIVRASDKGTPP 725
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 45/111 (40%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+ D YQ ++KE T V+ + A+D D G N + Y ++ +F I++
Sbjct: 742 NMPLIEDKRYQISIKETVSFATFVLKITASDLD-IGKNGQFVYKIKSSPNSHHFFINSST 800
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I+ LD E Y L + +DKG+PP
Sbjct: 801 GV--------------------IMTATALDYETVS-SYILNIETIDKGSPP 830
>gi|402584837|gb|EJW78778.1| hypothetical protein WUBG_10313 [Wuchereria bancrofti]
Length = 574
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+F D +ATV EN P+ T V+ LKA D D P M + Y++ GDG+ F ID+EG L
Sbjct: 31 PLFDDIAREATVYENMPLWTEVLALKAIDPDSPEM--PVKYTLIDGDGISSFIIDSEGIL 88
>gi|74180210|dbj|BAE24432.1| unnamed protein product [Mus musculus]
Length = 227
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+++P FS FVYQ V+EN P GT V+ + A D D G++ ++ Y +R G GL F+I+ +
Sbjct: 153 LHSPHFSSFVYQGQVQENSPAGTQVMVVTAQD-DDSGLDGELQYFLRAGTGLEAFSINQD 211
>gi|47195087|emb|CAF87206.1| unnamed protein product [Tetraodon nigroviridis]
Length = 490
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/45 (55%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAPVF+ +Y+A++KEN P+GTLV T+ A+DAD G N +I+YS+
Sbjct: 225 NAPVFTQPIYKASIKENAPVGTLVSTVTASDAD-HGSNGRITYSI 268
Score = 36.2 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVF YQA + EN G + T++A DAD N+++SY
Sbjct: 435 NAPVFERSSYQAYIVENNTPGLSIFTVRARDAD-WNQNARVSY 476
>gi|431918060|gb|ELK17288.1| Protocadherin Fat 2 [Pteropus alecto]
Length = 4424
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ FV+Q V+EN P GT V+ + A D D G++ ++ Y +R G L F+I+ +
Sbjct: 1027 LHPPRFASFVHQGQVQENSPPGTQVMVVAAHD-DDSGLDGELQYFLRAGTSLTAFSINQD 1085
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L I L LDRE Y LT+ AVD+G+ P
Sbjct: 1086 TGL--------------------IQTLTPLDREFVSC-YWLTVLAVDRGSIP 1116
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 54/109 (49%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F +Y V EN +G +V+T+ A D D P +NS I+YS+ GG+ LG
Sbjct: 3395 PRFPKDLYSVRVLENAFVGDVVLTVSATDEDGP-LNSAITYSLVGGNQLG---------- 3443
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
HF I P KK E + V K LD E Y+L LRA D G PP
Sbjct: 3444 -HFDIHP-------KKGE--LQVAKALDWEQTS-SYSLRLRATDSGRPP 3481
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P FS VY +V E P T VI L A+D D G N +SY + G D +F I+
Sbjct: 2342 NPPTFSQLVYTTSVSEGLPAQTPVIQLLASDQD-SGQNRDVSYQIIEDGSDVSKFFQIN- 2399
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G+ + + +K LD E A +++ +RA+D+G PP
Sbjct: 2400 ----------------GSTGE---MSTVKELDYE-AQQHFHVKVRAMDRGDPP 2432
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 39/92 (42%), Gaps = 18/92 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y+ +V EN G V TLK DAD N +++ + GD LG F I G
Sbjct: 2978 NAPQFASEDYRGSVVENSEPGEPVATLKTFDADISEQNRQVTCYITEGDPLGQFGISQVG 3037
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
E+ I K LDRE
Sbjct: 3038 ------------------DEWRIFSRKTLDRE 3051
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 50/114 (43%), Gaps = 24/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNE 60
+AP+F+ Y T EN P GT V+T+ A D D G N ++YS+ R D
Sbjct: 454 HAPIFNRSSYDGTFDENIPPGTTVLTVTATDRD-HGENGYVTYSIARPKD---------- 502
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
VP +DP I K +D E+ Y +RA D G+P R+
Sbjct: 503 --------VPFSVDPYLGI----ISTTKPMDYELMKRIYTFQVRASDWGSPFRQ 544
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y +V+EN PIG+ V+ L D D P ++ + G+ F + +G
Sbjct: 3498 NPPRFFQLNYSTSVQENSPIGSKVLQLILNDPDSPENGPPYAFQITKGNDGSAFRVTPDG 3557
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLR 104
L T + + +E+ + +++ D I PL + ++R
Sbjct: 3558 WL------VTTVSLSKRVQEWYQLQIEVSDSGIPPLSSSTSVR 3594
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 51/111 (45%), Gaps = 22/111 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ Y+ + + + T ++ ++A D+D G+N+++ YS G+ G+F I+
Sbjct: 1624 LHPPRFTQLHYETNIPDTTALDTELLQVRAMDSDR-GVNAEVHYSFLKGNNEGFFNINT- 1681
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L + K+D + Y LT++A D+G+P
Sbjct: 1682 --LLGIITLAEKLDQAKHAR------------------YTLTVKAEDQGSP 1712
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N P S V+ +V+E+ P+ T V+ L A D D K+++++ G+ +G+F I
Sbjct: 1133 NPPRMSRPVFYPSVREDAPLHTSVLQLDAWDLDSSS-KEKLTFNITSGNHMGFFVI 1187
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 53/124 (42%), Gaps = 27/124 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F YQ T+ E+ +GT + LKA DAD N ++ Y++
Sbjct: 816 NAPIFPPGGYQVTISEDIEVGTTIAELKAKDADSDD-NGRVHYTLL-------------S 861
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
P F + P + +VV+ LDRE P Y + A D+ PR+ ++
Sbjct: 862 PTEKFSLHPLTGE---------LVVIGHLDRESEP-QYIFKVEARDQ---PRKGHQLFSV 908
Query: 122 NGLT 125
LT
Sbjct: 909 TDLT 912
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 11/105 (10%)
Query: 2 NAPVFSDFVYQATVKEN-QPIG-TLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVFS ++ + E P+ V L A+D D G+N +++YS+ D G F+ID
Sbjct: 1305 NAPVFSHKLFNVRLPERPSPVTPGPVYRLVASDLDE-GLNGRVTYSIEETDKEG-FSID- 1361
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLR 104
P+ + G EYNI+ +K D APL ++ L
Sbjct: 1362 --PVTGVVSSSSTFTAG----EYNILTIKATDSGQAPLSASVRLH 1400
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
N P+F Y+A + EN P+GT VI + A D D G + ++SY
Sbjct: 2869 NRPIFEADPYKAVLTENMPVGTSVIQVTANDQD-TGNDGQVSY 2910
>gi|156398552|ref|XP_001638252.1| predicted protein [Nematostella vectensis]
gi|156225371|gb|EDO46189.1| predicted protein [Nematostella vectensis]
Length = 1852
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ VY+ V E+ +G++V L A D D G+N+++SYS+ GD YFT+D++G
Sbjct: 164 NAPFFALSVYKTGVYEDVAVGSIVRQLTAVDLD-VGINARLSYSLVSGD-TSYFTVDSQG 221
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
++ TK DRE Y + LRA D G+P R
Sbjct: 222 ------VIRTK---------------GAFDRE-TKASYQVALRAQDGGSPSR 251
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 56/111 (50%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P FS Y TV EN G+ ++ + A+D D G N +++YS+ G N G
Sbjct: 1199 NSPQFSQSKYTLTVTENTANGSNILRVLASDPD-AGANGRVTYSIISG---------NHG 1248
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N FR ID T + I V+ ++DRE A YNLT+ A D G PP
Sbjct: 1249 --NAFR-----IDSTTGR----ITVVGVVDRE-ALASYNLTISAKDSGVPP 1287
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 48/109 (44%), Gaps = 24/109 (22%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ Y A+V+EN P T V+ + A+D D G +SYS+ GG F+ID +
Sbjct: 1512 PAFTQQNYTASVRENSPTSTSVVKVSASDRDSFG---SLSYSIVGGKDSDKFSIDQRSGI 1568
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I +LDRE+ L Y + +R D G PP
Sbjct: 1569 --------------------ISTADVLDRELVSL-YAIQVRVTDAGNPP 1596
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A+V E+ IG ++T+ A+D D G N+ + YS G+ FT+D
Sbjct: 267 NRPVFSSAQYTASVDEDVAIGAAMVTVTASDKD-NGNNADLRYSFTSGNTNHAFTLDAVT 325
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ + V + LD E Y L L D+G+PP
Sbjct: 326 GV--------------------VTVSRSLDFE-QRSSYALGLSVTDRGSPP 355
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 23/117 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ Y ++ EN PIG V + A D D G N+K++Y + GD +
Sbjct: 1095 NAPVFNPGSYAKSLHENLPIGQTVAKVTATDRD-EGENAKVTYELSVGDTSKF------- 1146
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
+++P T + + LDRE Y+L + A+D G P + A
Sbjct: 1147 ----------EVNPATGL----VTTKRPLDRE-DQASYSLRVTAMDHGKPSQSAVAA 1188
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 22/108 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+ + + +V+ENQP T V+ + A+DAD G+N+++++S+ + FT+DN
Sbjct: 1717 PLINSSSLRGSVRENQPKETHVMRILASDAD-TGLNAELTFSLLSNEHKSVFTLDN---- 1771
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
T D TK LDRE + Y L + DKG P
Sbjct: 1772 -------TTGDISTKVP---------LDREQQAV-YTLRIGVADKGNP 1802
Score = 39.3 bits (90), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P F+ +Y TV EN G V + A DAD G N KISYS+ G+ F +D
Sbjct: 681 NPPQFAKSLYTCTVGENLAAGVAVCYVTATDAD-SGANGKISYSILSGNENMAFAMD 736
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 48/110 (43%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P+F+ + E IG+ V + A D D G N+++ YS+ GD + G
Sbjct: 1304 NSPIFASNETSYGIDEGVSIGSRVAVVTATDRDE-GSNAQVFYSIVRGDTSAFAINAMNG 1362
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L T KKE N RE P Y LT+RA D+G+P
Sbjct: 1363 VL-------------TVKKEIN--------RETVPT-YTLTIRASDRGSP 1390
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 48/112 (42%), Gaps = 25/112 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS YQ+ VKEN P GT V A D D N + + + G+ G FTID
Sbjct: 372 NPPVFSPSAYQSRVKENTPAGTQV---SATDRD-SSTNGALVFGIIKGNDDGVFTIDGST 427
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I + K D E Y+LT++A D+G P +
Sbjct: 428 GI--------------------ISIAKSPDYE-NKTRYDLTVQARDRGVPVK 458
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F ++ ++E+ + + V+ +K D D G N I+ S+ G+G FTID+ G
Sbjct: 890 NAPRFEKSLFSGEIREDASVHSTVLQVKVEDKD-EGSNGAITLSL-SGEGSDNFTIDSTG 947
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
F + T +D T Y LT+ A D G+P +
Sbjct: 948 ----FVLSKTPLDYETTA------------------AYQLTVTARDGGSPSK 977
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N PVF+ Y +V+EN T V+T+ A D+D G N+ + YS+ G+ F I++
Sbjct: 1408 NPPVFNSQSYIGSVRENSAQSTSVLTVAADDSD-VGANAVLRYSIISGNDEKRFKINS 1464
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 24/107 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
++PVFS Y + E+ IG+ V+T+ A D D G ++ Y + G+ G F ID N
Sbjct: 474 HSPVFSPSNYSKQIPESTVIGSTVVTVTATDLD-SGPRGRLEYRLISGNVKGAFNIDANS 532
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G +I V LDRE P Y+L + A D
Sbjct: 533 G---------------------SIRVSSELDRETTP-SYSLQVEARD 557
>gi|73954163|ref|XP_536461.2| PREDICTED: protocadherin Fat 2 [Canis lupus familiaris]
Length = 4354
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 39/109 (35%), Positives = 52/109 (47%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F +Y V EN +G +V+T+ A D D P NS I+YS+ GG+ LG+FT+
Sbjct: 3324 PRFPQDLYSTRVLENAIVGDVVLTVSATDEDGPA-NSAITYSLVGGNQLGHFTV------ 3376
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+ + V K LD E Y+L LRA D G PP
Sbjct: 3377 --------------HPKKGELQVAKALDWEQTS-SYSLRLRATDSGRPP 3410
Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ FV+Q V+EN P GT V+ + A D D G++ ++ Y +R G L F+I+ +
Sbjct: 1030 LHPPRFASFVHQGQVQENSPSGTQVMVVAAHD-DDSGLDGELQYFLRAGTSLAAFSINQD 1088
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I L LDRE Y LT+ AVD+G+ P
Sbjct: 1089 TGM--------------------IQTLAPLDREFVSC-YWLTVLAVDRGSTP 1119
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 22/113 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+++P F+ Y+A+V + GT ++ ++A DAD G N++I YS+ G+ G+F ID
Sbjct: 1553 LHSPRFTQLHYEASVPDTTASGTELLQVRAMDAD-RGANAEIHYSLLKGNSEGFFNIDT- 1610
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
L + K+D + Y+LT++A D+G+P R
Sbjct: 1611 --LLGIITLAQKLDQANHAR------------------YSLTVKAEDQGSPQR 1643
Score = 42.7 bits (99), Expect = 0.042, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y+ +V EN G +V TLK DAD N +++ + GD LG F I G
Sbjct: 2907 NAPQFASEDYRGSVVENSEPGEVVATLKTLDADITEQNRQVTCYITEGDPLGQFGISQVG 2966
Query: 62 PLNHFRIVPTK 72
+ +RI K
Sbjct: 2967 --DEWRIFSRK 2975
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP+F+ Y T EN P GT ++T+ A D D G N ++YS+
Sbjct: 457 HAPIFNRSSYDGTFDENIPPGTSILTVTATDQD-HGENGYVTYSI--------------- 500
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+ VP IDP I K +D E+ Y +RA D G+P R+
Sbjct: 501 --TRPKAVPFSIDPYLGI----ISTSKPMDYELMRRIYTFRVRASDWGSPFRQ 547
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y +V+EN PIG+ V+ L +D D P S+ + G+ F + +G
Sbjct: 3427 NPPRFFQLNYSTSVQENSPIGSKVLQLILSDPDSPENGPPYSFLITEGNDGSAFRVTPDG 3486
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLR 104
L T + + +E+ + +K+ D I PL + ++R
Sbjct: 3487 WL------VTTMGLSRRVQEWYQLQIKVSDSGIPPLSSSTSVR 3523
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P FS VY +V E P T VI L A+D D G N +SY + G D +F I+
Sbjct: 2271 NPPTFSQLVYTTSVSEGLPAQTPVIQLLASDQDS-GQNRDVSYEIVEDGSDISKFFQIN- 2328
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G V ++D T++ +++ +RA+D+G PP
Sbjct: 2329 -GSTGEMSTV-QELDYETQQH------------------FHVKVRAMDRGDPP 2361
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTID 58
N P+F Y+A + EN P+GT VI + A D D G + ++SY + G + F ID
Sbjct: 2798 NRPIFEADPYKAVLTENMPVGTSVIQVTANDQD-TGNDGQVSYRLPVDPGSNIHELFAID 2856
Query: 59 NE 60
+E
Sbjct: 2857 SE 2858
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N P S V+ +V+E+ P+ T V+ L A D D K+++++ G+ +G+F I
Sbjct: 1136 NPPQMSRPVFYPSVREDAPLHTSVLQLDARDPDSSS-KGKLTFNITSGNNMGFFVI 1190
>gi|432090714|gb|ELK24053.1| Protocadherin Fat 3 [Myotis davidii]
Length = 1190
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F ID+E
Sbjct: 1094 LHTPYFPDFAVVGSVKENLRIGTSVLQVTARDED-SGRDGEIQYSIRDGSGLGRFNIDDE 1152
Score = 41.6 bits (96), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F +Y A V E+ P+GT V+ + A+D D G N I+YS+ + L +
Sbjct: 524 HTPEFQQPLYDAFVNESVPVGTSVLMVSASDKD-KGENGYITYSIASLNMLPF------- 575
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 576 AINQFTGV--------------ISTTEELDFESSPETYRFIVRASDWGSPYRH 614
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 24/110 (21%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFR 67
F VKEN P+G ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 785 FPSDVAVKENLPVGANILKIKAYDAD-SGFNGKVLFTISDGNTDSCFNIDMETGQLK--- 840
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 841 ------------------VLMPMDREHTDL-YLLNITIYDLGNPQKSSWR 871
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 40/91 (43%), Gaps = 21/91 (23%)
Query: 37 GMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIA 95
G N +I S S+ GD L F + EG H EY I K +D
Sbjct: 349 GANGEIESVSIVAGDPLDQFFLTKEGKWIH---------------EYKIKERKQVDWASF 393
Query: 96 PLGYNLTLRAVDKGTPPRET-----YKATPR 121
P G NLTL+A DKG+P + + + A PR
Sbjct: 394 PYGCNLTLQAKDKGSPQKSSAIKIVHIANPR 424
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F ID
Sbjct: 989 SPAFIPSSYSVKVLEDLPVGTVIAWLETHDPD-LGLGGQVRYSLV-NDYNGRFEID---- 1042
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 1043 ----------------KASGAIRLSKELDYEKQQF-YNLTVRAKDKGRP 1074
>gi|348546085|ref|XP_003460509.1| PREDICTED: protocadherin alpha-3-like, partial [Oreochromis
niloticus]
Length = 637
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 50/114 (43%), Gaps = 25/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG---LGYFTID 58
NAPVFS +Y+ EN PIGT + TL A DAD G N +I YS+R D L F ID
Sbjct: 235 NAPVFSSTLYKIKTLENSPIGTTIFTLNATDAD-EGTNGEIVYSLRSKDQDHILDIFQID 293
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P V KID +K + + A DKG PP
Sbjct: 294 ---PETGVISVKAKIDYEERK------------------AFEIRAEARDKGQPP 326
Score = 35.0 bits (79), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 47/111 (42%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP V E+ IGT + + D D G +G I N+
Sbjct: 343 NAPEIKVTSLLNAVNEDAEIGTAIALVSVLDTDS------------GKNGEVECVISNK- 389
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
VP K++ K Y++VV LDRE P YN+T+ A D+G+PP
Sbjct: 390 -------VPFKLETNYKNY-YSLVVDGHLDREETP-QYNVTISATDEGSPP 431
>gi|348546087|ref|XP_003460510.1| PREDICTED: protocadherin alpha-3-like, partial [Oreochromis
niloticus]
Length = 635
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 50/114 (43%), Gaps = 25/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG---LGYFTID 58
NAPVFS +Y+ EN PIGT + TL A DAD G N +I YS+R D L F ID
Sbjct: 235 NAPVFSSTLYKIKTLENSPIGTTIFTLNATDAD-EGTNGEIVYSLRSKDQDHILDIFQID 293
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P V KID +K + + A DKG PP
Sbjct: 294 ---PETGVISVKAKIDYEERK------------------AFEIRAEARDKGQPP 326
Score = 35.0 bits (79), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 47/111 (42%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP V E+ IGT + + D D G +G I N+
Sbjct: 343 NAPEIKVTSLLNAVNEDAEIGTAIALVSVLDTDS------------GKNGEVECVISNK- 389
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
VP K++ K Y++VV LDRE P YN+T+ A D+G+PP
Sbjct: 390 -------VPFKLETNYKNY-YSLVVDGHLDREETP-QYNVTISATDEGSPP 431
>gi|449267275|gb|EMC78241.1| Protocadherin Fat 4, partial [Columba livia]
Length = 3610
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/114 (37%), Positives = 59/114 (51%), Gaps = 13/114 (11%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF++ Y A V EN G LV+ ++A DAD G N+++ Y + G G
Sbjct: 374 NAPVFAEARYSARVPENNAAGALVLRVRAWDAD-WGQNARVRYWLGEGRVRG-------A 425
Query: 62 PL--NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
PL HF + + PG ++ +V+ K LDRE A + L LRA D G P R
Sbjct: 426 PLGDEHFSLA-VQTGPGGDQRP-ELVLAKALDREEAAF-HELMLRATDGGEPAR 476
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF++ Y A V EN G LV+ ++A DAD G N+++ Y + G +
Sbjct: 702 NAPVFAEARYSARVPENNAEGALVLRVRAWDAD-WGQNARVRYELSGDE----------- 749
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
HF + + PG ++ +V+ K LDRE A + L LRA D G P R
Sbjct: 750 ---HFSLA-VQTGPGGDQRP-ELVLAKALDREEAAF-HELVLRASDGGEPAR 795
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 20/117 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N PVF+ Y+A+++E+ P G+ V+ + A+DAD G N++I+YS L F +D
Sbjct: 3183 NTPVFAQDRYRASLREDAPPGSTVLNVSASDAD-AGTNARITYSFGETPAKVLQKFAVDP 3241
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
EG + + D +++E ++V L A+D G+PPR +
Sbjct: 3242 EGGMITLQEALDFEDTREEQRELHLV-----------------LTALDGGSPPRSAH 3281
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG--DGLGYFTIDN 59
NAPVF++ Y A + EN G LV+ ++A DAD G N+++ S++G + GYF ++
Sbjct: 1021 NAPVFAEARYSARLPENNAAGALVLRVRAWDAD-WGQNARVRNSLQGYALEANGYFAVEV 1079
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ + E N +L+RE + L L A+D G PPR
Sbjct: 1080 K-----------------RSPEGNKFAELVLEREPS---LRLVLTALDGGDPPR 1113
Score = 43.1 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
NAPVF+ Y+A+V+EN P GTLV + A D D G N I YS
Sbjct: 3294 NAPVFNQSTYKASVRENTPSGTLVARISAYDLD-DGPNGDIVYS 3336
Score = 43.1 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP + + V E+ P GT+V L D D G+N ++SY + G +
Sbjct: 2639 NAPEITMLSVSSPVPEDVPAGTVVALLNVNDRD-SGVNGEVSYELSGDE----------- 2686
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
HF + + PG ++ +V+ K LDRE A + L LRA D G P +
Sbjct: 2687 ---HFSLA-VQTGPGGDQRP-ELVLAKALDREEAAF-HELVLRASDGGEPAQ 2732
Score = 42.4 bits (98), Expect = 0.060, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
NAPVFS Y V E+ P+G+ ++T+ A DAD G+N + YS++
Sbjct: 1670 NAPVFSQAEYTVRVPEDVPVGSTLVTVTATDAD-DGVNGHVKYSLK 1714
Score = 42.0 bits (97), Expect = 0.074, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVF+ Y+A+++E+ P G+ V+ + A+DAD G N++I+Y
Sbjct: 1129 NAPVFAQDRYRASLREDAPPGSTVLNVSASDAD-SGTNARITY 1170
Score = 42.0 bits (97), Expect = 0.076, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
N PVF+ Y+A+++E+ P G+ V+ + A+DAD G N++I+YS
Sbjct: 1879 NTPVFAQDRYRASLREDAPPGSTVLNVSASDAD-AGTNARITYS 1921
Score = 41.6 bits (96), Expect = 0.096, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD--GLGYFTIDN 59
NAPVFS Y V E+ P+G+ ++T+ A DAD G N + YS++ L F +D
Sbjct: 164 NAPVFSQAEYTVRVPEDVPVGSTLVTVTATDAD-EGPNGHLKYSLKKATDMALDIFRLDA 222
Query: 60 E 60
E
Sbjct: 223 E 223
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLG 53
NAPVFS Y V E+ P+G+ ++ + A DAD G+N I YS++ L
Sbjct: 2316 NAPVFSQAEYTVRVPEDVPVGSTIVIVTATDAD-EGLNGCIKYSLKKATDLA 2366
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
NAPVFS Y V E+ P+G+ ++T+ A D D G+N + YS++
Sbjct: 811 NAPVFSQAEYTVRVPEDVPVGSTLVTVIATDPD-AGLNGHVKYSLK 855
Score = 40.0 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P S ++ + E+ P GT+V L D D G N ++ S+ G D
Sbjct: 1775 NMPEISVRSARSKISEDSPPGTVVALLHVQDRDS-GANGEVRCSLEGDDP---------- 1823
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
FR+ ++ Y++V + LDRE YN+T+RAVD G+P
Sbjct: 1824 ----FRL------RSSRGSYYSVVTARELDREQVS-EYNVTVRAVDGGSP 1862
Score = 39.3 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG--DGLGYFTID 58
NAPVF + Y A V EN G ++ + A D D G N ++SY + GG D Y +++
Sbjct: 2089 NAPVFEEAAYSAYVAENNAAGAPMLRVLARDPD-AGSNGRVSYWLSGGSADAAAYVSVE 2146
Score = 38.9 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
NAPVFS Y V E+ P+G+ ++T+ AAD G+N + YS
Sbjct: 2748 NAPVFSQAEYTVRVPEDVPVGSTLVTVTAADE---GLNGHVEYS 2788
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 8/59 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAPVF++ Y A + EN G LV+ ++A DAD G N+++ L YFT+ E
Sbjct: 2526 NAPVFAEARYSARLPENNAAGVLVLRVRAWDAD-WGQNARVRQ-------LQYFTVSGE 2576
Score = 37.0 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P + + V E+ P GT+V L D D G N ++ S +D +
Sbjct: 916 NPPELTVMSQLSEVSEDSPSGTVVALLHVQDWDS-GPNGEVRCS-----------LDGDV 963
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P R ++ Y++V + LDRE YN+T+RAVD G+P
Sbjct: 964 PFRLHR---------SRSSYYSVVTARELDREQVS-EYNVTVRAVDGGSP 1003
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
N PVFS Y V E+ P+G+ ++ + A D D G+N + YS++
Sbjct: 492 NTPVFSQAEYTVRVPEDVPVGSTLVIVTATDPD-EGLNGYVKYSLK 536
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 22/99 (22%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
+ + E+ P GT+V L D D G N ++ S+ G VP +
Sbjct: 280 SEISEDAPPGTMVALLYVQDRDS-GANGEVRCSLEGA-------------------VPFR 319
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ ++ Y++V+ + LDRE YNLT++A D G+P
Sbjct: 320 LQ-SSRGSYYSVVIARELDREQVS-EYNLTVQAADGGSP 356
Score = 35.8 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLK--AADADPPGMNSKISYSVRGG--DGLGYFTI 57
NAPVF + Y A V EN G L+ A DAD G N ++SY + G D Y ++
Sbjct: 1339 NAPVFEEAAYSAYVAENNAAGAPAPVLRVLAQDAD-SGANGRVSYWLESGSADAAAYVSV 1397
Query: 58 D 58
+
Sbjct: 1398 E 1398
Score = 35.8 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S + E+ P GT+V L D D G +G ++D +
Sbjct: 597 NAPEVSVRSALREISEDAPSGTVVALLHVQDRD------------SGANGEVRCSLDGDV 644
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P R ++ Y++V + LDRE YN+T+RA D G+P
Sbjct: 645 PFRLHR---------SRGSYYSVVTARELDREQVS-EYNVTVRAADGGSP 684
>gi|156365969|ref|XP_001626914.1| predicted protein [Nematostella vectensis]
gi|156213807|gb|EDO34814.1| predicted protein [Nematostella vectensis]
Length = 377
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F F Y +V+E+ +GT V+ ++A D D G+ +I +++ GGD G F+I N
Sbjct: 15 NAPRFLKFTYSGSVREDSTVGTEVVQVQATD-DDDGLAGEIVFAITGGDPEGLFSILN-- 71
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
T K I V + LDRE+ Y LT+ A D+ P+ T
Sbjct: 72 ---------------TSGK---ITVARSLDREMKAT-YELTVTATDRAGDPKST 106
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 54/117 (46%), Gaps = 22/117 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y A V E GT VI + A + D G +SKI+Y++ GD L +F I
Sbjct: 224 NNPTFTKAAYTAHVSEEATAGTNVIMVNATERDS-GKDSKITYNISAGDPLDHFAI---- 278
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
NH + T T K LDRE + Y +T++A D G PR Y +
Sbjct: 279 --NHLTGLVT-----TAAK---------LDRE-SRDDYVITVQATDNGQTPRVGYTS 318
>gi|157649896|gb|ABV59321.1| protocadherin epsilon3 [Callorhinchus milii]
Length = 807
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 19/111 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F VY+ ++ EN P GT VI + A D+D G N++++YS +
Sbjct: 238 NVPIFDREVYKVSLTENAPAGTFVIKVNAVDSD-EGTNAEVTYSF------------SNR 284
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
H R + + +DP T + + V +LD E +P+ Y L ++AVDKGTPP
Sbjct: 285 ASQHVRELYS-LDPKTGE----MRVEGVLDFERSPV-YELDVQAVDKGTPP 329
>gi|156379563|ref|XP_001631526.1| predicted protein [Nematostella vectensis]
gi|156218568|gb|EDO39463.1| predicted protein [Nematostella vectensis]
Length = 868
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 61/120 (50%), Gaps = 26/120 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS +Y ++ E GT VI + A D D G+N++I+YS+ GGD F++++ G
Sbjct: 702 NKPVFSPTLYLTSISEATSAGTDVIPVHATDVD-TGINAEITYSIVGGDAKNQFSVNSTG 760
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE-IAPLGYNLTLRAVDKGTPPR-ETYKAT 119
+ R + T LDRE IA Y L ++A D+G PP+ ET T
Sbjct: 761 MI---RTIAT------------------LDREDIAS--YTLLVQASDRGVPPQTETVHVT 797
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N PVF+ +Y T+ EN G V + D D G+N+ +YS+ GGDGLG F+I
Sbjct: 597 NPPVFTQEIYTTTIPENMASGASVARVATTDRDI-GINANHTYSITGGDGLGKFSI 651
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
NA VFS + A V E+ P+G + + A+DAD G N++++YS++ G+
Sbjct: 806 NAAVFSQSAFSARVLEDAPVGFRFMNISASDAD-SGDNARLTYSIQSGN 853
>gi|363739133|ref|XP_414584.3| PREDICTED: protocadherin Fat 2 [Gallus gallus]
Length = 4403
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 65/117 (55%), Gaps = 11/117 (9%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P FS Y+A ++ +GT ++ ++A D D G N++I YS++ G+G G+F+ID
Sbjct: 1557 LHPPQFSSIHYEAETLDSAAVGTEIVQVRALDQDQ-GANAEIHYSLQAGNGEGFFSID-- 1613
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLT----LRAVDKGTPPR 113
P + V K+DP K+E +++K D+ L + T +R D+ TPP+
Sbjct: 1614 -PHSGIITVAQKLDPS--KQERFTLIVKAEDQGFPQLKDSATVHIRIRPSDQ-TPPK 1666
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 56/112 (50%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F Y A ++E+ +G +++T+ A D D MN++I+YS+ G+
Sbjct: 3326 HAPEFIQDPYFADIREDAAVGEIILTVSADDLD-GAMNNQITYSIVEGN----------- 3373
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
PL HF I P K I + K LDRE Y+LT+RA D G P +
Sbjct: 3374 PLGHFAIQP---------KSGQISIAKHLDREEIS-SYSLTVRATDNGHPAQ 3415
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 53/109 (48%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ FV++ V+EN P GT V+ + A D D G + ++ Y +R G GL F+I+
Sbjct: 1032 PRFASFVFKGWVQENSPEGTSVMMVTAKDID-KGKDGEVQYFLREGTGLSVFSIEK---- 1086
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
D GT I + LDRE Y LT+ A+D GT P
Sbjct: 1087 ----------DTGT------IRTIGPLDRE-GTSHYWLTVLALDLGTVP 1118
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N PVFS+ +Y A+V E+ P T V+ + A+D D G N +SY + G D +F ID
Sbjct: 2275 NPPVFSEMIYTASVSESMPAHTPVVQIIASDKD-SGRNKVVSYQILDDGSDATKFFNID- 2332
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I + LD E + + +RA D GTPP
Sbjct: 2333 -------------------ASTGQITTAQALDYE-KTQQFRMKVRAADHGTPP 2365
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 51/113 (45%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP FS Y+ EN P GT V+T++A D D G +G +TI N+
Sbjct: 457 HAPSFSQSSYRGAFDENAPPGTSVLTVRATDED------------EGDNGFVTYTIANQ- 503
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+ VP IDP + I K LD E+ Y+L + A D G+P R
Sbjct: 504 -----KSVPFVIDPYSGI----ISTSKSLDYELMQRWYHLRVWASDWGSPFRH 547
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAP F+ Y+ +V EN G +++TL DAD N +++ + GD LG FT+D
Sbjct: 2909 NAPQFTSDFYKGSVIENAEPGQVIVTLSTIDADISEQNRRVTCYITEGDVLGQFTVDQ 2966
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG--LGYFTIDN 59
N PVF Y+A V EN P GT VI + A D D G + +++YS+ G G FTID
Sbjct: 2801 NKPVFEADPYKAFVMENMPSGTTVIQVTANDQD-TGSDGQVTYSLEAESGKLRGLFTIDG 2859
Query: 60 E 60
E
Sbjct: 2860 E 2860
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 15/104 (14%)
Query: 2 NAPVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP F D F + EN PI + + L A D D G N K+ Y + G+ FTID E
Sbjct: 712 NAPKFDDSFPRSIDIIENVPINSTIADLSAVDPDT-GFNGKLVYVISDGNVDSCFTIDLE 770
Query: 61 -------GPLNHFR-----IVPTKIDPGT-KKKEYNIVVLKLLD 91
PL+H R + T D GT +K + ++ + +LD
Sbjct: 771 LGLLQILSPLDHERTSFYILNITVYDLGTPQKSSWKLLAVNVLD 814
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 20/108 (18%)
Query: 21 IGTLVITLKAADADPPGMNS-------------KISYSVRGGD---GLGYFTIDNEGPLN 64
+ +L I ++ + PP ++S S SV GD G+ + P
Sbjct: 242 LASLTIQVEPSAKKPPSISSVKVAPPDSAEDLLYASLSVESGDSETGIDSVDFVDGDPGR 301
Query: 65 HFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
HF ++ + E+ IV +K +D + P G+NL+L+A DK PP
Sbjct: 302 HFAVIRSYF----GSTEFMIVAIKEIDWLLHPFGFNLSLQAKDKSKPP 345
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y V+EN P+GT V+ L +D D P S+ + G+ F + G
Sbjct: 3431 NPPRFFQLNYSVVVQENAPVGTSVLELIMSDRDSPENGPPYSFQITQGNDGKAFDVTQNG 3490
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG 98
L I+ ++ KE ++ +++ D I PL
Sbjct: 3491 LLVTSSILNRRV------KEQYLLQVQVSDSGIPPLS 3521
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P FS Y+A V E G +V+ ++A D D G +++ Y + G+ +FTI++
Sbjct: 2382 NPPEFSQLQYEAKVSEMATCGHIVLKVQALDPD-SGDTTRLEYVILSGNDHRHFTINS 2438
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
P+FS Y+ +++E+ P+ T+V TL A DAD G N++ Y++ L FTI
Sbjct: 149 PLFSPPSYKVSIREDTPLKTVVSTLSATDAD-AGQNAEFYYALNTKSDL--FTI 199
>gi|334331086|ref|XP_003341441.1| PREDICTED: protocadherin-23-like [Monodelphis domestica]
Length = 3395
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 13/102 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N P+FS Y A VKE+ P+G+ ++ + A D D G NS++ Y++ G+ GYF ID E
Sbjct: 2686 NPPIFSSLEYHAHVKESLPVGSQIVVVSAKDQD-IGANSEVVYTIISGNERGYFCIDGET 2744
Query: 61 ------GPLNH-----FRIVPTKIDPGTKKKEYNIVVLKLLD 91
PL++ F + + GT ++ V + +LD
Sbjct: 2745 GAIDLMKPLDYEDTIMFTLTVQASNRGTDNVAFSTVSINVLD 2786
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 49/108 (45%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF +YQA+V E QP T +I + AAD D +N +I YS+ G+ F ID
Sbjct: 2261 NVPVFQPSIYQASVAEGQPFNTEIIQVFAADLD-SDLNGQIEYSILSGNQDEAFQIDAVS 2319
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ I +LD E+ Y+L ++A DKG
Sbjct: 2320 GV--------------------IATNTILDYELTS-SYSLVVQAADKG 2346
Score = 42.4 bits (98), Expect = 0.054, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 22/110 (20%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
APVF +Y+AT+ ENQ G V ++A D D G+NS++ + + G F I++
Sbjct: 1744 APVFKQHLYEATIAENQGPGQYVTKVEAVDRD-SGINSQLQFEIMPTAKSGLFKINSSSG 1802
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
++ LDRE + + L + D+G PP
Sbjct: 1803 --------------------EVITAATLDRETQEI-FTLRVLVKDQGVPP 1831
Score = 42.4 bits (98), Expect = 0.063, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 17/108 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF VY A+V E+ P G + +KA+DAD G I Y + G+ + +
Sbjct: 683 NEPVFQRQVYNASVAEHAPSGHCFLQVKASDAD-TGRYGHIEYLLYD----GFHSSEQSQ 737
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+IDP T +I V + +DRE P+ Y+L ++A D G
Sbjct: 738 AF--------QIDPHTG----HICVSQDIDRERDPVTYDLLVKAQDGG 773
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
P F Y VKE+ +G++++ L A D D G+N ++ YS+ GD LG FTID
Sbjct: 1954 PTFPTAPYHTWVKEDLEMGSVILELSAVDED-IGLNGQVEYSLT-GDVLGIFTID 2006
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTID 58
N P+FS YQ T+ E PIG+ ++T+ A D D G N +ISY + G+G F+ID
Sbjct: 2466 NPPLFSQDFYQVTLPEITPIGSRILTVLATDQD-TGNNGEISYKILSTGEG---FSID 2519
Score = 39.7 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 16/112 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDNE 60
N PVF+ Y+ +V+E+ P GT V + A D D G N ++ YS+R G F D+E
Sbjct: 322 NPPVFNQSEYRTSVREDAPPGTAVCRVHATDLD-LGSNGQVRYSLRARQPSTGGF--DSE 378
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G F + ++ + V + LDRE A Y L + A+D G P
Sbjct: 379 GAF--FSV---------EELSGVVRVRRPLDRE-AQARYRLVVEALDGGAEP 418
Score = 38.5 bits (88), Expect = 0.97, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 15/113 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y TV E+ IGT ++T A D D N I YS+ +
Sbjct: 2570 HAPQFTMDHYNITVSEDAVIGTTLLTFSAVDHDWTNENIHIEYSIISSN----------- 2618
Query: 62 PLNHFRIVPTKIDPGTK--KKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L + +V T + P K+ ++V+ LDRE P + L + A D G P
Sbjct: 2619 -LQNIFLVETHVIPSGSPYKRVGHLVLSHPLDRETMPC-HELIILASDHGHAP 2669
Score = 35.8 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
++P F + +++EN IGTLV T A D D +NSK+ Y +
Sbjct: 1529 HSPSFQEDFIVISIEENVSIGTLVYTFNAKDGDGSFLNSKVQYFI 1573
>gi|241148648|ref|XP_002405854.1| protocadherin-16, putative [Ixodes scapularis]
gi|215493769|gb|EEC03410.1| protocadherin-16, putative [Ixodes scapularis]
Length = 3222
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 57/120 (47%), Gaps = 22/120 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF +Y+A + E P+G+ V+++ A D D N + YS+ GD F +D++
Sbjct: 1697 DPPVFLQPLYEARISEAAPVGSPVLSVSAVDRDVRPNNHQFFYSILEGDPNKVFGVDSQT 1756
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L H LDRE P Y LTL A+D+G+PP +T AT R
Sbjct: 1757 GLLH--------------------TAAPLDRESVP-SYTLTLAAIDRGSPP-QTGTATVR 1794
Score = 43.1 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
+PVF+ YQ + EN+P+ + ++T+ A DAD G+N ++ YS+ G+ F ++
Sbjct: 1385 SPVFTALSYQIIIPENEPVHSELLTVSATDAD-SGLNGEVRYSIESGNTGDSFAME 1439
Score = 42.0 bits (97), Expect = 0.076, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y A++ ENQP V + A DAD G N++I YS+ G G F++D E
Sbjct: 638 NAPEFDRSRYVASLAENQPADHPVTRITATDAD-VGRNARIRYSLHGEQG-SRFSVDAES 695
Query: 62 PLNHFRI 68
L R+
Sbjct: 696 GLVRARV 702
Score = 38.9 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 47/113 (41%), Gaps = 23/113 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F VY +V+E Q G LV L A D D G+N K+ Y +R
Sbjct: 956 NVPEFERDVYNTSVREEQSAGQLVAQLHARDGD-SGVNGKLRYELR-------------- 1000
Query: 62 PL---NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
PL F +P +ID T + + LDRE Y + A D+G P
Sbjct: 1001 PLPTSRDFDDLPFEIDAATGE----LRTTARLDRETVA-HYRFLVEARDEGDP 1048
Score = 38.5 bits (88), Expect = 0.87, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 45/108 (41%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F Y V EN +G+ ++ + A D D G N +I YS+ GD G I G
Sbjct: 218 NAPLFDPMSYSDEVLENVTVGSSLLRVSATDLD-SGDNGRIVYSIAEGDPGGQLAILANG 276
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
IV LDRE L Y+L +RA D+
Sbjct: 277 ---------------------TIVTRLPLDRERKSL-YSLVVRATDQA 302
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A V EN +G V+ + A D D G + ++ YS+ GD
Sbjct: 426 NSPVFDPRQYSAAVSENSSVGASVLRVSATDQD-EGASGQVRYSIIAGD 473
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
NAP F Y+ + E Q G+ V + A DAD G N+ +SYS+R
Sbjct: 1166 NAPRFERMAYRFRLPELQSGGSFVGRVAATDADKTGPNAAVSYSLR 1211
Score = 36.2 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG 49
P F+ + A V EN+P GT V L A+DAD G N + Y++ GG
Sbjct: 1491 PQFNATHFDAYVAENEPPGTTVTQLSASDAD-SGRNRIVQYALVGG 1535
>gi|196016717|ref|XP_002118209.1| hypothetical protein TRIADDRAFT_62266 [Trichoplax adhaerens]
gi|190579184|gb|EDV19285.1| hypothetical protein TRIADDRAFT_62266 [Trichoplax adhaerens]
Length = 3089
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 23/116 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNE 60
NAPVFS Y A++ E+ IGT V+ + A D D G+N +I + + +G G F ID
Sbjct: 912 NAPVFSQPSYNASIAEDVEIGTRVLQVAATDKD-EGVNQQIHFELAENENGNGTFAIDGS 970
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I K LDRE P Y + + A+DKG PP+ ++
Sbjct: 971 TGV--------------------IRTAKALDRETVP-EYTIVVTAIDKGRPPKHSF 1005
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 21/112 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQ ++ E+ PIGT + ++A D D N++++YS+ +++ G
Sbjct: 399 NAPRFESPSYQVSIPEDIPIGTTALQVRAQDNDASS-NARVTYSI----------VNSAG 447
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ FR+ T I++ + LDREI Y+L ++A D GT P+
Sbjct: 448 INSAFRVGVT---------SGAIIIDRSLDREITDR-YHLEIQATDSGTTPK 489
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P FS VYQA+VKE+ P+G+ V+ + A DAD N ++ YS++ G F +D+
Sbjct: 607 NQPRFSSNVYQASVKEDIPVGSSVLPVHAFDAD-SDQNKQVRYSIQRGSEEIPFNVDS 663
Score = 38.9 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 21/90 (23%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG- 61
AP F +Y A V+E++ +G ++ + A D D + I YS+ G+ F ID +G
Sbjct: 713 APKFPKSIYNADVREDEKVGRQIVQVTATDVD----SKTIYYSIVSGNVRSRFGIDPQGY 768
Query: 62 -----PLNHFRIVPTKIDPGTKKKEYNIVV 86
P+++ R +KEY +VV
Sbjct: 769 IYLAAPIDYLR-----------EKEYTLVV 787
Score = 38.5 bits (88), Expect = 0.98, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 25/110 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F D Y A + E+ IGT+++T+ A DAD N++++Y +
Sbjct: 810 HAPTF-DRAYTADIYEDTAIGTVILTVTAKDAD-ANENARLTYRI-------------VT 854
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P+ F+I K I + LDRE ++L +RA D G P
Sbjct: 855 PVREFKI---------DSKSGAISIAAALDRETRST-FSLEVRASDNGVP 894
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKIS 43
APVF+ Y +++ EN+P GT V+T+ D PG+ ++
Sbjct: 294 APVFTQSSYSSSIFENEPSGTTVLTVSVRDKSAPGLTYSMA 334
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 46/110 (41%), Gaps = 25/110 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+ T+ E+ I TLV T++A D D N+ I YS+ G
Sbjct: 505 NPPQFTQKNYKVTIAEDAKINTLVTTVRATDPDNDD-NADIRYSLAGQ------------ 551
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
N F I PT I ++ LD E Y L + A D+G P
Sbjct: 552 --NKFTINPTN---------GRITLIASLDYE-QQQSYTLDVTAKDRGRP 589
>gi|348524542|ref|XP_003449782.1| PREDICTED: protocadherin-23-like [Oreochromis niloticus]
Length = 3262
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y+ V E Q T ++ + A+DAD GMN +I YS+ G+ G F +D+
Sbjct: 2135 NAPQFEHSSYRTAVWEGQVHNTYIMQVFASDAD-SGMNGQIEYSILSGNLNGAFILDSVR 2193
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I+ T + LLDREI P Y L L+A D+G PP
Sbjct: 2194 G-----ILATNV---------------LLDREITP-SYKLVLQAADRGNPP 2223
Score = 42.7 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y A V EN +GT ++ + A D D G N + Y + G+ G+ +D +
Sbjct: 2561 NAPVFSSTEYHAQVSENSQLGTKLVQVSAHDPD-LGTNGLVRYDIISGNSKGHLKLDPQS 2619
Query: 62 PL 63
L
Sbjct: 2620 GL 2621
Score = 42.0 bits (97), Expect = 0.071, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 11/109 (10%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F +Y TV E+ PI T ++TL A D D N+ + Y++ G+ F ++
Sbjct: 2447 PSFYQDIYTLTVPEDTPIDTTLLTLSAEDQDWSPENTYLDYTITRGNEEKRFCLE----- 2501
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
++V + K +V+ LDRE Y LT+ D+G PP
Sbjct: 2502 --VKMVQIE---NQIKNVGKLVLCNALDRETTE-SYALTVSVSDRGMPP 2544
Score = 39.7 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
APVFS +Y ATV EN+ G VI + A D D N+ + YS+ G G F+I+
Sbjct: 1617 APVFSQAIYTATVAENRDPGEPVIRVSATDEDSE-ENAVVWYSLLPGPGYELFSIN 1671
Score = 36.2 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF Y ++ E+ P G+ +I +A DAD G NS++ YS+ + ID E L
Sbjct: 449 PVFEKDAYLISISEDAPQGSSLIQFQARDAD-EGANSEVRYSILKSNQDSLIDIDPESGL 507
>gi|348511876|ref|XP_003443469.1| PREDICTED: protocadherin Fat 4 [Oreochromis niloticus]
Length = 4971
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 56/120 (46%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F+ Y +V E+ P G+ +IT+ A DAD G N+++ Y + GD G+F I +G
Sbjct: 1916 NAPIFNTTTYSTSVSESLPPGSSIITVGATDAD-DGQNAQLLYKIASGDPQGHFVITKDG 1974
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L TKK LDRE YNL + D PP + +T +
Sbjct: 1975 VLQ------------TKKS---------LDRETQSF-YNLVVTVNDLAPPPITRFTSTAQ 2012
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 55/112 (49%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS +Y ++EN GT VI + A+DAD G N +I +S+ GG+ F ID+
Sbjct: 2126 NTPSFSQNIYDIEIEENILTGTDVIQVFASDAD-EGTNGQIRFSISGGNTNSDFRIDSVT 2184
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I V K LDRE A Y+L ++A D+G+ PR
Sbjct: 2185 GV--------------------ISVAKQLDRE-ARSSYSLVVQAADRGSSPR 2215
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 22/113 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+F + VY+ + E+ P G+ + + A D D G N+ + YS+ G+ LG+F+I L
Sbjct: 451 PIFQETVYRVDISEDIPKGSYIKGVSATDGD-SGQNANLRYSLVSGNALGWFSISENSGL 509
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ LLDREIA L + A D+G P+ +Y
Sbjct: 510 --------------------VTSAALLDREIAS-EIVLNISAKDQGLQPKISY 541
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 48/109 (44%), Gaps = 21/109 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF++ +Y V E G LV + A D+D S+ SYS+ FTI+
Sbjct: 3378 PVFTNELYDVQVSEGLSPGGLVTFVSAEDSDSVPSWSRFSYSIAPESDKNIFTIN----- 3432
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K + V LDRE P+ YNLT+ AVD GTPP
Sbjct: 3433 ---------------AKTGQVSVAAELDRETIPV-YNLTVLAVDTGTPP 3465
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P+F V EN IG LV ++ DAD G N+ I+YS+ + G F+
Sbjct: 1287 NSPIFPKSSLSVDVLENMRIGELVASVTGTDAD-SGQNADITYSITATNNHGTFS----- 1340
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I ++K LD E Y L + A D G PPR +
Sbjct: 1341 -----------ISPNTG----SIFLVKKLDFETQSF-YKLNITAKDNGRPPRSS 1378
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF Y+ + E++P+ + ++A D D G+N +I Y + GG+ F I +G
Sbjct: 968 NSPVFDQLSYEVIILESEPVNSRFFKVEATDKD-SGLNGEIMYDIAGGNTGDVFGIFPDG 1026
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + ++D + + YN+VV DR + PL + + +
Sbjct: 1027 QL----YIKAELDREIQDR-YNLVVTA-KDRAVEPLSATVNVTVI 1065
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 17/99 (17%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN IGT+V L +DAD N IS S+ GG+ +F + + P+ + +
Sbjct: 349 ASVDENAQIGTVVALLTVSDADSSTANGNISVSILGGNEQRHFEV-HTSPVPNLSL---- 403
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I V +LDRE YNLT+ D G P
Sbjct: 404 -----------IKVASVLDRERIS-SYNLTVSVSDNGKP 430
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 14/113 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS VY + EN +GT++ T+ A D +N+ ISY + GD G F +++ G
Sbjct: 766 NPPVFSQKVYSFVMFENVGVGTVIGTVSATTVD---LNTNISYLITSGDQRGLFDVNSAG 822
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR--EIAPLGY-NLTLRAVDKGTP 111
+ ++ID ++E LK++ R EI + N+T++ ++ P
Sbjct: 823 QITAL----SQID----REEQGFYQLKVVARAGEITGEAFVNITVKDLNDNAP 867
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 25/110 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F YQ +V E+ +G+ ++ + A+D D G N++I Y + G
Sbjct: 231 NPPIFEQDQYQTSVFEDAAVGSSILEITASDQD-EGANAEIRYFLDEG------------ 277
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P +IDP K I++ + LD E + Y+LT+ AVD G P
Sbjct: 278 -------TPFQIDP----KAGTIIIKESLDYE-SKKEYSLTIHAVDNGVP 315
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 27/100 (27%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRG--GDGLGYFTIDNEGPLNHFRIVPTK 72
++EN P+ T+V T +A DAD G NS + YS+RG G+ TID +
Sbjct: 2035 IQENTPVDTVVFTTQATDAD-SGPNSYVEYSLRGPFGNKFSIGTIDGD------------ 2081
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ ++ LDRE Y LT+ A DKG PP
Sbjct: 2082 -----------VRLIGELDREELS-NYTLTVVATDKGEPP 2109
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 26/118 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ ++ T+ E+ P GT V+ + ++DAD G+N IS + G G F+
Sbjct: 2336 NVPVFTSSIFHTTIMEDAPTGTDVLLVNSSDAD-VGVNGVISLT----GGHGQFS----- 2385
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
I+P T + I+ LLDRE Y L + A D G P + AT
Sbjct: 2386 -----------INPATGQ----IITSSLLDRE-DRANYQLLVVATDGGQPEGLSSSAT 2427
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y A VKEN+P G+ V T+ A D D G N + Y + GD + N G
Sbjct: 662 NRPVFYPVQYFANVKENEPSGSYVTTVSATDPD-LGRNGTVKYFITAGDSSKFRINSNTG 720
Query: 62 PL 63
+
Sbjct: 721 KI 722
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF + + T++EN G ++ L A DAD G N+ ++Y++ G F ID E
Sbjct: 1712 NPPVFPNDILDVTIEENVGDGFKIMQLTATDAD-EGPNALVTYTIISG-ADDSFRIDPES 1769
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP--PRETYK 117
++ TK ++ +Y+++V ++ + + N+T++ V+ TP R TY
Sbjct: 1770 G----DLIATKKLDRERRSKYSLLVRADDGKQSSDMTLNITVKDVNDHTPKFSRATYS 1823
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 24/110 (21%)
Query: 3 APVFSDFVYQATVKEN-QPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+PVF Y V+EN + + ++ + A D D G N ++SY + GG+ G FT+ + G
Sbjct: 2232 SPVFELSPYTVNVQENLENLPKNILQVIARD-DDQGANGQLSYMLSGGNDEGAFTLSSSG 2290
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L+ + + LDRE+ Y L + A D GTP
Sbjct: 2291 QLS---------------------LTETLDREVQE-KYILLITATDSGTP 2318
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
+ P FS ATV E+ +GT + TL A D D MN I+Y++ G+ G F +++
Sbjct: 3061 HTPEFSQSQISATVPESLAVGTAIRTLSARDKDKE-MNGLITYNITSGNDKGLFALNS 3117
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVF Y V+EN P GT VI L A D D G N+ ++Y ++ D F ID
Sbjct: 3166 NPPVFDPDEYFPIVQENVPSGTTVIKLNATDLD-SGANAVMAYVIQSSDS-DLFVID 3220
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 19/109 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ Y ++ E+ P GT ++ L A+D D G +G F+ D E P
Sbjct: 556 PTFTQSTYHVSLVEHAPAGTELVVLSASDDD------------LGANGTIRFSFDAETPA 603
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ + + G + LDRE Y L ++A D G+PP
Sbjct: 604 SVQELFRLDVVSG------RLSTAVELDRE-DQASYLLHIQAADAGSPP 645
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ ++ EN PI V+T+ A D D +N + YS+ G
Sbjct: 1392 NPPVFTPGDIFKSIPENLPISASVMTITAQDTD-ADINGLLQYSIVQQIPRG-------- 1442
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
NHF IDP T I K +DRE + L + LT++A D+ P
Sbjct: 1443 --NHF-----SIDPSTGL----IYTSKEIDREFSNL-FELTIKATDQAFP 1480
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 49/117 (41%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMN--SKISYSVRGGDGLGYFTIDN 59
N+PVF D + KE+ G VI A D+D G N +Y + G+ F +D
Sbjct: 116 NSPVFPDASIVVSFKEDASSGRQVILDTATDSD-IGSNGVDHTTYRIVKGNEQRKFRLD- 173
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P + Y
Sbjct: 174 -----------ITVNPSGEGAFLHLVSTGGLDREVTPF-YQLLIEVEDKGEPKKFGY 218
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 25/115 (21%)
Query: 2 NAPVFSDFVYQATVKENQP-IGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N PVF + A + EN P G L+++ D+ P N ++ Y++ G+ F+I+
Sbjct: 2641 NHPVFDKDPFHAEILENLPPKGVLMVSAVDLDSGP---NGQLEYAIIEGNKENSFSIN-- 2695
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I + LDRE L Y L ++A D+G PP+ T
Sbjct: 2696 ------------------RATGEIRTTRPLDREKVAL-YTLKVKATDRGLPPKNT 2731
>gi|322789048|gb|EFZ14506.1| hypothetical protein SINV_14408 [Solenopsis invicta]
Length = 470
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 54/110 (49%), Gaps = 21/110 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y A+V E GT V+T++A D D N++ SYS+ G+ F
Sbjct: 193 PEFLQNAYNASVSEGAVHGTRVLTVRAIDKDIKPQNNQFSYSIISGNLGQAF-------- 244
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
K+DP T E KLLDRE P+ Y+LT+ A+D G+PP+
Sbjct: 245 --------KVDPQTGDVE----TAKLLDRETLPV-YDLTIGAIDTGSPPQ 281
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 42/100 (42%), Gaps = 14/100 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N PVF V EN+P GT ++TL A D D P + +Y + GG T+D +
Sbjct: 297 NGPVFDPPEVVGYVSENEPTGTSIMTLSATDPDLPPNGAPFTYRLIGGKQSDMVTLDKHS 356
Query: 61 GPLNHFRIVPTKIDPGTK-------------KKEYNIVVL 87
G L R + + P K EY IVV+
Sbjct: 357 GVLRTTRSLDRETMPQLDLMVEVEDSGIPRMKSEYTIVVI 396
>gi|395504758|ref|XP_003756714.1| PREDICTED: protocadherin beta-16-like [Sarcophilus harrisii]
Length = 792
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 55/108 (50%), Gaps = 20/108 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS +YQATV EN PIG+ V T+ A D+D G N +++YS G G+
Sbjct: 238 NAPVFSQSLYQATVAENSPIGSEVTTVSAVDSD-QGRNGEVTYSFSQNAGKGHRAF---- 292
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ID T + I V K LD E+ Y L++RA D G
Sbjct: 293 ----------QIDSLTGE----IRVSKPLDFEMTE-KYELSVRATDGG 325
>gi|47227546|emb|CAG04694.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2413
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 55/120 (45%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y A+V E+ P G+ V+T+ A+DAD G N+++ Y + GD G+F I +G
Sbjct: 2008 NPPVFETTTYSASVSESLPAGSSVVTVVASDAD-DGPNAQLFYRIASGDPQGHFLITKDG 2066
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
N+ K LDRE YNL + D PP + +T +
Sbjct: 2067 ---------------------NLRTQKALDRETQSF-YNLVITVNDLAPPPMTRFTSTAQ 2104
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 51/112 (45%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS +Y ++EN GT VI + A DAD G N +I +S+ G +
Sbjct: 2218 NTPSFSQNIYDIEIEENTLTGTDVIQVFATDAD-EGTNGQIRFSISGSN----------- 2265
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
FRI I V + LDRE A Y+L ++A D+G+ PR
Sbjct: 2266 --TDFRIYSVT---------GMISVARQLDRE-ARSSYSLLVQATDRGSSPR 2305
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 22/113 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+F + Y+ + E+ P G+ + + A D D G N+ + YS+ G+ LG+F+I L
Sbjct: 451 PIFQETEYRVDISEDIPKGSYIKGVSATDGDS-GQNANLRYSLVSGNALGWFSISENSGL 509
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ LLDRE A L + A D+G PR +Y
Sbjct: 510 --------------------VTSAALLDRE-ATSEVVLNISAKDQGLQPRISY 541
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF Y+ + E++P+ + ++A D D G N +I Y + GG+ F I +G
Sbjct: 968 NSPVFDQLSYEVLIPESEPVNSRFFKVEATDKD-SGFNGEIVYDIAGGNTGDVFGIFPDG 1026
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + ++D +++ YN+V++ DR + PL ++ + +
Sbjct: 1027 QL----YIKAELDREIQER-YNLVLVA-RDRAVEPLSASVNVSVI 1065
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 17/99 (17%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L +D+D N IS S+ GG+ +F + + P+ + ++
Sbjct: 349 ASVDENAQVGTVVALLTVSDSDSSAANGNISVSILGGNEQRHFEV-HTSPVPNLSLIK-- 405
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
V +LDRE YNLT+ D G P
Sbjct: 406 -------------VASVLDRERIS-SYNLTVSVSDNGKP 430
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 25/110 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F +YQA+V E+ +G+ ++ + A+D D N++I Y +D E
Sbjct: 231 NPPSFERDLYQASVLEDAAVGSSILQVTASDGDEAA-NAEIRY-----------FLDEET 278
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P +IDP T I++ + LD E + Y+LT+ AVD G P
Sbjct: 279 PF--------QIDPKTG----TIIIKEGLDYE-SRREYSLTIHAVDNGVP 315
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y A VKEN+P G+ V T+ A D D G N + Y + GD + N G
Sbjct: 662 NRPVFYPLQYFANVKENEPSGSYVTTVSATDPD-LGRNGTVKYMITAGDAATFHINGNTG 720
Query: 62 PLN 64
++
Sbjct: 721 KIS 723
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 49/114 (42%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F V EN IG LV ++ A D D G N+ I+YS+ + G F+
Sbjct: 1287 NSPSFPKSSVSVDVLENMRIGELVASVTATDTD-SGPNADITYSITATNNHGTFS----- 1340
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I ++K LD E + Y L + A D G P R +
Sbjct: 1341 -----------ISPNTG----SIFLVKKLDYETQSV-YKLNVSAKDNGRPSRSS 1378
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ VYQA+V E+ P T ++ + A+D D N + Y V G+ G F ID+
Sbjct: 1182 NQPKFTKDVYQASVSESAPNVTQLLRVSASDVD-ENKNGLVQYHVAEGNEEGQFMIDSSS 1240
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I ++ LD E Y+L + AVD G P
Sbjct: 1241 G--------------------QITLVGKLDYETTS-SYSLKIIAVDGGAEP 1270
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 23/98 (23%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
++EN P+ T+V+ + A+D+D G NS + YS+ GP ++ K
Sbjct: 2127 IQENTPVDTVVLAVHASDSD-SGPNSYVEYSLH-------------GPFSN------KFS 2166
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
GT + +V LDRE Y LT+ A DKG PP
Sbjct: 2167 IGTIDGDVRLV--GELDREEIS-NYTLTVVATDKGEPP 2201
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 10/125 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF + + T++EN G ++ L A DAD S + + G + L +TI + G
Sbjct: 1792 NPPVFPNDILDVTIEENVGDGFKIMQLTATDADELPYVSWLLFPSEGPNALVTYTIIS-G 1850
Query: 62 PLNHFRIVPTKIDPGTKKK-------EYNIVVLKLLDREIAPLGYNLTLRAVDKGTP--P 112
+ FRI P D KK +Y+++V ++ + + N+T++ ++ +P
Sbjct: 1851 ADDSFRIDPESGDLIATKKLDRERRSKYSLLVRADDGKQSSDMRLNITVKDINDHSPKFS 1910
Query: 113 RETYK 117
R TY
Sbjct: 1911 RATYS 1915
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV----RGGDGLG-YF 55
++ PVFS Y +KE QP GT VI+L A + P G SK+ Y + GG G F
Sbjct: 1600 LDGPVFSQPKYITILKEGQPPGTNVISLDA--SSPRGSTSKVEYFIVAVHSGGKAAGRLF 1657
Query: 56 TI 57
TI
Sbjct: 1658 TI 1659
>gi|432099003|gb|ELK28485.1| Protocadherin Fat 1 [Myotis davidii]
Length = 1119
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVF FV + VKE+ P+G+ V+ + A D D G + +I YS+R G G+G F ID E
Sbjct: 1029 LHPPVFPSFVEKGAVKEDVPVGSSVMKVAARDED-AGRDGEIRYSIRDGSGIGVFKIDEE 1087
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 23/117 (19%)
Query: 2 NAPVFSDFV-YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+AP FS + VKE+QP+G+ ++ + A D D G N K+ Y++ GG+ F ID
Sbjct: 712 HAPRFSSHLPAGIEVKESQPVGSSILLVNATDLD-TGFNGKLVYAISGGNEDSCFLID-- 768
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+D G K VL LDRE Y L + A D G P + ++
Sbjct: 769 ------------VDTGMLK------VLSPLDRETTDR-YTLNITASDLGLPQKAVWR 806
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A+ EN P+GT V+++ A D D G N ++YS+ + + +
Sbjct: 459 NPPEFTQTSYKASFDENVPVGTTVMSVSAVDPD-EGENGYVTYSIANLNPVPFV------ 511
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+NHF G N LD E+ P Y L +RA D G P R
Sbjct: 512 -INHF--------TGAVSTSEN------LDYELMPRVYTLRIRASDWGLPYR 548
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y V+E+ P GT+V+ L+A D D G +S++ YS+ G G+F +D
Sbjct: 923 NPPKFIPAHYHVKVREDLPEGTIVMWLEAYDPD-LGQSSQVRYSLM-DHGEGHFDVD--- 977
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT+RA DKG P
Sbjct: 978 -----------------KLSGAVRIVQQLDFERKQV-YNLTVRAKDKGKP 1009
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
FR V + PG+K EY I +D + P GYNLTL+A DKGTPP+
Sbjct: 301 QQFRTV--RSSPGSK--EYKIKGTGGIDWDSHPFGYNLTLQAKDKGTPPQ 346
>gi|432090713|gb|ELK24052.1| Protocadherin Fat 3 [Myotis davidii]
Length = 3377
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VYQ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 1753 NAPVFAHEVYQGNVKESDPPGEVVAVLSTWDRDTSDINRQVSYHITGGNPRGRFAL---- 1808
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE Y L + A D
Sbjct: 1809 --------------GLVQSEWKVYVKRPLDREEQD-AYFLNITATD 1839
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A V EN L+ ++A D D G+N K+ YS+ G G+F+ID
Sbjct: 1960 NPPVFSSAHYHACVYENTANKALLTRVQAVDPD-VGINRKVVYSLADSAG-GFFSIDESS 2017
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ I++ + LDRE P YN++++A D+
Sbjct: 2018 GI--------------------IILEQPLDREQQP-SYNISVQATDQS 2044
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 25/109 (22%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI ++A D D PG +ISY++ F ID+ G
Sbjct: 1326 SPTFSQSTYVAEVRENAAAGTKVIHVRATDGD-PGTYGQISYAIINDFAKDRFLIDSNG- 1383
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLT--LRAVDKG 109
++ + LDRE PL +++ LRA+D G
Sbjct: 1384 --------------------QVITTERLDRE-NPLEGDISIFLRALDGG 1411
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D S+S+ G+ F +D G
Sbjct: 2279 NSPVFTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPPFSFSILSGNEEEEFVLDPHG 2338
Query: 62 PL 63
L
Sbjct: 2339 TL 2340
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ GT V+T+ A D G N++I+Y +R G+ G F
Sbjct: 2065 NPPVFERRDYLVTVPEDTSPGTQVLTVFATSKD-IGTNAEITYLIRSGNEQGKF------ 2117
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+I+P T I+V ++LD E+ Y L + A D GTP
Sbjct: 2118 ----------RINPRTG----GILVSEVLDYELCKKFY-LVVEAKDGGTP 2152
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P FS VY A + E+ +G VI L A DAD N +I +S+ GD F +D
Sbjct: 2170 NPPTFSQDVYSAVISEDALVGDSVILLIAEDADSQP-NGQIRFSIVSGDRDNEFAVD 2225
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y++ V E P G V ++A+DAD + ++ Y++ G+ F +D++
Sbjct: 1223 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYNILSGNDRTSFLMDSKS 1281
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG----LGYFTI 57
N PVF Y+ V E PIGT + ++A D D G N +++YS+ + F I
Sbjct: 1643 NRPVFETASYETMVMEGMPIGTKLTQVRAIDMD-WGANGQVTYSLHADSQPEKVMEAFNI 1701
Query: 58 D-NEGPLNHFRIVPTKIDPG 76
D N G ++ + + + DP
Sbjct: 1702 DSNTGWISTLKDLDHETDPS 1721
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F++ +Y+A+V E+ +G+ V+ + A D D G N+++ Y++ G N G
Sbjct: 395 HSPYFTNPLYEASVFESAALGSAVLQVTALDKD-KGENAELIYTIEAG---------NTG 444
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F+I P + T KE ++ + + L+++ D+G+PP
Sbjct: 445 --NTFKIEPV-LGIITVSKEPDMTTMG---------QFVLSVKVTDQGSPP 483
>gi|156386258|ref|XP_001633830.1| predicted protein [Nematostella vectensis]
gi|156220905|gb|EDO41767.1| predicted protein [Nematostella vectensis]
Length = 4187
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 24/108 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+ + +Y +KEN P+G+ V+T+ A DAD G+N++++YSV G G G F +D G
Sbjct: 2959 NPPICTQSIYVEHIKENTPLGSTVLTVGATDAD-VGVNAELTYSVF-GQGFGTFAVDKNG 3016
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ + L LDRE P YN + A D G
Sbjct: 3017 KMTN---------------------LVELDRETRPF-YNFMVSAADIG 3042
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 13/103 (12%)
Query: 24 LVITLKAADADPP--GMNSKISYSVRGGDGLGYFT---IDNE----GPLNHFRIVPTKID 74
L++ ++A + P + +++ G G+ Y T ID + G ++ I +D
Sbjct: 197 LIVNVQAVNQFSPEFSVKTQLQNVSEGTSGIVYATLGIIDKDKGSNGDIDRVEITSGNLD 256
Query: 75 PGTKKK----EYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
K +Y + V+K LDRE+AP GYN+TL A DKGTP R
Sbjct: 257 GAFSIKSSPNDYAVQVIKPLDRELAPFGYNVTLTAYDKGTPVR 299
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 50/112 (44%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS+ Y A V EN +GT V+ + A D D G N++I YS+ G+ F I E
Sbjct: 3268 NGPEFSEKRYSAKVDENSALGTFVLQVFATDRD-SGTNAQIKYSIAEGNDAKKFKIVEET 3326
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I V +DRE Y L +RA D+G PP+
Sbjct: 3327 GV--------------------IKVSGDIDREEVA-SYRLKVRAQDQGLPPQ 3357
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 20/138 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P+FS+ VY+ + EN P GT V + A D D G + ++YS+ D + F ID +
Sbjct: 2440 HSPIFSEDVYKVSFNENYPEGTFVTMVSATDLD-SGNYAHLTYSIDSVDAMRKFRIDADS 2498
Query: 62 PLNHFRI-------------VPTKIDPGTKKKEYNIVVLKLLDR-EIAPL----GYNLTL 103
+ + R+ VP + G + + +V + L+D + P+ Y+ T+
Sbjct: 2499 GMLYSRLMFDRENSSQAIMSVPIRATDGGGRFGFCVVEVHLIDENDNQPIFELKNYDTTI 2558
Query: 104 -RAVDKGTPPRETYKATP 120
R+V GTP T + P
Sbjct: 2559 SRSVTMGTPVLMTSASDP 2576
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 21/109 (19%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP F+ +Y AT+ E+ P+ T V+T+KA D D G+N +I+Y ++ +G F
Sbjct: 2233 APAFNRSLYLATISESTPVDTAVVTVKAIDGD-SGINKEINYFIQNVSRVGAF------- 2284
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
F+I KK + V K LD E + + + + + A D+G P
Sbjct: 2285 ---FKI---------DKKSGVVFVAKSLDYE-SRVVHEMIIVAADEGKP 2320
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 48/113 (42%), Gaps = 23/113 (20%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP F+ Y + EN P G+ V+ + A D D G S + Y++ G+ F ID +
Sbjct: 1101 APYFAPSTYYPVLAENLPSGSSVVQVTAKDPDSGG--SLLRYTITKGNEQNNFVIDPQSG 1158
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
L I L+ LDRE Y LT+ A D GTPP T
Sbjct: 1159 L--------------------ITTLRPLDREFKS-EYKLTVSASDGGTPPVST 1190
Score = 41.6 bits (96), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 23/111 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y V E+ P+ +++ +KA DAD G+N K++YS+ D G FTI+
Sbjct: 3060 NRPLFSQSSYFTAVYEDAPLKKVLLQVKADDAD-VGVNRKLTYSLV-TDAGGTFTIETGT 3117
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I + K L+RE+ Y L + +D GTPP
Sbjct: 3118 GI--------------------ISLEKPLNRELKE-NYTLNVEVMDGGTPP 3147
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 23/108 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P FS +Y V E+ PIG V+ ++A + N I+Y++ G G F+ID
Sbjct: 3166 PEFSHSIYHGNVSEDAPIGNEVVRVRAVSRESS--NDVITYAILRGADSGLFSID----- 3218
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+K I V + LD E L Y LT+ A D G P
Sbjct: 3219 ---------------RKNGTIHVNRKLDYETTKL-YTLTVEASDAGPP 3250
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 12/71 (16%)
Query: 3 APVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID--- 58
APVFS + + ++ EN P+GT+VI+ KA D D + + Y++ G G+ F ID
Sbjct: 998 APVFSGGRILETSINENSPVGTVVISPKATDQD----SWYLKYAIIDGTGVDKFIIDPDT 1053
Query: 59 ----NEGPLNH 65
G L+H
Sbjct: 1054 GAIRTAGELDH 1064
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 27/108 (25%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTIDNEGPLNHFR 67
Y+A V EN +GTLV T+K DA G+N ++ Y + + F I++
Sbjct: 1420 YRAHVAENSDVGTLVTTVKDPDA---GVNGEVEYCIVQTAKAESASLFKIESHSG----- 1471
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I+ +K LD E + LT++A D+G P RET
Sbjct: 1472 ---------------RILTVKPLDYETMQ-EHVLTIKASDRGIPKRET 1503
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 25/106 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + Y A ++E++ I + V+ + A D D +I+Y++ G+ FTID G
Sbjct: 1312 NAPVFWNKQYSADIQEDKRINSFVLIIGAEDPDF----DQITYNIASGNHGNKFTIDRYG 1367
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
I V LDRE Y+L + A D
Sbjct: 1368 GF--------------------ITVAHSLDREEKSF-YSLRVEATD 1392
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
NAP F +Y A++ + G V + A D D G K+ YS+ GG G +F ID++
Sbjct: 2338 NAPRFDKSMYAASILGSASPGQFVTRILATDPDE-GDAKKLRYSITGGQGRQHFQIDSQS 2396
Query: 61 GPLNHFRIVPTK 72
G + R+V K
Sbjct: 2397 GVITLSRVVGIK 2408
>gi|449499705|ref|XP_004186240.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Taeniopygia
guttata]
Length = 5033
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF VY+ + E+ P G+ V L A D D G+N+ + YS+ G+ LG+F I
Sbjct: 494 PVFGQSVYRVNISEDVPPGSYVRGLSATDRD-SGLNANLKYSIVSGNELGWFRIS----- 547
Query: 64 NHFRIVPTKI-DPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T + + GT LDRE A L + A D+G P+ +Y
Sbjct: 548 EHSGLVTTAVPEGGTASHAMGTSSSSRLDRETAS-QVVLNVSARDQGVQPKFSY 600
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y+ V EN GT +I + AAD D G N ++ Y++ GD F ID+
Sbjct: 2196 NNPLFAQKLYKVEVAENTLTGTDLIQVLAADGD-EGTNGQVRYAIVSGDANSEFRIDSVT 2254
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I V K LDRE P Y LT+++ D+G+ PR
Sbjct: 2255 GV--------------------ITVAKPLDREKKP-SYTLTVQSSDRGSSPR 2285
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 52/120 (43%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF ++ EN P G+ ++ DAD G NS++S+S+ GD G F IDN G
Sbjct: 1986 NPPVFGMASCSTSLMENLPPGSAILNFTVTDADD-GPNSQLSFSIASGDSAGQFGIDNRG 2044
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L+ + K LDRE Y+L ++ D P Y +T +
Sbjct: 2045 VLS---------------------IRKPLDRESQSF-YSLVVQVHDMAPLPASRYTSTAQ 2082
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 14/110 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS +YQA V E+ P+G V+ + AADAD G N+ I Y + D G
Sbjct: 242 NPPIFSQTLYQARVPEDAPVGASVLQVTAADAD-EGTNADIRYRLE--------GGDGSG 292
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ +P ++DP + I + + LD E+ Y+LT++A D+G P
Sbjct: 293 AGDGAGSLPFEVDPESGV----IRIRERLDYEVRQ-QYSLTVQATDRGVP 337
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y+ T+ E++P+ + ++A+D D G+N +I+YS+ G+ F I +G
Sbjct: 1038 NPPVFDQLSYEITILESEPVNSRFFKVQASDKD-SGVNGEIAYSIIEGNAGDAFGIFPDG 1096
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D +++ +VV DR + PL + + +
Sbjct: 1097 QL----YIKSELDRELQERYVLLVVAS--DRAVEPLNATVNVTVI 1135
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ +Y ATV E+ P GT ++ + ++DAD N+ ISY + GG+ FT
Sbjct: 2406 NVPTFAFNMYFATVPEDAPTGTDILLVNSSDAD-ASTNAVISYRLMGGN--SQFT----- 2457
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I+ LLDRE A Y L + A D G P
Sbjct: 2458 -----------INPSTGQ----IITSALLDRE-ARENYTLVVVASDGGFP 2491
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+P FS Y TV EN P GT VI L A DAD G N+ I+Y+++ D F ID
Sbjct: 3238 NSPAFSPEEYFPTVLENAPSGTTVICLNATDAD-SGSNAVIAYAIQSSDS-DLFVID 3292
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A ++EN+P GT V TL A D D G N + YS+ GD
Sbjct: 731 NSPVFYPVQYFAHIQENEPAGTYVTTLSATDPD-LGPNGTVKYSISAGD 778
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ Y + E P GT V + A D+D S+ SY + G+ F+
Sbjct: 3450 PVFTLGAYNIRISEGVPPGTHVTFVSAFDSDSVPSWSRFSYFIGSGNENSAFS------- 3502
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + + V LDRE P+ YNL++ A+D GTP
Sbjct: 3503 ---------INPQTGQ----VTVTAELDRETLPV-YNLSVLAIDSGTP 3536
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 23/98 (23%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN GT+V L +DAD P N IS S+ G+ +F + H VP
Sbjct: 371 ASVDENAAPGTVVALLTVSDADSPAANGNISVSILAGNEQRHFEV-------HSSKVP-- 421
Query: 73 IDPGTKKKEYNIVVLKL---LDREIAPLGYNLTLRAVD 107
N+ ++K+ LDRE P YNLT+ D
Sbjct: 422 ----------NLSLIKVAAALDRERIP-AYNLTVAVAD 448
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F +YQAT+ E T V+ + A+D D G+N I YSV G+ F ID
Sbjct: 1252 NAPKFLKDLYQATISELAANLTQVLRVSASDVD-EGVNGLIQYSVIKGNEENQFVIDT-- 1308
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ ++ LD E A Y+L ++AVD G
Sbjct: 1309 ------------------STGQVTLVGRLDYE-ATASYSLVIQAVDSG 1337
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 50/117 (42%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMN--SKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G +I A DAD G N SY + G+ G F ++
Sbjct: 127 NAPVFPDPSIVVTFKEDTGSGRQLILDTATDAD-SGTNGVDHGSYRIVAGNEEGRFRLN- 184
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE P Y L ++ DKG P R Y
Sbjct: 185 -----------ITLNPSGEGAFLHLVSRGGLDREATPT-YQLLVQVEDKGEPRRRGY 229
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 48/110 (43%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F V EN +G LV ++ A D+D G N+ + YS+ G + G F+
Sbjct: 1357 NSPSFPKSTLLVDVLENMRVGELVSSVTATDSD-SGDNADLHYSITGTNNHGTFS----- 1410
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I P T +I + K LD E L Y L + A D+G P
Sbjct: 1411 -----------ISPNTG----SIFLAKKLDFETQYL-YKLNITAKDQGRP 1444
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 15/114 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN-E 60
N PVFS Y V EN +G V T+ A+ D +N+ ISY + GD G F I+
Sbjct: 835 NPPVFSQGTYSFVVFENVALGYHVGTVFASTMD---LNTNISYLITTGDQRGVFAINRVT 891
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG---YNLTLRAVDKGTP 111
G + I+ ++E LK++ R A G N+T++ ++ +P
Sbjct: 892 GQITTASII--------DREEQAFYQLKVVARGGAITGDAVVNITVKDLNDNSP 937
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 27/123 (21%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY---SVRGGD-GLG-YF 55
++ PVF+ Y +KE +PIGT VI+L+A A P G +++ Y SVR D LG F
Sbjct: 1670 VDGPVFTQPKYITILKEGEPIGTNVISLEA--ASPRGSEAQVEYYIVSVRCEDKSLGRLF 1727
Query: 56 TIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
TI H ++ T +LDRE Y + + A++K + T
Sbjct: 1728 TIG-----RHTGVIQTA---------------AILDREQGARLYLVDVYAIEKSSVLPRT 1767
Query: 116 YKA 118
+A
Sbjct: 1768 QRA 1770
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 21/98 (21%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKI 73
++ EN P+G+ VI++ A D D +N +++Y++ I NHFRI +
Sbjct: 1474 SIVENVPVGSSVISVTAHDPD-ADINGQLTYAI----------IQQMPRGNHFRIDEVR- 1521
Query: 74 DPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
GT I +DRE A L + LT++A D+ P
Sbjct: 1522 --GT------IFTNAEIDREFANL-FELTVKATDQAVP 1550
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
+ P FS T+ E+ +GT+V T+ A D D MN I Y++ G+ G F I+
Sbjct: 3133 HTPEFSQSRMSVTIPESYSVGTVVRTVSARDRD-AAMNGLIRYNISSGNEAGIFAIN 3188
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 43/108 (39%), Gaps = 22/108 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y V EN VI A D G+NSK++Y + G+ G FT+ G L
Sbjct: 2303 PTFELSPYSVNVPENLETLPKVILQVVARDDDQGLNSKLTYMLVAGNEEGAFTLSGSGEL 2362
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+++ LDRE A Y L + A D G+P
Sbjct: 2363 R---------------------LVQSLDRE-AKEQYLLLVTAADTGSP 2388
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD-PPGMNSKISYSVRGGDGLGYFTIDNE 60
N P S Q V EN GTLV+TL+++D D PP Y + G YF++
Sbjct: 3554 NGPTLS--TSQGEVLENNRAGTLVMTLQSSDPDLPPNQGPFTYYLLSTGPATSYFSLSTA 3611
Query: 61 GPLNHFR 67
G L R
Sbjct: 3612 GVLTTTR 3618
>gi|431916497|gb|ELK16475.1| Protocadherin Fat 3 [Pteropus alecto]
Length = 2947
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VYQ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 1714 NAPVFAHEVYQGNVKESDPPGEVVAILSTWDRDTSDINRQVSYHITGGNPRGRFAL---- 1769
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 1770 --------------GLVQNEWKVYVKRPLDREEQDI-YFLNITATD 1800
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 25/109 (22%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI ++A D D PG +ISY++ F ID+ G
Sbjct: 1287 SPAFSQNTYVAEVRENAAAGTKVIHVRATDGD-PGTYGQISYAIINDFAKDRFLIDSNG- 1344
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLT--LRAVDKG 109
I+ + LDRE PL +++ LRA+D G
Sbjct: 1345 --------------------QIITTERLDRE-NPLEGDISIFLRALDGG 1372
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y V EN L+ ++A D D G+N K+ YS+ G+F+ID
Sbjct: 1921 NPPVFSSDHYNTCVYENTATKALLTRVQAVDPD-VGINRKVVYSL-ADSASGFFSIDGSS 1978
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ I++ LDRE P YN+++RA D+
Sbjct: 1979 GI--------------------IILEHPLDREQQP-SYNISVRATDQS 2005
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D S+S+ G+ F +D G
Sbjct: 2227 NSPVFTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPPFSFSILSGNEEKEFVLDPHG 2286
Query: 62 PL 63
L
Sbjct: 2287 IL 2288
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P FS VY A + E+ +G VI L A DAD N +I +S+ GD F++D
Sbjct: 2131 NPPKFSQDVYSAVISEDASVGDSVILLIAEDADSQP-NGQIHFSIVNGDRDNEFSVD 2186
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y A E+ P +++ + A DAD G N I YS+ G +F
Sbjct: 1819 NSPVCDQVAYTALFPEDIPSNKIILKISAKDAD-IGSNGDIRYSLYGSGHSEFF------ 1871
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+DP + + + L LLDRE P Y+L RA D G
Sbjct: 1872 -----------LDPESGE----LKTLALLDRERVP-AYSLIARATDGG 1903
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N PVF+ +Y++ V E P G V ++A+DAD + ++ Y++ G+ F +D+
Sbjct: 1184 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYNILSGNDRTSFLMDS 1240
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y V E+ GT V+ + A D G N++I+Y +R G+ G F
Sbjct: 2026 NPPVFERRDYLVAVPEDTSPGTQVLAVFATSKDI-GTNAEITYLIRSGNEQGKF------ 2078
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+I+P T I V ++LD E+ Y L + A D GTP
Sbjct: 2079 ----------RINPKTG----GISVSEVLDYELCK-KYYLVVEAKDGGTP 2113
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG----LGYFTI 57
N PVF Y+ + E P+GT + ++A D D G N +++YS+ + F I
Sbjct: 1604 NKPVFETSSYETIIMEGMPVGTKLTQVRAIDMD-WGANGQVTYSLHSDSQPEKVMEAFNI 1662
Query: 58 D-NEGPLNHFRIVPTKIDPG 76
D N G ++ + + + DP
Sbjct: 1663 DSNTGWISTLKDLDHETDPS 1682
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 23/119 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF Y A V+ + GTL+ + A D D G N +++Y ++ G
Sbjct: 874 NSPVFVGLPYYAAVQVDAEPGTLIYQVTAIDKD-KGANGEVTYVLQDDYG---------- 922
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
HF I P + GT +++ + + +++ + Y +T+ A D G P T P
Sbjct: 923 ---HFEINP---NSGT------VILKEAFNSDLSNIEYGVTILAKDGGKPSLSTSVELP 969
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++P F++ +Y+A+V E+ +G+ V+ + A D D G N+++ Y++ G+ F I+
Sbjct: 356 HSPYFTNPLYEASVFESAALGSAVLQVTALDKD-KGENAELIYTIEAGNTGNTFKIE 411
>gi|292618185|ref|XP_002663585.1| PREDICTED: protocadherin alpha-2-like [Danio rerio]
Length = 807
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 19/114 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS +Y+ V+EN P+GT +I+L A D D G NS I YS+ N
Sbjct: 231 NWPVFSKPLYKGKVRENVPVGTKIISLTATDLD-EGTNSDIIYSIA--------EHGNSK 281
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ F +VP D IVV +D E+ L ++A DKG+PP+ T
Sbjct: 282 KQSLFTVVPENGD---------IVVKGEIDHELNA-AIELRVQARDKGSPPKST 325
>gi|395504920|ref|XP_003756794.1| PREDICTED: protocadherin Fat 2 [Sarcophilus harrisii]
Length = 4252
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 55/112 (49%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ FVYQ V+EN GTLV+++ A D D G + I Y +R G L F+ID +
Sbjct: 1023 LHPPRFASFVYQGQVEENSLPGTLVLSVTAQDVD-LGQDGVIQYFLRDGTDLATFSIDRD 1081
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I + LDRE P Y LT+ AVD+G+ P
Sbjct: 1082 TGM--------------------IQTIMPLDREFIP-HYWLTVLAVDQGSVP 1112
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 41/108 (37%), Positives = 51/108 (47%), Gaps = 22/108 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F +Y VKE+ +G ++T+ A D D P +NS I+YS+ GD LG+FTI
Sbjct: 3216 PKFLQDLYSVEVKEDAAVGESILTVSATDGDGP-LNSAITYSLVAGDRLGHFTIH----- 3269
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
KK E I K LD E Y LTLRA D G P
Sbjct: 3270 -------------PKKGELQIA--KHLDWEETS-SYFLTLRATDSGQP 3301
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 49/112 (43%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+APVFS Y T EN P GT V+T+ A D D G N ++YS+
Sbjct: 453 HAPVFSQSSYHGTFDENLPPGTSVLTVTATDQD-HGENGFVTYSITSP------------ 499
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
RIVP IDP I KL+D E+ Y + A D G+P R
Sbjct: 500 -----RIVPFTIDPYLGV----ISTSKLMDYELMQRLYTFRVWATDWGSPFR 542
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 18/92 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ VY+ +V EN G V+TL+ DAD N +++ + GD LG F I
Sbjct: 2799 NAPQFASDVYKGSVIENGDPGEHVVTLRTLDADISEQNRQVTCYITEGDPLGQFDISQTA 2858
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
E+ I K+LDRE
Sbjct: 2859 ------------------DEWKISTKKILDRE 2872
Score = 43.9 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ Y+ T +GT ++ ++A D D G N ++ YS++ G+ +F ID
Sbjct: 1446 LHPPSFTQLHYETTTSNTASLGTELLQVRALDVD-RGFNGQVQYSLQAGNSESFFNID-- 1502
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P V K+D + + Y LT+RA D+G+PP
Sbjct: 1503 -PHLGIITVAQKLDLMPQDQ------------------YMLTVRAEDQGSPP 1535
Score = 42.4 bits (98), Expect = 0.060, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 20/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ VY A V E P T VI L A+D D G N +SYS+ +++E
Sbjct: 2164 NPPIFTQLVYTALVSEGLPAQTPVIKLLASDKD-SGRNKDVSYSM----------VEDES 2212
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ F +ID T + + + LD E +++ +RAVD G PP
Sbjct: 2213 EDSSF----FQIDKSTGE----MSTAQELDYETQQ-QFHVKVRAVDNGIPP 2254
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTID 58
N PVF Y+A + EN P+GT VI + A D D G+N +++YS+ +G F I+
Sbjct: 2690 NKPVFEADPYKAFLTENMPVGTTVIQVTANDQD-TGVNGEVTYSLAFEQGNAAAELFAIN 2748
Query: 59 NE 60
+E
Sbjct: 2749 SE 2750
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P S VY +VKE+ P+ T V+ L A D D K+++ + G+ LG+F I
Sbjct: 1129 NPPQMSRPVYYPSVKEDAPMNTSVLQLDAWDPDTVS-KGKLTFHIISGNNLGFFVI---- 1183
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLT---LRAVDKGTPPR 113
N + I K +KL D LG +L ++AVD G PPR
Sbjct: 1184 --NSLTVSMRDIQEMAK--------VKLTD-----LGKSLDGDRIQAVDNGQPPR 1223
Score = 35.8 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y V+EN P+G+ V+ L +D D P S+ + G+ F + +G
Sbjct: 3319 NPPRFFQLNYSIVVQENAPLGSRVLELILSDQDSPKNGPPYSFRITEGNDGSAFRVTEDG 3378
Query: 62 PL 63
L
Sbjct: 3379 WL 3380
>gi|125835070|ref|XP_693952.2| PREDICTED: protocadherin Fat 1-like [Danio rerio]
Length = 4472
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 55/116 (47%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
M P F FV TV E+ +GT V+ + A D D G + ++ YS+RGG GLG FTI+ E
Sbjct: 1028 MYRPNFPFFVDWGTVLEDASVGTSVLKVAAHDEDS-GRDGEVRYSIRGGSGLGVFTINEE 1086
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I ++LDRE Y LT+ A D+G P ++
Sbjct: 1087 SGI--------------------ITTQEILDRETNN-HYWLTVYATDQGIVPLSSF 1121
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 30/116 (25%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG----LGYFTI 57
NAPVF Y+A++ E+ PIGT V+T+ A D D G N ++YS+ + + YFT
Sbjct: 458 NAPVFQKSNYEASIAEHVPIGTSVLTVSATDMD-DGENGYVTYSIVNVNKQPFVVDYFT- 515
Query: 58 DNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
++ T D LD E P ++L +RA D G+P R
Sbjct: 516 ---------GVISTTED---------------LDYETMPSKFSLRIRASDWGSPFR 547
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 10 VYQATVKENQPIGTLV-ITLKAADADPPGMNSKISYSVRGGDG-LGYFTIDNEGPLNHFR 67
V+ E+ P+ T V +T +DP + + + G +G + I PL F+
Sbjct: 242 VHVLQANEHSPVITAVPLTPWNTTSDPTYAHVTVEDADEGQNGEIASLNIVAGDPLQQFK 301
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
T +PG+K EY I +K ++ E GYNLTL+A DKG PP+
Sbjct: 302 TFRT--NPGSK--EYKIKAVKKVEWEGYSFGYNLTLQAKDKGNPPK 343
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 37/107 (34%), Positives = 51/107 (47%), Gaps = 23/107 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV VY V E+ IG ++ + A DAD N++I+Y + G G FTID+
Sbjct: 3010 NSPVCEKDVYAQAVPEDVLIGKHILQVSATDADIQS-NAEITYQL-SGSGAESFTIDS-- 3065
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK 108
K + L LDRE+ + YNLT+RAVDK
Sbjct: 3066 ------------------KTGAVKTLATLDREVTDV-YNLTVRAVDK 3093
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F Y V+E+ P+GTLV+ L+ D D G++ ++ YS+ GD G F +D
Sbjct: 922 NPPMFVPQHYHIRVREDIPVGTLVLWLETHDPD-LGLSGQVRYSLTDGDD-GNFQVD--- 976
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + V + LD E + YNLT +A D+G P
Sbjct: 977 -----------------KMSGAVYVSQTLDFETRQI-YNLTAKAKDRGRP 1008
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 24/111 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN-E 60
N+PVFS +Y A V E+ + + V+T+ A D D P +N++I YS+ + F +D
Sbjct: 3322 NSPVFSQKIYSAVVSEDTRLASTVLTVLANDLDGP-LNNQIRYSIEESNQSCPFIMDAVS 3380
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
G L + + LDRE+ Y LT+ A D G+P
Sbjct: 3381 GELQ---------------------LARQLDREMVA-SYMLTVMASDSGSP 3409
Score = 43.1 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 22/101 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKEN P+GT V L+AAD+D G N K+ + + GGD FTI++ D
Sbjct: 725 VKENLPVGTSVALLRAADSD-SGFNGKLLFVISGGDFDSCFTIES--------------D 769
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
G K V + LDRE Y L + D G P + +
Sbjct: 770 TGWLK------VFQPLDRETTDR-YTLKITVYDLGLPQKSS 803
Score = 42.4 bits (98), Expect = 0.054, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP+ ++ VY +V EN P G VI ++A D D + +SY + G+ G+F ID
Sbjct: 1134 NAPLTTEPVYFPSVSENSPKGVSVIQIQAFDLDSES-SENLSYKISSGNPQGFFAID 1189
Score = 42.4 bits (98), Expect = 0.070, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG----DGLGYFTI 57
N+P F F YQ+ + EN P GT V+ +KA D D +N +I+Y++ D L F++
Sbjct: 2794 NSPQFESFRYQSCIAENLPKGTSVVQVKATDLD-SWLNGQITYALHENQQPPDVLQLFSV 2852
Query: 58 DNE 60
++E
Sbjct: 2853 NSE 2855
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ + ++ +N GT V L+A DAD GMN KI YS G G F+I+
Sbjct: 3112 NAPKFTSDPHHVSIYQNTQPGTYVARLEAFDAD-IGMNGKIRYSFEDSAG-GLFSIEESS 3169
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I + + LD+++ + + L +RA D+G P R
Sbjct: 3170 GI--------------------ISLERSLDKQMKAM-HVLRVRATDQGFPHR 3200
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P+F+ +Y AT+ + G LV +KA DAD G +S + Y++ G+ F ID
Sbjct: 2379 NPPIFAQQLYNATISKISSPGQLVTCVKAFDADSHG-SSNLEYAILSGNDNNIFAID 2434
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
PVF Y +TV E+ IGT ++ + AA D M S+I+YS G+ G F ID++
Sbjct: 3219 PVFERREYISTVPEDVTIGTKLLKVFAASKDRQ-MTSQITYSFSSGNEQGAFRIDSQ 3274
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 11/112 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F D Y A V+ +Q +G++ + D D G N++I+Y ++G D YF ++ G
Sbjct: 2071 NAPFFVDQPYHAVVQVDQTVGSVFAKVTTVDRD-IGKNAEITYYLKGHD--KYFQVNPFG 2127
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYN--LTLRAVDKGTP 111
++ R P +++ K ++ + D PL N + + V+K TP
Sbjct: 2128 EISLKR--PLELESIGKY----VINITAQDEGEPPLFSNAEVVISVVNKATP 2173
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPI-GTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N P+F++ V++ V+E++ GT+V L D+D +N + + + GGD G F +
Sbjct: 2904 NPPLFTEAVFKGAVREDESTPGTVVTILSYVDSDSDEVNRRFNCFITGGDPQGLFDV 2960
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 45/110 (40%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y A V E IG+ V+ + A D D N++I YS+ G+ F ID
Sbjct: 1552 NPPWFTSSQYAARVFETAAIGSSVLQVTALDKD-KSFNAEILYSIDSGNHGTSFIIDQSS 1610
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ I V + LD E Y L ++A DKG P
Sbjct: 1611 GI--------------------ITVARELDCETRD-QYELIIKASDKGEP 1639
Score = 35.4 bits (80), Expect = 8.0, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 24/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F Y+ TV + P T VI A D D G N+ I Y++ E
Sbjct: 2585 NSPKFKHSEYKVTVPRDAPSSTTVIKTTAVDED-EGSNADIVYTI-------------ES 2630
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
++HF I + KE I + L Y+ ++A D G+PP+++
Sbjct: 2631 DIDHFEI--HSLSGAIVTKESLIGLENGL--------YSFFVKAKDSGSPPKQS 2674
>gi|363733446|ref|XP_420617.3| PREDICTED: protocadherin Fat 4 [Gallus gallus]
Length = 5019
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y ++ EN G+ ++ DAD G NS++S+S+ GD +G+F IDN G
Sbjct: 1974 NPPVFSMTSYSTSLMENLAPGSAILNFSVTDADD-GSNSQLSFSIASGDSMGHFGIDNSG 2032
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L+ + + LDRE Y+L ++ D P Y +T +
Sbjct: 2033 VLS---------------------IQQPLDRESQSF-YSLVVQVHDMAPLPASRYTSTAQ 2070
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 6/113 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF VY+ + E P+G+ V L A D D G+N+ + YS+ G+ LG+F I L
Sbjct: 482 PVFEQSVYRVNISEEVPLGSYVRGLTATDRD-SGLNANLRYSIVSGNELGWFHISEHSGL 540
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ GT V LDRE L + A D+G P+ +Y
Sbjct: 541 ----VTTAGPGSGTAGHAGGASVTSGLDRETTS-QVVLNISARDQGVQPKFSY 588
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y+ ++EN GT +I + A D D G N ++ YS+ GD F ID+
Sbjct: 2184 NNPLFAQKLYRVELEENTLTGTDLIQVLATDGD-EGTNGQVRYSIVSGDTGNQFRIDSVT 2242
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I V K LDRE P Y L++++ D+G+ PR
Sbjct: 2243 GV--------------------ITVAKPLDREKKP-SYMLSVQSSDRGSSPR 2273
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 60/110 (54%), Gaps = 15/110 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS +YQA V E+ P+G V+ + AADAD G N+ I Y + GGDG G +
Sbjct: 231 NPPVFSQTLYQARVPEDAPVGASVLQVAAADAD-EGTNADIRYRLEGGDGGGGEGASS-- 287
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+P ++DP + I + + LD E+ Y+LT++A D+G P
Sbjct: 288 -------LPFEVDPESGV----IRIRERLDYELCQ-QYSLTVQATDRGVP 325
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F V EN +G LV ++ A D+D G N+ + YS+ G + G F+
Sbjct: 1345 NSPSFPKSTLSVDVLENMRVGELVSSVTATDSD-SGDNADLHYSITGTNNHGTFS----- 1398
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1399 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1436
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y+ T+ E++P+ + + A D D G+N +I+YS+ G+ F I +G
Sbjct: 1026 NPPVFDQLSYEITILESEPVNSRFFKVHATDKD-SGVNGEIAYSIIEGNAGDAFGIFPDG 1084
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D + +E I+++ DR + PL + + +
Sbjct: 1085 QL----YIKSELD--RELQERYILLVVASDRAVEPLNATVNITVI 1123
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ Y + E P GT V + A D+D S+ SY + G+ F+
Sbjct: 3436 PVFTLGTYNIQISEGVPPGTHVTFVSAFDSDSVPSWSRFSYFIGSGNDNSAFS------- 3488
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + + V LDRE P+ YNL++ A+D GTP
Sbjct: 3489 ---------INPQTGQ----VTVTAELDRETLPV-YNLSVLAIDSGTP 3522
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 48/105 (45%), Gaps = 25/105 (23%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN GT+V L +DAD P N IS S+ G+ +F + H VP
Sbjct: 359 ASVDENAAPGTVVALLTVSDADSPAANGNISVSILAGNEQRHFEV-------HSSKVP-- 409
Query: 73 IDPGTKKKEYNIVVLKL---LDREIAPLGYNLTLRAVDK--GTPP 112
N+ ++K+ LDRE P YNLT+ D +PP
Sbjct: 410 ----------NLSLIKVAAALDRERIP-AYNLTVAVADNYGASPP 443
Score = 41.6 bits (96), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 46/108 (42%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF Y A ++EN+P GT V T+ A D D G N + YS+ GD + G
Sbjct: 719 NSPVFYPVQYFAHIQENEPAGTYVTTVSATDPD-MGPNGTVKYSISAGDTSRFQVHGKTG 777
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
I+ TKI LDRE Y L + A D G
Sbjct: 778 ------IITTKI---------------ALDRE-EKTAYQLQIVATDGG 803
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+P FS Y V EN P GT VI L A+DAD G N+ I+Y+++ D F ID
Sbjct: 3224 NSPTFSPEDYFPNVLENAPSGTTVIRLNASDAD-SGPNAVIAYAIQSSDS-DLFVID 3278
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 50/117 (42%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMN--SKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G +I A DAD G N SY + G+ G F ++
Sbjct: 116 NAPVFPDPSIVVTFKEDTGSGRQLILDTATDAD-SGTNGVDHSSYRIVSGNEEGRFRLN- 173
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE P Y L ++ DKG P R Y
Sbjct: 174 -----------ITLNPSGEGAFLHLVSQGGLDREATP-SYQLLVQVEDKGEPRRRGY 218
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F +YQAT+ E T V+ + A+D D G N I YSV G+ F ID+
Sbjct: 1240 NAPKFLKDLYQATISELAANLTQVLRVSASDVD-EGTNGLIHYSVIKGNEEKQFAIDS-- 1296
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ ++ LD E A Y+L ++AVD G
Sbjct: 1297 ------------------STGQVTLVGKLDHE-ATASYSLVIQAVDSG 1325
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 21/98 (21%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKI 73
++ EN P+G+ VI++ A D+D +N +++Y++ I NHFRI +
Sbjct: 1462 SIIENIPVGSSVISVTANDSD-ADINGQLTYAI----------IQQTPRGNHFRIDEVR- 1509
Query: 74 DPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
GT I +DRE A L + LT++A D+ P
Sbjct: 1510 --GT------IFTNAEIDREFANL-FELTVKATDQAVP 1538
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 25/108 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS ++ A+V EN P+G V + +D D GMN+ YS+R
Sbjct: 2803 NAPRFSQ-IFSASVPENAPLGFTVTRVTTSDED-IGMNAISRYSIRDTS----------- 2849
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+P I+P T +I V +LL+RE Y + + A D G
Sbjct: 2850 -------LPFVINPSTG----DITVSRLLNREDTDR-YRIRVSAHDSG 2885
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVFS +Y V EN +G V T+ A+ D +N+ ISY + GD G F I+
Sbjct: 823 NPPVFSQGMYGFVVFENVALGYHVGTVFASTMD---LNTNISYLITTGDQRGMFAIN 876
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 2 NAPVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD----GLGYFT 56
N P FS YQ ++ EN P GT ++ L A D D G N I +S++ + +G +
Sbjct: 601 NKPRFSQPEGYQVSLAENSPSGTELLVLSAVDGD-LGDNGTIRFSLQEAEPAVVAVGPSS 659
Query: 57 IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ P FR +DP + K + + LDRE ++L + A D G+PP
Sbjct: 660 VT---PRQVFR-----LDPVSGK----LSTISQLDRE-EQAHFSLQVLATDLGSPP 702
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD-PPGMNSKISYSVRGGDGLGYFTIDNE 60
N P S Q V EN GTLV+TL+++D D PP Y + G YF++
Sbjct: 3540 NGPTLS--TRQGEVMENNRAGTLVMTLQSSDPDLPPNQGPFTYYLLSTGPATSYFSLSTA 3597
Query: 61 GPLNHFR 67
G L R
Sbjct: 3598 GVLTTTR 3604
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 26/110 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ +Y ATV E+ P GT ++ + ++DAD + + +R G FT
Sbjct: 2394 NVPTFAFNMYSATVPEDAPTGTDILLVNSSDAD-----ASRNAVIRLTGGNSQFT----- 2443
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I+ LLDRE Y L + A D G P
Sbjct: 2444 -----------INPSTGQ----IITSALLDRETRE-NYTLIVVASDGGYP 2477
>gi|345319784|ref|XP_003430203.1| PREDICTED: protocadherin gamma-A4-like, partial [Ornithorhynchus
anatinus]
Length = 621
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
NAPVF+ VYQ V+EN P+GT V+T+ A D D G+NS+++YS R
Sbjct: 47 NAPVFTQSVYQVMVRENAPVGTQVVTVNATDPD-EGVNSEVTYSFR 91
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP + ++V E+ P GT++ L D D G DGL +I +
Sbjct: 152 NAPEVTITSLTSSVPEDSPPGTVIALLNVHDRD------------SGDDGLVTCSIPDNL 199
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
P F++ + Y++V LDRE+ P YN+T+ A D+G+PP +
Sbjct: 200 P---FKL------KKSYGNYYSLVTENALDRELIPY-YNVTVIATDRGSPPLSAH 244
>gi|157128514|ref|XP_001661464.1| cadherin [Aedes aegypti]
gi|108872553|gb|EAT36778.1| AAEL011164-PA, partial [Aedes aegypti]
Length = 2413
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 57/110 (51%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS Y T+ E+ +GTLV + A DAD G+N KI YS ID+
Sbjct: 877 NPPDFSMNPYSVTLPEDAEVGTLVTKIHATDAD-IGINRKIKYSF----------IDSY- 924
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+HF+I P D G + + K LDRE+ + YNLT+RA D+G P
Sbjct: 925 -RDHFKIAP---DSGI------VTLAKPLDREVKAV-YNLTVRATDQGKP 963
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y AT++E+ G ++ ++A D D G NS++SY + GD +G F I+
Sbjct: 1086 NPPQFTANSYTATIREDAQKGDKMLQIRANDMDS-GENSRVSYRIERGDRMGQFDIEE-- 1142
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
D G I V LDRE + Y L ++A D G+P TY
Sbjct: 1143 ------------DTGY------ISVAGTLDRE-SISSYVLEVQARDHGSPSLSTY 1178
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y A+V EN IGT V+ + A D G+N++I+YS+ GG+ F + N+
Sbjct: 981 NPPEFTSKHYFASVLENSSIGTEVLRVLATSKD-TGINAEITYSIIGGNEHRKFAMHNKT 1039
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ + + ++D E A Y LT++AVD GTPP
Sbjct: 1040 GV--------------------LYLADVVDYERAK-DYFLTIQAVDGGTPP 1069
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 22/109 (20%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F Y V ENQ G LV T+KA D D G +++Y + + YF+ID
Sbjct: 253 LHNPTFEHLFYDVKVNENQLAGRLVTTVKAQDKD-FGEFGRLTYFIISDEIQEYFSID-- 309
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
K + IV K LDRE L Y + + A+D G
Sbjct: 310 ------------------KDKGEIVTKKKLDREERKL-YEVPIMAMDSG 339
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F + Y+A+V E+ GT+V+ ++ D D + + I Y + GD L F I N G +
Sbjct: 674 PTFKESHYKASVSEDALPGTVVLQIETTDKD-VDLKTNIEYYIISGDPLSQFQIKNSGEV 732
>gi|195576483|ref|XP_002078105.1| GD22718 [Drosophila simulans]
gi|194190114|gb|EDX03690.1| GD22718 [Drosophila simulans]
Length = 3385
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 55/113 (48%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQ--PIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P F D Y A V EN P G V+T+ A DAD P +NS++ Y ++ GD
Sbjct: 924 NRPTFLDSPYLARVMENTVPPNGGYVLTVNAYDADTPPLNSQVRYFLKEGDS-------- 975
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ FRI + D I +LK LDRE Y LTL A+D G+PP
Sbjct: 976 ----DLFRINASSGD---------IALLKPLDREQQS-EYTLTLVAMDTGSPP 1014
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 56/115 (48%), Gaps = 24/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV+EN P GT V+T +A D D G+N+K+ +++ G+ + F ID+E
Sbjct: 1031 NDPVFELQSYHATVRENLPAGTHVLTPRATDKD-EGLNAKLRFNLL-GEHMHRFHIDSET 1088
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG-TPPRET 115
I LDRE P+ Y+LTL A D T PR +
Sbjct: 1089 G--------------------EISTATTLDREETPV-YHLTLMAQDSSITEPRAS 1122
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 48/110 (43%), Gaps = 21/110 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y +T+ E P+GT V T+KA D D N++ SYS+ G+ F ID
Sbjct: 2019 PEFIKHYYTSTISEAAPVGTKVTTVKAIDKDVRAQNNQFSYSIINGNLKQSFKID----- 2073
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ G I LDRE YNL + A+D G PP+
Sbjct: 2074 ---------VQTG------EISTASRLDREETST-YNLVIGAIDTGLPPQ 2107
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F Y + V EN PI T V+T+ A D D G N I YS+ GD F ID+ G
Sbjct: 567 NAPIFDPMSYSSEVFENVPIATEVVTVSAKDID-SGNNGLIEYSITAGDVDSEFGIDSNG 625
Query: 62 PLNHFR 67
+ R
Sbjct: 626 TIRTRR 631
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 58/145 (40%), Gaps = 35/145 (24%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N+PVF Y A+V EN IG +V+ + A D D G N +I YS+ GD F+I +
Sbjct: 818 NSPVFDPKQYSASVAENASIGAMVLQVSATDVD-EGANGRIRYSIVMGDQNHDFSISEDT 876
Query: 61 ------GPLNHFRIVPTKI----------DPGTKKKEYNIVVLKLLDREIAPL------- 97
LN+ R+ + +P E I +L + D L
Sbjct: 877 GVVRVAKNLNYERLSRYSLTVRAEDCALENPAGDTAELTINILDINDNRPTFLDSPYLAR 936
Query: 98 ----------GYNLTLRAVDKGTPP 112
GY LT+ A D TPP
Sbjct: 937 VMENTVPPNGGYVLTVNAYDADTPP 961
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++ P F+ YQ V EN+P+G+ ++T+ A D D G N + YS+ GG+ F++D
Sbjct: 1744 LDTPRFTVNSYQVIVPENEPVGSTILTVGATDGD-TGPNGMLRYSISGGNERQDFSVD 1800
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 20/114 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR--GGDGLGYFTIDNEG 61
PVF + + EN I T+VI +KA D D G N I Y ++ G + +G
Sbjct: 709 PVFVS-ANETAIMENVAINTVVIAVKAVDNDE-GRNGYIDYLMKEAGDEDMG-----QSD 761
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
PL P ++P + + V+ LDRE+ Y L + A D+G PP+ T
Sbjct: 762 PL------PFSLNP----TDGQLRVVDALDRELRS-SYLLNITARDRGEPPQST 804
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P F + EN+P GT ++TL A+D D P +Y + GG + ++D
Sbjct: 2123 NGPTFMPEGLNGYISENEPAGTSIMTLMASDPDLPRNGGPFTYQLVGGKHKTWLSVD 2179
>gi|194855946|ref|XP_001968648.1| GG24390 [Drosophila erecta]
gi|190660515|gb|EDV57707.1| GG24390 [Drosophila erecta]
Length = 5150
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 55/113 (48%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQ--PIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P F D Y A V EN P G V+T+ A DAD P +NS++ Y ++ GD
Sbjct: 2379 NRPTFLDSPYLARVMENTVPPNGGYVLTVNAYDADTPPLNSQVRYFLKEGDS-------- 2430
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ FRI + D I +LK LDRE Y LTL A+D G+PP
Sbjct: 2431 ----DLFRINASSGD---------IALLKPLDRE-QQREYTLTLVAMDTGSPP 2469
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 50/111 (45%), Gaps = 23/111 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y +T+ E PIGT V T+KA D D N++ SYS+ G+ F ID
Sbjct: 3542 PEFIKHYYTSTISEAAPIGTKVTTVKAVDKDVRSQNNQFSYSIINGNLKQSFKID----- 3596
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDR-EIAPLGYNLTLRAVDKGTPPR 113
+ G I LDR EIA YNL + A+D G PP+
Sbjct: 3597 ---------VQTG------EISTASRLDREEIAT--YNLVIGAIDTGLPPQ 3630
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 55/115 (47%), Gaps = 24/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV+EN P GT V+T KA D D G+N+K+ +++ G+ + F ID+E
Sbjct: 2486 NDPVFELQSYHATVRENLPAGTHVLTPKATDKD-EGLNAKLRFNLL-GEHMHRFHIDSET 2543
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG-TPPRET 115
I LDRE + Y+LTL A D T PR +
Sbjct: 2544 G--------------------EISTATTLDREETSV-YHLTLMAQDSSITEPRAS 2577
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F Y + V EN P+ T V+T+ A D D G N I YS+ GD F ID+ G
Sbjct: 2022 NAPIFDPMSYSSEVFENVPLATEVVTVSAKDID-SGNNGLIEYSITAGDVDSEFRIDSNG 2080
Query: 62 PLNHFR 67
+ R
Sbjct: 2081 TIRTRR 2086
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 22/104 (21%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
ATV EN GT+V + D+D G+N + S + G+ LG+F ++ L+ R
Sbjct: 394 ATVDENAVNGTVVAAVAVKDSDS-GLNGRTSVRIVSGNELGHFRLEEAADLHIVR----- 447
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVDKGTPPRET 115
V +LDRE +G YNLT+ A+D+GTP R T
Sbjct: 448 -------------VNGVLDRE--EIGKYNLTVVAMDQGTPARTT 476
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
+ AP FS YQ V EN+P+G++++T+ A D D G N + YS+ GG+ F++D
Sbjct: 3223 LKAPGFSVNSYQVIVPENEPVGSIILTVGATDED-TGPNGMLRYSISGGNERQDFSVD 3279
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 58/145 (40%), Gaps = 35/145 (24%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N+PVF Y A+V EN IG +V+ + A D D G N +I YS+ GD F+I +
Sbjct: 2273 NSPVFDPKQYSASVAENASIGAMVLQVSATDVD-EGANGRIRYSIVLGDQNHDFSISEDT 2331
Query: 61 ------GPLNHFRIVPTKI----------DPGTKKKEYNIVVLKLLDREIAPL------- 97
LN+ R+ + +P E I +L + D L
Sbjct: 2332 GVVRVAKNLNYERLARYSLTVRAEDCALENPAGDTAELTINILDINDNRPTFLDSPYLAR 2391
Query: 98 ----------GYNLTLRAVDKGTPP 112
GY LT+ A D TPP
Sbjct: 2392 VMENTVPPNGGYVLTVNAYDADTPP 2416
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF Y A + E P G+ V ++ A D D G+N+++ Y + G+ L +F +D
Sbjct: 490 HEPVFEKSEYSAVLSELAPTGSFVASITATDED-TGVNAQVHYDILSGNELKWFAMD--- 545
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
PL IV LDREI L++ A D G P+ Y
Sbjct: 546 PLTGL-----------------IVTTGALDREIRDT-VELSISARDGGPNPKFAY 582
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAP F+ + +V E P GT ++ +A+DAD G+NS++ +S+ G+ F ID+
Sbjct: 1379 NAPEFTQSSSEVSVLETSPTGTELMRFRASDAD-QGVNSQVVFSISAGNRRDTFHIDS 1435
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P F+ V EN+P GT ++TL A+D D P +Y + GG + ++D
Sbjct: 3646 NGPTFTTEGLNGYVSENEPPGTSIMTLMASDPDLPRNGGPFTYQLVGGKHKSWLSVD 3702
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
NAP F Y T+ E GT + + DAD G+N + Y++ G+ G F++D
Sbjct: 1273 NAPEFLRAPYHVTISEGASEGTHITHVFTQDAD-EGLNGDVYYTLAKGNEAGQFSLDGAT 1331
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLK 88
G L+ R ++D +++ + +VV K
Sbjct: 1332 GQLSLAR----RLDRESQEIHHLVVVAK 1355
>gi|195114028|ref|XP_002001569.1| GI16125 [Drosophila mojavensis]
gi|193912144|gb|EDW11011.1| GI16125 [Drosophila mojavensis]
Length = 5013
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 57/122 (46%), Gaps = 24/122 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F D Y +T+ E+ P+G++V T+KA D D N+ +YS+ G+ F ID E
Sbjct: 3395 PEFVDRFYTSTILESAPVGSVVTTVKAIDKDVRPQNNHFTYSIINGNLKQSFKIDAESG- 3453
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDRE-IAPLGYNLTLRAVDKGTPPRETYKATPRN 122
I LLDRE IA YNL + A+D G PP +T AT R
Sbjct: 3454 -------------------EITTAALLDREDIA--HYNLVIGAIDTGLPP-QTGTATVRI 3491
Query: 123 GL 124
L
Sbjct: 3492 NL 3493
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 55/115 (47%), Gaps = 24/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV+EN PIG+LV+ A D D G+N+KI +++ G
Sbjct: 2338 NGPVFELQYYHATVQENLPIGSLVLKPVATDKD-VGLNAKIRFNLLGEH----------- 2385
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG-TPPRET 115
+NHF I D G I +LDRE + Y LTL A D T PR T
Sbjct: 2386 -MNHFHI---DTDTG------EISTAAVLDRESIGV-YQLTLMAQDSSITEPRAT 2429
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF Y A + E P GT V ++ A D D G+N+++ Y + G+ L +F ID
Sbjct: 374 HEPVFEKSEYSAVLSELAPTGTFVASIAATDED-TGVNAQVYYEILTGNELKWFNIDTTT 432
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
L +V LDRE+ L++ A D G P+ Y
Sbjct: 433 GL--------------------VVTAGPLDREMQA-SVELSISARDGGPNPKFAY 466
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 22/104 (21%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
ATV EN GT+V + D+D G N + S + G+ LNHFR+ T
Sbjct: 278 ATVDENAVNGTVVAAVSVIDSDD-GPNGETSTRIVSGN-----------ELNHFRLEKTP 325
Query: 73 IDPGTKKKEYNIV-VLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ ++IV V +LDRE YNLT+ A DKGTP R++
Sbjct: 326 L--------FHIVRVNGVLDREEIS-KYNLTVVATDKGTPERKS 360
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 23/106 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F Y + + EN PIG V+T+ A D D G N I +S+ GD F I + G
Sbjct: 1868 NTPLFDPMSYSSEIFENVPIGMEVVTVSAKDID-SGKNGLIEFSITAGDDNNDFEIHSNG 1926
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
++ T+++ LDRE GY LT+ A D
Sbjct: 1927 TIS------------TRRQ---------LDREQRS-GYTLTVTARD 1950
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 24/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN-E 60
NAP F+ + +V E P GT ++ +A+DAD G+NS++ +S+ G+ F ID+
Sbjct: 1211 NAPEFTQSSSEISVLETSPSGTELMRFRASDAD-QGVNSQVVFSITAGNRRDTFHIDSIS 1269
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
G L + K LD E Y L + A D GTPP T
Sbjct: 1270 GSL---------------------YLHKSLDYEDI-TSYTLNITASDCGTPPLST 1302
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N PVF Y A+V EN IG +V+ + A D D G N ++ YS+ GD F+I +
Sbjct: 2123 NIPVFDPKQYSASVAENASIGAMVLQVSATDMD-EGDNGRVRYSIVSGDQNRDFSISED 2180
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 51/111 (45%), Gaps = 22/111 (19%)
Query: 4 PVFSDFVYQATVKENQ--PIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
P F D Y V EN P ++T+KA DAD P +NS++ Y ++ G+
Sbjct: 2231 PTFLDSPYITRVMENTLPPNDGYLLTVKAYDADTPPLNSQVRYFLKEGNATK-------- 2282
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ FRI IV+L LDRE Y LTL A+D G+PP
Sbjct: 2283 --DLFRI---------NASTGEIVLLTPLDRE-QQSEYILTLVAMDTGSPP 2321
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 48/110 (43%), Gaps = 16/110 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQ T+ E P GT ++ + DAD G+N + YS+ G+ F++D+
Sbjct: 1105 NAPEFLRAPYQVTISEGAPEGTHIMHVFTQDAD-EGLNGDVYYSLAAGNEANLFSLDSAT 1163
Query: 62 ---PLNH---------FRIVPTKIDPGTK---KKEYNIVVLKLLDREIAP 96
L H R+V D K K NI + L D + AP
Sbjct: 1164 GLLTLAHRLDRESQEIHRLVVVAKDAALKNPLKSTANITITVLDDNDNAP 1213
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
+AP F YQ V EN+PIG+ ++T+ A D D G N + Y++ G+ F ++
Sbjct: 3077 HAPEFKPLSYQVIVPENEPIGSTILTVSATDKD-NGPNGMLHYNIVDGNDSENFNVN 3132
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P F+ + EN+P GT ++TL A D D P SY + GG + T+D
Sbjct: 3499 NGPTFTSEGLIGYIPENEPAGTSIMTLTATDPDLPENGPPFSYKIVGGRHKSWLTVD 3555
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 45/110 (40%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PV +Y A V E + ++ +KA D D G N ++SY ++ D G F I++ G
Sbjct: 2657 NPPVMEKLIYNAEVLEEESPPQFIVAIKAIDKD-SGDNGEVSYLLK-NDYNGIFEINSSG 2714
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I LDRE Y L + AVD+G P
Sbjct: 2715 ---------------------EIYTTMQLDREEMS-DYALVVEAVDQGVP 2742
>gi|17352473|ref|NP_477497.1| fat [Drosophila melanogaster]
gi|13124727|sp|P33450.3|FAT_DROME RecName: Full=Cadherin-related tumor suppressor; AltName:
Full=Protein fat; Flags: Precursor
gi|7295732|gb|AAF51036.1| fat [Drosophila melanogaster]
Length = 5147
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 55/113 (48%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQ--PIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P F D Y A V EN P G V+T+ A DAD P +NS++ Y ++ GD
Sbjct: 2380 NRPTFLDSPYLARVMENTVPPNGGYVLTVNAYDADTPPLNSQVRYFLKEGDS-------- 2431
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ FRI + D I +LK LDRE Y LTL A+D G+PP
Sbjct: 2432 ----DLFRINASSGD---------IALLKPLDREQQS-EYTLTLVAMDTGSPP 2470
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F Y + V EN PI T V+T+ A D D G N I YS+ GD F ID+ G
Sbjct: 2023 NAPIFDPMSYSSEVFENVPIATEVVTVSAKDID-SGNNGLIEYSITAGDVDSEFGIDSNG 2081
Query: 62 PLNHFR 67
+ R
Sbjct: 2082 TIRTRR 2087
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 48/110 (43%), Gaps = 21/110 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y +T+ E P+GT V T+KA D D N++ SYS+ G+ F ID
Sbjct: 3543 PEFIKHYYTSTISEAAPVGTKVTTVKAIDKDVRTQNNQFSYSIINGNLKQSFKID----- 3597
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ G I LDRE YNL + A+D G PP+
Sbjct: 3598 ---------VQTG------EISTASRLDREETST-YNLVIGAIDTGLPPQ 3631
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 22/104 (21%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
ATV EN GT+V + D+D G+N + S + G+ LG+F ++ L+ R
Sbjct: 394 ATVDENAVNGTVVAAVAVKDSDS-GLNGRTSVRIVSGNELGHFRLEEAADLHIVR----- 447
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVDKGTPPRET 115
V +LDRE +G YNLT+ A+D+GTP R T
Sbjct: 448 -------------VNGVLDRE--EIGKYNLTVVAMDQGTPARTT 476
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 55/115 (47%), Gaps = 24/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV+EN P GT V+T +A D D G+N+K+ +++ G+ + F ID+E
Sbjct: 2487 NDPVFELQSYHATVRENLPSGTHVLTPRATDKD-EGLNAKLRFNLL-GEHMHRFHIDSET 2544
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG-TPPRET 115
I LDRE + Y+LTL A D T PR +
Sbjct: 2545 G--------------------EISTATTLDREETSV-YHLTLMAQDSSITEPRAS 2578
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
M+ P FS YQ V EN+P+G+ ++T+ A D D G N + YS+ GG+ F++D
Sbjct: 3224 MDTPRFSVNSYQVIVPENEPVGSTILTVGATD-DDTGPNGMLRYSISGGNERQDFSVD 3280
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 58/145 (40%), Gaps = 35/145 (24%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N+PVF Y A+V EN IG +V+ + A D D G N +I YS+ GD F+I +
Sbjct: 2274 NSPVFDPKQYSASVAENASIGAMVLQVSATDVD-EGANGRIRYSIVLGDQNHDFSISEDT 2332
Query: 61 ------GPLNHFRIVPTKI----------DPGTKKKEYNIVVLKLLDREIAPL------- 97
LN+ R+ + +P E I +L + D L
Sbjct: 2333 GVVRVAKNLNYERLSRYSLTVRAEDCALENPAGDTAELTINILDINDNRPTFLDSPYLAR 2392
Query: 98 ----------GYNLTLRAVDKGTPP 112
GY LT+ A D TPP
Sbjct: 2393 VMENTVPPNGGYVLTVNAYDADTPP 2417
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF Y A + E P G+ V ++ A D D G+N+++ Y + G+ L +F++D
Sbjct: 490 HEPVFEKSEYSAVLSELAPTGSFVASITATDED-TGVNAQVHYDILSGNELKWFSMD--- 545
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
PL IV LDREI L++ A D G P+ Y
Sbjct: 546 PLTGL-----------------IVTTGPLDREIRDT-VELSISARDGGPNPKFAY 582
Score = 42.4 bits (98), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAP F+ + +V E P GT ++ +A+DAD G+NS++ +S+ G+ F ID+
Sbjct: 1380 NAPEFTQSSSEVSVLETSPTGTELMRFRASDAD-QGVNSQVVFSISAGNRRDTFHIDS 1436
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
NAP F Y T+ E GT + + DAD G+N + YS+ G+ G F +D+
Sbjct: 1274 NAPEFLRAPYHVTISEGASEGTHITHVFTQDAD-EGLNGDVYYSLAKGNEAGQFNLDSAT 1332
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLK 88
G L+ R ++D +++ + IVV K
Sbjct: 1333 GQLSLGR----RLDRESQEIHHLIVVAK 1356
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
N PVF+ Y + EN+P+GT V AAD D P N+ I Y+
Sbjct: 3330 NPPVFNHKEYHCYIPENKPVGTFVFQAHAADKDSP-KNAIIHYA 3372
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P F+ + EN+P GT ++TL A+D D P +Y + GG + ++D
Sbjct: 3647 NGPTFTPEGLNGYISENEPAGTSIMTLIASDPDLPRNGGPFTYQLIGGKHKSWLSVD 3703
>gi|157409|gb|AAA28530.1| fat protein [Drosophila melanogaster]
Length = 5147
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 55/113 (48%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQ--PIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P F D Y A V EN P G V+T+ A DAD P +NS++ Y ++ GD
Sbjct: 2380 NRPTFLDSPYLARVMENTVPPNGGYVLTVNAYDADTPPLNSQVRYFLKEGDS-------- 2431
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ FRI + D I +LK LDRE Y LTL A+D G+PP
Sbjct: 2432 ----DLFRINASSGD---------IALLKPLDREQQS-EYTLTLVAMDTGSPP 2470
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F Y + V EN PI T V+T+ A D D G N I YS+ GD F ID+ G
Sbjct: 2023 NAPIFDPMSYSSEVFENVPIATEVVTVSAKDID-SGNNGLIEYSITAGDVDSEFGIDSNG 2081
Query: 62 PLNHFR 67
+ R
Sbjct: 2082 TIRTRR 2087
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 48/110 (43%), Gaps = 21/110 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y +T+ E P+GT V T+KA D D N++ SYS+ G+ F ID
Sbjct: 3543 PEFIKHYYTSTISEAAPVGTKVTTVKAIDKDVRTQNNQFSYSIINGNLKQSFKID----- 3597
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ G I LDRE YNL + A+D G PP+
Sbjct: 3598 ---------VQTG------EISTASRLDREETST-YNLVIGAIDTGLPPQ 3631
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 22/104 (21%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
ATV EN GT+V + D+D G+N + S + G+ LG+F ++ L+ R
Sbjct: 394 ATVDENAVNGTVVAAVAVKDSDS-GLNGRTSVRIVSGNELGHFRLEEAADLHIVR----- 447
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVDKGTPPRET 115
V +LDRE +G YNLT+ A+D+GTP R T
Sbjct: 448 -------------VNGVLDRE--EIGKYNLTVVAMDQGTPARTT 476
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 55/115 (47%), Gaps = 24/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV+EN P GT V+T +A D D G+N+K+ +++ G+ + F ID+E
Sbjct: 2487 NDPVFELQSYHATVRENLPSGTHVLTPRATDKD-EGLNAKLRFNLL-GEHMHRFHIDSET 2544
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG-TPPRET 115
I LDRE + Y+LTL A D T PR +
Sbjct: 2545 G--------------------EISTATTLDREETSV-YHLTLMAQDSSITEPRAS 2578
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
M+ P FS YQ V EN+P+G+ ++T+ A D D G N + YS+ GG+ F++D
Sbjct: 3224 MDTPRFSVNSYQVIVPENEPVGSTILTVGATD-DDTGPNGMLRYSISGGNERQDFSVD 3280
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 58/145 (40%), Gaps = 35/145 (24%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N+PVF Y A+V EN IG +V+ + A D D G N +I YS+ GD F+I +
Sbjct: 2274 NSPVFDPKQYSASVAENASIGAMVLQVSATDVD-EGANGRIRYSIVLGDQNHDFSISEDT 2332
Query: 61 ------GPLNHFRIVPTKI----------DPGTKKKEYNIVVLKLLDREIAPL------- 97
LN+ R+ + +P E I +L + D L
Sbjct: 2333 GVVRVAKNLNYERLSRYSLTVRAEDCALENPAGDTAELTINILDINDNRPTFLDSPYLAR 2392
Query: 98 ----------GYNLTLRAVDKGTPP 112
GY LT+ A D TPP
Sbjct: 2393 VMENTVPPNGGYVLTVNAYDADTPP 2417
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF Y A + E P G+ V ++ A D D G+N+++ Y + G+ L +F++D
Sbjct: 490 HEPVFEKSEYSAVLSELAPTGSFVASITATDED-TGVNAQVHYDILSGNELKWFSMD--- 545
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
PL IV LDREI L++ A D G P+ Y
Sbjct: 546 PLTGL-----------------IVTTGPLDREIRDT-VELSISARDGGPNPKFAY 582
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAP F+ + +V E P GT ++ + +DAD G+NS++ +S+ G+ F ID+
Sbjct: 1380 NAPEFTQSSSEVSVLETSPTGTELMRFRGSDAD-QGVNSQVVFSISAGNRRDTFHIDS 1436
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
NAP F Y T+ E GT ++ + DAD G+N + YS+ G+ G F +D+
Sbjct: 1274 NAPEFLRAPYHVTISEGASEGTHIMHVFTQDAD-EGLNGDVYYSLAKGNEAGQFNLDSAT 1332
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLK 88
G L+ R ++D +++ + IVV K
Sbjct: 1333 GQLSLAR----RLDRESQEIHHLIVVAK 1356
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P F+ + EN+P GT ++TL A+D D P +Y + GG + ++D
Sbjct: 3647 NGPTFTPEGLNGYISENEPAGTSIMTLMASDPDLPRNGGPFTYQLIGGKHKSWLSVD 3703
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
N PVF+ Y + EN+P+GT V A D D P N+ I Y+
Sbjct: 3330 NPPVFNHKEYHCYIPENKPVGTFVFQAHATDKDSP-KNAIIHYA 3372
>gi|195471220|ref|XP_002087903.1| GE14764 [Drosophila yakuba]
gi|194174004|gb|EDW87615.1| GE14764 [Drosophila yakuba]
Length = 5024
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 55/113 (48%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQ--PIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P F D Y A V EN P G V+T+ A DAD P +NS++ Y ++ GD
Sbjct: 2258 NRPTFLDSPYLARVMENTVPPNGGYVLTVNAYDADTPPLNSQVRYFLKEGDS-------- 2309
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ FRI + D I +LK LDRE Y LTL A+D G+PP
Sbjct: 2310 ----DLFRINASSGD---------IALLKPLDREQQS-EYTLTLVAMDTGSPP 2348
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 48/110 (43%), Gaps = 21/110 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y +T+ E PIGT V T+KA D D N++ SYS+ G+ F ID
Sbjct: 3421 PEFIKHYYTSTISEAAPIGTKVTTVKAIDKDVRAQNNQFSYSIINGNLKHSFKID----- 3475
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ G I LDRE YNL + A+D G PP+
Sbjct: 3476 ---------VQTG------EISTASRLDREEIST-YNLVIGAIDTGLPPQ 3509
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F Y + V EN PI T V+T+ A D D G N I YS+ GD F ID+ G
Sbjct: 1901 NAPIFDPMSYSSEVFENVPIATEVVTVSAKDID-SGNNGLIEYSITAGDVDSEFGIDSNG 1959
Query: 62 PLNHFR 67
+ R
Sbjct: 1960 TIRTRR 1965
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 22/104 (21%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
ATV EN GT+V + D+D G+N + S + G+ LG+F ++ L+ R
Sbjct: 388 ATVDENAVNGTVVAAVAVKDSDS-GLNGRTSVRIVSGNELGHFRLEEAADLHIVR----- 441
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVDKGTPPRET 115
V +LDRE +G YNLT+ A+D+GTP R T
Sbjct: 442 -------------VNGVLDRE--EIGKYNLTVVAMDQGTPARTT 470
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 55/115 (47%), Gaps = 24/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV+EN P GT V++ +A D D G+N+K+ +++ G+ + F ID+E
Sbjct: 2365 NDPVFELHSYHATVRENLPAGTHVLSPRATDKD-EGLNAKLRFNLL-GEHMHRFHIDSET 2422
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG-TPPRET 115
I LDRE + Y+LTL A D T PR +
Sbjct: 2423 G--------------------EISTATTLDREETAV-YHLTLMAQDSSITEPRAS 2456
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 58/145 (40%), Gaps = 35/145 (24%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N+PVF Y A+V EN IG +V+ + A D D G N +I YS+ GD F+I +
Sbjct: 2152 NSPVFDPKQYSASVAENASIGAMVLQVSATDVD-EGANGRIRYSIVLGDQNHDFSISEDT 2210
Query: 61 ------GPLNHFRIVPTKI----------DPGTKKKEYNIVVLKLLDREIAPL------- 97
LN+ R+ + +P E I +L + D L
Sbjct: 2211 GVVRVAKNLNYERLSRYSLTVRAEDCALENPAGDTAELTINILDINDNRPTFLDSPYLAR 2270
Query: 98 ----------GYNLTLRAVDKGTPP 112
GY LT+ A D TPP
Sbjct: 2271 VMENTVPPNGGYVLTVNAYDADTPP 2295
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++ P FS YQ V EN+P+G+ ++T+ A D D G N + YS+ GG+ F++D
Sbjct: 3102 LDTPRFSVNSYQVIVPENEPVGSTILTVGATD-DDTGPNGMLRYSISGGNERQDFSVD 3158
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF Y A + E P G+ V ++ A D D G+N+++ Y + G+ L +F++D
Sbjct: 484 HEPVFEKSEYSAVLSELAPTGSFVASITATDED-TGVNAQVHYDILSGNELKWFSMD--- 539
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
PL IV LDREI L++ A D G P+ Y
Sbjct: 540 PLTGL-----------------IVTTGPLDREIRDT-VELSISARDGGPNPKFAY 576
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAP F+ + +V E P GT ++ +A+DAD G+NS++ +S+ G+ F ID+
Sbjct: 1258 NAPEFTQSSSEVSVLETSPTGTELMRFRASDAD-QGVNSQVVFSISAGNRRDTFHIDS 1314
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P F+ + EN+P GT ++TL A+D D P +Y + GG + ++D
Sbjct: 3525 NGPTFTTEALNGYISENEPPGTSIMTLMASDPDLPRNGGPFTYQLIGGKHKSWLSVD 3581
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
NAP F Y T+ E GT + + DAD G+N + Y++ G+ G F +D+
Sbjct: 1152 NAPEFLRAPYHVTISEGASEGTHIAHVFTQDAD-EGLNGDVYYTLAKGNEAGQFNLDSAT 1210
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLK 88
G L+ R ++D +++ + IVV K
Sbjct: 1211 GQLSLAR----RLDRESQEIHHLIVVAK 1234
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 15/104 (14%)
Query: 12 QATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPT 71
+ + EN I T+VI +KA D D G N I Y ++ +D PL P
Sbjct: 2050 ETAIMENVAINTVVIAVKAVDNDE-GRNGYIDYLMKEASDEDMGQLD---PL------PF 2099
Query: 72 KIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
++P + + V+ LDRE+ Y L + A D+G PP+ T
Sbjct: 2100 SLNP----TDGQLRVVDALDRELRS-SYLLNITARDRGEPPQST 2138
Score = 35.0 bits (79), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
N PVF Y + EN+P+GT V A D D P N+ I Y+
Sbjct: 3208 NPPVFDQREYHGYIPENKPVGTFVFQAHATDKDSP-KNAIIHYA 3250
>gi|195153499|ref|XP_002017663.1| GL17301 [Drosophila persimilis]
gi|194113459|gb|EDW35502.1| GL17301 [Drosophila persimilis]
Length = 2716
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 43/112 (38%), Positives = 59/112 (52%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDNE 60
NAPVF + +YQ+++ E+ +GT VI + A+D D G+N +I Y + D G F ID
Sbjct: 1008 NAPVFKNPLYQSSILEDALVGTSVIQVSASDPD-IGLNGRIKYLLSDRDVEDGSFVID-- 1064
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PT GT + K LDRE + Y+LT AVDKG+PP
Sbjct: 1065 ---------PTS---GTVRTN------KGLDRESVAV-YHLTAIAVDKGSPP 1097
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 57/110 (51%), Gaps = 19/110 (17%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP+F + Y A+V E+ P+GT V+ + A D+D G+N++I+YS+ NE
Sbjct: 899 APIFENAPYSASVFEDAPVGTTVLVVSATDSD-VGINAQITYSL------------NEES 945
Query: 63 LNHF-RIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+N P I+P T IV LDRE GY LT+ A D G+P
Sbjct: 946 INGLGSPDPFSINPQTGA----IVTNAPLDRETTS-GYLLTVTAKDGGSP 990
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F +Q +V EN P+G +I ++A D+D G N++I+YS+ D DN
Sbjct: 690 NAPRFYTSQFQESVLENVPVGYNIIRVQAYDSD-EGPNAEITYSISERD-------DN-- 739
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P +DP T + +K LDRE + + A D G PP+
Sbjct: 740 -------FPLAVDPRTGW----VQTIKQLDRE-EQSRFAFQVVAKDGGVPPK 779
Score = 42.0 bits (97), Expect = 0.082, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F+ Y+A V E+QP GT V T+ A D P +S++ Y + G+ G F I ++
Sbjct: 795 NDPTFNPKYYEANVGEDQPQGTPVTTVTATD---PDEDSRLHYEITTGNTRGRFAITSQ 850
Score = 42.0 bits (97), Expect = 0.086, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 15/119 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG-GDGLGYFTIDNE 60
++P F ++A+++E +G+ VITL+A D D G N++I Y + DG G T D E
Sbjct: 465 HSPTFEAEQFEASIREGATVGSTVITLRATDQD-IGKNAEIEYGIETVTDGTGS-TQDQE 522
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
P+ FRI + I LDRE + Y+L + A D E AT
Sbjct: 523 LPI--FRI---------DSRSGVISTRSSLDRETSD-SYHLLVTASDMAAAQSERKTAT 569
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 25/115 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGT---LVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P FS+ Y V E+Q G+ V ++A DAD G N+ I Y++ GG+ F+ID
Sbjct: 582 NYPQFSERTYTVQVPEDQWGGSEDNTVAHIRATDADQ-GNNAAIRYAIIGGNTQSQFSID 640
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ ++ ++K LD E + Y L +RA D G+P R
Sbjct: 641 SMSG--------------------DVSLVKPLDYE-SVRSYRLVIRAQDGGSPSR 674
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT-IDNEGP 62
P F+ V EN P+G++V + A D D G+N+ + YS+ GGD F+ + G
Sbjct: 1116 PTFASDKITLYVPENSPVGSVVGEIHAHDPD-EGVNAVVHYSIIGGDDSNSFSLVTRPGS 1174
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVV 86
+ T++D + +K + +VV
Sbjct: 1175 ERAQLLTMTELDYESSRKRFELVV 1198
>gi|327261355|ref|XP_003215496.1| PREDICTED: protocadherin Fat 2-like [Anolis carolinensis]
Length = 1350
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 52/110 (47%), Gaps = 22/110 (20%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F F Y+ +V+EN P GT V+ + A D D G + +I Y +R G GL F I+
Sbjct: 1029 LHPPCFESFAYEGSVEENSPEGTFVMRVTAQDGD-KGKDGEIQYFIREGTGLAVFDIEK- 1086
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGT 110
D GT I LDRE P Y LT+ AVD G+
Sbjct: 1087 -------------DSGT------IFTTGPLDRESNP-HYWLTVLAVDLGS 1116
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 55/124 (44%), Gaps = 25/124 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ Y T EN P GT V+ +KA D D G +G +TI N+
Sbjct: 459 PVFTQSSYHGTFDENLPSGTSVLLMKATDGD------------SGENGFTTYTIANQ--- 503
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR---ETYKATP 120
+ VP IDP + I KL+D E+ Y+L + A D G+P R E Y +
Sbjct: 504 ---KNVPFVIDPFSGI----ISTTKLMDYELMQRWYHLRVWASDSGSPFRHQTEVYVSLI 556
Query: 121 RNGL 124
N L
Sbjct: 557 LNNL 560
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 48/123 (39%), Gaps = 23/123 (18%)
Query: 3 APVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
AP F D F V E+ P+ + + L A D D G N KI Y + G+ F ID E
Sbjct: 713 APQFDDTFPRSIDVMESVPLNSSITQLTARDNDT-GFNGKIVYVISSGNEDSCFYIDTET 771
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L ++V L D E Y L + D GTP + ++K
Sbjct: 772 GL--------------------LLVSSLFDHERTSF-YVLNITVYDLGTPQKSSWKLLAV 810
Query: 122 NGL 124
N L
Sbjct: 811 NIL 813
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
NAPVF VY T+ E+ IG VI +KA DAD N ++ YS
Sbjct: 818 NAPVFLQSVYLVTIPEDIKIGATVIVVKAEDADTND-NGRVKYS 860
>gi|444713162|gb|ELW54070.1| Protocadherin alpha-3 [Tupaia chinensis]
Length = 586
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 52/114 (45%), Gaps = 25/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR---GGDGLGYFTID 58
NAP F VY+ + EN P GTLV+ + A+D D G+N I YS D L F +D
Sbjct: 238 NAPTFEKTVYKVRLFENAPNGTLVVIVNASDLD-EGINKDIEYSFNTDISADILSKFHLD 296
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+N + V KID K Y + + A+DKGTPP
Sbjct: 297 ---PVNGYISVKGKIDFEETKS------------------YEIQVEAIDKGTPP 329
>gi|260832660|ref|XP_002611275.1| hypothetical protein BRAFLDRAFT_120347 [Branchiostoma floridae]
gi|229296646|gb|EEN67285.1| hypothetical protein BRAFLDRAFT_120347 [Branchiostoma floridae]
Length = 2655
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 55/120 (45%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y +V E G VI + A DAD G NS++ YS+ G+ F ID +
Sbjct: 1467 NAPRFDQDRYTTSVWEGNDRGMFVIQVSATDAD-SGTNSEVQYSIVSGNHDNAFVIDRDR 1525
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
I+ T + +DRE+ Y L LRAVDKGT PR T AT R
Sbjct: 1526 G-----IISTNV---------------RMDREVRD-SYRLELRAVDKGT-PRLTGSATLR 1563
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 20/112 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+APVF D Y TV ENQP ++ T+ A DAD G N ++ Y + G+ G F +D
Sbjct: 1044 HAPVFKDAEYMMTVPENQPNYGVIHTVVAYDAD-IGTNGQVRYEIIDGNVGGKFAVD--- 1099
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
E +++ + LDRE PL Y+L ++A D PR
Sbjct: 1100 ---------------AVTGELSVISDQALDRETVPL-YHLIVQAHDNTDAPR 1135
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 2 NAPVFSDF-VYQATVKENQPIGTLVITLKAADADPPGMNSKISY----SVRGGDGLGYFT 56
NAP FS Y V+E+QP GT VI + A D D G N I+Y S G +G F
Sbjct: 510 NAPYFSHSGQYLGEVEEHQPNGTEVIRVLADDPDN-GENGTITYRLVTSTPGMNGEEMFN 568
Query: 57 IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
I ++ L I LDRE P Y L++ AVD GTPPRE
Sbjct: 569 IHSQSGL--------------------ITTNAPLDREQKPT-YVLSVAAVDGGTPPRE 605
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+D YQ T++E+ +G+ VI + A D D G+N ++ Y + + G F IDN
Sbjct: 1151 NNPIFTDPSYQQTIQEDVSVGSTVIRVTAQDRD-EGVNGEVFYFL-SNETNGMFRIDNTS 1208
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ I +LLDRE + Y+ A D+G
Sbjct: 1209 GI--------------------ITTTRLLDREKQSV-YSFDAYASDRG 1235
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F YQA+V ENQ GT VI + A DAD G N ++Y++ G FTI+ +
Sbjct: 939 NQPRFLQDTYQASVSENQSPGTSVIQITALDAD-AGTNGVLTYNIPRGVAEDRFTIEEQ 996
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 50/112 (44%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y ++ EN P GT V T+ A DAD G N + +S+
Sbjct: 405 NDPRFTQESYHFSLVENLPTGTTVGTVFAVDAD-IGNNGDLDFSII-------------- 449
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P N I+ T G K + + LDRE Y+L L+ D+GTPPR
Sbjct: 450 PNNSSFIITTGHQRGVIKTK------RPLDRETTAR-YDLVLKVRDRGTPPR 494
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 56/116 (48%), Gaps = 16/116 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E P GT V T+ A DAD NS I + + G+ G F I+
Sbjct: 1778 HAPQFTAGQYEEHVSEAAPRGTTVATVTATDADQSHDNSNIHFGIVQGNEDGKFQIE--- 1834
Query: 62 PLNHFRIVPTKIDPGTKKKEY--NIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I+P +Y I++ + +DRE P+ Y L + A D+GTP R +
Sbjct: 1835 ----------TIEPSPNSDQYMGKIILFQAIDREEVPM-YTLRVLASDRGTPERNS 1879
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVFS Y +V E+ V T+ A+ +DP G I+YS+ GD GYF ID
Sbjct: 93 PVFSQARYSFSVPEDAARQHTVGTVMASHSDP-GKTDPITYSIHSGDRQGYFAID 146
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P+F+ Y A + E IG V+ + A DAD G N+ I Y + G+ F I+++
Sbjct: 1893 HSPIFNSTQYVAQISEEAVIGAFVVRVFAFDAD-SGPNADIHYEITSGNDDSLFAINSQS 1951
>gi|410914515|ref|XP_003970733.1| PREDICTED: protocadherin Fat 4-like [Takifugu rubripes]
Length = 5463
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS +Y ++EN GT VI + A DAD G N +I +S+ GG+ F ID+
Sbjct: 2618 NTPSFSQNIYDIEIEENTLTGTDVIQVFATDAD-EGTNGQIRFSIPGGNTNSDFRIDSVT 2676
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I V K LDRE A Y+L ++A D+G+ PR
Sbjct: 2677 GV--------------------ISVAKQLDRE-ARSSYSLVVQAADRGSSPR 2707
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ VY +V E+ P G+ ++T+ A+DAD G N+++ Y + GD +F I +G
Sbjct: 2408 NPPAFNTSVYSTSVSESLPAGSSIVTVGASDAD-DGPNAQLLYRIASGDPQSHFIITKDG 2466
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L K LDRE YNL + D PP + +T +
Sbjct: 2467 VLK---------------------TQKALDRESQSF-YNLVITVNDLAPPPMTRFTSTAQ 2504
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 48/109 (44%), Gaps = 21/109 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ +Y V E +G LV + A D+D S+ SYS+ F+I+
Sbjct: 3870 PVFTQELYDVQVSEGLSLGGLVTFVSAEDSDSVPSWSRFSYSIAPEHDQKIFSIN----- 3924
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K + V LDRE P+ YNLT+ AVD GTPP
Sbjct: 3925 ---------------AKTGQVSVAAPLDRETTPV-YNLTVLAVDTGTPP 3957
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF Y+ T+ E++P+ + ++A D D G N +I Y + GG+ F I +G
Sbjct: 1460 NSPVFDQLSYEVTILESEPVNSRFFKVEATDKD-SGFNGEIMYDITGGNTADVFGIFPDG 1518
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + ++D + + YN+V++ DR + PL ++ + +
Sbjct: 1519 QL----YIKAELDREIQDR-YNLVLVA-KDRAVEPLSASVNVSVL 1557
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 51/114 (44%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F V EN IG LV ++ A DAD G N+ I+YS+ + G F+
Sbjct: 1779 NAPSFPKPSVSVDVLENMRIGELVASVTATDAD-SGQNADITYSITATNNHGTFS----- 1832
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I ++K LD E + Y L + A D G PPR +
Sbjct: 1833 -----------ISPSTG----SIFLVKKLDYETQSV-YRLNVSAKDNGRPPRSS 1870
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 22/113 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+F + Y+ V E+ P G+ + + A D D G N+ + YS+ G+ LG+F+I L
Sbjct: 943 PIFQETEYRVDVSEDIPKGSYIKGVSATDGDS-GQNANLRYSLVSGNALGWFSISENSGL 1001
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ LLDRE L + A D+G PR +Y
Sbjct: 1002 --------------------VTSAGLLDRETTS-EIVLNISAKDQGLQPRVSY 1033
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 17/99 (17%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN IGT+V L +D+D N IS S+ GG+ +F + + P+ + +
Sbjct: 841 ASVDENAQIGTVVALLTVSDSDSSAANGNISVSILGGNEQRHFEV-HTSPVPNLSL---- 895
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I V +LDRE YNLT+ D G P
Sbjct: 896 -----------IKVASVLDRERIS-SYNLTVSVSDNGRP 922
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 14/113 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS VY + EN +GT++ T+ A D +N+ ISY + GD G F ++ G
Sbjct: 1258 NPPVFSQKVYSFVMFENVGVGTVIGTVSATTVD---LNTNISYLITSGDQRGLFGVNGAG 1314
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR--EIAPLGY-NLTLRAVDKGTP 111
+ +++D ++E + LK++ R EI + N+T++ ++ P
Sbjct: 1315 QIT----ASSQVD----REEQSFHQLKVVARAGEITGEAFVNVTVKDLNDNAP 1359
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 53/118 (44%), Gaps = 26/118 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ + T+ E+ P GT V+ + ++DAD G N IS S G G F+
Sbjct: 2828 NAPVFTASSFHTTITEDAPTGTDVLLVNSSDAD-VGNNGVISLS----GGHGQFS----- 2877
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
I+P T + I+ LLDRE Y L + A D G P + AT
Sbjct: 2878 -----------INPATGQ----IITSSLLDRE-ERANYQLLVVATDGGQPQGLSSSAT 2919
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 51/110 (46%), Gaps = 25/110 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ +V E+ +G+ V+ + A+D D G N++I Y + G
Sbjct: 723 NPPSFEQDQYQTSVFEDAAVGSSVLQVAASDGD-EGANAEIRYFLDEG------------ 769
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P +IDP T +V+ + LD E + Y+LT+ AVD G P
Sbjct: 770 -------TPFQIDPKTG----TVVIKEGLDYE-SKREYSLTIHAVDNGVP 807
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y A VKEN+P G+ V T+ A D D G N + Y + GD + + N G
Sbjct: 1154 NRPVFYPVQYFANVKENEPSGSYVTTVSATDPD-LGRNGTVKYMITAGDTVKFHINGNTG 1212
Query: 62 PL 63
+
Sbjct: 1213 KI 1214
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 23/98 (23%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
++EN P+ T+V + A+D+D G NS + YS+R GP ++ K
Sbjct: 2527 IQENTPVDTVVFAVHASDSD-SGPNSYVEYSLR-------------GPFSN------KFS 2566
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
GT + +V LDRE Y LT+ A DKG PP
Sbjct: 2567 IGTIDGDVRLV--GELDREELS-NYTLTVVATDKGEPP 2601
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
+ P FS ATV E+ +GT + TL A D D MN I+Y++ G+ G F+I++
Sbjct: 3553 HTPEFSQSQVSATVPESIAVGTAIRTLSARDKDRE-MNGVITYNITSGNDRGLFSINS 3609
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ +YQA+V E+ P T ++ + A+D D N + Y V G+ G F ID
Sbjct: 1674 NQPKFTKDIYQASVSESAPNVTQLLRVSASDVD-ENRNGLVHYRVAEGNEEGQFMID--- 1729
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G+ + + ++ LD E Y+L + AVD G P
Sbjct: 1730 --------------GSSGQ---VTLVGKLDYETTS-SYSLKIIAVDAGAEP 1762
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF + + T++EN G ++ L A DAD G N+ ++Y++ G F ID E
Sbjct: 2204 NPPVFPNDILDVTIEENVGDGFKIMQLTATDAD-EGPNALVTYTIISG-ADDSFRIDPES 2261
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP--PRETYK 117
++ TK ++ +Y+++V ++ + + N+T++ V+ +P R TY
Sbjct: 2262 G----DLIATKKLDRERRSKYSLLVRADDGKQSSDMRLNITVKDVNDHSPKFSRATYS 2315
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Query: 13 ATVKENQPIGTLVITLKAADAD-PPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPT 71
A V ENQ GT V TL A+DAD PP + + G YF++ G L R
Sbjct: 3983 AEVMENQRAGTAVTTLTASDADLPPNQGPFLFSLLSSGSAKSYFSLSQNGVLTTSR---- 4038
Query: 72 KIDPGTKKKEYNIVVLK 88
+ID Y VV+K
Sbjct: 4039 EIDREQISDFYLSVVIK 4055
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVF Y V+EN P GT V+ + A D D G N+ ++Y ++ D F ID
Sbjct: 3658 NPPVFEPDEYFPVVQENVPSGTTVVKMTATDGD-SGANAVMAYVIQSSDS-DLFVID 3712
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 48/117 (41%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMN--SKISYSVRGGDGLGYFTIDN 59
N+PVF D + KE+ G VI A D D G N +Y + G+ F +D
Sbjct: 608 NSPVFPDASIVVSFKEDASSGRQVILDTATDTD-IGSNGVDHTTYRIVKGNEQRRFRLD- 665
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P + Y
Sbjct: 666 -----------ITVNPSGEGAFLHLVSTGGLDREVTPF-YQLLIEVEDKGEPKKFGY 710
>gi|426229938|ref|XP_004009040.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2 [Ovis aries]
Length = 4343
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ FV+Q V+EN P GT V+ + A D D G++ ++ Y +R G L F+I+ +
Sbjct: 1023 LHPPHFASFVHQGQVQENSPSGTSVMVVAAHD-DDTGLDGELQYFLRAGTSLAAFSINQD 1081
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I L LDRE A Y LT+ AVD+G+ P
Sbjct: 1082 TGM--------------------IQTLAPLDREFASC-YWLTVLAVDRGSIP 1112
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 51/108 (47%), Gaps = 22/108 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F +Y V EN +G +V+T+ A D D P +NS I+YS+ GG+ LG+F I
Sbjct: 3317 PRFPQHLYSTRVLENAIVGDVVLTVSATDEDGP-VNSAITYSLIGGNQLGHFAI------ 3369
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K+ + V K LD E Y+L LRA D G P
Sbjct: 3370 --------------HPKKGELQVAKALDWEQTS-SYSLKLRATDSGQP 3402
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y+ +V EN G V TLK DAD N +++ + GD LG F I G
Sbjct: 2900 NAPRFASEDYRGSVVENSEPGEPVATLKTLDADISEQNRQVTCYITEGDPLGQFGISQVG 2959
Query: 62 PLNHFRIVPTK 72
+ +RI K
Sbjct: 2960 --DEWRIFSRK 2968
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 49/113 (43%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+APVF+ Y T EN P GT V+T+ A D D G N I+YS+ +
Sbjct: 450 HAPVFNRSSYDGTFDENIPPGTSVLTVSATDQD-HGENGYITYSIARPNA---------- 498
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
VP IDP I K +D E+ Y ++A D G+P R+
Sbjct: 499 -------VPFSIDPYLGI----ISTSKPMDYELMNRIYTFRVQASDWGSPFRQ 540
Score = 40.0 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P FS VY ++ E P T VI L A+D D G N +SY + G D +F I+
Sbjct: 2264 NPPTFSQLVYTTSISEGLPAQTPVIQLLASDRD-SGQNRDVSYQIVEDGSDVSKFFQING 2322
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ ++ LD E A +++ +RA+D+G PP
Sbjct: 2323 STG--------------------EMSTVQELDYE-AQQHFHVKVRAMDRGDPP 2354
Score = 39.7 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNE 60
N P F Y +V+EN PIG+ V+ L +D D P S+ + +G DG
Sbjct: 3420 NPPRFFQLNYSTSVQENAPIGSKVLQLILSDPDSPENGPPFSFRITKGNDGFA------- 3472
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
FR+ P +V L + + Y L + D GTPP
Sbjct: 3473 -----FRVTPDGW----------LVTTAGLSKRVQEW-YQLQIEVSDSGTPP 3508
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTID 58
N P+F Y+A + EN P+GT VI + A D D G + ++SY + G + F ID
Sbjct: 2791 NRPIFEADPYKAVLTENMPVGTSVIQVTANDQD-TGDDGQVSYRLPVDPGSNIHELFAID 2849
Query: 59 NE 60
+E
Sbjct: 2850 SE 2851
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 27/116 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQ T+ E+ +GT V+ LKA D D N ++ Y++
Sbjct: 812 NAPRFPPGGYQVTISEDTEVGTTVVELKAKDVDSED-NGRVRYALL-------------S 857
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
P F + P + IVV LDRE P Y L + A D+ PR+ ++
Sbjct: 858 PTEKFSLHPLTGE---------IVVTGHLDRESEP-QYILKVEARDQ---PRKGHQ 900
Score = 35.8 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P S V+ +V+E+ P+ T V+ L A D D K+++++ G+ +G+F +
Sbjct: 1129 NPPQMSRPVFYPSVREDAPLHTSVLQLDAWDPDSSS-KGKLTFNITSGNHMGFFVLH--- 1184
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLD 91
PL ++D + K+ +I+ + +LD
Sbjct: 1185 PLTGLLATARQLD--RENKDEHILEVTVLD 1212
Score = 35.4 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 22/113 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ Y+ V + G ++ ++A D D G N+++ YS G+ G+F I+
Sbjct: 1546 LHRPRFTQLHYETRVSDTTVPGAELLQVRAMDGDR-GANAEVRYSFLKGNSEGFFNINT- 1603
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
L + K+D + Y LT++A D+G+P R
Sbjct: 1604 --LLGIITLAQKLDQANHAR------------------YTLTVKAEDQGSPQR 1636
>gi|66773364|ref|NP_001019268.1| protocadherin 1 alpha 3 precursor [Danio rerio]
gi|50881586|gb|AAT85373.1| protocadherin cluster 1 alpha 3 [Danio rerio]
Length = 939
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 55/116 (47%), Gaps = 23/116 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
N P+FS +Y+ VKEN G +IT+ A+D D G N +I YS G D FTI++
Sbjct: 231 NKPIFSKSLYKVKVKENSQFGAKIITISASDLD-EGTNGQIQYSFLGNTDEQNLFTINSN 289
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ IVV +D E P L ++A DKG+PP+ T+
Sbjct: 290 SGV--------------------IVVQGQIDYEENP-AIQLRVQAKDKGSPPKSTH 324
>gi|328710951|ref|XP_003244410.1| PREDICTED: protocadherin-like wing polarity protein stan-like
isoform 2 [Acyrthosiphon pisum]
Length = 3165
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 54/111 (48%), Gaps = 23/111 (20%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG-LGYFTIDNEG 61
AP+F + Y A++ E+ P+G+ V+ + A D D G N+ I+YS+ G G FTI+ +
Sbjct: 823 APIFDNAPYTASIYEDAPVGSTVLVVSATDGD-VGQNALITYSLASGYGDASEFTINAQS 881
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
IV K LDRE+ GY LT+ A D G PP
Sbjct: 882 GA--------------------IVTTKALDREVQS-GYLLTVTARDGGNPP 911
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 60/113 (53%), Gaps = 17/113 (15%)
Query: 2 NAPVF--SDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
++PVF + +Y+A+V+E+ +GT +IT++A D D G+NS+I YS+ G G + +
Sbjct: 384 HSPVFESASGMYEASVRESVSVGTTIITIRATDLD-IGVNSQIEYSIESISGGGINSSAD 442
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
E G + + V + LDRE+ + Y + ++A D+ PP
Sbjct: 443 E-------------TFGIDLRSGVVSVRRNLDREVCEV-YTVMVKASDQAAPP 481
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 24/114 (21%)
Query: 2 NAPVFSDFVYQATVKE--NQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P FS+ Y A V E N ++ T+KA DAD G+N+ + Y++ GG+ G F+ID+
Sbjct: 501 NYPQFSERAYTANVAEDLNPNQRPVISTIKATDADQ-GLNAVVRYAIIGGNTQGQFSIDS 559
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ + ++K LD E A Y L +RA D G P R
Sbjct: 560 QNG--------------------EVSLVKSLDYE-AMRSYRLMIRAQDGGNPSR 592
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 39/114 (34%), Positives = 56/114 (49%), Gaps = 24/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F + Y +V E+ GT V+ + A+DAD G+N +I Y++ DG+ F ID
Sbjct: 928 NAPQFFNASYYGSVSEDALTGTSVLQVSASDAD-SGLNGRIKYAL--DDGVEAFVID--- 981
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
PT G + + LDRE P YN+ + A+DKG+P T
Sbjct: 982 --------PTS---GILRTAAS------LDRESIP-QYNIHVFAIDKGSPSLST 1017
Score = 42.7 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 16/112 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F ++Q +V EN +G ++ ++A DAD G N+ + Y + F D EG
Sbjct: 608 NPPRFYTSLFQESVLENVAVGYSIVRVQAYDAD-EGENAALKYRI--------FPRDFEG 658
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
L +P +D +K + LLDRE P Y + A D G PP+
Sbjct: 659 TLAEN--LPITVD----EKSGWVYTTHLLDRETNP-KYQFQVVAEDGGDPPK 703
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF + EN PIG+ V L A D D G N+ + YS+ GGD F++ L
Sbjct: 1033 PVFESDKLVMYIPENSPIGSTVGELYAKDPD-EGPNAIVQYSIIGGDDASSFSLLRRPGL 1091
Query: 64 NHFRIVPT-KIDPGTKKKEYNIVV 86
+ ++ + ++D + KK++ +VV
Sbjct: 1092 DKAELLTSVELDYESNKKKFELVV 1115
>gi|328710949|ref|XP_001947627.2| PREDICTED: protocadherin-like wing polarity protein stan-like
isoform 3 [Acyrthosiphon pisum]
Length = 3166
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 54/111 (48%), Gaps = 23/111 (20%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG-LGYFTIDNEG 61
AP+F + Y A++ E+ P+G+ V+ + A D D G N+ I+YS+ G G FTI+ +
Sbjct: 823 APIFDNAPYTASIYEDAPVGSTVLVVSATDGD-VGQNALITYSLASGYGDASEFTINAQS 881
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
IV K LDRE+ GY LT+ A D G PP
Sbjct: 882 GA--------------------IVTTKALDREVQS-GYLLTVTARDGGNPP 911
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 60/113 (53%), Gaps = 17/113 (15%)
Query: 2 NAPVF--SDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
++PVF + +Y+A+V+E+ +GT +IT++A D D G+NS+I YS+ G G + +
Sbjct: 384 HSPVFESASGMYEASVRESVSVGTTIITIRATDLD-IGVNSQIEYSIESISGGGINSSAD 442
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
E G + + V + LDRE+ + Y + ++A D+ PP
Sbjct: 443 E-------------TFGIDLRSGVVSVRRNLDREVCEV-YTVMVKASDQAAPP 481
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 24/114 (21%)
Query: 2 NAPVFSDFVYQATVKE--NQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P FS+ Y A V E N ++ T+KA DAD G+N+ + Y++ GG+ G F+ID+
Sbjct: 501 NYPQFSERAYTANVAEDLNPNQRPVISTIKATDADQ-GLNAVVRYAIIGGNTQGQFSIDS 559
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ + ++K LD E A Y L +RA D G P R
Sbjct: 560 QNG--------------------EVSLVKSLDYE-AMRSYRLMIRAQDGGNPSR 592
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 39/114 (34%), Positives = 56/114 (49%), Gaps = 24/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F + Y +V E+ GT V+ + A+DAD G+N +I Y++ DG+ F ID
Sbjct: 928 NAPQFFNASYYGSVSEDALTGTSVLQVSASDAD-SGLNGRIKYAL--DDGVEAFVID--- 981
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
PT G + + LDRE P YN+ + A+DKG+P T
Sbjct: 982 --------PTS---GILRTAAS------LDRESIP-QYNIHVFAIDKGSPSLST 1017
Score = 42.7 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 16/112 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F ++Q +V EN +G ++ ++A DAD G N+ + Y + F D EG
Sbjct: 608 NPPRFYTSLFQESVLENVAVGYSIVRVQAYDAD-EGENAALKYRI--------FPRDFEG 658
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
L +P +D +K + LLDRE P Y + A D G PP+
Sbjct: 659 TLAEN--LPITVD----EKSGWVYTTHLLDRETNP-KYQFQVVAEDGGDPPK 703
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF + EN PIG+ V L A D D G N+ + YS+ GGD F++ L
Sbjct: 1033 PVFESDKLVMYIPENSPIGSTVGELYAKDPD-EGPNAIVQYSIIGGDDASSFSLLRRPGL 1091
Query: 64 NHFRIVPT-KIDPGTKKKEYNIVV 86
+ ++ + ++D + KK++ +VV
Sbjct: 1092 DKAELLTSVELDYESNKKKFELVV 1115
>gi|410926011|ref|XP_003976472.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1-like
[Takifugu rubripes]
Length = 2876
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
N P F +YQ TV E+ P+ T V+ + A+D D G N ++SY+ +GG DG G F I+
Sbjct: 712 NTPQFLRDMYQGTVFEDAPVYTSVLQISASDRD-SGTNGRVSYTFQGGDDGEGDFLIETY 770
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I + LDRE P+ Y L AVD+G PP
Sbjct: 771 SGI--------------------IRTARKLDRENVPV-YTLKAFAVDRGVPP 801
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL-GYFTIDNE 60
++PVF Y+ +++EN +G V+T++A D D P N+ + Y + DG+ F ID+
Sbjct: 188 HSPVFEQIEYRVSIRENVEVGFEVMTIRATDGDAPS-NANMIYKIVNDDGVSSIFEIDSR 246
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVV 86
L R P + + +Y ++V
Sbjct: 247 NGLVRIRERPDR----ETRDQYQLIV 268
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS+ Y V EN + T ++ ++A D D G N+K+ YS+ G+ G F I +
Sbjct: 296 NYPQFSEKRYVVQVPENVAVNTKIVQVEATDKD-EGNNAKVHYSIISGNIKGQFYIHS-- 352
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PT + I V+ LD E+ YNL ++A D G PP
Sbjct: 353 --------PTGV----------IDVINPLDYEMI-REYNLRIKAQDGGRPP 384
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF V V+EN P+G++V + A D D G N++I Y + G+ F +D
Sbjct: 818 NAPVFEKDVLFIDVEENSPVGSVVARITATDPD-EGSNAQIMYQIVEGNIPEVFQLD--- 873
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
N T +D T +KEY IVV
Sbjct: 874 IFNGDLTALTDLDYET-RKEYVIVV 897
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F++ VY + E+ +GT V+T+ A D D +NS ++Y + G+ F I ++
Sbjct: 507 NVPAFTEKVYSLKINEDAIVGTSVLTVTAVDRD---VNSVVTYQISSGNTRNRFAITSQ 562
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 48/109 (44%), Gaps = 31/109 (28%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSV------RGGDGLGYFTIDNEGPLN 64
YQ +V EN+P GT VITLKA D D G ++ YS+ R D +F ID++
Sbjct: 89 YQVSVPENEPAGTRVITLKATDPD-DGEAGRLEYSMEALFDSRSND---FFNIDSQTG-- 142
Query: 65 HFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+I ++ LDREI + + D G+P R
Sbjct: 143 ------------------SITTIQPLDREIKDT-HVFKVTVTDHGSPKR 172
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF YQ T+ E +P+G V + A D D G N++I+Y + D + F ID
Sbjct: 611 PVFQSANYQVTLGEEKPVGHTVALISATDED-TGENARITYVME--DNVPQFKID 662
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
P+F +QATV EN PIG VI ++A D D G N+++ Y +
Sbjct: 404 PMFVSTPFQATVLENVPIGYSVIHIQAIDGD-SGENARLEYRL 445
>gi|190336730|gb|AAI62531.1| Pcdh1a3 protein [Danio rerio]
gi|190338818|gb|AAI62534.1| Pcdh1a3 protein [Danio rerio]
Length = 939
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 55/116 (47%), Gaps = 23/116 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
N P+FS +Y+ VKEN G +IT+ A+D D G N +I YS G D FTI++
Sbjct: 231 NKPIFSKSLYKVKVKENSQFGAKIITISASDLD-EGTNGQIQYSFLGNTDEQNLFTINSN 289
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ IVV +D E P L ++A DKG+PP+ T+
Sbjct: 290 SGV--------------------IVVQGQIDYEENP-AIQLRVQAKDKGSPPKSTH 324
>gi|449278207|gb|EMC86141.1| Protocadherin Fat 4, partial [Columba livia]
Length = 4990
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 6/113 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF VY+ + E P+G+ V L A D D G+N+ + YS+ G+ LG+F I L
Sbjct: 454 PVFGQSVYRVNISEEVPLGSYVRGLSATDRD-SGLNANLKYSIVSGNELGWFRISEHSGL 512
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ + G+ V LDRE A L + A D+G P+ +Y
Sbjct: 513 ----VTTAGPEGGSAGHAAGTSVSSGLDRETAS-QVVLNISARDQGVQPKFSY 560
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y+ V EN GT +I + A D D G N ++ Y++ GD F ID+
Sbjct: 2156 NNPLFAQKLYKVEVGENTLTGTDLIQVFATDGD-EGTNGQVRYAIVSGDADNEFRIDSVT 2214
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I V K LDRE P Y LT+++ D+G+ PR
Sbjct: 2215 GV--------------------ITVAKPLDREKKP-SYTLTVQSADRGSSPR 2245
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y ++ EN G+ ++ DAD G NS++S+S+ GD G F IDN G
Sbjct: 1946 NPPVFSMTSYSTSLMENLSPGSAILNFSVTDADD-GSNSQLSFSIASGDSGGQFGIDNSG 2004
Query: 62 PLN 64
L+
Sbjct: 2005 VLS 2007
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 14/110 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS +YQA V E+ P+G V+ + AADAD G N+ I Y + GGDG G
Sbjct: 204 NPPIFSQTLYQARVPEDAPVGASVLQVAAADAD-EGTNADIRYRLEGGDGGGGGEGAGS- 261
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+P ++DP + I + + LD E+ Y+LT++A+D+G P
Sbjct: 262 -------LPFEVDPESGV----IRIRECLDYEMRQ-QYSLTVQAMDRGVP 299
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ +Y ATV E+ P GT ++ + ++DAD N+ ISY + GGD FT
Sbjct: 2366 NVPTFAFNMYSATVPEDAPTGTDILLVNSSDAD-ASTNAVISYKLTGGD--SQFT----- 2417
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I+ LLDRE + Y L + A D G P
Sbjct: 2418 -----------INPSTGQ----IITSALLDRE-SRENYTLVVVASDGGFP 2451
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 48/104 (46%), Gaps = 24/104 (23%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN GT+V L +DAD P N IS S+ G+ +F + H VP
Sbjct: 333 ASVDENAAPGTVVALLTVSDADSPAANGNISVSILAGNEQRHFEV-------HSSKVP-- 383
Query: 73 IDPGTKKKEYNIVVLKL---LDREIAPLGYNLTLRAVDK-GTPP 112
N+ ++K+ LDRE P YNLT+ D G PP
Sbjct: 384 ----------NLSLIKVAAALDRERIP-AYNLTVAVADNYGAPP 416
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F V EN +G LV ++ A D+D G N+ + YS+ G + G F+
Sbjct: 1317 NSPSFPKTTLLVDVLENMRVGELVSSVTATDSD-SGDNADLHYSITGTNNHGTFS----- 1370
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1371 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1408
Score = 43.1 bits (100), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 56/105 (53%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y+ T+ E++P+ + ++A+D D G+N +I+YS+ G+ F I +G
Sbjct: 998 NPPVFDQLSYEITILESEPVNSRFFKVQASDKD-SGVNGEIAYSIIEGNTGDAFGIFPDG 1056
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D + +E I+++ DR + PL + + +
Sbjct: 1057 QL----YIKSELD--RELQERYILLVVASDRAVEPLNATVNVTVI 1095
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ Y + E P GT V + A D+D S+ SY + G+ F+
Sbjct: 3410 PVFTLGTYNIRISEGVPPGTHVTFVSAFDSDSVPSWSRFSYFIGSGNNNSAFS------- 3462
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + + V LDRE P+ YNL++ A+D GTP
Sbjct: 3463 ---------INPQTGQ----VTVTAELDRETLPV-YNLSVLAIDSGTP 3496
Score = 41.6 bits (96), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 46/108 (42%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF Y A ++EN+P GT V T+ A D D G N + YS+ GD + G
Sbjct: 691 NSPVFYPVQYFAHIQENEPAGTYVTTVSATDPD-LGPNGTVKYSISAGDTSRFQVHGQTG 749
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
++ TKI LDRE Y L + A D G
Sbjct: 750 ------VITTKI---------------ALDRE-EKTAYQLQIMATDGG 775
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 50/117 (42%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMN--SKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G +I A DAD G N SY + G+ G F ++
Sbjct: 89 NAPVFPDPSIVVTFKEDTGSGRQLILDTATDAD-SGTNGVDHSSYRIVAGNEEGCFRLN- 146
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE P Y L ++ DKG P R Y
