Query psy1047
Match_columns 127
No_of_seqs 127 out of 1374
Neff 8.3
Searched_HMMs 29240
Date Fri Aug 16 19:01:28 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1047.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1047hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2yst_A Protocadherin-7; BH-PCD 99.9 8E-28 2.7E-32 158.6 9.2 103 1-125 9-113 (119)
2 2ee0_A Protocadherin-9; Ca dom 99.9 1.9E-27 6.4E-32 156.0 8.9 100 1-124 9-111 (114)
3 3qrb_A Cadherin-1; cell adhesi 99.9 3.7E-24 1.3E-28 153.5 12.5 102 1-124 103-212 (213)
4 3ppe_A Vascular endothelial ca 99.9 2.2E-23 7.6E-28 148.6 15.0 100 1-124 99-202 (203)
5 2qvi_A Cadherin-2; beta barrel 99.9 9.7E-24 3.3E-28 151.8 10.2 103 1-124 103-214 (215)
6 3mvs_A Cadherin-23, otocadheri 99.9 5E-23 1.7E-27 147.4 13.7 101 1-125 104-205 (210)
7 2a4e_A Cadherin-11; dimer, cal 99.9 7.7E-23 2.6E-27 147.2 14.0 102 1-125 102-208 (215)
8 3lnd_A CDH6 protein, cadherin 99.9 5.4E-23 1.9E-27 146.9 12.7 101 1-124 101-206 (207)
9 3k5r_A Cadherin 13; mouse, str 99.9 2.8E-23 9.5E-28 149.4 11.1 103 1-124 103-217 (218)
10 4apx_B Protocadherin-15, otoca 99.9 4.3E-23 1.5E-27 151.0 11.7 103 1-125 122-237 (242)
11 2x2u_A Proto-oncogene tyrosine 99.9 1.3E-23 4.5E-28 153.8 7.8 102 1-125 124-236 (246)
12 1zvn_A Mn-cadherin; strand dim 99.9 1.5E-22 5.2E-27 129.7 11.5 91 10-124 5-98 (99)
13 1zxk_A Cadherin-8; strand dime 99.9 1.5E-22 5.2E-27 129.4 11.1 90 11-124 5-97 (98)
14 2yqg_A Desmoglein-2, HDGC; cad 99.9 4.2E-23 1.4E-27 136.9 3.8 102 1-125 7-112 (123)
15 2a62_A Cadherin-8; extracellul 99.9 4.2E-22 1.4E-26 150.9 9.1 102 1-124 210-322 (322)
16 3k6d_A T-cadherin; cell adhesi 99.9 2.6E-21 8.9E-26 123.8 9.9 88 11-124 5-98 (99)
17 3k6f_A T-cadherin; cell adhesi 99.8 1E-20 3.5E-25 121.2 11.0 88 11-124 6-99 (100)
18 3k6i_A T-cadherin; cell adhesi 99.8 1.8E-20 6.1E-25 119.9 11.8 87 12-124 6-98 (99)
19 3ubf_A Neural-cadherin; cell a 99.8 1.4E-20 4.9E-25 141.8 12.5 100 1-124 101-206 (316)
20 2a62_A Cadherin-8; extracellul 99.8 6.1E-21 2.1E-25 144.5 10.2 102 1-125 101-207 (322)
21 2omz_B Epithelial-cadherin; le 99.8 2E-20 6.8E-25 120.9 9.9 88 12-124 10-103 (105)
22 3ubh_A Neural-cadherin; cell a 99.8 3.7E-20 1.3E-24 144.3 13.1 97 1-124 319-417 (419)
23 1l3w_A EP-cadherin, C-cadherin 99.8 1.5E-20 5E-25 150.8 10.8 103 1-125 109-219 (546)
24 3q2v_A Cadherin-1; cell adhesi 99.8 1.5E-20 5.2E-25 150.8 10.5 103 1-125 103-213 (550)
25 1ncg_A N-cadherin; cell adhesi 99.8 2.9E-20 9.8E-25 120.9 9.3 90 10-124 6-101 (110)
