BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1047
(127 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VW71|FAT2_DROME Fat-like cadherin-related tumor suppressor homolog OS=Drosophila
melanogaster GN=kug PE=2 SV=2
Length = 4705
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 57/96 (59%), Gaps = 6/96 (6%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP F DFVY+ VKEN+P GT V+ + A D D +NSKI+YS+ GGDGLG F ++++G
Sbjct: 1082 APEFDDFVYEGKVKENKPKGTFVMNVTARDMDTVDLNSKITYSITGGDGLGIFAVNDQGS 1141
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG 98
+ +++D TK + + L D I PL
Sbjct: 1142 ITSL----SQLDAETKN--FYWLTLCAQDCAIVPLS 1171
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F +Y+ V E+ +G+ ++ +KA D D +N ++Y++ GD +G F+ID
Sbjct: 3390 NSPTFLQNLYRINVNEDIFVGSKILDVKATDED-SDVNGLVTYNIERGDNIGQFSID--- 3445
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P N GT I V + LDRE Y L ++A D+G P R
Sbjct: 3446 PKN-----------GT------ISVSRPLDRETIS-HYTLEIQACDQGDPQR 3479
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+FS Y ++EN+ +G + +T K +DAD + ++ +R G+ G F ++ +G
Sbjct: 3495 NAPIFSSSNYSVVLQENRLLGYVFLTFKISDADETPNTTPYTFDIRSGNEGGLFRLEQDG 3554
Query: 62 PL 63
L
Sbjct: 3555 SL 3556
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 54/123 (43%), Gaps = 23/123 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y+ +V E+ + TL+ + A D D G+N +I YS+ G+ YF I
Sbjct: 3181 NMPIFSMAQYRVSVPEDAQLNTLITKVHAMDKD-FGVNRQIKYSLM-GENHDYFKISKST 3238
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ I + K LDRE L +NLT++A D G P +
Sbjct: 3239 GI--------------------IRLHKSLDRETISL-FNLTVKAEDCGVPKLHSIATVAV 3277
Query: 122 NGL 124
N L
Sbjct: 3278 NIL 3280
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 48/113 (42%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F + ++ EN G+ V+ L A D D G NS ISYS+ + + +
Sbjct: 500 NDPIFENVNKVISINENNLAGSFVVKLTAKDRDS-GENSYISYSIANLNAVPF------- 551
Query: 62 PLNHFR-IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
++HF IV T LLD E Y L +RA D G P R
Sbjct: 552 EIDHFSGIVKTT---------------SLLDFETMKRNYELIIRASDWGLPYR 589
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS Y + EN GT V + A D G+N+ I Y + G+ G F
Sbjct: 3285 NPPEFSMRQYSCKILENATHGTEVCKVYATSIDI-GVNADIHYFIMSGNEQGKF------ 3337
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+D T ++V+ LD E++ Y LT++A+D GTPP
Sbjct: 3338 ----------KMDSTTG----DLVLNATLDYEMSKF-YFLTIQAIDGGTPP 3373
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 50/108 (46%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y+ ++ E PI VI LK +D D G N+ + + GG NEG
Sbjct: 393 NIPIFTQEIYEVSIPETAPINMPVIRLKVSDPD-LGKNALVYLEIVGG---------NEG 442
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ FRI P D G + K LD E Y LT+ A+D+
Sbjct: 443 --DEFRINP---DSGM------LYTAKQLDAE-KKSSYTLTVSAIDQA 478
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 11/89 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N+P F VY+ V + + + + A D+D G N +I+YS++ G G F ID++
Sbjct: 1292 NSPEFDQRVYKVQVPSSATVNQSIFQVHAIDSDS-GENGRITYSIKSGKGKNKFRIDSQR 1350
Query: 61 ------GPL---NHFRIVPTKIDPGTKKK 80
PL N F I D G KK
Sbjct: 1351 GHIHIAKPLDSDNEFEIHIKAEDNGIPKK 1379
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG 51
N P+F + Y ATV + P GT+++ +KA D D N ++ Y ++ G+G
Sbjct: 2133 NCPLFVNMPYYATVSIDDPKGTIIMQVKAIDLD-SAENGEVRYELKKGNG 2181
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P+F Y+A V EN G +IT+KA+D D G + + Y + + F ID
Sbjct: 2564 SPLFDQSTYEAQVPENLLHGHNIITVKASDGD-FGTYANLYYEIVSEEMKKIFLIDQTTG 2622
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLD 91
++ +K+ +KK+ +V+LK+ D
Sbjct: 2623 -----VITSKVTFDREKKDEYVVLLKVSD 2646
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 45/113 (39%), Gaps = 20/113 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F + Y A+V EN ++ + A DAD G N I Y Y D E
Sbjct: 2872 NYPKFDNTFYSASVAENSEKVISLVKVSATDAD-TGPNGDIRY---------YLESDTEN 2921
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
N F I I G I +L LDRE+ YN + A D G P +
Sbjct: 2922 IQNIFDI---DIYSGW------ITLLTSLDREVQS-EYNFKVIAADNGHPKHD 2964
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 50/121 (41%), Gaps = 24/121 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-N 59
++ P F +F + ++ E+ +G V ++A D D G N K+ +++ GD F ID +
Sbjct: 764 VHRPEFVNFPQELSINESVQLGETVAWIEAKDRD-LGYNGKLVFAISDGDYDSVFRIDPD 822
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
G L ++ LDRE Y L + D G P + T K
Sbjct: 823 RGELQ---------------------IIGYLDRE-RQNEYVLNITVYDLGNPTKSTSKML 860
Query: 120 P 120
P
Sbjct: 861 P 861
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ + Q+ V E+ IG+ + ++A D D G N++I YS+ G+ F ID
Sbjct: 1607 PEFTAKIIQSKVPESAAIGSKLAEVRAIDRD-SGHNAEIQYSIITGNVGSVFEID----- 1660
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PT G N+ + K+ + Y L ++AVD G PP
Sbjct: 1661 ------PT---FGIITLAGNLNINKIQE-------YMLQVKAVDLGNPP 1693
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 21/42 (50%)
Query: 79 KKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
K EY I + + YNLTL A D GTP R YK+ P
Sbjct: 343 KDEYYIELNQFAHLNQQHFIYNLTLLAEDLGTPRRFAYKSVP 384
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
NAPVF Y V+E+ P GT++ ++A D D G N++I +S++
Sbjct: 973 NAPVFGVQEYIFKVREDLPRGTVLAVIEAVDED-IGPNAEIQFSLK 1017
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P+ VY V E +ITLKA D D + I+Y++ G+ +GYF ID++
Sbjct: 1186 NIPLTDKPVYYVNVTEASVENVEIITLKAFDPDIDPTQT-ITYNIVSGNLVGYFEIDSK 1243
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N PV + + E+ IGT+V L A DAD G+N++++Y++
Sbjct: 870 NRPVIQKTLATFRLTESARIGTVVHCLHATDAD-SGINAQVTYAL 913
>sp|Q2PZL6|FAT4_MOUSE Protocadherin Fat 4 OS=Mus musculus GN=Fat4 PE=1 SV=2
Length = 4981
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y ++ EN P+G+ V+ DAD G+NS++SYS+ GD LG F +D G
Sbjct: 1940 NPPVFSMSSYSTSLMENLPLGSTVLVFNVTDADD-GVNSQLSYSIASGDSLGQFAVDKHG 1998
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L LK LDRE YNL ++ D PP + +T +
Sbjct: 1999 VLK---------------------TLKALDRESQSF-YNLVIQVHDLPQPPTSRFTSTAQ 2036
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y+ +KEN GT +I + AAD D G N ++ Y + GG+ F ID+
Sbjct: 2150 NNPVFAQAMYRVQIKENILTGTDIIQVSAADND-EGTNGQVRYGIVGGNTHQEFRIDSVT 2208
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I V K LDRE P Y LT++A D+G+ PR
Sbjct: 2209 GA--------------------ITVAKSLDRETTP-AYTLTVQATDRGSSPR 2239
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS Y+ + E PIGT V + A D+D S+ SY + G+ G F+
Sbjct: 3404 PVFSLSTYRVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGAFS------- 3456
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I V LDRE P+ YNLT+ AVD GTP
Sbjct: 3457 ---------INPQTGQ----ITVTSGLDRESLPV-YNLTVLAVDSGTP 3490
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF VY+ + E P G+ V + A D D G+N+ + YS+ G+GLG+F I
Sbjct: 473 PVFEQQVYRVNLSEEVPPGSYVSGVSATDGDS-GLNANLRYSIVSGNGLGWFHIS----- 526
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T G LDRE+A L + A D+G P+ +Y
Sbjct: 527 EHSGLVTTSAAGG-------------LDRELAS-QIVLNISARDQGVHPKVSY 565
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD P N IS + GG NE HF + +K
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSPAANGNISVQILGG---------NEQ--RHFEVQRSK 413
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD-KGTPPRETYKA 118
+ P I V LDRE P YNLT+ D G PP +A
Sbjct: 414 V-PNLSL----IKVASALDRERIP-SYNLTVSVSDNSGAPPTAEVQA 454
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N+ I Y ++ +EG
Sbjct: 246 NPPVFGSSHYQAGVPEDAVVGSSVLQVAAADAD-EGTNADIRYRLQ-----------DEG 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P ++DP T I V + LD E A Y+LT++A D+G P
Sbjct: 294 -------TPFQMDPETGL----ITVREPLDFE-ARRQYSLTVQATDRGVP 331
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G+N+ + Y++ G + G F+
Sbjct: 1311 NTPSFPKSTLFVDVLENMRIGELVSSVTATDSD-SGVNADLHYTITGSNNHGTFS----- 1364
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1365 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1402
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF + TV EN P GT VI L A DAD G N+ I+Y+V+ D F ID
Sbjct: 3192 NSPVFVPDEFFPTVMENAPSGTTVIHLNATDAD-SGANAVIAYTVQSSDS-DLFVID 3246
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y+ T+ E++P+ + ++A+D D G N +I+Y++ G+ F I +G
Sbjct: 992 NPPVFDQISYEVTLSESEPVNSRFFKVQASDKD-SGANGEIAYTITDGNNGDAFGIFPDG 1050
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPL 97
L + +++D + + +VV DR + PL
Sbjct: 1051 QL----YIKSELDRELQDRYVLLVVAS--DRAVEPL 1080
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 51/117 (43%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G VI A D+D G++ SY + G+ G F +D
Sbjct: 131 NAPVFPDPSIVVTFKEDSGSGRQVILDTATDSDIGSNGVDHH-SYRIVSGNEAGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P R Y
Sbjct: 189 -----------ITLNPSGEGAFLHLVSKGGLDREVTP-QYQLLVEVEDKGEPKRRGY 233
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F Y V +N +GT +I + A D G+NS++ Y V G+ LG F +DN+
Sbjct: 2981 NPPQFLQNKYFTPVTKNVKVGTKLIKVTAVDDKDFGLNSEVEYFVSDGNHLGKFKLDND 3039
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS AT+ E+ IG++V T+ A D D MN ISY++ G+ G F I++
Sbjct: 3087 HTPEFSQNHISATIPESHSIGSVVRTVSARDRD-TAMNGLISYNIISGNEEGIFAINSST 3145
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ + + K LD E++ + +T+ A D G R Y
Sbjct: 3146 GV--------------------VTLAKALDYEMSS-KHEMTISATDGGWVARTGY 3179
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A ++EN+P G+ V T+ A D D G N + YS+ GD
Sbjct: 685 NSPVFYPVQYFAHIQENEPGGSYVTTVSATDPD-MGPNGTVKYSISAGD 732
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 47/111 (42%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQATV E T V+ + A+D D G N I YS+ G+ F ID+
Sbjct: 1206 NAPKFLKDFYQATVSETATNLTQVLRVSASDVD-EGSNGLIHYSILKGNEERQFAIDSFS 1264
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ ++ LD E A Y+L ++AVD G P
Sbjct: 1265 G--------------------QVTLVGKLDYE-ATSAYSLLIQAVDSGAIP 1294
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
+ P FS VY + E+ G+LV + A D D G+N +ISY V DG G F ++
Sbjct: 1837 HTPRFSRPVYSFDIPEDTTPGSLVAAILATD-DDSGVNGEISYVVEEDDGDGVFFLN 1892
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 22/113 (19%)
Query: 4 PVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
PVFS Y+ +V EN P GT ++ L A D D G N + +S++ + E
Sbjct: 580 PVFSQPEGYEVSVVENAPTGTELLVLGATDRD-LGDNGTVRFSLQ----------EAEND 628
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
FR+ P T LDRE Y L++ A D G+PP+ +
Sbjct: 629 QRLFRLDPVSGRLSTASS---------LDREEQAF-YCLSILATDLGSPPQSS 671
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVFS Y V EN +G V ++ A D +N+ ISY + GD G F ++
Sbjct: 789 NPPVFSQAAYSFVVFENVALGYHVGSVSATTMD---LNANISYLITTGDQRGMFAMN 842
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 21/98 (21%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKI 73
++ EN P+GT VI++ A D D +N ++SY++ I NHF I K
Sbjct: 1428 SIVENIPLGTSVISVTAHDPD-ADINGQLSYAI----------IQQMPRGNHFSIDEVK- 1475
Query: 74 DPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
GT I +DRE A L + LT++A D+ P
Sbjct: 1476 --GT------IYTSAEIDREFANL-FELTVKANDQAVP 1504
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 8/111 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
N PVF TV+EN G+ ++ L A DAD G N+ ++Y+ + G D F ID E
Sbjct: 1736 NPPVFPTDTLDLTVEENIGDGSKIMQLTAMDAD-EGANALVTYALISGAD--DSFRIDPE 1792
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
++ TK + +Y+++V + + + N+T+ V+ TP
Sbjct: 1793 SG----DLIATKRLDREHRSKYSLLVRADDGLQSSDMRINITISDVNDHTP 1839
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 43/98 (43%), Gaps = 23/98 (23%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
+ EN PI T+V +A D D G NS I Y++ G N F I
Sbjct: 2059 IPENTPIDTVVFKAQATDPDS-GPNSYIEYTLLNPSG------------NKFSI------ 2099
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
GT E ++ LDRE Y+LT+ A DKG PP
Sbjct: 2100 -GTIDGEVHLT--GELDREEVS-NYSLTVVATDKGQPP 2133
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
++ PVF+ Y +KE +PIGT VI+++A A P G + + Y +
Sbjct: 1624 LDGPVFTQTKYITILKEGEPIGTNVISIEA--ASPRGSEAPVEYYI 1667
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD-PPGMNSKISYSVRGGDGLGYFTIDNE 60
N PV + V + V EN+ GTLV+TL++ D D PP Y + G YF++
Sbjct: 3508 NGPVLT--VSEGEVLENKRPGTLVMTLQSTDPDLPPNQGPFNYYLLSTGPATNYFSLSTA 3565
Query: 61 GPLNHFR 67
G L+ R
Sbjct: 3566 GVLSTTR 3572
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 38/87 (43%), Gaps = 15/87 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTL--VITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
PVF Y V EN +GTL I A D G NS++SY + GG+ F + G
Sbjct: 2257 PVFELSPYSVNVPEN--LGTLPRAILQVVARDDDQGPNSQLSYVLLGGNEDNAFVLTASG 2314
Query: 62 PL-----------NHFRIVPTKIDPGT 77
L +HF +V T D G+
Sbjct: 2315 ELRVTQSLDREARDHFVLVVTAADAGS 2341
Score = 32.3 bits (72), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 25/115 (21%)
Query: 2 NAPVFSDFVYQATVKEN-QPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP F + + + + EN P ++T+ A D D G N ++ Y + G+ FTI
Sbjct: 2667 NAPTFEEDPFVSEILENLSP--RKILTVSATDKDS-GPNGQLDYEIVNGNQESSFTI--- 2720
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
NH I ++ LDRE Y LT+++ DKG+P + T
Sbjct: 2721 ---NH--------------ATGEIRSIRPLDREKIS-HYELTVKSSDKGSPSQST 2757
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP FS ++ A V EN P+G V + +D D G+N+ YS+
Sbjct: 2771 NAPRFSQ-IFSAYVSENSPLGYTVTRVTTSDED-IGINAISRYSI 2813
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F V EN G + KA D D G+N ++ YS++ +
Sbjct: 889 NAPHFLQAVESINAVENWQAGHSIFQAKAVDPD-EGVNGRVLYSLK------------QN 935
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P N F I ++ NI +L LD + Y + + A D G P
Sbjct: 936 PKNLFTI---------NEQNGNISLLGALD--VHAGSYQVEIVASDMGVP 974
>sp|Q6V0I7|FAT4_HUMAN Protocadherin Fat 4 OS=Homo sapiens GN=FAT4 PE=1 SV=2
Length = 4981
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 23/120 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+FS Y ++ EN P+G+ V+ DAD G+NS+++YS+ GD LG FT+D G
Sbjct: 1940 NPPIFSLNSYSTSLMENLPVGSTVLVFNVTDADD-GINSQLTYSIASGDSLGQFTVDKNG 1998
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
L VLK LDRE YNL ++ D P + +T +
Sbjct: 1999 VLK---------------------VLKALDRESQSF-YNLVVQVHDLPQIPASRFTSTAQ 2036
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 20/113 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVFS VY+ + E P G+ V + A D D G+N+ + YS+ G+GLG+F I
Sbjct: 473 PVFSQQVYRVNLSEEAPPGSYVSGISATDGD-SGLNANLRYSIVSGNGLGWFHIS----- 526
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
H +V T G LDRE+A L + A D+G P+ +Y
Sbjct: 527 EHSGLVTTGSSGG-------------LDRELAS-QIVLNISARDQGVHPKVSY 565
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+F+ +Y + E PIGT V + A D+D S+ SY + G+ G F+
Sbjct: 3402 PIFTLNIYSVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGAFS------- 3454
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I V LDRE P+ YNL++ AVD GTP
Sbjct: 3455 ---------INPQTGQ----ITVTAELDRETLPI-YNLSVLAVDSGTP 3488
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F+ +Y+ + EN GT +I + AAD D G N ++ Y + G+ F ID+
Sbjct: 2150 NNPIFAQALYKVEINENTLTGTDIIQVFAADGD-EGTNGQVRYGIVNGNTNQEFRIDSVT 2208
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
I V K LDRE P Y+LT++A D+G+ PR
Sbjct: 2209 GA--------------------ITVAKPLDREKTPT-YHLTVQATDRGSTPR 2239