Sbjct: 147 -----------ITLNPSGEGAFLHLVSRGGLDREATPT-YQLLVQVEDKGEPRRRGY 191
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 47/108 (43%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F +YQATV E T V+ + A+D D G+N I YSV G+ F ID+
Sbjct: 1212 NAPKFLKDLYQATVSELAANLTQVLRVSASDVD-EGINGLIHYSVIKGNEEKRFAIDS-- 1268
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ ++ LD E A Y L ++AVD G
Sbjct: 1269 ------------------STGQVTLVGKLDHE-ATASYLLVIQAVDSG 1297
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+P F+ Y V EN P GT VI L A DAD G N+ I+Y+++ D F ID
Sbjct: 3198 NSPAFNPEDYFPNVLENAPSGTTVIRLNATDAD-SGPNAVIAYAIQSSDS-DLFVID 3252
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 45/108 (41%), Gaps = 22/108 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y V EN VI A D G+NSK++Y + GG+ G FT+ G L
Sbjct: 2263 PTFELSPYSVNVPENLETLPKVILQVVARDDDQGLNSKLTYVLVGGNEEGAFTLSASGEL 2322
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
R+V + LDRE+ Y L + A D G+P
Sbjct: 2323 ---RLVQS------------------LDREMKE-QYILLITAADSGSP 2348
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 13/113 (11%)
Query: 2 NAPVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDN 59
N P FS YQ ++ EN P GT ++ L A D D G N + +S++ + L +
Sbjct: 573 NKPRFSQPEGYQVSLAENSPSGTELLVLSATDGD-LGDNGTVRFSLQEAEPALAVVGPSS 631
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P FR +DP + K + + LDRE ++L + A D G+PP
Sbjct: 632 VTPRRVFR-----LDPVSGK----LSTISQLDRE-EQAHFSLQVLATDLGSPP 674
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
+ P FS T+ E+ +GT++ T+ A D D MN I Y++ G+ G F I+
Sbjct: 3093 HTPEFSQSHMSVTIPESHSVGTVIRTVSAQDRD-AAMNGLIRYNISSGNEAGIFAIN 3148
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVFS +Y V EN +G V T+ A+ D +N+ ISY + GD G F I+
Sbjct: 795 NPPVFSQGMYSFVVFENVALGYHVGTVFASTMD---LNTNISYLITTGDQRGMFAIN 848
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 21/98 (21%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKI 73
++ EN P+G+ VI++ A D D +N +++Y++ I NHFRI +
Sbjct: 1434 SIVENVPVGSSVISVTAHDPD-ADINGQLTYAI----------IQQMPRGNHFRIDEVR- 1481
Query: 74 DPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
GT I +DRE A L + LT++A D+ P
Sbjct: 1482 --GT------IFTNAEIDREFANL-FELTVKATDQAVP 1510
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD-PPGMNSKISYSVRGGDGLGYFTIDNE 60
N P S Q V EN GTLV+TL+++D D PP Y + G YF++
Sbjct: 3514 NGPTLS--TRQGEVMENNRAGTLVMTLQSSDPDLPPNQGPFTYYLLSTGPATSYFSLSTT 3571
Query: 61 GPLNHFR 67
G L R
Sbjct: 3572 GVLTTTR 3578
>gi|194758587|ref|XP_001961543.1| GF15021 [Drosophila ananassae]
gi|190615240|gb|EDV30764.1| GF15021 [Drosophila ananassae]
Length = 5182
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 56/113 (49%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQ--PIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P F D Y A V EN P G V+T+KA DAD P +NS++ Y ++
Sbjct: 2385 NRPTFLDSPYLARVMENTVPPNGGYVLTVKAYDADSPPLNSQVRYFLK------------ 2432
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
EG + FRI + D I +LK LDRE Y LTL A+D G+PP
Sbjct: 2433 EGDTDLFRINASSGD---------ISLLKPLDRERQS-EYILTLVAMDTGSPP 2475
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++ P FS YQ V EN+P+G+ ++T+ A DAD G N + Y++ GG+ L F++D
Sbjct: 3228 LHTPKFSANTYQVIVPENEPVGSTILTVGATDAD-VGPNGMLRYAISGGNELRKFSVD 3284
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 22/104 (21%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
ATV EN GT+V + D+D G+N + + G+ +G+F ++ G L+ R
Sbjct: 402 ATVDENAANGTVVAAVSVIDSDD-GLNGNTTTRIVSGNEMGHFRLEKTGSLHIVR----- 455
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVDKGTPPRET 115
V +LDRE +G YNLT+ A+DKGTP R T
Sbjct: 456 -------------VNGVLDRE--EIGKYNLTVVAMDKGTPARTT 484
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F Y + V EN PIG V ++ A D D G N ++YS+ GD F ID+ G
Sbjct: 2024 NAPIFDPMSYSSEVFENAPIGKEVASVSAKDID-SGNNGLVAYSITAGDSDSEFEIDSNG 2082
Query: 62 PLNHFR 67
+ R
Sbjct: 2083 TIRTRR 2088
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 50/118 (42%), Gaps = 22/118 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y + V E IGT VIT+KA D D N++ SYS+ G+ F ID
Sbjct: 3547 PEFIKRQYSSAVSEAAAIGTKVITVKAVDKDIRPQNNQFSYSIINGNLKQSFRID----- 3601
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ I LDRE +NL + A+D G PP +T AT R
Sbjct: 3602 ---------------AQSGEITTAAHLDRE-ETAHFNLVIGAIDMGLPP-QTGSATVR 3642
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 35/145 (24%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N+P+F Y A+V EN IG +V+ + A D D G N +I +S+ GD FTI +
Sbjct: 2279 NSPIFDPKQYSASVAENASIGAMVLQVSATDID-EGANGRIRFSIVMGDLNHDFTISEDT 2337
Query: 61 ------GPLNHFRIVPTKI----------DPGTKKKEYNIVVLKLLDREIAPL------- 97
LN R+ + +P + E I++L + D L
Sbjct: 2338 GVVRVAKNLNFERLSRYTLTVKAEDCDLENPASDTAELTIIILDINDNRPTFLDSPYLAR 2397
Query: 98 ----------GYNLTLRAVDKGTPP 112
GY LT++A D +PP
Sbjct: 2398 VMENTVPPNGGYVLTVKAYDADSPP 2422
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 24/111 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
NAP F+ + +V E P GT ++ +A+DAD G+NS++ +S+ G+ F ID N
Sbjct: 1385 NAPEFTQSSSEVSVLETSPTGTELMRFRASDAD-QGVNSQVVFSISAGNRRDTFHIDTNT 1443
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
G L + K+LD E Y L + A D GTP
Sbjct: 1444 GSL---------------------YLHKMLDYEDI-TSYALNITASDCGTP 1472
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 54/115 (46%), Gaps = 24/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y A V+EN P GTLV+ A D D G+N+++ +++ GD + F ID++
Sbjct: 2492 NGPVFELQSYHAVVEENLPAGTLVLHPTATDKD-EGLNARLRFNLL-GDHIMRFHIDSQT 2549
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG-TPPRET 115
+ I LDRE + Y+LTL A D T PR +
Sbjct: 2550 GI--------------------ITTSMPLDREETAV-YHLTLMAQDSSVTEPRAS 2583
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
NAPVF Y T+ E GT + + DAD G+N + YS+ GG+ G F++D
Sbjct: 1279 NAPVFLRAPYHVTISEGASEGTHITHVFTQDAD-EGLNGDVYYSLAGGNEAGQFSLDGAT 1337
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLK 88
G L R ++D +++ + +VV +
Sbjct: 1338 GQLTLAR----RLDRESQEAHHLVVVAR 1361
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ + EN+P GT ++TL A+D D P SY + GG + ++D
Sbjct: 3651 NAPTFTREGLMGYISENEPSGTSIMTLAASDPDLPRNGGPFSYKLVGGKHKSWLSVDRSS 3710
Query: 62 PL 63
L
Sbjct: 3711 GL 3712
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF Y A + E G+ V ++ A D D G+N+++ Y + G+ L +F++D
Sbjct: 498 HEPVFEKSEYSAVLSELASKGSYVTSITATDGD-TGVNAEVHYEILSGNELKWFSMD--- 553
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
PL IV LDRE++ L++ A D G P+ Y
Sbjct: 554 PLTGL-----------------IVTAGPLDREVSD-SVELSISARDGGPNPKFAY 590
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 14/111 (12%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF + V+EN I T+V+ +KA D D G N I Y++ G +I+ +G
Sbjct: 2168 PVFVS-ANETAVRENVAINTVVLAIKAVDND-EGRNGYIDYTLNGA------SIE-DGSA 2218
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+ +P ++P + + V LDRE+ Y L + A D+G PP+E
Sbjct: 2219 SQSEPLPFSLNP----TDGLLRVTDALDRELRA-SYLLNITARDRGEPPQE 2264
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 45/114 (39%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF Y+ ++ E + T L A D D N +ISY + G+G F I +G
Sbjct: 1046 HTPVFDHTSYETSLLEGTRVNTRFFALPATDMD-TAENGRISYEIIEGNGERIFGIFPDG 1104
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
L V LLDRE+ Y LT+ D G P R +
Sbjct: 1105 YL---------------------FVKALLDREVRDY-YALTVSCRDAGEPSRSS 1136
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
N PVF+ Y + EN+PIGT V A D D P N+ I YS
Sbjct: 3334 NPPVFAQKEYHGYLAENKPIGTFVFQAVATDKDSP-RNAIIHYS 3376
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 48/111 (43%), Gaps = 25/111 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPV +Y + V E + L+ +KA D D G N K+SY ++ D G F I +
Sbjct: 2809 NAPVMERLIYNSEVLEEESPPQLIAVVKATDRD-SGDNGKVSYRLK-DDYRGTFEIAS-- 2864
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVDKGTP 111
D G I LDRE LG Y L + AVD+G P
Sbjct: 2865 ------------DTG------EIHTTMRLDRE--ELGEYALVVEAVDQGRP 2895
>gi|321479216|gb|EFX90172.1| hypothetical protein DAPPUDRAFT_6 [Daphnia pulex]
Length = 3261
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 21/114 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS VY A + E+ GT+V+ + AAD+D N I YS+ G+ F I +
Sbjct: 2423 NAPKFSQDVYTAHISEDATRGTIVLHVSAADSDETRDNHNIDYSIENGNINSTFQITS-- 2480
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
D G I+++K +DRE + +NL + A+D+G+P R +
Sbjct: 2481 ------------DTG------EILLVKTVDREEISV-FNLKVLAMDRGSPARNS 2515
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVF+ +Y+ V E Q IGT ++ + A D D N+++SY + G+ G F +D
Sbjct: 2529 NPPVFNQTLYEVKVSEAQAIGTALLRVAATDRD-HDENARLSYDITSGNDKGCFEVD 2584
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P F Y V EN P GT+V T A D D G K+ YS+ GG+G +F ID
Sbjct: 2635 NGPAFPVGSYLEFVAENAPAGTVVFTAHANDMD-RGPYGKLKYSIAGGEGKDHFNID 2690
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID--- 58
N P F +Y+A V EN P GT V+ + A D D G N ++Y++ G G F++D
Sbjct: 1579 NPPRFVRPLYEAAVAENSPAGTFVVKVSATDKD-VGTNGNLTYAIPEGIADGMFSVDPTT 1637
Query: 59 ----NEGPLNHFR----IVPTKIDPGTKKKEYN 83
GPL+ R IV + G+ +Y+
Sbjct: 1638 GAVTTTGPLDRERKSSYIVTIYVRDGSFPAQYD 1670
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 50/110 (45%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y + V E GT V+ + A D D G N+ I Y + G+ F I E
Sbjct: 2112 NAPRFTQDSYTSAVWEGNNKGTFVMQVSATDGD-MGANANIIYHIVDGNHDNAFVI--EP 2168
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P + IV T I +LDREI Y LT+ A D+G+P
Sbjct: 2169 PFSG--IVKTNI---------------VLDREIRDF-YRLTIIATDEGSP 2200
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P+F+ Y A+V EN IGT V+ + A D D G N +I+YS+ R D F ID
Sbjct: 206 NQPIFNQSRYFASVAENATIGTSVLQVFATDTD-AGDNGRITYSINRRQSDRDSVFVID- 263
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVV 86
PL V +D TK+ +VV
Sbjct: 264 --PLTGVISVNRPLDFETKEVHELVVV 288
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
P F+ Y AT+ EN T+V+T++A DAD G N+KI+YS+ + F IDNE
Sbjct: 1790 PRFTQNRYTATLAENVQPDTIVMTVQATDAD-RGHNAKITYSL-SNETQWLFKIDNE 1844
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 25/107 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG---DGLGYFTIDNEGPLNHFRIVP 70
+V+E P GT V+ ++A D D G N+ I+YS G DGL FTID +
Sbjct: 1165 SVREELPAGTEVVRIRAVDTD-EGNNASITYSFVIGDDTDGLEAFTIDESTG-----TIR 1218
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
TK+ +++ + Y L + D G PP+ET +
Sbjct: 1219 TKVTLDHEERAF----------------YRLAVSVKDHGRPPKETVR 1249
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYF 55
N P+F Y +V+E++ +G V+ + A D D G+N+ ++Y++ GDG G +
Sbjct: 530 NEPIFDQSFYNVSVREDEAVGHCVLKVSATDPD-CGVNAIVNYTM--GDGFGKY 580
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 27/117 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
+AP F + Y V EN + +++ T+ A DAD G+N +I+YS+ GG+ F+ID +
Sbjct: 1684 HAPQFGESCYPLRVPENSDL-SVIHTVVATDADS-GVNGEITYSITGGNVGNKFSIDLHT 1741
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP-PRETY 116
G L+ + LDRE+ Y L + A D+G P PR+ +
Sbjct: 1742 GQLSS----------------------RPLDRELKDR-YYLIIAAQDRGVPSPRQGF 1775
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 25/112 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
NAP F V + +V EN +G+ + A D D G N + Y + DGL F ID
Sbjct: 840 NAPEFDTVVVKISVAENAELGSPIYAAHAHD-DDSGDNGAVIYQLLTNPDGL--FKID-- 894
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P F ++ K+D T +K Y L + A DKG+PP
Sbjct: 895 -PRQGFIMLTRKLDFETTQK------------------YALVIGAQDKGSPP 927
>gi|195342415|ref|XP_002037796.1| GM18102 [Drosophila sechellia]
gi|194132646|gb|EDW54214.1| GM18102 [Drosophila sechellia]
Length = 3033
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 55/113 (48%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQ--PIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P F D Y A V EN P G V+T+ A DAD P +NS++ Y ++ GD
Sbjct: 2377 NRPTFLDSPYLARVMENTVPPNGGYVLTVNAYDADTPPLNSQVRYFLKEGDS-------- 2428
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ FRI + D I +LK LDRE Y LTL A+D G+PP
Sbjct: 2429 ----DLFRINASSGD---------IALLKPLDREQQS-EYTLTLVAMDTGSPP 2467
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV+EN P GT V+T +A D D G+N+K+ +++ G+ + F ID+E
Sbjct: 2484 NDPVFELQSYHATVRENLPAGTHVLTPRATDKD-EGLNAKLRFNLL-GEHMHRFHIDSES 2541
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG-TPPR 113
I LDRE P+ Y+ TL A D T PR
Sbjct: 2542 G--------------------EISTATTLDREETPV-YHFTLMAQDSSITEPR 2573
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F Y + V EN PI T V+T+ A D D G N I YS+ GD F ID+ G
Sbjct: 2020 NAPIFDPMSYSSEVFENVPIATEVVTVSAKDID-SGNNGLIEYSITAGDVDSEFGIDSNG 2078
Query: 62 PLNHFR 67
+ R
Sbjct: 2079 TIRTRR 2084
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 22/104 (21%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
ATV EN GT+V + D+D G+N + S + G+ LG+F ++ L+ R
Sbjct: 394 ATVDENAVNGTVVAAVAVKDSDS-GLNGRTSVRIVSGNELGHFRLEEAADLHIVR----- 447
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVDKGTPPRET 115
V +LDRE +G YNLT+ A+D+GTP R T
Sbjct: 448 -------------VNGVLDRE--EIGKYNLTVVAMDQGTPARTT 476
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 58/145 (40%), Gaps = 35/145 (24%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N+PVF Y A+V EN IG +V+ + A D D G N +I YS+ GD F+I +
Sbjct: 2271 NSPVFDPKQYSASVAENASIGAMVLQVSATDVD-DGANGRIRYSIVLGDQNHDFSISEDT 2329
Query: 61 ------GPLNHFRIVPTKI----------DPGTKKKEYNIVVLKLLDREIAPL------- 97
LN+ R+ + +P E I +L + D L
Sbjct: 2330 GVVRVAKNLNYERLSRYSLTVRAEDCALENPAGDTAELTINILDINDNRPTFLDSPYLAR 2389
Query: 98 ----------GYNLTLRAVDKGTPP 112
GY LT+ A D TPP
Sbjct: 2390 VMENTVPPNGGYVLTVNAYDADTPP 2414
Score = 42.7 bits (99), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF Y A + E P G+ V ++ A D D G+N+++ Y + G+ L +F++D
Sbjct: 490 HEPVFEKSEYSAVLSELAPTGSFVASITATDED-TGVNAQVHYDILSGNELKWFSMD--- 545
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
PL IV LDREI L++ A D G P+ Y
Sbjct: 546 PLTGL-----------------IVTTGPLDREIRDT-VELSISARDGGPNPKFAY 582
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAP F+ + +V E P GT ++ +A+DAD G+NS++ +S+ G+ F ID+
Sbjct: 1377 NAPEFTQSSSEVSVLETSPTGTELMRFRASDAD-QGVNSQVVFSISAGNRRDTFHIDS 1433
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
NAP F Y T+ E GT + + DAD G+N + YS+ G+ G F +D+
Sbjct: 1271 NAPEFLRAPYHVTISEGASEGTHITHVFTQDAD-EGLNGDVYYSLAKGNEAGQFNLDSAT 1329
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLK 88
G L+ R ++D +++ + IVV K
Sbjct: 1330 GQLSLAR----RLDRESQEIHHLIVVAK 1353
>gi|321476878|gb|EFX87838.1| hypothetical protein DAPPUDRAFT_311854 [Daphnia pulex]
Length = 3133
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 41/112 (36%), Positives = 53/112 (47%), Gaps = 25/112 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F Y ATV E+ PIGT V+ + A+D D G N++I+Y + G
Sbjct: 828 HAPAFEAAPYSATVFEDAPIGTTVLIVAASDGD-VGDNARITYGLSG------------- 873
Query: 62 PLNHFRIVPT-KIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+VP I P T I+ K LDRE GY LT+ A D G PP
Sbjct: 874 -----ELVPEFSIQPATGA----IITTKQLDRERTS-GYLLTITARDNGNPP 915
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF +Y A V E+ IGT V+ + A DAD G N ++ Y + D N+
Sbjct: 932 NLPVFQQTMYTANVPEDALIGTSVLQVTATDAD-QGFNGRVRYVLLDAD-------TNDS 983
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P +D + N KLLDRE+ Y+L ++A+D+GTP
Sbjct: 984 PFT--------LDATSGILRTN----KLLDRELVA-KYDLLVQAIDRGTP 1020
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 24/118 (20%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP F Y+ ++KE+ IGT V+T++A D D G N+ + YS+ ++ G
Sbjct: 408 APTFEQPSYETSIKESASIGTAVLTVRAKDQD-AGANADVHYSI----------VNPFGA 456
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKL-LDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
FRI + ++ +L LDRE YNLT++AVD+G P +E AT
Sbjct: 457 NEAFRI----------DAKTGVISTRLALDRETNG-QYNLTIQAVDQG-PVQERQSAT 502
Score = 42.4 bits (98), Expect = 0.067, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N PVF VY A V E+ GT V+T+ AAD D N ++ YS+ GG+ G F++ ++
Sbjct: 725 NDPVFWPKVYDAIVGEDATPGTPVLTVTAADRDE---NPRLQYSLVGGNVRGRFSVSSQ 780
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 51/117 (43%), Gaps = 30/117 (25%)
Query: 2 NAPVFSDFVYQATVKEN-----QPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT 56
N P FS+ Y V EN PI V ++A DAD G N+ + YS+ GG+ G+F
Sbjct: 515 NYPQFSERTYTVDVAENVNWAENPI---VARIRATDADV-GPNAVLRYSLIGGNTQGHFV 570
Query: 57 IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
ID+ ++ V++ LD E Y L +RA D G P R
Sbjct: 571 IDSLSG--------------------DVAVVQPLDFETVR-SYRLVIRAQDGGNPSR 606
>gi|440909070|gb|ELR59020.1| Protocadherin Fat 3, partial [Bos grunniens mutus]
Length = 3373
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 1698 NAPVFAHEVYRGNVKESDPPGEVVAVLSTWDRDTSDINRQVSYHITGGNPRGRFAL---- 1753
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 1754 --------------GLVQSEWKVYVKRHLDREEQDI-YFLNITATD 1784
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 51/110 (46%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS VY A + E+ +G VI L A DAD N +I +S+ GD DNE
Sbjct: 2115 NPPEFSQDVYSAVISEDALVGDSVILLIAEDADSQP-NGQIRFSIVNGDR------DNE- 2166
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
F + P KKK LDRE GY+L ++AVD G P
Sbjct: 2167 ----FAVDPVLGLVKVKKK---------LDRERVS-GYSLLVQAVDSGMP 2202
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI ++A D D PGM +ISY++ F ID G
Sbjct: 1271 SPAFSQSTYVAEVRENAAAGTKVIHVRATDGD-PGMYGQISYAIINDFAKDRFLIDGNGQ 1329
Query: 63 L 63
+
Sbjct: 1330 V 1330
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ A ++EN+P+GT V+ L D D S+S+ G+ F +D++G
Sbjct: 2220 NSPVFTPANATAVIQENKPVGTSVLQLMVTDKDSFHNGPPFSFSILSGNEEEAFVLDSDG 2279
Query: 62 PL 63
L
Sbjct: 2280 IL 2281
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D++
Sbjct: 1168 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYSILSGNDRTSFLMDSKS 1226
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 16/104 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN-- 59
N PVFS Y A V EN L+ ++A D D G+N K+ YS+ G+F++D+
Sbjct: 1905 NPPVFSSDHYNACVYENTATKALLTRVQAVDPD-VGVNRKVVYSL-ADSANGFFSVDSSS 1962
Query: 60 -----EGPLNH-------FRIVPTKIDPGTKKKEYNIVVLKLLD 91
E PL+ R+ T PG + + +LD
Sbjct: 1963 GIIVLERPLDREQQSSYTLRVQATDQSPGQALSSLATISITVLD 2006
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 25/120 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVF Y A V+ + GTL+ + A D D G N +++Y ++ D G+F I+ N
Sbjct: 858 NSPVFVGLPYYAAVQVDAEPGTLIYRVTAIDKD-KGANGEVTYVLQ--DDYGHFEINPNS 914
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
G N+++ + + +++ + Y +T+ A D G P T P
Sbjct: 915 G---------------------NVILKEAFNSDLSNIEYGVTILARDGGKPSLSTSVELP 953
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 60/119 (50%), Gaps = 9/119 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F++ +Y+A+V E+ +G+ V+ + A D D G N+++ Y++ G+ F I+
Sbjct: 340 HSPYFTNPLYEASVFESAALGSAVLQVTALDKD-KGENAELMYTIEAGNTGNTFKIE--- 395
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLR---AVDKGTPPRETYK 117
P+ I+ +P ++ +K+ D+ P+ +R + + PR T+K
Sbjct: 396 PV--LGIITVSKEPDMTTMGQFVLSVKVTDQGSPPMSATAIVRISVTMSDNSNPRFTHK 452
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG----LGYFTI 57
N PVF Y+ + E P+GT + ++A D D G N +++YS+ + F+I
Sbjct: 1588 NKPVFETSNYETIIMEGMPVGTKLTQVRAMDVD-WGANGQVTYSLHSDSQPEKVMEAFSI 1646
Query: 58 D-NEGPLNHFRIVPTKIDP 75
D N G ++ + + + DP
Sbjct: 1647 DSNTGWISTLKDLDHETDP 1665
>gi|260785516|ref|XP_002587807.1| hypothetical protein BRAFLDRAFT_92256 [Branchiostoma floridae]
gi|229272960|gb|EEN43818.1| hypothetical protein BRAFLDRAFT_92256 [Branchiostoma floridae]
Length = 4039
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 22/114 (19%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP FS YQ T++E++P+ + V T+ A D D G+N +I YS+ GGD F
Sbjct: 3051 APAFSAPSYQVTIEESRPMNSHVFTVVATDRD-SGVNGEIRYSIVGGDDYRQF------- 3102
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
IDP T + V +LD E P Y+L + A D+G RE +
Sbjct: 3103 ---------YIDPRTGS----VTVAAVLDYETTPT-YHLNISARDRGLLYRENF 3142
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P+F Y ++ EN P GT V+ + A DAD G N+ I Y + GGDG F ID
Sbjct: 3155 NDPMFDPATYDPSIPENSPSGTSVVMVTATDAD-TGANAAIRYQITGGDGQDLFIID 3210
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N PVF Y A+++ENQP GT V+ + A+D D G+N +++Y + G+ G FTI
Sbjct: 695 NNPVFYPVRYYASIRENQPSGTSVVQVSASDLD-AGLNGRVTYQITRGNPDGKFTI 749
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 53/114 (46%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS + A V E+ + L+ TL A D D G N +I+YS+ G+ G FT+D+
Sbjct: 1322 NEPVFSPTLQTADVLESTRVNDLITTLTATDGD-AGSNGEITYSISEGNAHGTFTLDSY- 1379
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
T K + + K LD E + Y L + A D GTPP T
Sbjct: 1380 ---------------TGK----LYLAKALDYESTNV-YRLNITASDHGTPPLST 1413
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y +V E+ +GT ++ + AAD D G N + YS+ G+ DN+
Sbjct: 2100 NNPVFGPVSYDVSVLEDVAVGTELVQVVAADVD-EGTNGVVRYSIVSGN------TDNDL 2152
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N T + I V +L+D E GYNL +RA D+GT P E
Sbjct: 2153 AINAV----------TGR----ISVARLIDHE-RTTGYNLVVRARDQGTSPLE 2190
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y +V EN+ T V+T+ A+DAD G N + Y +R L
Sbjct: 2621 NPPIFSQDPYVGSVGENEGTLTSVLTVSASDAD-SGSNGEFEYRLRAAGNLD-------- 2671
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
N F++ P T+ + LDRE Y+L + AVDKG+P
Sbjct: 2672 --NSFQVNPNTGQVSTR---------RFLDREQRD-SYSLVVEAVDKGSP 2709
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 23/116 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL--GYFTIDN 59
+APVF + Y + V EN IG ++I + A D G N+++ YS+ GG+G F+ID
Sbjct: 2942 HAPVFQEVSYFSPVPENAQIGEMIIQVLAVDNQDIGSNAEVEYSITGGNGTNPNLFSID- 3000
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ + V L R+ + Y++T++A D+G+P T
Sbjct: 3001 ------------------RTTGWVSVSASLSGRQ--NIWYSVTVQARDQGSPALST 3036
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+APVFS Y + E+QP+ ++ A D D G+N ISYS+ GG+
Sbjct: 1003 HAPVFSSSSYSTAIPESQPVNDQFFSVTATDED-AGLNGLISYSITGGN----------- 1050
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P + F + P + N+ V LDRE+ Y L + A D G +
Sbjct: 1051 PGDRFGVFP----------DGNLYVRNALDREVQSR-YVLIVEAQDNGVEAK 1091
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 19/112 (16%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P FS+ Y TV ENQ VIT+ A D D +G +G Y+ D E
Sbjct: 589 PTFSESPYNVTVLENQSAPREVITVTAQDDD------------QGSNGEVYYEFDTE-TA 635
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
N + ++D T + I L DRE L Y+L +RA D+G PP+++
Sbjct: 636 NRYS-GSFRLDSNTGR----IDTLVTFDRETTDL-YSLVVRASDRGNPPQQS 681
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 24/107 (22%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NEGP 62
PVF Y T+ E PIG+ V + A D D G+N+++ Y++ G+ G+F ID N G
Sbjct: 483 PVFERTRYNTTLSERVPIGSYVQGVTATD-DDSGLNAQVRYAIVSGNEYGWFMIDGNTG- 540
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+V T+ D LD E+A G L + A D+G
Sbjct: 541 -----LVTTQAD---------------LDHEVAS-GVVLNISASDQG 566
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 38/61 (62%), Gaps = 7/61 (11%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY---SVRGGDG-LG-YFT 56
N P FS Y V+ENQP+GT V +++A+ +D G ++ I Y S+R GD +G YFT
Sbjct: 1638 NGPAFSRSSYSGIVRENQPVGTSVTSVRASYSD--GHSATIEYYITSIRAGDASVGRYFT 1695
Query: 57 I 57
I
Sbjct: 1696 I 1696
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 47/103 (45%), Gaps = 20/103 (19%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V+E+ + T+V + DAD G N + + G+ G F + H
Sbjct: 385 ASVEEDAALNTVVTLVTITDADQ-GPNGDVDLEILSGNEQGTFQV------THV------ 431
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
PG + V + LDREI YNLT+RA D G PPR T
Sbjct: 432 --PGLSI----VKVARSLDREITDQ-YNLTMRATDHGNPPRRT 467
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F Y ++ E+ PIGT V+T++A D D G N++I+Y + G+
Sbjct: 264 NPPIFDQSEYIVSLNESAPIGTSVLTVRATDID-EGTNAEITYLLDSGE----------- 311
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P F +IDP T + L+ LD E + Y + ++A D G+P
Sbjct: 312 PATKF-----QIDPRTGV----VTTLQELDYEESD-NYYVNVQAHDNGSP 351
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 13/115 (11%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P+F D Q + E+ G+ VI A DAD + +Y + G+
Sbjct: 150 NSPIFPDPSIQISFSESARTGSQVILDTATDADIGNSDITDNYRIVSGNA---------- 199
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
N F +V T +P + ++ + LDREI Y L + A D G+PPR Y
Sbjct: 200 -NNTFELVVTT-NPSGEASFLHLQTNQNLDREIRS-SYQLNISAQDGGSPPRYGY 251
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 43/109 (39%), Gaps = 21/109 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF +Y+ V E +GT V+T+ A D D Y ++ G+ F+I+ +
Sbjct: 3368 PVFEFSLYEGHVSEGDNVGTSVLTVSAIDNDLRADFRSFVYGIQDGNEGSAFSINQISGI 3427
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I LDRE YNLT+ A D G PP
Sbjct: 3428 --------------------ISTASRLDRETIDT-YNLTVTATDTGIPP 3455
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 22/109 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ YQ ++ EN V+ + A+D D G N+ + Y++ G+ G F ID+
Sbjct: 1216 NVPRFAQDTYQVSISENAQRSQQVVRVSASDMD-YGNNALVRYTITEGNDEGKFLIDSSS 1274
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGT 110
I++ +LLDRE+ Y+L + D +
Sbjct: 1275 G--------------------QIMLAQLLDREVEDF-YSLLVDVRDSAS 1302
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P F D A + +N P GT V A D D G N + YS+ G D FTID
Sbjct: 2415 NVPAFVDRSIDAYLPDNAPTGTFVALASATDPD-EGTNGDVRYSLSGSDA-NRFTID 2469
Score = 35.8 bits (81), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 22/96 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y T+ E+ P+ T V+ + A D D G N I Y++ G G +
Sbjct: 2310 NTPTFDQQSYTTTIAEDVPVNTDVLLVSATDLD-AGENGNIRYTLTGDLGDKF------- 2361
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPL 97
+++P T + I+ + LLDRE L
Sbjct: 2362 ----------EVNPATGQ----IITIGLLDRETQSL 2383
>gi|119625608|gb|EAX05203.1| FAT tumor suppressor homolog 4 (Drosophila) [Homo sapiens]
Length = 4929
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS VY+ + E P G+ V + A D D G+N+ + YS+ G+GLG+F I
Sbjct: 473 PVFSQQVYRVNLSEEAPPGSYVSGISATDGD-SGLNANLRYSIVSGNGLGWFHIS----- 526
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T G LDRE+A L + A D+G P+ +Y
Sbjct: 527 EHSGLVTTGSSGG-------------LDRELAS-QIVLNISARDQGVHPKVSY 565
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+F+ +Y + E PIGT V + A D+D S+ SY + G+ G F+
Sbjct: 3351 PIFTLNIYSVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGAFS------- 3403
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I V LDRE P+ YNL++ AVD GTP
Sbjct: 3404 ---------INPQTGQ----ITVTAELDRETLPI-YNLSVLAVDSGTP 3437
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y+ + EN GT +I + AAD D G N ++ Y + G+ F ID+
Sbjct: 2097 NNPIFAQALYKVEINENTLTGTDIIQVFAADGD-EGTNGQVRYGIVNGNTNQEFRIDSVT 2155
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I V K LDRE P Y+LT++A D+G+ PR
Sbjct: 2156 GA--------------------ITVAKPLDREKTPT-YHLTVQATDRGSTPR 2186
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD P N IS + GG NE HF + +K
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSPAANGNISVQILGG---------NEQ--RHFEVQSSK 413
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK-GTPPRETYKA 118
+ P I V LDRE P YNLT+ D G PP +A
Sbjct: 414 V-PNLSL----IKVASALDRERIP-SYNLTVSVSDNYGAPPGAAVQA 454
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N+ I Y ++ +EG
Sbjct: 246 NPPVFGSSHYQAGVPEDAVVGSSVLQVAAADAD-EGTNADIRYRLQ-----------DEG 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P ++DP T I V + LD E A Y+LT++A+D+G P
Sbjct: 294 -------TPFQMDPETGL----ITVREPLDFE-ARRQYSLTVQAMDRGVP 331
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 26/97 (26%)
Query: 25 VITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNI 84
++T++A D G+NS+++YS+ GD LG FT+D G L
Sbjct: 1913 ILTVRAED----GINSQLTYSIASGDSLGQFTVDKNGVLK-------------------- 1948
Query: 85 VVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
VLK LDRE YNL ++ D P + +T +
Sbjct: 1949 -VLKALDRESQSF-YNLVVQVHDLPQIPASRFTSTAQ 1983
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF Y TV EN P GT VI L A DAD G N+ I+Y+V+ D F ID
Sbjct: 3139 NSPVFLSDDYFPTVLENAPSGTTVIHLNATDAD-SGTNAVIAYTVQSSDS-DLFVID 3193
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF Y+ T+ E++P+ + ++A+D D G N +I+Y++ G+ F I +G
Sbjct: 992 NSPVFDQLSYEVTLSESEPVNSRFFKVQASDKD-SGANGEIAYTIAEGNTGDAFGIFPDG 1050
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D + + +VV DR + PL + + +
Sbjct: 1051 QL----YIKSELDRELQDRYVLMVVAS--DRAVEPLSATVNVTVI 1089
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y T+ E+ P GT V+ + A+DAD N+ ISY + GG+ FT
Sbjct: 2307 NVPTFASKAYFTTIPEDAPTGTDVLLVNASDAD-ASKNAVISYRIIGGN--SQFT----- 2358
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I+ LLDRE Y L + D G+P
Sbjct: 2359 -----------INPSTGQ----IITSALLDRETKD-NYTLVVVCSDAGSP 2392
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQAT+ E+ T V+ + A+D D G N I YS+ G+ F ID+
Sbjct: 1206 NAPKFLKDFYQATISESAANLTQVLRVSASDVD-EGNNGLIHYSIIKGNEERQFAIDSTS 1264
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ ++ LD E P Y+L ++AVD GT P
Sbjct: 1265 G--------------------QVTLIGKLDYEATP-AYSLVIQAVDSGTIP 1294
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G N+ + YS+ G + G F+
Sbjct: 1311 NTPSFPKSTLFVDVLENMRIGELVSSVTATDSD-SGDNADLYYSITGTNNHGTFS----- 1364
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1365 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1402
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 22/121 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS AT+ E+ IG++V T+ A D D MN I YS+ G+ G F I++
Sbjct: 3034 HTPEFSQSHMSATIPESHSIGSIVRTVSARDRD-AAMNGLIKYSISSGNEEGIFAINSST 3092
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ + + K LD E+ + +T+ A+D G R Y +
Sbjct: 3093 GI--------------------LTLAKALDYELCQ-KHEMTISAIDGGWVARTGYCSVTV 3131
Query: 122 N 122
N
Sbjct: 3132 N 3132
Score = 42.0 bits (97), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G VI A D+D G++ + SY + G+ G F +D
Sbjct: 131 NAPVFPDPSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIIRGNEAGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P R Y
Sbjct: 189 -----------ITLNPSGEGAFLHLVSKGGLDREVTP-QYQLLVEVEDKGEPKRRGY 233
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A +KEN+P G+ + T+ A D D G N + YS+ GD
Sbjct: 685 NSPVFYPVQYFAHIKENEPGGSYITTVSATDPD-LGTNGTVKYSISAGD 732
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP F Y V +N +GT +I + A D G+NS++ Y + + LG F +DN+
Sbjct: 2928 NAPQFLKSKYFTPVTKNVKVGTKLIRVTAIDDKDFGLNSEVEYFISNDNHLGKFKLDND 2986
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVFS Y V EN +G V ++ A+ D +NS ISY + GD G F I+
Sbjct: 789 NPPVFSQVAYSFVVFENVALGYHVGSVSASTMD---LNSNISYLITTGDQKGMFAIN 842
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 4 PVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
PVFS Y +V EN P GT ++ L+A D D G N + +S++ + E
Sbjct: 580 PVFSQPEGYDVSVVENAPTGTELLMLRATDGD-LGDNGTVRFSLQ----------EAETD 628
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
FR +DP + + + + LDRE Y+L + A D G+PP+ +
Sbjct: 629 RRSFR-----LDPVSGR----LSTISSLDREEQAF-YSLLVLATDLGSPPQSS 671
Score = 35.0 bits (79), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 23/99 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL-NHFRIVPTK 72
++ EN PIGT VI++ A D D +N ++SY TI + P NHF I K
Sbjct: 1428 SIVENIPIGTSVISVTAHDPD-ADINGQLSY-----------TIIQQMPRGNHFTIDEVK 1475
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
GT I +DRE A L + LT++A D+ P
Sbjct: 1476 ---GT------IYTNAEIDREFANL-FELTVKANDQAVP 1504
>gi|432879576|ref|XP_004073495.1| PREDICTED: protocadherin alpha-3-like [Oryzias latipes]
Length = 793
Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 19/115 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FSD +Y+ V EN P+GT VI + A DAD G N + YS+R + D +
Sbjct: 236 NIPIFSDSLYKTKVYENTPLGTTVIVVNATDAD-EGSNGDVMYSLR--------SRDQDH 286
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
L+ F I +I+ G K + NI +R+ + + + A DKG PP +
Sbjct: 287 ILDAFEI---EIETGVIKIKGNI---DFEERK----AFEIRVEASDKGQPPMSAH 331
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 50/119 (42%), Gaps = 22/119 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P + ATV+E+ GT+V + D D G N + V+G
Sbjct: 344 NPPTVTVTSLHATVREDAAAGTVVALVSVLDEDG-GENGDVEVHVKGE------------ 390
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
VP K++ K Y++ V LDRE YN+T+ A DKG+PP + P
Sbjct: 391 -------VPFKLET-NYKNHYSLSVNGQLDRETVSF-YNVTIVAHDKGSPPLSSTSVLP 440
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 20/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F + + VKEN +G ++ T+ A D D N +I YS+ ID++
Sbjct: 449 NAPLFQNSIIDIYVKENSAVGAVLKTVTAYDTDTE-ENGQIKYSL--------IQIDHKN 499
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P++++ + E I+ +K D E + ++A D G PP
Sbjct: 500 --------PSQVNINSDTGE--IISIKSFDYEKLKT-FQFKVQATDSGVPP 539
>gi|348518810|ref|XP_003446924.1| PREDICTED: protocadherin-16-like [Oreochromis niloticus]
Length = 3281
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 23/116 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS +V E+QP+G +++ + A D+D G N ++SY ++ G+ G F+
Sbjct: 1523 NAPVFSS-PSAVSVMEDQPVGFVILYVMARDSD-EGENGRVSYRIQAGNSAGRFS----- 1575
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
++P T ++ +LK LDRE + +NLT+ A D GTP T +
Sbjct: 1576 -----------LNPDTG----SLSILKSLDREEQEV-FNLTIVAEDHGTPQLSTSQ 1615
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ +YQ T+ E+ P G+ VIT+ A D D G N +I+Y V G++ G
Sbjct: 2348 NAPAFTHDLYQVTLPEHTPPGSAVITVTATDRD-SGENGRITYKVMSSTKEGFYIDPGNG 2406
Query: 62 PL--NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLR 104
L NH R+ + DP ++ +V++ DR + PL T++
Sbjct: 2407 TLFINH-RV---EFDP---ERPSVSIVIEARDRGLPPLSSFTTVQ 2444
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF Y+ATV E+ G+ V+T +A D+D N +++ G+ F I++
Sbjct: 2453 NAPVFHQSEYRATVSEDTIPGSTVLTFEAFDSDLSRENCGFDFAIASGNEGNAFQIESSV 2512
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
R T GT +++ + +D E L YNLT+ D+G P R + A
Sbjct: 2513 RFLEGRGFQTV---GT------LLLAEGVDFETKSL-YNLTVVVSDRGVPQRSSSVA 2559
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 18/108 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A++KEN P GT + + A D D G ISY++ G
Sbjct: 548 NTPVFSSNFYNASIKENTPAGTCFLEVSATDED-RGSFGTISYNLGSSSG---------- 596
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+PT+ K+ + LDR+ ++LT+ A D G
Sbjct: 597 -----NTLPTQFT--INKETGQLCTSTALDRDEGQDKFDLTVTATDGG 637
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 50/110 (45%), Gaps = 25/110 (22%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
APVF ++A V ENQ G V+T+ A D D G N +I+Y GG + EG
Sbjct: 1628 APVFLRAEFEAQVMENQGPGASVLTVTATDRD-QGSNGQITY---GG-------VSEEG- 1675
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
F I P GT I K LD E+ Y LT+ A D G PP
Sbjct: 1676 ---FIINPVT---GT------ITTTKELDTELQD-HYTLTVYARDGGLPP 1712
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 45/110 (40%), Gaps = 15/110 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTID- 58
N P F V A+++ENQP + V L A D D G+ ++ Y + R G G F +D
Sbjct: 2673 NHPFFPVDVLIASIRENQPANSAVTVLHAIDHD-TGVFGQLKYYMLERSGAGKESFAVDQ 2731
Query: 59 NEGPL-----------NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPL 97
N G + N F V +D G + V + E PL
Sbjct: 2732 NSGEIRSKIPFDFEKVNTFSFVAVAVDSGNHSATVTVQVFVTGEDEYDPL 2781
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P F+ Y T+ E GT +I L A D D N+++ YS+ G+ + FT+D
Sbjct: 2570 NPPAFTRAEYTVTLIEGATAGTEIIRLTATDPDST-PNAEVQYSISSGNEVNLFTVD 2625
Score = 35.4 bits (80), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y A +KE Q +I + A D D G N +++YS++ G F
Sbjct: 2143 NLPRFQLQNYVAYMKEAQGYEMPIIQVVAEDVDQ-GQNGQVTYSIQSSSMSGLF------ 2195
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
KIDP T +I ++DREI L + A D+G+P
Sbjct: 2196 ----------KIDPVTG----SITTAAIMDREIF-TQTKLVVTATDRGSP 2230
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG- 61
+PVF Y TV E+ GT V ++A+ ++ I YS+ GD GYFT+D+
Sbjct: 761 SPVFEQAQYFFTVSEDVLRGTAVGVVRASAKTGEALD--IFYSISSGDPHGYFTVDSASG 818
Query: 62 ------PLNH 65
PL+H
Sbjct: 819 TIRSALPLDH 828
>gi|326918941|ref|XP_003205743.1| PREDICTED: protocadherin Fat 4-like [Meleagris gallopavo]
Length = 5008
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y ++ EN G+ ++ DAD G NS++S+S+ GD +G+F IDN G
Sbjct: 1979 NPPVFSMTSYSTSLMENLAPGSAILNFSVTDADD-GSNSQLSFSIASGDSVGHFGIDNSG 2037
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L+ + + LDRE Y+L ++ D P Y +T +
Sbjct: 2038 VLS---------------------IQQPLDREKQSF-YSLVVQVHDMAPLPASRYTSTAQ 2075
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 60/110 (54%), Gaps = 15/110 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS +YQA V E+ P+G V+ + AADAD G N+ I Y + GGDG G +
Sbjct: 236 NPPVFSQTLYQARVPEDAPVGASVLQVAAADAD-EGTNADIRYRLEGGDGGGGEGASS-- 292
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+P ++DP + I + + LD E+ Y+LT++A D+G P
Sbjct: 293 -------LPFEVDPESGV----IRIREHLDYELCQ-QYSLTVQATDRGVP 330
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 6/113 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF VY+ + E P+G+ V L A D D G+N+ + YS+ G+ LG+F I L
Sbjct: 487 PVFEQSVYRVNISEEVPLGSYVRGLSATDRD-SGLNANLKYSIVSGNELGWFHISEHSGL 545
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ GT V LDRE L + A D+G P+ +Y
Sbjct: 546 ----VTTAGPGGGTAGHAGGASVTSGLDRETTS-QVVLNISARDQGVQPKFSY 593
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F + V EN +G LV ++ A D+D G N+ + YS+ G + G F+
Sbjct: 1350 NSPSFPKSILSVDVLENMRVGELVSSVTATDSD-SGDNADLHYSITGTNNHGTFS----- 1403
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1404 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1441
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 49/108 (45%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ Y + E P GT V + A D+D S+ SY + G+ F+
Sbjct: 3426 PVFTLGTYNIQISEGVPPGTHVTFVSAFDSDSVPSWSRFSYFIGSGNDNSAFS------- 3478
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + + V LDRE P+ YNL+L A+D GTP
Sbjct: 3479 ---------INPQTGQ----VTVTAELDREALPV-YNLSLLAIDSGTP 3512
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y+ T+ E++P+ + ++A+D D G+N +I+YS+ G+ F I +G
Sbjct: 1031 NPPVFDQLSYEITILESEPVNSRFFKVQASDKD-SGVNGEIAYSIIEGNAGDAFGIFPDG 1089
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D +++ +VV DR + PL + + +
Sbjct: 1090 QL----YIKSELDRELQERYVLLVVAS--DRAVEPLNATVNITVI 1128
Score = 41.6 bits (96), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 46/108 (42%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF Y A ++EN+P GT V T+ A D D G N + YS+ GD + G
Sbjct: 724 NSPVFYPVQYFAHIQENEPAGTYVTTVSATDPD-MGPNGTVKYSISAGDTSRFQVHSKTG 782
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
I+ TKI LDRE Y L + A D G
Sbjct: 783 ------IITTKI---------------ALDRE-ERTAYQLQVVATDGG 808
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 23/98 (23%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN GT+V L +DAD P N IS S+ G+ +F + H VP
Sbjct: 364 ASVDENAAPGTVVALLTVSDADSPAANGNISVSILAGNEQRHFEV-------HSSKVP-- 414
Query: 73 IDPGTKKKEYNIVVLKL---LDREIAPLGYNLTLRAVD 107
N+ ++K+ LDRE P YNLT+ D
Sbjct: 415 ----------NLSLIKVAAALDRERIP-AYNLTVAVAD 441
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 48/111 (43%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F +YQATV E T V+ + A+D D G N I YSV G+ F ID+
Sbjct: 1245 NAPKFLKDLYQATVSELAANLTQVLRVSASDVD-EGTNGLIHYSVIKGNEEKQFAIDS-- 1301
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ ++ LD E A Y+L ++AVD G P
Sbjct: 1302 ------------------STGQVTLVGKLDHE-ATASYSLVIQAVDSGAVP 1333
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+P FS Y V EN P GT VI L A+DAD G N+ I+Y+++ D F ID
Sbjct: 3214 NSPAFSPEDYFPKVLENAPSGTTVIRLNASDAD-SGPNAVIAYAIQSSDS-DLFVID 3268
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 50/117 (42%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMN--SKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G +I A DAD G N SY + G+ G F ++
Sbjct: 121 NAPVFPDPSIVVTFKEDTGSGRQLILDTATDAD-SGTNGVDHSSYRIVSGNEEGRFRLN- 178
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE P Y L ++ DKG P R Y
Sbjct: 179 -----------ITLNPSGEGAFLHLVSQGGLDREATP-SYQLLVQVEDKGEPRRRGY 223
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 13/113 (11%)
Query: 2 NAPVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDN 59
N P FS YQ ++ EN P GT ++ L A D D G N I +S++ + G+ +
Sbjct: 606 NKPCFSQPEGYQVSLAENSPSGTELLVLSAVDGD-LGDNGTIRFSLQEAEPGVVAVGPSS 664
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P FR +DP + K + + LDRE ++L + A D G+PP
Sbjct: 665 VTPRQVFR-----LDPVSGK----LSTISQLDRE-EQAHFSLQVLATDLGSPP 707
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 21/98 (21%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKI 73
++ EN P+G+ VI++ A D+D +N +++Y++ I NHFRI +
Sbjct: 1467 SIIENIPVGSSVISVTANDSD-ADINGQLTYAI----------IQQTPRGNHFRIDEVR- 1514
Query: 74 DPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
GT I +DRE A L + LT++A D+ P
Sbjct: 1515 --GT------IFTNAEIDREFANL-FELTVKATDQAVP 1543
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 25/108 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS ++ A+V EN P+G V + +D D GMN+ YS+R
Sbjct: 2793 NAPRFSQ-IFSASVPENAPLGFTVTRVTTSDED-IGMNAISRYSIRDTS----------- 2839
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+P I+P T +I V +LL+RE Y + + A D G
Sbjct: 2840 -------LPFIINPSTG----DITVSRLLNREDTDR-YRIRVSAHDSG 2875
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD-PPGMNSKISYSVRGGDGLGYFTIDNE 60
N P S Q V EN GTLV+TL+++D D PP Y + G YF++
Sbjct: 3530 NGPTLS--TRQGEVMENNRAGTLVMTLQSSDPDLPPNQGPFTYYLLSTGPATSYFSLSTA 3587
Query: 61 GPLNHFR 67
G L R
Sbjct: 3588 GVLTTTR 3594
>gi|47192822|emb|CAF87277.1| unnamed protein product [Tetraodon nigroviridis]
Length = 277
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 34/43 (79%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVFS VY+A++ EN P+ TLVIT++AADAD G+N ++Y
Sbjct: 229 NAPVFSQAVYKASLPENSPLDTLVITVRAADAD-EGVNGDVTY 270
>gi|291231659|ref|XP_002735777.1| PREDICTED: FAT tumor suppressor homolog 1-like [Saccoglossus
kowalevskii]
Length = 3815
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y ++E+ IGT ++ +++ DAD +N ISY + G+ G F ID
Sbjct: 3054 NAPVFSSDPYHIDIEESVAIGTTILHVQSTDADKD-INRLISYRIVSGNQAGSFRIDQ-- 3110
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
L + ++ KLLDRE + YN+T+ A D G P+ T
Sbjct: 3111 ALGY------------------VITDKLLDRE-SIATYNITIEAYDAGYEPQST 3145
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 52/116 (44%), Gaps = 21/116 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F + + V EN P G T++A DAD NS+ISY++ GGDG F+ID
Sbjct: 2843 NYPLFPSDLNEIYVDENVPSGYHFFTVQATDADID-ENSEISYAIVGGDGWAAFSID--P 2899
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
P R + +D K++ Y L + A D GTP T K
Sbjct: 2900 PSGKIRTAISTLDRERKERYY------------------LMITATDGGTPALSTLK 2937
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 20/108 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ VY A E+ IGT ++TL +D D G+NS +SY + G+ G FT+++ G
Sbjct: 2405 NYPIFTPTVYNAEWLEDTQIGTTLVTLACSDND-LGVNSDLSYQITAGNDEGKFTLESTG 2463
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
G + I++ ++LD E Y LT+ A D G
Sbjct: 2464 -------------SGVR-----ILLQQILDIE-NTAQYTLTVTAYDSG 2492
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL-GYFTIDNE 60
N P+F+ VY V+EN P T++ ++A+DAD N+ +S+++ GD + F I+++
Sbjct: 2949 NDPMFTPNVYVVNVRENLPNDTVIYQVRASDADIDN-NALLSFAIINGDDIPSKFAINDD 3007
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR 92
G V + P + +E I+ L++ D
Sbjct: 3008 GE------VSLVVSPDREDQETYILTLEVSDN 3033
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG-GDGLGYFTIDNE 60
N PV+ Y+ V+EN P+ T++ L D D P N+ I++++ G G+ F +D
Sbjct: 1844 NTPVYDPVTYEYEVRENTPVNTVIGQLLVTDEDDPA-NTVITFTIVGSGNSDAVFAVDTN 1902
Query: 61 GPL 63
G +
Sbjct: 1903 GEI 1905
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 10/67 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PV++ Y + EN GT V+T+ A D D NS ++Y++ D LG
Sbjct: 3264 NNPVYTQSEYAIDIDENLETGTSVLTVVATDID-INENSLLNYAIDTDDTLG-------- 3314
Query: 62 PLNHFRI 68
L+HF+I
Sbjct: 3315 -LDHFQI 3320
>gi|390354059|ref|XP_001198628.2| PREDICTED: protocadherin Fat 1-like [Strongylocentrotus purpuratus]
Length = 1151
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+APVF ++V +V E T V+T+ AAD D G++ ++SY++R G GLG F+ID+ G
Sbjct: 1093 HAPVFPNYVLTGSVHEGHINDTEVMTISAADMDM-GIDGEVSYTIRDGSGLGRFSIDSSG 1151
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 56/118 (47%), Gaps = 24/118 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N P F + +Y V+EN+P + V+ ++A+D D G N ISYS+ + + FTID+E
Sbjct: 520 NNPSFEEEIYTVEVEENRPAHSQVLVVRASDPD-LGENGFISYSIANLNAVP-FTIDHET 577
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
G +N K+LD E Y L +RA D G+P R KA
Sbjct: 578 GSIN---------------------TSKVLDYETMRHQYRLRVRASDWGSPFRREAKA 614
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 24/104 (23%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFR 67
F V E+ P+G V+T+ A D D G N K+ Y++ G+ +F +D E G L
Sbjct: 786 FRTSVEVPEDAPVGGTVLTVNANDLD-HGFNGKLLYAISDGNDKSHFQMDFETGELK--- 841
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
VL LDRE Y++T++ D G P
Sbjct: 842 ------------------VLMPLDRETQST-YDVTVKISDMGKP 866
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 18/105 (17%)
Query: 12 QATVKENQPIGTLVITLKAADADPPGMNSKIS-YSVRGGDGLGYFTIDNEGPLNHFRIVP 70
Q TV N IGT+ + D D G+N +I+ + GD G+F
Sbjct: 319 QPTVSRNSEIGTVFAVVGVTDEDG-GVNGEIAALDIIDGDPGGFF--------------- 362
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
++ P Y + + + L P +N+T+ A D+G P+ T
Sbjct: 363 -RVQPSPSPGRYQLQIARSLLSSSLPHAFNVTVAASDRGLSPKST 406
>gi|312374399|gb|EFR21960.1| hypothetical protein AND_15952 [Anopheles darlingi]
Length = 3475
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 57/113 (50%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQ--PIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P F D Y A + EN P G VIT++A DAD P NS++ Y ++ GD YF
Sbjct: 592 NPPTFLDSPYLAYIMENVIPPNGGYVITVRAYDADSPPFNSQVRYFLKEGD-TDYF---- 646
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
KI+ T + I +L+ LDRE+ Y LTL A+D G+PP
Sbjct: 647 ------------KINASTGE----ISLLRALDRELQE-EYILTLVAMDTGSPP 682
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 22/111 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLV-ITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
P F +Y+ T+ E P GT V +T+KA D D N++ SYS+ GG+ F
Sbjct: 1757 PEFLLDLYETTISEGDPPGTKVPVTVKAIDKDVRPQNNQFSYSIIGGNNDHSF------- 1809
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
KIDP + + E +LLDRE P+ + L + A+D G PP+
Sbjct: 1810 ---------KIDPQSGQIE----TARLLDREKIPV-HKLIVGAIDTGVPPQ 1846
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 23/124 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F Y + EN PI + V+T+ A D D G N ++ YS+ GD F I + G
Sbjct: 215 NAPIFDPMSYSNEIFENAPINSPVVTVSATDID-SGANGRVEYSITAGDEKEDFQIMSNG 273
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
I ++LDRE YNL + A D P + +T +
Sbjct: 274 ---------------------TIRTRRMLDRETKGT-YNLVITAQDCAKEPEKRLSSTVQ 311
Query: 122 NGLT 125
G +
Sbjct: 312 VGTS 315
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 21/113 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A + +G ++ L A D G+N++I Y V GG+G F ++
Sbjct: 1334 NPPVFSQTSYLAPAPKGATVGQRILQLIAKDELDFGVNAEIEYQVMGGNGSSRFAVN--- 1390
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
K+D VV+ + E Y L +RAVD+G PP++
Sbjct: 1391 ----------KLD--------GWVVVSGMLNETPGTVYTLNVRAVDRGVPPQQ 1425
Score = 43.1 bits (100), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP F+ +Y A + EN P + V A D D P N+ I YS+ GG G FTI+
Sbjct: 1545 NAPYFNQSLYNAYIAENSPASSFVYRALAHDRDSP-KNAIIVYSITGGTGKELFTIE 1600
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 52/117 (44%), Gaps = 28/117 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F Y A V ENQPIGT V+ +A D D G N++I Y + G
Sbjct: 699 HSPEFERQSYYAVVPENQPIGTKVVWPRATDKD-AGANARIVYRLVGEHA---------- 747
Query: 62 PLNHFRI--VPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG-TPPRET 115
+ FR+ V +I G +LDRE P+ Y TL A D T PR T
Sbjct: 748 --DRFRLDAVSGEITTGA-----------MLDREDVPI-YQFTLMAGDSSPTEPRAT 790
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
APVF YQ V EN+P+G+ ++T+ A D D G N + YS+ G+ F++
Sbjct: 1441 APVFQSPSYQVIVPENEPVGSTILTVSAPDND-DGPNGMVHYSILAGNERNDFSV 1494
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 43/110 (39%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPV VY A V E + L+ + A DAD N +I+Y +R
Sbjct: 1020 NAPVMDQQVYVAEVMEEESPSQLIAKVSATDAD-SDENGQITYHLR-------------- 1064
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ F D G I LDRE Y LT+ AVD+G P
Sbjct: 1065 --DDFEAFEINTDTG------EIYTTVRLDREEMAF-YTLTVDAVDQGVP 1105
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P F +V EN+P T+V+TL A+D D P + +Y + GG +FT++
Sbjct: 1862 NGPTFEANDTIGSVLENEPPNTVVMTLSASDPDLPPNGAPFTYHLVGGRHKSFFTLE 1918
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 23/106 (21%)
Query: 12 QATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDNEGPLNHFRIV 69
+ +V EN PI T+++ +KA D D G N + Y + R DG +V
Sbjct: 360 ETSVAENIPINTVIMAIKAVDRD-EGRNGYVEYQLDERSKDGT---------------VV 403
Query: 70 PTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
P + P + V LDREI Y+L + A D+G P + T
Sbjct: 404 PFAVGPADGL----LRVSGSLDREIKA-AYDLQVVAKDRGDPSKST 444
>gi|307197254|gb|EFN78559.1| Protein dachsous [Harpegnathos saltator]
Length = 2617
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 54/110 (49%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ Y ATV E G V+ L A+DAD GMNS+I Y + G+
Sbjct: 1474 NPPIFTQTQYSATVLEGNAKGDFVVKLSASDAD-QGMNSRILYHIVDGN----------- 1521
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P N F I P P + + NIV LDREI Y LT+ A D+G P
Sbjct: 1522 PDNAFTINP----PYSGIVQTNIV----LDREIRE-KYRLTIIATDQGNP 1562
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 25/108 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTIDNEGPLNHFRIVP 70
+V+E QP GT V ++A D D G N+ ++YS+ R DG FTID P+ ++
Sbjct: 466 SVREEQPPGTEVARVRALDTDF-GENASVTYSILKDRDSDGYNVFTID---PITG--MIR 519
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
TK VL +R + Y ++++A D G PPR + +A
Sbjct: 520 TK------------AVLDHEERNV----YRVSVKATDAGHPPRHSVRA 551
Score = 38.5 bits (88), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 6 FSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNH 65
F + Y V+EN +GT ++ + A D G ++SYS+ G+ G F I+ + L
Sbjct: 1334 FQNDTYNVIVQENAAVGTEIVQIIAVRTD--GRRQQVSYSIASGNNFGTFAINEDTGL-- 1389
Query: 66 FRI-VPTKID 74
R+ PT++D
Sbjct: 1390 LRVNEPTRLD 1399
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPG-MNSKISYSVRGGDGLGYFTID-N 59
N P F D +Y+ ++KE+ P G V L+A D D G + + Y + G+ G F ++
Sbjct: 1881 NYPRFLDELYEVSIKEDAPHGMTVAVLRAKDDDLAGSAAATLVYDITSGNDGGRFCVERT 1940
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAP 96
G + +V + +D + + YN+V++ ++P
Sbjct: 1941 TGAV----LVNSTLDCDIEPEVYNLVMMTCDSDPVSP 1973
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F Y V EN+P+GT V + +A+D D G+ ++YS+ G+ ID+
Sbjct: 1990 NSPKFPVSEYLEFVGENEPVGTTVFSARASDLD-RGIFGSLNYSIVSAAATGFSDIDDSW 2048
Query: 62 PL 63
L
Sbjct: 2049 KL 2050
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 53/117 (45%), Gaps = 27/117 (23%)
Query: 2 NAPVFS-DFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-N 59
N+P F + Y V ENQ I + T+ A+D D G N +ISYS+ GG+ FT++ +
Sbjct: 978 NSPEFRPNSCYTLAVPENQEIFG-IHTVAASDLDE-GNNGEISYSIIGGNIGSKFTLEPS 1035
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
G L+ F LDRE Y LT+ A DKG P E +
Sbjct: 1036 SGMLSMFS----------------------LDRETIS-KYVLTISAKDKGRPSLEAH 1069
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 47/114 (41%), Gaps = 24/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y + EN P GTLV ++ A D D NS + YSV +
Sbjct: 350 NDPRFEKDFYGFKLLENLPSGTLVGSVNATDPD-LDKNSLLRYSVVQSNS---------- 398
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+DP T K I + LDRE + + L L A D+GTP R T
Sbjct: 399 --------SFAVDPDTGK----ITTREPLDRETKEV-HELVLEARDQGTPSRAT 439
>gi|292628237|ref|XP_001920772.2| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Danio
rerio]
Length = 3006
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 54/111 (48%), Gaps = 21/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F +YQ TV E+ P+ T V+ + A+D D G N ++SY+ +GGD D EG
Sbjct: 867 NVPQFLRDIYQGTVFEDAPVYTSVLQVSASDRD-SGSNGRLSYTFQGGD-------DGEG 918
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
F I P T +K LDRE L Y L AVDKG PP
Sbjct: 919 D---FFIEPYSGIIRTARK---------LDRENVAL-YTLKAFAVDKGVPP 956
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 50/112 (44%), Gaps = 19/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F YQ +V EN+P GT VITLKA DAD GD G D E
Sbjct: 235 SAPQFQLPNYQVSVPENEPSGTRVITLKAFDAD-------------DGDA-GVVVYDMEA 280
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ +I+P T I L+ LDRE+ + + A DKG P R
Sbjct: 281 LFDSRSNNLFQINPETG----GITTLQPLDREVKDT-HVFKVTATDKGIPKR 327
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 50/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS+ Y V EN + T V +KA D D G N+K+ YS+ G+ G F I +
Sbjct: 451 NYPQFSEKRYVVQVSENIAVNTQVAVVKATDKD-AGNNAKVHYSIINGNIKGQFYIHS-- 507
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PT + I V+ LD E+ Y L ++A D G PP
Sbjct: 508 --------PTGV----------IDVVSPLDYEMIR-EYTLRVKAQDGGRPP 539
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL-GYFTIDNE 60
++PVF Y+ V+EN +G V+T++A D D P N+ + Y + D + F ID
Sbjct: 343 HSPVFEQNEYRVNVRENVEVGFEVMTIRATDGDAPS-NANMIYKIVNDDEVNSCFEID-- 399
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P N +V TK+ P DRE+ Y L + A D+G P
Sbjct: 400 -PRN--GLVRTKVRP---------------DREVKS-QYKLFVEANDQGREP 432
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ +Y V E+ +GT V+T+ A D D +NS ++Y + G+ F I ++
Sbjct: 662 NVPTFTQHLYNLKVNEDAVVGTSVLTVSAVDRD---VNSVVTYQISSGNTRNRFAISSQS 718
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 46/110 (41%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F +QA+V EN PIG VI ++A DAD G N+ + Y + F I+N
Sbjct: 557 NAPMFVSTPFQASVLENVPIGYSVIHIQAIDAD-SGDNAHLEYKLTDTSPGFPFVINNST 615
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ V LDRE Y+ + A D G P
Sbjct: 616 GW--------------------VTVSAELDRETTEF-YSFGVEARDHGVP 644
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF YQ V E++P+G+ V+ + A D D G N++I+Y + D + F ID
Sbjct: 766 PVFQSANYQVLVSEDRPVGSTVVVISATDED-TGENARITYVME--DNVPQFRID 817
>gi|119514251|gb|ABL75914.1| protocadherin 2A33 [Takifugu rubripes]
Length = 942
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 55/115 (47%), Gaps = 19/115 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y+A V+EN +GT+VI L A D D G N KI YS + N
Sbjct: 232 NTPVFTRSLYKARVRENTAVGTVVIRLNATDLD-EGQNGKIKYS--------FLKRGNSD 282
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
P N F + D G K V LD E P Y + ++A D+GT PR +
Sbjct: 283 PSNIFDL---NSDTGEIK------VKGELDYEDTP-AYEVRVQANDQGTTPRSAH 327
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 50/116 (43%), Gaps = 22/116 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S +KE+ +GT+V + D D G N V G
Sbjct: 340 NAPEISVTSLMTPLKEDAELGTIVALITVNDKDG-GKNGVAVCKVVGS------------ 386
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VP K+ K EY++VV LDRE + YN+T++A D+G PP T K
Sbjct: 387 -------VPFKL-KSNYKNEYSLVVDGALDRENTSV-YNVTVKATDEGDPPLSTIK 433
>gi|432957802|ref|XP_004085886.1| PREDICTED: protocadherin gamma-A2-like, partial [Oryzias latipes]
Length = 749
Score = 52.4 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG--GDGLGYFTIDN 59
NAPVF+ Y+ATV EN P GT+V + A+DAD G NS+I+YS+ G+ F ID
Sbjct: 228 NAPVFTQQTYKATVTENSPKGTVVAAVTASDAD-HGSNSRITYSITNTVGNVGNMFDIDK 286
Query: 60 E 60
E
Sbjct: 287 E 287
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVF Y+A + EN G + T+KA DAD N+++SY
Sbjct: 438 NAPVFERSSYEAYIVENNTPGVSIFTVKATDADWK-QNARVSY 479
>gi|363738275|ref|XP_425119.3| PREDICTED: neural-cadherin-like [Gallus gallus]
Length = 2503
Score = 52.4 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 40/120 (33%), Positives = 60/120 (50%), Gaps = 26/120 (21%)
Query: 2 NAPVF-SDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG-GDGLGYFTIDN 59
++PVF S + + + EN P+GT V T++A D D G+N I YS++ D + F ID
Sbjct: 1271 HSPVFHSQLIQTSPIFENMPVGTTVTTVRATDKD-SGLNGNIIYSIKSDSDPMRQFVIDQ 1329
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
G +++V LDRE+ Y+L ++A D+GTP ET AT
Sbjct: 1330 HG---------------------HVIVANKLDREVIQ-KYSLIVQASDQGTPA-ETGSAT 1366
Score = 45.1 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N PVF+ VY+ V E+Q +G+ +IT+ A D D G N+K+ Y + G+ G + E
Sbjct: 841 NKPVFTQSVYEVNVVEDQDVGSTIITVSANDED-EGTNAKLRYQITAGNTGGVLGVQPE 898
Score = 41.6 bits (96), Expect = 0.100, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGD 50
N P F+ +Y+A+V E IGT VI + A D D G N +I+YS+ GGD
Sbjct: 726 NVPFFTSSIYEASVTEGAGIGTFVIQVSATDLD-LGQNGEITYSLLHDHGGD 776
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 52/114 (45%), Gaps = 24/114 (21%)
Query: 2 NAPVFSDFVY---QATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVF Y A+V ENQP GT+V+ ++A DAD G N + Y + DG+
Sbjct: 405 NKPVFQKCHYYREHASVLENQPSGTVVLQVEATDAD-EGANGIVKYGLMHRDGV------ 457
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L F I P D G + +++ DRE Y +T+ A D+ P
Sbjct: 458 ----LPAFSIHP---DTGV------LTTVQVFDRE-KQREYPVTVTATDQAAEP 497
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP FS +Y++ V E+ TLV T+ A D D G ++Y + G+ G F +D +
Sbjct: 299 APEFSQAIYRSFVSEDAGPNTLVATVSALDPDGDG----VTYDIPSGNQKGNFVVDPKKG 354
Query: 63 LNHFRIVPTKIDPGTK 78
L R P GT+
Sbjct: 355 LIRLRSSPFPKLQGTE 370
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+ P F+ ++QA + EN I + ++ + A DAD G N+ +++S+ GD F I+N+
Sbjct: 1163 HVPNFTKEMWQAAIPENSAINSEILRVSATDAD-GGENAHLTFSIIRGDPDQKFYIEND 1220
>gi|410913727|ref|XP_003970340.1| PREDICTED: protocadherin alpha-8-like [Takifugu rubripes]
Length = 803
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 19/117 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y A + EN PIGT V+ + A D+D G+N ++ YS
Sbjct: 236 NMPVFAKDSYVAVLNENSPIGTTVLQVNATDSD-DGLNGEVVYSFGNN------------ 282
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
+NH KID T + I+V L+D E+ Y + ++A DKG P ET K+
Sbjct: 283 -VNHKMRKLFKIDENTGE----IIVKGLIDFEVKD-RYEIDIKASDKGAVPLETEKS 333
>gi|390337821|ref|XP_785601.3| PREDICTED: protocadherin Fat 4 [Strongylocentrotus purpuratus]
Length = 5000
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y+A V EN P T V+T+ A DAD G N+ Y + GGDG +FTI+ E
Sbjct: 3218 NPPVFLPREYRADVFENSPSATPVVTVTATDAD-TGTNADFEYIISGGDGTDFFTINPET 3276
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
L + +D T K Y++ V
Sbjct: 3277 GL---ILTQGNLDYETGKTTYHLTV 3298
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 41/112 (36%), Positives = 54/112 (48%), Gaps = 21/112 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+APVFS YQA V E++P G+ V + AAD D + +YS+ G NEG
Sbjct: 3432 DAPVFSSEQYQARVLESEPPGSDVTVVTAADYDEIPSFRQFNYSILRG---------NEG 3482
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
H ID T + I LLDRE + Y LT+ A+D G PP+
Sbjct: 3483 DAFH-------IDARTGR----ITTASLLDRETLSV-YFLTVAAIDTGNPPQ 3522
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP FS Y+AT+ E+ P+G + + A+D D G+NS I YS+ GD F ID
Sbjct: 2182 NAPAFSMTPYEATLDEDTPVGLEFLKVTASDPD-EGLNSIIRYSIFSGDSGRAFAID 2237
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 53/120 (44%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PV++ Y V E+ IGT V+TL A D D G N ++ +S+ GD
Sbjct: 1973 NNPVYNPVDYSEEVPEDVAIGTSVVTLTATDLD-SGSNGELQFSIASGD----------- 2020
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
P F + P GT IV +K LDRE YNL + A D P + +T +
Sbjct: 2021 PSQRFTVYPN----GT------IVTIKNLDREPESF-YNLEVVASDMTLDPEDRRSSTAQ 2069
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ YQA+V E TL+I + A D D G NS I YS+ G+ F ID+
Sbjct: 1230 PVFNRESYQASVSELAQNETLIIRVSATD-DDVGDNSYILYSIVSGNEEKRFHIDH---- 1284
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
IV++ LDRE+ GY L ++A D G P+E++
Sbjct: 1285 ----------------VHGQIVLIAPLDREVTE-GYVLRVKARDGGIVPQESF 1320
Score = 43.5 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 4/57 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAPVF D Y++++ E+ +G V T++A D D G+N +I+YS+ G D F+ID
Sbjct: 3116 NAPVFDDDTYRSSIAED--VGGYVATVRAED-DDSGINGEITYSISGADA-ALFSID 3168
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
+AP+F Y+A + E+ +G+ V ++ A DAD G+N+ I YS+ GD G+F IDN
Sbjct: 499 HAPMFLQESYRAGLLESIQVGSFVKSVTATDAD-EGINADIVYSIT-GDEYGWFQIDN 554
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 46/112 (41%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F VY +V E Q V+++ A D D N +SY++ G+ F I + G
Sbjct: 2691 NAPLFDQSVYFTSVVEEQSGQVQVVSVSATDEDSLS-NGDVSYAITLGNTNNAFDISSSG 2749
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
V T P LDRE Y LT+ A D G P +
Sbjct: 2750 -------VITTTQP--------------LDRETVA-SYILTVEATDGGNPSQ 2779
Score = 35.8 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ Y TV+EN P L+ L A D D G+N ++Y+ G F++D E L
Sbjct: 605 PVFNQIAYSETVEENSPARDLIQVL-ATDLD-NGVNGDVTYTFSSDQYSGMFSLDPESGL 662
Score = 35.8 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 17/29 (58%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 90 LDREIAPLGYNLTLRAVDKGTPPRETYKA 118
+DREI YNLT A D GTPPR TY++
Sbjct: 461 IDREIIA-SYNLTFAAEDMGTPPRRTYRS 488
Score = 35.4 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 24/116 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N PVFS Y V E++ +G V + A D D G+N +++YSV G G F +D
Sbjct: 1866 NDPVFSLSTYSFLVPEDEMVGEDVGVVVATDPD-AGLNGEVAYSVVEEGAPGEDVFYLDP 1924
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
FR+ + LD E+ Y +T+ A DKG+ PR +
Sbjct: 1925 --ATGAFRLQQS------------------LDYEVKQ-HYFMTVMATDKGSSPRSS 1959
Score = 35.4 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
N+P+F+ Y ATV E+ GT V+ L A D D G N I Y ++
Sbjct: 277 NSPIFTQTTYFATVNESSAAGTSVVHLNATDID-QGSNGDIVYRLK 321
>gi|198460509|ref|XP_001361746.2| GA11265 [Drosophila pseudoobscura pseudoobscura]
gi|198137039|gb|EAL26325.2| GA11265 [Drosophila pseudoobscura pseudoobscura]
Length = 3592
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 43/112 (38%), Positives = 59/112 (52%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDNE 60
NAPVF + +YQ+++ E+ +GT VI + A+D D G+N +I Y + D G F ID
Sbjct: 1008 NAPVFKNPLYQSSILEDALVGTSVIQVSASDPD-IGLNGRIKYLLSDRDVEDGSFVID-- 1064
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PT GT + K LDRE + Y+LT AVDKG+PP
Sbjct: 1065 ---------PTS---GTVRTN------KGLDRESVAV-YHLTAIAVDKGSPP 1097
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 57/110 (51%), Gaps = 19/110 (17%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP+F + Y A+V E+ P+GT V+ + A D+D G+N++I+YS+ NE
Sbjct: 899 APIFENAPYSASVFEDAPVGTTVLVVSATDSD-VGINAQITYSL------------NEES 945
Query: 63 LNHF-RIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+N P I+P T IV LDRE GY LT+ A D G+P
Sbjct: 946 INGLGSPDPFSINPQTGA----IVTNAPLDRETTS-GYLLTVTAKDGGSP 990
Score = 43.1 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F +Q +V EN P+G +I ++A D+D G N++I+YS+ D DN
Sbjct: 690 NAPRFYTSQFQESVLENVPVGYNIIRVQAYDSD-EGPNAEITYSISERD-------DN-- 739
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P +DP T + +K LDRE + + A D G PP+
Sbjct: 740 -------FPLAVDPRTGW----VQTIKQLDRE-EQSRFAFQVVAKDGGVPPK 779
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F+ Y+A V E+QP GT V T+ A D P +S++ Y + G+ G F I ++
Sbjct: 795 NDPTFNPKYYEANVGEDQPQGTPVTTVTATD---PDEDSRLHYEITTGNTRGRFAITSQ 850
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 15/119 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG-GDGLGYFTIDNE 60
++P F ++A+++E +G+ VITL+A D D G N++I Y + DG G T D E
Sbjct: 465 HSPTFEAEQFEASIREGATVGSTVITLRATDQD-IGKNAEIEYGIETVTDGTGS-TQDQE 522
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
P+ FRI + I LDRE + Y+L + A D E AT
Sbjct: 523 LPI--FRI---------DSRSGVISTRSSLDRETSD-SYHLLVTASDMAAAQSERKTAT 569
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 25/115 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGT---LVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P FS+ Y V E+Q G+ V ++A DAD G N+ I Y++ GG+ F+ID
Sbjct: 582 NYPQFSERTYTVQVPEDQWGGSEDNTVAHIRATDADQ-GNNAAIRYAIIGGNTQSQFSID 640
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ ++ ++K LD E + Y L +RA D G+P R
Sbjct: 641 SMSG--------------------DVSLVKPLDYE-SVRSYRLVIRAQDGGSPSR 674
Score = 39.3 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT-IDNEGP 62
P F+ V EN P+G++V + A D D G+N+ + YS+ GGD F+ + G
Sbjct: 1116 PTFASDKITLYVPENSPVGSVVGEIHAHDPD-EGVNAVVHYSIIGGDDSNSFSLVTRPGS 1174
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVV 86
+ T++D + +K + +VV
Sbjct: 1175 ERAQLLTMTELDYESSRKRFELVV 1198
>gi|156382383|ref|XP_001632533.1| predicted protein [Nematostella vectensis]
gi|156219590|gb|EDO40470.1| predicted protein [Nematostella vectensis]
Length = 2676
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF Y A E P+GT+V+ + AAD D G N ++ ++++ GD G F ID
Sbjct: 2405 PVFGQSGYMAQWSEGIPVGTIVVNVSAADKD-SGANGRVWFAIQSGDDKGSFAID----- 2458
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+K I + LD E +++++RA D+G+PP T
Sbjct: 2459 ---------------RKTGVIRTQRALDHETIKT-HHVSVRATDEGSPPMHT 2494
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 22/92 (23%)
Query: 24 LVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYN 83
V+ + A D D G N K++YS+ G+ G FTID+
Sbjct: 2087 FVVKVTATDVDS-GTNGKVTYSIWTGNEAGVFTIDSTTG--------------------E 2125
Query: 84 IVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I KLLDRE ++L +R D G PP+ T
Sbjct: 2126 ITTAKLLDRETTA-SFDLVIRGTDSGIPPKST 2156
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 22/108 (20%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
YQ T EN IGT V + +DAD G N +++ ++ GGDG YF++ F ++
Sbjct: 289 YQVT--ENATIGTQVARVSVSDADS-GKNGEVNVTLEGGDG--YFSM-------KFDVL- 335
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
E I V + LDRE + L +DKG PPR T K+
Sbjct: 336 --------NDESIIAVGQSLDRETHD-HFFLKAVCIDKGDPPRTTEKS 374
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ ++ TV EN+P GT V+ + A D D G N++++YS+ G + F+ID L
Sbjct: 1539 PEFTRDLFIGTVSENKPTGTSVVKVTAYDRD-SGSNAELTYSIPSGVEMDKFSIDKHSGL 1597
Query: 64 NHFRIVPTKIDPGTKKKEYNIVV 86
IV I KK Y + V
Sbjct: 1598 ----IVTNSILDREKKDTYFLTV 1616
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG 49
+P FS Y TV E+ P+G+ ++TL A D D G NS I+Y + G
Sbjct: 1116 SPKFSKNKYSVTVNEDLPVGSSLLTLIATDDDQQGPNSDITYMIVAG 1162
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y VKEN+P+ T + + A+D+D G N ++Y R + F +D
Sbjct: 1012 NNPHFQQASYAFFVKENEPVATYLGAVSASDSD-EGSNGHVTY--RFDTQVAQFIVD--- 1065
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
K+ I ++LDRE A Y ++ A D G+ PR
Sbjct: 1066 -----------------KQTGKITTSQVLDRE-AKASYVFSIVATDGGSSPR 1099
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 12/67 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F + EN PI T V T+KA D D G+NS+I ++TID++
Sbjct: 1326 NRPTFDKNPIITWIYENVPINTNVTTIKAHD-DDSGLNSRI-----------WYTIDSQS 1373
Query: 62 PLNHFRI 68
P HF+I
Sbjct: 1374 PRAHFKI 1380
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 47/113 (41%), Gaps = 23/113 (20%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+PVF ++ Y A V E P + +I + A D D G N +ISY+ F + N G
Sbjct: 909 SPVFGNWSYTAHVLETTPPDSNIIEVVATDVD-SGENGRISYAFDSKVDTSKFGLRNGG- 966
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I + LDRE YNL + A+D GTP R +
Sbjct: 967 --------------------KIFIKSKLDREDIE-EYNLKVIAIDHGTPRRSS 998
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 43/108 (39%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y EN IG + LKA D D P + + + G+ F++D G
Sbjct: 595 NQPVFDPSSYSVEYFENTRIGQSICQLKAIDRDSPKF-AITRFIIEQGNADEVFSVDGSG 653
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
I + KLLDRE Y LT++AVD G
Sbjct: 654 L---------------------ITLAKLLDRETQD-NYLLTVKAVDGG 679
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N PVF +Y +T+ E P GT ++ L A+D D G N I Y++ D G ++ID+
Sbjct: 1746 NPPVFQQSLYSSTISELTPPGTSILNLTASDKD-SGSNGNIVYTL-SNDTYGVYSIDS 1801
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 18/110 (16%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP F Y+ V EN + TLV + A D D G NS++ Y++ T ++
Sbjct: 386 APKFDRHTYETRVWENATVNTLVAIVNAVDQD-FGSNSELVYTIAN-------TTESRSY 437
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L+ F IDP + I LDRE P LT+ D+G+PP
Sbjct: 438 LHWF-----AIDPSSGM----ITTATDLDREQIPQVV-LTVLVHDRGSPP 477
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 20/98 (20%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
V EN P+ + + + A D D G N+++S++V GG G G F ID
Sbjct: 2522 VLENLPLNSRLYEINATDRDS-GANARLSFTVIGGTGQGLFLID---------------- 2564
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K + + A Y+LT++A D G PP
Sbjct: 2565 ---KFSGWLTTNITFDYENTAVYQYSLTIKATDAGNPP 2599
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 23/121 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS+ Y T+ EN +GT ++ + A+D D G N++I YS+ +
Sbjct: 168 NKPEFSNVSYSGTIPENIDVGTSILQVSASDKD-IGTNAEIQYSIET----------HSD 216
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKL-LDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
P F I PT ++V + LD E A Y + ++A DKG+ + + A
Sbjct: 217 PQAIFGIHPTT----------GVIVNNVRLDYE-AKRSYLIVVKAEDKGSSHQLSSSAIV 265
Query: 121 R 121
R
Sbjct: 266 R 266
>gi|440902397|gb|ELR53194.1| Protocadherin alpha-3, partial [Bos grunniens mutus]
Length = 685
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 53/114 (46%), Gaps = 25/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR---GGDGLGYFTID 58
NAP F +Y+ + EN P GTLV+T+ A+D D G+N I YS D L F +D
Sbjct: 221 NAPEFESTIYKVKLFENAPNGTLVVTVNASDLD-EGINKDIVYSFNTDTSADTLSKFHLD 279
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+N + IV I D E+ L Y + + A DKG PP
Sbjct: 280 ---PVNGYIIVKGDI-----------------DFELTKL-YEIQVEATDKGNPP 312
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 18/110 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF V + E++P G+ + A+DAD G NS ++Y + + YFT+D +
Sbjct: 112 NPPVFPMAVKNLFIYESRPPGSRIPLEGASDAD-IGANSLLTYRLNSNE---YFTLDVK- 166
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
N I K +V+ KLL+RE P ++L + AVD G P
Sbjct: 167 -RNDEEI-----------KSLGLVLKKLLNREDTP-EHHLLITAVDGGKP 203
Score = 35.0 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F Y VKEN P G + T+ A DAD N+ +SYS+
Sbjct: 434 NAPAFVQPEYTMFVKENNPPGCHIFTVSARDADAQ-ENALVSYSL 477
>gi|432878487|ref|XP_004073333.1| PREDICTED: protocadherin gamma-A6-like [Oryzias latipes]
Length = 798
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 63/132 (47%), Gaps = 18/132 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR--GGDGLGYFTID- 58
NAPVF+ +++A+VKEN P G L++ L A DAD GMN +I+Y D +F++D
Sbjct: 220 NAPVFAQQIFKASVKENMPKGKLIVRLSATDAD-EGMNGRITYHFNRMSRDVAEFFSLDE 278
Query: 59 NEGPLNH-----------FRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
N G L F I D G + N+++ + + APL +TL ++
Sbjct: 279 NSGDLTVNSAIDYENDKIFEIGVQAKDQGGQSTSTNVIIEVVDVNDNAPL---ITLTSLS 335
Query: 108 KGTPPRETYKAT 119
P AT
Sbjct: 336 STIPEDSPIGAT 347
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 22/116 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+ + +T+ E+ PIG V + D D G N K+ SV
Sbjct: 325 NAPLITLTSLSSTIPEDSPIGATVAIIHVKDID-SGKNGKVDCSVNA------------- 370
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
N I+ T + K + +V +L+RE P YN+T AVD+G+P T K
Sbjct: 371 --NIPFIIQTSL-----KNYFTLVTNGVLNRESVP-EYNITFTAVDEGSPALSTNK 418
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY-----SVRGGDGLGYFT 56
NAP+F Y A V EN G V ++KA DAD G N+++SY + G Y +
Sbjct: 430 NAPIFESSFYDADVVENNSPGLSVFSVKANDAD-FGQNARVSYFLIDSELNGSPSSSYVS 488
Query: 57 IDNEG 61
I+ E
Sbjct: 489 INAES 493
>gi|119514202|gb|ABL75865.1| protocadherin 2A25 [Takifugu rubripes]
Length = 935
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 19/117 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y A + EN PIGT V+ + A D+D G+N ++ YS
Sbjct: 236 NMPVFAKDSYVAVLNENSPIGTTVLQVNATDSD-DGLNGEVVYSFGNN------------ 282
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
+NH KID T + I+V L+D E+ Y + ++A DKG P ET K+
Sbjct: 283 -VNHKMRKLFKIDENTGE----IIVKGLIDFEVKD-RYEIDIKASDKGAVPLETEKS 333
>gi|350587824|ref|XP_003482493.1| PREDICTED: protocadherin Fat 4-like [Sus scrofa]
Length = 1741
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 51/108 (47%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS +Y + E P GT V + A D+D S+ SY + G+ G F+
Sbjct: 1187 PVFSLNIYSVQISEGVPTGTHVTFVSAFDSDSVPSWSRFSYFIGSGNENGAFS------- 1239
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I V LDRE P+ YNLT+ AVD GTP
Sbjct: 1240 ---------INPQTGQ----ITVTAELDRETLPI-YNLTVLAVDSGTP 1273
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF Y TV EN P GT VI L A DAD G N+ I+Y+V+ D F ID
Sbjct: 975 NSPVFLPDEYFPTVLENAPSGTTVIHLNATDAD-SGTNAVIAYTVQSSDS-DLFVID 1029
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 22/121 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS AT+ E+ IG +V T+ A D D MN + YS+ G+ G F I++
Sbjct: 870 HTPEFSQSHMSATIPESHSIGAIVRTVSARDRD-TAMNGLVRYSISSGNEEGIFAINSST 928
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ + + K LD E+ + +T+ A D G R Y +
Sbjct: 929 GI--------------------LTLAKALDYELCQ-KHEMTISATDGGWVARTGYCSVTV 967
Query: 122 N 122
N
Sbjct: 968 N 968
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 25/113 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y V +N +GT +I + A D G+NS++ Y + + LG F +DN
Sbjct: 764 NAPQFLQTKYFTPVTKNVKVGTKLIKVTAVDDKDFGLNSEVEYFILNENHLGKFKLDN-- 821
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYN--LTLRAVDKGTPP 112
N + + I+ L N +T+ A DKG PP
Sbjct: 822 ---------------------NTGWISVASSLISDLNQNFLITVTAKDKGNPP 853
>gi|355566954|gb|EHH23333.1| hypothetical protein EGK_06782, partial [Macaca mulatta]
Length = 3492
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 1823 NAPVFAQEVYRGNVKESDPPGEVVAVLSTWDRDTSDINRQVSYHITGGNPRGRFAL---- 1878
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 1879 --------------GLVQSEWKVYVKRPLDREEQDI-YFLNITATD 1909
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS VY + E+ +G VI L A D D N +I +S+ GD FT+D
Sbjct: 2240 NPPKFSQDVYSTVISEDALVGDSVILLIAEDVDSQP-NGQIHFSIVNGDRDNEFTVDPVL 2298
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
L + V K LDRE GY+L ++AVD G PP +
Sbjct: 2299 GL--------------------VKVKKKLDRERVS-GYSLLVQAVDSGIPPMSS 2331
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI ++A D D PG +ISY++ F ID+ G
Sbjct: 1396 SPAFSQSTYVAEVRENAAAGTKVIHVRATDGD-PGTYGQISYAIINDFAKDRFLIDSNGQ 1454
Query: 63 L 63
+
Sbjct: 1455 V 1455
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D S+S+ G+ F +D+ G
Sbjct: 2345 NSPVFTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPPFSFSILSGNEEEEFVLDSHG 2404
Query: 62 PL 63
L
Sbjct: 2405 IL 2406
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 17/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ S+ +Y V EN P VI ++A D D N K++Y + G+ +F I
Sbjct: 47 NAPLTSEPIYYPVVMENSPKDISVIQIQAEDPDSSS-NEKLTYRITSGNPQNFFAINIKT 105
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNI-VVLKLLDR 92
D E HF V T D G K+ I VV+++LD
Sbjct: 106 GLITTTSRKLDREQQAEHFLEV-TVTDGGPSPKQSTIWVVVQVLDE 150
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D++
Sbjct: 1293 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYSILSGNDRTSFLMDSKS 1351
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ GT V+ + A D G N++I+Y +R G+ G F
Sbjct: 2135 NPPVFERRDYLVTVPEDTSPGTQVLAVFATSKDI-GTNAEITYLIRSGNEQGKF------ 2187
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
KI+P T I V ++LD E+ Y L + A D GTP
Sbjct: 2188 ----------KINPKTG----GISVSEVLDYELCKRFY-LVVEAKDGGTP 2222
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y A + E+ P +++ + A DAD G N I YS+ G +F
Sbjct: 1928 NSPVCEQVAYTALLPEDIPSNKIILKVSAKDAD-IGSNGDIRYSLYGSGNSEFF------ 1980
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+DP + + + L LLDRE P+ Y+L +A D G
Sbjct: 1981 -----------LDPESGE----LKTLALLDRERVPV-YSLMAKATDGG 2012
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 25/120 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVF Y A V+ + GTL+ + A D D G N +++Y ++ D G+F I+ N
Sbjct: 983 NSPVFVGLPYYAAVQVDAEPGTLIYQVTAIDKD-KGPNGEVTYVLQ--DDYGHFEINPNS 1039
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
G N+++ + + +++ + Y +T+ A D G P T P
Sbjct: 1040 G---------------------NVILKEAFNSDLSNIEYGVTILAKDGGKPSLSTSVELP 1078
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG----LGYFTI 57
N PVF Y + E P+GT + ++A D D G N +++YS+ + F I
Sbjct: 1713 NKPVFETSSYDTIIMEGMPVGTKLTQVRAIDMD-WGANGQVTYSLHSDSQPEKVMEAFNI 1771
Query: 58 D-NEGPLNHFRIVPTKIDP 75
D N G ++ + + + DP
Sbjct: 1772 DSNTGWISTLKDLDHETDP 1790
Score = 35.0 bits (79), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++P F++ +Y+A+V E+ +G+ V+ + A D D G N+++ Y++ G+ F I+
Sbjct: 465 HSPYFTNPLYEASVFESAALGSAVLQVTALDKD-KGENAELIYTIEAGNTGNTFKIE 520
>gi|410913733|ref|XP_003970343.1| PREDICTED: protocadherin alpha-2-like [Takifugu rubripes]
Length = 821
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 55/115 (47%), Gaps = 19/115 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y+A V+EN +GT+VI L A D D G N KI YS + N
Sbjct: 261 NTPVFTRSLYKARVRENTAVGTVVIRLNATDLD-EGQNGKIKYS--------FLKRGNSD 311
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
P N F + D G K V LD E P Y + ++A D+GT PR +
Sbjct: 312 PSNIFDL---NSDTGEIK------VKGELDYEDTP-AYEVRVQANDQGTTPRSAH 356
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 50/116 (43%), Gaps = 22/116 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S +KE+ +GT+V + D D G N V G
Sbjct: 369 NAPEISVTSLMTPLKEDAELGTIVALITVNDKDG-GKNGVAVCKVVGS------------ 415
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VP K+ K EY++VV LDRE + YN+T++A D+G PP T K
Sbjct: 416 -------VPFKL-KSNYKNEYSLVVDGALDRENTSV-YNVTVKATDEGDPPLSTIK 462
>gi|296222837|ref|XP_002757361.1| PREDICTED: cadherin-7 isoform 1 [Callithrix jacchus]
gi|296222839|ref|XP_002757362.1| PREDICTED: cadherin-7 isoform 2 [Callithrix jacchus]
Length = 785
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G N+++ Y + GDGLG F
Sbjct: 258 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-IGANAEMEYKIVDGDGLGIF------ 310
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
KI + +E I + K LD E A Y L + A +K PR
Sbjct: 311 ----------KISVDKETQEGIITIQKELDFE-AKTSYTLRIEAANKDADPR 351
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
Score = 35.4 bits (80), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNEGP 62
PVFS +Y V E IG ++ T+ A DP NS + YS+ R D YF ID
Sbjct: 375 PVFSSPLYPMEVSEATQIGNIIGTVAA--HDPDSSNSPVRYSIDRNTDLERYFNIDANSG 432
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I K LDRE + +N+T+ A++ P +
Sbjct: 433 V--------------------ITTAKSLDRETNAV-HNITVLAMESQNPSQ 462
>gi|403267948|ref|XP_003926055.1| PREDICTED: cadherin-7 [Saimiri boliviensis boliviensis]
Length = 785
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G N+++ Y + GDGLG F
Sbjct: 258 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-IGANAEMEYKIVDGDGLGIF------ 310
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
KI + +E I + K LD E A Y L + A +K PR
Sbjct: 311 ----------KISVDKETQEGIITIQKELDFE-AKTSYTLRIEAANKDADPR 351
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
>gi|332230382|ref|XP_003264370.1| PREDICTED: cadherin-7 isoform 1 [Nomascus leucogenys]
gi|332230384|ref|XP_003264371.1| PREDICTED: cadherin-7 isoform 2 [Nomascus leucogenys]
Length = 785
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G N+++ Y + GDGLG F
Sbjct: 258 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-IGANAEMEYKIVDGDGLGIF------ 310
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
KI + +E I + K LD E A Y L + A +K PR
Sbjct: 311 ----------KISVDKETQEGIITIQKELDFE-AKTSYTLRIEAANKDADPR 351
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
Score = 35.0 bits (79), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNEGP 62
PVFS +Y V E +G ++ T+ A DP NS + YS+ R D YF ID
Sbjct: 375 PVFSSPLYPMEVSEATQVGNIIGTVAA--HDPDSSNSPVRYSIDRNTDLERYFNIDANSG 432
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I K LDRE + +N+T+ A++ P +
Sbjct: 433 V--------------------ITTAKSLDRETNAI-HNITVLAMESQNPSQ 462
>gi|16306487|ref|NP_387450.1| cadherin-7 preproprotein [Homo sapiens]
gi|16306489|ref|NP_004352.2| cadherin-7 preproprotein [Homo sapiens]
gi|114673478|ref|XP_001149085.1| PREDICTED: cadherin-7 isoform 1 [Pan troglodytes]
gi|114673480|ref|XP_001149161.1| PREDICTED: cadherin-7 isoform 2 [Pan troglodytes]
gi|397514079|ref|XP_003827328.1| PREDICTED: cadherin-7 isoform 1 [Pan paniscus]
gi|296434420|sp|Q9ULB5.2|CADH7_HUMAN RecName: Full=Cadherin-7; Flags: Precursor
Length = 785
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G N+++ Y + GDGLG F
Sbjct: 258 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-IGANAEMEYKIVDGDGLGIF------ 310
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
KI + +E I + K LD E A Y L + A +K PR
Sbjct: 311 ----------KISVDKETQEGIITIQKELDFE-AKTSYTLRIEAANKDADPR 351
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNEGP 62
PVFS +Y V E +G ++ T+ A DP NS + YS+ R D YF ID
Sbjct: 375 PVFSSPLYPMEVSEATQVGNIIGTVAA--HDPDSSNSPVRYSIDRNTDLERYFNIDANSG 432
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I K LDRE + +N+T+ A++ P +
Sbjct: 433 V--------------------ITTAKSLDRETNAI-HNITVLAMESQNPSQ 462
>gi|397514081|ref|XP_003827329.1| PREDICTED: cadherin-7 isoform 2 [Pan paniscus]
Length = 869
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G N+++ Y + GDGLG F
Sbjct: 342 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-IGANAEMEYKIVDGDGLGIF------ 394
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
KI + +E I + K LD E A Y L + A +K PR
Sbjct: 395 ----------KISVDKETQEGIITIQKELDFE-AKTSYTLRIEAANKDADPR 435
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 233 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 289
Score = 35.0 bits (79), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNEGP 62
PVFS +Y V E +G ++ T+ A DP NS + YS+ R D YF ID
Sbjct: 459 PVFSSPLYPMEVSEATQVGNIIGTVAA--HDPDSSNSPVRYSIDRNTDLERYFNIDANSG 516
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I K LDRE + +N+T+ A++ P +
Sbjct: 517 V--------------------ITTAKSLDRETNAI-HNITVLAMESQNPSQ 546
>gi|119583578|gb|EAW63174.1| cadherin 7, type 2, isoform CRA_b [Homo sapiens]
Length = 630
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G N+++ Y + GDGLG F
Sbjct: 258 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-IGANAEMEYKIVDGDGLGIF------ 310
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
KI + +E I + K LD E A Y L + A +K PR
Sbjct: 311 ----------KISVDKETQEGIITIQKELDFE-AKTSYTLRIEAANKDADPR 351
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNEGP 62
PVFS +Y V E +G ++ T+ A DP NS + YS+ R D YF ID
Sbjct: 375 PVFSSPLYPMEVSEATQVGNIIGTVAA--HDPDSSNSPVRYSIDRNTDLERYFNIDANSG 432
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I K LDRE + +N+T+ A++ P +
Sbjct: 433 V--------------------ITTAKSLDRETNAI-HNITVLAMESQNPSQ 462
>gi|6483290|dbj|BAA87415.1| cadherin-7 [Homo sapiens]
gi|119583577|gb|EAW63173.1| cadherin 7, type 2, isoform CRA_a [Homo sapiens]
gi|119583579|gb|EAW63175.1| cadherin 7, type 2, isoform CRA_a [Homo sapiens]
Length = 785
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G N+++ Y + GDGLG F
Sbjct: 258 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-IGANAEMEYKIVDGDGLGIF------ 310
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
KI + +E I + K LD E A Y L + A +K PR
Sbjct: 311 ----------KISVDKETQEGIITIQKELDFE-AKTSYTLRIEAANKDADPR 351
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
Score = 35.0 bits (79), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNEGP 62
PVFS +Y V E +G ++ T+ A DP NS + YS+ R D YF ID
Sbjct: 375 PVFSSPLYPMEVSEATQVGNIIGTVAA--HDPDSSNSPVRYSIDRNTDLERYFNIDANSG 432
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I K LDRE + +N+T+ A++ P +
Sbjct: 433 V--------------------ITTAKSLDRETNAI-HNITVLAMESQNPSQ 462
>gi|242024858|ref|XP_002432843.1| Cadherin-23 precursor, putative [Pediculus humanus corporis]
gi|212518352|gb|EEB20105.1| Cadherin-23 precursor, putative [Pediculus humanus corporis]
Length = 2799
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 25/116 (21%)
Query: 2 NAPVF----SDFVYQATVKENQPIGTLVITLKAADADPPGM-NSKISYSVRGGDGLGYFT 56
NAP+F SD +Y+ T+ E+ PIGT VITL A D D PG N++++Y + G+ F
Sbjct: 1971 NAPIFQGLNSDGIYEVTLSESSPIGTSVITLFANDTDLPGGPNTELTYDIISGNDENLFY 2030
Query: 57 IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I++ K+ I V LLD + YNL +R D G P
Sbjct: 2031 IES--------------------KDGTIKVNNLLDYDDGITVYNLLVRVSDGGKYP 2066
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 49/107 (45%), Gaps = 25/107 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTIDNEGPLNHFRIVP 70
+V+E QP GT V +KA D D G NS I+YS+ R DG FTID P+
Sbjct: 646 SVREEQPGGTEVTKIKAIDKD-KGKNSTITYSILKGRDSDGYDLFTID---PITG----- 696
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+I LD E + Y L + A D G PP++T +
Sbjct: 697 ------------SIRTRTTLDHEERSI-YRLAVAATDGGKPPKQTIR 730
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y A+V E GT V+ + A D D G N+ + Y + G+ F I E
Sbjct: 1555 NAPKFTQEYYTASVWEGNNKGTYVMQVSATDLD-EGSNAHVLYHIVDGNHDNAFVI--EP 1611
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P + +V T I +LDREI + Y LT+ A D+G P
Sbjct: 1612 PFSG--LVKTNI---------------VLDREIRDV-YKLTIIATDEGNP 1643
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 18/113 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYF-TIDNE 60
NAP+F Y V E+ PI + ++ + A D D G N++I+Y ++ G G +D+E
Sbjct: 416 NAPIFERSEYYVNVIESLPINSQILQVAATDQD-TGNNARITYRIKKIIGNGTTGNVDDE 474
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKL-LDREIAPLGYNLTLRAVDKGTPP 112
F I P ++ LK LDRE Y++ + A D GTPP
Sbjct: 475 T----FGIFPNS----------GLIYLKENLDRETIN-KYDVLITATDNGTPP 512
Score = 38.5 bits (88), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNE 60
N P F Y V EN+P+GT V T +A DAD G+ K++YS+ + D+E
Sbjct: 2086 NVPKFPVLEYFEFVAENEPVGTSVFTARAVDAD-KGIFGKLNYSILSAATSTDSGSTDSE 2144
Query: 61 GPLNHFRI 68
G F++
Sbjct: 2145 GSWKLFKV 2152
>gi|10803408|emb|CAC13127.1| cadherin-7 [Homo sapiens]
Length = 784
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G N+++ Y + GDGLG F
Sbjct: 258 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-IGANAEMEYKIVDGDGLGIF------ 310
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
KI + +E I + K LD E A Y L + A +K PR
Sbjct: 311 ----------KISVDKETQEGIITIQKELDFE-AKTSYTLRIEAANKDADPR 351
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNEGP 62
PVFS +Y V E +G ++ T+ A DP NS + YS+ R D YF ID
Sbjct: 375 PVFSSPLYPMEVSEATQVGNIIGTVAA--HDPDSSNSPVRYSIDRNTDLERYFNIDANSG 432
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I K LDRE + +N+T+ A++ P +
Sbjct: 433 V--------------------ITTAKSLDRETNAI-HNITVLAMESQNPSQ 462
>gi|426386187|ref|XP_004059573.1| PREDICTED: cadherin-7 isoform 1 [Gorilla gorilla gorilla]
gi|426386189|ref|XP_004059574.1| PREDICTED: cadherin-7 isoform 2 [Gorilla gorilla gorilla]
Length = 785
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G N+++ Y + GDGLG F
Sbjct: 258 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-IGANAEMEYKIVDGDGLGIF------ 310
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
KI + +E I + K LD E A Y L + A +K PR
Sbjct: 311 ----------KISVDKETQEGIITIQKELDFE-AKTSYTLRIEAANKDADPR 351
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNEGP 62
PVFS +Y V E +G ++ T+ A DP NS + YS+ R D YF ID
Sbjct: 375 PVFSSPLYPMEVSEATQVGNIIGTVAA--HDPDSSNSPVRYSIDRNTDLERYFNIDANSG 432
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I K LDRE + +N+T+ A++ P +
Sbjct: 433 I--------------------ITTAKSLDRETNAI-HNITVLAMESQNPSQ 462
>gi|260784094|ref|XP_002587104.1| hypothetical protein BRAFLDRAFT_130106 [Branchiostoma floridae]
gi|229272241|gb|EEN43115.1| hypothetical protein BRAFLDRAFT_130106 [Branchiostoma floridae]
Length = 1854
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 21/113 (18%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP FS +Y ++E++ GT +ITL+A D D G NS+I Y++ G+ G FT+ +
Sbjct: 1053 APTFSQNIYTEYIQEDEVAGTSIITLQAVDRDSAGPNSQIEYTILAGNEAGVFTVGRDSG 1112
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ + P + PG ++ N+ VL A DKG+P R +
Sbjct: 1113 I-MTTLKPPGLAPG---QDINVTVL-----------------ASDKGSPIRSS 1144
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 51/115 (44%), Gaps = 20/115 (17%)
Query: 5 VFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLN 64
V D V TV E TLV+ L A D D G N +I Y + G F I N+G +
Sbjct: 620 VVEDMV-NTTVSEAAAADTLVVKLNATDEDS-GFNGRIDYRIASG-SKDKFYITNDGEI- 675
Query: 65 HFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
K+ PG + LDR++ GY L + A D+G P ++T AT
Sbjct: 676 -------KVSPGGRVP---------LDRDLYGDGYTLIVTATDRGNPDQKTGTAT 714
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 51/108 (47%), Gaps = 21/108 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y +V EN P GT V T+ A D D G ++I+YS++G G F ++N
Sbjct: 415 NSPVFNQSKYDLSVAENSPDGTAVGTITATDLD-SGEFAEIAYSLQGS-GSEKFAVNN-- 470
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
T + K E LDRE P Y LTL A D G
Sbjct: 471 --------LTGVITVAKGDE--------LDRETIPF-YFLTLLAEDGG 501
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 51/117 (43%), Gaps = 25/117 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS + ++E PIG L+ T+ A D D G N ++ +S+ G + L
Sbjct: 843 NAPKFSSDEIEQNIQEQLPIGQLLATITANDPD-KGPNGEVMFSLTGTNLLA-------- 893
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
ID T + I V +DRE N T+ A D G PP+ T K+
Sbjct: 894 -----------IDSSTGQ----IKVNSTIDREYGQW-LNFTVTAKDGGNPPKSTDKS 934
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
P+F + V E+ P+GT +IT+ A D D G+++ I YS G DG F+ID+
Sbjct: 188 PLFLGQPFSTQVNEDTPLGTSIITINARDGD-YGIDNPIVYSTEGDDGT--FSIDS 240
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 52/118 (44%), Gaps = 30/118 (25%)
Query: 2 NAPVFSDFVYQA-----TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT 56
NAP+F VY A TV EN+P+GT V+ + A D D N ++Y YF
Sbjct: 1158 NAPIF---VYPAANASTTVLENEPVGTFVVRVLATDED-EAQNGNVTY---------YFD 1204
Query: 57 IDNE--GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+E G +F + P N+ +LDRE Y L ++A D G PP
Sbjct: 1205 PSDEYNGDRANFTLDPIS---------GNLTTKVVLDRE-EKAQYVLYIQARDAGFPP 1252
>gi|326673313|ref|XP_003199834.1| PREDICTED: protocadherin alpha-2-like [Danio rerio]
Length = 784
Score = 52.0 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 41/120 (34%), Positives = 54/120 (45%), Gaps = 37/120 (30%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS +Y +++EN P+GT VI +KA D+D G NS+I YS+ G L
Sbjct: 234 NRPVFSKDIYSVSLQENSPVGTTVIKIKATDSD-EGSNSEIEYSL--GKTL--------- 281
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG---------YNLTLRAVDKGTPP 112
K+K Y+I L + EI G Y L + A DKG PP
Sbjct: 282 ----------------KRKVYDIFDLDHITGEIKVKGEVDFEDTDVYKLDVEASDKGQPP 325
>gi|74210196|dbj|BAE23328.1| unnamed protein product [Mus musculus]
Length = 785
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G+N+++ Y + GDGLG F
Sbjct: 258 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-IGVNAEMEYKIVDGDGLGIF------ 310
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
KI +E I + K LD E A Y L + A ++ PR
Sbjct: 311 ----------KISADKDTQEGIITIQKELDFE-AKTSYTLRIEAANRDADPR 351
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
>gi|27370290|ref|NP_766441.1| cadherin-7 precursor [Mus musculus]
gi|81913388|sp|Q8BM92.1|CADH7_MOUSE RecName: Full=Cadherin-7; Flags: Precursor
gi|26329695|dbj|BAC28586.1| unnamed protein product [Mus musculus]
Length = 785
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G+N+++ Y + GDGLG F
Sbjct: 258 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-IGVNAEMEYKIVDGDGLGIF------ 310
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
KI +E I + K LD E A Y L + A ++ PR
Sbjct: 311 ----------KISADKDTQEGIITIQKELDFE-AKTSYTLRIEAANRDADPR 351
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
>gi|23331158|gb|AAH36786.1| CDH7 protein [Homo sapiens]
Length = 630
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G N+++ Y + GDGLG F
Sbjct: 258 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-IGANAEMEYKIVDGDGLGIF------ 310
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
KI + +E I + K LD E A Y L + A +K PR
Sbjct: 311 ----------KISVDKETQEGIITIQKELDFE-AKTSYTLRIEAANKDADPR 351
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNEGP 62
PVFS +Y V E +G ++ T+ A DP NS + YS+ R D YF ID
Sbjct: 375 PVFSSPLYPMEVSEATQVGNIIGTVAA--HDPDSSNSPVRYSIDRNTDLERYFNIDANSG 432
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I K LDRE + +N+T+ A++ P +
Sbjct: 433 V--------------------ITTAKSLDRETNAI-HNITVLAMESQNPSQ 462
>gi|391338304|ref|XP_003743499.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-related tumor
suppressor-like [Metaseiulus occidentalis]
Length = 4957
Score = 52.0 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 23/113 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF Y A V+E+ P+ T V+++ A+D D G N +ISY++ GD F I G
Sbjct: 1945 NSPVFDPLSYTAEVREDAPLNTTVLSVHASDLD-SGPNGEISYTILEGDDDQQFRISENG 2003
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
RI+ T+ LDRE YNL + A D+ PR+
Sbjct: 2004 -----RIITTRA----------------LDRETRS-HYNLIVSAEDRAANPRQ 2034
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 48/108 (44%), Gaps = 20/108 (18%)
Query: 10 VYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIV 69
V ATV EN +V + D D G+N + S+ G+ + +F +DNE
Sbjct: 358 VTDATVDENAERNQVVAAISVVDGDD-GLNGETELSLSAGNDMKHFRLDNEQTF------ 410
Query: 70 PTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
Y + V +LDRE P YNLT A DKGTP R T K
Sbjct: 411 ------------YTVRVDGVLDREKVPW-YNLTFVATDKGTPSRSTIK 445
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 4/57 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP FS YQ +V EN+P+G ++T++A+D D G+N ++++S+ G F ID
Sbjct: 3097 NAPSFSSASYQISVAENEPVGNELLTIQASDPD-EGVNGQLAFSIEAN---GNFAID 3149
Score = 43.1 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 40/117 (34%), Positives = 53/117 (45%), Gaps = 19/117 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + TV+E T+V ++ A D D NSKISYS+ G + +
Sbjct: 1413 NAPVFPNGAIVRTVREGIASDTMVASVVATDRDLK-QNSKISYSLTG-------QVPHTE 1464
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
P HFRI K + I + +DRE Y LT+ A D G P + KA
Sbjct: 1465 PF-HFRI---------KAETGQIYTAREIDREFTDT-YKLTITATDHGEPALTSEKA 1510
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
N+PVF Y+A + EN P+ VI + A D D P G+ I YS+ GD F+ID
Sbjct: 2155 NSPVFEQRQYEAVMSENSPVEKSVIKVSATDFDVGPSGL---IRYSIVAGDPNHDFSIDE 2211
Query: 60 E 60
E
Sbjct: 2212 E 2212
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 21/112 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVFS +Y+ V E+ + V+T+ A D D N++ Y++ G+ FTID
Sbjct: 3408 DPPVFSKSLYEVKVPEDVDLDHYVVTVSATDRDVRPSNNQFVYAILDGNINRAFTID--- 3464
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P D T LDRE + YNLT+ A+D G P +
Sbjct: 3465 --------PNTGDLHTASN---------LDRE-SMSHYNLTVGAIDNGIPSQ 3498
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAPVF Y+ V EN P T + + A D+D G+N+ + Y+++ + G+F +D
Sbjct: 2368 NAPVFEKPFYEIHVSENLPADTFIAKITATDSD-QGLNALLRYTLK--EPSGWFELD 2421
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG--LGYFTIDN 59
N P+F Y ++ E+ P G V+ + A+DAD G N++ISYS+ + F+ID
Sbjct: 229 NPPIFDHSAYSVSMNESLPAGHRVLQVHASDAD-AGDNARISYSLAESNAKQANQFSID- 286
Query: 60 EGPLNHFRIVPTKID 74
H ++ T D
Sbjct: 287 ----QHTGVISTNFD 297
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVFS ++ + E+ P G + +++A DAD G N ++SYSV G F+++
Sbjct: 1840 NSPVFSHSMFSFDIPEDTPRGHKIGSVRATDAD-IGQNGQVSYSVLSDWGNDLFSLN 1895
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
+++ EN P+ T+++ +KA D D G NS I YS F+I GP++ V ++
Sbjct: 2062 SSIVENAPLNTIIMAVKAVDGD-EGRNSHIEYSF-ASRSESLFSI---GPVDGLLRVNSE 2116
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTL 103
+D K EY I+V+ DR PL T+
Sbjct: 2117 LDR-ELKSEYQIIVVA-KDRGKPPLSATTTI 2145
Score = 35.4 bits (80), Expect = 8.5, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 50/114 (43%), Gaps = 28/114 (24%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F+ ++ A V E+ IGT VI + + D+D G N+ +YS+ NE
Sbjct: 2781 NSPRFTR-LFSANVSEDATIGTFVIQMTSIDSD-IGQNAIATYSL------------NEN 2826
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD----KGTP 111
P F I P N+ V LDRE+ YNL + D K TP
Sbjct: 2827 PGGKFAIDPV---------SGNVTVAGSLDRELKD-EYNLKVTVFDGAWKKDTP 2870
>gi|322789053|gb|EFZ14511.1| hypothetical protein SINV_16551 [Solenopsis invicta]
Length = 1727
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 51/104 (49%), Gaps = 22/104 (21%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
ATV EN +V + D D G+N + S +R G+ LG HFR+ T+
Sbjct: 338 ATVDENTAKDAIVAAVAVID-DDEGLNGETSVEIRAGNELG-----------HFRLEVTE 385
Query: 73 IDPGTKKKEYNIV-VLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+NIV V LDRE P YNLT+ A DKGTPPR T
Sbjct: 386 --------SFNIVRVDGRLDREEIP-KYNLTVVATDKGTPPRST 420
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF Y A + E PIG+ V ++ A DAD G+N++I Y G+ G+F ID++
Sbjct: 434 HEPVFQQSEYSAVLSELAPIGSFVASISATDAD-SGLNARIYYEFGLGNEQGWFAIDSDT 492
Query: 62 PL 63
L
Sbjct: 493 GL 494
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 22/118 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ V E IGT ++ + D D G+N + YS+ G+ G+F ID
Sbjct: 1177 NVPQFQRLPYRMQVSEGAAIGTQLLRVYTTDVD-EGLNGDVFYSLEDGNQHGHFMID--- 1232
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I ++K LDRE++ Y LT+ A D G R + AT
Sbjct: 1233 -----------------EATGQISLVKELDREMSD-SYVLTVVAHDAGLETRLSSSAT 1272
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF Y+ ++ E+ P+ +L A DAD G N +I Y+V G+ G+F I +G
Sbjct: 964 HTPVFRLTSYEISLPESTPVNERFFSLTAQDAD-VGANGRILYTVTDGNTEGHFGIFPDG 1022
Query: 62 PL 63
L
Sbjct: 1023 QL 1024
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P F D + +V E PI T ++ KA D D G NS++++++ G+ F ID+
Sbjct: 1283 NVPRFVDNKLKISVLETTPINTELLHFKATDND-LGSNSELTFAISAGNKRDTFYIDS 1339
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+P+F + Y + E+ P+GT + + AADAD N+++ Y++ G G G F ++
Sbjct: 647 NSPIFYPWRYLMPISEDAPVGTTLGKVIAADADAR-ENAQVRYTLESG-GEGLFMVE 701
>gi|302565706|ref|NP_001180923.1| cadherin-7 precursor [Macaca mulatta]
gi|109122430|ref|XP_001094033.1| PREDICTED: cadherin-7-like isoform 2 [Macaca mulatta]
Length = 785
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G N+++ Y + GDGLG F
Sbjct: 258 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-IGANAEMEYRIVDGDGLGIF------ 310
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
KI + +E I + K LD E A Y L + A +K PR
Sbjct: 311 ----------KISVDKETQEGIITIQKELDFE-AKTSYTLRIEAANKDADPR 351
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
>gi|443732026|gb|ELU16918.1| hypothetical protein CAPTEDRAFT_222008 [Capitella teleta]
Length = 4878
Score = 52.0 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N P+F + Y +++EN +G +V T+ A+DAD G N++++YSV G+G YF ID E
Sbjct: 2966 NTPLFDEKSYSMSIEENWQVGRVVGTVTASDAD-IGANAELTYSVTSGNGTDYFVIDAET 3024
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
G ++ V +K++ KK + LT+ A D+G PR
Sbjct: 3025 GVISLSASVASKVN---KK-------------------FQLTVAASDRGAAPR 3055
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 54/111 (48%), Gaps = 24/111 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ + Q T+ EN +G+ + T+ A DAD G+N+++ YS+ GGDG
Sbjct: 1189 NPPVFAQSISQLTLYENTDVGSQIATVSANDAD-SGVNAELHYSILGGDG---------- 1237
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
IDP + N K +DRE Y LT+ A+D G PP
Sbjct: 1238 --------TFAIDPLLGQISLN----KGVDRETHD-SYRLTIMAMDNGEPP 1275
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 51/118 (43%), Gaps = 22/118 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F Y V EN IGT ++ + A D D GMN + YS+ GGD +F +D
Sbjct: 1922 NAPIFDPSTYSDQVWENATIGTQIMEVSATDVD-SGMNGWVRYSITGGDIDHHFEVDQAT 1980
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I V K LDRE YNL + A D+ R+ +T
Sbjct: 1981 GI--------------------ISVAKALDRETQG-HYNLAIEARDQSADTRDQLSST 2017
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 51/118 (43%), Gaps = 23/118 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS + +V E + V+ + A DAD G N++I+Y++ G+ G F ID
Sbjct: 2650 NAPVFSQHFFNTSVAEGEYGSLNVLQVTAVDAD-TGDNARITYALEAGNEAGMFVID--- 2705
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
K I LDRE Y L + A D G PR+T AT
Sbjct: 2706 -----------------KTSGGIRTQMRLDRETVD-AYQLVVTATDHGN-PRQTSTAT 2744
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N P F + +Y+ +V+EN P GT+V L A DAD P N I YS+ G D
Sbjct: 3178 NGPQFDEAIYRTSVEENSPRGTVVFVLTAHDADDPP-NDLIKYSMMGDD 3225
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 2 NAPVF--SDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP F SD YQ +V E++ IG+ + + A D D G N +ISY++ G+ LG F ID
Sbjct: 3071 NAPRFTGSDQAYQTSVPESRLIGSTIGKVTATDNDS-GPNGEISYAIANGNDLGLFVID 3128
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF Y +E+ P+G+ V ++ A D D G+N+ I+Y + G+ LG+F I G
Sbjct: 460 PVFQKVSYSKEFREDLPLGSFVASVTATDND-TGINAAITYEITSGNDLGWFEI---GSN 515
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYN 100
I +D +++ + V L +L R+ A + Y+
Sbjct: 516 TGLVITAKPLD----REQTSRVQLTILARDGAVMSYS 548
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 7/86 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N+P + Y ATV E+ PIG+ ++ + A DAD G+N+ + Y+V GD F +D+
Sbjct: 2131 NSPEVNPQTYSATVDEDIPIGSRLLEIYATDAD-VGLNADLRYTVISGDPNRDFLLDSHT 2189
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVV 86
G L+ V ++D +K Y++VV
Sbjct: 2190 GELS----VQKRLDY-ERKTRYDLVV 2210
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 21/112 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F+ VY+ +++E+ +GT V+ + A D D YS+ G+ F++ N+G
Sbjct: 3389 DPPQFTQSVYEGSIREDARVGTTVLKVSAVDNDLQNSFRSFRYSITTGNHGEMFSV-NQG 3447
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ LDRE YNLT+ AVD G+PP+
Sbjct: 3448 -------------------SGWVTTNARLDREKHGT-YNLTVAAVDTGSPPQ 3479
Score = 38.9 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F Y+ +V E + + + + A D+D G+N ++Y + GG+ F I +G
Sbjct: 976 HTPAFDLKSYEVSVSEAEEVNSRFFDVTAVDSDI-GLNGHVTYEIVGGNKERKFGIFPDG 1034
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
L + + LDRE L Y LT+RA D G+P R +
Sbjct: 1035 AL---------------------YITQPLDREAVSL-YVLTIRARDMGSPQRSS 1066
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 16/103 (15%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
ATV+E G VI L + G+N + ++ G+ LG+F +++ + F ++
Sbjct: 358 ATVEEGAKEGETVIALVSVTDLDEGVNGQTEATITKGNELGHFVLESSAVIPGFNLLK-- 415
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
V LDRE YN+T++A D G PPR +
Sbjct: 416 -------------VAGKLDREKVSR-YNITVQARDFGNPPRTS 444
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 23/111 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y A V ENQ T V+ + A D D G N+ I YS++ D G F ID
Sbjct: 2341 NKPRFEHDQYSAEVMENQAAMTTVVKVTATDRD-TGKNADIKYSLQ-NDASGRFGIDQ-- 2396
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ + + ++ L +R++ YNL A D G+ P
Sbjct: 2397 ---------------SSGEVFTLMSLNREERDV----YNLVAVATDSGSLP 2428
>gi|426370122|ref|XP_004052021.1| PREDICTED: protocadherin Fat 3-like [Gorilla gorilla gorilla]
Length = 3470
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 1833 NAPVFAQEVYRGNVKESDPPGEVVAVLSTWDRDTSDVNRQVSYHITGGNPRGRFAL---- 1888
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 1889 --------------GLVQSEWKVYVKRPLDREEQDI-YFLNITATD 1919
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS VY A + E+ +G VI L A D D N +I +S+ GD FT+D
Sbjct: 2250 NPPKFSQDVYSAVISEDALVGDSVILLIAEDVDSQP-NGQIHFSIVNGDRDNEFTVDPVL 2308
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L + V K LDRE GY+L ++A+D G P
Sbjct: 2309 GL--------------------VKVKKKLDRERVS-GYSLLVQALDSGIP 2337
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI ++A D D PG +ISY++ F ID+ G
Sbjct: 1406 SPAFSQSTYVAEVRENVAAGTKVIHVRATDGD-PGTYGQISYAIINDFAKDRFLIDSNGQ 1464
Query: 63 L 63
+
Sbjct: 1465 V 1465
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D S+S+ G+ F +D G
Sbjct: 2355 NSPVFTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPPFSFSILSGNEEEEFVLDPHG 2414
Query: 62 PL 63
L
Sbjct: 2415 IL 2416
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 17/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ S+ +Y V EN P VI ++A D D N K++Y + G+ +F I
Sbjct: 57 NAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSS-NEKLTYRITSGNPQNFFAINIKT 115
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNI-VVLKLLDR 92
D E HF V T D G K+ I VV+++LD
Sbjct: 116 GLITTTSRKLDREQQAEHFLEV-TVTDGGPAPKQSTIWVVVQVLDE 160
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D++
Sbjct: 1303 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYSILSGNDRTSFLMDSKS 1361
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ GT V+ + A D G N++I+Y +R G+ G F
Sbjct: 2145 NPPVFERRDYLVTVPEDTSPGTQVLAVFATSKDI-GTNAEITYLIRSGNEQGKF------ 2197
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
KI+P T I V ++LD E+ Y L + A D GTP
Sbjct: 2198 ----------KINPKTG----GISVSEVLDYELCKRFY-LVVEAKDGGTP 2232
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y A + E+ P +++ + A DAD G N I YS+ G +F
Sbjct: 1938 NSPVCDQVAYTALLPEDIPSNKIILKVSAKDAD-IGSNGDIRYSLYGSGNSEFF------ 1990
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+DP + + + L LLDRE P+ Y+L +A D G
Sbjct: 1991 -----------LDPESGE----LKTLALLDRERIPV-YSLMAKATDGG 2022
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 25/120 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVF Y A V+ + GTL+ + A D D G N +++Y ++ D G+F I+ N
Sbjct: 993 NSPVFVGLPYYAAVQVDAEPGTLIYQVTAIDKD-KGPNGEVTYVLQ--DDYGHFEINPNS 1049
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
G N+++ + + +++ + Y +T+ A D G P T P
Sbjct: 1050 G---------------------NVILKEAFNSDLSNIEYGVTILAKDGGKPSLSTSVELP 1088
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG----LGYFTI 57
N PVF Y + E P+GT + ++A D D G N +++YS+ + F I
Sbjct: 1723 NKPVFETSSYDTIIMEGMPVGTKLTQVRAIDMD-WGANGQVTYSLHSDSQPEKVMEAFNI 1781
Query: 58 D-NEGPLNHFRIVPTKIDP 75
D N G ++ + + + DP
Sbjct: 1782 DSNTGWISTLKDLDHETDP 1800
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F++ +Y+A+V E+ +G+ V+ + A D D G N+++ Y++ G N G
Sbjct: 475 HSPYFTNPLYEASVFESAALGSAVLQVTALDKD-KGENAELIYTIEAG---------NTG 524
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F+I P + T KE ++ + + L+++ D+G+PP
Sbjct: 525 --NTFKIEPV-LGIITICKEPDMTTMG---------QFVLSIKVTDQGSPP 563
>gi|355755091|gb|EHH58958.1| Cadherin-7 [Macaca fascicularis]
gi|380787901|gb|AFE65826.1| cadherin-7 preproprotein [Macaca mulatta]
Length = 785
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G N+++ Y + GDGLG F
Sbjct: 258 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-IGANAEMEYRIVDGDGLGIF------ 310
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
KI + +E I + K LD E A Y L + A +K PR
Sbjct: 311 ----------KISVDKETQEGIITIQKELDFE-AKTSYTLRIEAANKDADPR 351
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
>gi|444721941|gb|ELW62648.1| Protocadherin Fat 4 [Tupaia chinensis]
Length = 2618
Score = 52.0 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVFS +Y + E P+GT V + A D+D S+ SY + G+ G F+
Sbjct: 1073 DPPVFSLSIYSVQISEGVPVGTHVTFVSAFDSDSVPSWSRFSYFIGSGNENGAFS----- 1127
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I V LDRE P+ YNLT+ AVD GTP
Sbjct: 1128 -----------INPQTGQ----ITVTAELDRETLPI-YNLTVLAVDSGTP 1161
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ +Y T+ E+ P GT V+ + A+DAD N+ ISYS+ GG+ FT
Sbjct: 31 NVPTFASKMYFTTIPEDAPTGTDVLLVNASDAD-ASTNAVISYSIMGGN--AQFT----- 82
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I+ LLDRE Y L + + D G+P
Sbjct: 83 -----------INPSTGQ----IITSALLDRETKD-NYTLVVVSSDAGSP 116
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF Y TV EN P GT VI L A DAD G N+ I+Y+V+ D F ID
Sbjct: 863 NSPVFLPDEYFPTVLENAPSGTTVINLNATDAD-SGTNAVIAYTVQSSDS-DLFVID 917
Score = 43.1 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAP FS Y V +N +GT +I + A D G+NS++ Y + D LG F +DN
Sbjct: 652 NAPQFSQVKYFTPVTKNVKVGTKLIKVTAIDDKDFGLNSEVEYFLSSEDHLGKFKLDN 709
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD-PPGMNSKISYSVRGGDGLGYFTIDNE 60
N PV + + + V EN+ GTLV+TL++ D D PP Y + G YF+++
Sbjct: 1179 NGPVLT--ISEGEVMENKRPGTLVMTLQSTDPDLPPNQGPFTYYLLSTGPATNYFSLNTA 1236
Query: 61 GPLNHFR 67
G L+ R
Sbjct: 1237 GVLSTTR 1243
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
+ P FS AT+ E+ IG +V T+ A D D MN I YS+ G+ G F I++
Sbjct: 758 HTPEFSQSHMSATIPESHSIGAIVRTVSARDRD-AAMNGLIRYSISSGNEDGIFAINS 814
>gi|383861450|ref|XP_003706199.1| PREDICTED: protein dachsous-like [Megachile rotundata]
Length = 2659
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 53/110 (48%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y ATV E G V+ L A+DAD GMNS+I Y + G+
Sbjct: 1511 NPPVFTQTQYSATVLEGNVKGDFVVKLSASDAD-QGMNSRILYHIVDGN----------- 1558
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P N F I P P + NIV LDREI Y LT+ A D+G P
Sbjct: 1559 PDNAFTISP----PYSGIVRTNIV----LDREIRE-KYRLTIIATDQGNP 1599
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 25/108 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTIDNEGPLNHFRIVP 70
+V+E QP GT V ++A D D G N+ ++Y++ R DG FTID P+ ++
Sbjct: 502 SVREEQPPGTEVARVRALDTDL-GENASVTYTILKDRDSDGYNVFTID---PITG--MIR 555
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
TK VL +R + Y ++++A D G PPR + +A
Sbjct: 556 TK------------AVLDHEERNV----YRVSVKATDAGRPPRHSIRA 587
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 13/108 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F Y V EN+PIGT V + +A+D D G+ ++YS+ G+ ID+
Sbjct: 2028 NSPKFPVSEYLEFVGENEPIGTTVFSARASDLD-RGIFGSLNYSIVSAAATGFSDIDDSW 2086
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
L F + K + + D E+ Y TLRA D G
Sbjct: 2087 KL--FAV---------DGKSGTVTTRAIFDYELRNR-YAFTLRATDTG 2122
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 6 FSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNH 65
F + Y+ V+EN GT V+ + A +D G +SYS G+ G F+ID + L
Sbjct: 1373 FQNETYEVVVQENSAAGTEVLQVTAVRSD--GRRQHVSYSFGSGNDFGTFSIDEDTGL-- 1428
Query: 66 FRIV-PTKID 74
R+ PT++D
Sbjct: 1429 LRVNDPTRLD 1438
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMN-SKISYSVRGGDGLGYFTID-N 59
N P F + ++Q +KEN GT V TL+A D D G + + Y + G+ G F ++ +
Sbjct: 1919 NYPRFLEELHQVFIKENAARGTTVATLRAKDDDLAGSEAANLVYEITSGNDGGLFRVEKS 1978
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLR 104
G + +V +D + +N+VV+ I+PL LR
Sbjct: 1979 TGAV----LVNATLDCDLEPDVHNLVVMACDSDPISPLCALARLR 2019
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 50/112 (44%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y + EN P GTLV ++ A+D D G N+ + Y+V + FT
Sbjct: 386 NDPRFEKDFYGFELLENLPSGTLVGSVSASDPD-LGKNALLRYAVVQAN--SSFT----- 437
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+DP T + I + LDRE + + L L A D+GTP R
Sbjct: 438 -----------VDPDTGE----ITTREPLDRETKGV-HELVLEARDQGTPSR 473
>gi|326927331|ref|XP_003209846.1| PREDICTED: neural-cadherin-like [Meleagris gallopavo]
Length = 2531
Score = 52.0 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 25/112 (22%)
Query: 2 NAPVF-SDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG-GDGLGYFTIDN 59
++PVF S + + V EN P+GT V T++A D D G+N I YS++ D + F ID
Sbjct: 1282 HSPVFHSQLIQTSPVFENMPVGTTVTTVRATDKD-SGLNGNIIYSIKSDSDPMRQFVIDQ 1340
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
G +++V LDRE+ Y+L ++A D+GTP
Sbjct: 1341 HG---------------------HVIVANKLDREVIQ-KYSLIVQASDQGTP 1370
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N PVF+ VY+ V E+Q +G+ VIT+ A D D G N+K+ Y + G+ G + E
Sbjct: 852 NKPVFTQSVYEVNVDEDQDVGSTVITVNANDED-EGTNAKLRYQITAGNTGGVLGVQPE 909
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 53/114 (46%), Gaps = 24/114 (21%)
Query: 2 NAPVFSDFVY---QATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVF Y A+V ENQP+GT V+ ++A DAD G N + Y + DG+
Sbjct: 416 NKPVFQKCHYYREHASVLENQPLGTAVLQVEATDAD-EGANGIVKYGLMHRDGV------ 468
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L FRI P D G + +++ DRE Y +T+ A D+ P
Sbjct: 469 ----LPAFRIHP---DTGV------LTTVQVFDRE-KQREYPVTVTATDQAAEP 508
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N P F+ +Y+A+V E IGT VI + A D D G N +I+YS+
Sbjct: 737 NVPFFTSSIYEASVTEGADIGTFVIQVSATDLD-LGQNGEITYSM 780
Score = 38.5 bits (88), Expect = 0.97, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP FS +Y++ V E+ TLV T+ A D D G ++Y + G+ G F +D +
Sbjct: 310 APEFSQTIYRSFVSEDAGPNTLVATVNAVDPDGDG----VTYDIPSGNQKGNFIVDPKKG 365
Query: 63 LNHFRIVPTKIDPGTK 78
L R P GT+
Sbjct: 366 LVRLRSSPFPKLQGTE 381
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+ P F+ ++QA + EN I + ++ + A DAD G N+ +++S+ GD F I+N+
Sbjct: 1174 HVPNFTKEMWQAAIPENSAINSEILRVSATDAD-GGENAHLTFSIIRGDPDQKFYIEND 1231
>gi|156383976|ref|XP_001633108.1| predicted protein [Nematostella vectensis]
gi|156220173|gb|EDO41045.1| predicted protein [Nematostella vectensis]
Length = 4639
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 22/115 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+F + +V E + +GT+ +T+ A D D G NS ++YS+ G+ G+F+I+N
Sbjct: 669 PLFQSPSFNVSVNEIERLGTVFLTVSATDGDA-GANSALTYSIAAGNEEGFFSINN---- 723
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
K I V K LDRE Y LT+ A D G PP + A
Sbjct: 724 ----------------KTGAISVAKQLDRETRDQ-YTLTVMAQDGGEPPLNSTTA 761
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 22/115 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+F + +V E + +GT+ +T+ A D D G NS ++YS+ G+ G+F+I+N
Sbjct: 1214 PLFQSPSFNVSVNEIERLGTVFLTVSATDGDA-GANSALTYSIAAGNEEGFFSINN---- 1268
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
K I V K LDRE Y LT+ A D G PP + A
Sbjct: 1269 ----------------KTGAISVAKQLDRETRDQ-YTLTVMAQDGGEPPLNSTTA 1306
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 22/115 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+F + +V E + +GT+ +T+ A D D G NS ++YS+ G+ G+F+I+N
Sbjct: 1517 PLFQSPSFNVSVNEIERLGTVFLTVSATDGDA-GANSALTYSIAAGNEEGFFSINN---- 1571
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
K I V K LDRE Y LT+ A D G PP + A
Sbjct: 1572 ----------------KTGAISVAKQLDRETRDQ-YTLTVMAQDGGEPPLNSTTA 1609
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 22/115 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+F + +V E + +GT+ +T+ A D D G NS ++YS+ G+ G+F+I+N
Sbjct: 1993 PLFQSPSFNVSVNEIERLGTVFLTVSATDGDA-GANSALTYSIAAGNEEGFFSINN---- 2047
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
K I V K LDRE Y LT+ A D G PP + A
Sbjct: 2048 ----------------KTGAISVAKQLDRETRDQ-YTLTVMAQDGGEPPLNSTTA 2085
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 22/115 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+F + +V E + +GT+ +T+ A D D G NS ++YS+ G+ G+F+I+N
Sbjct: 3852 PLFQSPSFNVSVNEIERLGTVFLTVSATDGDA-GANSALTYSIAAGNEEGFFSINN---- 3906
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
K I V K LDRE Y LT+ A D G PP + A
Sbjct: 3907 ----------------KTGAISVAKQLDRETRDQ-YTLTVMAQDGGEPPLNSTTA 3944
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 22/117 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F + +V E + +GT+ +T+ A D+D G NS ++YS+ G+ G F+I+N
Sbjct: 4155 PSFQSPSFNVSVNEIERLGTVFLTVSATDSDA-GANSALTYSIAAGNEEGVFSINN---- 4209
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
K I V K LDRE L Y LT+ A D G P A P
Sbjct: 4210 ----------------KTAAISVAKQLDRETRDL-YMLTVMAQDGGEPSLNRTAAVP 4249
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 22/115 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+F + +V E + +GT+ +T+ A D D G NS ++YS+ G+ G+F+I+N
Sbjct: 911 PLFQSPSFNVSVNEIERLGTVFLTVSATDGDA-GANSALTYSIAVGNEEGFFSINN---- 965
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
K I V K LDRE Y LT+ A D G PP + A
Sbjct: 966 ----------------KTGAISVAKQLDRETRDQ-YTLTVMAQDGGEPPLNSTTA 1003
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 22/115 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+F + +V E + +GT+ +T+ A D D G NS ++YS+ G+ G+F+I+N
Sbjct: 2991 PLFQSPSFNVSVNEIERLGTVFLTVSATDGDA-GANSALTYSIAVGNEEGFFSINN---- 3045
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
K I V K LDRE Y LT+ A D G PP + A
Sbjct: 3046 ----------------KTGAISVAKQLDRETRDQ-YTLTVMAQDGGEPPLNSTTA 3083
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 22/115 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+F + +V E + +GT+ +T+ A D D G NS ++YS+ G+ G+F+I+N
Sbjct: 3549 PLFQSPSFNVSVNEIERLGTVFLTVSATDGDA-GANSALTYSIAVGNEEGFFSINN---- 3603
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
K I V K LDRE Y LT+ A D G PP + A
Sbjct: 3604 ----------------KTGAISVAKQLDRETRDQ-YTLTVMAQDGGEPPLNSTTA 3641
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 47/109 (43%), Gaps = 21/109 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F + + EN+PIG V TL A DAD N+ I++ + G+ F+ID
Sbjct: 268 NAPAFQNTPLTVSCSENRPIGLTVATLTATDADAT-TNAIITFVIVSGNEGEAFSID--- 323
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGT 110
K +I + K LD E P Y L + A++ T
Sbjct: 324 -----------------KVTGDITISKPLDYENGPRVYTLNISAMNNHT 355
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 21/109 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F + + EN+PIG V TL A DAD N+ I++ + G+ F+ID
Sbjct: 2518 NAPAFQNTPLTVSCSENRPIGLTVATLTATDADAT-TNAIITFVIVSGNEGEAFSID--- 2573
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGT 110
K +I + K LD + P Y L + A++ T
Sbjct: 2574 -----------------KVTGDITISKPLDYDKGPRVYTLNISAMNNHT 2605
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N PV D V Q ++ E I T V T+ A+D D G N ++ YS+ G LG+F I
Sbjct: 3094 NPPVIQDAVIQVSLSETAEIDTPVATVIASDKD-IGANGRLMYSIESG-ALGHFQI 3147
>gi|402903308|ref|XP_003914513.1| PREDICTED: cadherin-7 [Papio anubis]
Length = 809
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G N+++ Y + GDGLG F
Sbjct: 258 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-IGANAEMEYRIVDGDGLGIF------ 310
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
KI + +E I + K LD E A Y L + A +K PR
Sbjct: 311 ----------KISVDKETQEGIITIQKELDFE-AKTSYTLRIEAANKDADPR 351
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
>gi|326673395|ref|XP_002664335.2| PREDICTED: protocadherin beta-16-like [Danio rerio]
Length = 804
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
NAPVFS VY+ V EN P GT+V T+ A+D D G+N +I+YS+R
Sbjct: 233 NAPVFSQTVYKTAVTENSPKGTIVTTVSASDLD-QGVNGEITYSIR 277
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVF YQA+V+EN G + T++A DAD N+++SY
Sbjct: 443 NAPVFEQSSYQASVQENNTPGLSIFTVRARDAD-FNQNARVSY 484
>gi|156351334|ref|XP_001622464.1| predicted protein [Nematostella vectensis]
gi|156209012|gb|EDO30364.1| predicted protein [Nematostella vectensis]
Length = 2058
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 58/115 (50%), Gaps = 27/115 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF++ Y A V+ENQP GT V+ + A+D D G N+K+SY + G
Sbjct: 1395 NSPVFNNTDYYAYVRENQPAGTPVLVVTASDKD-VGTNAKLSYVLSG------------- 1440
Query: 62 PLNHFRIVPTK--IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
++ T+ IDP T NI + L+RE Y LTLRAVD RE
Sbjct: 1441 ------VLYTRFAIDPDTG----NITTREPLNRE-ETGSYTLTLRAVDSAIRARE 1484
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y + + EN P GT+V + A D D G N ++S+++ GD G+F+I+ G
Sbjct: 490 NDPEFTGMPYTSDIAENLPAGTIVFQVTATDKD-SGENGRLSFNISAGDDGGHFSINGSG 548
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ T +E LDRE Y LT+ A D G R +
Sbjct: 549 LV-------------TTARE--------LDRETIAT-YTLTVSAYDHGVSSRHKH 581
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 23/116 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y A V EN P GT V+ + A+D D G N KI+Y + G+ F+I+N
Sbjct: 916 NDPVFNQSKYAADVLENSPTGTPVLRVHASDRD-QGANGKITYKLTNGNKDDAFSINNVT 974
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP-PRETY 116
I V ++DRE A + LT++A D+G P R+T+
Sbjct: 975 G--------------------EITVAGVIDRE-AVHTFVLTVQAEDQGEPSSRKTF 1009
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS VY T++E+ + T V+ + A D D G N + +Y + GD F ID
Sbjct: 1604 NKPLFSKSVYNVTLRESVFLKTQVVQVIATDPD-EGANGQFTYKITAGDTDDVFYIDANT 1662
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L I + LD E L YNLT+ A D GTPP
Sbjct: 1663 GL--------------------ITIKAKLDYEKTSL-YNLTVSAQDLGTPP 1692
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
P F Y ++EN PIG+ V+T++A D D G+N+ I Y + G+ G FTID+
Sbjct: 151 PRFLQSFYLKEIEENTPIGSTVVTVEARDGD-VGINNPILYEIISGNSDGVFTIDS 205
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVF++ Y A + EN +GT ++ + A DAD G NS++ Y
Sbjct: 42 NAPVFTEQPYMAKIAENARVGTTILKISAIDAD-SGTNSQVQY 83
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
P F+ + EN IGT V + A D D + ISYS+ GD G FTIDN
Sbjct: 1190 PYFNSSSLTVKLSENASIGTNVTKITALDKD---IGDTISYSIANGDPYGLFTIDN 1242
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 49/114 (42%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y E P GT ++ +KA DAD G N+ + YS+ ++N
Sbjct: 1290 NPPVFSMPGYTIEYWEESPEGTSILQVKAIDAD-IGDNAAVLYSI----------VENVT 1338
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I G+ + LDRE+ +N T+RA D G P + +
Sbjct: 1339 DYVTVNAITGVISLGSSQ----------LDREVEEY-FNFTIRATDSGVPSKSS 1381
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
NAPVF Y A + EN G VIT+ A D D + ++ Y + G+ F I
Sbjct: 1709 NAPVFHKPRYSAELYENVTRGHHVITVNATDIDAEASHKRVYYRIESGNTDSMFLI 1764
>gi|326673393|ref|XP_003199872.1| PREDICTED: protocadherin beta-16-like [Danio rerio]
Length = 800
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAPVF VY+ATV EN P T+V T+ A DAD G+NSKI YS+
Sbjct: 228 NAPVFMQSVYKATVTENAPKDTIVSTVSATDAD-EGINSKIEYSI 271
Score = 40.0 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVF YQA+V+EN G + T++A DAD N+++SY
Sbjct: 438 NAPVFEQSSYQASVQENNTPGLSIFTVRARDAD-FNQNARVSY 479
>gi|312377967|gb|EFR24666.1| hypothetical protein AND_10582 [Anopheles darlingi]
Length = 3660
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 54/112 (48%), Gaps = 25/112 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS Y T+ E+ +GTLV + A DAD G+N KI YS +
Sbjct: 1954 NPPDFSMNPYSVTLPEDAEVGTLVTKIHATDAD-IGINRKIKYSFL------------DS 2000
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVL-KLLDREIAPLGYNLTLRAVDKGTPP 112
+HFRI P E IV L K LDRE+ + YNL++ A D G PP
Sbjct: 2001 YRDHFRIAP----------ESGIVTLAKPLDRELKAV-YNLSVSATDLGNPP 2041
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 48/109 (44%), Gaps = 22/109 (20%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F Y A V ENQ G LV T+KA D D G +++YS+ D +F ID
Sbjct: 1330 LHHPEFEHQSYDAKVNENQLAGRLVTTVKATDKD-FGEYGRVAYSIISDDMQEHFAID-- 1386
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
K+ +V K LDRE A Y + + AVD G
Sbjct: 1387 ------------------KERGELVTKKKLDRE-ARAAYEVPIMAVDAG 1416
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y A+V E IG+ ++ + A D G+N++ISYS+ GG+ F I+N
Sbjct: 2058 NPPEFTSKHYFASVPEINSIGSEILKVLATSKDT-GINAEISYSIIGGNEHRKFAINNRT 2116
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ + + LD E A Y LT++AVD GTPP
Sbjct: 2117 GV--------------------LSLADTLDYERAR-DYFLTIQAVDGGTPP 2146
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
+AP F+ + Q V E P+GT V + A D D G N++I+YS+ G+ FTID
Sbjct: 319 HAPEFTTKIVQGKVFETAPVGTRVAQVYAIDRD-IGENARITYSIGSGNIGNVFTID 374
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y A ++E+ G ++ ++A D D N ++SY++ GD + F
Sbjct: 2163 NHPQFTQNSYNARIREDAQRGDRILQVRANDLDAE-ENGRVSYTIERGDRMEQFA----- 2216
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
I+P T I V LDRE + Y L ++A D G P Y
Sbjct: 2217 -----------IEPDTGY----ISVAGTLDRE-SISNYVLEVQARDHGVPTLTAY 2255
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF + Y+ATV E+ GT+V+ + D D + + + Y + GD L F I + G +
Sbjct: 1751 PVFRETQYKATVNEDALPGTVVLQISTTDRD-VDLKTPVEYYIISGDALSQFQIKSTGEV 1809
>gi|432866007|ref|XP_004070658.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3-like
[Oryzias latipes]
Length = 3810
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/116 (36%), Positives = 55/116 (47%), Gaps = 25/116 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
N+P F YQ TV E+ P T V+ + A D D N ++ Y+ + G DG G FTI+
Sbjct: 1433 NSPQFLSPRYQGTVSEDAPPFTSVLQISATDRDAHA-NGRVQYTFQNGEDGDGDFTIE-- 1489
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIV-VLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
PT IV ++ LDRE P Y LT AVD+G PP+ T
Sbjct: 1490 ---------PTS----------GIVRTVRRLDRESVPF-YELTAYAVDRGVPPQRT 1525
Score = 42.7 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 19/108 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P FS + YQ V ENQP T VI + A D D PG ++SYS+ + N
Sbjct: 801 PHFSLYNYQVQVAENQPSSTSVIIMSATDPD-PGDPGRMSYSMA--------PLMNSRSS 851
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
++F+I P + G I ++LDRE L ++ + A D G+P
Sbjct: 852 DYFQIHP---NTGL------ITTTQMLDREHMDL-HHFRVTATDHGSP 889
Score = 40.0 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 49/110 (44%), Gaps = 24/110 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF Y +V E+QP G+ V+ + A D D G N++I+ YF DN +
Sbjct: 1332 PVFQSAHYSVSVNEDQPPGSTVVVISATD-DDVGENARIT----------YFLEDN---I 1377
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
FR IDP T I + LD E + Y L + A D G P +
Sbjct: 1378 PQFR-----IDPATGA----ITLQAELDYE-DQMTYTLAITAKDNGIPQK 1417
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAPVF ++ VKEN +G++V + A D D G N++I Y + G+ F +D
Sbjct: 1539 NAPVFPADDFEVLVKENSAVGSVVSQITATDPD-EGANAQIMYQIVEGNIPEIFQMD 1594
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y + E+ +GT V+T+ A D D +NS ++Y + GG+ F I G
Sbjct: 1228 NRPEFLQKEYYGRLNEDAAVGTSVVTVTAVDRD---VNSAVTYQITGGNTRNRFAISTAG 1284
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F +QA+V E+ P+G+ ++ ++A D D G N+++ Y + G F I++
Sbjct: 1123 NPPIFVSTPFQASVLESAPVGSSILHIQAIDTD-SGDNARLEYRLTGTGSDTPFIINSAT 1181
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ V +LDRE Y + A D G PP
Sbjct: 1182 GW--------------------VTVSSILDRESVE-HYFFGVEARDYGMPP 1211
>gi|395830699|ref|XP_003788456.1| PREDICTED: cadherin-7 [Otolemur garnettii]
Length = 869
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G N+++ Y + GDGLG F I
Sbjct: 342 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-IGANAEMEYKIVDGDGLGIFKI---- 396
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+D T +E I + K LD E A Y L + A +K PR
Sbjct: 397 ----------SVDKDT--QEGIITIQKELDFE-AKTSYTLRIEAANKDADPR 435
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 233 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 289
Score = 35.0 bits (79), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNEGP 62
PVFS +Y V E +G ++ T+ A DP NS + YS+ R D YF ID
Sbjct: 459 PVFSSPLYPMEVSEATQVGNIIGTVAA--HDPDSSNSPVRYSIDRNTDLERYFNIDANSG 516
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I K LDRE + +N+T+ A++ P +
Sbjct: 517 V--------------------ITTAKSLDRETNAI-HNITVLAMESQNPSQ 546
>gi|344239133|gb|EGV95236.1| Cadherin-7 [Cricetulus griseus]
Length = 719
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G+N+++ Y + GDGLG F
Sbjct: 192 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-IGVNAEMEYKIVDGDGLGIF------ 244
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
KI +E I + K LD E A Y L + A ++ PR
Sbjct: 245 ----------KISADKDTQEGIITIQKELDFE-AKTSYTLRIEAANRDADPR 285
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 83 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 139
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNEGP 62
PVFS +Y V E +G ++ T+ A DP NS + YS+ R D YF ID
Sbjct: 309 PVFSSPLYPMEVSEATQVGNIIGTVAA--HDPDSSNSPVRYSIDRNTDLERYFNIDANSG 366
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I K LDRE + +N+T+ A++ P +
Sbjct: 367 V--------------------ITTAKSLDRETNAV-HNITVLAMESQNPSQ 396
>gi|281337853|gb|EFB13437.1| hypothetical protein PANDA_009560 [Ailuropoda melanoleuca]
Length = 3367
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 1698 NAPVFAHEVYRGNVKESDPPGEVVAVLSTWDRDTSDVNRQVSYHITGGNPRGRFAL---- 1753
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 1754 --------------GLVQSEWKVYVKRPLDREEQDI-YFLNITATD 1784
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 25/109 (22%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI ++A D D PG +ISY++ F ID+ G
Sbjct: 1271 SPAFSQSTYVAEVRENTAAGTKVIHVRATDGD-PGTYGQISYTIINDFAKDRFLIDSNG- 1328
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLT--LRAVDKG 109
++ + LDRE PL +++ LRA+D G
Sbjct: 1329 --------------------QVITTERLDRE-NPLEGDISIFLRALDGG 1356
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS Y A + E+ +G VI + A DAD N +I +S+ GD DNE
Sbjct: 2115 NPPRFSQDTYSAVISEDALVGDSVILVVAEDADSQP-NGQIRFSIVNGDR------DNE- 2166
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
F + P KKK LDRE GY+L ++AVD G P
Sbjct: 2167 ----FAVEPVLGLVKVKKK---------LDRERVS-GYSLLVQAVDSGIP 2202
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D S+S+ G+ F +D G
Sbjct: 2220 NSPVFTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPPFSFSILSGNEEEEFVLDPHG 2279
Query: 62 PL 63
L
Sbjct: 2280 IL 2281
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D++
Sbjct: 1168 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYSILSGNDRTSFLMDSKS 1226
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ GT V+ + A D G N++I+Y +R G+ G F
Sbjct: 2010 NPPVFERRDYLVTVPEDTSPGTQVLAVFATSKDI-GTNAEITYLIRSGNEQGRF------ 2062
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+I+P T I V ++LD E+ + L + A D GTP
Sbjct: 2063 ----------RINPKTG----GISVSEVLDYELCK-KFFLVVEAKDGGTP 2097
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y A E+ +++ + A DAD G N I YS+ G +F
Sbjct: 1803 NSPVCEQVAYTALFPEDISSNKIILKVSAKDAD-IGSNGDIRYSLYGSGNDEFF------ 1855
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+DP + + + L LLDRE P+ Y+L RA D G
Sbjct: 1856 -----------LDPESGE----LKTLALLDRERVPM-YSLIARATDGG 1887
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 25/120 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVF Y A V+ + GTL+ + A D D G N +++Y ++ D G+F I+ N
Sbjct: 858 NSPVFVGLPYYAAVQVDAEPGTLIYQVTAIDKD-KGANGEVTYILQ--DDYGHFEINPNS 914
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
G N+++ + + +++ + Y +T+ A D G P T P
Sbjct: 915 G---------------------NVILKEAFNSDLSNIEYGVTVLAKDGGKPSLSTSVELP 953
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG----LGYFTI 57
N PVF Y+ + E P+GT + ++A D D G N +++YS+ + F I
Sbjct: 1588 NKPVFETSSYETIIMEGMPVGTKLTQVRAIDMD-WGANGQVTYSLHSDSQPEKVMEAFNI 1646
Query: 58 D-NEGPLNHFRIVPTKIDP 75
D N G ++ + + + DP
Sbjct: 1647 DSNTGWISTLKDLDHETDP 1665
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F++ +Y+A+V E+ +G+ ++ + A D D G N+++ Y++ G N G
Sbjct: 340 HSPYFTNPLYEASVFESAALGSAILQVTALDKD-KGENAELIYTIEAG---------NTG 389
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F+I P I+ L + L++R D+G+PP
Sbjct: 390 --NTFKIEPV----------LGIITLSKEPDMTTTGQFVLSVRVTDQGSPP 428
>gi|326916835|ref|XP_003204710.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16-like [Meleagris
gallopavo]
Length = 3001
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 11/114 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P+F Y A+V E+ GT V+TL A DAD N+ Y++ G+G F +++
Sbjct: 2178 HSPIFQVPHYNASVPEDLRPGTTVLTLDAGDADLSRENAGFDYTIVSGNGGNAFQVESR- 2236
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
G + + +V+++ LD E P+ YNLT+ A+D+G P R T
Sbjct: 2237 ---------VAWAGGQLRTQGALVLVEPLDFEAIPV-YNLTVAALDRGLPQRST 2280
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 18/108 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ++KEN P+GT + + A DAD G+ +SYS+ G G+G
Sbjct: 551 NEPVFRSNFYNVSLKENTPVGTCFLQVTATDAD-SGLFGTLSYSL--GSGIG-------- 599
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+VPT+ G K ++ + LDR+ Y+ T+ AVD G
Sbjct: 600 -----SVVPTQF--GIDKHTGHLCTAQPLDRDEGTSAYDFTITAVDGG 640
Score = 42.7 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 43/139 (30%), Positives = 57/139 (41%), Gaps = 31/139 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
N PVF+ Y+ V E+ P GT ++ + A DAD G + Y++ GD G F I
Sbjct: 2294 NPPVFARAEYRTAVSESTPPGTELLRVTAHDAD-SGPRGHVHYTISSGDQHGLFQIHEST 2352
Query: 58 ---------DNEG-------------PLNHFRIVPTKI---DPGTKKKEYNIVVLKLLDR 92
D E P HF +VP I D K + + VL R
Sbjct: 2353 GALCLARPLDRETQALHALVVQAMDVPGGHFALVPVAIEVKDVNDNKPYFPVEVLSASMR 2412
Query: 93 EIAPLGYNL-TLRAVDKGT 110
E P G + TLRA+D T
Sbjct: 2413 ENLPPGTLVTTLRAIDTDT 2431
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP F+ Y V E+ P+G+LV+ L+A D D G N +++Y + G + LG F ++
Sbjct: 1544 NAPGFAQASYVVEVPEDLPVGSLVLQLEAKDPD-EGTNGQVTYYL-GNESLGMFQVE 1598
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVF Y TV E+ G V ++A + PPG I YS+ GD GYF+ID++
Sbjct: 762 VSPPVFEQAQYFFTVPEDTLQGASVGAVRAQN--PPGHTDDIFYSISSGDPHGYFSIDSD 819
Query: 61 G-------PLNH 65
PL+H
Sbjct: 820 SGQLRTSLPLDH 831
Score = 38.9 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAP FS YQ T+ E+ P G++++T+ A D D G N +I++
Sbjct: 2074 NAPAFSQAFYQVTLPEHTPAGSILLTMSATDMD-SGSNGEITF 2115
Score = 35.8 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N P F V A+++EN P GTLV TL+A D D G+ ++ Y+V
Sbjct: 2398 NKPYFPVEVLSASMRENLPPGTLVTTLRAIDTD-TGVFGELQYAV 2441
>gi|292620545|ref|XP_001922093.2| PREDICTED: protocadherin beta-16-like [Danio rerio]
Length = 800
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAPVF VY+ATV EN P T+V T+ A DAD G+NSKI YS+
Sbjct: 228 NAPVFMQSVYKATVTENAPKDTIVSTVSATDAD-EGINSKIEYSI 271
Score = 40.0 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVF YQA+V+EN G + T++A DAD N+++SY
Sbjct: 438 NAPVFEQSSYQASVQENNTPGLSIFTVRARDAD-FNQNARVSY 479
>gi|354481305|ref|XP_003502842.1| PREDICTED: cadherin-7 [Cricetulus griseus]
Length = 785
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G+N+++ Y + GDGLG F
Sbjct: 258 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-IGVNAEMEYKIVDGDGLGIF------ 310
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
KI +E I + K LD E A Y L + A ++ PR
Sbjct: 311 ----------KISADKDTQEGIITIQKELDFE-AKTSYTLRIEAANRDADPR 351
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
>gi|149020622|gb|EDL78427.1| FAT tumor suppressor homolog 3 (Drosophila) [Rattus norvegicus]
Length = 2306
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 670 NAPVFAHEVYRGNVKESDPPGEVVAVLSTLDKDTSNINRQVSYHITGGNPRGRFAL---- 725
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 726 --------------GMVQSEWKVYVKRPLDREEQDI-YFLNITASD 756
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y A++ E+ P +++ + A DAD G N I YS+ G +F
Sbjct: 775 NSPVCDQVAYSASLPEDIPSNKIILKVSAKDAD-IGSNGDIRYSLYGSGNSDFF------ 827
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+DP + + + L LLDRE P+ YNL RA D G
Sbjct: 828 -----------LDPESGE----LKTLALLDRERVPV-YNLIARATDGG 859
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 53/114 (46%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ +GT V+++ A D G N++I+Y +R G+ G F
Sbjct: 982 NPPVFERRDYLVTVPEDTSLGTQVLSVFATSKD-IGTNAEITYLIRSGNEQGKF------ 1034
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+I+P T I VL+ LD E+ Y L + A D GTP T
Sbjct: 1035 ----------RINPKTG----GISVLEALDYEMCKRFY-LVVEAKDGGTPALST 1073
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 41/110 (37%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS VY A + E+ G VI L A D D N +I +S+ GGD DNE
Sbjct: 1087 NPPRFSQDVYSAVISEDALEGDSVILLIAEDVDSKP-NGQIRFSIVGGDR------DNE- 1138
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
F + P KKK LDRE GY+L ++AVD G P
Sbjct: 1139 ----FAVDPILGLVKVKKK---------LDRERVS-GYSLLIQAVDSGIP 1174
Score = 43.5 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 25/109 (22%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI ++A D D PG ++SYS+ F ID+ G
Sbjct: 243 SPAFSQSTYVAEVRENAASGTKVIHVRATDGD-PGTYGQVSYSIINDFAKDRFLIDSNG- 300
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLT--LRAVDKG 109
I+ + LDRE PL +++ LRA+D G
Sbjct: 301 --------------------QIITTERLDRE-NPLEGDISIYLRALDGG 328
Score = 42.4 bits (98), Expect = 0.066, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D S+S+ G+ F +D+ G
Sbjct: 1192 NSPVFTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPPFSFSILSGNEDEEFMLDSHG 1251
Query: 62 PL 63
L
Sbjct: 1252 IL 1253
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 23/107 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A V EN L+ ++A D D G+N K+ YS+ G F+ID+
Sbjct: 877 NPPVFSSNHYTACVYENTATKALLTRVQAVDPD-VGINRKVVYSLEDSAS-GVFSIDSSS 934
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK 108
+ IV+ + LDRE YN+++RA D+
Sbjct: 935 GV--------------------IVLEQPLDREQQS-SYNISVRATDQ 960
Score = 38.9 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N PVF+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D++
Sbjct: 140 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYSILSGNDRTSFLMDSK 197
Score = 35.8 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL----GYFTI 57
N PVF Y+ + E P+GT + ++A D D G N +++YS+ L F I
Sbjct: 560 NKPVFETSSYETIIMEGMPVGTKLAQVRAIDTD-WGANGQVTYSLHSDSHLEKVMEAFNI 618
Query: 58 D-NEGPLNHFRIVPTKIDP 75
D N G ++ + + + DP
Sbjct: 619 DSNTGWISTLKDLDHETDP 637
>gi|291394465|ref|XP_002713681.1| PREDICTED: cadherin 7, type 2 [Oryctolagus cuniculus]
Length = 785
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G N+++ Y + GDGLG F I
Sbjct: 258 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-IGANAEMEYKIVDGDGLGIFKI---- 312
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+D T +E I + K LD E A Y L + A +K PR
Sbjct: 313 ----------SVDKDT--QEGIITIQKELDFE-AKTSYTLRIEAANKDADPR 351
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
>gi|444730893|gb|ELW71264.1| Cadherin-7 [Tupaia chinensis]
Length = 785
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G N+++ Y + GDGLG F I
Sbjct: 258 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-IGANAEMEYKIVDGDGLGIFKI---- 312
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+D T +E I + K LD E A Y L + A +K PR
Sbjct: 313 ----------SVDKDT--QEGIITIQKELDFE-AKTSYTLRIEAANKDADPR 351
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
>gi|326928556|ref|XP_003210443.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2-like [Meleagris
gallopavo]
Length = 4281
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 52/86 (60%), Gaps = 5/86 (5%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P FS Y+A ++ +GT ++ ++A D D G N++I YS++ G+ G+F+ID
Sbjct: 1557 LHPPQFSSIHYEAEALDSAAVGTEILQVRALDQDQ-GANAEIHYSLQAGNAEGFFSID-- 1613
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVV 86
P + V K+DP +K++ + ++V
Sbjct: 1614 -PHSGIITVAQKLDP-SKQERFTLIV 1637
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F Y A ++E+ +G +++T+ A D D MN++I+YS+ G+
Sbjct: 3326 HAPEFIQDPYFADIREDAAVGEIILTVSADDLDGT-MNNQITYSIVEGN----------- 3373
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P HF I P K I + K LDRE Y+LT+RA D G P +
Sbjct: 3374 PQGHFAIQP---------KSGQISIAKHLDREEIS-SYSLTVRATDNGHPAQ 3415
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 53/109 (48%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ FV++ V+EN P GT V+ + A D D G + ++ Y +R G GL F+I+
Sbjct: 1032 PRFASFVFKGWVQENSPEGTSVMMVAAKDID-KGKDGEVQYFLREGTGLSVFSIEK---- 1086
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
D GT I + LDRE Y LT+ A+D GT P
Sbjct: 1087 ----------DTGT------IRTIGPLDRE-GTSHYWLTVLALDLGTVP 1118
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 48/113 (42%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N PVFS+ +Y A+V EN P T V+ + A+D D G N +SY + G D +F ID
Sbjct: 2275 NPPVFSEIIYTASVSENMPAHTPVVQIFASDKD-SGRNKMVSYQILDDGSDTTKFFNIDT 2333
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I + LD E + + +RA D G PP
Sbjct: 2334 STG--------------------QITTAQALDYE-ETQQFRMKVRAADHGMPP 2365
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAP F+ Y+ +V EN G +++TL DAD N +++ + GD LG FT+D
Sbjct: 2909 NAPQFTSDFYKGSVIENAEPGQIIVTLSTIDADISEQNRRVTCYITEGDVLGQFTVDQ 2966
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP FS Y+ EN P GT V+T++A D D G +G +TI N+
Sbjct: 457 HAPSFSQSSYRGAFDENVPPGTSVLTVRATDED------------EGDNGFVTYTIANQ- 503
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+ VP IDP + I K +D E+ Y+L + A D G+P R
Sbjct: 504 -----KSVPFVIDPYSGV----ISTSKSMDYELMQRWYHLRVWASDWGSPXRH 547
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG--LGYFTIDN 59
N PVF Y+A V EN P GT VI + A D D G + +++YS+ G G FTID
Sbjct: 2801 NKPVFEADPYRAFVMENMPSGTTVIQVTANDQD-TGSDGQVTYSLEAESGNLRGLFTIDG 2859
Query: 60 E 60
E
Sbjct: 2860 E 2860
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 15/104 (14%)
Query: 2 NAPVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP F D F + EN PI + + L A D D G N K+ Y + G+ FTID E
Sbjct: 712 NAPKFDDSFPRSIDIIENVPINSTIADLSAVDPDT-GFNGKLVYVISDGNVDSCFTIDLE 770
Query: 61 -------GPLNHFR-----IVPTKIDPGT-KKKEYNIVVLKLLD 91
PL+H R + T D GT +K + ++ + +LD
Sbjct: 771 LGLLQVLSPLDHERTSFYILNITVYDLGTPQKSSWKLLAVNVLD 814
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 20/108 (18%)
Query: 21 IGTLVITLKAADADPPGMNS-------------KISYSVRGGD---GLGYFTIDNEGPLN 64
+ +L+I ++ + PP ++S S SV GD G+ + P
Sbjct: 242 LASLMIQVEPSARKPPSISSVKVALPDSAEDLLYASLSVESGDSEAGIDSVDFIDGDPGR 301
Query: 65 HFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
HF + + E+ IV +K +D + P G+NL+L+A DK PP
Sbjct: 302 HFAVTRSYF----GSTEFMIVAIKEIDWLLHPFGFNLSLQAKDKNKPP 345
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P FS Y+A V E G +VI ++A D D G +++ Y + G+ +FTI++
Sbjct: 2382 NPPEFSQLQYEAKVSEMATCGHIVIKVQALDPD-SGDTTRLEYVILSGNDHRHFTINS 2438
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 6/97 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y V+EN P+GT V+ L +D D P S+ + G+ F + G
Sbjct: 3431 NPPRFFQLNYSVVVQENAPVGTSVLELIMSDRDSPENGPPYSFQITQGNDGKAFDVTQNG 3490
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG 98
++ T + KE ++ +++ D I PL
Sbjct: 3491 ------LLVTSSTLNRRVKEQYLLQVQVSDSGIPPLS 3521
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
P+FS Y+ +++E+ P+ T+V TL A DAD G N++ Y++ L FTI
Sbjct: 149 PLFSPPSYKVSIREDTPLKTVVSTLSATDAD-AGQNAEFYYALNTKSDL--FTI 199
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 56/127 (44%), Gaps = 19/127 (14%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F +Y+A + EN IGT VI L A D D G I Y++ F+IDN+G
Sbjct: 2485 SPSFQQNMYEAELAENAEIGTKVIELLAIDPD-GGPYGTIDYTIINKLADEKFSIDNKGH 2543
Query: 63 LNHF----------RIVPTKI--DPGTKKKEYNIVVLKLLDREIAP-----LGYNLTLRA 105
+ R++ K+ G K + V + L D P Y L++++
Sbjct: 2544 ITTLQKLDRENSTERVIAIKVMAKDGGGKVAFCTVKIILTDENDNPPQFKASEYTLSIQS 2603
Query: 106 -VDKGTP 111
V KG+P
Sbjct: 2604 NVSKGSP 2610
>gi|296485255|tpg|DAA27370.1| TPA: protocadherin alpha 2 [Bos taurus]
Length = 1642
Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 53/114 (46%), Gaps = 25/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR---GGDGLGYFTID 58
NAP F +Y+ + EN P GTLV+T+ A+D D G+N I YS D L F +D
Sbjct: 1046 NAPEFESTIYKVKLFENAPNGTLVVTVNASDLD-EGINKDIVYSFNTDTSADTLSKFHLD 1104
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+N + IV I D E+ L Y + + A DKG PP
Sbjct: 1105 ---PVNGYIIVKGDI-----------------DFELTKL-YEIQVEATDKGNPP 1137
Score = 42.7 bits (99), Expect = 0.052, Method: Composition-based stats.