26 3ubf_A Neural-cadherin; cell a 99.8 1.3E-19 4.4E-24 136.6 14.1 99 1-125 209-311 (316)
27 3q2w_A Cadherin-2; cell adhesi 99.8 3E-20 1E-24 149.4 10.4 103 1-125 103-215 (559)
28 3q2v_A Cadherin-1; cell adhesi 99.8 1.3E-19 4.4E-24 145.5 14.0 101 3-126 329-434 (550)
29 3q2w_A Cadherin-2; cell adhesi 99.8 2.3E-19 7.9E-24 144.2 15.5 101 3-126 335-439 (559)
30 1q55_A EP-cadherin, C-cadherin 99.8 9.6E-20 3.3E-24 152.9 10.8 103 1-125 258-368 (880)
31 1l3w_A EP-cadherin, C-cadherin 99.8 2E-19 7E-24 144.2 10.0 101 3-126 335-439 (546)
32 3mvs_A Cadherin-23, otocadheri 99.8 1.6E-19 5.3E-24 129.2 8.4 96 1-124 3-100 (210)
33 3ubh_A Neural-cadherin; cell a 99.8 1.3E-18 4.5E-23 135.5 11.0 100 1-124 106-211 (419)
34 1q55_A EP-cadherin, C-cadherin 99.8 1E-18 3.4E-23 146.8 10.0 101 3-126 484-588 (880)
35 2qvi_A Cadherin-2; beta barrel 99.7 3.5E-17 1.2E-21 117.5 11.5 90 12-124 6-99 (215)
36 2x2u_A Proto-oncogene tyrosine 99.7 7.3E-19 2.5E-23 128.6 2.4 97 5-124 2-120 (246)
37 2a4e_A Cadherin-11; dimer, cal 99.7 6.2E-17 2.1E-21 116.3 12.1 92 10-125 5-99 (215)
38 3qrb_A Cadherin-1; cell adhesi 99.7 2.5E-16 8.7E-21 112.6 11.3 89 11-124 5-99 (213)
39 3ppe_A Vascular endothelial ca 99.7 6.8E-16 2.3E-20 109.8 11.7 89 11-125 5-96 (203)
40 3k5r_A Cadherin 13; mouse, str 99.6 9.5E-16 3.2E-20 109.9 10.0 88 11-124 6-99 (218)
41 3lnd_A CDH6 protein, cadherin 99.6 8.4E-17 2.9E-21 114.7 4.2 89 12-124 6-97 (207)
42 1wyj_A Protocadherin beta 14; 99.6 1.2E-16 4.2E-21 106.0 2.0 90 8-124 10-106 (125)
43 1wuz_A Pcdha4 protein, CNR-EC1 99.5 5.6E-15 1.9E-19 94.8 0.4 90 9-124 3-98 (103)
44 4apx_B Protocadherin-15, otoca 99.1 3.6E-10 1.2E-14 82.3 9.0 94 9-124 20-118 (242)
45 2yhg_A SDE_182CT, cellulose-bi 93.6 1.1 3.8E-05 35.0 10.9 37 85-123 400-436 (437)
46 1op4_A Neural-cadherin; beta s 93.2 0.68 2.3E-05 31.3 8.0 78 2-108 32-109 (159)
47 3pe9_A Fibronectin(III)-like m 77.1 10 0.00035 23.2 8.6 27 95-122 60-87 (98)
48 2y72_A Collagenase, collagenas 69.3 8.7 0.0003 22.4 4.3 29 92-121 55-83 (85)
49 3ead_A Na/Ca exchange protein; 65.8 23 0.0008 22.6 7.7 46 2-51 3-48 (137)
50 2yrl_A KIAA1837 protein; PKD d 64.7 8.6 0.00029 23.4 3.8 27 94-123 67-93 (102)
51 2kpn_A Bacillolysin; solution 57.4 24 0.0008 21.8 4.8 36 85-121 48-83 (103)
52 3ott_A Two-component system se 56.0 60 0.0021 26.0 8.3 30 94-124 718-747 (758)
53 3k2m_C Monobody HA4; engineere 52.0 26 0.0009 20.4 4.4 33 93-126 68-101 (101)
54 1u2c_A Dystroglycan; IG-like d 45.9 80 0.0027 22.6 6.8 44 42-108 33-79 (246)