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
A+V EN +GT+V L DAD P N IS + GG NE HF + +K
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSPAANGNISVQILGG---------NEQ--RHFEVQSSK 413
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK-GTPPRETYKA 118
+ P I V LDRE P YNLT+ D G PP +A
Sbjct: 414 V-PNLSL----IKVASALDRERIP-SYNLTVSVSDNYGAPPGAAVQA 454
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 24/110 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF YQA V E+ +G+ V+ + AADAD G N+ I Y ++ +EG
Sbjct: 246 NPPVFGSSHYQAGVPEDAVVGSSVLQVAAADAD-EGTNADIRYRLQ-----------DEG 293
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P ++DP T I V + LD E A Y+LT++A+D+G P
Sbjct: 294 -------TPFQMDPETGL----ITVREPLDFE-ARRQYSLTVQAMDRGVP 331
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+PVF Y TV EN P GT VI L A DAD G N+ I+Y+V+ D F ID
Sbjct: 3190 NSPVFLSDDYFPTVLENAPSGTTVIHLNATDAD-SGTNAVIAYTVQSSDS-DLFVID 3244
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF Y+ T+ E++P+ + ++A+D D G N +I+Y++ G+ F I +G
Sbjct: 992 NSPVFDQLSYEVTLSESEPVNSRFFKVQASDKD-SGANGEIAYTIAEGNTGDAFGIFPDG 1050
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 106
L + +++D + + +VV DR + PL + + +
Sbjct: 1051 QL----YIKSELDRELQDRYVLMVVAS--DRAVEPLSATVNVTVI 1089
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQAT+ E+ T V+ + A+D D G N I YS+ G+ F ID+
Sbjct: 1206 NAPKFLKDFYQATISESAANLTQVLRVSASDVD-EGNNGLIHYSIIKGNEERQFAIDSTS 1264
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ ++ LD E P Y+L ++AVD GT P
Sbjct: 1265 G--------------------QVTLIGKLDYEATP-AYSLVIQAVDSGTIP 1294
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F V EN IG LV ++ A D+D G N+ + YS+ G + G F+
Sbjct: 1311 NTPSFPKSTLFVDVLENMRIGELVSSVTATDSD-SGDNADLYYSITGTNNHGTFS----- 1364
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
I P T +I + K LD E L Y L + A D+G PPR +
Sbjct: 1365 -----------ISPNTG----SIFLAKKLDFETQSL-YKLNITAKDQGRPPRSS 1402
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 22/121 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS AT+ E+ IG++V T+ A D D MN I YS+ G+ G F I++
Sbjct: 3085 HTPEFSQSHMSATIPESHSIGSIVRTVSARDRD-AAMNGLIKYSISSGNEEGIFAINSST 3143
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ + + K LD E+ + +T+ A+D G R Y +
Sbjct: 3144 GI--------------------LTLAKALDYELCQ-KHEMTISAIDGGWVARTGYCSVTV 3182
Query: 122 N 122
N
Sbjct: 3183 N 3183
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD--PPGMNSKISYSVRGGDGLGYFTIDN 59
NAPVF D T KE+ G VI A D+D G++ + SY + G+ G F +D
Sbjct: 131 NAPVFPDPSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIIRGNEAGRFRLD- 188
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
++P + ++V LDRE+ P Y L + DKG P R Y
Sbjct: 189 -----------ITLNPSGEGAFLHLVSKGGLDREVTP-QYQLLVEVEDKGEPKRRGY 233
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
N+PVF Y A +KEN+P G+ + T+ A D D G N + YS+ GD
Sbjct: 685 NSPVFYPVQYFAHIKENEPGGSYITTVSATDPD-LGTNGTVKYSISAGD 732
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
NAP F Y V +N +GT +I + A D G+NS++ Y + + LG F +DN+
Sbjct: 2979 NAPQFLKSKYFTPVTKNVKVGTKLIRVTAIDDKDFGLNSEVEYFISNDNHLGKFKLDND 3037
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVFS Y V EN +G V ++ A+ D +NS ISY + GD G F I+
Sbjct: 789 NPPVFSQVAYSFVVFENVALGYHVGSVSASTMD---LNSNISYLITTGDQKGMFAIN 842
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 4 PVFSD-FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
PVFS Y +V EN P GT ++ L+A D D G N + +S++ + E
Sbjct: 580 PVFSQPEGYDVSVVENAPTGTELLMLRATDGD-LGDNGTVRFSLQ----------EAETD 628
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
FR +DP + + + + LDRE Y+L + A D G+PP+ +
Sbjct: 629 RRSFR-----LDPVSGR----LSTISSLDREEQAF-YSLLVLATDLGSPPQSS 671
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 23/99 (23%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL-NHFRIVPTK 72
++ EN PIGT VI++ A D D +N ++SY TI + P NHF I K
Sbjct: 1428 SIVENIPIGTSVISVTAHDPD-ADINGQLSY-----------TIIQQMPRGNHFTIDEVK 1475
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
GT I +DRE A L + LT++A D+ P
Sbjct: 1476 ---GT------IYTNAEIDREFANL-FELTVKANDQAVP 1504
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF + TV+EN G+ ++ L A DAD G N+ ++Y++ G F ID E
Sbjct: 1736 NPPVFPTDMLDLTVEENIGDGSKIMQLTAMDAD-EGANALVTYTIISG-ADDSFRIDPES 1793
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
++ T+ ++ +Y+++V + + + N+T+ V+ TP
Sbjct: 1794 G----DLIATRRLDRERRSKYSLLVRADDGLQSSDMRINITVSDVNDHTP 1839
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADAD-PPGMNSKISYSVRGGDGLGYFTIDNE 60
N P+ + V + V EN+ GTLV+TL++ D D PP Y + G YF++
Sbjct: 3506 NGPMLT--VSEGEVMENKRPGTLVMTLQSTDPDLPPNQGPFTYYLLSTGPATSYFSLSTA 3563
Query: 61 GPLNHFR 67
G L+ R
Sbjct: 3564 GVLSTTR 3570
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 26/110 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y T+ E+ P GT V+ + A+DAD + + +R G FT
Sbjct: 2360 NVPTFASKAYFTTIPEDAPTGTDVLLVNASDAD-----ASKNAVIRIIGGNSQFT----- 2409
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
I+P T + I+ LLDRE Y L + D G+P
Sbjct: 2410 -----------INPSTGQ----IITSALLDRETKD-NYTLVVVCSDAGSP 2443
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 31/125 (24%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVF+ Y +KE +PIGT VI+++AA S RG +E
Sbjct: 1624 LDGPVFTQPKYITILKEGEPIGTNVISIEAA-------------SPRG----------SE 1660
Query: 61 GPLNHFRIVPTKIDPGTKKKEYN-------IVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P+ ++ IV + + T + + I +LDRE Y + + A++K T
Sbjct: 1661 APVEYY-IVSVRCEEKTVGRLFTIGRHTGIIQTAAILDREQGACLYLVDVYAIEKSTAFP 1719
Query: 114 ETYKA 118
T +A
Sbjct: 1720 RTQRA 1724
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 44/110 (40%), Gaps = 26/110 (23%)
Query: 4 PVFSDFVYQATVKENQPIGTL--VITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
PVF Y V EN +GTL I A D G NSK+SY + GG+ FT+ G
Sbjct: 2257 PVFELSPYSVNVPEN--LGTLPRTILQVVARDDDRGSNSKLSYVLFGGNEDNAFTLSASG 2314
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L V + LDRE + L + A D G+P
Sbjct: 2315 ELG---------------------VTQSLDRETKER-FVLMITATDSGSP 2342
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 22/108 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P FS VY + E+ G+LV + A D D G+N +I+Y V D G F ++
Sbjct: 1837 HTPKFSRPVYSFDIPEDTIPGSLVAAILATD-DDSGVNGEITYIVNEDDEDGIFFLN--- 1892
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
P+ +N+ +LLD E+ Y LT+RA D G
Sbjct: 1893 PITGV---------------FNLT--RLLDYEVQQY-YILTVRAEDGG 1922
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F + + + + EN ++T+ A D D G N ++ Y + G+ ++N
Sbjct: 2665 NAPIFKEDPFISEILENLS-PRKILTVSAMDKDS-GPNGQLDYEIVNGN------MENSF 2716
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+NH I ++ LDRE Y LT+++ DKG+P + T
Sbjct: 2717 SINH--------------ATGEIRSVRPLDREKVS-HYVLTIKSSDKGSPSQST 2755
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 25/108 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS ++ A V EN P+G V + +D D G+N+ YS+
Sbjct: 2769 NAPRFSQ-IFSAHVPENSPLGYTVTRVTTSDED-IGINAISRYSIMDAS----------- 2815
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+P I+P T +IV+ + L+RE Y + + A D G
Sbjct: 2816 -------LPFTINPSTG----DIVISRPLNREDTDR-YRIRVSAHDSG 2851
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 40/99 (40%), Gaps = 27/99 (27%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRG--GDGLGYFTIDNEGPLNHFRIVPTK 72
+ EN PI T+V +A D D G NS I Y++ G+ TID E
Sbjct: 2059 IPENTPIDTVVFKAQATDPDS-GPNSYIEYTLLNPLGNKFSIGTIDGE------------ 2105
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+ + LDRE Y LT+ A DKG P
Sbjct: 2106 -----------VRLTGELDREEVS-NYTLTVVATDKGQP 2132
>sp|Q8R508|FAT3_RAT Protocadherin Fat 3 OS=Rattus norvegicus GN=Fat3 PE=1 SV=1
Length = 4555
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F ID+E
Sbjct: 1037 LHTPYFPDFAVVGSVKENSRIGTSVLQVTAHDED-SGRDGEIQYSIRDGSGLGRFNIDDE 1095
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I +LDRE Y LT+ A D+G P
Sbjct: 1096 SGV--------------------ITAADILDRETTA-SYWLTVYATDRGVVP 1126
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 2919 NAPVFAHEVYRGNVKESDPPGEVVAVLSTLDKDTSNINRQVSYHITGGNPRGRFAL---- 2974
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 2975 --------------GMVQSEWKVYVKRPLDREEQDI-YFLNITASD 3005
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F + +Y+ V E+ P+GT V+T+ A+D D G N I+YS+ + L +
Sbjct: 467 HTPEFQETLYETFVNESVPVGTNVLTVSASDKD-KGENGYITYSIASLNLLPF------- 518
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 519 AINQFTGV--------------ISTTEELDFESSPETYRFIVRASDWGSPYRH 557
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y A++ E+ P +++ + A DAD G N I YS+ G +F
Sbjct: 3024 NSPVCDQVAYSASLPEDIPSNKIILKVSAKDAD-IGSNGDIRYSLYGSGNSDFF------ 3076
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+DP + + + L LLDRE P+ YNL RA D G
Sbjct: 3077 -----------LDPESGE----LKTLALLDRERVPV-YNLIARATDGG 3108
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 25/109 (22%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI ++A D D PG ++SYS+ F ID+ G
Sbjct: 2492 SPAFSQSTYVAEVRENAASGTKVIHVRATDGD-PGTYGQVSYSIINDFAKDRFLIDSNG- 2549
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLT--LRAVDKG 109
I+ + LDRE PL +++ LRA+D G
Sbjct: 2550 --------------------QIITTERLDRE-NPLEGDISIYLRALDGG 2577
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 53/114 (46%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ +GT V+++ A D G N++I+Y +R G+ G F
Sbjct: 3231 NPPVFERRDYLVTVPEDTSLGTQVLSVFATSKD-IGTNAEITYLIRSGNEQGKF------ 3283
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+I+P T I VL+ LD E+ Y L + A D GTP T
Sbjct: 3284 ----------RINPKTG----GISVLEALDYEMCKRFY-LVVEAKDGGTPALST 3322
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS VY A + E+ G VI L A D D N +I +S+ GGD F +D
Sbjct: 3336 NPPRFSQDVYSAVISEDALEGDSVILLIAEDVDSKP-NGQIRFSIVGGDRDNEFAVD--- 3391
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P+ +V K K LDRE GY+L ++AVD G P
Sbjct: 3392 PI--LGLVKVK---------------KKLDRERVS-GYSLLIQAVDSGIP 3423
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 17/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ S+ +Y V EN P VI ++A D D G N K++Y + G+ +F I
Sbjct: 1143 NAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPD-SGSNEKLTYRITSGNPQNFFAINIKT 1201
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNI-VVLKLLDR 92
D E HF V T D G+ K+ I VV+++LD
Sbjct: 1202 GLITTTSRKLDREQQAEHFLEV-TVTDGGSSPKQSTIWVVVQVLDE 1246
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 24/110 (21%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFR 67
F VKEN P+GT ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 728 FPSDVAVKENMPVGTNILKIKAYDAD-SGFNGKVLFTISDGNTDSCFNIDMETGQLK--- 783
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 784 ------------------VLMPMDREHTDL-YVLNITIYDLGKPQKSSWR 814
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 25/120 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVF Y A V+ + GTL+ + A D D G N +++Y ++ D G+F I+ N
Sbjct: 2079 NSPVFVGLPYYAAVQVDAEPGTLIYRVTAIDKDK-GANGEVTYVLQ--DDYGHFEINPNS 2135
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
G N+++ + + +++ + Y +T+ A D GTP T+ P
Sbjct: 2136 G---------------------NVILKEAFNSDLSNIDYGVTILAKDGGTPSLSTFVELP 2174
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D S+S+ G+ F +D+ G
Sbjct: 3441 NSPVFTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPPFSFSILSGNEDEEFMLDSHG 3500
Query: 62 PL 63
L
Sbjct: 3501 IL 3502
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A V EN L+ ++A D D G+N K+ YS+ G F+ID+
Sbjct: 3126 NPPVFSSNHYTACVYENTATKALLTRVQAVDPD-VGINRKVVYSLEDS-ASGVFSIDSSS 3183
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ IV+ + LDRE YN+++RA D+
Sbjct: 3184 GV--------------------IVLEQPLDRE-QQSSYNISVRATDQS 3210
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D++
Sbjct: 2389 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYSILSGNDRTSFLMDSKS 2447
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 12/100 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---------RGGDGL 52
N+PVF Y ++ E+ IGT +I ++A D D G N +++YSV G+
Sbjct: 826 NSPVFLQDSYSVSILESSSIGTEIIQVEARDKD-LGSNGEVTYSVLTDTHQFVINSSTGI 884
Query: 53 GYFT--IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLL 90
Y +D E N+ + + + ++ +++V LK+
Sbjct: 885 VYIADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKIF 924
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 58/111 (52%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F++ +Y+A+V E+ +G++V+ + A D D G N+++ YS+ G N G
Sbjct: 1561 HSPYFTNPLYEASVFESAALGSVVLQVTALDKD-KGENAELIYSIEAG---------NTG 1610
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F+I P + T KE ++ + + L+++ D+G+PP
Sbjct: 1611 --NTFKIEPV-LGIITISKEPDMTAMG---------QFVLSVKVTDQGSPP 1649
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL----GYFTI 57
N PVF Y+ + E P+GT + ++A D D G N +++YS+ L F I
Sbjct: 2809 NKPVFETSSYETIIMEGMPVGTKLAQVRAIDTD-WGANGQVTYSLHSDSHLEKVMEAFNI 2867
Query: 58 D-NEGPLNHFRIVPTKIDP 75
D N G ++ + + + DP
Sbjct: 2868 DSNTGWISTLKDLDHETDP 2886
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F ID
Sbjct: 932 SPAFIPSSYSVKVLEDLPVGTVIAWLETQDPD-LGLGGQVRYSLV-NDYNGRFEID---- 985
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 986 ----------------KASGAIRLSKELDYEKQQF-YNLTVRAKDKGRP 1017
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG--DGLGYFTIDN 59
N PVF Y T+ E+ IGT V+ L + DAD G N+ + Y + + YF ID+
Sbjct: 2282 NPPVFDQPTYNTTLSESSLIGTPVLQLVSTDAD-SGNNNLVHYQIVQDTYNSTDYFHIDS 2340
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L I+ ++LD E+ L + A D G P
Sbjct: 2341 SSGL--------------------ILTARMLDHELVQ-HCTLKVTATDNGFP 2371
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 16/78 (20%)
Query: 37 GMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIA 95
G N +I S S+ GD L F + EG EY + + +D E
Sbjct: 292 GANGEIESVSIVDGDPLEQFFLAKEGKW---------------MNEYKVKERRQVDWESF 336
Query: 96 PLGYNLTLRAVDKGTPPR 113
GYNLT++A DKG+P +
Sbjct: 337 SYGYNLTIQAKDKGSPQK 354
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F Y+A+V+ + G LV ++A D D G NS+I+YS+
Sbjct: 2595 NAPQFMTLEYRASVRADVGRGHLVTQVQALDPD-DGANSRITYSL 2638
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
P F+ YQA V EN IGT VI + A S + Y V+ G+ G FTI+
Sbjct: 1668 PKFTHKDYQAEVNENVDIGTSVILISAIS------QSTLIYEVKDGNINGVFTIN 1716
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+P+F Q + + P+G + + A D D + + Y + G+ LG+F ++
Sbjct: 573 NSPLFEKVACQGVISYDFPVGGHITAISAIDIDELEL---VKYKIISGNELGFFYLN 626
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLV-------ITLKAADADPPGMNSKISYSVRGGDGLGY 54
N PVF Y ++ E PI +LV + ++A DAD N+ + Y + +
Sbjct: 1764 NPPVFLFSQYSGSLSEAAPINSLVRSLDNSPLVIRATDAD-SNQNALLVYQIVESTAKKF 1822
Query: 55 FTIDN 59
FT+D+
Sbjct: 1823 FTVDS 1827
>sp|Q8TDW7|FAT3_HUMAN Protocadherin Fat 3 OS=Homo sapiens GN=FAT3 PE=2 SV=2
Length = 4589
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F+ID+E
Sbjct: 1038 LHTPYFPDFAVVGSVKENSRIGTSVLQVTARDED-SGRDGEIQYSIRDGSGLGRFSIDDE 1096
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I +LDRE Y LT+ A D+G P
Sbjct: 1097 SGV--------------------ITAADILDRETMG-SYWLTVYATDRGVVP 1127
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 2920 NAPVFAQEVYRGNVKESDPPGEVVAVLSTWDRDTSDVNRQVSYHITGGNPRGRFAL---- 2975