Identities = 48/157 (30%), Positives = 62/157 (39%), Gaps = 37/157 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG---DGLGYFTID 58
N P F VY+ + EN GTLVI L ++DAD G NS+I YS D F ID
Sbjct: 238 NEPTFDQSVYKIQLLENVANGTLVIKLNSSDAD-EGSNSEIVYSFSSDVSRDIKTKFNID 296
Query: 59 -------NEGPLN-----------------------HFRIVPTKIDPGTKKKEYNIVVLK 88
+GPL+ H +I +D E +I L
Sbjct: 297 PSSGEIRTKGPLDYEEVKFYDIHVIAYDNGTPSMSGHCKISVKLVDINDNSPEVSITSLS 356
Query: 89 LLDREIAPLGYNLTLRAV---DKGTPPRETYKATPRN 122
L RE APLG + L V D G + T P++
Sbjct: 357 LPIREDAPLGSVIALITVADRDSGANGQVTCTLIPQD 393
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 18/110 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF V + E++P G+ + A+DAD G NS ++Y + + YFT+D +
Sbjct: 937 NPPVFPMAVKNLFIYESRPPGSRIPLEGASDAD-IGANSLLTYRLNSNE---YFTLDVK- 991
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
N I K +V+ KLL+RE P ++L + AVD G P
Sbjct: 992 -RNDEEI-----------KSLGLVLKKLLNREDTP-EHHLLITAVDGGKP 1028
Score = 36.2 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F+ Y VKEN P G + T+ A DAD N+ +SYS+
Sbjct: 451 NAPAFAQPEYTVFVKENNPPGRHIFTVSARDADAQ-ENALVSYSL 494
Score = 35.8 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F+ Y VKEN P G + T+ A DAD N+ +SYS+
Sbjct: 1259 NAPAFAQPEYTMFVKENNPPGCHIFTVSARDADAQ-ENALVSYSL 1302
>gi|334311079|ref|XP_003339578.1| PREDICTED: protocadherin beta-1-like [Monodelphis domestica]
Length = 790
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 54/108 (50%), Gaps = 20/108 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS +Y+ATV EN P G++V T+ AAD+D G N +++YS G +
Sbjct: 238 NAPVFSQSLYRATVAENSPAGSVVSTIFAADSD-QGSNGEVTYSFSQNAGKSHRAF---- 292
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
IDP T + I + K LD E Y L++RA D G
Sbjct: 293 ----------HIDPLTGE----IRISKPLDFETTEY-YELSVRATDGG 325
>gi|326673397|ref|XP_002664337.2| PREDICTED: protocadherin beta-16-like [Danio rerio]
Length = 794
Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAPVF VY+ATV EN P T+V T+ A DAD G+NSKI YS+
Sbjct: 228 NAPVFMQSVYKATVTENAPKDTIVSTVSATDAD-EGINSKIEYSI 271
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
N PVF YQA+V+EN G + T++A DAD N+++SY
Sbjct: 438 NPPVFEQSSYQASVQENNTPGLSIFTVRARDAD-FNQNARVSY 479
>gi|292618218|ref|XP_001921284.2| PREDICTED: protocadherin-16 [Danio rerio]
Length = 3260
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 20/119 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN-- 59
NAP+F Y+ATV E+Q G ++TL+A D D NS +++ G+ F I++
Sbjct: 2434 NAPIFHQLEYKATVSEDQLPGATILTLEAVDGDLSQENSGFDFAIASGNVGNAFQIESSV 2493
Query: 60 ---EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
EG + F+ V T +++ + LD E A YNLT+ D+G P R +
Sbjct: 2494 RFIEG--HGFQTVGT------------LILAERLDFE-ALSHYNLTVSVSDRGVPQRSS 2537
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 57/117 (48%), Gaps = 25/117 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI-DNE 60
NAP+FS +V E+QP+G +++ + A DAD G N ++SY ++ G+ G F + N
Sbjct: 1502 NAPIFSSPT-AVSVMEDQPVGFVLLYVMAWDAD-QGENGRVSYRIQSGNTAGRFVLSSNS 1559
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
G L+ +LK LDRE YNLT+ A D G P T +
Sbjct: 1560 GSLS---------------------ILKPLDRE-EQESYNLTIVAEDHGIPQHSTTQ 1594
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 25/110 (22%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP F ++A ++ENQP GT +I + A+D D G N ++Y DG FTI+ E
Sbjct: 1607 APWFERNEFEAQIRENQPAGTSIIQVTASDRD-HGTNGLVTYGGVTEDG---FTINAETG 1662
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I ++LDRE+ Y +T+ A D G PP
Sbjct: 1663 V--------------------ISATRVLDRELQD-HYTITVYAKDGGIPP 1691
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 45/108 (41%), Gaps = 18/108 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ++KEN GT + +KA DAD G I+YS+ G
Sbjct: 538 NEPVFGSSFYNVSIKENTSEGTCFLEVKADDAD-GGSFGTITYSIGSG--------SVSA 588
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
PL+ F I K+ I LDR+ ++ T+ A D G
Sbjct: 589 PLSQFSI---------NKESGQICTSTALDRDEGADSFHFTVTATDGG 627
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +YQ T+ E+ P G+ VIT+ A D D G N K+SY V G++ G L
Sbjct: 2331 PTFTQDLYQVTLPEHSPPGSPVITVTATDRD-SGENGKVSYRVLSSTRDGFYVDPKNGTL 2389
Query: 64 NHFRIVPTKIDP 75
F K DP
Sbjct: 2390 --FIRQKAKFDP 2399
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 46/112 (41%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS V+EN P GT + A D D G+NS+++Y + D YF I+++
Sbjct: 1072 NAPRFSQERVFLAVRENLPAGTGFGRVSATDRD-AGLNSRLTYRLLHTD--RYFQINSQT 1128
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I LDRE Y L + D GTPPR
Sbjct: 1129 G--------------------EISTRAALDREHQS-SYQLMVVVQDGGTPPR 1159
>gi|348514353|ref|XP_003444705.1| PREDICTED: protocadherin alpha-3-like [Oreochromis niloticus]
Length = 710
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 19/115 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS+ +Y+A + EN P+G VIT+ A DAD G+NS+I YS+R D I
Sbjct: 235 NIPIFSESLYKAKIPENIPLGLNVITVNATDAD-EGLNSEIVYSLRSKDQDHVLDIFEIE 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
P V KID ++ + + + A DKG PP +
Sbjct: 294 PQTGVIKVKGKIDFEERR------------------AFEVRVVASDKGHPPMSAH 330
Score = 39.3 bits (90), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP+F++ V V EN P+G ++ + A DAD NS+ISYS+
Sbjct: 448 NAPLFTEAVINVYVNENSPVGAVIKRVTATDAD-IDQNSQISYSL 491
>gi|344243496|gb|EGV99599.1| Protocadherin Fat 3 [Cricetulus griseus]
Length = 2774
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 1699 NAPVFAHEVYRGNVKESDPPGEVVAVLSTLDKDTSNINRQVSYHITGGNPRGRFAL---- 1754
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 1755 --------------GMVQSEWKVYVKRPLDREEQDV-YFLNITASD 1785
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS VY A + E+ G VI L A D D N +I +S+ GGD F +D
Sbjct: 2116 NPPQFSQDVYSAVISEDALEGDSVILLIAEDVDSKP-NGQIRFSIVGGDRDNEFAVD--- 2171
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P+ +V K K LDRE GY+L ++AVD G P
Sbjct: 2172 PI--LGLVKVK---------------KKLDRERVS-GYSLLIQAVDSGIP 2203
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P+ Y A++ E+ P +++ + A DAD G N I YS+ G +F
Sbjct: 1804 NSPICDQVAYSASLPEDIPSNKIILKVSAKDAD-IGSNGDIRYSLYGSGNTEFF------ 1856
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+DP + + + L LLDRE P+ YNL RA D G
Sbjct: 1857 -----------LDPESGE----LKTLALLDRERVPV-YNLIARATDGG 1888
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 49/109 (44%), Gaps = 25/109 (22%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI + A D D PG +ISYS+ F ID+ G
Sbjct: 1272 SPAFSQSTYVAEVRENAASGTKVIHVPATDGD-PGTYGQISYSIINDFAKDRFLIDSNG- 1329
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLT--LRAVDKG 109
I+ + LDRE PL +++ LRA+D G
Sbjct: 1330 --------------------QIITTERLDRE-NPLEGDISIYLRALDGG 1357
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 25/117 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A V EN L+ ++A D D G+N K+ YS+ G F+ID+
Sbjct: 1906 NPPVFSSNHYTACVYENTATKALLTRVQAMDPD-VGINRKVVYSLEDS-ASGVFSIDSSS 1963
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
+ I++ + LDRE YN+++RA D+ PR++ +
Sbjct: 1964 GV--------------------IILERPLDRE-QQSSYNISVRATDQS--PRQSLSS 1997
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ +GT V+++ A D G N++I+Y +R G+ G F
Sbjct: 2011 NPPVFERRDYLVTVPEDTSLGTQVLSVFATSKD-IGTNAEITYLIRSGNEQGKF------ 2063
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+I+P T I VL+ LD E Y L + A D GTP
Sbjct: 2064 ----------RINPKTG----GISVLEALDYETCKRFY-LVVEAKDGGTP 2098
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D S+S+ G+ F +D+ G
Sbjct: 2221 NSPVFTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPPFSFSILSGNEDEEFVLDSHG 2280
Query: 62 PL 63
L
Sbjct: 2281 IL 2282
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D++
Sbjct: 1169 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYSILSGNDRTSFLMDSKS 1227
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F+ +Y+A+V E+ +G++V+ + A D D G N+++ YS+ G N G
Sbjct: 341 HSPYFTSPLYEASVFESAALGSVVLQVTALDKD-KGENAELIYSIEAG---------NTG 390
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F+I P + T KE ++ + + L+++A D+G+PP
Sbjct: 391 --NTFKIEPV-LGIITISKEPDMTAMG---------QFVLSVKATDQGSPP 429
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL----GYFTI 57
N PVF Y+ + E P+GT + ++A D D G N +++YS+ L F I
Sbjct: 1589 NKPVFETSSYETIIMEGMPVGTKLAQVRAIDMD-WGANGQVTYSLHSDSHLEKVMEAFDI 1647
Query: 58 D-NEGPLNHFRIVPTKIDPG 76
D N G ++ + + + DP
Sbjct: 1648 DSNTGWISTLKDLDHETDPA 1667
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 25/111 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVF Y A V+ + GTL+ + A D D G N +++Y ++ D G+F I+ N
Sbjct: 859 NSPVFVGLPYYAAVQVDAEPGTLIYRVTAIDKD-KGANGEVTYILQ--DDYGHFEINPNS 915
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
G N+++ + + +++ + Y +T+ A D G P
Sbjct: 916 G---------------------NVILKEAFNSDLSNIDYGVTILAKDGGNP 945
>gi|449500407|ref|XP_002196414.2| PREDICTED: protocadherin-23 [Taeniopygia guttata]
Length = 3244
Score = 51.6 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 16/111 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N PVFS Y VKE+ PIG+ + + A D D G N++I+Y++ G+ GYF +D
Sbjct: 2533 NPPVFSSSEYHVHVKESIPIGSHITEVSAKDCD-AGTNAEITYAIISGNDRGYFGLDGRT 2591
Query: 61 GPLN-----------HFRIVPTKIDPGT--KKKEYNIVVLKLL-DREIAPL 97
G +N F +V D GT K + +V++ +L D + APL
Sbjct: 2592 GSVNLTEMLDYEDTMKFTLVIQATDGGTDVKNMAFAVVLVSVLDDNDYAPL 2642
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 15/111 (13%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-- 60
AP F+ +Y +V E+ +G V+ A D D N+ + YS+ GG+ F+++
Sbjct: 2418 APRFTKALYNLSVSEDASVGESVLLFSAIDCDWTHDNTFVEYSIIGGNAENLFSVETSIV 2477
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
G +++V + +V+ LDRE A + L L A D GTP
Sbjct: 2478 GSETSYKLVGS------------LVLSSALDRETAA-SHQLVLLASDHGTP 2515
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
NAP FS Y+A ++E+ P GT V L+A D D G N ++ Y++ R D GYF ++
Sbjct: 225 NAPAFSRGEYRARLREDAPPGTAVCRLRATDPD-LGANGEVRYAINRRQSDPDGYFAVEE 283
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ R + LDRE L + L + A D G P
Sbjct: 284 RSGVLRLR--------------------RPLDREARAL-HRLVVEARDGGAQP 315
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
++P F D ++EN PIGTLV T A D D +NSKI YS+
Sbjct: 1370 HSPHFQDDFVVIGIEENVPIGTLVYTFNAKDGDGGFLNSKIEYSL 1414
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
TV E QP GTLV T+ A D D G N + YS+ + +GYF ID
Sbjct: 1172 GTVLEGQPSGTLVTTIFAKDFD-SGNNGVVLYSIESEEDIGYFQID 1216
Score = 36.2 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 46/111 (41%), Gaps = 21/111 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGM-NSKISYSVRGGDGLGYFTIDNEGP 62
P F Y+A V E GT V+ L A+DAD PG N+++ Y++ G +
Sbjct: 452 PAFPQPHYRAAVSEAASPGTAVLRLSASDADEPGSPNAEVRYALEG----------DAAA 501
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
L RI T+ + LDRE L + A D G PPR
Sbjct: 502 LALLRIDARSGAVSTRAR---------LDRE-RQAALELRVVARDGGVPPR 542
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 22/108 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F +Y+ V EN+ G VI ++A D D G+NS + Y + G G F +++
Sbjct: 1586 PRFLKQLYETAVHENRDPGEFVIRVEAVDRD-AGLNSLLQYEILPGPGYEKFKMNS---- 1640
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
D G +V LDRE + +N+ + D GTP
Sbjct: 1641 ----------DSG------ELVTAASLDRETQEV-FNIKVLVWDSGTP 1671
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAP F Y+A+V E Q T ++ + A D D G+N + YS+ G+ F ID+
Sbjct: 2108 NAPKFEQSYYKASVWEGQSPKTDIVQVFATDLD-SGLNGETEYSIVSGNENATFLIDS 2164
Score = 35.0 bits (79), Expect = 9.2, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
++P+F+ YQ +V E+ G+ ++ L A+D D G+N ++ YS+ D G F ID+
Sbjct: 1793 HSPLFAKTQYQISVTEDLEEGSAILDLSASDED-AGLNGEVMYSLI-DDTYGAFAIDS 1848
>gi|61098459|ref|NP_001012755.1| cadherin-7 precursor [Rattus norvegicus]
gi|81909554|sp|Q5DWV2.1|CADH7_RAT RecName: Full=Cadherin-7; Flags: Precursor
gi|60417791|dbj|BAD90595.1| Cadherin7 [Rattus norvegicus]
Length = 785
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ E+ P+ ++V +KAADAD G+N+++ Y + GDGLG F
Sbjct: 258 NPPRFPRRSYQYNGPESLPVASVVARIKAADAD-IGVNAEMEYKIVDGDGLGIF------ 310
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
KI P +E I + K LD E A Y L + A ++ PR
Sbjct: 311 ----------KISPDKDTQEGIITIQKELDFE-AKTSYTLRIEAANRDADPR 351
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 24/111 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNEGP 62
PVFS +Y V E +G ++ T+ A DP NS + YS+ R D YF ID
Sbjct: 375 PVFSSPLYPMEVSEATQVGHIIGTVAA--HDPDSSNSPVRYSIDRNTDLERYFNIDANSG 432
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I K LDRE P+ +N+T+ A++ P +
Sbjct: 433 I--------------------ITTAKSLDRETNPV-HNITVLAMESQNPSQ 462
>gi|444511338|gb|ELV09857.1| Protocadherin-23, partial [Tupaia chinensis]
Length = 2686
Score = 51.6 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 13/112 (11%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y +V E+ PIG ++TL D D N+ + YS+ GD
Sbjct: 1867 HAPEFTATSYDLSVSEDTPIGRTLLTLSTVDHDWTPENTHVEYSIVSGD----------- 1915
Query: 62 PLNHFRIVPTKIDPGTKKKEYN-IVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P +HFR+ + + ++ +V+L LDRE+A + L + A D G PP
Sbjct: 1916 PQSHFRVEGSVVHAEYPHEQVGYLVLLDKLDREVAA-SHKLVVLASDGGCPP 1966
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
APVF +Y+A+VKENQ G V ++A D D G+NSK+ + + G G+F I+++
Sbjct: 1039 APVFLQTLYEASVKENQNPGQFVTRVEAMDRD-SGINSKLRFEILPGSSFGFFEINSD 1095
Score = 35.8 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 44/110 (40%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y A+V E Q T V+ + A D D G+N + YS+ G+ F ID
Sbjct: 1560 NLPRFEQSAYHASVPEGQFYNTRVLQVFATDQD-SGLNGLVEYSIVSGNREAAFQIDALS 1618
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ I +LD E Y+L ++A DKG P
Sbjct: 1619 GV--------------------ITANAILDYESVS-NYSLIVQATDKGMP 1647
Score = 35.4 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N P F YQ TV E+ P+G V+T+ AAD + G ISY +
Sbjct: 1765 NPPEFHQDFYQGTVPESAPVGYSVLTVSAADVESSG---NISYRI 1806
>gi|32810968|gb|AAP87554.1| cadherin-like protein cad2 [Aplysia californica]
Length = 736
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 56/112 (50%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N P F Y AT++E+ +GT +I + A D G N+ I+YS+ G+ G F+ID N+
Sbjct: 593 NPPEFQHSSYYATIQESANVGTPIIXITATSLD-IGXNADITYSIAAGNEQGKFSIDPNK 651
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G L VV + LD E+A Y +T+ A D+GTPP
Sbjct: 652 GVL---------------------VVTEPLDHELA-REYFITVLATDRGTPP 681
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y V E GT++ITL DAD G NS ++Y + GD LG F I + G
Sbjct: 281 NPPAFEKQNYPTAVNEGALPGTVLITLDTTDAD-SGPNSDVTYYITEGDQLGRFEIHSTG 339
Query: 62 PL 63
L
Sbjct: 340 EL 341
>gi|328778418|ref|XP_624236.3| PREDICTED: protocadherin-like wing polarity protein stan-like [Apis
mellifera]
Length = 3163
Score = 51.6 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 19/110 (17%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+PVF + Y +V E+ PIGT V+ + A D+D G N++++YS+ +G +
Sbjct: 801 SPVFENAPYSVSVFEDAPIGTTVLVVSATDSD-VGKNAQVTYSLDTDNG--------DQT 851
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ F I P + I K LDREI P Y LT+ A D G PP
Sbjct: 852 ASEFIINP---------QTGAITTTKPLDREIVP-AYLLTVTARDGGIPP 891
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 17/121 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F +A+++E P+G+ V+T+KA D D G N+++ YS+ T + G
Sbjct: 362 HAPSFEWPEEEASIREGVPVGSTVVTVKATDQD-AGRNAEVEYSILS-------TTSSSG 413
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKL-LDREIAPLGYNLTLRAVDKGTPP--RETYKA 118
N + +IDP T +V + LDRE + Y + L D+ TPP R+T A
Sbjct: 414 TANTEDALIFRIDPRT-----GVVTTRTPLDREKTEV-YTVILSVSDQATPPSARKTANA 467
Query: 119 T 119
T
Sbjct: 468 T 468
Score = 42.4 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF YQ ++ E+ +GT V+ + A DAD +N ++ Y++ DG G F +D+
Sbjct: 908 NAPVFEAPQYQGSIPEDVLVGTSVLRVSATDAD-TDLNGRVRYALE-DDGDGAFAVDSTT 965
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I K LDRE + Y L A+D+G+P T
Sbjct: 966 GI--------------------IRTAKPLDRE-SVAKYILKAVAMDRGSPSLST 998
Score = 39.3 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT 56
NAP F +Q +V EN P+G ++ ++A DAD G N++I Y++ D G T
Sbjct: 586 NAPRFYTSHFQESVSENVPVGYSILRIQAYDAD-EGANAQIKYTIGARDFTGAST 639
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 20/109 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F + + EN PIG+ V + A D D G N+ + YSV GG+ F ++
Sbjct: 1014 PAFENDKIILYIAENSPIGSTVGEIYAHDPD-EGPNAVVQYSVIGGEDSNSFALN----- 1067
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I PG + E ++ L+ LD E + L +RA +PP
Sbjct: 1068 ---------IRPGADRAE--LITLEELDYESPKKKFELVVRA---ASPP 1102
Score = 35.8 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F Y++ V E+ P GT V ++ A D P +++I Y + G+ G F I ++
Sbjct: 697 NDPYFDPKNYESVVSEDDPPGTPVTSVTATD---PDEDARIHYEITAGNTRGRFAIASQ 752
Score = 35.8 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 24/114 (21%)
Query: 2 NAPVFSDFVYQATVKEN--QPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P F++ Y A + E+ ++ ++A DAD G N+ + Y++ GG+ F+ID+
Sbjct: 479 NYPQFTERTYSAWIPEDLDYTANPVIARIRATDADS-GNNAAVRYAIIGGNTQNTFSIDS 537
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
++ ++K LD E + Y + +RA D G+P R
Sbjct: 538 --------------------MVGDVALVKPLDYE-STRSYKIVIRAQDGGSPAR 570
>gi|270006362|gb|EFA02810.1| dachsous [Tribolium castaneum]
Length = 3474
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF Y+ T+ E P+GT + +A D D G NS I+Y + G+ F +D
Sbjct: 2674 NAPVFKQSDYETTISEGTPVGTSIKKFEATDGDSAGPNSDITYDITSGNDELLFRLD--- 2730
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPL 97
++ V +D EYN+VV + DR PL
Sbjct: 2731 VISGVLFVNGTLDYDDGVTEYNLVV-RACDRAAIPL 2765
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 25/107 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTIDNEGPLNHFRIVP 70
+V+E QP GT V+ ++A D+D G N+ I+YS+ + DG G F ID PL ++
Sbjct: 1351 SVREEQPPGTEVVRVRAVDSD-NGQNASITYSLLKRQDSDGYGVFKID---PLTG--VIR 1404
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
T++ +LD E + Y L + A D G PP++T +
Sbjct: 1405 TRM---------------MLDHEEKTI-YRLAVVASDAGKPPKQTVR 1435
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 52/116 (44%), Gaps = 24/116 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P+F+ Y ATV EN +GT V+ + A D D G N +I YS+ R D F
Sbjct: 221 NQPIFNQSRYIATVPENATVGTTVLQVFATDKD-SGENGQIEYSINRRQSDRDNMF---- 275
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+IDP T IVV K LD E L + L + A D G P ET
Sbjct: 276 ------------RIDPTTGL----IVVNKPLDFETKEL-HELVIVAKDHGLQPLET 314
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 48/110 (43%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y A+V E G V+ + A D D G NS+I Y G+ F I+ E
Sbjct: 2307 NAPKFTQQQYSASVWEGNKKGAFVLQVVAFD-DDEGHNSRIRYHFLDGNHDNAFKIEPE- 2364
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+ T I +LDREI Y LT+ A D+G P
Sbjct: 2365 ---FSGILKTNI---------------VLDREIRD-NYKLTVIATDEGVP 2395
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F VYQA V E GT VI + A D D G NS ISYS+
Sbjct: 439 NAPEFDQEVYQANVMEVSDPGTSVIQVLATDKD-EGNNSAISYSL 482
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 23/111 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y +V+E++P+ + ++ + A D D G N++++Y + G+ G
Sbjct: 1023 NPPVFERNEYSKSVEESRPVNSQILQVTAVDLD-TGNNARLTYRLLPGNNTGEV------ 1075
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLK-LLDREIAPLGYNLTLRAVDKGTP 111
F I P + LK LDRE Y LT+ A D GTP
Sbjct: 1076 ----FGIFPNS----------GWLYLKGSLDRETKDR-YELTVTATDNGTP 1111
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 51/112 (45%), Gaps = 27/112 (24%)
Query: 2 NAPVFS-DFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP F + Y+ V EN I ++ T+ A D D G+N +I+YS+ GG+ F IDN
Sbjct: 1885 NAPEFKINSCYRLYVPENNDIA-VIHTVVAKDLDV-GLNGEITYSINGGNVGNKFIIDNR 1942
Query: 61 -GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
G L K LDRE + Y LT+ A D+G P
Sbjct: 1943 TGAL----------------------TAKPLDRE-SHSRYYLTITAQDRGKP 1971
>gi|156347842|ref|XP_001621773.1| hypothetical protein NEMVEDRAFT_v1g221587 [Nematostella vectensis]
gi|156208027|gb|EDO29673.1| predicted protein [Nematostella vectensis]
Length = 1012
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 22/115 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+F + +V E + +GT+ +T+ A D D G NS ++YS+ G+ G+F+I+N
Sbjct: 478 PLFQSPSFNVSVNEIERLGTVFLTVSATDGDA-GSNSALTYSIAAGNEEGFFSINN---- 532
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
K I V K LDRE Y LT+ A D G PP + A
Sbjct: 533 ----------------KTGAISVAKQLDRETRDQ-YTLTVMAQDGGEPPLNSTTA 570
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 22/115 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+F + +V E + +GT+ +T+ A D D G NS ++YS+ G+ G+F+I+N
Sbjct: 781 PLFQSPSFNVSVNEIERLGTVFLTVSATDGDA-GSNSALTYSIAAGNEEGFFSINN---- 835
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
K I V K LDRE Y LT+ A D G PP + A
Sbjct: 836 ----------------KTGAISVAKQLDRETRDQ-YTLTVMAQDGGEPPLNSTTA 873
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 40/91 (43%), Gaps = 22/91 (24%)
Query: 28 LKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVL 87
+ A D D G NS ++YS+ G+ G+F+I+N K I V
Sbjct: 96 VSATDGDA-GANSALTYSIAAGNEEGFFSINN--------------------KTGAISVA 134
Query: 88 KLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
K LDRE Y LT+ A D G PP + A
Sbjct: 135 KQLDRETRDQ-YTLTVMAQDGGEPPLNSTTA 164
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N PV D V Q ++ E I T V T+ A+D D G N ++ YS+ G G+F I
Sbjct: 581 NPPVIQDAVIQVSLSETAAIDTPVATVIASDKD-IGANGRLMYSIESG-AHGHFQI 634
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N PV D V Q ++ E I T V T+ A+D D G N ++ YS+ G G+F I
Sbjct: 884 NPPVIQDAVIQVSLSETAAIDTPVATVIASDKD-IGANGRLMYSIESG-AHGHFQI 937
>gi|322800567|gb|EFZ21553.1| hypothetical protein SINV_02181 [Solenopsis invicta]
Length = 1368
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 53/110 (48%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ Y ATV E G V+ L A+DAD G+NS+I Y + G+
Sbjct: 1245 NPPIFTQMQYSATVLEGNTKGDFVVKLSASDAD-QGLNSRILYHIVDGN----------- 1292
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P N F I P P + NIV LDREI Y LT+ A D+G P
Sbjct: 1293 PDNAFTISP----PYSGVVRTNIV----LDREIRE-KYRLTIIATDQGNP 1333
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 25/107 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTIDNEGPLNHFRIVP 70
+V+E QP GT V ++A D D G N+ ++YS+ R DG FTID P+ ++
Sbjct: 386 SVREEQPTGTEVARVRALDTD-LGENASVTYSISKDRDSDGYNVFTID---PITG--MIR 439
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
TK VL +R + Y +++RA D G PPR + +
Sbjct: 440 TK------------AVLDHEERNV----YRVSVRATDAGHPPRHSER 470
>gi|156383900|ref|XP_001633070.1| predicted protein [Nematostella vectensis]
gi|156220135|gb|EDO41007.1| predicted protein [Nematostella vectensis]
Length = 257
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF+ VY+A V EN+ +GT+V ++A D D +NSK++YS+ G +GYF ID
Sbjct: 77 PVFTSLVYEANVTENERVGTMVTKVEAKDPDVM-INSKMTYSLHG--DMGYFAID 128
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 40/90 (44%), Gaps = 17/90 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P FS Y A V E P+GTLVI L A+D D +VR L Y I + L
Sbjct: 178 PSFSRQTYYAHVTEGTPVGTLVINLNASDPD----------TVRESSHLVYRIIHEKSSL 227
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
+R V +DP + +I +DRE
Sbjct: 228 ESYRFV---MDPESG----DITTQSEIDRE 250
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS Y V E P G ++ + A DAD N+KI YS+ GD G F +
Sbjct: 5 NAPEFSQLAYPVNVSERTPGGQGILQVTATDAD-SDENAKIQYSIVSGDE-GKFVVQEAF 62
Query: 62 PLNHFRIVPTKIDP 75
H + P
Sbjct: 63 VAVHVHVTDANDQP 76
>gi|149065690|gb|EDM15563.1| rCG59452 [Rattus norvegicus]
Length = 3034
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 9/113 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
NAP+F +QA V EN P+G V+ ++A DAD G N+++ Y + LG +ID+
Sbjct: 576 NAPIFVSSPFQAAVLENVPLGHSVLHIQAVDAD-AGENARLQYRLVDTASTILGGSSIDS 634
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
E P++ P +I + I V LDRE+ Y+ + AVD G+PP
Sbjct: 635 ENPVSAPDF-PFQIHNSSGW----ITVCAELDRELLE-HYSFGVEAVDHGSPP 681
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 24/110 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF Y +V E++P+GT + T+ A D D G N++I+Y + E P+
Sbjct: 802 PVFQSSHYTVSVSEDRPVGTSIATISATDED-TGENARITYVL-------------EDPV 847
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
FRI P D GT I + LD E Y L + A D G P +
Sbjct: 848 PQFRIDP---DTGT------IYTMTELDYE-DQAAYTLAITAQDNGIPQK 887
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N PVF+ VY+ + E+ +G+ V+TL+A D D NS I+Y + GG+ F + ++
Sbjct: 698 NDPVFTQPVYELRLNEDAAVGSSVLTLRARDRDA---NSVITYQLTGGNTRNRFALSSQ 753
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 23/111 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++PVF Y+ ++EN +G V+T++A D D P N+ + Y + G G G F ID
Sbjct: 364 HSPVFEQSEYRERIRENLEVGYEVLTIRATDGDAPS-NANMRYRLLEGAG-GVFEIDARS 421
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ R V +DRE A Y L + A D+G P
Sbjct: 422 GVVRTRAV--------------------VDREEAA-EYQLLVEANDQGRNP 451
Score = 38.5 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 47/114 (41%), Gaps = 25/114 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG---GDGLGYFTIDN 59
+P F YQ +V EN+P GT VI L+A D D G ++SY + GYF ID
Sbjct: 257 SPQFPLPSYQVSVPENEPAGTAVIELRAHDPD-EGEAGRLSYQMEALFDERSNGYFLID- 314
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ + LDRE + L + AVD G+P R
Sbjct: 315 -------------------ATTGAVTTARALDRETKDT-HVLKVSAVDHGSPRR 348
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVF + V+EN P+G++V ++A D D G N++I Y + G+ F +D
Sbjct: 1010 NPPVFEKDELELFVEENSPVGSVVARIRANDPD-EGPNAQIMYQIVEGNVPEVFQLD 1065
Score = 35.4 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN-E 60
N P FS+ Y V E+ + T V+ ++A D D G N+ I YS+ G+ G F + +
Sbjct: 470 NYPQFSEKRYVVQVPEDVAVNTPVLRVQATDRD-QGQNAAIHYSIVSGNLKGQFYLHSLS 528
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G L+ V+ LD E A Y L ++A D G PP
Sbjct: 529 GSLD---------------------VINPLDFE-AIREYTLRIKAQDGGRPP 558
>gi|66773380|ref|NP_001019280.1| protocadherin 1 gamma 9 [Danio rerio]
gi|50881574|gb|AAT85367.1| protocadherin cluster 1 gamma 9 [Danio rerio]
Length = 890
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
NAPVF+ +Y+AT+KEN P GT + T+ A+DAD G NS ISYS
Sbjct: 251 NAPVFNQSIYKATIKENAPKGTYITTVNASDAD-SGSNSLISYS 293
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 46/116 (39%), Gaps = 22/116 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPV S + V E+ P+G + D D G +G TID
Sbjct: 355 NAPVISVMSFFTPVSEDAPVGNTIAIFNVKDVDA------------GDNGHVECTIDRSS 402
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
P F++ + + Y +V LDRE YN+T+ A D G+P + K
Sbjct: 403 P---FKL------QSSLRNYYTLVTDAALDRERVA-EYNITITATDSGSPALSSQK 448
>gi|399152181|emb|CCI61373.1| fat membrane protein, partial [Platynereis dumerilii]
Length = 1157
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 12/127 (9%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF Y + E PIG+ V ++ A D D G+N+ I+YS+ G+ LG+FTI+N L
Sbjct: 56 PVFQMKSYSTRLSELVPIGSFVASVTATDNDT-GINALITYSITAGNNLGWFTINNATGL 114
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAP--LGYNLTLRAVDKGTP----PRETYK 117
V TK ++ ++ +K D P NLT+ D+ +TY+
Sbjct: 115 -----VTTKAQLDHEQLSTVVLTIKAQDGATEPTQTSTNLTISIWDENDEVPNFSEDTYR 169
Query: 118 ATPRNGL 124
T GL
Sbjct: 170 VTLMEGL 176
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y+ ++ E+ I T V+ + A D D G N+K++Y + G+ G F+I+
Sbjct: 687 NDPVFARNYYEPSLYEDAEINTQVVRVGATDVD-KGNNAKLTYEIVSGNEAGRFSIN--- 742
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I + LDRE+ Y LT+ A D G P R +
Sbjct: 743 -----------------EVTGQITLTSRLDREVVS-EYQLTVLAKDNGKPSRNS 778
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 25/115 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGY---FTIDNE 60
P FS+ Y+ T+ E G VIT+KA D D G+N ++Y++ L Y F+ID
Sbjct: 161 PNFSEDTYRVTLMEGLGAGREVITVKAEDND-QGLNGSVTYALDPDVDLMYPNMFSIDTV 219
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I +LDRE+ YNL +RA D G PP+ +
Sbjct: 220 SG--------------------RITTRSILDREVQST-YNLVVRAQDAGNPPQSS 253
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 17/112 (15%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F + Y+ + EN+ GT ++TL+AA AD N + Y V G G G
Sbjct: 1059 PSFVETSYRGQLYENEASGTSIVTLQAAYADARSGN--VQYYVTNVTGEG------RGQW 1110
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+F++ PT G + +LDRE + + + AVD +P T
Sbjct: 1111 RYFQVNPTS---GVLSSQ------GVLDRERGVQEFTVDVYAVDTSSPAIRT 1153
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N P F + Y +VKE P+ T V + A D D G N++++YS+ G D
Sbjct: 578 NRPAFLNDTYTMSVKEGSPVPTFVGLVSAKDLD-LGRNAEVTYSIEGKD 625
>gi|332030986|gb|EGI70612.1| Protein dachsous [Acromyrmex echinatior]
Length = 2470
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 53/110 (48%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ Y ATV E G V+ L A+DAD G+NS+I Y + G+
Sbjct: 1331 NPPIFTQIQYSATVLEGNTKGDFVVKLSASDAD-QGLNSRILYHIVDGN----------- 1378
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P N F I P P + NIV LDREI Y LT+ A D+G P
Sbjct: 1379 PDNAFTISP----PYSGIVRTNIV----LDREIRE-KYRLTIIATDQGNP 1419
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 25/107 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTIDNEGPLNHFRIVP 70
+V+E QP GT V ++A D D G N+ ++YS+ R DG FTID P+ ++
Sbjct: 344 SVREEQPPGTEVARVRAMDMDL-GENASVTYSIPKDRDSDGYNVFTID---PITG--MIR 397
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
TK VL +R + Y +++RA D G PPR + +
Sbjct: 398 TK------------AVLDHEERNV----YRVSIRATDAGHPPRHSER 428
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 6 FSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNH 65
F + Y ++EN +GT +I + A D G +++YS+ G+ F ID + L H
Sbjct: 1194 FQNDTYNVVIQENSAVGTEIIKITAVRTD--GRKQRVTYSIASGNNYNTFAIDEDTGLLH 1251
Query: 66 FRIVPTKID 74
PT++D
Sbjct: 1252 VND-PTRLD 1259
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSK-ISYSVRGGDGLGYFTID-N 59
N P F + +Y+ ++KE+ P GT + L+A D D + + Y + G+ G F ++
Sbjct: 1736 NYPHFLEKLYEVSIKEDAPYGTTIAVLQAKDDDLVNTTAATLVYDITSGNDGGLFRVEKT 1795
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLR 104
G + +V + +D + + YN+VV+ PL +LR
Sbjct: 1796 TGAV----LVNSTLDCDLEPEVYNLVVMVCDSDPTLPLCALASLR 1836
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 50/112 (44%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y + EN P GT+V ++ A D D G NS + Y+V + FT
Sbjct: 228 NDPRFEKDFYGFELLENLPSGTVVGSVSAIDPD-IGKNSLLRYTVVQAN--SSFT----- 279
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+DP T + I+ + LDRE + + L L A D+GTP R
Sbjct: 280 -----------VDPDTGE----IITREPLDRETKSV-HELVLEARDQGTPSR 315
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 15/108 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F Y V EN+PIGT+V + +A+D D G+ ++YS+ G+ ID+
Sbjct: 1845 NSPKFPVSEYLEFVGENEPIGTVVFSARASDLD-RGIFGSLNYSIISA-ASGFSDIDDSW 1902
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
L F + T GT ++ + D E Y TLRA D G
Sbjct: 1903 KL--FAVDET----GT------VITRAVFDYEQRNR-YAFTLRATDAG 1937
>gi|195026491|ref|XP_001986268.1| GH21267 [Drosophila grimshawi]
gi|193902268|gb|EDW01135.1| GH21267 [Drosophila grimshawi]
Length = 3596
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 19/110 (17%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP+F + Y A+V E+ PIGT V+ + A D+D G+N++I+YS+ NE
Sbjct: 896 APIFENAPYSASVFEDAPIGTTVLVVSATDSD-VGINAQITYSL------------NEES 942
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKL-LDREIAPLGYNLTLRAVDKGTP 111
+N + DP T ++ ++ LDRE GY LT+ A D G P
Sbjct: 943 INGL----SSPDPFTINQQTGAIITSAPLDRETTS-GYLLTVTAKDGGNP 987
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/112 (37%), Positives = 57/112 (50%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL-GYFTIDNE 60
NAP F + +YQ+++ E+ +GT VI + A D D G+N +I Y + D G F ID
Sbjct: 1005 NAPAFKNPLYQSSILEDALVGTSVIQVSATDPD-IGLNGRIKYLLSDRDQEDGSFVID-- 1061
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PT GT + K LDRE + Y+LT AVDKG+PP
Sbjct: 1062 ---------PTS---GTIRTN------KGLDRESVAI-YHLTAIAVDKGSPP 1094
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F +Q +V EN P+G +I ++A D+D G N++ISYS+ D DN
Sbjct: 687 NAPRFYTSQFQESVLENVPVGYNIIRVQAYDSD-EGANAEISYSISERD-------DN-- 736
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P +DP T + +K LDRE + + A D G PP+
Sbjct: 737 -------FPLAVDPRTGW----VQTIKPLDRE-EQNRFAFQVVAKDGGVPPK 776
Score = 41.6 bits (96), Expect = 0.096, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F+ Y+A V E+QP GT V T+ A D P +S++ Y + G+ G F I ++
Sbjct: 792 NDPTFNPKYYEANVGEDQPPGTPVTTVTATD---PDEDSRLHYEISTGNTRGRFAITSQ 847
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 15/119 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG-GDGLGYFTIDNE 60
++P F ++A+++E +G+ VITL+A D D G N++I Y + DG G D E
Sbjct: 464 HSPTFEAEQFEASIREGATVGSTVITLRATDQD-IGKNAEIEYGIEAITDGAGVVQ-DQE 521
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
P+ FRI + I LDRE + Y++ + A D E AT
Sbjct: 522 MPI--FRI---------DSRSGVISTRSSLDRETSD-SYHMLVTASDMAAAQSERKTAT 568
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT-IDNEGP 62
P F+ V EN P+G++V + A D D G+N+ + YS+ GGD F+ + G
Sbjct: 1113 PTFASDKITLYVPENSPVGSVVGEIHAHDPD-EGVNAVVHYSIIGGDDSNSFSLVTRPGS 1171
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVV 86
+ T++D + +K + +VV
Sbjct: 1172 ERAQLLTMTELDYESSRKRFELVV 1195
Score = 38.5 bits (88), Expect = 0.97, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 23/113 (20%)
Query: 2 NAPVFSDFVYQATVKENQ-PIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P FS+ Y V E+Q V ++A DAD G N+ I Y++ GG+ F+ID+
Sbjct: 581 NYPQFSERTYTVQVPEDQWGDDNNVAHIRATDADQ-GNNAAIRYAIIGGNTQSQFSIDSM 639
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
++ ++K LD E + Y L +RA D G+P R
Sbjct: 640 SG--------------------DVSLVKPLDYE-SVRSYRLVIRAQDGGSPSR 671
>gi|149721177|ref|XP_001492677.1| PREDICTED: cadherin-7 [Equus caballus]
Length = 785
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G N+++ Y + GDGLG F I
Sbjct: 258 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-IGANAEMEYKIVDGDGLGIFKI---- 312
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+D T +E I + K LD E A Y L + A +K PR
Sbjct: 313 ----------SVDKDT--QEGIITIQKDLDFE-AKTSYTLRIEAANKDADPR 351
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNEGP 62
PVFS +Y V E +G ++ T+ A DP NS + YS+ R D YF ID
Sbjct: 375 PVFSSPLYPMEVSEATQVGNIIGTVAA--HDPDSSNSPVRYSIDRNTDLERYFNIDANSG 432
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I K LDRE + +N+T+ A++ P +
Sbjct: 433 V--------------------ITTAKSLDRETNAV-HNITVLAMESQNPSQ 462
>gi|345784312|ref|XP_541069.3| PREDICTED: cadherin-7 [Canis lupus familiaris]
Length = 785
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G N+++ Y + GDGLG F I
Sbjct: 258 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-IGANAEMEYKIVDGDGLGIFKI---- 312
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+D T +E I + K LD E A Y L + A +K PR
Sbjct: 313 ----------SVDKDT--QEGIITIQKDLDFE-AKTSYTLRIEAANKDADPR 351
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNEGP 62
PVFS +Y V E +G ++ T+ A DP NS + YS+ R D YF ID
Sbjct: 375 PVFSSPLYPMEVSEATQVGNIIGTVAA--HDPDSSNSPVRYSIDRNTDLERYFNIDANSG 432
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I K LDRE + +N+T+ A++ P +
Sbjct: 433 V--------------------ITTAKSLDRETNAI-HNITVLAMESQNPSQ 462
>gi|190336627|gb|AAI62461.1| Pcdh1g9 protein [Danio rerio]
Length = 891
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
NAPVF+ +Y+AT+KEN P GT + T+ A+DAD G NS ISYS
Sbjct: 251 NAPVFNQSIYKATIKENAPKGTYITTVNASDAD-SGSNSLISYS 293
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 45/116 (38%), Gaps = 22/116 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPV S + V E+ P+ + D D G +G TID
Sbjct: 355 NAPVISVMSFFTPVSEDAPVSNTIAIFNVKDVDA------------GDNGHVECTIDKSS 402
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
P F++ + + Y +V LDRE YN+T+ A D G+P + K
Sbjct: 403 P---FKL------QSSLRNYYTLVTDAALDRERVA-EYNITITATDSGSPALSSQK 448
>gi|432112888|gb|ELK35478.1| Cadherin-7 [Myotis davidii]
Length = 785
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G N+++ Y + GDGLG F I
Sbjct: 258 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-IGANAEMEYKIVDGDGLGIFKI---- 312
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+D T +E I + K LD E A Y L + A +K PR
Sbjct: 313 ----------SVDKDT--QEGIITIQKDLDFE-AKTSYTLRIEAANKDADPR 351
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A + E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGIPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
>gi|340728239|ref|XP_003402435.1| PREDICTED: protein dachsous-like [Bombus terrestris]
Length = 3327
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 53/110 (48%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ Y ATV E G V+ L A+DAD GMNS+I Y + G+
Sbjct: 2180 NPPIFTQTQYSATVLEGNVKGDFVVKLSASDAD-QGMNSRILYHIVDGN----------- 2227
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P N F I P P + NIV LDREI Y LT+ A D+G P
Sbjct: 2228 PDNAFTISP----PYSGIVRTNIV----LDREIRE-KYRLTIIATDQGNP 2268
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P+F+ Y A++ EN +GT V+ + A D+D G N +I YS+ R D F ID
Sbjct: 220 NPPIFNQTRYVASIAENATVGTPVLAVNATDSD-AGDNGRIEYSINRRQSDREEMFRIDP 278
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYN--LTLRAVD 107
E + + V +D +K++ ++V + DR PL + L++R D
Sbjct: 279 ETGMVY---VNKALDFESKERHELVIVAR--DRGAQPLEASAFLSVRVTD 323
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 13/108 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F Y V EN+PIGT+V + +A+D D G+ ++YS+ G+ ID+
Sbjct: 2696 NSPKFPVSEYLEFVGENEPIGTIVFSARASDLD-RGIFGSLNYSIVSAAATGFSDIDDSW 2754
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
L F + K + + D E+ Y TLRA D G
Sbjct: 2755 KL--FAV---------DGKSGTVTTRAVFDYELRNR-YAFTLRATDTG 2790
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 3 APV--FSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
APV F + Y+ ++EN GT VI + A +D G +SYS+ G+ G FTID +
Sbjct: 2037 APVLKFQNESYEVVIQENSAAGTEVIQVSAVRSD--GRRQHVSYSLGSGNDFGTFTIDED 2094
Query: 61 GPL 63
L
Sbjct: 2095 TGL 2097
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 25/108 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTIDNEGPLNHFRIVP 70
+V+E QP GT V ++A D D G N+ ++Y++ R DG FTID P+ ++
Sbjct: 1171 SVREEQPPGTEVARVRALDTD-LGENASVTYTILKDRDSDGYNVFTID---PITG--MIR 1224
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
TK VL +R + Y ++++A D G PPR +A
Sbjct: 1225 TK------------AVLDHEERNV----YRVSVKATDAGRPPRHGIRA 1256
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG 49
N P+F +Y ATV E+ P+G+ + ++A D D G+N+ ++Y++ G
Sbjct: 540 NEPIFEKPLYNATVSEDMPVGSCFLKVQATDPD-CGVNAMVNYTLAAG 586
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPG-MNSKISYSVRGGDGLGYFTID-N 59
N P F + ++Q ++KEN GT V L+A D D G + + + Y + G+ G F +D
Sbjct: 2587 NYPRFLEDLHQVSIKENAARGTTVAMLRAKDDDLAGSVAANLVYEITSGNDGGLFRVDKT 2646
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLR 104
G + V +D + +N+VV+ ++PL LR
Sbjct: 2647 TGAVQ----VNATLDCDLEPDIHNLVVMACDSDPVSPLCALTRLR 2687
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N P+F Y T+K + PI ++ L A D D G+ +++Y + G+ G F ID N
Sbjct: 644 NRPIFEPRKYNVTLKSDGPIQGPILRLVATDLD-VGLFGQVAYRITNGNEAGVFHIDRNT 702
Query: 61 GPLNHFR 67
G L R
Sbjct: 703 GELQVAR 709
>gi|432930271|ref|XP_004081405.1| PREDICTED: cadherin-20-like [Oryzias latipes]
Length = 730
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 20/116 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF +YQ +V E+ P+G++V + A D D G+N+++ Y + GDG F I +
Sbjct: 196 NAPVFDQRLYQMSVLESAPMGSVVGRIWAKDRD-VGVNAEMKYRIIDGDGRDTFDISTD- 253
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
P N F I I+V KLLD E P Y L + V+ T P T++
Sbjct: 254 PTNRFGI---------------IMVKKLLDFEKKP-SYTLKVEGVN--THPDLTFQ 291
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 10/116 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P F D YQATV E +GT VI L A DAD P G ++++ YS+ +G YF++D
Sbjct: 87 NEPKFLDGPYQATVPEMSKVGTPVIQLTATDADDPTYGNSARVVYSIL--EGQPYFSVDA 144
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTP 111
+ + R+ +D T++ ++ K + ++ L N+TL V+ P
Sbjct: 145 KTGM--VRVSLADMDRETRENYTVVIQAKDMGGQLGGLAGTTTINITLSDVNDNAP 198
>gi|392341624|ref|XP_001078424.3| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Rattus
norvegicus]
gi|392349660|ref|XP_001070474.3| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Rattus
norvegicus]
Length = 3075
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 9/113 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
NAP+F +QA V EN P+G V+ ++A DAD G N+++ Y + LG +ID+
Sbjct: 576 NAPIFVSSPFQAAVLENVPLGHSVLHIQAVDAD-AGENARLQYRLVDTASTILGGSSIDS 634
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
E P++ P +I + I V LDRE+ Y+ + AVD G+PP
Sbjct: 635 ENPVSAPDF-PFQIHNSSGW----ITVCAELDRELLE-HYSFGVEAVDHGSPP 681
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 24/110 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF Y +V E++P+GT + T+ A D D G N++I+Y + E P+
Sbjct: 802 PVFQSSHYTVSVSEDRPVGTSIATISATDED-TGENARITYVL-------------EDPV 847
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
FRI P D GT I + LD E Y L + A D G P +
Sbjct: 848 PQFRIDP---DTGT------IYTMTELDYE-DQAAYTLAITAQDNGIPQK 887
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N PVF+ VY+ + E+ +G+ V+TL+A D D NS I+Y + GG+ F + ++
Sbjct: 698 NDPVFTQPVYELRLNEDAAVGSSVLTLRARDRDA---NSVITYQLTGGNTRNRFALSSQ 753
Score = 39.3 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 23/111 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++PVF Y+ ++EN +G V+T++A D D P N+ + Y + G G G F ID
Sbjct: 364 HSPVFEQSEYRERIRENLEVGYEVLTIRATDGDAPS-NANMRYRLLEGAG-GVFEIDARS 421
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ R V +DRE A Y L + A D+G P
Sbjct: 422 GVVRTRAV--------------------VDREEAA-EYQLLVEANDQGRNP 451
Score = 38.5 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 47/114 (41%), Gaps = 25/114 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG---GDGLGYFTIDN 59
+P F YQ +V EN+P GT VI L+A D D G ++SY + GYF ID
Sbjct: 257 SPQFPLPSYQVSVPENEPAGTAVIELRAHDPD-EGEAGRLSYQMEALFDERSNGYFLID- 314
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ + LDRE + L + AVD G+P R
Sbjct: 315 -------------------ATTGAVTTARALDRETKDT-HVLKVSAVDHGSPRR 348
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVF + V+EN P+G++V ++A D D G N++I Y + G+ F +D
Sbjct: 1010 NPPVFEKDELELFVEENSPVGSVVARIRANDPD-EGPNAQIMYQIVEGNVPEVFQLD 1065
Score = 35.4 bits (80), Expect = 8.0, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN-E 60
N P FS+ Y V E+ + T V+ ++A D D G N+ I YS+ G+ G F + +
Sbjct: 470 NYPQFSEKRYVVQVPEDVAVNTPVLRVQATDRD-QGQNAAIHYSIVSGNLKGQFYLHSLS 528
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G L+ V+ LD E A Y L ++A D G PP
Sbjct: 529 GSLD---------------------VINPLDFE-AIREYTLRIKAQDGGRPP 558
>gi|344265172|ref|XP_003404660.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2-like [Loxodonta
africana]
Length = 4345
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F +Y V EN +G +++T+ A D D P +N+ I+YS+ GG+ LG+FTI
Sbjct: 3313 PRFLQDLYSVKVLENAIVGDIILTVSATDEDGP-LNNAITYSLVGGNQLGHFTI------ 3365
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K + V K LD E Y L LRA D G PP
Sbjct: 3366 --------------HPKTGELQVAKALDWEQTS-SYLLRLRATDSGQPP 3399
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ FV+Q V+E+ P+GT V+ + A D D G++ +I Y +R G L F+I+
Sbjct: 1019 LHPPHFTSFVHQGQVQEDSPLGTQVMVVAAHD-DDSGLDGEIQYFLRAGTDLAAFSINQ- 1076
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
D G I LDRE Y LT+ AVDKG+ P
Sbjct: 1077 -------------DTGA------IQTTAPLDREFISY-YWLTVLAVDKGSVP 1108
Score = 42.7 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 9/119 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P S V+ +V+E+ P+ T V+ L A D D N K+++++ G+ +G+F I
Sbjct: 1125 NPPRISRPVFYPSVREDAPLNTSVLQLDAWDPDSSS-NGKLTFNITSGNHMGFFVIH--- 1180
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYN--LTLRAVD-KGTPPRETYK 117
PL K+D + K+ +I+ + +LD PL + +R +D PP ++K
Sbjct: 1181 PLTGLLSTARKLD--RENKDEHILEVTVLDNGEPPLKSTSRVVVRVLDVNDNPPVFSHK 1237
Score = 40.4 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 34/106 (32%), Positives = 45/106 (42%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y+ V EN G LV TLK D D N +++ + GD LG F I
Sbjct: 2896 NAPRFASEDYRGFVVENSEPGELVATLKTLDDDISEQNRQVTCYITEGDPLGQFGISQ-- 2953
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E+ I K LDRE+ Y L++ A D
Sbjct: 2954 ----------------AEDEWRIFSRKTLDRELTA-KYLLSVTASD 2982
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
N P FS VY +V E P T VI L A+D D G N +SY V G + F
Sbjct: 2260 NPPTFSQLVYTTSVSEGLPAQTPVIQLLASDRD-SGQNRDVSYQIVEDGSDISKF----- 2313
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
F+I + + T ++ LD E A +++ +RA+D+G PP
Sbjct: 2314 -----FQINGSTGEMSTAQE---------LDYE-AQQHFHMKVRAMDRGDPP 2350
Score = 38.5 bits (88), Expect = 0.78, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 30/62 (48%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y TV+EN PIG+ V+ L +D D P S+ + G+ F + +G
Sbjct: 3416 NPPRFFQLNYSTTVQENSPIGSKVLQLILSDPDSPENGPPYSFQITNGNIGSAFRVTADG 3475
Query: 62 PL 63
L
Sbjct: 3476 WL 3477
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 22/113 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ Y+A V + GT ++ ++A D D G N+++ YS + G+ G+F+I
Sbjct: 1542 LHPPRFTQLHYEAQVPDTTAPGTDLLQVRAID-DDRGANAEVHYSFQKGNSEGFFSIS-- 1598
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
L V K+D + + LT+RA D+G+P R
Sbjct: 1599 -VLLGIITVARKLDQAYHAQ------------------HTLTVRAEDQGSPQR 1632
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR---GGDGLGYFTID 58
N P+F Y+A + EN P+GT VI + A D D G + ++SY + G + F ID
Sbjct: 2787 NRPIFEADPYKAFLTENMPVGTTVIQVTANDQD-TGSDGRVSYRLAVDPGSNVHELFAID 2845
Query: 59 NE 60
+E
Sbjct: 2846 SE 2847
>gi|410977822|ref|XP_003995299.1| PREDICTED: cadherin-7 [Felis catus]
Length = 785
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G N+++ Y + GDGLG F I
Sbjct: 258 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-IGANAEMEYKIVDGDGLGIFKI---- 312
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+D T +E I + K LD E A Y L + A +K PR
Sbjct: 313 ----------SVDKDT--QEGIITIQKDLDFE-AKTSYTLRIEAANKDADPR 351
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
>gi|350403194|ref|XP_003486727.1| PREDICTED: protein dachsous-like [Bombus impatiens]
Length = 3229
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 53/110 (48%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ Y ATV E G V+ L A+DAD GMNS+I Y + G+
Sbjct: 2082 NPPIFTQTQYSATVLEGNVKGDFVVKLSASDAD-QGMNSRILYHIVDGN----------- 2129
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P N F I P P + NIV LDREI Y LT+ A D+G P
Sbjct: 2130 PDNAFTISP----PYSGIVRTNIV----LDREIRE-KYRLTIIATDQGNP 2170
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P+F+ Y A++ EN +GT V+ + A D+D G N +I YS+ R D F ID
Sbjct: 122 NPPIFNQTRYVASIAENATVGTPVLAVNATDSD-AGDNGRIEYSINRRQSDREEMFRIDP 180
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYN--LTLRAVD 107
E + + V +D +K++ ++V + DR PL + L++R D
Sbjct: 181 ETGMVY---VNKALDFESKERHELVIVAR--DRGAQPLEASAFLSVRVTD 225
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 13/108 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F Y V EN+PIGT+V + +A+D D G+ ++YS+ G+ ID+
Sbjct: 2598 NSPKFPVSEYLEFVGENEPIGTIVFSARASDLD-RGIFGSLNYSIVSAAATGFSDIDDSW 2656
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
L F + K + + D E+ Y TLRA D G
Sbjct: 2657 KL--FAV---------DGKSGTVTTRAVFDYELRNR-YAFTLRATDTG 2692
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 25/108 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTIDNEGPLNHFRIVP 70
+V+E QP GT V ++A D D G N+ ++Y++ R DG FTID P+ ++
Sbjct: 1073 SVREEQPPGTEVARVRALDTD-LGENASVTYTILKDRDSDGYNVFTID---PITG--MIR 1126
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
TK VL +R + Y ++++A D G PPR +A
Sbjct: 1127 TK------------AVLDHEERNV----YRVSVKATDAGRPPRHGIRA 1158
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPG-MNSKISYSVRGGDGLGYFTID-N 59
N P F + ++Q ++KEN GT V L+A D D G + + ++Y + G+ G F +D
Sbjct: 2489 NYPRFLEDLHQVSIKENAVRGTTVAMLRAKDDDLAGSVAANLAYEITSGNDGGLFRVDKT 2548
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLR 104
G + V +D + +N+VV+ ++PL LR
Sbjct: 2549 TGAVQ----VNATLDCDLEPDIHNLVVMACDSDPVSPLCALTRLR 2589
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG 49
N P+F +Y ATV E+ P+G+ + ++A D D G+N+ ++Y++ G
Sbjct: 442 NEPIFEKPLYNATVSEDMPVGSCFLKVQATDPD-CGVNAMVNYTLAAG 488
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y + EN P GTLV ++ A+D+D G N+ + Y+V + FT
Sbjct: 957 NDPRFEKDFYGFDLLENLPSGTLVGSVSASDSD-LGKNALLRYAVVQAN--SSFT----- 1008
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+DP T + I + LDRE + + L L A D+GTP R
Sbjct: 1009 -----------VDPDTGE----ITTKEPLDRETKGV-HELVLEARDQGTPSR 1044
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 52/116 (44%), Gaps = 27/116 (23%)
Query: 2 NAPVFS-DFVYQATVKENQPIGTLVI-TLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N+P F Y V ENQ GT VI T+ AAD D G N +I YS+ GG+ F +D+
Sbjct: 1585 NSPEFRPGSCYTLAVPENQ--GTSVIHTIAAADLDE-GKNGEIYYSIVGGNIGAKFILDS 1641
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
++ + LDRE A Y LT+ A DKG P ET
Sbjct: 1642 ---------------------ITGMLSMSNLDRE-AVSKYILTISAKDKGRPSLET 1675
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N P+F Y T+K + PI ++ L A D D G+ +++Y + G+ G F ID N
Sbjct: 546 NRPIFEPRKYNVTLKSDGPIQGPILRLVATDLD-VGLFGQVAYRITNGNEAGVFHIDRNT 604
Query: 61 GPLNHFR 67
G L R
Sbjct: 605 GELQVAR 611
>gi|194034566|ref|XP_001926047.1| PREDICTED: cadherin-7 [Sus scrofa]
Length = 728
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G N+++ Y + GDGLG F I
Sbjct: 201 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-IGANAEMEYKIVDGDGLGIFKI---- 255
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+D T +E I + K LD E A Y L + A +K PR
Sbjct: 256 ----------SVDKDT--QEGIITIQKDLDFE-AKTSYTLRIEAANKDADPR 294
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 92 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 148
>gi|260805468|ref|XP_002597609.1| hypothetical protein BRAFLDRAFT_225827 [Branchiostoma floridae]
gi|229282874|gb|EEN53621.1| hypothetical protein BRAFLDRAFT_225827 [Branchiostoma floridae]
Length = 112
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAPVF++ + +V+EN PIGT V T+ A DAD G N I+YS+ G F +D E
Sbjct: 3 NAPVFANETFVVSVRENAPIGTKVTTVSADDAD-AGRNGYITYSISPGSSAEMFLVDGE 60
>gi|123704351|ref|NP_001074046.1| cadherin EGF LAG seven-pass G-type receptor 2 precursor [Danio
rerio]
gi|117938962|dbj|BAF36659.1| cadherin EGF LAG seven-pass G-type receptor 2 [Danio rerio]
Length = 2941
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 56/115 (48%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
N+PVF Y +V E+ P+ T V+ + A D D G+N ++ Y+ +GG DG G F I++
Sbjct: 871 NSPVFQRDRYLGSVMEDIPVFTSVLQVSATDRD-SGLNGRVFYTFQGGEDGDGDFIIEST 929
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ + L+ LDRE + YNL AVDKG P +T
Sbjct: 930 SGI--------------------VRTLRRLDRENTAI-YNLQAFAVDKGVPALKT 963
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/110 (35%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F +QATV EN P+G VI ++A DAD G NS++ Y + FTI+N
Sbjct: 561 NAPIFVSTPFQATVLENVPVGYSVIHIQAVDAD-AGDNSRLEYRLTETTANFPFTINNST 619
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
IVV LDRE YN + A D G P
Sbjct: 620 GW--------------------IVVAAELDRETVDF-YNFGVEARDHGAP 648
Score = 42.0 bits (97), Expect = 0.077, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 53/116 (45%), Gaps = 20/116 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F +YQ +V ENQP GT V+ LKA D D G ++ Y + + +
Sbjct: 241 PQFHPPMYQVSVPENQPAGTFVVVLKAVDPD-EGEAGRLEYVLEA--------LFDSRSN 291
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
N F +DP + + +++LDRE + + AVD GT PR T AT
Sbjct: 292 NLF-----AVDPASGV----VSTVEILDRETKDT-HVFRVTAVDHGT-PRRTAMAT 336
Score = 39.3 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF Y + E++P+GT V+ + A D D G N++I+Y + D + F ID
Sbjct: 770 PVFQSSHYTVNINEDRPVGTTVVMISATDED-TGENARITYIM--DDSIPQFNID 821
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS+ Y V E+ T ++ + A D D G N+ + +S+ G+ G F ID +
Sbjct: 455 NAPQFSEKRYIVQVPEDLTPNTEILQVTATDQD-RGNNAVVHFSIMSGNTRGQFYIDAQ- 512
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+D ++ LD E+ Y L +RA D G PP
Sbjct: 513 --------TGKLD-----------LVSQLDYEMNK-EYTLRIRAQDGGRPP 543
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVF + V+EN PIG +V + A+D D G N++I Y + G+ F +D
Sbjct: 977 NPPVFEKDEFDIFVEENSPIGLVVAHISASDPD-EGSNAQIMYQIVEGNIPEVFQLD 1032
Score = 37.0 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F+ Y + E+ +GT V+T+ A D D +NS ++Y + G+ F+I ++
Sbjct: 666 NNPEFTQKAYYMRLNEDAAVGTSVVTVSAVDQD---INSVVTYQISSGNTRNRFSITSQ 721
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 23/110 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLG-YFTIDNEGP 62
P F Y+ +++EN IG V+T++A D D P +N I Y + +G F ID+
Sbjct: 349 PAFEQQDYKESIRENLEIGYEVLTVRATDGDAP-INGNILYHLLNSNGTNDVFEIDSRSG 407
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ R L+DRE Y L + A D+G P
Sbjct: 408 VIRTR--------------------GLVDRETVD-SYMLMVEANDQGRDP 436
>gi|348546135|ref|XP_003460534.1| PREDICTED: protocadherin alpha-3-like, partial [Oreochromis
niloticus]
gi|348546137|ref|XP_003460535.1| PREDICTED: protocadherin alpha-3-like, partial [Oreochromis
niloticus]
Length = 531
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 58/115 (50%), Gaps = 19/115 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y+ V EN PIGT V+TL A DAD G N +I Y++ T + +
Sbjct: 236 NTPVFAKSLYKVRVFENVPIGTTVLTLNATDAD-EGTNKEIIYTLS--------TKEQDH 286
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
L F+I P + GT E N+ D E P+ + + +A DKG PP +
Sbjct: 287 VLQIFKIDP---NTGTLTVEGNV------DFEEHPV-FEIRAQASDKGQPPMSAH 331
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 22/107 (20%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKI 73
TVKE+ GT V + D D G +G + T+D + P F++
Sbjct: 356 TVKEDAKAGTAVALVSVIDKDG------------GKNGEVHCTVDEDAP---FKL----- 395
Query: 74 DPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
K Y+++V+ LDRE GY++T+ A D G+PP + P
Sbjct: 396 -ETNYKNYYSLIVVAPLDRETIS-GYDVTIIASDGGSPPLSSTSIIP 440
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
NAP FS + VKEN +GT++ T+ A DAD N +++YS
Sbjct: 449 NAPQFSSSILNIYVKENSHVGTILKTVTAFDAD-MNKNGEVTYS 491
>gi|170031843|ref|XP_001843793.1| cadherin [Culex quinquefasciatus]
gi|167871192|gb|EDS34575.1| cadherin [Culex quinquefasciatus]
Length = 2888
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 25/107 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTIDNEGPLNHFRIVP 70
+V+E QPIGT V+ ++A D D G N+ I+YS+ R DG G F+ID P++ ++
Sbjct: 678 SVREEQPIGTEVVRVRAIDRD-NGANASITYSILKGRDSDGYGMFSID---PISG--VLR 731
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
TK+ LD E + Y L + A D G PPR+T +
Sbjct: 732 TKVS---------------LDHEEKTI-YRLAVAATDNGKPPRQTVR 762
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N P F Y ATV E+ +GT V+T+KA DAD G+N++I YS+
Sbjct: 1340 NDPKFELQKYIATVDEDAQLGTTVLTVKAVDAD-IGINARIVYSL 1383
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 24/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P+F +Y+ ++EN G+++ + A+DAD G+N+ + YS+ +
Sbjct: 562 NSPIFPKQLYEFEIEENMRRGSVIGQVTASDAD-TGINAVVRYSLIPSN----------- 609
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ F+I P + T+ LDRE Y+L + A D+GTP R +
Sbjct: 610 --SSFQINPVSGEITTRDS---------LDRETKS-DYDLVVEARDQGTPYRSS 651
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 14/113 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL---GYFTID 58
N P+F Y V E+ P + ++ + A DAD G N++++Y + G D G T
Sbjct: 443 NPPIFEKTEYSIKVIESTPSNSQIVQVTAVDAD-TGNNARLTYRILGDDQRQRSGKSTSS 501
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+E + F I P + G I + LDRE+ YN+T+ D G P
Sbjct: 502 DEHVPDIFGIFP---NSGW------IYLRTKLDRELQER-YNITVIVSDNGVP 544
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 46/108 (42%), Gaps = 13/108 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y V EN+P+G + T +A D D GM ++YS+ GY ID+
Sbjct: 2198 NEPQFPVPEYLEFVGENEPVGISIFTARATDMD-RGMYGNVNYSIENALASGYSAIDDGW 2256
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
L K+D + N V D E Y+ TL+A D G
Sbjct: 2257 KL-------FKVDSISGVINSNAV----FDYE-EKNRYSFTLKATDSG 2292
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 47/110 (42%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F+ Y A+V E G VI + A DAD G N+ I Y + G+ F I+
Sbjct: 1663 NSPRFTQQQYSASVWEGNNKGAFVIKVGAFDAD-QGSNAHILYHIVDGNHDNAFIIEPA- 1720
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
IV T I +LDREI Y L + A D+G P
Sbjct: 1721 ---FSGIVKTNI---------------VLDREIRD-KYKLKVIATDEGVP 1751
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 24/104 (23%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
Y V EN + +++ T+ A+DAD G+N +I+YS+ GG+ F+ID
Sbjct: 1245 YPLAVPENSDL-SVIHTVAASDADE-GLNGEITYSISGGNIGNKFSID------------ 1290
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
I+ G + + LDRE+ Y L + A D+G+P +
Sbjct: 1291 --INTGA-------ITARPLDREVHAR-YVLQITAQDRGSPTSQ 1324
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 6 FSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
F + Y+ + EN PIG V+ L A +D G KI YS G+ G F+ID
Sbjct: 1556 FQNNSYKVNLVENTPIGQTVLHLNAVRSD--GRRQKIIYSFGSGNEDGTFSID 1606
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P F + VY + E+ P G+ V+ + A ++ G N+ ++Y + G G +F +D+
Sbjct: 1119 NPPRFLESVYHVNISESVPTGSFVVRVSAKSSNDNG-NANLTYEIPKGVGEDHFVVDS 1175
>gi|4323229|gb|AAD16269.1| cadherin [Gallus gallus]
Length = 138
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F +QATV EN P+G VI ++A DAD G N++++YS+ G G+
Sbjct: 36 NAPIFVSTPFQATVLENVPVGYSVIHVQAIDAD-SGDNARLAYSLLEA-GAGF------- 86
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
P I+ T IVV LDRE Y+ + A D+G+PP +
Sbjct: 87 --------PLAINNSTGW----IVVASELDREAVDF-YSFGVEAQDQGSPPMAS 127
>gi|194884197|ref|XP_001976182.1| GG20142 [Drosophila erecta]
gi|190659369|gb|EDV56582.1| GG20142 [Drosophila erecta]
Length = 3582
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 19/110 (17%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP+F + Y A+V E+ P+GT V+ + A D+D G+N++I+YS+ NE
Sbjct: 894 APIFENAPYSASVFEDAPVGTTVLVVSATDSD-VGVNAQITYSL------------NEES 940
Query: 63 LNHF-RIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+N P I+P T IV LDRE GY LT+ A D G P
Sbjct: 941 INGLGSPDPFSINPQTGA----IVTNAALDRETTS-GYLLTVTAKDGGNP 985
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 42/112 (37%), Positives = 57/112 (50%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDNE 60
NAP F +YQA++ E+ +GT VI + A+D D G+N +I Y + D G F ID
Sbjct: 1003 NAPSFKSPLYQASILEDALVGTSVIQVAASDPD-VGLNGRIKYLLSDRDVEDGSFVID-- 1059
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PT GT + K LDRE + ++LT AVDKG+PP
Sbjct: 1060 ---------PTS---GTIRTN------KGLDRESVAV-FHLTAIAVDKGSPP 1092
Score = 42.7 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F +Q +V EN P+G +I ++A D+D G N++I+YS+ D DN
Sbjct: 685 NAPRFYTSQFQESVLENVPVGYNIIRVQAYDSD-EGANAEITYSISERD-------DN-- 734
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P +DP T + +K LDRE + + A D G PP+
Sbjct: 735 -------FPLAVDPRTGW----VQTIKPLDRE-EQGRFAFQVVAKDGGVPPK 774
Score = 42.0 bits (97), Expect = 0.085, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 15/119 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG-GDGLGYFTIDNE 60
++P F ++A+++E +G+ VITL+A D D G N++I Y + DG G D E
Sbjct: 460 HSPTFEAEQFEASIREGATVGSTVITLRATDQD-IGKNAEIEYGIEAVTDGAG-LAQDQE 517
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
P+ FRI + I LDRE + Y+L + A D + E AT
Sbjct: 518 MPI--FRI---------DSRSGVISTRSSLDRETSD-SYHLLVTAADLASAQSERRTAT 564
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F+ Y+A V E+QP GT V T+ A D P +S++ Y + G+ G F I ++
Sbjct: 790 NDPAFNPKYYEANVGEDQPPGTPVTTVTATD---PDEDSRLHYEITTGNTRGRFAITSQ 845
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 25/115 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGT---LVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P FS+ Y V E+Q G V ++A DAD G N+ I Y++ GG+ F+ID
Sbjct: 577 NYPQFSERTYTVQVPEDQWGGAEDNTVAHIRATDADQ-GNNAAIRYAIIGGNTQSQFSID 635
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ ++ ++K LD E + Y L +RA D G+P R
Sbjct: 636 SMSG--------------------DVSLVKPLDYE-SVRSYRLVIRAQDGGSPSR 669
Score = 38.9 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT-IDNEGP 62
P F+ V EN P+G++V + A D D G+N+ + YS+ GGD F+ + G
Sbjct: 1111 PTFASDKITLYVPENSPVGSVVGEIHAHDPD-EGVNAVVHYSIIGGDDSNAFSLVTRPGS 1169
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVV 86
+ T++D + +K + +VV
Sbjct: 1170 ERAQLLTMTELDYESTRKRFELVV 1193
>gi|51262103|gb|AAH79887.1| Fat4 protein, partial [Mus musculus]
Length = 2019
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 53/110 (48%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVFS Y+ + E PIGT V + A D+D S+ SY + G+ G F+
Sbjct: 440 DPPVFSLSTYRVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGAFS----- 494
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I V LDRE P+ YNLT+ AVD GTP
Sbjct: 495 -----------INPQTGQ----ITVTSGLDRESLPV-YNLTVLAVDSGTP 528
Score = 42.7 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF + TV EN P GT VI L A DAD G N+ I+Y+V+ D F ID
Sbjct: 230 NSPVFVPDEFFPTVMENAPSGTTVIHLNATDAD-SGANAVIAYTVQSSDS-DLFVID 284
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F Y V +N +GT +I + A D G+NS++ Y V G+ LG F +DN+
Sbjct: 19 NPPQFLQNKYFTPVTKNVKVGTKLIKVTAVDDKDFGLNSEVEYFVSDGNHLGKFKLDND 77
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
+ P FS AT+ E+ IG++V T+ A D D MN ISY++ G+ G F I++
Sbjct: 125 HTPEFSQNHISATIPESHSIGSVVRTVSARDRD-TAMNGLISYNIISGNEEGIFAINS 181
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD-PPGMNSKISYSVRGGDGLGYFTIDNE 60
N PV + V + V EN+ GTLV+TL++ D D PP Y + G YF++
Sbjct: 546 NGPVLT--VSEGEVLENKRPGTLVMTLQSTDPDLPPNQGPFNYYLLSTGPATNYFSLSTA 603
Query: 61 GPLNHFR 67
G L+ R
Sbjct: 604 GVLSTTR 610
>gi|158297323|ref|XP_317578.4| AGAP007905-PA [Anopheles gambiae str. PEST]
gi|157015140|gb|EAA12903.4| AGAP007905-PA [Anopheles gambiae str. PEST]
Length = 2864
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 25/107 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTIDNEGPLNHFRIVP 70
+V+E QPIGT V+ ++A D D G N+ ISYS+ R DG G F+ID P++ ++
Sbjct: 642 SVREEQPIGTEVVKVRAIDRD-HGQNASISYSILKGRDSDGYGMFSID---PMSG--VIR 695
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
TK LD E + Y L + A D G PP++T +
Sbjct: 696 TKTS---------------LDHEEKTI-YRLAVAATDNGKPPKQTVR 726
Score = 42.7 bits (99), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 48/113 (42%), Gaps = 21/113 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGM-NSKISYSVRGGDGLGYFTIDNE 60
NAP F Y+AT+ E PI + L A DAD G +S++ Y + G+ G F+ID
Sbjct: 2070 NAPEFQPGSYEATIGELAPIKHSIAKLSALDADLSGSPSSEVIYQIISGNDSGMFSIDLV 2129
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
L + K LD + Y+L +RA D + PR
Sbjct: 2130 SGL--------------------LYTNKYLDYDHGQTQYSLVVRACDSHSAPR 2162
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 26/115 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P+F+ +Y+ ++EN G ++ T+ A+D+D G+N+ + YS+
Sbjct: 526 NSPIFAKSLYEFEIEENMRRGAMIGTVSASDSD-AGINAVVRYSLI-------------- 570
Query: 62 PLN-HFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
P N F+I P + T+ LDRE Y+L + A D+GTP R +
Sbjct: 571 PSNTSFQINPVSGEITTRDS---------LDRE-TKASYDLVVEARDQGTPYRSS 615
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 49/110 (44%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y A+V E GT VI + A D+D G N++I Y + G+ F I+
Sbjct: 1634 NAPRFTQQQYAASVWEGNSKGTFVIKVGAFDSD-QGANARILYHIVDGNHDNAFIIEPA- 1691
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
IV T I +LDREI Y L + A D+G P
Sbjct: 1692 ---FSGIVKTNI---------------VLDREIRD-KYKLKVIATDEGVP 1722
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N P F Y AT+ E+ IGT V+T+KA DAD G+N++I YS+
Sbjct: 1311 NDPKFELQKYIATIDEDAQIGTTVLTVKAIDAD-VGINARIVYSL 1354
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 6 FSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
F + Y+ T+ EN P+G V+ L A +D G KI YS G+ G F+ID
Sbjct: 1527 FQNSSYRVTLSENTPVGQPVLQLSAVRSD--GRRQKIIYSFGSGNEDGTFSID 1577
>gi|410899192|ref|XP_003963081.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3-like
[Takifugu rubripes]
Length = 2908
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 41/115 (35%), Positives = 55/115 (47%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
NAP F YQ +V E+ P T V+ + A D D N ++ Y+ + G DG G FTI+
Sbjct: 673 NAPQFLSPRYQGSVSEDAPPYTSVLQISATDRDAHA-NGRVQYTFQNGEDGDGDFTIE-- 729
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
PT G + ++ LDRE P Y LT AVD+G PP+ T
Sbjct: 730 ---------PTS---GILR------TVRRLDRESVPF-YELTAYAVDRGVPPQRT 765
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 47/146 (32%), Positives = 69/146 (47%), Gaps = 28/146 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADP-----------PGMNSKIS--YSVRGGD 50
P F + YQ V ENQP GT VI + A+D DP P MNS+ S + +
Sbjct: 41 PFFPHYNYQVQVAENQPPGTSVIVMSASDPDPGDAGRVRYTMAPLMNSRSSDYFHIHQDT 100
Query: 51 GLGYFT--IDNEG-PLNHFRIVPTKIDPGTKK-KEYNIVVLKLLDR-EIAPL----GYNL 101
GL T +D E L++FR+ T D G+ + +V + + DR + +P+ Y
Sbjct: 101 GLITTTQILDREHMDLHYFRVTAT--DYGSARLSGTTMVAITVSDRNDHSPIFEQTEYRE 158
Query: 102 TLRA-VDKGTPP---RETYKATPRNG 123
T+R V++G P R T +P N
Sbjct: 159 TIRENVEEGYPILQLRATDSDSPTNA 184
Score = 38.9 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F +QA+V E+ P+G+ ++ ++A D D G N+++ Y + G F I++
Sbjct: 363 NPPIFVSTPFQASVLESSPVGSSILHIQAIDTD-SGDNARLEYRLTGTSSDTPFIINSAT 421
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ V LDRE Y + A D GTPP
Sbjct: 422 GW--------------------VTVRSALDRESVE-HYFFGVEARDYGTPP 451
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAPVF ++ VKEN +G++V + A D D G N++I Y + G+ F +D
Sbjct: 779 NAPVFPADDFEVLVKENSAVGSVVAQITATDPD-EGANAQIMYQIVEGNIPEIFQMD 834
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS+ Y VKEN + ++ + A D D N+ + Y++ G+ G F+ID+
Sbjct: 257 NVPQFSEKRYVVAVKENVRPHSEILRVSATDRDKDS-NAAVHYNIISGNSRGQFSIDSVT 315
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I V+ LD E A Y L +RA D G PP
Sbjct: 316 G--------------------EIQVVAPLDYE-AEREYTLRVRAQDNGRPP 345
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
PVF Y +V E+ P G+LV+ + A D D G N++I+Y + D + F ID+
Sbjct: 572 PVFQSAHYSVSVNEDSPPGSLVVVISATD-DDVGENARITYFLE--DNIPQFRIDS 624
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y + + E+ +GT V T+ A D D +NS ++Y + GG+ F I G
Sbjct: 468 NRPEFLQKEYYSRLNEDAAVGTSVATVTAVDRD---VNSAVTYQITGGNTRNRFAISTAG 524
>gi|195120792|ref|XP_002004905.1| GI19343 [Drosophila mojavensis]
gi|193909973|gb|EDW08840.1| GI19343 [Drosophila mojavensis]
Length = 3570
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/112 (38%), Positives = 58/112 (51%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDNE 60
NAP F + +YQA++ E+ +GT VI + A+D D G+N +I Y + D G F ID
Sbjct: 1000 NAPAFKNPLYQASILEDALVGTSVIQVSASDPD-IGLNGRIKYLLSDRDVEDGSFVID-- 1056
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PT GT + K LDRE + Y+LT AVDKG+PP
Sbjct: 1057 ---------PTS---GTIRTN------KGLDRE-SVATYHLTAIAVDKGSPP 1089
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 19/110 (17%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP+F + Y A V E+ P+GT V+ + A D+D G+N++I+YS+ NE
Sbjct: 891 APIFENAPYSAPVFEDAPVGTTVLVVSATDSD-VGINAQITYSL------------NEES 937
Query: 63 LNHFRIV-PTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+N P I+P T I+ LDRE GY LT+ A D G P
Sbjct: 938 INGLSSPDPFTINPQTGA----IITSAPLDRETTS-GYLLTVTAKDGGNP 982
Score = 42.7 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 39/119 (32%), Positives = 56/119 (47%), Gaps = 15/119 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG-GDGLGYFTIDNE 60
++P F ++A+++E +G+ VITL+A D D G N++I Y + DGLG D E
Sbjct: 459 HSPTFEAEQFEASIREGATVGSTVITLRATDQD-IGKNAEIEYGIEAVTDGLGA-AQDQE 516
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
P+ FRI + I LDRE A Y+L + A D E AT
Sbjct: 517 MPI--FRI---------DSRSGVISTRSSLDRE-ASDSYHLLVTASDMAAAQSERKTAT 563
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F+ Y+A V E+QP GT V T+ A D P +S++ Y + G+ G F I ++
Sbjct: 787 NDPSFNPKYYEANVGEDQPPGTPVTTVTATD---PDEDSRLHYEISTGNTRGRFAITSQ 842
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F +Q +V EN P+G +I ++A D+D G N++ISYS+ D DN
Sbjct: 682 NAPRFYTSQFQESVLENVPVGYNIIRVQAYDSD-EGANAEISYSISERD-------DN-- 731
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P +D T + +K LDRE + + A D G PP+
Sbjct: 732 -------FPLAVDARTGW----VQTIKPLDRE-EQNRFAFQVVAKDGGVPPK 771
Score = 39.3 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 23/113 (20%)
Query: 2 NAPVFSDFVYQATVKENQ-PIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P FS+ Y V E+Q V ++A DAD G N+ I Y++ GG+ F+ID+
Sbjct: 576 NYPQFSERTYTVQVPEDQWGDDNTVAHIRATDADQ-GNNAAIRYAIIGGNTQSQFSIDSM 634
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
++ ++K LD E + Y L +RA D G+P R
Sbjct: 635 SG--------------------DVSLVKPLDYE-SVRSYRLVIRAQDGGSPSR 666
Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT-IDNEGP 62
P F+ V EN P+G++V + A D D G+N+ + YS+ GGD F+ + G
Sbjct: 1108 PTFASDKITLYVPENSPVGSVVGEIHAHDPD-EGVNAVVHYSIIGGDDSNSFSLVTRPGS 1166
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVV 86
+ T++D + +K + +VV
Sbjct: 1167 ERAQLLTMTELDYESSRKRFELVV 1190
>gi|358413158|ref|XP_003582480.1| PREDICTED: protocadherin alpha-3 [Bos taurus]
gi|359067588|ref|XP_002689289.2| PREDICTED: protocadherin alpha-3 [Bos taurus]
Length = 801
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 53/114 (46%), Gaps = 25/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR---GGDGLGYFTID 58
NAP F +Y+ + EN P GTLV+T+ A+D D G+N I YS D L F +D
Sbjct: 238 NAPEFESTIYKVKLFENAPNGTLVVTVNASDLD-EGINKDIVYSFNTDTSADTLSKFHLD 296
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+N + IV I D E+ L Y + + A DKG PP
Sbjct: 297 ---PVNGYIIVKGDI-----------------DFELTKL-YEIQVEATDKGNPP 329
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 18/110 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF V + E++P G+ + A+DAD G NS ++Y + + YFT+D +
Sbjct: 129 NPPVFPMAVKNLFIYESRPPGSRIPLEGASDAD-IGANSLLTYRLNSNE---YFTLDVK- 183
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
N I K +V+ KLL+RE P ++L + AVD G P
Sbjct: 184 -RNDEEI-----------KSLGLVLKKLLNREDTP-EHHLLITAVDGGKP 220
Score = 35.8 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F+ Y VKEN P G + T+ A DAD N+ +SYS+
Sbjct: 451 NAPAFAQPEYTMFVKENNPPGCHIFTVSARDADAQ-ENALVSYSL 494
>gi|431899687|gb|ELK07641.1| Protocadherin Fat 4 [Pteropus alecto]
Length = 1782
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ VY+ + E P G+ V + A D D G+N+ + YS+ G+GLG+F I
Sbjct: 473 PVFAQQVYRVNLSEEAPPGSYVSGVSATDGDS-GLNANLRYSIVSGNGLGWFHIS----- 526
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T G LDRE+A L + A D+G P+ +Y
Sbjct: 527 EHSGLVTTGAAGG-------------LDRELAS-QIVLNISARDQGVHPKVSY 565
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD P N IS + GG NE HF + +K
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSPAANGNISVQILGG---------NEQ--RHFEVQSSK 413
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD-KGTPPRETYKA 118
+ P I V LDRE P YNLT+ D G PP +A
Sbjct: 414 V-PNLSL----IKVASALDRERIP-SYNLTVSVSDNSGAPPAAGVQA 454
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N+ I Y ++ +EG
Sbjct: 246 NPPVFGSSHYQAGVPEDAAVGSSVLQVAAADAD-EGTNADIRYRLQ-----------DEG 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P ++DP T I V + LD E A Y+LT++A+D+G P
Sbjct: 294 -------TPFQMDPETGL----ITVREPLDFE-ARRQYSLTVQALDRGVP 331
Score = 42.4 bits (98), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G N+ + YS+ G + G F+
Sbjct: 1311 NTPSFPKSTLFVDVLENMRIGELVSSVTATDSD-SGDNADLHYSITGTNNHGTFS----- 1364
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1365 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1402
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G VI A D+D G++ + SY + G+ G F +D
Sbjct: 131 NAPVFPDPSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIIQGNEAGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ P + ++V LDRE+ P Y L ++ DKG P R Y
Sbjct: 189 -----------ITLSPSGEGAFLHLVSKGGLDREVTP-QYQLLVQVEDKGEPRRRGY 233
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y+ T+ E++P+ + ++A D D G N +I+YS+ G+ F I +G
Sbjct: 992 NPPVFDQLSYEVTLSESEPVNSRFFKVQAFDKD-SGANGEIAYSIAEGNTGDAFGIFPDG 1050
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D + + +VV DR + PL + + +
Sbjct: 1051 QL----YIKSELDRELQDRYVLLVVAS--DRAVEPLSATVNVTVI 1089
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A ++EN+P G+ + T+ A D D G+N + YS+ GD
Sbjct: 685 NSPVFYPVQYFARIQENEPGGSYITTVSATDPD-LGLNGTVKYSISAGD 732
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQAT+ E+ T V+ + A+D D G N I YSV G+ F ID+
Sbjct: 1206 NAPKFVKDFYQATISESAANLTQVLRVSASDVD-EGSNGLIRYSVMKGNEERQFAIDSTS 1264
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ ++ LD E A Y+L ++AVD G
Sbjct: 1265 G--------------------QVTLIGKLDYE-ATAAYSLVIQAVDSG 1291
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N PVFS Y V EN +G V ++ A+ D +NS ISY + GD G F I
Sbjct: 789 NPPVFSQAAYSFVVFENVALGYHVGSVSASTMD---LNSNISYLITTGDQKGMFAI 841
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 23/99 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL-NHFRIVPTK 72
++ EN P+GT VI++ A D D +N ++SY TI + P NHF I K
Sbjct: 1428 SIAENVPVGTSVISVTAHDPDAD-INGQLSY-----------TIIQQMPRGNHFGIDEVK 1475
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
GT + I DRE A L + LT++A D+ P
Sbjct: 1476 ---GTIYTDAEI------DREFASL-FELTVKASDQAVP 1504
>gi|229442261|gb|AAI72773.1| FAT tumor suppressor 1 precursor [synthetic construct]
Length = 1338
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N +++Y + GGD LG F ++
Sbjct: 840 PRFTAEIYKGTVSEDDPQGGVIAILSTTDADSEEINRQVTYFITGGDPLGQFAVE----- 894
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
T + E+ + V K LDRE Y LT+ A D
Sbjct: 895 -------------TIQNEWKVYVKKPLDREKRD-NYLLTITATD 924
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 50/106 (47%), Gaps = 22/106 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y + E+ + VIT+ A DAD P NS I YS+ G+ FTID
Sbjct: 1255 NTPVFSQDTYTTVISEDAVLEQSVITVMADDADGPS-NSHIHYSIIDGNQGSSFTID--- 1310
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
P + G K V KLLDRE GY LT++A D
Sbjct: 1311 --------PVR---GEVK------VTKLLDRETIS-GYTLTVQASD 1338
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 58/119 (48%), Gaps = 25/119 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP FS Y TV EN GTL+ ++A DAD G+N KI YS + D G F+I+
Sbjct: 1045 NAPEFSADPYAITVFENTEPGTLLTRVQATDAD-AGLNRKILYSLIDSAD--GQFSINEL 1101
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I + K LDRE+ + Y L+L+AVD+G P R T T
Sbjct: 1102 SGI--------------------IQLEKPLDRELQAV-YTLSLKAVDQGLPRRLTATGT 1139
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ +GT V+ + AA D N++I+YS+ G+ G F+ID+
Sbjct: 1150 NPPVFEYREYGATVSEDILVGTEVLQVYAASRDIEA-NAEITYSIISGNEHGKFSIDS-- 1206
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + Y LT+ A D GTP
Sbjct: 1207 ------------------KTGAVFIIENLDYE-SSHEYYLTVEATDGGTP 1237
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P+F +Y+A + E+ P G V +KA DAD ++ K+ YS+ G+ +F ID+
Sbjct: 310 NPPLFEQQIYEARISEHAPHGHFVTCVKAYDADSSDID-KLQYSILSGNDHKHFVIDS 366
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N+PVF Y+A + EN P G+ VI ++A+DAD G N ++ YS+
Sbjct: 729 NSPVFESSPYEAFIVENLPGGSRVIQIRASDAD-SGTNGQVMYSL 772
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 20/110 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y T+ E IGT V+ ++A D+D N ISY + G +
Sbjct: 203 NPPVFAQQSYAVTLSEASVIGTSVVQVRATDSDSEP-NRGISYQMFGNHSKSH------- 254
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+HF +D T I +L+ LD E + + +RAVD G P
Sbjct: 255 --DHFH-----VDSSTGL----ISLLRTLDYE-QSRQHTIFVRAVDGGMP 292
>gi|270014310|gb|EFA10758.1| starry night [Tribolium castaneum]
Length = 3257
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 23/111 (20%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNEG 61
APVF + Y A+V E+ +GT V+ + A D D G+N++I+YS+ GD FT
Sbjct: 837 APVFENAPYTASVFEDAAVGTTVLVVSATDND-VGLNAQITYSLGEDGDHPAEFT----- 890
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I+P T I+ + LDRE GY LT+ A D G PP
Sbjct: 891 -----------INPQTGA----IITTRTLDRETTS-GYLLTVTARDGGNPP 925
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 13/110 (11%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F Y A++KE+ +G+ VITLKA D D G N+ + YS++ +G G I +E
Sbjct: 398 HAPTFEMNEYDASIKESVSVGSTVITLKATDQD-VGKNADVEYSIQSINGGG---ISSEE 453
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
N KIDP T I +LDRE + Y L + A D +P
Sbjct: 454 EDNK----AFKIDPKTGV----ITTRLMLDRETTEV-YTLIVAATDLASP 494
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 16/112 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F ++Q +++EN P G ++ ++A DAD G N+ I Y++ D +G T D
Sbjct: 622 NAPRFYTSLFQESIQENAPAGYSIVKVQAYDAD-EGPNADIKYTIAPRDSIGASTED--- 677
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P +D T I K LDRE + + A D+GTPP+
Sbjct: 678 -------FPLTVDSHTGW----ITTTKELDREDQS-KFMFQVIATDQGTPPQ 717
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 51/111 (45%), Gaps = 23/111 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL-GYFTIDNE 60
N PVF Y +V E+ +GT V+ + A DAD G+N KISYS+ D G F ID
Sbjct: 942 NYPVFKQAAYSGSVLEDALVGTSVVQVSATDAD-VGLNGKISYSLSEKDKEDGSFVID-- 998
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
PT T K LDRE + Y L A+D+G+P
Sbjct: 999 ---------PTSGVIRTNKG---------LDRESVAV-YELEAYAIDRGSP 1030
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N PVF +Y++ V E+ P GT V T+ A DAD ++++ Y + G+ G F I ++
Sbjct: 733 NDPVFEPKIYESVVSEDDPPGTPVATVTATDADE---DTRLHYELTNGNTRGRFAITSQ 788
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 20/109 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F + EN PIG+ V + A D D G+N+ + YS+ GG+ F++
Sbjct: 1050 PAFDSDKIVLYIAENSPIGSTVGEIHAKDPD-EGVNAIVQYSIIGGEDSQSFSLVTR--- 1105
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PG++K + ++ + LD E A ++L +RA +PP
Sbjct: 1106 -----------PGSEKAD--LLTMTELDYESAKKKFDLIIRA---ASPP 1138
>gi|260788463|ref|XP_002589269.1| hypothetical protein BRAFLDRAFT_130073 [Branchiostoma floridae]
gi|229274445|gb|EEN45280.1| hypothetical protein BRAFLDRAFT_130073 [Branchiostoma floridae]
Length = 2821
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 41/115 (35%), Positives = 53/115 (46%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDNE 60
NAPVF Y +V+E+ GT V + A DAD G N +I Y+ GGD G F ID
Sbjct: 959 NAPVFLLESYSGSVREDCSRGTSVTQISATDAD-SGTNGQIRYTFTGGDNGEDAFVIDER 1017
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I K LDRE+ P+ YNL A D+G P ++T
Sbjct: 1018 SGI--------------------IRTDKRLDRELIPV-YNLVAYAEDQGQPEQKT 1051
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 21/112 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F + Y+ V E IG+ V+T++A D D G NS I YS+ I+ G
Sbjct: 441 PEFEENSYREAVLEGIEIGSNVLTVRATDQD-IGPNSDIRYSI----------INPSGTN 489
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
F+I +++ I + LDRE Y L +RA D+GTPPR +
Sbjct: 490 TAFQI---------SRRDGVITTTEALDRETTA-SYRLEVRASDQGTPPRTS 531
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y V EN T++ T+ A D D G NS+I YS+ GG+ G+FTID+
Sbjct: 545 NEPQFEQQSYAKDVPENVRPDTVIQTVAATDPDE-GTNSQIRYSLIGGNSQGHFTIDSAT 603
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+I V+ LD E P Y L ++A D G P
Sbjct: 604 G--------------------DISVITNLDFESTPR-YRLIVKAQDSGRP 632
Score = 42.7 bits (99), Expect = 0.052, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 27/115 (23%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF Y V E+ PIGT ++ + A D D G N++ISYS+ L
Sbjct: 859 PVFQQSPYSVYVDEDVPIGTTILVVSATDGD-EGENARISYSM--------------DIL 903
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR--ETY 116
N F I P+ TK++ LD E A + +++ A D G P + E+Y
Sbjct: 904 NAFEIEPSTGAIKTKQR---------LDHE-AQASFAVSVTATDHGVPSKFDESY 948
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY V E+ GT V+T+ A DAD G +SY + GG+ F+I ++
Sbjct: 755 NAPVFNPKVYYINVPEDANPGTSVLTVTANDADEVG---TVSYQITGGNVRNRFSITSQN 811
Query: 62 PL 63
L
Sbjct: 812 GL 813
>gi|195429581|ref|XP_002062836.1| GK19483 [Drosophila willistoni]
gi|194158921|gb|EDW73822.1| GK19483 [Drosophila willistoni]
Length = 3590
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/112 (37%), Positives = 59/112 (52%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDNE 60
NAP+F + +YQ+++ E+ +GT VI + A+D D G+N +I Y + D G F ID
Sbjct: 997 NAPMFKNPLYQSSILEDALVGTSVIQVSASDPD-IGLNGRIKYLLSDRDVEDGSFVID-- 1053
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PT GT + K LDRE + Y+LT AVDKG+PP
Sbjct: 1054 ---------PTS---GTIRTN------KGLDRESVAI-YHLTAIAVDKGSPP 1086
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 17/109 (15%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP+F + Y ++V E+ P+GT V+ + A D+D G+N++I+YS L +I+ G
Sbjct: 888 APIFENAPYSSSVFEDAPVGTTVLVVSATDSD-VGINAQITYS------LNEESINGLGT 940
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ F I ++ IV LDRE GY LT+ A D G P
Sbjct: 941 ADPFSI---------NQQTGAIVTNAPLDRETTS-GYLLTVTAKDGGNP 979
Score = 45.1 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F +Q +V EN P+G +I ++A D+D G N++ISYS+ D DN
Sbjct: 679 NAPRFYTSQFQESVLENVPVGYNIIRVQAYDSD-EGANAEISYSISERD-------DN-- 728
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P +DP T + +K LDRE + + A D G PP+
Sbjct: 729 -------FPLAVDPRTGW----VQTIKQLDRE-EQSRFTFQVVAKDGGVPPK 768
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 15/119 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG-GDGLGYFTIDNE 60
++P F ++A+++E +G+ VITL+A D D G N++I Y + DG G E
Sbjct: 454 HSPTFEAEQFEASIREGATVGSTVITLRATDQD-IGKNAEIEYGIEAVTDGSG-LAQTQE 511
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
P+ FRI + I LDRE + YNL + A D + E AT
Sbjct: 512 MPI--FRI---------DSRSGVISTRSSLDRETSD-SYNLVVTASDMASAQSERKTAT 558
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F+ Y+A V E+QP GT V T+ A D P +S++ Y + G+ G F I ++
Sbjct: 784 NDPNFNPKYYEANVGEDQPPGTPVTTVTATD---PDEDSRLHYEISTGNTRGRFAITSQ 839
Score = 38.9 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT-IDNEGP 62
P F+ V EN P+G++V + A D D G+N+ + YS+ GGD F+ + G
Sbjct: 1105 PTFASDKITLYVPENSPVGSVVGEIHAHDPD-EGVNAVVHYSIIGGDDSNAFSLVTRPGS 1163
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVV 86
+ T++D + +K + +VV
Sbjct: 1164 ERAQLLTMTELDYESSRKRFELVV 1187
Score = 38.9 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 25/115 (21%)
Query: 2 NAPVFSDFVYQATVKENQ---PIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P FS+ Y V E+Q V ++A DAD G N+ I Y++ GG+ F+ID
Sbjct: 571 NYPQFSERTYTVQVPEDQWGSSEDNTVAHIRATDADQ-GNNAAIRYAIIGGNTQSQFSID 629
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ ++ ++K LD E + Y L +RA D G+P R
Sbjct: 630 SMSG--------------------DVSLVKPLDYE-SVRSYRLVIRAQDGGSPSR 663
>gi|194748038|ref|XP_001956456.1| GF24581 [Drosophila ananassae]
gi|190623738|gb|EDV39262.1| GF24581 [Drosophila ananassae]
Length = 2191
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F +Y+ + E+ +G+ ++ + A D D +N ++YS+ GD +G F+ID
Sbjct: 873 NSPKFQQNLYRVNINEDVLVGSKILDVNATDED-SDVNGLVTYSIERGDHIGQFSID--- 928
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+K I + + LDRE YNL ++A D+G P R
Sbjct: 929 -----------------RKNGTIAISRPLDRETIS-HYNLEIQACDQGAPQR 962
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS+ Y ++EN+P+G + +T K +DAD + ++ +R G+ G F + +G
Sbjct: 978 NAPLFSNANYSIMLQENRPLGYVFLTFKVSDADESPNTTPYTFDIRSGNEGGLFRLGQDG 1037
Query: 62 PLN 64
L+
Sbjct: 1038 SLS 1040
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y+ +V E+ + TL+ + A D D G+N +I YS+ G +
Sbjct: 664 NIPVFSMNQYRVSVPEDAQLNTLITKVHAVDKD-FGINRQIKYSLMGENH---------- 712
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ FRI T G K E N LDRE L +NLT++A D G P
Sbjct: 713 --DFFRISKTT---GIIKLEKN------LDRESISL-FNLTVKAEDYGIP 750
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS Y V EN GT V + AA D G+N+ I Y + G+ G F++D+
Sbjct: 768 NPPEFSMRQYSCKVFENATQGTDVCKVYAASIDI-GVNADIRYYIMSGNEQGKFSMDSMS 826
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
H + + LD E++ Y LT++A+D GTPP
Sbjct: 827 --GHLTLNAS------------------LDYEMSKF-YFLTIQAIDGGTPP 856
Score = 36.2 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 46/113 (40%), Gaps = 20/113 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F + Y +V EN ++ + A DAD G N I Y Y D+E
Sbjct: 355 NYPKFDNTFYSVSVAENSEKVNSLVKVSATDAD-AGPNGNIRY---------YLESDSEN 404
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
N F I I G I +L LLDRE+ YN + A D G P +
Sbjct: 405 IQNIFDI---DIYTGW------ITLLTLLDREVQS-EYNFKVIASDNGRPKHD 447
>gi|91090474|ref|XP_968232.1| PREDICTED: similar to cadherin [Tribolium castaneum]
Length = 3246
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 23/111 (20%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNEG 61
APVF + Y A+V E+ +GT V+ + A D D G+N++I+YS+ GD FT
Sbjct: 837 APVFENAPYTASVFEDAAVGTTVLVVSATDND-VGLNAQITYSLGEDGDHPAEFT----- 890
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I+P T I+ + LDRE GY LT+ A D G PP
Sbjct: 891 -----------INPQTGA----IITTRTLDRETTS-GYLLTVTARDGGNPP 925
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 13/110 (11%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F Y A++KE+ +G+ VITLKA D D G N+ + YS++ +G G I +E
Sbjct: 398 HAPTFEMNEYDASIKESVSVGSTVITLKATDQD-VGKNADVEYSIQSINGGG---ISSEE 453
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
N KIDP T I +LDRE + Y L + A D +P
Sbjct: 454 EDNK----AFKIDPKTGV----ITTRLMLDRETTEV-YTLIVAATDLASP 494
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 16/112 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F ++Q +++EN P G ++ ++A DAD G N+ I Y++ D +G T D
Sbjct: 622 NAPRFYTSLFQESIQENAPAGYSIVKVQAYDAD-EGPNADIKYTIAPRDSIGASTED--- 677
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P +D T I K LDRE + + A D+GTPP+
Sbjct: 678 -------FPLTVDSHTGW----ITTTKELDREDQS-KFMFQVIATDQGTPPQ 717
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 51/111 (45%), Gaps = 23/111 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL-GYFTIDNE 60
N PVF Y +V E+ +GT V+ + A DAD G+N KISYS+ D G F ID
Sbjct: 942 NYPVFKQAAYSGSVLEDALVGTSVVQVSATDAD-VGLNGKISYSLSEKDKEDGSFVID-- 998
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
PT T K LDRE + Y L A+D+G+P
Sbjct: 999 ---------PTSGVIRTNKG---------LDRESVAV-YELEAYAIDRGSP 1030
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N PVF +Y++ V E+ P GT V T+ A DAD ++++ Y + G+ G F I ++
Sbjct: 733 NDPVFEPKIYESVVSEDDPPGTPVATVTATDADE---DTRLHYELTNGNTRGRFAITSQ 788
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 20/109 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F + EN PIG+ V + A D D G+N+ + YS+ GG+ F++
Sbjct: 1050 PAFDSDKIVLYIAENSPIGSTVGEIHAKDPD-EGVNAIVQYSIIGGEDSQSFSLVTR--- 1105
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PG++K + ++ + LD E A ++L +RA +PP
Sbjct: 1106 -----------PGSEKAD--LLTMTELDYESAKKKFDLIIRA---ASPP 1138
>gi|348514385|ref|XP_003444721.1| PREDICTED: protocadherin beta-16-like [Oreochromis niloticus]
Length = 530
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/45 (55%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAPVF+ VY+AT+ EN P GT VIT++A+D D G N +ISY++
Sbjct: 227 NAPVFTKPVYKATITENSPAGTSVITVRASDKD-GGSNGEISYAI 270
>gi|449473946|ref|XP_004176368.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Taeniopygia guttata]
Length = 3621
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 53/115 (46%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
NAP F YQ + E+ P T V+ + A D D N ++ Y+ + G DG G FTI+
Sbjct: 470 NAPQFVSPHYQGMISEDAPPFTSVLQISATDRD-AHTNGRVQYTFQNGEDGDGDFTIEPT 528
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I ++ LDRE P+ Y LT AVD+G PP+ T
Sbjct: 529 SGI--------------------IRTVRRLDRENVPV-YELTAYAVDRGIPPQRT 562
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN-- 59
+AP+F +Q +V EN P+G VI ++A DAD G NS++ Y + G F +++
Sbjct: 160 HAPIFVSTPFQISVLENAPLGHSVIHIQAVDAD-YGENSRLEYKLTGVSADTPFVVNSAT 218
Query: 60 -----EGPLN 64
GPL+
Sbjct: 219 GWITVSGPLD 228
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y + E+ +GT V+++ A D D +NS I+Y + GG+ F+I +G
Sbjct: 265 NRPEFTQKEYFIRLNEDAAVGTSVLSVTAVDRD---VNSAITYQITGGNTRNRFSISTQG 321
Query: 62 PL 63
L
Sbjct: 322 GL 323
Score = 38.9 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 24/110 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF Y ++ E++P+G+ V+ + A D D G N++I+Y + E +
Sbjct: 369 PVFQSAHYSVSINEDRPVGSTVVVISATD-DDVGENARITYYL-------------EDNV 414
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
FRI P D G I + LD E + Y L + A D G P +
Sbjct: 415 PQFRIDP---DSGA------ITLQAELDYE-DQVTYTLAITAKDNGIPQK 454
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAPVF ++ VKEN +G++V + A D D G N++I Y + G+ F +D
Sbjct: 576 NAPVFPAEEFEVRVKENSIVGSVVAQITAVDPD-EGPNAQIMYQIVEGNIPEIFQMD 631
>gi|195383702|ref|XP_002050565.1| GJ22222 [Drosophila virilis]
gi|194145362|gb|EDW61758.1| GJ22222 [Drosophila virilis]
Length = 3596
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 19/110 (17%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP+F + Y A+V E+ P+GT V+ + A D+D G+N++I+YS+ NE
Sbjct: 894 APIFENAPYSASVFEDAPVGTTVLVVSATDSD-VGINAQITYSL------------NEES 940
Query: 63 LNHFRIV-PTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+N P I+P T I+ LDRE GY LT+ A D G P
Sbjct: 941 INGLSSPDPFTINPQTGA----IITSAPLDRETTS-GYLLTVTAKDGGNP 985
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/112 (37%), Positives = 58/112 (51%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDNE 60
NAP F + +YQ+++ E+ +GT VI + A+D D G+N +I Y + D G F ID
Sbjct: 1003 NAPAFKNPLYQSSILEDALVGTSVIQVSASDPD-IGLNGRIKYLLSDRDVEDGSFVID-- 1059
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PT GT + K LDRE + Y+LT AVDKG+PP
Sbjct: 1060 ---------PTS---GTIRTN------KGLDRESVAI-YHLTAIAVDKGSPP 1092
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F +Q +V EN P+G +I ++A D+D G N++ISYS+ D DN
Sbjct: 685 NAPRFYTSQFQESVLENVPVGYNIIRVQAYDSD-EGANAEISYSISERD-------DN-- 734
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P +D T + +K LDRE + + A D G PP+
Sbjct: 735 -------FPLAVDSRTGW----VQTIKPLDRE-EQSRFAFQVVAKDGGVPPK 774
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F+ Y+A V E+QP GT V T+ A D P +S++ Y + G+ G F I ++
Sbjct: 790 NDPSFNPKYYEANVGEDQPPGTPVTTVTATD---PDEDSRLHYEISTGNTRGRFAITSQ 845
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT-IDNEGP 62
P F+ V EN P+G++V + A D D G+N+ + YS+ GGD F+ + G
Sbjct: 1111 PTFASDKITLYVPENSPVGSVVGEIHAHDPD-EGVNAVVHYSIIGGDDSNSFSLVTRPGS 1169
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVV 86
+ T++D + +K + +VV
Sbjct: 1170 ERAQLLTMTELDYESSRKRFELVV 1193
Score = 39.3 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 15/119 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG-GDGLGYFTIDNE 60
++P F ++A+++E +G+ VITL+A D D G N++I Y + DG G D E
Sbjct: 462 HSPTFEAEQFEASIREGATVGSTVITLRATDQD-IGKNAEIEYGIETVTDGSG-VAQDQE 519
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
P+ FRI + I LDRE + Y+L + A D E AT
Sbjct: 520 LPI--FRI---------DSRSGVISTRSSLDRETSD-SYHLLVTASDMAAAQSERKTAT 566
Score = 38.5 bits (88), Expect = 0.97, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 23/113 (20%)
Query: 2 NAPVFSDFVYQATVKENQ-PIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P FS+ Y V E+Q V ++A DAD G N+ I Y++ GG+ F+ID+
Sbjct: 579 NYPQFSERTYTVQVPEDQWGDDNNVAHIRATDADQ-GNNAAIRYAIIGGNTQSQFSIDSM 637
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
++ ++K LD E + Y L +RA D G+P R
Sbjct: 638 SG--------------------DVSLVKPLDYE-SVRSYRLVIRAQDGGSPSR 669
>gi|116110522|gb|ABJ74640.1| stan [Drosophila miranda]
Length = 549
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 59/112 (52%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDNE 60
NAPVF + +YQ+++ E+ +GT VI + A+D D G+N +I Y + D G F ID
Sbjct: 189 NAPVFKNPLYQSSILEDALVGTSVIQVSASDPD-IGLNGRIKYLLSDRDVEDGSFAID-- 245
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PT GT + K LDRE + Y+LT AVDKG+PP
Sbjct: 246 ---------PTS---GTVRTN------KGLDRESVAV-YHLTAIAVDKGSPP 278
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 57/110 (51%), Gaps = 19/110 (17%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP+F + Y A+V E+ P+GT V+ + A D+D G+N++I+YS+ NE
Sbjct: 80 APIFENAPYSASVFEDAPVGTTVLVVSATDSD-VGINAQITYSL------------NEES 126
Query: 63 LNHF-RIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+N P I+P T IV LDRE GY LT+ A D G+P
Sbjct: 127 INGLGSPDPFSINPQTGA----IVTNAPLDRETTS-GYLLTVTAKDGGSP 171
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT-IDNEGP 62
P F+ V EN P+G++V + A D D G+N+ + YS+ GGD F+ + G
Sbjct: 297 PTFASDKITLYVPENSPVGSVVGEIHAHDPD-EGVNAVVHYSIIGGDDSNSFSLVTRPGS 355
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVV 86
+ T++D + +K + +VV
Sbjct: 356 ERAQLLTMTELDYESSRKRFELVV 379
>gi|116110520|gb|ABJ74639.1| stan [Drosophila miranda]
Length = 549
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 59/112 (52%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDNE 60
NAPVF + +YQ+++ E+ +GT VI + A+D D G+N +I Y + D G F ID
Sbjct: 189 NAPVFKNPLYQSSILEDALVGTSVIQVSASDPD-IGLNGRIKYLLSDRDVEDGSFAID-- 245
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PT GT + K LDRE + Y+LT AVDKG+PP
Sbjct: 246 ---------PTS---GTVRTN------KGLDRESVAV-YHLTAIAVDKGSPP 278
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 19/110 (17%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP+F + Y A+V E+ P+GT V+ + A D+D G+N++I+YS+ NE
Sbjct: 80 APIFENAPYSASVFEDAPVGTTVLVVSATDSD-VGINAQITYSL------------NEES 126
Query: 63 LNHF-RIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+N P I+P T IV LDRE A GY LT+ A D G+P
Sbjct: 127 INGLGSPDPFSINPQTGA----IVTNAPLDRETAS-GYLLTVTAKDGGSP 171
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT-IDNEGP 62
P F+ V EN P+G++V + A D D G+N+ + YS+ GGD F+ + GP
Sbjct: 297 PTFASDKITLYVPENSPVGSVVGEIHAHDPD-EGVNAVVHYSIIGGDDSNSFSLVTRPGP 355
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVV 86
+ T++D + +K + +VV
Sbjct: 356 ERAQLLTMTELDYESSRKRFELVV 379
>gi|410913723|ref|XP_003970338.1| PREDICTED: protocadherin Fat 1-like [Takifugu rubripes]
Length = 1748
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 56/117 (47%), Gaps = 19/117 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS VY T+ EN P+G+ V+ + A D D G N ++SYS N
Sbjct: 1179 NTPVFSKDVYSVTLPENAPLGSAVVQVNATDLD-EGQNGEVSYS-----------FGNSV 1226
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
N F++ I+P T + I V L+D E Y + + A DKG PP T K+
Sbjct: 1227 SNNIFQLF--GINPSTGE----ITVKGLIDYEQKD-KYEIEIEASDKGLPPLTTEKS 1276
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 24/44 (54%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
NAPVFS VY + EN PIGT VI + A DAD G N ++ YS
Sbjct: 230 NAPVFSKDVYSVMLHENSPIGTTVIQVNATDAD-DGPNGEVVYS 272
>gi|119514200|gb|ABL75863.1| protocadherin 2A23 [Takifugu rubripes]
Length = 938
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 56/117 (47%), Gaps = 19/117 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS VY T+ EN P+G+ V+ + A D D G N ++SYS N
Sbjct: 239 NTPVFSKDVYSVTLPENAPLGSAVVQVNATDLD-EGQNGEVSYS-----------FGNSV 286
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
N F++ I+P T + I V L+D E Y + + A DKG PP T K+
Sbjct: 287 SNNIFQLF--GINPSTGE----ITVKGLIDYEQKD-KYEIEIEASDKGLPPLTTEKS 336
>gi|410913749|ref|XP_003970351.1| PREDICTED: uncharacterized protein LOC101077501 [Takifugu rubripes]
Length = 14186
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
N PVFS VY+A+++EN P+GTL++TL A DAD G+N ++ Y
Sbjct: 4343 NVPVFSQAVYKASLQENSPVGTLILTLTATDAD-EGVNGEVVY 4384
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR--GGDGLGYFTID 58
NAPVF+ VY+A++ EN IGT V+T+ A DAD G+N I+YS+ G FTID
Sbjct: 13616 NAPVFNQSVYKASIMENTKIGTNVVTVNATDAD-SGINGLITYSLSKMKGGAAEIFTID 13673
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 75/201 (37%), Gaps = 87/201 (43%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS---------------- 45
NAPVF VY+A + EN +GT+V+T+ A+DAD G+N +++Y
Sbjct: 2705 NAPVFEQAVYKADLPENAALGTVVLTVSASDAD-EGVNGEVTYEFSRISDKAKKVFTLNS 2763
Query: 46 ----------------------VRGGDGLGYFT----------IDNEGPLNHFRI----V 69
+ DG G T +++ P+ H + V
Sbjct: 2764 KTGEIKVSGPLDFESNPNYEMRINANDGFGLSTDSKLMIKITDVNDNAPVIHVKSLIDPV 2823
Query: 70 PTKIDPGTK---------------------------------KKEYNIVVLKLLDREIAP 96
P + PG++ K Y++V LDRE+
Sbjct: 2824 PEDVSPGSEVGIINVQDRDSENNRQVRCSIQQNVPFKLVPSIKNYYSLVTTGQLDRELVS 2883
Query: 97 LGYNLTLRAVDKGTPPRETYK 117
YN+T+ A D+G+PP + K
Sbjct: 2884 -DYNITISATDEGSPPLSSSK 2903
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
NAPVF+ +Y+ATV EN P GTL++T+ A+D D G N K++YS
Sbjct: 12010 NAPVFNQSLYKATVTENAPKGTLIMTVNASDID-SGSNGKVTYS 12052
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVFS VY+A++ EN P+ T+V+ + A DAD G+NS+I+Y
Sbjct: 5160 NAPVFSQAVYKASLPENSPLDTVVMQVSATDAD-EGVNSEITY 5201
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVFS VY+A++ EN P+ T+V+ + A DAD G+N +I+Y
Sbjct: 3541 NAPVFSQAVYKASLPENSPLDTVVMQVSATDAD-EGVNKEITY 3582
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVFS VY+A++ EN P+ T+V+ + A DAD G+N +I+Y
Sbjct: 1075 NAPVFSQAVYKASLPENSPLDTVVMQVSATDAD-EGVNREITY 1116
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR--GGDGLGYFTID 58
NAPVF+ VY+A++ EN IG+ V+T+ A DAD G+ I+YS+ G FTID
Sbjct: 12806 NAPVFNQSVYKASIMENTKIGSNVVTVNATDAD-SGIYGLITYSLSKMKGGAAEIFTID 12863
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 20/106 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS VY+A++ EN P+ T+V+ + A DAD G+N ++Y G+ + E
Sbjct: 7392 NAPVFSQAVYKASLPENSPVDTVVMQVSATDAD-EGVNGDVTYE------FGHVS---ED 7441
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
N F I KK I V+ ++D E + Y + ++A D
Sbjct: 7442 VKNVFSI---------DKKSGQIKVISVIDYE-SESSYEIRVKAKD 7477
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 20/106 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS VY+A++ EN P+ T+V+ + A DAD G+N ++Y G+ + E
Sbjct: 8181 NAPVFSQAVYKASLPENSPVDTVVMQVSATDAD-EGVNGDVTYE------FGHVS---ED 8230
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
N F I KK I V+ ++D E + Y + ++A D
Sbjct: 8231 VKNVFSI---------DKKSGQIKVISVIDYE-SESSYEIRVKAKD 8266
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVF VY+A + EN +GT+V+T+ A+DAD G+N +++Y
Sbjct: 1916 NAPVFEQAVYKANLPENAALGTVVLTVSASDAD-EGVNGEVTY 1957
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 20/106 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS VY+A++ EN P+ T+V+ + A DAD G+N ++Y G+ + E
Sbjct: 5948 NAPVFSQAVYKASLPENSPLDTVVMQVSATDAD-EGVNGDVTYE------FGHVS---ED 5997
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
N F I KK I V+ ++D E + Y + ++A D
Sbjct: 5998 VKNVFSI---------DKKSGQIKVISVIDYE-SESSYEIRVKAKD 6033
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVF VY+A + EN +GT+V+T+ A+DAD G+N +++Y
Sbjct: 297 NAPVFEQAVYKADLPENAALGTVVLTVSASDAD-EGVNGEVTY 338
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 16/91 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL---GYFTID 58
N P F+ Y A + ENQP+GT V+ ++A D D G N+KI Y + L + TI+
Sbjct: 11535 NPPTFTQREYDANILENQPVGTFVMKIQAVDVD-DGSNAKIMYHISRDSNLETSSFLTIN 11593
Query: 59 NE-GPLN-----------HFRIVPTKIDPGT 77
+E G L HF+I T D G+
Sbjct: 11594 SETGALFTSRLFDYEQSVHFQIKVTVHDGGS 11624
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVFS VY+A++ EN P+ T+V+ + A DAD G+N ++Y
Sbjct: 8956 NAPVFSQAVYKASLPENSPLDTVVMQVSATDAD-EGVNGDVTY 8997
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVFS +Y AT+ EN + T VIT+ A DAD G+N +++Y
Sbjct: 9753 NAPVFSQALYSATLPENSSMNTPVITVSATDAD-EGINGEVTY 9794
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 20/106 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS VY+A++ EN + T+V+ + A DAD G+N ++Y G+ + E
Sbjct: 10542 NAPVFSQAVYKASLPENSHLDTVVMQVSATDAD-EGVNGDVTYE------FGHVS---ED 10591
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
N F I KK I V+ ++D E + Y + ++A D
Sbjct: 10592 VKNVFSI---------DKKSGQIKVISVIDYE-SESSYEIRVKAKD 10627
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PV + + +TV E+ P GT + DAD +GL ++D
Sbjct: 13721 NPPVINVMSFSSTVSEDAPPGTTIAVFNVKDADS------------DKNGLIKCSLD--- 13765
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
R +P KI+ + YN++ + DRE YN+T+ A D GTPP T
Sbjct: 13766 -----RKLPFKIE-SSLTNYYNLISDQFFDRESVS-KYNITVTATDSGTPPLST 13812
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 49/114 (42%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PV + + +T+ E+ P GT + DAD N +I S+
Sbjct: 12911 NPPVINVMSFSSTISEDAPPGTTIAVFNVKDAD-SDKNGQIKCSLD-------------- 12955
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
R +P KI+ + YN++ + DRE YN+T+ A D GTPP T
Sbjct: 12956 -----RKLPFKIE-SSLTNYYNLISDQFFDRESVS-KYNITVTATDSGTPPLST 13002
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
N PVFS VY+A V EN GT++ L A DAD G+ +SYS
Sbjct: 11325 NVPVFSQRVYKAFVMENSARGTVITRLNATDAD-EGVYGAVSYS 11367
Score = 39.3 bits (90), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 5 VFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
VFS VY+A++ EN P+ T+V+ + A DAD +NS+I+Y
Sbjct: 6607 VFSQAVYKASLPENSPLDTVVMQVSATDAD-EAVNSEITY 6645
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 14/106 (13%)
Query: 24 LVITLKAADADPP-----GMNSKISYSVRGGDGLGYFTIDNEGPLNHFRI-------VPT 71
++I + + +PP M+S+I V G +G + + + ++ VP
Sbjct: 4438 VIIDVTDVNDNPPVIYVKSMSSQIPEDVSPGSEVGIINVQDRDSEKNRQVRCSIQGNVPF 4497
Query: 72 KIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
K+ P K Y++V LDRE+ YN+T+ A D+G+PP + K
Sbjct: 4498 KLVPSIKNY-YSLVTTGQLDRELVS-DYNITISATDEGSPPLSSSK 4541
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 20/113 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F + + + E+ +G+ + A DAD G +GL + +
Sbjct: 11901 NAPTFQNNHLEFEISESAALGSRFVLESAYDADV------------GVNGLQDYIL---T 11945
Query: 62 PLNHFRIVPTKIDP-GTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P +HF ++ + P G+K E +V+ K LDRE P +L L AVD G P R
Sbjct: 11946 PNDHF-VLKQHVHPDGSKYAE--MVIEKSLDRETQP-RLSLKLLAVDGGNPQR 11994
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 14/123 (11%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY-----SVRGGDGLGYFT 56
NAP+F Y A + EN GT + T+ A D+D N++ISY + G Y +
Sbjct: 13016 NAPLFEKQSYSAYIVENNSPGTSIFTVSARDSD-WNQNARISYILEETHISGSPISSYLS 13074
Query: 57 IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV---DKGTPPR 113
+++E + I + + KE IVV K D PL N+T++ + PP+
Sbjct: 13075 LNSENGV----ISAARSFDYEQIKELQIVV-KAQDGGSPPLSSNVTVKILIQDQNDNPPQ 13129
Query: 114 ETY 116
Y
Sbjct: 13130 VLY 13132
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 19/128 (14%)
Query: 7 SDFVYQATVKENQPIG-----TLVITLKAADADPPGMNSK-----ISYSVRGGDGLGYFT 56
S+ Y+ VK +G ++I++ + + P +N K + V G +G
Sbjct: 8254 SESSYEIRVKAKDGLGLSSYAKVIISVTDVNDNAPIINIKSLTNPVPEDVSPGSEVGIIN 8313
Query: 57 IDNEGPLNHFRI-------VPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ + N+ ++ VP K+ P K Y++V LDRE+ YN+T+ A D+G
Sbjct: 8314 VQDRDSENNRQVRCSIQQNVPFKLVPSIKNY-YSLVTTGQLDRELVS-DYNITISATDEG 8371
Query: 110 TPPRETYK 117
+PP + K
Sbjct: 8372 SPPLSSSK 8379
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 19/128 (14%)
Query: 7 SDFVYQATVKENQPIG-----TLVITLKAADADPPGMNSK-----ISYSVRGGDGLGYFT 56
S+ Y+ VK +G ++I++ + + P +N K + V G +G
Sbjct: 10615 SESSYEIRVKAKDGLGLSSYAKVIISVTDVNDNAPIINIKSLTNPVPEDVSPGSEVGIIN 10674
Query: 57 IDNEGPLNHFRI-------VPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ + N+ ++ VP K+ P K Y++V LDRE+ YN+T+ A D+G
Sbjct: 10675 VQDRDSENNRQVRCSIQQNVPFKLVPSIKNY-YSLVTTGQLDRELVS-DYNITISATDEG 10732
Query: 110 TPPRETYK 117
+PP + K
Sbjct: 10733 SPPLSSSK 10740
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 14/108 (12%)
Query: 22 GTLVITLKAADADPPGMNSK-----ISYSVRGGDGLGYFTIDNEGPLNHFRI-------V 69
TL+I + + + P + K + V G +G + + N+ ++ V
Sbjct: 1167 ATLIIEITDVNDNAPVIQLKSLTNPVPEDVSPGSEVGIINVQDRDSENNRQVRCSIQQNV 1226
Query: 70 PTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
P K+ P K Y++V LDRE+ YN+T+ A D+G+PP + K
Sbjct: 1227 PFKLVPSIKNY-YSLVTTGQLDRELVS-DYNITISATDEGSPPLSSSK 1272
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 69 VPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VP K+ P K Y++V LDRE+ YN+T+ A D+G+PP + K
Sbjct: 449 VPFKLVPSIKNY-YSLVTTGQLDRELVS-DYNITISATDEGSPPLSSSK 495
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 69 VPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VP K+ P K Y++V LDRE+ YN+T+ A D+G+PP + K
Sbjct: 2068 VPFKLVPSIKNY-YSLVTTGQLDRELVS-DYNITISATDEGSPPLSSSK 2114
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 69 VPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VP K+ P K Y++V LDRE+ YN+T+ A D+G+PP + K
Sbjct: 3692 VPFKLVPSIKNY-YSLVTTGQLDRELVS-DYNITISATDEGSPPLSSSK 3738
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 69 VPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VP K+ P K Y++V LDRE+ YN+T+ A D+G+PP + K
Sbjct: 6100 VPFKLVPSIKNY-YSLVTTGQLDRELVS-DYNITISATDEGSPPLSSSK 6146
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 69 VPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VP K+ P K Y++V LDRE+ YN+T+ A D+G+PP + K
Sbjct: 6755 VPFKLVPSIKNY-YSLVTTGQLDRELVS-DYNITISATDEGSPPLSSSK 6801
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 69 VPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VP K+ P K Y++V LDRE+ YN+T+ A D+G+PP + K
Sbjct: 7544 VPFKLVPSIKNY-YSLVTTGQLDRELVS-DYNITISATDEGSPPLSSSK 7590
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 69 VPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VP K+ P K Y++V LDRE+ YN+T+ A D+G+PP + K
Sbjct: 9108 VPFKLVPSIKNY-YSLVTTGQLDRELVS-DYNITISATDEGSPPLSSSK 9154
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 69 VPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VP K+ P K Y++V LDRE+ YN+T+ A D+G+PP + K
Sbjct: 9905 VPFKLVPSIKNY-YSLVTTGQLDRELVS-DYNITISATDEGSPPLSSSK 9951
>gi|116110500|gb|ABJ74629.1| stan [Drosophila miranda]
gi|116110502|gb|ABJ74630.1| stan [Drosophila miranda]
gi|116110504|gb|ABJ74631.1| stan [Drosophila miranda]
gi|116110506|gb|ABJ74632.1| stan [Drosophila miranda]
gi|116110508|gb|ABJ74633.1| stan [Drosophila miranda]
gi|116110510|gb|ABJ74634.1| stan [Drosophila miranda]
gi|116110512|gb|ABJ74635.1| stan [Drosophila miranda]
gi|116110516|gb|ABJ74637.1| stan [Drosophila miranda]
gi|116110518|gb|ABJ74638.1| stan [Drosophila miranda]
gi|116110524|gb|ABJ74641.1| stan [Drosophila miranda]
gi|116110526|gb|ABJ74642.1| stan [Drosophila miranda]
gi|116110528|gb|ABJ74643.1| stan [Drosophila miranda]
gi|116110530|gb|ABJ74644.1| stan [Drosophila miranda]
gi|116110532|gb|ABJ74645.1| stan [Drosophila miranda]
gi|116110534|gb|ABJ74646.1| stan [Drosophila miranda]
Length = 549
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 59/112 (52%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDNE 60
NAPVF + +YQ+++ E+ +GT VI + A+D D G+N +I Y + D G F ID
Sbjct: 189 NAPVFKNPLYQSSILEDALVGTSVIQVSASDPD-IGLNGRIKYLLSDRDVEDGSFAID-- 245
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PT GT + K LDRE + Y+LT AVDKG+PP
Sbjct: 246 ---------PTS---GTVRTN------KGLDRESVAV-YHLTAIAVDKGSPP 278
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 57/110 (51%), Gaps = 19/110 (17%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP+F + Y A+V E+ P+GT V+ + A D+D G+N++I+YS+ NE
Sbjct: 80 APIFENAPYSASVFEDAPVGTTVLVVSATDSD-VGINAQITYSL------------NEES 126
Query: 63 LNHF-RIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+N P I+P T IV LDRE GY LT+ A D G+P
Sbjct: 127 INGLGSPDPFSINPQTGA----IVTNAPLDRETTS-GYLLTVTAKDGGSP 171
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT-IDNEGP 62
P F+ V EN P+G++V + A D D G+N+ + YS+ GGD F+ + G
Sbjct: 297 PTFASDKITLYVPENSPVGSVVGEIHAHDPD-EGVNAVVHYSIIGGDDSNSFSLVTRPGS 355
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVV 86
+ T++D + +K + +VV
Sbjct: 356 ERAQLLTMTELDYESSRKRFELVV 379
>gi|432891560|ref|XP_004075584.1| PREDICTED: protocadherin-16-like [Oryzias latipes]
Length = 3188
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 25/109 (22%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+F + Y+A + ENQP GT V+T+ A+D+D G+N +I+Y GG G F+I++ +
Sbjct: 1589 PLFEEAQYEAQISENQPAGTTVLTVSASDSD-QGINGQITY---GGISHGAFSINSVTGV 1644
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I K LDRE Y +T+ A D G PP
Sbjct: 1645 --------------------ITTTKSLDRESQDC-YTVTVYAKDGGLPP 1672
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 18/115 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ++KEN GT ++ + A DAD G ++YS+ G + +
Sbjct: 563 NEPVFERNFYNVSIKENTAPGTCILEVTAVDAD-GGTFGSVTYSLASGSNIAISS----- 616
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
F I K+ I +LDR+ P ++ T+ AVD G E Y
Sbjct: 617 ---QFTI---------GKETGQICTNAVLDRDQGPDSFDFTVMAVDGGGLSSEAY 659
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF Y TV E+ GT+V T++A+ G++ ISY++ GD GYFT+D
Sbjct: 777 PVFEQTQYHFTVSEDALRGTMVGTVQASSK--TGISRDISYAISSGDPTGYFTVD 829
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F Y V ENQ L TL+A D D G + +I+Y + GD G F +D
Sbjct: 1689 NAPIFGRLYYNVEVPENQEALPL-FTLRATDPD-AGSSGEINYRIAAGDPSGDFHLD--- 1743
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
H ++ T + LDRE GY+LT+ A D+G P
Sbjct: 1744 --RHSGVLSTS---------------RPLDRE-KTAGYSLTIVAQDQGRP 1775
Score = 42.0 bits (97), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 10/110 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F Y ATV E+ +G+ V+TL D D N +++ G+ F I++
Sbjct: 2376 NAPIFKQSKYTATVSEDGLLGSTVLTLDPVDGDLFRDNCGFDFAIASGNLGNAFQIESS- 2434
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
HF ++ + ++++++ LD E P YNLT+ D+G P
Sbjct: 2435 --VHF------LEGRGFQTVGSLILVEKLDFEALP-SYNLTVVVSDRGIP 2475
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP F+ +YQ TV E+ P G+ +IT+ A D D G N KI+Y V G F ID
Sbjct: 2271 NAPSFTHDLYQVTVVEHLPAGSAIITVTATDRD-SGNNGKITYRVMSTTK-GIFYID 2325
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 25/117 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N PVF +V E+Q +G +V+ + A DAD G N +++Y ++ G+ G F+++ N
Sbjct: 1483 NLPVFMSPT-AVSVMEDQTMGFVVLFVIARDAD-QGENGRVTYRIQSGNTRGTFSLNSNT 1540
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
G L+ + K LDRE + +NLT+ A D G P + +
Sbjct: 1541 GSLS---------------------ISKPLDREEQDV-FNLTIVAEDHGIPQHSSSQ 1575
Score = 38.9 bits (89), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F Y A + E PIG+LV+ +KA DAD G NS++ Y + G + +N G
Sbjct: 1793 NSPQFQSNSYTADISEGVPIGSLVLEVKARDAD-FGPNSQVMYFLSRGSKSMFVIDENTG 1851
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
NAPVF Y + EN G ++ + A+D+D G N +SY + R D YF ID+
Sbjct: 239 NAPVFQQSRYHTIISENLQPGNSILQVFASDSD-EGQNGMVSYEINRRQSDPDQYFVIDS 297
Query: 60 E 60
Sbjct: 298 H 298
>gi|149640328|ref|XP_001510683.1| PREDICTED: protocadherin gamma-A10-like [Ornithorhynchus anatinus]
Length = 809
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
NAPVF+ VYQ V+E+ P+GT V+T+ A D D G+N+++SYS R
Sbjct: 238 NAPVFTQSVYQVMVREDAPVGTRVLTVNATDLD-EGVNAEVSYSFR 282
>gi|116110498|gb|ABJ74628.1| stan [Drosophila pseudoobscura]
Length = 549
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 59/112 (52%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDNE 60
NAPVF + +YQ+++ E+ +GT VI + A+D D G+N +I Y + D G F ID
Sbjct: 189 NAPVFKNPLYQSSILEDALVGTSVIQVSASDPD-IGLNGRIKYLLSDRDVEDGSFVID-- 245
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PT GT + K LDRE + Y+LT AVDKG+PP
Sbjct: 246 ---------PTS---GTVRTN------KGLDRESVAV-YHLTAIAVDKGSPP 278
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 57/110 (51%), Gaps = 19/110 (17%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP+F + Y A+V E+ P+GT V+ + A D+D G+N++I+YS+ NE
Sbjct: 80 APIFENAPYSASVFEDAPVGTTVLVVSATDSD-VGINAQITYSL------------NEES 126
Query: 63 LNHF-RIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+N P I+P T IV LDRE GY LT+ A D G+P
Sbjct: 127 INGLGSPDPFSINPQTGA----IVTNAPLDRETTS-GYLLTVTAKDGGSP 171
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT-IDNEGP 62
P F+ V EN P+G++V + A D D G+N+ + YS+ GGD F+ + G
Sbjct: 297 PTFASDKITLYVPENSPVGSVVGEIHAHDPD-EGVNAVVHYSIIGGDDSNSFSLVTRPGS 355
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVV 86
+ T++D + +K + +VV
Sbjct: 356 ERAQLLTMTELDYESSRKRFELVV 379
>gi|116110496|gb|ABJ74627.1| stan [Drosophila affinis]
Length = 549
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 59/112 (52%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDNE 60
NAPVF + +YQ+++ E+ +GT VI + A+D D G+N +I Y + D G F ID
Sbjct: 189 NAPVFKNPLYQSSILEDALVGTSVIQVSASDPD-IGLNGRIKYLLSDRDVEDGSFVID-- 245
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PT GT + K LDRE + Y+LT AVDKG+PP
Sbjct: 246 ---------PTS---GTVRTN------KGLDRESVAV-YHLTAIAVDKGSPP 278
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 19/110 (17%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP+F + Y A+V E+ P+GT V+ + A D+D G+N++I+YS+ NE
Sbjct: 80 APIFENAPYSASVFEDAPVGTTVLVVSATDSD-VGINAQITYSL------------NEES 126
Query: 63 LNHF-RIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+N P I+P T I+ LDRE GY LT+ A D G+P
Sbjct: 127 INGLGSPDPFSINPQTGA----IITNAPLDRETTS-GYLLTVTAKDGGSP 171
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT-IDNEGP 62
P F+ V EN P+G++V + A D D G+N+ + YS+ GGD F+ + G
Sbjct: 297 PTFASDKITLYVPENSPVGSVVGEIHAHDPD-EGVNAVVHYSIIGGDDSNSFSLVTRPGS 355
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVV 86
+ T++D + +K + +VV
Sbjct: 356 ERAQLLTMTELDYESSRKRFELVV 379
>gi|345328749|ref|XP_003431299.1| PREDICTED: protocadherin-23-like [Ornithorhynchus anatinus]
Length = 3433
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 11/110 (10%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP F+ Y +V E+ IG+L+ T A D D N+ + YS+ G+ F ++
Sbjct: 2625 APAFTMTHYNFSVSEDAVIGSLLATFSATDHDRTRENTNVDYSIFDGNTQNQFLVET--- 2681
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
RIV ++ + KK ++V+ + LDRE AP + L + A D+G PP
Sbjct: 2682 ----RIVQSEY---SFKKVGHLVLGRTLDRETAP-SHRLVILASDRGHPP 2723
Score = 42.0 bits (97), Expect = 0.078, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG 48
++P F D +V+EN PIGTLV T A D D +N K+ YS+
Sbjct: 1583 HSPSFQDDFIVISVEENVPIGTLVYTFNAKDGDGSFLNGKVQYSIEA 1629
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 13/102 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N PVF + A V+EN +G+ + + A D D G N +++Y++ G+ G F +D +
Sbjct: 2740 NPPVFPTPEHHAHVRENTLLGSPIAVISANDCD-SGTNGEVTYTIISGNEKGCFHVDEKT 2798
Query: 61 GPLN-----------HFRIVPTKIDPGTKKKEYNIVVLKLLD 91
G +N F + D G+K ++++ + +LD
Sbjct: 2799 GAVNLIKSLDYEETTKFTLTVQASDEGSKNVAFSVIFVSVLD 2840
Score = 38.5 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
PVF Y+ TV ENQ G LV ++A D D G+NS++ + + G F I++
Sbjct: 1799 PVFKKLSYEVTVPENQGPGQLVTKVEAMDRD-SGINSELQFEIMPGAFFELFQINS 1853
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 47/120 (39%), Gaps = 28/120 (23%)
Query: 2 NAPVFSDFVYQATVK----ENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N P F F + + E QP V T+ A D D G N ++SYS+ + L +F +
Sbjct: 1368 NKPQFPQFPPENEISIKVLEGQPADVFVTTVFAKDPDA-GNNGEVSYSISSEESLNHFKM 1426
Query: 58 D-NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
D N G + ++ P Y +T+ A D+G PP + Y
Sbjct: 1427 DVNSGEIRTTTVLSYNHQPN----------------------YRMTITARDQGIPPLQGY 1464
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQA+V E Q V+ + A+D D G+N +I YS+ G+ F ID+
Sbjct: 2315 NIPSFEQSNYQASVWEGQLYSAYVLQVSASDMD-SGLNGQIEYSILSGNLNDTFQIDSTS 2373
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ I +LD +A L ++A DKG P
Sbjct: 2374 GV--------------------ITTDAILDHNLAT-SNRLVIQATDKGLP 2402
>gi|296485147|tpg|DAA27262.1| TPA: FAT tumor suppressor homolog 2 [Bos taurus]
Length = 3159
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 51/108 (47%), Gaps = 22/108 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F +Y V EN +G +V+T+ A D D P +NS I+YS+ GG+ LG+F I
Sbjct: 2129 PRFPQHLYSTRVLENAIVGDVVLTVSATDEDGP-VNSAITYSLIGGNQLGHFAI------ 2181
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K+ + V K LD E Y+L LRA D G P
Sbjct: 2182 --------------HPKKGELQVAKALDWEQTS-SYSLKLRATDSGQP 2214
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y+ +V EN G V TLK DAD N +++ + GD LG F I G
Sbjct: 1712 NAPRFASEDYRGSVVENSEPGEPVATLKTLDADIAEQNRQVTCYITEGDPLGQFGISQVG 1771
Query: 62 PLNHFRIVPTK 72
+ +RI K
Sbjct: 1772 --DEWRIFSRK 1780
Score = 40.0 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P FS VY ++ E P T VI L A+D D G N +SY + G D +F I+
Sbjct: 1076 NPPTFSQLVYTTSISEGLPAQTPVIQLLASDQD-SGQNRDVSYQIVEDGSDVSKFFQING 1134
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ ++ LD E A +++ +RA+D+G PP
Sbjct: 1135 STG--------------------EMSTVQELDYE-AQQHFHVKVRAMDRGDPP 1166
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGY 54
N P F Y +V+EN PIG+ V+ L +D D P S+ + +G DG +
Sbjct: 2232 NPPRFFQLNYSTSVQENAPIGSKVLQLILSDPDSPENGPPFSFRITKGNDGFAF 2285
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTID 58
N P+F Y+A + EN P+GT VI + A D D G + ++SY + G + F ID
Sbjct: 1603 NRPIFEADPYKAVLTENMPVGTSVIQVTANDQD-TGDDGQVSYRLPVDPGSNIHELFAID 1661
Query: 59 NE 60
+E
Sbjct: 1662 SE 1663
>gi|116110514|gb|ABJ74636.1| stan [Drosophila miranda]
Length = 549
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 59/112 (52%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDNE 60
NAPVF + +YQ+++ E+ +GT VI + A+D D G+N +I Y + D G F ID
Sbjct: 189 NAPVFKNPLYQSSILEDALVGTSVIQVSASDPD-IGLNGRIKYLLSDRDVEDGSFAID-- 245
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PT GT + K LDRE + Y+LT AVDKG+PP
Sbjct: 246 ---------PTS---GTVRTN------KGLDRESVAV-YHLTAIAVDKGSPP 278
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 57/110 (51%), Gaps = 19/110 (17%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP+F + Y A+V E+ P+GT V+ + A D+D G+N++I+YS+ NE
Sbjct: 80 APIFENAPYSASVFEDAPVGTTVLVVSATDSD-VGINAQITYSL------------NEES 126
Query: 63 LNHF-RIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+N P I+P T IV LDRE GY LT+ A D G+P
Sbjct: 127 INGLGSPDPFSINPQTGA----IVTNAPLDRETTS-GYLLTVTAKDGGSP 171
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT-IDNEGP 62
P F+ V EN P+G++V + A D D G+N+ + YS+ GGD F+ + G
Sbjct: 297 PTFASDKITLYVPENSPVGSVVGEIHAHDPD-EGVNAVVHYSIIGGDDSNSFSLVTRPGS 355
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVV 86
+ T++D + +K + +VV
Sbjct: 356 ERAQLLTMTELDYESSRKRFELVV 379
>gi|47227548|emb|CAG04696.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2289
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 55/118 (46%), Gaps = 24/118 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS + T+ E+ P GT V+ + ++DAD G N ISYS+ GG G
Sbjct: 31 NAPVFSTSTFHTTITEDAPTGTDVLLVNSSDAD-VGNNGVISYSLSGGHG---------- 79
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
F I+P T + I+ +LDRE Y L + A D G P + AT
Sbjct: 80 ---QF-----SINPATGQ----IITSSVLDRE-ERANYQLLVVATDGGQPQGLSSSAT 124
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 47/109 (43%), Gaps = 21/109 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ +Y V E G LV + A D+D S+ SYS+ FTI+
Sbjct: 960 PVFTQELYDVQVSEGLSPGGLVTFVSAEDSDSVPSWSRFSYSIAPESDQKVFTINT---- 1015
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K + V LDRE P+ YNLT+ AVD GTPP
Sbjct: 1016 ----------------KTGQVSVAAPLDRERTPV-YNLTVLAVDTGTPP 1047
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 20/114 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
+ P FS AT+ E+ +GT + TL A D D MN I+Y++ G+ G F+I++
Sbjct: 643 HTPEFSQSQVSATIPESLAVGTAIRTLSARDKD-KDMNGVITYNITSGNDRGLFSINSRS 701
Query: 61 ------GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGY-NLTLRAVD 107
GPL+ +K+++N+ V + IA Y ++T+ D
Sbjct: 702 GVLSLAGPLDF-----------EEKQQHNLRVSAIDGGWIAKTSYVSVTVHVTD 744
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Query: 13 ATVKENQPIGTLVITLKAADAD-PPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPT 71
A V ENQ GT V TL A+DAD PP + + G YF++ G L R
Sbjct: 1073 AEVMENQRAGTAVTTLTASDADLPPNRGPFLFSLLSSGSANSYFSLSQSGALTTSR---- 1128
Query: 72 KIDPGTKKKEYNIVVLK 88
+ID Y VV+K
Sbjct: 1129 EIDREQISDFYLSVVIK 1145
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVF Y V+EN P GT V+ + A D D G N+ ++Y ++ D F ID
Sbjct: 748 NPPVFEPDEYFPVVQENVPSGTTVVKMNAKDGD-SGANAVMAYVIQSSDS-DLFVID 802
>gi|351713328|gb|EHB16247.1| Protocadherin Fat 3 [Heterocephalus glaber]
Length = 3464
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 1757 NAPVFAHEVYRGNVKESDPPGEVVAVLSTWDRDTSDLNCQVSYHITGGNPRGRFAL---- 1812
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 1813 --------------GLVQSEWKVYVKRPLDREEQDI-YFLNITATD 1843
Score = 42.0 bits (97), Expect = 0.078, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+P FS Y A V+EN GT VI ++A D D PG +ISY++ F ID+ G
Sbjct: 1338 SPAFSQSTYVAEVRENAAAGTKVIHVRATDGD-PGTYGQISYAIINDFAKDRFLIDSNG 1395
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D S+S+ G+ F +D G
Sbjct: 2279 NSPVFTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPPFSFSILSGNEEEEFVLDPHG 2338
Query: 62 PL 63
L
Sbjct: 2339 IL 2340
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV + Y A+ E+ P +++ + A DAD G + I YS+ G +F
Sbjct: 1862 NSPVCDEVAYTASFPEDIPSNKIILKVSAKDAD-IGSSGDIQYSLYGSGSNEFF------ 1914
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+DP + + + L LLDRE P YNL RA D G
Sbjct: 1915 -----------LDPESGE----LKTLALLDRERVP-AYNLISRATDGG 1946
Score = 39.3 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N PVF+ +Y++ V E P G V ++A+DAD ++ ++ YS+ G+ F +D++
Sbjct: 1235 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDID-RLEYSILSGNDRTSFLMDSK 1292
Score = 38.1 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ GT V+ + A D G N++I+Y +R G+ G F
Sbjct: 2069 NPPVFERRDYLVTVPEDTSPGTQVLAVFATSKDI-GTNAEITYLIRSGNEQGKF------ 2121
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+I+P T I V + LD E+ Y L + A D GTP
Sbjct: 2122 ----------RINPKTG----GISVSEALDYELCKRFY-LVVEAKDGGTP 2156
Score = 38.1 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P+F Y A V+ + GTL+ + A D D G N +++Y ++ D G+F
Sbjct: 925 NSPIFVGLPYYAAVQVDAEPGTLIYRVTAIDRD-KGANGEVTYVLQ--DDYGHF------ 975
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
KI+P + N+++ + + +++ + Y +T+ A D G P T P
Sbjct: 976 ----------KINPNSG----NVILKEAFNSDLSNIEYEVTVVAKDGGKPSLSTSVELP 1020
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 48/110 (43%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS +Y A + E+ +G VI L A D D N +I +S+ GD DNE
Sbjct: 2174 NPPKFSQDIYSAVISEDALVGDSVILLIAEDIDSQP-NGQIHFSIVSGDR------DNE- 2225
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+DP + + DRE GY+L ++AVD G P
Sbjct: 2226 ---------FAVDPVVGLVKVKKKL----DRERVS-GYSLLVQAVDSGIP 2261
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F++ +Y+A+V E+ +G+ V+ + A D D G N+++ Y++ G N G
Sbjct: 407 HSPYFTNPLYEASVFESAALGSAVLQVTALDKD-KGENAELIYTIEAG---------NTG 456
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F+I P + T KE ++ + + L+++ D+G+PP
Sbjct: 457 --NTFKIEPV-LGIITVSKEPDMTTMG---------QFVLSVKVTDQGSPP 495
Score = 35.8 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL----GYFTI 57
N PVF Y+ + E P+GT + ++A D D G N +++YS+ L F I
Sbjct: 1647 NKPVFETSSYETIIMEGMPVGTKLTQVRATDLD-WGANGQVTYSLHSDSHLEKVMEAFNI 1705
Query: 58 D-NEGPLNHFRIVPTKIDPG 76
D N G ++ + + + DP
Sbjct: 1706 DSNTGWISTLKDLDHETDPA 1725
>gi|345311026|ref|XP_001519720.2| PREDICTED: protocadherin Fat 1-like, partial [Ornithorhynchus
anatinus]
Length = 2269
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 18/92 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS VY+ TV E P G +V L ++DAD MN +++Y + GGD G F ++
Sbjct: 1387 NPPRFSAEVYKGTVSEADPSGGVVAVLSSSDADADEMNRRVTYYITGGDPQGQFAVEQ-- 1444
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
+ E+ + V + LDRE
Sbjct: 1445 ----------------AQDEWRVFVQRALDRE 1460
Score = 42.0 bits (97), Expect = 0.087, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
+AP F+ Y+ V E+ +G+ V+ + A D D G N+++ YS+ G+ FTID
Sbjct: 25 HAPWFTSASYEGQVYESAAVGSQVLQITALDRD-QGENAEVQYSIESGNVGNAFTIDPVL 83
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G L R + + + +EY +VV RAVD+G PP
Sbjct: 84 GSLRTARELDRR-----RHREYTLVV-----------------RAVDRGLPP 113
Score = 38.9 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 25/119 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAPVF+ + ATV EN T + ++A DAD G+N KI Y+ V D +F++D +
Sbjct: 1594 NAPVFTADPFTATVFENTEPRTPLTRIQATDAD-TGLNGKIRYTLVPPAD--SHFSVDAD 1650
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ + + + LDRE+ + + LT+RAVD+G + + AT
Sbjct: 1651 SGI--------------------VWLERSLDREVQAV-HTLTVRAVDRGPAGQLSATAT 1688
Score = 38.1 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 48/111 (43%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y V E+ P+GT V+ + AA D N++I+Y++ GG+ G F +D
Sbjct: 1699 NPPEFEYREYGGAVAEDVPVGTEVLRVYAASRDVEA-NAEITYAIVGGNEHGRFGVD--- 1754
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ V LD E A Y LT+ A D G+PP
Sbjct: 1755 -----------------AATGAVFVSASLDYEQAR-DYCLTVEATDGGSPP 1787
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLG 53
+APVFS Y A V E+ ++T+ A DAD P NS I YS+ G+G G
Sbjct: 1804 HAPVFSQDSYTAVVSEDAAPDQSILTVSADDADGPS-NSLIHYSIVDGNGGG 1854
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS + ++EN+P+G V+ L+A D D +++ G+ G F +D +G
Sbjct: 1910 NPPLFSPANHSIILQENKPVGFSVLQLEARDRDSSHNGPPFVFTIESGNEEGVFRLDADG 1969
Query: 62 PL 63
L
Sbjct: 1970 LL 1971
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 46/111 (41%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y +T+ E +GTLV+ ++AADAD + G GL Y
Sbjct: 754 NPPRFNQMAYASTLSEAAAVGTLVVWVRAADAD-----------LESGRGLTY------- 795
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
H + I ++ LD E A + L +RAVD G PP
Sbjct: 796 ---HLDAGLDDDLFLLDQDSGAITLVGPLDYEQAR-EHQLLIRAVDGGRPP 842
Score = 35.4 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 46/108 (42%), Gaps = 25/108 (23%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP+F Y+A V E+ P + V+ L+A + P G+ ++SY + GD LG F D
Sbjct: 654 APIFEQSFYRAEVPEDAPPRSPVVHLRA--SAPEGL--RVSYRIVDGDPLGQFDADFHTG 709
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGT 110
H V LD E P Y LT+RA D T
Sbjct: 710 TLH--------------------VAAPLDFEAHP-AYKLTVRATDSLT 736
>gi|410917772|ref|XP_003972360.1| PREDICTED: protocadherin-23-like [Takifugu rubripes]
Length = 3262
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 53/111 (47%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y+ V E Q T ++ + A+DAD G+N +I YS+ GD F +D+
Sbjct: 2130 NAPRFDYSSYRTAVWEGQAHNTYIMQVFASDAD-GGINGQIEYSIVSGDPNQAFILDSVR 2188
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I+ T + LLDREI P Y L L+A DKG PP
Sbjct: 2189 G-----ILATNV---------------LLDREITP-SYKLVLQAADKGEPP 2218
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y V+EN +GT ++ + A D D G N + + + G+G G++ +D +
Sbjct: 2556 NAPVFSSTEYHTQVRENSAVGTHLVQVTAQDPD-LGPNGSLKFDIISGNGKGHYKLDPDS 2614
Query: 62 PL 63
L
Sbjct: 2615 GL 2616
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAP FS YQA+V E P G V+ L A D D G N ++YS+ G F++D+
Sbjct: 1820 NAPSFSRKSYQASVSEGLPPGAEVLRLSAFDPD-EGPNGHVTYSLTEDSSHGAFSVDS 1876
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P+F VY TV E+ P ++TL A D D N+ + Y++ G+ F+++
Sbjct: 2440 HVPMFHQEVYSLTVPEDTPTDATLLTLSAEDRDWSPENTHLDYAIIQGNEERRFSLE--- 2496
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
R+V + + +V+ LDRE Y LT+ D+G PP
Sbjct: 2497 ----VRLVQVE---NQWRNVGKLVLCNPLDRETTE-SYVLTVSVADRGIPP 2539
Score = 38.9 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+PVFS +Y A+V EN+ G V+ + A D D N+ + YS+ G G F+I+
Sbjct: 1612 SPVFSQNIYNASVAENRDPGEPVVRVSATDDDSE-ENAVVWYSLLPGPGYELFSINPHTG 1670
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L I LDRE P ++L ++A D G+ P
Sbjct: 1671 L--------------------ITTASYLDREQQP-HFSLRVQARDSGSRP 1699
Score = 38.5 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 13/129 (10%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F ++ ++ EN P G + T +A+D D G N I YS+ G DG G F +++
Sbjct: 1716 NPPRFMQSSFRVSLPENLPPGA-IHTAQASDPDL-GENGTIHYSIAGEDGAGCFVVNSRS 1773
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV----DKGTP--PRET 115
+ + TK+ +K+ Y + + + APL + L+ V + P R++
Sbjct: 1774 GV----VSTTKVLDREEKQNYTLTIWA-RNYGPAPLSSSTQLQLVLLDQNDNAPSFSRKS 1828
Query: 116 YKATPRNGL 124
Y+A+ GL
Sbjct: 1829 YQASVSEGL 1837
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 15/117 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F D + Q + E+ +G+LV +A D D NS + Y + +
Sbjct: 1392 HTPWFPDKLVQLGLSEDAAVGSLVFAFQARDGDGTLPNSAVRYDLT-------YDPKVAD 1444
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
+HF P +IDP T ++ V LDRE AP + T+ A D+ + E +A
Sbjct: 1445 SSSHF---PFEIDPFTG----SLTVATPLDREAAP-SFAFTVTATDQASRKEERKQA 1493
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS YQ + E TLV+++ A D D G+N +I+Y + G++ + G
Sbjct: 2335 NAPVFSKDSYQVDLSELAAADTLVLSVSATDRD-SGLNGEITYRLLSSPSQGFYIQADSG 2393
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 17/115 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF +Y ATV E+ +G+ + + A DAD + + YS+ G F
Sbjct: 553 NEPVFQQQLYNATVPEHSGVGSCFLQVVATDADSREFGT-LLYSLSDG-----FDGQERH 606
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
PL H + P T + + V + +DR++ +++ +RA D G +TY
Sbjct: 607 PLFH-------VQPQTGE----LCVSQDIDRDLGQTVHDILIRAEDPGGLSAQTY 650
Score = 35.4 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVFS VY TV E LV T+ A D D G+N+++SY
Sbjct: 1077 NAPVFSSEVYHFTVSEAPSPQGLVGTVSAVDKD-SGINAQLSY 1118
Score = 35.4 bits (80), Expect = 8.2, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF Y +V E+ P G+ +I ++ DAD G N+ + YS+ + G +I+ E L
Sbjct: 450 PVFEKDAYAVSVPEDAPQGSSLIRMQTRDAD-EGANAAVRYSILRSNQDGLVSIEPESGL 508
>gi|156406024|ref|XP_001641031.1| predicted protein [Nematostella vectensis]
gi|156228168|gb|EDO48968.1| predicted protein [Nematostella vectensis]
Length = 4697
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
AP F + Y A + EN+ IGT V ++A D D P G N+KI YS+ +G GY TID+
Sbjct: 2837 QAPFFPNPPYYAALFENRAIGTNVTVMQAIDNDDPNAGGNTKIIYSLEDNNG-GYVTIDS 2895
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE-IAPLGYNLTLRAVDKGTP 111
L + +K++DRE + + +T+RA D+G P
Sbjct: 2896 SSGL--------------------VTSIKMVDREALQEDSFKVTVRATDQGQP 2928
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 48/109 (44%), Gaps = 21/109 (19%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
APVF+ TV+E+ P V A D DPPG N ++ YS+ G + G F ID +
Sbjct: 346 APVFTRKALATTVREDLPKNGFVFLATATDNDPPGPNQRLLYSLSGPEA-GLFAIDPDSA 404
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ + + LD E P NLT+ A D+G+P
Sbjct: 405 V--------------------VTLAAALDYEKGPTVINLTVTATDQGSP 433
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAP+FS VY+ +++E P GT V+T+ A D D P + I+YS+ G YF I +
Sbjct: 2734 NAPLFSKLVYEVSLREESPAGTSVVTVSAIDIDSPPVQEAITYSI-DKRGEQYFRISS 2790
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 22/113 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N PVF +VKE+ +GT + T KA D D G + ++ YS+ G+G+GY ++
Sbjct: 452 QNLPVFDPKAQAISVKEDTALGTSIFTAKATDED-SGPDGELEYSMVAGEGVGYVILNET 510
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ + + DR+ P+ + + A DKGT PR
Sbjct: 511 TGV--------------------VTTAAMFDRKTNPV-VEVVIAAHDKGTFPR 542
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP FS Y A+V P+ V + A DAD G N++++Y++ GG+ G F I++E
Sbjct: 1389 HAPRFSSSQYLASVPYEFPVNFHVFQVIATDADS-GSNAELTYAITGGNEDGIFKINSEN 1447
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
L V L A + + L+L+A D G P R
Sbjct: 1448 GL---------------------VSLARPLASSAKIKHKLSLKATDNGVPRR 1478
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 50/114 (43%), Gaps = 25/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F+ Y+ + EN P+GT +I + A D D +++YS+ FTID +
Sbjct: 2524 HTPTFNMETYECRIFENSPVGTGIIRVHAEDLD----TGRVTYSLHPSRDYQKFTIDTQ- 2578
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
GT + N VV DRE Y+LT A D G+PP T
Sbjct: 2579 -------------RGTIR---NAVV---FDRE-EESRYSLTAIATDAGSPPFST 2612
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ V++A+V+E+ P+G V+T+KA D D ++S + + GD FTI
Sbjct: 3055 PRFAQKVHEASVREDVPLGYSVLTIKATDIDT--VDSFHRFLISSGDEENMFTITESESE 3112
Query: 64 NHFRIVPT--KIDPGTKKKEYNIVVL 87
I+ K+D +K YN++V+
Sbjct: 3113 KMTAIITVRGKLDR-ERKSFYNMIVV 3137
>gi|426253547|ref|XP_004020454.1| PREDICTED: cadherin-7 [Ovis aries]
Length = 785
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G N+++ Y + GDGLG F I
Sbjct: 258 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-IGANAEMDYKIVDGDGLGIFKI---- 312
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+D T +E I + K LD E A Y L + A +K PR
Sbjct: 313 ----------AVDKDT--QEGIITIQKDLDFE-AKTSYTLRIEAANKDADPR 351
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPRFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
>gi|363746929|ref|XP_427684.3| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like,
partial [Gallus gallus]
Length = 1369
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/112 (35%), Positives = 56/112 (50%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGY-FTIDNE 60
NAP+F +QATV EN P+G VI ++A DAD G N++++YS+ G G+ F I+N
Sbjct: 62 NAPIFVSTPFQATVLENVPVGYSVIHVQAIDAD-SGDNARLAYSLMEA-GAGFPFAINNS 119
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
IVV LDRE Y+ + A D+G+PP
Sbjct: 120 TGW--------------------IVVASELDREAVDF-YSFGVEAQDQGSPP 150
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 54/115 (46%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR-GGDGLGYFTIDNE 60
NAP F YQ +V E+ P T V+ + A D D G+N ++ Y+ + G DG G F I++
Sbjct: 372 NAPQFLRDSYQGSVYEDVPAFTSVLQVSATDRD-SGLNGRVFYTFQGGDDGDGDFIIEST 430
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ + L+ LDRE PL Y L AVDKG P R T
Sbjct: 431 SGI--------------------VRTLRRLDRENVPL-YALRAYAVDKGVPARRT 464
Score = 40.4 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 24/110 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF Y V E++P+GT V+ + A D D G N++I+Y + E +
Sbjct: 271 PVFQSSHYTVNVNEDRPVGTTVVVISATDED-TGENARITYLM-------------EDSI 316
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
FRI P D G + LD E + Y L + A D G P +
Sbjct: 317 PQFRIAP---DTGAVTTQME------LDYE-DQVSYTLAITARDNGIPQK 356
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N+P F+ Y A + E+ +GT V+T+ A D D NS I+Y + G+ F+I ++
Sbjct: 167 NSPEFTQREYSARLNEDAAVGTSVLTVSAVDRDA---NSVITYQISSGNTRNRFSITSQ 222
Score = 35.8 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVF + V+EN PIG +V + A D D G N++I Y + G+ F +D
Sbjct: 478 NPPVFERDEFDIFVEENSPIGLVVARITATDPD-EGPNAQIMYQIVEGNIPEVFQLD 533
>gi|386118337|gb|AFI99116.1| seven transmembrane protocadherin flamingo [Clytia hemisphaerica]
Length = 2923
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F VYQ V EN IGT++ ++ A DAD G N++I+YS++ G
Sbjct: 752 NSPRFGQDVYQWNVLENADIGTVIKSVLATDAD-TGENARITYSLQPG-----------S 799
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
P++ F IV TKKK LDRE Y L ++A D G P ++
Sbjct: 800 PIDTFGIVNDTGAITTKKK---------LDRETTK-SYTLVVKASDHGKPFKK 842
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 51/108 (47%), Gaps = 21/108 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F++ Y TV E Q ++T++A DAD G N +I YS+ +
Sbjct: 331 NAPTFAESSYSITVDEGQVANKYILTVRATDAD-EGSNQEIRYSIVNKANVQ-------- 381
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
VP +IDP + I +LDRE P YN T+RA D+G
Sbjct: 382 -------VPFQIDPISGA----IKSTDVLDRETHPY-YNFTVRAEDQG 417
>gi|432879471|ref|XP_004073487.1| PREDICTED: protocadherin gamma-A8-like, partial [Oryzias latipes]
Length = 681
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 19/115 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS +Y+ VKEN GT+V+ + A D D G+NS+++YS + N
Sbjct: 235 NVPAFSKSLYKVRVKENTAPGTIVLRVNATDLD-EGINSRLTYS--------FIKRGNID 285
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
P N F + + I V + +D E +P Y++ ++A D+G PR T+
Sbjct: 286 PSNLFEL---------NAETGEITVKRNIDYEESP-AYDIRVQAKDRGASPRSTH 330
Score = 39.3 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S VKE+ +G +V + +D D G +G+ TI
Sbjct: 343 NAPEISVTSLMTPVKEDAEVGAVVAFITVSDKDA------------GSNGVTKCTIVGSA 390
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P F++ K +Y++VV LDRE + YN+T++A D+G PP
Sbjct: 391 P---FKL------KSNYKNDYSLVVDGPLDRENISV-YNVTIKATDEGNPP 431
Score = 35.8 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD 34
NAP F++ V VKEN P+G+++ +KA D D
Sbjct: 448 NAPKFTEPVINVYVKENSPVGSIISKIKAVDPD 480
>gi|345496415|ref|XP_001602469.2| PREDICTED: protocadherin-like wing polarity protein stan-like
[Nasonia vitripennis]
Length = 3216
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 16/110 (14%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
APVF + Y +V E+ P+GT V+ + A D+D G N++I+YS+ + D +G
Sbjct: 808 APVFENAPYSISVFEDAPVGTTVLVVSATDSD-VGQNAQITYSL---------SSDEDGA 857
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I+P T I K LDRE+ GY LT+ A D G PP
Sbjct: 858 ESQ-ETSKFAINPQTGA----ITTTKPLDREMDK-GYLLTITAKDGGVPP 901
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 41/110 (37%), Positives = 51/110 (46%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQ V+E+ IGT V+ + A D D G+N ++ Y V DG G F
Sbjct: 918 NAPTFDSVQYQGAVREDVLIGTSVLKVTATDID-DGLNGRVKY-VLENDGDGSFA----- 970
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
IDP T I K LDRE + YNL AVD+G+P
Sbjct: 971 -----------IDPATGV----IRTAKALDRE-STARYNLKAVAVDRGSP 1004
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 45/121 (37%), Positives = 63/121 (52%), Gaps = 17/121 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F Y+A+V E+ PIG+ VI++KA D D G NS++ YS+ G G T+ +
Sbjct: 369 HAPTFESPEYEASVHESVPIGSSVISIKATDQD-MGKNSEVEYSIVSTTGGGTTTLTEDQ 427
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKL-LDREIAPLGYNLTLRAVDKGTPP--RETYKA 118
+ FR IDP T IV K LDRE + Y + ++A D P R+T A
Sbjct: 428 --STFR-----IDPRT-----GIVTTKTSLDREKTEV-YTVIIQASDLANPESNRQTASA 474
Query: 119 T 119
T
Sbjct: 475 T 475
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 16/112 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F ++Q V E+ IG V+ ++A DAD G N++I YS+ D G G
Sbjct: 593 NVPRFHTTLFQEAVSESVSIGYSVLKVQAYDAD-EGPNAQIKYSIGSRDLSG-------G 644
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+F P ++ T I +K LDRE Y + A D G PP+
Sbjct: 645 STENF---PVAVNCETGW----IFTVKQLDREQCS-KYQFVVVASDSGEPPK 688
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F Y+A + E+ P GT V T+ A D P +++I Y + G+ G F+I ++
Sbjct: 704 NDPYFEPKSYEAVIAEDDPPGTPVTTVTATD---PDEDARIHYEISSGNTRGRFSITSQ 759
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 24/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQ--PIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P FS+ Y ++ E+ + ++ ++A DAD G N+ + Y++ GG+ F ID+
Sbjct: 486 NYPQFSERTYIVSIPEDMDYTLNPVIAEIRAIDADA-GSNAAMRYAIIGGNTQNIFQIDS 544
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ +++++K LD E Y + +RA D G P +
Sbjct: 545 QTG--------------------DVILVKPLDYETVK-NYKIIVRAQDGGMPAK 577
>gi|167538373|ref|XP_001750851.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770672|gb|EDQ84355.1| predicted protein [Monosiga brevicollis MX1]
Length = 10056
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 20/114 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF TV E+ P G+L+ ++ +DAD G N+ ++YS+ G D L
Sbjct: 3557 NSPVFES-TRPVTVAEDAPAGSLISSILVSDADA-GRNAALTYSINGSDNL--------- 3605
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
P ++ + +++ LD E YNLT+ A D G PPR T
Sbjct: 3606 --------PFRVQASSNASGVDLLTAGALDFETQA-SYNLTIVATDAGAPPRTT 3650
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGM-NSKISYSVRGGDGLGYFTIDNEG 61
AP F Y +V EN TL + + A+D D PG + I Y++ G G FTID G
Sbjct: 7767 APAFGQPSYICSVFENATANTLCVLVNASDGDEPGTPRAAIDYTLT-GTGATDFTIDRLG 7825
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ + +L+R+ + Y L + A D+G+PPR +
Sbjct: 7826 AV-------------------TVAATGVLNRDERAV-YRLNVTATDRGSPPRSS 7859
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 52/118 (44%), Gaps = 24/118 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIG-TLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+APVF+ V E +G T V + A DAD G N+ + YS+ G+G FT+D +
Sbjct: 7873 HAPVFTS-SPSVHVSEAATVGPTPVFQVVATDADL-GSNALLHYSLLPGNGAESFTLDAQ 7930
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
+ V LDRE A Y L +RA D G+PPR T A
Sbjct: 7931 TG--------------------QLFVASPLDRE-ARDAYELVVRARDHGSPPRWTDHA 7967
Score = 36.2 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAPVF D Y ++E+ +G L ++A DAD +++SYS+
Sbjct: 8427 NAPVFDDIAYSCQLQEDADVGALCTAVRAVDADAMP-EARVSYSL 8470
Score = 36.2 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 45/110 (40%), Gaps = 25/110 (22%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NEGP 62
P F Y V EN+ IG + L A D D G N +SYS+ D L F+ID G
Sbjct: 7450 PSFEASFYDVAVPENEAIGETIEQLVAFDPD-AGANGTVSYSLL-PDNLTAFSIDATTGR 7507
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L V +D T++ + T+RA D GTPP
Sbjct: 7508 LR----VNASLDYETQQS------------------FEFTVRATDAGTPP 7535
>gi|119514221|gb|ABL75884.1| protocadherin 2G9 [Takifugu rubripes]
Length = 939