55 3gin_A Sodium/calcium exchange 41.8 73 0.0025 21.0 8.9 89 5-104 24-112 (160)
56 2cum_A Tenascin-X; hexabrachio 36.5 56 0.0019 19.1 4.1 27 92-119 66-92 (105)
57 3pdd_A Glycoside hydrolase, fa 35.3 1E+02 0.0034 20.7 8.8 28 94-122 151-179 (190)
58 3rb5_A Na/Ca exchange protein; 33.9 1.1E+02 0.0039 22.2 6.1 45 2-50 8-52 (298)
59 2xip_A Tumour protein P73; pho 32.2 43 0.0015 23.4 3.4 28 99-127 161-188 (208)
60 2e7m_A Protein KIAA0319; PKD d 31.6 98 0.0033 19.4 5.9 26 95-124 79-104 (113)
61 3rb5_A Na/Ca exchange protein; 31.4 1.5E+02 0.0051 21.5 7.1 16 3-18 122-137 (298)
62 2wql_A Major allergen DAU C 1; 28.8 1.2E+02 0.0041 19.6 5.9 35 12-50 55-89 (154)
63 2yro_A Galectin-8; GAL-BIND le 28.7 1.2E+02 0.0042 19.6 6.9 55 2-60 6-65 (155)
64 3q01_A Cellular tumor antigen 27.6 66 0.0023 22.9 3.7 28 99-127 158-185 (233)
65 3b83_A Ten-D3; beta sheet, com 26.3 97 0.0033 17.7 4.0 25 92-117 62-86 (100)
66 4a2l_A BT_4663, two-component 26.2 2.5E+02 0.0087 22.5 10.5 29 95-124 753-781 (795)
67 2dkm_A Collagen alpha-1(XX) ch 23.2 59 0.002 18.9 2.5 21 93-114 69-89 (104)
68 1j8k_A Fibronectin; EDA, TYPEI 22.7 1.1E+02 0.0037 17.0 4.0 25 93-118 63-87 (94)
69 3e9t_A Na/Ca exchange protein; 22.5 1.4E+02 0.0047 18.1 8.4 40 6-51 7-46 (114)
70 2dmk_A Midline 2 isoform 2; mi 21.9 1E+02 0.0035 18.5 3.6 19 93-112 88-106 (127)
71 2c4x_A Endoglucanase, ctcel9D- 21.9 1.1E+02 0.0037 21.9 4.0 31 91-124 64-94 (260)
72 1jh4_B PAIP1, polyadenylate-bi 21.5 26 0.00088 16.1 0.4 11 2-12 9-19 (26)
73 3tes_A Tencon; fibronectin typ 20.6 1.3E+02 0.0045 17.1 4.1 23 93-116 63-85 (98)
74 2yrz_A Integrin beta-4; GP150, 20.4 1.4E+02 0.0047 17.2 5.5 24 93-117 81-104 (118)
75 3qht_C Monobody YSMB-1; fibron 20.2 96 0.0033 17.6 3.0 29 93-122 66-94 (97)
76 3us9_A Sodium/calcium exchange 20.1 2.5E+02 0.0087 20.3 9.9 45 1-49 138-182 (295)
No 1
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.95 E-value=8e-28 Score=158.62 Aligned_cols=103 Identities=31% Similarity=0.440 Sum_probs=96.6
Q ss_pred CCCCeeeCCeeEEEEeCCCCCCeEEEEEEEEeCCCCCCCCcEEEEEEeCCC--CCcEEEeCCCCeEEEeeeccccCCCCC
Q psy1047 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG--LGYFTIDNEGPLNHFRIVPTKIDPGTK 78 (127)
Q Consensus 1 ~N~P~F~~~~y~~~v~E~~~~g~~v~~~~a~D~D~~g~n~~i~y~i~~~~~--~~~F~i~~~tg~i~~~~~~~~~~~~~~ 78 (127)
||+|+|.+..|.+.|+|+.++|+.|+++.|+|+|. |.|+.|+|+|..+.. ..+|.|++.+|.|
T Consensus 9 Dn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~-g~n~~i~Y~i~~~~~~~~~~F~Id~~tG~I-------------- 73 (119)