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 2976 --------------GLVQSEWKVYVKRPLDREEQDI-YFLNITATD 3006
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS VY A + E+ +G VI L A D D N +I +S+ GD FT+D
Sbjct: 3337 NPPKFSQDVYSAVISEDALVGDSVILLIAEDVDSQP-NGQIHFSIVNGDRDNEFTVDPVL 3395
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L + V K LDRE GY+L ++AVD G P
Sbjct: 3396 GL--------------------VKVKKKLDRERVS-GYSLLVQAVDSGIP 3424
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F +Y A V E+ P+GT V+T+ A+D D G N I+YS+ + L +
Sbjct: 468 HTPEFQQPLYDAYVNESVPVGTSVLTVSASDKD-KGENGYITYSIASLNLLPFV------ 520
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 521 -INQFTGV--------------ISTTEELDFESSPEIYRFIVRASDWGSPYRH 558
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI ++A D D PG +ISY++ F ID+ G
Sbjct: 2493 SPAFSQSTYVAEVRENVAAGTKVIHVRATDGD-PGTYGQISYAIINDFAKDRFLIDSNGQ 2551
Query: 63 L 63
+
Sbjct: 2552 V 2552
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 16/78 (20%)
Query: 37 GMNSKI-SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIA 95
G N +I S S+ GD L F + EG EY I K +D E
Sbjct: 293 GANGEIESVSIVAGDPLDQFFLAKEGKW---------------LNEYKIKERKQIDWESF 337
Query: 96 PLGYNLTLRAVDKGTPPR 113
P GYNLTL+A DKG+P +
Sbjct: 338 PYGYNLTLQAKDKGSPQK 355
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D S+S+ G+ F +D G
Sbjct: 3442 NSPVFTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPPFSFSILSGNEEEEFVLDPHG 3501
Query: 62 PL 63
L
Sbjct: 3502 IL 3503
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 17/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ S+ +Y V EN P VI ++A D D N K++Y + G+ +F I
Sbjct: 1144 NAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSS-NEKLTYRITSGNPQNFFAINIKT 1202
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNI-VVLKLLDR 92
D E HF V T D G K+ I VV+++LD
Sbjct: 1203 GLITTTSRKLDREQQAEHFLEV-TVTDGGPSPKQSTIWVVVQVLDE 1247
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y++ V E P G V ++A+DAD + ++ YS+ G+ F +D++
Sbjct: 2390 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFD-RLEYSILSGNDRTSFLMDSKS 2448
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ GT V+ + A D G N++I+Y +R G+ G F
Sbjct: 3232 NPPVFERRDYLVTVPEDTSPGTQVLAVFATSKDI-GTNAEITYLIRSGNEQGKF------ 3284
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
KI+P T I V ++LD E+ Y L + A D GTP
Sbjct: 3285 ----------KINPKTG----GISVSEVLDYELCKRFY-LVVEAKDGGTP 3319
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 24/110 (21%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFR 67
F VKE+ P+G ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 729 FPSDVAVKEDLPVGANILKIKAYDAD-SGFNGKVLFTISDGNTDSCFNIDMETGQLK--- 784
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 785 ------------------VLMPMDREHTDL-YLLNITIYDLGNPQKSSWR 815
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y A + E+ P +++ + A DAD G N I YS+ G +F
Sbjct: 3025 NSPVCDQVAYTALLPEDIPSNKIILKVSAKDAD-IGSNGYIRYSLYGSGNSEFF------ 3077
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+DP + + + L LLDRE P+ Y+L +A D G
Sbjct: 3078 -----------LDPESGE----LKTLALLDRERIPV-YSLMAKATDGG 3109
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F ID
Sbjct: 933 SPAFIPSSYSVKVLEDLPVGTVIAWLETHDPD-LGLGGQVRYSLV-NDYNGRFEID---- 986
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 987 ----------------KASGAIRLSKELDYEKQQF-YNLTVRAKDKGRP 1018
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 25/120 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVF Y A V+ + GTL+ + A D D G N +++Y ++ D G+F I+ N
Sbjct: 2080 NSPVFVGLPYYAAVQVDAEPGTLIYQVTAIDKD-KGPNGEVTYVLQ--DDYGHFEINPNS 2136
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
G N+++ + + +++ + Y +T+ A D G P T P
Sbjct: 2137 G---------------------NVILKEAFNSDLSNIEYGVTILAKDGGKPSLSTSVELP 2175
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---------RGGDGL 52
N+PVF Y + E+ IGT +I ++A D D G N +++YSV G+
Sbjct: 827 NSPVFIQDSYSVNILESSGIGTEIIQVEARDKD-LGSNGEVTYSVLTDTQQFAINSSTGI 885
Query: 53 GYFT--IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLL 90
Y +D E N+ + + + ++ +++V LK+
Sbjct: 886 VYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVF 925
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++P F++ +Y+A+V E+ +G+ V+ + A D D G N+++ Y++ G+ F I+
Sbjct: 1562 HSPYFTNPLYEASVFESAALGSAVLQVTALDKD-KGENAELIYTIEAGNTGNMFKIE 1617
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG----LGYFTI 57
N PVF Y + E P+GT + ++A D D G N +++YS+ + F I
Sbjct: 2810 NKPVFETSSYDTIIMEGMPVGTKLTQVRAIDMD-WGANGQVTYSLHSDSQPEKVMEAFNI 2868
Query: 58 D-NEGPLNHFRIVPTKIDP 75
D N G ++ + + + DP
Sbjct: 2869 DSNTGWISTLKDLDHETDP 2887
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
P F YQA V EN IGT VI + A S + Y V+ GD G FTI+
Sbjct: 1669 PKFIHKDYQAEVNENVDIGTSVILISAIS------QSTLIYEVKDGDINGIFTIN 1717
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F Y+A+V+ + G LV ++A D D G NS+I+YS+
Sbjct: 2596 NAPQFMTVEYRASVRADVGRGHLVTQVQAIDPD-DGANSRITYSL 2639
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG--DGLGYFTIDN 59
N P+F Y T+ E IGT V+ + + DAD N + Y + + YF ID+
Sbjct: 2283 NPPIFDQPTYNTTLSEASLIGTPVLQVVSIDADSEN-NKMVHYQIVQDTYNSTDYFHIDS 2341
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L I+ ++LD E+ L +R++D G P
Sbjct: 2342 SSGL--------------------ILTARMLDHELVQ-HCTLKVRSIDSGFP 2372
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG 51
N PVFS Y V EN L+ ++A D D G+N K+ YS+ G
Sbjct: 3127 NPPVFSSDHYNTCVYENTATKALLTRVQAVDPD-IGINRKVVYSLADSAG 3175
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLV-------ITLKAADADPPGMNSKISYSVRGGDGLGY 54
NAPVF Y ++ E PI ++V + ++A DAD N+ + Y + +
Sbjct: 1765 NAPVFLFSQYSGSLSEAAPINSIVRSLDNSPLVIRATDAD-SNRNALLVYQIVESTAKKF 1823
Query: 55 FTIDN 59
FT+D+
Sbjct: 1824 FTVDS 1828
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+P+F Q + + P+G + + A D D + + Y + G+ LG+F ++
Sbjct: 574 NSPLFEKVACQGVISYDFPVGGHITAVSAIDIDELEL---VKYKIISGNELGFFYLN 627
>sp|Q9NYQ8|FAT2_HUMAN Protocadherin Fat 2 OS=Homo sapiens GN=FAT2 PE=1 SV=2
Length = 4349
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F+ FV+Q V+EN P GT VI + A D D G++ ++ Y +R G GL F+I+ +
Sbjct: 1027 LHPPHFASFVHQGQVQENSPSGTQVIVVAAQD-DDSGLDGELQYFLRAGTGLAAFSINQD 1085
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I L LDRE A Y LT+ AVD+G+ P
Sbjct: 1086 TGM--------------------IQTLAPLDREFASY-YWLTVLAVDRGSVP 1116
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 54/109 (49%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y V EN +G +++T+ A D D P +NS I+YS+ GG+ LG+FTI
Sbjct: 3319 PQFPQDPYSTRVLENALVGDVILTVSATDEDGP-LNSDITYSLIGGNQLGHFTI------ 3371
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+ + V K LDRE A Y+L LRA D G PP
Sbjct: 3372 --------------HPKKGELQVAKALDREQAS-SYSLKLRATDSGQPP 3405
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 40/92 (43%), Gaps = 18/92 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ Y+ +V EN G LV TLK DAD N +++ + GD LG F I G
Sbjct: 2902 NAPRFASEEYRGSVVENSEPGELVATLKTLDADISEQNRQVTCYITEGDPLGQFGISQVG 2961
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
E+ I K LDRE
Sbjct: 2962 ------------------DEWRISSRKTLDRE 2975
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P FS VY ++ E P T VI L A+D D G N +SY + G D +F I+
Sbjct: 2268 NPPTFSQLVYTTSISEGLPAQTPVIQLLASDQD-SGRNRDVSYQIVEDGSDVSKFFQIN- 2325
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G+ + + ++ LD E A +++ +RA+DKG PP
Sbjct: 2326 ----------------GSTGE---MSTVQELDYE-AQQHFHVKVRAMDKGDPP 2358
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP+F+ Y T+ EN P GT V+ + A D D G N ++YS+ G L
Sbjct: 454 HAPLFNRSSYDGTLDENIPPGTSVLAVTATDRD-HGENGYVTYSIAGPKAL--------- 503
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P IDP I K +D E+ Y +RA D G+P R
Sbjct: 504 --------PFSIDPYLGI----ISTSKPMDYELMKRIYTFRVRASDWGSPFR 543
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++ P F+ Y+A+V + GT ++ ++A DAD G+N+++ YS+ G+ G+F I+
Sbjct: 1550 LHPPRFTQLHYEASVPDTIAPGTELLQVRAMDAD-RGVNAEVHYSLLKGNSEGFFNIN 1606
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P S V+ +++E+ P+GT V+ L A D D K+++++ G+ +G+F I
Sbjct: 1133 NPPQMSQAVFYPSIQEDAPVGTSVLQLDAWDPDSSS-KGKLTFNITSGNYMGFFMIH--- 1188
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLD 91
P+ ++D + K+ +I+ + +LD
Sbjct: 1189 PVTGLLSTAQQLD--RENKDEHILEVTVLD 1216
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 46/111 (41%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y TV+EN PIG+ V+ L +D D P S+ + G N G
Sbjct: 3422 NPPRFFQLNYSTTVQENSPIGSKVLQLILSDPDSPENGPPYSFRITKG---------NNG 3472
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ FR+ P +V + L R A Y L ++A D G PP
Sbjct: 3473 --SAFRVTPDGW----------LVTAEGLSRR-AQEWYQLQIQASDSGIPP 3510
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR---GGDGLGYFTID 58
N PVF Y+A + EN P+GT VI + A D D G + ++SY + G + F ID
Sbjct: 2793 NRPVFEADPYKAVLTENMPVGTSVIQVTAIDKD-TGRDGQVSYRLSADPGSNVHELFAID 2851
Query: 59 NEG 61
+E
Sbjct: 2852 SES 2854
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 9/65 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F + +++++ P+G ++T+ A D D + Y + G+ L YF
Sbjct: 560 NQPMFEEVNCTGSIRQDWPVGKSIMTMSAIDVDEL---QNLKYEIVSGNELEYFD----- 611
Query: 62 PLNHF 66
LNHF
Sbjct: 612 -LNHF 615
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P S +Y V E+ G ++ + A D D N++I+YS+ G +
Sbjct: 3007 NSPQCSQLLYTGKVHEDVFPGHFILKVSATDLD-TDTNAQITYSLHGPGAHEF------- 3058
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
K+DP T + + L LDRE + +NL +A D G
Sbjct: 3059 ----------KLDPHTGE----LTTLTALDRERKDV-FNLVAKATDGG 3091
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F +Y+A + EN +GT VI L A D D G I Y++ F+I+ G
Sbjct: 2478 SPEFQQHLYEAELAENAMVGTKVIDLLAIDKD-SGPYGTIDYTIINKLASEKFSINPNGQ 2536
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
+ + K+D + ++ +K++ R+
Sbjct: 2537 IATLQ----KLD--RENSTERVIAIKVMARD 2561
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 24/118 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQ T+ E+ +GT + L DAD N ++ Y++
Sbjct: 816 NAPRFPPGGYQLTISEDTEVGTTIAELTTKDADSED-NGRVRYTLL-------------S 861
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
P F + P + +VV LDRE P Y L + A D+ + + + T
Sbjct: 862 PTEKFSLHPLTGE---------LVVTGHLDRESEP-RYILKVEARDQPSKGHQLFSVT 909
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N P F Y+A V E G LV+ ++A D D S++ Y + G+ +F I+ +
Sbjct: 2375 NPPEFRQPQYEANVSELATCGHLVLKVQAIDPDSRD-TSRLEYLILSGNQDRHFFINSSS 2433
Query: 61 GPLNHFRIVPTKID 74
G ++ F + +D
Sbjct: 2434 GIISMFNLCKKHLD 2447
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
+AP+FS Y + E+ P+G+ ++ + A S+++Y +R G+ G F++++
Sbjct: 1656 SAPIFSKSEYFVEIPESIPVGSPILLVSAMSP------SEVTYELREGNKDGVFSMNS 1707
>sp|Q5F226|FAT2_MOUSE Protocadherin Fat 2 OS=Mus musculus GN=Fat2 PE=2 SV=1
Length = 4351
Score = 60.1 bits (144), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+++P FS FVYQ V+EN P GT V+ + A D D G++ ++ Y +R G GL F+I+ +
Sbjct: 1027 LHSPHFSSFVYQGQVQENSPAGTQVMVVTAQD-DDSGLDGELQYFLRAGTGLEAFSINQD 1085
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ + L LDRE P Y LT+ AVD+G+ P
Sbjct: 1086 TGM--------------------LETLAPLDREFTPY-YWLTVLAVDRGSVP 1116
Score = 59.3 bits (142), Expect = 7e-09, Method: Composition-based stats.
Identities = 40/109 (36%), Positives = 57/109 (52%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y V EN +G +++T+ A+D D P +NS I+YS+ GG+ LG+FTID
Sbjct: 3321 PRFTHDLYTVRVLENAIVGDVILTVSASDDDGP-VNSVITYSLVGGNQLGHFTID----- 3374
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+ + V K LD E P Y+L +RA D G PP
Sbjct: 3375 ---------------PKKGKLQVAKALDWEQTP-SYSLRIRATDSGQPP 3407
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 52/113 (46%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+APVF+ Y+ T+ EN P GT V+T+ A D D G N I+YS+ G
Sbjct: 454 HAPVFNRSSYEGTLDENIPPGTSVLTVTATDQD-HGDNGHITYSIAGP------------ 500
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+ VP IDP I K +D E+ Y +RA D G+P R+
Sbjct: 501 -----KAVPFSIDPYLGV----ISTTKSMDYELMKRIYTFRVRASDWGSPFRQ 544
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+ +V EN G LV TLK DAD N +++ + GD LG F+I G
Sbjct: 2904 NPPRFASEDYRGSVVENNEPGELVATLKTLDADISEQNRQVTCYITEGDPLGQFSISQVG 2963
Query: 62 PLNHFRIVPTK 72
+ +RI K
Sbjct: 2964 --DEWRITSRK 2972
Score = 42.4 bits (98), Expect = 9e-04, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P FS VY +V E P T VI L A+D D G N +SY + G D +F I+
Sbjct: 2268 NPPTFSQLVYSTSVSEGSPAQTPVIQLLASDQD-SGQNQDVSYQIVEDGSDVSKFFRIN- 2325
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G+ + + I + LD E A + + +RA D+G PP
Sbjct: 2326 ----------------GSTGEMFTI---QELDYE-AHQHFRVKVRATDRGDPP 2358
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
+++P F+ Y+A V + GT ++ ++A DAD G N+++ YS G+ G+F ID+
Sbjct: 1550 LHSPHFTQPRYEANVPDTTTPGTELLQVRAVDAD-RGANAEVHYSFLKGNSEGFFNIDS 1607
Score = 37.0 bits (84), Expect = 0.032, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N P S V+ +VKE+ P+GT V+ L+A D D K+++++ G+ +G+F +
Sbjct: 1133 NIPSMSRPVFYPSVKEDAPLGTSVLQLEAWDPDFSS-QGKLTFNLTSGNHMGHFIV 1187
Score = 35.4 bits (80), Expect = 0.099, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY--SVRGGDGL-GYFTID 58
N PVF Y+A + EN P GT VI + A D D G + ++SY SV G + F +D
Sbjct: 2795 NRPVFEADPYKAFLTENMPGGTTVIQVTANDQD-TGSDGQVSYRLSVEPGSNIHQLFAVD 2853
Query: 59 NE 60
+E
Sbjct: 2854 SE 2855
Score = 35.0 bits (79), Expect = 0.12, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P S +Y V+E+ G ++ + A D D N++I+YS+ G +
Sbjct: 3009 NSPQCSQLLYTGKVREDVTPGHFILKVSAIDVD-MDTNAQITYSLHGPGAQEF------- 3060
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
K+DP T + + L +LDRE + YNL +A D G
Sbjct: 3061 ----------KLDPHTGE----LTTLSVLDRERKDV-YNLVAKATDGG 3093
Score = 33.1 bits (74), Expect = 0.59, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN-E 60
N P F + Y+A V E G LV+ ++A D D G S++ Y + G+ +F+I++
Sbjct: 2375 NPPEFREPQYEANVSELATCGHLVLKVQALDPD-IGDTSRLEYLILSGNQDRHFSINSTS 2433
Query: 61 GPLNHFRIVPTKID 74
G ++ F + ++D
Sbjct: 2434 GIISMFNLCKKQLD 2447
Score = 32.3 bits (72), Expect = 0.92, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 26/62 (41%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y V+EN PIG V+ L D D P + + G+ F + +G
Sbjct: 3424 NPPRFFQLNYSTAVQENSPIGIKVLQLILDDPDSPQNGPPYFFRITEGNTGSVFRVTPDG 3483
Query: 62 PL 63
L
Sbjct: 3484 WL 3485
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
+P F VY+A + EN +GT VI L A D D G + Y++
Sbjct: 2478 SPEFQQNVYEAELAENAKVGTKVIELLAIDKD-SGPYGTVDYTI 2520
Score = 30.0 bits (66), Expect = 4.0, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
+AP+FS Y + E+ PIG+ ++ + AA + S ++Y +R G+ F++++
Sbjct: 1656 SAPIFSKDEYFIEIPESVPIGSPILLISAASS------SDVTYELREGNKNSVFSMNS 1707
>sp|O88277|FAT2_RAT Protocadherin Fat 2 OS=Rattus norvegicus GN=Fat2 PE=1 SV=1
Length = 4351
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+++P FS FVYQ V+EN P GT V+ + A D D G++ ++ Y +R G GL F+I+ +
Sbjct: 1027 LHSPHFSSFVYQGQVQENSPAGTPVMVVTAQD-DDSGLDGELQYFLRAGTGLETFSINQD 1085
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ + L LDRE P Y LT+ AVD+G+ P
Sbjct: 1086 TGM--------------------LETLAPLDREFTPY-YWLTVLAVDRGSVP 1116
Score = 59.3 bits (142), Expect = 8e-09, Method: Composition-based stats.