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
N PVFS VY+A+++EN P+GTL++TL A DAD G+N ++ Y
Sbjct: 231 NVPVFSQAVYKASLQENSPVGTLILTLTATDAD-EGVNGEVVY 272
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 14/106 (13%)
Query: 24 LVITLKAADADPP-----GMNSKISYSVRGGDGLGYFTIDNEGPLNHFRI-------VPT 71
++I + + +PP M+S+I V G +G + + + ++ VP
Sbjct: 326 VIIDVTDVNDNPPVIYVKSMSSQIPEDVSPGSEVGIINVQDRDSEKNRQVRCSIQGNVPF 385
Query: 72 KIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
K+ P K Y++V LDRE+ YN+T+ A D+G+PP + K
Sbjct: 386 KLVPSIKNY-YSLVTTGQLDRELVS-DYNITISATDEGSPPLSSSK 429
>gi|449271626|gb|EMC81910.1| Cadherin EGF LAG seven-pass G-type receptor 2, partial [Columba
livia]
Length = 641
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 55/112 (49%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGY-FTIDNE 60
NAP+F +QATV EN P+G VI ++A DAD G NS++ Y++ G G+ F I+N
Sbjct: 117 NAPIFVSTPFQATVLENVPVGYSVIHIQAIDAD-SGDNSRLVYTLLET-GAGFPFAINNS 174
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
IVV LDRE Y+ + A D+G+PP
Sbjct: 175 TGW--------------------IVVASELDREAVDF-YSFEVEAQDQGSPP 205
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 55/115 (47%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR-GGDGLGYFTIDNE 60
NAP F YQ +V E+ P T V+ + A D D G+N ++ Y+ + G DG G F I++
Sbjct: 427 NAPQFLRDSYQGSVYEDVPTFTSVLQVSATDRD-SGLNGRVFYTFQGGDDGDGDFIIEST 485
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I L+ LDRE PL Y+L AVDKG P + T
Sbjct: 486 SGI--------------------IRTLRRLDRENVPL-YSLRAFAVDKGVPAKRT 519
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
NAP FS+ Y A V E+ + V+ + A D D G N+ + YS+ G+ G+F ID +
Sbjct: 11 NAPQFSEKRYLAQVPEDVAPNSAVLRVTATDRD-KGSNALVHYSIVSGNTRGHFYIDAQT 69
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G L+ V+ LD E++ + L +RA D G PP
Sbjct: 70 GALD---------------------VVSPLDYEVSK-EFTLRIRAQDGGRPP 99
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N+P F+ Y A + E+ +GT V+T+ A D D NS I+Y + G+ F+I
Sbjct: 222 NSPEFTQREYGARLNEDAAVGTSVLTVSAVDRDA---NSVITYQISSGNTRNRFSI 274
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 26/111 (23%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF Y V E++P+GT V+ + A D D G N++I+Y + E +
Sbjct: 326 PVFQSSHYTVNVNEDRPVGTTVVVISATDED-TGENARITYLM-------------EDSI 371
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKL-LDREIAPLGYNLTLRAVDKGTPPR 113
FRI E V ++ LD E + Y L + A D G P +
Sbjct: 372 PQFRI----------AAETGAVTTQMELDYE-DQVSYTLAITARDNGIPQK 411
>gi|47207230|emb|CAF92015.1| unnamed protein product [Tetraodon nigroviridis]
Length = 753
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAPVF+ VY+ATV EN IGTL+ + A+DAD G+NSKI+Y++
Sbjct: 222 NAPVFTKPVYKATVPENALIGTLITKVSASDAD-KGLNSKITYTI 265
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVF YQA + EN G + T++A DAD N+++SY
Sbjct: 432 NAPVFERSSYQAYIVENNTPGLSIFTVRARDAD-WNQNARVSY 473
>gi|292622519|ref|XP_001921123.2| PREDICTED: neural-cadherin-like [Danio rerio]
Length = 2555
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP FS VY+ +V+E++ +G +VIT+ A D D G N+K+ Y + G+ +G F ++ E
Sbjct: 868 NAPAFSQPVYEISVEEDKEVGFVVITVTANDED-EGANAKLRYQITSGNTMGTFDVEPE 925
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ VY A++ EN I + V+ + A D D G NS +++S+ GGD F I+ + +
Sbjct: 1193 PVFTQRVYMASMSENLDINSEVMVVAATDGD-EGENSVMTFSIIGGDEDRKFFIETD-KV 1250
Query: 64 NHFRIV--PTKID-PGTKKKEYNIVVLKLLDREIAPLGY 99
N IV KID ++ +N+ V K+ D + L Y
Sbjct: 1251 NRRGIVRLKKKIDFEKPHERTFNLTV-KVEDADFFSLAY 1288
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 21/113 (18%)
Query: 2 NAPVF---SDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFT 56
NAPVF +D + V EN P T ++ ++A D D P G N+ ++Y +
Sbjct: 1077 NAPVFLCATDNCFLGHVPENSPADTSIMEMRATDLDDPKAGKNAILTYRIVQ-------N 1129
Query: 57 IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ NE LN F I PT GT VL+ LDRE+ Y + + A D G
Sbjct: 1130 VRNEINLNLFSINPTT---GTI-----YTVLRSLDREVVDR-YLVVVEARDGG 1173
Score = 40.0 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 2 NAPVFSD---FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG 51
N PVF + + A V ENQP GT V+ ++A DAD G+N ++ Y + DG
Sbjct: 432 NKPVFDECHNYSVNALVLENQPPGTFVLRVQAHDAD-TGVNGEVKYGIMQRDG 483
Score = 38.9 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 4 PVFSDFVY-QATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
P F +Y + V E P GT ++ + A D D G+N+++SY ++ D F I ++G
Sbjct: 225 PEFMHSIYSRDNVPETTPTGTSLLQVLARDCDT-GLNAELSYFIQSVD----FDITSQG- 278
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ P + LD E Y T+ AVDKGTPPR
Sbjct: 279 ---------VVSPSQR-----------LDYERPNHMYECTVVAVDKGTPPR 309
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
APVFS +Y+ + E+ TLV + A D D G ++Y++ GG+ F +DN+
Sbjct: 326 APVFSQTIYKTFLSEDAGPETLVAIVHAKDPDGDG----VTYAITGGNEDSNFELDNQKG 381
Query: 63 LNHFRIVP 70
+ R P
Sbjct: 382 IIKLRRSP 389
Score = 35.4 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTID 58
N P F Y+ATV E IGT V + A D D G++ I+Y + + GD +F+I+
Sbjct: 753 NVPFFMSSTYEATVPEGAEIGTSVAQVSATDLD-SGLHGMINYIILKDQSGDS-QFFSIN 810
Query: 59 NEGPLNHFR 67
+ + H R
Sbjct: 811 SYTGIIHTR 819
>gi|157108477|ref|XP_001650243.1| cadherin [Aedes aegypti]
gi|108884003|gb|EAT48228.1| AAEL000700-PA [Aedes aegypti]
Length = 3131
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 25/107 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTIDNEGPLNHFRIVP 70
+V+E QPIGT V+ ++A D D G+N+ I+YS+ R DG G FTID P+ ++
Sbjct: 898 SVREEQPIGTEVVRVRAIDRD-YGVNASITYSILKGRDSDGHGMFTID---PITG--LIR 951
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
TK LD E + Y L + A D G PPR+T +
Sbjct: 952 TKAS---------------LDHEEKTI-YRLAVAATDNGKPPRQTVR 982
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N P F Y AT+ E+ PIGT V+T+KA DAD G+N++I YS+
Sbjct: 1560 NDPKFELQKYIATIDEDAPIGTTVLTVKAVDAD-IGINARIVYSL 1603
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 26/115 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y+ ++EN G+++ + A DAD G+N+ + YS+
Sbjct: 782 NNPIFAKQLYEFQIEENMRRGSVIGLITATDAD-AGINAVVRYSLI-------------- 826
Query: 62 PLN-HFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
P N F+I P + T+ + LDRE + Y+L + A D+GTP R +
Sbjct: 827 PSNTSFQINPISGEITTRDR---------LDRETKSI-YDLVVEARDQGTPYRSS 871
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 21/113 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGM-NSKISYSVRGGDGLGYFTIDNE 60
NAP F Y+ + E PI + + A DAD NS++ Y + G+ G+F+ID
Sbjct: 2332 NAPEFQPGPYEVAISETAPIKYSIGQISAVDADLLNSPNSEVVYQIVSGNDGGWFSIDLI 2391
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
L + + LD + P +NL +RA D P+
Sbjct: 2392 TGL--------------------LYINNNLDYDRGPTQFNLVIRACDSHVLPK 2424
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 26/102 (25%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NEGPLNHFRIV 69
Y V EN + +++ T+ A+DAD G+N +I+YS+ GG+ F+ID N G L
Sbjct: 1465 YPLAVPENSEL-SVIHTVVASDADE-GLNGEITYSISGGNIGNKFSIDMNTGAL------ 1516
Query: 70 PTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ LDREI Y L + A D+G+P
Sbjct: 1517 ----------------TARPLDREIHAR-YVLQITAQDRGSP 1541
Score = 35.8 bits (81), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 46/110 (41%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y A+V E G VI + A D D G N+ I Y + G+ F I+
Sbjct: 1883 NAPRFTQQQYSASVWEGNNKGEFVIKVNAFDTD-QGSNAHILYHIVDGNHDNAFIIEPA- 1940
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
IV T I +LDREI Y L + A D+G P
Sbjct: 1941 ---FSGIVKTNI---------------VLDREIRD-KYKLKVIATDEGVP 1971
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 6 FSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
F + Y+ + EN PIG V+ L A +D G KI YS G+ G F+ID
Sbjct: 1776 FQNNSYKVNLVENTPIGQTVLHLNAVRSD--GRRQKIIYSFGSGNEDGTFSID 1826
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
NAPVF Y V E+ P + ++ + A DAD G N++++Y + G D
Sbjct: 661 NAPVFERSEYAIKVSESTPSNSQIMQVTAVDAD-TGNNARLTYRILGDD 708
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 13/108 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y V EN+PIG + T +A D D G +++YS+ GY ++D+
Sbjct: 2440 NEPQFPVPEYLEFVGENEPIGISIFTARATDMD-RGEYGRVNYSIDNAMTSGYSSVDDGW 2498
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
L K+D + N V D E Y+ TLRA D G
Sbjct: 2499 KL-------FKVDSVSGVINSNAV----FDYE-EKNRYSFTLRATDTG 2534
>gi|240975980|ref|XP_002402241.1| protocadherin-16, putative [Ixodes scapularis]
gi|215491130|gb|EEC00771.1| protocadherin-16, putative [Ixodes scapularis]
Length = 2493
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F + Y+A+++E+ P GT VI + A D D N I+Y + G+ G F + G
Sbjct: 1799 NAPRFLESAYRASIREDTPPGTTVIRVSATDLDISRDNHNINYRIMDGNAGGTFVV--SG 1856
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L +++ K LDRE + Y+L + A+D+GTP
Sbjct: 1857 SLGE------------------VILAKPLDREKVMM-YSLKVVAIDRGTP 1887
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N+P F +Y V+E+ PIGT V T +A DAD G+ K++Y++ G+G F ID +
Sbjct: 2011 NSPHFPLAMYTEFVEESSPIGTTVFTARAMDAD-RGLYGKLNYTMAEGEGRDKFRIDRD 2068
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 22/117 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F+ Y A + E+ +G+ +IT+ A D D G N++I YS+ +G++ +N G
Sbjct: 1694 NSPRFTQPSYHAILPESAGLGSSIITVNATDLD-SGNNAQIWYSLGESYSIGFYINENTG 1752
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
I K L + LT+RA D+G P R T A
Sbjct: 1753 ---------------------TIYTNKSLSYDPKKPVVQLTVRATDRGVPSRSTVAA 1788
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F Y ATV E+ P+ T V+ +KA D D G N ++YS+ G + F ID++
Sbjct: 1170 NDPQFEHSEYSATVPEDAPVNTTVLVVKATDHD-EGSNGHVTYSL-GNETASLFNIDSD 1226
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF +Y+ V + P G +V ++A D D G + KI Y +RGG +F I+ +
Sbjct: 2116 PVFRQKMYRFAVPGDAPAGHIVGRVQATDVD-QGPDGKIVYQIRGGS--AHFRINGTSGV 2172
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVL 87
++ PT+ D + E N+ V+
Sbjct: 2173 VTVKVPPTRHDEHERPFEANLEVV 2196
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 24/114 (21%)
Query: 2 NAPVFSDFVYQAT-VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAPVF + V+E QP+GT + ++A DAD G N+ + Y +R DG F I
Sbjct: 541 NAPVFVEPAETLVGVREEQPVGTELAQVQAVDAD-EGKNADVFYEIR-ADGSPAFAIHRT 598
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+V T+ ++++Y Y+L + A D G PP E
Sbjct: 599 SG-----VVTTRTVLDHEQQDY----------------YSLVVVARDGGAPPME 631
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 49/112 (43%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F V++ V E+ G V T+ A D D G N+ + YS+ +G
Sbjct: 438 NDPMFEKPVFEFFVPEDAEKGRRVGTVSAHDKDA-GSNAALRYSLVNANG---------- 486
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
F+I P + TK LLDRE + Y +T D+GTPPR
Sbjct: 487 ---SFQINPVTGEIFTKV---------LLDRE-SKSSYEVTAEVHDQGTPPR 525
>gi|33112062|gb|AAP94032.1| cadherin 7 precursor [Mus musculus]
gi|148707892|gb|EDL39839.1| cadherin 7, type 2 [Mus musculus]
gi|187954405|gb|AAI41120.1| Cadherin 7, type 2 [Mus musculus]
Length = 785
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G+N+++ Y + GDG+G F
Sbjct: 258 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-IGVNAEMEYKIVDGDGVGIF------ 310
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
KI +E I + K LD E A Y L + A ++ PR
Sbjct: 311 ----------KISADKDTQEGIITIQKELDFE-AKTSYTLRIEAANRDADPR 351
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
>gi|148703182|gb|EDL35129.1| mCG142340, isoform CRA_b [Mus musculus]
Length = 1859
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF VY+ + E P G+ V + A D D G+N+ + YS+ G+GLG+F I
Sbjct: 473 PVFEQQVYRVNLSEEVPPGSYVSGVSATDGDS-GLNANLRYSIVSGNGLGWFHIS----- 526
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T G LDRE+A L + A D+G P+ +Y
Sbjct: 527 EHSGLVTTSAAGG-------------LDRELAS-QIVLNISARDQGVHPKVSY 565
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD P N IS + GG NE HF + +K
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSPAANGNISVQILGG---------NEQ--RHFEVQRSK 413
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD-KGTPPRETYKA 118
+ P I V LDRE P YNLT+ D G PP +A
Sbjct: 414 V-PNLSL----IKVASALDRERIP-SYNLTVSVSDNSGAPPTAEVQA 454
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N+ I Y ++ +EG
Sbjct: 246 NPPVFGSSHYQAGVPEDAVVGSSVLQVAAADAD-EGTNADIRYRLQ-----------DEG 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P ++DP T I V + LD E A Y+LT++A D+G P
Sbjct: 294 -------TPFQMDPETGL----ITVREPLDFE-ARRQYSLTVQATDRGVP 331
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G+N+ + Y++ G + G F+
Sbjct: 1300 NTPSFPKSTLFVDVLENMRIGELVSSVTATDSD-SGVNADLHYTITGSNNHGTFS----- 1353
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1354 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1391
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G VI A D+D G++ + SY + G+ G F +D
Sbjct: 131 NAPVFPDPSIVVTFKEDSGSGRQVILDTATDSDIGSNGVDHR-SYRIVSGNEAGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P R Y
Sbjct: 189 -----------ITLNPSGEGAFLHLVSKGGLDREVTP-QYQLLVEVEDKGEPKRRGY 233
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y+ T+ E++P+ + ++A+D D G N +I+Y++ G+ F I +G
Sbjct: 992 NPPVFDQISYEVTLSESEPVNSRFFKVQASDKD-SGANGEIAYTITDGNNGDAFGIFPDG 1050
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG 98
L + +++D + + +VV DR + PL
Sbjct: 1051 QL----YIKSELDRELQDRYVLLVVAS--DRAVEPLS 1081
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A ++EN+P G+ V T+ A D D G N + YS+ GD
Sbjct: 685 NSPVFYPVQYFAHIQENEPGGSYVTTVSATDPD-MGPNGTVKYSISAGD 732
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 47/111 (42%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQATV E T V+ + A+D D G N I YS+ G+ F ID+
Sbjct: 1195 NAPKFLKDFYQATVSETATNLTQVLRVSASDVD-EGSNGLIHYSILKGNEERQFAIDSFS 1253
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ ++ LD E A Y+L ++AVD G P
Sbjct: 1254 G--------------------QVTLVGKLDYE-ATSAYSLLIQAVDSGAIP 1283
>gi|326673407|ref|XP_001922122.3| PREDICTED: protocadherin beta-16-like [Danio rerio]
Length = 800
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLG-YFTIDNE 60
NAPVF+ +Y+A + EN P GT +IT+ A+D+D G + ++SY + DG+ F I+N
Sbjct: 228 NAPVFTKPIYRAIITENSPSGTPLITVSASDSD-KGAHGEVSYLIANSDGVSDVFHINNN 286
Query: 61 G 61
G
Sbjct: 287 G 287
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVF YQA+V+EN G + T++A DAD N+++SY
Sbjct: 436 NAPVFEQSSYQASVQENNTPGLSIFTVRARDAD-FNQNARVSY 477
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF + + E+ +G+ + KA DAD G +GL + +
Sbjct: 119 NSPVFKRDERRFEISESAVVGSKFMLEKAIDADI------------GANGLQSYFLQ--- 163
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P +HF + G+KK E +++ K LDRE +L L AVD G PP+
Sbjct: 164 PTDHFNLKLHGQSDGSKKVE--MILQKPLDREKQE-NVSLILTAVDGGEPPK 212
>gi|449676278|ref|XP_004208594.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like
[Hydra magnipapillata]
Length = 919
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 21/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y T+KE QP+ ++T++A+D D G+NS+I YS+ +
Sbjct: 142 NHPIFSMPAYLKTIKEEQPLNQFILTVQASDND-FGINSEIKYSIIKNTSID-------- 192
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+P +ID T I +++LDREI Y L ++A DKG P
Sbjct: 193 -------IPFEIDEKTGV----IKNVQILDREIKSF-YLLYVKAEDKGVDP 231
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y + E+ IG+ V T+ A D D G+N ISYS+ G F I ++
Sbjct: 641 NAPKFVKDNYDVEILESVAIGSFVTTVSAID-DDDGINKLISYSIESS-GDDSFAIASDT 698
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I +KLLDRE+ P Y +T+ A DKG T
Sbjct: 699 GI--------------------ITTIKLLDREVIP-AYKITVVATDKGIKQLST 731
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F++ + V E+ PIGT++ + A D D G N+KISY + +
Sbjct: 537 NYPRFAESIVTLMVAEDVPIGTIIGKITATD-DDSGDNAKISYFL-------------QN 582
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P +F + D G + N LDRE L Y L + AVD G P
Sbjct: 583 PDENFLL---NKDTGELYTQLN------LDRE-KKLSYQLIIEAVDHGKP 622
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 48/112 (42%), Gaps = 20/112 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P+F+ Y+ ++ E+ IGT+V A D G N +++YS F D
Sbjct: 353 NSPIFTRRSYKTSISESSEIGTIVFNKLTAKDDDSGENGRVTYS---------FLSDTPK 403
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
L P +DP T + VL LD E+ Y + A D G P R
Sbjct: 404 DL------PFLLDPLTGA----LKVLNKLDYEVKK-SYTFFVVASDHGVPQR 444
>gi|126321873|ref|XP_001365666.1| PREDICTED: cadherin-7 [Monodelphis domestica]
Length = 785
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G N+++ Y + GDGLG F I
Sbjct: 258 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-VGPNAEMEYKIVDGDGLGVFKI---- 312
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+D T +E I + K LD E A Y L + A +K PR
Sbjct: 313 ----------SVDKDT--QEGIITIQKELDFE-AKTSYTLRIEAANKHVDPR 351
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNEGP 62
P+FS +Y V E +G ++ T+ A DP NS + YS+ R D YF ID
Sbjct: 375 PIFSSRLYPMEVSEATQVGNIIGTVTA--HDPDSSNSPVRYSIDRNTDLERYFNIDANSG 432
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I K LDRE + +N+T+ A++ P +
Sbjct: 433 V--------------------ITTAKSLDRETNAV-HNITVLAMESQNPSQ 462
>gi|440902491|gb|ELR53280.1| Cadherin-7, partial [Bos grunniens mutus]
Length = 369
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G N+++ Y + GDGLG F I
Sbjct: 215 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-IGANAEMDYKIVDGDGLGIFKI---- 269
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+D T +E I + K LD E A Y L + A +K PR
Sbjct: 270 ----------AVDKDT--QEGIITIQKDLDFE-AKTSYTLRIEAANKDADPR 308
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 106 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 162
>gi|195333203|ref|XP_002033281.1| GM21230 [Drosophila sechellia]
gi|194125251|gb|EDW47294.1| GM21230 [Drosophila sechellia]
Length = 3575
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 19/110 (17%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP+F + Y A+V E+ P+GT V+ + A D+D G+N++I+YS+ NE
Sbjct: 894 APIFENAPYSASVFEDAPVGTTVLVVSATDSD-VGVNAQITYSL------------NEES 940
Query: 63 LNHF-RIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+N P I+P T IV LDRE GY LT+ A D G P
Sbjct: 941 INGLGSPDPFSINPQTGA----IVTNAPLDRETTS-GYLLTVTAKDGGNP 985
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 42/112 (37%), Positives = 57/112 (50%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDNE 60
NAP F +YQA++ E+ +GT VI + A+D D G+N +I Y + D G F ID
Sbjct: 1003 NAPAFKSPLYQASILEDALVGTSVIQVAASDPD-VGLNGRIKYLLSDRDIEDGSFVID-- 1059
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PT GT + K LDRE + ++LT AVDKG+PP
Sbjct: 1060 ---------PTS---GTIRTN------KGLDRESVAV-FHLTAIAVDKGSPP 1092
Score = 42.7 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F +Q +V EN P+G +I ++A D+D G N++I+YS+ D DN
Sbjct: 685 NAPRFYTSQFQESVLENVPVGYNIIRVQAYDSD-EGANAEITYSISERD-------DN-- 734
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P +DP T + +K LDRE + + A D G PP+
Sbjct: 735 -------FPLAVDPRTGW----VQTIKPLDRE-EQGRFAFQVVAKDGGVPPK 774
Score = 42.0 bits (97), Expect = 0.073, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 25/115 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGT---LVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P FS+ Y V E+Q GT V ++A DAD G N+ I Y++ GG+ F+ID
Sbjct: 577 NYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQ-GNNAAIRYAIIGGNTQSQFSID 635
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ ++ ++K LD E + Y L +RA D G+P R
Sbjct: 636 SMSG--------------------DVSLVKPLDYE-SVRSYRLVIRAQDGGSPSR 669
Score = 42.0 bits (97), Expect = 0.089, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 15/119 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG-GDGLGYFTIDNE 60
++P F ++A+++E +G+ VITL+A D D G N++I Y + DG G D E
Sbjct: 460 HSPTFEAEQFEASIREGATVGSTVITLRATDQD-IGKNAEIEYGIEAVTDGAG-LAQDQE 517
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
P+ FRI + I LDRE + Y+L + A D + E AT
Sbjct: 518 MPI--FRI---------DSRSGVISTRSSLDRETSD-SYHLLVTAADLASAQSERRTAT 564
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F+ Y+A V E+QP GT V T+ A D P +S++ Y + G+ G F I ++
Sbjct: 790 NDPAFNPKYYEANVGEDQPPGTPVTTVTATD---PDEDSRLHYEITTGNTRGRFAITSQ 845
Score = 38.9 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT-IDNEGP 62
P F+ V EN P+G++V + A D D G+N+ + YS+ GGD F+ + G
Sbjct: 1111 PTFASDKITLYVPENSPVGSVVGEIHAHDPD-EGVNAVVHYSIIGGDDSNAFSLVTRPGS 1169
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVV 86
+ T++D + +K + +VV
Sbjct: 1170 ERAQLLTMTELDYESTRKRFELVV 1193
>gi|194758613|ref|XP_001961556.1| GF14875 [Drosophila ananassae]
gi|190615253|gb|EDV30777.1| GF14875 [Drosophila ananassae]
Length = 3563
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 25/107 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTIDNEGPLNHFRIVP 70
+V+E QP GT V+ ++A D D G N+ I+YS+ R DG G F+ID + + R+V
Sbjct: 1261 SVREEQPPGTEVVRIRAIDRDN-GQNASITYSIVKGRDSDGHGLFSIDPKTGMIRTRVV- 1318
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
LD E + Y L + A D G+PPRET +
Sbjct: 1319 -------------------LDHEERSI-YRLGVAATDGGSPPRETVR 1345
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P FS + ATV E GT V ++A DAD G N+++ Y + G+ F I+
Sbjct: 2324 NSPQFSQRKFVATVSEGNNKGTFVAQVQAFDAD-AGANARLRYHIVDGNHDNAFIIEPA- 2381
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
IV T I +LDREI + YNL + A D+G P
Sbjct: 2382 ---FSGIVKTNI---------------VLDREIRDI-YNLKIIATDEGVP 2412
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 48/110 (43%), Gaps = 11/110 (10%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y V E++ I T +I + A+D D G N++I+Y + T +
Sbjct: 1029 NPPVFEREEYFVNVSESRSINTQIIQVNASDLD-TGNNARITYRIVDAGVDNVTTSSSSD 1087
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
HF I P I + LLDRE Y LT+ A D GTP
Sbjct: 1088 VAQHFGIFPNS---------GWIYLRALLDRETRDR-YQLTVLATDNGTP 1127
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT 56
N P+F Y +V EN+P+G ++ + A+D D G+N+ ++Y++ G+G + T
Sbjct: 604 NEPIFDQSFYNVSVAENEPVGRCILKISASDPD-CGVNAMVNYTL--GEGFKHLT 655
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y A+V+E+ P GT V + A+DAD G+N+++ YS+ + F ID+
Sbjct: 1947 NAPRFELSKYTASVQEDAPPGTRVAQITASDAD-LGVNARLVYSL-ANESQWQFAIDSSS 2004
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
L I + LDRE+ Y+ + A D G
Sbjct: 2005 GL--------------------ITTIGKLDRELQA-SYSFMVVATDGG 2031
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NEG- 61
P+F Y VKE+ P GT+V ++ A D S + YS+ GD GYF+I+ N G
Sbjct: 822 PIFEKARYNYYVKEDIPRGTVVGSVIATSGD-TAHRSPMRYSIYSGDPDGYFSIEANSGN 880
Query: 62 -----PLNH 65
PL+H
Sbjct: 881 IRIAKPLDH 889
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 50/116 (43%), Gaps = 24/116 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P+F+ Y ATV EN +GT V+ + A+D D N + Y++ R D F
Sbjct: 279 NQPIFNQSRYFATVPENATVGTSVLQVYASDTD-ADENGLVEYAINRRQSDKEKMF---- 333
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+IDP T I + K LD E L + L + A D G P ET
Sbjct: 334 ------------RIDPRTGA----IYINKPLDFETKEL-HELVVVAKDHGEQPLET 372
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 22/105 (20%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
+ E+ G V + D D + ++ S+ GGDG HF +
Sbjct: 403 ISESAQPGEFVARISVHDPDSKTEYANVNVSLNGGDG-------------HFALT----- 444
Query: 75 PGTKKKEYNIVVLKL-LDREIAPLGYNLTLRAVDKGTPPRETYKA 118
T+ +V++ L LDRE+ Y L++ A DKGTPP K+
Sbjct: 445 --TRDNSIYLVIVNLPLDREMVS-NYTLSVVATDKGTPPLHASKS 486
>gi|156361307|ref|XP_001625459.1| predicted protein [Nematostella vectensis]
gi|156212294|gb|EDO33359.1| predicted protein [Nematostella vectensis]
Length = 814
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 24/111 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N P+F Y+ V EN P+GT+V +KA D D N+ + YS++ G+ G FTIDN
Sbjct: 105 NRPIFQPMEYETRVSENTPLGTIVARVKAVDKDSTS-NADLIYSIQNGNNNGSFTIDNST 163
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
G + +KE++ + +R YNLT+ D G P
Sbjct: 164 GEI-------------MTRKEFD---FEKTER------YNLTISVSDTGVP 192
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVFS +Y A++ EN +G +++ + A+D D +N K+ +S+ G+ G F +D N
Sbjct: 704 NSPVFSQKMYSASIDENTTVGHVILRVTASDLD-SSLNGKVLFSILEGNSDGKFVVDQNT 762
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G +V T K LD E Y L ++A D G PP
Sbjct: 763 G------VVTTN---------------KSLDYEDVT-EYTLVIQATDCGDPP 792
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 51/116 (43%), Gaps = 22/116 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y ATV EN +GT+V+ + A D D G N+ + YS+ G+ F I
Sbjct: 212 NPPEFAQKRYTATVYENFTVGTVVLRVTAHDKD-SGPNAMLKYSIHSGNTDDAFVI---- 266
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
D G +I + K LD+E Y L L D G PP E+ K
Sbjct: 267 ----------IADSG------DISLDKPLDKETIE-NYTLVLIVTDMGIPPLESIK 305
Score = 37.4 bits (85), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 23/111 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNEGP 62
P+F+ +Y A + E+ +G ++T+ A D D +N++++YS V YF IDN
Sbjct: 1 PIFNQTLYSAIIPEDFTVGGTLLTVLARDQD-AALNARVTYSIVSFSTESDYFVIDN--- 56
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
T + +K+ +Y + Y+ ++RA D+G+P R
Sbjct: 57 -------ITGVVRSSKEFDYETQRM-----------YSFSVRAEDRGSPIR 89
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 48/112 (42%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N P F Y + EN IGT V + A+D D +N K+ +S+ GG+ G F ID N
Sbjct: 597 NRPYFLPTRYYVQLVENVAIGTPVTQVTASDLD-SSLNGKVLFSILGGNSDGKFVIDQNT 655
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G +V T K LD E Y L ++A D G PP
Sbjct: 656 G------VVTTN---------------KSLDYEDVT-EYTLVIQATDCGDPP 685
>gi|386767716|ref|NP_001246258.1| starry night, isoform E [Drosophila melanogaster]
gi|383302402|gb|AFH08012.1| starry night, isoform E [Drosophila melanogaster]
Length = 3578
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 19/110 (17%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP+F + Y A+V E+ P+GT V+ + A D+D G+N++I+YS+ NE
Sbjct: 894 APIFENAPYSASVFEDAPVGTTVLVVSATDSD-VGVNAQITYSL------------NEES 940
Query: 63 LNHF-RIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+N P I+P T IV LDRE GY LT+ A D G P
Sbjct: 941 INGLGSPDPFSINPQTGA----IVTNAPLDRETTS-GYLLTVTAKDGGNP 985
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 42/112 (37%), Positives = 57/112 (50%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDNE 60
NAP F +YQA++ E+ +GT VI + A+D D G+N +I Y + D G F ID
Sbjct: 1003 NAPAFKSPLYQASILEDALVGTSVIQVAASDPD-VGLNGRIKYLLSDRDIEDGSFVID-- 1059
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PT GT + K LDRE + ++LT AVDKG+PP
Sbjct: 1060 ---------PTS---GTIRTN------KGLDRESVAV-FHLTAIAVDKGSPP 1092
Score = 42.7 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F +Q +V EN P+G +I ++A D+D G N++I+YS+ D DN
Sbjct: 685 NAPRFYTSQFQESVLENVPVGYNIIRVQAYDSD-EGANAEITYSISERD-------DN-- 734
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P +DP T + +K LDRE + + A D G PP+
Sbjct: 735 -------FPLAVDPRTGW----VQTIKPLDRE-EQGRFAFQVVAKDGGVPPK 774
Score = 42.0 bits (97), Expect = 0.074, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 25/115 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGT---LVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P FS+ Y V E+Q GT V ++A DAD G N+ I Y++ GG+ F+ID
Sbjct: 577 NYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQ-GNNAAIRYAIIGGNTQSQFSID 635
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ ++ ++K LD E + Y L +RA D G+P R
Sbjct: 636 SMSG--------------------DVSLVKPLDYE-SVRSYRLVIRAQDGGSPSR 669
Score = 42.0 bits (97), Expect = 0.090, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 15/119 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG-GDGLGYFTIDNE 60
++P F ++A+++E +G+ VITL+A D D G N++I Y + DG G D E
Sbjct: 460 HSPTFEAEQFEASIREGATVGSTVITLRATDQD-IGKNAEIEYGIEAVTDGAG-LAQDQE 517
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
P+ FRI + I LDRE + Y+L + A D + E AT
Sbjct: 518 MPI--FRI---------DSRSGVISTRSSLDRETSD-SYHLLVTAADLASAQSERRTAT 564
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F+ Y+A V E+QP GT V T+ A D P +S++ Y + G+ G F I ++
Sbjct: 790 NDPAFNPKYYEANVGEDQPPGTPVTTVTATD---PDEDSRLHYEITTGNTRGRFAITSQ 845
Score = 38.9 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT-IDNEGP 62
P F+ V EN P+G++V + A D D G+N+ + YS+ GGD F+ + G
Sbjct: 1111 PTFASDKITLYVPENSPVGSVVGEIHAHDPD-EGVNAVVHYSIIGGDDSNAFSLVTRPGS 1169
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVV 86
+ T++D + +K + +VV
Sbjct: 1170 ERAQLLTMTELDYESTRKRFELVV 1193
>gi|344291677|ref|XP_003417560.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23-like [Loxodonta
africana]
Length = 2906
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 22/110 (20%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
APVF +Y A+VKENQ G V ++A D D G+NSK+ + + G G F
Sbjct: 1256 APVFKQHLYNASVKENQNPGEFVTRVEAMDRD-SGINSKLQFEILPGASFGLF------- 1307
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+I+P T + +V LDRE + + L + D GTPP
Sbjct: 1308 ---------EINPDTGE----VVTTTTLDREXQEV-FTLRVLVRDGGTPP 1343
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 43/99 (43%), Gaps = 24/99 (24%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NEGPLNHFRIVPTKI 73
V E QP+ LV T+ A D D G N ++ YSV GDG +F ID N G + I+ +
Sbjct: 842 VLEGQPVNMLVTTVFAKDLDE-GNNGEVIYSVSSGDGSDHFKIDANSGEIRTATILSSDY 900
Query: 74 DPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P Y LT+ A D+G PP
Sbjct: 901 RP----------------------SYRLTVIASDQGVPP 917
Score = 43.1 bits (100), Expect = 0.039, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F D +++EN PIGTLV A D D +NS+I YF +
Sbjct: 1041 HTPSFQDEFVVLSIEENVPIGTLVYVFNAKDGDGSFLNSRIQ----------YFIESHHP 1090
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAP 96
+N F I P+ GT +V LLDRE+ P
Sbjct: 1091 GMNPFLIHPSS---GT------LVTASLLDRELIP 1116
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 13/102 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N P F+ Y KE+ P+GT +I + A D+D G N++I Y + G+ G+F ++ +
Sbjct: 2199 NPPKFTHLEYHTHFKESTPLGTHIIVVSANDSD-MGSNAEIMYHLISGNERGHFHLEEKT 2257
Query: 61 ------GPLNH-----FRIVPTKIDPGTKKKEYNIVVLKLLD 91
PL++ F ++ D K + +V + +LD
Sbjct: 2258 GVLYLIKPLDYEETTKFTLIVQASDEEKKHFSFAVVFVDVLD 2299
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P F VY A+V E Q VI + AAD D G+N + YS+ G+ F ID
Sbjct: 1773 NLPCFEKSVYHASVSEGQLYDAHVIQVFAADPD-SGLNGLLEYSILSGNQGDAFQID 1828
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 11/111 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y ++ E+ IG ++T D D N+ + YS+ G+ +F ++
Sbjct: 2083 HAPEFTVEYYNISLSEDALIGGTLVTFSTFDRDWTRENTHVEYSIISGNSQKHFHLETSV 2142
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ + +V+L LDRE A + L + A D G PP
Sbjct: 2143 THPEYPYIQVGY----------LVLLHSLDREAAA-SHQLVILASDHGCPP 2182
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N PVFS YQ T+ E P+G V+T+ A D D G N ISY +
Sbjct: 1981 NPPVFSQDFYQVTIPETVPLGYSVLTVSATDVD-SGKN--ISYRI 2022
Score = 36.2 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++P F YQ++V+E+ GT+V+ L A D D G N +I Y + + G F ID
Sbjct: 1464 HSPSFLKLRYQSSVREDTETGTVVLVLSAMDED-EGQNGQIEYFLM-DEASGAFAID 1518
>gi|332019420|gb|EGI59904.1| Putative fat-like cadherin-related tumor suppressor-like protein
[Acromyrmex echinatior]
Length = 3467
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 25/111 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP F+ Y +T+ E+ IGTLV + A D D G+N KI Y + DG
Sbjct: 1894 NAPKFTMSTYSSTLPEDVEIGTLVTKVHATD-DDIGINRKIRYEFIDSADG--------- 1943
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
HF I D G + + K LDRE + YN+T++A+D+GTP
Sbjct: 1944 ----HFLIAA---DSGI------VTLAKSLDRETKAM-YNVTIQALDQGTP 1980
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
+AP F + Q V E+ PIGT V+ + A D D G N+KI+YS+ G+ FTID
Sbjct: 338 HAPEFISEIIQGKVYESSPIGTAVVQVCAIDRD-RGENAKITYSITSGNVGNVFTID 393
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 50/116 (43%), Gaps = 24/116 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS+ Y+A V+E+ G V + A D D N +SY + GD F+ID
Sbjct: 2103 NAPIFSEVSYRAFVREDAKTGEKVTQIYANDLDSEE-NGNVSYYIERGDRQKQFSID--- 2158
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR-EIAPLGYNLTLRAVDKGTPPRETY 116
+K I V LDR EIA Y L + A D G P ++
Sbjct: 2159 -----------------RKTGQIAVTAPLDREEIA--SYVLEVHARDNGIPMLSSF 2195
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F D Y+ATV E+ GT+V+ L D D +N+ I + + GD F I + G
Sbjct: 1689 NAPAFVDDRYEATVNEDALPGTVVVKLITVDKD-TDVNTPIEFYITSGDSRSQFQIRSTG 1747
Query: 62 PL 63
+
Sbjct: 1748 EV 1749
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ +Y A V E +GT V + A D G+N+ I YS+ GG+ F ID +
Sbjct: 1998 NPPEFASKLYFAKVPEIYAVGTEVARVLATSKD-TGVNADIYYSIVGGNEHKKFQIDAKT 2056
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ + + + LD E A Y LT++A+D G PP
Sbjct: 2057 GV--------------------LTIAEQLDYERAR-DYFLTIQAIDGGIPP 2086
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y A V+E++P+G V+ DAD ++ R G+ F ++ +G
Sbjct: 2208 NPPLFSLPNYTAVVQEDKPLGHTVLQFVVTDADIEPNADPYTFDFRSGNEGDAFRLEQDG 2267
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L TK + K K Y L +R D G+PP
Sbjct: 2268 TLR----TATKFNNRVKDK------------------YVLHVRVFDNGSPP 2296
>gi|442623252|ref|NP_001260871.1| starry night, isoform F [Drosophila melanogaster]
gi|440214275|gb|AGB93404.1| starry night, isoform F [Drosophila melanogaster]
Length = 3648
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 19/110 (17%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP+F + Y A+V E+ P+GT V+ + A D+D G+N++I+YS+ NE
Sbjct: 894 APIFENAPYSASVFEDAPVGTTVLVVSATDSD-VGVNAQITYSL------------NEES 940
Query: 63 LNHF-RIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+N P I+P T IV LDRE GY LT+ A D G P
Sbjct: 941 INGLGSPDPFSINPQTGA----IVTNAPLDRETTS-GYLLTVTAKDGGNP 985
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 42/112 (37%), Positives = 57/112 (50%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDNE 60
NAP F +YQA++ E+ +GT VI + A+D D G+N +I Y + D G F ID
Sbjct: 1003 NAPAFKSPLYQASILEDALVGTSVIQVAASDPD-VGLNGRIKYLLSDRDIEDGSFVID-- 1059
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PT GT + K LDRE + ++LT AVDKG+PP
Sbjct: 1060 ---------PTS---GTIRTN------KGLDRESVAV-FHLTAIAVDKGSPP 1092
Score = 42.7 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F +Q +V EN P+G +I ++A D+D G N++I+YS+ D DN
Sbjct: 685 NAPRFYTSQFQESVLENVPVGYNIIRVQAYDSD-EGANAEITYSISERD-------DN-- 734
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P +DP T + +K LDRE + + A D G PP+
Sbjct: 735 -------FPLAVDPRTGW----VQTIKPLDRE-EQGRFAFQVVAKDGGVPPK 774
Score = 42.0 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 25/115 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGT---LVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P FS+ Y V E+Q GT V ++A DAD G N+ I Y++ GG+ F+ID
Sbjct: 577 NYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQ-GNNAAIRYAIIGGNTQSQFSID 635
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ ++ ++K LD E + Y L +RA D G+P R
Sbjct: 636 SMSG--------------------DVSLVKPLDYE-SVRSYRLVIRAQDGGSPSR 669
Score = 41.6 bits (96), Expect = 0.094, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 15/119 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG-GDGLGYFTIDNE 60
++P F ++A+++E +G+ VITL+A D D G N++I Y + DG G D E
Sbjct: 460 HSPTFEAEQFEASIREGATVGSTVITLRATDQD-IGKNAEIEYGIEAVTDGAG-LAQDQE 517
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
P+ FRI + I LDRE + Y+L + A D + E AT
Sbjct: 518 MPI--FRI---------DSRSGVISTRSSLDRETSD-SYHLLVTAADLASAQSERRTAT 564
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F+ Y+A V E+QP GT V T+ A D P +S++ Y + G+ G F I ++
Sbjct: 790 NDPAFNPKYYEANVGEDQPPGTPVTTVTATD---PDEDSRLHYEITTGNTRGRFAITSQ 845
Score = 38.9 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT-IDNEGP 62
P F+ V EN P+G++V + A D D G+N+ + YS+ GGD F+ + G
Sbjct: 1111 PTFASDKITLYVPENSPVGSVVGEIHAHDPD-EGVNAVVHYSIIGGDDSNAFSLVTRPGS 1169
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVV 86
+ T++D + +K + +VV
Sbjct: 1170 ERAQLLTMTELDYESTRKRFELVV 1193
>gi|432961282|ref|XP_004086589.1| PREDICTED: protocadherin Fat 4-like [Oryzias latipes]
Length = 4971
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS +Y V+EN GT VI + A+DAD G N +I +S+ G+ F ID+
Sbjct: 2129 NTPSFSQNIYDIEVEENILTGTDVIQVFASDAD-DGSNGQIRFSISSGNTNSDFRIDSVT 2187
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I V K LDRE Y+L ++A D+G+ PR
Sbjct: 2188 GV--------------------ISVAKRLDRETRS-AYSLVVQAADRGSSPR 2218
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 49/109 (44%), Gaps = 21/109 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF+ +Y V E G LV +KA D+D S+ SY ID E
Sbjct: 3379 PVFTQDLYDVQVSEGLSPGDLVTFVKADDSDSVPSWSRFSY-----------FIDPELTK 3427
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F I P K + V LDRE P+ YNLT+ AVD GTPP
Sbjct: 3428 NMFTINP---------KTGQVSVAAELDRETTPV-YNLTVLAVDTGTPP 3466
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 45/99 (45%), Gaps = 17/99 (17%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN IGT+V L +D+D P N IS S+ GG+ +F + H VP
Sbjct: 349 ASVDENAQIGTVVALLTVSDSDSPSANGNISVSILGGNEQRHFEV-------HKSTVPNL 401
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I V LLDRE YNLT+ D G P
Sbjct: 402 ---------SLIKVASLLDRERIS-SYNLTVSVSDNGRP 430
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+F + +Y+ + E+ P G+ + + A D D G N+ + YS+ G+ LG+F+I + L
Sbjct: 451 PIFQEELYRVDISEDIPKGSYIKGVSATDGDS-GQNANLRYSLVSGNSLGWFSISDNSGL 509
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ LLDRE+A L + A D+G P+ +Y
Sbjct: 510 --------------------VTSAALLDREVAS-EIVLNISAKDQGLQPKISY 541
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 47/115 (40%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y A+VKEN+P G+ V T+ A+D D G N + Y + GD + N G
Sbjct: 662 NRPVFYPVQYFASVKENEPPGSYVTTVLASDRD-LGRNGTVKYVISSGDTTKFHIHSNTG 720
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
I L LDRE Y L +RA D G T+
Sbjct: 721 ---------------------KITTLVALDRE-EKTAYQLQVRATDGGGLSSHTH 753
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 54/120 (45%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y +V E+ P G+ ++T++A+D D G N+++ Y + GD G+F I EG
Sbjct: 1919 NPPVFSSSAYSTSVSESLPPGSSIVTVEASDGD-DGANAQLLYKIASGDPQGHFVITKEG 1977
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L K LDRE YNL + D PP + +T +
Sbjct: 1978 VLQ---------------------TQKALDRESQSF-YNLVITVNDLAPPPAARFTSTAQ 2015
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P+F Y+ + E++P+ + ++A D D G+N +I Y + GG+ F I +G
Sbjct: 968 NSPMFDQLSYEVIILESEPVNSRFFKVEATDKD-SGLNGEIMYDIAGGNTGDMFGIFPDG 1026
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + ++D + + YN+VV+ DR + PL ++ + +
Sbjct: 1027 QL----YIKAELDREVQDR-YNLVVVA-KDRAVEPLSASVNVTVI 1065
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 25/110 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ++V E+ +G+ ++ + A+D D G N++I Y I +EG
Sbjct: 231 NPPVFEQDQYHSSVFEDAAVGSSILQITASDQD-EGANAEIRY------------ILDEG 277
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P +IDP T IV+ + LD E + Y+LT+ A DKG P
Sbjct: 278 -------TPFQIDPKTG----TIVIKESLDFE-SKKEYSLTIHAADKGVP 315
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F V EN IG LV+++ A DAD G N+ I+YS+ + G F+
Sbjct: 1287 NSPSFPKSSLSVDVLENMRIGDLVVSVTATDAD-SGQNADITYSITAINNHGTFS----- 1340
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I ++K LD E Y L + A D G P R +
Sbjct: 1341 -----------ISPNTG----SIFLVKKLDYETQSF-YKLNITAKDNGRPARSS 1378
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 14/113 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y + EN GT++ T+ A D +NS ISY + GD G F ++ G
Sbjct: 766 NPPVFSQENYSFVMFENVSPGTVIGTVSATTVD---LNSNISYLITSGDQRGLFAVNGAG 822
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR--EIAPLGY-NLTLRAVDKGTP 111
+ ++ ++E LK++ R EI + N+T+R ++ P
Sbjct: 823 QITASSLI--------DREEKGFYQLKVVARAGEITGEAFVNITVRDLNDNAP 867
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 24/110 (21%)
Query: 3 APVFSDFVYQATVKEN-QPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+P+F Y V+EN + + ++ + A D D G NS++SY + GGD G FT+ + G
Sbjct: 2235 SPLFELSPYTINVQENLENLPKDILQVVARD-DDQGANSQLSYMLSGGDEEGAFTLSSAG 2293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L+ V K LDRE Y L + A D G+P
Sbjct: 2294 QLS---------------------VTKTLDREFGA-EYTLLITATDSGSP 2321
Score = 40.0 bits (92), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 50/106 (47%), Gaps = 25/106 (23%)
Query: 9 FVYQAT--VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHF 66
F Q T ++EN P+ T+V T +A DAD G NS + YS+RG N F
Sbjct: 2030 FTSQKTTYIQENTPVDTVVFTAQATDADS-GPNSYVEYSLRGQHQ------------NKF 2076
Query: 67 RIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I GT + + ++ LDRE Y +T+ A DKG PP
Sbjct: 2077 II-------GTVDGD--VRLIGELDREELS-NYTVTVVATDKGVPP 2112
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 61/118 (51%), Gaps = 8/118 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF++ V T++EN G ++ L A DAD G N+ ++Y++ G F ID E
Sbjct: 1715 NPPVFANDVLDVTIEENIIDGFKIMQLTAKDAD-EGPNALVTYTIISG-ADDSFRIDPES 1772
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP--PRETYK 117
++ TK ++ +Y+++V ++ + + N+T++ V+ TP R TY
Sbjct: 1773 G----DLIATKKLDRERRSKYSLLVRADDGKQSSDMRLNITVKDVNDHTPKFSRPTYS 1826
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 21/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y V ++ +GT ++ + A D G+NS+I Y + GG+ F +D
Sbjct: 2956 NPPVFESLSYFTPVTKSVKVGTRLMRVVAHDEKDFGLNSEIEYLITGGNSSSKFVLD--- 3012
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K I V L E+ + + + + A DKG PP
Sbjct: 3013 -----------------KTSGWITVFSSLVSEVNKI-FLMNVTAKDKGNPP 3045
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 28/118 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS + T+ E+ P GT V+ + ++DAD G+N + Y
Sbjct: 2339 NVPVFSSSTFHTTIAEDAPTGTDVLLVNSSDAD-VGINGAVRY----------------- 2380
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+P +++ I+ LLDRE Y L + A D G P + AT
Sbjct: 2381 -------IPVTFLINCSRRQ--IISSALLDRE-ERANYQLLVVATDGGQPKGLSSSAT 2428
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 19/109 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ Y ++ E+ P GT ++ L A+D+D G +G F+ D E P
Sbjct: 556 PTFTQSTYHVSLLEHAPAGTELLVLSASDSD------------LGPNGTIRFSFDAETPA 603
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ + ++D + + + LDRE Y L +RA D G+PP
Sbjct: 604 SLRELF--RLDAVSGRLSTAVE----LDRE-DQASYLLHIRAADAGSPP 645
Score = 36.2 bits (82), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P F+ +YQA++ E+ P T ++ + A+D D N + Y + G+ FTID+
Sbjct: 1182 NPPKFTKDIYQASISESAPNMTQLLRVSASDVD-ESKNGVVHYHIAEGNEEAQFTIDS 1238
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 49/117 (41%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMN--SKISYSVRGGDGLGYFTIDN 59
N+PVF D + KE+ G VI A DAD G N +Y + G+ F +D
Sbjct: 116 NSPVFPDASIVVSFKEDASRGRQVILDTATDAD-IGSNGVDHTTYRIVEGNEQRKFRLD- 173
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P + Y
Sbjct: 174 -----------ITVNPSGEGAFLHLVSTGGLDRELTPF-YQLLIEVEDKGVPKKFGY 218
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF + A + EN P V+ + A D D G N ++ Y++ G+ F+I
Sbjct: 2642 NLPVFDKDPFNAEILENLP-PQQVLLVSAVDLDK-GSNGQLEYAIIDGNKDNIFSI---- 2695
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I + LDRE L Y+L ++A D+G+PP+ T
Sbjct: 2696 ----------------HRATGEIRTNRPLDREKVAL-YSLKVKATDRGSPPKST 2732
Score = 35.0 bits (79), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+ P FS ATV E+ +GT + T+ A D D MN I+Y++ G+ G F ++++
Sbjct: 3062 HTPEFSQSQISATVPESLAVGTAIRTVSAKDKDKE-MNGLITYNITSGNDNGVFMLNSK 3119
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P+F Y TV+EN P GT V+ + A D D G N+ ++Y ++ D F ID
Sbjct: 3167 NPPIFDPDEYFPTVQENVPSGTTVVRMNATDRD-SGPNAVMAYVIQSSDS-DLFVID 3221
>gi|221330158|ref|NP_724962.3| starry night, isoform A [Drosophila melanogaster]
gi|320543771|ref|NP_001188903.1| starry night, isoform C [Drosophila melanogaster]
gi|226694203|sp|Q9V5N8.4|STAN_DROME RecName: Full=Protocadherin-like wing polarity protein stan;
AltName: Full=Protein flamingo; AltName: Full=Protein
starry night; Flags: Precursor
gi|220902172|gb|AAF58763.5| starry night, isoform A [Drosophila melanogaster]
gi|318068565|gb|ADV37150.1| starry night, isoform C [Drosophila melanogaster]
Length = 3579
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 19/110 (17%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP+F + Y A+V E+ P+GT V+ + A D+D G+N++I+YS+ NE
Sbjct: 894 APIFENAPYSASVFEDAPVGTTVLVVSATDSD-VGVNAQITYSL------------NEES 940
Query: 63 LNHF-RIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+N P I+P T IV LDRE GY LT+ A D G P
Sbjct: 941 INGLGSPDPFSINPQTGA----IVTNAPLDRETTS-GYLLTVTAKDGGNP 985
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 42/112 (37%), Positives = 57/112 (50%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDNE 60
NAP F +YQA++ E+ +GT VI + A+D D G+N +I Y + D G F ID
Sbjct: 1003 NAPAFKSPLYQASILEDALVGTSVIQVAASDPD-VGLNGRIKYLLSDRDIEDGSFVID-- 1059
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PT GT + K LDRE + ++LT AVDKG+PP
Sbjct: 1060 ---------PTS---GTIRTN------KGLDRESVAV-FHLTAIAVDKGSPP 1092
Score = 42.7 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F +Q +V EN P+G +I ++A D+D G N++I+YS+ D DN
Sbjct: 685 NAPRFYTSQFQESVLENVPVGYNIIRVQAYDSD-EGANAEITYSISERD-------DN-- 734
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P +DP T + +K LDRE + + A D G PP+
Sbjct: 735 -------FPLAVDPRTGW----VQTIKPLDRE-EQGRFAFQVVAKDGGVPPK 774
Score = 42.0 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 25/115 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGT---LVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P FS+ Y V E+Q GT V ++A DAD G N+ I Y++ GG+ F+ID
Sbjct: 577 NYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQ-GNNAAIRYAIIGGNTQSQFSID 635
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ ++ ++K LD E + Y L +RA D G+P R
Sbjct: 636 SMSG--------------------DVSLVKPLDYE-SVRSYRLVIRAQDGGSPSR 669
Score = 41.6 bits (96), Expect = 0.094, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 15/119 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG-GDGLGYFTIDNE 60
++P F ++A+++E +G+ VITL+A D D G N++I Y + DG G D E
Sbjct: 460 HSPTFEAEQFEASIREGATVGSTVITLRATDQD-IGKNAEIEYGIEAVTDGAG-LAQDQE 517
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
P+ FRI + I LDRE + Y+L + A D + E AT
Sbjct: 518 MPI--FRI---------DSRSGVISTRSSLDRETSD-SYHLLVTAADLASAQSERRTAT 564
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F+ Y+A V E+QP GT V T+ A D P +S++ Y + G+ G F I ++
Sbjct: 790 NDPAFNPKYYEANVGEDQPPGTPVTTVTATD---PDEDSRLHYEITTGNTRGRFAITSQ 845
Score = 38.9 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT-IDNEGP 62
P F+ V EN P+G++V + A D D G+N+ + YS+ GGD F+ + G
Sbjct: 1111 PTFASDKITLYVPENSPVGSVVGEIHAHDPD-EGVNAVVHYSIIGGDDSNAFSLVTRPGS 1169
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVV 86
+ T++D + +K + +VV
Sbjct: 1170 ERAQLLTMTELDYESTRKRFELVV 1193
>gi|195483670|ref|XP_002090383.1| GE12832 [Drosophila yakuba]
gi|194176484|gb|EDW90095.1| GE12832 [Drosophila yakuba]
Length = 3570
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 19/110 (17%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP+F + Y A+V E+ P+GT V+ + A D+D G+N++I+YS+ NE
Sbjct: 894 APIFENAPYSASVFEDAPVGTTVLVVSATDSD-VGVNAQITYSL------------NEES 940
Query: 63 LNHF-RIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+N P I+P T IV LDRE GY LT+ A D G P
Sbjct: 941 INGLGSPDPFSINPQTGA----IVTNAPLDRETTS-GYLLTVTAKDGGNP 985
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 42/112 (37%), Positives = 57/112 (50%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL-GYFTIDNE 60
NAP F +YQA++ E+ +GT VI + A+D D G+N +I Y + D G F ID
Sbjct: 1003 NAPSFKSPLYQASILEDALVGTSVIQVAASDPD-VGLNGRIKYLLSDRDMEDGSFVID-- 1059
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PT GT + K LDRE + ++LT AVDKG+PP
Sbjct: 1060 ---------PTS---GTIRTN------KGLDRESVAV-FHLTAIAVDKGSPP 1092
Score = 42.7 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F +Q +V EN P+G +I ++A D+D G N++I+YS+ D DN
Sbjct: 685 NAPRFYTSQFQESVLENVPVGYNIIRVQAYDSD-EGANAEITYSISERD-------DN-- 734
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P +DP T + +K LDRE + + A D G PP+
Sbjct: 735 -------FPLAVDPRTGW----VQTIKPLDRE-EQGRFAFQVVAKDGGVPPK 774
Score = 42.0 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 25/115 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGT---LVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P FS+ Y V E+Q GT V ++A DAD G N+ I Y++ GG+ F+ID
Sbjct: 577 NYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQ-GNNAAIRYAIIGGNTQSQFSID 635
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ ++ ++K LD E + Y L +RA D G+P R
Sbjct: 636 SMSG--------------------DVSLVKPLDYE-SVRSYRLVIRAQDGGSPSR 669
Score = 41.6 bits (96), Expect = 0.092, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 15/119 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG-GDGLGYFTIDNE 60
++P F ++A+++E +G+ VITL+A D D G N++I Y + DG G D E
Sbjct: 460 HSPTFEAEQFEASIREGATVGSTVITLRATDQD-IGKNAEIEYGIEAVTDGAG-LAQDQE 517
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
P+ FRI + I LDRE + Y+L + A D + E AT
Sbjct: 518 MPI--FRI---------DSRSGVISTRSSLDRETSD-SYHLLVTAADLASAQSERRTAT 564
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F+ Y+A V E+QP GT V T+ A D P +S++ Y + G+ G F I ++
Sbjct: 790 NDPAFNPKYYEANVGEDQPPGTPVTTVTATD---PDEDSRLHYEITTGNTRGRFAITSQ 845
Score = 38.9 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT-IDNEGP 62
P F+ V EN P+G++V + A D D G+N+ + YS+ GGD F+ + G
Sbjct: 1111 PTFASDKITLYVPENSPVGSVVGEIHAHDPD-EGVNAVVHYSIIGGDDSNAFSLVTRPGS 1169
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVV 86
+ T++D + +K + +VV
Sbjct: 1170 ERAQLLTMTELDYESTRKRFELVV 1193
>gi|281363131|ref|NP_001163113.1| starry night, isoform B [Drosophila melanogaster]
gi|386767714|ref|NP_001246257.1| starry night, isoform D [Drosophila melanogaster]
gi|272432431|gb|ACZ94388.1| starry night, isoform B [Drosophila melanogaster]
gi|383302401|gb|AFH08011.1| starry night, isoform D [Drosophila melanogaster]
Length = 3574
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 19/110 (17%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP+F + Y A+V E+ P+GT V+ + A D+D G+N++I+YS+ NE
Sbjct: 894 APIFENAPYSASVFEDAPVGTTVLVVSATDSD-VGVNAQITYSL------------NEES 940
Query: 63 LNHF-RIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+N P I+P T IV LDRE GY LT+ A D G P
Sbjct: 941 INGLGSPDPFSINPQTGA----IVTNAPLDRETTS-GYLLTVTAKDGGNP 985
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 42/112 (37%), Positives = 57/112 (50%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDNE 60
NAP F +YQA++ E+ +GT VI + A+D D G+N +I Y + D G F ID
Sbjct: 1003 NAPAFKSPLYQASILEDALVGTSVIQVAASDPD-VGLNGRIKYLLSDRDIEDGSFVID-- 1059
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PT GT + K LDRE + ++LT AVDKG+PP
Sbjct: 1060 ---------PTS---GTIRTN------KGLDRESVAV-FHLTAIAVDKGSPP 1092
Score = 42.7 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F +Q +V EN P+G +I ++A D+D G N++I+YS+ D DN
Sbjct: 685 NAPRFYTSQFQESVLENVPVGYNIIRVQAYDSD-EGANAEITYSISERD-------DN-- 734
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P +DP T + +K LDRE + + A D G PP+
Sbjct: 735 -------FPLAVDPRTGW----VQTIKPLDRE-EQGRFAFQVVAKDGGVPPK 774
Score = 42.0 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 25/115 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGT---LVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P FS+ Y V E+Q GT V ++A DAD G N+ I Y++ GG+ F+ID
Sbjct: 577 NYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQ-GNNAAIRYAIIGGNTQSQFSID 635
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ ++ ++K LD E + Y L +RA D G+P R
Sbjct: 636 SMSG--------------------DVSLVKPLDYE-SVRSYRLVIRAQDGGSPSR 669
Score = 42.0 bits (97), Expect = 0.091, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 15/119 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG-GDGLGYFTIDNE 60
++P F ++A+++E +G+ VITL+A D D G N++I Y + DG G D E
Sbjct: 460 HSPTFEAEQFEASIREGATVGSTVITLRATDQD-IGKNAEIEYGIEAVTDGAG-LAQDQE 517
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
P+ FRI + I LDRE + Y+L + A D + E AT
Sbjct: 518 MPI--FRI---------DSRSGVISTRSSLDRETSD-SYHLLVTAADLASAQSERRTAT 564
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F+ Y+A V E+QP GT V T+ A D P +S++ Y + G+ G F I ++
Sbjct: 790 NDPAFNPKYYEANVGEDQPPGTPVTTVTATD---PDEDSRLHYEITTGNTRGRFAITSQ 845
Score = 38.9 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT-IDNEGP 62
P F+ V EN P+G++V + A D D G+N+ + YS+ GGD F+ + G
Sbjct: 1111 PTFASDKITLYVPENSPVGSVVGEIHAHDPD-EGVNAVVHYSIIGGDDSNAFSLVTRPGS 1169
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVV 86
+ T++D + +K + +VV
Sbjct: 1170 ERAQLLTMTELDYESTRKRFELVV 1193
>gi|195582246|ref|XP_002080939.1| GD10750 [Drosophila simulans]
gi|194192948|gb|EDX06524.1| GD10750 [Drosophila simulans]
Length = 3463
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 19/110 (17%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP+F + Y A+V E+ P+GT V+ + A D+D G+N++I+YS+ NE
Sbjct: 894 APIFENAPYSASVFEDAPVGTTVLVVSATDSD-VGVNAQITYSL------------NEES 940
Query: 63 LNHF-RIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+N P I+P T IV LDRE GY LT+ A D G P
Sbjct: 941 INGLGSPDPFSINPQTGA----IVTNAPLDRETTS-GYLLTVTAKDGGNP 985
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 42/112 (37%), Positives = 57/112 (50%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDNE 60
NAP F +YQA++ E+ +GT VI + A+D D G+N +I Y + D G F ID
Sbjct: 1003 NAPAFKSPLYQASILEDALVGTSVIQVAASDPD-VGLNGRIKYLLSDRDIEDGSFVID-- 1059
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PT GT + K LDRE + ++LT AVDKG+PP
Sbjct: 1060 ---------PTS---GTIRTN------KGLDRESVAV-FHLTAIAVDKGSPP 1092
Score = 42.7 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F +Q +V EN P+G +I ++A D+D G N++I+YS+ D DN
Sbjct: 685 NAPRFYTSQFQESVLENVPVGYNIIRVQAYDSD-EGANAEITYSISERD-------DN-- 734
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P +DP T + +K LDRE + + A D G PP+
Sbjct: 735 -------FPLAVDPRTGW----VQTIKPLDRE-EQGRFAFQVVAKDGGVPPK 774
Score = 42.0 bits (97), Expect = 0.076, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 25/115 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGT---LVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P FS+ Y V E+Q GT V ++A DAD G N+ I Y++ GG+ F+ID
Sbjct: 577 NYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQ-GNNAAIRYAIIGGNTQSQFSID 635
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ ++ ++K LD E + Y L +RA D G+P R
Sbjct: 636 SMSG--------------------DVSLVKPLDYE-SVRSYRLVIRAQDGGSPSR 669
Score = 41.6 bits (96), Expect = 0.094, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 15/119 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG-GDGLGYFTIDNE 60
++P F ++A+++E +G+ VITL+A D D G N++I Y + DG G D E
Sbjct: 460 HSPTFEAEQFEASIREGATVGSTVITLRATDQD-IGKNAEIEYGIEAVTDGAG-LAQDQE 517
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
P+ FRI + I LDRE + Y+L + A D + E AT
Sbjct: 518 MPI--FRI---------DSRSGVISTRSSLDRETSD-SYHLLVTAADLASAQSERRTAT 564
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F+ Y+A V E+QP GT V T+ A D P +S++ Y + G+ G F I ++
Sbjct: 790 NDPAFNPKYYEANVGEDQPPGTPVTTVTATD---PDEDSRLHYEITTGNTRGRFAITSQ 845
Score = 38.9 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT-IDNEGP 62
P F+ V EN P+G++V + A D D G+N+ + YS+ GGD F+ + G
Sbjct: 1111 PTFASDKITLYVPENSPVGSVVGEIHAHDPD-EGVNAVVHYSIIGGDDSNAFSLVTRPGS 1169
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVV 86
+ T++D + +K + +VV
Sbjct: 1170 ERAQLLTMTELDYESTRKRFELVV 1193
>gi|31210749|ref|XP_314341.1| AGAP004850-PA [Anopheles gambiae str. PEST]
gi|30176549|gb|EAA09721.2| AGAP004850-PA [Anopheles gambiae str. PEST]
Length = 3543
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 43/110 (39%), Positives = 57/110 (51%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF +YQAT+ E+ IGT V+ + A D D G+N ++ Y+ LG +D EG
Sbjct: 1023 NAPVFKVPLYQATIPEDALIGTSVVQIAATDLD-MGLNGRVKYA------LGQKDMD-EG 1074
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+DP + N K LDRE P+ Y+LT A DKGTP
Sbjct: 1075 SF--------VVDPISGVIRTN----KGLDRESIPV-YHLTAIASDKGTP 1111
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 41/111 (36%), Positives = 58/111 (52%), Gaps = 21/111 (18%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDNE 60
APVF + Y A+V E+ PIGT V+ + A+D+D G+N++I+Y + +GLG NE
Sbjct: 914 APVFENAPYSASVFEDAPIGTTVLVVSASDSD-VGINAQITYLLNDESVNGLG----ANE 968
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P I+ T I+ LDRE + GY LT+ A D G P
Sbjct: 969 ---------PFTINAQTGA----IITNAKLDRE-STSGYLLTVTAKDGGNP 1005
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F +Q V E+ P+G ++ ++A D+D G NS+I+YS++ D +G
Sbjct: 705 NAPRFYTSQFQEAVLESVPVGYNIVRVQAYDSD-EGANSEITYSIQNRD---------DG 754
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+P +DP T I K LDRE Y+ + AVD G PP+
Sbjct: 755 -------MPLAVDPRTGW----IHTTKALDRE-EQSRYSFQVVAVDGGIPPK 794
Score = 42.4 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P FS Y+A + E+QP GT V T+ A D P +S++ Y + G+ G F I ++
Sbjct: 810 NDPTFSPKYYEAMLAEDQPPGTPVTTVTATD---PDEDSRLHYEITAGNTRGRFAITSQ 865
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 36/133 (27%), Positives = 54/133 (40%), Gaps = 26/133 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--------------- 46
+ P F + ATV+E +G+ VIT++A D D G N+ I Y++
Sbjct: 464 HTPTFEAEQFHATVREGVSVGSTVITIRATDQD-IGKNADIEYAITSILGENQEQSGTAA 522
Query: 47 RGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
G + D+ G FRI + I LDRE++ + Y + + A
Sbjct: 523 NGSNEGNPVEGDSNGSSQKFRI---------DARSCTISTRSALDREVSGM-YTIMVTAT 572
Query: 107 DKGTPPRETYKAT 119
D TP E AT
Sbjct: 573 DMATPQSERKSAT 585
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 24/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIG--TLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P FS+ Y V+E+Q ++ ++A+DAD G N+ I Y++ GG+ F+ID+
Sbjct: 598 NYPQFSERTYTVQVREDQWANENNVIAHIQASDADQ-GNNAAIRYAIIGGNTQSQFSIDS 656
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
++ ++K LD E Y L +RA D G+P R
Sbjct: 657 MSG--------------------DVSLVKPLDYENVR-SYRLVIRAQDGGSPSR 689
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT-IDNEGP 62
P F+ V EN P+G++V + A D D G+N+ + YS+ GGD F+ + G
Sbjct: 1131 PTFASDKLTLYVPENSPVGSVVGEIYAHDPD-EGVNAIVHYSIIGGDDSNSFSLVTRPGS 1189
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVV 86
+ T++D + +K + +++
Sbjct: 1190 DRAQLLTMTELDYESPRKRFELII 1213
>gi|390341791|ref|XP_785997.3| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3-like
[Strongylocentrotus purpuratus]
Length = 1431
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 41/115 (35%), Positives = 52/115 (45%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDNE 60
NAPVF + A ++EN P + VIT+ A+DAD G NS + Y+ GD G G FTID
Sbjct: 928 NAPVFEQTSFTAEIQENSPAYSSVITMSASDAD-QGSNSDVKYTFVDGDSGGGRFTIDET 986
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I V +LDRE Y L A D+G P T
Sbjct: 987 SGV--------------------IRVASMLDREYQA-EYILVAYAYDQGVPSLRT 1020
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 21/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF Y T E Q GTL++ ++A+D D G+N++I YS+ ++NE
Sbjct: 400 HTPVFEQPSYVETTNEGQNPGTLIVRVRASDND-DGLNAEIRYSI----------VNNES 448
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P + F + PT + I L LDRE YN+ + A D GT P
Sbjct: 449 PNDVFTMNPTSGE---------IKTLVRLDREQTER-YNILVMAQDMGTDP 489
Score = 42.0 bits (97), Expect = 0.071, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 25/116 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIG---TLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+P FS Y+ +V+E+ G + ++ + A DAD G N+ + +S+ G+ F ID
Sbjct: 508 NSPHFSQLTYEVSVREDVSPGDPESQILHVMATDADE-GSNADVHFSLTHGNFENRFRID 566
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+ +N F + +D T + Y L++RA D G PPRE
Sbjct: 567 S---VNGFISLQNSLDFETTRS------------------YRLSIRAQDSGNPPRE 601
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 19/110 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P FS +Y + EN+ G +V T+ A D D G N ++SYS+ + +
Sbjct: 294 PTFSQPIYSRQIPENENEGFVVATITATDND-DGDNGRLSYSL--------VALGDARSQ 344
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
N F + ++ I LDRE P ++ L A D GTPP+
Sbjct: 345 NMFAV---------EENTGIITTTTALDREQIP-SHSFRLTATDHGTPPK 384
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N PVF + Y T+ EN+ G V+ L A+D D G N+ + Y++ GD
Sbjct: 1034 NPPVFGERDYYVTINENRDPGEQVMKLVASDPD-SGFNAHVQYTIVRGD 1081
Score = 36.2 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP+FS+ VY A V EN G VIT+ A D P + ISY +
Sbjct: 721 NAPIFSEEVYHAAVAENAYHGFEVITVTATD---PDEQNTISYRI 762
>gi|340715254|ref|XP_003396132.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog [Bombus
terrestris]
Length = 3597
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 56/112 (50%), Gaps = 27/112 (24%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP F+ Y AT+ E+ +GTLV + A D D G+N KI Y + DG
Sbjct: 2026 NAPKFTMQTYSATLPEDVEVGTLVTKVHATDND-IGINRKIRYEFIDSADG--------- 2075
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVL-KLLDREIAPLGYNLTLRAVDKGTP 111
HF I D G IV L K LDRE + YN+T++AVD+GTP
Sbjct: 2076 ----HFLIAA---DSG-------IVTLGKPLDRETKAM-YNVTIQAVDQGTP 2112
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 24/116 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS+ Y+A+++E+ IG V + A D D N +SY + GD F+ID
Sbjct: 2235 NAPIFSEVSYRASIREDAKIGEKVTQVFANDLDSE-ENGNVSYYIERGDRQKQFSID--- 2290
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVDKGTPPRETY 116
+K I V LDRE +G Y L + A D G P ++
Sbjct: 2291 -----------------EKTGQITVAAPLDRE--EIGNYVLEVHARDSGIPRLSSF 2327
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y A V+E++P+G V+ DAD + ++ R G+ F ++ +G
Sbjct: 2340 NPPLFSLSNYTAVVQEDKPLGHTVLQFVVTDADIEPNAAPYTFDFRSGNEGDAFRLEQDG 2399
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L TK + K K Y L +R D G+PP
Sbjct: 2400 TLR----TATKFNNRVKDK------------------YELHIRVFDNGSPP 2428
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
+AP F + Q V E PIG V+ + A D D G N+KI+YS+ G+ F ID
Sbjct: 469 HAPEFISEIIQGKVYETSPIGAAVVQVYAIDRD-RGDNAKITYSITSGNVGNMFAID 524
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ VY + V E +GT V + A D G+N+ + YS+ GG+ F ID
Sbjct: 2130 NPPEFASKVYFSKVPEIYAVGTEVARVLATSKD-TGVNADVYYSIVGGNEHKKFQIDARS 2188
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I + + LD E A Y LT++A+D G PP
Sbjct: 2189 GV--------------------ITIAEQLDFERAR-DYFLTIQAIDGGIPP 2218
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F D Y+A V E+ GT+V+ L D D +N+ I + + GD F I + G
Sbjct: 1821 NPPAFVDDRYEAAVNEDALPGTVVVKLITMDKD-SDVNTPIEFYITSGDSRSQFQIRSTG 1879
Query: 62 PL 63
+
Sbjct: 1880 EV 1881
>gi|5832705|dbj|BAA84069.1| Flamingo [Drosophila melanogaster]
Length = 3575
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 19/110 (17%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP+F + Y A+V E+ P+GT V+ + A D+D G+N++I+YS+ NE
Sbjct: 895 APIFENAPYSASVFEDAPVGTTVLVVSATDSD-VGVNAQITYSL------------NEES 941
Query: 63 LNHF-RIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+N P I+P T IV LDRE GY LT+ A D G P
Sbjct: 942 INGLGSPDPFSINPQTGA----IVTNAPLDRETTS-GYLLTVTAKDGGNP 986
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 42/112 (37%), Positives = 57/112 (50%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDNE 60
NAP F +YQA++ E+ +GT VI + A+D D G+N +I Y + D G F ID
Sbjct: 1004 NAPAFKSPLYQASILEDALVGTSVIQVAASDPD-VGLNGRIKYLLSDRDIEDGSFVID-- 1060
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PT GT + K LDRE + ++LT AVDKG+PP
Sbjct: 1061 ---------PTS---GTIRTN------KGLDRESVAV-FHLTAIAVDKGSPP 1093
Score = 42.7 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F +Q +V EN P+G +I ++A D+D G N++I+YS+ D DN
Sbjct: 686 NAPRFYTSQFQESVLENVPVGYNIIRVQAYDSD-EGANAEITYSISERD-------DN-- 735
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P +DP T + +K LDRE + + A D G PP+
Sbjct: 736 -------FPLAVDPRTGW----VQTIKPLDRE-EQGRFAFQVVAKDGGVPPK 775
Score = 42.0 bits (97), Expect = 0.078, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 25/115 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGT---LVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P FS+ Y V E+Q GT V ++A DAD G N+ I Y++ GG+ F+ID
Sbjct: 578 NYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQ-GNNAAIRYAIIGGNTQSQFSID 636
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ ++ ++K LD E + Y L +RA D G+P R
Sbjct: 637 SMSG--------------------DVSLVKPLDYE-SVRSYRLVIRAQDGGSPSR 670
Score = 41.6 bits (96), Expect = 0.098, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 15/119 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG-GDGLGYFTIDNE 60
++P F ++A+++E +G+ VITL+A D D G N++I Y + DG G D E
Sbjct: 461 HSPTFEAEQFEASIREGATVGSTVITLRATDQD-IGKNAEIEYGIEAVTDGAG-LAQDQE 518
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
P+ FRI + I LDRE + Y+L + A D + E AT
Sbjct: 519 MPI--FRI---------DSRSGVISTRSSLDRETSD-SYHLLVTAADLASAQSERRTAT 565
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F+ Y+A V E+QP GT V T+ A D P +S++ Y + G+ G F I ++
Sbjct: 791 NDPAFNPKYYEANVGEDQPPGTPVTTVTATD---PDEDSRLHYEITTGNTRGRFAITSQ 846
Score = 38.9 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT-IDNEGP 62
P F+ V EN P+G++V + A D D G+N+ + YS+ GGD F+ + G
Sbjct: 1112 PTFASDKITLYVPENSPVGSVVGEIHAHDPD-EGVNAVVHYSIIGGDDSNAFSLVTRPGS 1170
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVV 86
+ T++D + +K + +VV
Sbjct: 1171 ERAQLLTMTELDYESTRKRFELVV 1194
>gi|326673327|ref|XP_003199841.1| PREDICTED: protocadherin alpha-2-like [Danio rerio]
Length = 795
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 19/115 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y+A + EN P+G +IT++A+DAD G+N +I YS + N+G
Sbjct: 235 NIPVFTKSLYKARIPENAPVGASIITVQASDAD-EGLNGEIVYS--------FIKHINDG 285
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ +F I + I VL LD E + + ++A DKG PR +
Sbjct: 286 TIEYFAI---------NEVSGEITVLGKLDHE-SNNAVEIRVQARDKGPLPRAAH 330
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F V E +G A DAD G+NS SY + + +F++D +
Sbjct: 126 NSPTFPSSSLHLNVSEAAFVGERYALPNAFDADV-GINSVKSYKLSANE---HFSLDVQS 181
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
G + +V+ K LDRE P+ LTL AVD G PPR
Sbjct: 182 G-------------GEQSVSAELVLQKALDREKQPV-IRLTLTAVDGGKPPR 219
>gi|195591705|ref|XP_002085579.1| GD14851 [Drosophila simulans]
gi|194197588|gb|EDX11164.1| GD14851 [Drosophila simulans]
Length = 2585
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS Y ++EN+P+G + +T K +DAD + ++ +R G+ G F ++ +G
Sbjct: 1688 NAPIFSSANYSVVLQENRPLGYIFLTFKISDADEAPNTTPYTFDIRSGNEGGLFRLEQDG 1747
Query: 62 PLN 64
L+
Sbjct: 1748 SLS 1750
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F +Y+ V E+ +G+ ++ +KA D D +N ++Y++ GD +G F++D
Sbjct: 1583 NSPKFLQNLYRINVNEDIFVGSKILDVKATDED-SDVNGLVTYNIERGDNIGQFSVD--- 1638
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
K I V + LDRE Y L ++A D+G P R
Sbjct: 1639 -----------------PKNGTISVSRPLDRETIS-HYTLEIQACDQGDPQR 1672
Score = 43.1 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 25/111 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y+ +V E+ + TL+ + A D D G+N +I YS+ G+ YF I
Sbjct: 1374 NTPIFSMAQYRVSVPEDAQLNTLITKVHAMDKD-FGVNRQIKYSLM-GENHDYFKI---- 1427
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVL-KLLDREIAPLGYNLTLRAVDKGTP 111
K I+ L K LDRE L +NLT++A D G P
Sbjct: 1428 -----------------SKSTGIIRLDKSLDRETISL-FNLTVKAEDCGVP 1460
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS Y + EN GT V + A D G+N+ I Y + G+ G F +D+
Sbjct: 1478 NPPEFSMRQYSCKILENATHGTEVCKVYATSIDI-GVNADIHYFIMSGNEQGKFKMDSTT 1536
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
++V+ LD E++ Y LT++A+D GTPP
Sbjct: 1537 G--------------------DLVLNATLDYEMSKF-YFLTIQAIDGGTPP 1566
Score = 38.9 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG 51
N P+F + Y ATV + P GT+++ +KA D D N ++ Y ++ G+G
Sbjct: 345 NCPLFVNMPYYATVSIDDPKGTIIMQVKAVDLD-SAENGEVRYELKKGNG 393
>gi|431906995|gb|ELK11114.1| Cadherin-7 [Pteropus alecto]
Length = 832
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KA+DAD G N+++ Y + GDGLG F I
Sbjct: 305 NPPRFPRRSYQYNVPESLPVASVVARIKASDAD-IGANAEMEYKIVDGDGLGVFKI---- 359
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+D T +E I + K LD E A Y L + A +K PR
Sbjct: 360 ----------SVDKDT--QEGIITIQKDLDFE-AKTSYTLRIEAANKDADPR 398
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 196 NEPRFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 252
>gi|6049492|gb|AAF02618.1|AF172329_1 starry night protein [Drosophila melanogaster]
Length = 3579
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 19/110 (17%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP+F + Y A+V E+ P+GT V+ + A D+D G+N++I+YS+ NE
Sbjct: 894 APIFENAPYSASVFEDAPVGTTVLVVSATDSD-VGVNAQITYSL------------NEES 940
Query: 63 LNHF-RIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+N P I+P T IV LDRE GY LT+ A D G P
Sbjct: 941 INGLGSPDPFSINPQTGA----IVTNAPLDRETTS-GYLLTVTAKDGGNP 985
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 42/112 (37%), Positives = 57/112 (50%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDNE 60
NAP F +YQA++ E+ +GT VI + A+D D G+N +I Y + D G F ID
Sbjct: 1003 NAPAFKSPLYQASILEDALVGTSVIQVAASDPD-VGLNGRIKYLLSDRDIEDGSFVID-- 1059
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PT GT + K LDRE + ++LT AVDKG+PP
Sbjct: 1060 ---------PTS---GTIRTN------KGLDRESVAV-FHLTAIAVDKGSPP 1092
Score = 42.7 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F +Q +V EN P+G +I ++A D+D G N++I+YS+ D DN
Sbjct: 685 NAPRFYTSQFQESVLENVPVGYNIIRVQAYDSD-EGANAEITYSISERD-------DN-- 734
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P +DP T + +K LDRE + + A D G PP+
Sbjct: 735 -------FPLAVDPRTGW----VQTIKPLDRE-EQGRFAFQVVAKDGGVPPK 774
Score = 42.0 bits (97), Expect = 0.079, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 25/115 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGT---LVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P FS+ Y V E+Q GT V ++A DAD G N+ I Y++ GG+ F+ID
Sbjct: 577 NYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQ-GNNAAIRYAIIGGNTQSQFSID 635
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ ++ ++K LD E + Y L +RA D G+P R
Sbjct: 636 SMSG--------------------DVSLVKPLDYE-SVRSYRLVIRAQDGGSPSR 669
Score = 41.6 bits (96), Expect = 0.099, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 15/119 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG-GDGLGYFTIDNE 60
++P F ++A+++E +G+ VITL+A D D G N++I Y + DG G D E
Sbjct: 460 HSPTFEAEQFEASIREGATVGSTVITLRATDQD-IGKNAEIEYGIEAVTDGAG-LAQDQE 517
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
P+ FRI + I LDRE + Y+L + A D + E AT
Sbjct: 518 MPI--FRI---------DSRSGVISTRSSLDRETSD-SYHLLVTAADLASAQSERRTAT 564
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F+ Y+A V E+QP GT V T+ A D P +S++ Y + G+ G F I ++
Sbjct: 790 NDPAFNPKYYEANVGEDQPPGTPVTTVTATD---PDEDSRLHYEITTGNTRGRFAITSQ 845
Score = 38.9 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT-IDNEGP 62
P F+ V EN P+G++V + A D D G+N+ + YS+ GGD F+ + G
Sbjct: 1111 PTFASDKITLYVPENSPVGSVVGEIHAHDPD-EGVNAVVHYSIIGGDDSNAFSLVTRPGS 1169
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVV 86
+ T++D + +K + +VV
Sbjct: 1170 ERAQLLTMTELDYESTRKRFELVV 1193
>gi|301779007|ref|XP_002924921.1| PREDICTED: cadherin-7-like [Ailuropoda melanoleuca]
gi|281344096|gb|EFB19680.1| hypothetical protein PANDA_014331 [Ailuropoda melanoleuca]
Length = 785
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G N+++ Y + GDGLG F I
Sbjct: 258 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-IGTNAEMEYKIVDGDGLGIFKI---- 312
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+D T +E I + K LD E A Y L + A ++ PR
Sbjct: 313 ----------SVDKDT--QEGIITIQKDLDFE-AKTSYTLRIEAANRDADPR 351
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
>gi|195354342|ref|XP_002043657.1| GM19756 [Drosophila sechellia]
gi|194127825|gb|EDW49868.1| GM19756 [Drosophila sechellia]
Length = 1638
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS Y ++EN+P+G + +T K +DAD + ++ +R G+ G F ++ +G
Sbjct: 675 NAPIFSSANYSVVLQENRPLGYIFLTFKISDADETPNTTPYTFDIRSGNEGGLFRLEQDG 734
Query: 62 PLN 64
L+
Sbjct: 735 SLS 737
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F +Y+ V E+ +G+ ++ +KA D D +N ++Y++ GD +G F ID
Sbjct: 570 NSPKFLQNLYRINVNEDIFVGSKILDVKATDED-SDVNGLVTYNIERGDNIGQFLID--- 625
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
K I V + LDRE Y L ++A D+G P R
Sbjct: 626 -----------------PKNGTISVSRPLDRETIS-HYTLEIQACDQGDPQR 659
Score = 43.1 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 25/111 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y+ +V E+ + TL+ + A D D G+N +I YS+ G+ YF I
Sbjct: 361 NTPIFSMAQYRVSVPEDAQLNTLITKVHAMDKD-FGVNRQIKYSLM-GENHDYFKI---- 414
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVL-KLLDREIAPLGYNLTLRAVDKGTP 111
K I+ L K LDRE L +NLT++A D G P
Sbjct: 415 -----------------SKSTGIIRLDKSLDRETISL-FNLTVKAEDCGVP 447
Score = 39.7 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS Y + EN GT V + A D G+N+ I Y + G+ G F +D+
Sbjct: 465 NPPEFSMRQYSCKILENATHGTEVCKVYATSIDI-GVNADIHYFIMSGNEQGKFKMDS-- 521
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
++V+ LD E++ Y LT++A+D GTPP
Sbjct: 522 ------------------TTGDLVLNATLDYEMSKF-YFLTIQAIDGGTPP 553
>gi|410913755|ref|XP_003970354.1| PREDICTED: protocadherin gamma-A2-like [Takifugu rubripes]
Length = 813
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/45 (55%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAPVF+ VY+ATV EN IGTL+ + A+DAD G+N KI+Y++
Sbjct: 228 NAPVFTKPVYKATVPENALIGTLITKVSASDAD-KGLNGKITYTM 271
>gi|432879473|ref|XP_004073488.1| PREDICTED: protocadherin alpha-2-like [Oryzias latipes]
Length = 640
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/115 (36%), Positives = 55/115 (47%), Gaps = 21/115 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS +Y+ VKEN GTLV L A D D G+NSKI+YS
Sbjct: 206 NVPAFSKSLYKVRVKENAAPGTLVQILNATDLD-EGINSKITYSF--------------- 249
Query: 62 PLNHFRIVPTKI-DPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ P+KI D ++ E I V +D E P Y + ++A D+GT PR T
Sbjct: 250 -IKRGNFDPSKIFDLNSETGE--ITVKSNIDYEETP-AYEVRVQAKDRGTSPRST 300
Score = 41.6 bits (96), Expect = 0.094, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S VKE+ +G++V + +D D G +G+ TI
Sbjct: 314 NAPEISVTSLMTPVKEDAEVGSIVAFMTVSDKDA------------GSNGVTKCTIVGSA 361
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P F++ K +Y++VV LDRE + YN+T+RA D+G PP
Sbjct: 362 P---FKL------KSNYKNDYSLVVDGPLDRENISV-YNVTIRATDEGNPP 402
Score = 36.2 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
NAP F++ V VKEN P+G+++ +KA D D N+ I Y ++
Sbjct: 419 NAPKFTEPVINVYVKENSPVGSIISKIKAVDPDLEN-NANIYYKLQ 463
>gi|443692512|gb|ELT94105.1| hypothetical protein CAPTEDRAFT_139609 [Capitella teleta]
Length = 175
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 8/69 (11%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-----DGLG--Y 54
N+P+F +Y T+KEN P G+ ++T+ A DAD PG+N KI+YS++G + LG
Sbjct: 29 NSPIFVKPLYTDTIKENTPGGSSIVTVLATDAD-PGLNGKITYSIKGNYVIDKNDLGDLL 87
Query: 55 FTIDNEGPL 63
F +D+E L
Sbjct: 88 FQVDSESGL 96
>gi|47551325|ref|NP_999974.1| cadherin-23 precursor [Danio rerio]
gi|46452161|gb|AAS98176.1| cadherin 23 [Danio rerio]
Length = 3366
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 27/110 (24%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NEGP 62
P FS+ V+ +V EN+P+GT VIT+KA D D G N+ ++YS++G G F++D + G
Sbjct: 2510 PRFSERVFTTSVFENEPVGTSVITMKATDLD-EGENALLTYSLQGP-GADAFSLDPDTGL 2567
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ R+ L+ +R +NLT+ A D+G PP
Sbjct: 2568 IRSLRL------------------LQSFER------FNLTVVATDQGRPP 2593
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 26/112 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF +YQ ++ E+ +GT++++++A DAD G+ S I Y + G+G
Sbjct: 2401 NNPVFQQPLYQKSIFEDVALGTIIVSVRATDAD-SGLFSVIEYGLVDGEG---------- 2449
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK--GTP 111
F I PT D I +L LDRE Y LT A D G+P
Sbjct: 2450 ---KFGITPTTGD---------IYILSALDRETKD-RYTLTAYARDNPGGSP 2488
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 54/121 (44%), Gaps = 22/121 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPV+ D YQA V E PI T VIT+ A D D G +G ++I+ E
Sbjct: 778 NAPVWRDEPYQANVVEMSPIDTDVITVFAVDPD------------YGDNGTVVYSINPEN 825
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVL--KLLDREIAPLGYNLTLRAVDKGTPP-RETYKA 118
P I+ T K + VL + D A L + + A D+GTPP R + A
Sbjct: 826 PF-------YTINRNTGKIRTSGAVLDRESQDARSAQLMRTIIISATDRGTPPLRSSASA 878
Query: 119 T 119
T
Sbjct: 879 T 879
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P+F Y+ +V EN P GT ++ ++A DAD G N K+ Y + G+ G F++D+
Sbjct: 1102 NRPIFLQNSYETSVLENIPRGTSILQVQATDAD-QGENGKVLYRILSGNN-GQFSMDS 1157
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 44/98 (44%), Gaps = 23/98 (23%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN-EGPLNHFRIVPTKI 73
+ E QP G V T+KA DAD G N K+ YS+ GD F I + EG L + +
Sbjct: 1757 ITEGQP-GPRVWTVKATDADS-GSNGKVEYSITAGDLKNEFVISSVEGELRVRKDIE--- 1811
Query: 74 DPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
LDRE YN+T+ A D GTP
Sbjct: 1812 ----------------LDRETIAY-YNITITAKDLGTP 1832
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 17/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+ + +V E + T +I ++A D+D G N+ ++YS+ G+ G F I+
Sbjct: 1850 NDPILLNLPANTSVSEGAAVQTFIIQVRAQDSD-SGRNALLTYSITAGNSDGAFYINETS 1908
Query: 62 -------PLNHFRIVPTKI---------DPGTKKKEYNIVVLKLLD 91
PL+ R+ + +P +++ ++ + LLD
Sbjct: 1909 GVVQVNRPLDRERVAEYSLTITVKDNPDNPRIARRDSELLTVTLLD 1954
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 22/106 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F VY +++E+ P LV+ L D D G+N+++SY + G+ G F++
Sbjct: 997 PTFFPSVYNVSLEESVPRDYLVVRLNCTDND-AGLNAELSYFITAGNQDGKFSV------ 1049
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
FR + G LDRE Y L + A+D G
Sbjct: 1050 -GFRTGVVRTVVG-------------LDRETQA-SYRLVIEAIDNG 1080
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLK----AADADPPGMNSKISYSVRGGDGLGYFTI 57
N P+FS Y+ + EN P GT V+ L A D D G+N+ +SY + G + F+I
Sbjct: 1958 NRPIFSQSSYRGEISENSPTGTTVLILNGPVLAEDKD-IGVNAVVSYGLLGT-RVDIFSI 2015
Query: 58 DN 59
D+
Sbjct: 2016 DS 2017
>gi|432857205|ref|XP_004068581.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like
[Oryzias latipes]
Length = 2980
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 56/115 (48%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
N+P F Y +V E+ P+ T V+ + A D D G+N ++ Y+ +GG DG G F I++
Sbjct: 891 NSPRFLRDHYVGSVMEDVPVFTSVVQVSAIDRD-SGLNGRVFYTFQGGEDGDGDFIIEST 949
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ + L+ LDRE P+ YNL AVDKG P +T
Sbjct: 950 SGI--------------------VRTLRRLDRENVPV-YNLQAFAVDKGVPALKT 983
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F +QATV EN P+G +I ++A DAD G NS++ Y + F+I+N
Sbjct: 581 NAPIFVSTPFQATVLENVPLGYSIIHIQAVDAD-SGENSRLEYQLTETTPHFPFSINNST 639
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
IVV LDRE YN + A D G P
Sbjct: 640 GW--------------------IVVAAELDRESVDF-YNFGVEARDHGYP 668
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS+ Y + E++ T ++ L A D D G N+ + +S+ G+ G F ID +
Sbjct: 475 NAPQFSEKRYVVQIPEDKTPNTEILQLTATDKD-RGSNAVVHFSIMSGNTRGQFYIDAQ- 532
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+D ++ LD E A Y L +RA D G PP
Sbjct: 533 --------TGKMD-----------LVSYLDYE-ANKEYTLRIRAQDGGRPP 563
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 20/116 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F +YQ +V ENQP GT V+ LKA D D G ++ Y + + +
Sbjct: 261 PQFQPPMYQVSVAENQPAGTAVVQLKAVDVD-EGDAGRLEYFIEA--------LFDSRSN 311
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
N F +DP + + +++LDRE + + AVD G+ PR T AT
Sbjct: 312 NLF-----AVDPASGA----VTTVEVLDRETKDT-HVFRVTAVDHGS-PRRTAMAT 356
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
PVF Y + E++P+GT V+ + A D D G N++I+Y + D + F ID++
Sbjct: 790 PVFQSSHYTVNINEDRPLGTTVVVISATDED-IGENARITYFM--DDNVPQFDIDSD 843
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLG-YFTIDN 59
PVF Y+ +++EN IG V+T++A D D P N I Y + +G F ID+
Sbjct: 369 PVFEQQDYKESIRENLEIGYEVLTVRATDGDAPA-NGNILYHILNSNGSNDVFEIDS 424
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F+ Y + E+ +GT V+T+ A D D +NS ++Y + G+ F+I ++
Sbjct: 686 NNPEFTQKAYYMRLNEDAAVGTSVVTVSAVDQD---INSVVTYQISSGNTRNRFSITSQ 741
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVF + V+EN PIG +V + A D D G N++I Y + G+ F +D
Sbjct: 997 NPPVFEKDEFDIMVEENSPIGLVVGHISATDPD-EGSNAQIMYQIVEGNIPEVFMLD 1052
>gi|64654564|gb|AAH96363.1| CDH5 protein [Homo sapiens]
gi|106879446|gb|AAI17521.1| CDH5 protein [Homo sapiens]
Length = 669
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ ++ A+V E+ +GT VI++ A DAD P + S + G YF IDN G
Sbjct: 147 NWPVFTHRLFNASVPESSAVGTSVISVTAVDADDPTVGDHASVMYQILKGKEYFAIDNSG 206
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
+ I TK K+ Y IVV
Sbjct: 207 RI----ITITKSLDREKQARYEIVV 227
>gi|64653387|gb|AAH96365.1| CDH5 protein [Homo sapiens]
Length = 662
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ ++ A+V E+ +GT VI++ A DAD P + S + G YF IDN G
Sbjct: 147 NWPVFTHRLFNASVPESSAVGTSVISVTAVDADDPTVGDHASVMYQILKGKEYFAIDNSG 206
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
+ I TK K+ Y IVV
Sbjct: 207 RI----ITITKSLDREKQARYEIVV 227
>gi|431918261|gb|ELK17488.1| Protocadherin-23 [Pteropus alecto]
Length = 3338
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 17/108 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F VY AT+ E+ P+G + +KA+DAD G+N I YS+ G + G
Sbjct: 648 NEPIFQRQVYNATLAEHAPVGHCFLQVKASDAD-AGLNGLIEYSLYDG-------FQSYG 699
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
F+I P ++ I V + +DRE P Y+L ++A D G
Sbjct: 700 APQAFQIDP---------RDGQICVSQDIDREKDPDTYDLLVKARDGG 738
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 22/108 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F +Y+A+VKEN+ G V ++A D D G NSK+ + + G
Sbjct: 1713 PAFKQHLYEASVKENRNPGEFVTRVEAVDRD-SGTNSKLQFEIMPGAS------------ 1759
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
FR+ D G +V LDRE+ + + L +R D G P
Sbjct: 1760 --FRLFEINPDTGV------VVTTATLDREVQEV-FILRVRVRDGGVP 1798
Score = 38.5 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++P F YQ++V+E+ +GT+V+ L A D D G+N + Y + + G FTID
Sbjct: 1920 HSPFFPVLHYQSSVREDAQVGTVVLVLSAVDKD-EGLNGQTEYFLT-DEASGAFTID 1974
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 13/102 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N P F+ Y A VKE+ P+G+ + + A+D D G +++I Y + G+ G+F ++ +
Sbjct: 2653 NPPKFNTVKYHAHVKESTPLGSHITVVSASDCD-VGSHAEILYHIISGNEKGHFHLEEKT 2711
Query: 61 ------GPLNH-----FRIVPTKIDPGTKKKEYNIVVLKLLD 91
PL++ F + D K + +V + +LD
Sbjct: 2712 GVLYLIKPLDYEETIKFTLTIQASDEEKKHFSFAVVFVSVLD 2753
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 13/69 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR---------GGDGL 52
N PVF Y+A V+E+ P GT V ++AAD D G N + Y +R G + L
Sbjct: 285 NPPVFEQGEYRAAVREDAPPGTEVCRVRAADRD-LGPNGHVRYRIRARQTPGAGSGSEAL 343
Query: 53 G---YFTID 58
G YF ++
Sbjct: 344 GDAAYFAVE 352
Score = 36.2 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 11/110 (10%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP F+ Y ++ E+ IG +++ D D N+++ YS+ G+ F ++
Sbjct: 2538 APEFAVEYYNLSLSEDARIGVTLVSFSTIDHDWTRENTRVEYSIISGNSQNNFHVETSFI 2597
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ + K+ +V+L LDRE + + L + A D G PP
Sbjct: 2598 HSEYPF----------KQVGYLVLLHNLDRETSA-SHKLVILASDHGCPP 2636
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
+P F D ++EN P+GTLV A D D +NS+I Y +
Sbjct: 1498 SPSFRDEFVVINIEENVPVGTLVHVFNAKDGDGSFLNSRIQYFI 1541
>gi|443692511|gb|ELT94104.1| hypothetical protein CAPTEDRAFT_139522 [Capitella teleta]
Length = 175
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 8/69 (11%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-----DGLG--Y 54
N+P+F +Y T+KEN P G+ ++T+ A DAD PG+N KI+YS++G + LG
Sbjct: 29 NSPIFVKPLYTDTIKENTPGGSSIVTVLATDAD-PGLNGKITYSIKGNYVIDKNDLGDLL 87
Query: 55 FTIDNEGPL 63
F +D+E L
Sbjct: 88 FQVDSESGL 96
>gi|242004578|ref|XP_002423159.1| class D atypical G-protein coupled receptor GPRstn1, putative
[Pediculus humanus corporis]
gi|212506116|gb|EEB10421.1| class D atypical G-protein coupled receptor GPRstn1, putative
[Pediculus humanus corporis]
Length = 3235
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 20/107 (18%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+PVF + Y A V E+ P+GT V+ ++A+D D G N++I+YS+ G F++D+
Sbjct: 874 SPVFENAPYTAQVFEDAPVGTTVLVVQASDGD-VGQNAQITYSLTSG---AEFSVDS--- 926
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
I+P T +V KLLDRE Y LT+ A D G
Sbjct: 927 --------FSINPQTGA----VVTTKLLDRETVS-SYLLTVTARDGG 960
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 18/110 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVFS Y + E+ +GT V+ ++A D D G+N +I Y+ G +DN
Sbjct: 974 NSPVFSSATYSGVISEDALVGTSVLQVQATDID-SGLNGRIRYAFNPPGSSG--AVDNS- 1029
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
F I PT G + N LDRE P Y+L + A+D+GTP
Sbjct: 1030 ----FVIDPTL---GVIRTSKN------LDRESVPF-YSLKVYAIDRGTP 1065
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N PVF+ +Y+ V E P GTLV ++ A D P NS++ Y + G+ G F+I ++
Sbjct: 770 NDPVFNPKIYEVVVSEQDPPGTLVASVTATD---PDENSRLHYEITNGNVRGRFSITSQ 825
Score = 42.7 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 39/111 (35%), Positives = 54/111 (48%), Gaps = 26/111 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+APVF Y+A V+E IGT+VIT++A D D N++I YS + D F ID +
Sbjct: 447 HAPVFESDSYEAAVREGVAIGTIVITVRATDQD-INKNAEIVYSFKDPD--EEFNIDGKT 503
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+V T+ K LDRE+ Y LT+ A D +PP
Sbjct: 504 G-----VVTTR---------------KALDREVTA-NYALTVIASD--SPP 531
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 24/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQ--PIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P F++ Y +V E+ + ++ T+KA DAD G N+ I Y + GG+ F ID+
Sbjct: 552 NYPQFTERTYTVSVPEDMDASLSPVIATVKATDADE-GKNAAIRYVIIGGNTQAQFLIDS 610
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
++++ K LD E+ Y L +RA D G P +
Sbjct: 611 --------------------LTGDVILAKPLDYEVLK-SYRLVIRAQDGGNPSK 643
Score = 39.3 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF + EN PIG+ V ++A D D G+N+ I YS+ GG+ F++
Sbjct: 1085 PVFESEKIVFYIPENSPIGSTVGEVRAKDPD-EGVNAIIQYSIIGGEDSSSFSLVTRPGW 1143
Query: 64 NHFRIVPT-KIDPGTKKKEYNIVV 86
+ I+ T +D + +K+Y +V+
Sbjct: 1144 DKAEILTTVDLDYESPRKKYEMVI 1167
Score = 38.9 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 16/112 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F ++Q +V E+ P+G ++ ++A D+D G N + YS+ D G T NE
Sbjct: 659 NEPRFYSTLFQESVLESVPVGYSIVKVQAYDSD-EGANVALKYSLSERDEFG--TPTNEL 715
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
PL ID + I K LDRE+ Y + D G PP+
Sbjct: 716 PLT--------IDSVSGW----IQTTKPLDREMTS-KYQFQVIVEDGGEPPK 754
>gi|116110536|gb|ABJ74647.1| stan [Drosophila miranda]
gi|116110538|gb|ABJ74648.1| stan [Drosophila miranda]
gi|116110540|gb|ABJ74649.1| stan [Drosophila miranda]
gi|116110542|gb|ABJ74650.1| stan [Drosophila miranda]
gi|116110544|gb|ABJ74651.1| stan [Drosophila miranda]
gi|116110546|gb|ABJ74652.1| stan [Drosophila miranda]
gi|116110548|gb|ABJ74653.1| stan [Drosophila miranda]
gi|116110550|gb|ABJ74654.1| stan [Drosophila miranda]
gi|116110552|gb|ABJ74655.1| stan [Drosophila miranda]
gi|116110554|gb|ABJ74656.1| stan [Drosophila miranda]
gi|116110558|gb|ABJ74658.1| stan [Drosophila miranda]
gi|116110560|gb|ABJ74659.1| stan [Drosophila miranda]
gi|116110562|gb|ABJ74660.1| stan [Drosophila miranda]
gi|116110564|gb|ABJ74661.1| stan [Drosophila miranda]
gi|116110566|gb|ABJ74662.1| stan [Drosophila miranda]
gi|116110568|gb|ABJ74663.1| stan [Drosophila miranda]
gi|116110570|gb|ABJ74664.1| stan [Drosophila miranda]
Length = 549
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 58/112 (51%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDNE 60
NAPVF + +YQ+++ E+ +GT VI + A D D G+N +I Y + D G F ID
Sbjct: 189 NAPVFKNPLYQSSILEDALVGTSVIQVSACDPD-IGLNGRIKYLLSDRDVEDGSFLID-- 245
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PT GT + K LDRE + Y+LT AVDKG+PP
Sbjct: 246 ---------PTS---GTVRTN------KGLDRESVAV-YHLTAIAVDKGSPP 278
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 19/110 (17%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP+F + Y A+V E+ P+GT V+ + A D+D G+N++I+YS+ NE
Sbjct: 80 APIFENAPYSASVFEDAPVGTTVLVVSATDSD-VGINAQITYSL------------NEES 126
Query: 63 LNHF-RIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+N P I+P T IV LDRE GY LT+ + D G+P
Sbjct: 127 INGLGSPDPFSINPQTGA----IVTNAPLDRETTS-GYLLTVTSKDGGSP 171
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT-IDNEGP 62
P F+ V EN P+G++V + A D D G+N+ + YS+ G D F+ + G
Sbjct: 297 PTFASDKITLYVPENSPVGSVVGEIHAHDPD-EGVNAVVHYSIIGCDDSNSFSLVTRPGS 355
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVV 86
+ T++D + +K + +VV
Sbjct: 356 ERAQLLTMTELDYESSRKRFELVV 379
>gi|109730054|gb|AAH96364.3| CDH5 protein [Homo sapiens]
Length = 669
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ ++ A+V E+ +GT VI++ A DAD P + S + G YF IDN G
Sbjct: 147 NWPVFTHRLFNASVPESSAVGTSVISVTAVDADDPTVGDHASVMYQILKGKEYFAIDNSG 206
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
+ I TK K+ Y IVV
Sbjct: 207 RI----ITITKSLDREKQARYEIVV 227
>gi|47227102|emb|CAG00464.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2970
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 41/112 (36%), Positives = 53/112 (47%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
NAPVF Y TV E+ +GT V+ + A D G+N++ISY +R G+ LG F ID N
Sbjct: 1981 NAPVFQRRDYGVTVPEDVAVGTEVLRVLATSVDI-GLNAEISYRIRSGNELGKFNIDTNL 2039
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G +I V LD E+ Y LT+ A D G PP
Sbjct: 2040 G---------------------SIFVADDLDFEVCK-DYYLTIEAWDGGNPP 2069
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 39/110 (35%), Positives = 54/110 (49%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS +Y V E+ +G +V + A D D G N +I+YS+ GD
Sbjct: 2086 NAPTFSQDIYNVLVSEDASVGQMVTRVSAEDLDSQG-NGRITYSILKGD----------- 2133
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
NHF IDP T + N K LDRE+ Y+L+++A D G+P
Sbjct: 2134 RNNHFW-----IDPVTGILKVN----KRLDRELVSR-YSLSVQAFDSGSP 2173
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ VY A E+ P GT V+ + A D D G+N +++Y++ G+ F ID
Sbjct: 275 NIPYFTSTVYDAVAYESSPFGTSVLQVTALDKD-NGINGQLTYTIEAGNTGSVFGIDAAT 333
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVDKGTPP 112
L I + + LD + +G Y LT+R D G PP
Sbjct: 334 GL--------------------IFIARALD--LTSVGFYTLTVRVSDSGFPP 363
Score = 40.0 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 18/92 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F +Y+ VKE+ +G +V LK +D D N +S+ + GG+ G F +
Sbjct: 1669 NPPRFERELYRGAVKESDSLGEVVAVLKTSDRDGTDQNRLVSFYISGGNPRGVFGL---A 1725
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
P+ + E+ + V LLDRE
Sbjct: 1726 PV---------------QGEWKVYVSGLLDRE 1742
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+ + VY A+ E+ P+ ++T+ A DAD G +++I YS+ G ++ N G
Sbjct: 1774 NRPICNQAVYSASFPEDIPVNKGILTVAATDAD-SGSSAEIQYSLFGIGVEDFYMDANTG 1832
Query: 62 PLNHFRIVPTKIDPGTK 78
L I+ + P K
Sbjct: 1833 ELRTATIMDRETTPSYK 1849
Score = 36.2 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
N P+F Y ATV E PIGT V+ ++A D D G N ++ Y
Sbjct: 1558 NNPLFETNTYVATVMEGMPIGTRVVQVRALDPD-WGANGQVCY 1599
>gi|410913729|ref|XP_003970341.1| PREDICTED: protocadherin alpha-8-like [Takifugu rubripes]
Length = 797
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 25/118 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG---LGYFTID 58
N P+FS +Y+ + EN +GT VIT+ A DAD G+N +I YS+R D L F ID
Sbjct: 235 NIPLFSQALYKTKIPENTSLGTRVITVNATDAD-EGLNGEILYSLRSKDQDRVLDIFEID 293
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+E + V ID K+ + + + A DKG PP +
Sbjct: 294 SESGV---ITVKGNIDFEDKR------------------AFEIRVEASDKGQPPMSAH 330
>gi|351713431|gb|EHB16350.1| Protocadherin alpha-3, partial [Heterocephalus glaber]
Length = 666
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 52/114 (45%), Gaps = 25/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR---GGDGLGYFTID 58
NAP F VY+ + EN P GTLV+ + A+D D G+N I YS + L F +D
Sbjct: 239 NAPTFERTVYKVRLFENAPNGTLVVVVNASDLD-EGVNKDIIYSFNTDISAEILSKFCLD 297
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+N F IV ID +K E Y + + A DKG PP
Sbjct: 298 ---PVNGFIIVKGNID--FEKTE----------------SYEIQVEATDKGNPP 330
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 40/116 (34%), Positives = 57/116 (49%), Gaps = 24/116 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTID 58
NAPVF+ Y VKEN P G+ + T+ A DAD N+ +SYS+ R G
Sbjct: 452 NAPVFAQPEYTVFVKENNPPGSHIFTVCARDADAQ-ENALVSYSLVERRVG--------- 501
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR-EIAPLGYNLTLR-AVDKGTPP 112
E L+ + V + G + L+ LDR E+ L + ++ R +VDKG PP
Sbjct: 502 -ERALSSY--VSVHAESG------KVFALQPLDREELELLQFQVSARDSVDKGNPP 548
>gi|116110556|gb|ABJ74657.1| stan [Drosophila miranda]
Length = 549
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 58/112 (51%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDNE 60
NAPVF + +YQ+++ E+ +GT VI + A D D G+N +I Y + D G F ID
Sbjct: 189 NAPVFKNPLYQSSILEDALVGTSVIQVSACDPD-IGLNGRIKYLLSDRDVEDGSFLID-- 245
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PT GT + K LDRE + Y+LT AVDKG+PP
Sbjct: 246 ---------PTS---GTVRTN------KGLDRESVAV-YHLTAIAVDKGSPP 278
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 19/110 (17%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP+F + Y A+V E+ P+GT V+ + A D+D G+N++I+YS+ NE
Sbjct: 80 APIFENAPYSASVFEDAPVGTTVLVVSATDSD-VGINAQITYSL------------NEES 126
Query: 63 LNHF-RIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+N P I+P T IV LDRE GY LT+ + D G+P
Sbjct: 127 INGLGSPDPFSINPQTGA----IVTNAPLDRETTS-GYLLTVTSKDGGSP 171
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT-IDNEGP 62
P F+ V EN P+G++V + A D D G+N+ + YS+ G D F+ + G
Sbjct: 297 PTFASDKITLYVPENSPVGSVVGEIHAHDPD-EGVNAVVHYSIIGCDDSNSFSLVTRPGS 355
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVV 86
+ T++D + +K + +VV
Sbjct: 356 ERAQLLTMTELDYESSRKRFELVV 379
>gi|327269958|ref|XP_003219759.1| PREDICTED: cadherin-7-like [Anolis carolinensis]
Length = 785
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V LKAADAD G N+++ Y + GDGLG F
Sbjct: 258 NPPRFPRRSYQYNVPESLPVASVVARLKAADAD-MGPNAEMEYKIVDGDGLGVF------ 310
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
K+ + +E I + K LD E A Y L + A +K PR
Sbjct: 311 ----------KVLVDKETQEGIITIQKELDYE-AKASYTLRIEAANKQVDPR 351
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 24/111 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNEGP 62
PVF+ +Y V E +GT++ T+ A DP NS + YS+ R D YF ID
Sbjct: 375 PVFTSRLYTMVVSEAAKVGTVIGTVAA--HDPDASNSPVRYSIDRNTDLERYFNIDANSG 432
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I K LDRE + +N+T+ A++ P +
Sbjct: 433 V--------------------ITTAKPLDRETNAV-HNITVLAMESQNPSQ 462
>gi|426382415|ref|XP_004057800.1| PREDICTED: cadherin-5 [Gorilla gorilla gorilla]
Length = 784
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ ++ A+V E+ +GT VI++ A DAD P + S + G YF IDN G
Sbjct: 147 NWPVFTHRLFNASVPESSAVGTSVISVTAVDADDPTVGDHASVMYQILKGKEYFAIDNSG 206
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
+ I TK K+ Y IVV
Sbjct: 207 RI----ITITKSLDREKQARYEIVV 227
>gi|599834|emb|CAA56306.1| VE-cadherin [Homo sapiens]
gi|6483308|dbj|BAA87418.1| cadherin-5 [Homo sapiens]
gi|119603415|gb|EAW83009.1| cadherin 5, type 2, VE-cadherin (vascular epithelium) [Homo
sapiens]
Length = 784
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ ++ A+V E+ +GT VI++ A DAD P + S + G YF IDN G
Sbjct: 147 NWPVFTHRLFNASVPESSAVGTSVISVTAVDADDPTVGDHASVMYQILKGKEYFAIDNSG 206
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
+ I TK K+ Y IVV
Sbjct: 207 RI----ITITKSLDREKQARYEIVV 227
>gi|29593|emb|CAA42468.1| cadherin-5 [Homo sapiens]
Length = 780
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ ++ A+V E+ +GT VI++ A DAD P + S + G YF IDN G
Sbjct: 143 NWPVFTHRLFNASVPESSAVGTSVISVTAVDADDPTVGDHASVMYQILKGKEYFAIDNSG 202
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
+ I TK K+ Y IVV
Sbjct: 203 RI----ITITKSLDREKQARYEIVV 223
>gi|166362713|ref|NP_001786.2| cadherin-5 preproprotein [Homo sapiens]
gi|322510142|sp|P33151.5|CADH5_HUMAN RecName: Full=Cadherin-5; AltName: Full=7B4 antigen; AltName:
Full=Vascular endothelial cadherin; Short=VE-cadherin;
AltName: CD_antigen=CD144; Flags: Precursor
gi|1814076|gb|AAB41796.1| vascular endothelial cadherin [Homo sapiens]
gi|168278032|dbj|BAG10994.1| cadherin-5 precursor [synthetic construct]
Length = 784
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ ++ A+V E+ +GT VI++ A DAD P + S + G YF IDN G
Sbjct: 147 NWPVFTHRLFNASVPESSAVGTSVISVTAVDADDPTVGDHASVMYQILKGKEYFAIDNSG 206
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
+ I TK K+ Y IVV
Sbjct: 207 RI----ITITKSLDREKQARYEIVV 227
>gi|332846093|ref|XP_523383.3| PREDICTED: cadherin-5 isoform 4 [Pan troglodytes]
gi|397506452|ref|XP_003823741.1| PREDICTED: cadherin-5 [Pan paniscus]
Length = 784
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ ++ A+V E+ +GT VI++ A DAD P + S + G YF IDN G
Sbjct: 147 NWPVFTHRLFNASVPESSAVGTSVISVTAVDADDPTVGDHASVMYQILKGKEYFAIDNSG 206
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
+ I TK K+ Y IVV
Sbjct: 207 RI----ITITKSLDREKQARYEIVV 227
>gi|326671264|ref|XP_003199405.1| PREDICTED: protocadherin Fat 3-like, partial [Danio rerio]
Length = 3394
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 50/112 (44%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+N P FS+F + +VKEN GT V+ + A D D G + I YS+ GLG F+ID E
Sbjct: 1035 LNEPYFSEFAVRGSVKENSRHGTSVLQVTAQD-DDKGRDGVIRYSINARSGLGRFSIDEE 1093
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I LD E A Y LT+ A D+G P
Sbjct: 1094 TGM--------------------IYTADSLDCE-AQDSYWLTVYATDRGVVP 1124
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P FS+ +Y + E+ IG V L A D D +N +I+YS+ GD F
Sbjct: 3209 NSPSFSEEIYNVLISEDIAIGETVTRLFAEDLDSQ-INGRITYSILKGDRENQF------ 3261
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
IDP T + N K LDRE Y+L+++A D G+P + T
Sbjct: 3262 ----------WIDPVTGLLKVN----KALDRETVS-SYSLSVQAFDSGSPAKST 3300
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P+F+ Y+ V E+ PIGT+++TL A D D G N I+YS+ L + G
Sbjct: 466 NSPIFTSTFYEVFVNESIPIGTVILTLSAVD-DDKGENGCITYSIASLQPLPFIINQTTG 524
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
L + K LD E + Y +RA D G+P R
Sbjct: 525 EL---------------------MTSKELDFESSLETYVFAVRASDWGSPYR 555
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 24/110 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+F+ Y +TV E+ P GT + + A D D G N +I YS+ G+ G F ID PL
Sbjct: 1561 PIFTQTNYDSTVFESAPPGTSALQVIALDRD-FGRNREIVYSIDAGNTGGIFGID---PL 1616
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVDKGTPP 112
+ V ++D + +G Y LT+RA D GTPP
Sbjct: 1617 SGIISVARELD-------------------LTTVGFYTLTVRATDGGTPP 1647
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 24/113 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDNE 60
APVF + Y T+ EN IG+ VI L A D D N+ ISY + G + YF ID+
Sbjct: 2279 APVFRNTSYSTTLPENTMIGSSVIRLLATDKDSEK-NNVISYEILSDGFNSTDYFHIDST 2337
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
L ++ +LLD E+ ++ +RA D G+P +
Sbjct: 2338 SGL--------------------LLTARLLDYELTS-SFSFIVRATDNGSPSQ 2369
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP+ S+ +Y + V EN P V+ ++A D D S+++Y + G+ +F+ID
Sbjct: 1141 NAPLTSEPIYHSYVMENSPKDVSVVRVQAQDPDVTASESRLTYRITAGNPQNFFSID 1197
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+PVFS Y A V+EN P G+ VI ++A D D G+ +I YS G F I +G
Sbjct: 2488 SPVFSQRFYLAEVRENAPAGSRVIQVRATDED-SGIFGQIMYSFINDLGKSQFNIGADG 2545
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N P F Y+ V+E+ P+G +V L D D N +S+ + GG+ G F +
Sbjct: 2922 NPPTFEREYYRGAVRESDPLGEVVSVLSTRDGDSSDQNRLVSFHITGGNPKGVFAL 2977
Score = 38.5 bits (88), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N+P FS Y A V EN IGT VI + A+D D G+N +ISY++ L F+I++E
Sbjct: 824 NSPEFSLESYTAVVTENAAIGTEVIQVTASDND-LGVNGEISYTLLTNTPL--FSINSE 879
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F Y+ ++K N P+G+LV ++A D D G N +++YS+
Sbjct: 2591 NAPRFRAMEYRVSIKANVPMGSLVTQIQAQDPD-SGDNGRVAYSL 2634
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F+ +Y+A V E P G +V ++A+D D S + YS+ GD F ID++
Sbjct: 2385 NPPSFNQPLYEAFVSELAPRGHIVTCIQASDLDSSDAES-LRYSILSGDEKMNFVIDSQ 2442
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG 49
N P+FS+ Y+ V E+ P T V+ ++A D D +K+SYS+
Sbjct: 1453 NTPIFSEHTYEVLVSEDTPADTEVLRVRARDRDE---RAKLSYSIHSS 1497
>gi|91091450|ref|XP_972739.1| PREDICTED: similar to cadherin [Tribolium castaneum]
gi|270001274|gb|EEZ97721.1| hypothetical protein TcasGA2_TC011230 [Tribolium castaneum]
Length = 1294
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD-PPGMNSKISYSVRGGDGLGYFTIDN 59
N P FS YQ T++EN P GT ++ ++A+D+D PG SKI Y GDG +F++D+
Sbjct: 466 NVPEFSQEEYQGTIQENAPFGTTLLRVEASDSDRAPG--SKIKYVRLYGDGSDFFSLDS 522
>gi|326670102|ref|XP_001922712.3| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 [Danio
rerio]
Length = 3584
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/116 (36%), Positives = 54/116 (46%), Gaps = 25/116 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
NAP F YQ V E+ P T V+ + A D D N ++ Y+ + G DG G FTI+
Sbjct: 1276 NAPQFLSPRYQGGVSEDAPPFTSVLQISATDRDAHA-NGRVQYTFQNGEDGDGDFTIE-- 1332
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIV-VLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
PT IV ++ LDRE P Y LT AVD+G PP+ T
Sbjct: 1333 ---------PTS----------GIVRTVRRLDRESVPF-YELTAFAVDRGVPPQRT 1368
Score = 43.1 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 19/108 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F + YQ V ENQP GT VI + A D D G ++SYS+ + N +
Sbjct: 644 PQFPQYNYQVQVAENQPPGTSVIAMTAEDHD-AGEAGRLSYSMA--------PLMNSRSM 694
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
++F +IDP T + +LDRE L Y + A D G+P
Sbjct: 695 DYF-----QIDPITGL----LTTTHILDREHMDLHY-FRVTAADHGSP 732
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAPVF ++ VKEN +G++V + A D D G N++I Y + G+ F +D
Sbjct: 1382 NAPVFPADDFEVLVKENSAVGSVVAQITATDPD-EGPNAQIMYQIVEGNIPEIFQMD 1437
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG 48
N P+F +QATV E+ PIG ++ ++A D D G N+++ Y + G
Sbjct: 966 NPPIFVSTPFQATVLESAPIGHSILHIQAIDTD-NGDNARLEYRLTG 1011
Score = 36.2 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN-E 60
N P FS Y V+E+ + ++ + A D D G N+ + Y++ G+ G F ID+
Sbjct: 860 NVPQFSQKRYVVAVREDVRPHSEILRISATDQDKDG-NAAVHYNIISGNSRGQFAIDSVT 918
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G + V +D T+++ Y L LRA D G PP
Sbjct: 919 GEIQ----VVAPLDFETERE------------------YTLRLRAQDNGRPP 948
Score = 35.8 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y + E+ +GT V+++ A D D +NS ++Y + GG+ F I G
Sbjct: 1071 NRPEFLQKEYYVRLNEDAAVGTSVVSVTAVDRD---VNSAVTYQITGGNTRNRFAISTAG 1127
>gi|390335701|ref|XP_785548.3| PREDICTED: cadherin-23-like [Strongylocentrotus purpuratus]
Length = 1302
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 52/112 (46%), Gaps = 24/112 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGY-FTIDNEGP 62
P FSD Y + E +GT V + A D D P GD L Y T N+G
Sbjct: 519 PRFSDNEYTVFINEAAQVGTTVTRITATDEDIP-----------EGDRLTYIITAGNQG- 566
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
HF+I P D + +L+ LDRE+ +NLT+RA D+G PP+
Sbjct: 567 -GHFQINPVSGD---------VTLLRQLDRELES-QHNLTIRATDQGAPPQS 607
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 19/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F D Y+ ++ EN P+G+ ++T++A D D G+N+ + Y + G+ F +D +G
Sbjct: 934 NAPTFRDISYEKSIFENHPLGSNILTVQADDLD-LGVNAVVLYRIISGNNNNLFNVDGQG 992
Query: 62 PLN-------------HFRIVP---TKIDPGTKKKEYNIVVLKLLDREIAPL 97
+N +F IV + + GT + I++L + D + PL
Sbjct: 993 NINLGNTPLDREMQDQYFLIVQAYNSDLSVGTNEAPVIIIILDIND--VTPL 1042
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF + Y T+ E P+G+ V T++A D D N I+Y++ D GYF ID
Sbjct: 306 PVFLNIPYDVTIPETLPVGSTVQTIRATDPDTNNGN-IITYNLVVSDSQGYFVID 359
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP ++ Y ++ EN P+ T V+ + A D D G N+ +S+++ + + F ID++G
Sbjct: 622 NAPQWNPQSYVDSILENVPVNTFVLQVVATDND-QGTNADLSFTINNANNVP-FVIDDQG 679
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
NI L+RE P YN + +D G+P +
Sbjct: 680 ---------------------NIRTSGPLNRETVP-QYNFLVTVLDNGSPQQ 709
>gi|395537667|ref|XP_003770815.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1
[Sarcophilus harrisii]
Length = 2651
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/110 (35%), Positives = 52/110 (47%), Gaps = 24/110 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF Y +V+E+QP+GT + T+ A D D G N++I+Y + E P+
Sbjct: 734 PVFQSSHYTVSVREDQPVGTSIATISATDED-TGENARITYVL-------------EDPV 779
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
FRI P D GT IV L LD E Y L + A D G P +
Sbjct: 780 PQFRIHP---DTGT------IVTLMELDYE-DQAAYTLAITARDNGIPQK 819
Score = 42.7 bits (99), Expect = 0.052, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ +V E+ P T V+ + A D D G N ++ Y+ +GG+ D +G
Sbjct: 835 NVPHFLRDFYQGSVFEDAPPSTSVLQVSATDRD-SGPNGRLLYTFQGGE-------DGDG 886
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
F I PT T+++ LDRE + YNL AVD+G+P
Sbjct: 887 ---DFYIEPTSGVIRTQRR---------LDRENVAV-YNLRALAVDRGSP 923
Score = 39.7 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTID 58
++PVF Y+ TV+EN +G V+T++A D D P N+ + Y + G DG F ID
Sbjct: 301 HSPVFEQVEYRETVRENLEVGYEVLTIRATDGDAPS-NANMRYRLLEGADGA--FEID 355
Score = 39.3 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 19/111 (17%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F YQ +V EN+P GT VI L+A D D G +++Y + + +E
Sbjct: 194 SPQFQLPSYQVSVPENEPAGTPVIELRAQDPD-EGEAGRLTYQMEA--------LFDERS 244
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+F I P D G + + LDRE + L + AVD G+P R
Sbjct: 245 NGYFHIEP---DTGA------VTTSRPLDRETKDT-HVLKVTAVDHGSPQR 285
Score = 38.5 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAP+F +QA V EN P+G V+ ++A DAD G N+++ Y
Sbjct: 513 NAPIFVSSPFQAAVLENVPLGHSVLHIQAVDAD-SGENARLHY 554
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N PVF+ VY+ + E+ +G+ V+TL+A D D NS I+Y + G+ F + ++
Sbjct: 630 NDPVFTQPVYELRLNEDATVGSSVLTLQARDRDA---NSVITYQLTSGNTRNRFALSSQ 685
>gi|62089402|dbj|BAD93145.1| cadherin 5, type 2 preproprotein variant [Homo sapiens]
Length = 807
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ ++ A+V E+ +GT VI++ A DAD P + S + G YF IDN G
Sbjct: 170 NWPVFTHRLFNASVPESSAVGTSVISVTAVDADDPTVGDHASVMYQILKGKEYFAIDNSG 229
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
+ I TK K+ Y IVV
Sbjct: 230 RI----ITITKSLDREKQARYEIVV 250
>gi|312378848|gb|EFR25304.1| hypothetical protein AND_09493 [Anopheles darlingi]
Length = 3184
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF +YQAT+ E+ IGT V+ + A D D G+N ++ Y++ D +EG
Sbjct: 1252 NAPVFKVPLYQATIPEDALIGTSVVQIGATDLD-MGLNGRVKYALSQKDM-------DEG 1303
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+DP + N K LDRE P+ Y+L+ A DKGTP
Sbjct: 1304 SF--------VVDPISGVIRTN----KGLDRESIPV-YHLSAIASDKGTP 1340
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 19/120 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F + ATV+E +G+ VIT++A D D G N++I YS+ G + E
Sbjct: 712 HTPTFEAEQFHATVREGVSVGSTVITIRATDQD-IGKNAEIEYSITSITG------ERES 764
Query: 62 PLN--HFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
P++ FRI + I LDRE++ + Y + + A D TP E AT
Sbjct: 765 PIDSQKFRI---------DARSGTISTRSALDREVSGM-YTIAVTASDMATPQTERKSAT 814
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 41/111 (36%), Positives = 56/111 (50%), Gaps = 21/111 (18%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDNE 60
APVF + Y A+V E+ PIGT V+ + A D+D G+N++I+Y + +GLG NE
Sbjct: 1143 APVFENAPYSASVFEDAPIGTTVLVVSATDSD-VGINAQITYLLNDESVNGLG----ANE 1197
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P I+ T +V LDRE GY LT+ A D G P
Sbjct: 1198 ---------PFTINAQTGA----VVTNAKLDRETTA-GYLLTVTAKDGGNP 1234
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F +Q V E+ P+G ++ ++A DAD G NS+I+YS+
Sbjct: 934 NAPRFYTSQFQEAVLESVPVGYNIVRVQAYDAD-EGANSEITYSI--------------- 977
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
LN +P +DP T I K LDRE Y+ + AVD G PP+
Sbjct: 978 -LNRDDSMPLAVDPRTGW----IHTTKGLDRE-EQSRYSFQVVAVDGGIPPK 1023
Score = 42.0 bits (97), Expect = 0.089, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P FS Y+A + E+QP GT V T+ A D P ++++ Y + G+ G F I ++
Sbjct: 1039 NDPTFSPKYYEAMLAEDQPPGTPVTTVTATD---PDEDARLHYEITAGNTRGRFAITSQ 1094
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 24/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIG--TLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P FS+ Y V+E+Q ++ ++A DAD G N+ I +++ GG+ F+ID+
Sbjct: 827 NYPQFSERTYTVQVREDQWTNENNVIAHIQATDADQ-GNNAAIRFAIIGGNTQSQFSIDS 885
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
++ ++K LD E + Y L +RA D G+P R
Sbjct: 886 MSG--------------------DVSLVKPLDYE-SVRSYRLVIRAQDGGSPSR 918
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT-IDNEGP 62
P F+ V EN P+G++V + A D D G+N+ + YS+ GGD F+ + G
Sbjct: 1360 PTFASDKLTLYVPENSPVGSVVGEIYAHDPD-EGVNAIVHYSIIGGDDSNSFSLVTRPGS 1418
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVV 86
+ T++D + +K + +++
Sbjct: 1419 DRAQLLTMTELDYESSRKRFELII 1442
>gi|260802290|ref|XP_002596025.1| hypothetical protein BRAFLDRAFT_84111 [Branchiostoma floridae]
gi|229281279|gb|EEN52037.1| hypothetical protein BRAFLDRAFT_84111 [Branchiostoma floridae]
Length = 3422
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 20/112 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P+F Y V E++P G L++ + A D D G NS I+YS+R G+ F ID
Sbjct: 1349 NSPLFDRETYTTNVTEDKPGGGLILQVTATDED-EGSNSNITYSIRSGNSDEVFYID--- 1404
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
++ E + K LD E P Y L+++A D G PR
Sbjct: 1405 ---------------SRTGEIFLQTNKSLDYETTP-EYRLSVKAQDGGESPR 1440
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y ++ E PIG +V A DAD G N++++YS+R G+G YF +D++G
Sbjct: 1771 NPPEFNPSTYHVSILEQSPIGMVVAETSATDAD-EGTNAELTYSLR-GNGTKYFDVDDKG 1828
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I+ T +K ++ + E ++ A D GTPP
Sbjct: 1829 LVRMREIL-------TVEKLTEEGLISGMVNETNSTTIRFSVVATDAGTPP 1872
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 48/114 (42%), Gaps = 21/114 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ VY+ V E GT+V + A D D G N I+Y++ G+ F ID
Sbjct: 1144 NAPEFTKDVYEVEVNETATNGTVVAMVMATDIDS-GDNGNITYTIISGNEQNTFAIDG-- 1200
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
G+ + I + LD + Y L + A D GTP R +
Sbjct: 1201 --------------GSGE----ITLETTLDHDQGNRSYQLVVEAKDAGTPIRSS 1236
Score = 39.3 bits (90), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF +A V+E+ +G V+ + A DAD G N+++ Y + G G G F +DN
Sbjct: 2408 NAPVFDPTNIEADVREDAALGAEVVVITATDAD-KGRNAELLYFIHSG-GDGKFALDN 2463
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 22/106 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y A V E GT+V TLKA D D ++++++ + G G F + +
Sbjct: 511 NKPQFGQEQYTAQVSEAAGTGTVVATLKATDGD---RDAQLTFQIEDG-SFGQFNLSD-- 564
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ E +V+ LDRE+ YN+T++ D
Sbjct: 565 ---------------ARDGEVQVVISSELDREMTD-SYNITVKVSD 594
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 45/118 (38%), Gaps = 21/118 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y V EN TLV T+ A D D GG+G + +D G
Sbjct: 1664 NAPEFDTSHYNFQVSENMNASTLVGTVFAEDTD------------EGGNGEVSYYLDPSG 1711
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
F I K+ I+ ++LDRE + T+ A D G P AT
Sbjct: 1712 EEVPFNI---------SKETGEIITTEVLDREGDAASFTFTVFAQDNGMPTSLNSTAT 1760
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLG-YFTIDN 59
N+P F+ Y A + P+G+ VI + A D D G N I Y ++ D G YFT+D+
Sbjct: 2623 NSPTFNSSDYAAQIDLTAPVGSEVIQVFAGDLD-EGANGDIWYFLKNDDSYGSYFTLDD 2680
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 46/116 (39%), Gaps = 25/116 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N+P F+ Y A V EN IG +V + A D D G N I YS+ DG F+I
Sbjct: 727 NSPTFTADEYNAAVPENARIGVVVTQVTATDRD-SGTNGDIIYSIIFASSDGKDKFSISR 785
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+G NI V LD + Y + + A D+G R T
Sbjct: 786 DG---------------------NITVSGSLDADTVE-SYVVVVMAADQGAASRVT 819
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG 48
N PVFS Y + ++ PIG V+ L+A+DAD G N++++YS G
Sbjct: 2847 NPPVFSQSSYVKGIPDDAPIGYTVMQLQASDAD-TGSNAELTYSFVG 2892
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 45/112 (40%), Gaps = 23/112 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y V E G+ V + A D D G N +I YS+ D F+IDN
Sbjct: 1995 PTFQSPPYHFIVSEAATPGSAVGGVIATDMDL-GKNGEILYSITA-DNDNVFSIDN---- 2048
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I + LDRE A YN+T+ A D G+PPR T
Sbjct: 2049 ----------------TTGQITTVGQLDRE-ATAEYNITVEATDMGSPPRNT 2083
>gi|158284502|ref|XP_307205.4| AGAP011526-PA [Anopheles gambiae str. PEST]
gi|157020993|gb|EAA03222.4| AGAP011526-PA [Anopheles gambiae str. PEST]
Length = 1376
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 53/111 (47%), Gaps = 25/111 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS Y T+ E+ +GTLV + A DAD G+N KI Y+ +
Sbjct: 534 NAPEFSMNPYSVTLPEDAEVGTLVTKIHATDAD-IGINRKIKYAFL------------DS 580
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVL-KLLDREIAPLGYNLTLRAVDKGTP 111
+HFRI P E IV L K LDRE L YNL++ A D G P
Sbjct: 581 YRDHFRIAP----------ESGIVTLAKPLDREQKAL-YNLSVSATDLGHP 620
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 22/99 (22%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
Y TV E P GT ++ +KA D D G +++YS+ D YF+ID
Sbjct: 14 YNITVSERAPFGTAILKVKATDKD-FGEYGRLAYSIISDDMQEYFSID------------ 60
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
K++ IV K LDRE + Y++ + AVD G
Sbjct: 61 --------KEKGEIVTKKKLDRE-ERMQYDIPVMAVDAG 90
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y A+V E IG+ ++ + A D G+N++I+YS+ GG+ F I N
Sbjct: 638 NPPEFTSKHYFASVPEINAIGSEILKVLATSKDT-GINAEITYSIIGGNEHRKFGIHNRT 696
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ + + LD E A Y LT++AVD GTPP
Sbjct: 697 GV--------------------LSLADTLDYERAK-DYFLTIQAVDGGTPP 726
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF + Y+A+V E+ GT+V+ + D D + + + Y + GD L F I N G +
Sbjct: 331 PVFREGQYKASVSEDALPGTVVLQIATTDKDVE-LRTAVEYYIIAGDSLSQFQIKNSGEV 389
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y A ++E+ G ++ ++A D D N ++SY++ GD + F I+
Sbjct: 743 NHPQFTQNSYSARIREDAQRGDRILQVRANDLDAE-ENGRVSYTIERGDRMEQFAIEE-- 799
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
D G + V LDRE + Y L ++A D G P Y
Sbjct: 800 ------------DTGY------VAVAGTLDRE-SISNYVLEVQARDHGVPTLTAY 835
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 44/111 (39%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y A V+E++ IG ++ DAD + ++ R G+ G F I+ +G
Sbjct: 848 NPPVFTQQNYTAVVQEDKQIGHTLLKFDVTDADAAPNAAPYTFDFRSGNEGGAFRIEQDG 907
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L +KI Y L +R D GTPP
Sbjct: 908 ILRTATRFNSKIRD----------------------SYQLQVRVFDNGTPP 936
>gi|300798360|ref|NP_001179833.1| cadherin-7 precursor [Bos taurus]
gi|296473880|tpg|DAA15995.1| TPA: cadherin 7, type 2 [Bos taurus]
Length = 785
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G N+++ Y + GDGLG F I
Sbjct: 258 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-IGANAEMDYKIVDGDGLGIFKI---- 312
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+D T +E I + K LD E A Y L + A ++ PR
Sbjct: 313 ----------AVDKDT--QEGIITIQKDLDFE-AKTSYTLRIEAANRDADPR 351
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
>gi|395511789|ref|XP_003760134.1| PREDICTED: cadherin-7 [Sarcophilus harrisii]
Length = 785
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G N+++ Y + GDGLG F I
Sbjct: 258 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-VGPNAEMEYKIVDGDGLGVFKI---- 312
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+D T +E I + K LD E A Y L + A +K PR
Sbjct: 313 ----------SVDKDT--QEGIITIQKELDFE-AKTSYTLRIEASNKHVDPR 351
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNEGP 62
PVFS +Y V E +G ++ T+ A DP NS + YS+ R D YF ID
Sbjct: 375 PVFSSRLYSMEVSEATQVGNIIGTVTA--HDPDSSNSPVRYSIDRNTDLERYFNIDANSG 432
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I K LDRE + +N+T+ A++ P +
Sbjct: 433 V--------------------ITTAKSLDRETNAV-HNITVLAMESQNPSQ 462
>gi|195325634|gb|ACF95725.1| cadherin-7 [Mustela putorius furo]
Length = 608
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G N+++ Y + GDGLG F I
Sbjct: 210 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-IGANAEMEYKIVDGDGLGIFKI---- 264
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+D T +E I + K LD E A Y L A +K PR
Sbjct: 265 ----------SVDKDT--QEGIITIQKDLDFE-AKTSYTLRTEAANKDADPR 303
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ A DAD P G ++++ YS+ G YF+++
Sbjct: 101 NEPKFLDGPYTAGVPEMSPVGTSVVQATATDADDPTYGNSARVVYSILQGQ--PYFSVE 157
Score = 35.0 bits (79), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNEGP 62
PVFS +Y V E +G ++ T+ A DP NS + YS+ R D YF ID
Sbjct: 327 PVFSSPLYPMEVSEATQVGNIIGTVAA--HDPDSSNSPVRYSIDRNTDLERYFNIDANSG 384
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I K LDRE + +N+T+ A++ P +
Sbjct: 385 V--------------------ITTAKSLDRETNAV-HNITVLAMESQNPSQ 414
>gi|47229646|emb|CAG06842.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2982
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
N P F Y +V E+ P+ T V+ + A D D G+N ++ Y+ +GG DG G F I++
Sbjct: 789 NGPRFLRDHYVGSVMEDVPVFTSVVQVSATDRD-SGLNGRVFYTFQGGEDGDGDFIIEST 847
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ + L+ LDRE P+ YNL AVDKG P +T
Sbjct: 848 SGI--------------------VRTLRRLDRENVPV-YNLQAFAVDKGVPALKT 881
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F +QATV EN P+G +I ++A DAD G NS++ Y + F I+N
Sbjct: 479 NAPIFVSTPFQATVLENVPLGYSIIHIQAVDAD-SGDNSRLEYRLTSTTPNFPFAINNST 537
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
IVV LDRE YN + A D+G P
Sbjct: 538 GW--------------------IVVAAELDRESVDF-YNFGVEARDQGYP 566
Score = 38.9 bits (89), Expect = 0.76, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS+ Y V E+ T ++ + A D D G N+ + +S+ G+ G F ID +
Sbjct: 373 NAPQFSEKRYVVQVPEDMAPNTEILQVTATDED-RGSNAVVHFSIMSGNTRGQFYIDAQ- 430
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+D ++ LD E A Y L +RA D G PP
Sbjct: 431 --------TGKMD-----------LVSHLDYE-ANKEYTLRIRAQDGGRPP 461
Score = 38.5 bits (88), Expect = 0.78, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLG-YFTIDN 59
PVF Y+ ++EN IG V+T++A D D P +N I Y + G+G F ID+
Sbjct: 267 PVFEQQDYKENIRENLEIGYEVLTVRATDGDAP-VNGNILYRIINGNGSNDVFEIDS 322
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF Y + E++P+GT V+ + A D D G N++I+Y + D + F ID
Sbjct: 688 PVFQSSHYTVNINEDRPMGTTVVLISATDED-TGENARITYFM--DDSIPQFDID 739
Score = 36.2 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F+ Y + E+ +GT V+T+ A D D +NS ++Y + G+ F+I ++
Sbjct: 584 NNPEFTQKAYYMRLNEDAAVGTSVLTVSAVDQD---INSVVTYQISSGNTRNRFSITSQ 639
>gi|432896618|ref|XP_004076349.1| PREDICTED: protocadherin-16-like [Oryzias latipes]
Length = 3296
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 25/117 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N PVFS +V E+QP+G +++ + A DAD G N ++SY ++ G+ G F++ N
Sbjct: 1540 NPPVFSS-PSAISVMEDQPVGFVILHVMAHDAD-EGENGRVSYRIQSGNNAGRFSLSPNT 1597
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
G L+ +LK LDRE + +NLT+ A D G P T +
Sbjct: 1598 GSLS---------------------ILKALDREEQEV-FNLTIVAEDHGIPQLSTSQ 1632
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 9/87 (10%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F+ +YQ ++ E+ P G+ VIT+ A D D G N +++Y V G++ + G
Sbjct: 2365 NAPLFTHDLYQISLPEHTPPGSAVITVTATDRD-SGENGRVNYRVMSSTQEGFYIDPSNG 2423
Query: 62 PL--NHFRIVPTKIDPGTKKKEYNIVV 86
L NH + DP ++ NIV+
Sbjct: 2424 TLFINH----RAEFDP--ERPSVNIVI 2444
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTID 58
NAPVFS Y +VKEN P GT + + A D D G I+Y++ GG FTI+
Sbjct: 569 NAPVFSSNFYNVSVKENTPAGTCFLEVSATDED-RGSFGTITYALTLKSGGTVQTPFTIN 627
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
K+ + LDR+ Y+LT+ A D G
Sbjct: 628 --------------------KQTGQLCTASALDRDEGLEKYDLTVTATDGG 658
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 46/110 (41%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ Y V ENQP L +KA D D G ++ Y + GD G F +
Sbjct: 1746 NAPVFAKMWYGLEVPENQPAVELCF-VKATDPD-SGPGGELEYKIAAGDPDGDFQL---- 1799
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
H R G LDRE P Y L + AVD+G+P
Sbjct: 1800 ---HSRTGALSTSHG-------------LDREKKP-KYTLEVVAVDRGSP 1832
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 10/117 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF Y+A V E+ G+ ++ +A D D N +++ G+ F I++
Sbjct: 2470 NAPVFHQSEYRAMVSEDTFPGSTLLIFEAFDNDLSRENCGFDFAIANGNEGNVFQIESSV 2529
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
R T GT +++ + LD E L YNLT+ D+G P R + A
Sbjct: 2530 RFLEGRGFQTV---GT------LLLAEGLDFETKSL-YNLTVVVSDRGVPQRSSSVA 2576
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++PVF Y TV E+ GT V ++AA G++ I YS+ GD GYFT+D+
Sbjct: 781 SSPVFEQAQYFFTVSEDVLRGTAVGVVRAATK--TGVSKGIYYSISSGDPDGYFTVDSTS 838
Query: 62 -------PLNH 65
PL+H
Sbjct: 839 GTIRTALPLDH 849
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N PVFS Y + E GT +I L A D D N+++ Y++ GD + F+ID
Sbjct: 2587 NPPVFSRPEYTVALSEGAVSGTEIIRLTATDPDST-PNAEVQYTISSGDEMNLFSIDQ 2643
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTID 58
+APVF+ Y A + E+ P G+ ++ + AAD D G N + Y + R D YF ID
Sbjct: 249 HAPVFNQSRYHAIISESLPQGSSILQVFAADED-EGDNGLVLYEINRRQSDPERYFVID 306
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y A +KE Q +I + A D D G N +++YS++ G F
Sbjct: 2160 NLPRFQLQNYVAFMKEAQGYEMPIIQVVAEDVDQ-GQNGQVTYSIQSSSMSGLF------ 2212
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
KIDP T +I ++DREI L + A D+G+P
Sbjct: 2213 ----------KIDPVTG----SITTTAIMDREIF-TQTKLVVTATDRGSP 2247
>gi|432878493|ref|XP_004073336.1| PREDICTED: uncharacterized protein LOC101171342 [Oryzias latipes]
Length = 1626
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 16/90 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG---DGLGYFTID 58
NAP FS Y A + ENQP+GT VI + A D+D G N+KI Y + D + T++
Sbjct: 457 NAPTFSQSEYNANILENQPVGTFVINISAQDSD-EGSNAKIMYHILKDMNLDASSFLTVN 515
Query: 59 NE-GPLN-----------HFRIVPTKIDPG 76
++ G L HF+I T +D G
Sbjct: 516 SDTGELFTSRHFDYEQSVHFQIRVTALDRG 545
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
N PVFS VY+A+VKEN IGT++ITL A D D G+ +I+YS
Sbjct: 247 NVPVFSQRVYKASVKENSAIGTVIITLNATDLD-DGVYGEITYS 289
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 21/106 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ +Y+A+V EN G +++ + A DAD G N ++Y YFT EG
Sbjct: 1058 NAPVFTQPLYKASVSENILRGAIILRVSAVDAD-QGYNGNVTY---------YFTHLEEG 1107
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
P +I+ T + I + LD E++P Y + ++A D
Sbjct: 1108 SF------PFEINSFTGE----IKLTGDLDFEVSP-SYEINIQAKD 1142
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 22/117 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV + Y + E+ P GT+V + D D G +G ++
Sbjct: 1162 NSPVITMASYSGKISEDSPPGTVVALISVQDKDS------------GKNGQVRLALEENL 1209
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
P N T + Y +V ++LDRE + Y++TL A D+G P + K+
Sbjct: 1210 PFNI---------KSTLRNYYTLVTERILDRE-SDSKYSITLTATDEGFQPLSSKKS 1256
>gi|194757998|ref|XP_001961249.1| GF13772 [Drosophila ananassae]
gi|190622547|gb|EDV38071.1| GF13772 [Drosophila ananassae]
Length = 3584
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 43/112 (38%), Positives = 57/112 (50%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDNE 60
NAP F +YQA++ E+ +GT VI + A+D D G+N +I Y + D G F ID
Sbjct: 1002 NAPAFKSPLYQASILEDALVGTSVIQVAASDPD-VGLNGRIKYLLGDRDVEDGSFVID-- 1058
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PT GT + K LDRE + Y+LT AVDKG+PP
Sbjct: 1059 ---------PTS---GTIRTN------KGLDRESVAV-YHLTAIAVDKGSPP 1091
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 17/109 (15%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP+F + Y A+V E+ P+GT V+ + A D+D G+N++I+YS L +I+ G
Sbjct: 893 APIFENAPYSASVFEDAPVGTTVLVVSATDSD-VGVNAQITYS------LNEESINGLGS 945
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ F I + IV LDRE GY LT+ A D G P
Sbjct: 946 PDPFSI---------NSQTGAIVTSAPLDRETTS-GYLLTVTAKDGGNP 984
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F +Q +V EN P+G +I ++A D+D G N++I+YS+ D DN
Sbjct: 684 NAPRFYTSQFQESVLENVPVGYNIIRVQAYDSD-EGANAEITYSISERD-------DN-- 733
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P +DP T + +K LDRE + + A D G PP+
Sbjct: 734 -------FPLAVDPRTGW----VQTIKPLDRE-EQARFAFQVVAKDGGVPPK 773
Score = 42.0 bits (97), Expect = 0.080, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 13/118 (11%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F ++A+++E +G+ VITL+A D D G N++I Y + G D E
Sbjct: 459 HSPSFEAEQFEASIREGATVGSTVITLRATDQD-IGKNAEIEYGIEAVTDGGGLAQDQEL 517
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
P+ FRI + I LDRE + Y+L + A D + E AT
Sbjct: 518 PI--FRI---------DSRSGVISTRSSLDRETSD-SYHLLVTAADMASAQSERRTAT 563
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F+ Y+A V E+QP GT V T+ A D P +S++ Y + G+ G F I ++
Sbjct: 789 NDPAFNPKYYEANVGEDQPPGTPVTTVTATD---PDEDSRLHYEITTGNTRGRFAITSQ 844
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 25/115 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGT---LVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P FS+ Y V E+Q G+ V ++A DAD G N+ I Y++ GG+ F+ID
Sbjct: 576 NYPQFSERTYTVQVPEDQWGGSEDNTVAHIRATDADQ-GNNAAIRYAIIGGNTQSQFSID 634
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ ++ ++K LD E + Y L +RA D G+P R
Sbjct: 635 SMSG--------------------DVSLVKPLDYE-SVRSYRLVIRAQDGGSPSR 668
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT-IDNEGP 62
P F V EN P+G++V + A D D G+N+ + YS+ GG+ F+ + G
Sbjct: 1110 PTFPSDKITLYVPENSPVGSVVGEIHAHDPD-EGVNAVVHYSIIGGEDSNAFSLVTRPGS 1168
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVV 86
+ T++D + +K + +VV
Sbjct: 1169 ERAQLLTMTELDYESSRKRFELVV 1192
>gi|391333242|ref|XP_003741028.1| PREDICTED: protocadherin-like wing polarity protein stan-like
[Metaseiulus occidentalis]
Length = 2673
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
NAP F+ Y + V E+ +GT ++ + A D D G+N+++ Y+ GG DG G F+ID
Sbjct: 778 NAPKFAMASYTSDVSEDALLGTSIVQVSALDED-QGLNAQVRYTFTGGDDGQGAFSIDPT 836
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
L + K LDRE A Y+L AVD+G+P T
Sbjct: 837 SGL--------------------VRTAKQLDRE-AVATYHLKAVAVDRGSPQMST 870
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 24/121 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR-GGDGLGYFTIDNE 60
+AP F Y+A+++E+ P+G+ ++T +A D+D G N+ ISYS++ G D F ID
Sbjct: 248 HAPHFEQGYYEASIRESSPVGSTILTARATDSD-AGQNAVISYSLQVGFDATDIFAIDAT 306
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
++ TK LDRE P Y++ +RA D G P ++ +T
Sbjct: 307 SG-----VIYTKAS---------------LDREKIP-EYSIIIRAED-GAPVQKRLTSTA 344
Query: 121 R 121
+
Sbjct: 345 Q 345
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 51/109 (46%), Gaps = 24/109 (22%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y A+V E+ P+GT V+ ++A D D G N++++Y++ E +
Sbjct: 677 PTFVKTPYTASVFEDIPVGTTVLVIEAIDND-VGDNARVTYTL-------------EDAV 722
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F+I PT IV LDRE GY L + A D G PP
Sbjct: 723 NAFKIEPTT---------GAIVTSLPLDRESVS-GYTLVITAQDDGRPP 761
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N P F Y AT+ E P GT VIT+ A+D P +S+I YS+ G+ F I
Sbjct: 572 NDPTFEQKSYYATLSEKDPPGTPVITVHASD---PDKDSRIQYSIPSGNHRDRFGI 624
>gi|432104084|gb|ELK30914.1| Protocadherin Fat 4 [Myotis davidii]
Length = 1859
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P+FS +Y + E P GT V + A D+D S+ SY + G+ G F+
Sbjct: 281 DPPIFSLNIYSVQISEGVPTGTHVTFVSAFDSDSVPSWSRFSYFIGSGNENGAFS----- 335
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I V LDRE P+ YNLT+ A+D GTP
Sbjct: 336 -----------INPQTGQ----ITVTAELDRETLPI-YNLTVLAIDSGTP 369
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 31/63 (49%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVF Y TV EN P GT VI L A DAD G N+ I+Y+V+ D F ID N
Sbjct: 71 NSPVFLPEEYFPTVLENAPSGTTVIHLNATDAD-SGTNAVIAYTVQSSDS-DLFVIDPNT 128
Query: 61 GPL 63
G L
Sbjct: 129 GVL 131
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD-PPGMNSKISYSVRGGDGLGYFTIDNE 60
N P+ + + + V EN+ GTLV+TL++ D D PP Y + G YF+++
Sbjct: 387 NGPMLT--ISEGEVMENKRPGTLVMTLQSTDPDLPPNQGPFTYYLLSTGPATNYFSLNTA 444
Query: 61 GPLNHFR 67
G L+ R
Sbjct: 445 GVLSTTR 451
>gi|449482631|ref|XP_004176432.1| PREDICTED: protocadherin-16 [Taeniopygia guttata]
Length = 2905
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 11/112 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P+F + Y A+V E+ GT V+ L+A DAD N+ Y++ G+G F +++
Sbjct: 2260 HSPLFQEPCYNASVPEDLRPGTTVLMLEAGDADLSRENAGFDYTIVSGNGGNAFQVES-- 2317
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
R+ G + + +V+++ LD E P+ YNLT+ A D+G P R
Sbjct: 2318 -----RVARAG---GQLRTQGALVLVESLDFEAIPV-YNLTVAASDRGLPQR 2360
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVF Y +V E+ P G V +++A + PPG I YS+ GD GYF+ID+
Sbjct: 606 VSPPVFEQAQYFFSVPEDMPQGASVGSVQAQN--PPGHADDIFYSISSGDPHGYFSIDSA 663
Query: 61 G-------PLNH 65
PL+H
Sbjct: 664 SGQLRTSLPLDH 675
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP F+ Y V E+ P+G LV+ L A D D G N ++SY + G + LG F ++
Sbjct: 1660 NAPSFAQASYTVEVPEDLPVGALVLQLVAEDPD-EGTNGQVSYYL-GNESLGMFQVE 1714
Score = 40.0 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 43/139 (30%), Positives = 57/139 (41%), Gaps = 31/139 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT----- 56
N PVFS Y+A V E GT ++ + A DAD G ++ Y++ GD G F
Sbjct: 2376 NPPVFSRAEYRAVVSEAALPGTELLRVAAHDAD-SGPRGRVHYTISSGDQHGLFQLHEST 2434
Query: 57 --------IDNEG-------------PLNHFRIVPTKI---DPGTKKKEYNIVVLKLLDR 92
+D E P HF +VP I D K + + +L R
Sbjct: 2435 GALSLVRPLDREAQALHTLVVQATDTPGGHFALVPVAIEVKDINDNKPYFPVEMLSASIR 2494
Query: 93 EIAPLGYNL-TLRAVDKGT 110
E P G + TLRAVD T
Sbjct: 2495 ENLPPGTLVTTLRAVDADT 2513
Score = 38.9 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 42/117 (35%), Positives = 53/117 (45%), Gaps = 26/117 (22%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
APVF Y+A V EN P G+ V+ + A D D G N ++SY GG G F+I +
Sbjct: 1455 APVFEKPEYEAHVMENLPAGSPVLQVLATDRD-LGANGQVSY---GGLSGGPFSIHPQTG 1510
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
L IV + LDRE + LT+ A D G PP T KAT
Sbjct: 1511 L--------------------IVTTRALDRE-EQEQHVLTVYARDAGLPPSLT-KAT 1545
Score = 35.4 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 18/108 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ++KEN P+GT + + A D+D S +SYS+
Sbjct: 395 NEPVFKSNFYNVSLKENTPVGTCFLQVTATDSDSGAFGS-LSYSIG-------------- 439
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
I+PT+ K + ++ LDR+ Y+ T+ AVD G
Sbjct: 440 -SGIGSIIPTQFS--IDKHSGQLCTVQPLDRDEGTSAYDFTIIAVDGG 484
Score = 35.4 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
N P F+ YQ + E+ P GT+++T+ A D D G N I++
Sbjct: 2156 NVPTFTQVFYQVLLPEHTPAGTVILTVSATDPD-SGSNGDITF 2197
Score = 35.0 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVF +V E+QP G + + + A D+D G N ++SYS+R G+ G F ++
Sbjct: 1320 NVPVFLSPA-TVSVMEDQPTGFVALHVVAQDSDL-GENGRVSYSLRAGNADGRFHLN 1374
>gi|344268922|ref|XP_003406305.1| PREDICTED: cadherin-7 [Loxodonta africana]
Length = 785
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G N+++ Y + GDGLG F I
Sbjct: 258 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-IGANAEMEYKIVDGDGLGIFKI---- 312
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+D T +E I + K LD E Y L + A +K PR
Sbjct: 313 ----------SVDKDT--QEGIITIQKELDFE-TKTSYTLRIEAANKDADPR 351
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
>gi|395542518|ref|XP_003773176.1| PREDICTED: protocadherin-23 [Sarcophilus harrisii]
Length = 2705
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 13/102 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N P+F+ Y A V+E+ P+G+ ++ + A D D G NS+I+Y++ G+ +F ID E
Sbjct: 1994 NTPIFNSPEYYAHVRESLPVGSQIVVVSAKDHD-SGANSEITYTIISGNEREHFQIDGET 2052
Query: 61 ------GPLNH-----FRIVPTKIDPGTKKKEYNIVVLKLLD 91
PL++ F + D GT + +V + +LD
Sbjct: 2053 GAIDLIKPLDYEDTLMFTLTVQASDRGTNHFAFTVVFISVLD 2094
Score = 42.0 bits (97), Expect = 0.076, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++P FS YQ VKE+ +G++++ L A D D G+N ++ Y + D LG FTID
Sbjct: 1259 HSPTFSASHYQTWVKEDLAVGSVILELTAVDED-GGLNGQVEYFLT-NDALGSFTID 1313
Score = 42.0 bits (97), Expect = 0.084, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 46/110 (41%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQ +V E Q T +I + A D D G+N +I YS+ G+ F ID
Sbjct: 1568 NVPVFHPNTYQTSVSEGQIFNTQIIQVFAVDLD-SGLNGQIEYSILSGNQDEAFQIDAVS 1626
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ I +LD E+ Y+L + A DKG P
Sbjct: 1627 GV--------------------IATNMVLDYELTN-SYSLVVHAADKGIP 1655
Score = 39.7 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N P+F YQ T+ E P+G+ ++T+ A D D G+N +ISY +
Sbjct: 1774 NPPLFPQDFYQVTLPEMTPVGSSILTVSATDQD-IGINGRISYKI 1817
Score = 37.4 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 48/108 (44%), Gaps = 20/108 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F D +++EN +GTLV T A D D +NSK+ YF N
Sbjct: 836 HSPFFQDDFIVISIEENVSVGTLVYTFNAKDGDGSFLNSKVQ----------YFIETNSP 885
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
N F I P+ GT +V LDRE A + LT+ A D+
Sbjct: 886 GENPFLIHPSY---GT------LVTASPLDRE-AIQSFVLTVTASDQA 923
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 46/110 (41%), Gaps = 13/110 (11%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ Y TV E+ IGT ++T A D D N+ + YS+ G+
Sbjct: 1880 PQFTMEYYNITVSEDAAIGTTLLTFSAIDLDWTHENTNVKYSIISGN-----------LQ 1928
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKL-LDREIAPLGYNLTLRAVDKGTPP 112
N F + I G+ +VL LDRE + L + A D G PP
Sbjct: 1929 NTFYVEIHVISSGSPYNRIGHLVLNHPLDRETMA-SHELIIMASDHGHPP 1977
>gi|270006423|gb|EFA02871.1| cadherin-like protein [Tribolium castaneum]
Length = 3284
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 51/110 (46%), Gaps = 21/110 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F +Y+ + E P+G+ V +KA D D N++ SYS+ GG+ F
Sbjct: 1725 PEFLQTLYEVEISEGAPVGSKVTAVKAVDKDVRPQNNQFSYSIIGGNIEQAF-------- 1776
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
KIDP + + E + LDRE P Y+L + +D G PP+
Sbjct: 1777 --------KIDPQSGQIE----TARFLDRETTP-EYSLVVGGIDTGLPPQ 1813
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 57/113 (50%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQ--PIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P F D Y A V EN P G VIT++A DAD P +NS + Y ++
Sbjct: 566 NPPTFLDSPYLAYVMENTIPPNGGYVITVQAYDADTPPLNSLVRYFIK------------ 613
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
EG + F KI+ T + I +L+ LDRE A Y L+L A+D G+PP
Sbjct: 614 EGKPDTF-----KINASTGE----ISLLRALDRE-AQAEYTLSLGAMDTGSPP 656
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF+ YQ V EN+P+G+ ++T+ A+D D G N I Y + GG+ F +D
Sbjct: 1410 PVFTALSYQVIVPENEPLGSTILTVNASD-DDQGPNGMIRYKISGGNERKEFAVD 1463
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 49/118 (41%), Gaps = 23/118 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F Y + EN I T ++T+ A D D G N KI + + GD G F + G
Sbjct: 244 NTPLFDPMSYTNEIFENVSIATPIVTVSATDLD-SGDNGKIVFRITAGDENGDFEMTPNG 302
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
++ K LDRE L YNL + A D+ PP + +T
Sbjct: 303 ---------------------TVITKKELDRERQGL-YNLVVTATDQAKPPDQRLSST 338
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 50/113 (44%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F Y AT+ EN P+ T V+T A D D G+N+KI YS+ GD + F ID +
Sbjct: 673 HTPEFKRQSYHATINENSPLSTWVVTPTATDKD-IGLNAKIRYSLL-GDKVDRFKIDQDA 730
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD-KGTPPR 113
+ I +LDRE + Y T+ A D T PR
Sbjct: 731 GI--------------------ITTSAILDREETEI-YYFTVMAQDCSATEPR 762
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N+PVF Y A++ EN IG V+ + A D D G+N ++ YS+ GD F+I
Sbjct: 456 NSPVFDPKQYSASIAENASIGASVLQVSATDVD-DGLNGRVRYSINSGDTNRDFSI 510
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N+P F+ +Y+A + EN P + V +KA D D P N+ I YS+ G F ID +
Sbjct: 1513 NSPTFNQSIYEAYISENLPPNSFVFQVKATDIDSP-KNAIIQYSISDGPDKDMFAIDQK 1570
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ +Y A++ E + LV+ + A D D G N +++Y + D G F ID+E
Sbjct: 988 NSPVFNSNLYNASILEEESPPQLVVKVSAEDLD-SGENGQVTYKLT-DDFDGTFEIDSES 1045
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I LDRE P Y LT+ A+D+G P
Sbjct: 1046 G--------------------EIYTNARLDREETP-AYELTVEALDQGVP 1074
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 26/115 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y + V ++ G L++ + A D G+N++I+Y + GG+G F ID
Sbjct: 1303 NAPKFDKPEYLSPVPDDAQEGQLLLKVTAKDKLDFGVNAEINYVIVGGNGSENFAID--- 1359
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG--YNLTLRAVDKGTPPRE 114
+YN + L + + +G Y L +RA+DKG PP+
Sbjct: 1360 -------------------KYNGWI--TLTKPVTEIGQEYLLRVRAIDKGVPPQH 1393
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 48/106 (45%), Gaps = 23/106 (21%)
Query: 12 QATVKENQPIGTLVITLKAADADPPGMNSKISYSVR-GGDGLGYFTIDNEGPLNHFRIVP 70
+ +V EN I T+V+ +KA D D G N I YS+ G F++ GP++ V
Sbjct: 360 ETSVAENIAINTVVMAVKAIDKDE-GRNGYIEYSLSPDSASSGTFSL---GPVDGLLRVS 415
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ID TK Y L++ A D+G PPR T+
Sbjct: 416 GRIDRETKSN------------------YTLSITARDRGDPPRATH 443
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 29/117 (24%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P FS Y+ + + G V +A+D D G+NSKISY++ G +
Sbjct: 778 NSPSFSSTKYEVNISDKTKAGEFVFGARASD-DDIGINSKISYALTGEHAPNF------- 829
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG---YNLTLRAVDKGTPPRET 115
I+P T V+K +++A LG +NL + A D G PR+T
Sbjct: 830 ----------TINPETG-------VIKAA-QDLAKLGTKVFNLEIEAADGGKKPRKT 868
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 46/115 (40%), Gaps = 18/115 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y E Q V + A D D G NS ISYS+ +
Sbjct: 1192 NAPEFEHSFYSFNFPELQRDVVFVGQVAATDRDKQGPNSVISYSL-------------QQ 1238
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVDKGTPPRET 115
P + F + P D +K+ + K E +P Y+LT+ A D G PP +
Sbjct: 1239 PSDLFTVDPASGDIFSKRS----LRFKYTQMEASPENMYSLTILATDNGKPPMSS 1289
>gi|47216287|emb|CAF96583.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3280
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 52/111 (46%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y+ V E Q T V+ + A+DAD G+N +I YS+ GD F +D+
Sbjct: 2172 NAPRFERSSYRTAVWEGQAHNTYVMQMFASDAD-SGINGQIEYSIVSGDPNEAFILDSVR 2230
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I+ T I LDREI P Y L L+A D+G PP
Sbjct: 2231 G-----ILATSIP---------------LDREITP-SYKLVLQAADQGDPP 2260
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y A V E+ P GT ++ + A D D G NS + + + G+ G++ +D E
Sbjct: 2598 NAPVFSSTEYHAQVSESSPRGTRLVQVSARDPD-LGANSLVRFDIISGNSKGHYKLDPES 2656
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
L + V + LD E P Y LT+RA D G
Sbjct: 2657 GL--------------------LAVNQSLDYEQDP-KYILTVRASDGG 2683
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 11/111 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F VY T+ E+ P ++TL A D D N+ + Y++ G+ F ++
Sbjct: 2482 HVPTFHQEVYSLTIPEDTPTDATLLTLSAEDQDWSPANTHLDYAITQGNEERRFCLE--- 2538
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
R+VP + + +V+ LDRE Y LT+ D+G PP
Sbjct: 2539 ----VRLVPIE---NQWRNVGKLVLCNALDRETTD-SYVLTVSVSDRGDPP 2581
Score = 41.6 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAP FS YQA+V E P G V+ + A D D G N +++YS+ G F++D+
Sbjct: 1862 NAPSFSRKSYQASVSEGLPPGAEVLRVSAFDPD-EGPNGRVTYSLTEDSSQGAFSVDS 1918
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 17/115 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF +Y A+V E+ +G+ + + A DAD P + + YS+ G F ++
Sbjct: 548 NEPVFQRQLYGASVPEHSAVGSCFLQVVATDADSPAFGT-LLYSLSDG-----FDGQDQH 601
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
PL H + P + + + V + +DR+ ++L +RA D G +TY
Sbjct: 602 PLFH-------VHPQSGE----LCVSQDIDRDSGQTVHDLLIRAEDPGGLSAQTY 645
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 23/111 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F ++ ++ EN P G + T +A+D D G N I YS+ G D G FT+++
Sbjct: 1758 NPPAFMQSSFRISLPENLPPGA-IHTAQASDPDL-GENGTILYSIVGEDCAGCFTVNSRS 1815
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ + K+LDRE Y LT++A D G P
Sbjct: 1816 GV--------------------VSTTKVLDRE-EKQNYTLTIQARDYGPTP 1845
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 46/109 (42%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS VY A+V EN+ G V + A D D N+ + YS+ G G F+I+ + L
Sbjct: 1655 PVFSQSVYNASVAENKDPGEPVARVSATDGDSE-ENAVVWYSLLPGPGYELFSINPDTGL 1713
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I LDRE G+ L ++A D G P