T 2yst_A 9 DNSPRFEKSVYEADLAENSAPGTPILQLRAADLDV-GVNGQIEYVFGAATESVRRLLRLDETSGWL-------------- 73 (119)
T ss_dssp CCCCCCSSSEEEEEEETTCCTTCEEEECCCCCSSS-SCCSCCCCEECSCCTTHHHHEEECTTTCEE--------------
T ss_pred CCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCC-CCCCeEEEEEecCCCccccEEEEeCCceEE--------------
Confidence 69999999999999999999999999999999999 999999999986543 4699999999999
Q ss_pred CceeeEEEccCCCCCCCCCeEEEEEEEEECCCCCcceeEEEEEEeEe
Q psy1047 79 KKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPRNGLT 125 (127)
Q Consensus 79 ~~~~~l~~~~~ld~E~~~~~y~l~v~a~D~g~p~~~st~~i~i~~~~ 125 (127)
.+.++||||... .|.|.|.|+|.|.|+++++++++|+++-
T Consensus 74 ------~~~~~LD~E~~~-~y~l~V~A~D~g~p~~s~~~~v~I~V~D 113 (119)
T 2yst_A 74 ------SVLHRIDREEVN-QLRFTVMARDRGQPPKTDKATVVLNIKD 113 (119)
T ss_dssp ------EECSCCCTTTCS-EEEEEEEECCSBTTBCCEEEEEEEEEEC
T ss_pred ------EECccCCcccCC-EEEEEEEEEECCCCCcEEEEEEEEEEEe
Confidence 899999999999 9999999999999999999999999874
No 2
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.94 E-value=1.9e-27 Score=155.97 Aligned_cols=100 Identities=33% Similarity=0.409 Sum_probs=92.5
Q ss_pred CCCCeeeCCeeEEEEeCCCCCCeEEEEEEEEeCCCCCCCCcEEEEEEeC---CCCCcEEEeCCCCeEEEeeeccccCCCC
Q psy1047 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG---DGLGYFTIDNEGPLNHFRIVPTKIDPGT 77 (127)
Q Consensus 1 ~N~P~F~~~~y~~~v~E~~~~g~~v~~~~a~D~D~~g~n~~i~y~i~~~---~~~~~F~i~~~tg~i~~~~~~~~~~~~~ 77 (127)
||+|+|.+..|.+.|+|+.++|+.|+++.|+|+|. |.|++|+|+|..+ +...+|.|++.+|.|
T Consensus 9 Dn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~-g~n~~i~Y~i~~~~~~~~~~~F~Id~~tG~I------------- 74 (114)
T 2ee0_A 9 DNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADI-GSNAEIRYIFGAQVAPATKRLFALNNTTGLI------------- 74 (114)
T ss_dssp CCCCCCSCSEEEEEEETTCCTTCEEEECCCCSCSS-CCCSCCEEEECSSCCHHHHHHEEECTTTCEE-------------
T ss_pred CCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCC-CCCcEEEEEEccCCCCCccceEEEeCCeeEE-------------
Confidence 69999999999999999999999999999999999 9999999999752 346799999999999
Q ss_pred CCceeeEEEccCCCCCCCCCeEEEEEEEEECCCCCcceeEEEEEEeE
Q psy1047 78 KKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPRNGL 124 (127)
Q Consensus 78 ~~~~~~l~~~~~ld~E~~~~~y~l~v~a~D~g~p~~~st~~i~i~~~ 124 (127)
.+.++||||... .|.|+|.|+|.|.|+ ++++++|+++
T Consensus 75 -------~~~~~LD~E~~~-~y~l~V~A~D~g~~~--~~~~v~I~V~ 111 (114)
T 2ee0_A 75 -------TVQRSLDREETA-IHKVTVLASDGSSTP--ARATVTINVT 111 (114)