Identities = 40/109 (36%), Positives = 57/109 (52%), Gaps = 22/109 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y V EN +G +++T+ A+D D P +NS I+YS+ GG+ LG+FTI+
Sbjct: 3321 PRFTHDLYTVRVLENAVVGDVILTVSASDDDGP-VNSAITYSLVGGNQLGHFTIN----- 3374
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
K+ + V K LD E P Y+L LRA D G PP
Sbjct: 3375 ---------------PKKGKLQVAKALDWEQTP-SYSLRLRATDSGQPP 3407
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 52/113 (46%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+APVF+ Y+ T+ EN P GT V+T+ A D D G N I+YS+ G
Sbjct: 454 HAPVFNRSSYEGTLDENIPPGTSVLTVTATDQD-HGDNGHITYSIAGP------------ 500
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+ VP IDP I K +D E+ Y +RA D G+P R+
Sbjct: 501 -----KAVPFSIDPLLGV----ISTTKPMDYELMKRIYTFRVRASDWGSPFRQ 544
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 32/60 (53%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+ +V EN G LV TLK DAD N +++ + GD LG F+I G
Sbjct: 2904 NPPRFASEDYRGSVVENNEPGELVATLKTLDADVSDQNRQVTCYITEGDPLGQFSISQVG 2963
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 47/113 (41%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P FS VY +V E P T VI L A+D D G N +SY + G D +F I+
Sbjct: 2268 NPPTFSQLVYTTSVSEGSPAQTPVIQLLASDQD-SGQNQDVSYQIVEDGSDVSKFFRING 2326
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I ++ LD E + + +RA+DKG PP
Sbjct: 2327 STG--------------------EIFTIQELDYETHQ-HFRVKVRAMDKGDPP 2358
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
+++P F+ Y+A V + GT ++ ++A DAD G N++I YS G+ G+F ID+
Sbjct: 1550 LHSPHFTQLRYEANVPDTTAPGTELLQVRAVDAD-RGANAEIHYSFLKGNSDGFFNIDS 1607
Score = 36.2 bits (82), Expect = 0.062, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI 57
N P S V+ +V E+ P+GT V+ L+A D D K+++++ G+ LG+F +
Sbjct: 1133 NIPSMSRPVFYPSVLEDAPLGTSVLQLEAWDPDSSS-QGKLTFNLTSGNHLGHFIV 1187
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY--SVRGGDGLG-YFTID 58
N PVF Y+A + EN P GT VI + A D D G + ++SY SV G + F +D
Sbjct: 2795 NRPVFEADPYKAFLTENMPGGTTVIQVTANDQD-TGSDGQVSYRLSVEPGSNIHELFAVD 2853
Query: 59 NE 60
+E
Sbjct: 2854 SE 2855
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P S +Y V+E+ G ++ + A D D N++I+YS+ G +
Sbjct: 3009 NSPQCSQLLYTGKVREDVTPGHFILKVSAIDVD-MDTNAQITYSLHGPGAQEF------- 3060
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
K+DP T + + L +LDRE + YNL +A D G
Sbjct: 3061 ----------KLDPHTGE----LTTLTVLDRERKDV-YNLVAKATDGG 3093
Score = 34.3 bits (77), Expect = 0.25, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 6/103 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y +V+EN PIG V+ L D D P + + G+ F + +G
Sbjct: 3424 NPPRFFQLNYSTSVQENSPIGIKVLQLILDDPDSPQNGPPYFFRITEGNTGSVFRVTPDG 3483
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLR 104
L T K +E+ + +++ D + PL + +R
Sbjct: 3484 WL------VTAASLSKKAREWYQLHIEVSDSGLPPLSSSTLVR 3520
Score = 33.1 bits (74), Expect = 0.55, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN-E 60
N P F + Y+A V E G LV+ ++A D D G S++ Y + G+ +F+I++
Sbjct: 2375 NPPKFREPQYEANVSELATCGHLVLKVQALDPD-IGDTSRLEYLILSGNQDRHFSINSTS 2433
Query: 61 GPLNHFRIVPTKID 74
G ++ F + ++D
Sbjct: 2434 GIISMFNLCKKQLD 2447
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
+APVFS Y + E+ PIG+ ++ L A G +S+++Y +R G+ F++++
Sbjct: 1656 SAPVFSKDEYFIEIPESVPIGSPILLLSA------GSSSEVTYELREGNKDSVFSMNS 1707
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N P F YQ T+ E+ +GT + LK DAD N ++ Y++
Sbjct: 816 NPPRFPPGGYQLTISEDTEVGTTIAELKTEDADSED-NRRVRYTL 859
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
+P F VY+A + EN +GT VI L A D D G + Y++
Sbjct: 2478 SPEFQQNVYEAELAENAKVGTKVIELLAIDKD-SGPYGTVDYTI 2520
Score = 29.6 bits (65), Expect = 5.8, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
P+FS Y+ T+ E++P+ + + + A DAD G N++ Y+
Sbjct: 146 PLFSPPSYRVTISEDRPLKSPICKVTATDAD-LGQNAEFYYA 186
>sp|Q8BNA6|FAT3_MOUSE Protocadherin Fat 3 OS=Mus musculus GN=Fat3 PE=1 SV=2
Length = 4555
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 52/112 (46%), Gaps = 22/112 (19%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ P F DF +VKEN IGT V+ + A D D G + +I YS+R G GLG F ID+E
Sbjct: 1037 LHTPYFPDFAVVGSVKENSRIGTSVLQVTAHDED-SGRDGEIQYSIRDGSGLGRFNIDDE 1095
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ I LDRE Y LT+ A D+G P
Sbjct: 1096 SGV--------------------ITAADSLDRETTA-SYWLTVYATDRGVVP 1126
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF+ VY+ VKE+ P G +V L D D +N ++SY + GG+ G F +
Sbjct: 2919 NAPVFAHEVYRGNVKESDPPGEVVAVLSTLDKDTSNINRQVSYHITGGNPRGQFAL---- 2974
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
G + E+ + V + LDRE + Y L + A D
Sbjct: 2975 --------------GMVQSEWKVYVKRPLDREEQDI-YFLNITASD 3005
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 25/109 (22%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P FS Y A V+EN GT VI ++A D D PG ++SYS+ F ID+ G
Sbjct: 2492 SPAFSQSTYVAEVRENAASGTKVIHVRATDGD-PGTYGQVSYSIINDFAKDRFLIDSNG- 2549
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLT--LRAVDKG 109
I+ + LDRE PL +++ LRA+D G
Sbjct: 2550 --------------------QIITTERLDRE-NPLEGDISIYLRALDGG 2577
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P FS VY A + E+ G VI L A D D N +I +S+ GGD F +D
Sbjct: 3336 NPPRFSQDVYSAVISEDALEGDSVILLIAEDVDSKP-NGQIRFSIVGGDRDNEFAVD--- 3391
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P+ +V K K LDRE GY+L ++AVD G P
Sbjct: 3392 PI--LGLVKVK---------------KKLDRERVS-GYSLLIQAVDSGIP 3423
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 17/106 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI---- 57
NAP+ S+ +Y V EN P VI ++A D D G N K++Y + G+ +F I
Sbjct: 1143 NAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPD-SGSNEKLTYRITSGNPQNFFAINIKT 1201
Query: 58 ----------DNEGPLNHFRIVPTKIDPGTKKKEYNI-VVLKLLDR 92
D E HF V T D G+ K+ I VV+++LD
Sbjct: 1202 GLITTTSRKLDREQQAEHFLEV-TVTDGGSSPKQSTIWVVVQVLDE 1246
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 51/114 (44%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y TV E+ +GT V+++ A D G N++I+Y +R G+ G F+I+
Sbjct: 3231 NPPVFERRDYLVTVPEDTSLGTQVLSVFATSKD-IGTNAEITYLIRSGNEQGKFSIN--- 3286
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
K I VL+ LD E Y L + A D GTP T
Sbjct: 3287 -----------------PKTGGISVLEALDYETCRRFY-LVVEAKDGGTPALST 3322
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV Y A++ E+ P +++ + A DAD G N I YS+ G +F
Sbjct: 3024 NSPVCDQVAYSASLPEDIPSNKIILKVSAKDAD-IGSNGDIRYSLYGSGNNEFF------ 3076
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+DP + + + L +LDRE P+ YNL RA D G
Sbjct: 3077 -----------LDPESGE----LKTLAVLDRERVPV-YNLIARATDGG 3108
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PVF+ Y A ++EN+P+GT ++ L D D S+S+ G+ F +D+ G
Sbjct: 3441 NSPVFTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPPFSFSILSGNEDEEFMLDSHG 3500
Query: 62 PL 63
L
Sbjct: 3501 IL 3502
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ +Y++ V E P G V ++A+DAD ++ ++ YS+ G+ F +D++
Sbjct: 2389 NPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDLD-RLEYSILSGNDRASFLMDSKS 2447
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 22/113 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ P F + +Y+ V E+ +GT V+T+ A+D D G N I+YS+ + L +
Sbjct: 467 HTPEFQEALYETFVNESVRVGTNVLTVSASDKD-KGENGYITYSIASLNLLPF------- 518
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRE 114
+N F V I + LD E +P Y +RA D G+P R
Sbjct: 519 AINQFTGV--------------ISTTEELDFESSPETYRFIVRASDWGSPYRH 557
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y A V EN L+ ++A D D G+N K+ YS+ G F+ID+
Sbjct: 3126 NPPVFSSNHYTACVYENTATKALLTRVQAMDPD-VGINRKVVYSLEDS-ASGVFSIDSSS 3183
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ IV+ + LDRE YN+++RA D+
Sbjct: 3184 GV--------------------IVLEQPLDRE-QQSSYNISVRATDQS 3210
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 25/120 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N+PVF Y A V+ + GTL+ + A D D G N +++Y ++ D G+F I+ N
Sbjct: 2079 NSPVFVGLPYYAAVQVDAEPGTLIYRVTAIDKD-KGANGEVTYVLQ--DDYGHFEINPNS 2135
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATP 120
G N+++ + + +++ + Y +T+ A D G P T+ P
Sbjct: 2136 G---------------------NVILREAFNSDLSNIDYGVTILAKDGGNPSLSTFVELP 2174
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F++ +Y+A+V E+ +G++V+ + A D D G N+++ YS+ G N G
Sbjct: 1561 HSPYFTNPLYEASVFESAALGSVVLQVTALDKD-KGENAELIYSIEAG---------NTG 1610
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVDKGTPP 112
N F+I P + T KE ++A +G + L+++ D+G+PP
Sbjct: 1611 --NTFKIEPV-LGIITISKE----------PDMAAMGQFVLSVKVTDQGSPP 1649
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGL----GYFTI 57
N PVF Y+ + E P+GT + ++A D D G N +++YS+ L F I
Sbjct: 2809 NKPVFETSTYETIIMEGMPVGTKLAQVRAIDMD-WGANGQVTYSLHSDSHLEKVIEAFNI 2867
Query: 58 D-NEGPLNHFRIVPTKIDPG 76
D N G ++ + + + DP
Sbjct: 2868 DSNTGWISTLKDLDHETDPA 2887
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 24/110 (21%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE-GPLNHFR 67
F VKE+ +GT ++ +KA DAD G N K+ +++ G+ F ID E G L
Sbjct: 728 FPSDVAVKEDMLVGTNILKIKAYDAD-SGFNGKVLFTISDGNTDSCFNIDMETGQLK--- 783
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
VL +DRE L Y L + D G P + +++
Sbjct: 784 ------------------VLMPMDREHTDL-YVLNITIYDLGKPQKSSWR 814
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
+P F Y V E+ P+GT++ L+ D D G+ ++ YS+ D G F +D
Sbjct: 932 SPAFIPSSYSVKVLEDLPVGTVIAWLETQDPD-LGLGGQVRYSLV-NDYNGRFEVD---- 985
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K I + K LD E YNLT+RA DKG P
Sbjct: 986 ----------------KASGAIRLSKELDYEKQQF-YNLTVRAKDKGRP 1017
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 12/100 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---------RGGDGL 52
N PVF Y ++ E+ IGT +I ++A D D G N ++ YSV G+
Sbjct: 826 NNPVFLQDSYSVSILESSSIGTEIIQVEARDKD-LGSNGEVMYSVLTDTHQFIINSSTGI 884
Query: 53 GYFT--IDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLL 90
Y +D E N+ + + + ++ +++V LK+
Sbjct: 885 VYIADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKIF 924
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 45/112 (40%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG--DGLGYFTIDN 59
N PVF Y T+ E+ IGT V+ L + DAD G N + Y + + YF ID+
Sbjct: 2282 NPPVFDQPTYNTTLSESSLIGTPVLQLVSTDAD-SGNNKLVRYQIVQDTYNSTDYFHIDS 2340
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
L I+ ++LD E+ L + A D G P
Sbjct: 2341 SSGL--------------------ILTARMLDHELVQ-HCTLKVTATDNGFP 2371
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 18/113 (15%)
Query: 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-------RGGDG-LGYFTIDNE 60
+V+ + E+ PI + P ++ + +Y+V G +G + +I +
Sbjct: 252 YVHIERINEHAPI------IHVVSHTPFSLDKEPTYAVVTVDDLDEGANGEIESLSIVDG 305
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
PL F + G EY + + +D E GYNLT++A DKG+P +
Sbjct: 306 DPLEQFFLAK----EGKWLNEYKVKERRQVDWESFSYGYNLTIQAKDKGSPQK 354
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F Y+A+V+ + G LV ++A D D G NS+I+YS+
Sbjct: 2595 NAPQFMTVEYRASVRADVGRGHLVTQVQALDPD-DGANSRITYSL 2638
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
P F+ YQA V EN IGT VI + A S + Y V+ G+ G FTI+
Sbjct: 1668 PKFTHKDYQAEVNENVDIGTSVILISAIS------QSTLIYEVKDGNINGVFTIN 1716
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N+P+F Q + + P+G + + A D D + + Y + G+ LG+F ++
Sbjct: 573 NSPLFEKVACQGVISYDFPVGGHITAISAIDIDELEL---VKYKIISGNELGFFYLN 626
>sp|Q14517|FAT1_HUMAN Protocadherin Fat 1 OS=Homo sapiens GN=FAT1 PE=1 SV=2
Length = 4588
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 55/112 (49%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS Y + E+ + VIT+ A DAD P NS I YS+ G+ FTID
Sbjct: 3331 NTPVFSQDTYTTVISEDAVLEQSVITVMADDADGPS-NSHIHYSIIDGNQGSSFTID--- 3386
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P + + + V KLLDRE GY LT++A D G+PPR
Sbjct: 3387 --------PVRGE---------VKVTKLLDRETIS-GYTLTVQASDNGSPPR 3420
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 58/116 (50%), Gaps = 22/116 (18%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
++ PVFS FV + TVKE+ P+G+LV+T+ A D D + +I YS+R G G+G F I E
Sbjct: 1029 LHPPVFSSFVEKGTVKEDAPVGSLVMTVSAHDED-ARRDGEIRYSIRDGSGVGVFKIGEE 1087
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+ I LDRE + Y LT+ A D+G P ++
Sbjct: 1088 TGV--------------------IETSDRLDRE-STSHYWLTVFATDQGVVPLSSF 1122
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F+ +Y+ TV E+ P G ++ L DAD +N +++Y + GGD LG F ++
Sbjct: 2916 PRFTAEIYKGTVSEDDPQGGVIAILSTTDADSEEINRQVTYFITGGDPLGQFAVE----- 2970
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD 107
T + E+ + V K LDRE Y LT+ A D
Sbjct: 2971 -------------TIQNEWKVYVKKPLDREKRD-NYLLTITATD 3000
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y+A EN PIGT V++L A D D G N ++YS+
Sbjct: 459 NPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPD-EGENGYVTYSIAN------------- 504
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
LNH VP ID T + + LD E+ P Y L +RA D G P R
Sbjct: 505 -LNH---VPFAIDHFTGA----VSTSENLDYELMPRVYTLRIRASDWGLPYR 548
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 58/119 (48%), Gaps = 25/119 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS-VRGGDGLGYFTIDNE 60
NAP FS Y TV EN GTL+ ++A DAD G+N KI YS + D G F+I+
Sbjct: 3121 NAPEFSADPYAITVFENTEPGTLLTRVQATDAD-AGLNRKILYSLIDSAD--GQFSINEL 3177
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
+ I + K LDRE+ + Y L+L+AVD+G P R T T
Sbjct: 3178 SGI--------------------IQLEKPLDRELQAV-YTLSLKAVDQGLPRRLTATGT 3215
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
VKENQP+G+ VI + + D D G N K+ Y+V GG+ F ID E +
Sbjct: 726 VKENQPVGSSVIFMNSTDLD-TGFNGKLVYAVSGGNEDSCFMIDMETGM----------- 773
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ +L LDRE Y L + D G P + ++
Sbjct: 774 ---------LKILSPLDRETTD-KYTLNITVYDLGIPQKAAWR 806
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV E+ +GT V+ + AA D N++I+YS+ G+ G F+ID+
Sbjct: 3226 NPPVFEYREYGATVSEDILVGTEVLQVYAASRDIEA-NAEITYSIISGNEHGKFSIDS-- 3282
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + Y LT+ A D GTP
Sbjct: 3283 ------------------KTGAVFIIENLDYE-SSHEYYLTVEATDGGTP 3313
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P+F +Y+A + E+ P G V +KA DAD ++ K+ YS+ G+ +F ID+
Sbjct: 2386 NPPLFEQQIYEARISEHAPHGHFVTCVKAYDADSSDID-KLQYSILSGNDHKHFVIDS 2442
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 10 VYQATVKENQPIGTLV-ITLKAADADPPGMNSKISYSVRGGDG-LGYFTIDNEGPLNHFR 67
V+ E P+ T V ++ D DP + +G +G + +I L FR
Sbjct: 245 VHIEQANECAPVITAVTLSPSELDRDPAYAIVTVDDCDQGANGDIASLSIVAGDLLQQFR 304
Query: 68 IVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
V + PG+K EY + + +D + P GYNLTL+A DKGTPP+
Sbjct: 305 TVRSF--PGSK--EYKVKAIGGIDWDSHPFGYNLTLQAKDKGTPPQ 346
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F+ Y+ V E+ +G++V+ + A D D G N+++ YS+ G+ +G
Sbjct: 1558 HAPWFTASSYKGRVYESAAVGSVVLQVTALDKD-KGKNAEVLYSIESGN-IG-------- 1607
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N F I P T K+ LDR Y+L ++A DKG+PP
Sbjct: 1608 --NSFMIDPVLGSIKTAKE---------LDRS-NQAEYDLMVKATDKGSPP 1646
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N+PVF Y+A + EN P G+ VI ++A+DAD G N ++ YS+
Sbjct: 2805 NSPVFESSPYEAFIVENLPGGSRVIQIRASDAD-SGTNGQVMYSL 2848
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 20/110 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y T+ E IGT V+ ++A D+D N ISY + G +
Sbjct: 2279 NPPVFAQQSYAVTLSEASVIGTSVVQVRATDSDSEP-NRGISYQMFGNHSKSH------- 2330
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+HF +D T I +L+ LD E + + +RAVD G P
Sbjct: 2331 --DHFH-----VDSSTGL----ISLLRTLDYE-QSRQHTIFVRAVDGGMP 2368
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 23/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ V+E+ P GT+++ L+A D D G + ++ YS+ G G F +D
Sbjct: 923 NPPTFIPPNYRVKVREDLPEGTVIMWLEAHDPD-LGQSGQVRYSLL-DHGEGNFDVD--- 977
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
K + +++ LD E + YNLT+RA DKG P
Sbjct: 978 -----------------KLSGAVRIVQQLDFEKKQV-YNLTVRAKDKGKP 1009
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 56/114 (49%), Gaps = 10/114 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVFS Y ++EN+P+G V+ L D D +++ G+ F ++ +G
Sbjct: 3436 NAPVFSRGNYSVIIQENKPVGFSVLQLVVTDEDSSHNGPPFFFTIVTGNDEKAFEVNPQG 3495
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDR---EIAPLGYNLTLRAVDKGTPP 112
++ T K+K++ ++ +K+ D +++ L Y + +R +++ P
Sbjct: 3496 ------VLLTSSAIKRKEKDHYLLQVKVADNGKPQLSSLTY-IDIRVIEESIYP 3542
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 21/114 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP S+ VY + EN P V+ ++A D D N K+ Y + G+ G+F+I +
Sbjct: 1135 NAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSS-NDKLMYKITSGNPQGFFSIHPK- 1192
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
T + T +K LDRE + L + D G+PP+ T
Sbjct: 1193 ---------TGLITTTSRK---------LDREQQD-EHILEVTVTDNGSPPKST 1227
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 20/114 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y+ + + GT V+ + A+DAD G N+ I+Y++ D+E
Sbjct: 2592 NAPQFRATKYEVNIGSSAAKGTSVVKVLASDAD-EGSNADITYAIEA---------DSES 2641
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ I K+ KE L L+ E + +RAVD G+P +E+
Sbjct: 2642 VKENLEI--NKLSGVITTKE----SLIGLENEF----FTFFVRAVDNGSPSKES 2685
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + Y A VK + +G ++ + A D D G N ++ Y ++ + +F I G
Sbjct: 2077 NAPVFVNLPYYAVVKVDTEVGHVIRYVTAVDRD-SGRNGEVHYYLK--EHHEHFQI---G 2130
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVL 87
PL + + + T KEY + V+
Sbjct: 2131 PLGEISL-KKQFELDTLNKEYLVTVV 2155