Sbjct: 1714 --------------------ITTASYLDRE-QQHGFTLRVQARDSGPRP 1741
Score = 35.8 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Query: 5 VFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT-------I 57
VF Y TV E+ GT V T++A G ++ +SY + GD G+F+ I
Sbjct: 764 VFHQSRYTFTVAEDATPGTTVGTVEAVTPAAEGFSASVSYRISSGDPQGFFSIHPRSGVI 823
Query: 58 DNEGPLNH 65
+ PL+H
Sbjct: 824 SSTKPLDH 831
Score = 35.4 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS+ YQ + E TLV+++ A D D G N +I+Y + G++ + G
Sbjct: 2377 NAPVFSEDSYQVDLSELATADTLVLSVSATDRD-SGPNGEITYRLLSSPLQGFYIQADSG 2435
Query: 62 PL 63
+
Sbjct: 2436 AI 2437
>gi|410927542|ref|XP_003977200.1| PREDICTED: protocadherin gamma-A2-like [Takifugu rubripes]
Length = 540
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAPVF+ Y++TV EN P GT+V T+ A+DAD G N KI+YS+
Sbjct: 228 NAPVFTQSTYKSTVTENAPKGTVVATVTASDAD-DGANRKITYSI 271
>gi|405960423|gb|EKC26348.1| Cadherin-23 [Crassostrea gigas]
Length = 1872
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 23/113 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+A+V+E+Q +GT +I + +D D G N ++YS+RG G+ F
Sbjct: 555 NTPEFLVQEYRASVREDQVVGTTIIKITGSDKD-SGNNGLLTYSLRGT-GIEKF------ 606
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+DP T + + + LD E P Y L RA D GTP RE
Sbjct: 607 ----------NVDPSTGL----VTLAQTLDYENTP-AYQLLFRAQDNGTPSRE 644
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 45/110 (40%), Gaps = 22/110 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F +Y AT+ E P G V ++ A D D G N I+Y + G GL +FTID G +
Sbjct: 755 PQFVQSLYTATISEGVPTGYFVKSVSATDQD-FGSNGNITYYIWSG-GLDHFTIDQMGQV 812
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+D YN+ + D+G+PPR
Sbjct: 813 TVSSGAALDVDD--------------------VRSYNILIHGRDQGSPPR 842
>gi|345328656|ref|XP_003431291.1| PREDICTED: protocadherin gamma-A12-like [Ornithorhynchus anatinus]
Length = 812
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
NAPVF+ VYQ V+E+ P+GT V+T+ A DAD G+N+++ YS
Sbjct: 238 NAPVFTQSVYQVKVREDAPVGTRVVTINATDAD-EGLNAEVIYS 280
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP + ++ E P GT++ L D D G N +S S+
Sbjct: 343 NAPEITVTSLINSIPEGSPTGTVIALLNVHDRDS-GDNGLVSCSI--------------- 386
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P N +P K++ T Y++V + LDRE+ YN+T++A D+G+PP
Sbjct: 387 PDN----LPFKLEK-TYGNYYSLVTDRSLDRELVS-EYNVTVKATDRGSPP 431
Score = 35.4 bits (80), Expect = 8.6, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLG-----YFT 56
N P F Y V EN P G V + A D D N++I+YS+ G G G Y +
Sbjct: 448 NPPAFEQAAYSVYVPENNPRGASVFRVIAWDPD-SDENAQITYSISEGPGQGPPLSSYVS 506
Query: 57 IDNE 60
I++E
Sbjct: 507 INSE 510
>gi|195437460|ref|XP_002066658.1| GK24450 [Drosophila willistoni]
gi|194162743|gb|EDW77644.1| GK24450 [Drosophila willistoni]
Length = 5118
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQ--PIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P F D Y A V EN P G V+T+KA DAD P +NS++ Y ++
Sbjct: 2369 NRPTFLDSPYLARVMENTVPPNGGYVLTVKAYDADTPPLNSQVRYFLK------------ 2416
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
EG + FRI I +LK LDRE + Y LTL A+D G PP
Sbjct: 2417 EGNSDLFRI---------NASTGEISLLKPLDRE-SQSEYILTLVAMDTGLPP 2459
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 48/110 (43%), Gaps = 21/110 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y A++ E PIG+ V T+KA D D N++ SYS+ G+ F ID
Sbjct: 3524 PEFIKRFYTASISEATPIGSKVTTVKAIDKDVRLQNNQFSYSIINGNLNQSFRID----- 3578
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I LLDRE + YNL + A+D G PP+
Sbjct: 3579 ---------------AHSGEIKTAALLDRE-SIAHYNLIIGAIDTGLPPQ 3612
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 51/115 (44%), Gaps = 24/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y A+++EN P+GT+V+ KA D D G+N+K+ +++ G
Sbjct: 2476 NGPVFELNSYHASIEENLPVGTVVLQPKATDKD-EGLNAKLRFNLLG------------- 2521
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG-TPPRET 115
H D G I LLDRE Y LTL A D T PR T
Sbjct: 2522 --EHMTRFHINTDTG------EITTAALLDREETDT-YRLTLMAQDSSITEPRAT 2567
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF Y A + E P G+ V ++ A D D G+N++I Y + G+ L +FT+D+
Sbjct: 500 HEPVFEKSEYTAVLSELAPKGSFVASIAATDEDT-GVNAQIHYEILSGNELKWFTMDSAT 558
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
L IV + LDRE+ L++ A D G P+ Y
Sbjct: 559 GL--------------------IVTSEPLDREVQD-SVELSISARDGGPNPKYAY 592
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F Y + + EN PIG V+T+ A D D G N I Y++ GD F I + G
Sbjct: 2004 NAPIFDPMSYSSEIFENVPIGMEVVTVSAKDID-SGNNGLIEYTITAGDDKNEFDISSNG 2062
Query: 62 PLNHFR 67
+ R
Sbjct: 2063 TIRTRR 2068
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N+PVF Y A+V EN IG +V+ + A D D G N +I YS+ GD F+I
Sbjct: 2263 NSPVFDPKQYSASVAENASIGAMVLQVSATDVD-EGANGRIRYSILTGDQNHDFSI 2317
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAP F+ + +V E PIGT ++ +A+DAD G+NS++ +S+ G+ F ID+
Sbjct: 1365 NAPEFTQSSSEVSVPETSPIGTELMRFRASDAD-QGLNSQVVFSITAGNRRDTFHIDS 1421
Score = 42.7 bits (99), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 13/109 (11%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
NAP F Y T+ E P GT +I + DAD G+N + YS+ G+ G+F +D+
Sbjct: 1259 NAPEFLRGPYHVTLSEGSPEGTHIIHIFTQDAD-EGLNGDVYYSLFSGNEGGHFNLDSAT 1317
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIA---PLGYNLTLRAV 106
G L+ R + ++ ++ VL ++ R+ A PL N T+ V
Sbjct: 1318 GQLSLARHL--------DRESQDLHVLTIVARDAALVQPLSSNTTITIV 1358
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 16/113 (14%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
APVF + +V EN I T+V+ +KA D D G N I YS+ D + DN+ P
Sbjct: 2153 APVFVS-ANETSVMENVSINTVVMAVKAVDYDE-GRNGYIDYSL-NTDQANADSNDNDLP 2209
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
F + PT + + V+ LDRE+ Y L + A D+G PP+ T
Sbjct: 2210 ---FSLNPT---------DGLLRVVNALDRELCS-SYVLNITAQDRGEPPQST 2249
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P F+ Q + EN+P GT ++TL A D D P +Y ++GG + +ID
Sbjct: 3628 NGPTFAPEALQGYIAENEPPGTSIMTLAATDPDLPHNGGPFTYYLKGGPHKSWLSID 3684
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 20/101 (19%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
ATV EN GT+V + D+D G N + + G+ LG+F +D + PL H
Sbjct: 404 ATVDENAANGTVVAAVSVIDSD-DGPNGETITRLVSGNELGHFRLD-KTPLFHI------ 455
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ V +LDRE YNLT+ A+D G P R
Sbjct: 456 -----------VRVNGVLDREEIS-KYNLTVVALDGGIPAR 484
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+ P FS YQ V EN PIG+ +IT+ A D D G N + + + GG+ F+++ +
Sbjct: 3206 HTPEFSARRYQVIVPENVPIGSTIITVVATDPD-LGPNGILRFGISGGNERQDFSVNEQ 3263
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDN 59
N PVF+ Y + + EN+P GT V A D D P N+ I Y+ + G +F++++
Sbjct: 3311 NPPVFNQTEYHSYIAENKPTGTFVFQAHATDKDSP-KNAIIQYAFLPSGTDRHFFSVNS 3368
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF Y+ ++ E+ + L A+D+D G N++ISYS+ G+G F I +G
Sbjct: 1033 HTPVFDHTSYETSLLESTKVNARFFGLAASDSDV-GENARISYSIIEGNGDKVFGIFPDG 1091
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
L V LDRE Y LT+ D G P R +
Sbjct: 1092 YL---------------------FVRSPLDREERDY-YALTVACEDAGYPSRSS 1123
>gi|405962160|gb|EKC27862.1| Protocadherin Fat 4 [Crassostrea gigas]
Length = 1983
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 60/114 (52%), Gaps = 21/114 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG--DGLGYFTIDN 59
NAP+F+ +Y V EN +G +++++ A DAD G N++ISYS+ DG I N
Sbjct: 1438 NAPIFTRRIYSTEVLENFAVGGVLLSVTAHDAD-KGSNARISYSIDMNLLDG----AIAN 1492
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
E HF + PT D I +K LDRE+ ++++ A D GTP +
Sbjct: 1493 E----HFSMNPTSGD---------IKSIKQLDRELYA-NISMSVIATDGGTPAQ 1532
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 22/105 (20%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
Y ++ EN+P+ +L+ +L A D D G N + YS+ G+ P HFRI
Sbjct: 1237 YDRSIPENEPVHSLIFSLSAKDPD-TGDNGRFLYSIISGN-----------PDFHFRIEQ 1284
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
T+ + + LDRE PL Y L ++A D GTP + +
Sbjct: 1285 TR---------GYVQISTDLDRERQPL-YELVIQATDLGTPRKSS 1319
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG---GDGLGYFTID 58
P F+ VY TV EN IGT + T+ A D+D G N+ ++Y ++ G G G FT+D
Sbjct: 1335 PRFNQDVYSLTVPENSIIGTSIGTISATDSD-LGNNAIVTYRIKSFLEGHG-GKFTVD 1390
>gi|189236209|ref|XP_971084.2| PREDICTED: similar to AGAP007924-PA [Tribolium castaneum]
Length = 4974
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 51/110 (46%), Gaps = 21/110 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F +Y+ + E P+G+ V +KA D D N++ SYS+ GG+ F
Sbjct: 3415 PEFLQTLYEVEISEGAPVGSKVTAVKAVDKDVRPQNNQFSYSIIGGNIEQAF-------- 3466
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
KIDP + + E + LDRE P Y+L + +D G PP+
Sbjct: 3467 --------KIDPQSGQIE----TARFLDRETTP-EYSLVVGGIDTGLPPQ 3503
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 57/113 (50%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQ--PIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P F D Y A V EN P G VIT++A DAD P +NS + Y ++
Sbjct: 2256 NPPTFLDSPYLAYVMENTIPPNGGYVITVQAYDADTPPLNSLVRYFIK------------ 2303
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
EG + F KI+ T + I +L+ LDRE A Y L+L A+D G+PP
Sbjct: 2304 EGKPDTF-----KINASTGE----ISLLRALDRE-AQAEYTLSLGAMDTGSPP 2346
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF+ YQ V EN+P+G+ ++T+ A+D D G N I Y + GG+ F +D
Sbjct: 3100 PVFTALSYQVIVPENEPLGSTILTVNASD-DDQGPNGMIRYKISGGNERKEFAVD 3153
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 49/118 (41%), Gaps = 23/118 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F Y + EN I T ++T+ A D D G N KI + + GD G F + G
Sbjct: 1934 NTPLFDPMSYTNEIFENVSIATPIVTVSATDLD-SGDNGKIVFRITAGDENGDFEMTPNG 1992
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
++ K LDRE L YNL + A D+ PP + +T
Sbjct: 1993 ---------------------TVITKKELDRERQGL-YNLVVTATDQAKPPDQRLSST 2028
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 49/108 (45%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ V E P+GT VI L +DAD G+N + YS+ G+ G FTI
Sbjct: 1194 NPPKFLRTPYRVQVSEGSPVGTQVIRLFTSDAD-EGLNGDVFYSIVQGNDDGRFTI---- 1248
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
++ I++ K+LDRE Y LT+ A D G
Sbjct: 1249 ----------------EEATGQIILSKILDRETVS-NYLLTVVARDAG 1279
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 50/113 (44%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F Y AT+ EN P+ T V+T A D D G+N+KI YS+ GD + F ID +
Sbjct: 2363 HTPEFKRQSYHATINENSPLSTWVVTPTATDKD-IGLNAKIRYSLL-GDKVDRFKIDQDA 2420
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD-KGTPPR 113
+ I +LDRE + Y T+ A D T PR
Sbjct: 2421 GI--------------------ITTSAILDREETEI-YYFTVMAQDCSATEPR 2452
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N+PVF Y A++ EN IG V+ + A D D G+N ++ YS+ GD F+I
Sbjct: 2146 NSPVFDPKQYSASIAENASIGASVLQVSATDVD-DGLNGRVRYSINSGDTNRDFSI 2200
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N+P F+ +Y+A + EN P + V +KA D D P N+ I YS+ G F ID +
Sbjct: 3203 NSPTFNQSIYEAYISENLPPNSFVFQVKATDIDSP-KNAIIQYSISDGPDKDMFAIDQK 3260
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ +Y A++ E + LV+ + A D D G N +++Y + D G F ID+E
Sbjct: 2678 NSPVFNSNLYNASILEEESPPQLVVKVSAEDLD-SGENGQVTYKLT-DDFDGTFEIDSES 2735
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I LDRE P Y LT+ A+D+G P
Sbjct: 2736 G--------------------EIYTNARLDREETP-AYELTVEALDQGVP 2764
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF Y+ ++ E+ P+ L A+D D G+N +ISY + G+ G F I +G
Sbjct: 981 HTPVFDHTSYETSLLESTPVNERFFALAASDTD-LGLNGRISYVISEGNTEGKFGIFPDG 1039
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
L V + LDRE Y+L++ A D G P R +
Sbjct: 1040 FL---------------------YVRQSLDREDKDY-YSLSVTASDLGNPSRSS 1071
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 26/115 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y + V ++ G L++ + A D G+N++I+Y + GG+G F ID
Sbjct: 2993 NAPKFDKPEYLSPVPDDAQEGQLLLKVTAKDKLDFGVNAEINYVIVGGNGSENFAID--- 3049
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG--YNLTLRAVDKGTPPRE 114
+YN + L + + +G Y L +RA+DKG PP+
Sbjct: 3050 -------------------KYNGWI--TLTKPVTEIGQEYLLRVRAIDKGVPPQH 3083
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 48/106 (45%), Gaps = 23/106 (21%)
Query: 12 QATVKENQPIGTLVITLKAADADPPGMNSKISYSVR-GGDGLGYFTIDNEGPLNHFRIVP 70
+ +V EN I T+V+ +KA D D G N I YS+ G F++ GP++ V
Sbjct: 2050 ETSVAENIAINTVVMAVKAIDKDE-GRNGYIEYSLSPDSASSGTFSL---GPVDGLLRVS 2105
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ID TK Y L++ A D+G PPR T+
Sbjct: 2106 GRIDRETKSN------------------YTLSITARDRGDPPRATH 2133
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF Y A + E P GT V + A D D G+N++I Y+ G+ +F+I+++
Sbjct: 464 HEPVFEKSEYSAILSELAPSGTYVAGITATDED-SGVNAQIYYAFVSGNEHQWFSINSDT 522
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
L I +LDRE+ L + A D G P+ Y
Sbjct: 523 GL--------------------ITTRDILDREVQGT-VELNISARDGGPNPKWAY 556
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+P F+ + +V E P+ T +I +A DAD GMNS++ +S+ G+ F +D
Sbjct: 1300 NSPEFTQTNSKISVIETTPVNTELIQFRATDAD-LGMNSEVVFSISAGNRKDTFHVD 1355
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 29/117 (24%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P FS Y+ + + G V +A+D D G+NSKISY++ G +
Sbjct: 2468 NSPSFSSTKYEVNISDKTKAGEFVFGARASD-DDIGINSKISYALTGEHAPNF------- 2519
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG---YNLTLRAVDKGTPPRET 115
I+P T V+K +++A LG +NL + A D G PR+T
Sbjct: 2520 ----------TINPETG-------VIKAA-QDLAKLGTKVFNLEIEAADGGKKPRKT 2558
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 51/123 (41%), Gaps = 39/123 (31%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP FS + ++ EN P GTL+ L A+D D G N ++YS+
Sbjct: 570 APRFSQSKFNVSLSENAPPGTLIAMLTASDHD-QGTNGSVAYSLH--------------- 613
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVL----------KLLDREIAPLGYNLTLRAVDKGTPP 112
P T++ N++VL K LDRE Y + + A D+G PP
Sbjct: 614 ------------PVTQQHYDNVLVLDSLTGQLTTRKKLDREEIS-HYEIHVIAKDQGLPP 660
Query: 113 RET 115
+ +
Sbjct: 661 QSS 663
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 45/112 (40%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y E Q V + A D D G NS ISYS+ +
Sbjct: 2882 NAPEFEHSFYSFNFPELQRDVVFVGQVAATDRDKQGPNSVISYSL-------------QQ 2928
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVDKGTPP 112
P + F + P D +K+ + K E +P Y+LT+ A D G PP
Sbjct: 2929 PSDLFTVDPASGDIFSKRS----LRFKYTQMEASPENMYSLTILATDNGKPP 2976
>gi|301607021|ref|XP_002933123.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3-like
[Xenopus (Silurana) tropicalis]
Length = 3142
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 40/112 (35%), Positives = 52/112 (46%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
NAP F++ Y V E+ P T V+ + A D D N ++ Y+ + G DG G FTI+
Sbjct: 775 NAPQFANTQYHGIVSEDAPPFTSVVQISATDRDSHS-NGRVQYTFQNGDDGDGDFTIE-- 831
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PT T +K LDRE P Y LT AVD+G PP
Sbjct: 832 ---------PTSGIIRTVRK---------LDRESVPF-YELTAYAVDRGMPP 864
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 49/111 (44%), Gaps = 25/111 (22%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG---GDGLGYFTIDNE 60
P F + YQ V ENQP GT VIT+ A D D G ++ Y++ L F+ID+
Sbjct: 145 PHFPQYNYQVQVAENQPPGTPVITMSAQDPD-TGEAGRLRYTMDALMNSKSLELFSIDSV 203
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L I +++LDRE L Y + A+D GTP
Sbjct: 204 TGL--------------------ISTIEILDRESMDLHY-FRVSAIDHGTP 233
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 51/110 (46%), Gaps = 24/110 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF Y + E++PIG+ V+ + A+D D G N++I+YS+ E +
Sbjct: 674 PVFQSAHYPVDINEDRPIGSTVVIISASDED-VGENARITYSL-------------EDNI 719
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
FRI P D G I + +LD E + Y L + A D G P +
Sbjct: 720 PQFRIDP---DTGA------ITLRAMLDYE-DQVTYTLAVIAKDNGIPQK 759
Score = 39.7 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN-- 59
+AP+F +Q +V EN P+G +I ++A DAD G NS++ Y + G F I++
Sbjct: 465 HAPIFVSTPFQVSVLENAPLGHSIIHIQAIDAD-YGENSRVEYKLTGMKPESPFVINSAT 523
Query: 60 -----EGPLN 64
GPL+
Sbjct: 524 GWITVSGPLD 533
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAPVF ++ VKEN +G++V +KA D D G N++I Y + G+ F +D
Sbjct: 881 NAPVFPADEFEVYVKENSIVGSVVGKIKATDPD-EGPNAQIMYQIVEGNIPEIFQMD 936
Score = 35.8 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS+ Y V+E+ T ++ + A D D N+ + Y++ G+ G F+ID+
Sbjct: 359 NVPQFSEKRYIVQVREDIKTHTEIVRVTATDIDKDS-NALVHYNIISGNSRGQFSIDS-- 415
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+IV T +D T+++ Y L +RA D G PP
Sbjct: 416 VTGEVQIV-TPLDFETERE------------------YTLRVRAQDAGRPP 447
Score = 35.8 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y + E+ +GT V+++ A D D +NS I+Y + GG+ + I +G
Sbjct: 570 NRPEFTQREYFIRLNEDATVGTSVLSVTAIDRD---VNSAITYQITGGNTRNRYAISTQG 626
>gi|54013438|dbj|BAD60808.1| protocadherin2-gamma-v5-sCP1 [Danio rerio]
Length = 969
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 22/116 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P + T+ EN P+GT V + DAD G +GL +F+I+
Sbjct: 354 NPPTIQLMSFSNTIAENSPVGTTVAVINVEDAD------------SGKNGLVHFSINQN- 400
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+P KI+ T + Y+++ +LDRE YN+T+ D+G+P R + K
Sbjct: 401 -------IPFKIE-STFSEYYSLITDDMLDRETV-TEYNITILVSDQGSPARHSNK 447
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 20/108 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPV V++ V+EN P GT++ T+ AADAD G+N +SY YF + N+
Sbjct: 249 NAPVCKQSVFKTEVRENSPAGTVMGTVSAADAD-EGVNGHVSY---------YFALANKE 298
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
F I + + +L LD E + Y L + A DKG
Sbjct: 299 ERELFNI---------NSETGEVTLLAHLDYE-SQNSYQLNINARDKG 336
>gi|119514233|gb|ABL75896.1| protocadherin 2G21 [Takifugu rubripes]
Length = 952
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR--GGDGLGYFTID 58
NAPVF+ VY+A++ EN IGT V+T+ A DAD G+N I+YS+ G FTID
Sbjct: 240 NAPVFNQSVYKASIMENTKIGTNVVTVNATDAD-SGINGLITYSLSKMKGGAAEIFTID 297
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PV + + +TV E+ P GT + DAD +GL ++D
Sbjct: 345 NPPVINVMSFSSTVSEDAPPGTTIAVFNVKDAD------------SDKNGLIKCSLD--- 389
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
R +P KI+ + YN++ + DRE YN+T+ A D GTPP T
Sbjct: 390 -----RKLPFKIE-SSLTNYYNLISDQFFDRESVS-KYNITVTATDSGTPPLST 436
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 14/123 (11%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR----GGDGL-GYFT 56
NAP+F Y A + EN GT + T A D+D N++ISY + GG + Y +
Sbjct: 450 NAPLFEKQSYSAYIVENNSPGTSIFTFSARDSD-WNQNARISYILEETHIGGSPISSYLS 508
Query: 57 IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV---DKGTPPR 113
+++E + I + + KE IVV K D PL N++++ + PP+
Sbjct: 509 LNSENGV----ISAARSFDYEQIKELQIVV-KAQDGGSPPLSSNVSVKILIQDQNDNPPQ 563
Query: 114 ETY 116
Y
Sbjct: 564 VLY 566
>gi|345309006|ref|XP_001515584.2| PREDICTED: protocadherin gamma-A10-like [Ornithorhynchus anatinus]
Length = 850
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
NAPVF+ VY+ V E+ P+GTLV+T+ A D D G+N++++YS R
Sbjct: 238 NAPVFTQSVYEVKVPEDAPVGTLVVTVNATDPD-EGINAEVTYSFR 282
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP + ++V E+ P GT++ L D D G DGL +I +
Sbjct: 343 NAPEVTITSLTSSVSEDSPPGTVIALLNVHDRDS------------GDDGLVTCSIPDNL 390
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P F++ + Y++V LDRE+ P YN+T+ A D+G+PP
Sbjct: 391 P---FKL------KKSYGNYYSLVTENALDRELIPY-YNVTVIATDRGSPP 431
>gi|313236914|emb|CBY12163.1| unnamed protein product [Oikopleura dioica]
Length = 937
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 5/58 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF + + +VKEN+PIGT + L AADAD +N +I+YS + +FTID+
Sbjct: 550 NAPVFENPSSKISVKENKPIGTFITQLTAADAD---LNDEINYSFK--TKTSFFTIDS 602
Score = 39.3 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F VY + EN IG ++ + A D D G N++ISY + + L F ID E
Sbjct: 446 NAPSFKHDVYNGEIAENNEIGDTIVQITAFDPD-FGKNAEISYEISEHENL--FVIDPET 502
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
++ L D E+ P ++ + A D G+P
Sbjct: 503 A--------------------DLKALVSFDAELFPDPISINIIATDNGSP 532
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 20/107 (18%)
Query: 12 QATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPT 71
+A V E+ P+G+ V + D D G ++S + G D HF++V
Sbjct: 349 RAAVNEDLPVGSFVAYVSVTD-DDLGPAGEVSLVLEGSD--------------HFKLVAV 393
Query: 72 KIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
+ GT + + + V LDREI Y LTL A D GT +ET K+
Sbjct: 394 E---GTSDR-FMLTVAAPLDREIKE-EYFLTLIARDNGTSAQETLKS 435
>gi|383849585|ref|XP_003700425.1| PREDICTED: protocadherin-like wing polarity protein stan-like
[Megachile rotundata]
Length = 3164
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 25/113 (22%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGD-GLGYFTIDN 59
+PVF + Y +V E+ PIGT V+ + A D+D G N++++YS+ GGD FT
Sbjct: 801 SPVFENAPYSVSVFEDAPIGTTVLVVSATDSD-VGKNAQVTYSLDTDGGDQSASEFT--- 856
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I+P T I + LDRE+ P Y LT+ A D G PP
Sbjct: 857 -------------INPQTGA----ITTTRPLDRELIP-AYLLTVTARDGGVPP 891
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 15/120 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F Y A+V+E P+G+ V+T+KA D D G N+++ YS+ T G
Sbjct: 362 HAPNFEWPEYDASVREGVPVGSTVVTVKATDQD-AGRNAELEYSILS-------TTSGSG 413
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP--RETYKAT 119
N + +IDP + + LDRE + Y + L D+ TPP R+T AT
Sbjct: 414 TANSEDTLIFRIDP----RSGVVTTRTPLDREKTEV-YTVILSVSDQATPPSARKTANAT 468
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF YQ ++ E+ +GT V+ + A DAD +N ++ Y++ DG G F +D+
Sbjct: 908 NSPVFEAPQYQGSIPEDVLVGTSVLRVSATDAD-TDLNGRVRYAL-DDDGDGAFAVDSTT 965
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I K LDRE + Y L A+D+G+P T
Sbjct: 966 GI--------------------IRTAKPLDRE-SVARYVLKAIAMDRGSPSLST 998
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 49/113 (43%), Gaps = 18/113 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F +Q +V EN IG ++ ++A DAD G N++I Y++ D
Sbjct: 586 NAPRFYTSHFQESVSENVAIGCSILRIQAYDAD-EGANAQIKYTIGARD----------- 633
Query: 62 PLNHFRIVPTKIDPGTKKKEYN-IVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
F T+ P T E I K LDRE Y T+ A D G P+
Sbjct: 634 ----FSGASTENFPITVSSETGWIYTTKQLDREQCSR-YQFTVIAADSGEAPK 681
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 20/109 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F + + EN P+G+ V + A D D G N+ + YSV GG+ F ++
Sbjct: 1014 PAFENDKIVLYIAENSPVGSTVGEIYAHDPD-EGPNAVVQYSVIGGEDSNSFALN----- 1067
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ PG+ + E ++ L+ LD E + L +RA +PP
Sbjct: 1068 ---------VRPGSDRAE--LITLEELDYESPKKKFELVVRA---ASPP 1102
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F Y+A V E+ P GT V ++ A D P +++I Y + G+ G F+I ++
Sbjct: 697 NDPYFDPKNYEAVVSEDDPPGTPVTSVTATD---PDEDARIHYEITTGNTRGRFSIASQ 752
Score = 35.4 bits (80), Expect = 8.2, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 24/114 (21%)
Query: 2 NAPVFSDFVYQATVKEN--QPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P F++ Y + E+ ++ ++A DAD G N+ + Y++ GG+ F+ID+
Sbjct: 479 NYPQFTERTYSVWIPEDLDYTANPVIARIRATDADS-GNNAAVRYAIIGGNTQNTFSIDS 537
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
++ ++K LD E + Y + +RA D G+P R
Sbjct: 538 MSG--------------------DVALVKPLDYE-STRSYKIVIRAQDGGSPAR 570
>gi|109128808|ref|XP_001082774.1| PREDICTED: cadherin-5 isoform 4 [Macaca mulatta]
Length = 663
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ ++ A+V E+ +GT VI++ A DAD P + S + G YF IDN G
Sbjct: 148 NWPVFTHRLFNASVPESSAVGTSVISVTAVDADDPTVGDHASVMYQILKGKEYFAIDNSG 207
Query: 62 PLNHFRIVP-TKIDPGTKKKEYNIVV 86
RIV TK K+ Y IVV
Sbjct: 208 -----RIVTITKSLDREKQARYEIVV 228
>gi|395747952|ref|XP_002826544.2| PREDICTED: cadherin-5 [Pongo abelii]
Length = 898
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ ++ A+V E+ +GT VI++ A DAD P + S + G YF IDN G
Sbjct: 261 NWPVFTHRLFNASVPESSAVGTSVISVTAVDADDPTVGDHASVMYQILKGKEYFAIDNSG 320
Query: 62 PLNHFRIVP-TKIDPGTKKKEYNIVV 86
RIV TK K+ Y IVV
Sbjct: 321 -----RIVTITKSLDREKQARYEIVV 341
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y V E+ +GT V +L D D P N YS+ GD FTI+
Sbjct: 368 NFPFFTQTKYTFVVPEDTRVGTSVGSLFVEDPDEP-QNRMTKYSILRGDYQDAFTIETNP 426
Query: 62 PLNHFRIVPTK 72
N I PTK
Sbjct: 427 THNEGIIKPTK 437
>gi|345305479|ref|XP_001509569.2| PREDICTED: protocadherin-20-like [Ornithorhynchus anatinus]
Length = 981
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ + + +++EN + L A DAD G +SY + G D YF++D
Sbjct: 561 NAPVFAQSLIELSIEENNAPDAFLTKLHATDADS-GERGAVSYFL-GPDAPSYFSLDK-- 616
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
L V T++D K+K Y T+RAVD G PPRE+
Sbjct: 617 -LTGVLTVSTQLDREEKEK------------------YRYTVRAVDSGLPPRES 651
>gi|410933153|ref|XP_003979956.1| PREDICTED: protocadherin gamma-B7-like, partial [Takifugu rubripes]
Length = 923
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAPVF+ Y++TV EN P GT+V T+ A+DAD G N KI+YS+
Sbjct: 776 NAPVFTQSTYKSTVTENAPKGTVVATVTASDAD-DGANRKITYSI 819
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG 51
NAPVF+ Y+ V EN GT+V T+ A+DAD G N+KI+YS+ G
Sbjct: 228 NAPVFTQSTYKTVVTENSAKGTVVATVTASDAD-DGANNKITYSITNALG 276
>gi|109128806|ref|XP_001082902.1| PREDICTED: cadherin-5 isoform 5 [Macaca mulatta]
Length = 670
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ ++ A+V E+ +GT VI++ A DAD P + S + G YF IDN G
Sbjct: 148 NWPVFTHRLFNASVPESSAVGTSVISVTAVDADDPTVGDHASVMYQILKGKEYFAIDNSG 207
Query: 62 PLNHFRIVP-TKIDPGTKKKEYNIVV 86
RIV TK K+ Y IVV
Sbjct: 208 -----RIVTITKSLDREKQARYEIVV 228
>gi|54013436|dbj|BAD60807.1| protocadherin2-gamma-v5-A [Danio rerio]
Length = 951
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 22/116 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P + T+ EN P+GT V + DAD G +GL +F+I+
Sbjct: 354 NPPTIQLMSFSNTIAENSPVGTTVAVINVEDAD------------SGKNGLVHFSINQN- 400
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+P KI+ T + Y+++ +LDRE YN+T+ D+G+P R + K
Sbjct: 401 -------IPFKIE-STFSEYYSLITDDMLDRETV-TEYNITILVSDQGSPARHSNK 447
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 20/108 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPV V++ V+EN P GT++ T+ AADAD G+N +SY YF + N+
Sbjct: 249 NAPVCKQSVFKTEVRENSPAGTVMGTVSAADAD-EGVNGHVSY---------YFALANKE 298
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
F I + + +L LD E + Y L + A DKG
Sbjct: 299 ERELFNI---------NSETGEVTLLAHLDYE-SQNSYQLNINARDKG 336
>gi|54013440|dbj|BAD60809.1| protocadherin2-gamma-v5-sCP2 [Danio rerio]
Length = 832
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 22/116 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P + T+ EN P+GT V + DAD G +GL +F+I+
Sbjct: 354 NPPTIQLMSFSNTIAENSPVGTTVAVINVEDADS------------GKNGLVHFSINQN- 400
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+P KI+ T + Y+++ +LDRE YN+T+ D+G+P R + K
Sbjct: 401 -------IPFKIE-STFSEYYSLITDDMLDRETVT-EYNITILVSDQGSPARHSNK 447
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 20/108 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPV V++ V+EN P GT++ T+ AADAD G+N +SY YF + N+
Sbjct: 249 NAPVCKQSVFKTEVRENSPAGTVMGTVSAADAD-EGVNGHVSY---------YFALANKE 298
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
F I + + +L LD E + Y L + A DKG
Sbjct: 299 ERELFNI---------NSETGEVTLLAHLDYE-SQNSYQLNINARDKG 336
>gi|410925628|ref|XP_003976282.1| PREDICTED: protocadherin alpha-8-like [Takifugu rubripes]
Length = 808
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 56/117 (47%), Gaps = 19/117 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS VY T+ EN P+G+ V+ + A D D G N ++SYS N
Sbjct: 239 NTPVFSKDVYSVTLPENAPLGSAVVQVNATDLD-EGQNGEVSYS-----------FGNSV 286
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
N F++ I+P T + I V L+D E Y + + A DKG PP T K+
Sbjct: 287 SNNIFQLF--GINPSTGE----ITVKGLIDYEQKD-KYEIEIEASDKGLPPLTTEKS 336
>gi|148683471|gb|EDL15418.1| mCG114390 [Mus musculus]
Length = 2572
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 26/112 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ VYQA+V E Q VI + A D D G+NS+I YS+ G+ G F ID
Sbjct: 1443 NPPRFAQSVYQASVSEGQFYSVHVIQVSATDLD-QGLNSQIEYSIVSGNQAGAFRID--- 1498
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVL--KLLDREIAPLGYNLTLRAVDKGTP 111
E N V+L +LD E + Y+L ++A D+G P
Sbjct: 1499 -------------------ELNGVILTNSILDYE-SSGSYSLIVQATDRGVP 1530
Score = 42.7 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
P F +Y+ +VKENQ G V ++A D D G+NSK + + G G F I+
Sbjct: 965 PAFKQLLYETSVKENQSPGVFVTRVEAEDTD-SGVNSKHQFEIMPGPAFGLFEIN 1018
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 21/115 (18%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID---- 58
AP F Y ++ E+ PIG+ ++T D D N+ YS+ G+ YF I+
Sbjct: 1751 APEFPAGCYNLSLSEDTPIGSTLMTFSTIDGDYSFENTHTEYSIISGNLHNYFHIETSLL 1810
Query: 59 -NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+E P ++ +V+L LDRE A + L + A D PP
Sbjct: 1811 GSEHP---------------HQQRGALVLLHALDRE-ASASHKLVILASDHSCPP 1849
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAP FS YQA VKE+ P+G+ + + A D D G +++I Y + G+ +F +++
Sbjct: 1866 NAPTFSSRRYQAHVKESTPVGSHITMVSADDPD-KGSHAEIIYGIISGNEKEHFYLED 1922
Score = 38.5 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 20/108 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F D +++EN P+GTLV A D D +NS+I YF +
Sbjct: 474 HSPSFQDEFIVISIEENVPVGTLVYVFNAKDGDGSFLNSRIQ----------YFAESSSV 523
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+N F I P+ +V LDRE P + LT+ A D+
Sbjct: 524 GVNPFLIHPS---------SGALVTASPLDRENVPT-FILTVTASDQA 561
Score = 38.5 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 20/108 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F D +++EN P+GTLV A D D +NS+I YF +
Sbjct: 749 HSPSFQDEFIVISIEENVPVGTLVYVFNAKDGDGSFLNSRIQ----------YFAESSSV 798
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+N F I P+ +V LDRE P + LT+ A D+
Sbjct: 799 GVNPFLIHPS---------SGALVTASPLDRENVPT-FILTVTASDQA 836
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
++P F YQ++++E+ +GT+V+ L A D D G+N ++ Y + + G FTID+
Sbjct: 1172 HSPAFPMLHYQSSIREDAEVGTVVLVLSAVDRD-EGLNGQVEYFLM-EEVSGAFTIDH 1227
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N PVF+ YQA V E P G LV+TL A D + G ISY +
Sbjct: 1648 NPPVFTQDFYQAAVPELTPGGYLVLTLSATDLESSG---DISYRI 1689
>gi|402908616|ref|XP_003917032.1| PREDICTED: cadherin-5 [Papio anubis]
Length = 785
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ ++ A+V E+ +GT VI++ A DAD P + S + G YF IDN G
Sbjct: 148 NWPVFTHRLFNASVPESSAVGTSVISVTAVDADDPTVGDHASVMYQILKGKEYFAIDNSG 207
Query: 62 PLNHFRIVP-TKIDPGTKKKEYNIVV 86
RIV TK K+ Y IVV
Sbjct: 208 -----RIVTITKSLDREKQARYEIVV 228
>gi|109128804|ref|XP_001082641.1| PREDICTED: cadherin-5 isoform 3 [Macaca mulatta]
gi|297284159|ref|XP_002802557.1| PREDICTED: cadherin-5 [Macaca mulatta]
Length = 785
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ ++ A+V E+ +GT VI++ A DAD P + S + G YF IDN G
Sbjct: 148 NWPVFTHRLFNASVPESSAVGTSVISVTAVDADDPTVGDHASVMYQILKGKEYFAIDNSG 207
Query: 62 PLNHFRIVP-TKIDPGTKKKEYNIVV 86
RIV TK K+ Y IVV
Sbjct: 208 -----RIVTITKSLDREKQARYEIVV 228
>gi|354482810|ref|XP_003503589.1| PREDICTED: protocadherin-20 [Cricetulus griseus]
gi|344248764|gb|EGW04868.1| Protocadherin-20 [Cricetulus griseus]
Length = 952
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + + T++EN + L A DAD G ++SY + G D YF++DN
Sbjct: 532 NAPVFLQPLIELTIEENNAPNAFLTKLYATDAD-SGERGQVSYFL-GPDAPSYFSLDN-- 587
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ V T++D K+K Y T+RAVD G PPRE+
Sbjct: 588 -VTGILTVSTQLDREEKEK------------------YRYTVRAVDCGKPPRES 622
>gi|54013442|dbj|BAD60810.1| protocadherin2-gamma-v5-sCP1-2 [Danio rerio]
Length = 850
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 22/116 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P + T+ EN P+GT V + DAD G +GL +F+I+
Sbjct: 354 NPPTIQLMSFSNTIAENSPVGTTVAVINVEDADS------------GKNGLVHFSINQN- 400
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+P KI+ T + Y+++ +LDRE YN+T+ D+G+P R + K
Sbjct: 401 -------IPFKIE-STFSEYYSLITDDMLDRETVT-EYNITILVSDQGSPARHSNK 447
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 20/108 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPV V++ V+EN P GT++ T+ AADAD G+N +SY YF + N+
Sbjct: 249 NAPVCKQSVFKTEVRENSPAGTVMGTVSAADAD-EGVNGHVSY---------YFALANKE 298
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
F I + + +L LD E + Y L + A DKG
Sbjct: 299 ERELFNI---------NSETGEVTLLAHLDYE-SQNSYQLNINARDKG 336
>gi|348514379|ref|XP_003444718.1| PREDICTED: protocadherin Fat 4-like [Oreochromis niloticus]
Length = 1739
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF +Y++T+KEN P GT++IT+ A+D D G N KISY++ T D
Sbjct: 1337 NAPVFPQKIYKSTLKENSPEGTVLITVSASDLD-DGSNGKISYTILNSVDDASETFDVNR 1395
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
++V KK++Y I V
Sbjct: 1396 ETGEIKLVGNT--DFEKKRQYQIHV 1418
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG--GDGLGYFTIDN 59
N PVF+ +Y+ATV EN PIGT + T+ A+DAD G N +SY+ G F ID+
Sbjct: 242 NPPVFNQSLYKATVAENAPIGTYITTVNASDAD-SGSNGLVSYTFSNVKGKSAEKFEIDS 300
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 10/98 (10%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG--DGLGYFTIDN 59
NAPV S Y+ VKE+ GT++ T+ A+DAD G++ ++ YS+ L F ID
Sbjct: 537 NAPVCSQVEYKTNVKEDSSKGTILTTVTASDAD-EGLHGQVRYSISNAPKGALELFNIDE 595
Query: 60 E-------GPLNHFRIVPTKIDPGTKKKEYNIVVLKLL 90
+ G L++ + +ID + N V K+L
Sbjct: 596 KSGMFTLVGELDYEKFRHFEIDVQASDEGGNADVCKVL 633
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVF Y+A + EN G + T+KA DAD N+++SY
Sbjct: 747 NAPVFERSSYEAYIVENNTPGLSIFTVKATDAD-WNQNARVSY 788
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVF Y+A + EN G + T+KA DAD N+++SY
Sbjct: 1001 NAPVFERSSYEAYIVENNTPGLSIFTVKATDAD-WNQNARVSY 1042
>gi|157649899|gb|ABV59324.1| protocadherin epsilon6 [Callorhinchus milii]
Length = 796
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 53/114 (46%), Gaps = 25/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTID 58
NAP+F+ +Y+A+V EN P GTLV + AAD D G N++I Y+ G F +D
Sbjct: 232 NAPLFNHEIYRASVPENAPKGTLVTQINAADLD-QGTNAEIKYTFSKHSAERGRELFQLD 290
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+E K+ G +E NI Y L ++A D G PP
Sbjct: 291 SETG-------EIKVQAGLDFEEANI--------------YELYVQATDNGAPP 323
>gi|94369682|ref|XP_143371.6| PREDICTED: similar to cadherin protein [Mus musculus]
Length = 2842
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 26/112 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ VYQA+V E Q VI + A D D G+NS+I YS+ G+ G F ID
Sbjct: 1712 NPPRFAQSVYQASVSEGQFYSVHVIQVSATDLD-QGLNSQIEYSIVSGNQAGAFRID--- 1767
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVL--KLLDREIAPLGYNLTLRAVDKGTP 111
E N V+L +LD E + Y+L ++A D+G P
Sbjct: 1768 -------------------ELNGVILTNSILDYE-SSGSYSLIVQATDRGVP 1799
Score = 43.1 bits (100), Expect = 0.039, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 21/115 (18%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID---- 58
AP F Y ++ E+ PIG+ ++T D D N+ YS+ G+ YF I+
Sbjct: 2020 APEFPAGCYNLSLSEDTPIGSTLMTFSTIDGDYSFENTHTEYSIISGNLHNYFHIETSLL 2079
Query: 59 -NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+E P ++ +V+L LDRE A + L + A D G PP
Sbjct: 2080 GSEHP---------------HQQRGALVLLHALDRE-ASASHKLVILASDHGCPP 2118
Score = 42.7 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
P F +Y+ +VKENQ G V ++A D D G+NSK + + G G F I+
Sbjct: 1196 PAFKQLLYETSVKENQSPGVFVTRVEAEDTD-SGVNSKHQFEIMPGPAFGLFEIN 1249
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAP FS YQA VKE+ P+G+ + + A D D G +++I Y + G+ +F +++
Sbjct: 2135 NAPTFSSRHYQAHVKESTPVGSHITMVSADDPD-KGSHAEIIYGIISGNEKEHFYLED 2191
Score = 38.5 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 20/108 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F D +++EN P+GTLV A D D +NS+I YF +
Sbjct: 980 HSPSFQDEFIVISIEENVPVGTLVYVFNAKDGDGSFLNSRIQ----------YFAESSSV 1029
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+N F I P+ +V LDRE P + LT+ A D+
Sbjct: 1030 GVNPFLIHPS---------SGALVTASPLDRENVPT-FILTVTASDQA 1067
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++P F YQ++++E+ +GT+V+ L A D D G+N ++ Y + + G FTID
Sbjct: 1403 HSPAFPMLHYQSSIREDAEVGTVVLVLSAVDRD-EGLNGQVEYFLM-EEVSGAFTID 1457
Score = 36.6 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N PVF+ Y ++ P GT +I + A+D D G+ ++Y + GD FTID+
Sbjct: 101 NYPVFTPSTYVTSISGQTPPGTEIINVLASDRD-SGIYGTVAYELIPGDQSSLFTIDS 157
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N PVF+ YQA V E P G LV+TL A D + G ISY +
Sbjct: 1917 NPPVFTQDFYQAAVPELTPGGYLVLTLSATDLESSG---DISYRI 1958
>gi|242024810|ref|XP_002432819.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212518328|gb|EEB20081.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 1972
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 60/106 (56%), Gaps = 8/106 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
N PVF++ +Y V EN +GT +IT++A D D G++ ++SY V + +G+F I+++
Sbjct: 1190 NPPVFNEKIYSTVVPENVDVGTNIITVQATDLD-LGLSGQVSYQIVDETEAVGFFKINSD 1248
Query: 61 GPLNHFRIVPTKIDPGTKKKE-YNIVVLKLLDREIAPLGYNLTLRA 105
IV KI G + E YNIVV + D+ LGY +L +
Sbjct: 1249 TG----EIVTDKILTGKGRAEPYNIVV-RASDKGDHVLGYQKSLSS 1289
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 15/111 (13%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
APVF + Y +TV EN GT+++ + A D D G + +R D LGYF ++ P
Sbjct: 258 APVFINSPYSSTVLENTKEGTVILRVGARDGD-IGDPRTVRIEIR-DDHLGYFQLE---P 312
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKL-LDR---EIAPLG--YNLTLRAVD 107
L + D + + Y++V ++ LDR EI G Y TLRA +
Sbjct: 313 LYDY----DDADENSFESYYDVVTTEIPLDRENPEILQNGGIYTFTLRATE 359
>gi|47209298|emb|CAF94673.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3417
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAPV S VY+A ++EN P GT+V T+KA DAD G+N ++SYS+
Sbjct: 2901 NAPVCSQPVYRAEIRENSPGGTVVTTVKATDAD-TGLNGEVSYSI 2944
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
NAPVF+ VY+ATV EN P T V T+ A+DAD G NS I YS R F ID
Sbjct: 1787 NAPVFNQSVYKATVMENSPADTYVTTVNASDAD-SGANSVIKYSFSDRSHGSGNLFMIDE 1845
Query: 60 EG 61
+
Sbjct: 1846 KS 1847
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 16/91 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTID 58
N P F+ Y A++ ENQP+GT V+ +KA D D G N+KI Y + + + TI+
Sbjct: 419 NPPTFAQKEYDASILENQPVGTFVMNIKAVDLD-GGSNAKILYHLSMDSNSETSSFLTIN 477
Query: 59 NE-GPLN-----------HFRIVPTKIDPGT 77
+E G L HF++ T D G+
Sbjct: 478 SETGALYTSRLFDYEQSVHFQMKVTAYDGGS 508
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGL-GYFTID 58
N PVFS VY+A V EN GT++ L A D D G+ +ISYS R + + G F ID
Sbjct: 209 NVPVFSQRVYKAFVMENSDTGTVITRLNATDLD-EGVYGEISYSFSRLSEKMGGVFEID 266
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR--GGDGLGYFTID 58
N PVF+ +Y+++V EN GT V+T+ A DAD G I+YS+ G FTID
Sbjct: 907 NIPVFNQDIYKSSVIENTSKGTSVMTVSATDAD-SGSYGLITYSLSKMKGGAAEIFTID 964
Score = 38.5 bits (88), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
NAPVF VY A V EN G V+TL+A D D N++ISY + D
Sbjct: 1997 NAPVFPQAVYSAYVVENNSPGVSVLTLRAKDPD-ENQNARISYILEDTD 2044
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 22/116 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PV + + +T+ E+ P GT + D D N +I S+
Sbjct: 1012 NPPVINLMSFSSTMSEDAPPGTTIAVFNVKDID-SDKNGQIKCSLN-------------- 1056
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
R +P KI+ + Y+++ + DRE P YN+T+ A D G+PP K
Sbjct: 1057 -----RKLPFKIE-SSLTNYYSLISDQYFDRESVP-EYNITVTATDSGSPPLSASK 1105
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 14/123 (11%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY-----SVRGGDGLGYFT 56
NAP+F Y A + EN G + L A D+D N++ISY V G Y +
Sbjct: 1117 NAPIFERQRYSAYITENNSPGASIFALTARDSD-WNQNARISYILEETQVSGSPISSYLS 1175
Query: 57 IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV---DKGTPPR 113
+++E + I + + KE IVV K D PL N+++R + PP+
Sbjct: 1176 LNSESGV----ISAARSFDYEQIKELQIVV-KAQDGGSPPLSSNVSVRILIQDQNDNPPQ 1230
Query: 114 ETY 116
Y
Sbjct: 1231 VLY 1233
>gi|348552360|ref|XP_003461996.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Cavia
porcellus]
Length = 3172
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 41/113 (36%), Positives = 59/113 (52%), Gaps = 9/113 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
NAP+F +QATV EN P+G V+ ++A DAD G N+++SY + G +G +
Sbjct: 725 NAPIFVSSPFQATVLENVPLGHSVLHIQAVDAD-SGENARLSYRLVDTGSAAVGVGSAGP 783
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
E P + P +I + I V LDRE A Y+ + AVD G+PP
Sbjct: 784 EDP-DSTPDFPFQIHNSSGW----ITVCAELDRE-AVEHYSFGVEAVDHGSPP 830
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 24/110 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF Y +V E++P+GT + T+ A D D G N++I+Y + E P+
Sbjct: 951 PVFQSSHYTVSVSEDRPVGTPIATISATDED-TGENARITYVL-------------EDPV 996
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
FRI P D GT I + LD E Y L + A D G P +
Sbjct: 997 PQFRIDP---DTGT------IYTMTELDYE-DQAAYTLAITARDNGIPQK 1036
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++PVF Y+ V+EN +G V+T++A D D P N+ + Y + G G G F ID
Sbjct: 513 HSPVFEQSEYRERVRENLEVGYEVLTIRATDGDAPS-NANMRYRLLEGSG-GVFEIDARS 570
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
+ R V + ++ EY ++V
Sbjct: 571 GVVRTRAVVDR----EEQAEYQLLV 591
Score = 39.3 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N PVF+ +Y+ + E+ +G+ V+TL+A D D NS I+Y + GG+ F + ++
Sbjct: 847 NDPVFTQPLYELRLNEDAAVGSSVLTLRARDRDA---NSVITYQLTGGNTRNRFALSSQ 902
Score = 37.4 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 47/113 (41%), Gaps = 25/113 (22%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG---GDGLGYFTIDNE 60
P F YQ +V ENQP GT VI L A D D G ++SY + GYF ID
Sbjct: 407 PQFPLPSYQVSVPENQPAGTTVIELVAHDPD-EGEAGRLSYQMEALFDERSNGYFLIDGA 465
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
GT + + LDRE + L + AVD G+P R
Sbjct: 466 --------------TGT------VSTARELDRETKDT-HVLKVSAVDHGSPRR 497
>gi|345485230|ref|XP_003425221.1| PREDICTED: LOW QUALITY PROTEIN: protein dachsous-like [Nasonia
vitripennis]
Length = 3357
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 53/110 (48%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F+ Y ATV E G V+ L A+D D G+NS++ Y + G+
Sbjct: 2202 NAPIFTQSQYSATVLEGNAKGDFVVKLSASDMD-QGLNSRLLYHIVDGN----------- 2249
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P N F I P P + NIV LDREI Y LT+ A D+G P
Sbjct: 2250 PDNAFTINP----PYSGIVRTNIV----LDREIRE-KYRLTIIATDQGNP 2290
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P+F Y A+V EN +GT V+ + A+DAD G N +I YS+ R D F ID
Sbjct: 221 NPPIFKQSRYVASVPENATVGTAVLKVDASDAD-AGENGRIEYSINRRQSDREEMFRIDP 279
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPL 97
E + + V +D +K++ ++V + DR PL
Sbjct: 280 ETGMVY---VNKALDFESKERHELVIVAR--DRGAQPL 312
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 25/108 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTIDNEGPLNHFRIVP 70
+V+E QP GT V ++A D D G N+ ++Y++ R DG F ID P++ ++
Sbjct: 1201 SVREEQPPGTEVARVRALDND-LGENASVTYTILKDRDSDGYNVFAID---PISG--MIK 1254
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
TK V L DR + Y L+++A D G P R + +A
Sbjct: 1255 TK------------VALDHEDRNV----YRLSVKASDAGRPARHSVRA 1286
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 21/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGM-NSKISYSVRGGDGLGYFTIDNE 60
N P F + ++Q ++KE+ P+G V L+A D D G + I Y + G+ F +D
Sbjct: 2609 NYPRFLEELHQVSIKEDAPLGHTVAVLRAKDEDLAGSPAASIVYDITSGNDAALFRVD-- 2666
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ ++V LD ++ P Y L + A D P
Sbjct: 2667 ------------------ESSGAVLVNASLDCDLGPEVYQLVVMACDSEPP 2699
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 3 APV--FSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
APV F + Y V+EN GT VI + A +D G +++YS+ G+ L F ID E
Sbjct: 2056 APVLKFQNDSYDIVVQENSAAGTEVIQVTAVRSD--GRRQQVTYSIGSGNDLQIFGIDEE 2113
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 22/99 (22%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG-LGYFTIDNEGPLNHFRIVPTKI 73
+ E+ G V + +D D S + ++RGG+G G T DN I+
Sbjct: 345 ISESAQPGEFVARISVSDPDSRAEYSNATVTLRGGEGHFGLATRDN--------II---- 392
Query: 74 DPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
Y +VV + LDRE P Y L++ A D GTPP
Sbjct: 393 --------YLVVVERPLDREERP-HYELSVEATDAGTPP 422
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 48/112 (42%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F +Y + EN P G LV T+ A+D D G N+ + Y+V +
Sbjct: 1085 NEPRFEKDLYAFELLENLPSGMLVGTVSASDTD-LGKNALLRYAVVQANS---------- 1133
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+DP T + I + LDRE + + L L A D+GTP R
Sbjct: 1134 --------SFAVDPDTGE----ITTREPLDRESKAV-HELVLEARDQGTPSR 1172
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 45/104 (43%), Gaps = 24/104 (23%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
Y V ENQ +V TL A DAD G N +ISYS+ G+ F +D V
Sbjct: 1724 YTLAVPENQE-NAVVHTLAATDADE-GKNGEISYSIISGNIGSKFKLD---------AVT 1772
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+ G+ LDRE P Y LT+ A DKG P E
Sbjct: 1773 GVLSAGS------------LDREAVP-KYVLTVSAKDKGRPSLE 1803
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 49/112 (43%), Gaps = 27/112 (24%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
NAP F Y+A + E GT VI + A DAD G N+++ YS+ +F ID +
Sbjct: 439 NAPRFLRDSYEAHLLEASEPGTSVIRVSAEDAD-EGPNARVRYSLLNS---TWFAIDEDT 494
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G ++ V + DP APL LT+ A D G PP
Sbjct: 495 GLISTAAHVDCEADP-------------------APL---LTVLATDSGKPP 524
>gi|47216563|emb|CAG04741.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1641
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 49/101 (48%), Gaps = 21/101 (20%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
V E QP G V TLKA+D D G+N K+ YS+ GGD P N F I P + +
Sbjct: 180 VSEGQP-GPRVWTLKASDEDS-GLNGKVEYSITGGD-----------PQNEFMISPVEGE 226
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+K LDRE YN+T+ A D GTP R +
Sbjct: 227 LRVRKDVE-------LDRETTAF-YNITVTARDLGTPSRNS 259
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 50/110 (45%), Gaps = 27/110 (24%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NEGP 62
P F++ Y +V EN+P GT VIT+ A D D G N + Y + G FT+D N G
Sbjct: 826 PRFTERTYNTSVFENEPSGTSVITVSATDLD-EGENGAVLYRMLGPQSEA-FTLDPNTGL 883
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ R+ L+ +R +NLT+ A D+G PP
Sbjct: 884 VRSRRL------------------LQSSER------FNLTVVATDQGRPP 909
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 53/131 (40%), Gaps = 26/131 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG---------- 51
N PVFS Y + EN P G +V L A DAD G N + Y + G
Sbjct: 491 NPPVFSPSSYSVRLPENSPTGVVVTQLSATDAD-SGSNGWLMYRLESGAQDRFLVEPLSG 549
Query: 52 ---LGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLD-------REIAPLGYNL 101
+G T+D E +R+V D GT + +LD R I P +
Sbjct: 550 AVLVGNITLDRE-ERGSYRLVVIATDRGTPPMSGTATLTVILDDVNDSRPRFIEP----V 604
Query: 102 TLRAVDKGTPP 112
T+ V++ TPP
Sbjct: 605 TMINVNESTPP 615
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 17/107 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PV + Y +V E PI T V ++A DAD G N+ ++Y++ G+ G F I++
Sbjct: 273 NDPVILNLPYNTSVSEGAPIHTSVARVQAQDAD-SGRNALLTYNITAGNLGGAFYINDTS 331
Query: 62 -------PLNHFRI------VPTKIDPGTK---KKEYNIVVLKLLDR 92
PL+ R+ + K +P +++ +++V+ +LD
Sbjct: 332 GVVLVNRPLDRERVAEYTLTITVKDNPENSRIARRDSDLLVITILDE 378
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG 51
N PVF YQ V EN +GT ++ + A DAD G+ + I YS+ G+G
Sbjct: 717 NNPVFLQPSYQEPVFENVALGTTIVRVSATDAD-SGLFAAIEYSLVDGEG 765
>gi|432913586|ref|XP_004078982.1| PREDICTED: cadherin-7-like [Oryzias latipes]
Length = 803
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
NAPVF D Y A V E+ P+GT V+T+ A DAD P G ++++ YS+ G+ YF+++
Sbjct: 178 NAPVFLDGPYSAQVDESSPVGTSVLTVVATDADDPTYGNSARVVYSILQGE--PYFSVE 234
Score = 38.9 bits (89), Expect = 0.77, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N P F +YQ TV E+ I ++V +KA D D G N+++ Y + GD LG F I
Sbjct: 287 NPPRFPLKIYQFTVPESALILSVVAKIKAVDLD-LGRNAEMDYKILDGDELGTFGI 341
>gi|432879572|ref|XP_004073493.1| PREDICTED: protocadherin alpha-2-like [Oryzias latipes]
Length = 797
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 19/111 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y+ T+ EN +GT V+T+ A DAD G+N I Y + D +
Sbjct: 236 NFPIFTKTLYKTTISENPSVGTTVLTVTATDAD-EGINKDIVYLLNAK--------DQDH 286
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L F I P K G+ I + ++D E +P + + ++A DKG PP
Sbjct: 287 VLETFEIDPEK---GS------ITMKGVVDFETSP-AFEIRVQATDKGQPP 327
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 22/118 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP + +VKE+ GT + + D D G N +++ +
Sbjct: 344 NAPEITVTALLTSVKEDAETGTAIALVSVLDKDG-GKNGEVTCEIMNS------------ 390
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
VP K++ K Y+++V LDRE+ P YN+T++A DKG P T +T
Sbjct: 391 -------VPFKLETNYKNY-YSLIVDGHLDRELIP-NYNITMKATDKGRPSLFTTAST 439
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 17/111 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS+ V VKEN T + + A D D N++ISYS+ + +
Sbjct: 449 NAPLFSEVVINLYVKENSKERTALRRISAVDVD-ENENARISYSLVNDN-------NKHA 500
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PL+ R++ + G I+ L+ D E + ++A D G PP
Sbjct: 501 PLS--RMININSETG------EIISLQSFDYEELK-TFQFKVQATDSGVPP 542
>gi|348514361|ref|XP_003444709.1| PREDICTED: protocadherin alpha-1-like [Oreochromis niloticus]
Length = 593
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 19/115 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVFS +Y+A V EN T ++T+ A D D G+NS+I YS + N
Sbjct: 226 NSPVFSQTLYKAQVSENAQFQTSIVTVSATDLD-EGINSEIVYS--------FIKRGNFK 276
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
P F I+PGT + I V+ +D E Y++ ++A DKG P + T+
Sbjct: 277 PEALF-----SINPGTGE----ITVVGEVDYE-ENTAYDIRIQARDKGAPSQSTH 321
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 51/119 (42%), Gaps = 22/119 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP + + VKE+ IGT+V + D D G N S + G
Sbjct: 334 NAPEITVTSLMSPVKEDAEIGTVVALVTVTDKDG-GSNGLTSAKLLG------------- 379
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
+VP K++ K Y++ V LDRE + YN+T+ A D+GTPP P
Sbjct: 380 ------VVPFKLNVNYKNY-YSLTVDGPLDRE-SISQYNVTMIATDEGTPPLSISSVIP 430
>gi|53748795|dbj|BAD52312.1| cadherin-related neuronal receptor variable 8 [Danio rerio]
Length = 928
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG---LGYFTID 58
N PVFS +Y+ + EN +GT VIT++A+DAD G+N +I YS DG + FTID
Sbjct: 224 NIPVFSTSLYKTRIMENAAVGTSVITVQASDAD-EGLNGEIIYSFISHDGDNRVNAFTID 282
Query: 59 N 59
+
Sbjct: 283 S 283
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 53/113 (46%), Gaps = 26/113 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLV--ITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P S TV+E+ GT+V IT+K DA G N + ++RG
Sbjct: 332 NIPEISVTSLAETVREDAAAGTMVGLITVKDGDA---GKNGAVVLNIRGS---------- 378
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P FRI T K +Y ++V LDRE A YN+T+ A D+GTPP
Sbjct: 379 -AP---FRI------QNTYKNKYYLLVDGQLDRETAS-EYNVTISAADEGTPP 420
>gi|326673375|ref|XP_003199864.1| PREDICTED: protocadherin alpha-8-like [Danio rerio]
Length = 801
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 56/112 (50%), Gaps = 19/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y+A + EN P+G VIT+ A DAD G+N +I YS + N+
Sbjct: 235 NIPVFTKSLYKARIPENAPVGYSVITVNAKDAD-AGLNGEIVYS--------FIKHVNDK 285
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ F I K+ I VL LD E + + + ++A DKG+ PR
Sbjct: 286 NIETFTI---------NKETGKITVLGKLDHE-SNNAFEIRVQARDKGSTPR 327
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 49/112 (43%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F Q V E IG A DAD G+NS SY + + +F++D +
Sbjct: 126 NSPTFHFSTLQLNVSEAAFIGERYALPSADDADV-GINSVKSYKLSASE---HFSLDVQS 181
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
G + +V+ K LDRE P+ LTL AVD G PPR
Sbjct: 182 G-------------GEQSVSAELVLQKALDREKQPV-IRLTLTAVDGGKPPR 219
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 48/111 (43%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P S VKE P GT+V + D D G N + + D L F + N
Sbjct: 343 NIPEISVTSISNVVKEGSPKGTMVGLITVKD-DDSGENGSVKLKIL--DSLP-FVLQN-- 396
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
T K +Y+++V LDRE A YN+T+ A D+GTPP
Sbjct: 397 ---------------TYKNKYSLIVDGPLDRERAS-EYNVTISAADEGTPP 431
>gi|307184762|gb|EFN71076.1| Protein dachsous [Camponotus floridanus]
Length = 2212
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 52/110 (47%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ Y ATV E G V+ L A DAD G+NS+I Y + G+
Sbjct: 1067 NPPIFTQTQYSATVLEGNTKGDFVVKLSADDAD-QGLNSRILYHIVDGN----------- 1114
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P N F I P P + NIV LDRE+ Y LT+ A D+G P
Sbjct: 1115 PDNAFTISP----PHSGIVRTNIV----LDREVRE-KYRLTIIATDQGNP 1155
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 25/108 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTIDNEGPLNHFRIVP 70
+V+E QP GT V ++A D D G N+ ++YS+ R DG FTID P+ ++
Sbjct: 75 SVREEQPPGTEVAKVRALDMD-LGENASVTYSILKDRDSDGYNVFTID---PITG--MIR 128
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
TK VL +R + Y ++++A D G PR + +A
Sbjct: 129 TK------------AVLDHEERNV----YRVSVKATDAGHLPRHSIRA 160
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD-PPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F YQ ++KE+ P GT V+ L+A D D + + Y + G+ G F ++
Sbjct: 1474 NYPYFLKEFYQVSIKEDAPRGTTVVVLRAKDDDLIDSAAATLMYDITSGNDGGLFRVER- 1532
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLR 104
+ +V + +D + + +N+VV+ I P LR
Sbjct: 1533 --MTGAVLVNSTLDCDLEAEVHNLVVMACDSDPILPFCALAILR 1574
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F Y V EN+PIGT+V + +A+D D G+ ++YS+ G+ ID+
Sbjct: 1583 NSPKFPVSEYLQFVGENEPIGTIVFSSRASDLD-RGIFGSLNYSIVSAAASGFSDIDDSW 1641
Query: 62 PL 63
L
Sbjct: 1642 KL 1643
>gi|51260887|gb|AAH79605.1| Pcdh20 protein, partial [Mus musculus]
Length = 944
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + + T++EN + L A DAD G ++SY + G D YF++D+
Sbjct: 524 NAPVFLQPLIELTIEENNAPNAFLTKLYATDADS-GEMGRVSYFL-GPDAPSYFSLDS-- 579
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ V T++D K+K Y T+RAVD GTPPRE+
Sbjct: 580 -VTGILTVSTQLDREEKEK------------------YRYTVRAVDCGTPPRES 614
>gi|391334511|ref|XP_003741647.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog
[Metaseiulus occidentalis]
Length = 4558
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTL-VITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+AP F+D V QA+V EN P G D D ++ I+YS+ GDGLG F+ID++
Sbjct: 1049 HAPKFADVVVQASVDENLPPGAFVTTVTATDDDDSTKLDGMITYSIIDGDGLGLFSIDDK 1108
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNL 101
G + ++ + K Y +V+ DR PL L
Sbjct: 1109 GTIRSRSVL------DCENKPYYWLVVSATDRAAVPLSSRL 1143
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++P F+ F Y+A V EN T +IT+ AAD D G ++ YS++ + YFT+D
Sbjct: 2524 HSPKFTHFEYEAIVPENSSASTYIITVSAADQD-RGQYGRVKYSIQSEEMTHYFTLD 2579
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP F Y ++E+ IGT+++ + A D D G+N K+SYS+ G GYF I +
Sbjct: 3144 APQFLKDNYTVAIQEDAEIGTVLMKIYATDRD-VGINRKVSYSLMDSAG-GYFEIQSNTG 3201
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ I ++K LDRE Y L + A+D G P
Sbjct: 3202 I--------------------IQLMKTLDRESVD-SYRLAVEAIDHGQP 3229
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 23/112 (20%)
Query: 3 APVF-SDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
AP F D + +V E+ P+GT ++ L+A DAD G N +I Y + GD F +D
Sbjct: 732 APEFPKDTPVEISVNESVPVGTTLLPLRAKDAD-HGYNGRIVYVISSGDDDSCFKMD--- 787
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ N+++++ LDRE P Y LT+ A D G P +
Sbjct: 788 -----------------LYKGNLMLVEPLDRERTP-KYVLTITAYDLGEPKK 821
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y + ++E+ +G ++ ++A DAD G+N ++SY+V F ID +
Sbjct: 3349 NRPTFDKGRYNSVIREDTKVGERILQIQATDAD-SGVNGELSYAVVNASDYPEFAIDPQS 3407
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ +V+ K LDRE+ Y L + A D G P
Sbjct: 3408 GV--------------------VVLRKSLDRELQSDYYFLVV-AHDGGEP 3436
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F ++ V E+ +GT V+ A D D G N++ISYS+ G+ F I +
Sbjct: 1575 HAPEFLQSSFEGKVFESAALGTSVVQTTAVDKD-RGDNARISYSIVSGNVGSSFAIQPQ- 1632
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
GT I V K L +++ P Y L +RA D G+P
Sbjct: 1633 -------------LGT------ISVAKSLSQQLLP-EYYLVVRAADHGSP 1662
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
P+F +Y +V E P G+ ++T++A D D NS ISYSV D F ID++
Sbjct: 2301 PLFEQIMYNVSVSEVSPPGSSILTVRAHDKDS---NSVISYSVEDSD---RFIIDSK 2351
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 53/123 (43%), Gaps = 26/123 (21%)
Query: 2 NAPVFSDFVYQA-TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP F+ + T+ EN PIGT V+T+ A DAD + GY T
Sbjct: 459 NAPRFNQSIRSVVTIDENVPIGTKVVTVSATDAD--------------DEENGYVTF--- 501
Query: 61 GPLNHFRIVPTKIDP--GTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
L + +P KI+P G NI K+ + Y L +RA D GTP + +
Sbjct: 502 -ALANTNKIPFKINPFTGVVSTTDNIDYEKM-----SSSFYLLRIRATDWGTPFQRQTEM 555
Query: 119 TPR 121
T R
Sbjct: 556 TVR 558
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 22/108 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ Y A V+E+ P G++++T+ A D D K+SY + + F ID+E +
Sbjct: 943 PRFTLKNYIARVREDLPKGSVIMTMAAQDPDLDDA-GKVSYQLMSKELRNLFEIDSETGI 1001
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ ++ LD E L YN+T+RA D G P
Sbjct: 1002 --------------------VRLIGELDFETNQL-YNVTIRASDSGEP 1028
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 45/111 (40%), Gaps = 20/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+ Y+ TV E+ V+ L+A D D I++ + GD G+F ID
Sbjct: 1155 NAPLSKLPYYKGTVLEDSAANVSVLGLEAFDNDHTANMDNITFRITAGDPQGHFHIDTYS 1214
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
RI T + LDREI + L + D GTPP
Sbjct: 1215 G----RITTTD---------------RRLDREIQD-KFLLDVTITDDGTPP 1245
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS +Y V E+ P+ T + TL+ D D P + Y + GD +F + + G
Sbjct: 2938 NPPTFSRDLYDVEVDEDAPVNTEIFTLEIQDPDDPKSQTMYFY-LTSGDDRNHFGLSDTG 2996
Query: 62 PL 63
L
Sbjct: 2997 VL 2998
>gi|328790020|ref|XP_392300.4| PREDICTED: protein dachsous-like [Apis mellifera]
Length = 3415
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 52/110 (47%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ Y ATV E G V+ L A+DAD GMN +I Y + G+
Sbjct: 2263 NPPIFTQTQYSATVLEGNVKGDFVVKLSASDAD-QGMNGRILYHIVDGN----------- 2310
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P N F I P P + NIV LDREI Y LT+ A D+G P
Sbjct: 2311 PDNAFTISP----PYSGIVRTNIV----LDREIRE-KYRLTIIATDQGNP 2351
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P+F+ Y A+V EN +GT V+ + A D+D G N +I YS+ R D F ID
Sbjct: 218 NPPIFNQTRYVASVPENATVGTPVLAVNATDSD-AGENGRIEYSINRRQSDREEMFRIDP 276
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYN--LTLRAVD 107
E + + V +D +K++ ++V + DR PL + L++R D
Sbjct: 277 ETGMVY---VNKALDFESKERHELVIVAR--DRGAQPLEASAFLSVRVTD 321
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 25/108 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTIDNEGPLNHFRIVP 70
+V+E QP GT V ++A D D G N+ ++Y++ R DG FTID P+ ++
Sbjct: 1250 SVREEQPPGTEVARVRALDTDL-GENASVTYTILKDRDSDGYNVFTID---PITG--MIR 1303
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
TK VL +R + Y ++++A D G PPR + +A
Sbjct: 1304 TK------------AVLDHEERNV----YRVSVKATDAGRPPRHSIRA 1335
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 52/125 (41%), Gaps = 28/125 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPG-MNSKISYSVRGGDGLGYFTIDNE 60
N P FS+ V+Q ++KEN G V L+A D D G + + Y + G+ G F +D
Sbjct: 2672 NYPRFSEDVHQVSIKENAARGATVAVLRAKDDDLAGTAAANLVYEITSGNDGGLFRVD-- 2729
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
+ ++V LD ++ P +NL + A D T ATP
Sbjct: 2730 ------------------RATGAVLVNATLDCDLEPDVHNLVVMACD-------TDPATP 2764
Query: 121 RNGLT 125
LT
Sbjct: 2765 LCALT 2769
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 13/108 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F Y V EN+P+GT V + +A+D D G+ ++YS+ G+ ID+
Sbjct: 2781 NSPKFPVPEYLEFVGENEPVGTTVFSARASDLD-RGIFGALNYSIVSAAATGFSDIDDS- 2838
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+R+ GT + + D E+ Y TLRA D G
Sbjct: 2839 ----WRLFAVDGKSGT------VTTRAVFDYELRNR-YAFTLRATDTG 2875
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y + EN P GTLV ++ A+D D G N+ + Y+V + FT
Sbjct: 1134 NDPRFEKEFYGFELLENLPSGTLVGSVSASDPD-LGKNALLRYAVVQAN--SSFT----- 1185
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+DP T + I+ + LDRE + + L L A D+GTP R
Sbjct: 1186 -----------VDPDTGE----IITKEPLDRETKGV-HELVLEARDQGTPSR 1221
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 50/115 (43%), Gaps = 27/115 (23%)
Query: 2 NAPVFS-DFVYQATVKENQPIGTLVI-TLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N+P F Y V ENQ GT VI T+ AAD D G N +I YS+ GG+ F +D
Sbjct: 1762 NSPEFRPGSCYTLAVPENQ--GTAVIHTIAAADLDE-GKNGEIYYSIVGGNIGAKFALD- 1817
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
PT + + LDRE Y LT+ A DKG P E
Sbjct: 1818 ----------PTS----------GALSMSNLDRESVS-KYALTISAKDKGRPSLE 1851
>gi|57528953|ref|NP_001009595.1| protocadherin 2 alpha b 8 precursor [Danio rerio]
gi|53748816|dbj|BAD52325.1| cadherin-related neuronal receptor variable 8 [Danio rerio]
Length = 937
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG---LGYFTID 58
N PVFS +Y+ + EN +GT VIT++A+DAD G+N +I YS DG + FTID
Sbjct: 233 NIPVFSTSLYKTRIMENAAVGTSVITVQASDAD-EGLNGEIIYSFISHDGDNRVNAFTID 291
Query: 59 N 59
+
Sbjct: 292 S 292
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 53/113 (46%), Gaps = 26/113 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLV--ITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P S TV+E+ GT+V IT+K DA G N + ++RG
Sbjct: 341 NIPEISVTSLAETVREDAAAGTMVGLITVKDGDA---GKNGAVVLNIRGS---------- 387
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P FRI T K +Y ++V LDRE A YN+T+ A D+GTPP
Sbjct: 388 -AP---FRI------QNTYKNKYYLLVDGQLDRETAS-EYNVTISAADEGTPP 429
>gi|260809723|ref|XP_002599654.1| hypothetical protein BRAFLDRAFT_205652 [Branchiostoma floridae]
gi|229284935|gb|EEN55666.1| hypothetical protein BRAFLDRAFT_205652 [Branchiostoma floridae]
Length = 417
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN-E 60
N PVFS Y +V E+ +G V + A DAD G N+++SY++ GG+ F ++ +
Sbjct: 265 NFPVFSSDPYTVSVYEDIAVGATVADVTATDAD-SGTNAQVSYTIIGGNEENKFVVNQAD 323
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
GPL ++ LDRE + YN+TLRA D G+P
Sbjct: 324 GPL---------------------LLANSLDRE-SNDTYNITLRAYDGGSPS 353
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 50/111 (45%), Gaps = 23/111 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS VY ATV E+Q I + V+T+ DAD G N+ I+YS+ G+ G F I + G
Sbjct: 52 NYPTFSPTVYSATVPEDQAISSTVVTVAVTDAD-IGTNADIAYSITAGNLEGKFGIQSNG 110
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ + L+ E Y LT+ A D G PP
Sbjct: 111 A---------------------VTLADTLNYE-NTTQYTLTITATDDGYPP 139
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y ++E+ + + L+A DAD G N+ ++YS+ GD LG F+I G
Sbjct: 161 NTPVFNPDNYIINIEEDVAVNSAFYMLRANDADS-GTNADLTYSITSGDALGQFSIATNG 219
Query: 62 PL 63
+
Sbjct: 220 EV 221
>gi|119514219|gb|ABL75882.1| protocadherin 2G7 [Takifugu rubripes]
Length = 940
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 75/201 (37%), Gaps = 87/201 (43%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS---------------- 45
NAPVF VY+A + EN +GT+V+T+ A+DAD G+N +++Y
Sbjct: 232 NAPVFEQAVYKADLPENAALGTVVLTVSASDAD-EGVNGEVTYEFSRISDKAKKVFTLNS 290
Query: 46 ----------------------VRGGDGLGYFT----------IDNEGPLNHFRI----V 69
+ DG G T +++ P+ H + V
Sbjct: 291 KTGEIKVSGPLDFESNPNYEMRINANDGFGLSTDSKLMIKITDVNDNAPVIHVKSLIDPV 350
Query: 70 PTKIDPGTK---------------------------------KKEYNIVVLKLLDREIAP 96
P + PG++ K Y++V LDRE+
Sbjct: 351 PEDVSPGSEVGIINVQDRDSENNRQVRCSIQQNVPFKLVPSIKNYYSLVTTGQLDRELVS 410
Query: 97 LGYNLTLRAVDKGTPPRETYK 117
YN+T+ A D+G+PP + K
Sbjct: 411 -DYNITISATDEGSPPLSSSK 430
>gi|156368055|ref|XP_001627512.1| predicted protein [Nematostella vectensis]
gi|156214424|gb|EDO35412.1| predicted protein [Nematostella vectensis]
Length = 1677
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F+ Y A + E G+ V+ L A D D G N +SYS+ GG+ LG+F +D +
Sbjct: 421 NSPAFTSNAYTANISELAQNGSYVLQLNATDPDE-GDNGTVSYSITGGNDLGWFQVDFQS 479
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
L + K LDRE +T+ A D G+ P+
Sbjct: 480 GL--------------------VTTAKPLDREQVS-SVTITITAQDHGSAPK 510
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 66/142 (46%), Gaps = 22/142 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
NAPVF Y A++ EN+P G L + + A DAD G N+ ISY + GG+ G F+ID+
Sbjct: 633 NAPVFYPVEYFASIMENEPPGKL-LQVTATDAD-EGTNAVISYDIIGGNNNGNFSIDSST 690
Query: 61 ------GPLNH-----FRIVPTKIDPGTKKKE----YNIVVLKLLDREIAPL--GYNLTL 103
L+H F ++ + D G K N+ VL D L YN T+
Sbjct: 691 GVISTLASLDHEVEEFFSLIISAKDGGNKYAAKTAVVNVTVLNKADNLPVFLYEMYNFTV 750
Query: 104 -RAVDKGTPPRETYKATP-RNG 123
V KGT Y T +NG
Sbjct: 751 YENVPKGTLVGRVYATTKDKNG 772
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 47/106 (44%), Gaps = 22/106 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS VY TV E G+ V +KA DAD G N+K YS+ G G+ F I++
Sbjct: 1155 NAPVFSRAVYAITVSELSLPGSPVFRIKAMDAD-EGDNAKFFYSLVSGTGMDKFFINSST 1213
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
H K LDRE YNL ++A D
Sbjct: 1214 GELHLS--------------------KTLDRETTS-SYNLVVKATD 1238
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 48/109 (44%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF + Y + E+ IG+LVI L A+D D G N I YS+ G+ F
Sbjct: 1262 PVFPESDYTVNITEDALIGSLVINLNASDKD-IGQNGLIKYSISNGNLAAMF-------- 1312
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
++ T + ++V K LD E L Y LT+ A D G P
Sbjct: 1313 --------DVESATGR----LIVAKSLDFETTQL-YELTITAQDHGLIP 1348
Score = 38.9 bits (89), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 42/104 (40%), Gaps = 21/104 (20%)
Query: 12 QATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPT 71
+A EN I T + + D D NS+ + GD G F ++ G
Sbjct: 325 KAIRSENSLINTNIAYILVTDKDS-NTNSQTELKITNGDDEGCFKVEFLGF--------- 374
Query: 72 KIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
Y I + K LDRE+ P YNLTL DKG P R T
Sbjct: 375 ----------YFIQLQKPLDRELVPF-YNLTLNVTDKGVPSRST 407
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 48/116 (41%), Gaps = 21/116 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P FS YQ +V EN+ GT V+T+ AA +N I Y Y T D+
Sbjct: 1574 PTFSSADYQGSVTENKVAGTSVVTVLAA-YPQSSLNGNIEY---------YLTSDSSK-- 1621
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
F +V + G K I DRE +NL + AVDK P T AT
Sbjct: 1622 GGFEVVKST---GVVKTTRGI------DREGMGASFNLVVYAVDKQGPSARTSSAT 1668
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF +Y TV EN P GTLV + A D N ISY++ GD F +D+ G
Sbjct: 737 NLPVFLYEMYNFTVYENVPKGTLVGRVYATTKDK---NGSISYAIVSGDPTNLFLVDSTG 793
Query: 62 PL 63
+
Sbjct: 794 GI 795
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 47/113 (41%), Gaps = 26/113 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL--GYFTIDN 59
N P F Y+ T+ E IG V+ + A D D G N +I+Y + D G F ++
Sbjct: 526 NKPRFMKSSYKGTISEGASIGATVLQVSATDVD-SGDNGRITYEISSSDAQVNGLFELNT 584
Query: 60 E-GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ G L TK + LDRE L Y+ T+ A D G P
Sbjct: 585 QTGVL------------WTKSQ---------LDRETKSL-YSFTVLAKDHGDP 615
>gi|47207212|emb|CAF91491.1| unnamed protein product [Tetraodon nigroviridis]
Length = 767
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/45 (55%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAPVF+ Y++TV EN GT+V T+ A+DAD G NSKI+YS+
Sbjct: 210 NAPVFTQSTYKSTVVENSAKGTVVATVTASDAD-DGANSKITYSI 253
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVF YQA + EN G + T++A DAD N+++SY
Sbjct: 420 NAPVFERSSYQAYIVENNSPGLSIFTVRARDAD-WNQNARVSY 461
>gi|363729524|ref|XP_417264.3| PREDICTED: protocadherin-16 [Gallus gallus]
Length = 3258
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 11/114 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P+F Y A+V E+ GT V+TL A DAD N+ Y++ G+ F +++
Sbjct: 2435 HSPIFQVPHYNASVPEDLRPGTTVLTLDAGDADLSRENAGFDYTIVSGNSGNAFQVESR- 2493
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
G + + +V+++ LD E P+ YNLT+ A+D+G P R T
Sbjct: 2494 ---------VAWAGGQLRTQGALVLVEPLDFEAIPV-YNLTVAALDRGLPQRST 2537
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 18/108 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ++KEN P+GT + + A DAD G+ +SYS+ G G+G
Sbjct: 551 NEPVFRSNFYNVSLKENTPVGTCFLQVTATDAD-SGLFGSLSYSL--GSGIG-------- 599
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+VPT+ K ++ + LDR+ Y+ T+ AVD G
Sbjct: 600 -----SVVPTQFS--IDKHTGHLCTTQPLDRDEGTSAYDFTITAVDGG 640
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 45/139 (32%), Positives = 57/139 (41%), Gaps = 31/139 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
N PVF+ Y+ V E+ P GT ++ L A DAD G + YS+ GD G F I
Sbjct: 2551 NPPVFARAEYRTAVSESTPPGTELLRLTAHDAD-SGPRGHVHYSISSGDQHGLFQIHEST 2609
Query: 58 ---------DNEG-------------PLNHFRIVPTKI---DPGTKKKEYNIVVLKLLDR 92
D E P HF +VP I D K + + VL R
Sbjct: 2610 GALCLARPLDRETQASHALVVQATDVPGGHFALVPVAIEVKDVNDNKPYFPVEVLSASMR 2669
Query: 93 EIAPLGYNL-TLRAVDKGT 110
E P G + TLRA+D T
Sbjct: 2670 ENLPPGTLVTTLRAIDTDT 2688
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP F+ Y V E+ P+G+LV+ L+A D D G N +++Y + G + LG F I+
Sbjct: 1814 NAPGFAQASYVVEVPEDLPVGSLVLQLEAEDPD-EGTNGQVTYYL-GNESLGMFQIE 1868
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF +V E++P G + + + A D D G N ++SYS+R G+G G F
Sbjct: 1504 NAPVFLSPA-AVSVTEDRPTGFVALHVVAQDNDL-GENGRVSYSLRAGNGDGRF------ 1555
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
++P T + V++ L+RE + +NLT+ A D G P R
Sbjct: 1556 ----------HLNPSTGA----LSVVRALNRE-EVVQHNLTVVAADHGFPRR 1592
Score = 39.7 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVF Y TV E+ G V ++A + PPG I YS+ GD GYF+ID++
Sbjct: 762 VSPPVFEQAQYFFTVPEDMLQGASVGAVRAQN--PPGHTDDIFYSISSGDPHGYFSIDSD 819
Query: 61 G-------PLNH 65
PL+H
Sbjct: 820 TGQLHTSLPLDH 831
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAP FS YQ T+ E+ P G++++T+ A D D G N I++
Sbjct: 2331 NAPAFSQPFYQVTLPEHTPAGSILLTMSATDMD-SGSNGDITF 2372
Score = 35.8 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N P F V A+++EN P GTLV TL+A D D G+ ++ Y+V
Sbjct: 2655 NKPYFPVEVLSASMRENLPPGTLVTTLRAIDTD-TGVFGELQYAV 2698
>gi|260763990|ref|NP_848800.3| protocadherin-20 precursor [Mus musculus]
Length = 952
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + + T++EN + L A DAD G ++SY + G D YF++D+
Sbjct: 532 NAPVFLQPLIELTIEENNAPNAFLTKLYATDADS-GEMGRVSYFL-GPDAPSYFSLDS-- 587
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ V T++D K+K Y T+RAVD GTPPRE+
Sbjct: 588 -VTGILTVSTQLDREEKEK------------------YRYTVRAVDCGTPPRES 622
>gi|51316455|sp|Q8BIZ0.2|PCD20_MOUSE RecName: Full=Protocadherin-20; Flags: Precursor
Length = 925
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + + T++EN + L A DAD G ++SY + G D YF++D+
Sbjct: 505 NAPVFLQPLIELTIEENNAPNAFLTKLYATDADS-GEMGRVSYFL-GPDAPSYFSLDS-- 560
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ V T++D K+K Y T+RAVD GTPPRE+
Sbjct: 561 -VTGILTVSTQLDREEKEK------------------YRYTVRAVDCGTPPRES 595
>gi|26340694|dbj|BAC34009.1| unnamed protein product [Mus musculus]
Length = 925
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + + T++EN + L A DAD G ++SY + G D YF++D+
Sbjct: 505 NAPVFLQPLIELTIEENNAPNAFLTKLYATDADS-GEMGRVSYFL-GPDAPSYFSLDS-- 560
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ V T++D K+K Y T+RAVD GTPPRE+
Sbjct: 561 -VTGILTVSTQLDREEKEK------------------YRYTVRAVDCGTPPRES 595
>gi|74211169|dbj|BAE37663.1| unnamed protein product [Mus musculus]
Length = 865
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + + T++EN + L A DAD G ++SY + G D YF++D+
Sbjct: 532 NAPVFLQPLIELTIEENNAPNAFLTKLYATDADS-GEMGRVSYFL-GPDAPSYFSLDS-- 587
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ V T++D K+K Y T+RAVD GTPPRE+
Sbjct: 588 -VTGILTVSTQLDREEKEK------------------YRYTVRAVDCGTPPRES 622
>gi|380011903|ref|XP_003690033.1| PREDICTED: LOW QUALITY PROTEIN: protein dachsous-like, partial [Apis
florea]
Length = 2820
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 52/110 (47%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y ATV E G V+ L A+DAD GMN ++ Y + G+
Sbjct: 1679 NPPVFTQTQYSATVLEGNVKGDFVVKLSASDAD-QGMNGRVLYHIVDGN----------- 1726
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P N F I P P + NIV LDREI Y LT+ A D+G P
Sbjct: 1727 PDNAFTISP----PYSGIVRTNIV----LDREIRE-KYRLTIIATDQGNP 1767
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 25/108 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTIDNEGPLNHFRIVP 70
+V+E QP GT V ++A D D G N+ ++Y++ R DG FT+D P+ ++
Sbjct: 668 SVREEQPPGTEVARVRALDTDL-GENASVTYTILKDRDSDGYNVFTVD---PITG--MIR 721
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
TK VL +R + Y ++++A D G PPR + +A
Sbjct: 722 TK------------AVLDHEERNV----YRVSVKATDAGRPPRHSIRA 753
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 13/108 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F Y V EN+PIGT V + +A+D D G+ ++YS+ G+ ID+
Sbjct: 2196 NSPKFPVPEYLEFVGENEPIGTTVFSARASDLD-RGIFGSLNYSIVSAAATGFSDIDDS- 2253
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+R+ GT + + D E+ Y TLRA D G
Sbjct: 2254 ----WRLFAVDGKSGT------VTTRAVFDYELRNR-YAFTLRATDTG 2290
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGM-NSKISYSVRGGDGLGYFTID-N 59
N P F++ V+Q ++KEN G V L+A D D G + + Y + G+ G F +D +
Sbjct: 2087 NYPRFTEDVHQVSIKENAARGATVAVLRANDEDLAGTPAATLVYEITSGNDGGLFRVDRS 2146
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVL 87
G + +V +D + +N+VV+
Sbjct: 2147 TGAV----LVNATLDCDLEPDVHNLVVM 2170
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 3 APV--FSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
APV F + Y+ V EN GT VI + A +D G +++YS+ G+ L F ID E
Sbjct: 1532 APVLKFQNETYEVVVGENCAAGTEVIRVTAVRSD--GRRQRVTYSLGSGNELAAFAIDEE 1589
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y + EN P GTLV ++ A+D D G N+ + Y+V + FT
Sbjct: 552 NDPRFEKEFYGFELLENLPSGTLVGSVSASDPD-LGKNALLRYAVVQAN--SSFT----- 603
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+DP T + I+ + LDRE + + L L A D+GTP R
Sbjct: 604 -----------VDPDTGE----IITREPLDRETKGV-HELVLEARDQGTPSR 639
>gi|187956229|gb|AAI50666.1| Protocadherin 20 [Mus musculus]
Length = 952
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + + T++EN + L A DAD G ++SY + G D YF++D+
Sbjct: 532 NAPVFLQPLIELTIEENNAPNAFLTKLYATDADS-GEMGRVSYFL-GPDAPSYFSLDS-- 587
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ V T++D K+K Y T+RAVD GTPPRE+
Sbjct: 588 -VTGILTVSTQLDREEKEK------------------YRYTVRAVDCGTPPRES 622
>gi|332023167|gb|EGI63423.1| Cadherin-related tumor suppressor [Acromyrmex echinatior]
Length = 1862
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 51/102 (50%), Gaps = 22/102 (21%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
ATV EN ++V + D D G+N + S +R G+ LG HFR+ T+
Sbjct: 418 ATVDENTAKDSIVAAVAVID-DDEGLNGETSVEIRAGNELG-----------HFRLEVTE 465
Query: 73 IDPGTKKKEYNIV-VLKLLDREIAPLGYNLTLRAVDKGTPPR 113
++IV V LDRE P YNLT+ A DKGTPPR
Sbjct: 466 --------SFDIVRVDGRLDREEIP-KYNLTVVATDKGTPPR 498
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 22/118 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ V E IGT ++ + DAD G+N + YS+ G+ G+F ID
Sbjct: 1220 NVPQFQRLPYRVQVSEGAAIGTQLLRVYTTDAD-EGLNGDVFYSLEDGNQYGHFVID--- 1275
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I ++K LDRE++ Y LT+ A D G R + AT
Sbjct: 1276 -----------------EATGQISLMKELDREMSDT-YVLTVVAHDAGLETRLSSSAT 1315
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF Y A + E PIG+ V ++ A DAD G+N++I Y G+ +F ID++
Sbjct: 514 HEPVFQQSEYSAVLSEFAPIGSFVASISATDAD-SGLNARIYYEFGSGNEQNWFAIDSDT 572
Query: 62 PL 63
L
Sbjct: 573 GL 574
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF Y+ ++ E+ P+ +L A DAD G N +I Y + G+ G F I +G
Sbjct: 1007 HTPVFRLSSYETSLSESTPVNERFFSLTAQDAD-LGNNGRILYRITDGNAEGRFGIFPDG 1065
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
L V LDRE Y L + A D+G+P R +
Sbjct: 1066 QL---------------------YVKNELDREERDY-YALEVIASDQGSPSRSS 1097
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N PVFS Y + E+ P+GT V+T+ A D D NSK++Y + D FTID E
Sbjct: 287 NPPVFSQSDYVVALNESAPVGTKVLTVHATDKDSED-NSKLTYYL--PDNERKFTIDPE 342
>gi|148703793|gb|EDL35740.1| protocadherin 20 [Mus musculus]
Length = 925
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + + T++EN + L A DAD G ++SY + G D YF++D+
Sbjct: 505 NAPVFLQPLIELTIEENNAPNAFLTKLYATDADS-GEMGRVSYFL-GPDAPSYFSLDS-- 560
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ V T++D K+K Y T+RAVD GTPPRE+
Sbjct: 561 -VTGILTVSTQLDREEKEK------------------YRYTVRAVDCGTPPRES 595
>gi|26350253|dbj|BAC38766.1| unnamed protein product [Mus musculus]
Length = 952
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + + T++EN + L A DAD G ++SY + G D YF++D+
Sbjct: 532 NAPVFLQPLIELTIEENNAPNAFLTKLYATDADS-GEMGRVSYFL-GPDAPSYFSLDS-- 587
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ V T++D K+K Y T+RAVD GTPPRE+
Sbjct: 588 -VTGILTVSTQLDREEKEK------------------YRYTVRAVDCGTPPRES 622
>gi|395504722|ref|XP_003756696.1| PREDICTED: protocadherin alpha-2 [Sarcophilus harrisii]
Length = 805
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 42/111 (37%), Positives = 55/111 (49%), Gaps = 19/111 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F +Y+ + EN GTLVI L A+DAD G+NS+I+YS L T+ N+
Sbjct: 238 NEPEFDQTLYKVRLLENTTNGTLVIKLNASDAD-EGLNSEITYSFSSDVPL---TVHNK- 292
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
KIDP T + I + LD E Y + + A DKGTPP
Sbjct: 293 ---------FKIDPSTGE----IRIKGELDYE-EEKSYEIQIIAFDKGTPP 329
>gi|339258504|ref|XP_003369438.1| putative cadherin domain protein [Trichinella spiralis]
gi|316966323|gb|EFV50917.1| putative cadherin domain protein [Trichinella spiralis]
Length = 2240
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 13/108 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
NAPVFS Y +V E+ P+G++++ L A+D D G+NS + + + G+ F I+N
Sbjct: 1779 NAPVFSHPEYHISVNESMPVGSVIMKLSASDED-IGVNSLLHFEITSGNTESTFAIENST 1837
Query: 61 -----------GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPL 97
+NH++++ D G + + L+ RE+ L
Sbjct: 1838 GVIKLQKKLDNTKINHYKLILKVTDSGVPARSSLAMCYVLVMREMIGL 1885
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 24/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F Y+ +V+ENQP GT V + A DAD G+N + Y + + + F + +G
Sbjct: 448 NAPIFESAAYEFSVEENQPKGTFVGQVVAHDAD-FGLNGTVRYRL-DSEQVKIFHVSLDG 505
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
L + +LD E+ L Y L + A D G P T
Sbjct: 506 KL---------------------ITSGVLDYELTDL-YELQIIAYDGGIPSLST 537
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 52/118 (44%), Gaps = 24/118 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID--N 59
++P F +Y++ V EN P+ T + LKA D D G NS+I F ID
Sbjct: 337 HSPEFLQKIYRSAVYENAPLMTKIFQLKAIDLD-HGTNSQI-----------MFKIDPNQ 384
Query: 60 EGPLNH-FRIVPTKIDPGTKKKEYNIVVLKLLDREIAP-LGYNLTLRAVDKGTPPRET 115
E LN D G I V K LDRE+ P + +T+R D G P R +
Sbjct: 385 ETALNQTLEYFDVYADSGW------IYVRKTLDREMIPEFSFVVTVR--DNGEPKRSS 434
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAPVF + ATV G ++ + A DAD PG+NS + YS+
Sbjct: 1311 NAPVFIKQPFVATVSGKIAAGQRIVKITAKDADGPGLNSDLYYSI 1355
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY--SVRGGDGLGYFTIDN 59
NAP+F + +V E+ +G + T KA D D G+N +I Y SV + +
Sbjct: 231 NAPLFDQSYAEISVMEDHEVGIALYTAKATDRD-SGLNGQIRYRLSVNPENTFMIHPVSG 289
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVV 86
E LNH R + K+K Y +V+
Sbjct: 290 EIRLNHNRAFDYE-----KRKNYTLVI 311
>gi|328790298|ref|XP_394631.4| PREDICTED: fat-like cadherin-related tumor suppressor homolog [Apis
mellifera]
Length = 3599
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 56/112 (50%), Gaps = 27/112 (24%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP F+ Y AT+ E+ +GTLV + A D D G+N KI Y + DG
Sbjct: 2031 NAPKFTMQTYSATLPEDVEVGTLVTKVHATD-DDIGINRKIRYEFIDSADG--------- 2080
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVL-KLLDREIAPLGYNLTLRAVDKGTP 111
HF I D G IV L K LDRE + YN+T++A+D+GTP
Sbjct: 2081 ----HFLIA---TDSG-------IVTLGKPLDRETKAM-YNVTIQALDQGTP 2117
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 24/116 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS+ Y+A+++E+ IG VI + A D D N +SY + GD F+ID
Sbjct: 2240 NAPIFSEVSYRASIREDAKIGEKVIQVFANDLDSEE-NGNVSYYIERGDRQKQFSID--- 2295
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVDKGTPPRETY 116
+K I+V LDRE +G Y L + A D G P ++
Sbjct: 2296 -----------------QKTGQIIVAAPLDRE--EIGNYVLEVHARDSGIPVLSSF 2332
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
+AP F + Q V E PIG V+ + A D D G N+KI+YS+ G+ FTID
Sbjct: 474 HAPEFISEIIQGKVYETSPIGAAVVQVYAIDRD-KGDNAKITYSITSGNVGNMFTID 529
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P+FS Y A V+E++P+G V+ DAD + ++ R G+ F ++ +G
Sbjct: 2345 NSPLFSLSNYTAVVQEDKPLGHTVLQFVVTDADIEPNAAPYTFDFRSGNEGDAFRLEQDG 2404
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L TK + K K Y L +R D G+PP
Sbjct: 2405 TLR----TATKFNNRVKDK------------------YVLHIRVFDNGSPP 2433
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ +Y + V E +GT V + A D G+N+ + YS+ GG+ F ID
Sbjct: 2135 NPPEFASKIYFSKVPEIYAVGTEVARVLATSKDT-GVNADVYYSIVGGNEHKKFQIDART 2193
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I++ + LD E A Y LT++AVD G PP
Sbjct: 2194 GV--------------------IIIAEQLDFERAR-DYFLTIQAVDGGIPP 2223
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F D Y+ATV E+ GT+V+ L D D +N+ I + + GD F I + G
Sbjct: 1826 NPPAFVDDRYEATVNEDALPGTVVVKLITVDKD-SDVNTPIEFYITSGDPRSQFQIRSTG 1884
Query: 62 PL 63
+
Sbjct: 1885 EV 1886
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 20/108 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ Y +V E P GT V+ + + D D +N ++ Y+++ D E
Sbjct: 1201 PEFTQDSYNISVSEAAPFGTSVLRVSSRDND-TDINQQVRYAIQN---------DTENST 1250
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ F I P +E I + + LD E A ++ T+ A+D+G P
Sbjct: 1251 DLFHIDP---------EEGVIFLKRSLDHE-AHESHHFTVIAIDRGVP 1288
>gi|410927540|ref|XP_003977199.1| PREDICTED: protocadherin gamma-A5-like, partial [Takifugu rubripes]
Length = 650
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/43 (53%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAP+F+ ++A+VKEN P GTLV+ L A DAD GMN +++Y
Sbjct: 600 NAPIFAQSNFKASVKENVPKGTLVVKLSATDAD-EGMNGRVTY 641
>gi|326673323|ref|XP_003199839.1| PREDICTED: protocadherin alpha-3-like [Danio rerio]
Length = 800
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 19/115 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF +Y+A + EN IG VIT+ A DAD G+N ++ YS + DNE
Sbjct: 240 NIPVFDKPLYKARIAENSAIGASVITVSAKDAD-EGLNGEVIYS--------FINHDNEN 290
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+N F I+P T + I V LD E + ++A DKG PR ++
Sbjct: 291 SINAFL-----INPNTGE----ITVKGPLDYE-ENAAIEIRVQAEDKGQNPRASH 335
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 51/113 (45%), Gaps = 26/113 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLV--ITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P S VKE+ GT+V IT+K DA G N + +R F ++N
Sbjct: 348 NTPEISIMSLVNEVKEDSAPGTMVGLITVKDGDA---GKNGVVRLQIRDS---AQFRLEN 401
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
T K +++VV LDRE+A YN+T+ A D+GTPP
Sbjct: 402 -----------------TYKNRFSLVVNGPLDREVAS-EYNVTISAADEGTPP 436
>gi|380014510|ref|XP_003691272.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-like wing polarity
protein stan-like [Apis florea]
Length = 3167
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 19/110 (17%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+PVF + Y +V E+ PIGT V+ + A D+D G N++++YS+ G +
Sbjct: 801 SPVFENAPYSVSVFEDAPIGTTVLVVSATDSD-VGKNAQVTYSLDTDSG--------DQA 851
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ F I P + I + LDRE+ P Y LT+ A D G PP
Sbjct: 852 ASEFIINP---------QTGAITTTRPLDRELVP-AYLLTVTARDGGVPP 891
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF YQ ++ E+ +GT V+ + A DAD +N ++ Y + DG G F +D+
Sbjct: 908 NAPVFEAPQYQGSIPEDVLVGTSVLRVSATDAD-TDLNGRVRYGLE-DDGDGAFAVDSTT 965
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I K LDRE Y L A+D+G+P T
Sbjct: 966 GI--------------------IRTAKPLDRESVG-KYVLKAVAMDRGSPSLST 998
Score = 39.3 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT 56
NAP F +Q +V EN P+G ++ ++A DAD G N++I Y++ D G T
Sbjct: 586 NAPRFYTSHFQESVSENVPVGYSILRIQAYDAD-EGANAQIKYTIGARDFTGAST 639
Score = 38.5 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 17/121 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F +A+++E P+G+ V+T+KA D D G N+++ YS+ +
Sbjct: 362 HAPSFEWPEEEASIREGVPVGSTVVTVKATDQD-AGRNAEVEYSILSTTSSSGTATTEDA 420
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKL-LDREIAPLGYNLTLRAVDKGTPP--RETYKA 118
+ FR IDP T +V + LDRE + Y + L D+ TPP R+T A
Sbjct: 421 LI--FR-----IDPRT-----GVVTTRTPLDREKTEV-YTVILSVSDQATPPSARKTANA 467
Query: 119 T 119
T
Sbjct: 468 T 468
Score = 36.2 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 20/109 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F + + EN P+G+ V + A D D G N+ + YSV GG+ F ++
Sbjct: 1014 PXFENDKIILYIAENSPVGSTVGEIYAHDPD-EGPNAVVQYSVIGGEDSNSFALN----- 1067
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ PG + E ++ L+ LD E + L +RA +PP
Sbjct: 1068 ---------VRPGADRAE--LITLEELDYESPKKKFELVVRA---ASPP 1102
Score = 35.8 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F Y++ V E+ P GT V ++ A D P +++I Y + G+ G F I ++
Sbjct: 697 NDPYFDPKNYESVVSEDDPPGTPVTSVTATD---PDEDARIHYEITAGNTRGRFAIASQ 752
Score = 35.4 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 24/114 (21%)
Query: 2 NAPVFSDFVYQATVKEN--QPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P F++ Y A + E+ ++ ++A DAD G N+ + Y++ GG+ F+ID+
Sbjct: 479 NYPQFTERTYSAWIPEDLDYTANPVIARIRATDADS-GNNAAVRYAIIGGNTQNTFSIDS 537
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
++ ++K LD E + Y + +RA D G+P R
Sbjct: 538 --------------------MIGDVALVKPLDYE-STRSYKIVIRAQDGGSPAR 570
>gi|326935583|ref|XP_003213849.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like,
partial [Meleagris gallopavo]
Length = 976
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 40/112 (35%), Positives = 56/112 (50%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGY-FTIDNE 60
NAP+F +QATV EN P+G VI ++A DAD G N++++YS+ G G+ F I+N
Sbjct: 177 NAPIFVSTPFQATVLENVPVGYSVIHVQAIDAD-SGDNARLAYSLL-ETGAGFPFAINNS 234
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
IVV LDRE Y+ + A D+G+PP
Sbjct: 235 TGW--------------------IVVASELDREAVDF-YSFGVEAQDQGSPP 265
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 54/115 (46%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR-GGDGLGYFTIDNE 60
NAP F YQ +V E+ P T V+ + A D D G+N ++ Y+ + G DG G F I++
Sbjct: 487 NAPQFLRDSYQGSVYEDVPAFTSVLQVSATDRD-SGLNGRVFYTFQGGDDGDGDFIIEST 545
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ + L+ LDRE PL Y L AVDKG P R T
Sbjct: 546 SGI--------------------VRTLRRLDRENVPL-YALRAYAVDKGVPARRT 579
Score = 39.7 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 24/110 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF Y V E++P+GT V+ + A D D G N++I+Y + E +
Sbjct: 386 PVFQSSHYTVNVNEDRPVGTTVVVISATDED-TGENARITYLM-------------EDSI 431
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
FRI P D G + LD E + Y L + A D G P +
Sbjct: 432 PQFRIAP---DTGAVTTQME------LDYE-DQVSYTLAITARDNGIPQK 471
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N+P F+ Y A + E+ +GT V+T+ A D D NS I+Y + G+ F+I ++
Sbjct: 282 NSPEFTQREYSARLNEDAAVGTSVLTVSAVDRDA---NSVITYQISSGNTRNRFSITSQ 337
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N+P FS+ Y V E+ T V+ + A D D G N+ + YS+ G+ G+F ID +
Sbjct: 71 NSPQFSEKRYVVQVPEDVLPNTAVLRVTATDRDK-GSNAVVHYSIVSGNTRGHFYIDAQT 129
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G L+ V+ LD E A + L +RA D G PP
Sbjct: 130 GALD---------------------VVTPLDYE-ASKEFTLRIRAQDGGRPP 159
Score = 35.4 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVF + V+EN PIG +V + A D D G N++I Y + G+ F +D
Sbjct: 593 NPPVFERDEFDIFVEENSPIGLVVARITATDPD-EGPNAQIMYQIVEGNIPEVFQLD 648
>gi|198457068|ref|XP_002136277.1| GA27912, partial [Drosophila pseudoobscura pseudoobscura]
gi|198142590|gb|EDY71319.1| GA27912, partial [Drosophila pseudoobscura pseudoobscura]
Length = 1131
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F++ Y ++EN+P+G + ++ K +DAD ++ ++ +R G+ G F ++ +G
Sbjct: 131 NAPLFANANYSVMLQENRPLGYIFLSFKISDADESPNSTPYTFDIRSGNEGGLFRLEQDG 190
Query: 62 PL------NH-----FRIVPTKIDPGT 77
L NH FRI D GT
Sbjct: 191 SLSTAARFNHNLQDEFRIQVRVFDNGT 217
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F +Y+ E+ +GT ++ +KA D D +N I+Y++ GD +G F I
Sbjct: 26 NSPKFLQNMYRINAYEDTLVGTPILDVKATDED-SNVNGLINYNIEKGDQIGQFAI---- 80
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
K+ +I V + LDRE YNL ++A D+G P R
Sbjct: 81 ----------------HKRNGSISVSRPLDRETIA-SYNLEIQACDQGIPQR 115
>gi|391335873|ref|XP_003742311.1| PREDICTED: cadherin-23-like [Metaseiulus occidentalis]
Length = 1904
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 54/111 (48%), Gaps = 23/111 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF Y+ V EN IG+ V+T +A D D N I+YS+ EG
Sbjct: 928 NAPVFRKPFYREAVTENSKIGSPVVTARAMDVD---RNRTITYSL-------------EG 971
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P + R++ ID +K ++V +DRE N+TL+A D G PP
Sbjct: 972 PSDLLRLI--SID----RKTGEVLVSDKIDRETTSW-INVTLKATDSGFPP 1015
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
PVF+ V E+ P+G+ V+T+KA D D G+N+ I Y ++ G+ G F+I+++
Sbjct: 245 PVFTQVPAITRVAEDVPVGSSVLTVKAQDGD-RGINNAIKYRIKSGNLQGLFSINDD 300
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N PVF++ + + E+ PI T+V L A DAD G + +I+Y++ G F ID +
Sbjct: 1032 NNPVFAEGSTEFHISEDSPIATVVAQLTATDAD-AGEHGRITYALDPSGTHGKFKIDKD 1089
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP+F Y+ + E+ G+ +I ++A DAD SKI+Y + G F ID
Sbjct: 693 NAPIFKQNFYRQAIPEDIREGSSIIRVEATDADDSPAFSKIAYRIETG-AQDKFVID 748
>gi|405957381|gb|EKC23596.1| Protocadherin-11 X-linked [Crassostrea gigas]
Length = 1038
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 13/90 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD---------GL 52
N P+F+ VY+ EN IG ++ + A+D D G+NSKI YS+R D GL
Sbjct: 454 NKPIFNQQVYKVQKTENNEIGDEIVQVSASDKD-FGVNSKIQYSLRSSDQNFQINPETGL 512
Query: 53 --GYFTIDNEGPLNHFRIVPTKIDPGTKKK 80
YF +D E L+ FR+ +D G K
Sbjct: 513 IKVYFRMDRE-KLDEFRLTVYAVDQGADPK 541
>gi|432951766|ref|XP_004084895.1| PREDICTED: protocadherin gamma-A12-like [Oryzias latipes]
Length = 537
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR--GGDGLGYFTIDN 59
NAPVFS VY+AT+ EN P TLVIT+ A DAD G+N+ ++Y D + F ID
Sbjct: 232 NAPVFSQDVYKATLPENSPPETLVITVSATDAD-EGVNADVTYQFGHVSDDDVHVFLIDQ 290
Query: 60 E 60
+
Sbjct: 291 K 291
Score = 39.3 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 22/116 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+ S ++ EN P GT V + D D N ++ S++
Sbjct: 337 NNPIISLNSLSNSIPENAPPGTEVGIINVQDRDS-DKNGQVRCSIQA-----------NA 384
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
P F++VP+ K Y++V LDRE+ YN+T+ A D+G+PP + K
Sbjct: 385 P---FKLVPSI------KNYYSVVSTGQLDRELVS-DYNITISATDEGSPPLSSSK 430
>gi|348514333|ref|XP_003444695.1| PREDICTED: protocadherin alpha-2-like [Oreochromis niloticus]
Length = 625
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 56/118 (47%), Gaps = 27/118 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD----GLGYFTI 57
N PVFS VY T++EN P+ +I ++A D D G+N + Y+ GGD L FT+
Sbjct: 230 NRPVFSQEVYSVTLQENAPLDKTIIKVQATDLD-EGINGDVEYTF-GGDITSSVLRLFTL 287
Query: 58 DNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
D + I V+ +D E A + YNL ++A DKG PP T
Sbjct: 288 D--------------------RLTGEIRVIGEIDYETANV-YNLDVQASDKGQPPMTT 324
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 21/105 (20%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
+ V E+ GT+V + DAD G+NSK+ + + T + VP +
Sbjct: 349 SMVPEDSKQGTVVALITVTDADS-GLNSKV---------ICHLTEN----------VPFE 388
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ P K+ Y++V + LDRE Y++++ A D G PP T+K
Sbjct: 389 LKPSFKENMYSLVTKESLDRETVS-HYDISITATDCGEPPLSTFK 432
>gi|156383974|ref|XP_001633107.1| predicted protein [Nematostella vectensis]
gi|156220172|gb|EDO41044.1| predicted protein [Nematostella vectensis]
Length = 1096
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 22/115 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F + +V E + +GT+++T+ A D D G N ++YS+ G+ G+F+I+N
Sbjct: 452 PSFQSPSFNVSVNEIERLGTVILTVFATDGDA-GANGTLTYSISAGNEEGFFSINN---- 506
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
K I V K LDRE Y LT+ A D G PP + A
Sbjct: 507 ----------------KTGAISVAKQLDRETRDQ-YTLTVMAQDGGEPPLNSTTA 544
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 21/109 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F + + E+ P+G V+T+ A DAD N+ I++ + G+ F+ID
Sbjct: 151 NAPAFQNTPLTKSCSEDTPVGFPVVTVTATDADAT-TNAIITFVIVSGNEGEAFSID--- 206
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGT 110
K +I + K LD E P Y L + A++ T
Sbjct: 207 -----------------KVTGDITISKPLDYENGPRVYTLNISAMNNHT 238
Score = 35.0 bits (79), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N PV D V Q ++ E I T V T+ A+D D G N ++ YS+ G G+F I
Sbjct: 555 NPPVIQDAVIQVSLSETAAIDTPVATVIASDKD-IGANGRLMYSIESG-AHGHFQI 608
>gi|410913759|ref|XP_003970356.1| PREDICTED: uncharacterized protein LOC101078623 [Takifugu rubripes]
Length = 3537
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAPVF+ VY+ T+ EN GT+V T+ A+D D G+NSKI+YS+
Sbjct: 2966 NAPVFTQPVYKGTIAENAAKGTIVTTVSASDND-HGLNSKITYSI 3009
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/45 (51%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAPVF+ VY+AT+ EN P GT ++T+ A D D G N +ISY++
Sbjct: 1046 NAPVFTKSVYKATITENSPKGTSILTVSATDKD-TGSNREISYAI 1089
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG 51
NAPVF+ Y+ V EN GT+V T+ A+DAD G N+KI+YS+ G
Sbjct: 232 NAPVFTQSTYKTVVTENSAKGTVVATVTASDAD-DGANNKITYSITNALG 280
Score = 41.6 bits (96), Expect = 0.096, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 14/98 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLG-YFTIDN 59
NAPVF+ VY+A + EN GTL+ + A+DAD G + +++Y + D + F +++
Sbjct: 2140 NAPVFTKPVYKANIAENAVRGTLITKVSASDAD-KGSHGEVTYVIANSMDPVSNLFHVNS 2198
Query: 60 E------GPLN-----HFRIVPTKIDPGTKKKEYNIVV 86
E GP++ H+RI ID G I++
Sbjct: 2199 EGDVILNGPIDYEREKHYRIDIEAIDSGGLSDSSKIII 2236
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAPVF+ VY+A + EN GTL+ + A+DAD G + ++SY +
Sbjct: 1821 NAPVFTKPVYKANIAENAVRGTLITKVSASDAD-KGSHGEVSYVI 1864
>gi|119514231|gb|ABL75894.1| protocadherin 2G19 [Takifugu rubripes]
Length = 1018
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
NAPVF+ +Y+ATV EN P GTL++T+ A+D D G N K++YS
Sbjct: 306 NAPVFNQSLYKATVTENAPKGTLIMTVNASDID-SGSNGKVTYS 348
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 20/113 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F + + + E+ +G+ + A DAD G +GL + +
Sbjct: 197 NAPTFQNNHLEFEISESAALGSRFVLESAYDADV------------GVNGLQDYIL---T 241
Query: 62 PLNHFRIVPTKIDP-GTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P +HF ++ + P G+K E +V+ K LDRE P +L L AVD G P R
Sbjct: 242 PNDHF-VLKQHVHPDGSKYAE--MVIEKSLDRETQPR-LSLKLLAVDGGNPQR 290
>gi|410956743|ref|XP_003984998.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23-like [Felis catus]
Length = 2968
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 52/109 (47%), Gaps = 22/109 (20%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
APVF +Y+A+VKENQ G VI ++A D D G+NSK + + G G F
Sbjct: 1320 APVFQQNLYEASVKENQNPGEFVIRVEAMDRD-SGINSKFQFEIMPGASSGLF------- 1371
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
KI+P T + +V LDRE+ + + L + D G P
Sbjct: 1372 ---------KINPDTGE----VVTTTTLDREVQEV-FTLRVLVRDGGVP 1406
Score = 42.7 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP F+ Y ++ E+ IG ++T D D N+ + YS+ G+ F + E
Sbjct: 2145 APEFAVEYYNLSLSEDAQIGGTLLTFSTMDHDWTRENTYVDYSIISGNSQNNFHV--ETS 2202
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
H DP K+ +V+L+ LDRE+A +NL + A D G PP
Sbjct: 2203 FIHSE------DP--YKQTGYLVLLRSLDREVAA-SHNLVIVASDHGCPP 2243
Score = 42.7 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
+ P F YQA+V+E+ +GT+V+ L A D D G+N + Y + G+ G FTID+
Sbjct: 1528 HGPSFPTLHYQASVREDAEVGTVVLVLSAVDKD-EGLNGQTEYFLE-GETSGTFTIDS 1583
Score = 39.3 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N PVFS YQATV E+ P+G V+T+ A D + N ISY +
Sbjct: 2042 NPPVFSQDSYQATVPESVPVGYSVLTVGATDVES---NENISYRI 2083
Score = 38.5 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P FS Y A VKE+ P+G+ + + A D D G +++I Y + G+ G+F ++ +
Sbjct: 2260 NPPKFSSLKYHAHVKESTPLGSHITVVSANDRD-VGPHAEIIYHIISGNERGHFHLEEK 2317
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 13/118 (11%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYF----- 55
++P F + + +V+EN PIGTLV A D D +NS+I Y + G+ F
Sbjct: 1105 HSPSFQEELIVISVEENVPIGTLVHVFNAKDGDGSFLNSRIQYFIESHHPGMSPFLIHPS 1164
Query: 56 --TIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
T+ PL+ R+ + + N+ DR + L + + V+ +P
Sbjct: 1165 FGTLVTASPLDRERVPAVMLTITASDQAVNVT-----DRRVGSLMAKVVILDVNDHSP 1217
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 45/110 (40%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F VYQ +V E Q +I + A D D G+N I YS+ G N+G
Sbjct: 1837 NLPCFEQSVYQVSVPEGQFYNARIIQVFATDLD-SGLNGLIEYSILSG---------NQG 1886
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
H ++ + +LD E Y+L ++A DKG P
Sbjct: 1887 DAFHMDVLSGVVTANA-----------ILDYEFTN-SYSLIVQATDKGMP 1924
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 6 FSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI-DNEGPL 63
FS +Y+ TV EN GT ++T+KA DP + I YS+ G+ G F++ N G L
Sbjct: 1738 FSHPLYKGTVTENCDAGTSIVTVKAVAPDP--IQDSIKYSIFSGNEDGVFSLCSNSGEL 1794
Score = 35.4 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 22/98 (22%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
V E QP+ LV T+ A D D G N+++ YSV EG +HF KID
Sbjct: 906 VLEGQPVNMLVTTVFAKDFDE-GNNAEVVYSV-----------SPEGSSDHF-----KID 948
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ + I +L + P Y +T+ A D+G PP
Sbjct: 949 ANSGE----IRTTTILSHDYRP-SYRMTIIASDQGEPP 981
>gi|158297299|ref|XP_317558.4| AGAP007924-PA [Anopheles gambiae str. PEST]
gi|157015128|gb|EAA12848.4| AGAP007924-PA [Anopheles gambiae str. PEST]
Length = 5159
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 50/104 (48%), Gaps = 21/104 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F +Y+A+V E PIGT VI +KA D D N++ S+S+ GG+ F
Sbjct: 3481 PEFQRDLYEASVSEGDPIGTKVIVVKAVDKDVRPQNNQFSFSIIGGNNDHSF-------- 3532
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
KIDP + + E + LDRE P + L L A+D
Sbjct: 3533 --------KIDPQSGQIE----TARKLDRETVPT-HKLLLGAID 3563
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 56/113 (49%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQ--PIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P F D Y A V EN P VIT++A DAD P NS++ Y ++ GD +F
Sbjct: 2314 NPPTFLDSPYLAYVMENVIPPNNGYVITVRAYDADTPPFNSQVRYFLKEGD-TDFF---- 2368
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
KI+ T + I +L+ LDRE+ Y LTL A+D G+PP
Sbjct: 2369 ------------KINASTGE----ISLLRALDREMQE-EYILTLVAMDTGSPP 2404
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 54/115 (46%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A V E +G ++ L A D G+N++I Y + GG+G F I+
Sbjct: 3055 NPPVFSQRAYMAPVPEGADVGLRILQLTARDELDFGVNAEIEYQLIGGNGSDRFAIN--- 3111
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG--YNLTLRAVDKGTPPRE 114
K+D IVV + L A G + L +RAVD+G PP++
Sbjct: 3112 ----------KLDGW-------IVVGRKLSEVAASPGTVFVLQVRAVDRGVPPQQ 3149
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 51/113 (45%), Gaps = 24/113 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F YQAT+ ENQPIGT V+ +A D D G+N+KI Y++ G
Sbjct: 2423 PEFERQSYQATIAENQPIGTRVLWPRATDRD-AGLNAKIRYTLLGEHS------------ 2469
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG-TPPRET 115
+ FR+ I +LD E P+ Y+ TL A D T PR T
Sbjct: 2470 SRFRL---------DASSGEITTAAVLDCEDMPI-YHFTLMAQDSSTTEPRAT 2512
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F Y + EN PI + V+T+ A D D G N +I YS+ GD F I + G
Sbjct: 1957 NAPIFDPMSYSNEIFENAPINSDVVTVSATDID-SGSNGRIEYSITAGDDNEDFQIMSNG 2015
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
+ R + + K Y++VV
Sbjct: 2016 TIRTRRALDRE-----TKSSYSLVV 2035
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP F+ VY A V EN P T V +A D D P N+ I+Y++ GG G F I+
Sbjct: 3269 NAPYFNQSVYDAYVAENSPANTFVYRAQAHDRDSP-KNAIINYAIVGGSGRELFAIE 3324
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 17/117 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F + ++E P+ T ++T+ A D D G+N K+ Y + D D +G
Sbjct: 1422 NPPAFPNTAIVRQIREGIPLNTPIVTVTAEDPD-SGLNGKVRYEIAHQDPQ-----DGDG 1475
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
HF I PT G I L L+DRE A Y LT+ A D+ PP + A
Sbjct: 1476 E-RHFGINPTT---GV------IHTLHLIDRE-AIDTYRLTVLATDQAAPPAQRLSA 1521
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N+P+F Y A + EN IG V+ + A D D G N ++ +S+ GD FTI +
Sbjct: 2204 NSPIFDPKQYSAAIAENASIGASVLQVSATDID-EGANGRVRFSIAAGDDNRDFTISED 2261
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 14/102 (13%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN--- 59
APVF YQ V EN+PIG+ ++T+ A D D G N + Y++ G+ F +++
Sbjct: 3165 APVFQSPSYQVIVPENEPIGSTILTVSAPDND-DGPNGMVRYAILAGNERNDFMVNSVTG 3223
Query: 60 ----EGPLNH-----FRIVPTKIDPGTK-KKEYNIVVLKLLD 91
PL++ +++ T D G K K+ +V + L D
Sbjct: 3224 AVSIRNPLDYDLIQVYQLNITAEDLGYKPKRSIAMVTITLTD 3265
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
+AP F+ + Q + E PIGT ++ +A D D G N++I++S+ G+ F ID
Sbjct: 1317 DAPEFTQTLSQIAIVETTPIGTELMRFRATDLD-LGANAQIAFSIAAGNRRDTFHID 1372
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF Y+ ++ E+ P+ + L A+DAD G N +ISY++ G+ G F I +G
Sbjct: 984 HTPVFDHTSYETSLLESMPVNSRFFALAASDAD-VGPNGRISYAIVEGNVDGKFGIFPDG 1042
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L V LDRE Y LT+ D+G P
Sbjct: 1043 YL---------------------FVRSALDREERDY-YALTIACADEGRP 1070
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 46/118 (38%), Gaps = 22/118 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF Y+ + E IGT ++ + DAD G+N + Y + G+ F ID+
Sbjct: 1211 NAPVFVRAPYRVQISEGASIGTQLVRVYTHDAD-EGLNGDVFYYISEGNRAERFAIDDST 1269
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
I + + LDRE Y LT+ A D R + T
Sbjct: 1270 G--------------------QITLARALDRETTA-SYRLTVVAHDASKQHRLSASTT 1306
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
+ PVF Y A + E P GT V ++ A D D G+N++I Y G+ +F ID
Sbjct: 443 HEPVFEKSEYSAVLSELAPPGTYVASITATDED-TGVNAQIFYDFVAGNRDQWFRID 498
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 48/115 (41%), Gaps = 18/115 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y +E Q T V + A D D G NS ISYS+ +
Sbjct: 2944 NAPEFEHSYYSFNFRELQKSVTFVGQVIATDRDKQGPNSVISYSL-------------QQ 2990
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPL-GYNLTLRAVDKGTPPRET 115
P + F I P + +K++ + K E +P + LT+ A D G PP T
Sbjct: 2991 PSDLFTIDPATGEIFSKRR----IHYKHTQLEASPENSFTLTVLATDNGKPPMYT 3041
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 20/104 (19%)
Query: 12 QATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPT 71
+ +V EN P T+++ +KA D D G N + Y + D++G L P+
Sbjct: 2107 ETSVAENIPPNTVIMAIKAVDRD-EGRNGYVEYQLE----------DDQGSL------PS 2149
Query: 72 KIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
G + + + V LDRE P Y L + A D+G PPR T
Sbjct: 2150 PFTVG--QADGLLRVSGQLDREAKP-SYELNVIAKDRGDPPRMT 2190
>gi|47213034|emb|CAF95303.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4362
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 19/117 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y A ++EN PIGT V+ + A D D G+N ++ YS
Sbjct: 1388 NMPVFAKESYVAVLRENSPIGTTVLQVNATDLD-DGLNGEVVYSFGNN------------ 1434
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
+NH +ID T + I+V +D E+ Y + ++A DKG+ P ET K+
Sbjct: 1435 -VNHRLRKLFEIDADTGE----IIVKGQIDYEMKD-RYEIDIKASDKGSAPLETEKS 1485
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 19/117 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y A ++EN PIGT V+ + A D D G+N ++ YS
Sbjct: 2142 NMPVFAKESYVAVLRENSPIGTTVLQVNATDLD-DGLNGEVVYSFGNN------------ 2188
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
+NH +ID T + I+V +D E+ Y + ++A DKG+ P ET K+
Sbjct: 2189 -VNHRLRKLFEIDADTGE----IIVKGQIDYEMKD-RYEIDIKASDKGSAPLETEKS 2239
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 54/114 (47%), Gaps = 19/114 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS +Y+A + EN GT VI L A D D +N++I +S+R
Sbjct: 3383 NAPVFSRSLYKAQIPENIQAGTTVIVLNATDEDKE-LNAEIEFSLRSK--------GQND 3433
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
L+ FRI P K I+V +D E P + + +A DKG PP T
Sbjct: 3434 VLDLFRIDP---------KSGAILVNGKIDYEENP-AFEIHAQASDKGQPPMST 3477
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 55/117 (47%), Gaps = 19/117 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ VY A+V EN P GTLV + A D D G N I YS +D
Sbjct: 228 NSPVFTKEVYSASVNENSPPGTLVTRVNATDLD-EGANGDIIYSFGQ-------EVDTRV 279
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
N F I P K +I V ++D E Y + ++A DKGT P TY++
Sbjct: 280 K-NKFSIDP---------KTGDIKVTGVIDFE-ENESYEIDVQASDKGTIPLSTYRS 325
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 48/114 (42%), Gaps = 19/114 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS VY A V EN GT VI +KA D D G N +I Y G F I
Sbjct: 634 NHPIFSQEVYSADVPENVAAGTSVIKVKATDLD-EGANGEIEYFFGGQQDRRTFDI---- 688
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
F + K+ I V +D E + + L + A DKG PP T
Sbjct: 689 ----FDL---------NKETGEIKVKGGIDFEKVEV-FKLDVHATDKGQPPMST 728
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
N PVFS +Y ++ EN GTLV+ L A D D G+N +I YS
Sbjct: 2806 NRPVFSKDIYLVSLDENAQRGTLVVQLNATDLD-EGLNGEIEYS 2848
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 19/106 (17%)
Query: 10 VYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIV 69
+Y+A + EN GT VI L A D D +N++I +S+R L+ FRI
Sbjct: 3794 LYKAQIPENTQAGTTVIVLNATDEDKE-LNAEIEFSLRSK--------GQNDVLDLFRID 3844
Query: 70 PTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
P K I+V +D E P + + +A DKG PP T
Sbjct: 3845 P---------KSGAILVNGKIDYEENP-AFEIHAQASDKGQPPMST 3880
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP + +TVKE+ +GT + + D D G +G+ I N
Sbjct: 3894 NAPEITVTSLLSTVKEDAEVGTAIALVSVLDKDG------------GKNGIVRAAIANH- 3940
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
VP K+D K Y++VV LDRE + +N+T+ A D+G PP
Sbjct: 3941 -------VPFKLDTNYKNY-YSLVVNGALDRE-SQAQFNVTIVACDEGAPP 3982
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP + +TVKE+ +GT + + D D G +G+ I N
Sbjct: 3491 NAPEITVTPLLSTVKEDAEVGTAIALVSVLDKDG------------GKNGIVRAAIANH- 3537
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
VP K+D K Y++VV LDRE + +N+T+ A D+G PP
Sbjct: 3538 -------VPFKLDTNYKNY-YSLVVNGALDRE-SQAQFNVTIVACDEGAPP 3579
>gi|410948463|ref|XP_003980958.1| PREDICTED: protocadherin alpha-12 [Felis catus]
Length = 885
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 43/111 (38%), Positives = 51/111 (45%), Gaps = 19/111 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F F+Y+ V EN GTLVI L A D D G N ISYS R +
Sbjct: 561 NAPEFDQFIYKVMVLENAFNGTLVIKLNATDLD-DGANGDISYSFR--------RPVSPA 611
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
LN F I P + TK K LD E L Y +++ A+DKG P
Sbjct: 612 VLNAFIINPNSGEIRTKGK---------LDFEEKKL-YEISVEAIDKGNIP 652
Score = 39.7 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
NAP F Y+ + EN P GT VI L A+D D G+N +ISY++R
Sbjct: 238 NAPEFDKPGYRVVLFENVPNGTRVIQLNASDLD-EGVNREISYAIR 282
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F+ Y VKEN P G + T+ A DAD N+ +SYS+
Sbjct: 451 NAPTFAQAEYTVFVKENNPPGCHIFTVSARDADAQ-ENALVSYSL 494
>gi|345328664|ref|XP_001508045.2| PREDICTED: protocadherin gamma-A10-like [Ornithorhynchus anatinus]
Length = 899
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
NAPVF+ VYQ +V+E+ P+GT V+T+ A D D G++S+I YS R
Sbjct: 238 NAPVFTQSVYQVSVREDVPMGTRVVTVNATDPD-EGIHSEIRYSFR 282
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP + ++V E+ P GT++ L D D G N+ I+ S+
Sbjct: 343 NAPEVTITSLTSSVSEDSPAGTVIALLNVHDRDS-GENAFITCSI--------------- 386
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
P N +P K++ T Y +V + LDRE+ YN+T++A D+G+PP ++
Sbjct: 387 PDN----LPFKLEK-TYGNYYKLVTDRALDRELVS-HYNVTVKATDRGSPPLSSH 435
>gi|291244990|ref|XP_002742376.1| PREDICTED: hedgling-like, partial [Saccoglossus kowalevskii]
Length = 3129
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 52/115 (45%), Gaps = 24/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N P+FS +Y ++ EN IGT V T+ A D D G NS I Y++ GG F ID
Sbjct: 2568 NTPIFSQDIYTTSILENINIGTSVFTVIATDID-SGANSNIEYNITGGMSHEDFNIDIAT 2626
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
G + ID T+K Y+LT++A D GTP R +
Sbjct: 2627 GEIT----TAADIDFETRKM------------------YSLTVQATDGGTPVRSS 2659
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLG--YFTIDN 59
N P+F++ Y T+ E+ + ++T+ A DAD G N++++YS +G YF+ID+
Sbjct: 2991 NYPIFNEDEYSVTIAEDHDVNAYILTVDATDAD-NGTNAELTYSFHSSFPVGDEYFSIDD 3049
Query: 60 EG 61
G
Sbjct: 3050 NG 3051
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ V + V EN P+ TLV TL A D D G N ++Y++ G +F +D E
Sbjct: 2886 NVPQFAQSVLKLYVAENVPLSTLVDTLLATDPD-LGDNGLVNYTISSGVNADHFILDIET 2944
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ ++ +DRE+ Y T +AVD G+P
Sbjct: 2945 GV--------------------LITAADIDRELIG-SYLFTCKAVDNGSP 2973
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 43/98 (43%), Gaps = 19/98 (19%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKI 73
++ EN P TLVI D D N +++ + GD LG F IDN L I +
Sbjct: 2685 SIFENSPSDTLVIPQWVVDEDSD-ENGNVTFLLADGDPLGQFYIDNWSGL----IYTSNF 2739
Query: 74 DPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P +LDRE+ Y+L + A D GTP
Sbjct: 2740 GP-------------ILDREVQDT-YHLLVNASDLGTP 2763
>gi|74198375|dbj|BAE39672.1| unnamed protein product [Mus musculus]
Length = 784
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 49/89 (55%), Gaps = 12/89 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGM--NSKISYSVRGGDGLGYFTIDN 59
N PVFS V+ A+V E IGT VI + A DAD P + ++ + Y + G+ YF+IDN
Sbjct: 145 NWPVFSHQVFNASVPEMSAIGTSVIRVTAVDADDPTVAGHATVLYQIVKGNE--YFSIDN 202
Query: 60 EGPLNHFRIVPTKID--PGTKKKEYNIVV 86
G ++ TKI K+ EY IVV
Sbjct: 203 SG------LIFTKIKNLDREKQAEYKIVV 225
>gi|1588293|prf||2208309A cadherin:ISOTYPE=VE
Length = 783
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS V+ A+V E IGT VI + A DAD P + + + G YF+IDN G
Sbjct: 144 NWPVFSHQVFNASVPEMSAIGTSVIRVTAVDADDPTVAGHATVLYQIVKGNEYFSIDNSG 203
Query: 62 PLNHFRIVPTKID--PGTKKKEYNIVV 86
++ TKI K+ EY IVV
Sbjct: 204 ------LIFTKIKNLDREKQAEYKIVV 224
>gi|119514204|gb|ABL75867.1| protocadherin 2A27 [Takifugu rubripes]
Length = 941
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 59/114 (51%), Gaps = 19/114 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS +Y+A + EN +G VI L A DAD +N++I +S+R ++G
Sbjct: 231 NAPIFSRSLYKARIPENIQVGKTVIVLNATDADDE-LNAEIEFSLR-----------SKG 278
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
N + +IDP K I++ +D E P + + ++A DKG PP T
Sbjct: 279 QNNVLDLF--QIDP----KSGAILINGEIDFEENP-AFEIHVQATDKGQPPMST 325
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 17/111 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS+ + VKEN P+G + T+ A DAD + ++SYS + N
Sbjct: 444 NAPSFSEQLVNIYVKENSPVGATIKTITAVDAD-VDQSGQVSYS---------YLQSNSE 493
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L ++ + G +I+ L+ + E + ++A D G PP
Sbjct: 494 SLQLSSMININSETG------DIISLQSFNYEELKT-FQFKVQATDSGVPP 537
>gi|38490561|ref|NP_033998.2| cadherin-5 precursor [Mus musculus]
gi|34588132|sp|P55284.2|CADH5_MOUSE RecName: Full=Cadherin-5; AltName: Full=Vascular endothelial
cadherin; Short=VE-cadherin; AltName: CD_antigen=CD144;
Flags: Precursor
gi|2506060|dbj|BAA22617.1| cadherin-5 [Mus musculus]
gi|32451759|gb|AAH54790.1| Cadherin 5 [Mus musculus]
gi|34368549|emb|CAA58782.2| vascular endothelial-cadherin [Mus musculus]
gi|148679251|gb|EDL11198.1| cadherin 5 [Mus musculus]
Length = 784
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 49/89 (55%), Gaps = 12/89 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGM--NSKISYSVRGGDGLGYFTIDN 59
N PVFS V+ A+V E IGT VI + A DAD P + ++ + Y + G+ YF+IDN
Sbjct: 145 NWPVFSHQVFNASVPEMSAIGTSVIRVTAVDADDPTVAGHATVLYQIVKGNE--YFSIDN 202
Query: 60 EGPLNHFRIVPTKID--PGTKKKEYNIVV 86
G ++ TKI K+ EY IVV
Sbjct: 203 SG------LIFTKIKNLDREKQAEYKIVV 225
>gi|339248645|ref|XP_003373310.1| cadherin-related hmr-1 [Trichinella spiralis]
gi|316970592|gb|EFV54502.1| cadherin-related hmr-1 [Trichinella spiralis]
Length = 2378
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 41/63 (65%), Gaps = 5/63 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ +Y ++KE+ PIG ++ + A D D G+NS+I YS+ + FTIDN+G
Sbjct: 240 NAPVFTQPLYAISIKEDHPIGNPILQVSARDKD-SGLNSEIEYSLTDHN----FTIDNQG 294
Query: 62 PLN 64
++
Sbjct: 295 VIS 297
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 32/122 (26%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-------DGLGY 54
N+P F Y+A+V + P+G V+T+ A D D P N+KI+YS++ D + Y
Sbjct: 567 NSPEFDRATYEASVSRSTPVGQSVLTVFADDRDAPN-NAKIAYSLQEDLSEPEYLDDVNY 625
Query: 55 FTIDNE-GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
F+I + G + FR +P K K +V+ K D G PPR
Sbjct: 626 FSIKKDGGEIMLFRPLPV-----NKNKMMFLVIAK------------------DSGEPPR 662
Query: 114 ET 115
+
Sbjct: 663 SS 664
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGY 54
NAP F++ VY+ V+EN +G V+T+KA D D +S++ YS+ RG DG +
Sbjct: 912 NAPYFNETVYRGRVRENSEVGQNVMTVKAHDLDK---DSELRYSLDSRGNDGSAF 963
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 13/108 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y TVKE P+ + V++L A+D D +++ + YS+ + LG+
Sbjct: 1153 NPPYFYPPSYDGTVKETLPVNSPVMSLSASDLDSEAVDNVLQYSLEENNQLGF------- 1205
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE--IAPLGYNLTLRAVD 107
N+F + G+ I V + LD E + +G+NLT+R D
Sbjct: 1206 --NYFYMTTEADSSGSTVGV--IRVKQPLDFEDPLQRVGFNLTVRVSD 1249
>gi|432913578|ref|XP_004078978.1| PREDICTED: cadherin-6-like [Oryzias latipes]
Length = 812
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ VYQ +V E+ GT+V +++A D D G N+++S+S+ GD +G F I +
Sbjct: 271 NPPVFTQSVYQLSVPESAMFGTVVGSVQATDRD-IGRNAEMSFSITSGDSMGIFDISTDK 329
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
+ I K KK Y I +
Sbjct: 330 NTQNGVITVKKPLDYEKKSSYTIEI 354
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P FS VY A++ E +GT VI + A DAD G+ +K+ YS+ G YF++D
Sbjct: 160 NEPQFSQEVYTASIPERSDVGTPVIQVTATDADDSMYGIGAKLFYSISRGH--PYFSVDP 217
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVV 86
+ + P +D T K+ Y +V+
Sbjct: 218 TTGVIRTALGPKDMDRET-KEHYQVVI 243
>gi|432955682|ref|XP_004085599.1| PREDICTED: protocadherin gamma-A11-like [Oryzias latipes]
Length = 807
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
N PVFS VY+AT+ EN P GT+V+T+ A DAD G+N +I+Y
Sbjct: 234 NVPVFSQSVYKATLPENSPAGTVVLTVSAIDAD-EGINCEITY 275
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 22/116 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+ + + EN P GT V + D D Y I++
Sbjct: 338 NAPIINVKSLSNPIPENAPPGTEVGIINVQDKDSDRNRQVRCY------------IESNS 385
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
P F++VP+ K Y++V LDRE+ YN+T+ A D+G+PP + K
Sbjct: 386 P---FKLVPSI------KNYYSVVSTGQLDRELVS-DYNITISATDEGSPPLSSSK 431
>gi|345328650|ref|XP_001507731.2| PREDICTED: protocadherin gamma-A10-like [Ornithorhynchus anatinus]
Length = 829
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
NAPVF+ VYQ ++E+ P+GT ++T+ A D D G+N++++YS R
Sbjct: 238 NAPVFTQSVYQVRIREDAPVGTRLVTVNATDTD-EGVNAEVTYSFR 282
Score = 38.9 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP + V E+ P GT++ L D D G +GL +I N
Sbjct: 343 NAPEMTVTSLFNPVSEDSPSGTIIALLHVNDRD------------SGENGLVTCSIPNN- 389
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+P K++ T Y +V + LDRE+ YN+T++A D+G+PP T+
Sbjct: 390 -------LPFKLEE-TIDNFYRLVTDRALDRELVS-EYNVTVKATDRGSPPLSTH 435
>gi|194853658|ref|XP_001968202.1| GG24633 [Drosophila erecta]
gi|190660069|gb|EDV57261.1| GG24633 [Drosophila erecta]
Length = 3556
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 41/120 (34%), Positives = 57/120 (47%), Gaps = 26/120 (21%)
Query: 2 NAPVFSDFVYQA-TVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTI 57
NAP +D +V+E QP GT V+ ++A D D G N+ I+YS+ R DG G F+I
Sbjct: 1252 NAPEIADPQEDVVSVREEQPPGTEVVRVRAVDRD-NGQNASITYSIVKGRDSDGHGLFSI 1310
Query: 58 DNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
D + R+V LD E + Y L + A D G+PPRET +
Sbjct: 1311 DPSSGVIRTRVV--------------------LDHEERSI-YRLGVAASDGGSPPRETIR 1349
Score = 40.0 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT 56
N P+F Y +V EN+P+G ++ + A+D D G+N+ ++Y++ G+G + T
Sbjct: 607 NEPIFDQSFYNVSVAENEPVGRCILKVSASDPD-CGVNAMVNYTI--GEGFKHLT 658
Score = 39.7 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y +V+E+ P+GT V+ + A DAD G+N+++ YS+ + F ID++
Sbjct: 1948 NAPSFKLSKYTGSVQEDAPLGTSVLQINAVDAD-LGVNARLVYSL-ANETQWQFAIDSQS 2005
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
L I + LDRE+ YN + A D G
Sbjct: 2006 GL--------------------ITTVGKLDRELQA-SYNFMVLATDGG 2032
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NEG- 61
P+F Y VKE+ P GT+V ++ AA D S + YS+ GD GYF+I+ N G
Sbjct: 825 PIFEKARYNYYVKEDIPRGTVVGSVIAASGD-IAHRSPVKYSIYSGDPDGYFSIETNSGN 883
Query: 62 -----PLNH 65
PL+H
Sbjct: 884 IRIAKPLDH 892
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 50/112 (44%), Gaps = 14/112 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N PVF Y V E++ I +I + A+D D G N++I+Y + G D + +I +
Sbjct: 1032 NPPVFEKEEYSVNVSESRSINAQIIQVNASDLD-TGNNARITYRIVDAGVDNVTN-SISS 1089
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
HF I P I + LDRE Y LT+ A D GTP
Sbjct: 1090 SDVSQHFGIFPN---------SGWIYLRAPLDRETRDR-YQLTVLATDNGTP 1131
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 16/112 (14%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
V +NQP T+ + + DA P KIS S + G+ + ++ + + V ++
Sbjct: 386 VNDNQP--TINVIFLSDDASP-----KISESAQPGEFVARISVHDPDSKTEYANVNVTLN 438
Query: 75 PG-------TKKKEYNIVVLKL-LDREIAPLGYNLTLRAVDKGTPPRETYKA 118
G T+ +V++ L LDREI Y L++ A DKGTPP K+
Sbjct: 439 GGDGHFALTTRDNSIYLVIVHLPLDREIVS-NYTLSVVATDKGTPPLHASKS 489
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P FS + ATV E GT V + A D+D G N+++ Y + G+ F I+
Sbjct: 2318 NSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSD-AGSNARLRYHIVDGNHDNAFVIEPA- 2375
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
IV T I +LDREI + Y L + A D+G P
Sbjct: 2376 ---FSGIVRTNI---------------VLDREIRDI-YKLKIIATDEGVP 2406
Score = 35.8 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 50/116 (43%), Gaps = 24/116 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P+F+ Y ATV EN +GT V+ + A+D D N + Y++ R D F
Sbjct: 282 NQPIFNQSRYFATVPENATVGTSVLQVYASDTD-ADENGLVEYAINRRQSDKEQMF---- 336
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+IDP T I + K LD E L + L + A D G P ET
Sbjct: 337 ------------RIDPRTGA----IYINKALDFETKEL-HELVVVAKDHGEQPLET 375
Score = 35.0 bits (79), Expect = 9.2, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 26/113 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ ++EN G++V + A+D D G N+ I YS+
Sbjct: 1149 NDPKFQKSKYEFRIEENLRRGSVVGVVTASDLD-LGENAAIRYSLL-------------- 1193
Query: 62 PLN-HFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P+N F++ P + T++ LDRE+ L Y+L + A D+GTP R
Sbjct: 1194 PINSSFQVHPVTGEISTREP---------LDRELREL-YDLVVEARDQGTPVR 1236
>gi|195575605|ref|XP_002077668.1| GD22944 [Drosophila simulans]
gi|194189677|gb|EDX03253.1| GD22944 [Drosophila simulans]
Length = 3038
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 41/120 (34%), Positives = 57/120 (47%), Gaps = 26/120 (21%)
Query: 2 NAPVFSDFVYQA-TVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTI 57
NAP +D +V+E QP GT V+ ++A D D G N+ I+YS+ R DG G F+I
Sbjct: 1252 NAPEIADPQEDVVSVREEQPPGTEVVRVRAVDRD-HGQNASITYSIVKGRDSDGHGLFSI 1310
Query: 58 DNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
D + R+V LD E + Y L + A D G+PPRET +
Sbjct: 1311 DPTSGVIRTRVV--------------------LDHEERSI-YRLGVAASDGGSPPRETVR 1349
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT 56
N P+F Y +V EN+P+G ++ + A+D D G+N+ ++Y++ G+G + T
Sbjct: 607 NEPIFDQSFYNVSVAENEPVGRCILKVSASDPD-CGVNAMVNYTI--GEGFKHLT 658
Score = 40.0 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y +V+E+ P+GT V+ + A DAD G+N+++ YS+ + F ID++
Sbjct: 1965 NAPRFKLSKYTGSVQEDAPLGTSVVQISAVDAD-LGVNARLVYSL-ANETQWQFAIDSQS 2022
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
L I + LDRE+ YN + A D G
Sbjct: 2023 GL--------------------ITTVGKLDRELQA-SYNFMVLATDGG 2049
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NEG- 61
P+F Y VKE+ P GT+V ++ AA D S + YS+ GD GYF+I+ N G
Sbjct: 825 PIFEKARYNYYVKEDIPRGTVVGSVIAASGD-AAHRSPVRYSIYSGDPDGYFSIETNSGN 883
Query: 62 -----PLNH 65
PL+H
Sbjct: 884 IRIAKPLDH 892
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 51/112 (45%), Gaps = 14/112 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N PVF Y V E++ I +I + A+D D G N++I+Y + G D + +I +
Sbjct: 1032 NPPVFEKEEYSVNVSESRSINAQIIQVNASDLD-TGNNARITYRIVDAGVDNVTN-SISS 1089
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
HF I P I + LDRE A Y LT+ A D GTP
Sbjct: 1090 SDVSQHFGIFPN---------SGWIYLRAPLDRE-ARDRYQLTVLATDNGTP 1131
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 16/112 (14%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
V +NQP T+ + + DA P KIS S + G+ + ++ + + V ++
Sbjct: 386 VNDNQP--TINVIFLSDDASP-----KISESAQPGEFVARISVHDPDSKTEYANVNVTLN 438
Query: 75 PG-------TKKKEYNIVVLKL-LDREIAPLGYNLTLRAVDKGTPPRETYKA 118
G T+ +V++ L LDREI Y L++ A DKGTPP K+
Sbjct: 439 GGDGHFALTTRDNSIYLVIVHLPLDREIVS-NYTLSVVATDKGTPPLHASKS 489
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P FS + ATV E GT V + A D+D G N+++ Y + G+ F I+
Sbjct: 2335 NSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSD-AGSNARLRYHIVDGNHDNAFVIEPA- 2392
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
IV T I +LDREI + Y L + A D+G P
Sbjct: 2393 ---FSGIVRTNI---------------VLDREIRDI-YKLKIIASDEGVP 2423
Score = 35.8 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 50/116 (43%), Gaps = 24/116 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P+F+ Y ATV EN +GT V+ + A+D D N + Y++ R D F
Sbjct: 282 NQPIFNQSRYFATVPENATVGTSVLQVYASDTD-ADENGLVEYAINRRQSDKEQMF---- 336
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+IDP T I + K LD E L + L + A D G P ET
Sbjct: 337 ------------RIDPRTGA----IYINKALDFETKEL-HELVVVAKDHGEQPLET 375
Score = 35.4 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 26/113 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ ++EN G++V + A+D D G N+ I YS+
Sbjct: 1149 NDPKFQKSKYEFRIEENLRRGSVVGVVTASDLD-LGENAAIRYSLL-------------- 1193
Query: 62 PLN-HFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P+N F++ P + T++ LDRE+ L Y+L + A D+GTP R
Sbjct: 1194 PINSSFQVHPVTGEISTREP---------LDRELREL-YDLVVEARDQGTPVR 1236
>gi|328721195|ref|XP_001944272.2| PREDICTED: cadherin-related tumor suppressor-like [Acyrthosiphon
pisum]
Length = 5057
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
+ PVF Y +T+ E P+GT V ++ A D D G+N++I YS+ G+ G+F ID
Sbjct: 460 HEPVFEKSEYSSTLSELSPVGTYVASITATDED-TGINAQIFYSIVSGNAFGWFDID 515
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 55/124 (44%), Gaps = 21/124 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF Y V EN + T+V T+ A D D G+N KI YS++ +ID E
Sbjct: 1932 NAPVFETNSYNVDVYENATVNTIVATVMATDRD-SGINGKIKYSIQ--------SIDQED 1982
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
N F I P D GT N LDRE YNL + A D G P T +
Sbjct: 1983 --NDFTIDP---DNGTIWPHRN------LDRETVA-SYNLVVVAKDGGRPAASELSTTVQ 2030
Query: 122 NGLT 125
+T
Sbjct: 2031 MTIT 2034
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 20/103 (19%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
ATV EN G++V + D D G+N + + + G+ LNHFR+
Sbjct: 364 ATVDENAINGSVVAAVSVMDPDE-GLNGETTIEIISGN-----------ELNHFRL---- 407
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ + Y + V +LDRE YNLT+ A DKGTP R T
Sbjct: 408 ---ESSQSFYIVRVHGILDREQIN-KYNLTVLASDKGTPARTT 446
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ ++ + EN P+GT V + A D D P N+ I+YS+ GG G F ++
Sbjct: 3196 NPPTFNQTLFNVFILENSPVGTFVTQMVAKDLDSP-KNAIINYSITGGTGEHLFYFNSTS 3254
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKL 89
I ++ K+K Y++ +L +
Sbjct: 3255 GA----IFSKQVFDYEKEKSYSLEILAI 3278
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 26/128 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y + + N + + +IT+ A D D G+N++I Y V GG+ +D
Sbjct: 2987 NAPQFEKKKYFSPIPINLEVWSPLITVVATDHDS-GVNAEIEYFVYGGNATDLVQVDRFS 3045
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE-----TY 116
L + KL+D +++ Y+L +RA D G PP++ T+
Sbjct: 3046 GLVSLK-------------------KKLIDTDLSK-NYDLVIRATDHGVPPKQDITDVTF 3085
Query: 117 KATPRNGL 124
T N
Sbjct: 3086 TITSENNF 3093
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 25/116 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P FS YQ V EN+PIG+ V+T+KA D D G +GL ++ +N
Sbjct: 3095 PEFSSLSYQVFVPENEPIGSTVLTVKATDQD------------EGPNGLVRYSFENLS-- 3140
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
F++ D G I + ++LD E Y L + A+D G P+++ KAT
Sbjct: 3141 EKFKL---NSDTGA------ITIAQILDFE-RIREYKLNVIAMDTGFEPKKS-KAT 3185
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 49/112 (43%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y+ E Q IG V + A D D G NS +S++++
Sbjct: 2876 NAPEFEKSNYKFNFPETQKIGATVGRVIATDRDKQGSNSVVSFNLK-------------Q 2922
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVDKGTPP 112
P + F I P D TK+ + K ++I+P Y LT+ A D G PP
Sbjct: 2923 PSDVFFIDPIYGDIFTKRA----LKYKHSTKDISPENEYTLTVLATDNGKPP 2970
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 51/111 (45%), Gaps = 23/111 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y +V+E T VIT+ A D D G NS I+Y + D G F+ID+
Sbjct: 2672 NPPVFEYPFYTVSVQEETFPPTSVITVVAIDKD-TGKNSIITYRLV-DDMNGIFSIDD-- 2727
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
V +I TK LDRE Y LT+ AVD+G PP
Sbjct: 2728 -------VSGEIVTNTK-----------LDRETDD-HYTLTVEAVDQGYPP 2759
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF Y++++ E + + L A D D G N+++SY++ GD G F I +G
Sbjct: 982 HTPVFDQTSYESSLSEATAVNSRFFGLTATDGDY-GSNARLSYAIEEGDVEGNFGIFPDG 1040
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
L + LDRE Y L++ D GTP R +
Sbjct: 1041 ML---------------------YIKHRLDRESRDY-YALSVVVRDAGTPARSS 1072
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 48/118 (40%), Gaps = 23/118 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ V E P+GT V+ + D D G N + Y++ GD
Sbjct: 1195 NRPRFFRQPYRVQVSEGSPVGTHVLRVYTTDED-DGQNGAVHYTMEDGDD---------- 1243
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ FR ID GT I + LLDRE Y L + A D GT + AT
Sbjct: 1244 --DKFR-----IDNGTGM----ITINALLDRETRA-SYMLRVTAHDNGTTVQLNASAT 1289
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 16/113 (14%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLN---------- 64
V EN+PI T ++ L A DAD P + +Y + GG + T+D L
Sbjct: 3524 VSENEPINTSIMVLTATDADQPPNGAPFTYRIVGGPHREFVTLDESNGLLRTARSIDREQ 3583
Query: 65 --HFRIVPTKIDPG----TKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ IV + D G T + NIV+L D +P N+ + ++ P
Sbjct: 3584 TPNLSIVISITDNGSPQITTENLLNIVILDQNDCPSSPRSVNVLIYSIKNEYP 3636
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG 48
++P F Y + EN PIG V L A D+D G+N+KI YS+ G
Sbjct: 2358 HSPQFQQQNYVVYIDENSPIGYSVTQLTATDSD-IGLNAKIKYSLLG 2403
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVF Y A V +N P GT ++T+ A D D G N+ + Y + G F ID
Sbjct: 673 NDPVFYPQQYVAFVGDNHPTGTNILTVSAYDVD-EGENAVVEYRLASSGDSGLFYID 728
Score = 35.8 bits (81), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N P F++ + + EN+P GT V L A+D D G N++++YS+
Sbjct: 1086 NKPEFANVTFDFHINENEPAGTFVGKLSASDRD-TGRNAELTYSL 1129
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P+F Y ++V EN IG V+ L A D D G N+ I Y++ GD F+I ++
Sbjct: 2144 NSPIFDPRQYTSSVPENVTIGYTVVQLFATDKD-VGPNAGIRYTITNGDENLDFSIADDT 2202
Query: 62 PL 63
L
Sbjct: 2203 GL 2204
>gi|327265474|ref|XP_003217533.1| PREDICTED: protocadherin Fat 2-like, partial [Anolis carolinensis]
Length = 2916
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS +Y A +E+ +G +V+T+ A D D MN++I+YS+ G+
Sbjct: 1886 HVPKFSQDLYVADTREDAAVGEIVLTVLADDKDGV-MNNQITYSIVAGN----------- 1933
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PL+HF IDP T + I + K LDRE Y+L ++A D G P
Sbjct: 1934 PLSHF-----IIDPQTGE----IRIAKYLDREEIS-SYSLKVQATDNGQEP 1974
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y A V+EN P+GT V+ L +D D P S+ + G+ F I+ +G
Sbjct: 1991 NPPRFFQLNYSAAVQENSPVGTSVLELVLSDRDSPENGPPYSFKIIEGNDGKAFQINQDG 2050
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPL 97
L I+ + KE ++ +++ D I PL
Sbjct: 2051 VLVTSSIL------NRRTKEQYLLHVQVTDSGIPPL 2080
Score = 43.1 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP F+ +Y+ ++ EN G ++ TLK D D N +++ + GD LG F+++
Sbjct: 1469 NAPQFTSEIYKGSIVENAEPGLMITTLKTIDTDISEQNRQVTCYITEGDVLGQFSVN 1525
Score = 42.0 bits (97), Expect = 0.077, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGL-GYFTIDN 59
N PVF Y+A V EN P GT VI + A D D G + +++YS+R D + FTID+
Sbjct: 1361 NKPVFEANPYRAFVMENMPTGTTVIQVTANDQD-TGSDGQVTYSLRSEPDNIRKLFTIDS 1419
Query: 60 E 60
E
Sbjct: 1420 E 1420
Score = 42.0 bits (97), Expect = 0.078, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 11/114 (9%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ Y A V + P+GT V+ ++A D D G+N++I Y++ G+ +FTI
Sbjct: 119 PQFTSLHYNAEVLDAAPVGTEVVQVRALDQD-QGVNAEIHYNLEAGNNGDFFTI------ 171
Query: 64 NHFR-IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK---GTPPR 113
N F I+ K+E + +K D+ L + T+ K GTPP+
Sbjct: 172 NMFSGIITVSQKLHHSKQERFTLTVKAEDQGFPQLKDSATVNVYIKPSDGTPPQ 225
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P FS VY A+V E+ P + +I L A D D G N ISY + + +FTID+
Sbjct: 834 NRPAFSQMVYIASVSESMPPRSPIIQLFANDRD-SGRNRLISYQILEERSNASKFFTIDS 892
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I +++D E A + + +RA+D G PP
Sbjct: 893 STG--------------------EITTTQVIDYE-ANQEFYIKVRAMDHGVPP 924
>gi|348514369|ref|XP_003444713.1| PREDICTED: protocadherin gamma-B7-like, partial [Oreochromis
niloticus]
Length = 439
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
N P+FS VY+A++ EN P+GT+V+T+ A DAD G+N +++Y
Sbjct: 230 NVPMFSQAVYKASLSENSPMGTVVLTVNAVDAD-EGLNGEVTY 271
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 69 VPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
VP K+ P K Y++V LDRE+ P YN+T+ A D+G+PP + K+
Sbjct: 382 VPFKLVPSIKNY-YSLVTTGQLDRELVP-DYNITITATDEGSPPLSSSKS 429
>gi|195470324|ref|XP_002087458.1| GE15963 [Drosophila yakuba]
gi|194173559|gb|EDW87170.1| GE15963 [Drosophila yakuba]
Length = 3556
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 41/120 (34%), Positives = 57/120 (47%), Gaps = 26/120 (21%)
Query: 2 NAPVFSDFVYQA-TVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTI 57
NAP +D +V+E QP GT V+ ++A D D G N+ I+YS+ R DG G F+I
Sbjct: 1252 NAPEIADPQEDVVSVREEQPPGTEVVRVRAVDRD-HGQNASITYSIVKGRDSDGHGLFSI 1310
Query: 58 DNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
D + R+V LD E + Y L + A D G+PPRET +
Sbjct: 1311 DPSSGVIRTRVV--------------------LDHEERSI-YRLGVAASDGGSPPRETVR 1349
Score = 40.0 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT 56
N P+F Y +V EN+P+G ++ + A+D D G+N+ ++Y++ G+G + T
Sbjct: 607 NEPIFDQSFYNVSVAENEPVGRCILKVSASDPD-CGVNAMVNYTI--GEGFKHLT 658
Score = 39.7 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y +V+E+ P+GT V+ + A DAD G+N+++ YS+ + F ID++
Sbjct: 1948 NAPRFKLSKYTGSVQEDAPLGTSVLQINAVDAD-LGVNARLVYSL-ANETQWQFAIDSQS 2005
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
L I + LDRE+ YN + A+D G
Sbjct: 2006 GL--------------------ITTVGKLDRELQA-SYNFMVLAMDGG 2032
Score = 38.9 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NEG- 61
P+F Y VKE+ P GT+V ++ AA D S + YS+ GD GYF+I+ N G
Sbjct: 825 PIFEKARYNYYVKEDIPRGTVVGSVIAASGD-IAHRSPVRYSIYSGDPDGYFSIETNSGN 883
Query: 62 -----PLNH 65
PL+H
Sbjct: 884 IRIAKPLDH 892
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P FS + ATV E GT V + A D+D G N+++ Y + G+ F I+
Sbjct: 2318 NSPKFSQKQFAATVSEGNNKGTFVAQVHAFDSD-AGSNARLRYHIVDGNHDNAFVIEPA- 2375
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
IV T I +LDREI + Y L + A D+G P
Sbjct: 2376 ---FSGIVRTNI---------------VLDREIRDI-YKLKIIATDEGVP 2406
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 16/112 (14%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
V +NQP T+ + + DA P KIS S + G+ + ++ + + V ++
Sbjct: 386 VNDNQP--TINVIFLSDDASP-----KISESAQPGEFVARISVHDPDSKTEYANVNVTLN 438
Query: 75 PG-------TKKKEYNIVVLKL-LDREIAPLGYNLTLRAVDKGTPPRETYKA 118
G T+ +V++ L LDREI Y L++ A DKGTPP K+
Sbjct: 439 GGDGHFALTTRDNSIYLVIVHLPLDREIVS-NYTLSVVATDKGTPPLHASKS 489
Score = 35.8 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 50/116 (43%), Gaps = 24/116 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P+F+ Y ATV EN +GT V+ + A+D D N + Y++ R D F
Sbjct: 282 NQPIFNQSRYFATVPENATVGTSVLQVYASDTD-ADENGLVEYAINRRQSDKEQMF---- 336
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+IDP T I + K LD E L + L + A D G P ET
Sbjct: 337 ------------RIDPRTGA----IYINKALDFETKEL-HELVVVAKDHGEQPLET 375
Score = 35.4 bits (80), Expect = 8.5, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 49/112 (43%), Gaps = 14/112 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N PVF Y V E++ I +I + A+D D G N++I+Y + G D + +I +
Sbjct: 1032 NPPVFEKEEYSVNVSESRSINAQIIQVNASDLD-TGNNARITYRIVDAGVDNVTN-SISS 1089
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
HF I P I + LDRE Y L + A D GTP
Sbjct: 1090 SDVSQHFGIFPN---------SGWIYLRAPLDRETRDR-YQLMVLATDNGTP 1131
Score = 35.0 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 26/113 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ ++EN G++V + A+D D G N+ I YS+
Sbjct: 1149 NDPKFQKSKYEFRIEENLRRGSVVGVVTASDLD-LGENAAIRYSLL-------------- 1193
Query: 62 PLN-HFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P+N F++ P + T++ LDRE+ L Y+L + A D+GTP R
Sbjct: 1194 PINSSFQVHPVTGEISTREP---------LDRELREL-YDLVVEARDQGTPVR 1236
>gi|432910748|ref|XP_004078505.1| PREDICTED: neural-cadherin-like [Oryzias latipes]
Length = 3255
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP F+ VY+ +V+E++ +G ++IT+ A D D G N+K+ Y + G+ +G F ++ E
Sbjct: 1509 NAPAFAQPVYEVSVEEDKEVGFILITVTANDED-EGANAKLRYQITSGNTMGTFDVEPE 1566
Score = 42.4 bits (98), Expect = 0.070, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 2 NAPVF---SDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL 52
N PVF D+ A V ENQP GT V+ ++A DAD G+N ++ Y + DG+
Sbjct: 1073 NKPVFEECQDYSLNAAVLENQPPGTFVLRVQARDAD-MGLNGEVKYGIMHRDGV 1125
Score = 38.9 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
APVFS VY+ + E+ TLV + A D D G +SY++ GG+ F +DN+
Sbjct: 967 APVFSQSVYKTFLSEDAGPDTLVAIVHANDPDGDG----VSYAITGGNEDSNFHLDNQKG 1022
Query: 63 LNHFRIVP 70
+ R P
Sbjct: 1023 IIKLRRSP 1030
Score = 36.6 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 25/113 (22%)
Query: 2 NAPVFSDFVYQA-TVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDN 59
+APVF Y++ + E+ P+GT++ + A+D D G N SYS+ + D F +D
Sbjct: 1943 HAPVFFPQFYESPAMSEDVPVGTIIAQVTASDLD-SGQNGHFSYSISKDSDPYNQFLVDQ 2001
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G +VV LDRE + + + A D G PP
Sbjct: 2002 SGW---------------------VVVANSLDREKIS-QHKIMVLATDAGHPP 2032
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
P+F++ VY A V E+ + + ++ + A D D G N+ +++S+ GGD
Sbjct: 1837 PIFTERVYSAKVTEDLEVNSEILVVSATDGD-RGENAVVTFSIVGGD 1882
>gi|292616200|ref|XP_001920988.2| PREDICTED: neural-cadherin-like [Danio rerio]
Length = 2518
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/62 (48%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTID 58
N P F+ +Y+A+V E IGTLV+ + A D D G+N KISYS+ R GD YF ID
Sbjct: 691 NVPFFTSSIYEASVTEGVEIGTLVLQVSANDLD-LGLNGKISYSLLNDRSGD-FQYFRID 748
Query: 59 NE 60
E
Sbjct: 749 PE 750
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N PVF+ VY+ V E+ +G+ V+T+ A D D G N+K+ Y + G+ G F ++ E
Sbjct: 806 NKPVFAQPVYEVDVDEDADVGSTVLTVSANDED-EGANAKLRYQITSGNVGGVFDMEPE 863
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS VY+ V E+ TLV T+ A D D G I+Y + G+ G F ID++ L
Sbjct: 265 PVFSQPVYRTFVSEDAGPNTLVATVLAKDPDGDG----ITYKITAGNDEGNFVIDSQKGL 320
Query: 64 NHFRIVPT 71
R P+
Sbjct: 321 IRLRSSPS 328
Score = 38.5 bits (88), Expect = 0.85, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 24/114 (21%)
Query: 2 NAPVF---SDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVF +++ +A+V EN+P G+ V+ + A DAD G N K++Y G+ D
Sbjct: 370 NKPVFEKCAEYKEKASVLENKPAGSFVLQVHADDAD-EGANGKVTY--------GFMHKD 420
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ P IDP T IV DRE + Y +T+ A D+ P
Sbjct: 421 STVP-------AFSIDPETGV----IVTAIKFDRE-SQREYAVTVTATDQAADP 462
>gi|443690182|gb|ELT92388.1| hypothetical protein CAPTEDRAFT_192718, partial [Capitella teleta]
Length = 2159
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 22/116 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+FS YQAT++EN GT V + A D D G + ++ YS+ G+ F+
Sbjct: 1891 PLFSATSYQATIEENSLAGTEVFAVTATDED-SGPDGEVLYSITTGNEDQVFS------- 1942
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+DP T + +VV+ LLDRE Y LTL A+DKG P + T
Sbjct: 1943 ---------VDPVTGQ----VVVIGLLDREQIG-SYALTLAAIDKGQNPGQLSSTT 1984
>gi|327270361|ref|XP_003219958.1| PREDICTED: hypothetical protein LOC100562617 [Anolis carolinensis]
Length = 1666
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 23/117 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ VY+ T+ EN PIGTLVI L A D D G+N K+SY +F+
Sbjct: 210 NPPVFNQSVYKVTLLENAPIGTLVIHLHAIDKD-EGLNGKVSY---------FFS----- 254
Query: 62 PLNHFRIVPTKIDP--GTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+H P KI ++ + V+ +D E Y + +RA D+G+P +T+
Sbjct: 255 --SH---TPQKIRKIFSLGEQTGEVRVMGSVDYE-EDTSYEIDVRAKDQGSPSMDTH 305
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 56/112 (50%), Gaps = 19/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS Y + +KEN P G+L+ T+ A+D D G NS+++YSV T+ +
Sbjct: 423 NAPSFSQNFYTSFLKENNPPGSLLCTVVASDPD-EGDNSRLTYSVAD-------TLIQDA 474
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE-IAPLGYNLTLRAVDKGTPP 112
PL+ F I+P NI D E + L +T+R D G+PP
Sbjct: 475 PLSSF----VYINPDNG----NIYAQHSFDYEKLQVLQIPVTVR--DAGSPP 516
Score = 42.4 bits (98), Expect = 0.068, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ ++EN P+G +++T+ A DAD NS++SYS+ + E
Sbjct: 1255 NPPQFDRSFYEVVIEENNPVGMVLLTVSATDADKE-QNSRLSYSILASQKQEF----GED 1309
Query: 62 PLNHFRIVPT 71
P + I PT
Sbjct: 1310 PTTYVSINPT 1319
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N PVF Y + EN P GTLVI L A D D G N +I YS+
Sbjct: 1042 NHPVFEKATYYTRLVENSPPGTLVIKLNATDLD-EGSNGQIQYSL 1085
>gi|357623110|gb|EHJ74394.1| dachsous [Danaus plexippus]
Length = 463
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 55/116 (47%), Gaps = 24/116 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N PVF++ Y A + EN +GT V+ + A D+D G N I YS+ R D F
Sbjct: 104 NPPVFAESAYSAMIPENATVGTTVLKVFAIDSD-EGENGVIEYSINRRQSDRDNMF---- 158
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
KI+P T + I+V KLLD E L + L + A DKG P ET
Sbjct: 159 ------------KINPDTGE----IIVNKLLDFETKEL-HELVVVARDKGAQPLET 197
Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F + Y+A V E GT V+ + A DAD G NS+I YS+ +F+ID
Sbjct: 322 NPPTFLESEYKANVPEAAAPGTPVLQVSAFDAD-EGENSEIRYSILPSPQSDWFSIDERS 380
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L R+ +D E P+ LT+ A D+G PP
Sbjct: 381 GLVTTRV--------------------RVDCETNPMP-KLTVVASDRGNPP 410
>gi|307179930|gb|EFN68065.1| Putative fat-like cadherin-related tumor suppressor-like protein
[Camponotus floridanus]
Length = 3508
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 25/111 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP F+ Y +T+ E+ +GTLV + A D D G+N KI Y + DG
Sbjct: 1934 NAPKFTMQTYSSTLPEDVEVGTLVTKVHATD-DDIGINRKIRYEFIDSADG--------- 1983
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
HF I D G + + K LDRE + YN+T++A+D+GTP
Sbjct: 1984 ----HFLIAA---DSGI------VTLAKPLDRETKAM-YNVTIQALDQGTP 2020
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 52/116 (44%), Gaps = 24/116 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS+ Y+A V+E+ IG V + A D D N ISY + GD F+ID
Sbjct: 2143 NAPIFSEVSYRAFVREDAKIGEKVTQVYANDLDSEE-NGNISYYIERGDRQKQFSID--- 2198
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR-EIAPLGYNLTLRAVDKGTPPRETY 116
+K I+V LDR EIA Y L + A D G P ++
Sbjct: 2199 -----------------RKTGQIIVAAPLDREEIA--SYVLEVHARDNGIPMLSSF 2235
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ +Y A V E IGT V + A D G+N+ I YS+ GG+ F I+ +