T ss_dssp -------EECSCCCTTTCS-EEEEEEEEESSSSSC--EEEEEEEEEE
T ss_pred -------EECccCCcccCc-EEEEEEEEEECCCCc--eEEEEEEEEE
Confidence 899999999999 999999999999987 7788888876
No 3
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=99.91 E-value=3.7e-24 Score=153.45 Aligned_cols=102 Identities=30% Similarity=0.384 Sum_probs=95.3
Q ss_pred CCCCeeeCCeeEEEEeCCCCCCeEEEEEEEEeCCCCC---CCCcEEEEEEeCC----CCCcEEEeCCCCeEEEeeecccc
Q psy1047 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPG---MNSKISYSVRGGD----GLGYFTIDNEGPLNHFRIVPTKI 73 (127)
Q Consensus 1 ~N~P~F~~~~y~~~v~E~~~~g~~v~~~~a~D~D~~g---~n~~i~y~i~~~~----~~~~F~i~~~tg~i~~~~~~~~~ 73 (127)
||+|+|.+..|.+.|+|+.++|+.|+++.|+|+|. | .|+.++|+|..++ ..++|.|++.+|.|
T Consensus 103 Dn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~-~~~~~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i--------- 172 (213)
T 3qrb_A 103 DNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADD-DVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVI--------- 172 (213)
T ss_dssp CCCCEESCSEEEEEEETTCCTTCEEEECCEECCSC-TTTSSTTCCEEEEEEEESCCSCSCSEEECTTTCEE---------
T ss_pred CCCCccCCCceEEEEECCCCCCcEEEEEEEEeCCC-CCCCcCcEEEEEEccCCCCCCcCCeEEEECCCcEE---------
Confidence 69999999999999999999999999999999998 7 8999999998755 35799999999999
Q ss_pred CCCCCCceeeEEEc-cCCCCCCCCCeEEEEEEEEECCCCCcceeEEEEEEeE
Q psy1047 74 DPGTKKKEYNIVVL-KLLDREIAPLGYNLTLRAVDKGTPPRETYKATPRNGL 124 (127)
Q Consensus 74 ~~~~~~~~~~l~~~-~~ld~E~~~~~y~l~v~a~D~g~p~~~st~~i~i~~~ 124 (127)
.+. ++||||... .|.|.|.|+|.|.|+++++++++|+++
T Consensus 173 -----------~~~~~~LD~E~~~-~y~l~V~A~D~g~~~~s~t~~v~I~V~ 212 (213)
T 3qrb_A 173 -----------SVLTSGLDRESYP-TYTLVVQAADLQGEGLSTTAKAVITVK 212 (213)
T ss_dssp -----------EECSSCCCTTTCC-EEEEEEEEETGGGTSCEEEEEEEEEEE
T ss_pred -----------EEccCCCCCccCc-eEEEEEEEEeCCCCCceEEEEEEEEEE
Confidence 776 799999999 999999999999999999999999986
No 4
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=99.91 E-value=2.2e-23 Score=148.65 Aligned_cols=100 Identities=27% Similarity=0.428 Sum_probs=93.1
Q ss_pred CCCCeeeCCeeEEEEeCCCCCCeEEEEEEEEeCCC--CCCCCcEEEEEEeCCCCCcEEEeCCCCeEEEeeeccccCCCCC
Q psy1047 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADP--PGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTK 78 (127)
Q Consensus 1 ~N~P~F~~~~y~~~v~E~~~~g~~v~~~~a~D~D~--~g~n~~i~y~i~~~~~~~~F~i~~~tg~i~~~~~~~~~~~~~~ 78 (127)
||+|+|.+..|.+.|+|+.++|+.|+++.|+|+|. .|.|+.++|+|..++ .+|.|+ .+|.|