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NE 60
N P+F + T+ + +G + T+ A DAD + + Y + G+ L +F+++ N
Sbjct: 565 NTPLFEKINCEGTIPRDLGVGEQITTVSAIDADELQL---VQYQIEAGNELDFFSLNPNS 621
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE--IAPLGYNLTLRAVDK 108
G L+ R + +D K ++ + + D E PL N+T+ A K
Sbjct: 622 GVLSLKR---SLMDGLGAKVSFHSLRITATDGENFATPLYINITVAASHK 668
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
+++P F Y+ + EN P+ TLV+ +K D D G+ ++Y + F I+
Sbjct: 2487 LHSPAFLQNEYEVELAENAPLHTLVMEVKTTDGD-SGIYGHVTYHIVNDFAKDRFYINER 2545
Query: 61 GPL 63
G +
Sbjct: 2546 GQI 2548
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 27/108 (25%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NEGP 62
PVF Y A + E+ + + V+ ++A P G+ K+ YS+ GD FTI+ N G
Sbjct: 2180 PVFEKPFYSAEIAESIQVHSPVVHVQANS--PEGL--KVFYSITDGDPFSQFTINFNTGV 2235
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGT 110
+N V+ LD E P Y L++RA D T
Sbjct: 2236 IN---------------------VIAPLDFEAHP-AYKLSIRATDSLT 2261
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVIT-------LKAADADPPGMNSKISYSVRGGDGLGY 54
NAPVF Y + E+ I ++V+T ++AADAD N+ + Y + Y
Sbjct: 1761 NAPVFMQAEYTGLISESASINSVVLTDRNVPLVIRAADADKDS-NALLVYHIVEPSVHTY 1819
Query: 55 FTIDN 59
F ID+
Sbjct: 1820 FAIDS 1824
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+PV +Y T+ E+ G L++ + A DAD N++I+Y++ G +
Sbjct: 3019 NSPVCEKTLYSDTIPEDVLPGKLIMQISATDADIRS-NAEITYTLLGSGAEKF------- 3070
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
K++P T + + LDRE + Y+L +RA D G
Sbjct: 3071 ----------KLNPDTGE----LKTSTPLDREEQAV-YHLLVRATDGG 3103
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF+ +Y+A++ G VIT+ A DAD S++ YS+ G+ F++D
Sbjct: 1877 PVFAKPLYEASLLLPTYKGVKVITVNATDADSSAF-SQLIYSITEGNIGEKFSMD 1930
>sp|P33450|FAT_DROME Cadherin-related tumor suppressor OS=Drosophila melanogaster GN=ft
PE=1 SV=3
Length = 5147
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 55/113 (48%), Gaps = 24/113 (21%)
Query: 2 NAPVFSDFVYQATVKENQ--PIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N P F D Y A V EN P G V+T+ A DAD P +NS++ Y ++ GD
Sbjct: 2380 NRPTFLDSPYLARVMENTVPPNGGYVLTVNAYDADTPPLNSQVRYFLKEGDS-------- 2431
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ FRI + D I +LK LDRE Y LTL A+D G+PP
Sbjct: 2432 ----DLFRINASSGD---------IALLKPLDREQQS-EYTLTLVAMDTGSPP 2470
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F Y + V EN PI T V+T+ A D D G N I YS+ GD F ID+ G
Sbjct: 2023 NAPIFDPMSYSSEVFENVPIATEVVTVSAKDID-SGNNGLIEYSITAGDVDSEFGIDSNG 2081
Query: 62 PLNHFR 67
+ R
Sbjct: 2082 TIRTRR 2087
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 48/110 (43%), Gaps = 21/110 (19%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F Y +T+ E P+GT V T+KA D D N++ SYS+ G+ F ID
Sbjct: 3543 PEFIKHYYTSTISEAAPVGTKVTTVKAIDKDVRTQNNQFSYSIINGNLKQSFKID----- 3597
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ G I LDRE YNL + A+D G PP+
Sbjct: 3598 ---------VQTG------EISTASRLDREETST-YNLVIGAIDTGLPPQ 3631
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 22/104 (21%)
Query: 13 ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTK 72
ATV EN GT+V + D+D G+N + S + G+ LG+F ++ L+ R
Sbjct: 394 ATVDENAVNGTVVAAVAVKDSDS-GLNGRTSVRIVSGNELGHFRLEEAADLHIVR----- 447
Query: 73 IDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVDKGTPPRET 115
V +LDRE +G YNLT+ A+D+GTP R T
Sbjct: 448 -------------VNGVLDRE--EIGKYNLTVVAMDQGTPARTT 476
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 55/115 (47%), Gaps = 24/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF Y ATV+EN P GT V+T +A D D G+N+K+ +++ G+ + F ID+E
Sbjct: 2487 NDPVFELQSYHATVRENLPSGTHVLTPRATDKD-EGLNAKLRFNLL-GEHMHRFHIDSET 2544
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG-TPPRET 115
I LDRE + Y+LTL A D T PR +
Sbjct: 2545 G--------------------EISTATTLDREETSV-YHLTLMAQDSSITEPRAS 2578
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
M+ P FS YQ V EN+P+G+ ++T+ A D D G N + YS+ GG+ F++D
Sbjct: 3224 MDTPRFSVNSYQVIVPENEPVGSTILTVGATD-DDTGPNGMLRYSISGGNERQDFSVD 3280
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 58/145 (40%), Gaps = 35/145 (24%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
N+PVF Y A+V EN IG +V+ + A D D G N +I YS+ GD F+I +
Sbjct: 2274 NSPVFDPKQYSASVAENASIGAMVLQVSATDVD-EGANGRIRYSIVLGDQNHDFSISEDT 2332
Query: 61 ------GPLNHFRIVPTKI----------DPGTKKKEYNIVVLKLLDREIAPL------- 97
LN+ R+ + +P E I +L + D L
Sbjct: 2333 GVVRVAKNLNYERLSRYSLTVRAEDCALENPAGDTAELTINILDINDNRPTFLDSPYLAR 2392
Query: 98 ----------GYNLTLRAVDKGTPP 112
GY LT+ A D TPP
Sbjct: 2393 VMENTVPPNGGYVLTVNAYDADTPP 2417
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 22/115 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF Y A + E P G+ V ++ A D D G+N+++ Y + G+ L +F++D
Sbjct: 490 HEPVFEKSEYSAVLSELAPTGSFVASITATDED-TGVNAQVHYDILSGNELKWFSMD--- 545
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
PL IV LDREI L++ A D G P+ Y
Sbjct: 546 PLTGL-----------------IVTTGPLDREIRDT-VELSISARDGGPNPKFAY 582
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
NAP F+ + +V E P GT ++ +A+DAD G+NS++ +S+ G+ F ID+
Sbjct: 1380 NAPEFTQSSSEVSVLETSPTGTELMRFRASDAD-QGVNSQVVFSISAGNRRDTFHIDS 1436
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
NAP F Y T+ E GT + + DAD G+N + YS+ G+ G F +D+
Sbjct: 1274 NAPEFLRAPYHVTISEGASEGTHITHVFTQDAD-EGLNGDVYYSLAKGNEAGQFNLDSAT 1332
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLK 88
G L+ R ++D +++ + IVV K
Sbjct: 1333 GQLSLGR----RLDRESQEIHHLIVVAK 1356
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
N PVF+ Y + EN+P+GT V AAD D P N+ I Y+
Sbjct: 3330 NPPVFNHKEYHCYIPENKPVGTFVFQAHAADKDSP-KNAIIHYA 3372
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P F+ + EN+P GT ++TL A+D D P +Y + GG + ++D
Sbjct: 3647 NGPTFTPEGLNGYISENEPAGTSIMTLIASDPDLPRNGGPFTYQLIGGKHKSWLSVD 3703
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 19/108 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y V E G V +A D D G N+ + Y++ G D YF I+ +
Sbjct: 2592 NIPKFDSTTYNVAVPERISKGEFVFGARALDLD-DGENAVVHYTISGRDQ-HYFDINTKT 2649
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+V TK++ TK K ++ L Y + + A+D+G
Sbjct: 2650 G-----VVSTKLELKTKTKSHD------------DLTYTIVISAMDQG 2680
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 16/112 (14%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF + + EN I T+VI +KA D D G N I Y ++ + +
Sbjct: 2165 PVFIS-ANETAIMENVAINTVVIAVKAVDNDE-GRNGYIDYLMKEA---------RDEDM 2213
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+P ++P + + V+ LDRE+ Y L + A D+G PP+ T
Sbjct: 2214 GQSDPLPFSLNP----TDGQLRVVDALDRELRS-SYLLNITARDRGEPPQST 2260
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 44/111 (39%), Gaps = 26/111 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPV +Y A V E + L+ +KA+D D G N + Y ++ D G F I G
Sbjct: 2806 NAPVMEQLIYNAEVLEEESPPQLIAVVKASDRD-SGDNGNVIYRLQ-NDFDGTFEITESG 2863
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVDKGTP 111
I LDRE +G Y + AVD+G P
Sbjct: 2864 ---------------------EIYTRMRLDRE--EIGDYAFVVEAVDQGVP 2891
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 40/92 (43%), Gaps = 23/92 (25%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ ++ V EN IG+ VI + ++D D G N+ SYS +E
Sbjct: 2909 NPPKFTR-LFSLNVTENAEIGSFVIRVTSSDLD-LGANANASYSF------------SEN 2954
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE 93
P FRI P + NI V LDRE
Sbjct: 2955 PGEKFRIEP---------QSGNITVAGHLDRE 2977
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N P+F D VY + EN G V + A DAD G N+++SY V
Sbjct: 1918 NPPLFEDTVYSFDIPENAQRGYQVGQIVARDAD-LGQNAQLSYGV 1961
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 44/112 (39%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y + E Q LV + A D D G NS ISYS+ +
Sbjct: 3009 NAPEFEHSFYSFSFPELQQSIALVGQIIATDRDKQGPNSVISYSL-------------QQ 3055
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG-YNLTLRAVDKGTPP 112
P F I P + +KK V K +P Y LT+ A D G PP
Sbjct: 3056 PSPMFSIDPATGEVFSKKA----VRFKHSQYVRSPENMYALTVLATDNGKPP 3103
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 13/115 (11%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F + + E+ GT ++ A DAD Y + G+ +DN+
Sbjct: 152 NSPEFPEPSIAISFSESATSGTRLLLDAATDADVGENGVTDQYEIVAGN------VDNK- 204
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
FR+V T +P ++ LDRE + Y L + A D G+PPR Y
Sbjct: 205 ----FRLVTTA-NPSGDTSYLHLETTGNLDRE-SRGSYQLNISARDGGSPPRFGY 253
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP F++ + ++ EN P T V L A D D G N+++S+++ FTID
Sbjct: 1149 NAPQFTNSTFTFSIPENAPADTFVGKLTAVDRD-IGRNAELSFTL--SSQTQDFTID 1202
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N P+F +KE P+ T ++T+ A D D G+N K+SY++
Sbjct: 1485 NPPIFPSTAIVRQIKEGIPLKTPIVTVTADDPD-SGLNGKVSYAI 1528
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 44/114 (38%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+ PVF Y+ ++ E + T L A D D G N +ISY + G+ F + +G
Sbjct: 1045 HTPVFDHTSYETSLPETTKVNTRFFALAATDID-LGDNGRISYEIIEGNTERMFGVFPDG 1103
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
L F P LDRE Y LT+ D G P R +
Sbjct: 1104 YL--FVRAP-------------------LDREERDY-YALTVSCRDAGQPSRSS 1135
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY 44
N P+F Y ++ E GT V+T+ A+D D G NSKI+Y
Sbjct: 266 NPPIFDHSDYNVSLNETALPGTPVVTVMASDND-LGDNSKITY 307
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 18/100 (18%)
Query: 14 TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKI 73
+V EN+PIGT ++T+ A A +++I Y V G + G ++ + K+
Sbjct: 1722 SVYENEPIGTSILTVTAHLA-----SAEIEYFVTNVTATG-----SRGQVDRLFDIDAKL 1771
Query: 74 DPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ E LDRE P Y + + A+ G PR
Sbjct: 1772 GILSTAAE--------LDREAGPEEYEVEVYAIALGGQPR 1803
>sp|Q9ULB5|CADH7_HUMAN Cadherin-7 OS=Homo sapiens GN=CDH7 PE=2 SV=2
Length = 785
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G N+++ Y + GDGLG F
Sbjct: 258 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-IGANAEMEYKIVDGDGLGIF------ 310
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
KI + +E I + K LD E A Y L + A +K PR
Sbjct: 311 ----------KISVDKETQEGIITIQKELDFE-AKTSYTLRIEAANKDADPR 351
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNEGP 62
PVFS +Y V E +G ++ T+ A DP NS + YS+ R D YF ID
Sbjct: 375 PVFSSPLYPMEVSEATQVGNIIGTVAA--HDPDSSNSPVRYSIDRNTDLERYFNIDANSG 432
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I K LDRE + +N+T+ A++ P +
Sbjct: 433 V--------------------ITTAKSLDRETNAI-HNITVLAMESQNPSQ 462
>sp|Q8BM92|CADH7_MOUSE Cadherin-7 OS=Mus musculus GN=Cdh7 PE=2 SV=1
Length = 785
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G+N+++ Y + GDGLG F
Sbjct: 258 NPPRFPRRSYQYNVPESLPVASVVARIKAADAD-IGVNAEMEYKIVDGDGLGIF------ 310
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
KI +E I + K LD E A Y L + A ++ PR
Sbjct: 311 ----------KISADKDTQEGIITIQKELDFE-AKTSYTLRIEAANRDADPR 351
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNEGP 62
PVFS +Y V E +G ++ T+ A DP NS + YS+ R D YF ID
Sbjct: 375 PVFSSPLYPMEVSEATQVGHIIGTVAA--HDPDSSNSPVRYSIDRNTDLERYFNIDANSG 432
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I K LDRE + +N+T+ A++ P +
Sbjct: 433 V--------------------ITTAKSLDRETNAV-HNITVLAMESQNPSQ 462
>sp|Q5DWV2|CADH7_RAT Cadherin-7 OS=Rattus norvegicus GN=Cdh7 PE=2 SV=1
Length = 785
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ E+ P+ ++V +KAADAD G+N+++ Y + GDGLG F
Sbjct: 258 NPPRFPRRSYQYNGPESLPVASVVARIKAADAD-IGVNAEMEYKIVDGDGLGIF------ 310
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
KI P +E I + K LD E A Y L + A ++ PR
Sbjct: 311 ----------KISPDKDTQEGIITIQKELDFE-AKTSYTLRIEAANRDADPR 351
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 24/111 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNEGP 62
PVFS +Y V E +G ++ T+ A DP NS + YS+ R D YF ID
Sbjct: 375 PVFSSPLYPMEVSEATQVGHIIGTVAA--HDPDSSNSPVRYSIDRNTDLERYFNIDANSG 432
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I K LDRE P+ +N+T+ A++ P +
Sbjct: 433 I--------------------ITTAKSLDRETNPV-HNITVLAMESQNPSQ 462
>sp|Q9V5N8|STAN_DROME Protocadherin-like wing polarity protein stan OS=Drosophila
melanogaster GN=stan PE=1 SV=4
Length = 3579
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 19/110 (17%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP+F + Y A+V E+ P+GT V+ + A D+D G+N++I+YS+ NE
Sbjct: 894 APIFENAPYSASVFEDAPVGTTVLVVSATDSD-VGVNAQITYSL------------NEES 940
Query: 63 LNHF-RIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
+N P I+P T IV LDRE GY LT+ A D G P
Sbjct: 941 INGLGSPDPFSINPQTGA----IVTNAPLDRETTS-GYLLTVTAKDGGNP 985
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 42/112 (37%), Positives = 57/112 (50%), Gaps = 23/112 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDNE 60
NAP F +YQA++ E+ +GT VI + A+D D G+N +I Y + D G F ID
Sbjct: 1003 NAPAFKSPLYQASILEDALVGTSVIQVAASDPD-VGLNGRIKYLLSDRDIEDGSFVID-- 1059
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
PT GT + K LDRE + ++LT AVDKG+PP
Sbjct: 1060 ---------PTS---GTIRTN------KGLDRESVAV-FHLTAIAVDKGSPP 1092
Score = 42.7 bits (99), Expect = 6e-04, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F +Q +V EN P+G +I ++A D+D G N++I+YS+ D DN
Sbjct: 685 NAPRFYTSQFQESVLENVPVGYNIIRVQAYDSD-EGANAEITYSISERD-------DN-- 734
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P +DP T + +K LDRE + + A D G PP+
Sbjct: 735 -------FPLAVDPRTGW----VQTIKPLDRE-EQGRFAFQVVAKDGGVPPK 774
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 25/115 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGT---LVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P FS+ Y V E+Q GT V ++A DAD G N+ I Y++ GG+ F+ID
Sbjct: 577 NYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQ-GNNAAIRYAIIGGNTQSQFSID 635
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ ++ ++K LD E + Y L +RA D G+P R
Sbjct: 636 SMSG--------------------DVSLVKPLDYE-SVRSYRLVIRAQDGGSPSR 669
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 15/119 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG-GDGLGYFTIDNE 60
++P F ++A+++E +G+ VITL+A D D G N++I Y + DG G D E
Sbjct: 460 HSPTFEAEQFEASIREGATVGSTVITLRATDQD-IGKNAEIEYGIEAVTDGAG-LAQDQE 517
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKAT 119
P+ FRI + I LDRE + Y+L + A D + E AT
Sbjct: 518 MPI--FRI---------DSRSGVISTRSSLDRETSD-SYHLLVTAADLASAQSERRTAT 564
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F+ Y+A V E+QP GT V T+ A D P +S++ Y + G+ G F I ++
Sbjct: 790 NDPAFNPKYYEANVGEDQPPGTPVTTVTATD---PDEDSRLHYEITTGNTRGRFAITSQ 845
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT-IDNEGP 62
P F+ V EN P+G++V + A D D G+N+ + YS+ GGD F+ + G
Sbjct: 1111 PTFASDKITLYVPENSPVGSVVGEIHAHDPD-EGVNAVVHYSIIGGDDSNAFSLVTRPGS 1169
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVV 86
+ T++D + +K + +VV
Sbjct: 1170 ERAQLLTMTELDYESTRKRFELVV 1193
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 47/125 (37%), Gaps = 24/125 (19%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADA-DPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+P F +Y A+V E QP G V T++A D D P + S +S L F +D+
Sbjct: 356 SPYFEQALYVASVLEEQPAGAAVTTVRARDPEDSPVVYSMVSLLDSRSQSL--FKVDSRT 413
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121
+ + LDRE+ + Y + A D PPR
Sbjct: 414 GV--------------------VTTSASLDRELMDVHY-FRVVATDDSFPPRSGTTTLQV 452
Query: 122 NGLTC 126
N L C
Sbjct: 453 NVLDC 457
>sp|P33151|CADH5_HUMAN Cadherin-5 OS=Homo sapiens GN=CDH5 PE=1 SV=5
Length = 784
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ ++ A+V E+ +GT VI++ A DAD P + S + G YF IDN G
Sbjct: 147 NWPVFTHRLFNASVPESSAVGTSVISVTAVDADDPTVGDHASVMYQILKGKEYFAIDNSG 206
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
+ I TK K+ Y IVV
Sbjct: 207 RI----ITITKSLDREKQARYEIVV 227
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y V E+ +GT V +L D D P N YS+ GD FTI+
Sbjct: 254 NFPFFTQTKYTFVVPEDTRVGTSVGSLFVEDPDEP-QNRMTKYSILRGDYQDAFTIETNP 312
Query: 62 PLNHFRIVPTK 72
N I P K
Sbjct: 313 AHNEGIIKPMK 323
>sp|Q8BIZ0|PCD20_MOUSE Protocadherin-20 OS=Mus musculus GN=Pcdh20 PE=2 SV=2
Length = 925
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF + + T++EN + L A DAD G ++SY + G D YF++D+
Sbjct: 505 NAPVFLQPLIELTIEENNAPNAFLTKLYATDADS-GEMGRVSYFL-GPDAPSYFSLDS-- 560
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ V T++D K+K Y T+RAVD GTPPRE+
Sbjct: 561 -VTGILTVSTQLDREEKEK------------------YRYTVRAVDCGTPPRES 595
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
N P+F D TV N +GT V T++A D D G N++I+YS
Sbjct: 290 NCPLFIDSQINVTVYGNATVGTPVATVQAVDRD-LGTNAQITYS 332
>sp|P55284|CADH5_MOUSE Cadherin-5 OS=Mus musculus GN=Cdh5 PE=1 SV=2
Length = 784
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 49/89 (55%), Gaps = 12/89 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGM--NSKISYSVRGGDGLGYFTIDN 59
N PVFS V+ A+V E IGT VI + A DAD P + ++ + Y + G+ YF+IDN
Sbjct: 145 NWPVFSHQVFNASVPEMSAIGTSVIRVTAVDADDPTVAGHATVLYQIVKGNE--YFSIDN 202
Query: 60 EGPLNHFRIVPTKID--PGTKKKEYNIVV 86
G ++ TKI K+ EY IVV
Sbjct: 203 SG------LIFTKIKNLDREKQAEYKIVV 225
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVF+ Y +V E+ +G + L D D P N YS+ G+ FTI+ +
Sbjct: 252 NFPVFTQSTYTFSVPEDIRVGKPLGFLTVVDPDEP-QNRMTKYSIMQGEYRDTFTIETDP 310
Query: 62 PLNHFRIVPTK 72
N I PTK
Sbjct: 311 KRNEGIIKPTK 321
>sp|Q24292|DS_DROME Protein dachsous OS=Drosophila melanogaster GN=ds PE=1 SV=3
Length = 3503
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 26/120 (21%)
Query: 2 NAPVFSDFVYQA-TVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGLGYFTI 57
NAP +D +V+E QP GT V+ ++A D D G N+ I+YS+ R DG G F+I
Sbjct: 1199 NAPEIADPQEDVVSVREEQPPGTEVVRVRAVDRD-HGQNASITYSIVKGRDSDGHGLFSI 1257