Sbjct: 2038 NPPEFASKIYFAKVPEIYAIGTEVARVLATSKD-TGINADIYYSIVGGNEHKKFQINAKT 2096
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I++ + LD E A Y LT++AVD G PP
Sbjct: 2097 GV--------------------IIIAEQLDYERAR-DYFLTIQAVDGGIPP 2126
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F D Y+ATV EN GT+V+ L D D +N+ I + + GD F I + G
Sbjct: 1729 NAPAFVDDRYEATVNENALPGTVVVKLITIDKD-SDVNTPIEFYITSGDPRSQFQIRSTG 1787
Query: 62 PL 63
+
Sbjct: 1788 EV 1789
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F + Q V E PIG+ V+ + A D D G N++I+YS+ G+ F ID +
Sbjct: 378 HQPEFISEIIQGKVYETSPIGSAVVQMCAIDRD-RGENARITYSITSGNVGNVFAIDPD- 435
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L R V + LD ++ Y L ++A+D G+P
Sbjct: 436 -LGFIR------------------VARELDLSVSS-EYILLVKAIDHGSP 465
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y A V+E++P+G V+ DAD ++ R G+ F ++ +G
Sbjct: 2248 NPPLFSLPNYTAIVQEDKPLGHTVLQFMVTDADIEPNAEPYTFDFRSGNEGDAFRLEQDG 2307
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L TK + K K Y L +R D G+PP
Sbjct: 2308 TLR----TATKFNNRVKDK------------------YVLHVRVFDNGSPP 2336
>gi|410913731|ref|XP_003970342.1| PREDICTED: uncharacterized protein LOC101075470 [Takifugu rubripes]
Length = 4803
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 59/114 (51%), Gaps = 19/114 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS +Y+A + EN +G VI L A DAD +N++I +S+R ++G
Sbjct: 231 NAPIFSRSLYKARIPENIQVGKTVIVLNATDADDE-LNAEIEFSLR-----------SKG 278
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
N + +IDP K I++ +D E P + + ++A DKG PP T
Sbjct: 279 QNNVLDLF--QIDP----KSGAILINGEIDFEENP-AFEIHVQATDKGQPPMST 325
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 51/118 (43%), Gaps = 24/118 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N PVFS +Y+ V E P+GT ++ L A D D G N + YS+ RG F++D
Sbjct: 4241 NTPVFSQSLYKVRVSEGVPVGTQILKLNANDLD-EGSNGDLRYSLMKRGNVNSEKFSVDP 4299
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
E IVV LD E + Y L ++A D+G PR Y
Sbjct: 4300 ESG--------------------EIVVKASLDYEESG-AYELRVQATDQGASPRSGYS 4336
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 36/61 (59%), Gaps = 6/61 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV----RGGDGLGYFTI 57
N PVFS +Y+A++ EN IGT VITL A D D G N ++ YS+ RG + F I
Sbjct: 2635 NPPVFSQTLYKASIHENAKIGTSVITLNATDRD-AGQNGQVFYSISNLGRGKEN-DLFAI 2692
Query: 58 D 58
D
Sbjct: 2693 D 2693
Score = 42.7 bits (99), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P+FS +Y+ V EN +G ++TL A D D G+N ++ YS G F + +
Sbjct: 3448 NSPLFSKSLYKVQVVENANVGATILTLSATDLD-DGVNGELVYSFAER---GRFNPEVKF 3503
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
LN + G + NI D E P Y + ++A DKGTPPR +
Sbjct: 3504 ALN--------VHNGEITLKGNI------DYEENP-AYEIRVQARDKGTPPRTAHS 3544
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 52/114 (45%), Gaps = 25/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR--GGDGLG-YFTID 58
N PVF+ +Y+ + EN P G+ VI L A D D G N+++ YS+R G D + F ID
Sbjct: 1046 NHPVFTQSLYKIQILENLPRGSSVIVLNATDKD-EGSNNEVEYSLRKKGQDRVKEIFQID 1104
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K I+V +D E P + + +A DKG PP
Sbjct: 1105 --------------------AKSGAILVKGKIDFEENP-AFEIHAQATDKGQPP 1137
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTID 58
N PVFS +Y+ V EN I + +ITL A D D G N +I YS+ G F ID
Sbjct: 1846 NPPVFSQTLYKCAVYENAKISSSIITLNATDLD-EGENGRILYSLIEMDEGKHTDLFAID 1904
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N P+F + ++ VKEN P+G ++ T+ A+D+D N I YSV
Sbjct: 2059 NRPLFIENIFNIYVKENSPVGAIIKTVSASDSD-TDQNGHIRYSV 2102
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N P+F + V+ VKEN P+G ++ T+ A+D+D N I YS+
Sbjct: 2848 NRPLFIENVFNIYVKENSPVGAIIKTVSASDSD-TDQNGHIRYSI 2891
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 20/112 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F + + E+ G + +A DAD G N+ +Y +
Sbjct: 1739 NSPSFHSSLQIINISESTAAGAKFLLNRARDADV-GKNAVNTYKL--------------S 1783
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P +HF +V K D + + +++LK+LDRE + LTL AVD GTP +
Sbjct: 1784 PNDHFSLVTHKGDNASPE----LLLLKVLDREKQSV-IRLTLTAVDGGTPAK 1830
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S + +KE+ +GT+V + D D G N +S +R
Sbjct: 4348 NAPEISVTSLMSPIKESAGLGTVVALVSVTDKD-GGQNGHLSCKIRDSSPFAL------- 4399
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K Y++VV LLDRE Y++T+ A D+GTPP
Sbjct: 4400 -------------KSNYKSYYSLVVDGLLDRETIS-QYDVTIVATDEGTPP 4436
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 17/111 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS+ + VKEN P+G + T+ A DAD + ++SYS + N
Sbjct: 444 NAPSFSEQLVNIYVKENSPVGATIKTITAVDAD-VDQSGQVSYS---------YLQSNSE 493
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L ++ + G +I+ L+ + E + ++A D G PP
Sbjct: 494 SLQLSSMININSETG------DIISLQSFNYEELKT-FQFKVQATDSGVPP 537
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 17/111 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS+ + VKEN P+G + T+ A DAD + ++SYS + N
Sbjct: 1259 NAPSFSEQLVNIYVKENSPVGATIKTITAVDAD-VDQSGQVSYS---------YLQSNSE 1308
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L ++ + G +I+ L+ + E + ++A D G PP
Sbjct: 1309 SLQLSSMININSETG------DIISLQSFNYEELKT-FQFKVQATDSGVPP 1352
>gi|443705216|gb|ELU01871.1| hypothetical protein CAPTEDRAFT_220753 [Capitella teleta]
Length = 9334
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 57/130 (43%), Gaps = 23/130 (17%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+NAPVF D + T++++ G +IT+ A DADP + ISY + G DN
Sbjct: 1879 LNAPVFIDAPFAKTIRKDVGFGNSIITVSATDADPQDSYNDISYEIIG---------DNS 1929
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE---TYK 117
P R D G +V + R + Y + +RA D G+PP+ T +
Sbjct: 1930 AP----RFFKINSDTG-------LVSVGDDLRSDTEIFYVVRIRAYDNGSPPKAAVTTLE 1978
Query: 118 ATPRNGLTCP 127
T L CP
Sbjct: 1979 VTLNRNLNCP 1988
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 22/113 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTI-D 58
+N PVF YQA++++N+P+ + IT+ A DAD +++I Y+V G + + YF + +
Sbjct: 1132 LNPPVFPQEQYQASIQDNEPLDSGFITVSATDADVQAPHNEIRYAVVGDNTAMTYFMVNE 1191
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
N G + + + +DP DR +A Y + ++A DKG P
Sbjct: 1192 NTGAVGIKQSLA--LDP---------------DRRLA---YTVYIQAYDKGEP 1224
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 20/111 (18%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP F Y A V E+ PIGT V T+ A D D PG S+I+Y + G D P
Sbjct: 8066 APQFFPVSYSAVVSEHDPIGTNVTTVTANDLDIPGPKSQINYDIVG---------DGSAP 8116
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
F + P++ D +++ + L + A + Y L + A D+G+P +
Sbjct: 8117 -EFFFVHPSRGD---------VMISRSLTADTASI-YTLRILARDQGSPQQ 8156
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 25/118 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGM----NSKISYSVRGGDGLG--YFT 56
+PVFS Y V E + G VIT+ A+D+D NS++ Y + D + YF
Sbjct: 8709 SPVFSPMQYSTDVAETESYGMSVITVTASDSDSILQRNTPNSQVHYQINQFDAVANSYFG 8768
Query: 57 IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+D + +IV +DR++ P YN T+ A+D G P R+
Sbjct: 8769 VDRSSGV------------------ISIVKPLTIDRDLRP-QYNFTVYAMDDGQPQRK 8807
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 27/120 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ T+ E+ P+ T VIT+ A D D M ++ S G + L +F I+++
Sbjct: 7240 NVPRFEQSTYQKTLSEDFPLVTEVITVVATDPDQDAMTYEL-VSSEGNEALDFFFIEDQ- 7297
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLK--LLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
GT ++LK L+D + +T+RA D+GT PR + AT
Sbjct: 7298 -------------TGT-------ILLKKPLIDTNTQQ--FTMTVRAYDQGT-PRSSADAT 7334
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-N 59
+NAP FS Y + ENQP+G +++T+ A DAD + + +S+ + +F +D N
Sbjct: 2194 LNAPQFSPSSYNIQLPENQPLGEVLVTVSARDADANPPQNTLRFSLEQDETSDFFQLDAN 2253
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKL 89
G ++ + + I T++ E I V L
Sbjct: 2254 TGSVS---LKKSLIGETTERYELRISVTDL 2280
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 49/114 (42%), Gaps = 26/114 (22%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDN 59
+NAP F + ++ EN+P+ T+V T+KA D D N I Y + G+G YF I
Sbjct: 8488 INAPAFDVGIVNISIPENRPVRTVVATMKATDDD----NDFIQYRLAETGNGFEYFEI-- 8541
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
D G V L+ E A L Y L + A D GTP +
Sbjct: 8542 ------------GADSGA-------VTLRSSLLESADLKYQLMIIAEDNGTPQK 8576
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG-GDGLGYFTIDN 59
+ AP F+ Y T+ +P+ V ++A DAD + S I+YS++G G L YF I +
Sbjct: 1028 LEAPEFNPASYDVTIDFTKPVNEEVEIVRATDADSNSIFSSITYSIQGDGKALNYFKIGS 1087
Query: 60 EG 61
E
Sbjct: 1088 ES 1089
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 53/125 (42%), Gaps = 20/125 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVI-TLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP F Y+ + E P+GT + + A D D G NS+I + + GDG Y
Sbjct: 145 NAPQFQGIPYEVLISELTPVGTTIFRQITATDLD-AGSNSQIDFDIVAGDGSIY------ 197
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYN---LTLRAVDKGT-PPRETY 116
+ HF I ++ E +V+ LD E G N L + A D PR+T
Sbjct: 198 DGVRHFHI--------PRQDEGLVVIANALDFESLAEGRNYYILNISATDNSNFDPRKTS 249
Query: 117 KATPR 121
T R
Sbjct: 250 YTTLR 254
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 50/119 (42%), Gaps = 22/119 (18%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTID-NE 60
AP + Y+ + E Q G + ++ A D D G NS ++Y + G + G+ YF ID N
Sbjct: 1351 APQWEQNNYKLQILETQVSGIPISSISANDRDGEGPNSLVTYYLTGDNLGISYFQIDENS 1410
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
G ++ V LL + Y LT A D+G P + + AT
Sbjct: 1411 GSIS--------------------VRKSLLADQFGTEEYRLTAVARDQGKPQKSSINAT 1449
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL-GYFTIDNEG 61
P F+ Y ++ E+Q +G++ TLKA D D +++ YSV G + YF++D++
Sbjct: 4012 PSFTQADYSVSLNEDQTVGSVFETLKATDGDERAPFNQLVYSVIGDNRAPVYFSVDSQS 4070
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 22/111 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDNEGP 62
PVF Y T+ E ++T++A DAD G NSK++Y + G D +FT
Sbjct: 8173 PVFQPDGYSITIAETFTPSLPILTVEAMDADVAGPNSKVTYKITGDDTARQFFT------ 8226
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I P T N ++ +A + + ++A D+G PPR
Sbjct: 8227 ----------ITPSTGSIALNQSLIG-----VATKLFMIQVQASDQGIPPR 8262
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG-GDGLGYFTIDNEG 61
P F+ Y A+V E IG VI + A D D G S++SY + G + YF I +E
Sbjct: 3361 PQFTMSSYTASVPETLQIGGSVIDVSARDDDSEGAFSRVSYQLIGDSNAAEYFQIQSES 3419
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNS-KISYSVRGG----DGLGYFT 56
N P F+D +Y T+ E I T ++T++A D D NS K+ Y + G D +F
Sbjct: 8591 NGPQFNDQLYNYTIGEYTRIQTSILTVQARDDDSESTNSGKLRYELEGASPSLDATDFFV 8650
Query: 57 ID 58
I+
Sbjct: 8651 IN 8652
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLG-YFTIDN 59
+NAP F + + +N GT++ T++A+DAD N+ I YS+ G D YF +D+
Sbjct: 2832 LNAPQFISSSTRLQLLDNSAPGTILGTVEASDADREAPNNVIEYSLTGEDEADQYFYLDS 2891
Query: 60 EG 61
+
Sbjct: 2892 QS 2893
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYF 55
+N P+F + Y A V EN PIG ++ T+ A+D D +I YS+ Y
Sbjct: 6828 VNGPIFGESNYDAKVVENFPIGQIIATVSASDLD----GDQIRYSLDSDQDFFYI 6878
>gi|432878495|ref|XP_004073337.1| PREDICTED: protocadherin beta-9-like [Oryzias latipes]
Length = 643
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVFS VY+A++ EN P+ T+V+T+ A DAD G+N +SY
Sbjct: 230 NAPVFSQAVYEASLPENSPLDTVVVTVSATDAD-EGVNGDVSY 271
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 22/116 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+ S ++ EN P GT V + D D N ++ S++
Sbjct: 335 NAPIISLNSLSNSIPENAPPGTEVGIINVQDRDSD-KNGQVRCSIQAN-----------A 382
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
P F++VP+ K Y++V LDRE+ YN+T+ A D+G+PP + K
Sbjct: 383 P---FKLVPSI------KNYYSVVSTGQLDRELVS-DYNITISATDEGSPPLSSSK 428
>gi|432879481|ref|XP_004073492.1| PREDICTED: protocadherin alpha-2-like [Oryzias latipes]
Length = 828
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 51/119 (42%), Gaps = 25/119 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG---LGYFTID 58
NAP+FS +Y+ + EN +G+ + TL DAD G NS+I YS+R D L F ID
Sbjct: 235 NAPIFSSSLYKIQILENVAVGSKIFTLNVTDAD-DGTNSEIVYSLRSKDQDHILDAFQID 293
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
P V KID +K + + A DKG PP +
Sbjct: 294 ---PETGIISVKGKIDYEERK------------------AFEIRAEARDKGQPPMSAHS 331
>gi|351707599|gb|EHB10518.1| Protocadherin-23 [Heterocephalus glaber]
Length = 3020
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 22/109 (20%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
APVF +Y+A+VKENQ G V + A D D G+NSK+ + + G G+F I+
Sbjct: 1372 APVFKQHLYEASVKENQSPGEFVTRVGATDRD-SGINSKLQFEIISGASFGFFKIN---- 1426
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
D G +V LDRE+ + + L + D+G P
Sbjct: 1427 ----------ADTG------EVVTTTTLDREVQGV-FTLRVLVRDEGVP 1458
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 39/124 (31%), Positives = 55/124 (44%), Gaps = 23/124 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F +YQA+V E Q VI + A+D D G+N ++ YS+ G+ F ID
Sbjct: 1889 NAPCFEQSIYQASVSEGQGYNAHVIQVTASDPD-SGLNGRVEYSIVSGNQGEAFQIDALS 1947
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ + LLD E + Y+L +A DKG PR + AT R
Sbjct: 1948 GV--------------------LTTSALLDHE-STKSYSLITQATDKGK-PRLSATATVR 1985
Query: 122 NGLT 125
+T
Sbjct: 1986 IQVT 1989
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F VY T+ E+ P+G + ++A+DAD G+ + YS+ G F D
Sbjct: 319 NEPIFWRQVYNVTLAEHTPVGHCFLQVQASDAD-AGLYGCVEYSLYDG-----FQSDEAP 372
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
P+ +IDP T + I V + LDRE P ++L + A D G
Sbjct: 373 PV-------FQIDPHTGQ----ICVSQDLDRERDPASFDLLVTAKDGG 409
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
++P F D V +V EN P+GTL+ T A D D +NS++ Y +
Sbjct: 1157 HSPAFQDQVISISVDENVPVGTLLHTFNAKDGDGSFLNSRVQYVI 1201
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N PVFS+ YQ TV E+ P+G V+T+ A D D N ISY +
Sbjct: 2094 NPPVFSEDFYQVTVPESVPLGYSVLTVSATDLDS---NENISYRI 2135
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 13/111 (11%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP F+ Y T+ E+ +G+ + T D D N+ YS+ G+
Sbjct: 2197 APEFTVGYYNLTLNEDALVGSTLTTFSTFDRDWTPENTYAEYSIISGNS----------- 2245
Query: 63 LNHFRIVPTKIDPGTKKKEY-NIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N+F + T + K+ ++V+L LDRE A + L + A D G PP
Sbjct: 2246 QNNFHVETTSVHSEYPHKQVGDLVLLHSLDRE-ASASHQLVILASDHGCPP 2295
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++P F YQ +V+E+ +GT+V+ L A D D G+N + Y + G+ G FTI+
Sbjct: 1580 HSPAFPMLHYQPSVREDAAVGTVVLVLSAVDKD-EGLNGQTEYFLV-GESSGAFTIN 1634
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 13/102 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N P FS Y A VKE+ P G+ + + A+D D G +++I Y V G+ +F ++
Sbjct: 2312 NPPRFSSLQYHAHVKESAPPGSRITVVSASDCD-MGSHAEIFYQVISGNEKEHFYLEERT 2370
Query: 61 ------GPLNH-----FRIVPTKIDPGTKKKEYNIVVLKLLD 91
PL++ F + D K + +V + LLD
Sbjct: 2371 GVLYLIKPLDYEETTKFTLTVQASDGDKKHFSFAVVFISLLD 2412
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMN-SKISYSVRGGDGLGYFTIDNEGP 62
PVFS Y+A+V E GT V + A+DAD PG + +++ Y++ L +E
Sbjct: 201 PVFSQEHYRASVSEAAAPGTTVTWVSASDADEPGTDHARLRYALDQSSAL----CSSEAL 256
Query: 63 LNHFRIVPT-KIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P IDP + I ++ LDRE A L + A D G PP
Sbjct: 257 RPGAECGPAFTIDPESGA----ISTVRTLDRE-AQEALELRVVAQDLGEPP 302
Score = 35.4 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 49/116 (42%), Gaps = 28/116 (24%)
Query: 2 NAPVFSDFV----YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N+P F + + V E+QP+ LV T+ A D D G N+++ YSV D +F I
Sbjct: 941 NSPFFPQCLPGKEFHIKVLEDQPVNMLVTTVFAKDLD-EGNNAEVIYSVSSEDYSDHFKI 999
Query: 58 D-NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
D N G + I+ YN Y LT+ A D+G PP
Sbjct: 1000 DANSGEIRTSTIL-----------SYNY-----------RRSYRLTVIASDQGQPP 1033
>gi|262263250|tpg|DAA06627.1| TPA_inf: protocadherin gamma c4 isoform [Anolis carolinensis]
Length = 949
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 23/117 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ VY+ T+ EN PIGTLVI L A D D G+N K+SY +F+
Sbjct: 239 NPPVFNQSVYKVTLLENAPIGTLVIHLHAIDKD-EGLNGKVSY---------FFS----- 283
Query: 62 PLNHFRIVPTKIDP--GTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+H P KI ++ + V+ +D E Y + +RA D+G+P +T+
Sbjct: 284 --SH---TPQKIRKIFSLGEQTGEVRVMGSVDYE-EDTSYEIDVRAKDQGSPSMDTH 334
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F YQ V EN +G +I++ A D D G NS++SYS+
Sbjct: 452 NAPSFLHPAYQTLVTENNALGMPIISVSAFDPD-LGQNSQLSYSL 495
>gi|395817827|ref|XP_003782348.1| PREDICTED: protocadherin alpha-2 [Otolemur garnettii]
Length = 817
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 41/110 (37%), Positives = 54/110 (49%), Gaps = 19/110 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ VY+ + EN P GTLV+ L A+DAD G NS++ YS+ TI +
Sbjct: 239 NEPTFAQSVYKVKLLENTPNGTLVVKLNASDAD-EGSNSELVYSLSSDVS---STIQTK- 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
F I P+ + TK K LD E A Y + + A DKGTP
Sbjct: 294 ----FNIDPSSGEIRTKGK---------LDFEEAKF-YEIQVTATDKGTP 329
Score = 35.0 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAPVF Y VKEN G + T+ A DAD N+ +SYS+
Sbjct: 452 NAPVFEQLEYTVFVKENNLPGCHIFTVTARDADAK-ENALVSYSL 495
>gi|395856533|ref|XP_003800682.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Otolemur garnettii]
Length = 4378
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
NAP F +Y V E+ P T V+ + A D D N ++ Y+ + G DG G FTI+
Sbjct: 1065 NAPQFVTSLYTGLVSEDAPPFTSVLQISATDRDAHA-NGRVQYTFQNGEDGDGDFTIEPT 1123
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ + ++ LDRE P+ Y LT AVD+G PP T
Sbjct: 1124 SGI--------------------VRTVRRLDREAVPV-YELTAYAVDRGVPPLRT 1157
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y + E+ +GT V+++ A D D NS ISY + GG+ F I +G
Sbjct: 860 NRPEFTMKEYHLRLNEDAAVGTSVVSVTAVDRDA---NSAISYQITGGNTRNRFAISTQG 916
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREI 94
+ +V + K++ Y +VL DR +
Sbjct: 917 GVG---LVTLALPLDYKQERYFKLVLTASDRAL 946
Score = 38.9 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG 48
+ P+F +Q +V EN P+G VI ++A DAD G N+++ YS+ G
Sbjct: 755 HTPIFVSTPFQVSVLENAPLGHSVIHIQAVDAD-HGENARLEYSLTG 800
Score = 38.9 bits (89), Expect = 0.76, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS+ Y A V+E+ T+V+ + A D D N + Y++ G+ G+F ID+
Sbjct: 649 NAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDA-NGLVHYNIISGNSRGHFAIDS-- 705
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I V+ LD E A Y L +RA D G PP
Sbjct: 706 ------------------LTGEIQVVAPLDFE-AEREYVLRIRAQDAGRPP 737
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF Y ++ E++P+G+ V+ + A+D D G N++I+Y + D L F ID
Sbjct: 964 PVFQSAHYSVSMNEDRPVGSTVVVISASD-DDVGENARITYFLE--DNLPQFRID 1015
Score = 35.8 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP+F ++ VKEN +G++V + A D D G N+ I Y + G+ F +D
Sbjct: 1171 NAPIFPAEEFEVRVKENSIVGSVVAQITAVDPD-EGPNAHIMYQIVEGNIPELFQMD 1226
>gi|432953273|ref|XP_004085329.1| PREDICTED: protocadherin beta-11-like [Oryzias latipes]
Length = 1070
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVFS VY+A++ EN P+ T+V+T+ A DAD G+N +SY
Sbjct: 771 NAPVFSQAVYEASLPENSPLDTVVVTVSATDAD-EGVNGDVSY 812
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVFS+ VY A+++EN P+ T VI + A+DAD G+N +I+Y
Sbjct: 226 NAPVFSESVYTASLQENSPLNTPVIRVSASDAD-EGINGEITY 267
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 22/116 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+ S +++ EN P GT V + D D N ++S S++
Sbjct: 876 NAPIISLKSLSSSIPENAPPGTEVGIINVQDRDSD-KNGQVSCSIQAN-----------A 923
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
P F++VP+ K Y++V LDRE+ YN+T+ A D+G+PP + K
Sbjct: 924 P---FKLVPSI------KNYYSVVSTGQLDRELVS-DYNITISATDEGSPPLSSSK 969
>gi|326673321|ref|XP_003199838.1| PREDICTED: protocadherin alpha-7-like [Danio rerio]
Length = 792
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 58/117 (49%), Gaps = 19/117 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF VY T+ EN P+GT ++ + A D D G N + YS LG+ D
Sbjct: 240 NAPVFIKEVYSVTLNENTPVGTTILRVNATDLD-EGQNGVVVYS------LGHDVNDKLR 292
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
L + ++P T + IVV LLD E+ + Y + ++A DKG P T K+
Sbjct: 293 KLFN-------VNPVTGE----IVVTGLLDFEVKDI-YEIDIQASDKGIAPLTTDKS 337
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 21/117 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P +T+ E+ GT V + +D D G+N +++ S+
Sbjct: 348 NEPQIEVTSLSSTIPEDSKPGTTVALISVSDLDS-GINGRVTCSLSEN------------ 394
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
+P ++ P +++ Y++V LDRE Y++TL A D G PP + K+
Sbjct: 395 -------IPFQLMPSSQENTYSLVTTSALDRETIA-HYDITLEAKDAGQPPLSSVKS 443
>gi|149421338|ref|XP_001507542.1| PREDICTED: protocadherin gamma-A10, partial [Ornithorhynchus
anatinus]
Length = 769
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
NAPVF+ +YQ V+E+ +GT ++TL A D D G+NS+++YS+R
Sbjct: 195 NAPVFTQSIYQVRVREDASVGTRILTLNATDPD-EGVNSEVTYSLR 239
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP + ++ E+ P+GT++ L D D G +GL +I ++
Sbjct: 300 NAPELAVTSLINSIHEDSPLGTVIALLNVHDRD------------SGDNGLVTCSIPSDL 347
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P + ID +V ++LDRE+ YN+T+ A D+G+PP
Sbjct: 348 PFK----LEKSID-----NYLRLVTDRILDRELVS-NYNVTVTATDRGSPP 388
>gi|119514203|gb|ABL75866.1| protocadherin 2A26 [Takifugu rubripes]
Length = 911
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 25/118 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG---LGYFTID 58
N P+FS +Y+ + EN +GT VIT+ A DAD G+N +I YS+R D L F ID
Sbjct: 235 NIPLFSQALYKTKIPENTSLGTRVITVNATDAD-EGLNGEILYSLRSKDQDRVLDIFEID 293
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+E + V ID K+ + + + A DKG PP +
Sbjct: 294 SESGV---ITVKGNIDFEDKR------------------AFEIRVEASDKGQPPMSAH 330
>gi|198437132|ref|XP_002124366.1| PREDICTED: similar to KIAA0279 protein [Ciona intestinalis]
Length = 2808
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 25/116 (21%)
Query: 2 NAPVFSDFV-YQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDN 59
N+P+F Y ++ENQ I T + T+KA DAD G N +++YS VR F I
Sbjct: 324 NSPIFERPSGYNVAIRENQAIRTQIQTVKADDAD-SGKNGELTYSIVRSVPHTNAFAITQ 382
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
EG N++V L+DRE A Y LT+ A D+G+P R +
Sbjct: 383 EG---------------------NLIVNGLIDRE-AHSQYLLTIAARDQGSPSRNS 416
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 15/109 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
NAPVF YQ V E+ + V+T+ A D D N +I Y+ GG +G GYF++D
Sbjct: 847 NAPVFQQTKYQGEVSEDSRVSQRVLTIHATDRDSSN-NGEIRYTFEGGNNGNGYFSVDPH 905
Query: 61 G-------PLNH-----FRIVPTKIDPGTKKKEYNI-VVLKLLDREIAP 96
PL+ + +V +D GT K ++ + + +LD + P
Sbjct: 906 SGDIRTALPLDREHIDKYDLVAFAVDQGTPKLSSSVAITINILDVDDNP 954
Score = 38.9 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 21/112 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y V E+ P+G+ ++ ++A D D +S+I+Y++
Sbjct: 534 NTPHFISSPYNKVVLESAPVGSKILQVEAEDGDALRSSSRIAYTI--------------- 578
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
LN VP +ID + I + + LD E Y T++A D G+P R
Sbjct: 579 -LNRGSPVPFRID----LQNGTIQLSQKLDHERQG-SYTFTVQASDHGSPRR 624
Score = 38.1 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 45/110 (40%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y V EN + +++ + A DAD GMN +SY + G
Sbjct: 430 NHPQFTRAQYNVRVYENARVNSIIANISATDAD-SGMNGLVSYVLYSGR----------- 477
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
FRI P + I ++ LD E+ Y L +RA D G P
Sbjct: 478 --RTFRINP---------QTGEISLIARLDYEVTKR-YQLRVRATDNGRP 515
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
+ P+F Y T+ EN PIG LV+ + A D D G N++I+Y D + F I++
Sbjct: 744 HTPIFEPNYYPVTLPENVPIGHLVVQVHAVDGD-IGDNARITYCF--SDAVSNFQINS 798
>gi|57529059|ref|NP_001009586.1| protocadherin 2 alpha a 15 [Danio rerio]
gi|54013410|dbj|BAD60794.1| protocadherin1-alpha-av15-vCP [Danio rerio]
Length = 939
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 56/117 (47%), Gaps = 19/117 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF VY T+ EN P+GT ++ + A D D G N + YS LG+ D
Sbjct: 240 NAPVFIKEVYSVTLNENTPVGTTILRVNATDLD-EGQNGVVVYS------LGHDVNDKLR 292
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
L F + P + IVV LLD E+ + Y + ++A DKG P T K+
Sbjct: 293 KL--FNVNPVTGE---------IVVTGLLDFEVKDI-YEIDIQASDKGIAPLTTDKS 337
Score = 38.5 bits (88), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 21/117 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P +T+ E+ GT V + +D D G+N +++ S+
Sbjct: 348 NEPQIEVTSLSSTIPEDSKPGTTVALISVSDLDS-GINGRVTCSLSEN------------ 394
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
+P ++ P +++ Y++V LDRE Y++TL A D G PP + K+
Sbjct: 395 -------IPFQLMPSSQENTYSLVTTSALDRETIA-HYDITLEAKDAGQPPLSSVKS 443
>gi|326673345|ref|XP_003199850.1| PREDICTED: protocadherin-10-like [Danio rerio]
Length = 791
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 16/105 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGY--FTID 58
N P FS +Y +++EN P+GTLVI L A D D G N +I YS V+ + Y F +D
Sbjct: 240 NRPKFSQELYSVSLRENAPLGTLVIKLNATDLD-EGQNGEIVYSFVKNIEKYIYDTFDLD 298
Query: 59 NEGPL-----------NHFRIVPTKIDPGTKKKEYNI-VVLKLLD 91
N G + N +RI D G K N +++K++D
Sbjct: 299 NTGEIRVKGSLDFEKSNVYRIAVMASDKGQPPKTSNCRIIIKVID 343
>gi|326673293|ref|XP_003199824.1| PREDICTED: protocadherin-10-like [Danio rerio]
Length = 791
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 16/105 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGY--FTID 58
N P FS +Y +++EN P+GTLVI L A D D G N +I YS V+ + Y F +D
Sbjct: 240 NRPKFSQELYSVSLRENAPLGTLVIKLNATDLD-EGQNGEIVYSFVKNIEKYIYDTFDLD 298
Query: 59 NEGPL-----------NHFRIVPTKIDPGTKKKEYNI-VVLKLLD 91
N G + N +RI D G K N +++K++D
Sbjct: 299 NTGEIRVKGSLDFEKNNVYRIAVMASDKGQPPKTSNCRIIIKVID 343
>gi|195160152|ref|XP_002020940.1| GL16483 [Drosophila persimilis]
gi|194117890|gb|EDW39933.1| GL16483 [Drosophila persimilis]
Length = 5086
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 24/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y A+++EN PIGTLV+ A D D G+N+K+ +++ G+ + F ID
Sbjct: 2394 NGPVFELQSYHASIQENLPIGTLVLQPTATDKD-AGLNAKLRFNLL-GEHMARFHIDT-- 2449
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG-TPPRET 115
D G I +LDRE + Y+LTL A D T PR +
Sbjct: 2450 ------------DTGV------ITTATVLDREETAV-YHLTLMAQDSSITEPRAS 2485
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 52/113 (46%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQ--PIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P F D Y A V EN P V+T+ A DAD P +NS++ Y ++ GD
Sbjct: 2287 NRPTFLDSPYLARVMENTVPPNDGYVLTVNAYDADTPPLNSQVRYFLKEGDS-------- 2338
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ FRI I +LK LDRE Y LTL A+D G+PP
Sbjct: 2339 ----DLFRI---------NASTGAIALLKQLDRETQS-EYILTLVAMDTGSPP 2377
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N+PVF Y A+V EN IG +V+ + A D D G N +I YS+ GD F+I +
Sbjct: 2181 NSPVFDPKQYSASVAENASIGAMVLQVSATDVD-EGANGRIRYSIMTGDQNQDFSISED 2238
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 22/104 (21%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
ATV EN GT+V + D+D G+N + + + G+ LG+F ++ + PL H
Sbjct: 338 ATVDENAVNGTVVAAVSVIDSDD-GLNGETTTRIVSGNELGHFRLE-KTPLFHI------ 389
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVDKGTPPRET 115
+ V +LDRE +G YNLT+ A+D+GTP R T
Sbjct: 390 -----------VRVNGVLDRE--EIGKYNLTVVAMDRGTPARIT 420
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF Y A + E P G+ V ++ A D D G+N+++ Y + G+ L +F+ID
Sbjct: 434 HEPVFEKSEYSAVLSELAPTGSYVASITATDED-TGVNAQVHYEILSGNELKWFSIDAAT 492
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
L I LDREI L++ A D G P+ Y
Sbjct: 493 GL--------------------IATAGALDREIKD-SVELSISARDGGPNPKFAY 526
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F Y + V EN P G V+T+ A D D G N I Y + GD F ID+ G
Sbjct: 1925 NAPLFDPMSYSSEVFENVPTGMEVVTVSAKDID-SGNNGLIEYIITAGDADEEFGIDSNG 1983
Query: 62 PLNHFR 67
+ R
Sbjct: 1984 TIRTRR 1989
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 53/119 (44%), Gaps = 24/119 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y + + E PIGT V T++A D D N++ SYS+ G+ F ID
Sbjct: 3452 PEFLKRYYTSVISEAAPIGTKVTTVRAVDKDVRPQNNQFSYSIINGNLKQGFKID----- 3506
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDRE-IAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ G I LDRE IA Y+L + A+D G PP +T AT R
Sbjct: 3507 ---------VQSG------EISTAARLDREDIA--HYSLVIGAIDTGLPP-QTGSATVR 3547
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
+ P F+ YQ V EN+PIG+ ++T+ A D D G N + Y++ GG+ F +D
Sbjct: 3134 HTPEFTARSYQVIVPENEPIGSTILTVGATDED-VGPNGMLRYAISGGNENRDFMVD 3189
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 9/107 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
NAP F Y T+ E GT ++ + DAD G+N + Y + G+G G F++D+
Sbjct: 1203 NAPEFLRAPYHVTISEGASEGTHIMHVFTQDAD-EGLNGDVYYFLAKGNGAGLFSLDSAT 1261
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREI-APLGYNLTLRAV 106
G L R K+D + ++ + ++++ D + PL N T+ V
Sbjct: 1262 GQLTLAR----KLD--RESQDVHHLIVEARDAALKGPLSSNATISIV 1302
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVF+ V EN+P GT ++TL A D D P +Y + G + ++D
Sbjct: 3556 NGPVFAPEGLLGYVSENEPAGTSIMTLSATDPDLPRNGGPFTYQLVAGKHKSWLSVD 3612
Score = 36.2 bits (82), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
N P+F+ Y V EN+P+GT V A D D P N+ + YS
Sbjct: 3239 NPPLFNQSEYHGYVAENKPVGTFVFQAHATDKDSP-KNAIVHYS 3281
>gi|149048259|gb|EDM00835.1| rCG62628 [Rattus norvegicus]
Length = 1580
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ VYQA+V E Q VI + A D D G+NS+I YS+ G+ G F ID
Sbjct: 450 NPPRFAQTVYQASVSEGQFYSAHVIQVSATDLD-GGLNSQIEYSIVSGNQAGAFRIDELS 508
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ IV +LD E + Y+L ++A D+G P
Sbjct: 509 GV--------------------IVTNSILDYE-STSSYSLIVQATDRGVP 537
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 21/115 (18%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID---- 58
AP F+ Y ++ E+ PIG+ ++T D D N+ YS+ G+ YF I+
Sbjct: 758 APEFTVGSYNLSLSEDAPIGSTLMTFSTIDHDYSFENTHTEYSIISGNLHNYFHIETSLL 817
Query: 59 -NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+E P +K +V+L LDRE A + L + A D G PP
Sbjct: 818 GSESP---------------HQKSGALVLLHALDRE-ASASHRLVILASDHGCPP 856
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAP FS Y VKE+ P+G+ IT+ +AD G +++I Y + G+ +F +++
Sbjct: 873 NAPTFSSRQYHTHVKESTPVGSH-ITMVSADDRDTGSHAQIIYGIISGNEKEHFYLED 929
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++P F YQ+ V+E+ +GT+V+ L A D D G+N ++ Y + + G F ID
Sbjct: 179 HSPAFPMLHYQSAVREDAEVGTVVLVLSAVDKD-EGLNGQVEYFLM-EETSGAFAID 233
>gi|402872776|ref|XP_003900280.1| PREDICTED: protocadherin alpha-2 [Papio anubis]
Length = 824
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 42/112 (37%), Positives = 55/112 (49%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ VY+ + EN GTLV+ L A+DAD G NS+I YS+ G D
Sbjct: 238 NEPTFAQSVYKVKLLENTANGTLVVKLNASDAD-EGSNSEIVYSL-GSD----------- 284
Query: 62 PLNHFRIVPTK--IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
F + TK IDP + + I + LD E A Y + + A DKGTP
Sbjct: 285 ---VFSTIQTKFTIDPSSGE----IRTMGKLDYEEAK-SYEIQVTATDKGTP 328
Score = 36.2 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F+ Y VKEN P G + T+ A DAD N+ +SYS+
Sbjct: 451 NAPTFAQPEYTVFVKENNPPGCHIFTVSAWDADAQ-ENALVSYSL 494
>gi|256071526|ref|XP_002572091.1| cadherin [Schistosoma mansoni]
Length = 1498
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 61/117 (52%), Gaps = 21/117 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F + Y+A +KEN PIGT +I + A D D G+N++I YS++ +NE
Sbjct: 677 NEPTFEEQFYKAEIKENSPIGTKIIKIHAVDKD-VGVNAQIYYSLQ----------ENEL 725
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
+ +F KIDP IV LDRE A + + LT+ A+D G +T ++
Sbjct: 726 FVPYF-----KIDPIMGW----IVNSAELDRE-AQVTFQLTVLAIDGGYDALDTSRS 772
Score = 39.3 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 10/74 (13%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGY---FTIDNE 60
P FS VY+ +KE+ P+ + + LKA D D +NS I+YS+ G L F I +
Sbjct: 289 PTFSKAVYEIQIKEDIPVNSTIYELKATDKD---VNSTITYSMENGVDLNTTLKFFIKSN 345
Query: 61 GPLNHFRIVPTKID 74
G + IV K+D
Sbjct: 346 G----YVIVQQKLD 355
>gi|241735363|ref|XP_002413931.1| Gb2-cadherin, putative [Ixodes scapularis]
gi|215507785|gb|EEC17239.1| Gb2-cadherin, putative [Ixodes scapularis]
Length = 1518
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 62/139 (44%), Gaps = 22/139 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGG----DGLGYF 55
NAP F +Y V EN G V+T+ A D D P G N++++YS+ +G F
Sbjct: 212 NAPFFPSAIYTGNVTENGTAGMTVMTMTATDYDDPNEGNNARLTYSIEQNQVNENGELIF 271
Query: 56 TIDNE-GPLN------------HFRIVPTKIDPGTKKKEYNIVVLKL-LDRE--IAPLGY 99
TID E G ++ + I +D G K E VL L LD E G+
Sbjct: 272 TIDEETGVISTAVCCLDRETNPEYTIKVVAVDGGGLKGESCCHVLNLPLDYEDLQQRFGF 331
Query: 100 NLTLRAVDKGTPPRETYKA 118
N+T++ D G + Y A
Sbjct: 332 NITIQVSDNGGESTDPYHA 350
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNE 60
N P F + +V EN +G+ + T KA DAD G S++SY + R D
Sbjct: 365 NKPEFERPNIEVSVPENSTVGSSLATFKATDADQGG-KSRVSYMIDRSSD---------- 413
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
F+I P + + + + LDRE P + + + A+D G P R
Sbjct: 414 -KKRQFKINPNGV----------VEIQRTLDREDIPR-HQVKILAIDDGVPSR 454
>gi|442768494|gb|AGC70194.1| protocadherin fat-like protein, partial [Stylophora pistillata]
Length = 975
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL 52
PVF + Y A V+E+ P+G V+ + A D DPPG NS+I Y + G +
Sbjct: 354 PVFPEGSYSANVREDFPVGAAVLVIHAVDRDPPGRNSRIQYRLSGDNAF 402
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYF 55
P F +Y VKEN P+ T+V+ L+ A+ I+YS+ GG+ GYF
Sbjct: 127 PTFPSNLYHGRVKENSPVDTIVLGLENCFAEDRDTEGSITYSISGGNEKGYF 178
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 15/98 (15%)
Query: 12 QATVKENQPIGTLV-ITLKAADAD----PPGMNSKISYSVRGGDGLGYFTID-NEGPLNH 65
QA++ EN+ I T V ++ A D+D P G ++ YS+ G GL YF ID N G L
Sbjct: 470 QASIPENRAINTKVGSSIIATDSDGSQRPEG---QVVYSIASGSGLPYFKIDANTGDLRS 526
Query: 66 FRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTL 103
++ + K+ +YN+++ + D+ + PL NL +
Sbjct: 527 VAVLDKE-----KQPQYNLLI-EARDKSLYPLKSNLYM 558
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P F Y AT+ E+ P+ T V+ ++A DAD G N I Y + GG +F++D
Sbjct: 238 NDPKFDKDTYTATINEDTPLMTSVLRVRATDAD-VGTNGGIYYYISGGS--PWFSVD 291
>gi|432958355|ref|XP_004085994.1| PREDICTED: protocadherin gamma-A11-like, partial [Oryzias latipes]
Length = 660
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 9/62 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS VY+AT+ EN P GT+V+T+ A DAD G+N +SY G+ + NE
Sbjct: 233 NVPVFSQSVYKATLPENSPAGTVVLTVTAVDAD-EGVNGNVSY--------GFNHVSNEN 283
Query: 62 PL 63
+
Sbjct: 284 QI 285
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 22/116 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PV +++ EN P GT V + D D N ++S S++
Sbjct: 337 NVPVIIVKSLSSSIPENAPPGTEVGIINVQDRDSD-KNGQVSCSIQAN-----------A 384
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
P F++VP+ K Y++V LDRE+ YN+T+ A D+G+PP + K
Sbjct: 385 P---FKLVPSI------KNYYSVVSTGQLDRELVS-DYNITISATDEGSPPLSSSK 430
>gi|198475669|ref|XP_001357109.2| GA17399 [Drosophila pseudoobscura pseudoobscura]
gi|198137906|gb|EAL34175.2| GA17399 [Drosophila pseudoobscura pseudoobscura]
Length = 4959
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 24/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y A+++EN PIGTLV+ A D D G+N+K+ +++ G+ + F ID
Sbjct: 2265 NGPVFELQSYHASIQENLPIGTLVLQPTATDKD-AGLNAKLRFNLL-GEHMARFHIDT-- 2320
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG-TPPRET 115
D G I +LDRE + Y+LTL A D T PR +
Sbjct: 2321 ------------DTGV------ITTATVLDREETAV-YHLTLMAQDSSITEPRAS 2356
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 52/113 (46%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQ--PIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P F D Y A V EN P V+T+ A DAD P +NS++ Y ++ GD
Sbjct: 2158 NRPTFLDSPYLARVMENTVPPNDGYVLTVNAYDADTPPLNSQVRYFLKEGDS-------- 2209
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ FRI I +LK LDRE Y LTL A+D G+PP
Sbjct: 2210 ----DLFRI---------NASTGAIALLKQLDRETQS-EYILTLVAMDTGSPP 2248
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N+PVF Y A+V EN IG +V+ + A D D G N +I YS+ GD F+I +
Sbjct: 2052 NSPVFDPKQYSASVAENASIGAMVLQVSATDVD-EGANGRIRYSIMTGDQNQDFSISED 2109
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 22/104 (21%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
ATV EN GT+V + D+D G+N + + + G+ LG+F ++ + PL H
Sbjct: 410 ATVDENAVNGTVVAAVSVIDSDD-GLNGETTTRIVSGNELGHFRLE-KTPLFHI------ 461
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVDKGTPPRET 115
+ V +LDRE +G YNLT+ A+D+GTP R T
Sbjct: 462 -----------VRVNGVLDRE--EIGKYNLTVVAMDRGTPARIT 492
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF Y A + E P G+ V ++ A D D G+N+++ Y + G+ L +F+ID
Sbjct: 506 HEPVFEKSEYSAVLSELAPTGSYVASITATDED-TGVNAQVHYEILSGNELKWFSIDAAT 564
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
L I LDREI L++ A D G P+ Y
Sbjct: 565 GL--------------------IATAGALDREIKD-SVELSISARDGGPNPKFAY 598
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F Y + V EN P G V+T+ A D D G N I Y + GD F ID+ G
Sbjct: 1796 NAPLFDPMSYSSEVFENVPTGMEVVTVSAKDID-SGNNGLIEYIITAGDADEEFGIDSNG 1854
Query: 62 PLNHFR 67
+ R
Sbjct: 1855 TIRTRR 1860
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 53/119 (44%), Gaps = 24/119 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y + + E PIGT V T++A D D N++ SYS+ G+ F ID
Sbjct: 3323 PEFLKRYYTSVISEAAPIGTKVTTVRAVDKDVRPQNNQFSYSIINGNLKQGFKID----- 3377
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDRE-IAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ G I LDRE IA Y+L + A+D G PP +T AT R
Sbjct: 3378 ---------VQSG------EIRTAARLDREDIA--HYSLVIGAIDTGLPP-QTGSATVR 3418
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAP F+ + +V E P GT ++ +A+D+D G+NS++ +S+ G+ F ID+
Sbjct: 1152 NAPEFTQSSSEVSVLETSPSGTELMRFRASDSD-QGVNSQVVFSISAGNRRDTFHIDS 1208
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
+ P F+ YQ V EN+PIG+ ++T+ A D D G N + Y++ GG+ F +D
Sbjct: 3005 HTPEFTARSYQVIVPENEPIGSTILTVGATDED-VGPNGMLRYAISGGNENRDFMVD 3060
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 9/107 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
NAP F Y T+ E GT ++ + DAD G+N + Y + G+G G F++D+
Sbjct: 1046 NAPEFLRAPYHVTISEGASDGTHIMHVFTQDAD-EGLNGDVYYFLAKGNGAGLFSLDSAT 1104
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREI-APLGYNLTLRAV 106
G L R K+D + ++ + ++++ D + PL N T+ V
Sbjct: 1105 GQLTLAR----KLD--RESQDVHHLIVEARDAALKGPLSSNATISIV 1145
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVF+ V EN+P GT ++TL A D D P +Y + G + ++D
Sbjct: 3427 NGPVFAPEGLLGYVSENEPAGTSIMTLSATDPDLPRNGGPFTYQLVAGKHKSWLSVD 3483
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
N P+F+ Y V EN+P+GT V A D D P N+ + YS
Sbjct: 3110 NPPLFNQSEYHGYVAENKPVGTFVFQAHATDKDSP-KNAIVHYS 3152
>gi|327270427|ref|XP_003219991.1| PREDICTED: protocadherin gamma-A2-like [Anolis carolinensis]
Length = 819
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/44 (54%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
NAPVF+ VYQ + E+ PIG LV+TL A DAD G N++++YS
Sbjct: 237 NAPVFNQPVYQLNILESVPIGFLVVTLNATDAD-EGTNAEVTYS 279
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 19/113 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F++ + + E +GT +A DAD G NS +Y +
Sbjct: 127 NAPTFAEESLELRISETAIVGTHFPLQEAQDAD-SGNNSIQNYHLSSSS----------- 174
Query: 62 PLNHFRIVPTKIDPGTKKKEY-NIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
HF + K+ G+ + +Y +V++K LDRE + + LTL A D G P R
Sbjct: 175 --KHFSL---KLQRGSDRDKYPELVLVKSLDREEEAVQF-LTLTATDGGHPVR 221
>gi|390354040|ref|XP_785422.3| PREDICTED: protocadherin Fat 1-like isoform 2 [Strongylocentrotus
purpuratus]
Length = 2084
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 22/106 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ VY +V EN + TL+ ++A D D N + YSVRGG+ G F++D++
Sbjct: 691 NPPAFTQLVYNVSVSENTTVNTLLTRVQAVDPDKDA-NRRHRYSVRGGNSEGTFSLDDQS 749
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ + + + LDRE+ YNLTL D
Sbjct: 750 GI--------------------LTLTEPLDRELRS-HYNLTLAVTD 774
Score = 43.1 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 22/104 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ VY V E+ PIGT+ ++++A D D G N+ + Y + GD P
Sbjct: 485 PRFTQKVYPGEVLESDPIGTVTVSIQAVDGD-VGTNAHVVYYITSGD-----------PF 532
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
NHF I + I V LDRE+ Y L + A D
Sbjct: 533 NHFAI---------ESNSGKIYVANPLDRELKDT-YRLNVTATD 566
Score = 42.4 bits (98), Expect = 0.066, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 24/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS+ +Y T+ E + VI + A DAD G N ++SYS+ G+ F I+ +
Sbjct: 901 NAPLFSEDIYSTTINEAARVEGDVIQVMATDAD-SGANGRVSYSIIHGNLFNQFIINPDN 959
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE-IAPLGYNLTLRAVDKGTPPRET 115
L + + LDRE IA Y+L +RA D G P T
Sbjct: 960 GL--------------------VSLAAKLDREQIA--SYSLGVRASDAGDEPSFT 992
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F +Y A++ E+ IG+ V+T+ A D G+N++I Y + G+ G F ID+
Sbjct: 796 NEPQFESDLYNASIAEDAEIGSTVVTVIAISQD-VGLNAEIMYQIVSGNEHGKFKIDSAI 854
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I V LD E++ Y LT++A D GT P
Sbjct: 855 G--------------------EITVASELDFEMSN-KYYLTVKATDMGTNP 884
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 10/124 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF D Y +V EN P+ ++ + A DAD G N ++ Y + + L F
Sbjct: 375 NMPVFEDTTYSISVPENTPVDDAILKVIARDAD-AGSNGQVLYYLDVENDLEVFEKFEVN 433
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLT----LRAVD-KGTPPRETY 116
++ + +D T Y+I++L R++ ++ T + VD +PPR T
Sbjct: 434 EMSGMLTIQEGLDRETAVT-YDILILA---RDVTNADFSATATVHVTVVDFNDSPPRFTQ 489
Query: 117 KATP 120
K P
Sbjct: 490 KVYP 493
Score = 35.8 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV + +Y ++EN G ++ + A+DAD G N++I++S+ G G FTI+ +
Sbjct: 585 NSPVCAQTLYTENIRENLAAGHYILYVSASDAD-IGSNAEITFSLE-GQGSELFTIEKDL 642
Query: 62 PLN 64
+N
Sbjct: 643 GVN 645
>gi|390354038|ref|XP_003728246.1| PREDICTED: protocadherin Fat 1-like isoform 1 [Strongylocentrotus
purpuratus]
Length = 2093
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 22/106 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ VY +V EN + TL+ ++A D D N + YSVRGG+ G F++D++
Sbjct: 691 NPPAFTQLVYNVSVSENTTVNTLLTRVQAVDPDKDA-NRRHRYSVRGGNSEGTFSLDDQS 749
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ + + + LDRE+ YNLTL D
Sbjct: 750 GI--------------------LTLTEPLDRELRS-HYNLTLAVTD 774
Score = 43.1 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 22/104 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ VY V E+ PIGT+ ++++A D D G N+ + Y + GD P
Sbjct: 485 PRFTQKVYPGEVLESDPIGTVTVSIQAVDGD-VGTNAHVVYYITSGD-----------PF 532
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
NHF I + I V LDRE+ Y L + A D
Sbjct: 533 NHFAI---------ESNSGKIYVANPLDRELKDT-YRLNVTATD 566
Score = 42.4 bits (98), Expect = 0.067, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 24/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS+ +Y T+ E + VI + A DAD G N ++SYS+ G+ F I+ +
Sbjct: 901 NAPLFSEDIYSTTINEAARVEGDVIQVMATDAD-SGANGRVSYSIIHGNLFNQFIINPDN 959
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE-IAPLGYNLTLRAVDKGTPPRET 115
L + + LDRE IA Y+L +RA D G P T
Sbjct: 960 GL--------------------VSLAAKLDREQIA--SYSLGVRASDAGDEPSFT 992
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F +Y A++ E+ IG+ V+T+ A D G+N++I Y + G+ G F ID+
Sbjct: 796 NEPQFESDLYNASIAEDAEIGSTVVTVIAISQD-VGLNAEIMYQIVSGNEHGKFKIDSAI 854
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I V LD E++ Y LT++A D GT P
Sbjct: 855 G--------------------EITVASELDFEMSN-KYYLTVKATDMGTNP 884
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 10/124 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF D Y +V EN P+ ++ + A DAD G N ++ Y + + L F
Sbjct: 375 NMPVFEDTTYSISVPENTPVDDAILKVIARDAD-AGSNGQVLYYLDVENDLEVFEKFEVN 433
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLT----LRAVD-KGTPPRETY 116
++ + +D T Y+I++L R++ ++ T + VD +PPR T
Sbjct: 434 EMSGMLTIQEGLDRETAVT-YDILILA---RDVTNADFSATATVHVTVVDFNDSPPRFTQ 489
Query: 117 KATP 120
K P
Sbjct: 490 KVYP 493
Score = 35.8 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV + +Y ++EN G ++ + A+DAD G N++I++S+ G G FTI+ +
Sbjct: 585 NSPVCAQTLYTENIRENLAAGHYILYVSASDAD-IGSNAEITFSLE-GQGSELFTIEKDL 642
Query: 62 PLN 64
+N
Sbjct: 643 GVN 645
>gi|297295263|ref|XP_002804600.1| PREDICTED: protocadherin alpha-2-like [Macaca mulatta]
Length = 808
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 42/112 (37%), Positives = 55/112 (49%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ VY+ + EN GTLV+ L A+DAD G NS+I YS+ G D
Sbjct: 238 NEPTFAQSVYKVKLLENTANGTLVVKLNASDAD-EGSNSEIVYSL-GSD----------- 284
Query: 62 PLNHFRIVPTK--IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
F + TK IDP + + I + LD E A Y + + A DKGTP
Sbjct: 285 ---VFSTIQTKFTIDPSSGE----IRTMGKLDYEEAK-SYEIQVTATDKGTP 328
>gi|327270429|ref|XP_003219992.1| PREDICTED: protocadherin gamma-A10-like [Anolis carolinensis]
gi|262263293|tpg|DAA06593.1| TPA_inf: protocadherin gamma a1 unspliced isoform [Anolis
carolinensis]
Length = 827
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
N PVFS VY+ V EN PI +L+IT+ A D D G+NS+I+Y+ R
Sbjct: 237 NVPVFSQSVYKMAVMENLPIDSLIITINATDLD-EGINSEITYTFR 281
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 49/119 (41%), Gaps = 22/119 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP + TV EN P+GT + LK D D G N + S+ G
Sbjct: 342 NAPEIAVTSLTNTVSENSPVGTAIALLKVVDRD-SGENGIVICSILG------------N 388
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
P H + T Y++V + LDRE YN+T+ A DKG PP T P
Sbjct: 389 PPFHLQ--------KTFDSYYSLVTDRALDREETS-DYNVTITATDKGVPPLSTTTIIP 438
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYF 55
NAP F + Y + + EN P GT +I LKA D D N++I YS+ G+ Y
Sbjct: 447 NAPTFKEKSYISFISENIPPGTSIIRLKATDPDWE-ENARIMYSIVEGNMKSYL 499
>gi|392338882|ref|XP_002726011.2| PREDICTED: protocadherin-23-like [Rattus norvegicus]
gi|392345759|ref|XP_002729134.2| PREDICTED: protocadherin-23-like [Rattus norvegicus]
Length = 2730
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ VYQA+V E Q VI + A D D G+NS+I YS+ G+ G F ID
Sbjct: 1599 NPPRFAQTVYQASVSEGQFYSAHVIQVSATDLD-GGLNSQIEYSIVSGNQAGAFRIDELS 1657
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ IV +LD E + Y+L ++A D+G P
Sbjct: 1658 GV--------------------IVTNSILDYE-STSSYSLIVQATDRGVP 1686
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF +Y+A+VKENQ G V ++A D D G+NSK + + G G F I+
Sbjct: 1083 PVFKQLLYKASVKENQSPGAFVTRVEAEDMD-SGVNSKCRFEIMPGPAFGLFEIN 1136
Score = 43.9 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 21/115 (18%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID---- 58
AP F+ Y ++ E+ PIG+ ++T D D N+ YS+ G+ YF I+
Sbjct: 1907 APEFTVGSYNLSLSEDAPIGSTLMTFSTIDHDYSFENTHTEYSIISGNLHNYFHIETSLL 1966
Query: 59 -NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+E P +K +V+L LDRE A + L + A D G PP
Sbjct: 1967 GSESP---------------HQKSGALVLLHALDRE-ASASHRLVILASDHGCPP 2005
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
++P F D +++EN P+GTLV A D D +NS++ Y
Sbjct: 867 HSPSFQDGFIVISIEENVPVGTLVYVFNAKDGDGSFLNSRVQY 909
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAP FS Y VKE+ P+G+ IT+ +AD G +++I Y + G+ +F +++
Sbjct: 2022 NAPTFSSRQYHTHVKESTPVGSH-ITMVSADDRDTGSHAQIIYGIISGNEKEHFYLED 2078
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++P F YQ+ V+E+ +GT+V+ L A D D G+N ++ Y + + G F ID
Sbjct: 1290 HSPAFPMLHYQSAVREDAEVGTVVLVLSAVDKD-EGLNGQVEYFLM-EETSGAFAID 1344
Score = 36.2 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N PVF+ Y ++ P GT +I + A+D D G+ ++Y + GD FTID+
Sbjct: 112 NYPVFNPSTYVTSISGQTPPGTEIINVLASDRD-SGIYGTVAYELIPGDQSSLFTIDS 168
>gi|432951770|ref|XP_004084897.1| PREDICTED: protocadherin gamma-A9-like [Oryzias latipes]
Length = 695
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
NAPVFS VY+ T+ EN P TLVIT+ A DAD G+N+ ++Y D + F+ID+
Sbjct: 233 NAPVFSQDVYKTTLPENSPPETLVITVSATDAD-EGVNADVTYDFGHMSEDDVNVFSIDS 291
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 22/116 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PV +++ EN P GT V + D D N ++S S++G
Sbjct: 338 NPPVIYLKSLSSSIPENAPPGTEVGIINVQDRDS-DKNGQVSCSIQGN-----------A 385
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
P F++VP+ K Y++V LDRE+ YN+T+ A D+G+PP + K
Sbjct: 386 P---FKLVPSI------KNYYSVVSTGQLDRELVS-DYNITISATDEGSPPLSSSK 431
>gi|363738906|ref|XP_003642093.1| PREDICTED: protocadherin gamma-B1-like [Gallus gallus]
Length = 917
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 32/77 (41%), Positives = 44/77 (57%), Gaps = 20/77 (25%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY-------SVRGGDGLGY 54
NAPVF+ Y A ++EN P+G+LV+ ++AADAD G N ++SY SVR
Sbjct: 370 NAPVFNKNAYDAQMRENLPVGSLVLQVRAADAD-AGSNGRVSYFFGNVPESVR-----SL 423
Query: 55 FTIDNE-------GPLN 64
F+ID E GPL+
Sbjct: 424 FSIDAESGEVRTAGPLD 440
Score = 38.1 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVF + Y A V EN G V+ + A DAD G N ++SY
Sbjct: 580 NAPVFEEAAYSAYVPENNAAGEPVLRVSARDAD-AGANGRVSY 621
>gi|327270413|ref|XP_003219984.1| PREDICTED: protocadherin gamma-B5-like [Anolis carolinensis]
Length = 830
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR--GGDGLGYFTID 58
NAPVFS +Y+ ++KEN PIG V+ +KA+D+D G N++I+Y+ G FT+D
Sbjct: 240 NAPVFSQAIYKVSLKENAPIGMSVLQVKASDSD-EGSNAEITYTFSDIAEKGEQKFTLD 297
Score = 35.0 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 17/28 (60%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Query: 90 LDREIAPLGYNLTLRAVDKGTPPRETYK 117
LDRE P YN+T+ A+DKGTPP T+K
Sbjct: 412 LDRERVP-EYNITIIAMDKGTPPLSTHK 438
>gi|432958451|ref|XP_004086037.1| PREDICTED: protocadherin gamma-A7-like, partial [Oryzias latipes]
Length = 506
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVFS VY+A++ EN P+ T+V+T+ A DAD G+N +SY
Sbjct: 36 NAPVFSQAVYEASLPENSPLDTVVVTVSATDAD-EGVNGDVSY 77
Score = 38.5 bits (88), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 22/116 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+ S + EN P GT V + D D N ++ S++
Sbjct: 141 NAPIISLNSLSNYIPENAPPGTEVGIINVQDRDS-DKNGQVRCSIQAN-----------A 188
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
P F++VP+ K Y++V LDRE+ YN+T+ A D+G+PP + K
Sbjct: 189 P---FKLVPSI------KNYYSVVSTGQLDRELVS-DYNITISATDEGSPPLSSSK 234
>gi|257196299|gb|ACV49903.1| protocadherin gamma b3 [Anolis carolinensis]
Length = 226
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
NAPVFS +Y+ ++KEN PIG V+ +KA+D+D G+N++I+Y+
Sbjct: 34 NAPVFSQAMYKVSLKENVPIGMSVLQVKASDSD-EGLNAEITYT 76
>gi|301624872|ref|XP_002941722.1| PREDICTED: protocadherin Fat 2-like, partial [Xenopus (Silurana)
tropicalis]
Length = 1196
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ FV+ +V+EN P GT V+++ A D D G + ++ Y +R G L F+I+ E
Sbjct: 1032 LHTPYFNSFVFHGSVQENSPPGTQVLSITARDED-KGKDGEVRYLIRDGSDLSVFSINEE 1090
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G + E LDRE Y LT+ A D G+ P
Sbjct: 1091 --------------TGALRTE------APLDRESVS-HYWLTVYATDLGSIP 1121
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+APVF+ Y T EN P+G+ ++ + A+DAD G N I+Y++ G +
Sbjct: 508 HAPVFTKSSYHGTFNENIPVGSRILQVSASDAD-LGNNGNITYTLASPKGAPF------- 559
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V T ++LD E+ Y L + A D G+P R+
Sbjct: 560 EINQFTGVITN--------------KRMLDYELTQRWYRLRVWASDLGSPFRQ 598
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 45/102 (44%), Gaps = 15/102 (14%)
Query: 4 PVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-- 60
P F D F V E+ P+ +L+I L A D D G N + Y + G+ G F ID E
Sbjct: 764 PQFDDSFPASIDVAEDTPMYSLIIQLFATDTD-TGFNGHLVYVISEGNDDGCFVIDMETG 822
Query: 61 -----GPLNHFRIVP-----TKIDPGT-KKKEYNIVVLKLLD 91
PL+ R T D G +K + I+ + LLD
Sbjct: 823 KLMVSSPLDRERTASYILNATVYDLGVPQKSSWKILAVNLLD 864
>gi|195350165|ref|XP_002041612.1| GM16650 [Drosophila sechellia]
gi|194123385|gb|EDW45428.1| GM16650 [Drosophila sechellia]
Length = 2943
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 25/107 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTIDNEGPLNHFRIVP 70
+V+E QP GT V+ ++A D D G N+ I+YS+ R DG G F+ID + R+V
Sbjct: 666 SVREEQPPGTEVVRVRAVDRD-NGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVV- 723
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
LD E + Y L + A D G+PPRET +
Sbjct: 724 -------------------LDHEERSI-YRLGVAASDGGSPPRETVR 750
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NEG- 61
P+F Y VKE+ P GT+V ++ AA D S + YS+ GD GYF+I+ N G
Sbjct: 241 PIFEKARYNYYVKEDIPRGTVVGSVIAASGD-AAHRSPVRYSIYSGDPDGYFSIETNSGN 299
Query: 62 -----PLNH 65
PL+H
Sbjct: 300 IRIAKPLDH 308
Score = 38.5 bits (88), Expect = 0.78, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 14/112 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N PVF Y V E++ I +I + A+D D G N++I+Y + G D + +I +
Sbjct: 448 NPPVFEKEEYSVNVSESRSINAQIIQVNASDLD-TGNNARITYRIVDAGVDNVTN-SISS 505
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+HF I P I + LDRE A Y LT+ A D GTP
Sbjct: 506 SDVSHHFGIFPN---------SGWIYLRAPLDRE-ARDRYQLTILATDNGTP 547
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y +V+E+ P+ T V+ + A DAD G+N+++ YS+ + F ID++
Sbjct: 1347 NAPRFKLSKYTGSVQEDAPLSTSVVQISAVDAD-LGVNARLVYSL-ANETQWQFAIDSQS 1404
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
L I + LDRE+ YN + A D G
Sbjct: 1405 GL--------------------ITTVGKLDRELQA-SYNFMVLATDGG 1431
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P FS + ATV E GT V + A D+D G N+++ Y + G+ F I+
Sbjct: 1717 NSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSD-AGSNARLRYHIVDGNHDNAFVIEPA- 1774
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
IV T I +LDREI + Y L + A D+G P
Sbjct: 1775 ---FSGIVRTNI---------------VLDREIRDI-YKLKIIATDEGVP 1805
Score = 35.4 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 26/113 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ ++EN G++V + A+D D G N+ I YS+
Sbjct: 565 NDPKFQKSKYEFRIEENLRRGSVVGVVTASDLD-LGENAAIRYSLL-------------- 609
Query: 62 PLN-HFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P+N F++ P + T++ LDRE+ L Y+L + A D+GTP R
Sbjct: 610 PINSSFQVHPVTGEISTREP---------LDRELREL-YDLVVEARDQGTPVR 652
>gi|47212637|emb|CAF92949.1| unnamed protein product [Tetraodon nigroviridis]
Length = 255
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 51/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF +Y A V E G+ VI + A DAD N +SYS+ G N+G
Sbjct: 46 NAPVFGCQLYAAVVSEGAATGSSVIQVVAEDADSK-PNGAVSYSITSG---------NQG 95
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F IDP + N K LDRE P Y+L + A D G PP
Sbjct: 96 --NQF-----SIDPASGIVRVN----KDLDREAIP-SYSLAISARDGGIPP 134
>gi|390342985|ref|XP_798777.3| PREDICTED: cadherin-23-like, partial [Strongylocentrotus
purpuratus]
Length = 3673
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 22/110 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P FSD + + E +GT V + A D D P +++Y + G+ G
Sbjct: 553 PRFSDDEFTVFINEAAQVGTTVTRITATDEDIP-EGDRLTYIITAGNTGG---------- 601
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
HF+I P D + +L+ LDRE+ +NLT+RA D+G PP+
Sbjct: 602 -HFQINPVSGD---------VTLLRQLDRELES-QHNLTIRATDQGAPPQ 640
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F D Y+ ++ EN P+G+ ++T++A D D G+N+ + Y + G+ F +D +G
Sbjct: 968 NAPTFRDISYEESIFENHPLGSNILTVQADDPD-LGVNAVVLYRIISGNNNNLFNVDGQG 1026
Query: 62 PLN 64
+N
Sbjct: 1027 NIN 1029
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 24/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+++ VY+ ++ EN +IT+ D D P N YS+ GD +G F I++ G
Sbjct: 1391 NYPIWTRNVYEGSINENNFTSNPIITVMVNDLDLPSSN-NFEYSIIAGDPMGMFEINSNG 1449
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK-GTPPRET 115
I V LLDRE Y LT+ +D+ +PP T
Sbjct: 1450 ---------------------EITVSSLLDREQQET-YQLTIELIDQTNSPPART 1482
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 15/104 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG-------LGY 54
N PVF + T+ E++PIG V + A DAD G + +++YS+ GGDG G
Sbjct: 2253 NNPVFGAQSHTTTIIESEPIGAFVFNVNATDADSGG-SGRVTYSLIGGDGKFTINQDSGV 2311
Query: 55 FT----IDNEGPLNHFRIVPTKIDPGTKKKE---YNIVVLKLLD 91
T +D E H V + +PG + V++ +LD
Sbjct: 2312 ITLLQQVDKETQSQHMLTVFARDNPGDSEDSRTGSTTVIVNVLD 2355
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP +S Y ++ EN P+ T V+ + A DAD G N+ +S+++ + + F ID++G
Sbjct: 656 NAPQWSPQSYVDSILENVPLNTFVLQVVATDAD-QGTNADLSFTINNANNVP-FVIDDQG 713
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
NI L+RE P YN + +D G+P +
Sbjct: 714 ---------------------NIRTSGPLNRETVP-QYNFLVTVLDNGSPQQ 743
Score = 38.9 bits (89), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 2 NAPVFS----DFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N PVF D +Y+ ++ EN GT ++ + DAD G N+ ++YS+ G+ FTI
Sbjct: 438 NNPVFINRPIDNIYRGSINENDQTGTFIVQVSTTDAD-SGSNAAVTYSIISGNINNVFTI 496
Query: 58 D 58
+
Sbjct: 497 N 497
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF + Y T+ E P+G+ V T+ A D D N I+Y++ D GYF ID
Sbjct: 223 PVFINTPYDVTIPETLPVGSTVQTITATDPDSNDGN-IITYNLVVSDSQGYFVID 276
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 43/101 (42%), Gaps = 22/101 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
+ EN P+G L+I A D D G N + YS+ L +F ID
Sbjct: 2790 ITENNPLGLLIINAFAVD-DDVGANGVVDYSI----------------LPNFDYSDFTID 2832
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
P T +I +L DREI Y LT+ A D+G P T
Sbjct: 2833 PVTG----DITILVSADREIKD-SYTLTVVATDRGDPNLST 2868
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
P F Y TV EN+P GT V + D D + I Y++ G+GLG FTI++
Sbjct: 2570 PTFVPDQYSLTVTENEPPGTQVGVVITIDGDTLPEYTDIIYTILTGNGLGNFTINS 2625
>gi|313236913|emb|CBY12162.1| unnamed protein product [Oikopleura dioica]
Length = 937
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 5/58 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF + + +VKEN+PIGT + L A DAD +N +I+YS + +FTID+
Sbjct: 550 NAPVFENPSSKISVKENKPIGTFITQLSATDAD---LNDEINYSFK--TKTSFFTIDS 602
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 45/110 (40%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F VY + EN IG ++ + A D D G N++ISY + L F ID E
Sbjct: 446 NAPSFKHDVYNGEIAENNEIGDTIVQITAFDPD-FGKNAEISYEISEYKNL--FVIDPET 502
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
++ L D E+ P ++ + A D G+P
Sbjct: 503 A--------------------DLKALVSFDAELFPDPISINIIATDNGSP 532
>gi|432104659|gb|ELK31271.1| Cadherin-6 [Myotis davidii]
Length = 790
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 12/126 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P+F+ VY ATV E +GT+V+ + A DAD P G ++K+ YS+ G YF++++
Sbjct: 155 NEPIFTKEVYTATVPEMSDVGTVVVQVTATDADDPTYGNSAKVVYSILQGQ--PYFSVES 212
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTP--PR 113
E + + +D K++ ++ K + ++ L N+TL V+ P P+
Sbjct: 213 ETGI--IKTALFNMDRENKEQYQVVIQAKDMAGQMGGLSGTTTVNITLTDVNDNPPRFPQ 270
Query: 114 ETYKAT 119
TY+ T
Sbjct: 271 STYQFT 276
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ T E+ P GT + +KA DAD G N+ I YS+ G+GL F + +
Sbjct: 264 NPPRFPQSTYQFTTPESSPPGTSIGRIKATDAD-VGENAAIQYSITEGEGLDMFDVITDQ 322
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
I K+ KKK Y + V
Sbjct: 323 DTQEGIITVKKLLDFEKKKVYTLKV 347
>gi|403182344|gb|EAT48765.2| AAEL000246-PA [Aedes aegypti]
Length = 3468
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 41/111 (36%), Positives = 57/111 (51%), Gaps = 21/111 (18%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDNE 60
APVF + Y A+V E+ P+GT V+ + A D+D G+N++I+Y + +GLG NE
Sbjct: 897 APVFENAPYTASVFEDAPVGTTVLVVFATDSD-VGVNAQITYLLNDESVNGLG----SNE 951
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P I+P T I+ LDRE GY LT+ A D G P
Sbjct: 952 ---------PFSINPQTGA----IITNAPLDRETMS-GYLLTVTAKDGGNP 988
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P FS Y+AT+ E+QP GT V T+ A D P +S++ Y + G+ G F+I ++
Sbjct: 793 NDPTFSPKYYEATIAEDQPPGTPVTTVTATD---PDEDSRLHYEITAGNTRGRFSITSQ 848
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 52/111 (46%), Gaps = 23/111 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDNE 60
NAP F +YQAT+ E+ IGT V+ + A D D G+N +I Y++ D G F +D
Sbjct: 1006 NAPQFKVPLYQATIAEDALIGTSVVQIAATDID-MGLNGRIKYTLSSKDIEDGSFVVD-- 1062
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
PT T K LDRE + Y+L A DKGTP
Sbjct: 1063 ---------PTSGVIRTNKG---------LDRESIAI-YHLEAIASDKGTP 1094
Score = 41.6 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F +Q V E+ P+G ++ ++A D+D G NS+ISY+++ D DN
Sbjct: 688 NAPRFYTSQFQEAVLESVPVGYNIVRVQAYDSD-EGANSEISYNIQDRD-------DN-- 737
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+P +D T I K LDRE Y+ + A+D G PP+
Sbjct: 738 -------LPLAVDSRTGW----IHTTKPLDREERSR-YSFQVIAMDGGIPPK 777
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 24/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIG--TLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P FS+ Y V E+Q ++ ++A DAD G N+ I Y++ GG+ F+ID+
Sbjct: 581 NYPQFSERTYTVQVSEDQWTNENNVITHIQATDADQ-GNNAAIRYAIIGGNTQSQFSIDS 639
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
++ ++K LD E + Y L +RA D G+P R
Sbjct: 640 MSG--------------------DVSLVKPLDYE-SVRSYRLVIRAQDGGSPSR 672
Score = 38.9 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT-IDNEGP 62
P F V EN P+G++V + A D D G+N+ + YS+ GGD F+ + G
Sbjct: 1114 PTFPSDKITLYVPENSPVGSVVGEIHAHDPD-EGVNAIVHYSIIGGDDSNSFSLVTRPGS 1172
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVV 86
+ T++D + KK + +V+
Sbjct: 1173 ERAQLLTMTELDYESSKKRFELVI 1196
Score = 38.5 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 13/118 (11%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F + A+++E +G+ VIT++A D D G N+ I Y++ +G G T N
Sbjct: 464 HTPSFESEEFLASIREGVSVGSTVITIRATDQD-IGKNADIEYAILSINGDGSAT--NGQ 520
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
FRI + I LDRE + + Y L + A D T E AT
Sbjct: 521 DEQAFRI---------DARSGTISTRSALDRETSEM-YKLIVSASDMATLQTERRSAT 568
>gi|449274416|gb|EMC83599.1| Cadherin-7 [Columba livia]
Length = 785
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G N+++ Y + GDGLG F I
Sbjct: 258 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-VGPNAEMEYKIVDGDGLGVFKI---- 312
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+D T +E I + K LD E A Y L + A + PR
Sbjct: 313 ----------SVDKDT--QEGIITIQKELDFE-AKTSYTLRIEAANMHVDPR 351
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 24/111 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNEGP 62
PVF+ +Y V E +GT++ T+ A DP NS + YS+ R D YF ID
Sbjct: 375 PVFTSRLYSMVVSEAAKVGTIIGTVAA--HDPDASNSPVRYSIDRNTDLERYFNIDANSG 432
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I K LDRE + +N+T+ A++ P +
Sbjct: 433 V--------------------ITTAKSLDRETNAV-HNITVLAMESQNPAQ 462
>gi|307210796|gb|EFN87178.1| Protocadherin-like wing polarity protein stan [Harpegnathos
saltator]
Length = 3166
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 19/110 (17%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+PVF + Y +V E+ P+G V+ + A D+D G N++I+YS+ G E
Sbjct: 804 SPVFENAPYSVSVFEDAPVGVTVLVVSATDSD-VGKNAQITYSLATDSG--------EQA 854
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+N F I + I + LDRE+ Y LT+ A D G PP
Sbjct: 855 VNEFSI---------NSQTGAITTTRALDRELVS-SYLLTVTARDGGVPP 894
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 56/120 (46%), Gaps = 15/120 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F Y A+V+E P+G+ V+T+KA D D G N+++ YS+ G E
Sbjct: 362 HAPSFEWPEYDASVREGVPVGSTVVTVKATDQD-TGRNAEVEYSIVCTTAGGSTAHSEEA 420
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP--RETYKAT 119
+ FRI P + + LDRE + Y + L D+ TPP R + AT
Sbjct: 421 AI--FRIDP---------RSGVVTTRTALDREQTEV-YTVLLSVTDQATPPSARRSANAT 468
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF YQ ++ E+ +GT V+ + A DAD +N ++ Y++ DG G F ID
Sbjct: 911 NAPVFEAPQYQGSIPEDVLVGTSVLRVAATDAD-SDLNGRVKYALE-DDGDGAFAID--- 965
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
PT T K LDRE + Y+L A+D+G+P
Sbjct: 966 --------PTTGIVRTAKS---------LDRE-SVARYSLKAVAIDRGSP 997
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT 56
NAP F +Q +V EN P+G V+ ++A DAD G N+ I Y++ D G FT
Sbjct: 586 NAPRFYTSHFQESVSENVPLGYSVLRVQAYDAD-EGKNALIRYTIGARDVTGAFT 639
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 24/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGT--LVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P F++ Y A V E+ T +V ++A DAD G N+ + Y++ GG+ F+ID+
Sbjct: 479 NYPQFTERTYSAAVLEDLDYTTNPIVARIRATDADA-GSNAAVRYAIIGGNTQNTFSIDS 537
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
++ ++K LD E + Y + +RA D G+P R
Sbjct: 538 MSG--------------------DVALVKPLDYE-STRSYKIVIRAQDGGSPAR 570
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F Y+A V E+ P GT V ++ A D P +++I Y + GG+ G F+I ++
Sbjct: 700 NDPYFEPKNYEAVVSEDDPPGTPVTSVTATD---PDEDARIHYEITGGNTRGRFSIASQ 755
>gi|301762147|ref|XP_002916495.1| PREDICTED: protocadherin-20-like [Ailuropoda melanoleuca]
gi|281347222|gb|EFB22806.1| hypothetical protein PANDA_004564 [Ailuropoda melanoleuca]
Length = 952
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + + T++EN + L A DAD G ++SY + G D YF++D
Sbjct: 532 NAPVFLQPLLELTIEENNAPNAFLTKLYATDADS-GERGQVSYFL-GPDAPSYFSLDR-- 587
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ V T++D K+K Y T+RAVD G PPRE+
Sbjct: 588 -VTGILTVSTQLDREEKEK------------------YRYTVRAVDSGKPPRES 622
>gi|355691675|gb|EHH26860.1| hypothetical protein EGK_16932 [Macaca mulatta]
Length = 808
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 42/112 (37%), Positives = 55/112 (49%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ VY+ + EN GTLV+ L A+DAD G NS+I YS+ G D
Sbjct: 238 NEPTFAQSVYKVKLLENTANGTLVVKLNASDAD-EGSNSEIVYSL-GSD----------- 284
Query: 62 PLNHFRIVPTK--IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
F + TK IDP + + I + LD E A Y + + A DKGTP
Sbjct: 285 ---VFSTIQTKFTIDPSSGE----IRTMGKLDYEEAK-SYEIQVTATDKGTP 328
Score = 35.8 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F+ Y V+EN P G + T+ A DAD N+ +SYS+
Sbjct: 451 NAPAFAQSEYIVFVRENNPPGCHIFTVSAGDADAQ-ENALVSYSL 494
>gi|410932569|ref|XP_003979666.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-15-like
[Takifugu rubripes]
Length = 731
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 23/43 (53%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVFS VY+A++ EN P+ T+V+ + A DAD G+NS+I+Y
Sbjct: 234 NAPVFSQAVYKASLPENSPLDTVVMQVSATDAD-EGVNSEITY 275
Score = 36.2 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 14/108 (12%)
Query: 22 GTLVITLKAADADPP-----GMNSKISYSVRGGDGLGYFTIDNEGPLNHFRI-------V 69
TL+I + + + P + + V G +G + + N+ ++ V
Sbjct: 327 ATLMIEITDVNDNAPVIQLKSLTDPVPEDVSPGSEVGIINVQDRDSENNRQVRCSIQQNV 386
Query: 70 PTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
P K+ P K Y++V LDRE+ YN+T+ A D+G+PP + K
Sbjct: 387 PFKLVPSIKNY-YSLVTTGQLDRELVS-DYNITISATDEGSPPLSSSK 432
>gi|120538455|gb|AAI29808.1| Protocadherin alpha 3 [Homo sapiens]
Length = 824
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 25/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR---GGDGLGYFTID 58
NAP F +Y+ + EN P GTLV+T+ A D D G+N I+YS D L F +D
Sbjct: 238 NAPAFERTIYKVRLLENAPNGTLVVTVNATDLD-EGVNKDIAYSFNTDMSADTLSKFHLD 296
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+N V ID K Y + + A DKG PP
Sbjct: 297 ---PVNGQISVKGNIDFEESKS------------------YEIQVEATDKGNPP 329
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP FS Y VKEN P G + T+ A DAD N+ +SYS+
Sbjct: 451 NAPAFSQSEYTVFVKENNPPGCHIFTVSARDADAQ-ENALVSYSL 494
Score = 35.8 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF V + E++ G+ A+DAD G NS ++YS+ D YFT+D +
Sbjct: 129 NAPVFPMAVKNLFISESRQPGSRFSLEGASDAD-IGTNSLLTYSL---DSTEYFTLDVK- 183
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
N I K +V+ K L+RE P Y L + A+D G P
Sbjct: 184 -RNDEEI-----------KSLGLVLKKNLNREDTPKHY-LLITAIDGGKP 220
>gi|157123386|ref|XP_001660147.1| cadherin [Aedes aegypti]
Length = 3478
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 41/111 (36%), Positives = 57/111 (51%), Gaps = 21/111 (18%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDNE 60
APVF + Y A+V E+ P+GT V+ + A D+D G+N++I+Y + +GLG NE
Sbjct: 897 APVFENAPYTASVFEDAPVGTTVLVVFATDSD-VGVNAQITYLLNDESVNGLG----SNE 951
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P I+P T I+ LDRE GY LT+ A D G P
Sbjct: 952 ---------PFSINPQTGA----IITNAPLDRETMS-GYLLTVTAKDGGNP 988
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P FS Y+AT+ E+QP GT V T+ A D P +S++ Y + G+ G F+I ++
Sbjct: 793 NDPTFSPKYYEATIAEDQPPGTPVTTVTATD---PDEDSRLHYEITAGNTRGRFSITSQ 848
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 52/111 (46%), Gaps = 23/111 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDNE 60
NAP F +YQAT+ E+ IGT V+ + A D D G+N +I Y++ D G F +D
Sbjct: 1006 NAPQFKVPLYQATIAEDALIGTSVVQIAATDID-MGLNGRIKYTLSSKDIEDGSFVVD-- 1062
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
PT T K LDRE + Y+L A DKGTP
Sbjct: 1063 ---------PTSGVIRTNKG---------LDRESIAI-YHLEAIASDKGTP 1094
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F +Q V E+ P+G ++ ++A D+D G NS+ISY+++ D DN
Sbjct: 688 NAPRFYTSQFQEAVLESVPVGYNIVRVQAYDSD-EGANSEISYNIQDRD-------DN-- 737
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+P +D T I K LDRE Y+ + A+D G PP+
Sbjct: 738 -------LPLAVDSRTGW----IHTTKPLDREERSR-YSFQVIAMDGGIPPK 777
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 24/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIG--TLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P FS+ Y V E+Q ++ ++A DAD G N+ I Y++ GG+ F+ID+
Sbjct: 581 NYPQFSERTYTVQVSEDQWTNENNVITHIQATDADQ-GNNAAIRYAIIGGNTQSQFSIDS 639
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
++ ++K LD E + Y L +RA D G+P R
Sbjct: 640 MSG--------------------DVSLVKPLDYE-SVRSYRLVIRAQDGGSPSR 672
Score = 38.9 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT-IDNEGP 62
P F V EN P+G++V + A D D G+N+ + YS+ GGD F+ + G
Sbjct: 1114 PTFPSDKITLYVPENSPVGSVVGEIHAHDPD-EGVNAIVHYSIIGGDDSNSFSLVTRPGS 1172
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVV 86
+ T++D + KK + +V+
Sbjct: 1173 ERAQLLTMTELDYESSKKRFELVI 1196
Score = 38.5 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 13/118 (11%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F + A+++E +G+ VIT++A D D G N+ I Y++ +G G T N
Sbjct: 464 HTPSFESEEFLASIREGVSVGSTVITIRATDQD-IGKNADIEYAILSINGDGSAT--NGQ 520
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
FRI + I LDRE + + Y L + A D T E AT
Sbjct: 521 DEQAFRI---------DARSGTISTRSALDRETSEM-YKLIVSASDMATLQTERRSAT 568
>gi|432958328|ref|XP_004085981.1| PREDICTED: protocadherin gamma-A6-like, partial [Oryzias latipes]
Length = 429
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVFS VY+A++ EN P+ T+V+T+ A DAD G+N +SY
Sbjct: 10 NAPVFSQAVYEASLPENSPLDTVVVTVSATDAD-EGVNGDVSY 51
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 22/116 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+ S +++ EN P GT V + D D N ++S S++
Sbjct: 115 NAPIISLKSLSSSIPENAPPGTEVGIINVQDRDS-DKNGQVSCSIQAN-----------A 162
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
P F++VP+ K Y++V LDRE+ YN+T+ A D+G+PP + K
Sbjct: 163 P---FKLVPSI------KNYYSVVSKGQLDRELVS-DYNITISATDEGSPPLSSSK 208
>gi|410947508|ref|XP_003980488.1| PREDICTED: protocadherin-20 [Felis catus]
Length = 952
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F + + T++EN + L A DAD G ++SY + G D YF++D+
Sbjct: 532 NAPIFLQPLLELTIEENNAPNAFLTKLYATDADS-GERGQVSYFL-GPDAPSYFSLDS-- 587
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ V T++D K+K Y T+RAVD G PPRE+
Sbjct: 588 -VTGILTVSTQLDREEKEK------------------YRYTVRAVDSGKPPRES 622
>gi|348546077|ref|XP_003460505.1| PREDICTED: protocadherin gamma-C3-like, partial [Oreochromis
niloticus]
gi|348546099|ref|XP_003460516.1| PREDICTED: protocadherin gamma-C3-like, partial [Oreochromis
niloticus]
Length = 356
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 39/67 (58%), Gaps = 10/67 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY+ATV EN P T VIT+ A+DAD G NS ++Y YF+ N G
Sbjct: 213 NAPVFNQSVYKATVMENSPRDTYVITVNASDAD-FGSNSIVTY---------YFSDLNSG 262
Query: 62 PLNHFRI 68
N F I
Sbjct: 263 LSNLFII 269
>gi|9965298|gb|AAG10032.1|AF282973_3 protocadherin-beta9 [Homo sapiens]
Length = 536
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 20/108 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ +Y+ EN P+G+L++ + A DAD G+N+++SYS F +E
Sbjct: 238 NAPQFAQALYETQAPENSPVGSLIVKVSAGDAD-SGVNAEVSYS---------FFDASED 287
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
L F+I P + I + +LLD E+ Y + ++A+D G
Sbjct: 288 ILTTFQINPFSGE---------IFLRELLDYELVN-SYKINIQAMDGG 325
>gi|119514234|gb|ABL75897.1| protocadherin 2G22 [Takifugu rubripes]
Length = 957
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL--GYFTID 58
N+PVF+ VY+A+VKEN P GT +IT+ A DAD G N I YS G F ID
Sbjct: 245 NSPVFNQTVYKASVKENAPKGTFIITVNATDAD-SGSNGLIYYSFSKMQGSIDSVFEID 302
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVF VY A + EN G V+TL+A D D N++ISY
Sbjct: 455 NAPVFPQAVYSAPIVENNSPGVSVLTLRAKDPD-ENQNARISY 496
>gi|57528885|ref|NP_001009592.1| protocadherin 2 alpha b2 [Danio rerio]
gi|53748789|dbj|BAD52306.1| cadherin-related neuronal receptor variable 2 [Danio rerio]
gi|53748804|dbj|BAD52319.1| cadherin-related neuronal receptor variable 2 [Danio rerio]
Length = 944
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 39/115 (33%), Positives = 54/115 (46%), Gaps = 19/115 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF +Y+A + EN IG VIT+ A DAD G+N ++ YS + DNE
Sbjct: 240 NIPVFDKPLYKARIAENSAIGASVITVSAKDAD-EGLNGEVIYS--------FINHDNEN 290
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+N F I P + I V LD E + ++A DKG PR ++
Sbjct: 291 SINAFLINPNTGE---------ITVKGPLDYE-ENAAIEIRVQAEDKGQNPRASH 335
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 26/113 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLV--ITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P S V+E+ GT+V IT+K DA G N + +R F ++N
Sbjct: 348 NTPEISIMSLVNEVREDSAPGTMVGLITVKDGDA---GKNGVVRLQIRDS---AQFRLEN 401
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
T K +++VV LDRE+A YN+T+ A D+G+PP
Sbjct: 402 -----------------TYKNRFSLVVNGPLDREVAS-EYNVTISAADEGSPP 436
Score = 35.4 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F + V VKEN IG ++ T+ A D D G N++I+YS+
Sbjct: 453 NAPRFPEPVINVYVKENSQIGAVLHTVSAVDPD-VGDNARITYSL 496
>gi|307190373|gb|EFN74432.1| Cadherin-related tumor suppressor [Camponotus floridanus]
Length = 1810
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
+ PVF Y A + E P G+ V ++ A DAD G+N+++ Y++ G+ LG+F ID
Sbjct: 511 HEPVFQQSEYSAVLSELAPNGSFVASISATDAD-SGLNAQVYYNLESGNNLGWFAID 566
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 17/101 (16%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
ATV EN T+V + D D G+N + S +R G+ LG+F +++ + R+ K
Sbjct: 412 ATVDENANEDTIVAAMTITD-DDQGLNGETSVEIRAGNELGHFRLEDRHTVT--RVTLVK 468
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I+ LDRE P YNLT+ A DKG P R
Sbjct: 469 IN-------------GRLDREEVPT-YNLTIVASDKGIPSR 495
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 51/118 (43%), Gaps = 22/118 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ V E IGT ++ + DAD G+N + YS+ G+ G+F ID
Sbjct: 1254 NVPQFQRLPYRVQVSEGAVIGTQLLRVYTTDAD-KGLNGDVFYSLEDGNQHGHFIID--- 1309
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I ++K LDRE + Y LT+ A D G R + AT
Sbjct: 1310 -----------------EATGQISLVKELDRETSDT-YVLTVVAHDAGLETRLSSSAT 1349
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 49/114 (42%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF Y+ ++ E+ P+ +L A DAD G+N KI YSV G+ F I +G
Sbjct: 1041 HTPVFRLTSYEISLSESTPVNKRFFSLIAHDAD-LGVNGKIRYSVTDGNVESSFGIFPDG 1099
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
L V +LDRE Y L + A D+G P R +
Sbjct: 1100 QL---------------------YVKNMLDREERDY-YALEVTAFDQGNPSRSS 1131
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 14/110 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN-- 59
N+PVF + Y + E+ P GT++ + A DAD N++I Y + G G G F ID
Sbjct: 724 NSPVFYPWKYLMPISEDSPAGTIIGKVTATDADAR-ENAQIKYILESG-GEGLFVIDERT 781
Query: 60 -----EGPLNH-----FRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGY 99
+G L + + + D G + + N +V + D ++ L +
Sbjct: 782 GEIALQGSLRAAHKTLYELTISAKDTGDRFADRNAIVEIIRDEDLEHLEF 831
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N PVF Y ++ E+ P+GT V+T+ A D D NSK++Y + D FTID E
Sbjct: 285 NPPVFQQSDYVVSLNESAPVGTKVLTVHATDKDSED-NSKLTYYL--PDDERKFTIDPE 340
>gi|190339716|gb|AAI63284.1| Protocadherin 2 alpha b2 [Danio rerio]
Length = 944
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 39/115 (33%), Positives = 54/115 (46%), Gaps = 19/115 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF +Y+A + EN IG VIT+ A DAD G+N ++ YS + DNE
Sbjct: 240 NIPVFDKPLYKARIAENSAIGASVITVSAKDAD-EGLNGEVIYS--------FINHDNEN 290
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+N F I P + I V LD E + ++A DKG PR ++
Sbjct: 291 SINAFLINPNTGE---------ITVKGPLDYE-ENAAIEIRVQAEDKGQNPRASH 335
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 26/113 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLV--ITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P S V+E+ GT+V IT+K DA G N + +R F ++N
Sbjct: 348 NTPEISIMSLVNEVREDSAPGTMVGLITVKDGDA---GKNGVVRLQIRDS---AQFRLEN 401
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
T K +++VV LDRE+A YN+T+ A D+G+PP
Sbjct: 402 -----------------TYKNRFSLVVNGPLDREVAS-EYNVTISAADEGSPP 436
Score = 35.4 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F + V VKEN IG ++ T+ A D D G N++I+YS+
Sbjct: 453 NAPRFPEPVINVYVKENSQIGAVLHTVSAVDPD-VGDNARITYSL 496
>gi|50982543|gb|AAT91876.1| protocadherin cluster 2 alpha 27 [Danio rerio]
Length = 944
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 39/115 (33%), Positives = 54/115 (46%), Gaps = 19/115 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF +Y+A + EN IG VIT+ A DAD G+N ++ YS + DNE
Sbjct: 240 NIPVFDKPLYKARIAENSAIGASVITVSAKDAD-EGLNGEVIYS--------FINHDNEN 290
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+N F I P + I V LD E + ++A DKG PR ++
Sbjct: 291 SINAFLINPNTGE---------ITVKGPLDYE-ENAAIEIRVQAEDKGQNPRASH 335
Score = 38.9 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 26/113 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLV--ITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P S VKE+ GT+V IT+K DA G N + +R F ++N
Sbjct: 348 NTPEISIMSLVNEVKEDSAPGTMVGLITVKDGDA---GKNGVVRLQIRDS---AQFRLEN 401
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
T K +++VV LDRE+A YN+T+ A D+G+PP
Sbjct: 402 -----------------TYKNRFSLVVNGPLDREVAS-EYNVTISAADEGSPP 436
Score = 36.2 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F + V VKEN IG ++ T+ A D D G N+KI+YS+
Sbjct: 453 NAPRFPEPVINVYVKENSQIGAVLHTVSAVDPD-VGDNAKITYSL 496
>gi|24580686|ref|NP_523446.2| dachsous [Drosophila melanogaster]
gi|22945533|gb|AAF51468.3| dachsous [Drosophila melanogaster]
Length = 3556
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 26/120 (21%)
Query: 2 NAPVFSDFVYQA-TVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTI 57
NAP +D +V+E QP GT V+ ++A D D G N+ I+YS+ R DG G F+I
Sbjct: 1252 NAPEIADPQEDVVSVREEQPPGTEVVRVRAVDRD-HGQNASITYSIVKGRDSDGHGLFSI 1310
Query: 58 DNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
D + R+V LD E + Y L + A D G PPRET +
Sbjct: 1311 DPTSGVIRTRVV--------------------LDHEERSI-YRLGVAASDGGNPPRETVR 1349
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT 56
N P+F Y +V EN+P+G ++ + A+D D G+N+ ++Y++ G+G + T
Sbjct: 607 NEPIFDQSFYNVSVAENEPVGRCILKVSASDPD-CGVNAMVNYTI--GEGFKHLT 658
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y +V+E+ P+GT V+ + A DAD G+N+++ YS+ + F ID +
Sbjct: 1948 NAPRFKLSKYTGSVQEDAPLGTSVVQISAVDAD-LGVNARLVYSL-ANETQWQFAIDGQS 2005
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
L I + LDRE+ YN + A D G
Sbjct: 2006 GL--------------------ITTVGKLDRELQA-SYNFMVLATDGG 2032
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NEG- 61
P+F Y VKE+ P GT+V ++ AA D S + YS+ GD GYF+I+ N G
Sbjct: 825 PIFEKARYNYYVKEDIPRGTVVGSVIAASGD-VAHRSPVRYSIYSGDPDGYFSIETNSGN 883
Query: 62 -----PLNH 65
PL+H
Sbjct: 884 IRIAKPLDH 892
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 50/112 (44%), Gaps = 14/112 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N PVF Y V E++ I +I + A+D D G N++I+Y + G D + +I +
Sbjct: 1032 NPPVFEKDEYSVNVSESRSINAQIIQVNASDLD-TGNNARITYRIVDAGVDNVTN-SISS 1089
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
HF I P I + LDRE Y LT+ A D GTP
Sbjct: 1090 SDVSQHFGIFPN---------SGWIYLRAPLDRETRDR-YQLTVLATDNGTP 1131
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 16/112 (14%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
V +NQP T+ + + DA P KIS S + G+ + ++ + + V ++
Sbjct: 386 VNDNQP--TINVIFLSDDASP-----KISESAQPGEFVARISVHDPDSKTEYANVNVTLN 438
Query: 75 PG-------TKKKEYNIVVLKL-LDREIAPLGYNLTLRAVDKGTPPRETYKA 118
G T+ +V++ L LDREI Y L++ A DKGTPP K+
Sbjct: 439 GGDGHFALTTRDNSIYLVIVHLPLDREIVS-NYTLSVVATDKGTPPLHASKS 489
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P FS + ATV E GT V + A D+D G N+++ Y + G+ F I+
Sbjct: 2318 NSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSD-AGSNARLRYHIVDGNHDNAFVIEPA- 2375
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
IV T I +LDREI + Y L + A D+G P
Sbjct: 2376 ---FSGIVRTNI---------------VLDREIRDI-YKLKIIATDEGVP 2406
Score = 35.8 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 50/116 (43%), Gaps = 24/116 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P+F+ Y ATV EN +GT V+ + A+D D N + Y++ R D F
Sbjct: 282 NQPIFNQSRYFATVPENATVGTSVLQVYASDTD-ADENGLVEYAINRRQSDKEQMF---- 336
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+IDP T I + K LD E L + L + A D G P ET
Sbjct: 337 ------------RIDPRTGA----IYINKALDFETKEL-HELVVVAKDHGEQPLET 375
Score = 35.4 bits (80), Expect = 8.2, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 26/113 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ ++EN G++V + A+D D G N+ I YS+
Sbjct: 1149 NDPKFQKSKYEFRIEENLRRGSVVGVVTASDLD-LGENAAIRYSLL-------------- 1193
Query: 62 PLN-HFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P+N F++ P + T++ LDRE+ L Y+L + A D+GTP R
Sbjct: 1194 PINSSFQVHPVTGEISTREP---------LDRELREL-YDLVVEARDQGTPVR 1236
>gi|157649906|gb|ABV59331.1| protocadherin epsilon13 [Callorhinchus milii]
Length = 801
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 25/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD---GLGYFTID 58
NAPVF Y +++EN P GT+VI + A D D G N+++ YS G F +D
Sbjct: 232 NAPVFDHETYSTSIQENTPKGTVVIQINAVDLD-SGANAEVKYSFSSHSSDRGRKLFQLD 290
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+E I V +L+ E+A + Y L ++A DKGT P
Sbjct: 291 SETG--------------------EIKVQSVLNFEVANV-YELYVQATDKGTTP 323
>gi|410913751|ref|XP_003970352.1| PREDICTED: protocadherin gamma-A5-like [Takifugu rubripes]
Length = 814
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL--GYFTID 58
N+PVF+ VY+A+VKEN P GT +IT+ A DAD G N I YS G F ID
Sbjct: 245 NSPVFNQTVYKASVKENAPKGTFIITVNATDAD-SGSNGLIYYSFSKMQGSIDSVFEID 302
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVF VY A + EN G V+TL+A D D N++ISY
Sbjct: 455 NAPVFPQAVYSAPIVENNSPGVSVLTLRAKDPD-ENQNARISY 496
>gi|242014336|ref|XP_002427847.1| protocadherin-16 precursor, putative [Pediculus humanus corporis]
gi|212512316|gb|EEB15109.1| protocadherin-16 precursor, putative [Pediculus humanus corporis]
Length = 5078
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 47/118 (39%), Gaps = 23/118 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F Y V EN IGT V+T+ A D D G N I Y + GD I N G
Sbjct: 1967 NAPLFDPMSYNNEVFENVTIGTNVVTVSATDLD-SGQNGAIEYKIISGDENEDLAIANNG 2025
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
I +K LDRE YNL + D PP++ +T
Sbjct: 2026 ---------------------TIYTVKELDRETKS-AYNLVVTGTDLAEPPQQRLSST 2061
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 55/115 (47%), Gaps = 28/115 (24%)
Query: 2 NAPVFSDFVYQATVKEN---QPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTI 57
N PVF D Y A V EN P G +T++A+DAD P N ++ Y ++ GD GL
Sbjct: 2285 NPPVFLDSPYYAYVMENTVPSPDGYF-LTVRASDADSPQYNGQVRYFLKEGDAGL----- 2338
Query: 58 DNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
FRI + D + + + LDRE Y LTL A+D GTPP
Sbjct: 2339 --------FRINASTGD---------LYLSRPLDRE-KQSEYLLTLVAMDTGTPP 2375
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F+ VY+A + EN P T + ++A D D P N+ I YS+ G G FTID++
Sbjct: 3238 NPPTFNQSVYKAYIPENSPPKTFIFQVQAHDIDSP-KNAIIHYSIIRGTGKDVFTIDSK 3295
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F +++ +V E P+ T + KA D D G+NS+IS+S+ G+ F ID
Sbjct: 1331 NAPEFVQTMFEISVPETTPVNTKLTQFKAIDMD-IGINSEISFSIGAGNRRDTFHID--- 1386
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
PT GT + + KLLD E Y LT+ A D G P
Sbjct: 1387 --------PTS---GT------LYLHKLLDYEELN-SYTLTIVASDGGNP 1418
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N P F+ Y +++ ++ ++ +KA D GMN++I YS+ GG+G YF I+ +
Sbjct: 3026 NPPKFTKSQYFSSLPKSADYEQKILQVKATDEQDFGMNAEIDYSISGGNGSNYFNINEKT 3085
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G L R NI V K+L R Y + ++A D+G PP
Sbjct: 3086 GWLTVSRA--------------NIPV-KVLSR------YVINVKATDRGVPP 3116
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 48/110 (43%), Gaps = 21/110 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y+ V E+ G ++ T+KA D D +N++ SYS+ G+ F
Sbjct: 3450 PEFLQQEYETRVPEDVRPGKIITTVKAIDKDVRPLNNQFSYSIINGNSEKAF-------- 3501
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
KIDP T E LDRE P Y L + A+D G PP+
Sbjct: 3502 --------KIDPQTGAIE----TAAELDREKIP-AYTLIIGAIDTGVPPQ 3538
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N+P+F Y A++ EN IG V+ + A D D G+N K+ YS+ GD F+I +
Sbjct: 2176 NSPMFDPKHYSASIAENASIGASVLQVSATDVD-EGLNGKVRYSIFSGDENRDFSISED 2233
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 50/103 (48%), Gaps = 23/103 (22%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
ATV EN GT+V + D D G+N + + ++ G+ LNHFR+ T
Sbjct: 391 ATVDENAMNGTVVAAVTVVDEDE-GLNGETTVVIKAGN-----------ELNHFRLDST- 437
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
P + V +LDRE YNLT+ A DKGTPPR +
Sbjct: 438 --PAVR-------VNGVLDREEIS-KYNLTIVATDKGTPPRSS 470
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
+PVF +Q + EN P+G+ ++T+KA D D G N + Y + G+ F +++
Sbjct: 3134 SPVFPALSFQVIIPENDPVGSTILTIKATD-DDDGPNGMVEYKISSGNEDSKFHLNS 3189
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++PVF Y A++ EN PIG V A D D G+N+KI YS G + +N G
Sbjct: 2392 HSPVFERQSYVASIMENSPIGYFVTQPVATDQD-DGLNAKIKYSFFGDKADRFHLEENTG 2450
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 19/113 (16%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS T+ E+ P TLV L A+D+D G N ++Y + F+ GP
Sbjct: 590 SPKFSQDQINVTLLEDTPPNTLVAILTASDSD-QGTNGSVAYFLD-----AEFSPKYSGP 643
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+D T + + LDREI P Y + + A D+G PPR +
Sbjct: 644 F--------ALDSLTGQ----LTTKSYLDREITPY-YEIKVIAKDQGVPPRSS 683
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 47/115 (40%), Gaps = 18/115 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F F Y E+Q V + A D D G NS ISYS++
Sbjct: 2915 NAPEFEHFDYSFNFPESQSSVIFVGQVIATDRDKHGANSVISYSLKH------------- 2961
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVDKGTPPRET 115
P + F I P + +K+ + K E +P Y LT+ A D G PP +
Sbjct: 2962 PSDIFTIDPASGEIFSKRP----LRYKYTALEHSPENQYTLTVLATDNGKPPMSS 3012
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 24/104 (23%)
Query: 12 QATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPT 71
+ +V EN P+ T+V+ +KA D D G NS + YS+ D F++ G ++
Sbjct: 2083 KTSVSENIPLNTVVLAIKAIDKD-EGRNSYLEYSLY--DPTKTFSV---GTIDGL----- 2131
Query: 72 KIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ V+ LDRE Y+L + A DKG PPR T
Sbjct: 2132 ------------LRVVGKLDRETVA-NYSLEVVAKDKGDPPRYT 2162
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 16/113 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTID-- 58
N+P F Y V EN G V+ + A D D G NS++ YS+ G D L F I+
Sbjct: 697 NSPEFYPLKYFTIVSENIATGNKVLQVFAHDLD-EGKNSELKYSIESGHDDL--FNINPK 753
Query: 59 ----------NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNL 101
+ P F +V + D G +K N +V + + + L +N+
Sbjct: 754 TGEIHVLSSLKQTPKGLFELVISVKDAGGRKCSENAIVEIMKENHLISLEFNM 806
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFSD Y V EN GT V + A D D G+N ++SY V F+++++
Sbjct: 1862 NPPVFSDNAYSFDVPENTIRGTRVGEIMATDED-EGINGQVSYQVISDWANDVFSLNSQS 1920
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTL 103
+ + T++D ++ ++ I V++ D L LT+
Sbjct: 1921 GV---FTLTTRLD--YEEVQHYIFVVQAQDSGKPSLSSTLTV 1957
>gi|403283170|ref|XP_003933000.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1, partial
[Saimiri boliviensis boliviensis]
Length = 2759
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 24/110 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF Y +V E++P+GT + TL A D D G N++I+Y + + P+
Sbjct: 584 PVFQSSHYTVSVSEDRPVGTSIATLSANDED-TGENARITYVI-------------QDPV 629
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
FRI P D GT + + LD E + Y LT+ A+D G P +
Sbjct: 630 PQFRIDP---DSGT------MYTMMELDYE-HQVAYTLTITALDNGIPQK 669
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F +QATV EN P+G V+ ++A DAD G N+++ Y + + + G
Sbjct: 358 NEPIFVSSPFQATVLENVPLGYSVVHIQAVDAD-SGENARLRYRLV-DTASAFLGGGSAG 415
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVL-KLLDREIAPLGYNLTLRAVDKGTPP 112
P N VP P + L LDRE Y+ + AVD G+PP
Sbjct: 416 PKNP---VPAPDFPFQIHNSSGWITLCAELDREEVE-HYSFGVEAVDHGSPP 463
Score = 42.0 bits (97), Expect = 0.084, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP+F + V+EN P+G++V ++A D D G N++I Y + GD +F +D
Sbjct: 792 NAPMFEKDELELFVEENNPVGSVVAKIRAQDPD-EGPNAQIMYQIVEGDMRHFFQLD 847
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N PVF+ Y+ + E+ +G+ V+TL+A D D NS I+Y + GG+ F + ++
Sbjct: 480 NDPVFTQPTYELRLNEDAAVGSSVLTLQARDRDA---NSVITYQLTGGNTRNRFALSSQ 535
Score = 38.1 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG 49
++PVF Y+ V+EN +G V+T++A+D D P +N+ + Y + GG
Sbjct: 146 HSPVFEQSEYRERVRENLEVGYEVLTIRASDRDSP-VNANMRYRMLGG 192
>gi|291244988|ref|XP_002742375.1| PREDICTED: hedgling-like [Saccoglossus kowalevskii]
Length = 2697
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P FS Y A EN +GT V + A D D G N I YS+ G G GYF+I ++
Sbjct: 2012 NSPAFSQMQYVADTDENIAVGTSVTQVVATDRD-IGTNDDIVYSIIAGLGQGYFSIQSDT 2070
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++ T D +D E+ L Y+ ++AVD G+P + +Y
Sbjct: 2071 G-----VINTASD---------------IDAELMSL-YSFHIQAVDGGSPQKTSY 2104
Score = 42.4 bits (98), Expect = 0.054, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PV Y ++ E+ IG +V + A D D G N+++SYS G+ LG+F ID +
Sbjct: 2215 NPPVIDQASYSESIPEDSYIGLVVCDVDATDEDI-GANARLSYSFSSGNELGHFAIDTDT 2273
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ I + LD E A + Y L + D GTP
Sbjct: 2274 GI--------------------ITIDSELDHE-AVVSYVLAVTVSDNGTP 2302
Score = 40.0 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLG--YFTIDN 59
N+PVF+ VY+ + EN P+GT V + A D D +N+ I YS+ + YF +D+
Sbjct: 2426 NSPVFTLDVYETQLTENSPVGTSVTVISATDID-QDINADIRYSIPASQIIANEYFKVDS 2484
Score = 40.0 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
P+F+ Y V EN GTLV T+ A D D N +I YS+ G+ L +F ID++
Sbjct: 2322 PLFTMETYTFNVLENSAAGTLVNTIVATDLD-EAENGRIIYSIVSGENLNHFAIDSD 2377
Score = 36.2 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 22/102 (21%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
ATV EN GT V T+ A+D D G++ ++++++GGD F ID+ L
Sbjct: 860 ATVSENTSPGTSVATVIASD-DDSGVDGIVNFAIQGGDINDNFQIDSSSGL--------- 909
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP-PR 113
+ V ++D E+ LT++ D+G+P PR
Sbjct: 910 -----------LEVKSVIDYEVTGSPITLTIKLSDEGSPTPR 940
>gi|66773258|ref|NP_001019349.1| protocadherin 2 gamma 5 precursor [Danio rerio]
gi|51557473|gb|AAU06422.1| protocadherin cluster 2 gamma 5 [Danio rerio]
Length = 935
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 14/103 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY--SVRGGDGLGYFTIDN 59
NAPVFS VY+ ++ EN P+ T+V+T+ A DAD G N +++Y S + F ID+
Sbjct: 226 NAPVFSQAVYKVSLPENSPVDTVVVTVSATDAD-EGQNGEVTYEFSHLSQKVMQLFVIDS 284
Query: 60 -------EGPLNHFR----IVPTKIDPGTKKKEYNIVVLKLLD 91
GP+++ + +P + G Y+ V++ ++D
Sbjct: 285 VSGVIKLTGPVDYEKEKTIELPIQAKDGQGLSSYSTVLIDIID 327
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 50/112 (44%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F V + E+ G+ + +A DAD GMNS SY+++ +
Sbjct: 117 NSPQFKKTVNKFETSESAVKGSRYLLDEAHDADI-GMNSVQSYTLQNNE----------- 164
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
HF + G K E +V+ K LDRE L L AVD GTPPR
Sbjct: 165 ---HFLLNVLTRSNGRKHGE--LVLNKELDRE-QQKEVTLILTAVDGGTPPR 210
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 37 GMNSKISYSVRGGDGLGYFTIDNEGPLNHFRI-------VPTKIDPGTKKKEYNIVVLKL 89
+NS + S G +G + + N+ ++ VP K+ P K Y++V
Sbjct: 339 SLNSPVPESALPGTEVGIINVQDRDSENNGQVRCSIQQNVPFKLVPSIKNY-YSLVTTGE 397
Query: 90 LDREIAPLGYNLTLRAVDKGTPPRETYK 117
LDRE+ YN+T+ A D+G+PP + K
Sbjct: 398 LDRELLS-EYNITITATDEGSPPLSSTK 424
>gi|66773240|ref|NP_001019359.1| protocadherin 2 gamma 16 precursor [Danio rerio]
gi|51557427|gb|AAU06400.1| protocadherin cluster 2 gamma 16 [Danio rerio]
Length = 947
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTID- 58
NAPVF+ VY+A+V EN P GT + T+ A DAD G N +I+Y+ + G F ID
Sbjct: 237 NAPVFNQTVYRASVMENAPKGTYITTVNATDAD-SGSNGRITYNFYKQKGAAAQLFNIDS 295
Query: 59 NEGPLNHF 66
N G ++ F
Sbjct: 296 NTGIISVF 303
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 22/116 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPV + + +TV E+ P T + + DAD N ++S + G +
Sbjct: 342 NAPVINAMSFSSTVSEDAPPDTTIAIINVKDADTDD-NGRVSCFIEGSEDF--------- 391
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ T + Y++V +LDRE YN+T+ A D G PP + K
Sbjct: 392 -----------VVKSTLRNYYSLVTNVILDREKLS-EYNITVIATDSGKPPLTSRK 435
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + VY + + EN G ++ ++A D D N++ISY + D LG F +
Sbjct: 447 NAPVFRERVYNSYLPENNSPGVSILRIRAHDPD-ENQNARISYILEESD-LGGFPVGTYV 504
Query: 62 PLNHFRIVPTKIDPGTKKKEYNI-VVLKLLDREIAPLGYNLTL 103
+N V + ++ NI V +K D PL N+T+
Sbjct: 505 SVNAESGVVHAVRSFDYEQIKNIKVTVKAQDGGSPPLSSNVTV 547
>gi|301605224|ref|XP_002932249.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Xenopus
(Silurana) tropicalis]
Length = 2977
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y +V E+ P+ T V+ + A D D G+N +++Y+ +GG+ D +G
Sbjct: 836 NMPQFMRDRYVGSVFEDVPLSTSVLQISATDRD-SGLNGRVTYTFQGGN-------DGDG 887
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
F+I PT T K LDRE P+ YNL + AVD+G P
Sbjct: 888 ---DFKIEPTSGIIRTNAK---------LDRENVPV-YNLKVYAVDRGNP 924
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 24/110 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF Y +V E++PIGT ++T+ A D D G N++ISY++ E +
Sbjct: 735 PVFQSSHYTVSVSEDKPIGTSIVTISATDED-TGENARISYTM-------------EDNI 780
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
FRI P D GT I L LD E Y + + A D G P +
Sbjct: 781 PQFRIDP---DTGT------ITTLIELDYE-DQASYTIAVTAKDNGIPQK 820
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 48/110 (43%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F +QATV EN PIG V+ ++A DAD G N++I Y + F I+N
Sbjct: 526 NAPIFVSTPFQATVLENVPIGYSVVHIQANDAD-SGDNARIQYRLTDTPPNFPFVINNNT 584
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I V LDRE L Y + A D+G P
Sbjct: 585 GW--------------------ITVSTELDRETVEL-YTFGVEARDQGEP 613
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAPVF V+EN P+G++V + A+D D G N++I Y + G+ F +D
Sbjct: 942 NAPVFKSNELDIYVEENSPVGSVVARITASDPD-EGTNAQIMYQIVEGNNPEVFQLD 997
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 10/65 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV------RGGDGLGYF 55
++P F YQA+V EN+P GT V +L+A D D G ++ Y + R D YF
Sbjct: 203 SSPQFQLHNYQASVPENEPAGTRVTSLRAVDPD-TGEAGRLEYFMEALFDSRSND---YF 258
Query: 56 TIDNE 60
ID+E
Sbjct: 259 EIDSE 263
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F++ Y + E+ +G+ V+T+ A D D +NS ++Y + G+ F I ++
Sbjct: 631 NNPTFTEKAYHLRLNEDAAVGSSVLTMTAVDRD---VNSVVTYQITSGNTRNRFAITSQS 687
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF Y+ ++EN +G V+T++A D D N+ + Y + GG +EG
Sbjct: 311 HMPVFEQSEYRENIRENLEVGYEVMTIRATDGDALS-NANMLYRLLGG---------SEG 360
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKL-LDREIAPLGYNLTLRAVDKGTPP 112
F I P IV + +DRE A Y L + A D+G P
Sbjct: 361 ASAVFEIDPRS----------GIVRTRAPVDRE-AVADYQLIVEANDQGKDP 401
>gi|307210681|gb|EFN87104.1| Putative fat-like cadherin-related tumor suppressor-like protein
[Harpegnathos saltator]
Length = 3435
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 56/112 (50%), Gaps = 27/112 (24%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP F+ Y +T+ E+ +GTLV + A D D G+N KI Y + DG
Sbjct: 1851 NAPRFTMQTYSSTLPEDVEVGTLVTKVHATD-DDIGINRKIRYEFIDSADG--------- 1900
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVL-KLLDREIAPLGYNLTLRAVDKGTP 111
HF I D G IV L K LDRE + YN+T++A+D+GTP
Sbjct: 1901 ----HFFIAA---DSG-------IVTLGKPLDRETKAM-YNVTIQALDQGTP 1937
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 51/116 (43%), Gaps = 24/116 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS+ Y+A V+E+ IG V + A D D N +SY + GD F+ID
Sbjct: 2060 NAPIFSEVSYRAAVREDAKIGEKVAQVYANDLDSE-ENGNVSYYIERGDRQKQFSID--- 2115
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR-EIAPLGYNLTLRAVDKGTPPRETY 116
+K I V LDR EIA Y L + A D G P ++
Sbjct: 2116 -----------------RKTGQITVAAPLDREEIA--NYVLEVHARDSGIPMLSSF 2152
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 51/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ VY A V E +GT V + A D G+N+ I YS+ GG+ F ID +
Sbjct: 1955 NPPEFASKVYFARVPEIYAVGTEVARVLATSKD-TGVNADIYYSIVGGNEHKKFQIDAKT 2013
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ + + +LLD E A Y LT++AVD G PP
Sbjct: 2014 GV--------------------VTIAELLDYERAR-DYFLTIQAVDGGIPP 2043
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F + Q V E P+GT V+ + A D D G N++I+YS+ G+ F +D
Sbjct: 295 HAPEFISEIIQGKVYETSPVGTAVVQVCAIDRD-RGENARITYSITSGNVGNVFAVD--- 350
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P F V ++D G + Y L ++A D G+P
Sbjct: 351 PDLGFIRVARELDLGVTSE------------------YILLVKATDHGSP 382
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F D Y+ATV E+ GT+V+ L D D +N+ I + + GD F I + G
Sbjct: 1646 NAPAFVDDRYEATVNEDALPGTVVVKLITVDKD-SDVNTPIEFYITSGDPRSQFQIRSTG 1704
Query: 62 PL 63
+
Sbjct: 1705 EV 1706
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 44/111 (39%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y A V+E++ +G V+ DAD ++ R G+ F ++ +G
Sbjct: 2165 NPPLFSLPNYTAVVQEDKSLGHTVLQFVVTDADTEPNAEPYTFDFRSGNEGDAFRLEQDG 2224
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L TK + K K Y L +R D G+PP
Sbjct: 2225 TLR----TATKFNNRVKDK------------------YVLHVRVFDNGSPP 2253
>gi|353231481|emb|CCD77899.1| putative cadherin [Schistosoma mansoni]
Length = 1396
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 61/117 (52%), Gaps = 21/117 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F + Y+A +KEN PIGT +I + A D D G+N++I YS++ +NE
Sbjct: 575 NEPTFEEQFYKAEIKENSPIGTKIIKIHAVDKD-VGVNAQIYYSLQ----------ENEL 623
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
+ +F KIDP IV LDRE A + + LT+ A+D G +T ++
Sbjct: 624 FVPYF-----KIDPIMGW----IVNSAELDRE-AQVTFQLTVLAIDGGYDALDTSRS 670
Score = 38.9 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 10/74 (13%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGY---FTIDNE 60
P FS VY+ +KE+ P+ + + LKA D D +NS I+YS+ G L F I +
Sbjct: 289 PTFSKAVYEIQIKEDIPVNSTIYELKATDKD---VNSTITYSMENGVDLNTTLKFFIKSN 345
Query: 61 GPLNHFRIVPTKID 74
G + IV K+D
Sbjct: 346 G----YVIVQQKLD 355
>gi|348537988|ref|XP_003456474.1| PREDICTED: neural-cadherin-like [Oreochromis niloticus]
Length = 2929
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP F+ VY+ +V+E++ +G ++IT+ A D D G N+K+ Y + G+ +G F ++ E
Sbjct: 1186 NAPAFAQPVYEVSVEEDKEVGFVLITVTANDED-EGANAKLRYQITSGNTMGTFDVEPE 1243
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 2 NAPVFSD---FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGY-FTI 57
N P+F + + A V ENQP GT V+ ++A DAD G+N ++ Y + DG+ F I
Sbjct: 750 NKPLFKECQNYSLNAAVLENQPPGTFVLRVQAHDAD-MGVNGEVKYGIMNRDGVASGFDI 808
Query: 58 D 58
D
Sbjct: 809 D 809
Score = 38.5 bits (88), Expect = 0.78, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 25/113 (22%)
Query: 2 NAPVFSDFVYQA-TVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDN 59
+APVF Y++ + E+ P+GT+V + A+D D G N + SYS+ + D F +D
Sbjct: 1620 HAPVFFPQFYESPAMSEDVPVGTIVAQVTASDLD-SGQNGRFSYSISKESDPYNQFLVDQ 1678
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G +VV LDRE + + + A D G+PP
Sbjct: 1679 SGW---------------------VVVADSLDREKIS-QHRIMILATDAGSPP 1709
Score = 38.5 bits (88), Expect = 0.96, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
APVFS VY+ + E+ TLV + A D D G +SY++ GG+ F +DN+
Sbjct: 644 APVFSQNVYKTFLSEDAGPDTLVAIVHANDPDGDG----VSYAITGGNEDSNFLLDNQKG 699
Query: 63 LNHFRIVP 70
+ R P
Sbjct: 700 IIKLRRSP 707
>gi|291223058|ref|XP_002731529.1| PREDICTED: fat-like [Saccoglossus kowalevskii]
Length = 4968
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F Y T+ EN P GT V+T A DAD N+ I Y + GGDG YF I+ +
Sbjct: 3187 NSPEFESQEYNPTIPENSPSGTSVVTCVATDADSTS-NAVIVYKIIGGDGQYYFVINRQ- 3244
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
N + ++ +KK Y + V
Sbjct: 3245 --NGTIFSQSHLNYEDEKKSYELTV 3267
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 50/115 (43%), Gaps = 21/115 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF Y +EN IG V+T+ A D D ++ SY + GG+ F ID +
Sbjct: 3401 DPPVFMPNSYVGNTRENSSIGVSVLTVSAEDYDLNEPDNLFSYEIVGGNINNAFAIDQQT 3460
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I +LDRE L YNLT+ AVD G PP+ Y
Sbjct: 3461 GV--------------------ISTSAVLDREEIQL-YNLTVAAVDGGNPPQTGY 3494
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 51/110 (46%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y A++ E T V+ A D D G N++I+Y Y T NEG
Sbjct: 1186 NAPQFHLSYYSASISETAMNNTPVVHAAATDPD-AGENARITY---------YITDGNEG 1235
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
N F I P+ I ++ +LDRE P Y LT+ AVD GTP
Sbjct: 1236 --NQFHINPST---------GQITLIGVLDREAVP-QYILTVSAVDHGTP 1273
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF++ VY A+V E + GT V+T+ A D D G N ++ Y ++ F ID++
Sbjct: 2660 NAPVFTERVYFASVLEGEDSGTSVVTVSAIDHD-SGSNGQVLYLLQSAT--DDFAIDSQT 2716
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ K+LDRE Y LT+ AVD+GTP
Sbjct: 2717 G--------------------ELTTTKVLDRETNAF-YTLTIHAVDQGTP 2745
Score = 43.5 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPG-MNSKISYSVRGGDGLGYFTIDNE 60
+APVF VY E P G+LV+ L A+DAD G +NS+ISYS++ YF +++E
Sbjct: 2863 HAPVFDPDVYITERPEGIPEGSLVMKLTASDADKEGTINSEISYSMKTWS--DYFDVNSE 2920
Query: 61 -GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
G + I +I+ T + N + P YN ++ A+D G P
Sbjct: 2921 TGEV----IYKQQIEYQTPDPDSN----------VDPNLYNFSVFAIDNGLP 2958
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 39/121 (32%), Positives = 52/121 (42%), Gaps = 26/121 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F Y A V E+ +G V+ + A DAD G N ISYS+ GD F I +G
Sbjct: 1927 NVPIFDPSSYDAHVIEDVDVGYSVVKVTATDAD-AGPNGAISYSITAGDDGEEFQILEDG 1985
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK---GTPPRETYKA 118
IV K LDRE+ Y+L + A D+ GTP T +
Sbjct: 1986 ---------------------TIVTAKELDRELKEY-YSLDITASDQPLEGTPQTATARV 2023
Query: 119 T 119
+
Sbjct: 2024 S 2024
Score = 42.4 bits (98), Expect = 0.062, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
APVF + +Y A V + P+ + V+ + A D G+N+ + YS+ GG+G F I++
Sbjct: 2977 APVFVEDLYIAGVTRDAPVNSKVVQVSAVDEYDKGINAVVQYSIVGGNGTDKFDIES 3033
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS Y+ V EN P G + A DAD G N+ I Y + G+ F+ID
Sbjct: 2135 NAPAFSSESYKVEVMENMPTGKEFFQVVATDAD-VGNNAIIEYHITNGNYNNDFSID--- 2190
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
H ++ ++ +LDRE Y L++ A DKG P
Sbjct: 2191 --THTGVLASE---------------NILDRE-GRYEYTLSVTAQDKGMVP 2223
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 41/131 (31%), Positives = 64/131 (48%), Gaps = 21/131 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
+AP F Y+ T+ E+ P G+ V +L A D D +N++I Y + G+ L +F ID N
Sbjct: 450 HAPEFEYEQYEVTLSEDLPSGSFVESLTATDED-ADLNAQIFYRITEGNDLDWFEIDENT 508
Query: 61 GPLN---------HFRIV--PTKIDPGTKK--KEYNIVVLKLLDREIAP----LGYNLTL 103
G + RIV T D G + E +I++ + + AP YN+T+
Sbjct: 509 GLITTKSALDREIASRIVLNITAQDQGATQHLAETHIIINIADENDDAPTFVITSYNVTI 568
Query: 104 RAVDKGTPPRE 114
++ TPPRE
Sbjct: 569 --MENFTPPRE 577
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 35/104 (33%), Positives = 43/104 (41%), Gaps = 20/104 (19%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A V E +GT++ D D G+N + S + G NE HFRI P
Sbjct: 354 AKVAEETAVGTIIAIATVTDEDE-GLNGQTSIQITRG---------NEQ--EHFRIYPLA 401
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
Y I V LDRE YNLT D G+PPR T+
Sbjct: 402 -------SLYAIQVAASLDRERIS-QYNLTFFVKDFGSPPRYTF 437
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 48/112 (42%), Gaps = 12/112 (10%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F + + E+ GT VI A D D +Y++ GG+ D+E
Sbjct: 120 NSPNFPESRIYVSFSESARTGTSVILDTATDLDSGSYGITENYAIVGGN------TDDE- 172
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
FR+V T +P ++V LDRE Y L + A D G PPR
Sbjct: 173 ---LFRLVVTT-NPSGAAAFLHVVTTHTLDREAQDF-YQLNISAQDGGIPPR 219
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+AP F Y TV EN IG+ ++T+ A D D G N I YS G+ G F I +E
Sbjct: 3082 HAPDFIGDPYSETVFENAQIGSSILTVLATDND-VGKNGDIRYSFASGNDDGLFAIGSE 3139
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVI--TLKAADADPPGMNSKISYSVRGGDGLGYFTID- 58
N+P+F Y + ENQP GT V + A D D G +++Y++ G+ G F+ID
Sbjct: 663 NSPIFYPVNYYGEIDENQPAGTTVKHGQVSATDLD-FGSYGRVAYTIIQGNSDGRFSIDR 721
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVV 86
N G + I T +D +K Y +++
Sbjct: 722 NSGVI----IATTSLDR-EQKNSYQLII 744
Score = 35.4 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N P+F A+V E QPI T V T+ A DAD G+N+ I Y +
Sbjct: 2346 NPPIFIVTNSSASVLEEQPINTTVTTVTARDAD-EGVNAHIKYHI 2389
>gi|4887715|gb|AAA79329.2| adherin [Drosophila melanogaster]
Length = 3503
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 26/120 (21%)
Query: 2 NAPVFSDFVYQA-TVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTI 57
NAP +D +V+E QP GT V+ ++A D D G N+ I+YS+ R DG G F+I
Sbjct: 1199 NAPEIADPQEDVVSVREEQPPGTEVVRVRAVDRD-HGQNASITYSIVKGRDSDGHGLFSI 1257
Query: 58 DNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
D + R+V LD E + Y L + A D G PPRET +
Sbjct: 1258 DPTSGVIRTRVV--------------------LDHEERSI-YRLGVAASDGGNPPRETVR 1296
Score = 40.0 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT 56
N P+F Y +V EN+P+G ++ + A+D D G+N+ ++Y++ G+G + T
Sbjct: 554 NEPIFDQSFYNVSVAENEPVGRCILKVSASDPD-CGVNAMVNYTI--GEGFKHLT 605
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y +V+E+ P+GT V+ + A DAD G+N+++ YS+ + F ID +
Sbjct: 1895 NAPRFKLSKYTGSVQEDAPLGTSVVQISAVDAD-LGVNARLVYSL-ANETQWQFAIDGQS 1952
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
L I + LDRE+ YN + A D G
Sbjct: 1953 GL--------------------ITTVGKLDRELQA-SYNFMVLATDGG 1979
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NEG- 61
P+F Y VKE+ P GT+V ++ AA D S + YS+ GD GYF+I+ N G
Sbjct: 772 PIFEKARYNYYVKEDIPRGTVVGSVIAASGD-VAHRSPVRYSIYSGDPDGYFSIETNSGN 830
Query: 62 -----PLNH 65
PL+H
Sbjct: 831 IRIAKPLDH 839
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 50/112 (44%), Gaps = 14/112 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N PVF Y V E++ I +I + A+D D G N++I+Y + G D + +I +
Sbjct: 979 NPPVFEKDEYSVNVSESRSINAQIIQVNASDLD-TGNNARITYRIVDAGVDNVTN-SISS 1036
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
HF I P I + LDRE Y LT+ A D GTP
Sbjct: 1037 SDVSQHFGIFPN---------SGWIYLRAPLDRETRDR-YQLTILATDNGTP 1078
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 16/112 (14%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
V +NQP T+ + + DA P KIS S + G+ + ++ + + V ++
Sbjct: 333 VNDNQP--TINVIFLSDDASP-----KISESAQPGEFVARISVHDPDSKTEYANVNVTLN 385
Query: 75 PG-------TKKKEYNIVVLKL-LDREIAPLGYNLTLRAVDKGTPPRETYKA 118
G T+ +V++ L LDREI Y L++ A DKGTPP K+
Sbjct: 386 GGDGHFALTTRDNSIYLVIVHLPLDREIVS-NYTLSVVATDKGTPPLHASKS 436
Score = 36.2 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P FS + ATV E GT V + A D+D G N+++ Y + G+ F I+
Sbjct: 2265 NSPKFSQKQFVATVSEGNNKGTFVSQVHAFDSD-AGSNARLRYHIVDGNHDNAFVIEPA- 2322
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
IV T I +LDREI + Y L + A D+G P
Sbjct: 2323 ---FSGIVRTNI---------------VLDREIRDI-YKLKIIATDEGVP 2353
Score = 35.8 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 50/116 (43%), Gaps = 24/116 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P+F+ Y ATV EN +GT V+ + A+D D N + Y++ R D F
Sbjct: 229 NQPIFNQSRYFATVPENATVGTSVLQVYASDTD-ADENGLVEYAINRRQSDKEQMF---- 283
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+IDP T I + K LD E L + L + A D G P ET
Sbjct: 284 ------------RIDPRTGA----IYINKALDFETKEL-HELVVVAKDHGEQPLET 322
Score = 35.0 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 26/113 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ ++EN G++V + A+D D G N+ I YS+
Sbjct: 1096 NDPKFQKSKYEFRIEENLRRGSVVGVVTASDLD-LGENAAIRYSLL-------------- 1140
Query: 62 PLN-HFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P+N F++ P + T++ LDRE+ L Y+L + A D+GTP R
Sbjct: 1141 PINSSFQVHPVTGEISTREP---------LDRELREL-YDLVVEARDQGTPVR 1183
>gi|323146962|gb|ADX32774.1| cadherin 6 [Canis lupus familiaris]
Length = 188
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P+F+ VY ATV E +GT V+ + A DAD P G ++K+ YS+ G YF++++
Sbjct: 89 NEPIFTKDVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSIL--QGQPYFSVES 146
Query: 60 EGPLNHFRIVPTKIDPGT 77
E F+ P PGT
Sbjct: 147 ETGTYQFK-TPESSPPGT 163
>gi|321472651|gb|EFX83620.1| hypothetical protein DAPPUDRAFT_301624 [Daphnia pulex]
Length = 1627
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 25/109 (22%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+ APVF+ Y+ +V E P+ +LV T KA D + N +++YS+ G+ LG+F ++
Sbjct: 640 IQAPVFTKDSYEISVDEGSPVNSLVYTFKARDQE----NDRVTYSIVAGNELGHFKME-- 693
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
K ++++ K +DRE Y LT+RA D G
Sbjct: 694 ------------------KSNGSLLLAKPIDREQLS-RYVLTVRAEDTG 723
>gi|405953973|gb|EKC21529.1| Protocadherin Fat 4 [Crassostrea gigas]
Length = 4768
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF++ Y V E+ PIGT + ++A DAD G+N ++ Y++ G F +D +
Sbjct: 1658 NAPVFTNVFYSFDVPEDTPIGTTIALVEAVDAD-QGLNGEVVYTLVSTWGQSIFHLDPQ- 1715
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
GT I ++K +D E L ++LT+ A DKG+P + T
Sbjct: 1716 -------------MGT------IRLIKNVDYEQNHL-FSLTILASDKGSPSQST 1749
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 23/113 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
+APVF +Y + V E+ P G ++T+ A D G N+++ Y + G+G YF I+
Sbjct: 2820 HAPVFDQDLYFSAVPESAPQGERILTVLAQDKLDVGQNAEVEYFIESGNGSSYFFINKTT 2879
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
G + +++ TK + +++ I T+RA DKG PP+
Sbjct: 2880 GLITVAQVLSTK-----RNQDFTI-----------------TIRAEDKGMPPK 2910
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 53/109 (48%), Gaps = 21/109 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN-E 60
N P F + VY +++EN P+ + V T+ A DAD G N K+ Y + GG+ +DN +
Sbjct: 2498 NTPRFQEGVYITSIRENVPVSSKVYTVNATDAD-SGDNGKVVYVLAGGN------VDNIQ 2550
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
G N +DP T + + LDRE YNL + A D G
Sbjct: 2551 GTFN--------VDPVTGVIQTKVA----LDRETQDF-YNLIIEAHDMG 2586
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 22/118 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y V EN +GT+V+T++A D D G+N ++ YS+ G+ F I
Sbjct: 1763 NEPQFNHQSYAGQVLENAAVGTVVLTVQATDID-SGINGQLKYSLLEGNSSSDFGI---- 1817
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
D GT I L+ LDRE + Y+L + A D+ P T
Sbjct: 1818 ----------GTDNGT------IYTLQNLDRETRSV-YSLVVIATDQAEPSSSQKSTT 1858
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
PVF V+E+ PIG V + A D D PG N K+SY + GG+ G F I++E
Sbjct: 2928 PVFQPASRVYNVQEDAPIGQSVARVTATDQDSPGPNGKVSYYILGGNPGGVFQINSE 2984
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 61/121 (50%), Gaps = 24/121 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNE 60
+APVF+ +YQA++ EN G V T+ A D D + + SY + RGG+ F+ID+
Sbjct: 3248 DAPVFTQSLYQASILENSAGGVTVTTVTANDRDNMPEDRQFSYRILRGGEE---FSIDS- 3303
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
+ RI T G K LDRE +++ + AVD+GTPP T AT
Sbjct: 3304 ---TNGRIHTT----GRGK----------LDRETNAT-HSILVGAVDRGTPP-ATGSATV 3344
Query: 121 R 121
R
Sbjct: 3345 R 3345
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N PVF VY TV+E+ IGT ++ + A D+D G+N + + + GD F++D +
Sbjct: 1972 NPPVFVPSVYSKTVREDVKIGTTLLQVTATDSD-SGLNGVVRFFITSGDDNADFSMDPSS 2030
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
G L V K LD E Y LT++A D G PR
Sbjct: 2031 GVLR---------------------VQKNLDYERVN-KYTLTIQAEDMGVSPR 2061
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F VY+ ++E+ +G +I + A D D G+N++I YS+ DG F +D+
Sbjct: 1307 NTPLFHLTVYEVNIREDAKLGEKLIQVTADDTD-LGINAEIEYSLSESDGT--FVLDSHN 1363
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
N+ + KL+D E + Y+L + A DKG P
Sbjct: 1364 G--------------------NLYLAKLVDYETRKV-YSLKVIATDKGDP 1392
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 48/112 (42%), Gaps = 23/112 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF Y T++E+ + T TL A DAD G N+ + Y++ G+ G F I G L
Sbjct: 990 PVFPKTDYAITLEESTLVNTQFHTLTATDAD-VGRNAALVYNITKGNDDGKFGIFPNGKL 1048
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ K LDRE L Y LT+ A D G P R +
Sbjct: 1049 ---------------------YIAKQLDRETRDL-YKLTVMAQDHGAPARSS 1078
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 57/107 (53%), Gaps = 20/107 (18%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKI 73
+V E G V+ + +DAD GM++ IS SV+ G NE LNHFR+
Sbjct: 372 SVNETAKNGDYVVAITVSDADS-GMSANIS-SVQIVAG-------NE--LNHFRL----- 415
Query: 74 DPGTKKKEYNIVVLKL--LDREIAPLGYNLTLRAVDKGTPPRETYKA 118
+ +YN +++ + LDRE YNLT++AVD G+PP+ K+
Sbjct: 416 -NSFFQFKYNALLVNVNGLDRERID-QYNLTIQAVDMGSPPKTGTKS 460
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y A V E P+G+ + L A D D G+N+K++Y + G+ +F I++E L
Sbjct: 473 PTFLQRQYVANVLETLPVGSFIANLVAEDKD-SGINAKLTYKILSGNNNDWFEINSETGL 531
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
P FS YQ + E +GT VI+L AAD+D G+N + YS+
Sbjct: 578 PTFSQSSYQVHLLEGLQLGTEVISLTAADSD-SGLNGSVIYSLH 620
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P+FS Y +TV E+ P+ TLVI + A D D G N I Y++ D F ID
Sbjct: 244 NPPIFSLSQYTSTVNESSPVDTLVIRVDATD-DDIGENGNIFYTMT--DESKQFKID 297
>gi|262263217|tpg|DAA06594.1| TPA_inf: protocadherin gamma a2 isoform [Anolis carolinensis]
Length = 939
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/44 (54%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
NAPVF+ VYQ + E+ PIG LV+TL A DAD G N++++YS
Sbjct: 237 NAPVFNQPVYQLNILESVPIGFLVVTLNATDAD-EGTNAEVTYS 279
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 19/113 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F++ + + E +GT +A DAD G NS +Y +
Sbjct: 127 NAPTFAEESLELRISETAIVGTHFPLQEAQDAD-SGNNSIQNYHLSSSS----------- 174
Query: 62 PLNHFRIVPTKIDPGTKKKEY-NIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
HF + K+ G+ + +Y +V++K LDRE + + LTL A D G P R
Sbjct: 175 --KHFSL---KLQRGSDRDKYPELVLVKSLDREEEAVQF-LTLTATDGGHPVR 221
>gi|344272257|ref|XP_003407951.1| PREDICTED: cadherin-6 [Loxodonta africana]
Length = 790
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 65/124 (52%), Gaps = 12/124 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P+F+ VY ATV E +GT V+ + A DAD P G ++K+ YS+ G YF++++
Sbjct: 155 NEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQ--PYFSVES 212
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTP--PR 113
E + + +D +++ + ++ K + ++ L N+TL V+ P P+
Sbjct: 213 ETGI--IKTALLNMDRENREQYHVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQ 270
Query: 114 ETYK 117
TY+
Sbjct: 271 STYQ 274
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ E+ P GT + +KA+DAD G N++I YS+ G+GL F + +
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDAD-VGENAEIEYSITEGEGLDMFDVITDQ 322
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
I K+ KKK Y + V
Sbjct: 323 DTQEGIITVKKLLDFEKKKAYTLKV 347
>gi|119514236|gb|ABL75899.1| protocadherin 2G24 [Takifugu rubripes]
Length = 940
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAPVF+ VY+ATV EN IGTL+ + A+DAD G+N KI+Y++
Sbjct: 228 NAPVFTKPVYKATVPENALIGTLITKVSASDAD-KGLNGKITYTM 271
>gi|297676174|ref|XP_002816019.1| PREDICTED: protocadherin alpha-3 [Pongo abelii]
Length = 824
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 25/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR---GGDGLGYFTID 58
NAP F +Y+ + EN P GTLV+T+ A D D G+N I+YS D L F +D
Sbjct: 238 NAPAFERTIYKVRLFENAPNGTLVVTVNATDLD-EGVNKDIAYSFNTDMSADILSKFHLD 296
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+N V ID K Y + + A DKG PP
Sbjct: 297 ---PVNGQITVKGNIDFEESKS------------------YEIQVEATDKGNPP 329
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 29/117 (24%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGL--GYFT 56
NAP F+ Y VKEN P G + T+ A DAD N+ +SYS+ R G+ Y +
Sbjct: 451 NAPAFAQSEYTVFVKENNPPGCHIFTVSARDADAQ-ENALVSYSLVEQRVGERALSSYLS 509
Query: 57 IDNEG-------PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE--IAPLGYNLTLR 104
+ E PL+H +E ++ ++ R+ + PLG N+TL+
Sbjct: 510 VHAESGKVYALQPLDH--------------EELELLQFQVSARDAGVPPLGSNVTLQ 552
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 18/110 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF V + E++ G+ A+DAD G NS ++YS+ D YFT+D +
Sbjct: 129 NAPVFPMAVKNLFISESRQPGSRFSLEGASDAD-IGTNSLLTYSL---DSTEYFTLDVK- 183
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K K +V+ K L+RE P Y L + A+D G P
Sbjct: 184 ------------RNDEKIKSLGLVLKKNLNREDTPKHY-LLITAIDGGKP 220
>gi|190338036|gb|AAI62593.1| Pcdh2ab12 protein [Danio rerio]
Length = 942
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 18/115 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF +Y+ + EN+P+GTLVI L A D D G+NS+I YS+ D ++
Sbjct: 234 NAPVFGKALYKVRIVENRPLGTLVINLNATDLD-EGLNSEIIYSLVQQDS-------DDK 285
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ F KID T + V +D E Y + +A DKG PR +
Sbjct: 286 ASSVF-----KIDSATGV----VSVQGRVDFE-ERNAYEIHAQAKDKGASPRSAH 330
>gi|449475293|ref|XP_004175471.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin alpha-9-like
[Taeniopygia guttata]
Length = 986
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 51/111 (45%), Gaps = 19/111 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ VY+ + EN+ GTLVI L A D D G N ISYS+ F D +
Sbjct: 666 NAPQFNQSVYKVQLPENKEHGTLVIKLNATDLD-EGSNRNISYSLE-----TLFPQDRKD 719
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G ++ I +LK LD E L Y L + A D+G PP
Sbjct: 720 VF------------GIDRRTGEIRLLKDLDFEDVSL-YRLQVGATDQGNPP 757
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAP F+ VY+ E GTL++TL A D D G+NS I Y
Sbjct: 224 NAPQFNQSVYKVKAPEGSEQGTLLVTLSATDPD-DGINSDIIY 265
>gi|25090185|sp|Q24292.3|DS_DROME RecName: Full=Protein dachsous; AltName: Full=Adherin; Flags:
Precursor
Length = 3503
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 26/120 (21%)
Query: 2 NAPVFSDFVYQA-TVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTI 57
NAP +D +V+E QP GT V+ ++A D D G N+ I+YS+ R DG G F+I
Sbjct: 1199 NAPEIADPQEDVVSVREEQPPGTEVVRVRAVDRD-HGQNASITYSIVKGRDSDGHGLFSI 1257
Query: 58 DNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
D + R+V LD E + Y L + A D G PPRET +
Sbjct: 1258 DPTSGVIRTRVV--------------------LDHEERSI-YRLGVAASDGGNPPRETVR 1296
Score = 40.0 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT 56
N P+F Y +V EN+P+G ++ + A+D D G+N+ ++Y++ G+G + T
Sbjct: 554 NEPIFDQSFYNVSVAENEPVGRCILKVSASDPD-CGVNAMVNYTI--GEGFKHLT 605
Score = 39.7 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y +V+E+ P+GT V+ + A DAD G+N+++ YS+ + F ID +
Sbjct: 1895 NAPRFKLSKYTGSVQEDAPLGTSVVQISAVDAD-LGVNARLVYSL-ANETQWQFAIDGQS 1952
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
L I + LDRE+ YN + A D G
Sbjct: 1953 GL--------------------ITTVGKLDRELQA-SYNFMVLATDGG 1979
Score = 39.3 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NEG- 61
P+F Y VKE+ P GT+V ++ AA D S + YS+ GD GYF+I+ N G
Sbjct: 772 PIFEKARYNYYVKEDIPRGTVVGSVIAASGD-VAHRSPVRYSIYSGDPDGYFSIETNSGN 830
Query: 62 -----PLNH 65
PL+H
Sbjct: 831 IRIAKPLDH 839
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 50/112 (44%), Gaps = 14/112 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N PVF Y V E++ I +I + A+D D G N++I+Y + G D + +I +
Sbjct: 979 NPPVFEKDEYSVNVSESRSINAQIIQVNASDLD-TGNNARITYRIVDAGVDNVTN-SISS 1036
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
HF I P I + LDRE Y LT+ A D GTP
Sbjct: 1037 SDVSQHFGIFPN---------SGWIYLRAPLDRETRDR-YQLTVLATDNGTP 1078
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 16/112 (14%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
V +NQP T+ + + DA P KIS S + G+ + ++ + + V ++
Sbjct: 333 VNDNQP--TINVIFLSDDASP-----KISESAQPGEFVARISVHDPDSKTEYANVNVTLN 385
Query: 75 PG-------TKKKEYNIVVLKL-LDREIAPLGYNLTLRAVDKGTPPRETYKA 118
G T+ +V++ L LDREI Y L++ A DKGTPP K+
Sbjct: 386 GGDGHFALTTRDNSIYLVIVHLPLDREIVS-NYTLSVVATDKGTPPLHASKS 436
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P FS + ATV E GT V + A D+D G N+++ Y + G+ F I+
Sbjct: 2265 NSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSD-AGSNARLRYHIVDGNHDNAFVIEPA- 2322
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
IV T I +LDREI + Y L + A D+G P
Sbjct: 2323 ---FSGIVRTNI---------------VLDREIRDI-YKLKIIATDEGVP 2353
Score = 35.8 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 50/116 (43%), Gaps = 24/116 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P+F+ Y ATV EN +GT V+ + A+D D N + Y++ R D F
Sbjct: 229 NQPIFNQSRYFATVPENATVGTSVLQVYASDTD-ADENGLVEYAINRRQSDKEQMF---- 283
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+IDP T I + K LD E L + L + A D G P ET
Sbjct: 284 ------------RIDPRTGA----IYINKALDFETKEL-HELVVVAKDHGEQPLET 322
Score = 35.0 bits (79), Expect = 9.0, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 26/113 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ ++EN G++V + A+D D G N+ I YS+
Sbjct: 1096 NDPKFQKSKYEFRIEENLRRGSVVGVVTASDLD-LGENAAIRYSLL-------------- 1140
Query: 62 PLN-HFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P+N F++ P + T++ LDRE+ L Y+L + A D+GTP R
Sbjct: 1141 PINSSFQVHPVTGEISTREP---------LDRELREL-YDLVVEARDQGTPVR 1183
>gi|390477875|ref|XP_002761088.2| PREDICTED: cadherin-5 isoform 1 [Callithrix jacchus]
Length = 847
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS ++ A+V E+ +GT V ++ A DAD P + S + G YF IDN G
Sbjct: 210 NWPVFSHRLFNASVPESSAVGTSVTSVTAVDADDPTVADHTSVMYQILKGKEYFAIDNTG 269
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
+ + TK K+ Y IVV
Sbjct: 270 LI----VTATKNLDREKQARYEIVV 290
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 47/114 (41%), Gaps = 33/114 (28%)
Query: 4 PVFSDFVYQATVKENQP---IGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
PVF Y +KENQ IGT++ DP I YS+R G F
Sbjct: 433 PVFQQHFYHFQLKENQKKPLIGTVLA------KDPDAARHNIGYSIRRTSDKGQF----- 481
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD---KGTP 111
FR+ K+ +I K LDRE+ P YNLT+ A + GTP
Sbjct: 482 -----FRVT----------KKGDIYNEKELDREVYPW-YNLTVEAKELDSTGTP 519
>gi|348546179|ref|XP_003460556.1| PREDICTED: protocadherin gamma-C3-like, partial [Oreochromis
niloticus]
gi|348546181|ref|XP_003460557.1| PREDICTED: protocadherin gamma-C3-like, partial [Oreochromis
niloticus]
Length = 432
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS---VRGGDGLGYFTID 58
N PVFS +Y+ T+ EN IGT +ITL A D D G N +ISYS + G F+ID
Sbjct: 235 NPPVFSQMLYKVTIHENVNIGTSIITLNATDLD-DGKNGQISYSFMEIDEGKQTDVFSID 293
Query: 59 NE 60
+
Sbjct: 294 EQ 295
Score = 42.4 bits (98), Expect = 0.070, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S TVKE+ +GT + + D D G +G+ I N
Sbjct: 343 NAPEISVTSLLNTVKEDSSVGTAIALVSIFDKD------------EGKNGMVTCKISNN- 389
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
VP ++ K Y++VV LDRE AP YN+++ A D+G+PP
Sbjct: 390 -------VPFTLE-SNYKNSYSLVVDGDLDRETAP-QYNISITATDEGSPP 431
>gi|262263227|tpg|DAA06604.1| TPA_inf: protocadherin gamma b3 isoform [Anolis carolinensis]
Length = 939
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
NAPVFS +Y+ ++KEN PIG V+ +KA+D+D G+N++I+Y+
Sbjct: 239 NAPVFSQAMYKVSLKENVPIGMSVLQVKASDSD-EGLNAEITYT 281
Score = 39.3 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 19/28 (67%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Query: 90 LDREIAPLGYNLTLRAVDKGTPPRETYK 117
LDRE AP YN+T+ A DKGTPP TYK
Sbjct: 411 LDRESAP-EYNITITATDKGTPPLSTYK 437
>gi|262263223|tpg|DAA06600.1| TPA_inf: protocadherin gamma b2 isoform [Anolis carolinensis]
Length = 940
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR--GGDGLGYFTID 58
NAPVFS +Y+ ++KEN PIG V+ +KA+D+D G N++I+Y+ G FT+D
Sbjct: 240 NAPVFSQAIYKVSLKENAPIGMSVLQVKASDSD-EGSNAEITYTFSDIAEKGEQKFTLD 297
>gi|432879574|ref|XP_004073494.1| PREDICTED: uncharacterized protein LOC101170599 [Oryzias latipes]
Length = 1918
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS---VRGGDGLGYFTID 58
NAPVFS +Y+A+V+EN GT +ITL A D D G+N ++SYS V G F ID
Sbjct: 936 NAPVFSQSLYKASVQENVKKGTTIITLNATDLD-SGLNGQVSYSFSEVGRGKQADIFQID 994
Query: 59 NE 60
+
Sbjct: 995 EK 996
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
N PVF+ +Y+ATV+EN +GT +ITL A D D G N ++SYS
Sbjct: 235 NPPVFTQVLYKATVRENVKVGTSLITLNATDVD-AGSNGQVSYS 277
Score = 42.7 bits (99), Expect = 0.053, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S ++VKE+ GT + + D D G +G+ I N+
Sbjct: 343 NAPEISVTSLLSSVKEDVSTGTAIALVSVFDKD------------SGKNGMVTCKISND- 389
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
VP K++ K Y++VV LDREIAP YN+++ A D+G PP
Sbjct: 390 -------VPFKLE-NNYKNYYSLVVDGELDREIAP-QYNISITAADEGRPP 431
Score = 42.7 bits (99), Expect = 0.053, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S ++VKE+ GT + + D D G +G+ I N+
Sbjct: 1386 NAPEISVTSLLSSVKEDVSTGTAIALVSVFDKD------------SGKNGMVTCKISND- 1432
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
VP K++ K Y++VV LDREIAP YN+++ A D+G PP
Sbjct: 1433 -------VPFKLE-NNYKNYYSLVVDGELDREIAP-QYNISITAADEGRPP 1474
Score = 42.0 bits (97), Expect = 0.080, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S +VKE+ GT + + D D G +G+ I N+
Sbjct: 1044 NAPEISVTSLLNSVKEDVSTGTAIALVSVLDKD------------SGKNGMVTCKISND- 1090
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
VP K++ K Y++VV LDREIAP YN+++ A D+G PP
Sbjct: 1091 -------VPFKLE-NNYKNYYSLVVDGELDREIAP-QYNISITAADEGKPP 1132
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 18/122 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F++ + +KEN P G+++ T+ A DAD N +++YS+ T N
Sbjct: 448 NRPLFTENIVNIFMKENSPSGSVLKTVSAVDADIE-QNGRVTYSL-------LHTNINSM 499
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
PL+ T I+ ++ E I+ L+ D E + ++A D G PP + T
Sbjct: 500 PLS------TMINIRSETGE--IISLQSFDYENLKT-FQFKVQATDSGVPPLSS-NVTSD 549
Query: 122 NG 123
NG
Sbjct: 550 NG 551
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 17/111 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F++ + +KEN P G+++ T+ A DAD N +++YS+ T N
Sbjct: 1491 NRPLFTENIVNIFMKENSPSGSVLKTVSAVDADIE-QNGRVTYSL-------LHTNINSM 1542
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PL+ T I+ ++ E I+ L+ D E + ++A D G PP
Sbjct: 1543 PLS------TMINIRSETGE--IISLQSFDYEKLKT-FQFKVQATDSGVPP 1584
>gi|260830788|ref|XP_002610342.1| hypothetical protein BRAFLDRAFT_72456 [Branchiostoma floridae]
gi|229295707|gb|EEN66352.1| hypothetical protein BRAFLDRAFT_72456 [Branchiostoma floridae]
Length = 3154
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 57/125 (45%), Gaps = 22/125 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F D Y V EN P+ TLV + A D D G N+ I+YS+ G N G
Sbjct: 1446 NDPIFQDLPYYCRVSENAPVDTLVFKVSANDTD-EGNNAFITYSITSG---------NIG 1495
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ FRI GT + Y V LLDRE+ P Y LT+ A D P + T +
Sbjct: 1496 QV--FRI------NGTNGEIY---VNGLLDREVIP-QYTLTVTARDNPQNPTHVRRDTTQ 1543
Query: 122 NGLTC 126
+T
Sbjct: 1544 VYITV 1548
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 24/114 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
APVF + Y + EN+PIGT ++ + A D D G NS++SYS+ G+ +DN
Sbjct: 2374 APVFDEEEYARPILENEPIGTSILYVHAEDGD-LGNNSRLSYSIAEGN------VDNAFK 2426
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPL--GYNLTLRAVDKGTPPRE 114
+N ++ +V++ + E A + Y L + A D GTPP E
Sbjct: 2427 IN---------------EKSGLVMVNTILSEKARIINEYRLEVVARDHGTPPLE 2465
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG 51
N P+FS YQA+V ENQP GT V+ ++A D D G ++ Y + G G
Sbjct: 1943 NNPIFSLKKYQASVLENQPAGTEVLRVEATDRD-SGSYGRVQYHLSGAGG 1991
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N PVFS VY+ V E+ G LV ++A DAD N K+ Y + G+ F ID E
Sbjct: 2261 NPPVFSQDVYRVEVMEDIQPGALVGQVEATDADALPQNKKVLYHILSGNVYNTFRIDTE 2319
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P+F Y TV+EN+ T ++ ++A D D P N + Y++ GD L FTI E
Sbjct: 497 NRPIFQRDDYVGTVRENEASQTPILRVRATDEDSPPYNILV-YNITSGDSLHNFTISTE 554
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 55/112 (49%), Gaps = 24/112 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ Y +V+EN PIGT ++ + A+D D GD + YF I+++ P
Sbjct: 396 PTFTQSTYSLSVEENIPIGTSLLNVSASDRDIGEF----------GD-VTYF-INDDDP- 442
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
FR ID T I L LD E A ++LT+ A D GTPP++T
Sbjct: 443 -RFR-----IDGNTGV----IYTLDQLDYEDA-WRFSLTIIAQDGGTPPQQT 483
Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N+P+F +++A V EN GT V ++A+D D G+N I+Y + G G FTI+ E
Sbjct: 1662 NSPIFISTLFRANVSENAFPGTSVTRIEASDQD-DGLNQLITYRIESG-GQDKFTINPE 1718
Score = 37.4 bits (85), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 51/116 (43%), Gaps = 25/116 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P S + V ENQP G V T+ A+D D G +G F+I +
Sbjct: 2050 NTPEPSTSKFDFRVPENQPAGEYVGTILASDRD------------EGDNGRLQFSILKQE 2097
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYN----LTLRAVDKGTPPR 113
P NH + + G I +LLDRE +GYN LT++ D G+PPR
Sbjct: 2098 P-NHVMLFDIENTTGV------ISSARLLDRE--TMGYNGIVELTIQISDLGSPPR 2144
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
PVF Y ATV+E+ +G +++ + A D D G+ + I YS+ G+ F +D+
Sbjct: 173 PVFLGLPYDATVREDAEVGHVIVRISAMDQD-SGIPNDIQYSIVTGNVDNVFDLDD 227
>gi|432879477|ref|XP_004073490.1| PREDICTED: protocadherin alpha-2-like [Oryzias latipes]
Length = 786
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 56/118 (47%), Gaps = 23/118 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P+FS +Y+ +V+EN+ +GT ++ L A D D G N++I YS+ RG N
Sbjct: 223 NTPLFSKPLYKVSVRENESVGTTILKLNATDLD-EGSNAEIKYSLMKRG----------N 271
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
F +VP + IV+ LD E Y L ++A DKG PR Y
Sbjct: 272 VDSHEKFYVVP---------ESGEIVLKNRLDYE-ENNAYELRVQASDKGGSPRSGYS 319
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S + VKE IGT+V + D D G +G+ I N
Sbjct: 331 NAPEISITSVMSPVKEKAEIGTVVALVTVTDKDG------------GQNGITTCKIKN-- 376
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I+P K+ K Y+++V LLDRE YN+T+ AVD G+ P
Sbjct: 377 ------ILPFKLTTNYKNY-YSLIVDGLLDRETVA-EYNVTITAVDAGSLP 419
>gi|345320248|ref|XP_001517550.2| PREDICTED: protocadherin gamma-A7-like, partial [Ornithorhynchus
anatinus]
Length = 585
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
NAPVF+ VYQ V+E+ P+GT V+T+ A D D G+N ++YS R
Sbjct: 143 NAPVFTQSVYQVRVREDVPMGTRVVTVNATDPD-EGVNGHVTYSFR 187
>gi|195159445|ref|XP_002020589.1| GL15349 [Drosophila persimilis]
gi|194117539|gb|EDW39582.1| GL15349 [Drosophila persimilis]
Length = 1812
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 51/107 (47%), Gaps = 25/107 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTIDNEGPLNHFRIVP 70
+V+E QP GT V+ ++A D D G N+ I+YS+ R DG G F+ID + R+
Sbjct: 1255 SVREEQPPGTEVVRIRATDRD-HGQNASITYSIVKGRDSDGHGLFSIDPATGVIRTRV-- 1311
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
LLD E + Y L + A D G PP+ET +
Sbjct: 1312 ------------------LLDHEERSI-YRLGVAATDGGQPPKETLR 1339
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT 56
N P+F Y +V EN+P+G ++ + A+D D G+N+ ++Y++ G+G + T
Sbjct: 596 NEPIFDQSFYNVSVAENEPVGRCILKVSASDPD-CGVNAMVNYTL--GEGFKHLT 647
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 50/116 (43%), Gaps = 24/116 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P+F+ Y ATV EN +GT V+ + A+D D N + Y++ R D F
Sbjct: 271 NQPIFNQSRYFATVPENATVGTSVLQVYASDTDAE-ENGLVEYAINRRQSDKEQMF---- 325
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+IDP T I + K LD E L + L + A D G P ET
Sbjct: 326 ------------RIDPQTGA----IFINKALDFETKEL-HELVVVAKDHGEQPLET 364
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+F Y VKE+ P GT+V ++ A D S + YS+ GD GYF I EG
Sbjct: 814 PIFEKARYNYYVKEDIPQGTVVGSVIATSGD-TAHRSPVRYSIYSGDPDGYFGI--EGGS 870
Query: 64 NHFRI 68
+ RI
Sbjct: 871 GNIRI 875
>gi|195342413|ref|XP_002037795.1| GM18105 [Drosophila sechellia]
gi|194132645|gb|EDW54213.1| GM18105 [Drosophila sechellia]
Length = 1207
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 49/112 (43%), Gaps = 21/112 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F Y +T+ E P+GT V T+KA D D N++ SYS+ G+ F ID
Sbjct: 393 DPPEFIKHYYTSTISEAAPVGTNVTTVKAIDKDVRTQNNQFSYSIINGNLKQSFKID--- 449
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ G I LDRE YNL + A+D G PP+
Sbjct: 450 -----------VQTG------EISTASRLDREETST-YNLVIGAIDTGLPPQ 483
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++ P F YQ V EN+P+G+ ++T+ A D D G N + YS+ GG+ F++D
Sbjct: 76 LDTPRFRVNSYQVIVPENEPVGSTILTVGATDGD-TGPNGMLRYSISGGNERQDFSVD 132
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P F+ + EN+P GT ++TL A+D D P +Y + GG + ++D
Sbjct: 499 NGPTFTPEGLNGYISENEPAGTSIMTLMASDPDLPRNGGPFTYQLVGGKHKSWLSVD 555
>gi|432955684|ref|XP_004085600.1| PREDICTED: protocadherin gamma-A8-like, partial [Oryzias latipes]
Length = 768
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 23/43 (53%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVFS+ VY A+++EN P+ T VI + A+DAD G+N +I+Y
Sbjct: 235 NAPVFSESVYTASLQENSPLNTPVIRVSASDAD-EGINGEITY 276
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 22/116 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPV +++ EN P GT V + D D S + VR I++
Sbjct: 340 NAPVIIIKSLISSISENAPPGTEVGIINVQDRD-----SDRNRQVR-------CYIESNS 387
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
P F++VP+ K Y++V LDRE+ YN+T+ A D+G+PP + K
Sbjct: 388 P---FKLVPSI------KNYYSVVSTGQLDRELVS-DYNITISATDEGSPPLSSSK 433
>gi|47216301|emb|CAF96597.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2244
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ +GT ++ ++AA D N +ISY + G+ G F+
Sbjct: 1981 NPPVFEHREYTATVSEDVSVGTQLLRVQAASRDTEA-NGEISYGIISGNEHGLFS----- 2034
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+DP T +I V++ LD E A Y +T+ A D G+PP
Sbjct: 2035 -----------VDPRTG----DIFVIQPLDYE-ASHEYYITVEATDGGSPP 2069
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN-E 60
N PVFS VY A V E+ +G VIT+ A D D P +S + YS+ G+ FTID+
Sbjct: 2086 NRPVFSQDVYTAVVSEDAELGKTVITVNAEDLDGPS-HSHVRYSIVDGNQGSPFTIDSAR 2144
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKL--LDREIAPLGYNLTLRAVD 107
G L V ++D + + VL+L DR+ + G T VD
Sbjct: 2145 GELK----VAHQLDRERENRPKGTSVLQLTVTDRDASHNGPPFTFAIVD 2189
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
NAPVF Y A V E +GT ++ + A D+D G N ++ + + G+ +FTID
Sbjct: 1033 NAPVFLSKAYHANVSEASVVGTRILQVDAKDSD-TGNNQEVFFQLVEEKGESSDFFTIDR 1091
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
D GT I +LLD E + L +RAVD+G P
Sbjct: 1092 --------------DTGT------ISTAQLLDYE-EIRQHELRVRAVDRGVP 1122
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F + V E+ +G+ V+ + A D D G N+++ YS+ G+ F+ID
Sbjct: 312 NAPWFVGAPFSGRVFESAAVGSAVLQVTARDKDK-GRNAEVVYSLESGNFANTFSID--- 367
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
K I V K LDR+ + Y LT++A D G PP T
Sbjct: 368 -----------------PKLGTITVAKELDRD-SKAQYELTVKASDNGVPPLST 403
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 19/93 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVIT-LKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F+ +Y+ TV E+ P + VI L DAD +N +++Y + GGD LG F I++
Sbjct: 1669 NPPRFTAEIYKGTVSEDDPPPSGVIAILSTTDADSEDINKQVNYFITGGDPLGQFAIEH- 1727
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
+ E+ + V K LDRE
Sbjct: 1728 -----------------IQNEWKVFVKKPLDRE 1743
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y++T+ + P GT V+ + A+D D G N+ I YS+ D E
Sbjct: 1346 NAPQFRAADYKSTIASDVPRGTSVVRISASDLD-EGSNADIEYSIEA---------DVEN 1395
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+F I PT TK+ L L+ E+ Y +RA D G PP+ +
Sbjct: 1396 VEENFEIHPTSGLIVTKES------LIGLENEL----YAFFVRAKDTGNPPQHS 1439
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 50/108 (46%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P +Y +V EN P G L++ + A+DAD N++I Y ++G G FTID+
Sbjct: 1775 NSPQCEKALYSESVPENSPAGRLILQVSASDADIRS-NAQIFYELQGA-GSELFTIDS-- 1830
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
D G K L+ LDRE + +RAVD G
Sbjct: 1831 ------------DTGELK------TLQPLDRE-EQEEHRFKMRAVDGG 1859
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 48/110 (43%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS +Y TV EN IGT V L A D D G NS I YS+ G+F+ID +
Sbjct: 1877 NLPQFSADLYTVTVFENTEIGTYVAKLLANDVD-VGPNSNIIYSLLDS-ADGFFSIDEQT 1934
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ I + + LDRE+ Y L A D+G P
Sbjct: 1935 GV--------------------ISLERPLDRELQST-YELRALASDQGLP 1963
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N PVF Y+A V EN P GT VI ++A+D D G N ++ YS+
Sbjct: 1559 NKPVFESDPYEAVVVENLPSGTQVIQVRASDQD-SGTNGQVIYSL 1602
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y +T+ E P G + ++A+DAD ++ + + G + L + + G
Sbjct: 1140 NAPEFTQQTYNSTISELAPRGHFITQVQASDADSSDKDNLLFFFTSGNEDLNFSIDKHTG 1199
Query: 62 PL---NHFRI 68
+ NH R+
Sbjct: 1200 AILISNHRRV 1209
>gi|390459374|ref|XP_003732292.1| PREDICTED: protocadherin gamma-B1-like [Callithrix jacchus]
Length = 859
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG-GDGLG-YFTIDN 59
NAPVFS VY+ +++EN P GT V+ + A+D D G+N++I+YS + D +G F +DN
Sbjct: 237 NAPVFSQDVYKVSLRENVPPGTSVLKVTASDQD-EGINAEITYSFKSLRDDIGNLFVLDN 295
Query: 60 E 60
+
Sbjct: 296 Q 296
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAPVF Y V EN P G + + A+D D G+N ++SYS+
Sbjct: 447 NAPVFHQASYMVHVAENNPPGASIAQVSASDQD-LGLNGQVSYSI 490
>gi|167860146|ref|NP_989518.2| cadherin-7 precursor [Gallus gallus]
gi|17366584|sp|Q90763.1|CADH7_CHICK RecName: Full=Cadherin-7; Flags: Precursor
gi|868001|dbj|BAA07721.1| chicken cadherin-7 [Gallus gallus]
Length = 785
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G N+++ Y + GDGLG F I
Sbjct: 258 NPPRFPRRSYQYNVPESLPLASVVARIKAADAD-VGPNAEMEYKIVDGDGLGVFKI---- 312
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+D T +E I + K LD E A Y L + A + PR
Sbjct: 313 ----------SVDKDT--QEGIITIQKELDFE-AKTSYTLRIEAANMHVDPR 351
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 24/111 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNEGP 62
PVF+ +Y V E +GT++ T+ A DP NS + YS+ R D YF ID
Sbjct: 375 PVFTSRLYSMVVSEAAKVGTIIGTVAA--HDPDASNSPVRYSIDRNTDLERYFNIDANSG 432
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I K LDRE + +N+T+ A++ P +
Sbjct: 433 V--------------------ITTAKSLDRETNAV-HNITVLAMESQNPAQ 462
>gi|432090244|gb|ELK23677.1| Protocadherin alpha-2 [Myotis davidii]
Length = 3484
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 51/114 (44%), Gaps = 25/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG---GDGLGYFTID 58
NAP F VY+ + EN P GTL + + A+D D G+N I YS D L F +D
Sbjct: 1547 NAPAFERSVYEVRLSENAPNGTLAVIVNASDLD-EGVNKDIVYSFNADTSADTLSKFHLD 1605
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+N + I V LD E L Y + + A DKGTPP
Sbjct: 1606 ---PVNGY-----------------IRVKGNLDFEDTKL-YEIQVEATDKGTPP 1638
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 41/110 (37%), Positives = 52/110 (47%), Gaps = 19/110 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F VY+ + EN GTLVI L ++DAD G NS+I YS F+ D
Sbjct: 769 NEPAFDQSVYKVQLLENTANGTLVIKLNSSDAD-EGSNSEIVYS---------FSSDVPS 818
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ KIDP T + I LD E+A Y + + A DKGTP
Sbjct: 819 TIK----TKFKIDPSTGE----IRTKGQLDYEVAK-SYEIQVLAYDKGTP 859
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 19/115 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS VY+ + E GTLV TL A+DAD G+N ++ F ++
Sbjct: 238 NAPLFSQAVYRVHLLETIANGTLVTTLNASDAD-EGVNGEV-----------VFFFGSDV 285
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
P+N + KID + + I ++ LD E Y + ++AVDKG+PP +
Sbjct: 286 PVNIRKNF--KIDSSSGE----IRLIGELDYE-ETRSYEIQVKAVDKGSPPMSNH 333
Score = 42.4 bits (98), Expect = 0.060, Method: Composition-based stats.