Query: 58 DNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
D + R+V LD E + Y L + A D G PPRET +
Sbjct: 1258 DPTSGVIRTRVV--------------------LDHEERSI-YRLGVAASDGGNPPRETVR 1296
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFT 56
N P+F Y +V EN+P+G ++ + A+D D G+N+ ++Y++ G+G + T
Sbjct: 554 NEPIFDQSFYNVSVAENEPVGRCILKVSASDPD-CGVNAMVNYTI--GEGFKHLT 605
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 23/108 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F Y +V+E+ P+GT V+ + A DAD G+N+++ YS+ + F ID +
Sbjct: 1895 NAPRFKLSKYTGSVQEDAPLGTSVVQISAVDAD-LGVNARLVYSL-ANETQWQFAIDGQS 1952
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
L I + LDRE+ YN + A D G
Sbjct: 1953 GL--------------------ITTVGKLDRELQA-SYNFMVLATDGG 1979
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NEG- 61
P+F Y VKE+ P GT+V ++ AA D S + YS+ GD GYF+I+ N G
Sbjct: 772 PIFEKARYNYYVKEDIPRGTVVGSVIAASGD-VAHRSPVRYSIYSGDPDGYFSIETNSGN 830
Query: 62 -----PLNH 65
PL+H
Sbjct: 831 IRIAKPLDH 839
Score = 37.4 bits (85), Expect = 0.030, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 50/112 (44%), Gaps = 14/112 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N PVF Y V E++ I +I + A+D D G N++I+Y + G D + +I +
Sbjct: 979 NPPVFEKDEYSVNVSESRSINAQIIQVNASDLD-TGNNARITYRIVDAGVDNVTN-SISS 1036
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
HF I P I + LDRE Y LT+ A D GTP
Sbjct: 1037 SDVSQHFGIFPN---------SGWIYLRAPLDRETRDR-YQLTVLATDNGTP 1078
Score = 36.6 bits (83), Expect = 0.046, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 16/112 (14%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
V +NQP T+ + + DA P KIS S + G+ + ++ + + V ++
Sbjct: 333 VNDNQP--TINVIFLSDDASP-----KISESAQPGEFVARISVHDPDSKTEYANVNVTLN 385
Query: 75 PG-------TKKKEYNIVVLKL-LDREIAPLGYNLTLRAVDKGTPPRETYKA 118
G T+ +V++ L LDREI Y L++ A DKGTPP K+
Sbjct: 386 GGDGHFALTTRDNSIYLVIVHLPLDREIVS-NYTLSVVATDKGTPPLHASKS 436
Score = 36.6 bits (83), Expect = 0.050, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P FS + ATV E GT V + A D+D G N+++ Y + G+ F I+
Sbjct: 2265 NSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSD-AGSNARLRYHIVDGNHDNAFVIEPA- 2322
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
IV T I +LDREI + Y L + A D+G P
Sbjct: 2323 ---FSGIVRTNI---------------VLDREIRDI-YKLKIIATDEGVP 2353
Score = 35.8 bits (81), Expect = 0.087, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 50/116 (43%), Gaps = 24/116 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P+F+ Y ATV EN +GT V+ + A+D D N + Y++ R D F
Sbjct: 229 NQPIFNQSRYFATVPENATVGTSVLQVYASDTD-ADENGLVEYAINRRQSDKEQMF---- 283
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+IDP T I + K LD E L + L + A D G P ET
Sbjct: 284 ------------RIDPRTGA----IYINKALDFETKEL-HELVVVAKDHGEQPLET 322
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 26/113 (23%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F Y+ ++EN G++V + A+D D G N+ I YS+
Sbjct: 1096 NDPKFQKSKYEFRIEENLRRGSVVGVVTASDLD-LGENAAIRYSLL-------------- 1140
Query: 62 PLN-HFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P+N F++ P + T++ LDRE+ L Y+L + A D+GTP R
Sbjct: 1141 PINSSFQVHPVTGEISTREP---------LDRELREL-YDLVVEARDQGTPVR 1183
Score = 33.9 bits (76), Expect = 0.32, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 48/111 (43%), Gaps = 20/111 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F +Y A V E GT V+ + A D D G+NS ++YS+ E
Sbjct: 447 NPPEFEQDLYHANVMEVADPGTSVLQVLAHDRD-EGLNSALTYSLA------------ET 493
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P H + +IDP T I +D E P+ LT+ A D G PP
Sbjct: 494 PETHAQWF--QIDPQTGL----ITTRSHIDCETEPVP-QLTVVARDGGVPP 537
Score = 32.3 bits (72), Expect = 0.81, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 2 NAPVFSDFV-YQATVKENQPIGTLVITLKAADADPPGM-NSKISYSVRGGDGLGYFTIDN 59
N P+F Y+A + E P+ + L+A DAD NS++ Y + G+ FTID
Sbjct: 2695 NFPIFDRSAKYEAEISELAPLRYSIAQLQAIDADQENTPNSEVVYDITSGNDEHMFTID- 2753
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVV 86
+ V ++D + K Y +++
Sbjct: 2754 --LVTGVLFVNNRLDYDSGAKSYELII 2778
Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N P F VY+AT+ EN P G+ V+ + A N+ +SY + G F +D
Sbjct: 1662 NPPRFLQAVYRATILENVPSGSFVLQVTAKSLH-GAENANLSYEIPAGVANDLFHVD 1717
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 44/111 (39%), Gaps = 15/111 (13%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F EN P L A D D N++ Y++ G+
Sbjct: 117 NAPTFPQTSMHIEFPENTPREVKRTLLPARDLDLEPYNTQ-RYNIVSGN----------- 164
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ FR+ + G + I LDRE P GY+L + A+D GTPP
Sbjct: 165 VNDAFRLSSHRERDGVLYLDLQIS--GFLDRETTP-GYSLLIEALDGGTPP 212
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 6 FSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
F + Y+ +KEN P GT ++ + A +D G K+ +S G+ G ++D+
Sbjct: 2113 FQNETYRVMLKENSPSGTRLLQVVALRSD--GRRQKVQFSFGAGNEDGILSLDS 2164
Score = 29.6 bits (65), Expect = 5.9, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP F + + +V E+ +G + A D D G + +++YS+ G G F ID
Sbjct: 874 NAPEFEASMVRISVPESAELGAPLYAAHAHDKD-SGSSGQVTYSLVKESGKGLFAID 929
>sp|Q90763|CADH7_CHICK Cadherin-7 OS=Gallus gallus GN=CDH7 PE=2 SV=1
Length = 785
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ V E+ P+ ++V +KAADAD G N+++ Y + GDGLG F I
Sbjct: 258 NPPRFPRRSYQYNVPESLPLASVVARIKAADAD-VGPNAEMEYKIVDGDGLGVFKI---- 312
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+D T +E I + K LD E A Y L + A + PR
Sbjct: 313 ----------SVDKDT--QEGIITIQKELDFE-AKTSYTLRIEAANMHVDPR 351
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y A V E P+GT V+ + A DAD P G ++++ YS+ G YF+++
Sbjct: 149 NEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ--PYFSVE 205
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 24/111 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNEGP 62
PVF+ +Y V E +GT++ T+ A DP NS + YS+ R D YF ID
Sbjct: 375 PVFTSRLYSMVVSEAAKVGTIIGTVAA--HDPDASNSPVRYSIDRNTDLERYFNIDANSG 432
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ I K LDRE + +N+T+ A++ P +
Sbjct: 433 V--------------------ITTAKSLDRETNAV-HNITVLAMESQNPAQ 462
>sp|Q9Y5E1|PCDB9_HUMAN Protocadherin beta-9 OS=Homo sapiens GN=PCDHB9 PE=2 SV=2
Length = 797
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 20/108 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ +Y+ EN P+G+L++ + A DAD G+N+++SYS F +E
Sbjct: 238 NAPQFAQALYETQAPENSPVGSLIVKVSAGDAD-SGVNAEVSYS---------FFDASED 287
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
L F+I P + I + +LLD E+ Y + ++A+D G
Sbjct: 288 ILTTFQINPFSGE---------IFLRELLDYELVN-SYKINIQAMDGG 325
Score = 29.6 bits (65), Expect = 6.0, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F+ Y V+EN + ++ A D D G N++++YS+
Sbjct: 447 NAPAFTQTSYTLFVRENNSPALHIGSVSATDRD-SGTNAQVTYSL 490
>sp|Q5DRB6|PCDG4_PANTR Protocadherin gamma-A4 OS=Pan troglodytes GN=PCDHGA4 PE=3 SV=1
Length = 931
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
NAPVF+ Y +V EN P+GTL++T+KA D D G N ++YS R
Sbjct: 238 NAPVFTQPEYHVSVHENVPVGTLLLTVKATDPD-EGANGDVTYSFR 282
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP + ++V+E GT++ D+D GG+GL +I +
Sbjct: 343 NAPEVTVTSLTSSVQETSSPGTVIALFNVHDSD------------SGGNGLVTCSIPDNL 390
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
P + T Y ++ + LDRE YN+T+ A D+GTPP T
Sbjct: 391 PFTLEK---------TYGNYYRLLTHRTLDREEVS-EYNITVTATDQGTPPLST 434
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N P F Y A V EN P G ++++ A D D G N++I+YS+
Sbjct: 448 NPPTFPHASYSAYVPENNPRGASILSMTAQDPD-SGDNARITYSL 491
>sp|Q91838|CAD20_XENLA Cadherin-20 OS=Xenopus laevis GN=cdh20 PE=2 SV=1
Length = 790
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 12/126 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P F D Y A+V E P+GT +I + A DAD P G ++++ YS+ G YF++D+
Sbjct: 154 NEPKFLDGPYTASVPEMSPVGTSIIQVSATDADDPTYGSSARVVYSILQGQ--PYFSVDS 211
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTP--PR 113
+ + R T +D ++ I+ K + ++ L N+TL V+ P P+
Sbjct: 212 KTGI--IRTALTNMDRESRDYYEVIIQAKDMGGQLGGLAGTTTVNVTLSDVNDNPPRFPQ 269
Query: 114 ETYKAT 119
+ Y+ +
Sbjct: 270 KHYQMS 275
Score = 33.5 bits (75), Expect = 0.38, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTID 58
PVF Y V EN IGT + + A DP N+ + YS+ R D YF +D
Sbjct: 380 PVFGSSFYFVEVSENVDIGTTIQIVSA--KDPDATNNSVRYSIDRSSDPGRYFYVD 433
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F+ F + + EN L+ T+ A D D P ISYS+
Sbjct: 483 NAPTFTKFS-ETLMCENAKADQLIQTVSAVDQDDPQEGQHISYSL 526
>sp|Q3SWX5|CADH6_BOVIN Cadherin-6 OS=Bos taurus GN=CDH6 PE=2 SV=1
Length = 790
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P+F+ VY ATV E +GT V+ + A DAD P G ++K+ YS+ G YF++++
Sbjct: 155 NEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQ--PYFSVES 212
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTP--PR 113
E + + +D +++ ++ K + ++ L N+TL V+ P P+
Sbjct: 213 ETGI--IKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQ 270
Query: 114 ETYK 117
TY+
Sbjct: 271 STYQ 274
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ E+ P GT + +KA+DAD G N++I YS+ G+GL F + +
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDAD-VGENAEIEYSITEGEGLDMFDVITDQ 322
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
I K+ KKK Y + V
Sbjct: 323 ETQEGIITVKKLLDFEKKKVYTLKV 347
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 24/113 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNEGP 62
PVFS Y ++E+ I T + ++ A DP + + YSV R D F ID+
Sbjct: 381 PVFSKLAYILQIREDAQINTTIGSVTA--QDPDAARNPVKYSVDRHTDMDRIFNIDSGNG 438
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+I KLLDRE L +N+T+ A + P + +
Sbjct: 439 --------------------SIFTSKLLDRETL-LWHNITVIATEINNPKQSS 470
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
N P F++F Y+ V E L+ TL+A D D P + S+S+ G + DN
Sbjct: 484 NPPEFAEF-YETFVCEKAKADQLIQTLRAIDKDDPYSGHQFSFSLAPEAASGSNFTIQDN 542
Query: 60 E 60
+
Sbjct: 543 K 543
>sp|P55285|CADH6_HUMAN Cadherin-6 OS=Homo sapiens GN=CDH6 PE=1 SV=1
Length = 790
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P+F+ VY ATV E +GT V+ + A DAD P G ++K+ YS+ G YF++++
Sbjct: 155 NEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQ--PYFSVES 212
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTP--PR 113
E + + +D +++ ++ K + ++ L N+TL V+ P P+
Sbjct: 213 ETGI--IKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQ 270
Query: 114 ETYK 117
TY+
Sbjct: 271 STYQ 274
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ E+ P GT + +KA+DAD G N++I YS+ G+GL F + +
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDAD-VGENAEIEYSITDGEGLDMFDVITDQ 322
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
I K+ KKK Y + V
Sbjct: 323 ETQEGIITVKKLLDFEKKKVYTLKV 347
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
NAP F++F Y+ V E L+ TL A D D P + S+S+ G + DN
Sbjct: 484 NAPEFAEF-YETFVCEKAKADQLIQTLHAVDKDDPYSGHQFSFSLAPEAASGSNFTIQDN 542
Query: 60 E 60
+
Sbjct: 543 K 543
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 24/113 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNEGP 62
PVFS Y ++E+ I T + ++ A DP + + YSV R D F ID+
Sbjct: 381 PVFSKLAYILQIREDAQINTTIGSVTA--QDPDAARNPVKYSVDRHTDMDRIFNIDSGNG 438
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+I KLLDRE L +N+T+ A + P + +
Sbjct: 439 --------------------SIFTSKLLDRETL-LWHNITVIATEINNPKQSS 470
>sp|O88278|CELR3_RAT Cadherin EGF LAG seven-pass G-type receptor 3 OS=Rattus norvegicus
GN=Celsr3 PE=2 SV=1
Length = 3313
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 51/115 (44%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
NAP F Y V E+ P T V+ + A D D N ++ Y+ + G DG G FTI+
Sbjct: 948 NAPQFVASHYTGLVSEDAPPFTSVLQISATDRDAHA-NGRVQYTFQNGEDGDGDFTIEPT 1006
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ + ++ LDRE P+ Y LT AVD+G PP T
Sbjct: 1007 SGI--------------------VRTVRRLDREAVPV-YELTAYAVDRGVPPLRT 1040
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y + E+ +GT V+++ A D D NS ISY + GG+ F I +G
Sbjct: 743 NRPEFTMKEYHLRLNEDAAVGTSVVSVTAVDRDA---NSAISYQITGGNTRNRFAISTQG 799
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREI 94
+ +V + K++ Y +VL DR +
Sbjct: 800 GMG---LVTLALPLDYKQERYFKLVLTASDRAL 829
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG 48
++P+F +Q +V EN P+G VI ++A DAD G NS++ YS+ G
Sbjct: 638 HSPIFVSTPFQVSVLENAPLGHSVIHIQAVDAD-HGENSRLEYSLTG 683
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS+ Y A V+E+ T+V+ + A D D N + Y++ G+ G+F ID+
Sbjct: 532 NAPQFSEKRYVAQVREDVRPHTVVLRVTATDKDKDA-NGLVHYNIISGNSRGHFAIDS-- 588
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I V+ LD E A Y L +RA D G PP
Sbjct: 589 ------------------LTGEIQVMAPLDFE-AEREYALRIRAQDAGRPP 620
Score = 37.7 bits (86), Expect = 0.024, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF Y ++ E++P+G+ V+ + A+D D G N++I+Y + D L F ID
Sbjct: 847 PVFQSAHYSVSMNEDRPVGSTVVVISASD-DDVGENARITYLLE--DNLPQFRID 898
Score = 35.8 bits (81), Expect = 0.073, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAPVF ++ VKEN +G++V + A D D G N+ I Y + G+ F +D
Sbjct: 1054 NAPVFPAEEFEVRVKENSIVGSVVAQITAVDPD-DGPNAHIMYQIVEGNIPELFQMD 1109
Score = 33.5 bits (75), Expect = 0.36, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG---GDGLGYFTIDNE 60
P F + YQ V EN+ GT V+ + A D D PG ++ YS+ L F+ID +
Sbjct: 314 PQFPQYNYQTLVPENEAAGTAVLRVVAQDPD-PGEAGRLVYSLAALMNSRSLELFSIDPQ 372
Query: 61 GPL 63
L
Sbjct: 373 SGL 375
Score = 32.3 bits (72), Expect = 0.81, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG 48
+APVF Y+ T++EN G ++ L+A D D P N+ + Y G
Sbjct: 420 HAPVFEQAQYRETLRENVEEGYPILQLRATDGDAPP-NANLRYRFVG 465
>sp|Q91ZI0|CELR3_MOUSE Cadherin EGF LAG seven-pass G-type receptor 3 OS=Mus musculus
GN=Celsr3 PE=2 SV=2
Length = 3301
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 51/115 (44%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG-DGLGYFTIDNE 60
NAP F Y V E+ P T V+ + A D D N ++ Y+ + G DG G FTI+
Sbjct: 948 NAPQFVASHYTGLVSEDAPPFTSVLQISATDRDAHA-NGRVQYTFQNGEDGDGDFTIEPT 1006
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ + ++ LDRE P+ Y LT AVD+G PP T
Sbjct: 1007 SGI--------------------VRTVRRLDREAVPV-YELTAYAVDRGVPPLRT 1040
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG 48
+AP+F +Q +V EN P+G VI ++A DAD G NS++ YS+ G
Sbjct: 638 HAPIFVSTPFQVSVLENAPLGHSVIHIQAVDAD-HGENSRLEYSLTG 683
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ Y + E+ +GT V+++ A D D NS ISY + GG+ F I +G
Sbjct: 743 NRPEFTMKEYHLRLNEDAAVGTSVVSVTAVDRDA---NSAISYQITGGNTRNRFAISTQG 799
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREI 94
+ +V + K++ Y +VL DR +
Sbjct: 800 GVG---LVTLALPLDYKQERYFKLVLTASDRAL 829
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP FS+ Y A V+E+ T+V+ + A D D N + Y++ G+ G+F ID+
Sbjct: 532 NAPQFSEKRYVAQVREDVRPHTVVLRVTATDKDKDA-NGLVHYNIISGNSRGHFAIDS-- 588
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
I V+ LD E A Y L +RA D G PP
Sbjct: 589 ------------------LTGEIQVMAPLDFE-AEREYALRIRAQDAGRPP 620
Score = 37.4 bits (85), Expect = 0.024, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF Y ++ E++P+G+ V+ + A+D D G N++I+Y + D L F ID
Sbjct: 847 PVFQSAHYSVSMNEDRPVGSTVVVISASD-DDVGENARITYLLE--DNLPQFRID 898
Score = 35.8 bits (81), Expect = 0.073, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAPVF ++ VKEN +G++V + A D D G N+ I Y + G+ F +D
Sbjct: 1054 NAPVFPAEEFEVRVKENSIVGSVVAQITAVDPD-DGPNAHIMYQIVEGNIPELFQMD 1109
Score = 33.1 bits (74), Expect = 0.58, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG---GDGLGYFTIDNE 60
P F + YQ V EN+ GT V+ + A D D PG ++ YS+ L F+ID +
Sbjct: 314 PQFPQYNYQTLVPENEAAGTSVLRVVAQDPD-PGEAGRLIYSLAALMNSRSLELFSIDPQ 372
Query: 61 GPL 63
L
Sbjct: 373 SGL 375
Score = 32.3 bits (72), Expect = 0.80, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG 48
+APVF Y+ T++EN G ++ L+A D D P N+ + Y G
Sbjct: 420 HAPVFEQAQYRETLRENVEEGYPILQLRATDGDAPP-NANLRYRFVG 465
>sp|Q8QGH3|CAD20_CHICK Cadherin-20 OS=Gallus gallus GN=CDH20 PE=1 SV=1
Length = 798
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 12/126 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P F D Y A+V E P+GT VI + A DAD P G ++++ YS+ G YF++D+
Sbjct: 160 NEPKFLDGPYVASVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQ--PYFSVDS 217
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTP--PR 113
L R +D K+ IV K + ++ L N+TL V+ P P+
Sbjct: 218 RTGL--IRTALMNMDREAKEYYEVIVQAKDMGGQLGGLAGTTTVNITLSDVNDNPPRFPQ 275
Query: 114 ETYKAT 119
+ Y+ +
Sbjct: 276 KHYQMS 281
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F YQ +V E+ P+ + V + A D D G+N+++ YS+ GDGL F I+ +
Sbjct: 269 NPPRFPQKHYQMSVLESAPVSSTVGRVVAKDLDE-GINAEMKYSLVDGDGLDVFDINTD 326
Score = 32.7 bits (73), Expect = 0.70, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F+ F Y+A V EN G L+ T+ A D D P YS+
Sbjct: 489 NAPEFARF-YEAFVCENAKAGQLIQTVSAIDRDDPQEGQHFYYSL 532
>sp|Q9NYQ6|CELR1_HUMAN Cadherin EGF LAG seven-pass G-type receptor 1 OS=Homo sapiens
GN=CELSR1 PE=1 SV=1
Length = 3014
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 24/110 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF Y +V E++P+GT + TL A D D G N++I+Y + + P+
Sbjct: 787 PVFQSSHYTVSVSEDRPVGTSIATLSANDED-TGENARITYVI-------------QDPV 832
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
FRI P D GT + + LD E + Y LT+ A D G P +
Sbjct: 833 PQFRIDP---DSGT------MYTMMELDYE-NQVAYTLTIMAQDNGIPQK 872
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 55/118 (46%), Gaps = 19/118 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISY-------SVRGGDGLGY 54
N P+F +QATV EN P+G V+ ++A DAD G N+++ Y + GG G
Sbjct: 561 NEPIFVSSPFQATVLENVPLGYPVVHIQAVDAD-SGENARLHYRLVDTASTFLGGGSAG- 618
Query: 55 FTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
N P F P +I + I V LDRE Y+ + AVD G+PP
Sbjct: 619 --PKNPAPTPDF---PFQIHNSSGW----ITVCAELDREEVE-HYSFGVEAVDHGSPP 666
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
NAP+F + V+EN P+G++V ++A D D G N++I Y + GD +F +D
Sbjct: 995 NAPMFEKDELELFVEENNPVGSVVAKIRANDPD-EGPNAQIMYQIVEGDMRHFFQLD 1050
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG 49
++PVF Y+ V+EN +G V+T++A+D D P +N+ + Y V GG
Sbjct: 349 HSPVFEQSEYRERVRENLEVGYEVLTIRASDRDSP-INANLRYRVLGG 395
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N PVF+ Y+ + E+ +G+ V+TL+A D D NS I+Y + GG+ F + ++
Sbjct: 683 NDPVFTQPTYELRLNEDAAVGSSVLTLQARDRDA---NSVITYQLTGGNTRNRFALSSQ 738
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 19/103 (18%)
Query: 11 YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70
YQ + EN+P GTL++ L A G ++SY + G + +E +FR
Sbjct: 250 YQVALFENEPAGTLILQLH-AHYTIEGEEERVSYYMEG--------LFDERSRGYFR--- 297
Query: 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
ID T + V LDRE + L ++AVD TPPR
Sbjct: 298 --IDSATGAVSTDSV----LDRETKET-HVLRVKAVDYSTPPR 333
Score = 34.7 bits (78), Expect = 0.18, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN-E 60
N P FS+ Y V E+ + T V+ ++A D D G N+ I YS+ G+ G F + +
Sbjct: 455 NYPQFSEQNYVVQVPEDVGLNTAVLRVQATDRD-QGQNAAIHYSILSGNVAGQFYLHSLS 513
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G L+ V+ LD E Y+L+++A D G PP
Sbjct: 514 GILD---------------------VINPLDFEDVQ-KYSLSIKAQDGGRPP 543
Score = 33.1 bits (74), Expect = 0.50, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQ ++ E+ P T ++ + A D D G N ++ Y+ + +
Sbjct: 888 NAPQFLWDFYQGSIFEDAPPSTSILQVSATDRD-SGPNGRLLYTFQ----------GGDD 936
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
F I PT T+++ LDRE + YNL AVD+G+P
Sbjct: 937 GDGDFYIEPTSGVIRTQRR---------LDRENVAV-YNLWALAVDRGSP 976
>sp|Q9Y5H8|PCDA3_HUMAN Protocadherin alpha-3 OS=Homo sapiens GN=PCDHA3 PE=2 SV=1
Length = 950
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 25/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR---GGDGLGYFTID 58
NAP F +Y+ + EN P GTLV+T+ A D D G+N I+YS D L F +D
Sbjct: 238 NAPAFERTIYKVRLLENAPNGTLVVTVNATDLD-EGVNKDIAYSFNTDMSADILSKFHLD 296
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+N V ID K Y + + A DKG PP
Sbjct: 297 ---PVNGQISVKGNIDFEESKS------------------YEIQVEATDKGNPP 329
Score = 37.4 bits (85), Expect = 0.030, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP FS Y VKEN P G + T+ A DAD N+ +SYS+
Sbjct: 451 NAPAFSQSEYTVFVKENNPPGCHIFTVSARDADAQ-ENALVSYSL 494
Score = 34.7 bits (78), Expect = 0.18, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF V + E++ G+ A+DAD G NS ++YS+ D YFT+D +
Sbjct: 129 NAPVFPMAVKNLFISESRQPGSRFSLEGASDAD-IGTNSLLTYSL---DSTEYFTLDVK- 183
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
N I K +V+ K L+RE P Y L + A+D G P
Sbjct: 184 -RNDEEI-----------KSLGLVLKKNLNREDTPKHY-LLITAIDGGKP 220
>sp|Q5DRE9|PCDA3_PANTR Protocadherin alpha-3 OS=Pan troglodytes GN=PCDHA3 PE=3 SV=1
Length = 950
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 25/114 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR---GGDGLGYFTID 58
NAP F +Y+ + EN P GTLV+T+ A D D G+N I+YS D L F +D
Sbjct: 238 NAPAFERTIYKVRLLENAPNGTLVVTVNATDLD-EGVNKDIAYSFNTDMSADILSKFHLD 296
Query: 59 NEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P+N V ID K Y + + A DKG PP
Sbjct: 297 ---PVNGQISVKGNIDFEESKS------------------YEIQVEATDKGNPP 329
Score = 38.5 bits (88), Expect = 0.014, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 29/117 (24%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGL--GYFT 56
NAP FS Y VKEN P G + T+ A DAD N+ +SYS+ R GD Y +
Sbjct: 451 NAPAFSQSEYTVFVKENNPPGCHIFTVSARDADAQ-ENALVSYSLVERRVGDRALSSYVS 509
Query: 57 IDNEG-------PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE--IAPLGYNLTLR 104
+ E PL+H +E ++ ++ R+ + PLG N+TL+
Sbjct: 510 VHAESGKVYALQPLDH--------------EELELLQFQVSARDAGVPPLGSNVTLQ 552
Score = 35.4 bits (80), Expect = 0.10, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF V + E++ G+ A+DAD G NS ++YS+ D YFT+D +
Sbjct: 129 NAPVFPMSVKNLFISESRQPGSRFSLEGASDAD-IGTNSLLTYSL---DSTEYFTLDVK- 183
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
N I K +V+ K L+RE P Y L + A+D G P
Sbjct: 184 -RNDEEI-----------KSLGLVLKKYLNREDTPKHY-LLITAIDGGKP 220
>sp|Q86SJ6|DSG4_HUMAN Desmoglein-4 OS=Homo sapiens GN=DSG4 PE=1 SV=1
Length = 1040
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPG-MNSKISYSV 46
NAPVFS VY A+++EN TLV+ L A DAD +NSKI+Y +
Sbjct: 153 NAPVFSQSVYTASIEENSDANTLVVKLCATDADEENHLNSKIAYKI 198
>sp|P55280|CADH6_RAT Cadherin-6 OS=Rattus norvegicus GN=Cdh6 PE=2 SV=1
Length = 789
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P+F+ VY ATV E +GT V+ + A DAD P G ++K+ YS+ G YF++++
Sbjct: 155 NEPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQGQ--PYFSVES 212
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTP--PR 113
E + + +D +++ ++ K + ++ L N+TL V+ P P+
Sbjct: 213 ETGI--IKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQ 270
Query: 114 ETYK 117
TY+
Sbjct: 271 STYQ 274
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ E+ P GT + +KA+DAD G N++I YS+ G+G F + +
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDAD-VGENAEIEYSITDGEGHDMFDVITDQ 322
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
I K+ KK+ Y + V
Sbjct: 323 ETQEGIITVKKLLDFEKKRVYTLKV 347
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
NAP F++F Y+ V E L+ TL A D D P + S+S+ G + DN
Sbjct: 484 NAPEFAEF-YETFVCEKAKADQLIQTLHAVDKDDPYSGHQFSFSLAPEAASGSNFTIQDN 542
Query: 60 E 60
+
Sbjct: 543 K 543
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 24/113 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNEGP 62
PVFS Y ++E+ I T + ++ A DP + + YSV R D F ID+
Sbjct: 381 PVFSKPAYILQIREDAQINTTIGSVAA--QDPDAARNPVKYSVDRHTDMDRIFNIDSGNG 438
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+I KLLDRE L +N+T+ A + P + +
Sbjct: 439 --------------------SIFTSKLLDRETL-LWHNITVIATEINNPKQSS 470
>sp|Q5DWV1|CAD20_RAT Cadherin-20 OS=Rattus norvegicus GN=Cdh20 PE=2 SV=1
Length = 801
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 12/126 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P F D Y ATV E P+GT VI + A DAD P G ++++ YS+ G YF++D+
Sbjct: 161 NEPKFLDGPYVATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQ--PYFSVDS 218
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTP--PR 113
+ + R +D K+ I+ K + ++ L N+TL V+ P P+
Sbjct: 219 KTGI--IRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVNDNPPRFPQ 276
Query: 114 ETYKAT 119
+ Y+ +
Sbjct: 277 KHYQMS 282
Score = 36.2 bits (82), Expect = 0.055, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F YQ +V E+ P+ + V + A D D G+N+++ Y++ GDG F I+ +
Sbjct: 270 NPPRFPQKHYQMSVLESAPVSSTVGRVFAKDLDE-GINAEMKYTIVDGDGADAFDINTD 327
Score = 32.3 bits (72), Expect = 0.88, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
NAP F F Y+A + EN G L+ T+ A D D P YS+ + + DN
Sbjct: 490 NAPEFPRF-YEAFICENAKAGQLIQTVSAVDQDDPHNGQHFYYSLAPEAANNPNFTVRDN 548
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLL 90
+ N RI+ + G +++E ++ L +L
Sbjct: 549 QD--NTARILTRR--SGFRQQEQSVFYLPIL 575
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTID 58
PVF Y V E+ IGT + + A DP N+ I YS+ RG D +F +D
Sbjct: 387 PVFEPRFYFVEVPEDVTIGTTIQIISA--KDPDMTNNSIRYSIDRGSDPGRFFYVD 440
>sp|P97326|CADH6_MOUSE Cadherin-6 OS=Mus musculus GN=Cdh6 PE=1 SV=2
Length = 790
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P+F+ VY ATV E +GT V+ + A DAD P G ++K+ YS+ G YF++++
Sbjct: 155 NEPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQGQ--PYFSVES 212
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTP--PR 113
E + + +D +++ ++ K + ++ L N+TL V+ P P+
Sbjct: 213 ETGI--IKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQ 270
Query: 114 ETYK 117
TY+
Sbjct: 271 STYQ 274
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ E+ P GT + +KA+DAD G N++I YS+ G+G F + +
Sbjct: 264 NPPRFPQSTYQFKTPESSPPGTPIGRIKASDAD-VGENAEIEYSITDGEGHEMFDVITDQ 322
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVV 86
I K+ KKK Y + V
Sbjct: 323 ETQEGIITVKKLLDFEKKKVYTLKV 347
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F++F Y+ V E L+ TL+A D D P + S+S+
Sbjct: 484 NAPEFAEF-YETFVCEKAKADQLIQTLRAVDKDDPYSGHQFSFSL 527
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 24/113 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNEGP 62
PVFS Y ++E+ I T + ++ A DP + + YSV R D F ID+
Sbjct: 381 PVFSKLAYILQIREDARINTTIGSVAA--QDPDAARNPVKYSVDRHTDMDRIFNIDSGNG 438
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+I KLLDRE L +N+T+ A + P + +
Sbjct: 439 --------------------SIFTSKLLDRETL-LWHNITVIATEINNPKQSS 470
>sp|Q9Z0M3|CAD20_MOUSE Cadherin-20 OS=Mus musculus GN=Cdh20 PE=2 SV=1
Length = 801
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 12/126 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P F D Y ATV E P+GT VI + A DAD P G ++++ YS+ G YF++D+
Sbjct: 161 NEPKFLDGPYIATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQ--PYFSVDS 218
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTP--PR 113
+ + R +D K+ I+ K + ++ L N+TL V+ P P+
Sbjct: 219 KTGV--IRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVNDNPPRFPQ 276
Query: 114 ETYKAT 119
+ Y+ +
Sbjct: 277 KHYQMS 282
Score = 37.4 bits (85), Expect = 0.031, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F YQ +V E+ PI + V + A D D G+N+++ Y++ GDG F I+ +
Sbjct: 270 NPPRFPQKHYQMSVLESAPISSTVGRVFAKDLD-EGINAEMKYTIVDGDGADAFDINTD 327
Score = 32.7 bits (73), Expect = 0.73, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
NAP F F Y+A + EN G L+ T+ A D D P YS+ + + DN
Sbjct: 490 NAPEFPRF-YEAFICENAKAGQLIQTVSAVDQDDPHNGQHFYYSLAPEAANNPNFTVRDN 548
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLL 90
+ N RI+ + G +++E ++ L +L
Sbjct: 549 QD--NTARILTRR--SGFRQQEQSVFYLPIL 575
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTID 58
PVF Y V E+ IGT + + A DP N+ I YS+ RG D +F +D
Sbjct: 387 PVFEPGFYFVEVPEDVTIGTTIQIISA--KDPDVTNNSIRYSIDRGSDPGRFFYVD 440
>sp|Q9HBT6|CAD20_HUMAN Cadherin-20 OS=Homo sapiens GN=CDH20 PE=2 SV=2
Length = 801
Score = 45.8 bits (107), Expect = 7e-05, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 12/126 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P F D Y ATV E P+GT VI + A DAD P G ++++ YS+ G YF++D+
Sbjct: 161 NEPKFLDGPYVATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQ--PYFSVDS 218
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTP--PR 113
+ + R +D K+ I+ K + ++ L N+TL V+ P P+
Sbjct: 219 KTGV--IRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVNDNPPRFPQ 276
Query: 114 ETYKAT 119
+ Y+ +
Sbjct: 277 KHYQMS 282
Score = 36.2 bits (82), Expect = 0.055, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F YQ +V E+ PI + V + A D D G+N+++ Y++ GDG F I +
Sbjct: 270 NPPRFPQKHYQMSVLESAPISSTVGRVFAKDLD-EGINAEMKYTIVDGDGADAFDISTD 327
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F F Y+A V EN G L+ T+ A D D P YS+
Sbjct: 490 NAPEFPRF-YEAFVCENAKAGQLIQTVSAVDQDDPRNGQHFYYSL 533
>sp|Q6V1P9|PCD23_HUMAN Protocadherin-23 OS=Homo sapiens GN=DCHS2 PE=2 SV=1
Length = 2916
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 22/109 (20%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
APVF +Y+A+VKENQ G V ++A D D G+NSK+ + + G F I++
Sbjct: 1266 APVFKQHLYEASVKENQNPGEFVTRVEALDRD-SGVNSKLQFEIMPGASFELFEINS--- 1321
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
D G +V +LDREI + + L + D G P
Sbjct: 1322 -----------DTG------EVVTTTILDREIQEV-FTLRVLVRDGGFP 1352
Score = 43.1 bits (100), Expect = 4e-04, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N+P F +YQA+V E+Q VI + A D D G+N I YS+ G+ F ID
Sbjct: 1783 NSPCFEQSIYQASVSESQLYNAHVIQVFATDLD-SGLNGLIEYSILSGNQEEAFQIDALS 1841
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
++ TK +LD E+ Y+L ++A DKG P
Sbjct: 1842 G-----VITTK---------------AILDYELTS-SYSLIVQATDKGMP 1870
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 50/108 (46%), Gaps = 20/108 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++P F D + +V+EN PIGTLV A D D +NS+I Y Y N G
Sbjct: 1051 HSPSFQDELIVISVEENVPIGTLVYVFNAKDDDGSFLNSRIQY---------YIESHNPG 1101
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
N F I P+ GT +V + LDRE P LT+ A D+
Sbjct: 1102 T-NPFLIHPSF---GT------LVTVSRLDRESIPT-VILTVTASDQA 1138
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
++P F YQ++V+E+ +GT+V+ L A D D G+N + Y + + G FTID
Sbjct: 1474 HSPSFPTLYYQSSVREDAEVGTVVLVLSAVDKD-EGLNGQTEYFLT-DEASGAFTID 1528
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 13/102 (12%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTI-DNE 60
N P FS Y VKE+ P+G+ + + A D D G +++I Y++ G+ G+F + +N
Sbjct: 2206 NPPNFSSLSYHTHVKESTPLGSHITVVSANDRD-TGSHAEIIYNIISGNEKGHFYLEENT 2264
Query: 61 G------PLNH-----FRIVPTKIDPGTKKKEYNIVVLKLLD 91
G PL++ F + D K + +V + +LD
Sbjct: 2265 GVLYLIKPLDYEKMTKFTLTVQASDAEKKHFSFAVVFVSVLD 2306
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N PVFS YQ TV E+ P+G V+TL A D + N ISY +
Sbjct: 1988 NPPVFSQDFYQVTVPESIPVGYSVLTLSATDLES---NENISYRI 2029
Score = 38.1 bits (87), Expect = 0.017, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 24/99 (24%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID-NEGPLNHFRIVPTKI 73
V E QP+ LV T+ A D D G N++++YSV D +F ID N G + I+
Sbjct: 852 VLEGQPVNMLVTTVFAKDPD-EGNNAEVTYSVSSEDSSDHFKIDANNGEIRTTTILSYDY 910
Query: 74 DPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
P Y +++ A D+G PP
Sbjct: 911 RP----------------------SYRMSVIATDQGVPP 927
Score = 36.6 bits (83), Expect = 0.050, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 11/110 (10%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGP 62
AP F+ Y ++ E+ +G+ ++T D D N+ + YS+ G+ F ++ +
Sbjct: 2091 APEFTVKSYNLSLSEDALVGSTLVTFSNIDHDWTRENTYVEYSIISGNSQNNFHVETKFF 2150
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ + K+ +V+L LDRE A + L + A D G PP
Sbjct: 2151 HSEY----------PYKQVGYLVLLHSLDRE-ASASHELVILASDSGCPP 2189
Score = 32.7 bits (73), Expect = 0.72, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P F F A VKE+ +G+LV + A D D G N K++YS+ G+ F +D L
Sbjct: 1163 PTFISFP-NAHVKEDVTVGSLVHHITAHDPDE-GRNGKVTYSILSGNENMTFMLDESSGL 1220
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN 59
N PVF+ Y ++ + GT +I + A D D G+ ++Y + G+ FTID+
Sbjct: 173 NHPVFNPSTYVTSISDETQPGTEIINVLATDQD-SGIYGTVAYELIPGNVSSLFTIDS 229
>sp|O35161|CELR1_MOUSE Cadherin EGF LAG seven-pass G-type receptor 1 OS=Mus musculus
GN=Celsr1 PE=2 SV=3
Length = 3034
Score = 45.4 bits (106), Expect = 9e-05, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 24/110 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF Y +V E++P+GT + T+ A D D G N++I+Y + E P+
Sbjct: 802 PVFQSSHYTVSVSEDRPVGTSIATISATDED-TGENARITYVL-------------EDPV 847
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
FRI P D GT I + LD E Y L + A D G P +
Sbjct: 848 PQFRIDP---DTGT------IYTMTELDYE-DQAAYTLAITAQDNGIPQK 887
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV--RGGDGLGYFTIDN 59
NAP+F +QA V EN P+G V+ ++A DAD G N+++ Y + +G ++D+
Sbjct: 576 NAPIFVSSPFQAAVLENVPLGHSVLHIQAVDAD-AGENARLQYRLVDTASTIVGGSSVDS 634
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
E P + P +I + I V LDRE Y+ + AVD G+P
Sbjct: 635 ENPASAPDF-PFQIHNSSGW----ITVCAELDREEVE-HYSFGVEAVDHGSP 680
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P+F+ VY+ + E+ +G+ V+TL+A D D NS I+Y + GG+ F + ++
Sbjct: 698 NDPMFTQPVYELRLNEDAAVGSSVLTLRARDRDA---NSVITYQLTGGNTRNRFALSSQ 753
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 23/111 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
++PVF Y+ ++EN +G V+T++A D D P N+ + Y + G G G F ID
Sbjct: 364 HSPVFEQSEYRERIRENLEVGYEVLTIRATDGDAPS-NANMRYRLLEGAG-GVFEIDARS 421
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ R V +DRE A Y L + A D+G P
Sbjct: 422 GVVRTRAV--------------------VDREEAA-EYQLLVEANDQGRNP 451
Score = 37.7 bits (86), Expect = 0.023, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 47/114 (41%), Gaps = 25/114 (21%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG---GDGLGYFTIDN 59
+P F YQ +V EN+P GT VI L+A D D G ++SY + GYF ID
Sbjct: 257 SPQFPLPSYQVSVPENEPAGTAVIELRAHDPD-EGDAGRLSYQMEALFDERSNGYFLID- 314
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
+ + LDRE + L + AVD G+P R
Sbjct: 315 -------------------AATGAVTTARSLDRETKDT-HVLKVSAVDHGSPRR 348
Score = 36.6 bits (83), Expect = 0.047, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVF + V+EN P+G++V ++A D D G N++I Y + G+ F +D
Sbjct: 1010 NPPVFEKDELELFVEENSPVGSVVARIRANDPD-EGPNAQIMYQIVEGNVPEVFQLD 1065
Score = 35.8 bits (81), Expect = 0.073, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDN-E 60
N P FS+ Y V E+ + T V+ ++A D D G N+ I YS+ G+ G F + +
Sbjct: 470 NYPQFSEKRYVVQVPEDVAVNTAVLRVQATDRD-QGQNAAIHYSIVSGNLKGQFYLHSLS 528
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G L+ V+ LD E A Y L ++A D G PP
Sbjct: 529 GSLD---------------------VINPLDFE-AIREYTLRIKAQDGGRPP 558
Score = 35.0 bits (79), Expect = 0.12, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 21/110 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F YQ +V E+ P T V+ + A D D G N ++ Y+ + +
Sbjct: 903 NAPRFLRDFYQGSVFEDAPPSTSVLQVSATDRD-SGPNGRLLYTFQ----------GGDD 951
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
F I PT T+++ LDRE + YNL AVD+G+P
Sbjct: 952 GDGDFYIEPTSGVIRTQRR---------LDRENVAV-YNLWALAVDRGSP 991
>sp|Q5DRF0|PCDA2_PANTR Protocadherin alpha-2 OS=Pan troglodytes GN=PCDHA2 PE=3 SV=1
Length = 948
Score = 45.4 bits (106), Expect = 9e-05, Method: Composition-based stats.