Identities = 23/43 (53%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAP F VY+ + EN P GTLVI L A+DAD G+N +I Y
Sbjct: 2019 NAPEFDKSVYKVRLLENTPNGTLVIKLNASDAD-EGINKEIVY 2060
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
NAP+F +Y+ T+ EN P TLVI L A+DAD +N ++ YS
Sbjct: 2925 NAPIFDRSIYEVTMYENAPNQTLVIRLNASDADEE-INKELIYS 2967
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 20/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF V + + E++P G+ + A+D+D G NS ++Y + + YFT+D
Sbjct: 1438 NPPVFPVAVKKLFIYESRPPGSRIPLEGASDSD-IGANSLLTYVLSANE---YFTLD--- 1490
Query: 62 PLNHFRIVPTKIDPGTKK-KEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ K+ K +V+ KLL+RE P ++L + AVD G P
Sbjct: 1491 -----------VKRNDKEIKSLGLVLKKLLNREDTP-QHHLLIMAVDGGKP 1529
Score = 35.8 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP+F+ + VKEN P G + T+ A DAD N+++SYS+
Sbjct: 988 NAPLFAQPEHTVFVKENNPPGGHIFTVSARDADAQ-ENARVSYSL 1031
Score = 35.8 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP+F+ + VKEN P G + T+ A DAD N+++SYS+
Sbjct: 1760 NAPLFAQPEHTVFVKENNPPGGHIFTVSARDADAQ-ENARVSYSL 1803
Score = 35.8 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP+F+ + VKEN P G + T+ A DAD N+++SYS+
Sbjct: 2232 NAPLFAQPEHTVFVKENNPPGGHIFTVSARDADAQ-ENARVSYSL 2275
Score = 35.8 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP+F+ + VKEN P G + T+ A DAD N+++SYS+
Sbjct: 3138 NAPLFAQPEHTVFVKENNPPGGHIFTVSARDADAQ-ENARVSYSL 3181
Score = 35.8 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
NAP F Y+ + EN GT VI L A+D D G N ++SYS
Sbjct: 2514 NAPRFQQSEYEVRIFENSDNGTTVIRLNASDPD-EGTNQEVSYS 2556
>gi|351694356|gb|EHA97274.1| Cadherin-6 [Heterocephalus glaber]
Length = 790
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 65/124 (52%), Gaps = 12/124 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P+F++ VY ATV E +GT V+ + A DAD P G ++K+ YS+ G YF++++
Sbjct: 155 NEPIFTEEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQ--PYFSVES 212
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTP--PR 113
E + + +D +++ ++ K + ++ L N+TL V+ P P+
Sbjct: 213 ETGI--IKTALHNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQ 270
Query: 114 ETYK 117
TY+
Sbjct: 271 STYQ 274
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ E+ P GT + +KA+DAD G N+KI YS+ G+GL F + +
Sbjct: 264 NPPRFPQSTYQFKTAESSPPGTPIGRIKASDADV-GENAKIVYSITDGEGLDMFDVITDQ 322
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
I K+ KKK Y + V
Sbjct: 323 ETQEGIITVKKLLDFEKKKVYTLKV 347
>gi|340375455|ref|XP_003386250.1| PREDICTED: hypothetical protein LOC100634395 [Amphimedon
queenslandica]
Length = 9758
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 21/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVI-TLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P+F+ Y A V E+ I +VI ++ A+D D PG NS I+YS+ GG+ F ID +
Sbjct: 1497 NPPLFNKSGYAANVLESSSIDIVVIASIFASDIDSPGNNSNIAYSITGGNIGDSFAIDPD 1556
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ + G+ +DRE P +NLT+ A D G+P
Sbjct: 1557 TAI-------ITVASGS------------IDRETTPT-FNLTITASDYGSP 1587
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGT-LVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP+F Y ++ EN GT L + ++ +D D G+N++I Y + G+G F+IDN
Sbjct: 4743 NAPMFEKLNYSDSIVENSTSGTELGVRMQVSD-DDSGINAEIRYRISDGEGKDDFSIDNV 4801
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+ + V K LDRE Y LT+ A D G+P E
Sbjct: 4802 TGI--------------------VSVFKSLDRE-RQQSYTLTITAYDLGSPSLE 4834
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 46/115 (40%), Gaps = 27/115 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIG-TLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N PVF D Y T+ EN P+ + I A D G N +ISYS+ F I++
Sbjct: 971 NDPVFMDTHYMFTIAENLPVNPNMAIGTVTAIDDDSGQNKEISYSLN----TTRFIINST 1026
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
G I P + DRE+ P L + A D G PPR T
Sbjct: 1027 G-----SIFPNDV----------------FDRELTP-SIQLLVTATDNGVPPRHT 1059
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 49/114 (42%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++PVF+ Y+ ++ E +G + + A D D G N+ ISYS+ D F+ID
Sbjct: 1915 HSPVFTRTEYRESIPETAGVGYTALRVNATD-DDTGSNADISYSI-ADDDYSQFSIDE-- 1970
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
D GT I + D + P YNLT+ A D G P T
Sbjct: 1971 ------------DSGT------IYGMGSFDYDEEPRVYNLTITATDDGDEPLST 2006
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGM-NSKISYSVRGGDGLGYFTID 58
P FS +V EN PIG+ + L+A D D + N I YS+R G FT+D
Sbjct: 9171 PFFSPDSGNVSVSENTPIGSTIAILEAIDEDVINIHNDDIQYSIRNDPYDGLFTVD 9226
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 22/111 (19%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP+F++ Y A+V E P+G+ V T+ A+D D N++ +YS+ P
Sbjct: 8183 APMFTESNYIASVSEASPVGSSVATVSASDDDSSSPNNQFNYSIN--------------P 8228
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVL-KLLDREIAPLGYNLTLRAVDKGTPP 112
++F KIDP + ++ L K LDRE P + L + A+D G P
Sbjct: 8229 SSNFN-SSFKIDP-----VHGVITLDKSLDREQVPT-HELIVLAIDNGADP 8272
Score = 35.0 bits (79), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 10/87 (11%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL-----GYFTID 58
PVF +Y +V+E QP+G ++ ++A D D N+++ YS+ +GL G F+ID
Sbjct: 2238 PVFQRSIYNESVREIQPVGYVITYVRAIDIDSEP-NAQVRYSLI-DNGLNETDYGKFSID 2295
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIV 85
+ + + K+D T+ + Y+++
Sbjct: 2296 S---ITAALSIKEKLDFETEMRTYSLI 2319
>gi|348583469|ref|XP_003477495.1| PREDICTED: protocadherin-20-like [Cavia porcellus]
Length = 952
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + + T++EN + L A DAD G ++SY + G D YF++D+
Sbjct: 532 NAPVFLQPLIELTIEENNAPNAFLTKLYATDADS-GERGQVSYFL-GPDAPSYFSLDS-- 587
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ V T++D K+K Y T++AVD+G PPRE+
Sbjct: 588 -VTGILTVSTQLDREEKEK------------------YRYTVKAVDRGKPPRES 622
>gi|426229728|ref|XP_004008938.1| PREDICTED: protocadherin beta-10 [Ovis aries]
Length = 799
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 20/108 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS +Y+ EN P+G+ + + A DAD G+N+ ISYS F +E
Sbjct: 238 NAPQFSQAIYETQAPENSPVGSFIAQVSAGDAD-SGINADISYS---------FFDASED 287
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
L F I P + I++ LLD E+ Y + ++A+D G
Sbjct: 288 ILTTFHINPFSGE---------IILRLLLDYELVK-SYKINIQAIDGG 325
>gi|326673295|ref|XP_003199825.1| PREDICTED: protocadherin gamma-C4-like [Danio rerio]
Length = 792
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 53/114 (46%), Gaps = 19/114 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS VY +TV EN +GTLV+ + A+D+D G N ++SYS G + F I
Sbjct: 239 NRPMFSHDVYSSTVHENVQLGTLVLKVMASDSDY-GPNGEVSYSFGGDNSDNIFHI---- 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ RI G E N V Y L ++AVD G PP T
Sbjct: 294 -FSLDRITGEIRVTGEVDFEKNNV-------------YKLDIQAVDSGQPPLNT 333
Score = 35.8 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 21/116 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P V E+ GTL+ + D D G+N ++ S+
Sbjct: 347 NKPTIEVTSLSNVVSEDSKPGTLISLISVTDRDT-GINGRVVCSLS-------------- 391
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
H VP ++ P ++ +++V LDRE +++T+ A D G PP +YK
Sbjct: 392 --EH---VPFELKPSVQENMFSLVTKGKLDRETLS-HFDITITATDLGQPPLSSYK 441
>gi|26335563|dbj|BAC31482.1| unnamed protein product [Mus musculus]
Length = 796
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
NAP+F+ Y+ +V EN P+GT ++TL A DAD G+N+K+++S R
Sbjct: 238 NAPLFTQSEYRVSVPENTPVGTRLLTLTATDAD-EGINAKLTFSFR 282
Score = 35.8 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP ++V E+ GT++ DAD G N +IS S+
Sbjct: 343 NAPEVILTSLTSSVSEDCLPGTIIALFSVHDADS-GENGEISCSI--------------- 386
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
P N +P K++ Y+++ + LDRE YN+T+ VD+GTPP T
Sbjct: 387 PKN----LPFKLEKSVDNY-YHLLTTRALDREETS-DYNITVTVVDRGTPPLST 434
Score = 35.8 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N P FS Y ++ EN P G + ++ A DAD G N++++YS+
Sbjct: 448 NPPTFSRPFYSTSISENNPRGVSIFSVYAYDAD-SGDNAQVTYSL 491
>gi|410932565|ref|XP_003979664.1| PREDICTED: protocadherin gamma-A12-like, partial [Takifugu
rubripes]
Length = 712
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
NAPV S VY+A +KEN GT+V T+KA DAD G N ++SYS++
Sbjct: 243 NAPVCSQPVYKADIKENSAEGTVVTTVKANDAD-TGANGEVSYSIQ 287
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 22/116 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P + ++ E+ P GT + + DAD S R +G+ +I+++
Sbjct: 348 NIPTIQMMSFTHSISEDSPPGTTIAVVNVDDAD----------SER--NGVVKCSINSD- 394
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VP K++ + Y+IV LDRE P YN+T+ D+G+PP K
Sbjct: 395 -------VPFKME-SSLTGYYSIVTETFLDRESVP-KYNITITVSDQGSPPLSNTK 441
>gi|195401052|ref|XP_002059128.1| GJ16197 [Drosophila virilis]
gi|194156002|gb|EDW71186.1| GJ16197 [Drosophila virilis]
Length = 5168
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
+AP F+ YQ V EN+PIGT +IT+ A D D G N + Y++ GG+ YF ++
Sbjct: 3233 HAPEFNPRSYQVIVPENEPIGTTIITVSATDKD-TGPNGMLHYAISGGNERNYFNVN 3288
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 24/111 (21%)
Query: 4 PVFSDFVYQATVKENQ--PIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
P F D Y A V EN P G ++T+ A DAD P +N+++ Y ++ EG
Sbjct: 2389 PTFLDSPYIARVMENTLPPNGGYLLTVTAFDADTPPLNNQVRYFLK------------EG 2436
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ FRI + D IV+L LDRE+ Y LTL A+D G+PP
Sbjct: 2437 NADLFRINASTGD---------IVLLGTLDRELQN-EYILTLVAMDTGSPP 2477
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 31/57 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P FS + EN+P GT +ITL A+D D P + SY + GG +FTID
Sbjct: 3655 NGPTFSSDGLLGYISENEPAGTSIITLAASDPDLPHNGAPFSYKIVGGKHKAWFTID 3711
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 53/118 (44%), Gaps = 22/118 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y +T+ E+ P GT+V T+KA D D N++ +YS+ G+ F ID E
Sbjct: 3551 PEFVKRYYSSTILESVPPGTMVTTVKAIDKDVRPQNNQFTYSIINGNIKQSFKIDAETG- 3609
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
I LLDRE YNL + A+D G PP +T AT R
Sbjct: 3610 -------------------EISTAVLLDREDIAY-YNLVIGAIDTGLPP-QTGTATVR 3646
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 53/115 (46%), Gaps = 24/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y A+++EN P+G+LV+ A D D G+N K+ + + G+ + +F ID
Sbjct: 2494 NGPVFELQYYHASIQENLPVGSLVLKPVATDKD-TGLNGKLRFDLL-GEHMSHFHIDT-- 2549
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG-TPPRET 115
D G I +LDRE + Y LTL A D PR T
Sbjct: 2550 ------------DTG------EITTAAVLDRESIAV-YQLTLMAQDSSIIEPRAT 2585
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 20/102 (19%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
ATV EN GT+V + D+D G+N + + + G+ L +F ++ + PL H
Sbjct: 408 ATVDENASNGTVVAAVSVIDSDD-GLNGETTTRIVSGNELHHFRLE-KTPLFHI------ 459
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+ V +LDRE YNLT+ A+DKGTP R+
Sbjct: 460 -----------VRVNGVLDREEIS-KYNLTVVAIDKGTPERK 489
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF Y A + E P GT V ++ A D D G+N+++ Y + G+ L +F ID
Sbjct: 504 HEPVFEKSEYTAVLSELAPTGTFVTSIVATDED-TGVNAQVFYEILTGNELKWFNIDTTT 562
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
L IV LDRE+ L++ A D G P+ Y
Sbjct: 563 GL--------------------IVTTGPLDREVQA-SVELSISARDGGPNPKFAY 596
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAP F+ + +V E P GT ++ +A+DAD GMNS++ +S+ G+ F ID+
Sbjct: 1387 NAPEFTQSSSEISVLETSPSGTELMRFRASDAD-QGMNSQVVFSITAGNRRDTFHIDS 1443
Score = 42.0 bits (97), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N PVF Y A+V EN IG +V+ + A D D G N ++ YS+ GD F+I +
Sbjct: 2281 NIPVFDPKQYSASVAENASIGAMVLQVSATDMD-EGDNGRVRYSIVSGDQNRDFSISED 2338
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F Y + + EN +G V+T+ A D D G N I +S+ GD G F I++ G
Sbjct: 2048 NTPLFDPMSYSSEILENVLVGKEVVTVSAKDID-SGNNGLIEFSITAGDEDGDFWINSNG 2106
Query: 62 PLNHFR 67
++ R
Sbjct: 2107 TISTRR 2112
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS--VRGGDGLGYFTID 58
N PVF+ Y + EN+P+GT V A D D P N+ I YS RG D +F+I+
Sbjct: 3338 NPPVFNQSEYHGYIAENKPVGTAVFQAHATDKDSP-KNAIIHYSFLARGTDH-HFFSIN 3394
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAP F YQ T+ E+ P GT ++ + DAD G+N + Y++ G+ F +D+
Sbjct: 1281 NAPEFLRTPYQVTISEDAPEGTHIMHIFTKDAD-EGLNGDVYYTLVAGNEANLFGLDS 1337
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 45/110 (40%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PV +Y A + E + L++ +KA D D G N ++SY ++ D G F I + G
Sbjct: 2813 NPPVMEKLIYNAEIMEEETPPQLIVAIKAKDRD-SGENGEVSYRLK-NDYNGTFEIVDSG 2870
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I LDRE Y L + AVD+G P
Sbjct: 2871 ---------------------EIYTTMRLDREEFS-DYALVVEAVDQGVP 2898
>gi|351705925|gb|EHB08844.1| Cadherin-7 [Heterocephalus glaber]
Length = 785
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G N+++ Y + GDGLG F I
Sbjct: 258 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-IGANAEMEYKIVDGDGLGIFKI---- 312
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+D T +E I + K LD E A Y L + A +K R
Sbjct: 313 ----------SVDKDT--QEGIITIQKELDFE-AKTSYTLRIEAANKDADFR 351
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYMAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
>gi|170032325|ref|XP_001844032.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167872318|gb|EDS35701.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 644
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 55/118 (46%), Gaps = 23/118 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F Y + EN PI T V+T+ A D D G+N +I YS+ GD DNE
Sbjct: 220 NAPIFDPMSYSNEIFENVPISTDVVTVSATDTD-SGINGRIEYSITSGD-------DNE- 270
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
F+I+ GT I + LDRE + Y+L + A D P + +T
Sbjct: 271 ---DFQILSN----GT------IRTRRALDRE-SKSSYSLIVSARDCAKEPEKQLSST 314
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 11/105 (10%)
Query: 2 NAPVFSDFVYQATVKENQ--PIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID- 58
N P F D Y A V EN P G VIT++A DAD P NS++ Y ++ GD +F I+
Sbjct: 541 NPPTFLDSPYLAYVMENVIPPNGGYVITVRAYDADTPPFNSQVRYFLKEGD-TDFFKINA 599
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTL 103
+ G ++ R + ++ + EY I+ L +D E+ GYNL L
Sbjct: 600 STGEISLLRALDREM-----QAEY-ILTLVAMDTELDS-GYNLNL 637
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P+F Y A + EN IG V+ + A D D G N ++ +S+ GD FTI +
Sbjct: 430 NSPIFDPKQYSAAIAENASIGASVLQVSATDID-EGANGRVRFSIAAGDDNRDFTISEDS 488
>gi|119514222|gb|ABL75885.1| protocadherin 2G10 [Takifugu rubripes]
Length = 941
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVFS VY+A++ EN P+ T+V+ + A DAD G+NS+I+Y
Sbjct: 234 NAPVFSQAVYKASLPENSPLDTVVMQVSATDAD-EGVNSEITY 275
>gi|25989517|gb|AAM55476.1| cadherin-7 [Gallus gallus]
Length = 551
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G N+++ Y + GDGLG F I
Sbjct: 258 NPPRFPRRSYQYNVPESLPLASVVARIKAADAD-VGPNAEMEYKIVDGDGLGVFKI---- 312
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+D T +E I + K LD E A Y L + A + PR
Sbjct: 313 ----------SVDKDT--QEGIITIQKELDFE-AKTSYTLRIEAANMHVDPR 351
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 24/111 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNEGP 62
PVF+ +Y V E +GT++ T+ A DP NS + YS+ R D YF ID
Sbjct: 375 PVFTSRLYSMVVSEAAKVGTIIGTVAA--HDPDASNSPVRYSIDRNTDLERYFNIDANSG 432
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I K LDRE + +N+T+ A++ P +
Sbjct: 433 V--------------------ITTAKSLDRETNAV-HNITVLAMESQNPAQ 462
>gi|397518010|ref|XP_003829193.1| PREDICTED: protocadherin beta-9 [Pan paniscus]
Length = 797
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 20/108 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ +Y+ EN P+G+L++ + A DAD G+N+++SYS F +E
Sbjct: 238 NAPQFAQALYETQAPENSPVGSLIVKVSAGDAD-SGVNAEVSYS---------FFDASED 287
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
L F+I P + I + +LLD E+ Y + ++A+D G
Sbjct: 288 ILTTFQINPFSGE---------IFLRELLDYELVN-SYKINIQAMDGG 325
>gi|348514365|ref|XP_003444711.1| PREDICTED: protocadherin beta-15-like [Oreochromis niloticus]
Length = 1311
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS VY+A++ EN P+ T+V+ + A DAD G+N K++Y + G D
Sbjct: 235 NAPVFSQAVYKASLPENSPLYTVVVKVAATDAD-EGLNGKVTYELSRMSETGRRAFD--- 290
Query: 62 PLNHF 66
LNH
Sbjct: 291 -LNHI 294
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVFS VY+A++ EN P+ T+V+ + A DAD G+N ++SY
Sbjct: 996 NAPVFSQAVYKASIPENSPLNTVVVRVSATDAD-EGVNGEVSY 1037
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVF VY+A + EN + TLV+ + A+DAD G+N ++SY
Sbjct: 738 NAPVFDQAVYKANLPENSNLNTLVVIVSASDAD-EGVNGEVSY 779
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 22/96 (22%)
Query: 17 ENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPG 76
EN P GT V + D D N K+ S++ G VP K+ P
Sbjct: 355 ENAPPGTEVGIINVQDRDSEN-NGKVRCSIQQG-------------------VPFKLVPS 394
Query: 77 TKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K Y++V LDRE+ YN+T+ A D+G+PP
Sbjct: 395 IKNY-YSLVTAGQLDRELVS-DYNITITATDEGSPP 428
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 48/117 (41%), Gaps = 22/117 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPV EN P GT V + D D N ++ S++ G
Sbjct: 843 NAPVIYIKSMMNPTAENVPTGTEVGIINVQDRDSEN-NGQVRCSIQQG------------ 889
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
VP K+ P K Y++V LDRE+ YN+T+ A D+G+P + K
Sbjct: 890 -------VPFKLVPSIKNY-YSLVTTGQLDRELVS-DYNITITATDEGSPSLSSSKC 937
>gi|296189161|ref|XP_002742666.1| PREDICTED: protocadherin-20 [Callithrix jacchus]
Length = 952
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F + + T++EN + L A DAD G ++SY + G D YF++D+
Sbjct: 532 NAPIFLQPLIELTIEENNTPNAFLTKLHATDAD-SGERGQVSYFL-GPDAPSYFSLDS-- 587
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ V T++D K+K Y T+RAVD G PPRE+
Sbjct: 588 -VTGILTVSTQLDREEKEK------------------YRYTVRAVDCGKPPRES 622
>gi|292620547|ref|XP_002664336.1| PREDICTED: protocadherin beta-16-like [Danio rerio]
Length = 800
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR--GGDGLGYFTIDN 59
NAPV S VY+ ++ EN P GT++ T+ A+DAD G NS+I++S+ F ID+
Sbjct: 228 NAPVCSQTVYKTSIAENSPKGTVLTTVSASDAD-QGSNSRITFSISSTADKAADIFEIDS 286
Query: 60 E 60
E
Sbjct: 287 E 287
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVF YQA+V+EN G + T++A DAD N+++SY
Sbjct: 438 NAPVFEQSSYQASVQENNTPGLSIFTVRARDAD-FNQNARVSY 479
>gi|348514341|ref|XP_003444699.1| PREDICTED: protocadherin gamma-A11-like [Oreochromis niloticus]
Length = 870
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 21/107 (19%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
+ +++KE+ IGT V + D D G+N K+ +++ G VP
Sbjct: 642 FSSSIKEDSKIGTTVALISVTDLD-SGINGKVICAIKQG-------------------VP 681
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ P ++ Y IV + LDREI Y++T+ A D G PP T K
Sbjct: 682 FTLSPSLQENMYAIVTISQLDREITS-QYDVTIIAKDSGEPPHLTEK 727
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
N+PVF+ +Y AT+KEN P GT+VI + A D D G N +I YS
Sbjct: 525 NSPVFTKELYSATLKENIPTGTVVIQVNATDLD-QGANGEIIYS 567
>gi|119514242|gb|ABL75905.1| protocadherin 2G30 [Takifugu rubripes]
Length = 940
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAPVF+ VY+ T+ EN GT+V T+ A+D D G+NSKI+YS+
Sbjct: 228 NAPVFTQPVYKGTIAENAAKGTIVTTVSASDND-HGLNSKITYSI 271
>gi|126291013|ref|XP_001377871.1| PREDICTED: protocadherin gamma-A10 [Monodelphis domestica]
Length = 827
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
N PVF+ +Y V EN P GTL+IT+ A+D D G+N +++YS R
Sbjct: 235 NPPVFTQLIYSVNVPENVPKGTLLITVNASDPD-EGINGEVAYSFR 279
>gi|326673377|ref|XP_003199865.1| PREDICTED: protocadherin beta-16-like [Danio rerio]
Length = 827
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
NAPVFS VY+ ++ EN P+ T+V+T+ A DAD G N +++Y+
Sbjct: 260 NAPVFSQTVYKVSLPENSPVDTVVVTVSATDAD-EGQNGEVTYA 302
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F + V + V+E+ G+ + +A DAD GMNS SY+++ D
Sbjct: 151 NSPQFKESVIKFEVQESADKGSRYLLDEAHDADI-GMNSVQSYTLQNND----------- 198
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
HF + D G K E +V+ K LDRE L L AVD GTPPR
Sbjct: 199 ---HFVLNIHNGDSGGKYGE--LVLNKELDRE-QQKEVTLILTAVDGGTPPR 244
>gi|324500414|gb|ADY40196.1| Cadherin-related hmr-1, partial [Ascaris suum]
Length = 1776
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 23/118 (19%)
Query: 2 NAPVFSDFVYQATVKENQP---IGTLVITLKAADADPPGM-NSKISYSVRGGDGLGYFTI 57
NAP+F++ ++ TV EN+ G V+T A D D P N+K+ YS+ + I
Sbjct: 1563 NAPIFANDLF-GTVDENREPGYEGVYVMTASATDYDDPRTDNAKLEYSISVNKEIDGVPI 1621
Query: 58 DNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREI-APLGYNLTLRAVDKGTPPRE 114
FRIVP+ I ++ LDRE+ + + + +RA DKGTPPRE
Sbjct: 1622 --------FRIVPSN---------GKIYAMRKLDRELPSERQFVIEVRATDKGTPPRE 1662
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 23/111 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y AT +E+ PIG ++T+ A D D G N+ I YSV + F+I+ G
Sbjct: 661 NPPMFTQPLYTATTREDIPIGKAILTVHADDKD-SGENAHIIYSVEDRN----FSINENG 715
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
++ ++D ++ + I Y + A D+G PP
Sbjct: 716 EIS----ARLRLDADQHRERFFI--------------YRFNVTATDRGDPP 748
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y+ ++ N IG V+T+ A D+D P N++I+YS+ + G D+
Sbjct: 999 NAPQFDRASYETSISRNVAIGYSVVTVFADDSDAP-QNARITYSLAEDNSAGPIYKDD-- 1055
Query: 62 PLNHFRIV 69
+N FRI+
Sbjct: 1056 -INFFRIM 1062
>gi|193207741|ref|NP_506256.3| Protein FMI-1 [Caenorhabditis elegans]
gi|37048691|gb|AAQ84880.1| flamingo-like protein FMI-1 [Caenorhabditis elegans]
gi|169402906|emb|CAB01427.3| Protein FMI-1 [Caenorhabditis elegans]
Length = 2596
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 51/114 (44%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P+F Y ++E+ PIGT V+++ A D D G N +I YS+ G+G I+
Sbjct: 266 NSPIFEKDSYFGEIREDAPIGTTVLSVFARDLDS-GENGEIEYSLGEGNGKNLLAIN--- 321
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
K I LDRE L L + A DKGTP RE+
Sbjct: 322 -----------------AKSGVIQTAAPLDRETLSL-IRLDVIASDKGTPKRES 357
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAPVF+ Y T+ EN I ++ T+KA D D G N K+ YS+ G+G TID
Sbjct: 371 NAPVFASDSYNVTILENITIPAVIATVKATDED-FGTNGKVHYSMASSSGIGGLTID 426
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y + EN P+G+ V T+ A DAD G N+ IS+ + GG F I+ +
Sbjct: 888 NAPTFEQLSYDLYIAENSPVGSTVGTIVARDAD-EGDNADISFRIFGGADAKLFDIEEDA 946
Query: 62 PLN 64
N
Sbjct: 947 EQN 949
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 25/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+D + + E+ PIG VITLKA D D G N++I YS+ D +F
Sbjct: 678 SAPYFNDHPFSVKIPEHSPIGYPVITLKAEDHD-RGDNARIVYSI---DSSQFF------ 727
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+IDP + +I V LDRE +++ + A D +PP T
Sbjct: 728 ----------RIDPSSG----DISVSSDLDREDRAT-FSVIVTASDHASPPLNT 766
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
NAP F Y T+ E P G+ +ITLKA D D + KI+Y + D
Sbjct: 577 NAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDE---DQKITYRIEEAD 622
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 17/122 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTID- 58
N+P F+ Y AT+ E+ P+GT + + A DAD P G+ + F +D
Sbjct: 780 NSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDR 839
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE------IAPLGYNLTLRAVDKGTPP 112
G L V +K+D ++++ ++VL + R+ A LTL V+ P
Sbjct: 840 TSGTLR----VSSKLD----REQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPT 891
Query: 113 RE 114
E
Sbjct: 892 FE 893
>gi|47086889|ref|NP_997736.1| protocadherin 10a precursor [Danio rerio]
gi|42542548|gb|AAH66445.1| Protocadherin 10a [Danio rerio]
Length = 1001
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F VY +++EN P+GTLVI L A+D D G N +I YS+
Sbjct: 225 NAPTFDQSVYSVSLRENSPVGTLVIQLNASDMD-EGQNGEIVYSL 268
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 51/117 (43%), Gaps = 27/117 (23%)
Query: 2 NAP-VFSDFVYQATVKENQP----IGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT 56
NAP V + T +E+ P G LV + A DAD G N+++SYS+ G+ LG F
Sbjct: 548 NAPSVIAPLGKNGTAREHLPRSAEPGYLVTRIVATDADD-GENARLSYSILRGNELGMFR 606
Query: 57 ID-NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+D G L R V +K DP P Y+L + D G PP
Sbjct: 607 MDWRTGELRTARRVSSKRDP--------------------PHPYDLLIEVRDHGQPP 643
Score = 35.4 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 25/127 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-----VRGGDGLGYFT 56
NAP F VY V EN G + + A D D G N+ ++YS ++G L Y +
Sbjct: 438 NAPRFMQSVYDVYVTENNVPGAYIYAVSAVDPD-VGQNAYVTYSILECEIQGMSILTYVS 496
Query: 57 IDNEG------------PLNHFRIVPTKIDPG----TKKKEYNIVVLKLLDRE---IAPL 97
I++E + F + D G T N++++ D IAPL
Sbjct: 497 INSENGYLYALRSFDYEQIKEFSFMVHAKDSGAPELTANATVNVIIVDQNDNAPSVIAPL 556
Query: 98 GYNLTLR 104
G N T R
Sbjct: 557 GKNGTAR 563
>gi|326917391|ref|XP_003204983.1| PREDICTED: cadherin-7-like [Meleagris gallopavo]
Length = 758
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G N+++ Y + GDGLG F I
Sbjct: 231 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-VGPNAEMEYKIVDGDGLGVFKI---- 285
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+D T +E I + K LD E A Y L + A + PR
Sbjct: 286 ----------SVDKDT--QEGIITIQKELDFE-AKTSYTLRIEAANIHVDPR 324
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 47/109 (43%), Gaps = 24/109 (22%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNEGP 62
PVF+ +Y V E IGT++ T+ A DP NS + YS+ R D YF ID
Sbjct: 348 PVFTSRLYSMVVSEAAKIGTIIGTVAA--HDPDASNSPVRYSIDRNTDLERYFNIDANSG 405
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ I K LDRE + +N+T+ A++ P
Sbjct: 406 V--------------------ITTAKSLDRETNAI-HNITVLAMESQNP 433
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 122 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 178
>gi|326673385|ref|XP_003199868.1| PREDICTED: protocadherin gamma-A6-like [Danio rerio]
Length = 806
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
NAPVFS VY+ ++ EN P+ T+V+T+ A DAD G N +++Y+
Sbjct: 239 NAPVFSQAVYKVSLPENSPVDTVVVTVSATDAD-EGQNGEVTYA 281
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 38 MNSKISYSVRGGDGLGYFTIDNEGPLNHFRI-------VPTKIDPGTKKKEYNIVVLKLL 90
+NS + S G +G + + N+ ++ VP K+ P K Y++V L
Sbjct: 353 LNSPVPESALPGTEVGIINVQDRDSENNGQVRCSIQQNVPFKLVPSIKNY-YSLVTTGEL 411
Query: 91 DREIAPLGYNLTLRAVDKGTPPRETYK 117
DRE+ YN+T+ A D+G+PP + K
Sbjct: 412 DRELLS-EYNITITATDEGSPPLSSTK 437
>gi|292620533|ref|XP_002664330.1| PREDICTED: protocadherin gamma-A11-like [Danio rerio]
Length = 810
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
NAPVFS VY+ ++ EN P+ T+V+T+ A DAD G N +++Y+
Sbjct: 239 NAPVFSQAVYKVSLPENSPVDTVVVTVSATDAD-EGQNGEVTYA 281
Score = 35.4 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 14/106 (13%)
Query: 24 LVITLKAADADPP-----GMNSKISYSVRGGDGLGYFTIDNEGPLNHFRI-------VPT 71
+VI L + + P + S + S G +G + + N+ ++ VP
Sbjct: 334 VVINLSDVNDNAPEIRLKSLRSPVPESALPGTEVGIINVQDRDSENNGQVRCSIQQNVPF 393
Query: 72 KIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
K+ P K Y++V LDRE+ YN+T+ A D+G+PP + K
Sbjct: 394 KLVPSIKNY-YSLVTTGELDRELLS-EYNITITATDEGSPPLSSTK 437
>gi|326673325|ref|XP_003199840.1| PREDICTED: protocadherin alpha-3-like [Danio rerio]
Length = 813
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 55/121 (45%), Gaps = 31/121 (25%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS +Y+A++ EN PIG+ VI + A D D G NS I YS+R D +
Sbjct: 237 NAPVFSRPLYKASLVENVPIGSTVIIINATDKDE-GTNSDIIYSLR--------ETDQDH 287
Query: 62 PLNHFRI------VPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
L+ F+I + K D +K + + +A DKG PP T
Sbjct: 288 ILDIFQIDAITGAITVKGDVNFEKNN----------------AFEIRAQASDKGQPPMST 331
Query: 116 Y 116
+
Sbjct: 332 H 332
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 22/100 (22%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
+TVKE+ IGT V + D D G +G+ + N VP K
Sbjct: 356 STVKEDASIGTAVALVSVIDRDG------------GRNGVVNCAVSNN--------VPFK 395
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ K Y++VV LDRE A YN+T+ A D+G+PP
Sbjct: 396 LQTNYKNY-YSLVVDGPLDRERAS-EYNVTISAADEGSPP 433
>gi|195550841|ref|XP_002076115.1| GD11989 [Drosophila simulans]
gi|194201764|gb|EDX15340.1| GD11989 [Drosophila simulans]
Length = 355
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 22/104 (21%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
ATV EN GT+V + D+D G+N + S + G+ LG+F ++ L+ R
Sbjct: 193 ATVDENAVNGTVVAAVAVKDSDS-GLNGRTSVRIVSGNELGHFRLEEAADLHIVR----- 246
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVDKGTPPRET 115
V +LDRE +G YNLT+ A+D+GTP R T
Sbjct: 247 -------------VNGVLDRE--EIGKYNLTVVAMDQGTPARTT 275
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID--- 58
+ PVF Y A + E P G+ V ++ A D D G+N+++ Y + G+ L +F++D
Sbjct: 289 HEPVFEKSEYSAVLSELAPTGSFVASITATDED-TGVNAQVHYDILSGNELKWFSMDPLT 347
Query: 59 --NEGPLN 64
E PLN
Sbjct: 348 ERFETPLN 355
>gi|14195616|ref|NP_061992.2| protocadherin beta-9 precursor [Homo sapiens]
gi|13431372|sp|Q9Y5E1.2|PCDB9_HUMAN RecName: Full=Protocadherin beta-9; Short=PCDH-beta-9; AltName:
Full=Protocadherin-3H; Flags: Precursor
gi|11142065|gb|AAD43763.2|AF152502_1 protocadherin beta 9 [Homo sapiens]
gi|85662638|gb|AAI05641.1| Protocadherin beta 9 [Homo sapiens]
gi|119582378|gb|EAW61974.1| protocadherin beta 9 [Homo sapiens]
Length = 797
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 20/108 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ +Y+ EN P+G+L++ + A DAD G+N+++SYS F +E
Sbjct: 238 NAPQFAQALYETQAPENSPVGSLIVKVSAGDAD-SGVNAEVSYS---------FFDASED 287
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
L F+I P + I + +LLD E+ Y + ++A+D G
Sbjct: 288 ILTTFQINPFSGE---------IFLRELLDYELVN-SYKINIQAMDGG 325
>gi|345311428|ref|XP_001516332.2| PREDICTED: protocadherin gamma-A10-like, partial [Ornithorhynchus
anatinus]
Length = 807
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
NAPVF+ VYQ V+E+ P+GT V+T+ A D D G+N ++YS R
Sbjct: 238 NAPVFTQSVYQVRVREDVPMGTRVVTVNATDPD-EGVNGHVTYSFR 282
>gi|8926617|gb|AAF81913.1|AF217749_1 protocadherin beta 9 [Homo sapiens]
Length = 797
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 20/108 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ +Y+ EN P+G+L++ + A DAD G+N+++SYS F +E
Sbjct: 238 NAPQFAQALYETQAPENSPVGSLIVKVSAGDAD-SGVNAEVSYS---------FFDASED 287
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
L F+I P + I + +LLD E+ Y + ++A+D G
Sbjct: 288 ILTTFQINPFSGE---------IFLRELLDYELVN-SYKINIQAMDGG 325
>gi|327281345|ref|XP_003225409.1| PREDICTED: neural-cadherin-like [Anolis carolinensis]
Length = 2607
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 25/114 (21%)
Query: 2 NAPVF-SDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR-GGDGLGYFTIDN 59
+ PVF S V + EN P+GT +IT+ A D D +N I YS++ D G F +D
Sbjct: 1330 HTPVFNSQLVQLSPFYENIPVGTTIITVTATDED-SNLNGAIEYSIQLDSDPTGQFAVDQ 1388
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+G ++ V K LDRE A Y L ++A D+G P +
Sbjct: 1389 DG---------------------HVTVSKSLDRE-ATQAYGLIVQASDQGVPAQ 1420
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F+ VY+ V E+Q +G+ VIT+ A D D G N+K+ Y + G+ G F ++ E
Sbjct: 900 NKPSFTKNVYEVNVDEDQDVGSTVITVSANDED-EGTNAKLRYQITAGNTGGVFDVEPE 957
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P FS VY++ V E+ TL+ T+ A D D G +SYS+ GG+ +G F ID + L
Sbjct: 359 PKFSQPVYRSFVSEDAGPNTLIATVHAIDPDGDG----VSYSITGGNQMGNFIIDPQKGL 414
Query: 64 NHFRIVPTKIDPGTKKKEY 82
R P P + +EY
Sbjct: 415 IRLRSNPP---PKLQGQEY 430
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 12/99 (12%)
Query: 4 PVFSD---FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG-LGYFTID- 58
P+F + A+V ENQP+GT V+ ++A DAD G N ++ Y + DG L F ID
Sbjct: 466 PIFQKCQHYREHASVLENQPVGTFVLRVEATDAD-EGTNGEVKYGLMHRDGALPMFNIDP 524
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPL 97
+ G L +I + K++E+ I V D+ PL
Sbjct: 525 DTGVLTTLQIFDRE-----KQREHPITVTA-TDQAAEPL 557
Score = 38.9 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N P F+ +Y+A+V E +GT+V + A D D G N +I+YS+
Sbjct: 785 NVPFFTSSIYEASVTEGADVGTMVFQVSATDLD-LGQNGEITYSL 828
>gi|126291023|ref|XP_001377899.1| PREDICTED: protocadherin gamma-A5 [Monodelphis domestica]
Length = 846
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
NAPVF+ +Y +V+EN P GTL++ + A D+D G+N +++YS R D
Sbjct: 237 NAPVFTQSMYSVSVRENVPKGTLLLAVNATDSD-EGINGEVTYSFRNID 284
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P + +++ EN P GT++ LK D D G N I+ S+ G
Sbjct: 342 NPPEVMVTSFSSSIPENSPPGTVIALLKVHDRD-SGNNGHITCSIPGH------------ 388
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+P K++ + Y++V ++LDRE A + YN+T+ A+D+GTP
Sbjct: 389 -------LPFKLEK-SYANYYSLVTDRILDREQASM-YNVTVTAIDQGTP 429
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR-----GGDGLGYFT 56
N P FS Y A + EN P G+ + ++ A+D+D NS+I+YS+ G Y +
Sbjct: 447 NPPHFSQTSYSAYIPENNPRGSSIYSVIASDSDTE-ENSRITYSISDYIFYGASLSSYIS 505
Query: 57 IDNE 60
I++E
Sbjct: 506 INSE 509
>gi|432879582|ref|XP_004073498.1| PREDICTED: uncharacterized protein LOC101171591 [Oryzias latipes]
Length = 3795
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 24/44 (54%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
N+PVF+ Y AT+KEN PIGT+VI + A D D G N++I YS
Sbjct: 1769 NSPVFTKETYSATIKENIPIGTVVIQVNATDLD-KGANAEIIYS 1811
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 40/117 (34%), Positives = 55/117 (47%), Gaps = 19/117 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F++ Y T+KEN P GT VI + A+D D G N ++ YS FT N
Sbjct: 982 NAPIFNEDDYSVTLKENAPTGTTVIQVNASDLD-DGTNGEVVYS---------FT--NSV 1029
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
N R+ + G I V +D E Y + ++A DKGT P T K+
Sbjct: 1030 NTNILRLFGLNTETG------EITVKGQIDYEEKD-KYEIEIQASDKGTVPLTTEKS 1079
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
NAPVFS VY T++EN PIG+ V+ + A+D D G N ++ YS
Sbjct: 3246 NAPVFSRDVYSVTLEENSPIGSTVLKVNASDLD-EGRNGEVVYS 3288
Score = 43.5 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P + ++KE+ IGT V + D+D G+N K+ +++
Sbjct: 1877 NPPEIEVTSFSNSIKEDSKIGTTVALISVRDSDS-GINGKVICTIK-------------- 1921
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ VP + P K+ + +V + LDREI P Y+LT+ A D G P
Sbjct: 1922 -----QDVPFTLSPSLKENLFAVVSMSQLDREITP-HYDLTIIAKDSGDP 1965
Score = 42.4 bits (98), Expect = 0.065, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
N+PVF+ Y A ++EN PI T+VI + A D D G N++I YS
Sbjct: 239 NSPVFTKETYSAKIRENIPIDTVVIQVNATDLD-KGANAEIVYS 281
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 21/116 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P + +++ E+ GT V + +D D G+N K+S S+
Sbjct: 1090 NTPEIEFTSFSSSIPEDARTGTTVALVSLSDLDS-GLNGKVSCSID-------------- 1134
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+IVP + + K +++V+ LDRE + Y+LT+ A D G PP + K
Sbjct: 1135 -----KIVPFDLSQSVEDKMFSLVIKAPLDREKQSI-YDLTIIAKDAGQPPLSSEK 1184
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
PVFS Y A +KEN P+GT VI + A D D G N +I YS
Sbjct: 2873 PVFSQDSYVAHLKENAPVGTTVIQVSATDLD-EGSNGEIVYS 2913
Score = 40.0 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
N PVFS Y A +KEN P+GT VI + A D D N +I YS
Sbjct: 2527 NPPVFSQDSYVAHLKENAPVGTTVIQVSATDLDESS-NGEIVYS 2569
Score = 39.3 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P + ++KE+ IGT V + D+D G+N K+ +++
Sbjct: 347 NPPEIEVTSFSNSIKEDSKIGTTVALISVRDSD-SGINGKVICTIK-------------- 391
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ VP + K+ + +V + LDREI P Y++T+ A D G P
Sbjct: 392 -----QDVPFTLSTSLKENMFAVVSMSHLDREITP-HYDVTIIAKDSGDP 435
>gi|348582890|ref|XP_003477209.1| PREDICTED: protocadherin alpha-1-like [Cavia porcellus]
Length = 808
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 40/120 (33%), Positives = 58/120 (48%), Gaps = 29/120 (24%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF +Y+ + E GTLVITL A+DAD G+N ++ +S G D
Sbjct: 238 NAPVFDQALYKVHLLETTANGTLVITLNASDAD-EGVNGEVVFSF-GSD----------- 284
Query: 62 PLNHFRIVPT-----KIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
I P KI+P + + I ++ LD E Y + ++AVDKG+PP +
Sbjct: 285 ------ISPNIQEKFKIEPSSGE----IRLIDNLDYEDTK-SYEIQIKAVDKGSPPMSNH 333
Score = 38.5 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 18/113 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF + + EN+ + + AADAD G N+ ++Y++ D YF++D +
Sbjct: 129 NPPVFRGRQQRVFISENRQLSSRFPIEGAADAD-IGSNALLTYTLSSND---YFSLDVQA 184
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
K ++ + K LDRE P + L LRA D G P E
Sbjct: 185 -------------SDELSKSLSLKLRKALDREATP-EFRLLLRATDGGKPELE 223
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP+F+ Y VKEN P G + T+ A DAD N+ +SYS+
Sbjct: 451 NAPLFAQPEYTVFVKENNPPGAHIFTVCARDADAQ-ENALVSYSL 494
>gi|56606146|ref|NP_001008483.1| protocadherin 2 alpha b 5 precursor [Danio rerio]
gi|53748810|dbj|BAD52322.1| cadherin-related neuronal receptor variable 5 [Danio rerio]
Length = 941
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 55/121 (45%), Gaps = 31/121 (25%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS +Y+A++ EN PIG+ VI + A D D G NS I YS+R D +
Sbjct: 237 NAPVFSRPLYKASLVENVPIGSTVIIINATDKDE-GTNSDIIYSLR--------ETDQDH 287
Query: 62 PLNHFRI------VPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
L+ F+I + K D +K + + +A DKG PP T
Sbjct: 288 ILDIFQIDAITGAITVKGDVNFEKNN----------------AFEIRAQASDKGQPPMST 331
Query: 116 Y 116
+
Sbjct: 332 H 332
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 22/100 (22%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
+TVKE+ IGT V + D D G +G+ + N VP K
Sbjct: 356 STVKEDASIGTAVALVSVIDRD------------GGRNGVVNCAVSNN--------VPFK 395
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ K Y++VV LDRE A YN+T+ A D+G+PP
Sbjct: 396 LQTNYKNY-YSLVVDGPLDRERAS-EYNVTISAADEGSPP 433
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 18/111 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F + V VKEN IG ++ T+ A D D G N++I+YS+ N G
Sbjct: 450 NAPRFPEPVINVYVKENSQIGAVLHTVSAVDPD-VGDNARITYSL--------LESSNSG 500
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+ + + + +N +K + ++A D G PP
Sbjct: 501 PVTSMININSDTGDLHSLQSFNYEEIKT---------FEFKVQATDSGVPP 542
>gi|351710309|gb|EHB13228.1| Cadherin EGF LAG seven-pass G-type receptor 1 [Heterocephalus
glaber]
Length = 3064
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 42/118 (35%), Positives = 58/118 (49%), Gaps = 19/118 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY-------SVRGGDGLGY 54
NAP+F +QATV EN P+G V+ ++A DAD G NS++ Y + GGD G
Sbjct: 389 NAPIFVSSPFQATVLENVPLGHSVLHIQAVDAD-AGENSRLRYRLVDTSSAALGGDSAG- 446
Query: 55 FTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
D + L+ P +I + I V LDRE Y+ + AVD G+PP
Sbjct: 447 -PEDPDSTLD----FPFQIHNSSGW----ITVCAELDREEVE-HYSFGVEAVDHGSPP 494
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 24/110 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF Y +V E++P+GT + T+ A D D G N++I+Y + E P+
Sbjct: 615 PVFQSSHYTVSVSEDRPVGTSIATISATDED-TGENARITYVL-------------EDPV 660
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
FR IDP T I + LD E Y L + A D G P +
Sbjct: 661 PQFR-----IDPNTG----TIYTMTELDYE-DQAAYTLAITAQDNGIPQK 700
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 23/111 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++PVF Y+ V+EN +G V+T++A D D P N+ + Y + G G G F ID
Sbjct: 177 HSPVFEQSEYRERVRENLEVGYEVLTIRATDGDAPS-NANMRYRLLEGAG-GVFEIDARS 234
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ R V +DRE A Y L + A D+G P
Sbjct: 235 GVVRTRAV--------------------VDREEAA-EYQLLVEANDQGRNP 264
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N PVF+ +Y+ + E+ +G+ V+TL+A D D NS I+Y + GG+ F + ++
Sbjct: 511 NDPVFTQPLYELRLNEDAAVGSSVLTLRARDRDA---NSVITYQLTGGNTRNRFALSSQ 566
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVF + V+EN P+G++V ++A D D G N++I Y + G+ F +D
Sbjct: 823 NPPVFERDELELFVEENSPVGSVVAKIRANDPD-EGPNAQIMYQIVEGNMPEVFQLD 878
Score = 35.4 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN-E 60
N P FS+ Y V E+ + T V+ ++A D D G N+ I YS+ G+ G F + +
Sbjct: 283 NYPQFSEKRYVVQVPEDVAVNTPVLRVQATDRD-QGQNAAIHYSIVSGNLKGQFYLHSLS 341
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G L+ V+ LD E A Y L ++A D G PP
Sbjct: 342 GSLD---------------------VINPLDFE-AIREYTLRIKAQDGGRPP 371
>gi|26335715|dbj|BAC31558.1| unnamed protein product [Mus musculus]
Length = 932
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
NAP+F+ Y+ +V EN P+GT ++TL A DAD G+N+K+++S R
Sbjct: 238 NAPLFTQSEYRVSVPENTPVGTRLLTLTATDAD-EGINAKLTFSFR 282
Score = 35.8 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N P FS Y ++ EN P G + ++ A DAD G N++++YS+
Sbjct: 448 NPPTFSRPFYSTSISENNPRGVSIFSVYAYDAD-SGDNAQVTYSL 491
Score = 35.8 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP ++V E+ GT++ DAD G N +IS S+
Sbjct: 343 NAPEVILTSLTSSVSEDCLPGTIIALFSVHDADS-GENGEISCSI--------------- 386
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
P N +P K++ Y+++ + LDRE YN+T+ VD+GTPP T
Sbjct: 387 PKN----LPFKLEKSVDNY-YHLLTTRALDREETS-DYNITVTVVDRGTPPLST 434
>gi|18087761|ref|NP_291066.1| protocadherin gamma-A5 precursor [Mus musculus]
gi|13876336|gb|AAK26088.1| protocadherin gamma A5 [Mus musculus]
gi|34785777|gb|AAH57404.1| Protocadherin gamma subfamily A, 5 [Mus musculus]
gi|148678193|gb|EDL10140.1| mCG133388, isoform CRA_w [Mus musculus]
Length = 932
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
NAP+F+ Y+ +V EN P+GT ++TL A DAD G+N+K+++S R
Sbjct: 238 NAPLFTQSEYRVSVPENTPVGTRLLTLTATDAD-EGINAKLTFSFR 282
Score = 35.8 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N P FS Y ++ EN P G + ++ A DAD G N++++YS+
Sbjct: 448 NPPTFSRPFYSTSISENNPRGVSIFSVYAYDAD-SGDNAQVTYSL 491
Score = 35.8 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP ++V E+ GT++ DAD G N +IS S+
Sbjct: 343 NAPEVILTSLTSSVSEDCLPGTIIALFSVHDADS-GENGEISCSI--------------- 386
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
P N +P K++ Y+++ + LDRE YN+T+ VD+GTPP T
Sbjct: 387 PKN----LPFKLEKSVDNY-YHLLTTRALDREETS-DYNITVTVVDRGTPPLST 434
>gi|348514704|ref|XP_003444880.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3-like
[Oreochromis niloticus]
Length = 3519
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
NAP F YQ TV E+ P T ++ + A D D N ++ Y+ + G DG G FTI+ +
Sbjct: 1122 NAPQFLSPRYQGTVSEDAPSYTSILQISATDRDAHA-NGRVQYTFQNGEDGGGDFTIEPK 1180
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ + + LDRE P Y LT AVD+G P ++T
Sbjct: 1181 SGI--------------------VRNSRRLDRENVPF-YELTAYAVDRGVPSQQT 1214
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 51/108 (47%), Gaps = 19/108 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P FS + YQ V ENQP GT VI + A+D D G ++SY++ + N
Sbjct: 490 PHFSQYTYQVHVAENQPPGTSVIIMSASDPD-GGDAGRLSYTMA--------PLMNSRSS 540
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
++F I P D G I ++LDRE L Y + A D G+P
Sbjct: 541 DYFHIHP---DTGL------ITSTQILDREHMDLHY-FRVTATDHGSP 578
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 24/110 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF Y +V E+QP G+ ++ + A D D G N++I+ YF DN +
Sbjct: 1021 PVFQSAHYSVSVNEDQPPGSTIVVISATD-DDVGENARIT----------YFLEDN---I 1066
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
FR IDP T I + LD E + Y L + A D G P +
Sbjct: 1067 PQFR-----IDPATGA----ITLQAELDYE-DQMTYTLAITAKDNGIPQK 1106
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAPVF ++ VKEN +G++V + A D D G N++I Y + G+ F +D
Sbjct: 1228 NAPVFPADDFEVLVKENSAVGSVVAQITATDPD-EGANAQIMYQIVEGNIPEIFQMD 1283
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P+F +QA+V E+ PIG+ ++ ++A D D G N+++ Y + G F I+
Sbjct: 812 NPPIFVSTPFQASVLESAPIGSSILHIQAIDTD-SGDNARLEYRLTGTSSDTPFVIN 867
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS+ Y VKEN + ++ + A D D N+ + Y++ G+ G F+ID+
Sbjct: 706 NVPQFSEKRYVVAVKENVRPHSEILRVSATDRDKDS-NAVVHYNIISGNSRGQFSIDS-- 762
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I V+ LD E A Y L +RA D G PP
Sbjct: 763 ------------------VTGEIQVVAPLDYE-AEREYTLRVRAQDNGRPP 794
Score = 35.0 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N P F Y + E+ +GT V+T+ A D D +NS ++Y + GG+ F I
Sbjct: 917 NRPEFLQKEYYVRLNEDAAVGTSVVTVTAVDRD---VNSAVTYQITGGNTRNRFAI 969
>gi|332234698|ref|XP_003266543.1| PREDICTED: protocadherin alpha-3 isoform 1 [Nomascus leucogenys]
Length = 824
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 25/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR---GGDGLGYFTID 58
NAP F +Y+ + EN P GTLV+T+ A D D G+N I+YS D L F +D
Sbjct: 238 NAPAFERTIYKVRLFENAPNGTLVVTVNATDLD-EGVNKDIAYSFNTDMSADILSKFHLD 296
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+N V ID K Y + + A DKG PP
Sbjct: 297 ---PVNGQISVKGNIDFEESKS------------------YEIQVEATDKGNPP 329
Score = 38.5 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAPVF+ Y VKEN P G + T+ A DAD N+ +SYS+
Sbjct: 451 NAPVFAQSEYTVFVKENNPPGCHIFTVSARDADAQ-ENALVSYSL 494
Score = 35.8 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF V + E++ G+ A+DAD G NS ++YS+ D YFT+D +
Sbjct: 129 NAPVFPMAVKNLFISESRQPGSRFSLEGASDAD-IGTNSLLTYSL---DSTEYFTLDVK- 183
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
N I K +V+ K L+RE P Y L + A+D G P
Sbjct: 184 -RNDEEI-----------KSLGLVLKKNLNREDTPKHY-LLITAIDGGKP 220
>gi|326673381|ref|XP_003199867.1| PREDICTED: protocadherin beta-15-like [Danio rerio]
Length = 810
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
NAPVFS VY+ ++ EN P+ T+V+T+ A DAD G N +++Y+
Sbjct: 239 NAPVFSQAVYKVSLPENSPVDTVVVTVSATDAD-EGQNGEVTYA 281
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 38 MNSKISYSVRGGDGLGYFTIDNEGPLNHFRI-------VPTKIDPGTKKKEYNIVVLKLL 90
+NS + S G +G + + N+ ++ VP K+ P K Y++V L
Sbjct: 353 LNSPVPESALPGTEVGIINVQDRDSENNGQVRCSIQKNVPFKLVPSIKNY-YSLVTTGEL 411
Query: 91 DREIAPLGYNLTLRAVDKGTPPRETYK 117
DRE+ YN+T+ A D+G+PP + K
Sbjct: 412 DRELLS-EYNITITATDEGSPPLSSTK 437
Score = 36.2 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F + V + + E G+ + +A DAD GMNS SY+++ +NE
Sbjct: 130 NSPQFKENVIKFEMHELAVKGSRYLLDEAHDADI-GMNSVQSYTIQ----------NNE- 177
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
HF + G K E +V+ K LDRE L L AVD GTPPR
Sbjct: 178 ---HFLLSVITRPNGRKYGE--LVLNKELDRE-QQKEVTLILTAVDGGTPPR 223
>gi|195325632|gb|ACF95724.1| cadherin-6 [Mustela putorius furo]
Length = 607
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P+F+ VY ATV E +GT V+ + A DAD P G ++K+ YS+ G YF++++
Sbjct: 99 NEPIFTKDVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQ--PYFSVES 156
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTP--PR 113
E + + +D +++ ++ K + ++ L N+TL V+ P P+
Sbjct: 157 EAGI--IKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQ 214
Query: 114 ETYK 117
TY+
Sbjct: 215 STYQ 218
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ E+ P GT + +KA+DAD G N++I YS+ G+GL F +
Sbjct: 208 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDAD-MGENAEIEYSITEGEGLDMFDV---- 262
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
D T++ I V KLLD E + Y L + A + PR Y
Sbjct: 263 ----------VTDQETQEPGGVITVKKLLDFEKKKV-YTLKVEASNPHVEPRFLY 306
>gi|432950056|ref|XP_004084367.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1-like,
partial [Oryzias latipes]
Length = 1528
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 54/111 (48%), Gaps = 21/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQ +V E+ + T V+ + A+D D G N ++SY+ +GGD D EG
Sbjct: 878 NAPQFLRDRYQGSVFEDAQVRTSVLQISASDRD-SGPNGRVSYTFQGGD-------DGEG 929
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
F I P T +K LDRE P+ YNL AVD GT P
Sbjct: 930 ---DFFIEPYSGIIRTARK---------LDRENVPV-YNLKAFAVDGGTRP 967
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 53/111 (47%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS+ Y A V EN + T +I ++A D D G N+K+ YS+ G+ G F I +
Sbjct: 462 NYPQFSEKRYVAQVPENVAVNTKIIQVEAMDKD-EGNNAKVHYSIVSGNVKGQFYIHS-- 518
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PT + I V+ LD E+ YNL ++A D G PP
Sbjct: 519 --------PTGV----------IDVINPLDYEVIR-EYNLRIKAQDGGRPP 550
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 19/103 (18%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
YQ +V EN+P GT VITLKA D D G ++ YS+ +F ++ ++ F
Sbjct: 255 YQVSVPENEPPGTRVITLKATDPD-DGEAGRLVYSME-----AFF---DKRSIDFF---- 301
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+IDP T +I ++ LDRE+ Y + A D G+P R
Sbjct: 302 -EIDPQTG----SITTIQALDREVKDTHY-FKVSATDNGSPKR 338
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 48/112 (42%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL-GYFTIDNE 60
+ PVF Y+A+++EN +G V+T++A D D P N+ + Y + D + F ID
Sbjct: 354 HVPVFEQNEYRASIRENVEVGFEVMTIRATDGDAPS-NANMIYKIVNDDKVNSVFEIDAR 412
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L R P DRE A Y L + A D+G P
Sbjct: 413 SGLVRVRERP--------------------DRE-ARARYKLIVEANDRGKDP 443
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAPVF V+EN P+G++V + A D D G N++I Y + G+ F +D
Sbjct: 984 NAPVFEKDELFIDVEENSPVGSIVAQITATDPD-EGTNAQIMYQIVEGNFPEVFQLD 1039
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 45/109 (41%), Gaps = 22/109 (20%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP+F +QATV EN IG VI ++A D D G N+++ Y + FT++N
Sbjct: 569 APMFVSTPFQATVLENVAIGYSVIHIQAIDGD-SGENARLEYRLTDTSPGFPFTVNNSTG 627
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I V + LDRE Y + A D G P
Sbjct: 628 W--------------------ITVSEELDRETTEF-YTFGVEARDHGVP 655
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF YQ V E +P+G+ V + A D D G N++I+Y + D + F ID
Sbjct: 777 PVFQSSNYQVLVSEEKPVGSTVAMISATDED-TGENARITYIME--DNIPQFKID 828
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F++ Y + E+ +GT V+T+ A D D +N+ ++Y + G+ F I ++
Sbjct: 673 NVPTFTEKTYSLKINEDALVGTSVLTVTAVDRD---VNNVVAYQISSGNTRNRFAITSQS 729
>gi|66773316|ref|NP_001019299.1| protocadherin 1 gamma 32 [Danio rerio]
gi|50881558|gb|AAT85359.1| protocadherin cluster 1 gamma 32 [Danio rerio]
Length = 961
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 19/113 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F + + T+ EN P GTLV L A+DAD G N +ISY T D
Sbjct: 255 NAPHFLNPTKRVTLLENSPHGTLVTLLNASDAD-HGQNGEISY-----------TFDKYT 302
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
P + ++ +D T + I V L+D E+A + +++T+ A DKG PP E
Sbjct: 303 PDSVLKLF--SVDSVTGE----IRVTGLIDHELAKV-HDVTVLARDKGMPPME 348
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 22/117 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P S + + + E+ +GT++ +K D D G N +++ + G
Sbjct: 363 NTPEISINMVSSVISEDVTLGTVIALIKVKDEDT-GKNGEVNLHIPYG------------ 409
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
+P KI K + ++ LLDRE A Y +T+ A D G+PPR + K+
Sbjct: 410 -------LPFKIS-SPYKGLFTLMADGLLDRE-AVAEYTITVTATDSGSPPRSSQKS 457
>gi|351705785|gb|EHB08704.1| Protocadherin-20 [Heterocephalus glaber]
Length = 952
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + + T++EN + L A DAD G ++SY + G D YF++D+
Sbjct: 532 NAPVFLQPLVELTIEENNAPNAFLTKLYATDAD-SGERGQVSYFL-GPDAPSYFSLDS-- 587
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ V T++D K+K Y T+RAVD G PPRE+
Sbjct: 588 -VTGILTVSTQLDREEKEK------------------YRYTVRAVDCGKPPRES 622
>gi|157115805|ref|XP_001658290.1| cadherin [Aedes aegypti]
gi|108883460|gb|EAT47685.1| AAEL001196-PA [Aedes aegypti]
Length = 1653
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNE 60
N P F +A EN +G +++ KA D D G SKI+Y + R D F+I +E
Sbjct: 418 NTPRFRRPHMEAYTSENDEVGKTLVSFKAIDIDKAG-KSKITYMINRATDRKRQFSISDE 476
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
G + + + LDRE A YNL + A+D G PPR
Sbjct: 477 G---------------------TVTIQRQLDRE-AISKYNLEILAIDDGVPPR 507
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 49/110 (44%), Gaps = 17/110 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAP F +Y V EN +G V+T+KA D D G ++KI YS+ I+
Sbjct: 187 NAPSFPQGIYYGNVTENGTVGMYVMTIKAQDNDDVDEGTHAKIVYSIEKN------AIEE 240
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
E L F I P D G + LDRE P Y+L + A D G
Sbjct: 241 ETGLPIFDINP---DTGVI-----TTAVCCLDREKTP-DYSLQIVATDGG 281
>gi|47225228|emb|CAG09728.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1210
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 53/117 (45%), Gaps = 24/117 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N P+F D + TV EN P+GT V L A DAD G N++I +FT N+
Sbjct: 215 NRPIFKDSELEVTVPENAPMGTSVAQLHATDAD-LGSNAQI-----------HFTFSNQI 262
Query: 61 --GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
G HF ID T I V + LDRE+ P+ + L + TP R T
Sbjct: 263 SAGTKRHF-----SIDGSTGL----ITVKQSLDRELTPVHKLIVLASDGSSTPSRAT 310
>gi|326673389|ref|XP_003199870.1| PREDICTED: protocadherin gamma-A8-like [Danio rerio]
Length = 810
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVFS VY+ ++ EN P+ T+V+T+ A DAD G N K++Y
Sbjct: 233 NAPVFSQAVYKVSLPENSPVDTVVVTVSATDAD-EGQNGKVTY 274
>gi|149048782|gb|EDM01323.1| similar to FAT tumor suppressor homolog 4 (predicted) [Rattus
norvegicus]
Length = 1155
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF VY+ + E P G+ V + A D D G+N+ + YS+ G+GLG+F I
Sbjct: 473 PVFEQQVYRVNLSEEVPPGSYVSGVSATDGDS-GLNANLRYSIVSGNGLGWFHIS----- 526
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T G LDRE+A L + A D+G P+ +Y
Sbjct: 527 EHSGLVTTSAAGG-------------LDRELAS-QIVLNISARDQGVHPKVSY 565
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N+ I Y ++ +EG
Sbjct: 246 NPPVFGSSHYQAGVPEDAVVGSSVLQVAAADAD-EGTNADIRYRLQ-----------DEG 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P ++DP T I V + LD E A Y+LT++A D+G P
Sbjct: 294 -------TPFQMDPETGL----ITVREPLDFE-ARRQYSLTVQATDRGVP 331
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 51/110 (46%), Gaps = 24/110 (21%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD P N IS + GG NE HF + +K
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSPAANGNISVQILGG---------NEQ--RHFEVQRSK 413
Query: 73 IDPGTKKKEYNIVVLKL---LDREIAPLGYNLTLRAVDK-GTPPRETYKA 118
+ N+ ++K+ LDRE P YNLT+ D G PP +A
Sbjct: 414 VP--------NLSLIKVASALDRERIP-SYNLTVSVSDNSGAPPTAEVQA 454
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G VI A D+D G++ + SY + G+ G F +D
Sbjct: 131 NAPVFPDPSIVVTFKEDSGSGRQVILDTATDSDIGSNGVDHR-SYRIVRGNEAGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P R Y
Sbjct: 189 -----------ITLNPSGEGAFLHLVSKGGLDREVTP-QYQLLVEVEDKGEPKRRGY 233
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A ++EN+P G+ V T+ A D D G N + YS+ GD
Sbjct: 685 NSPVFYPVQYFAHIQENEPGGSYVTTVSATDPD-MGPNGTVKYSISAGD 732
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y+ T+ E++P+ + ++A D D G N +I+Y++ G+ F I +G
Sbjct: 992 NPPVFDQISYEVTLSESEPVNSRFFKVQALDKD-SGANGEIAYAITDGNSGEAFGIFPDG 1050
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D + + +VV DR + PL + + +
Sbjct: 1051 QL----YIKSELDRELQDRYVLLVVAS--DRAVEPLSATVNVTVI 1089
>gi|432951772|ref|XP_004084898.1| PREDICTED: protocadherin gamma-A12-like, partial [Oryzias latipes]
Length = 512
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR--GGDGLGYFTIDN 59
NAPVFS VY+ T+ EN P TLVIT+ A DAD G+N+ ++Y D + F ID
Sbjct: 233 NAPVFSQNVYKTTLPENSPPETLVITVSATDAD-EGVNADVTYQFGHVSDDDVHVFLIDQ 291
Query: 60 E 60
+
Sbjct: 292 K 292
Score = 39.3 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 22/116 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+ S +++ EN P GT V + D D N ++S S++
Sbjct: 338 NAPIISLKSLSSSIPENAPPGTEVGIINVQDRDS-DKNGQVSCSIQA-----------NA 385
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
P F++VP+ K Y++V LDRE+ YN+T+ A D+G+PP + K
Sbjct: 386 P---FKLVPSI------KNYYSVVSTGQLDRELVS-DYNITISATDEGSPPLSSSK 431
>gi|395516289|ref|XP_003762323.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Sarcophilus harrisii]
Length = 3975
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 40/116 (34%), Positives = 53/116 (45%), Gaps = 25/116 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
NAP F Y + E+ P T V+ + A D D N ++ Y+ + G DG G FTI+
Sbjct: 803 NAPQFVASYYPGVISEDAPPFTSVLQISATDRDAHA-NGRVQYTFQNGEDGDGDFTIE-- 859
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIV-VLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
PT IV ++ LDRE P+ Y LT AVD+G PP T
Sbjct: 860 ---------PTS----------GIVRTVRRLDRESVPV-YELTAYAVDRGVPPLRT 895
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y + E+ +GT V+++ A D D +NS ISY + GG+ F I +G
Sbjct: 598 NRPEFTQKEYHLRLNEDAAVGTSVLSVTAVDRD---INSAISYQITGGNTRNRFAISTQG 654
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREI 94
+ +V + K++ Y +++ DR +
Sbjct: 655 GMG---LVTLALPLDYKQERYYKLIVTASDRTL 684
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 49/110 (44%), Gaps = 24/110 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF Y +V E++P+G+ V+ + A D D G N++I+Y + D L F ID
Sbjct: 702 PVFQSAHYSVSVNEDRPVGSTVVVISATD-DDVGENARITYLLE--DNLPQFRID----- 753
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+D G I + LD E + Y L + A D G P +
Sbjct: 754 ---------VDSGA------ITLQAELDYE-DQVTYTLAITAKDNGIPQK 787
Score = 39.3 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP+F +Q +V EN P+G VI ++A DAD G N+++ Y + G +D
Sbjct: 493 HAPIFVSTPFQVSVLENAPLGHSVIHIQAVDAD-HGENARLEYKLTGT------ALD--- 542
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P ++ T I V LDRE Y + A+D G+PP
Sbjct: 543 -------TPFVVNSATGW----ITVSGPLDRESVE-HYFFGVEALDHGSPP 581
Score = 38.5 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS+ Y A V+E+ T V+ + A D D N+ + Y++ G+ G+F ID+
Sbjct: 387 NAPQFSEKRYLAQVREDVRPHTEVLRVTATDLD-KDTNALVHYNIISGNSRGHFAIDS-- 443
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I V+ LD E+ Y L +RA D G PP
Sbjct: 444 ------------------LTGEIQVVAPLDFEVER-EYALRIRAQDSGRPP 475
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 19/108 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F + YQA V ENQ GT V+++ A D D G ++SYS+ + N L
Sbjct: 173 PHFPQYNYQALVAENQAPGTSVLSVAAQDPD-AGEAGRLSYSMAA--------LMNSRSL 223
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ FR ID + I + LDRE L Y + A+D G+P
Sbjct: 224 DLFR-----IDAASGL----ISTAEPLDRESMDLHY-FRVTALDHGSP 261
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAPVF ++ VKEN +G++V + A D D G N++I Y + G+ F +D
Sbjct: 909 NAPVFPAEEFEVRVKENSIVGSVVAQITAIDPD-EGPNAQIMYQIVEGNIPELFQMD 964
>gi|332234700|ref|XP_003266544.1| PREDICTED: protocadherin alpha-3 isoform 2 [Nomascus leucogenys]
Length = 811
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 25/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR---GGDGLGYFTID 58
NAP F +Y+ + EN P GTLV+T+ A D D G+N I+YS D L F +D
Sbjct: 238 NAPAFERTIYKVRLFENAPNGTLVVTVNATDLD-EGVNKDIAYSFNTDMSADILSKFHLD 296
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+N V ID K Y + + A DKG PP
Sbjct: 297 ---PVNGQISVKGNIDFEESKS------------------YEIQVEATDKGNPP 329
Score = 38.5 bits (88), Expect = 0.88, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAPVF+ Y VKEN P G + T+ A DAD N+ +SYS+
Sbjct: 451 NAPVFAQSEYTVFVKENNPPGCHIFTVSARDADAQ-ENALVSYSL 494
Score = 35.8 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF V + E++ G+ A+DAD G NS ++YS+ D YFT+D +
Sbjct: 129 NAPVFPMAVKNLFISESRQPGSRFSLEGASDAD-IGTNSLLTYSL---DSTEYFTLDVK- 183
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
N I K +V+ K L+RE P Y L + A+D G P
Sbjct: 184 -RNDEEI-----------KSLGLVLKKNLNREDTPKHY-LLITAIDGGKP 220
>gi|332029981|gb|EGI69806.1| Protocadherin-like wing polarity protein stan [Acromyrmex
echinatior]
Length = 3164
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 17/121 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F Y A+V+E P+G+ VIT+KA D D G N+++ YS+ +I
Sbjct: 362 HTPSFEGPEYDASVREGVPVGSTVITVKATDQD-TGRNAEVEYSI--------VSIMAGS 412
Query: 62 PLNHFRIVPT-KIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP--RETYKA 118
+ H T +IDP + + LDRE + Y + L D+ TPP R + A
Sbjct: 413 SITHMEDTATFRIDP----RSGVVTTRTPLDREQTEI-YTVVLSVTDQATPPSARRSSNA 467
Query: 119 T 119
T
Sbjct: 468 T 468
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 19/109 (17%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F + Y +V E+ PIG V+ + A DAD G N++I+YS+ +G E
Sbjct: 801 SPEFENAPYSVSVFEDAPIGVTVLVVSATDAD-VGKNAQITYSLATDNG--------EQV 851
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ F I + I K LDRE P Y LT+ A D G P
Sbjct: 852 ITEFTI---------NSQTGAITTTKALDRESVP-SYLLTVTARDGGVP 890
Score = 42.0 bits (97), Expect = 0.074, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 24/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGT--LVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P F++ Y ATV E+ T ++ ++A DAD G N+ + Y++ GG+ F+ID+
Sbjct: 479 NYPQFTERTYSATVPEDLDYTTNPVIARIRAMDADA-GANAAVRYAIIGGNTQNTFSIDS 537
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
++ ++K LD E + Y + +RA D G+P R
Sbjct: 538 MNG--------------------DVTLVKPLDYE-STRSYKIVIRAQDGGSPAR 570
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF Y ++ E+ + T V+ + A DAD +N ++ Y + DG G FTID+
Sbjct: 908 NAPVFEAPQYHGSILEDVLLSTSVLRVAATDAD-TDLNGRVRYGLE-DDGDGAFTIDSTT 965
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ I K+LDRE Y L A D+G+P
Sbjct: 966 GI--------------------IRTAKILDRESVAY-YTLKAVATDRGSP 994
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F Y+A V E+ GT V T+ A D P +S+I Y + GG+ G F+I ++
Sbjct: 697 NDPYFEPKTYEAVVSEDSLAGTPVTTVTATD---PDEDSRIHYEITGGNTRGRFSISSQ 752
Score = 40.0 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 18/113 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F +Q +V E+ P+G ++ ++A DAD G N+ I Y++ D G
Sbjct: 586 NAPRFYTSHFQESVSESVPVGYSILRVQAYDAD-EGNNALIKYTIGARDFTG-------- 636
Query: 62 PLNHFRIVPTKIDPGTKKKEYN-IVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
T+ P T K E I K LDRE Y T+ A D G P+
Sbjct: 637 -------ASTENFPITVKAETGWIYTTKQLDREQCS-KYQFTVIAADSGEEPK 681
Score = 35.8 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NEGP 62
P F + + EN PIG+ V + A D D G N+ + YS+ GG+ F+++ +G
Sbjct: 1014 PAFENDKIILYITENSPIGSTVGEIYAHDPD-EGPNAVVQYSIIGGEDSNSFSLNVRQGA 1072
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVV 86
I ++D + KK++ +VV
Sbjct: 1073 DRAELITLEELDYESPKKKFELVV 1096
>gi|397518044|ref|XP_003829208.1| PREDICTED: protocadherin alpha-3 [Pan paniscus]
Length = 824
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 25/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR---GGDGLGYFTID 58
NAP F +Y+ + EN P GTLV+T+ A D D G+N I+YS D L F +D
Sbjct: 238 NAPAFERTIYKVRLLENAPNGTLVVTVNATDLD-EGVNKDIAYSFNTDMSADILSKFHLD 296
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+N V ID K Y + + A DKG PP
Sbjct: 297 ---PVNGQISVKGNIDFEESKS------------------YEIQVEATDKGNPP 329
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 29/117 (24%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGL--GYFT 56
NAP FS Y VKEN P G + T+ A DAD N+ +SYS+ R G+ Y +
Sbjct: 451 NAPAFSQSEYTVFVKENNPPGCHIFTVSARDADAQ-ENALVSYSLVERRVGERALSSYVS 509
Query: 57 IDNEG-------PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE--IAPLGYNLTLR 104
+ E PL+H +E ++ ++ R+ + PLG N+TL+
Sbjct: 510 VHAESGKVYALQPLDH--------------EELELLQFQVSARDAGVPPLGSNVTLQ 552
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF V + E++ G+ A+DAD G NS ++YS+ D YFT+D +
Sbjct: 129 NAPVFPMAVKNLFISESRQPGSRFSLEGASDAD-IGTNSLLTYSL---DSTEYFTLDVK- 183
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
N I K +V+ K L+RE P Y L + A+D G P
Sbjct: 184 -RNDEEI-----------KSLGLVLKKYLNREDTPKHY-LLITAIDGGKP 220
>gi|119514239|gb|ABL75902.1| protocadherin 2G27 [Takifugu rubripes]
Length = 940
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 59/108 (54%), Gaps = 20/108 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY+AT+ EN P GT ++T+ A D D G N +ISY++ +N+
Sbjct: 228 NAPVFTKSVYKATITENSPKGTSILTVSATDKD-TGSNREISYAIS----------NNKR 276
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
L+ +ID +K +++++ +D E + L + + + A+D G
Sbjct: 277 RLSEL----FQID----RKTGDVILIGEIDYEKSKL-FQIDIEAIDNG 315
>gi|14165410|ref|NP_113685.1| protocadherin alpha-3 isoform 2 precursor [Homo sapiens]
gi|5457011|gb|AAD43742.1|AF152481_1 protocadherin alpha 3 short form protein [Homo sapiens]
gi|3540167|gb|AAC34323.1| KIAA0345-like 11 [Homo sapiens]
Length = 824
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 25/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR---GGDGLGYFTID 58
NAP F +Y+ + EN P GTLV+T+ A D D G+N I+YS D L F +D
Sbjct: 238 NAPAFERTIYKVRLLENAPNGTLVVTVNATDLD-EGVNKDIAYSFNTDMSADILSKFHLD 296
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+N V ID K Y + + A DKG PP
Sbjct: 297 ---PVNGQISVKGNIDFEESKS------------------YEIQVEATDKGNPP 329
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 29/117 (24%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGL--GYFT 56
NAP FS Y VKEN P G + T+ A DAD N+ +SYS+ R G+ Y +
Sbjct: 451 NAPAFSQSEYTVFVKENNPPGCHIFTVSARDADAQ-ENALVSYSLVERRVGERALSSYVS 509
Query: 57 IDNEG-------PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE--IAPLGYNLTLR 104
+ E PL+H +E ++ ++ R+ + PLG N+TL+
Sbjct: 510 VHAESGKVYALQPLDH--------------EELELLQFQVSARDAGVPPLGSNVTLQ 552
Score = 35.8 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF V + E++ G+ A+DAD G NS ++YS+ D YFT+D +
Sbjct: 129 NAPVFPMAVKNLFISESRQPGSRFSLEGASDAD-IGTNSLLTYSL---DSTEYFTLDVK- 183
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
N I K +V+ K L+RE P Y L + A+D G P
Sbjct: 184 -RNDEEI-----------KSLGLVLKKNLNREDTPKHY-LLITAIDGGKP 220
>gi|53748792|dbj|BAD52309.1| cadherin-related neuronal receptor variable 5 [Danio rerio]
Length = 938
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 55/121 (45%), Gaps = 31/121 (25%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS +Y+A++ EN PIG+ VI + A D D G NS I YS+R D +
Sbjct: 234 NAPVFSRPLYKASLVENVPIGSTVIIINATDKDE-GTNSDIIYSLR--------ETDQDH 284
Query: 62 PLNHFRI------VPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
L+ F+I + K D +K + + +A DKG PP T
Sbjct: 285 ILDIFQIDAITGAITVKGDVNFEKNN----------------AFEIRAQASDKGQPPMST 328
Query: 116 Y 116
+
Sbjct: 329 H 329
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 22/100 (22%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
+TVKE+ IGT V + D D G +G+ + N VP K
Sbjct: 353 STVKEDASIGTAVALVSVIDRD------------GGRNGVVNCAVSNN--------VPFK 392
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ K Y++VV LDRE A YN+T+ A D+G+PP
Sbjct: 393 LQTNYKNY-YSLVVDGPLDRERAS-EYNVTISAADEGSPP 430
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 18/111 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F + V VKEN IG ++ T+ A D D G N++I+YS+ N G
Sbjct: 447 NAPRFPEPVINVYVKENSQIGAVLHTVSAVDPD-VGDNARITYSL--------LESSNSG 497
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+ + + + +N +K + ++A D G PP
Sbjct: 498 PVTSMININSDTGDLHSLQSFNYEEIKT---------FEFKVQATDSGVPP 539
>gi|157649933|gb|ABV59358.1| protocadherin nu11 [Callorhinchus milii]
Length = 991
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG 48
N+PV+S VY+ ++ EN P GTLV+T+ A D D G N++I+YS+ G
Sbjct: 239 NSPVYSQSVYRVSLPENTPRGTLVLTVNATDLD-EGYNAEIAYSLSG 284
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 19/109 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-----VRGGDGLGYFT 56
NAP F+ +Y A V EN +G+ + ++ A D D NS++SYS V G Y +
Sbjct: 452 NAPRFAQPLYTAHVMENNLVGSSIYSVTAYDPDSK-QNSRLSYSILESQVEGESVTSYVS 510
Query: 57 IDNEG------------PLNHFRIVPTKIDPGTKKKEYNIVV-LKLLDR 92
I+++ L HF+I+ D G N+ V + +LD+
Sbjct: 511 INSDTGIIYSQRAFDYEQLKHFQILVQAEDSGVPALSNNVSVDVTILDQ 559
>gi|326673319|ref|XP_003199837.1| PREDICTED: protocadherin beta-15-like [Danio rerio]
Length = 801
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 19/117 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y T+ EN P+GT V+ + A D+D G N ++ Y+ LG DN
Sbjct: 239 NVPVFTKETYTVTLNENAPVGTTVVQVNATDSD-EGQNGQVVYA------LGNNVNDNLR 291
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
L + + I+V LD EI + Y + ++A DKG P T K+
Sbjct: 292 KLFEVNSITGE-----------IIVTGFLDYEIKDI-YEIDIQASDKGIVPLATDKS 336
>gi|29436767|gb|AAH49814.1| Protocadherin gamma subfamily A, 4 [Mus musculus]
Length = 930
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
NAPVF+ Y +VKEN P+GT ++T+KA D D G+N +++YS R
Sbjct: 237 NAPVFTQPEYHISVKENLPVGTRLLTIKATDPD-EGVNGEVTYSFR 281
>gi|73768710|gb|AAI03495.1| PCDHB9 protein, partial [Homo sapiens]
Length = 796
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 20/108 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ +Y+ EN P+G+L++ + A DAD G+N+++SYS F +E
Sbjct: 237 NAPQFAQALYETQAPENSPVGSLIVKVSAGDAD-SGVNAEVSYS---------FFDASED 286
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
L F+I P + I + +LLD E+ Y + ++A+D G
Sbjct: 287 ILTTFQINPFSGE---------IFLRELLDYELVN-SYKINIQAMDGG 324
>gi|351698157|gb|EHB01076.1| Cadherin EGF LAG seven-pass G-type receptor 3 [Heterocephalus
glaber]
Length = 3767
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 41/116 (35%), Positives = 53/116 (45%), Gaps = 25/116 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
NAP F Y V E+ P T V+ + A D D N ++ Y+ + G DG G FTI+
Sbjct: 848 NAPQFVASHYTGLVSEDAPPFTSVLQISATDRDAHA-NGRVQYTFQNGEDGDGDFTIE-- 904
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIV-VLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
PT IV ++ LDRE P+ Y LT AVD+G PP T
Sbjct: 905 ---------PTS----------GIVRTVRRLDREAVPV-YELTAYAVDRGVPPLRT 940
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y + E+ +GT V+++ A D D NS ISY + GG+ F I +G
Sbjct: 643 NRPEFTMKEYHLRLNEDAAVGTSVVSVTAVDRDA---NSAISYQITGGNTRNRFAISTQG 699
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREI 94
+ +V + K++ Y +VL DR +
Sbjct: 700 GVG---LVTLALPLDYKQERYFKLVLTASDRAL 729
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS+ Y A V+E+ T+V+ + A D D N + Y++ G+ G+F ID+
Sbjct: 432 NAPQFSEKRYVAQVREDVHPHTVVLRVTATDRDKDA-NGLVHYNIISGNSHGHFAIDS-- 488
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I V+ LD E A Y L +RA D G PP
Sbjct: 489 ------------------LTGEIQVVAPLDFE-AEREYALRIRAQDAGRPP 520
Score = 39.3 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG 48
+ P+F +Q +V EN P+G VI ++A DAD G N+++ YS+ G
Sbjct: 538 HTPIFVSTPFQVSVLENAPLGHSVIHIQAVDAD-HGENARLEYSLTG 583
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF Y ++ E++P+G+ V+ + A+D D G N++I+Y + D L F ID
Sbjct: 747 PVFQSAHYSVSMNEDRPVGSTVVVISASD-DDVGENARITYLLE--DNLPQFRID 798
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAPVF ++ VKEN +G++V + A D D G N+ I Y + G+ F +D
Sbjct: 954 NAPVFPAEEFEVRVKENSIVGSVVAQITAVDPD-EGPNAHIMYQIVEGNIPELFQMD 1009
>gi|301781314|ref|XP_002926069.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3-like [Ailuropoda melanoleuca]
Length = 4091
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 41/116 (35%), Positives = 53/116 (45%), Gaps = 25/116 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
NAP F Y V E+ P T V+ + A D D N ++ Y+ + G DG G FTI+
Sbjct: 972 NAPQFVASHYTGLVSEDAPPFTSVLQISATDRDAHA-NGRVQYTFQNGEDGDGDFTIE-- 1028
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIV-VLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
PT IV ++ LDRE P+ Y LT AVD+G PP T
Sbjct: 1029 ---------PTS----------GIVRTVRRLDREAVPV-YELTAYAVDRGVPPLRT 1064
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y + E+ +GT V+++ A D D NS ISY + GG+ F I +G
Sbjct: 767 NRPEFTMKEYHLRLNEDAAVGTTVVSVTAVDRDA---NSAISYQITGGNTRNRFAISTQG 823
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREI 94
+ +V + K++ Y +VL DR +
Sbjct: 824 GVG---LVTLALPLDYKQERYFKLVLTASDRAL 853
Score = 39.7 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS+ Y A V+E+ T+V+ + A D D N + Y++ G+ G+F ID+
Sbjct: 556 NAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDA-NGLVHYNIISGNSRGHFAIDS-- 612
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I V+ LD E A Y L +RA D G PP
Sbjct: 613 ------------------LTGEIQVVAPLDFE-AEREYALRIRAQDAGRPP 644
Score = 39.3 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG 48
+ P+F +Q +V EN P+G VI ++A DAD G N+++ YS+ G
Sbjct: 662 HTPIFVSTPFQVSVLENAPLGHSVIHIQAVDAD-HGENARLEYSLTG 707
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 24/110 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF Y V E++P+G+ V+ + A+D D G N++I+Y + E L
Sbjct: 871 PVFQSAHYSVNVNEDRPVGSTVVVISASD-DDVGENARITYLL-------------EDNL 916
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
FRI D G I + LD E + Y L + A D G P +
Sbjct: 917 PQFRI---NADSGA------ITLQAPLDYE-DQVTYTLAITARDNGIPQK 956
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAPVF ++ VKEN +G++V + A D D G N+ I Y + G+ F +D
Sbjct: 1078 NAPVFPAEEFEVRVKENSIVGSVVAQITAVDPD-EGPNAHIMYQIVEGNIPELFQMD 1133
>gi|301753531|ref|XP_002912649.1| PREDICTED: protocadherin beta-10-like [Ailuropoda melanoleuca]
Length = 799
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 20/108 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS +Y+ EN P+G+L+ + A D D G+N+ ISYS+ +E
Sbjct: 238 NAPQFSQTIYETQAPENSPVGSLIAKVSAGDVD-SGVNADISYSLFDA---------SED 287
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
F+I P D IV++ LLD E+ Y + ++A+D G
Sbjct: 288 IRTTFQINPFSGD---------IVLIVLLDYELVK-SYKINVQAMDGG 325
>gi|444713195|gb|ELW54103.1| Protocadherin gamma-A7 [Tupaia chinensis]
Length = 1389
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
+APVFS YQAT+ EN P+GT ++T+ A D D G+N +++YS R
Sbjct: 803 HAPVFSQPQYQATIPENVPVGTRLLTVNAVDLD-EGINGEVTYSFR 847
Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
N PVF+ Y+ +V EN P G+ V+TL A D D G+N++++Y+
Sbjct: 237 NPPVFTQDTYRVSVSENLPPGSSVLTLIATDPD-EGVNAEVTYA 279
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP + +++ E+ P GT++ D D G N +++ ++
Sbjct: 908 NAPEVTITSVSSSIPEDTPPGTVIALFYLQDRDS-GKNGEVTCTI--------------- 951
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
P N +P K++ Y +V K LDRE L YN+TL+A D G+PP T
Sbjct: 952 PEN----LPFKLERSIDNY-YRLVTAKNLDREKLSL-YNITLKATDGGSPPLST 999
Score = 36.2 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP + ++E+ GT+V +K D D G+N +I ++G
Sbjct: 342 NAPEITLASESQHIQEDALPGTVVALIKIYDLDS-GVNGEILCQLKGK------------ 388
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P KI TK Y +V LDRE P YNLT+ A D+G+PP
Sbjct: 389 -------FPFKIIQDTKNT-YRLVTDGALDREQFP-DYNLTVTASDRGSPP 430
>gi|410919675|ref|XP_003973309.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like
[Takifugu rubripes]
Length = 2988
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F +QATV EN P+G +I ++A DAD G NS++ Y + F+I+N
Sbjct: 578 NAPIFVSTPFQATVLENVPLGYSIIHIQAVDAD-SGDNSRLEYRLTATTPNFPFSINNST 636
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
IVV LDRE YN + A D+G P
Sbjct: 637 GW--------------------IVVAAELDRESVDF-YNFGVEARDQGYP 665
Score = 38.5 bits (88), Expect = 0.88, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
NAP FS+ Y V E+ T ++ + A D D G N+ + +S+ G+ G F ID +
Sbjct: 472 NAPQFSEKRYVVQVPEDMAPNTEILQVTATDQD-RGSNAVVHFSIMSGNTRGQFYIDAQT 530
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G ++ + + +D T K+ Y L +RA D G PP
Sbjct: 531 GKMD----LVSHLDYETNKE------------------YTLRIRAQDGGRPP 560
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 20/116 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F +YQ +V EN+P GT V+ LKA D D G ++ Y + + +
Sbjct: 258 PQFQPPMYQVSVAENKPAGTPVVVLKAVDVD-EGEAGRLEYFIEA--------LFDSRSN 308
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
N F +DP + +++LDRE + + AVD G PR T AT
Sbjct: 309 NLF-----AVDPANGA----VSTVEVLDRETKDT-HVFRVTAVDHGV-PRRTAMAT 353
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F+ Y + E+ +GT V+T+ A D D +NS ++Y + G+ F+I ++
Sbjct: 683 NNPEFTQKAYYMRLNEDAAVGTSVVTVSAVDQD---INSVVTYQISSGNTRNRFSITSQ 738
>gi|348546069|ref|XP_003460501.1| PREDICTED: protocadherin alpha-8-like, partial [Oreochromis
niloticus]
Length = 569
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 25/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG---LGYFTID 58
N P F +Y+ ++KEN P GT V+T+ A DAD G N I Y + D L F ID
Sbjct: 235 NIPTFKKSLYKTSIKENAPSGTTVVTVSATDAD-EGANKDIVYLLNSKDQDRVLEIFEID 293
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
++ + I V +D E P + + ++A DKG PP
Sbjct: 294 SQTGM--------------------ITVKGTIDFETNP-AFEIRVQATDKGQPP 326
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 19/111 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F D V V EN P+GT++ T+ A DAD G N ++ YS+ DN G
Sbjct: 448 NAPLFGDTVNNIYVAENSPVGTVLKTVCATDAD-AGENGQVRYSLVS---------DNAG 497
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PL+ + ++ + +N LK+ + ++A D G PP
Sbjct: 498 PLSTMISINSETGGIVTLQPFNYEELKM---------FQFKVQATDSGVPP 539
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP + +TVKE+ GT + + D D G N ++ +
Sbjct: 343 NAPDITVTSLLSTVKEDAESGTAIALVSVLDEDG-GKNGEVKCEI--------------- 386
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
LN VP K++ K Y++V+ +LDRE+ YN+T++A D+G+PP
Sbjct: 387 -LNS---VPFKLETNYKNY-YSLVIGGVLDRELIS-HYNITIKATDEGSPP 431
>gi|357614378|gb|EHJ69045.1| fat protein [Danaus plexippus]
Length = 1382
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 20/101 (19%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
ATV EN G+LV + D D G+N S + G+ L +F ++N +
Sbjct: 332 ATVDENAKNGSLVAAITVTDLDA-GLNGITSIKIVAGNELNHFRLENSSSV--------- 381
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
Y + V +LDRE YNLT+ A DKGTPPR
Sbjct: 382 ---------YIVHVNGILDREEIS-KYNLTVVATDKGTPPR 412
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 15/105 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID--- 58
N+P+F+ Y V E +G ++ + ++DAD G+N + Y + GGD LG F +D
Sbjct: 854 NSPIFTRTPYAVEVSEGAVVGASIMRVYSSDADE-GLNGDVYYKLIGGDDLGKFVLDEAT 912
Query: 59 ---------NEGPLNHFRIVPTKIDPG--TKKKEYNIVVLKLLDR 92
+ ++H+ + D G T+ I+ + +LD
Sbjct: 913 GQLFINKPLDRESIDHYVLTVIAHDSGQTTRLSSTTIITVDVLDE 957
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F Y +++E+ G+ V+ +KA D D G NSK+ Y + G G GYF ++
Sbjct: 641 NDPIFYPQRYFESIREDLAPGSRVLQVKAFDLD-EGDNSKVVYKLESG-GEGYFDVE--- 695
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
P N + V + +D ++K+Y Y+LT+ A D G P R +
Sbjct: 696 PENGYIYVKSPLD--REEKDY----------------YSLTIVASDHGKPSRSS 731
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF +V E +P+ +I A DAD G+N+++ YS+ G+ F ID+
Sbjct: 960 NAPVFEQSQMNVSVLETEPVNKKIIQFHANDAD-LGINNELQYSITSGNRKETFFIDS 1016
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 46/115 (40%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF Y + E PIGT V + A D D G+N++I Y G+ +F ID+
Sbjct: 428 HEPVFEKSEYSTVLSELAPIGTYVAGITATDED-TGVNAEIFYDFYDGNQQQWFFIDHYT 486
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
L + +LDREI L + A D G P+ Y
Sbjct: 487 GL--------------------VTTRSVLDREIQGT-VELNVSARDGGPNPKWAY 520
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 33/117 (28%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F++ ++E P+ T ++T+ A D D G N K+ YS+
Sbjct: 1065 NAPIFTNTAIVRQIREGIPMHTPIVTVTAEDPD-SGWNGKVYYSI--------------- 1108
Query: 62 PLNHFRIVPTKIDPGTKKKEYNI-----VVLKLL--DREIAPLGYNLTLRAVDKGTP 111
T DP K+ + I V+ LL DREI + +T+ A DK P
Sbjct: 1109 ---------THQDPSNGKRHFAINNVTGVIYTLLPIDREIIDT-FRITVVACDKAEP 1155
>gi|148747499|ref|NP_291065.3| protocadherin gamma-A4 precursor [Mus musculus]
gi|13876334|gb|AAK26087.1| protocadherin gamma A4 [Mus musculus]
Length = 930
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
NAPVF+ Y +VKEN P+GT ++T+KA D D G+N +++YS R
Sbjct: 237 NAPVFTQPEYHISVKENLPVGTRLLTIKATDPD-EGVNGEVTYSFR 281
>gi|317420153|emb|CBN82189.1| Cadherin-20 [Dicentrarchus labrax]
Length = 797
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F +YQ +V E+ P+G++V + A D D G+N+++ YS+ GDG F I +
Sbjct: 261 NPPMFDQRLYQMSVPESAPVGSVVGRIWAKDRD-IGVNAEMKYSIIDGDGRDTFDISTD- 318
Query: 62 PLNHFRIVPTK 72
P N F I+ K
Sbjct: 319 PTNLFGIISVK 329
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 7/87 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P F D YQA+V E IGT VI L A DAD P G ++++ YS+ +G YF++D
Sbjct: 152 NEPRFLDGPYQASVPEMSKIGTSVIQLTATDADDPTYGNSARVVYSIL--EGQPYFSVDA 209
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVV 86
+ + R+ +D T++ Y +V+
Sbjct: 210 KTGV--VRVSLADMDRETREN-YTVVI 233
>gi|119582413|gb|EAW62009.1| hCG1982192, isoform CRA_x [Homo sapiens]
Length = 824
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 25/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR---GGDGLGYFTID 58
NAP F +Y+ + EN P GTLV+T+ A D D G+N I+YS D L F +D
Sbjct: 238 NAPAFERTIYKVRLLENAPNGTLVVTVNATDLD-EGVNKDIAYSFNTDMSADILSKFHLD 296
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+N V ID K Y + + A DKG PP
Sbjct: 297 ---PVNGQISVKGNIDFEESKS------------------YEIQVEATDKGNPP 329
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP FS Y VKEN P G + T+ A DAD N+ +SYS+
Sbjct: 451 NAPAFSQSEYTVFVKENNPPGCHIFTVSARDADAQ-ENALVSYSL 494
Score = 35.4 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF V + E++ G+ A+DAD G NS ++YS+ D YFT+D +
Sbjct: 129 NAPVFPMAVKNLFISESRQPGSRFSLEGASDAD-IGTNSLLTYSL---DSTEYFTLDVK- 183
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
N I K +V+ K L+RE P Y L + A+D G P
Sbjct: 184 -RNDEEI-----------KSLGLVLKKNLNREDTPKHY-LLITAIDGGKP 220
>gi|29290075|gb|AAO72332.1| flamingo-like protein celsr2 [Rattus norvegicus]
Length = 335
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 57/113 (50%), Gaps = 28/113 (24%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGY---FTID 58
NAP+F +QATV E+ P+G LV+ ++A DAD G N+++ YS+ G+G+ FTI+
Sbjct: 28 NAPIFVSTPFQATVLESVPLGYLVLHVQAIDAD-AGENARLEYSLA---GVGHDFPFTIN 83
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
N GT I V LDRE Y+ + A D GTP
Sbjct: 84 N----------------GTGW----ISVAAELDREEVDF-YSFGVEARDHGTP 115
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF Y V E++P GT V+ + A D D G N++I+Y + D + F ID
Sbjct: 237 PVFQSSHYTVNVNEDRPAGTTVVLISATDED-TGENARITYFME--DSIPQFRID 288
>gi|157822707|ref|NP_001100750.1| protocadherin-20 [Rattus norvegicus]
gi|149050075|gb|EDM02399.1| protocadherin 20 (predicted) [Rattus norvegicus]
Length = 952
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + + T++EN + L A DAD G ++SY + G D YF++D+
Sbjct: 532 NAPVFLQPLIELTIEENNAPNAFLTKLYATDAD-SGEMGRVSYFL-GPDAPSYFSLDS-- 587
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ V T++D K+K Y T+RAVD G PPRE+
Sbjct: 588 -VTGILTVSTQLDREEKEK------------------YRYTVRAVDCGKPPRES 622
>gi|348546065|ref|XP_003460499.1| PREDICTED: protocadherin alpha-8-like, partial [Oreochromis
niloticus]
Length = 604
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 25/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG---LGYFTID 58
N P F +Y+ ++KEN P GT V+T+ A DAD G N I Y + D L F ID
Sbjct: 235 NIPTFKKSLYKTSIKENAPSGTTVVTVSATDAD-EGANKDIVYLLNSKDQDRVLEIFEID 293
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
++ + I V +D E P + + ++A DKG PP
Sbjct: 294 SQTGM--------------------ITVKGTIDFETNP-AFEIRVQATDKGQPP 326
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 19/111 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F D V V EN P+GT++ T+ A DAD G N ++ YS+ DN G
Sbjct: 448 NAPLFGDTVNNIYVAENSPVGTVLKTVCATDAD-AGENGQVRYSLVS---------DNAG 497
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PL+ + ++ + +N LK+ + ++A D G PP
Sbjct: 498 PLSTMISINSETGGIVTLQPFNYEELKM---------FQFKVQATDSGVPP 539
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP + +TVKE+ GT + + D D G N ++ +
Sbjct: 343 NAPDITVTSLLSTVKEDAESGTAIALVSVLDEDG-GKNGEVKCEI--------------- 386
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
LN VP K++ K Y++V+ +LDRE+ YN+T++A D+G+PP
Sbjct: 387 -LNS---VPFKLETNYKNY-YSLVIGGVLDRELIS-HYNITIKATDEGSPP 431
>gi|307197256|gb|EFN78561.1| Protein dachsous [Harpegnathos saltator]
Length = 537
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P F+ Y A+V EN +GT V+T+ A DAD G NS+I YS+ R D F ID
Sbjct: 192 NPPTFNQTRYVASVPENATVGTAVLTVNATDAD-AGENSRIEYSINRRQSDREEMFRIDA 250
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLK 88
E L + V +D +K++ ++V +
Sbjct: 251 ETGLVYVNKV---LDFESKERHELVIVAR 276
>gi|61162140|dbj|BAD91058.1| At-cadherin [Achaearanea tepidariorum]
Length = 2971
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNE 60
N P F + VKE+ IGT + T +A DAD G S++SY++ R D F ID
Sbjct: 1739 NKPEFEKPNIEVIVKEDADIGTSLATFRATDADQGG-KSRVSYTIDRSSDKKRQFRIDQN 1797
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
G + + + LDRE P + + + A+D GTPPR
Sbjct: 1798 GV---------------------VRIQRTLDREETPR-HQVKILAIDDGTPPR 1828
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 52/112 (46%), Gaps = 28/112 (25%)
Query: 2 NAPVFSDFVYQA-TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP F YQA V E+ +GT ++ + A+D D N++I YS+ D FTIDN+
Sbjct: 636 NAPRFELPDYQAHNVDEDVAVGTSILQVSASDMDQ-NKNAEIEYSLDKED----FTIDNK 690
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G I K LD +I Y LT+RA D+G PP
Sbjct: 691 GV---------------------IYSNKRLDADINNT-YVLTVRATDRGDPP 720
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGG----DGLGYF 55
N+P F +Y V EN G V+T+ A D D P GMN+++ YS+ +G F
Sbjct: 1509 NSPFFPYAIYTGNVTENGTAGMTVMTMTATDYDDPNEGMNARLKYSIEQNQVNENGELIF 1568
Query: 56 TIDNE 60
TID E
Sbjct: 1569 TIDEE 1573
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 10/71 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N P F +Y+A V E++ I VIT+ A D D +S+I Y + G+ G F + NE
Sbjct: 1293 NPPYFDQALYEAEVNEDEDIQHTVITVTAKDKDE---SSRIRYEITQGNIGGAFAVKNET 1349
Query: 61 ------GPLNH 65
GPL++
Sbjct: 1350 GAIYVAGPLDY 1360
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 12 QATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDNE 60
Q TV E P GT V ++A+D D N+K+ Y++ D G +FTID E
Sbjct: 1187 QETVLEGMPPGTKVTQVQASDKDGTYPNNKVYYAIESKDQGDKFFTIDRE 1236
>gi|57529050|ref|NP_001009591.1| protocadherin 2 alpha b 12 precursor [Danio rerio]
gi|53748799|dbj|BAD52316.1| cadherin-related neuronal receptor variable 12 [Danio rerio]
gi|53748824|dbj|BAD52329.1| cadherin-related neuronal receptor variable 12 [Danio rerio]
Length = 940
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 55/115 (47%), Gaps = 18/115 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF +Y+ + EN P+GTLVI L A D D G+NS+I YS+ D ++
Sbjct: 234 NAPVFGKALYKVRIVENAPLGTLVINLNATDLD-EGLNSEIIYSLVQQDS-------DDK 285
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ F KID T + V +D E Y + +A DKG PR +
Sbjct: 286 ASSVF-----KIDSATGV----VSVQGRVDFE-ERNAYEIHAQAKDKGASPRSAH 330
>gi|402872784|ref|XP_003900282.1| PREDICTED: protocadherin alpha-3 [Papio anubis]
Length = 813
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 39/114 (34%), Positives = 49/114 (42%), Gaps = 25/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR---GGDGLGYFTID 58
NAPVF +Y+ + EN P GTLV+T+ A D D G+N I YS D L F +D
Sbjct: 240 NAPVFERTIYKVRLFENAPNGTLVVTVNATDLD-EGVNKDIVYSFNTDMSTDILSKFHLD 298
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+N V ID K Y + + A DKG PP
Sbjct: 299 ---PVNGQISVKGNIDFEESKS------------------YEIQVEATDKGNPP 331
Score = 35.4 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F+ Y V+EN P G + T+ A DAD N+ +SYS+
Sbjct: 453 NAPAFAQSEYTVFVRENNPPGCHIFTVSAWDADAQ-ENALVSYSL 496
>gi|326673383|ref|XP_002664329.2| PREDICTED: protocadherin gamma-A11-like [Danio rerio]
Length = 820
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
NAPVFS VY+ ++ EN P+ T+V+T+ A DAD G N +++Y+
Sbjct: 250 NAPVFSQAVYKVSLPENSPVDTVVVTVSATDAD-EGQNGEVTYA 292
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P+F + + + ++E+ G+ + +A DAD G+NS SY+++ +NE
Sbjct: 141 NSPLFKEGIIKFEIQESAVKGSRYLLEEAHDADI-GLNSVQSYTLQ----------NNEN 189
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
L + P G K E +V+ K LDRE L L AVD GTPPR
Sbjct: 190 FLLNVLTRPN----GRKYGE--LVLNKELDRE-QQKEVTLILTAVDGGTPPR 234
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 38 MNSKISYSVRGGDGLGYFTIDNEGPLNHFRI-------VPTKIDPGTKKKEYNIVVLKLL 90
+NS + S G +G + + N+ ++ VP K+ P K Y++V L
Sbjct: 364 LNSPVPESALPGTEVGIINVQDRDSENNGQVRCSIQQNVPFKLVPSIKNY-YSLVTTGEL 422
Query: 91 DREIAPLGYNLTLRAVDKGTPPRETYK 117
DRE+ YN+T+ A D+G+PP + K
Sbjct: 423 DRELLS-EYNITITATDEGSPPLSSTK 448
>gi|47227865|emb|CAG09028.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1753
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 25/117 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N PVF +V E+QP+G + + +KA DAD G N +++Y ++ G+ G F+++ N
Sbjct: 777 NPPVFRSPA-SVSVMEDQPVGFVALYVKATDAD-EGENGRVTYRIQSGNTGGKFSLNPNT 834
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
G L+ +LK LDRE + +NLT+ A D G P + + +
Sbjct: 835 GSLS---------------------ILKPLDREEQDI-FNLTITAEDHGMPQQSSAQ 869
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 54/125 (43%), Gaps = 40/125 (32%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F + Y+A V ENQP GT V+T+ A+D D G N +++YS
Sbjct: 883 PWFEETQYEAQVSENQPSGTSVLTVSASDLD-LGPNGQVTYS------------------ 923
Query: 64 NHFRIVPTKIDPGTKKKEYN-------IVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
G ++++N I K LDRE+ Y +T+ A D G PP
Sbjct: 924 ------------GISEEDFNINPVTGVITTTKALDRELREY-YTVTVYAKDGGLPPNYA- 969
Query: 117 KATPR 121
KAT R
Sbjct: 970 KATVR 974
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP F+ +YQ TV E+ P G+ V+T+ A D D G N KI Y V G F ID
Sbjct: 1604 NAPTFTQDMYQVTVAEHLPAGSAVVTVTATDRD-SGDNGKIIYRVMSSTK-GIFYID 1658
Score = 38.5 bits (88), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 51/113 (45%), Gaps = 26/113 (23%)
Query: 2 NAPVFS-DFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N+P F+ D V+ A VKEN P GT + AAD D G N ++SY +
Sbjct: 351 NSPRFTQDRVFMA-VKENLPAGTGFGHVSAADRD-AGPNGRLSYRLL------------- 395
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P HF+I P + TK +LDRE Y L + D G+PPR
Sbjct: 396 HPDRHFQINPHTGEMSTK---------TVLDRE-QQSSYQLVVLVQDGGSPPR 438
>gi|410928684|ref|XP_003977730.1| PREDICTED: neural-cadherin-like [Takifugu rubripes]
Length = 2917
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP F+ +Y+ +V+E++ +G ++IT+ A D D G N+K+ Y + G+ +G F ++ E
Sbjct: 1219 NAPAFAQPLYEVSVEEDKEVGFVLITVTANDED-DGANAKLRYQIAAGNNMGTFDVEPE 1276
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 2 NAPVFSD---FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGY-FTI 57
N P+F + + A V+ENQP GT V+ ++A DAD G+N ++ Y + DG+ F I
Sbjct: 790 NKPIFQECQNYSQNAVVQENQPPGTQVLRVQAHDAD-MGVNGQVKYGIMHRDGISSGFDI 848
Query: 58 D 58
D
Sbjct: 849 D 849
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
APVFS VY+ + E+ TLV + A D D G +SY+V GG+ F +D +
Sbjct: 684 APVFSQSVYKTFLSEDAGPDTLVAIVHANDPDGDG----VSYAVTGGNEDSNFLLDKQKG 739
Query: 63 LNHFRIVP 70
+ R P
Sbjct: 740 IIKLRKSP 747
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 25/112 (22%)
Query: 2 NAPVF-SDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDN 59
+AP+F F A + E+ +GT+V + A+D D G+N + +YS+ R D F +D
Sbjct: 1639 HAPIFFPQFYESAALSEDVAVGTIVTQVTASDLD-SGLNGRFTYSISRESDPFSQFLVDP 1697
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
G +VV LDRE + L L A D G+P
Sbjct: 1698 SGW---------------------VVVADSLDREKIS-QHRLILLATDAGSP 1727
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 27/111 (24%)
Query: 4 PVFSDFVY-QATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
P F +Y + V EN GT ++ + A+D D G+N+++SY V+ D F I +EG
Sbjct: 583 PEFLHAIYSRDGVPENVLAGTSLLQVVASDCDS-GLNAQLSYFVQSAD----FDITSEGV 637
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+N P K LD E Y + AVD G PPR
Sbjct: 638 VN----------PA-----------KRLDYERPNHAYEFVVVAVDAGKPPR 667
>gi|332216636|ref|XP_003257456.1| PREDICTED: protocadherin-20 [Nomascus leucogenys]
Length = 952
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F + + T++EN + L A DAD G ++SY + G D YF++D+
Sbjct: 532 NAPIFLQPLIELTIEENNSPNAFLTKLYATDAD-SGERGQVSYFL-GPDAPSYFSLDS-- 587
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ V T++D K+K Y T+RAVD G PPRE+
Sbjct: 588 -VTGILTVSTQLDREEKEK------------------YRYTVRAVDCGKPPRES 622
>gi|301756110|ref|XP_002913894.1| PREDICTED: protocadherin-23-like [Ailuropoda melanoleuca]
Length = 3357
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 22/109 (20%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
APVF +Y+A+VKENQ G V ++A D D G+NSK + + G G+F
Sbjct: 1708 APVFQQKLYEASVKENQNPGQFVTRVEAMDRD-SGINSKFQFEIMPGASSGFF------- 1759
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
KI+P T +V LDRE+ + ++L + D G P
Sbjct: 1760 ---------KINPDTGV----VVTTTALDREVREV-FSLRVLVRDGGVP 1794
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F VY AT+ E+ P+G + +KA+DAD G+ + YS+ G F +
Sbjct: 646 NEPIFRRQVYNATLAEHAPVGHCFLQVKASDAD-AGLYGFVEYSLYDG-----FQSYDAS 699
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
P +IDP + I V + +DRE P Y+L ++A D G
Sbjct: 700 P-------AFQIDPHDGR----ICVSQDIDRERDPATYDLLVKAKDGG 736
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 45/110 (40%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F VY +V E Q +I + AAD D GMN YS+ G+ F ID
Sbjct: 2225 NLPCFEQSVYHVSVSEGQFHNAPIIQVFAADPD-SGMNGLPEYSILSGNQGEAFRIDTLS 2283
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ I LLD E+ Y+LT++A DKG P
Sbjct: 2284 GV--------------------ITANALLDYELTS-SYSLTVQATDKGMP 2312
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
+ P F +YQA+V+E+ +GT+V+ L A D D G+N + Y + + G FTID
Sbjct: 1916 HGPSFPTLLYQASVREDAQVGTVVLVLSAMDRD-EGLNGQTEYFLV-DETSGAFTID 1970
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 13/102 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N P F Y A VKE+ P+G+ + + A D D G +++I Y + G+ G+F ++
Sbjct: 2648 NPPKFHSLKYHAHVKESTPLGSHITVVSATDRD-VGSHAEIIYHIISGNEKGHFHLEETT 2706
Query: 61 ------GPLNH-----FRIVPTKIDPGTKKKEYNIVVLKLLD 91
PL++ F + D K + +V + +LD
Sbjct: 2707 GVLYLIKPLDYEETTKFTLTVQASDEEKKHFSFTVVFINVLD 2748
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYF----- 55
++P F + +V+EN PIGTLV A D D +NS+I Y + G+ F
Sbjct: 1493 HSPFFQEEFVVISVEENVPIGTLVHIFNAKDGDGSFLNSRIQYFIESHHPGMSPFLIHPS 1552
Query: 56 --TIDNEGPLNHFRIVPTKI 73
T+ PL+ R VPT I
Sbjct: 1553 FGTLVTASPLDRER-VPTVI 1571
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLG------YF 55
N PVF Y+A V+E+ G V ++A D D G N + YS+R LG YF
Sbjct: 283 NPPVFEQSEYRAAVREDARPGAEVCRVRATDRD-LGPNGHVRYSLRARQALGPLGDAAYF 341
Query: 56 TID 58
T++
Sbjct: 342 TVE 344
Score = 36.2 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 13/111 (11%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP F+ Y +++E+ IG ++T D D N+ YS+ G+
Sbjct: 2533 APEFAVEYYNLSLREDAQIGGTLVTFSTIDHDWTRENTHADYSIISGNS----------- 2581
Query: 63 LNHFRIVPTKIDPGTKKKEYN-IVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N+F + + I K+ +V+L LDRE A + L + A D G PP
Sbjct: 2582 QNNFHVETSFIHSEYPYKQVGYLVLLHSLDREAAA-SHKLVILASDHGFPP 2631
Score = 35.8 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 28/116 (24%)
Query: 2 NAPVFSDFV----YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N+P F + V E QP+ LV T+ A D D G N+++ YSV D +F I
Sbjct: 1277 NSPYFPQCLPGEELHVKVLEGQPVNMLVTTVFAKDFDE-GNNAEVVYSVSSEDSSDHFKI 1335
Query: 58 D-NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
D N G + I+ P Y +T+ A D+G PP
Sbjct: 1336 DANSGEIRTTTILSYDRRPS----------------------YRMTVIASDQGVPP 1369
Score = 35.4 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 6 FSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
FS +Y+ TV EN GT ++T+ A DP + I YS+ G+ G F++
Sbjct: 2126 FSHHLYKGTVTENCDAGTSIVTVAAVAPDP--IQDSIKYSIFSGNEDGVFSL 2175
>gi|348514383|ref|XP_003444720.1| PREDICTED: protocadherin Fat 3-like [Oreochromis niloticus]
Length = 1598
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAPVF+ Y ATV EN P GT+V ++ A+DAD G N +I YS+
Sbjct: 1221 NAPVFTQSTYTATVFENAPEGTVVTSVSASDAD-HGSNGRIKYSI 1264
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F+ +Y+A ++EN P GT V T+ A+D D G N ++SY +
Sbjct: 733 NAPTFAKPLYRAKLQENSPKGTSVTTVSASDKD-IGSNGELSYLI 776
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAPVF+ VY+ T+ EN G ++ T+ A DAD G K+ YS+
Sbjct: 233 NAPVFTQEVYKVTIMENAAKGAILCTVSATDAD-EGSYGKVIYSI 276
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVF Y+A + EN G + T+KA DAD N+++SY
Sbjct: 1431 NAPVFERSSYEAYIVENNTPGLSIFTVKATDAD-WNQNARVSY 1472
>gi|326673299|ref|XP_003199827.1| PREDICTED: protocadherin alpha-3-like [Danio rerio]
Length = 802
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 41/110 (37%), Positives = 55/110 (50%), Gaps = 20/110 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y AT++EN IGT+V+ + A D D GMNS I YS FT +
Sbjct: 238 NRPVFSRDTYSATLQENSLIGTVVVRVNATDMD-EGMNSNIEYS---------FTTLHSK 287
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ F ++DP T + I V +D E + Y L ++A DKG P
Sbjct: 288 EHDVF-----ELDPVTGE----IRVKGAVDFEDTEV-YKLDIQASDKGHP 327
>gi|119514211|gb|ABL75874.1| protocadherin 2A36 [Takifugu rubripes]
Length = 944
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 19/115 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF +Y+AT+ EN P G VIT+ A D D G+N ++ YS + DN+
Sbjct: 236 NIPVFDKSLYKATIAENTPYGASVITVHARDLD-EGLNGEVIYS--------FINHDNDN 286
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++ F I P + I V LD E + + ++A DKG PR ++
Sbjct: 287 DIDKFDINPLTGE---------ITVKGELDHEKSS-AVEIRVQAKDKGPFPRASH 331
Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 26/100 (26%)
Query: 15 VKENQPIGTLV--ITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
VKE+ P T+V IT++ DAD G VR D VP K
Sbjct: 357 VKEDAPQETMVGLITVRDNDADRNG-----RVQVRLVD-----------------TVPFK 394
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I T K Y++VV LDRE+A YN+T+ A D+G PP
Sbjct: 395 I-KNTYKNHYSLVVDGSLDREVAS-EYNITIAATDEGLPP 432
>gi|54013406|dbj|BAD60792.1| protocadherin1-alpha-av3-vCP [Danio rerio]
Length = 938
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 53/114 (46%), Gaps = 19/114 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS VY +TV EN +GTLV+ + A+D+D G N ++SYS G + F I
Sbjct: 239 NRPMFSHDVYSSTVHENVQLGTLVLKVMASDSDY-GPNGEVSYSFGGDNSDNIFHI---- 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ RI G E N V Y L ++AVD G PP T
Sbjct: 294 -FSLDRITGEIRVTGEVDFEKNNV-------------YKLDIQAVDSGQPPLNT 333
>gi|57528983|ref|NP_001009587.1| protocadherin 2 alpha a 3 precursor [Danio rerio]
gi|54013408|dbj|BAD60793.1| protocadherin1-alpha-av3 [Danio rerio]
Length = 934
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 53/114 (46%), Gaps = 19/114 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS VY +TV EN +GTLV+ + A+D+D G N ++SYS G + F I
Sbjct: 239 NRPMFSHDVYSSTVHENVQLGTLVLKVMASDSDY-GPNGEVSYSFGGDNSDNIFHI---- 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ RI G E N V Y L ++AVD G PP T
Sbjct: 294 -FSLDRITGEIRVTGEVDFEKNNV-------------YKLDIQAVDSGQPPLNT 333
>gi|410932303|ref|XP_003979533.1| PREDICTED: protocadherin gamma-A4-like, partial [Takifugu rubripes]
Length = 810
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 25/45 (55%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAPV S VY+A +KEN GT+V T+KA DAD G N ++SYS+
Sbjct: 243 NAPVCSQPVYKADIKENSAEGTVVTTVKANDAD-TGANGEVSYSI 286
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 22/116 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P + ++ E+ P GT + + DAD S R +G+ +I+++
Sbjct: 348 NIPTIQMMSFTHSISEDSPPGTTIAVVNVDDAD----------SER--NGVVKCSINSD- 394
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VP K++ + Y+IV LDRE P YN+T+ D+G+PP K
Sbjct: 395 -------VPFKME-SSLTGYYSIVTETFLDRESVP-EYNITITVSDQGSPPLSNTK 441
>gi|410913753|ref|XP_003970353.1| PREDICTED: protocadherin gamma-A8-like [Takifugu rubripes]
Length = 815
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 38/67 (56%), Gaps = 10/67 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY+ATV EN P T V T+ A+DAD G NS ++Y YF+ + G
Sbjct: 246 NAPVFNQSVYKATVLENSPADTYVTTVNASDAD-SGSNSIVTY---------YFSDTSSG 295
Query: 62 PLNHFRI 68
N F I
Sbjct: 296 VRNIFTI 302
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVF VY A + EN G V+TL+A D D N++ISY
Sbjct: 456 NAPVFPQAVYSAPIVENNSPGVSVLTLRAKDPD-ENQNARISY 497
>gi|405973235|gb|EKC37959.1| Protocadherin Fat 1 [Crassostrea gigas]
Length = 3515
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 46/106 (43%), Gaps = 25/106 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS YQ V E+ GT+ + LK DAD S + Y + GD +G F I G
Sbjct: 1779 NPPVFSQAQYQTAVNEDALSGTVFLALKTTDADAK---SNVDYFIADGDPMGRFKIHKNG 1835
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+I V K LDRE+ P Y LT+ A D
Sbjct: 1836 ---------------------DIYVTKPLDREMVP-NYVLTVAASD 1859
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 16/105 (15%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+F + Y VKE+ P GT ++++KA + N K+ YS+ GD FT+D
Sbjct: 1037 PIFDKYYYSVDVKESSPAGTAIMSIKAISPN----NQKLIYSITDGDPYKEFTVD----- 1087
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKL-LDREIAPLGYNLTLRAVD 107
F IV D K I+ L LD E + Y+LT+RA D
Sbjct: 1088 --FNIVVIVCD---NKSHRGIISLTTPLDYESTKV-YSLTVRATD 1126
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 49/109 (44%), Gaps = 22/109 (20%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+++PVFS +YQA + EN G + T+KA D D G ISYSV + +F ID
Sbjct: 1355 LHSPVFSKVLYQANLMENVGRGIPITTVKAQDGD-RGYFGMISYSVLSHEMRQFFNID-- 1411
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
D G I +L DRE Y++T+ A D G
Sbjct: 1412 ------------ADTG------EIFAERLFDRE-EQSSYSVTVAATDNG 1441
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS Y+ ++ E+ +G LV + A D D G N+ +++S+ GD L F
Sbjct: 2190 NKPFFSQASYRTSLLEDTAVGQLVYQVHANDTD-EGQNALLTFSIIEGDSLHSF------ 2242
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+I P T + I + LDRE+ Y L + D G PP
Sbjct: 2243 ----------EIHPVTGE----ISIRTPLDREMID-KYKLVVEIRDSGLPP 2278
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 27/118 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG---LGYFTID 58
N P F+ Y+A + E+ IG+ V+T+ A D D +NS++ Y + G + F ID
Sbjct: 307 NTPEFTQSEYKADISESAAIGSSVLTISAVDID---LNSRVFYKISGAANAITMDLFEID 363
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+E + I V LDRE+ + +T+ D+G P +
Sbjct: 364 SETGV--------------------ISVKGALDREVMT-QHKMTIMVRDQGFPSNRNF 400
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 22/108 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+FS+ Y ATV+E+Q +G ++ D D ++ + G NEG
Sbjct: 2297 PLFSESSYNATVQEDQYVGYKILHYIVTDNDLDPNGPPFTFDIVSG---------NEG-- 2345
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
FRI PT I K +R+I L Y LT+R D GTP
Sbjct: 2346 QEFRIEPTGILSTAGK----------FNRDILDL-YTLTVRVFDNGTP 2382
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F+ + Y + E P+GT V+ + A DAD G+N++I Y + +DN
Sbjct: 1148 SPSFTHYKYTKIISEAAPVGTSVLKVTATDAD-SGINAEIQYDLS--------PLDNSRS 1198
Query: 63 LNHFRIVP 70
+N F+I P
Sbjct: 1199 INIFQINP 1206
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 22/108 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F V +A+V E IGT V+ L A D D G N++I YSV G+ F +D+ +
Sbjct: 415 PQFVSDVTEASVFETSAIGTSVVQLMAIDQD-KGSNAEIFYSVVSGNIDMAFALDSTLGI 473
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I V K L++ Y++ ++A DKGTP
Sbjct: 474 --------------------ISVAKNLNKR-ERSDYSIVVKAADKGTP 500
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 46/107 (42%), Gaps = 27/107 (25%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ + EN IG ++ +A DAD K+ YS+ GD
Sbjct: 208 NPPQFPVAFYQVQLMENCKIGEVLDVYQAEDAD----GDKLWYSLADGD----------- 252
Query: 62 PLNHFRIVPTKIDPGTKKKEY-NIVVLKLLDREIAPLGYNLTLRAVD 107
P N F I P EY +I+ K LDRE YNLT+ A D
Sbjct: 253 PENQFNINP----------EYGSILTSKRLDREKRD-HYNLTVMATD 288
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F + Y V + G++V + A D D +N ++Y++ DG +
Sbjct: 932 NAPLFVNQPYDTVVSTDTKQGSIVTQVTAIDRD-ADLNGNVTYTLEKQDGDKF------- 983
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
++D GT ++ L D+++ L Y+L ++A DKG P + +
Sbjct: 984 ----------EVDAGTGHVR---LITALSDQDVDQL-YSLQIQATDKGHPSQSS 1023
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P F Y A V EN +GT V+ + A D G+N+K++YS+ G+ F ID
Sbjct: 2085 NPPEFVLSQYAAAVPENATVGTEVVKVLATSRD-IGLNAKMAYSITAGNKNMKFVID 2140
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+P+FS +QA + VIT+ A D D G N+KI Y+++ G+ G F ID
Sbjct: 730 NSPMFSHPEFQADILLPTAFDVEVITMIATDTDLGG-NAKIVYTIKDGNKDGKFKID 785
Score = 35.0 bits (79), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP-GMNSKISYSVRGGDGLGYFTIDNE 60
NAPV ++Q + E+ T++ +KA D D N KI Y ++G + FTI+ E
Sbjct: 1878 NAPVCDQPIHQHVLSEDIGTTTIITRVKATDVDSMYTSNEKIHYIIKGEENNKLFTINRE 1937
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLD 91
I+ K++ + + ++ VV+ +D
Sbjct: 1938 KG-----ILTPKVELDRETQSHHHVVVSAVD 1963
>gi|326435630|gb|EGD81200.1| tyrosine phosphatase [Salpingoeca sp. ATCC 50818]
Length = 8158
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 47/110 (42%), Gaps = 21/110 (19%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
APVF+ V V EN P G + A DAD +++SYS+ GG+ G F ID
Sbjct: 2613 APVFNADVGAQVVAENLPAGKVAAAPFATDADITAGFNRVSYSIVGGNAAGLFAIDAATG 2672
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ + LDRE YNLT++A D G PP
Sbjct: 2673 V--------------------VRTTGPLDRE-TDAAYNLTVQAADNGEPP 2701
Score = 43.1 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 39/110 (35%), Positives = 52/110 (47%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMN--SKISYSVRGGDGLGYFTIDN 59
NAPVF Y+AT+ EN G+ V+T +A+D D G N + I YS+R G G F ID+
Sbjct: 4061 NAPVFERERYEATIIENFNFGSTVLTARASDRD-LGANGTAGIVYSIRDGAGSSNFAIDS 4119
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ P T LDRE+ P+ LT+ A D G
Sbjct: 4120 ---------ATGDVRPTTA-----------LDREVLPV-ITLTIVAEDGG 4148
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP F Y ATV EN G +ITL A DAD P +++++S+ G+ +F +D
Sbjct: 5649 NAPAFVQGGYSATVAENTA-GVDLITLAATDADRPATPTQLTFSLAQGEWSQHFVVD 5704
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 51/113 (45%), Gaps = 21/113 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY---SVRGGDGLGYFTID 58
NAPVF V EN +GTLV T + DAD G N+ ++Y +V G D T D
Sbjct: 3625 NAPVFVGLDSAYAVVENSAVGTLVFTAQVTDAD-EGTNADVTYALVAVSGADS----TAD 3679
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
G ID + + + V +DRE L + L +RA D G+P
Sbjct: 3680 TSGVF--------AIDSASGE----VRVRGAVDREAQAL-FTLVVRATDGGSP 3719
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 14/108 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + Y A+V E+ +G V+ ++A DAD N++I+Y++ LG T ++ G
Sbjct: 5178 NAPVFDEEAYTASVLESAALGAQVVRVRATDADLAD-NARITYTL-----LGAGTTNSTG 5231
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ +ID + I V + LDRE Y LT+ AVD G
Sbjct: 5232 SA---VVGAFEIDASSGV----ISVARPLDRETQA-AYELTVVAVDGG 5271
Score = 38.9 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 25/124 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+APVF VY V+E+ T V+ + A+D D G+N++++Y++ +G G F ID
Sbjct: 4739 HAPVFEKSVYTQDVREDIAADTPVVVVAASD-DDAGLNAQLTYTLDEDEG-GLFVIDGSS 4796
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ + LDRE Y L +RA D G+ R AT R
Sbjct: 4797 G--------------------EVFASRPLDRETRE-SYVLVVRATDNGSEQR--LSATAR 4833
Query: 122 NGLT 125
LT
Sbjct: 4834 VELT 4837
Score = 38.5 bits (88), Expect = 0.96, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 24/115 (20%)
Query: 2 NAPVFSDF-VYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAPVF++ Y +V EN+ +G +V ++ DAD G+N +S+ + GG
Sbjct: 6395 NAPVFTEGGSYAMSVAENEGVGAVVGRVQVTDAD-SGVNELVSFMLVGGRA--------- 6444
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ F + P G + L+ LDRE+ Y LT+ A+D+G+P T
Sbjct: 6445 ---DLFSVNPVS---GV------VTTLQPLDREVQA-EYALTVLALDQGSPQLST 6486
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 37/106 (34%), Positives = 46/106 (43%), Gaps = 24/106 (22%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF Y ATV E +GT V+ + A+DAD N I Y++ G GL F ID L
Sbjct: 6616 PVFLADTYVATVSEAASVGTPVVRVSASDAD--ASNVAIRYALDDG-GLSPFDIDEASGL 6672
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+VV LDRE A Y +T+ A D G
Sbjct: 6673 --------------------VVVAGSLDRESAG-SYQVTVSARDDG 6697
Score = 36.6 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F VY TV E+ +GT+++T+ A+D D G+N ++Y +
Sbjct: 1688 NAPRFQQGVYAHTVAEDAVVGTVLVTVAASDPD-TGINDPLTYDL 1731
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG-GDGLGYFTID 58
N P F +Y V E QP+G V+T++A D D N I YS+ G L F ID
Sbjct: 663 NTPQFESSMYIVEVDEGQPVGAHVLTVQAVD-DDANSNGVIDYSIVGDAAALQTFAID 719
Score = 36.2 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
N PVF D QAT+ EN +GT V ++ A DAD N+ +SY
Sbjct: 2933 NNPVFVDTDVQATLVENADVGTAVASVMATDADSAA-NTHVSY 2974
Score = 35.4 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 26/107 (24%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNS-KISYSVRGGDGLGYFTIDNE 60
NAP FS Y A+V EN + T V+ + A DAD G + + S + + F ID E
Sbjct: 3299 NAPAFSQTAYAASVLENAAVDTAVVRVAAQDADEDGTQAVRFSLATHASE----FAIDAE 3354
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
R+V LDRE P+ Y++ + A D
Sbjct: 3355 TGQITTRVV--------------------LDREAVPV-YSVVVTATD 3380
Score = 35.4 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
TV E GT V + A DAD G N+ I+YS+ G+ G+F ID E
Sbjct: 3519 TVSELAGTGTRVGGVTATDADA-GENAAIAYSIVAGNDAGFFAIDTE 3564
>gi|241758144|ref|XP_002401744.1| conserved hypothetical protein [Ixodes scapularis]
gi|215508485|gb|EEC17939.1| conserved hypothetical protein [Ixodes scapularis]
Length = 2750
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 24/120 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL-GYFTIDNE 60
+AP F Y+A+++E+ P G V+T++A D D G N+ + YS+ DG G F ID++
Sbjct: 320 HAPTFEQATYEASIRESVPTGFTVLTVRATDQD-TGSNANVDYSILNPDGTNGAFGIDSK 378
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG-TPPRETYKAT 119
+ I LDRE+ Y L ++A D G R++ AT
Sbjct: 379 SGI--------------------ITTRSSLDRELTSF-YALVVQATDSGPVTDRKSASAT 417
Score = 42.7 bits (99), Expect = 0.042, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 24/109 (22%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y A++ E+ P+GT V+ ++A D D G N+ ++Y T++ + P
Sbjct: 746 PTFERTPYTASIPEDVPVGTTVLVVEARDGD-VGRNALVTY-----------TLEEDVP- 792
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
FR+ P+ ++V + LDRE GY L + A D G PP
Sbjct: 793 -EFRMDPS---------SGSLVTARPLDRERVG-GYTLVVAAQDGGNPP 830
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 21/112 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F ++ TV EN P+G ++ ++A DAD G N++ISY++ +E
Sbjct: 535 NDPKFYTSLFHETVPENVPVGHSIVRVQAYDAD-DGANAEISYTLS----------SSER 583
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P +P +D T + + LDRE + +N + A D GTP R
Sbjct: 584 P-----DLPLNVDDVTGW----VSTTRQLDREESA-SFNFQVVARDHGTPSR 625
Score = 38.9 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 50/117 (42%), Gaps = 30/117 (25%)
Query: 2 NAPVFSDFVYQATVKE-----NQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT 56
N P FS+ Y V E N P V ++A D+D G N+ + YS+ GG+ G+F
Sbjct: 428 NYPQFSERSYSVKVSEDVNWLNHP---EVARIRATDSDQ-GANAALRYSLIGGNTQGHFA 483
Query: 57 IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+D+ ++ VL LD E A Y L +R D GTP R
Sbjct: 484 MDS--------------------LTGSVTVLSPLDYESAR-SYRLVVRVQDGGTPSR 519
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N PVF Y+ATV E P GT V+++ A+D D +S++ Y + G+ F I
Sbjct: 641 NDPVFEPRTYEATVSEADPPGTPVVSVTASDRDE---HSRLVYQIASGNTRERFGI 693
>gi|260828414|ref|XP_002609158.1| hypothetical protein BRAFLDRAFT_131370 [Branchiostoma floridae]
gi|229294513|gb|EEN65168.1| hypothetical protein BRAFLDRAFT_131370 [Branchiostoma floridae]
Length = 2847
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 52/112 (46%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS +Y A++ E+ G VI + A D D P N++++Y++ GD G
Sbjct: 2156 NAPEFSMPMYSASISEDAHTGDSVIQVMATDRDSPP-NAQVTYTIVRGDSKG-------- 2206
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
F I P K + V LDRE Y+LT+RA D G PR
Sbjct: 2207 ---QFNIAP---------KLGIVTVSGALDRE-EIQAYSLTVRAKDSGASPR 2245
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 49/114 (42%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y V EN + TL+ ++A D D G+N K+ YS G F +D
Sbjct: 1859 NPPKFEKQQYLVPVYENTAVNTLLTRVQATDPDM-GLNRKVMYSFVDSAN-GQFQVDENS 1916
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ + + K LDRE A +NLT+RA D+G P R +
Sbjct: 1917 GI--------------------VSLAKALDRE-AQASFNLTIRATDEGAPRRSS 1949
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + Y + V+ + GT V T+ A D D G NS+I YS+ + G
Sbjct: 811 NAPVFVNLPYYSVVQVDAEPGTPVRTVTAVDKD-AGKNSEIRYSL------------DSG 857
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
FRI +K I+V + L+++ Y+L + A DKG PP
Sbjct: 858 AHKRFRI---------NRKTGQIMVKQPLEKDDTNKEYHLVIIAEDKGNPP 899
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 48/109 (44%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+FS Y V E GT V+ + A D D G NS+++Y++ G+ F+ID +
Sbjct: 19 PIFSAQEYTGGVYETAAYGTSVVQVVATDRD-RGANSELTYTIETGNVGNVFSIDETLGI 77
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I V K LDR A Y+LT++ D G PP
Sbjct: 78 --------------------ITVSKQLDRS-ALSQYHLTVKVRDNGNPP 105
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
P F YQ V+E+ GT+VIT+ DAD G N+ +Y + GGD G F I+
Sbjct: 1657 PTFRSSTYQGQVREDALPGTIVITVSTRDAD-IGDNTIPTYYITGGDPQGQFNIE 1710
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y V E+ PIG+ +I + A D G N++I+Y + G+ G F I
Sbjct: 1963 NPPEFEFAEYAKNVSESTPIGSQIINVYAVSKD-VGPNAEITYEIISGNEHGKFEI---- 2017
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
G+ + I ++ LD E A GY LT++A D G P
Sbjct: 2018 --------------GSYSGK--ITIVNTLDYE-ASQGYYLTVKASDGGMP 2050
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++PVFS Y + EN P GT V+ + A D D G +ISYS+ F ID
Sbjct: 1224 HSPVFSQLNYAVSFDENNPRGTYVVMVTATDED-AGAYGEISYSIASEKINQLFEID 1279
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 48/116 (41%), Gaps = 26/116 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY---SVRGGDGLG-YFTI 57
N P F Y+ T+ EN +GT VI + A D D G N +I Y S D + +FTI
Sbjct: 1545 NKPKFDSKPYKITLPENASVGTSVIQVHAFDPD-QGANGEIVYGFASDSNADEMSDFFTI 1603
Query: 58 DNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
D+E + L LDRE+ Y + A DKG P +
Sbjct: 1604 DSESGW--------------------VTTLVPLDREMMS-SYAFGVTATDKGEPKQ 1638
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDNE 60
APVF Y+AT+ E IGT VI + A D D G+N + Y + + YF ID
Sbjct: 1016 APVFEKPSYEATLSEAAAIGTTVIKVSATDLD-SGVNQLMYYQILQDESNSTDYFHIDTS 1074
Query: 61 GPL 63
L
Sbjct: 1075 SGL 1077
>gi|47218472|emb|CAG03744.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1022
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
NAP F VY +++EN P+GTLVI L A D D G N +I YS
Sbjct: 226 NAPTFDQTVYSVSLRENSPVGTLVIQLNATDVD-EGQNGEIVYS 268
>gi|345327140|ref|XP_001505705.2| PREDICTED: protocadherin Fat 4 [Ornithorhynchus anatinus]
Length = 1703
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 50/113 (44%), Gaps = 26/113 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
+ PVF Y+ + E P GT V + AADAD S+ SY V GGD
Sbjct: 1078 DPPVFGAETYRVRISEGVPPGTHVTFVGAADADSVPAWSRFSYRVGPAGGDAF------- 1130
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ P T + + V LDRE P+ YNLT+ AVD GTPP
Sbjct: 1131 ------------SVHPQTGQ----VTVTAPLDRETLPV-YNLTVLAVDTGTPP 1166
Score = 43.1 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVF+ Y V EN P GT V+TL+A DAD G N+ ++Y++ DG F +D
Sbjct: 868 NPPVFAGAEYTPEVAENAPSGTPVVTLRATDAD-SGPNAVVAYALHEADG-DLFAVD 922
Score = 42.0 bits (97), Expect = 0.078, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 50/112 (44%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F + + A + EN P V+ + AAD D G N ++ Y + G+ G+F I
Sbjct: 345 NAPDFREDPFVAEIAENLP-PRRVLAVAAADRDS-GPNGQLDYGIVAGNEEGHFAI---- 398
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I + LDRE P Y LT+RA D+G PPR
Sbjct: 399 ----------------HRATGEIRSTRPLDRESVPR-YRLTVRASDRGDPPR 433
Score = 39.3 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDNE 60
N PV + V +A V ENQP GT+V TL+A+D D P ++ + GG YF +
Sbjct: 1183 NGPVLT--VGEARVAENQPPGTVVTTLRASDPDLPPNQGPFTFRLLGGGPAADYFGLSPA 1240
Query: 61 GPLNHFR 67
G L R
Sbjct: 1241 GLLTTAR 1247
Score = 35.4 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 24/118 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ ++ A++ E+ P GT V+ +DAD N+ +SY + GG+
Sbjct: 38 NTPTFARSLFTASISEDAPAGTDVLLANCSDADASS-NALVSYQLTGGES---------- 86
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
I+P T + I+ LDRE Y L + A D G P + AT
Sbjct: 87 --------QFSINPSTGQ----IITSGPLDRETQA-NYTLIVVARDGGDPLALSSSAT 131
>gi|440905741|gb|ELR56085.1| Protocadherin-20 [Bos grunniens mutus]
Length = 951
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + + T++EN + L A DAD G ++SY + G D YF++D+
Sbjct: 531 NAPVFLQPLVELTIEENNAPNAFLTKLDATDAD-SGERGQVSYFL-GPDAPSYFSLDS-- 586
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ V T++D K+K Y T+RAVD G PP+E+
Sbjct: 587 -VTGILTVSTQLDREEKEK------------------YRYTVRAVDSGKPPQES 621
>gi|329664440|ref|NP_001193160.1| protocadherin-20 [Bos taurus]
gi|296481930|tpg|DAA24045.1| TPA: protocadherin 9-like [Bos taurus]
Length = 951
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + + T++EN + L A DAD G ++SY + G D YF++D+
Sbjct: 531 NAPVFLQPLVELTIEENNAPNAFLTKLDATDAD-SGERGQVSYFL-GPDAPSYFSLDS-- 586
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ V T++D K+K Y T+RAVD G PP+E+
Sbjct: 587 -VTGILTVSTQLDREEKEK------------------YRYTVRAVDSGKPPQES 621
>gi|326673405|ref|XP_003199876.1| PREDICTED: protocadherin beta-16-like [Danio rerio]
Length = 802
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 15/99 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG--LGYFTID- 58
NAP+ VY+ +V EN P GT++ T+KA+DAD G N K+ Y + G + F ID
Sbjct: 233 NAPICFMSVYKTSVAENSPKGTVLTTVKASDAD-QGQNGKVEYHIAKSTGGTINLFEIDR 291
Query: 59 NEGPL-----------NHFRIVPTKIDPGTKKKEYNIVV 86
N G L H++I DPG ++V
Sbjct: 292 NAGVLKLSGDIDYEKVKHYQIDVQARDPGRHSDTCKVIV 330
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVF YQA+V+EN G + T++A DAD N+++SY
Sbjct: 443 NAPVFEQSSYQASVQENNTPGLSIFTVRARDAD-FNQNARVSY 484
Score = 36.6 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 18/110 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFSD + + E+ G + A D D G+N SY ++
Sbjct: 124 NAPVFSDKEIKFDISESSLTGAKFVLETAVD-DDVGLNGVQSYFLQ-------------- 168
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P +HF + + GTK E +++ K LDRE +L L AVD G P
Sbjct: 169 PADHFILKTQDMPDGTKNVE--MILQKPLDREKQE-HISLVLTAVDGGDP 215
>gi|395834630|ref|XP_003790298.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23 [Otolemur garnettii]
Length = 2951
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 22/108 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF +Y+ +VKEN+ G V ++A D D G+NSK+ + + G LG F I++E
Sbjct: 1314 PVFRQHLYEVSVKENRNPGEFVTRVEAVDKD-SGINSKLHFEILPGASLGLFEINSETG- 1371
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+V LDRE+ + + L +R D G P
Sbjct: 1372 -------------------EVVTNTTLDREVQEI-FTLRVRVRDGGVP 1399
Score = 42.4 bits (98), Expect = 0.068, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 11/111 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y ++ E+ P+G+ ++ D D N+ + YS+ G+ YF ++
Sbjct: 2110 HAPEFTVEYYNLSLSEDAPVGSTLVMFSTIDHDWTRENTYVEYSIVSGNSQNYFHVE--- 2166
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
HF + P K+ +V+L LDRE A + L + A D G PP
Sbjct: 2167 --THF---IHSVHP--YKQVGYLVLLHNLDRE-ATARHKLIILASDHGYPP 2209
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
P F YQ++V+E+ +GT+V+ L A D D G+N +I Y + + G FTID
Sbjct: 1494 PSFPTLYYQSSVREDAEVGTVVLRLSAVDKD-EGLNGQIEYFLT-AEASGTFTID 1546
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 28/116 (24%)
Query: 2 NAPVFSDFVY----QATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N P F +++ V E QP+ LV T+ A D D G N+++ YSV DG +F I
Sbjct: 882 NRPFFPQYLHGKELHIKVLEGQPVNMLVTTVFAKDLD-EGNNAEVIYSVSSEDGSDHFKI 940
Query: 58 D-NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
D N G + ++ P Y +T+ A D+G PP
Sbjct: 941 DANSGEIRTTTVLSCDYRP----------------------SYRMTVIASDQGVPP 974
Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N+P FS Y A VKE+ P+G+ + + A D D G +++I Y + GD G+F ++ +
Sbjct: 2226 NSPKFSSPDYYAHVKESTPLGSHITVVSADDHD-VGSHAEIIYHITSGDEKGHFYLEEK 2283
Score = 38.9 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 20/108 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F + +++EN PIGTLV A D D +NS+I YF +
Sbjct: 1098 HSPSFQHELIVISIEENVPIGTLVYVFNAKDGDGSFLNSRIQ----------YFIESHHS 1147
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+N F I P+ GT +V LDRE P LT+ A D+
Sbjct: 1148 GMNPFLIHPSF---GT------LVTASALDRESTP-AVILTVTACDQA 1185
>gi|391338388|ref|XP_003743540.1| PREDICTED: neural-cadherin-like [Metaseiulus occidentalis]
Length = 3036
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 56/112 (50%), Gaps = 28/112 (25%)
Query: 2 NAPVFSDFVYQA-TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP F YQA + E+ PIGT ++ +KA D D G N++I+YS+ D FTID++
Sbjct: 695 NAPRFELPDYQAHNIDEDVPIGTSILKVKATDMD-TGRNAEITYSLDKED----FTIDSK 749
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G NI K LD ++ Y LT++A D+G PP
Sbjct: 750 G---------------------NIYSNKRLDADVNNT-YVLTVKATDRGEPP 779
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNE 60
N P F + +V EN IG+ + T +A DAD G SK+SY + R D FTI+N
Sbjct: 1799 NRPEFEKPNIEVSVPENSTIGSSLATFRATDADQGG-KSKVSYQIDRSSDKRRQFTINNS 1857
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
G + + + LDRE P + + + A+D GTP R
Sbjct: 1858 GV---------------------VKIQRPLDREETPR-HQVKILAIDDGTPAR 1888
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 10/71 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N P FS +Y+A V E++ + VIT+ A D D +S+I Y + G+ G F + NE
Sbjct: 1353 NPPYFSQALYEAEVNEDEDVQHTVITVTAKDKDE---SSRIRYEITQGNIGGAFAVKNET 1409
Query: 61 ------GPLNH 65
GPL++
Sbjct: 1410 GAIFVAGPLDY 1420
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGG----DGLGYF 55
N P F+ V+ V EN G V+T+ A D D P G N+K++YS+ +G F
Sbjct: 1569 NPPFFAGGVFSGNVTENGTAGMTVMTMTATDYDDPMEGTNAKLTYSIEQNQVNENGELIF 1628
Query: 56 TIDNE 60
ID E
Sbjct: 1629 AIDEE 1633
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 48/115 (41%), Gaps = 22/115 (19%)
Query: 12 QATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDNEGPLNHFRIVP 70
Q TV E P GT V ++A D D N+K+ Y++ D G YFTID E +
Sbjct: 1247 QETVLEGMPSGTKVTQVQAVDKDGTYPNNKVYYAIESKDQGDKYFTIDRETG-----DIY 1301
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPRNGLT 125
TK++ DRE L Y + +RA D R + N +T
Sbjct: 1302 TKVE---------------FDRE-EKLAYAIQVRAEDGAASARPHIRGNQPNAVT 1340
>gi|190339880|gb|AAI63753.1| Protocadherin 1 gamma 32 [Danio rerio]
Length = 961
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 19/113 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F + + T+ EN P GTLV L A+DAD G N +ISY T D
Sbjct: 255 NAPHFLNPTKRVTLLENSPHGTLVTLLNASDAD-HGQNGEISY-----------TFDKYT 302
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
P + ++ +D T + I V L+D E+A + +++T+ A DKG PP E
Sbjct: 303 PDSVLKLF--SVDSVTGE----IRVTGLIDHELAKV-HDVTVLARDKGMPPME 348
Score = 35.8 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 22/117 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P S + + + E+ +GT++ +K D D G N +++ + G
Sbjct: 363 NTPEISINMVSSVISEDVTLGTVIALIKVKDEDT-GKNGEVNLHIPYG------------ 409
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
+P KI K + ++ LLDRE A Y +T+ A D G+PPR + K+
Sbjct: 410 -------LPFKIS-SPYKGLFTLMADGLLDRE-AVAEYTITVTATDSGSPPRSSQKS 457
>gi|402902144|ref|XP_003913980.1| PREDICTED: protocadherin-20 [Papio anubis]
Length = 952
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F + + T++EN + L A DAD G ++SY + G D YF++D+
Sbjct: 532 NAPIFLQPLIELTIEENNSPNAFLTKLYATDAD-SGERGQVSYFL-GPDAPSYFSLDS-- 587
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ V T++D K+K Y T+RAVD G PPRE+
Sbjct: 588 -VTGILTVSTQLDREEKEK------------------YRYTVRAVDCGKPPRES 622
>gi|395527494|ref|XP_003765879.1| PREDICTED: protocadherin-20 [Sarcophilus harrisii]
Length = 936
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ + + +++EN + L A DAD G ++SY + G D YF +D
Sbjct: 516 NAPVFTQPLIELSIEENNAPNAFLTKLHATDAD-SGERGQVSYFL-GPDAPSYFVLDK-- 571
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ V T++D K+K Y T++AVD G PPRE+
Sbjct: 572 -ITGILTVSTQLDREEKEK------------------YRYTVKAVDSGIPPRES 606
>gi|148678175|gb|EDL10122.1| mCG133388, isoform CRA_e [Mus musculus]
Length = 930
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
NAPVF+ Y +VKEN P+GT ++T+KA D D G N +++YS R
Sbjct: 237 NAPVFTQPEYHISVKENLPVGTRLLTIKATDPD-EGANGEVTYSFR 281
>gi|195437548|ref|XP_002066702.1| GK24627 [Drosophila willistoni]
gi|194162787|gb|EDW77688.1| GK24627 [Drosophila willistoni]
Length = 3471
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 40/120 (33%), Positives = 56/120 (46%), Gaps = 26/120 (21%)
Query: 2 NAPVFSDFVYQA-TVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTI 57
NAP +D +V+E QP GT V+ ++A D D G N+ I+YS+ R DG G F+I
Sbjct: 1220 NAPEIADPQEDVVSVREEQPPGTEVVRIRAIDRD-SGQNASITYSIVKGRDSDGHGLFSI 1278
Query: 58 DNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
D + + R V LD E + Y L + A D G PP+ET +
Sbjct: 1279 DPQTGVIRTRTV--------------------LDHEERSI-YRLGVAATDGGQPPKETLR 1317
Score = 42.0 bits (97), Expect = 0.073, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG-- 61
P+F Y VKE++P+GT+V ++ A+ +D I YS+ GD GYF+I++
Sbjct: 788 PIFEKQRYNYQVKEDKPMGTVVGSVMASSSD-SAQRGGIRYSIYSGDPDGYFSIESSSGN 846
Query: 62 -----PLNH 65
PL+H
Sbjct: 847 IRIAHPLDH 855
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT 56
N P+F Y T+ EN+PIG ++ + A+D D G+N+ ++Y++ G+G + T
Sbjct: 567 NEPIFDQSFYNVTIAENEPIGRCILKVSASDPD-CGVNAMVNYTL--GEGFKHLT 618
Score = 38.9 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 10/108 (9%)
Query: 21 IGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFRIVPTK--IDPGT 77
IG +V + A D D G N +ISYS+ G+G G F I++E G + + +P +D
Sbjct: 1579 IGEVVTHVVAMDPDK-GANGQISYSILSGNGEGRFRINSETGEIELVKSLPVSAGVDDLD 1637
Query: 78 KKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGT---PPR---ETYKAT 119
K +N+++ + L L L+ V KG+ PPR Y+AT
Sbjct: 1638 KNGRFNLLIRAADHGQPQSLESTLKLQIVVKGSHSHPPRFLSALYRAT 1685
Score = 38.9 bits (89), Expect = 0.77, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P FS + ATV E GT V ++A DAD G N+++ Y + G+ F I+
Sbjct: 2289 NSPQFSQHQFVATVWEGNSKGTYVAQVQAFDAD-AGANARLRYHIVDGNHDNAFVIEPA- 2346
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
IV T I +LDREI + Y L + A D+G P
Sbjct: 2347 ---FSGIVKTNI---------------VLDREIRDV-YQLKIIATDEGVP 2377
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 16/114 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F Y + E +P+ T +I + A D D G N++++Y + G+ +I N
Sbjct: 998 NPPLFERDEYAVNISEVRPVNTQIIQVNATDRD-TGNNARLTYRIVDA-GVDNVSISNSH 1055
Query: 62 PLN----HFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L+ HF + P + + LDRE Y LT+ A D GTP
Sbjct: 1056 ALSDISQHFGVFPN---------SGWLYLRSPLDREQRDR-YQLTVMATDNGTP 1099
Score = 35.4 bits (80), Expect = 8.0, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P+F+ Y ATV EN +GT V+ + A+D D N + Y++ R D F ID+
Sbjct: 242 NQPIFNQSRYFATVPENSTVGTSVLQVYASDTD-ADENGLVEYAINRRQSDKEQMFRIDS 300
Query: 60 E 60
+
Sbjct: 301 Q 301
>gi|62087498|dbj|BAD92196.1| protocadherin beta 9 precursor variant [Homo sapiens]
Length = 716
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 20/108 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ +Y+ EN P+G+L++ + A DAD G+N+++SYS F +E
Sbjct: 157 NVPQFAQALYETQAPENSPVGSLIVKVSAGDAD-SGVNAEVSYS---------FFDASED 206
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
L F+I P + I + +LLD E+ Y + ++A+D G
Sbjct: 207 ILTTFQINPFSGE---------IFLRELLDYELVN-SYKINIQAMDGG 244
>gi|431904870|gb|ELK10007.1| Protocadherin-20 [Pteropus alecto]
Length = 952
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + + T++EN + L A DAD G +++Y + G D YF++D+
Sbjct: 532 NAPVFLQPLIELTIEENNAPDAFLTKLYATDADS-GERGQVTYFL-GPDAPSYFSLDS-- 587
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ V T++D K+K Y T+RAVD G PPRE+
Sbjct: 588 -VTGILTVSTQLDREEKEK------------------YRYTVRAVDSGKPPRES 622
>gi|198475184|ref|XP_002132853.1| GA26057 [Drosophila pseudoobscura pseudoobscura]
gi|198138709|gb|EDY70255.1| GA26057 [Drosophila pseudoobscura pseudoobscura]
Length = 3586
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 40/120 (33%), Positives = 56/120 (46%), Gaps = 26/120 (21%)
Query: 2 NAPVFSDFVYQA-TVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTI 57
NAP +D +V+E QP GT V+ ++A D D G N+ I+YS+ R DG G F+I
Sbjct: 1252 NAPEIADPQEDVVSVREEQPPGTEVVRIRATDRD-HGQNASITYSIVKGRDSDGHGLFSI 1310
Query: 58 DNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
D + R+V LD E + Y L + A D G PP+ET +
Sbjct: 1311 DPATGVIRTRVV--------------------LDHEERSI-YRLGVAATDGGQPPKETLR 1349
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P FS + ATV E GT V ++A D+D G N+++ Y + G+ F I+
Sbjct: 2322 NSPQFSQRQFVATVSEGNSKGTFVAQVQAFDSD-AGANARLRYHIVDGNHDNAFVIEPA- 2379
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
IV T I +LDREI + YNL + A D+G P
Sbjct: 2380 ---FSGIVKTNI---------------VLDREIRDV-YNLKIIATDEGVP 2410
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT 56
N P+F Y +V EN+P+G ++ + A+D D G+N+ ++Y++ G+G + T
Sbjct: 606 NEPIFDQSFYNVSVAENEPVGRCILKVSASDPD-CGVNAMVNYTL--GEGFKHLT 657
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y A+V E+ P+G V+ +KA DAD G+N+++ YS+ + F ID++
Sbjct: 1955 NAPRFDLPKYVASVAEDAPLGASVVRIKATDAD-LGVNARLVYSL-ANETQWQFAIDSKS 2012
Query: 62 PL 63
L
Sbjct: 2013 GL 2014
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+F Y VKE+ P GT+V ++ A D S + YS+ GD GYF I EG
Sbjct: 824 PIFEKARYNYYVKEDIPQGTVVGSVIATSGD-TAHRSPVRYSIYSGDPDGYFGI--EGGS 880
Query: 64 NHFRI 68
+ RI
Sbjct: 881 GNIRI 885
Score = 36.2 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 50/116 (43%), Gaps = 24/116 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P+F+ Y ATV EN +GT V+ + A+D D N + Y++ R D F
Sbjct: 281 NQPIFNQSRYFATVPENATVGTSVLQVYASDTDAE-ENGLVEYAINRRQSDKEQMF---- 335
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+IDP T I + K LD E L + L + A D G P ET
Sbjct: 336 ------------RIDPQTGA----IFINKALDFETKEL-HELVVVAKDHGEQPLET 374
>gi|426350299|ref|XP_004065326.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin alpha-3 [Gorilla
gorilla gorilla]
Length = 811
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 25/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR---GGDGLGYFTID 58
NAP F +Y+ + EN P GTLV+T+ A D D G+N I+YS D L F +D
Sbjct: 238 NAPAFERTIYKVRLFENAPNGTLVVTVNATDLD-EGVNKDIAYSFNTDMSADILSKFHLD 296
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+N V ID K Y + + A DKG PP
Sbjct: 297 ---PVNGQISVKGNIDFEESKS------------------YEIQVEATDKGNPP 329
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F+ Y VKEN P G + T+ A DAD N+ +SYS+
Sbjct: 451 NAPAFAQSEYTVFVKENNPPGCHIFTVSARDADAQ-ENALVSYSL 494
Score = 35.4 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF V + E++ G+ A+DAD G NS ++YS+ D YFT+D +
Sbjct: 129 NAPVFPMAVKNLFISESRQPGSRFSLEGASDAD-IGTNSLLTYSL---DSTEYFTLDVK- 183
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
N I K +V+ K L+RE P Y L + A+D G P
Sbjct: 184 -RNDEEI-----------KSLGLVLKKNLNREDTPKHY-LLITAIDGGKP 220
>gi|119514235|gb|ABL75898.1| protocadherin 2G23 [Takifugu rubripes]
Length = 979
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 38/67 (56%), Gaps = 10/67 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY+ATV EN P T V T+ A+DAD G NS ++Y YF+ + G
Sbjct: 267 NAPVFNQSVYKATVLENSPADTYVTTVNASDAD-SGSNSIVTY---------YFSDTSSG 316
Query: 62 PLNHFRI 68
N F I
Sbjct: 317 VRNIFTI 323
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVF VY A + EN G V+TL+A D D N++ISY
Sbjct: 477 NAPVFPQAVYSAPIVENNSPGVSVLTLRAKDPD-ENQNARISY 518
>gi|348514367|ref|XP_003444712.1| PREDICTED: protocadherin gamma-B7-like [Oreochromis niloticus]
Length = 1225
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG 48
NAPVF+ +Y+A++ EN PI T+V T+ A DAD G+N +++Y G
Sbjct: 236 NAPVFTHTIYEASLPENSPIDTVVATVSATDAD-EGVNGEVTYEFSG 281
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVFS VY+A++ EN P+ +VIT+ A DAD G+N +++Y
Sbjct: 724 NAPVFSQAVYEASLPENSPLDIVVITVSATDAD-EGVNGEVTY 765
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 22/117 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+ + + V EN P+GT V + D D N ++ + ++ G
Sbjct: 829 NAPITTIKSLKNPVPENSPLGTEVGIVNVQDRDSES-NGQVRFFIQQG------------ 875
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
VP K+ P K Y++V LDRE+ YN+T+ A+D+G+PP + K
Sbjct: 876 -------VPFKLVPSIKNY-YSLVTTGQLDRELVS-DYNITITAIDEGSPPLSSSKC 923
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 22/117 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPV + E+ G V + DAD G N ++ S++ G
Sbjct: 341 NAPVIHISSLSNRIPESISSGAEVGIIHVQDADS-GENQQVRCSIQQG------------ 387
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
VP K+ P K Y++V LDRE+ YN+T+ A D+G+PP + K
Sbjct: 388 -------VPFKLVPSIKNY-YSLVTTGQLDRELVS-DYNITITATDEGSPPLSSSKC 435
>gi|426249950|ref|XP_004018709.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Ovis aries]
Length = 4184
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 51/115 (44%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
NAP F Y V E+ P T V+ + A D D N ++ Y+ + G DG G FTI+
Sbjct: 935 NAPQFVASHYTGLVSEDAPPFTSVLQISATDRDAHA-NGRVQYTFQNGEDGDGDFTIEPT 993
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ + ++ LDRE P+ Y LT AVD+G PP T
Sbjct: 994 SGI--------------------VRTVRRLDREAVPV-YELTAYAVDRGVPPLRT 1027
Score = 40.0 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y + E+ +GT V+++ A D D NS ISY + GG+ F I +G
Sbjct: 730 NRPEFTMKEYHLRLNEDATVGTSVVSVTAVDRDA---NSAISYQITGGNTRNRFAISTQG 786
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREI 94
+ +V + K++ Y +VL DR +
Sbjct: 787 GVG---LVTLALPLDYKQERYFKLVLTASDRAL 816
Score = 40.0 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG 48
+ P+F +Q +V EN P+G VI ++A DAD G NS++ YS+ G
Sbjct: 625 HTPIFVSTPFQVSVLENAPLGHSVIHIQAVDAD-HGENSRLEYSLTG 670
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS+ Y A V+E+ T+V+ + A D D N + Y++ G+ G+F ID+
Sbjct: 519 NAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDA-NGLVHYNIISGNSRGHFAIDS-- 575
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I V+ LD E A Y L +RA D G PP
Sbjct: 576 ------------------LTGEIQVVAPLDFE-AEREYALRIRAQDAGRPP 607
Score = 38.9 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF Y +V E++P+G+ V+ + A+D D G N++I+Y + D L F ID
Sbjct: 834 PVFQSAHYSVSVNEDRPVGSTVVVISASD-DDVGENARITYLLE--DNLPQFRID 885
Score = 36.2 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAPVF ++ VKEN +G++V + A D D G N+ I Y + G+ F +D
Sbjct: 1041 NAPVFPAEEFEVRVKENSIVGSVVAQITAVDPD-EGPNAHIMYQIVEGNIPELFQMD 1096
>gi|291232409|ref|XP_002736151.1| PREDICTED: FAT tumor suppressor homolog 1-like [Saccoglossus
kowalevskii]
Length = 2630
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 55/118 (46%), Gaps = 20/118 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF +YQA+V EN + T++ T+ A DAD N+ Y Y ++
Sbjct: 1409 NPPVFDPNLYQASVYENASLNTILGTVYATDADHSSTNNSRFY---------YTIAESTN 1459
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
P N F + P ++ + + LDRE Y LT++AVD G PP T AT
Sbjct: 1460 PKNQFHVGP---------EDGIVTISNELDRETVEYHY-LTIQAVDYG-PPSLTGNAT 1506
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 19/110 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
NAP F + Y TV E+ GT V+T+ A D D P G N++ +Y + I+N
Sbjct: 1191 NAPTFPNGPYMGTVPEHSLAGTYVMTMAAVDLDDPNEGDNAQCTYKI----------IEN 1240
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
V IDP T + ++ LDRE P+ YN+ + A D G
Sbjct: 1241 AEKDGE---VIFAIDPVTAEI---TTLVDWLDREDVPV-YNIVVEATDGG 1283
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
NAP F + ATV+E++ G + T+ A D D G NS+I Y + G+ G F +
Sbjct: 982 NAPAFDSTEFYATVEEDRETGFAITTVTATDED-EGANSQIRYQITSGNLGGVFRV 1036
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P F Y+ ++E+ +GT + + A DAD G N++ISYS+ + YF+++N
Sbjct: 648 NTPHFEQRSYEYQLREDTQVGTSFLRVAAQDAD-TGYNAEISYSLSDEE---YFSVNN 701
>gi|149018495|gb|EDL77136.1| cadherin EGF LAG seven-pass G-type receptor 3 [Rattus norvegicus]
Length = 3148
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 51/115 (44%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
NAP F Y V E+ P T V+ + A D D N ++ Y+ + G DG G FTI+
Sbjct: 948 NAPQFVASHYTGLVSEDAPPFTSVLQISATDRDAHA-NGRVQYTFQNGEDGDGDFTIEPT 1006
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ + ++ LDRE P+ Y LT AVD+G PP T
Sbjct: 1007 SGI--------------------VRTVRRLDREAVPV-YELTAYAVDRGVPPLRT 1040
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y + E+ +GT V+++ A D D NS ISY + GG+ F I +G
Sbjct: 743 NRPEFTMKEYHLRLNEDAAVGTSVVSVTAVDRDA---NSAISYQITGGNTRNRFAISTQG 799
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREI 94
+ +V + K++ Y +VL DR +
Sbjct: 800 GMG---LVTLALPLDYKQERYFKLVLTASDRAL 829
Score = 40.4 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG 48
++P+F +Q +V EN P+G VI ++A DAD G NS++ YS+ G
Sbjct: 638 HSPIFVSTPFQVSVLENAPLGHSVIHIQAVDAD-HGENSRLEYSLTG 683
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS+ Y A V+E+ T+V+ + A D D N + Y++ G+ G+F ID+
Sbjct: 532 NAPQFSEKRYVAQVREDVRPHTVVLRVTATDKDKDA-NGLVHYNIISGNSRGHFAIDS-- 588
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I V+ LD E A Y L +RA D G PP
Sbjct: 589 ------------------LTGEIQVMAPLDFE-AEREYALRIRAQDAGRPP 620
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF Y ++ E++P+G+ V+ + A+D D G N++I+Y + D L F ID
Sbjct: 847 PVFQSAHYSVSMNEDRPVGSTVVVISASD-DDVGENARITYLLE--DNLPQFRID 898
Score = 36.2 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAPVF ++ VKEN +G++V + A D D G N+ I Y + G+ F +D
Sbjct: 1054 NAPVFPAEEFEVRVKENSIVGSVVAQITAVDPD-DGPNAHIMYQIVEGNIPELFQMD 1109
>gi|431913398|gb|ELK15073.1| Cadherin EGF LAG seven-pass G-type receptor 3 [Pteropus alecto]
Length = 2408
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 41/116 (35%), Positives = 53/116 (45%), Gaps = 25/116 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
NAP F Y V E+ P T V+ + A D D N ++ Y+ + G DG G FTI+
Sbjct: 707 NAPQFVASHYTGLVSEDAPPFTSVLQISATDRDAHA-NGRVQYTFQNGEDGDGDFTIE-- 763
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIV-VLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
PT IV ++ LDRE P+ Y LT AVD+G PP T
Sbjct: 764 ---------PTS----------GIVRTVRRLDREAMPV-YELTAYAVDRGVPPLRT 799
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y + E+ +GT V+++ A D D NS ISY + GG+ F I +G
Sbjct: 502 NRPEFTMKEYHLRLNEDAAVGTSVVSVTAVDRDA---NSAISYQITGGNTRNRFAISTQG 558
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREI 94
+ +V + K++ Y +VL DR +
Sbjct: 559 GIG---LVTLALPLDYKQERYFKLVLTASDRAL 588
Score = 39.7 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS+ Y A V+E+ T+V+ + A D D N + Y++ G+ G+F ID+
Sbjct: 291 NAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDA-NGLVHYNIISGNSRGHFAIDS-- 347
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I V+ LD E A Y L +RA D G PP
Sbjct: 348 ------------------LTGEIQVVAPLDFE-AEREYALRIRAQDAGRPP 379
Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF Y +V E++P+G+ V+ + A+D D G N++I+Y + D L F ID
Sbjct: 606 PVFQSAHYSVSVNEDRPVGSTVVVISASD-DDVGENARITYLLE--DNLPQFRID 657
Score = 39.3 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG 48
+ P+F +Q +V EN P+G VI ++A DAD G N+++ YS+ G
Sbjct: 397 HTPIFVSTPFQVSVLENAPLGHSVIHIQAVDAD-HGENARLEYSLTG 442
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAPVF ++ VKEN +G++V + A D D G N+ I Y + G+ F +D
Sbjct: 813 NAPVFPAEEFEVRVKENSIVGSVVAQITAVDPD-EGPNAHIMYQIVEGNIPELFQMD 868
>gi|354492227|ref|XP_003508251.1| PREDICTED: protocadherin gamma-A4-like [Cricetulus griseus]
Length = 911
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
NAPVF+ Y +VKEN P+GT ++T+KA D D G N +++YS R
Sbjct: 336 NAPVFTQPEYLVSVKENLPVGTRLLTIKATDPD-EGANGEVTYSFR 380
>gi|197098194|ref|NP_001125246.1| cadherin-6 [Pongo abelii]
gi|55727434|emb|CAH90472.1| hypothetical protein [Pongo abelii]
Length = 790
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P+F+ VY ATV E +GT V+ + A DAD P G ++K+ YS+ G YF++++
Sbjct: 155 NEPIFTKEVYSATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQ--PYFSVES 212
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTP--PR 113
E + + +D +++ ++ K + ++ L N+TL V+ P P+
Sbjct: 213 ETGI--IKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQ 270
Query: 114 ETYK 117
TY+
Sbjct: 271 STYQ 274
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ E+ P+GT + +KA+DAD G N++I YS+ G+GL F + +
Sbjct: 264 NPPRFPQSTYQFRTPESSPLGTPIGRIKASDAD-VGENAEIEYSITDGEGLDMFDVITDQ 322
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
I K+ KKK Y + V
Sbjct: 323 ETQEGIITVKKLLDFEKKKVYTLKV 347
>gi|57528929|ref|NP_001009594.1| protocadherin 2 alpha b 7 precursor [Danio rerio]
gi|53748794|dbj|BAD52311.1| cadherin-related neuronal receptor variable 7 [Danio rerio]
gi|53748814|dbj|BAD52324.1| cadherin-related neuronal receptor variable 7 [Danio rerio]
Length = 939
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 56/115 (48%), Gaps = 19/115 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y+A + EN P+GT +IT+ A DAD G+N +I YS + N+
Sbjct: 235 NIPVFTKSLYKARIPENAPVGTSIITVNARDAD-EGLNGEIEYS--------FIKHKNDR 285
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ F I + I VL LD E + + ++A DKG+ PR +
Sbjct: 286 IIESFAI---------NEVSGEITVLGKLDHE-SNNAVEIRVQARDKGSLPRAAH 330
Score = 35.4 bits (80), Expect = 8.6, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F + V VKEN IG ++ T+ A D D G N++I+YS+
Sbjct: 448 NAPRFPEPVINVYVKENSQIGAVLHTVSAVDPD-VGDNARITYSL 491
>gi|390460431|ref|XP_002745424.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23-like [Callithrix
jacchus]
Length = 2880
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 22/109 (20%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
APVF +Y+A+VKENQ G V+ ++A D D G+NSK+ + + G F I++
Sbjct: 1230 APVFKQQLYEASVKENQNPGEFVVRVEALDRD-SGVNSKLQFEIMPGASFELFQINS--- 1285
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
D G +V +LDREI + + L + D G P
Sbjct: 1286 -----------DTG------EVVTTTMLDREIQEV-FTLRVLVRDGGVP 1316
Score = 42.4 bits (98), Expect = 0.067, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F +YQA+V E Q +I + A D D G+N I YS+ G+ F ID
Sbjct: 1747 NSPCFEQSIYQASVSEGQFYNASIIQVFATDLD-SGLNGLIEYSILSGNQEAAFRIDALS 1805
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ I +LD E+ Y+L ++A DKG P
Sbjct: 1806 GV--------------------ITTNAILDYELTS-SYSLIVQATDKGMP 1834
Score = 39.7 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++P F YQ++V+E+ +GT+V+ L A D D G+N + Y + + G FTID
Sbjct: 1438 HSPSFPTLYYQSSVREDAEVGTVVLMLSAVDKD-EGLNGQTEYLLT-DEASGAFTID 1492
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N PVFS YQATV E+ P+G V+T+ A D + N ISY +
Sbjct: 1952 NPPVFSQEFYQATVPESIPVGYSVLTVSATDLES---NESISYRI 1993
Score = 38.5 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 20/108 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F + + +V+EN PIGTLV A D D +N +I Y Y N G
Sbjct: 1015 HSPSFQNELIVISVEENVPIGTLVYVFNAKDGDGSFLNGRIQY---------YIESHNPG 1065
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+N F I P+ GT +V + LDRE P LT+ A D+
Sbjct: 1066 -MNPFLIHPSF---GT------LVTVSPLDRESIPT-VILTVTASDQA 1102
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 28/116 (24%)
Query: 2 NAPVFSDFV----YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N P+F + V E QP+ LV T+ A D D G N+++ YSV D +F I
Sbjct: 799 NKPLFPQCLPGKELHVKVLEGQPVNMLVTTVFAKDPD-EGNNAEVVYSVSSEDSSDHFKI 857
Query: 58 D-NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
D N G + I+ P Y +T+ A D+G PP
Sbjct: 858 DANSGEIRTTTILSYDYRP----------------------SYRMTVIATDQGMPP 891
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI-DNE 60
N P FS Y VKE+ P+G+ + + A D D G +++I Y + G+ G+F + +N
Sbjct: 2170 NPPNFSSLSYHTHVKESTPLGSHITVVSANDRD-TGSHAEIIYHIISGNEKGHFYLEENT 2228
Query: 61 GPL 63
G L
Sbjct: 2229 GVL 2231
Score = 35.4 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 11/111 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y ++ E+ IG+ ++T D D N+ + YS+ G+ F ++
Sbjct: 2054 HAPEFTVKSYNLSLSEDALIGSTLVTFSNIDRDWTPENTYVEYSIISGNLQSNFHVETNF 2113
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ + K+ +V+L LDRE A + + + A D G PP
Sbjct: 2114 IHSEY----------PYKQVAYLVLLHSLDRE-ASASHEIVILASDSGCPP 2153
>gi|350591205|ref|XP_003483227.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3-like [Sus
scrofa]
Length = 2864
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
NAP F Y V E+ P T V+ + A D D +N ++ Y+ + G DG G FTI+
Sbjct: 510 NAPQFVASHYTGLVSEDAPPFTSVLQISATDRD-AHVNGRVQYTFQNGEDGDGDFTIEPT 568
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ + ++ LDRE P+ Y LT AVD+G PP T
Sbjct: 569 SGI--------------------VRTVRWLDREAVPV-YELTAYAVDRGVPPLRT 602
Score = 40.0 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y + E+ +GT V+++ A D D NS ISY + GG+ F I +G
Sbjct: 305 NRPEFTMKEYHLRLNEDATVGTSVVSVTAVDRDA---NSAISYQITGGNTRNRFAISTQG 361
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREI 94
+ +V + K++ Y +VL DR +
Sbjct: 362 GVG---LVTLALPLDYKQERYFKLVLTASDRAL 391
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF Y V E+QP+G+ V+ + A+D D G N++I+Y + D L F ID
Sbjct: 409 PVFQSAHYSVKVNEDQPVGSTVVVISASD-DDVGENARITYLLE--DNLPQFRID 460
Score = 36.2 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAPVF ++ VKEN +G++V + A D D G N+ I Y + G+ F +D
Sbjct: 616 NAPVFPAEEFEVRVKENSIVGSVVAQITAVDPD-EGPNAHIMYQIVEGNIPELFQMD 671
>gi|348581858|ref|XP_003476694.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 isoform 1
[Cavia porcellus]
Length = 3302
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 51/115 (44%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
NAP F Y V E+ P T V+ + A D D N ++ Y+ + G DG G FTI+
Sbjct: 947 NAPQFVTSHYTGLVSEDAPPFTSVLQISATDRDAHA-NGRVQYTFQNGEDGDGDFTIEPT 1005
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ + ++ LDRE P+ Y LT AVD+G PP T
Sbjct: 1006 SGI--------------------VRTVRRLDREAVPV-YELTAYAVDRGVPPLRT 1039
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y + E+ +GT V+++ A D D N+ ISY + GG+ F I +G
Sbjct: 742 NRPEFTTKEYHLRLNEDAAVGTSVVSVTAVDRDA---NNAISYQITGGNTRNRFAISTQG 798
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREI 94
+ +V + K++ Y +VL DR +
Sbjct: 799 GVG---LVTLALPLDYKQERYFKLVLTASDRAL 828
Score = 38.9 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS+ Y A V+E+ T+V+ + A D D N + Y++ G+ G+F ID+
Sbjct: 531 NAPQFSEKRYVAQVREDVRPHTVVLRVTATDQDKDA-NGLVHYNIISGNSRGHFAIDS-- 587
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I V+ LD E A Y L +RA D G PP
Sbjct: 588 ------------------LTGEIQVVAPLDFE-AEREYVLRIRAQDAGRPP 619
Score = 38.9 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG 48
+ P+F +Q +V EN P+G VI ++A DAD G N+++ YS+ G
Sbjct: 637 HTPIFVSTPFQVSVLENAPLGHSVIHIQAVDAD-HGENARLEYSLTG 682
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF Y ++ E++P+G+ V+ + A+D D G N++I+Y + D L F ID
Sbjct: 846 PVFQSAHYSVSMNEDRPVGSTVVVISASD-DDVGENARITYLLE--DNLPQFRID 897
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAPVF ++ VKEN +G++V + A D D G N+ I Y + G+ F +D
Sbjct: 1053 NAPVFPAEEFEVRVKENSIVGSVVAQITAVDPD-EGPNAHIMYQIVEGNIPELFQMD 1108
>gi|241121657|ref|XP_002403288.1| protocadherin fat, putative [Ixodes scapularis]
gi|215493397|gb|EEC03038.1| protocadherin fat, putative [Ixodes scapularis]
Length = 2933
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y ATV E+ +GTLV + A D D G N ++SYS G+F+ID
Sbjct: 1843 NAPAFGQDAYTATVAEDVDVGTLVAKVHATDRD-LGFNRRVSYSFV-DSARGHFSIDETS 1900
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ +++ + LDRE +NLT++A D GTP
Sbjct: 1901 GI--------------------VMLNRPLDRE-ERATFNLTVQASDHGTP 1929
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 40/112 (35%), Positives = 49/112 (43%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F Y+A+V EN G V L A DAD KI+Y G N+
Sbjct: 1531 NAPMFDSASYRASVAENAEEGCAVAKLTAHDAD---RLQKITYEFYEG---------NDP 1578
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ FR+ GT + L LDRE P YN T+ A D G PPR
Sbjct: 1579 AADIFRVDAIT---GT------VTTLVALDREAVP-SYNFTVSARDDGLPPR 1620
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 12/101 (11%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN-- 59
++P F+ VY+A + EN+ G V T+ A D D G ++Y++R D +F IDN
Sbjct: 1205 HSPAFTHTVYEAALPENRDAGFPVATVTATDKD-RGHFGHVTYAIRSDDCATHFRIDNAT 1263
Query: 60 -----EGPLN----HFRIVPTKIDPGTKKKEYNIVVLKLLD 91
PL+ H ++P G + + +V + + D
Sbjct: 1264 GEIFTTKPLDRESRHLYLIPVSATDGGGRLAFTMVRVTVTD 1304
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P FS Y A V E +G V+ + A D G+N++++Y G+ LG+F+ID
Sbjct: 1947 NPPEFSRKFYHAVVSEASAVGVEVLKVLATSRDS-GLNAEVTYFFSAGNELGHFSID 2002
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 25/109 (22%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+FS Y +V E P T ++ + A+D D G N+++ YS+ L
Sbjct: 1000 PMFSQPSYNTSVSEATPYTTSILKVHASDRD-TGANARVQYSLEA------------SAL 1046
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKL-LDREIAPLGYNLTLRAVDKGTP 111
+ F I P + ++ L++ LD E PL Y+L + A D G+P
Sbjct: 1047 STFHIDPVE----------GVIDLRVPLDHEAQPL-YHLVVTATDAGSP 1084
Score = 36.2 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT-IDNE 60
N P F+ Y A V+E +P+G V+ +D D + + + G+ G F + +
Sbjct: 2157 NPPHFAQANYSAIVQEGKPVGFTVLKFTVSDPDSSPNGAPFALEIISGNEDGTFRLVQTD 2216
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
L +K+DP + + Y L +RA D G PP
Sbjct: 2217 STLR----TASKLDPKLRSE------------------YELVVRASDSGAPP 2246
Score = 35.8 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F Y V E P G V+ + A+D D + +++YS+ GG+ F ID +