Identities = 43/110 (39%), Positives = 54/110 (49%), Gaps = 19/110 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ VY+ + EN GTLV+ L A+DAD G NS+I YS+ G D TI +
Sbjct: 238 NEPTFAQSVYKVKLLENTANGTLVVKLNASDAD-EGSNSEIVYSL-GSDVSS--TIQTK- 292
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
F I P + TK K LD E A Y + + A DKGTP
Sbjct: 293 ----FTIDPISGEIRTKGK---------LDYEEAK-SYEIQVTATDKGTP 328
Score = 35.8 bits (81), Expect = 0.081, Method: Composition-based stats.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 29/117 (24%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV---RGGDGL--GYFT 56
NAP F+ Y VKEN P G + T+ A DAD N+ +SYS+ R G+ Y +
Sbjct: 451 NAPAFAQPEYTVFVKENNPPGCHIFTVSAWDADAQ-ENALVSYSLVERRVGERALSSYVS 509
Query: 57 IDNEG-------PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDRE--IAPLGYNLTLR 104
+ E PL+H +E ++ ++ R+ + PLG N+TL+
Sbjct: 510 VHAESGKVYALQPLDH--------------EEVELLQFQVTARDAGVPPLGSNVTLQ 552
>sp|Q9Y5G9|PCDG4_HUMAN Protocadherin gamma-A4 OS=Homo sapiens GN=PCDHGA4 PE=2 SV=1
Length = 931
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR 47
NAPVF+ Y +V+EN P+GT ++T+KA D D G N ++YS R
Sbjct: 238 NAPVFTQPEYHVSVRENVPVGTRLLTVKATDPD-EGANGDVTYSFR 282
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 22/114 (19%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP + ++V+E+ GT++ D+D GG+GL +I +
Sbjct: 343 NAPEVTVTSLTSSVQESSSPGTVIALFNVHDSD------------SGGNGLVTCSIPDNL 390
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
P + T Y ++ + LDRE YN+T+ A D+GTPP T
Sbjct: 391 PFTLEK---------TYGNYYRLLTHRTLDREEVS-EYNITVTATDQGTPPLST 434
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
N P F Y A + EN P G ++++ A D D G N++I+YS+
Sbjct: 448 NPPTFPHASYSAYIPENNPRGASILSMTAQDPD-SGDNARITYSL 491
>sp|Q5DRC4|PCDB9_PANTR Protocadherin beta-9 OS=Pan troglodytes GN=PCDHB9 PE=3 SV=1
Length = 797
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 20/108 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP F+ +Y+ EN P+G+ ++ + A DAD G+N+++SYS F +E
Sbjct: 238 NAPQFAQALYETQAPENSPVGSRIVKVSAGDAD-SGVNAEVSYS---------FFDASED 287
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
L F+I P+ + I + +LLD E+ Y ++A+D G
Sbjct: 288 ILTTFQINPSSGE---------IFLRELLDYELVN-SYKRNIQAMDGG 325
>sp|Q9Y5H9|PCDA2_HUMAN Protocadherin alpha-2 OS=Homo sapiens GN=PCDHA2 PE=1 SV=1
Length = 948
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 43/110 (39%), Positives = 54/110 (49%), Gaps = 19/110 (17%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F+ VY+ + EN GTLV+ L A+DAD G NS+I YS+ G D TI +
Sbjct: 238 NEPTFAQSVYKVKLLENTANGTLVVKLNASDAD-EGPNSEIVYSL-GSDVSS--TIQTK- 292
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
F I P + TK K LD E A Y + + A DKGTP
Sbjct: 293 ----FTIDPISGEIRTKGK---------LDYEEAK-SYEIQVTATDKGTP 328
Score = 35.4 bits (80), Expect = 0.10, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
NAP F+ Y VKEN P G + T+ A DAD N+ +SYS+
Sbjct: 451 NAPAFAQPEYTVFVKENNPPGCHIFTVSAWDADAQ-ENALVSYSL 494
>sp|Q9H159|CAD19_HUMAN Cadherin-19 OS=Homo sapiens GN=CDH19 PE=2 SV=1
Length = 772
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
N P F D Y+A V E P GTLVI + A+DAD P G N+++ YS+ G YF+++
Sbjct: 144 NEPKFLDEPYEAIVPEMSPEGTLVIQVTASDADDPSSGNNARLLYSLLQGQ--PYFSVE 200
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P+F + +Y+ TV E+ P GT + T+ A D D G N+++ YS+ D + I N
Sbjct: 252 NKPIFKESLYRLTVSESAPTGTSIGTIMAYDND-IGENAEMDYSIEEDDSQTFDIITNHE 310
Query: 62 PLNHFRIVPTKID 74
I+ K+D
Sbjct: 311 TQEGIVILKKKVD 323
>sp|Q8N6Y1|PCD20_HUMAN Protocadherin-20 OS=Homo sapiens GN=PCDH20 PE=2 SV=1
Length = 924
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 23/114 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F + + T++EN + L A DAD ++SY + G D YF++D+
Sbjct: 504 NAPIFLQPLIELTIEENNSPNAFLTKLYATDADSEE-RGQVSYFL-GPDAPSYFSLDS-- 559
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ V T++D K+K Y T+RAVD G PPRE+
Sbjct: 560 -VTGILTVSTQLDREEKEK------------------YRYTVRAVDCGKPPRES 594
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYS 45
N P+F+D TV N +GT + ++A D D G N++I+YS
Sbjct: 289 NCPLFTDSQINVTVYGNATVGTPIAAVQAVDKD-LGTNAQITYS 331
>sp|Q90762|CADH6_CHICK Cadherin-6 OS=Gallus gallus GN=CDH6 PE=2 SV=1
Length = 790
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDN 59
N P+F+ VY A++ E +GT V+ + A DAD P G ++K+ YS+ G YF++++
Sbjct: 155 NEPMFTKDVYNASIPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQ--PYFSVES 212
Query: 60 EGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLG----YNLTLRAVDKGTP--PR 113
E + + +D +++ ++ K + ++ L N+TL V+ P P+
Sbjct: 213 ETGI--IKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQ 270
Query: 114 ETYK 117
TY+
Sbjct: 271 STYQ 274
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 46/115 (40%), Gaps = 18/115 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N P F YQ E+ P + + +KA DAD N++I YS+ GDG F I +
Sbjct: 264 NPPRFPQSTYQFRAPESTPPDSPIGRIKANDAD-VDENAEIEYSITEGDGYDMFGITTD- 321
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETY 116
+E I V K LD E L Y L + A + PR Y
Sbjct: 322 ---------------KDTQEGIITVKKALDFENKNL-YILKVEATNTHVDPRFLY 360
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 48/113 (42%), Gaps = 24/113 (21%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV-RGGDGLGYFTIDNEGP 62
PVFS Y VKE+ PI +++ T+ A DP + + YSV R D F I N G
Sbjct: 381 PVFSRPAYIIEVKEDVPINSVIGTVTA--QDPDAAKNPVKYSVDRHTDMDRVFNI-NSG- 436
Query: 63 LNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+I K LDRE L +N+T+ A + P + +
Sbjct: 437 ------------------NGSIFTSKTLDRETL-LWHNITVIAAEINNPKQSS 470
>sp|Q9HCU4|CELR2_HUMAN Cadherin EGF LAG seven-pass G-type receptor 2 OS=Homo sapiens
GN=CELSR2 PE=1 SV=1
Length = 2923
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAP+F +QATV E+ P+G LV+ ++A DAD G N+++ Y + G FTI+N
Sbjct: 501 NAPIFVSTPFQATVLESVPLGYLVLHVQAIDAD-AGDNARLEYRLAGVGHDFPFTINN-- 557
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
GT I V LDRE Y+ + A D GTP
Sbjct: 558 --------------GTGW----ISVAAELDREEVDF-YSFGVEARDHGTP 588
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 24/112 (21%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE- 60
NAP FS+ Y V+E+ G V+ + A+D D G N+ + YS+ G+ G F +D +
Sbjct: 395 NAPQFSEKRYVVQVREDVTPGAPVLRVTASDRD-KGSNAVVHYSIMSGNARGQFYLDAQT 453
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
G L+ V + +D T K+ Y L +RA D G PP
Sbjct: 454 GALD----VVSPLDYETTKE------------------YTLRVRAQDGGRPP 483
Score = 38.5 bits (88), Expect = 0.012, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSV 46
AP F YQATV ENQP GT V +L+A D D G ++ Y++
Sbjct: 178 APQFQPPSYQATVPENQPAGTPVASLRAIDPD-EGEAGRLEYTM 220
Score = 36.2 bits (82), Expect = 0.055, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
PVF Y V E++P GT V+ + A D D G N++I+Y + D + F ID
Sbjct: 710 PVFQSSHYTVNVNEDRPAGTTVVLISATDED-TGENARITYFME--DSIPQFRID 761
Score = 36.2 bits (82), Expect = 0.069, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 47/109 (43%), Gaps = 19/109 (17%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
PVF Y+ +++EN +G V+T++A D D P N+ I Y + G G P
Sbjct: 287 PVFEQQEYKESLRENLEVGYEVLTVRATDGDAPP-NANILYRLLEGSG--------GSPS 337
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
F I P + I +DRE Y LT+ A D+G P
Sbjct: 338 EVFEIDP---------RSGVIRTRGPVDREEVE-SYQLTVEASDQGRDP 376
Score = 35.8 bits (81), Expect = 0.075, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID 58
N PVF + V+EN PIG V + A D D G N++I Y + G+ F +D
Sbjct: 917 NPPVFEQDEFDVFVEENSPIGLAVARVTATDPD-EGTNAQIMYQIVEGNIPEVFQLD 972
Score = 33.9 bits (76), Expect = 0.29, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 23/115 (20%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR-GGDGLGYFTIDNE 60
NAP F YQ +V E+ P T V+ + A D D G+N ++ Y+ + G DG G F +++
Sbjct: 811 NAPQFLRDSYQGSVYEDVPPFTSVLQISATDRD-SGLNGRVFYTFQGGDDGDGDFIVEST 869
Query: 61 GPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRET 115
+ + L+ LDRE Y L AVDKG PP T
Sbjct: 870 SGI--------------------VRTLRRLDRENVA-QYVLRAYAVDKGMPPART 903
Score = 33.5 bits (75), Expect = 0.35, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F+ Y + E+ +GT V+T+ A D D +S I+Y + G+ F+I ++
Sbjct: 606 NNPTFTQPEYTVRLNEDAAVGTSVVTVSAVDRDA---HSVITYQITSGNTRNRFSITSQ 661
>sp|Q9Y5G2|PCDGE_HUMAN Protocadherin gamma-B2 OS=Homo sapiens GN=PCDHGB2 PE=2 SV=1
Length = 931
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 20/108 (18%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
N PVFS VY+ T++E+ P G V+ + A D D G+N++I+YS + +D +
Sbjct: 238 NPPVFSQDVYRVTLREDVPPGFFVLQVTATDRD-EGINAEITYS--------FHNVDEQ- 287
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKG 109
+ HF + K T K + LD EIA Y L++ A D G
Sbjct: 288 -VKHFFNLNEKTGEITTKDD--------LDFEIAS-SYTLSIEAKDPG 325
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 44/110 (40%), Gaps = 17/110 (15%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
NAPVF Y V EN P G + + A+D D G + ++SYS+ D
Sbjct: 448 NAPVFQQTSYMVHVAENNPPGASIAQISASDPD-LGPSGQVSYSIVASD---------LK 497
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
P V G + + D E + LTL+A D+G+P
Sbjct: 498 PREILSYVSVSAQSGV------VFAQRAFDHE-QLRAFELTLQARDQGSP 540
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 38/96 (39%), Gaps = 22/96 (22%)
Query: 17 ENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPG 76
E+ P GT++ +K D D G N ++ V G I
Sbjct: 358 EDSPPGTVIALIKTRDRDS-GENGEVYCQVLGNAKF--------------------ILKS 396
Query: 77 TKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP 112
+ K Y +V LDRE P YNLT+ A D G PP
Sbjct: 397 SSKNYYKLVTDGALDREEIP-EYNLTITATDGGKPP 431
>sp|Q9Y5F8|PCDGJ_HUMAN Protocadherin gamma-B7 OS=Homo sapiens GN=PCDHGB7 PE=2 SV=1
Length = 929
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRG 48
N PVFS VY+ +++E+ P GT ++ +KA D D G+NS+I+YS G
Sbjct: 238 NPPVFSQDVYRVSLREDVPPGTSILRVKATDQD-EGINSEITYSFFG 283
Score = 36.6 bits (83), Expect = 0.044, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 44/103 (42%), Gaps = 22/103 (21%)
Query: 15 VKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKID 74
+ E+ P G +V K D D G N ++ S+ G VP KI
Sbjct: 356 IMEDSPPGVVVALFKTRDQDS-GENGEVRCSLSRG-------------------VPFKIH 395
Query: 75 PGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYK 117
+ Y +V + LDRE P YN+T+ A D+G PP + K
Sbjct: 396 -SSSNNYYKLVTDEALDREQTP-EYNVTIAATDRGKPPLSSSK 436
Score = 34.7 bits (78), Expect = 0.18, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50
NAPVF Y V EN G + + A+D D G+N ++SYS+ D
Sbjct: 448 NAPVFGQSAYLVHVPENNQPGASIAQVSASDPD-FGLNGRVSYSLIASD 495
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 45/112 (40%), Gaps = 18/112 (16%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEG 61
+AP F + E+ +G I A D D MNS Y +
Sbjct: 129 HAPQFRKDEINLEISESVSLGMGTILESAEDPDI-SMNSLSKYQL--------------S 173
Query: 62 PLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR 113
P +F +V G K E +V+ K LDRE ++L L A+D G PPR
Sbjct: 174 PNEYFSLVEKDNPDGGKYPE--LVLQKTLDRETQS-AHHLVLTALDGGDPPR 222
>sp|Q13634|CAD18_HUMAN Cadherin-18 OS=Homo sapiens GN=CDH18 PE=2 SV=1
Length = 790
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNE 60
N P F YQ V E+ +G+ V +KA DAD G N+ ++YS+ GDG+G F+I +
Sbjct: 264 NPPRFPQKHYQLYVPESAQVGSAVGKIKANDADT-GSNADMTYSIINGDGMGIFSISTD 321
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTID 58
NAP F+D Y TV E +GT V+ + A DAD P G ++++ YS+ G YF++D
Sbjct: 155 NAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQ--PYFSVD 211
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 22/108 (20%)
Query: 4 PVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPL 63
P+FS Y V EN IGT+V T+ A DP NS + Y + + ++++
Sbjct: 381 PLFSMPSYLMEVYENAKIGTVVGTVLA--QDPDSTNSLVRYFIN-------YNVEDDRFF 431
Query: 64 NHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP 111
N ID T I K+LDRE P YN+T+ A + P
Sbjct: 432 N--------IDANTG----TIRTTKVLDREETPW-YNITVTASEIDNP 466
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.138 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,422,818
Number of Sequences: 539616
Number of extensions: 2265463
Number of successful extensions: 5212
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 266
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 3649
Number of HSP's gapped (non-prelim): 1354
length of query: 127
length of database: 191,569,459
effective HSP length: 93
effective length of query: 34
effective length of database: 141,385,171
effective search space: 4807095814
effective search space used: 4807095814
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)