Sbjct: 1103 NPPAFPQLSYSCAVSELAPRGQFVMRVAASDPDSSDRD-RLAYSIVGGNEAQAFAIDRK 1160
>gi|149017319|gb|EDL76370.1| rCG49295, isoform CRA_f [Rattus norvegicus]
Length = 930
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
NAPVF+ Y +VKEN P+GT ++T+KA+D D G N +++YS R
Sbjct: 237 NAPVFTQPEYHISVKENLPVGTRLLTVKASDPD-EGANGEVTYSFR 281
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 24/117 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP + ++++E P GT++ D+D G +GL +I +
Sbjct: 342 NAPEVTVTSLTSSIQETSPPGTVIALFNVHDSD------------SGENGLVTCSIPDNL 389
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP--RETY 116
P FR+ T + +++ + LDRE YN+T+ A D+GTPP ETY
Sbjct: 390 P---FRL------EKTYGNYHQLLIHRTLDREEVS-DYNITITATDQGTPPLSTETY 436
>gi|291393058|ref|XP_002713025.1| PREDICTED: protocadherin 20 [Oryctolagus cuniculus]
Length = 952
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + + T++EN + L A DAD G ++ Y + G D YF++DN
Sbjct: 532 NAPVFLQPLIELTIEENNAPNAFLTKLYATDAD-SGERGQVLYFL-GPDAPSYFSLDN-- 587
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ V T++D K+K Y T+RAVD G PPRE+
Sbjct: 588 -VTGILTVSTQLDREEKEK------------------YRYTVRAVDCGKPPRES 622
>gi|46575717|gb|AAH69064.1| PCDHA3 protein [Homo sapiens]
Length = 824
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 25/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR---GGDGLGYFTID 58
NAP F +Y+ + EN P GTLV+T+ A D D G+N I+YS D L F +D
Sbjct: 238 NAPAFERTIYKVRLLENAPNGTLVVTVNATDLD-EGVNKDIAYSFNTDMSADILSKFHLD 296
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+N V ID K Y + + A DKG PP
Sbjct: 297 ---PVNGQISVKGNIDFEESKS------------------YEVQVEATDKGNPP 329
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP FS Y VKEN P G + T+ A DAD N+ +SYS+
Sbjct: 451 NAPAFSQSEYTVFVKENNPPGCHIFTVSARDADAQ-ENALVSYSL 494
Score = 35.4 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF V + E++ G+ A+DAD G NS ++YS+ D YFT+D +
Sbjct: 129 NAPVFPMAVKNLFISESRQPGSRFSLEGASDAD-IGTNSLLTYSL---DSTEYFTLDVK- 183
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
N I K +V+ K L+RE P Y L + A+D G P
Sbjct: 184 -RNDEEI-----------KSLGLVLKKNLNREDTPKHY-LLITAIDGGKP 220
>gi|348581860|ref|XP_003476695.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 isoform 2
[Cavia porcellus]
Length = 3309
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 51/115 (44%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
NAP F Y V E+ P T V+ + A D D N ++ Y+ + G DG G FTI+
Sbjct: 947 NAPQFVTSHYTGLVSEDAPPFTSVLQISATDRDAHA-NGRVQYTFQNGEDGDGDFTIEPT 1005
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ + ++ LDRE P+ Y LT AVD+G PP T
Sbjct: 1006 SGI--------------------VRTVRRLDREAVPV-YELTAYAVDRGVPPLRT 1039
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y + E+ +GT V+++ A D D N+ ISY + GG+ F I +G
Sbjct: 742 NRPEFTTKEYHLRLNEDAAVGTSVVSVTAVDRDA---NNAISYQITGGNTRNRFAISTQG 798
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREI 94
+ +V + K++ Y +VL DR +
Sbjct: 799 GVG---LVTLALPLDYKQERYFKLVLTASDRAL 828
Score = 38.9 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS+ Y A V+E+ T+V+ + A D D N + Y++ G+ G+F ID+
Sbjct: 531 NAPQFSEKRYVAQVREDVRPHTVVLRVTATDQDKDA-NGLVHYNIISGNSRGHFAIDS-- 587
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I V+ LD E A Y L +RA D G PP
Sbjct: 588 ------------------LTGEIQVVAPLDFE-AEREYVLRIRAQDAGRPP 619
Score = 38.9 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG 48
+ P+F +Q +V EN P+G VI ++A DAD G N+++ YS+ G
Sbjct: 637 HTPIFVSTPFQVSVLENAPLGHSVIHIQAVDAD-HGENARLEYSLTG 682
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF Y ++ E++P+G+ V+ + A+D D G N++I+Y + D L F ID
Sbjct: 846 PVFQSAHYSVSMNEDRPVGSTVVVISASD-DDVGENARITYLLE--DNLPQFRID 897
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAPVF ++ VKEN +G++V + A D D G N+ I Y + G+ F +D
Sbjct: 1053 NAPVFPAEEFEVRVKENSIVGSVVAQITAVDPD-EGPNAHIMYQIVEGNIPELFQMD 1108
>gi|224046030|ref|XP_002187087.1| PREDICTED: cadherin-7 [Taeniopygia guttata]
Length = 785
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G N+++ Y + GDGLG F +
Sbjct: 258 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-VGPNAEMEYKIVDGDGLGVFKV---- 312
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+D T +E I + K LD E A Y L + A + PR
Sbjct: 313 ----------SVDKDT--QEGIITIQKELDFE-AKTSYTLRIEAANIHVDPR 351
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 24/111 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNEGP 62
PVF+ +Y V E +GT++ T+ A DP NS + YS+ R D YF ID
Sbjct: 375 PVFTSRLYSMVVSEAAKVGTIIGTVAA--HDPDASNSPVRYSIDRNTDLERYFNIDANSG 432
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I K LDRE + +N+T+ A++ P +
Sbjct: 433 V--------------------ITTAKSLDRETNAV-HNITVLAMESQNPAQ 462
>gi|449276788|gb|EMC85187.1| Cadherin EGF LAG seven-pass G-type receptor 3, partial [Columba
livia]
Length = 688
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 49/110 (44%), Gaps = 25/110 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF TV EN P GT V + A DAD G N + Y+++GG+ G ID G
Sbjct: 47 NSPVFGSISTTVTVLENAPAGTSVARVSATDAD-AGFNGVVVYTLKGGE--GRMDIDTSG 103
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I + K LDRE YNLT+ A D+G P
Sbjct: 104 L---------------------ISLEKELDREKQGF-YNLTVIASDQGQP 131
>gi|395535535|ref|XP_003769780.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2
[Sarcophilus harrisii]
Length = 2694
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F +QATV E+ P+G LV+ ++A DAD G N+++ Y + G FTI+N
Sbjct: 521 NAPIFVSTPFQATVLESVPLGYLVLHIQAIDAD-AGDNARLEYRLAGVGPDFPFTINN-- 577
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
GT I V LDRE Y+ + A D GTPP
Sbjct: 578 --------------GTGW----ISVAAELDREEVDF-YSFGVEARDHGTPP 609
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 53/177 (29%), Positives = 72/177 (40%), Gaps = 61/177 (34%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL------GYFT 56
AP F VYQATV ENQP+GT V +L+A D D G ++ Y++ D L +F+
Sbjct: 198 APQFQSPVYQATVPENQPVGTPVASLRAVDPD-EGEAGRLEYTM---DALFDSRSNQFFS 253
Query: 57 -------------IDNEGPLNH-FRIVPTKIDPGTKKKE----YNIVVLKLLD------- 91
+D E H FR+ T D GT ++ I V D
Sbjct: 254 LDPVTGAVTTAEELDRETKSTHVFRV--TAQDHGTPRRSALATLTITVTDTNDHNPVFEQ 311
Query: 92 -------REIAPLGYN-LTLRAVD----------------KGTPPRETYKATPRNGL 124
RE +GY LT+RA D G PP E ++ PR+G+
Sbjct: 312 SEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLVEGPGGPPPEVFEIDPRSGV 368
Score = 42.0 bits (97), Expect = 0.091, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 50/112 (44%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
NAP FS+ Y V+E+ G V+ + A D D G N+ + YS+ G+ G F +D +
Sbjct: 415 NAPQFSEKRYVVQVREDVTPGAPVLRVTATDRD-KGSNALVHYSIMSGNARGQFYLDAQT 473
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G L+ V+ LD E A Y L +RA D G PP
Sbjct: 474 GALD---------------------VVSPLDYETAK-EYTLRIRAQDGGRPP 503
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 19/109 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF Y+ +++EN +G V+T++A D D P N+ I Y + G G GP
Sbjct: 307 PVFEQSEYKESLRENLEVGYEVLTVRATDGDAPP-NANILYRLVEGPG---------GPP 356
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+IDP + I +DRE A Y LT+ A D+G P
Sbjct: 357 PEV----FEIDP----RSGVIRTRGPVDRE-AVESYQLTVEASDQGRDP 396
Score = 35.8 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVF + V+EN PIG V + A D D G N++I Y + G+ F +D
Sbjct: 908 NPPVFEQDEFDVFVEENSPIGLAVARVTATDPD-EGTNAQIMYQIVEGNIPEVFQLD 963
>gi|348586988|ref|XP_003479250.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like
[Cavia porcellus]
Length = 2925
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F +QATV E+ P+G LV+ ++A DAD G N+++ Y + G FTI+N
Sbjct: 504 NAPIFVSTPFQATVLESVPLGYLVLHVQAIDAD-AGDNARLEYRLAGVGHDFPFTINN-- 560
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
GT I V LDRE Y+ + A D GTPP
Sbjct: 561 --------------GTGW----ISVAAELDREEVDF-YSFGVEARDHGTPP 592
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
NAP FS+ Y V+E+ G ++ + A+D D G N+ + YS+ G+ G F +D +
Sbjct: 398 NAPQFSEKRYIVQVREDVAPGAPILRITASDRD-KGSNALVHYSIMSGNARGQFYLDAQT 456
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G L+ V + +D T K+ Y L +RA D G PP
Sbjct: 457 GALD----VVSPLDYETTKE------------------YTLRVRAQDGGRPP 486
Score = 38.9 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
AP F YQATV ENQP GT V +L+A D D G ++ Y++
Sbjct: 181 APQFQPPSYQATVPENQPAGTSVASLRAIDPD-EGEAGRLEYTM 223
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF Y V E++P GT V+ + A D D G N++I+Y + D + F ID
Sbjct: 713 PVFQSSHYTVNVNEDRPAGTTVVLISATDED-TGENARITYFME--DSIPQFRID 764
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 47/109 (43%), Gaps = 19/109 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF Y+ +++EN +G V+T++A D D P N+ I Y + G G GP
Sbjct: 290 PVFEQQEYKESLRENLEVGYEVLTVRATDGDAPP-NANILYRLLEGSG--------GGPS 340
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
F I P + I +DRE Y L + A D+G P
Sbjct: 341 EVFEIDP---------RSGVIRTRGPVDREEVE-SYKLIVEASDQGRDP 379
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVF + V+EN PIG V + A D D G N++I Y + G+ F +D
Sbjct: 920 NPPVFEQDEFDVFVEENSPIGLAVARVTATDPD-EGTNAQIMYQIVEGNIPEVFQLD 975
Score = 35.4 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR-GGDGLGYFTIDNE 60
NAP F YQ +V E+ P T V+ + A D D G+N ++ Y+ + G DG G F +++
Sbjct: 814 NAPQFLRDSYQGSVYEDVPPFTSVLQISATDRD-SGLNGRVFYTFQGGDDGDGDFIVEST 872
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ + L+ LDRE Y+L AVDKG PP T
Sbjct: 873 SGI--------------------VRTLRRLDRENVA-QYSLRAYAVDKGMPPART 906
>gi|324499461|gb|ADY39769.1| Cadherin-related tumor suppressor [Ascaris suum]
Length = 4485
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 53/114 (46%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF +Y EN P+ +++ + A D D G N ISYS+ IDN
Sbjct: 545 NAPVFEKDLYVIETAENTPLLSVITKVSAHDED-DGSNGLISYSI----------IDNS- 592
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
++ K+K IV+ ++LDRE Y LT+RA D G P R +
Sbjct: 593 ---------SRRTFAIKEKTGEIVLRRVLDREYQHR-YVLTIRASDNGYPRRSS 636
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 24/111 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI-DNE 60
N P+F +Y+A + EN TL++ + A D D +N + YS+ D F I +N
Sbjct: 2576 NRPIFDQILYEAEISENADSETLLLNVYAVDKD-ASVNGDVRYSILEEDMRALFRISENS 2634
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
G + F IVP D +K++ T++A D+G P
Sbjct: 2635 GEI--FTIVPLDADIISKRR--------------------FTVKAEDRGQP 2663
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+P FS +++A ++EN IG V + + D D M+S ++Y + DG+G F ID
Sbjct: 2681 NSPKFSH-LFRAEIEENSAIGAFVTQISSTDVD---MSSVVTYELE-DDGIGIFRID 2732
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 48/109 (44%), Gaps = 25/109 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F Y+A+++EN +V LKA D D G N+K+ YS
Sbjct: 2272 NDPIFELPYYRASIRENLRADEIVFQLKATDMD-AGENAKLRYS---------------- 2314
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKL-LDREIAPLGYNLTLRAVDKG 109
L +P +IDP + IV LDRE A L Y L + A D G
Sbjct: 2315 -LAEEEKIPFRIDP-----VHGIVYTTAPLDREAASLWY-LKVTAHDGG 2356
>gi|441596469|ref|XP_004092945.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin alpha-2 [Nomascus
leucogenys]
Length = 824
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 43/110 (39%), Positives = 54/110 (49%), Gaps = 19/110 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ VY+ + EN GTLV+ L A+DAD G NS+I YS+ G D TI +
Sbjct: 238 NEPTFAQSVYKVKLLENTANGTLVVKLNASDAD-EGSNSEIVYSL-GSDMSS--TIQTK- 292
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
F I P + TK K LD E A Y + + A DKGTP
Sbjct: 293 ----FTIDPISGEIRTKGK---------LDYEEAK-SYEIQVTATDKGTP 328
Score = 35.0 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 29/117 (24%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGL--GYFT 56
N P F+ Y VKEN P G + T+ A DAD N+ +SYS+ R G+ Y +
Sbjct: 451 NTPAFAQPEYTVFVKENNPPGCHIFTVSAWDADAQ-ENALVSYSLVERRVGERALSSYVS 509
Query: 57 IDNEG-------PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE--IAPLGYNLTLR 104
+ E PL+H +E ++ ++ R+ + PLG N+TL+
Sbjct: 510 VHAESGKVYALQPLDH--------------EELELLQFQVSARDAGVPPLGSNVTLQ 552
>gi|348507537|ref|XP_003441312.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2
[Oreochromis niloticus]
Length = 3017
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
N+P F Y + E+ P+ T V+ + A D D G+N ++ Y+ +GG DG G F I++
Sbjct: 889 NSPRFLRDHYVGAIMEDVPVFTSVVQVSATDRD-SGLNGRVFYTFQGGEDGDGDFIIEST 947
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ + L+ LDRE P+ Y L AVDKG P +T
Sbjct: 948 SGI--------------------VRTLRRLDRENVPI-YTLQAFAVDKGIPALKT 981
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F +QATV EN P+G +I ++A DAD G NS++ Y + F+I+N
Sbjct: 579 NAPIFVSTPFQATVLENVPLGYSIIHIQAVDAD-SGENSRLEYRLTETTPNFPFSINNST 637
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
IVV LDRE YN + A D G P
Sbjct: 638 GW--------------------IVVADELDRESVDF-YNFGVEARDHGYP 666
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 53/116 (45%), Gaps = 20/116 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F +YQ +V EN+P GT V+ LKA D D G ++ Y + D+
Sbjct: 259 PQFQPPMYQVSVAENKPAGTPVVVLKAVDVD-EGEAGRLEYFIEA-------LFDSRS-- 308
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
NH +DP + + +++LDRE + + AVD GT PR T AT
Sbjct: 309 NHL----FAVDPSSGA----VSTVEVLDRETKDT-HVFRVTAVDHGT-PRRTAMAT 354
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF Y ++ E++P+GT V+ + A D D G N++I+Y + D + F ID
Sbjct: 788 PVFQSSHYTVSINEDKPVGTTVVVISATDED-TGENARITYFM--DDSIPQFDID 839
Score = 38.5 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS+ Y V E+ T ++ + A D D G N+ + +S+ G+ G F ID +
Sbjct: 473 NAPQFSEKRYVVQVPEDMTPNTEILQVTATDQD-RGSNAVVHFSIMSGNTRGQFYIDAQ- 530
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+D ++ LD E A Y L +RA D G PP
Sbjct: 531 --------TGKMD-----------LVSHLDYE-ANKEYTLRIRAQDGGRPP 561
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVF + V+EN PIG +V + A D D G N++I Y + G+ F +D
Sbjct: 995 NPPVFEKDEFDIMVEENSPIGLVVAHISATDPD-EGSNAQIMYQIVEGNIPEVFQLD 1050
>gi|327270419|ref|XP_003219987.1| PREDICTED: protocadherin gamma-A6-like [Anolis carolinensis]
Length = 818
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
NAP+F+ +Y+ TVKEN P G+ V T+ A D D G+N ++ YS+R
Sbjct: 240 NAPIFNQPIYEVTVKENIPKGSTVATVSATDLD-EGLNGEVKYSLR 284
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP + +++ E+ P GT++ L D D G+N +++ SV N
Sbjct: 345 NAPELIVNYFTSSISESSPAGTVIAILNVQDQD-SGVNGEVTCSV-----------PNNL 392
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
P FR+ + D Y++V LDRE P +N+T+ D G PP T
Sbjct: 393 P---FRLERSVDD------FYSLVTAGTLDREHMPT-FNITITGTDNGIPPLST 436
>gi|149017320|gb|EDL76371.1| rCG49295, isoform CRA_g [Rattus norvegicus]
Length = 868
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
NAPVF+ Y +VKEN P+GT ++T+KA+D D G N +++YS R
Sbjct: 237 NAPVFTQPEYHISVKENLPVGTRLLTVKASDPD-EGANGEVTYSFR 281
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 24/117 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP + ++++E P GT++ D+D G +GL +I +
Sbjct: 342 NAPEVTVTSLTSSIQETSPPGTVIALFNVHDSD------------SGENGLVTCSIPDNL 389
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP--RETY 116
P FR+ T + +++ + LDRE YN+T+ A D+GTPP ETY
Sbjct: 390 P---FRL------EKTYGNYHQLLIHRTLDREEVS-DYNITITATDQGTPPLSTETY 436
>gi|395510895|ref|XP_003759703.1| PREDICTED: cadherin-20 [Sarcophilus harrisii]
Length = 630
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 16/128 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P F D Y ATV E P+GT VI + A DAD P G ++++ YS+ G YF++D+
Sbjct: 161 NEPKFLDGPYVATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQ--PYFSVDS 218
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR--EIAPLG----YNLTLRAVDKGTP-- 111
+ + R +D + KEY V+++ D ++ L N+TL V+ P
Sbjct: 219 KTGV--IRTALMNMD--REAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVNDNPPRF 274
Query: 112 PRETYKAT 119
P++ Y+ +
Sbjct: 275 PQKHYQMS 282
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F YQ +V E+ P+ + V + A D D G+N+++ Y++ GDGL F I+ +
Sbjct: 270 NPPRFPQKHYQMSVLESAPVSSTVGRVFAKDLDE-GINAEMKYTIVDGDGLDTFDINTD 327
>gi|170064482|ref|XP_001867543.1| neural-cadherin [Culex quinquefasciatus]
gi|167881873|gb|EDS45256.1| neural-cadherin [Culex quinquefasciatus]
Length = 3396
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 21/111 (18%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG--DGLGYFTIDNE 60
APVF + Y A+V E+ P+GT V+ + A+D D G+N++I+YS+ G +GLG NE
Sbjct: 867 APVFENAPYTASVFEDAPVGTTVLMVFASDND-VGLNAQITYSLNEGSSNGLG----SNE 921
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P + T IV LDRE + LT+ A D G P
Sbjct: 922 ---------PFSVHVQTGA----IVTTAALDRETTST-FLLTVTAKDSGNP 958
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P+F+ Y+A++ E+QP GT V T+ A D D +S++ Y + G+ G F+I ++
Sbjct: 763 NDPIFNPKYYEASIAEDQPPGTPVTTVTATDLDE---DSRLHYEITSGNTRGRFSITSQ 818
Score = 42.4 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 13/118 (11%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F + A V+E +G+ VIT++A D D G N +I YS+ G +N
Sbjct: 434 HTPAFESEEFHANVREGTSVGSSVITIRATDQD-IGKNGEIEYSIASVSGDNVTVGENAD 492
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
N FRI + + I LDREI+ + Y + + A D P E T
Sbjct: 493 --NLFRI---------EARTGTITTRGALDREISEM-YVIQVMATDMAIPQSERKSTT 538
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT-IDNEGP 62
P F+ V EN P+G+ + + A D D G+N+ + YS+ GGD L F+ + G
Sbjct: 1084 PTFASDKLTMYVPENSPVGSAIGEIYAHDPDE-GVNAIVHYSIIGGDDLNAFSLVTRPGS 1142
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVV 86
+ T++D + KK + +VV
Sbjct: 1143 ERAQLLTMTELDFESNKKRFELVV 1166
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 23/111 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDNE 60
N+P F +YQAT+ E+ IGT V+ + A D D G+N ++ + + D G F
Sbjct: 976 NSPQFDVPLYQATIAEDAFIGTSVLQISATD-DDMGLNGRVKFMLSSKDVEDGSFV---- 1030
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
IDP + N K LDRE + Y+L A D+GTP
Sbjct: 1031 ------------IDPSSGVIRTN----KGLDRESIAV-YHLIAIAADRGTP 1064
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 24/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIG--TLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P FS+ Y V E+Q ++ ++A DAD G N+ + Y++ GG+ F++D+
Sbjct: 551 NYPQFSERTYTVHVSEDQWTNENNVIAQIRATDADK-GNNAAVRYAIIGGNTQSQFSMDS 609
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+++++K LD E + Y L +RA D G+P R
Sbjct: 610 ISG--------------------DVLLVKPLDYE-SIRSYRLVIRAQDGGSPSR 642
Score = 39.3 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F +Q V E+ P+G ++ ++A D+D G+NS+ISY ++ D ID+
Sbjct: 658 NAPRFYTTQFQEAVLESVPVGYNIVRVQAYDSD-EGVNSEISYRIQDRDENSPLAIDSRT 716
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
H LDRE Y + A+D G PP+
Sbjct: 717 GWIH--------------------TTSPLDRE-EKSRYVFQVVAIDGGIPPK 747
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 22/124 (17%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F +Y + +E QP GT + T++A D + +S +SY++ ++ +
Sbjct: 330 SPYFEQALYVVSAQEEQPAGTEITTVRARDPE----HSVVSYTM--------VSLLDSRS 377
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPRN 122
+ F+I K + + +LDRE+ + Y + A D PPR N
Sbjct: 378 QSMFQI---------NTKSGTVKTVAILDREVMDVHY-FRIIATDDSFPPRSGTSTLQVN 427
Query: 123 GLTC 126
L C
Sbjct: 428 VLDC 431
>gi|127139358|ref|NP_001076029.1| protocadherin gamma-A4 [Pan troglodytes]
Length = 962
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
NAPVF+ Y +V EN P+GTL++T+KA D D G N ++YS R
Sbjct: 269 NAPVFTQPEYHVSVHENVPVGTLLLTVKATDPD-EGANGDVTYSFR 313
>gi|392334146|ref|XP_003753091.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-A4 [Rattus
norvegicus]
gi|392354653|ref|XP_003751817.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-A4 [Rattus
norvegicus]
Length = 848
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
NAPVF+ Y +VKEN P+GT ++T+KA+D D G N +++YS R
Sbjct: 237 NAPVFTQPEYHISVKENLPVGTRLLTVKASDPD-EGANGEVTYSFR 281
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 24/117 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP + ++++E P GT++ D+D G +GL +I +
Sbjct: 342 NAPEVTVTSLTSSIQETSPPGTVIALFNVHDSD------------SGENGLVTCSIPDNL 389
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP--RETY 116
P FR+ T + +++ + LDRE YN+T+ A D+GTPP ETY
Sbjct: 390 P---FRL------EKTYGNYHQLLIHRTLDREEVS-DYNITITATDQGTPPLSTETY 436
>gi|198433098|ref|XP_002120736.1| PREDICTED: similar to FAT tumor suppressor 1 [Ciona intestinalis]
Length = 4828
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 22/102 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
+ E++PIGT+V ++A D D G N K+ Y++ G+G F I+ + +
Sbjct: 651 IPEDKPIGTVVTKVQAVDRD-NGFNGKLWYTITSGNGDSCFNINTQTGV----------- 698
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
I ++KLLDRE YNLT+ D G+P + +
Sbjct: 699 ---------ISIVKLLDRERTSR-YNLTVSVSDMGSPTKTAF 730
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 23/108 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+F+D Y+ + E+ P G+ VI + A D D G N I Y++ G F ID P+
Sbjct: 389 PLFTDSTYKVVIPESLPAGSFVIQVHAEDRD-AGNNGSILYTLVGNP--SEFKID---PI 442
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
N GT I+ K LD ++ Y L +RA D GTP
Sbjct: 443 N-----------GT------ILTTKKLDYDLMRSSYKLRVRATDSGTP 473
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F Y +E+ +G +V+ + A D G N+K+ YS+ G+ G F I+ +
Sbjct: 3223 NPPIFDLNQYNTEFREDASVGLVVLQVSAHSIDS-GANAKLRYSITHGNEHGKFVINQDS 3281
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLR 104
R++ T +D + + ++ + DR PL T+R
Sbjct: 3282 --GEIRLIAT-VD--YESDQSYVLTISAADRSSNPLSSECTVR 3319
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 45/112 (40%), Gaps = 21/112 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++AP F+ + V E+ IG V A D D + I YS+ G GLG F ID
Sbjct: 959 LHAPYFNLPEDKFEVLESAEIGKTVGIASAVDDDIGEPENSIGYSIVDGTGLGIFAIDEN 1018
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I + LDRE Y LT++A D+G P
Sbjct: 1019 TGI--------------------ITTSRQLDRETERF-YWLTIKATDRGAIP 1049
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADAD-PPGMNSKISYSV 46
PVF VY+ T+ EN +GT+V + A D D P N + Y +
Sbjct: 1387 PVFDQAVYEHTISENTTVGTMVFQVTATDGDIEPRQNGNLIYRI 1430
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 25/108 (23%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG---DGLGYFTIDN 59
+P F Y+ ++ E P G V+ + A D D G K +YS++ + +F+ID
Sbjct: 2801 SPTFMSSNYEVSITEGLPAGQNVVQVHAVDKD-NGEFGKFTYSIKSSPTNNNTDFFSIDP 2859
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
+ L I L LDREI P Y LT++A+D
Sbjct: 2860 KTGL--------------------IQSLLPLDREIKPF-YTLTVQAID 2886
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 21/116 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG------DGLGYF 55
N P F V++ V E+ P+GT+V L++ D D P +S++ YS+ G G F
Sbjct: 849 NPPRFHQDVFRIKVTEDLPVGTVVFRLQSYDPDMP-EHSEVRYSLTAGMSDHQRRGEPKF 907
Query: 56 TIDNEGPLNHFRIVPTKIDPGTKKKEYNI----------VVLKLLDREIAPLGYNL 101
+D P + + K+D K + YNI V ++ EI P+ NL
Sbjct: 908 NVD---PRTGYIRISAKLDYRVKTR-YNITARARDRVYRVATCYIEVEILPVNRNL 959
>gi|12652559|gb|AAH00019.1| CDH6 protein [Homo sapiens]
gi|119631170|gb|EAX10765.1| cadherin 6, type 2, K-cadherin (fetal kidney), isoform CRA_c [Homo
sapiens]
Length = 663
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P+F+ VY ATV E +GT V+ + A DAD P G ++K+ YS+ G YF++++
Sbjct: 155 NEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQ--PYFSVES 212
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTP--PR 113
E + + +D +++ ++ K + ++ L N+TL V+ P P+
Sbjct: 213 ETGI--IKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQ 270
Query: 114 ETYK 117
TY+
Sbjct: 271 STYQ 274
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ E+ P GT + +KA+DAD G N++I YS+ G+GL F + +
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDAD-VGENAEIEYSITDGEGLDMFDVITDQ 322
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
I K+ KKK Y + V
Sbjct: 323 ETQEGIITVKKLLDFEKKKVYTLKV 347
>gi|426254115|ref|XP_004020730.1| PREDICTED: cadherin-20 [Ovis aries]
Length = 693
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 16/128 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P F D Y ATV E P+GT VI + A DAD P G ++++ YSV G YF++D+
Sbjct: 161 NEPKFLDGPYVATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSVL--QGQPYFSVDS 218
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR--EIAPLG----YNLTLRAVDKGTP-- 111
+ + R T +D + KEY V+++ D ++ L N+TL V+ P
Sbjct: 219 KTGV--IRTALTNMD--REAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVNDNPPRF 274
Query: 112 PRETYKAT 119
P++ Y+ +
Sbjct: 275 PQKHYQMS 282
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ +V E+ P+ + V + A D D G+N+++ Y++ GDG F I+ +
Sbjct: 270 NPPRFPQKHYQMSVLESAPVSSTVGRVFAKDLDE-GINAEMKYTIVDGDGADAFDINTDP 328
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
I K +KK Y + V
Sbjct: 329 NFQVGIITVKKPLSFERKKSYTLKV 353
>gi|348514391|ref|XP_003444724.1| PREDICTED: protocadherin gamma-A11-like [Oreochromis niloticus]
Length = 684
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG--GDGLGYFTIDN 59
NAPVF+ +Y+A+++EN +GT V+ + A DAD G N +I+YS+ G F ++
Sbjct: 228 NAPVFTQPIYKASIRENSAVGTTVMRVTATDAD-HGSNGRITYSISSILDSARGLFEVNG 286
Query: 60 E 60
E
Sbjct: 287 E 287
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 14/123 (11%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY-----SVRGGDGLGYFT 56
NAPVF A V EN G ++T+KA+D D G N++ISY + G YF+
Sbjct: 438 NAPVFEQQFLTAFVNENNSPGMSLLTVKASDMD-YGSNARISYFLEDSQLNGMSASAYFS 496
Query: 57 IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV---DKGTPPR 113
++ E IV + + KE++I V K D PL N+T++ + PP+
Sbjct: 497 VNVE----RGEIVAVRSFDYEQTKEFHIRV-KAQDGGSPPLCSNVTVKIMIQDQNDNPPQ 551
Query: 114 ETY 116
Y
Sbjct: 552 VLY 554
>gi|410925624|ref|XP_003976280.1| PREDICTED: protocadherin alpha-3-like [Takifugu rubripes]
Length = 812
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 19/115 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF +Y+AT+ EN P G VIT+ A D D G+N ++ YS + DN+
Sbjct: 237 NIPVFDKSLYKATIAENTPYGASVITVHARDLD-EGLNGEVIYS--------FINHDNDN 287
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++ F I+P T + I V LD E + + ++A DKG PR ++
Sbjct: 288 DIDKF-----DINPLTGE----ITVKGELDHEKSS-AVEIRVQAKDKGPFPRASH 332
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 26/100 (26%)
Query: 15 VKENQPIGTLV--ITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
VKE+ P T+V IT++ DAD G VR D VP K
Sbjct: 358 VKEDAPQETMVGLITVRDNDADRNG-----RVQVRLVD-----------------TVPFK 395
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I T K Y++VV LDRE+A YN+T+ A D+G PP
Sbjct: 396 I-KNTYKNHYSLVVDGSLDREVAS-EYNITIAATDEGLPP 433
>gi|167536805|ref|XP_001750073.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771402|gb|EDQ85069.1| predicted protein [Monosiga brevicollis MX1]
Length = 10110
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ ++ + E P GT V++L A DAD G N++I YS+ GD F +DNE
Sbjct: 3067 NAPAFAQRRFETDLSEAAP-GTNVLSLVATDADA-GQNAEIVYSISSGDPNNDFALDNET 3124
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
L + +L+ A YNL + A D+G P + T
Sbjct: 3125 GL--------------------LTTARLICLSDAIEAYNLVVAAADRGIPSQRT 3158
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 55/113 (48%), Gaps = 9/113 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N+PVF Y + E+ P + V+ + A DAD G+N+++SY + G L T N
Sbjct: 5628 NSPVFVRPTYSTAIAESAPENSPVLQVSATDAD-VGLNARLSYELAGSTML--LTATNAV 5684
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P ++ +P I+ T + I V LDRE Y+L A D GTP R
Sbjct: 5685 VPFDNASTLPFAINASTGQ----ITVTAALDRETVSR-YDLVALARDAGTPQR 5732
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 24/111 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
NAPVFS Y AT E Q +GT ++TL A+D D G+ +++ G+G G F ++
Sbjct: 5106 NAPVFSRTTYTATFAETQSVGTTLLTLAASDRD-SGIRGMFDFALISGNGDGRFDLNATT 5164
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
G L+ +L LDRE A Y L + D+GTP
Sbjct: 5165 GELS---------------------LLLPLDRENAS-SYTLGVAVTDRGTP 5193
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGM-NSKISYSVRGGDGLGYFTID 58
N PV Y + EN +GTL++ L A DAD PG NS+I+Y++ G+ F +D
Sbjct: 5420 NHPVLQSTEYSIVLPENAAVGTLILQLNATDADEPGQPNSQIAYALIDGNTENLFALD 5477
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 34/106 (32%), Positives = 43/106 (40%), Gaps = 23/106 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y +V E+ I T V + A + D I YS+R G+ G F ID
Sbjct: 5527 NPPEFDSASYTGSVAEDAAINTTVTQVSATNPDVSA--DPIKYSIRAGNAAGRFAID--- 5581
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
I V ++LDRE P GY LT+RA D
Sbjct: 5582 -----------------ATTGEIRVAQVLDRETTP-GYVLTVRADD 5609
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 47/114 (41%), Gaps = 25/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y T+ EN GT T++A DAD +N+ ++Y++ G
Sbjct: 951 NAPEFRADTYSCTIAENSVAGTFCQTVQADDADR--VNNDVTYTLSNTQG---------- 998
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
FRI I LDRE A Y+L AVD G PPR T
Sbjct: 999 ---RFRI---------NHLTGRIETTAPLDRE-AQASYSLVATAVDSGIPPRFT 1039
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 28/55 (50%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
P F+ + TV E PIGT+V L A D D PG + + GG+ G F +D
Sbjct: 4692 PTFTAPLVSVTVDETIPIGTVVAQLTARDEDEPGTIVPEEFRLVGGNAPGLFAVD 4746
Score = 38.5 bits (88), Expect = 0.96, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDNEGP 62
P FS +Y+ ++ E++P+G+LV TL A DAD ++ ++Y++ G+ GL + G
Sbjct: 4091 PRFSQGIYEMSILESRPVGSLVGTLAAEDAD----STSLTYTILSGNSGLTFALSATSGN 4146
Query: 63 LNHFRIVPTKIDPGT 77
L V + DPG+
Sbjct: 4147 LTLRNTVCAR-DPGS 4160
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 45/112 (40%), Gaps = 26/112 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+ + +Y +V E P ++V T+ A DAD + +SYS
Sbjct: 228 NAPILNPTLYNVSVSEATPANSIVATVVATDAD---RHDTVSYS---------------- 268
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
IV T I + + LD E + YN ++R D GTP R
Sbjct: 269 ------IVDTNIPFSIGSSSGQLRLATALDYETLQM-YNFSVRVTDSGTPSR 313
Score = 35.4 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 16/110 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F + +V EN GT+++TL+ DAD G S +++S+ GG+
Sbjct: 1053 NPPQFVTKSFTRSVPENAAGGTVLVTLEVTDAD-VGDASAVAFSINGGE----------- 1100
Query: 62 PLNHFRIVPTKIDPGTK-KKEYNIVVLKLLDREIAPLGYNLTLRAVDKGT 110
+ F ++ T PG I LD E A Y + + A++ GT
Sbjct: 1101 --DQFEVITTTTTPGNAGTARLRIKNTATLDYE-AVRNYTVRVTALNPGT 1147
Score = 35.4 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
PVF+ + +A++ EN V T+ A DAD + +SYS+ G+ G F ID +G
Sbjct: 3276 PVFAVNLTRASIVENVATAETVATVVATDADDCS-SCMLSYSITAGNAGGTFAIDEQG 3332
Score = 35.4 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP+F D Y A + E IGT V+ + A DAD + +S+S+
Sbjct: 850 NAPLFVDAPYSANISEATSIGTAVLAVAATDAD---LEQTLSFSI 891
Score = 35.4 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
+APVF + Y+ V EN +G++V+ + A D D G +++++YS+
Sbjct: 7456 HAPVFENATYEVAVYENLTVGSIVLRVAATDQD-VGRSAQLTYSI 7499
>gi|410913739|ref|XP_003970346.1| PREDICTED: protocadherin alpha-3-like [Takifugu rubripes]
Length = 812
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 19/115 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF +Y+AT+ EN P G VIT+ A D D G+N ++ YS + DN+
Sbjct: 237 NIPVFDKSLYKATIAENTPYGASVITVHARDLD-EGLNGEVIYS--------FINHDNDN 287
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++ F I+P T + I V LD E + + ++A DKG PR ++
Sbjct: 288 DIDKF-----DINPLTGE----ITVKGELDHEKSS-AVEIRVQAKDKGPFPRASH 332
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 26/100 (26%)
Query: 15 VKENQPIGTLV--ITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
VKE+ P T+V IT++ DAD G VR D VP K
Sbjct: 358 VKEDAPQETMVGLITVRDNDADRNG-----RVQVRLVD-----------------TVPFK 395
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I T K Y++VV LDRE+A YN+T+ A D+G PP
Sbjct: 396 I-KNTYKNHYSLVVDGSLDREVAS-EYNITIAATDEGLPP 433
>gi|61806606|ref|NP_001013538.1| cadherin-6 precursor [Danio rerio]
gi|54306049|dbj|BAD66654.1| cadherin 6 [Danio rerio]
Length = 794
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F +YQ +V E +G+ V ++A DAD G N+++SYS+ GGD L F I +
Sbjct: 261 NAPHFKQGIYQFSVPELTKVGSSVGRIEAEDAD-IGRNAEMSYSITGGDSLDVFDISTDR 319
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGT 110
+ K KKK Y L++ + P + ++ DK T
Sbjct: 320 NTQEGILTVKKPLDYEKKKSY---TLQIEVKNTHPYSHYMSQDTKDKAT 365
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P F VY A+V E IGT V + A DAD G ++K++YS++ +G YF+++
Sbjct: 150 NEPKFDKEVYTASVPEGSHIGTFVTQVTAQDADDEMFGYSAKLAYSIK--EGHPYFSVEP 207
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVV 86
+ + PT +D +++ Y +V+
Sbjct: 208 NTGIIRTALGPTDMDR-EQREHYQVVI 233
>gi|355785087|gb|EHH65938.1| hypothetical protein EGM_02811, partial [Macaca fascicularis]
Length = 988
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F +QATV EN P+G V+ ++A DAD G N+++ Y + + + G
Sbjct: 184 NEPIFVSSPFQATVLENVPLGYPVVHIQAVDAD-SGENARLHYRLV-DTASAFLGGGSAG 241
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P N PT P +V LDRE Y+ + AVD G+PP
Sbjct: 242 PKNP---APTPDFPFQIHNSSGWIVCAELDREEVE-HYSFGVEAVDHGSPP 288
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 24/110 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF Y +V E++P+GT + TL A D D G N++I+Y + + P+
Sbjct: 406 PVFQSSHYTVSVSEDRPVGTSIATLSANDED-TGENARITYVI-------------QDPV 451
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
FRI P D GT + + LD E + Y LT+ A D G P +
Sbjct: 452 PQFRIDP---DSGT------MYTMMELDYE-NQVAYTLTIMAQDNGIPQK 491
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP+F + V+EN P+G++V ++A D D G N++I Y + GD +F +D
Sbjct: 614 NAPMFEKDELELFVEENNPVGSVVAKIRANDPD-EGPNAQIMYQIVEGDMRHFFQLD 669
Score = 39.3 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG 49
++PVF Y+ V+EN +G V+T++A+D D P +N+ + Y V GG
Sbjct: 14 HSPVFEQSEYRERVRENLEVGYEVLTIRASDRDSP-VNANLRYRVLGG 60
Score = 38.5 bits (88), Expect = 0.84, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N PVF+ Y+ + E+ +G+ V+TL+A D D NS I+Y + GG+ F + ++
Sbjct: 305 NDPVFTQPTYELRLNEDAAVGSSVLTLQARDRDA---NSVITYQLTGGNTRNRFALSSQ 360
>gi|292621593|ref|XP_002664697.1| PREDICTED: protocadherin-16-like [Danio rerio]
Length = 3237
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 46/108 (42%), Gaps = 18/108 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y A++KEN P T + + A DAD S ISYS+ G G
Sbjct: 533 NEPVFGSKFYNASIKENAPARTCFMEVTATDADGGSFGS-ISYSLGSGQG---------- 581
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ P++ K I LDR+ P Y+ T+ AVD G
Sbjct: 582 -----SVTPSQFT--VDKHNGQICTTTSLDRDQGPANYDFTVTAVDGG 622
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF Y+A+V E++ G+ ++TL+AAD D N +++ G+ F I++
Sbjct: 2428 NAPVFHQTEYRASVSEDEVPGSTILTLEAADGDLSRDNCGFDFAIASGNIGNTFQIESS- 2486
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVL-KLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ G + +++L LD EIA YNLT+ D+G P R +
Sbjct: 2487 ---------VRFLEGHGFQTVGMLILADKLDFEIAS-SYNLTIVVSDRGIPQRSS 2531
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 23/111 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS +Y+ T+ E+ P G+ VIT+ A D D G N +I+Y V + F ID
Sbjct: 2324 NAPVFSQDLYEVTLAEHSPAGSSVITVTATDKD-SGENGRITYRVVSTKDM--FYID--- 2377
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P N + +++ +++ +V+ A D GTPP
Sbjct: 2378 PSNGTLFIKKEVEFDSQRPSILVVI-----------------EASDSGTPP 2411
Score = 43.9 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF +V E+QP+G +V+ + A DAD G N +++Y ++ G+ G F+
Sbjct: 1497 NEPVFIS-ASVVSVMEDQPVGFVVVYVMAVDAD-QGENGRVTYRIQSGNVRGKFS----- 1549
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I+P T ++ +L+ +DRE L YNLT+ A D G R +
Sbjct: 1550 -----------INPDTG----SLSILRPIDREEEDL-YNLTIVAEDHGLQQRSS 1587
Score = 42.7 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 48/110 (43%), Gaps = 25/110 (22%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP F + Y+A + ENQP G+ V+ + A+D D G N ++Y GD
Sbjct: 1602 APYFQESQYEAFIAENQPAGSTVLVVSASDMD-QGTNGIVTYGSIVGDDF---------- 1650
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I P T I K LDRE + Y LT+ A D G+PP
Sbjct: 1651 ---------SIHPVTGV----ITTTKALDREAQGV-YALTVYARDGGSPP 1686
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 48/110 (43%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y A V+E Q +I + A D D G N +++YS+R G F
Sbjct: 2119 NLPRFQLHNYVAYVREAQGYDHPIIQVLANDLDQ-GQNGQVTYSIRSSSMSGLF------ 2171
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
KIDP T +I ++DREI NL + A D+G+P
Sbjct: 2172 ----------KIDPITG----SISTAAIMDREIWT-QTNLVIMATDRGSP 2206
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 9/69 (13%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG-- 61
PVF Y V E+ GT V ++A+ + G+ ISY + GD GYFT+D+E
Sbjct: 747 PVFEQAQYYFVVSEDALRGTQVGVVRASTKN--GVLKDISYIISSGDPTGYFTVDSETGA 804
Query: 62 -----PLNH 65
PL+H
Sbjct: 805 LRTSLPLDH 813
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P FS Y A V E GT ++ L A D D N ++ YS+ GD FT+D
Sbjct: 2545 NPPSFSRAEYSAVVNEGAERGTEILQLFAIDPDSTP-NGEVQYSISSGDDSELFTVD 2600
Score = 35.4 bits (80), Expect = 8.0, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 47/112 (41%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ V+EN P GT + A+D D G+N ++SY + D
Sbjct: 1067 NTPRFTQERAFLAVRENLPAGTGFGRVSASDRD-AGLNGRLSYRLLHLD----------- 1114
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
HF+I + TK LDRE+ Y L + A D GTPPR
Sbjct: 1115 --RHFQINSHTGEISTKLS---------LDRELQS-SYQLIVVAQDGGTPPR 1154
>gi|403272515|ref|XP_003928104.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23-like [Saimiri
boliviensis boliviensis]
Length = 2899
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 22/109 (20%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
APVF +Y+A+VKENQ G VI ++A D D G+NSK+ + + G F I++
Sbjct: 1250 APVFKQQLYEASVKENQNPGEFVIRVEALDRD-SGVNSKLQFEIMPGASFELFQINS--- 1305
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
D G +V +LDRE+ + + L + D G P
Sbjct: 1306 -----------DSG------EVVTTTMLDREVQEV-FTLRVLVRDGGVP 1336
Score = 42.7 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 51/108 (47%), Gaps = 20/108 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F D + +V+EN PIGTLV A D D +NS+I Y Y N G
Sbjct: 1035 HSPSFQDELIVISVEENVPIGTLVYIFNAKDGDGSFLNSRIQY---------YIESHNPG 1085
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+N F I P+ GT +V + LDRE P LT+ A D+
Sbjct: 1086 -MNPFLIHPSF---GT------LVTVSPLDRESLPT-VTLTVTASDQA 1122
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F +YQA+V E Q +I + A D D G+N I YS+ G+ F ID
Sbjct: 1767 NSPCFEQSIYQASVSEGQFYNASIIQVFATDLD-SGLNGLIEYSILSGNQEEAFQIDALS 1825
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
++ T + +LD E+ Y+L ++A DKG P
Sbjct: 1826 G-----VITTNV---------------ILDYELTS-SYSLIVQATDKGMP 1854
Score = 38.5 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI-DNE 60
N P FS Y VKE+ P+G+ + + A D D G +++I Y + G+ G+F + +N
Sbjct: 2190 NPPNFSSLSYHTHVKESTPLGSHITVVSANDRD-TGSHAEIIYHIISGNEKGHFYLEENT 2248
Query: 61 G------PLNH-----FRIVPTKIDPGTKKKEYNIVVLKLLD 91
G PL++ F + D K + +V + +LD
Sbjct: 2249 GVLYLIKPLDYEEMTKFTLTVQASDAEKKHFSFAVVFVNVLD 2290
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 41/99 (41%), Gaps = 24/99 (24%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NEGPLNHFRIVPTKI 73
V E QP+ LV T+ A D D G N+++ YSV D +F ID N G + I+
Sbjct: 836 VLEGQPVNMLVTTVFAKDPD-EGNNAEVLYSVSSEDSSDHFKIDANSGEIRTTTILSYDY 894
Query: 74 DPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P Y +T+ A D+G PP
Sbjct: 895 RP----------------------SYRMTVMATDQGVPP 911
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N PVFS YQ TV E+ P+G V+T+ A D + N+ ISY +
Sbjct: 1972 NLPVFSQEFYQVTVPESIPVGYSVLTVSATDLEN---NANISYRI 2013
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++P F YQ++V+E+ +GT+V+ L A D D G+N + Y + + G FT+D
Sbjct: 1458 HSPSFPTPYYQSSVREDAEVGTVVLMLSAVDKD-EGLNGQTEYLLT-DEASGAFTMD 1512
Score = 35.4 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 11/111 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y ++ E+ IG+ ++T D D N+ + YS+ G+ F ++
Sbjct: 2074 HAPEFTVKSYNLSLSEDALIGSTLVTFSNIDHDWTPENTYVEYSIISGNLQNNFHVETNF 2133
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ + K+ +V+L LDRE A + + + A D G PP
Sbjct: 2134 IHSEY----------PYKQVAYLVLLHSLDRE-ASASHEIAILASDSGCPP 2173
>gi|341877402|gb|EGT33337.1| hypothetical protein CAEBREN_30872 [Caenorhabditis brenneri]
Length = 2606
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y + EN PIG+ V T+ A DAD G NS IS+ + GG F I+ +
Sbjct: 910 NAPAFEQLSYDLYIAENAPIGSTVGTIVARDAD-EGDNSDISFRIFGGADAKLFDIEEDA 968
Query: 62 PLN 64
N
Sbjct: 969 EQN 971
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P+F Y ++E+ PIGT V+++ A D D G N +I YS+ G+G I+++
Sbjct: 261 NSPIFEKDSYFGEIREDAPIGTTVLSVFARDLD-SGENGEIEYSLGEGNGKSLLAINSKS 319
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I LDRE L L + A DKG P RE+
Sbjct: 320 GV--------------------IQTAAPLDRETLSL-IRLDVIASDKGVPKRES 352
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAPVF+ Y T+ EN + ++ T+KA D D G N K+ YS+ G+G TID
Sbjct: 366 NAPVFASDSYNVTILENITLPAVIATVKATDED-FGTNGKVHYSMASSSGIGGLTID 421
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 25/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+D ++ + E+ PIG VITLKA D D G N+++ YS+ D +F ID+
Sbjct: 688 SAPYFTDHLFSVKIPEHSPIGFPVITLKAEDHD-RGDNARLIYSI---DSTQFFKIDSAS 743
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+I V LDRE +++ + A D +PP T
Sbjct: 744 G--------------------DISVAADLDREDRAT-FSVIVTASDHASPPLNT 776
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
NAP+F Y T+ E P G+ +ITLKA D D + KI+Y + D
Sbjct: 587 NAPIFDKKEYNVTISEEMPRGSQIITLKAVDNDE---DQKITYRIEEAD 632
>gi|47221177|emb|CAG05498.1| unnamed protein product [Tetraodon nigroviridis]
Length = 771
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N P FS YQ TV E+ P+ ++V +KAADAD G N+++ Y + DGLG F +
Sbjct: 199 NPPRFSHKNYQYTVLESLPVRSVVAKIKAADAD-IGSNAEMDYRIMDSDGLGVFNV 253
>gi|313245856|emb|CBY34844.1| unnamed protein product [Oikopleura dioica]
Length = 937
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF + +VKEN+PIGT + L A DAD +N +I YS + +FTID+
Sbjct: 550 NAPVFENPSSTISVKENKPIGTFITQLTATDAD---LNDEIKYSFK--TKTSFFTIDS 602
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 45/110 (40%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F VY + EN IG ++ + A D D G N++ISY + L F ID E
Sbjct: 446 NAPSFKHDVYNGEIAENNEIGDTIVQITAFDPD-FGKNAEISYEISEHKNL--FVIDPET 502
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
++ L D E+ P ++ + A D G+P
Sbjct: 503 A--------------------DLKALVSFDAELFPDPISINIIATDNGSP 532
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 20/107 (18%)
Query: 12 QATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPT 71
+A V E+ P+G+ V + D D G ++S + G NHF++V
Sbjct: 349 RAAVSEDLPVGSFVAYVSVTD-DDLGPAGEVSLVLEGS--------------NHFKLVSV 393
Query: 72 KIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
+ GT + + + V LDREI Y LTL A D GT +ET K+
Sbjct: 394 E---GTSDR-FMLTVAAPLDREIKE-EYVLTLIARDNGTSAQETLKS 435
>gi|62510869|sp|Q5DRB6.1|PCDG4_PANTR RecName: Full=Protocadherin gamma-A4; Short=PCDH-gamma-A4; Flags:
Precursor
Length = 931
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
NAPVF+ Y +V EN P+GTL++T+KA D D G N ++YS R
Sbjct: 238 NAPVFTQPEYHVSVHENVPVGTLLLTVKATDPD-EGANGDVTYSFR 282
>gi|292620529|ref|XP_002664328.1| PREDICTED: protocadherin gamma-A11-like [Danio rerio]
Length = 808
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLG---YFTID 58
NAPVFS VY+ ++ EN P+ T+V+T+ A DAD G N +++Y G+ ++ +
Sbjct: 241 NAPVFSQAVYKVSLPENSPVDTVVVTVSATDAD-EGQNGEVTYEFSRISGIAKELFYLNE 299
Query: 59 NEGPL 63
N G +
Sbjct: 300 NSGEI 304
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 48 GGDGLGYFTIDNEGPLNHFRI-VPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
G +G+ ++I+ NHF + V TK D G K +V+ K LDRE L L AV
Sbjct: 166 GQNGVQTYSIERN---NHFILSVSTKADGG---KNVELVLDKELDRE-QQKEVTLILTAV 218
Query: 107 DKGTPPR 113
D GTPPR
Sbjct: 219 DGGTPPR 225
>gi|403270571|ref|XP_003927248.1| PREDICTED: protocadherin-20 [Saimiri boliviensis boliviensis]
Length = 952
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F + + T++EN + L A DAD G ++SY + G D YF++D+
Sbjct: 532 NAPIFLQPLIELTIEENNTPNAFLTKLYATDAD-SGERGQVSYFL-GPDAPSYFSLDS-- 587
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ V T++D K+K Y T+RAVD G PPRE+
Sbjct: 588 -VTGILTVSTQLDREEKEK------------------YRYTVRAVDCGKPPRES 622
>gi|426350395|ref|XP_004042761.1| PREDICTED: protocadherin alpha-2 [Gorilla gorilla gorilla]
Length = 1443
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 43/110 (39%), Positives = 54/110 (49%), Gaps = 19/110 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ VY+ + EN GTLV+ L A+DAD G NS+I YS+ G D TI +
Sbjct: 884 NEPTFAQSVYKVKLLENTANGTLVVKLNASDAD-EGSNSEIVYSL-GSDVSS--TIQTK- 938
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
F I P + TK K LD E A Y + + A DKGTP
Sbjct: 939 ----FTIDPISGEIRTKGK---------LDYEEAK-SYEIQVTATDKGTP 974
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 19/115 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F VY+ + E GTLV TL A+DAD G+N ++ +S G
Sbjct: 238 NAPLFDQAVYRVHLLETTANGTLVATLNASDAD-EGVNGEVVFSFDSGIS---------- 286
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
R + K + E I ++ LD E Y + ++AVDKG+PP +
Sbjct: 287 -----RDIQEKFKVDSSSGE--IRLIDKLDYEETK-SYEIQVKAVDKGSPPMSNH 333
Score = 36.2 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F+ Y VKEN P G + T+ A DAD N+ +SYS+
Sbjct: 451 NAPAFAQPEYTVFVKENNPPGCHIFTVSAWDADAQ-ENALVSYSL 494
Score = 36.2 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F+ Y VKEN P G + T+ A DAD N+ +SYS+
Sbjct: 1097 NAPAFAQPEYTVFVKENNPPGCHIFTVSAWDADAQ-ENALVSYSL 1140
>gi|348516614|ref|XP_003445833.1| PREDICTED: protocadherin-20-like [Oreochromis niloticus]
Length = 886
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 23/113 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + + +V+EN P T + L+A+D D ++ Y + GGD G F +D
Sbjct: 468 NAPVFQQSLVEISVEENNPPNTFLTQLQASDQDSES-RGEVLY-LLGGDAPGIFVVDR-- 523
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+ V T +D K+ Y +RAVD+GTP RE
Sbjct: 524 -VTGILTVATSLDREEKET------------------YRFIVRAVDQGTPRRE 557
>gi|301621400|ref|XP_002940043.1| PREDICTED: hypothetical protein LOC100490327 [Xenopus (Silurana)
tropicalis]
Length = 4900
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 39/110 (35%), Positives = 54/110 (49%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG--GDGLGYFTIDN 59
N PVFS VY+ TV EN P+ + VI++ A+D D G N++I+YSV + L F+I+
Sbjct: 236 NFPVFSKDVYKTTVNENMPVNSTVISVTASDKD-EGTNAQITYSVSKTTNNALHVFSIN- 293
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
P N I + K LD E A Y L ++A D G
Sbjct: 294 --PFNG-----------------EIKIQKHLDYE-ATQNYELAIQAKDGG 323
Score = 42.7 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S + E+ P GT+V ++A D D G N ++ + G
Sbjct: 1964 NAPEISVTSITTPISEDSPSGTVVALIEAHDVD-SGENGEVDCQIIG------------- 2009
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
VP K+ + Y IV LDRE +P Y++T+ A+DKG+PP T++ T R
Sbjct: 2010 ------TVPFKL-LSSSGNFYKIVTTGTLDREKSPY-YSITILAMDKGSPPL-TFRKTIR 2060
Score = 42.0 bits (97), Expect = 0.078, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP + + E+ GT+V +KA D D G N ++ + G
Sbjct: 1163 NAPGITITSINTPISEDSAPGTVVALIKAHDLDS-GENGEVDCEIMG------------- 1208
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
VP K+ + Y IV LDRE +P YN+T++A+D+G+PP
Sbjct: 1209 ------TVPFKL-LSSSGNFYKIVTTNSLDREKSPY-YNITIQAIDRGSPP 1251
Score = 42.0 bits (97), Expect = 0.082, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 10/67 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS VY+ ++ EN PI + ++ + A D D G+NS+I Y YF+ ++
Sbjct: 1859 NLPVFSQEVYKVSINENIPINSTILYVSANDKD-EGINSQIRY---------YFSTSSKQ 1908
Query: 62 PLNHFRI 68
LN F I
Sbjct: 1909 ILNTFII 1915
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S V E+ GT+V +KA D D G+N ++ + G
Sbjct: 4439 NAPEISVTSVTTPVSEDSAPGTVVALIKARDLD-SGINGEVECQIIGS------------ 4485
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
VP K+ + Y IV LDREI+ YN+T++A DKG+P
Sbjct: 4486 -------VPFKLSLSSGNF-YKIVTTSTLDREISS-NYNITIQAKDKGSP 4526
Score = 40.4 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
N P+FS +Y+ ++ EN P+ + V+ + A+D D G+NS+++YS
Sbjct: 2699 NFPMFSQEIYKVSINENMPLNSTVLYVSASDKD-EGINSQLTYS 2741
Score = 40.0 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
N P+F+ VY+ +++EN P+ + ++ + A D D G+N++I+YS
Sbjct: 3516 NFPIFAQEVYKVSIRENMPLNSTILHVSANDKD-EGINAQITYS 3558
Score = 39.7 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 10/67 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F+ VY ++ EN P+ + ++ + A D D G NS+I+Y YF ++
Sbjct: 1058 NAPIFTQEVYTVSLNENIPVNSTILRVSANDKD-EGSNSQITY---------YFAASSKQ 1107
Query: 62 PLNHFRI 68
+N F I
Sbjct: 1108 AMNTFII 1114
Score = 38.5 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
N P+F VY ++ EN P+ + V+ + A D D G+NS+I+YS
Sbjct: 4334 NFPIFGQEVYTVSINENIPLNSTVLCVSANDKD-QGINSQITYS 4376
Score = 35.8 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 50/116 (43%), Gaps = 22/116 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P S + E+ P G +V + A D D G N ++ + ID
Sbjct: 3621 NIPEISVTSVTTAISEDSPSGIVVALIVAHDLDS-GENGEMDCQI----------ID--- 3666
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+VP K+ T Y IV LDRE+ Y++T++A DKG+PP + K
Sbjct: 3667 ------LVPFKL-LSTSGNFYKIVTSSTLDREMKS-HYDITIQATDKGSPPLSSRK 3714
Score = 35.4 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 37/107 (34%), Positives = 51/107 (47%), Gaps = 12/107 (11%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG----LGYFTI 57
NAP+F Y A + EN G L+ +L A D D G N+K++YS+ + YF+I
Sbjct: 446 NAPLFIKPTYDAFLPENNLPGALIYSLHAKDLD-VGDNAKVTYSILNTNTDFSVSSYFSI 504
Query: 58 DNE-GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTL 103
+ E G L R ++ KE+ I VL D PL N TL
Sbjct: 505 NIETGVLYAQRTFDFEV-----HKEFLIQVLA-SDNGSPPLSSNATL 545
>gi|397518036|ref|XP_003829204.1| PREDICTED: protocadherin alpha-2 [Pan paniscus]
Length = 808
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 43/110 (39%), Positives = 54/110 (49%), Gaps = 19/110 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ VY+ + EN GTLV+ L A+DAD G NS+I YS+ G D TI +
Sbjct: 238 NEPTFAQSVYKVKLLENTANGTLVVKLNASDAD-EGSNSEIVYSL-GSDVSS--TIQTK- 292
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
F I P + TK K LD E A Y + + A DKGTP
Sbjct: 293 ----FTIDPISGEIRTKGK---------LDYEEAK-SYEIQVTATDKGTP 328
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 29/117 (24%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGL--GYFT 56
NAP F+ Y VKEN P G + T+ A DAD N+ +SYS+ R G+ Y +
Sbjct: 451 NAPAFAQPEYTVFVKENNPPGCHIFTVSAWDADAQ-ENALVSYSLVERRVGERALSSYVS 509
Query: 57 IDNEG-------PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE--IAPLGYNLTLR 104
+ E PL+H +E ++ ++ R+ + PLG N+TL+
Sbjct: 510 VHAESGKVYALQPLDH--------------EEVELLQFQVSARDAGVPPLGSNVTLQ 552
>gi|390459333|ref|XP_003732279.1| PREDICTED: protocadherin beta-15-like [Callithrix jacchus]
Length = 787
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 23/45 (51%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAPVF+ +Y+ V EN PIG+LV+ + A D D G N +ISYS+
Sbjct: 238 NAPVFAQALYEVQVPENSPIGSLVVKVSARDLD-TGTNGEISYSL 281
>gi|345308717|ref|XP_001521137.2| PREDICTED: hypothetical protein LOC100092558 [Ornithorhynchus
anatinus]
Length = 1660
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
NAPVF+ VYQ V+E+ P+GT ++ + A D D G NS+++YS R
Sbjct: 238 NAPVFTQPVYQVRVREDVPVGTRILRVNATDPD-EGTNSEVTYSFR 282
Score = 43.1 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N PVFS VY+ +++E+ P G+ V+ ++A+D D G+N++I++S RG D
Sbjct: 1024 NPPVFSQEVYKISLRESLPQGSSVLRVEASDRD-EGVNAQITFSFRGID 1071
>gi|170590870|ref|XP_001900194.1| Cadherin domain containing protein [Brugia malayi]
gi|158592344|gb|EDP30944.1| Cadherin domain containing protein [Brugia malayi]
Length = 2088
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 42/121 (34%), Positives = 57/121 (47%), Gaps = 17/121 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLG--YFTID- 58
N P F Y A+V EN L+I + A D+D GMN KISYS+ GD + YF ID
Sbjct: 924 NRPFFEKAFYSASVAENGDSDELIIKVTARDSD-SGMNGKISYSLMTGDSVAQKYFKIDE 982
Query: 59 -----------NEGPLNHFRIVPTKIDPGTKK-KEYNIVVLKLLDR-EIAPLGYNLTLRA 105
+ LN + + D G + E +V +++LDR + AP NL A
Sbjct: 983 VSGEIFTTSSLDAEELNEYHLHVIAKDHGNPQLSEMVVVKIEVLDRNDNAPRFSNLFHGA 1042
Query: 106 V 106
V
Sbjct: 1043 V 1043
>gi|66773264|ref|NP_001019345.1| protocadherin 2 gamma 1 precursor [Danio rerio]
gi|51557437|gb|AAU06405.1| protocadherin cluster 2 gamma 1 [Danio rerio]
Length = 948
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
NAPVFS VY+ ++ EN P+ T+V+T+ A DAD G N +++Y+
Sbjct: 239 NAPVFSQAVYKVSLPENSPVDTVVVTVSATDAD-EGQNGEVTYA 281
Score = 36.6 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 38 MNSKISYSVRGGDGLGYFTIDNEGPLNHFRI-------VPTKIDPGTKKKEYNIVVLKLL 90
+NS + S G +G + + N+ ++ VP K+ P K Y++V L
Sbjct: 353 LNSPVPESALPGTEVGIINVQDRDSENNGQVRCSIQQNVPFKLVPSIKNY-YSLVTTGEL 411
Query: 91 DREIAPLGYNLTLRAVDKGTPPRETYK 117
DRE+ YN+T+ A D+G+PP + K
Sbjct: 412 DRELL-FEYNITITATDEGSPPLSSTK 437
>gi|190336619|gb|AAI62458.1| Protocadherin 2 gamma 1 [Danio rerio]
Length = 948
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
NAPVFS VY+ ++ EN P+ T+V+T+ A DAD G N +++Y+
Sbjct: 239 NAPVFSQAVYKVSLPENSPVDTVVVTVSATDAD-EGQNGEVTYA 281
Score = 36.2 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 38 MNSKISYSVRGGDGLGYFTIDNEGPLNHFRI-------VPTKIDPGTKKKEYNIVVLKLL 90
+NS + S G +G + + N+ ++ VP K+ P K Y++V L
Sbjct: 353 LNSPVPESALPGTEVGIINVQDRDSENNGQVRCSIQQNVPFKLVPSIKNY-YSLVTTGEL 411
Query: 91 DREIAPLGYNLTLRAVDKGTPPRETYK 117
DRE+ YN+T+ A D+G+PP + K
Sbjct: 412 DRELLS-EYNITITATDEGSPPLSSTK 437
>gi|334311085|ref|XP_001377757.2| PREDICTED: protocadherin gamma-A4-like [Monodelphis domestica]
Length = 822
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
NAPVF+ F Y +V EN P+GT ++ + A D D GMN +SY R
Sbjct: 238 NAPVFTQFQYSVSVPENVPVGTCLLRVNATDPD-EGMNGDVSYYFR 282
Score = 38.5 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N P F VY A + EN P GT + +L A D+D G N +SYS+
Sbjct: 448 NPPAFIQTVYSAYIMENNPRGTSIYSLTAHDSD-IGENGHVSYSI 491
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P + +++ EN G+++ D D G N +++ S+
Sbjct: 343 NTPDVTITSVTSSISENSSAGSMIALFNVHDKDS-GENGQVTCSIP-------------- 387
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
H +P K++ + Y++V K LDRE + YN+T+RA D+G PP T
Sbjct: 388 --EH---LPFKLEE-SYGNYYSLVTNKALDREQVSM-YNITVRATDRGNPPLST 434
>gi|74149728|dbj|BAE43857.1| Protocadherin alpha [Macaca fuscata]
Length = 948
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 42/112 (37%), Positives = 55/112 (49%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ VY+ + EN GTLV+ L A+DAD G NS+I YS+ G D
Sbjct: 238 NEPTFAQSVYKVKLLENTANGTLVVKLNASDAD-EGSNSEIVYSL-GSD----------- 284
Query: 62 PLNHFRIVPTK--IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
F + TK IDP + + I + LD E A Y + + A DKGTP
Sbjct: 285 ---VFSTIQTKFTIDPSSGE----IRTMGKLDYEEAK-SYEIQVTATDKGTP 328
>gi|444525565|gb|ELV14091.1| Protocadherin gamma-B5 [Tupaia chinensis]
Length = 508
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG-GDGLGYFTIDN 59
NAPVFS VY+ +++EN P GT V+ + A D D G+N++I+YS + GD F +D+
Sbjct: 238 NAPVFSQDVYRVSLRENVPPGTSVLKVTATDQD-EGVNAEITYSFKSLGDVGKMFMLDH 295
>gi|403256584|ref|XP_003920949.1| PREDICTED: protocadherin beta-8-like [Saimiri boliviensis
boliviensis]
Length = 1136
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAPVF+ +Y+ V EN PIG+LV+ + A D D G N +ISYS+
Sbjct: 829 NAPVFAQALYEVQVPENSPIGSLVVKVSARDLD-TGTNGEISYSL 872
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
NAP F +YQ V EN P+ +LV T+ A D D G+N +I YS GD
Sbjct: 236 NAPEFVQPLYQVQVSENSPLESLVATVSARDLD-MGINGEIFYSFFYGD 283
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 50/112 (44%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF + + EN P GT+ + A D D G+N+ +Y +
Sbjct: 127 NSPVFPEGEMILKIMENTPPGTIFPLINAQDLD-VGINNIQNYIIY-------------- 171
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P +H ++ G K E +V+ K LDRE LTL AVD G PPR
Sbjct: 172 PNSHVHVLTQNGSEGRKYPE--LVLDKALDRE-EQSELRLTLMAVDGGAPPR 220
>gi|212286098|ref|NP_001131054.1| cadherin-20 precursor [Xenopus laevis]
gi|82245681|sp|Q91838.1|CAD20_XENLA RecName: Full=Cadherin-20; AltName: Full=F-cadherin; Flags:
Precursor
gi|854635|emb|CAA59679.1| F-cadherin [Xenopus laevis]
Length = 790
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 12/126 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P F D Y A+V E P+GT +I + A DAD P G ++++ YS+ G YF++D+
Sbjct: 154 NEPKFLDGPYTASVPEMSPVGTSIIQVSATDADDPTYGSSARVVYSILQGQ--PYFSVDS 211
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTP--PR 113
+ + R T +D ++ I+ K + ++ L N+TL V+ P P+
Sbjct: 212 KTGI--IRTALTNMDRESRDYYEVIIQAKDMGGQLGGLAGTTTVNVTLSDVNDNPPRFPQ 269
Query: 114 ETYKAT 119
+ Y+ +
Sbjct: 270 KHYQMS 275
>gi|262092557|gb|ACY25675.1| cadherin [Aedes aegypti]
Length = 489
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNE 60
N P F +A EN +G +++ KA D D G SKI+Y + R D F+I +E
Sbjct: 254 NTPRFRRPHMEAYTSENDEVGKTLVSFKAIDIDKAG-KSKITYMINRATDRKRQFSISDE 312
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
G + + + LDRE A YNL + A+D G PPR
Sbjct: 313 G---------------------TVTIQRQLDRE-AISKYNLEILAIDDGVPPR 343
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 49/110 (44%), Gaps = 17/110 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAP F +Y V EN +G V+T+KA D D G ++KI YS+ I+
Sbjct: 23 NAPSFPQGIYYGNVTENGTVGMYVMTIKAQDNDDVDEGTHAKIVYSIEKN------AIEE 76
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
E L F I P D G + LDRE P Y+L + A D G
Sbjct: 77 ETGLPIFDINP---DTGVI-----TTAVCCLDREKTP-DYSLQIVATDGG 117
>gi|354484251|ref|XP_003504303.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 [Cricetulus
griseus]
Length = 3288
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 51/115 (44%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
NAP F Y V E+ P T V+ + A D D N ++ Y+ + G DG G FTI+
Sbjct: 923 NAPQFVASHYTGLVSEDAPPFTSVLQISATDRDAHA-NGRVQYTFQNGEDGDGDFTIEPT 981
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ + ++ LDRE P+ Y LT AVD+G PP T
Sbjct: 982 SGI--------------------VRTVRRLDREAVPV-YELTAYAVDRGVPPLRT 1015
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG 48
+AP+F +Q +V EN P+G VI ++A DAD G NS++ YS+ G
Sbjct: 613 HAPIFVSTPFQVSVLENAPLGHSVIHIQAVDAD-HGENSRLEYSLTG 658
Score = 40.4 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y + E+ +GT V+++ A D D NS ISY + GG+ F I +G
Sbjct: 718 NRPEFTMKEYHLRLNEDAAVGTSVVSVTAVDRDA---NSAISYQITGGNSRNRFAISTQG 774
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREI 94
+ +V + K++ Y +VL DR +
Sbjct: 775 GVG---LVTLALPLDYKQERYFKLVLTASDRAL 804
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NEGP 62
PVF Y ++ E++P+G+ V+ + A+D D G N++I+Y + D L F ID N G
Sbjct: 822 PVFQSAHYSVSMNEDRPVGSTVVVISASD-DDVGENARITYLLE--DNLPQFRIDANSGA 878
Query: 63 L 63
+
Sbjct: 879 I 879
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 48/111 (43%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS+ Y A V+E+ T+V+ + A D D N + Y++ G+ G+F ID+
Sbjct: 507 NTPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDA-NGLVHYNIISGNSRGHFAIDS-- 563
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I V+ LD E A Y L +RA D G PP
Sbjct: 564 ------------------LTGEIQVVAPLDFE-AEREYVLRIRAQDAGRPP 595
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAPVF ++ VKEN +G++V + A D D G N+ I Y + G+ F +D
Sbjct: 1029 NAPVFPAEEFEVRVKENSIVGSVVAQITAVDPD-EGPNAHIMYQIVEGNIPELFQMD 1084
>gi|359319304|ref|XP_536515.4| PREDICTED: cadherin-6 [Canis lupus familiaris]
Length = 930
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P+F+ VY ATV E +GT V+ + A DAD P G ++K+ YS+ G YF++++
Sbjct: 155 NEPIFTKDVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQ--PYFSVES 212
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTP--PR 113
E + + +D +++ ++ K + ++ L N+TL V+ P P+
Sbjct: 213 ETGI--IKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQ 270
Query: 114 ETYK 117
TY+
Sbjct: 271 STYQ 274
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 59/138 (42%), Gaps = 26/138 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI--DN 59
N P F YQ E+ P GT + +KA+DAD G N++I YS+ G+GL F + D
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDAD-MGENAEIEYSITEGEGLDMFDVVTDQ 322
Query: 60 EGPLNHFRIVPTKIDPGTK---------------KKEYN-------IVVLKLLDREIAPL 97
E + I GT + +N I KLLDRE L
Sbjct: 323 ETQEGVITVKKIHIALGTNFNSLPWYSVDRHTDMDRIFNIDSGNGSIFTSKLLDRETL-L 381
Query: 98 GYNLTLRAVDKGTPPRET 115
+N+T+ A + P + +
Sbjct: 382 WHNITVIATEINNPKQSS 399
>gi|262263271|tpg|DAA06574.1| TPA_inf: protocadherin alpha 15 unspliced isoform [Anolis
carolinensis]
Length = 822
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 19/111 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F+ VYQ + EN GTL+I+L A D D G+N I+YS+R + + N
Sbjct: 238 NAPLFNQSVYQVKLFENATKGTLLISLNATDLD-EGINKDITYSIRSVNPQSLGALVNLD 296
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P N I + +D E +G + + A DKG PP
Sbjct: 297 PSNG-----------------QIRLSSEIDFESMKVG-EIRVEATDKGLPP 329
>gi|444725570|gb|ELW66133.1| Cadherin-6 [Tupaia chinensis]
Length = 790
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P+F+ VY ATV E +GT V+ + A DAD P G ++K+ YS+ G YF++++
Sbjct: 155 NEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQ--PYFSVES 212
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTP--PR 113
E + + +D +++ ++ K + ++ L N+TL V+ P P+
Sbjct: 213 ETGI--IKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQ 270
Query: 114 ETYK 117
TY+
Sbjct: 271 STYQ 274
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ E+ P GT + +KA+DAD G N++I YS+ G+GL F + +
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDAD-VGENAEIEYSITDGEGLDMFDVITDQ 322
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
I K+ KKK Y + V
Sbjct: 323 ETQEGIITVKKLLDFEKKKVYTLKV 347
>gi|410039500|ref|XP_001158019.3| PREDICTED: LOW QUALITY PROTEIN: cadherin-6 isoform 2 [Pan
troglodytes]
Length = 790
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P+F+ VY ATV E +GT V+ + A DAD P G ++K+ YS+ G YF++++
Sbjct: 155 NEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQ--PYFSVES 212
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTP--PR 113
E + + +D +++ ++ K + ++ L N+TL V+ P P+
Sbjct: 213 ETGI--IKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQ 270
Query: 114 ETYK 117
TY+
Sbjct: 271 STYQ 274
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ E+ P GT + +KA+DAD G N++I YS+ G+GL F + +
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDAD-VGENAEIEYSITDGEGLDMFDVITDQ 322
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
I K+ KKK Y + V
Sbjct: 323 ETQEGIITVKKLLDFEKKKVYTLKV 347
>gi|405978305|gb|EKC42706.1| Protocadherin-11 X-linked [Crassostrea gigas]
Length = 1144
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF +Y+AT+KEN P ++ T+KA D D G+ K++Y + DG F +D+
Sbjct: 447 NNPVFLQSIYRATIKENNPPNEVITTVKAVDKD-SGLAGKVTYFMH-TDGSDSFHVDSTS 504
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ + V K LDREI+P+ + A D G P
Sbjct: 505 GV--------------------VTVKKSLDREISPV-ILFHVNASDAGNP 533
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD 34
N P+FS Y A++ EN P+G V+TL A D D
Sbjct: 233 NKPLFSQAKYDASIPENHPVGKNVLTLSAQDLD 265
>gi|403290283|ref|XP_003936252.1| PREDICTED: cadherin-6 [Saimiri boliviensis boliviensis]
Length = 790
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P+F+ VY ATV E +GT V+ + A DAD P G ++K+ YS+ G YF++++
Sbjct: 155 NEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQ--PYFSVES 212
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTP--PR 113
E + + +D +++ ++ K + ++ L N+TL V+ P P+
Sbjct: 213 ETGI--IKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQ 270
Query: 114 ETYK 117
TY+
Sbjct: 271 STYQ 274
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ E+ P GT + +KA+DAD G N++I YS+ G+GL F + +
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDAD-VGENAEIEYSITDGEGLDMFDVITDQ 322
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
I K+ KKK Y + V
Sbjct: 323 ETQEGIITVKKLLDFEKKKVYTLKV 347
>gi|326673305|ref|XP_003199830.1| PREDICTED: protocadherin gamma-A11-like [Danio rerio]
Length = 791
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 21/104 (20%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
V E+ +GT++ + +D D G+N K+ S+ DN VP ++
Sbjct: 359 VMEDAKVGTVISLISVSDKDS-GINGKVVCSLS----------DN---------VPFELK 398
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
P ++ Y++V + LDRE+ P Y++ + A D G PP TYK+
Sbjct: 399 PSIQENMYSLVTKERLDRELVP-EYDIKITATDLGNPPLSTYKS 441
Score = 38.5 bits (88), Expect = 0.97, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 19/114 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+ S T++EN + T+V + A+DAD G+N ++ Y+ Y
Sbjct: 238 NRPICSSDTTTITLRENAAMDTVVTIMNASDAD-SGINGEVEYT--------YGRNMKPK 288
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
L+ F + +K I V L+D E + Y+L +RA DKG PP T
Sbjct: 289 VLDIFNL---------DRKSGEIQVKGLIDFEENEI-YSLIIRASDKGVPPLNT 332
>gi|326673351|ref|XP_003199852.1| PREDICTED: protocadherin gamma-A11-like [Danio rerio]
Length = 791
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 21/104 (20%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
V E+ +GT++ + +D D G+N K+ S+ DN VP ++
Sbjct: 359 VMEDAKVGTVISLISVSDKDS-GINGKVVCSLS----------DN---------VPFELK 398
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
P ++ Y++V + LDRE+ P Y++ + A D G PP TYK+
Sbjct: 399 PSIQENMYSLVTKERLDRELVP-EYDIKITATDLGNPPLSTYKS 441
Score = 38.5 bits (88), Expect = 0.96, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 19/114 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+ S T++EN + T+V + A+DAD G+N ++ Y+ Y
Sbjct: 238 NRPICSSDTTTITLRENAAMDTVVTIMNASDAD-SGINGEVEYT--------YGRNMKPK 288
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
L+ F + +K I V L+D E + Y+L +RA DKG PP T
Sbjct: 289 VLDIFNL---------DRKSGEIQVKGLIDFEENEI-YSLIIRASDKGVPPLNT 332
>gi|149732972|ref|XP_001500811.1| PREDICTED: cadherin-6-like [Equus caballus]
Length = 790
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P+F+ VY ATV E +GT V+ + A DAD P G ++K+ YS+ G YF++++
Sbjct: 155 NEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQ--PYFSVES 212
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTP--PR 113
E + + +D +++ ++ K + ++ L N+TL V+ P P+
Sbjct: 213 ETGI--IKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQ 270
Query: 114 ETYK 117
TY+
Sbjct: 271 STYQ 274
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ E+ P GT + +KA+DAD G N+ I YS+ G+GL F + +
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDAD-VGENAAIEYSITEGEGLDMFDVITDQ 322
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
I K+ KKK Y + V
Sbjct: 323 ETQEGIITVKKLLDFEKKKVYTLKV 347
>gi|442768496|gb|AGC70195.1| protocadherin-like protein, partial [Stylophora pistillata]
Length = 2608
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 52/114 (45%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F + Y ++E IGT ++ +A D D G N +I++S+ D LG F ID++
Sbjct: 1798 NSPKFVNSSYSVNIRELTKIGTPILRAQANDIDS-GKNGEITFSL-SSDALGIFRIDSK- 1854
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
GT I L+ D I YN RA DKG PRET
Sbjct: 1855 -------------TGT------IYTLQEFDYYITA-AYNFLCRATDKGVAPRET 1888
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS+ Y V E+ P GT ++ + A DAD G N+ ISYS + G F + + G
Sbjct: 958 HTPKFSNKSYSTHVDEHTPAGTNILNVSATDAD-TGNNALISYSFQSGVDTSMFGLRSNG 1016
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
L + + LDRE + Y T+ A DKG P+ +
Sbjct: 1017 WL---------------------FITRQLDREQQEV-YRFTVVATDKGHIPKSS 1048
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMN-SKISYSVRGGDGLGYFTI 57
P+F + Y+A + E+ GT V+T+ A AD GMN +KISY + G+ G F I
Sbjct: 2421 PMFKEPAYRARIAEDTLPGTTVLTVSA--ADDSGMNVAKISYKFKFGNSEGLFRI 2473
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 51/115 (44%), Gaps = 24/115 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ Y +V ENQP T V + A+D D G N+KISY+ E P
Sbjct: 1064 PKFTQQAYIFSVNENQPNRTFVGQVPASDKD-AGANAKISYTF-------------EPPS 1109
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
F ID T N ++L+RE Y LT++A D GT PR + +
Sbjct: 1110 LEF-----AIDHNTGIIRTN----QVLNRE-QRSSYILTVKANDHGTSPRTDHTS 1154
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP F Y+ V E+ P+G+ V+T++A+D D G N I+Y G+ FTID
Sbjct: 1165 NAPTFKKPFYEKAVPEDIPVGSSVLTVEASDPD-AGSNGMITYFFASNPGV--FTID 1218
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 23/109 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF Y+ + EN + TL+ ++ A+ D G N++I YS+ G+ FTI++ G
Sbjct: 752 PVFEPSSYKFAIDENSDVNTLLGSVYASSKD-LGTNAQIYYSISDGNIHNVFTINSTGT- 809
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I +D E +P LT++A D G+PP
Sbjct: 810 --------------------IFTQNNIDHERSPQLL-LTVQAKDGGSPP 837
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N P F+ ++ V ENQP+GT V+ + A D D G N ++YS+ G+
Sbjct: 1589 NGPEFNQSLFLGNVSENQPVGTPVMAVSAYDLD-SGENGALTYSIPRGN 1636
Score = 35.4 bits (80), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+P F + + E Q IGT+V T+ A D D G N K+ Y++ G+G F I+
Sbjct: 1268 NSPRFVNNSIFVNIPEKQAIGTVVTTVTAKDED-TGNNGKVRYTIDQGNGGKVFEIN 1323
>gi|47227082|emb|CAG00444.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2270
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 25/115 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N PVFS +V E+QP+G +++ + A D D G N ++SY ++ G+ G F+++ N
Sbjct: 1005 NTPVFSS-PSAVSVMEDQPVGFVILYVMARDED-EGENGRVSYRIQAGNTAGRFSLNPNT 1062
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
G L+ +LK LDRE + +NLT+ A D G P T
Sbjct: 1063 GSLS---------------------ILKALDREEQEV-FNLTIVAEDHGIPQLST 1095
Score = 35.4 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F +Y ++ + GT V+ + A D D G+N +++Y G G +FT++ +
Sbjct: 103 NRPAFYPVLYTVSLSTHSSPGTSVVKVTANDPDS-GLNGRVTYRTVPGGGSAFFTLNKD 160
>gi|348503600|ref|XP_003439352.1| PREDICTED: cadherin-20-like [Oreochromis niloticus]
Length = 797
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F +YQ ++ E+ P+G++V + A D D G+N+++ YS+ GDG F I +
Sbjct: 261 NPPMFDQRLYQMSIPESAPVGSVVGRIWAKDRD-IGVNAEMKYSIIDGDGRDTFDISTD- 318
Query: 62 PLNHFRIVPTK 72
P N F I+ K
Sbjct: 319 PTNLFGIITVK 329
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 7/87 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P F D YQATV E IGT VI L A DAD P G ++++ YS+ +G YF++D
Sbjct: 152 NEPRFLDGPYQATVPEMSKIGTSVIQLTATDADDPTYGNSARVVYSIL--EGQPYFSVDA 209
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVV 86
+ + R+ +D T++ Y +V+
Sbjct: 210 KTGV--VRVSLADMDRETREN-YTVVI 233
>gi|332251712|ref|XP_003274990.1| PREDICTED: cadherin-6 [Nomascus leucogenys]
Length = 790
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P+F+ VY ATV E +GT V+ + A DAD P G ++K+ YS+ G YF++++
Sbjct: 155 NEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQ--PYFSVES 212
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTP--PR 113
E + + +D +++ ++ K + ++ L N+TL V+ P P+
Sbjct: 213 ETGI--IKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQ 270
Query: 114 ETYK 117
TY+
Sbjct: 271 STYQ 274
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ E+ P GT + +KA+DAD G N++I YS+ G+GL F + +
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDAD-VGENAEIEYSITDGEGLDMFDVITDQ 322
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
I K+ KKK Y + V
Sbjct: 323 ETQEGVITVKKLLDFEKKKVYTLKV 347
>gi|297294050|ref|XP_001084546.2| PREDICTED: cadherin-6 isoform 4 [Macaca mulatta]
Length = 761
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P+F+ VY ATV E +GT V+ + A DAD P G ++K+ YS+ G YF++++
Sbjct: 155 NEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQ--PYFSVES 212
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTP--PR 113
E + + +D +++ ++ K + ++ L N+TL V+ P P+
Sbjct: 213 ETGI--IKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQ 270
Query: 114 ETYK 117
TY+
Sbjct: 271 STYQ 274
>gi|66773254|ref|NP_001019351.1| protocadherin 2 gamma 7 precursor [Danio rerio]
gi|51557478|gb|AAU06424.1| protocadherin cluster 2 gamma 7 [Danio rerio]
Length = 935
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 10/72 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR--GGDGLGYFTIDN 59
NAPVFS VY+ ++ EN P+ T+V+T+ A DAD G N +++Y+ G F++D
Sbjct: 226 NAPVFSQAVYKVSLPENSPVDTVVVTVSATDAD-EGQNGEVTYAFSRISGKARKMFSLDP 284
Query: 60 E-------GPLN 64
+ GPL+
Sbjct: 285 DIGDIRVAGPLD 296
>gi|410260548|gb|JAA18240.1| cadherin 6, type 2, K-cadherin (fetal kidney) [Pan troglodytes]
gi|410289524|gb|JAA23362.1| cadherin 6, type 2, K-cadherin (fetal kidney) [Pan troglodytes]
gi|410330019|gb|JAA33956.1| cadherin 6, type 2, K-cadherin (fetal kidney) [Pan troglodytes]
Length = 790
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P+F+ VY ATV E +GT V+ + A DAD P G ++K+ YS+ G YF++++
Sbjct: 155 NEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQ--PYFSVES 212
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTP--PR 113
E + + +D +++ ++ K + ++ L N+TL V+ P P+
Sbjct: 213 ETGI--IKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQ 270
Query: 114 ETYK 117
TY+
Sbjct: 271 STYQ 274
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ E+ P GT + +KA+DAD G N++I YS+ G+GL F + +
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDAD-VGENAEIEYSITDGEGLDMFDVITDQ 322
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
I K+ KKK Y + V
Sbjct: 323 ETQEGIITVKKLLDFEKKKVYTLKV 347
>gi|296194856|ref|XP_002745137.1| PREDICTED: cadherin-6 isoform 2 [Callithrix jacchus]
Length = 790
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P+F+ VY ATV E +GT V+ + A DAD P G ++K+ YS+ G YF++++
Sbjct: 155 NEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQ--PYFSVES 212
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTP--PR 113
E + + +D +++ ++ K + ++ L N+TL V+ P P+
Sbjct: 213 ETGI--IKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQ 270
Query: 114 ETYK 117
TY+
Sbjct: 271 STYQ 274
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ E+ P GT + +KA+DAD G N++I YS+ G+GL F + +
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDAD-VGENAEIEYSITDGEGLDMFHVITDQ 322
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
I K+ KKK Y + V
Sbjct: 323 ETQEGIITVKKLLDFEKKKVYTLKV 347
>gi|262263221|tpg|DAA06598.1| TPA_inf: protocadherin gamma a5 isoform [Anolis carolinensis]
Length = 942
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
NAP+F+ +Y+ TVKEN P G+ V T+ A D D G+N ++ YS+R
Sbjct: 240 NAPIFNQPIYEVTVKENIPKGSTVATVSATDLD-EGLNGEVKYSLR 284
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP + +++ E+ P GT++ L D D G+N +++ SV N
Sbjct: 345 NAPELIVNYFTSSISESSPAGTVIAILNVQDQD-SGVNGEVTCSV-----------PNNL 392
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
P FR+ + D Y++V LDRE P +N+T+ D G PP T
Sbjct: 393 P---FRLERSVDD------FYSLVTAGTLDREHMPT-FNITITGTDNGIPPLST 436
>gi|426246682|ref|XP_004017121.1| PREDICTED: cadherin-6 [Ovis aries]
Length = 790
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P+F+ VY ATV E +GT V+ + A DAD P G ++K+ YS+ G YF++++
Sbjct: 155 NEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQ--PYFSVES 212
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTP--PR 113
E + + +D +++ ++ K + ++ L N+TL V+ P P+
Sbjct: 213 ETGI--IKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQ 270
Query: 114 ETYK 117
TY+
Sbjct: 271 STYQ 274
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ E+ P GT + +KA+DAD G N++I YS+ G+GL F + +
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDAD-MGENAEIEYSITEGEGLDMFDVITDQ 322
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
I K+ KKK Y + V
Sbjct: 323 ETQEGIITVKKLLDFEKKKVYTLKV 347
>gi|397495449|ref|XP_003818567.1| PREDICTED: cadherin-6 [Pan paniscus]
gi|410224428|gb|JAA09433.1| cadherin 6, type 2, K-cadherin (fetal kidney) [Pan troglodytes]
Length = 790
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P+F+ VY ATV E +GT V+ + A DAD P G ++K+ YS+ G YF++++
Sbjct: 155 NEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQ--PYFSVES 212
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTP--PR 113
E + + +D +++ ++ K + ++ L N+TL V+ P P+
Sbjct: 213 ETGI--IKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQ 270
Query: 114 ETYK 117
TY+
Sbjct: 271 STYQ 274
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ E+ P GT + +KA+DAD G N++I YS+ G+GL F + +
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDAD-VGENAEIEYSITDGEGLDMFDVITDQ 322
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
I K+ KKK Y + V
Sbjct: 323 ETQEGIITVKKLLDFEKKKVYTLKV 347
>gi|281345411|gb|EFB20995.1| hypothetical protein PANDA_000352 [Ailuropoda melanoleuca]
Length = 1951
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
NAPVFS VY+ +++EN P GT V+ + A D D G+NS+I+YS
Sbjct: 910 NAPVFSQDVYRVSLRENVPPGTAVVQVSATDQD-EGINSEITYS 952
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR-----GGDGLGYFT 56
N P F Y A + EN P G + T+ A D D G N++++YSV GG Y +
Sbjct: 448 NPPTFPQVSYSAYIPENNPRGASIFTVMAQDPD-SGRNAQVTYSVTEDIIMGGPLSSYVS 506
Query: 57 IDNE 60
I+++
Sbjct: 507 INSD 510
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
NAPVF Y V EN P G + + A+D D G N ++SYS+ D
Sbjct: 1116 NAPVFHQASYVVHVAENNPPGASIAQVSASDPD-LGPNGRVSYSIVASD 1163
Score = 35.8 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
NAPVF+ +Y+ V EN +GT ++ + A+D D G N +++Y
Sbjct: 1618 NAPVFALPIYRVKVPENVSLGTRLLAVSASDPD-EGANGEVTY 1659
>gi|77736223|ref|NP_001029812.1| cadherin-6 precursor [Bos taurus]
gi|122140080|sp|Q3SWX5.1|CADH6_BOVIN RecName: Full=Cadherin-6; Flags: Precursor
gi|74356303|gb|AAI04619.1| Cadherin 6, type 2, K-cadherin (fetal kidney) [Bos taurus]
gi|296475724|tpg|DAA17839.1| TPA: cadherin-6 precursor [Bos taurus]
gi|440912592|gb|ELR62149.1| Cadherin-6 [Bos grunniens mutus]
Length = 790
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P+F+ VY ATV E +GT V+ + A DAD P G ++K+ YS+ G YF++++
Sbjct: 155 NEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQ--PYFSVES 212
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTP--PR 113
E + + +D +++ ++ K + ++ L N+TL V+ P P+
Sbjct: 213 ETGI--IKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQ 270
Query: 114 ETYK 117
TY+
Sbjct: 271 STYQ 274
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ E+ P GT + +KA+DAD G N++I YS+ G+GL F + +
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDAD-VGENAEIEYSITEGEGLDMFDVITDQ 322
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
I K+ KKK Y + V
Sbjct: 323 ETQEGIITVKKLLDFEKKKVYTLKV 347
>gi|426385038|ref|XP_004059045.1| PREDICTED: cadherin-6 [Gorilla gorilla gorilla]
Length = 790
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P+F+ VY ATV E +GT V+ + A DAD P G ++K+ YS+ G YF++++
Sbjct: 155 NEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQ--PYFSVES 212
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTP--PR 113
E + + +D +++ ++ K + ++ L N+TL V+ P P+
Sbjct: 213 ETGI--IKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQ 270
Query: 114 ETYK 117
TY+
Sbjct: 271 STYQ 274
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ E+ P GT + +KA+DAD G N++I YS+ G+GL F + +
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDAD-VGENAEIEYSITDGEGLDMFDVVTDQ 322
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
I K+ KKK Y + V
Sbjct: 323 ETQEGIITVKKLLDFEKKKVYTLKV 347
>gi|66773184|ref|NP_001012676.2| protocadherin 1 gamma b 2 [Danio rerio]
gi|50881562|gb|AAT85361.1| protocadherin cluster 1 gamma 5 [Danio rerio]
Length = 951
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 22/116 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P + T+ EN P+GT V + DAD G +GL + +I+
Sbjct: 354 NSPTIQLMSFSNTIAENSPVGTTVAVINVEDAD------------SGKNGLVHCSINQN- 400
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+P KI+ + + Y+++ +LDRE YN+T+ D+G+P R + K
Sbjct: 401 -------IPFKIE-SSFSEYYSLITDDMLDRETV-TEYNITILVSDQGSPARHSNK 447
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 20/107 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPV V++ V+EN P GT++ T+ AADAD G+N +SY YF + ++
Sbjct: 249 NAPVCKQSVFKTEVRENSPAGTVMGTVSAADAD-EGVNGHVSY---------YFALASKE 298
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK 108
F I + + +L LD E + Y L + A DK
Sbjct: 299 ERELFNI---------NSETGEVTLLAHLDYE-SQNSYQLNINAKDK 335
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 19/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ V EN G ++T+KA DAD G N+++SY ++ D G
Sbjct: 459 NPPKFGSDEYKTFVNENNSPGVTILTVKANDAD-WGPNAQLSYFLKDEDIRG-------A 510
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE-IAPLGYNLTLRAVDKGTPP 112
PL+ +V GT + +K D E + +N+T R D G+PP
Sbjct: 511 PLS--SLVSVDALTGT------VHAVKSFDFEQLKSFSFNVTAR--DGGSPP 552
>gi|297676176|ref|XP_002816020.1| PREDICTED: protocadherin alpha-2 [Pongo abelii]
Length = 809
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 43/110 (39%), Positives = 54/110 (49%), Gaps = 19/110 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ VY+ + EN GTLV+ L A+DAD G NS+I YS+ G D TI +
Sbjct: 238 NEPTFAQSVYKVKLLENTANGTLVVKLNASDAD-EGSNSEIVYSL-GSDVSS--TIQTK- 292
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
F I P + TK K LD E A Y + + A DKGTP
Sbjct: 293 ----FTIDPISGEIRTKGK---------LDYEEAK-SYEIQVTATDKGTP 328
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 29/117 (24%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGL--GYFT 56
NAP F+ Y VKEN P G + T+ A DAD N+ +SYS+ R G+ Y +
Sbjct: 452 NAPAFAQPEYTVFVKENNPPGCHIFTVSAWDADAQ-ENALVSYSLVEQRVGERALSSYVS 510
Query: 57 IDNEG-------PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE--IAPLGYNLTLR 104
+ E PL+H +E ++ ++ R+ + PLG N+TL+
Sbjct: 511 VHAESGKVYALQPLDH--------------EELELLQFQVRARDAGVPPLGSNVTLQ 553
>gi|449490371|ref|XP_002196098.2| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2
[Taeniopygia guttata]
Length = 2548
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 41/111 (36%), Positives = 54/111 (48%), Gaps = 24/111 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGY-FTIDNE 60
NAP+F +QATV EN P+G VI ++A DAD G NS + Y++ G G+ FTI+N
Sbjct: 752 NAPIFVSTPFQATVLENVPVGYSVIHVQAIDAD-SGDNSWLVYTLL-ETGTGFPFTINNS 809
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
IVV LDRE+ Y+ + A D GTP
Sbjct: 810 TGW--------------------IVVASELDREVVDF-YSFRVEAQDHGTP 839
Score = 38.5 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
NAP FS+ Y A V E+ V+ + A D D G N+ + YS+ G+ G+F ID +
Sbjct: 646 NAPQFSERRYVAQVPEDVVPNVAVLQVMATDRD-KGSNALVHYSIVSGNTRGHFYIDAQT 704
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G L+ V+ LD E+ + L +RA D G PP
Sbjct: 705 GALD---------------------VVTPLDYEVTK-EFTLRIRAQDGGRPP 734
Score = 38.5 bits (88), Expect = 0.98, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 54/115 (46%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR-GGDGLGYFTIDNE 60
NAP F YQ ++ E+ P T V+ + A D D G+N ++ Y+ + G DG G F I++
Sbjct: 1062 NAPQFLRHSYQGSIYEDVPTFTSVLQVSATDRD-SGLNGRVFYTFQGGDDGDGDFIIEST 1120
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ + L+ LDRE PL Y L A+DKG P R T
Sbjct: 1121 SGI--------------------VRTLRRLDRENVPL-YCLRAFAMDKGIPARRT 1154
Score = 36.2 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
PVF Y V E++P+GT V+ + A D D G N++I+Y + D + F+I
Sbjct: 961 PVFQSSHYTINVNEDRPVGTTVVVISATDED-TGENARITYLME--DSIPQFSI 1011
Score = 35.8 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVF + V+EN PIG +V + A D D G N++I Y + G+ F +D
Sbjct: 1168 NPPVFERDEFDIFVEENSPIGLVVARITATDPD-EGTNAQIMYQIVEGNIPEVFQLD 1223
Score = 35.4 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDN 59
P F Y+ +V+EN +G V+T++A D D G N+ I Y + GD F ID+
Sbjct: 540 PAFEQLEYRESVRENLEVGYEVLTVRATDGD-AGPNANILYRLLNAGDANEVFEIDS 595
>gi|410989755|ref|XP_004001124.1| PREDICTED: protocadherin alpha-6 [Felis catus]
Length = 814
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 42/117 (35%), Positives = 53/117 (45%), Gaps = 31/117 (26%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y+ + EN GT+VI L A+D D G+N +ISYS
Sbjct: 246 NAPDFEQTEYEVRIFENSGNGTIVIRLNASDRD-EGVNGEISYSFNS------------- 291
Query: 62 PLNHFRIVPT------KIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+VPT KIDP T + IV+ LD E L Y + + A DKG PP
Sbjct: 292 ------LVPTMVSDQFKIDPNTGE----IVLRGNLDFEKVNL-YKIRIDATDKGHPP 337
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 29/117 (24%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGL--GYFT 56
NAP F+ Y VKEN P G + T+ A DAD N+ +SYS+ R G+ Y +
Sbjct: 459 NAPTFAQAEYTVFVKENNPPGCHIFTVSARDADAQ-ENALVSYSLVERRVGERALSSYVS 517
Query: 57 IDNEG-------PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIA--PLGYNLTLR 104
+ E PL+H +E ++ ++ R+ A PLG N+TL+
Sbjct: 518 VHAESGKVYALQPLDH--------------EELELLQFQVSARDAAVPPLGSNVTLQ 560
>gi|291395191|ref|XP_002714142.1| PREDICTED: cadherin 6, type 2 preproprotein-like [Oryctolagus
cuniculus]
Length = 790
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P+F+ VY ATV E +GT V+ + A DAD P G ++K+ YS+ G YF++++
Sbjct: 155 NEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQ--PYFSVES 212
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTP--PR 113
E + + +D +++ ++ K + ++ L N+TL V+ P P+
Sbjct: 213 ETGI--IKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQ 270
Query: 114 ETYK 117
TY+
Sbjct: 271 STYQ 274
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 18/115 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ E+ P GT + +KA+DAD G N++I YS+ G+GL F + +
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDAD-MGENAEIEYSITDGEGLDMFDVITD- 321
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ +E I V KLLD E + Y L + A + PR Y
Sbjct: 322 ---------------QETQEGIITVKKLLDFEKQKV-YTLKVEASNPHVEPRFLY 360
>gi|262092561|gb|ACY25677.1| cadherin [Aedes aegypti]
gi|262092583|gb|ACY25688.1| cadherin [Aedes aegypti]
gi|262092587|gb|ACY25690.1| cadherin [Aedes aegypti]
gi|262092589|gb|ACY25691.1| cadherin [Aedes aegypti]
gi|262092591|gb|ACY25692.1| cadherin [Aedes aegypti]
gi|262092597|gb|ACY25695.1| cadherin [Aedes aegypti]
gi|262092599|gb|ACY25696.1| cadherin [Aedes aegypti]
Length = 489
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNE 60
N P F +A EN +G +++ KA D D G SKI+Y + R D F+I +E
Sbjct: 254 NTPRFRRPHMEAYTSENDEVGKTLVSFKAIDIDKAG-KSKITYMINRATDRKRQFSISDE 312
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
G + + + LDRE A YNL + A+D G PPR
Sbjct: 313 G---------------------TVTIQRQLDRE-AISKYNLEILAIDDGVPPR 343
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 49/110 (44%), Gaps = 17/110 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAP F +Y V EN +G V+T+KA D D G ++KI YS+ I+
Sbjct: 23 NAPSFPQGIYYGNVTENGTVGMYVMTIKAQDNDDVDEGTHAKIVYSIEKN------AIEE 76
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
E L F I P D G + LDRE P Y+L + A D G
Sbjct: 77 ETGLPIFDINP---DTGVI-----TTAVCCLDREKTP-DYSLQIVATDGG 117
>gi|4826673|ref|NP_004923.1| cadherin-6 preproprotein [Homo sapiens]
gi|1705545|sp|P55285.1|CADH6_HUMAN RecName: Full=Cadherin-6; AltName: Full=Kidney cadherin;
Short=K-cadherin; Flags: Precursor
gi|974185|dbj|BAA06562.1| cadherin-6 [Homo sapiens]
gi|119631169|gb|EAX10764.1| cadherin 6, type 2, K-cadherin (fetal kidney), isoform CRA_b [Homo
sapiens]
gi|158256016|dbj|BAF83979.1| unnamed protein product [Homo sapiens]
Length = 790
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P+F+ VY ATV E +GT V+ + A DAD P G ++K+ YS+ G YF++++
Sbjct: 155 NEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQ--PYFSVES 212
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTP--PR 113
E + + +D +++ ++ K + ++ L N+TL V+ P P+
Sbjct: 213 ETGI--IKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQ 270
Query: 114 ETYK 117
TY+
Sbjct: 271 STYQ 274
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ E+ P GT + +KA+DAD G N++I YS+ G+GL F + +
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDAD-VGENAEIEYSITDGEGLDMFDVITDQ 322
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
I K+ KKK Y + V
Sbjct: 323 ETQEGIITVKKLLDFEKKKVYTLKV 347
>gi|355563775|gb|EHH20337.1| hypothetical protein EGK_03169, partial [Macaca mulatta]
Length = 2846
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 24/110 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF Y +V E++P+GT + TL A D D G N++I+Y + + P+
Sbjct: 621 PVFQSSHYTVSVSEDRPVGTSIATLSANDED-TGENARITYVI-------------QDPV 666
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
FRI P D GT + + LD E + Y LT+ A D G P +
Sbjct: 667 PQFRIDP---DSGT------MYTMMELDYE-NQVAYTLTIMAQDNGIPQK 706
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F +QATV EN P+G V+ ++A DAD G N+++ Y + + + G
Sbjct: 395 NEPIFVSSPFQATVLENVPLGYPVVHIQAVDAD-SGENARLHYRLV-DTASAFLGGGSAG 452
Query: 62 PLNHFRIVPTKIDPGTKKKEYN-IVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P N PT P I V LDRE Y+ + AVD G+PP
Sbjct: 453 PKNP---APTPDFPFQIHNSSGWITVCAELDREEVE-HYSFGVEAVDHGSPP 500
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP+F + V+EN P+G++V ++A D D G N++I Y + GD +F +D
Sbjct: 829 NAPMFEKDELELFVEENNPVGSVVAKIRANDPD-EGPNAQIMYQIVEGDMRHFFQLD 884
Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG 49
++PVF Y+ V+EN +G V+T++A+D D P +N+ + Y V GG
Sbjct: 183 HSPVFEQSEYRERVRENLEVGYEVLTIRASDRDSP-VNANLRYRVLGG 229
Score = 38.9 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N PVF+ Y+ + E+ +G+ V+TL+A D D NS I+Y + GG+ F + ++
Sbjct: 517 NDPVFTQPTYELRLNEDAAVGSSVLTLQARDRDA---NSVITYQLTGGNTRNRFALSSQ 572
>gi|301620403|ref|XP_002939565.1| PREDICTED: cadherin-23-like [Xenopus (Silurana) tropicalis]
Length = 2570
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 51/99 (51%), Gaps = 23/99 (23%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN-EGPLNHFRIVPTKI 73
+ E QP G V T KA D D G+N ++ YS+ GGD LG F I + EG L R+
Sbjct: 1230 ITEGQP-GPRVATFKADDKDS-GLNGQVEYSIVGGDLLGDFVISSVEGDL---RV----- 1279
Query: 74 DPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+K+Y LDRE YN+T+ A D+G PP
Sbjct: 1280 -----RKDYE------LDRENIAF-YNITIMAKDRGNPP 1306
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 25/109 (22%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P FS + +V EN+P GT VIT+ A D D G N ++Y++ G + + G +
Sbjct: 1983 PQFSKSQFSTSVYENEPEGTSVITMSATDLDE-GDNGVVTYNLEGPGSEAFLIDKDSGLI 2041
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
R+ L+ +R +NLT+ A DKG PP
Sbjct: 2042 TSRRL------------------LQSFER------FNLTVVATDKGRPP 2066
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P+F Y+A+V EN P + ++ L+A DAD G N + Y + G+ F ID
Sbjct: 566 NKPIFLKSSYEASVPENVPFSSSIVQLEATDAD-EGDNGLVWYRILSGNEKTNFRID 621
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 41/92 (44%), Gaps = 23/92 (25%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS YQ V E+ +G V+ +KA DAD G + I YS+ G+G
Sbjct: 1874 NNPIFSQSSYQKPVFEDIQLGATVLQIKATDAD-SGRFALIQYSLVDGEG---------- 1922
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
F I PT D I +L LDRE
Sbjct: 1923 ---KFGINPTTGD---------IYILSTLDRE 1942
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 24/117 (20%)
Query: 2 NAPVF---SDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+P F SD V V E+ P G V ++A D D G N +++S+ G+ G F I
Sbjct: 890 NSPQFDPTSDSV--VNVPEDCPTGRRVALVQARDPDD-GNNGLVTFSLTAGNPSGIFEIR 946
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
T + ++K +DRE+ L Y L ++A D G+PPR +
Sbjct: 947 T-----------------TNNTLGEVFLIKSIDREVQEL-YTLKVQASDSGSPPRRS 985
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS ++EN P G V+ + A DAD G+N ++SY + G F ID
Sbjct: 1541 NRPIFSPSSVTVHLRENSPPGFSVVKVTATDAD-SGINQQLSYRIESG-AQDRFLID--A 1596
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTL 103
R+ +D +K Y ++V+ D+ PL ++T+
Sbjct: 1597 FTGVIRVANVTVDR-EEKDTYKLIVVA-TDQGAVPLSGSITV 1636
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKEN-QPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N+PVF VY+ T E + ++++T A D D G N ++YS+ G+ F+I+N
Sbjct: 1106 NSPVFKSPVYEVTRDEGPLSLNSVILTTTAVDQD-EGPNGTVTYSISAGNVQETFSINNA 1164
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK 108
L I V+K LD E+ Y L + A D+
Sbjct: 1165 TGL--------------------IRVVKELDYEVCLGRYTLIVTATDR 1192
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL-GYFTI 57
N P+F Y ++EN+P V+ L+A D D N++I+YS+ YF I
Sbjct: 76 NMPIFQKESYLGAIRENEPSVVTVVKLRATDED-SAPNNQITYSILNASAFQSYFEI 131
>gi|195035917|ref|XP_001989418.1| GH11711 [Drosophila grimshawi]
gi|193905418|gb|EDW04285.1| GH11711 [Drosophila grimshawi]
Length = 5208
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 53/111 (47%), Gaps = 24/111 (21%)
Query: 4 PVFSDFVYQATVKENQ--PIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
P F D Y V EN P ++T+KA DAD P +NS++ Y ++ EG
Sbjct: 2420 PTFLDSPYITRVMENTLPPNDGYLLTVKAYDADTPPLNSQVRYFLK------------EG 2467
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ FRI IV+L+ LDRE+ Y LTL A+D G+PP
Sbjct: 2468 NADLFRI---------NASTGEIVLLRSLDRELQS-EYILTLVAMDTGSPP 2508
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 54/115 (46%), Gaps = 24/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y A ++EN PIG+LV+ A D D G+N+K+ +++ G + +
Sbjct: 2525 NGPVFELQYYHALIEENLPIGSLVLRPIATDKD-AGLNAKLRFNLLGEHMMDF------- 2576
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG-TPPRET 115
ID T + I +LDRE + Y+LTL A D T PR T
Sbjct: 2577 ----------HIDTDTGE----ITTATVLDRETIAI-YHLTLMAQDSSITEPRAT 2616
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F Y + + EN PIG V+T+ A D D G N I +S+ GGD F I++ G
Sbjct: 2056 NTPLFDPMSYSSEIFENVPIGVEVVTVSAKDID-SGNNGLIEFSITGGDADNDFGINSNG 2114
Query: 62 PL 63
+
Sbjct: 2115 TI 2116
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 22/103 (21%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
ATV EN GT+V + D+D G+N + + + G+ L+HFR+ T
Sbjct: 413 ATVDENASNGTVVAAVSVIDSDD-GLNGETTTRIISGN-----------ELHHFRLEKTP 460
Query: 73 IDPGTKKKEYNIV-VLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+ ++IV V +LDRE YNLT+ A+DKGTP R+
Sbjct: 461 L--------FHIVRVNGVLDREEIS-KYNLTVVAIDKGTPERK 494
Score = 42.7 bits (99), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ + +V E P GT ++ +A+DAD G+NS++ +S+ G+ F ID+
Sbjct: 1400 NAPEFTQSSSEISVLETSPSGTELMRFRASDAD-QGVNSQVVFSITAGNRRDTFHIDSVS 1458
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
++ + K LD E Y L + A D GTPP T
Sbjct: 1459 G--------------------SLYLHKSLDYEDI-TNYTLNITASDCGTPPLST 1491
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF Y A + E P G+ V ++ A D D G+N+++ Y + G+ L +F
Sbjct: 509 HEPVFEKSEYSAVLSELAPTGSFVASIAATDED-TGVNAQVYYEILTGNELKWF------ 561
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
IDP T IV LDRE+ L++ A D G P+ Y
Sbjct: 562 ----------NIDPATGL----IVTAGPLDREVQA-SVELSISARDGGPNPKFAY 601
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
P FS YQ V EN+PIG+ ++T+ A D D G N + Y++ GG+ F ++
Sbjct: 3266 PEFSALSYQVIVPENEPIGSTILTVSATDKD-NGPNGMLHYAISGGNERRDFNVN 3319
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N PVF Y A+V EN IG +V+ + A D D G N ++ YS+ GD F+I +
Sbjct: 2312 NIPVFDPKQYSASVAENASIGAMVLQVSATDED-EGDNGRVRYSIVTGDQNRDFSISED 2369
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 55/119 (46%), Gaps = 24/119 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y AT+ E+ +GT+V T+KA D D N++ SYS+ G+ F ID E
Sbjct: 3582 PEFVKRYYTATIIESATVGTVVTTVKAVDKDVRLQNNQFSYSIINGNIKQNFKIDAESG- 3640
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDRE-IAPLGYNLTLRAVDKGTPPRETYKATPR 121
I LLDRE IA YNL + A+D G PP +T AT R
Sbjct: 3641 -------------------EISTASLLDREDIA--HYNLVIGAIDTGLPP-QTGTATVR 3677
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P F+ + EN+P GT ++TL A+D D P SY + GG +ID
Sbjct: 3686 NGPTFTAEGLLGYISENEPAGTTIMTLAASDPDLPENGGPFSYRIVGGKHKSLLSID 3742
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTID 58
N P+F+ Y + EN+P+GT V A D D P N+ I YS + G +F+I+
Sbjct: 3369 NPPIFNQSEYHGYIAENKPVGTNVFQAHATDKDSP-KNAIIHYSFLASGTDHHFFSIN 3425
Score = 36.2 bits (82), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 46/114 (40%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF Y+ ++ E + T L A+D+D G N +ISY + G+ F + +G
Sbjct: 1059 HTPVFDHTSYETSLLETTKVNTRFFALAASDSD-LGANGRISYEIIDGNSDRKFGVFPDG 1117
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
L V LDRE Y LT+ D GTP R +
Sbjct: 1118 YL---------------------FVRATLDREERDY-YALTVSCSDAGTPSRSS 1149
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 45/110 (40%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PV +Y A + E + L++ +KA D D G N ++SY ++ D G F I + G
Sbjct: 2844 NPPVMEKLIYNAEILEEETPPQLIVAIKAKDKD-SGDNGEVSYRLK-NDYDGTFEIADSG 2901
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I LDRE Y L + AVD+G P
Sbjct: 2902 ---------------------EIYTTMRLDREEIS-DYALVVEAVDQGVP 2929
>gi|341899515|gb|EGT55450.1| hypothetical protein CAEBREN_29330 [Caenorhabditis brenneri]
Length = 2586
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y + EN PIG+ V T+ A DAD G NS IS+ + GG F I+ +
Sbjct: 878 NAPAFEQLSYDLYIAENAPIGSTVGTIVARDAD-EGDNSDISFRIFGGADAKLFDIEEDA 936
Query: 62 PLN 64
N
Sbjct: 937 EQN 939
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P+F Y ++E+ PIGT V+++ A D D G N +I YS+ G+G I+++
Sbjct: 256 NSPIFEKDSYFGEIREDAPIGTTVLSVFARDLD-SGENGEIEYSLGEGNGKSLLAINSKS 314
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I LDRE L L + A DKG P RE+
Sbjct: 315 GV--------------------IQTAAPLDRETLSL-IRLDVIASDKGVPKRES 347
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAPVF+ Y T+ EN + ++ T+KA D D G N K+ YS+ G+G TID
Sbjct: 361 NAPVFASDSYNVTILENITLPAVIATVKATDED-FGTNGKVHYSMASSSGIGGLTID 416
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 25/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+D ++ + E+ PIG VITLKA D D G N+++ YS+ D +F ID+
Sbjct: 668 SAPYFTDHLFSVKIPEHSPIGFPVITLKAEDHD-RGDNARLIYSI---DSTQFFKIDSAS 723
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+I V LDRE +++ + A D +PP T
Sbjct: 724 G--------------------DISVAADLDREDRAT-FSVIVTASDHASPPLNT 756
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
NAP+F Y T+ E P G+ +ITLKA D D + KI+Y + D
Sbjct: 567 NAPIFDKKEYNVTISEEMPRGSQIITLKAVDNDE---DQKITYRIEESD 612
Score = 38.5 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 17/122 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTID- 58
NAP F+ Y AT+ E+ P+GT + + A DAD P G+ + F +D
Sbjct: 770 NAPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPAIQLFRLDR 829
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE------IAPLGYNLTLRAVDKGTPP 112
G L V +K+D ++++ ++VL + R+ A LTL V+ P
Sbjct: 830 TSGTLR----VSSKLD----REQFAVIVLPIFARDRGNPSLSAASEITLTLSDVNDNAPA 881
Query: 113 RE 114
E
Sbjct: 882 FE 883
Score = 35.4 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 46/114 (40%), Gaps = 25/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP T++EN IG V + A D D G N I YS+ G + F ID
Sbjct: 465 HAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDS-GPNGIIRYSMEGSED---FIIDE-- 518
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
D G K KLLDRE Y+L + A D GTPP T
Sbjct: 519 ------------DSGVLK------TTKLLDRETVAR-YSLKVTARDMGTPPLNT 553
>gi|410951053|ref|XP_003982216.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 [Felis
catus]
Length = 3316
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 51/115 (44%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
NAP F Y V E+ P T V+ + A D D N ++ Y+ + G DG G FTI+
Sbjct: 957 NAPQFVASHYTGLVSEDAPPFTSVLQISATDRDAHA-NGRVQYTFQNGEDGDGDFTIEPT 1015
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ + ++ LDRE P+ Y LT AVD+G PP T
Sbjct: 1016 SGI--------------------VRTVRRLDREAVPV-YELTAYAVDRGVPPLRT 1049
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y + E+ +GT V+++ A D D NS ISY + GG+ F I +G
Sbjct: 752 NRPEFTMKEYHLRLNEDAAVGTTVVSVTAVDRDA---NSAISYQITGGNTRNRFAISTQG 808
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREI 94
+ +V + K++ Y +VL DR +
Sbjct: 809 GVG---LVTLALPLDYKQERYFKLVLTASDRAL 838
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS+ Y A V+E+ T+V+ + A D D N + Y++ G+ G+F ID+
Sbjct: 541 NAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDA-NGLVHYNIISGNSRGHFAIDS-- 597
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I V+ LD E A Y L +RA D G PP
Sbjct: 598 ------------------LTGEIQVVAPLDFE-AEREYALRIRAQDAGRPP 629
Score = 38.9 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF Y +V E++P+G+ V+ + A+D D G N++I+Y + D L F ID
Sbjct: 856 PVFQSAHYSVSVNEDRPVGSTVVVISASD-DDVGENARITYLLE--DNLPQFRID 907
Score = 38.9 bits (89), Expect = 0.75, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG 48
+ P+F +Q +V EN P+G VI ++A DAD G N+++ YS+ G
Sbjct: 647 HTPIFVSTPFQVSVLENAPLGHSVIHIQAVDAD-HGENARLEYSLTG 692
Score = 36.2 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAPVF ++ VKEN +G++V + A D D G N+ I Y + G+ F +D
Sbjct: 1063 NAPVFPAEEFEVRVKENSIVGSVVAQITAVDPD-EGPNAHIMYQIVEGNIPELFQMD 1118
>gi|355691239|gb|EHH26424.1| Kidney cadherin [Macaca mulatta]
gi|355749842|gb|EHH54180.1| Kidney cadherin [Macaca fascicularis]
gi|380808526|gb|AFE76138.1| cadherin-6 preproprotein [Macaca mulatta]
Length = 790
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P+F+ VY ATV E +GT V+ + A DAD P G ++K+ YS+ G YF++++
Sbjct: 155 NEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQ--PYFSVES 212
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTP--PR 113
E + + +D +++ ++ K + ++ L N+TL V+ P P+
Sbjct: 213 ETGI--IKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQ 270
Query: 114 ETYK 117
TY+
Sbjct: 271 STYQ 274
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ E+ P GT + +KA+DAD G N++I YS+ G+GL F + +
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDAD-VGENAEIEYSITDGEGLDMFDVITDQ 322
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
I K+ KKK Y + V
Sbjct: 323 ETQEGIITVKKLLDFEKKKVYTLKV 347
>gi|345786948|ref|XP_533840.3| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Canis lupus familiaris]
Length = 3438
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 51/115 (44%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
NAP F Y V E+ P T V+ + A D D N ++ Y+ + G DG G FTI+
Sbjct: 1079 NAPQFVASHYTGLVSEDAPPFTSVLQISATDRDAHA-NGRVQYTFQNGEDGDGDFTIEPT 1137
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ + ++ LDRE P+ Y LT AVD+G PP T
Sbjct: 1138 SGI--------------------VRTVRRLDREAVPV-YELTAYAVDRGVPPLRT 1171
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y + E+ +GT V+++ A D D NS ISY + GG+ F I +G
Sbjct: 874 NRPEFTMKEYHLRLNEDAAVGTTVVSVTAVDRDA---NSAISYQITGGNTRNRFAISTQG 930
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREI 94
+ +V + K++ Y +VL DR +
Sbjct: 931 GVG---LVTLALPLDYKQERYFKLVLTASDRAL 960
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS+ Y A V+E+ T+V+ + A D D N + Y++ G+ G+F ID+
Sbjct: 663 NAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDA-NGLVHYNIISGNSRGHFAIDS-- 719
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I V+ LD E A Y L +RA D G PP
Sbjct: 720 ------------------LTGEIQVVAPLDFE-AEREYALRIRAQDAGRPP 751
Score = 38.9 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF Y +V E++P+G+ V+ + A+D D G N++I+Y + D L F ID
Sbjct: 978 PVFQSAHYSVSVNEDRPVGSTVVVISASD-DDVGENARITYLLE--DNLPQFRID 1029
Score = 38.9 bits (89), Expect = 0.75, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG 48
+ P+F +Q +V EN P+G VI ++A DAD G N+++ YS+ G
Sbjct: 769 HTPIFVSTPFQVSVLENAPLGHSVIHIQAVDAD-HGENARLEYSLTG 814
Score = 36.2 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAPVF ++ VKEN +G++V + A D D G N+ I Y + G+ F +D
Sbjct: 1185 NAPVFPAEEFEVRVKENSIVGSVVAQITAVDPD-EGPNAHIMYQIVEGNIPELFQMD 1240
>gi|432879584|ref|XP_004073499.1| PREDICTED: uncharacterized protein LOC101171842 [Oryzias latipes]
Length = 8377
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 27/121 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG--GDGL-GYFTID 58
N PV + Y A ++EN PIGT VI + A D D G+N +++YS G D + +F I+
Sbjct: 7010 NMPVLTKDKYTAALRENSPIGTTVIQVNATDLD-DGINGEVTYSFGGEVKDKIREFFEIN 7068
Query: 59 NE-GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
++ G + IV ID +L DR +++ ++A DKG P TYK
Sbjct: 7069 SDTGEI----IVKGNID------------FELQDR------FDIDIQASDKGMTPLRTYK 7106
Query: 118 A 118
+
Sbjct: 7107 S 7107
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG 48
N PV Y TVKEN P GT ++T+ A+D+D G+NS+I YS+R
Sbjct: 1549 NPPVCDKQKYTVTVKENAPTGTYLLTVNASDSD-EGVNSEIEYSLRS 1594
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 19/111 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P+F+ +Y A + EN +G+ VIT+ A D D G+N+ + YS G + I
Sbjct: 2998 NSPIFTQEIYSAIINENIKVGSNVITVNATDLD-EGVNADVEYSFGGELDPQIYEI---- 3052
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
F I K I V +D E A + Y L + A DKG PP
Sbjct: 3053 ----FSI---------NKHSGEISVKGEIDFEKAEV-YKLDVHASDKGQPP 3089
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
N+PVF+ Y AT++EN PI T VI + A D D G N++I YS
Sbjct: 7799 NSPVFTKETYSATIRENIPIDTFVIQVNATDLD-KGANAEIVYS 7841
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 17/123 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y AT++EN PI T VI + A D D G N++I YS ++ NE
Sbjct: 5513 NSPVFTKETYSATIRENIPIDTGVIQVNAKDLD-KGANAEIVYSFE-----IVYSFGNE- 5565
Query: 62 PLNHFRIVPTKIDP--GTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
V +KI +K I V +D E + + Y + ++A DKG P + K+
Sbjct: 5566 -------VKSKITELFSINEKTGEITVKGQIDFEKSKI-YEIDVQASDKGPVPLTSDKSV 5617
Query: 120 PRN 122
N
Sbjct: 5618 KIN 5620
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 51/120 (42%), Gaps = 37/120 (30%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS +YQ ++EN +GT V + A D D G N ++ YS+
Sbjct: 6293 NRPIFSQEIYQVEIRENASVGTSVARVNATDPD-QGSNGEVEYSLS-------------- 6337
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG---------YNLTLRAVDKGTPP 112
+++P K+ Y+I L + EI G Y L ++A DKG PP
Sbjct: 6338 -----KMLPRKV--------YDIFDLDISSGEIKLKGDLDFEESETYKLDIQASDKGQPP 6384
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
N P F +Y + EN PIG+LV+ L A D+D G NS I+YS
Sbjct: 413 NKPTFDKSLYNVKIMENSPIGSLVLHLNATDSD-EGSNSDITYS 455
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 19/111 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y+ T++EN P+ T+++T+ A+D D G N +I YS G L +
Sbjct: 4725 NRPVFTQESYEITLQENIPLNTVILTMNASDLD-EGTNGEIEYSF--GKTL------KKR 4775
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
F++ +K I V +D E + Y L + A DKGTPP
Sbjct: 4776 VYEAFQL---------DRKTGEIRVKGTVDFEETDV-YKLDVEASDKGTPP 4816
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 46/120 (38%), Gaps = 37/120 (30%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS VY ++ EN +GTLVI L A D D G N I Y+
Sbjct: 2232 NRPVFSKDVYTVSLNENAALGTLVIKLNATDLD-EGSNGDIEYT---------------- 2274
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG---------YNLTLRAVDKGTPP 112
+KK + + L + EI G Y L ++A DKG PP
Sbjct: 2275 -----------FGKTQRKKAHEVFELDRVTGEIRVKGNVDFEETELYRLDVQASDKGQPP 2323
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
NAP F Y V EN PIG+LVI L A D D G N+ + YS
Sbjct: 971 NAPSFDKDTYVVDVMENSPIGSLVIKLNATDLD-EGSNADVVYS 1013
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 21/101 (20%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
+ ++KE+ IGT V + D+D G+N K+ +++ + VP
Sbjct: 7916 FSNSIKEDSKIGTTVALISIRDSD-SGINGKVICTIK-------------------QDVP 7955
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ P K+ + +V + LDRE P Y++T+ A D G P
Sbjct: 7956 FTLSPSLKENMFAVVSMSQLDRENTP-HYDVTIIAKDSGDP 7995
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 21/101 (20%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
+ ++KE+ IGT V + D+D G+N K+ +++ + VP
Sbjct: 5636 FSNSIKEDSKIGTTVALISVRDSD-SGINGKVICTIK-------------------QDVP 5675
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ P ++ + +V + LDRE P Y++T+ A D G P
Sbjct: 5676 FTLSPSLQENMFAVVSMSQLDRENTP-HYDVTIIAKDSGDP 5715
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 21/117 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP ++ E+ + T++ + D D G+N KI I+N+
Sbjct: 6401 NAPEIDVKSLSDSISEDSKLDTVIALISVTDKDS-GLNGKI-----------LLNINND- 6447
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKA 118
VP + P K+ Y+IV + LDRE Y + ++A D G PP T K+
Sbjct: 6448 -------VPFSLKPSYKENVYSIVTKEDLDRE-KEKQYTIKIKATDCGKPPLATLKS 6496
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 48/113 (42%), Gaps = 20/113 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Q + E+ P+G AAD D G NS Y + +
Sbjct: 862 NAPHFRRGTMQLDISESSPVGERFSLNNAADPD-VGTNSVKDYHLSASE----------- 909
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKL-LDREIAPLGYNLTLRAVDKGTPPR 113
HF I +I G ++ ++LK LDRE + + LTL AVD G P R
Sbjct: 910 ---HFSI---EIQTGRDGSKFADLILKKPLDREQRAV-HTLTLTAVDGGVPTR 955
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 21/104 (20%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKI 73
TV E+ GT++ L D D G+N KI ++ DG P ++
Sbjct: 4845 TVSEDSKPGTVISLLSVTDKDS-GLNGKILTDIQT-DG------------------PFEL 4884
Query: 74 DPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
P K+ Y++ +LDRE P Y + ++A D G P ++K
Sbjct: 4885 KPSYKENIYSVTTKDILDREKVP-HYEIIVKATDCGDPSLSSFK 4927
>gi|344236025|gb|EGV92128.1| Cadherin EGF LAG seven-pass G-type receptor 3 [Cricetulus griseus]
Length = 3109
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 51/115 (44%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
NAP F Y V E+ P T V+ + A D D N ++ Y+ + G DG G FTI+
Sbjct: 878 NAPQFVASHYTGLVSEDAPPFTSVLQISATDRDAHA-NGRVQYTFQNGEDGDGDFTIEPT 936
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ + ++ LDRE P+ Y LT AVD+G PP T
Sbjct: 937 SGI--------------------VRTVRRLDREAVPV-YELTAYAVDRGVPPLRT 970
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG 48
+AP+F +Q +V EN P+G VI ++A DAD G NS++ YS+ G
Sbjct: 568 HAPIFVSTPFQVSVLENAPLGHSVIHIQAVDAD-HGENSRLEYSLTG 613
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y + E+ +GT V+++ A D D NS ISY + GG+ F I +G
Sbjct: 673 NRPEFTMKEYHLRLNEDAAVGTSVVSVTAVDRDA---NSAISYQITGGNSRNRFAISTQG 729
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREI 94
+ +V + K++ Y +VL DR +
Sbjct: 730 GVG---LVTLALPLDYKQERYFKLVLTASDRAL 759
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NEGP 62
PVF Y ++ E++P+G+ V+ + A+D D G N++I+Y + D L F ID N G
Sbjct: 777 PVFQSAHYSVSMNEDRPVGSTVVVISASD-DDVGENARITYLLE--DNLPQFRIDANSGA 833
Query: 63 L 63
+
Sbjct: 834 I 834
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 48/111 (43%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS+ Y A V+E+ T+V+ + A D D N + Y++ G+ G+F ID+
Sbjct: 462 NTPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDA-NGLVHYNIISGNSRGHFAIDS-- 518
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I V+ LD E A Y L +RA D G PP
Sbjct: 519 ------------------LTGEIQVVAPLDFE-AEREYVLRIRAQDAGRPP 550
Score = 36.2 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAPVF ++ VKEN +G++V + A D D G N+ I Y + G+ F +D
Sbjct: 984 NAPVFPAEEFEVRVKENSIVGSVVAQITAVDPD-EGPNAHIMYQIVEGNIPELFQMD 1039
>gi|350594189|ref|XP_003359784.2| PREDICTED: cadherin-6-like [Sus scrofa]
Length = 790
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P+F+ VY ATV E +GT V+ + A DAD P G ++K+ YS+ G YF++++
Sbjct: 155 NEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQ--PYFSVES 212
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTP--PR 113
E + + +D +++ ++ K + ++ L N+TL V+ P P+
Sbjct: 213 ETGI--IKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQ 270
Query: 114 ETYK 117
TY+
Sbjct: 271 STYQ 274
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ E+ P GT + +KA+DAD G N++I YS+ G+GL F + +
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDADM-GENAEIEYSITEGEGLDMFDVITDQ 322
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
I KI KKK Y + V
Sbjct: 323 ETQEGIITVKKILDFEKKKVYTLKV 347
>gi|291393635|ref|XP_002713434.1| PREDICTED: anchor protein-like [Oryctolagus cuniculus]
Length = 3307
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 51/115 (44%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
NAP F Y V E+ P T V+ + A D D N ++ Y+ + G DG G FTI+
Sbjct: 954 NAPQFVASHYTGLVSEDAPPFTSVLQISATDRDAHA-NGRVQYTFQNGEDGDGDFTIEPT 1012
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ + ++ LDRE P+ Y LT AVD+G PP T
Sbjct: 1013 SGI--------------------VRTVRRLDREAVPV-YELTAYAVDRGVPPLRT 1046
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG 48
+AP+F +Q +V EN P+G VI ++A DAD G N+++ YS+ G
Sbjct: 644 HAPIFVSTPFQVSVLENAPLGHSVIHIQAVDAD-HGENARLEYSLTG 689
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y + E+ +GT V+++ A D D NS ISY + GG+ F I +G
Sbjct: 749 NRPEFTMKEYHLRLNEDAAVGTSVVSVTAVDRDA---NSAISYQITGGNTRNRFAISTQG 805
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREI 94
+ +V + K++ Y +VL DR +
Sbjct: 806 GVG---LVTLALPLDYKQERYFKLVLTASDRAL 835
Score = 39.3 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS+ Y A V+E+ T+V+ + A D D N + Y++ G+ G+F ID+
Sbjct: 538 NAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDA-NGLVHYNIISGNSRGHFAIDS-- 594
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I V+ LD E A Y L +RA D G PP
Sbjct: 595 ------------------LTGEIQVVAPLDFE-AEREYALRIRAQDAGRPP 626
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 24/110 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF Y ++ E++P+G+ V+ + A+D D G N++I+ YF DN L
Sbjct: 853 PVFQSAHYSVSMNEDRPVGSTVVVISASD-DDVGENARIT----------YFLEDN---L 898
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
FRI D G I + LD E + Y L + A D G P +
Sbjct: 899 PQFRI---NADSGA------ITLQAPLDYE-DQVTYTLAITARDNGIPQK 938
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAPVF ++ VKEN +G++V + A D D G N+ I Y + G+ F +D
Sbjct: 1060 NAPVFPAEEFEVRVKENSIVGSVVAQITAVDPD-EGPNAHIMYQIVDGNIPELFQMD 1115
>gi|148689370|gb|EDL21317.1| cadherin EGF LAG seven-pass G-type receptor 3, isoform CRA_b [Mus
musculus]
Length = 3301
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 51/115 (44%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
NAP F Y V E+ P T V+ + A D D N ++ Y+ + G DG G FTI+
Sbjct: 948 NAPQFVASHYTGLVSEDAPPFTSVLQISATDRDAHA-NGRVQYTFQNGEDGDGDFTIEPT 1006
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ + ++ LDRE P+ Y LT AVD+G PP T
Sbjct: 1007 SGI--------------------VRTVRRLDREAVPV-YELTAYAVDRGVPPLRT 1040
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG 48
+AP+F +Q +V EN P+G VI ++A DAD G NS++ YS+ G
Sbjct: 638 HAPIFVSTPFQVSVLENAPLGHSVIHIQAVDAD-HGENSRLEYSLTG 683
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS+ Y A V+E+ T+V+ + A D D N + Y++ G+ G+F ID+
Sbjct: 532 NAPQFSEKRYVAQVREDVRPHTVVLRVTATDKDKDA-NGLVHYNIISGNSRGHFAIDS-- 588
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I V+ LD E A Y L +RA D G PP
Sbjct: 589 ------------------LTGEIQVMAPLDFE-AEREYALRIRAQDAGRPP 620
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y + E+ +GT V+++ A D D NS ISY + GG+ F I +G
Sbjct: 743 NRPEFTMKEYHLRLNEDAAVGTSVVSVTAVDRDA---NSAISYQITGGNTRNRFAISTQG 799
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREI 94
+ +V + K++ Y +VL DR +
Sbjct: 800 GVG---LVTLALPLDYKQERYFKLVLTASDRAL 829
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF Y ++ E++P+G+ V+ + A+D D G N++I+Y + D L F ID
Sbjct: 847 PVFQSAHYSVSMNEDRPVGSTVVVISASD-DDVGENARITYLLE--DNLPQFRID 898
Score = 35.8 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAPVF ++ VKEN +G++V + A D D G N+ I Y + G+ F +D
Sbjct: 1054 NAPVFPAEEFEVRVKENSIVGSVVAQITAVDPD-DGPNAHIMYQIVEGNIPELFQMD 1109
>gi|148689369|gb|EDL21316.1| cadherin EGF LAG seven-pass G-type receptor 3, isoform CRA_a [Mus
musculus]
Length = 3302
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 51/115 (44%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
NAP F Y V E+ P T V+ + A D D N ++ Y+ + G DG G FTI+
Sbjct: 948 NAPQFVASHYTGLVSEDAPPFTSVLQISATDRDAHA-NGRVQYTFQNGEDGDGDFTIEPT 1006
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ + ++ LDRE P+ Y LT AVD+G PP T
Sbjct: 1007 SGI--------------------VRTVRRLDREAVPV-YELTAYAVDRGVPPLRT 1040
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG 48
+AP+F +Q +V EN P+G VI ++A DAD G NS++ YS+ G
Sbjct: 638 HAPIFVSTPFQVSVLENAPLGHSVIHIQAVDAD-HGENSRLEYSLTG 683
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS+ Y A V+E+ T+V+ + A D D N + Y++ G+ G+F ID+
Sbjct: 532 NAPQFSEKRYVAQVREDVRPHTVVLRVTATDKDKDA-NGLVHYNIISGNSRGHFAIDS-- 588
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I V+ LD E A Y L +RA D G PP
Sbjct: 589 ------------------LTGEIQVMAPLDFE-AEREYALRIRAQDAGRPP 620
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y + E+ +GT V+++ A D D NS ISY + GG+ F I +G
Sbjct: 743 NRPEFTMKEYHLRLNEDAAVGTSVVSVTAVDRDA---NSAISYQITGGNTRNRFAISTQG 799
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREI 94
+ +V + K++ Y +VL DR +
Sbjct: 800 GVG---LVTLALPLDYKQERYFKLVLTASDRAL 829
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF Y ++ E++P+G+ V+ + A+D D G N++I+Y + D L F ID
Sbjct: 847 PVFQSAHYSVSMNEDRPVGSTVVVISASD-DDVGENARITYLLE--DNLPQFRID 898
Score = 35.8 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAPVF ++ VKEN +G++V + A D D G N+ I Y + G+ F +D
Sbjct: 1054 NAPVFPAEEFEVRVKENSIVGSVVAQITAVDPD-DGPNAHIMYQIVEGNIPELFQMD 1109
>gi|13786140|ref|NP_112610.1| cadherin EGF LAG seven-pass G-type receptor 3 precursor [Rattus
norvegicus]
gi|22095544|sp|O88278.1|CELR3_RAT RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 3; AltName:
Full=Multiple epidermal growth factor-like domains
protein 2; Short=Multiple EGF-like domains protein 2;
Flags: Precursor
gi|3449288|dbj|BAA32459.1| MEGF2 [Rattus norvegicus]
Length = 3313
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 51/115 (44%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
NAP F Y V E+ P T V+ + A D D N ++ Y+ + G DG G FTI+
Sbjct: 948 NAPQFVASHYTGLVSEDAPPFTSVLQISATDRDAHA-NGRVQYTFQNGEDGDGDFTIEPT 1006
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ + ++ LDRE P+ Y LT AVD+G PP T
Sbjct: 1007 SGI--------------------VRTVRRLDREAVPV-YELTAYAVDRGVPPLRT 1040
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y + E+ +GT V+++ A D D NS ISY + GG+ F I +G
Sbjct: 743 NRPEFTMKEYHLRLNEDAAVGTSVVSVTAVDRDA---NSAISYQITGGNTRNRFAISTQG 799
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREI 94
+ +V + K++ Y +VL DR +
Sbjct: 800 GMG---LVTLALPLDYKQERYFKLVLTASDRAL 829
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG 48
++P+F +Q +V EN P+G VI ++A DAD G NS++ YS+ G
Sbjct: 638 HSPIFVSTPFQVSVLENAPLGHSVIHIQAVDAD-HGENSRLEYSLTG 683
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS+ Y A V+E+ T+V+ + A D D N + Y++ G+ G+F ID+
Sbjct: 532 NAPQFSEKRYVAQVREDVRPHTVVLRVTATDKDKDA-NGLVHYNIISGNSRGHFAIDS-- 588
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I V+ LD E A Y L +RA D G PP
Sbjct: 589 ------------------LTGEIQVMAPLDFE-AEREYALRIRAQDAGRPP 620
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF Y ++ E++P+G+ V+ + A+D D G N++I+Y + D L F ID
Sbjct: 847 PVFQSAHYSVSMNEDRPVGSTVVVISASD-DDVGENARITYLLE--DNLPQFRID 898
Score = 35.8 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAPVF ++ VKEN +G++V + A D D G N+ I Y + G+ F +D
Sbjct: 1054 NAPVFPAEEFEVRVKENSIVGSVVAQITAVDPD-DGPNAHIMYQIVEGNIPELFQMD 1109
>gi|16518999|gb|AAL25099.1|AF427498_1 cadherin EGF LAG seven-pass G-type receptor [Mus musculus]
Length = 3301
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 51/115 (44%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
NAP F Y V E+ P T V+ + A D D N ++ Y+ + G DG G FTI+
Sbjct: 948 NAPQFVASHYTGLVSEDAPPFTSVLQISATDRDAHA-NGRVQYTFQNGEDGDGDFTIEPT 1006
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ + ++ LDRE P+ Y LT AVD+G PP T
Sbjct: 1007 SGI--------------------VRTVRRLDREAVPV-YELTAYAVDRGVPPLRT 1040
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG 48
+AP+F +Q +V EN P+G VI ++A DAD G NS++ YS+ G
Sbjct: 638 HAPIFVSTPFQVSVLENAPLGHSVIHIQAVDAD-HGENSRLEYSLTG 683
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y + E+ +GT V+++ A D D NS ISY + GG+ F I +G
Sbjct: 743 NRPEFTMKEYHLRLNEDAAVGTSVVSVTAVDRDA---NSAISYQITGGNTRNRFAISTQG 799
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREI 94
+ +V + K++ Y +VL DR +
Sbjct: 800 GVG---LVTLALPLDYKQERYFKLVLTASDRAL 829
Score = 38.1 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 48/111 (43%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F + Y A V+E+ T+V+ + A D D N + Y++ G+ G+F ID+
Sbjct: 532 NAPQFGEKRYVAQVREDVRPHTVVLRVTATDKDKDA-NGLVHYNIISGNSRGHFAIDS-- 588
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I V+ LD E A Y L +RA D G PP
Sbjct: 589 ------------------LTGEIQVMAPLDFE-AEREYALRIRAQDAGRPP 620
Score = 37.4 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF Y ++ E++P+G+ V+ + A+D D G N++I+Y + D L F ID
Sbjct: 847 PVFQSAHYSVSMNEDRPVGSTVVVISASD-DDVGENARITYLLE--DNLPQFRID 898
Score = 35.8 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAPVF ++ VKEN +G++V + A D D G N+ I Y + G+ F +D
Sbjct: 1054 NAPVFPAEEFEVRVKENSIVGSVVAQITAVDPD-DGPNAHIMYQIVEGNIPELFQMD 1109
>gi|125719165|ref|NP_536685.2| cadherin EGF LAG seven-pass G-type receptor 3 precursor [Mus
musculus]
gi|341940343|sp|Q91ZI0.2|CELR3_MOUSE RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 3; Flags:
Precursor
Length = 3301
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 51/115 (44%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
NAP F Y V E+ P T V+ + A D D N ++ Y+ + G DG G FTI+
Sbjct: 948 NAPQFVASHYTGLVSEDAPPFTSVLQISATDRDAHA-NGRVQYTFQNGEDGDGDFTIEPT 1006
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ + ++ LDRE P+ Y LT AVD+G PP T
Sbjct: 1007 SGI--------------------VRTVRRLDREAVPV-YELTAYAVDRGVPPLRT 1040
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG 48
+AP+F +Q +V EN P+G VI ++A DAD G NS++ YS+ G
Sbjct: 638 HAPIFVSTPFQVSVLENAPLGHSVIHIQAVDAD-HGENSRLEYSLTG 683
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y + E+ +GT V+++ A D D NS ISY + GG+ F I +G
Sbjct: 743 NRPEFTMKEYHLRLNEDAAVGTSVVSVTAVDRDA---NSAISYQITGGNTRNRFAISTQG 799
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREI 94
+ +V + K++ Y +VL DR +
Sbjct: 800 GVG---LVTLALPLDYKQERYFKLVLTASDRAL 829
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS+ Y A V+E+ T+V+ + A D D N + Y++ G+ G+F ID+
Sbjct: 532 NAPQFSEKRYVAQVREDVRPHTVVLRVTATDKDKDA-NGLVHYNIISGNSRGHFAIDS-- 588
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I V+ LD E A Y L +RA D G PP
Sbjct: 589 ------------------LTGEIQVMAPLDFE-AEREYALRIRAQDAGRPP 620
Score = 37.4 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF Y ++ E++P+G+ V+ + A+D D G N++I+Y + D L F ID
Sbjct: 847 PVFQSAHYSVSMNEDRPVGSTVVVISASD-DDVGENARITYLLE--DNLPQFRID 898
Score = 35.8 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAPVF ++ VKEN +G++V + A D D G N+ I Y + G+ F +D
Sbjct: 1054 NAPVFPAEEFEVRVKENSIVGSVVAQITAVDPD-DGPNAHIMYQIVEGNIPELFQMD 1109
>gi|170584276|ref|XP_001896931.1| Cadherin domain containing protein [Brugia malayi]
gi|158595708|gb|EDP34239.1| Cadherin domain containing protein [Brugia malayi]
Length = 2348
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F Y A ++E+ PIGT + ++ A D D G+N +I+YS+ DG I N
Sbjct: 257 NAPIFERNSYYAEIREDAPIGTTLASVFARDLD-IGLNGEITYSLGEEDGAKLLQIHNST 315
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I LDRE+ + + + A DKG PP
Sbjct: 316 GV--------------------IQTAHYLDRELMNI-IRIYVYATDKGVPP 345
Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 21/115 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y + E+ P GT + A D D G N+ I Y+ I+ G
Sbjct: 773 NAPEFTSENYTVAIAEDTPTGTSFTQVSAVDMD-EGDNAIID----------YYLIEENG 821
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
N F++ + + V+ LDRE+ Y LT++A D+G PP ++
Sbjct: 822 NGNTFKL---------DRSSGTLRVVSKLDREMIAR-YELTVKAQDRGNPPLSSF 866
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
NAPVF + T+ EN I + ++ +KA+D+D G N K+ YS+ G F+ID E
Sbjct: 362 NAPVFEQKLCNTTIMENITIPSNILQIKASDSD-SGQNGKVHYSIVASSVNG-FSIDYES 419
Query: 61 GPLNHFRIVPTKIDPGT 77
G + + + ++ +P T
Sbjct: 420 GWIKLHQKLDSRFNPAT 436
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP F Y + EN PIGT + T+ A D D G N+ I + + GG F I+ +
Sbjct: 880 APQFESLRYDLWIAENSPIGTTIGTIIARDQD-EGDNALIQFRIFGGVDAKLFDIETDSS 938
Query: 63 LN 64
N
Sbjct: 939 QN 940
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
APVF + + EN PIG+ VI +KA D D N+K++YS+ + F+ID
Sbjct: 673 APVFLTHPFTVHISENIPIGSEVIQVKAEDEDRHD-NAKLTYSIDSKE----FSID 723
>gi|410910412|ref|XP_003968684.1| PREDICTED: protocadherin-16-like [Takifugu rubripes]
Length = 3253
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 18/108 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF VY ++KEN GT ++ + A DAD S ISYS+ G I +
Sbjct: 572 NEPVFERNVYNVSIKENTAPGTCILEVTARDADGGSFGS-ISYSLSSG-------IKSAS 623
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
P + F I K+ I +LDR+ P ++ T+ AVD G
Sbjct: 624 P-SQFTI---------GKETGQICTTAVLDRDHGPASFDFTVTAVDGG 661
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 20/119 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN-- 59
NAP+F Y+A++ E+ G+ ++TL+A D D N +++ G+ F I++
Sbjct: 2441 NAPIFHQLEYRASLSEDDVPGSAILTLEAVDGDVNRENCGFDFAIASGNSGNTFQIESSV 2500
Query: 60 ---EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
EG + F+ V + +++++ LD E A YNLT+ D+G P R +
Sbjct: 2501 RYLEG--HGFQTVGS------------LILVEELDYE-AVASYNLTVVVSDRGIPQRSS 2544
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP F+ VYQ TV E+ P G+ VIT+ A D D G N KI+Y V G F ID
Sbjct: 2336 NAPTFTQDVYQVTVSEHLPAGSAVITVTATDRD-SGDNGKITYRVMSSTK-GIFYID 2390
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 25/117 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N PVF +V E+QP+G + + + A DAD G N +++Y ++ G+ G F+++ N
Sbjct: 1530 NPPVFRSPA-SVSVMEDQPVGFVTLYVMATDAD-EGENGRVTYRIQSGNTGGKFSLNPNT 1587
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
G L+ + K LDRE + +NLT+ A D G P R + +
Sbjct: 1588 GSLS---------------------IFKPLDREDQDI-FNLTIIAEDHGIPQRSSTQ 1622
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 53/125 (42%), Gaps = 40/125 (32%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F + Y+A + EN+P GT V+T+ A+D D G N +++Y
Sbjct: 1636 PWFEETQYEAQISENRPSGTEVLTVSASDLD-QGPNGQVTYG------------------ 1676
Query: 64 NHFRIVPTKIDPGTKKKEYN-------IVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
G +K++N I K LDRE+ Y +T+ A D G PP
Sbjct: 1677 ------------GIAEKDFNINPVTGVITTTKSLDRELQEY-YTVTVYAKDGGLPPNYA- 1722
Query: 117 KATPR 121
KAT R
Sbjct: 1723 KATVR 1727
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 48/111 (43%), Gaps = 25/111 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN-E 60
NAPVF Y V EN L TL+A D D G ++ I+Y + GD G F +D
Sbjct: 1736 NAPVFGRLYYNIEVPENLDAMPL-FTLRANDQDT-GESAIINYKISAGDLAGDFHLDRMS 1793
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
G L+ R LDRE+ GY LT+ A D+G P
Sbjct: 1794 GVLSTSR---------------------PLDREMR-TGYTLTITAQDQGHP 1822
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 46/110 (41%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y A ++E Q +I + A D D G N ++ YS+R G F
Sbjct: 2131 NLPRFQLQNYVAYIREAQGYDFPIIQVAAVDLDQ-GQNGQVIYSLRSSSMSGLF------ 2183
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
KIDP T +I ++DREI L + A D+GTP
Sbjct: 2184 ----------KIDPLTG----SITTAAIMDREIW-TETKLVVTATDRGTP 2218
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTID 58
NAPVF+ Y A + EN G+ ++ + A D D G N K+ Y + R D YF +D
Sbjct: 248 NAPVFNQSRYHAIISENLQPGSNILQVFATD-DDEGDNGKVLYEINRRQSDPDHYFLVD 305
>gi|348525438|ref|XP_003450229.1| PREDICTED: protocadherin-16-like [Oreochromis niloticus]
Length = 3282
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 58/122 (47%), Gaps = 26/122 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y+ + ENQP GT V+T+ AAD D G N +++Y DG I EG
Sbjct: 1641 PWFEQSQYEVEISENQPPGTSVLTVSAADLD-QGSNGQVTY-----DG-----ISQEG-- 1687
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPRNG 123
F I P G I++ K LDRE+ Y +T+ A D G PP KAT R
Sbjct: 1688 --FSINPVS---GV------IMITKSLDRELQEY-YTVTVSAKDGGLPPNYA-KATVRIK 1734
Query: 124 LT 125
+T
Sbjct: 1735 VT 1736
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 10/114 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F Y+ATV E+ G+ V+ L+A D D N +++ G+ F I++
Sbjct: 2467 NAPIFHQSEYRATVSEDGLPGSTVLILEAVDGDLLRDNCGFDFAIASGNSGNAFQIESSV 2526
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
R T ++++++ LD E P YNLT+ D+G P R +
Sbjct: 2527 RFLEGRGFQTV---------GSLILVEKLDFEAVP-SYNLTVVVSDRGIPQRSS 2570
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 18/108 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y +++EN GT ++ + AADAD G I+YS+ G G+
Sbjct: 575 NEPVFERNFYNVSIEENTGPGTCILEVTAADAD-SGSFGLITYSL--GSGIN-------- 623
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
VP++ G K+ I LDR+ P ++ T+ AVD G
Sbjct: 624 -----SAVPSQFTIG--KETGQICTTAALDRDQGPASFDFTVTAVDGG 664
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 22/104 (21%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKI 73
+V E+QP+G +V+ + A DAD G N +++Y ++ G+ G F+ +
Sbjct: 1546 SVMEDQPVGFVVLYVMARDAD-QGENGRVTYRIQSGNTAGTFS----------------L 1588
Query: 74 DPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+P T ++ + K LDRE + +NLT+ A D G P + +
Sbjct: 1589 NPSTG----SLSIFKPLDREEQDI-FNLTVIAEDHGIPQHSSIQ 1627
Score = 42.4 bits (98), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 49/111 (44%), Gaps = 23/111 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y V EN L TL+A D D G N +I+Y + GD G F +D +
Sbjct: 1741 NPPVFGRLYYSIEVPENLEALPL-FTLRATDQDA-GDNGRINYKITAGDPSGDFRLDGQS 1798
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ + + LDRE P GY+LT+ A D+G PP
Sbjct: 1799 GV--------------------LSTSRPLDREKRP-GYSLTVIAQDQGHPP 1828
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+P F+ +YQ V E+ P G+ VIT+ A D D G N KI+Y V G F ID
Sbjct: 2362 NSPTFTQDLYQVAVSEHLPAGSAVITVTATDRD-SGDNGKITYRVMSSTK-GVFYID 2416
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF Y TV E+ GT+V ++A+ G + ISY++ GD GYFT+D
Sbjct: 789 PVFEKTQYYFTVSEDVLRGTVVGIVQASSK--TGTSRDISYTISSGDPAGYFTVD 841
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N PVFS Y + E GT ++ L A D D NS++ YS+ GD F +D
Sbjct: 2584 NPPVFSRTEYSVILSEGTAAGTEILHLSATDPD-SAPNSEVRYSISSGDETNLFHVDQ 2640
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y A ++E Q +I + A D D G N +++YS+R G F
Sbjct: 2157 NLPRFQLQNYVAYIREAQGYDFPIIQVAADDRDQ-GQNGQVTYSIRSSSMSGLF------ 2209
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
KIDP T ++ ++DREI L + A D+GTP
Sbjct: 2210 ----------KIDPLTG----SVTTAAIMDREIW-TQTKLVVTATDRGTP 2244
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F Y A + E+ PIG+LV+ +KA D D G NS++ Y + G + N G
Sbjct: 1845 HSPQFQSSSYTAEILEDVPIGSLVLEVKAIDLD-HGPNSQVLYFLSHGSQSMFMIDQNTG 1903
>gi|61162138|dbj|BAD91057.1| Le-cadherin [Ligia exotica]
Length = 3009
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 51/110 (46%), Gaps = 17/110 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
NAP+F VY V EN G +V+T+ A D D P G N+K+SYS+ ID
Sbjct: 1551 NAPIFPQMVYYGNVTENGTQGMVVMTMTAEDYDDPNEGTNAKLSYSIEKN------VIDE 1604
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
F I P + G K + LDRE P Y++ + AVD G
Sbjct: 1605 STATPIFEIEP---ETGVIK-----TAVCCLDREKTP-DYSIQVVAVDGG 1645
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 27/114 (23%)
Query: 2 NAPVFSDFVYQA-TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F YQA + E+ PIG+ ++ +KA D D G N++I YSV +F +DN+
Sbjct: 676 NPPKFDLPDYQAHNIDEDIPIGSSILRVKAKD-DDAGTNAEIVYSVSDE----HFRVDNK 730
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
G + YN K LD + Y T+ A+D+G PP+E
Sbjct: 731 GII------------------YND---KTLDADDNNAYYEFTVTAIDRGEPPKE 763
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNE 60
N P F + V EN +G + KA D D G NSK+SY++ R D FTID+
Sbjct: 1782 NKPQFIKPNIEVPVFENAEVGKNLEQFKAEDPDQGG-NSKVSYAIDRASDRRRQFTIDDT 1840
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
G + + + LDRE P +++ + A+D GTP +
Sbjct: 1841 G---------------------TVKIQRSLDREENPR-HSVKILAIDDGTPAK 1871
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 10/71 (14%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN-- 59
N P F +Y+A V EN+ I V+T+ A D D +S+I Y + G+ G F + N
Sbjct: 1335 NLPYFDKTLYEAEVDENEDIQHTVLTVTAKDLDE---SSRIRYEITNGNIGGAFAVKNMT 1391
Query: 60 -----EGPLNH 65
GPL++
Sbjct: 1392 GAIYVAGPLDY 1402
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 2 NAPVFSDFV-YQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N PVF+D Y A V+E+ P G+ VIT+ A D D G N ++ YS+
Sbjct: 888 NKPVFTDCASYHAKVEESAPNGSPVITVHATDEDKGG-NGQVRYSI 932
>gi|45383842|ref|NP_989465.1| cadherin-20 precursor [Gallus gallus]
gi|82244296|sp|Q8QGH3.1|CAD20_CHICK RecName: Full=Cadherin-20; AltName: Full=F-cadherin; AltName:
Full=MN-cadherin; Flags: Precursor
gi|19698397|gb|AAL93123.1|AF459439_1 MN-cadherin [Gallus gallus]
Length = 798
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 12/126 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P F D Y A+V E P+GT VI + A DAD P G ++++ YS+ G YF++D+
Sbjct: 160 NEPKFLDGPYVASVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQ--PYFSVDS 217
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTP--PR 113
L R +D K+ IV K + ++ L N+TL V+ P P+
Sbjct: 218 RTGL--IRTALMNMDREAKEYYEVIVQAKDMGGQLGGLAGTTTVNITLSDVNDNPPRFPQ 275
Query: 114 ETYKAT 119
+ Y+ +
Sbjct: 276 KHYQMS 281
Score = 39.7 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F YQ +V E+ P+ + V + A D D G+N+++ YS+ GDGL F I+ +
Sbjct: 269 NPPRFPQKHYQMSVLESAPVSSTVGRVVAKDLDE-GINAEMKYSLVDGDGLDVFDINTD 326
>gi|345311060|ref|XP_001510399.2| PREDICTED: LOW QUALITY PROTEIN: cadherin-20 [Ornithorhynchus
anatinus]
Length = 795
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 12/126 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P F D Y ATV E P+GT VI + A DAD P G ++++ YS+ G YF++D+
Sbjct: 154 NEPRFPDGPYVATVAEMSPVGTSVIQVTATDADDPSYGSSARVVYSILQGQ--PYFSVDS 211
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTP--PR 113
+ L R +D K+ I+ K + ++ L N++L V+ P P+
Sbjct: 212 KTGL--IRTALMNMDREAKESYEVIIQAKDMGGQLGGLAGTATVNISLSDVNDNPPRFPQ 269
Query: 114 ETYKAT 119
+ Y+ +
Sbjct: 270 KHYQMS 275
Score = 39.3 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F YQ +V E+ P+ + V + A D D G+N++++YS+ GDGL F I +
Sbjct: 263 NPPRFPQKHYQMSVSESAPVSSTVGRVFAKDPDE-GINAEMTYSLLEGDGLDAFDISTD 320
>gi|332259108|ref|XP_003278631.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1, partial
[Nomascus leucogenys]
Length = 2923
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 24/110 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF Y +V E++P+GT + TL A D D G N++I+Y + + P+
Sbjct: 682 PVFQSSHYTVSVSEDRPVGTSIATLSANDED-TGENARITYVI-------------QDPV 727
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
FRI P D GT + + LD E + Y LT+ A D G P +
Sbjct: 728 PQFRIDP---DSGT------MYTMMELDYE-NQVAYTLTIMAQDNGIPQK 767
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F +QATV EN P+G V+ ++A DAD G N+++ Y + + + G
Sbjct: 456 NEPIFVSSPFQATVLENVPLGYPVVHIQAVDAD-SGENARLHYRLV-DTASAFLGGGSAG 513
Query: 62 PLNHFRIVPTKIDPGTKKKEYN-IVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P N PT P I V LDRE Y+ + AVD G+PP
Sbjct: 514 PKNP---APTLDFPFQIHNSSGWITVCAELDREEVE-HYSFGVEAVDHGSPP 561
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP+F + V+EN P+G++V + A D D G N++I Y + GD +F +D
Sbjct: 890 NAPMFEKDELELFVEENNPVGSVVAKIHANDPD-EGPNAQIMYQIVEGDMRHFFQLD 945
Score = 39.7 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG 49
++PVF Y+ V+EN +G V+T++A+D D P +N+ + Y V GG
Sbjct: 244 HSPVFEQSEYRERVRENLEVGYEVLTIRASDRDSP-INANLRYRVLGG 290
Score = 38.9 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N PVF+ Y+ + E+ +G+ V+TL+A D D NS I+Y + GG+ F + ++
Sbjct: 578 NDPVFTQPTYELRLNEDAAVGSSVLTLQARDRDA---NSVITYQLTGGNTRNRFALSSQ 633
>gi|119514250|gb|ABL75913.1| protocadherin 2A32 [Takifugu rubripes]
Length = 943
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 51/117 (43%), Gaps = 24/117 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N PVFS +Y+ V E P+GT ++ L A D D G N + YS+ RG F++D
Sbjct: 234 NTPVFSQSLYKVRVSEGVPVGTQILKLNANDLD-EGSNGDLRYSLMKRGNVNSEKFSVDP 292
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
E IVV LD E + Y L ++A D+G PR Y
Sbjct: 293 ESG--------------------EIVVKASLDYEESG-AYELRVQATDQGASPRSGY 328
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S + +KE+ +GT+V + D D G N +S +R
Sbjct: 341 NAPEISVTSLMSPIKESAGLGTVVALVSVTDKD-GGQNGHLSCKIRDSSPFAL------- 392
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K Y++VV LLDRE Y++T+ A D+GTPP
Sbjct: 393 -------------KSNYKSYYSLVVDGLLDRETIS-QYDVTIVATDEGTPP 429
>gi|26335245|dbj|BAC31323.1| unnamed protein product [Mus musculus]
Length = 340
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N P F YQ V E+ P+ ++V +KAADAD G+N+++ Y + GDGLG F I
Sbjct: 258 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-IGVNAEMEYKIVDGDGLGIFKI 312
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
>gi|350581213|ref|XP_003124070.3| PREDICTED: protocadherin gamma-A4 [Sus scrofa]
Length = 815
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG 49
NAPVF+ Y +V+EN P+G+ ++T+KA D D G N ++ YS R G
Sbjct: 238 NAPVFTQPEYHVSVRENMPVGSRLLTVKATDPD-EGSNGEVMYSFRKG 284
>gi|291239827|ref|XP_002739825.1| PREDICTED: Cadherin-23-like [Saccoglossus kowalevskii]
Length = 3451
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 26/110 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P+F+ Y+ +V EN GT +I L A+D D G N+ I+Y + G+ G F I
Sbjct: 975 HSPLFTANSYEVSVLENATRGTSLIVLSASDGD-IGTNADINYFITHGNQDGKFQI---- 1029
Query: 62 PLNHFR--IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
HF+ +V T LDRE+ YNLT+ A+D G
Sbjct: 1030 ---HFQSGLVQTS---------------AFLDREVVE-EYNLTIEAIDNG 1060
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 49/116 (42%), Gaps = 31/116 (26%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF D Y +V ENQP GT VI + A+D D G N +SY +
Sbjct: 869 NVPVFEDTPYIGSVVENQPAGTSVIQVSASDLD-FGENGTVSYFI--------------- 912
Query: 62 PLNHFRIVPTKIDPGTKKKEYN-----IVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
++P T + N I + LDRE YN+T++A D G P
Sbjct: 913 ---------VSLEPNTNNFDMNSSTGLITLTHPLDREYIQ-AYNITIQARDGGMDP 958
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 9/71 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID--- 58
N P+F++ Y TV EN ++T+ A DAD G N+KI+Y++ G+ F ID
Sbjct: 1080 NRPIFTESNYDVTVMENVTQDYTIVTVHALDAD-IGENAKITYAIIAGNTQNSFVIDSNY 1138
Query: 59 -----NEGPLN 64
NE PL+
Sbjct: 1139 GDIRRNEQPLD 1149
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
AP+F+ +YQ +VKEN+ +G+LV + A D+D +SKI Y + G+
Sbjct: 2446 APLFAITLYQFSVKENESVGSLVGQVVATDSDSVMEHSKIFYHIINGN 2493
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 23/113 (20%)
Query: 5 VFSDFVYQATVKENQ--PIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
VFSD +VKE P+G+++ +KA D D G+N+ ++Y + GD
Sbjct: 1396 VFSDI--SVSVKEEMYTPVGSMIGRVKATDRD-EGINAMVNYEIIDGD-----------V 1441
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
N F I ++ G K ++LLDRE+ Y L + A D G P T
Sbjct: 1442 NNMFNITTNTVNEGIIKN------IQLLDREVKDT-YRLIVSAYDSGDVPLNT 1487
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 25/112 (22%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS VKE+ P+G+ V + A D D G+ I+Y++ G D F ID E
Sbjct: 445 NRPIFSSQSITVDVKEDLPVGSNVTMVTATD-DDIGIYGDITYTISGADQ---FIIDAEL 500
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I +++ +D E++ L Y LT+RA D G P
Sbjct: 501 GV--------------------ISLIQSIDYELS-LRYQLTVRAEDGGNPAE 531
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 24/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + Y+ ++ EN +GT + + A D+D G +G+ +F+ E
Sbjct: 124 NAPVFENTPYKVSISENVTVGTTIFEISATDSDS------------GRNGIIFFSFSTE- 170
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+N F I P + +++ + LD E + Y LT+ A D+G P + +
Sbjct: 171 -INSFSI------PSPNRY---VIINQPLDYEDINI-YELTIVATDQGIPQQSS 213
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N PVF D + E+QPI T++ + A+D D GMN I YS G+ F+I
Sbjct: 547 NPPVFKDIRQTVYIAEDQPIDTVIGNVTASDLD-FGMNGDIIYSFISGNTDDVFSI 601
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P+F +Y+ +V EN GT ++ + A DAD G ++ Y + G G G FT+D
Sbjct: 2169 NNPIFRQSLYETSVVENAIAGTEILVVIATDAD-SGSYGEVRYMLAG--GAGKFTVD 2222
Score = 36.2 bits (82), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF VYQ V E G + ++A D D N+ I Y++ G+ ID G
Sbjct: 657 NSPVFEYTVYQFAVSEEADPGITIGMIRATDMDST-TNAYIDYNITDGN------ID--G 707
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
N R+ G+ + I++ + LDRE + Y LT+ A D+G P
Sbjct: 708 SFNMKRV-------GSGE----IILERQLDRENIDM-YGLTVIASDRGIP 745
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P+F+ Y +V EN P +V T++A D D G++++ISYS+ FTI+
Sbjct: 227 NPPMFTGLPYTTSVDENSPTTLVVQTVRAFDQD-IGLSNQISYSIVSASVPELFTIN 282
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 23/113 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVF+ + EN G +V+ + A DAD G+N +++Y V G G FTI+ N
Sbjct: 1833 NSPVFTPSNMTVFIPENVVGGHVVMEVLAIDAD-IGLNQEVTYRVESG-GQDKFTINPNT 1890
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
G + K+ PG + LDRE Y L + A D+G P +
Sbjct: 1891 GLI--------KVAPG-----------ETLDREQRD-QYTLVVIATDRGNPSQ 1923
>gi|195388388|ref|XP_002052862.1| GJ19658 [Drosophila virilis]
gi|194149319|gb|EDW65017.1| GJ19658 [Drosophila virilis]
Length = 3639
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 56/120 (46%), Gaps = 26/120 (21%)
Query: 2 NAPVFSDFVYQA-TVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTI 57
NAP +D +V+E QP GT V+ ++A D D G N+ I+YS+ R DG G F+I
Sbjct: 1292 NAPEIADPQEDVVSVREEQPPGTEVVRIRAIDRD-HGQNASINYSLLKGRDSDGHGLFSI 1350
Query: 58 DNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
D L R+ +LD E + Y L + A D G PP++T +
Sbjct: 1351 DANTGLIRTRV--------------------MLDHEERSI-YRLAVAATDGGNPPKQTLR 1389
Score = 39.7 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT 56
N P+F Y +V EN+P+G ++ + A+D D G+N+ ++Y++ G+G + T
Sbjct: 629 NEPIFDQSFYNVSVAENEPVGRCILKVSASDPD-CGVNAMVNYTL--GEGFKHLT 680
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
P+F Y VKE+ P GT+V ++ A +D S + YS+ GD GYF+I+
Sbjct: 847 PIFEKARYNYYVKEDVPRGTVVGSVIATSSD-TAQRSPVRYSIYSGDPDGYFSIE 900
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y A+V E+ IG+ V+++KA+DAD G+NS++ YS+ + F ID++
Sbjct: 1991 NEPRFELSKYMASVPEDAAIGSSVLSIKASDAD-LGVNSRLVYSL-ANETQWQFAIDSKS 2048
Query: 62 PL 63
L
Sbjct: 2049 GL 2050
Score = 37.0 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P F VYQAT+ EN P G+ V+ + AA A N+ +SY + G +F +D
Sbjct: 1758 NPPRFLQAVYQATILENVPSGSFVLQV-AAKAFHGADNANLSYEIPTGVAADHFHVD 1813
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 50/110 (45%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P FS + AT E GT V ++A DAD G N+++ Y + G+ F I+
Sbjct: 2369 NSPQFSQRQFVATAWEGNSKGTFVAQVQAFDAD-EGANARLRYHIVDGNHDNAFVIEPA- 2426
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
IV T I +LDREI + Y+L + A D+G P
Sbjct: 2427 ---FSGIVRTNI---------------VLDREIRDV-YSLKIIATDEGVP 2457
Score = 36.2 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 22/105 (20%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
+ E+ G V + D D + ++ S++GGDG HF +
Sbjct: 428 ISESAQPGEFVARISVHDPDSKTEYANVNVSLKGGDG-------------HFALT----- 469
Query: 75 PGTKKKEYNIVVLKL-LDREIAPLGYNLTLRAVDKGTPPRETYKA 118
T+ +V++ L LDRE A Y L++ A DKGTPP K+
Sbjct: 470 --TRDNSIYLVIVNLPLDRE-ATSNYTLSVVATDKGTPPLHASKS 511
Score = 36.2 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ ++EN G +V + A+DAD G N+ I YS+ +
Sbjct: 1189 NDPKFQRESYEFRIEENLRRGAVVGVVSASDAD-LGENAAIRYSLLPAN----------- 1236
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ F++ P + T++ LDRE+ L Y+L + A D+GTP R
Sbjct: 1237 --SSFQVHPVTGEISTREP---------LDREMREL-YDLMVEARDQGTPTR 1276
>gi|359318952|ref|XP_848888.2| PREDICTED: protocadherin alpha-3 [Canis lupus familiaris]
Length = 849
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 25/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR---GGDGLGYFTID 58
NAP F VY+ ++ EN P GTL + + A+D D G+N + YS D L F +D
Sbjct: 275 NAPEFERTVYKVSLFENAPNGTLAVIVNASDLD-EGVNKDVVYSFNTDTSADTLSKFYLD 333
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+N + V ID K Y + + A DKGTPP
Sbjct: 334 ---PVNGYINVKGNIDFEETKL------------------YEIQVEATDKGTPP 366
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 56/115 (48%), Gaps = 28/115 (24%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF V + + E++P G+ + A+DAD G NS ++YS+ D YFT+D
Sbjct: 166 NQPVFPMAVKKLFLFESRPPGSRIPLEGASDAD-IGANSLLTYSLNSND---YFTLD--- 218
Query: 62 PLNHFRIVPTKIDPGTKKKEYNI-----VVLKLLDREIAPLGYNLTLRAVDKGTP 111
K+ + NI V+ K+L+RE P ++L + AVD G P
Sbjct: 219 ---------------IKRNDENIKSLGLVLKKVLNREDTP-EHHLLITAVDGGKP 257
Score = 36.2 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F+ Y VKEN P G + T+ A DAD N+ +SYS+
Sbjct: 488 NAPAFAQPEYTVFVKENNPPGCHIFTVSARDADAQ-ENALVSYSL 531
>gi|119593835|gb|EAW73429.1| cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog,
Drosophila), isoform CRA_b [Homo sapiens]
Length = 3019
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 24/110 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF Y +V E++P+GT + TL A D D G N++I+Y + + P+
Sbjct: 787 PVFQSSHYTVSVSEDRPVGTSIATLSANDED-TGENARITYVI-------------QDPV 832
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
FRI P D GT + + LD E + Y LT+ A D G P +
Sbjct: 833 PQFRIDP---DSGT------MYTMMELDYE-NQVAYTLTIMAQDNGIPQK 872
Score = 43.1 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 54/118 (45%), Gaps = 19/118 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY-------SVRGGDGLGY 54
N P+F +QATV EN P+G V+ ++A DAD G N+++ Y + GG G
Sbjct: 561 NEPIFVSSPFQATVLENVPLGYPVVHIQAVDAD-SGENARLHYRLVDTASTFLGGGSAG- 618
Query: 55 FTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N P F P +I + I V LDRE Y+ + AVD G PP
Sbjct: 619 --PKNPAPTPDF---PFQIHNSSGW----ITVCAELDREEVE-HYSFGVEAVDHGWPP 666
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP+F + V+EN P+G++V ++A D D G N++I Y + GD +F +D
Sbjct: 995 NAPMFEKDELELFVEENNPVGSVVAKIRANDPD-EGPNAQIMYQIVEGDMRHFFQLD 1050
Score = 39.7 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG 49
++PVF Y+ V+EN +G V+T++A+D D P +N+ + Y V GG
Sbjct: 349 HSPVFEQSEYRERVRENLEVGYEVLTIRASDRDSP-INANLRYRVLGG 395
Score = 38.9 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N PVF+ Y+ + E+ +G+ V+TL+A D D NS I+Y + GG+ F + ++
Sbjct: 683 NDPVFTQPTYELRLNEDAAVGSSVLTLQARDRDA---NSVITYQLTGGNTRNRFALSSQ 738
>gi|405950715|gb|EKC18684.1| Cadherin-23 [Crassostrea gigas]
Length = 1710
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 49/110 (44%), Gaps = 20/110 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y A+V EN GT V + A DAD N+K SY + G G FT++
Sbjct: 509 NRPEFRGKTYNASVCENAASGTNVTVVSATDADKTAPNNKYSYFIEKG-GSDQFTLNG-- 565
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K E ++ V LDREI Y LT+ A+DKG P
Sbjct: 566 ----------------KTGEISVQVGANLDREIKS-KYTLTVIAIDKGDP 598
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 20/93 (21%)
Query: 21 IGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKK 80
+GT V+T+ A DAD N++ISY + G G F++D + + G
Sbjct: 1279 VGTSVLTVSAYDADGTAPNNEISYFIFSG-GSDQFSMDGSSGV-------ISVQHGA--- 1327
Query: 81 EYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+LD EI P Y++T+ A+D+G P R
Sbjct: 1328 --------MLDTEIVP-KYDITVIAIDRGNPQR 1351
>gi|260787291|ref|XP_002588687.1| hypothetical protein BRAFLDRAFT_248168 [Branchiostoma floridae]
gi|229273855|gb|EEN44698.1| hypothetical protein BRAFLDRAFT_248168 [Branchiostoma floridae]
Length = 292
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF + Y+ + EN P+GT V+T+ A D D G+ + YS++ +G G F+ID
Sbjct: 108 PVFKNLPYRVQIPENSPVGTFVVTVTAEDRD-LGLAGIVHYSIQESEGSGNFSID 161
>gi|410948487|ref|XP_003980970.1| PREDICTED: protocadherin beta-15-like [Felis catus]
Length = 550
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
NAP F+ +YQ V EN P+GTLV+ + A D D G N +ISYS
Sbjct: 238 NAPEFAQTLYQVQVPENSPVGTLVVKVSARDLD-TGTNGEISYS 280
>gi|355701022|gb|EHH29043.1| Protocadherin-13 [Macaca mulatta]
Length = 952
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F + + T++EN + L A DAD G ++SY + G D YF++D+
Sbjct: 532 NAPIFLQPLIELTIEENNSPNAFLTKLYATDADS-GERGQVSYFL-GPDAPSYFSLDS-- 587
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ V T++D K++ Y T+RAVD G PPRE+
Sbjct: 588 -VTGILTVSTQLDREEKER------------------YRYTVRAVDGGKPPRES 622
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.138 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,269,153,677
Number of Sequences: 23463169
Number of extensions: 96233055
Number of successful extensions: 204620
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3167
Number of HSP's successfully gapped in prelim test: 3232
Number of HSP's that attempted gapping in prelim test: 165753
Number of HSP's gapped (non-prelim): 36498
length of query: 127
length of database: 8,064,228,071
effective HSP length: 93
effective length of query: 34
effective length of database: 10,177,120,650
effective search space: 346022102100
effective search space used: 346022102100
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 71 (32.0 bits)