T Consensus 99 Dn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~~--~~F~I~-~tG~i-------------- 161 (203)
T 3ppe_A 99 DNAPIFVQKIFNGSVPEMSRLGTSVTKVTAEDADDPTVAGHATVTYQIIKGN--EYFTVD-DSGVI-------------- 161 (203)
T ss_dssp CCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTSSSTTCEEEEEEEST--TTEEEC-TTSEE--------------
T ss_pred CCCCCccCCccEEEEeccCCCCcEEEEEEEEcCCCcCCCCceEEEEEEeCCC--CcEEEe-CCeEE--------------
Confidence 69999999999999999999999999999999994 278999999998765 489999 99999
Q ss_pred CceeeEEEc-cCCCCCCCCCeEEEEEEEEEC-CCCCcceeEEEEEEeE
Q psy1047 79 KKEYNIVVL-KLLDREIAPLGYNLTLRAVDK-GTPPRETYKATPRNGL 124 (127)
Q Consensus 79 ~~~~~l~~~-~~ld~E~~~~~y~l~v~a~D~-g~p~~~st~~i~i~~~ 124 (127)
.+. ++||||... .|.|.|.|+|. |.|+++++++++|+++
T Consensus 162 ------~~~~~~LD~E~~~-~y~l~V~A~D~~G~p~~s~t~~v~I~V~ 202 (203)
T 3ppe_A 162 ------FTARADLDRESQS-AYEIIVKAKDALGLTGESSTATVIIRLT 202 (203)
T ss_dssp ------EESCSCCCTTTCS-EEEEEEEEEETTCCCCSSSEEEEEEEEE
T ss_pred ------EECCcCCCcccCC-EEEEEEEEEeCCCCCCCeEEEEEEEEEE
Confidence 888 999999999 99999999998 8999999999999986
No 5
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=99.90 E-value=9.7e-24 Score=151.77 Aligned_cols=103 Identities=29% Similarity=0.360 Sum_probs=95.1
Q ss_pred CCCCeeeCCeeEEEEeCCCCCCeEEEEEEEEeCCCC-CCCCcEEEEEEeCC----CCCcEEEeCCCCeEEEeeeccccCC
Q psy1047 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPP-GMNSKISYSVRGGD----GLGYFTIDNEGPLNHFRIVPTKIDP 75 (127)
Q Consensus 1 ~N~P~F~~~~y~~~v~E~~~~g~~v~~~~a~D~D~~-g~n~~i~y~i~~~~----~~~~F~i~~~tg~i~~~~~~~~~~~ 75 (127)
||+|+|.+..|.+.|+|+.++|+.|+++.|+|+|.. |.|+.|+|+|..++ ....|.|++.+|.|
T Consensus 103 Dn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i----------- 171 (215)
T 2qvi_A 103 DNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMFTINNETGDI----------- 171 (215)
T ss_dssp CCCCBCSSSEEEEEECSSCCTTCEEEECCCBCSSCTTSTTTCCCCEEEECSSCCSSTTCEEECTTTCEE-----------
T ss_pred CCCCcccCceeEEEEeCCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCCeEEEcCCCcEE-----------
Confidence 699999999999999999999999999999999974 58999999999876 46899999999999
Q ss_pred CCCCceeeEEEc-cCCCCCCCCCeEEEEEEEEECCCC---CcceeEEEEEEeE
Q psy1047 76 GTKKKEYNIVVL-KLLDREIAPLGYNLTLRAVDKGTP---PRETYKATPRNGL 124 (127)
Q Consensus 76 ~~~~~~~~l~~~-~~ld~E~~~~~y~l~v~a~D~g~p---~~~st~~i~i~~~ 124 (127)
.+. ++||||... .|.|.|.|+|.|.| +++++++++|+++
T Consensus 172 ---------~~~~~~LD~E~~~-~y~l~V~a~D~g~~p~~~ls~t~~v~I~V~ 214 (215)
T 2qvi_A 172 ---------ITVAAGLDREKVQ-QYTLIIQATDMEGNPTYGLSNTATAVITVT 214 (215)
T ss_dssp ---------EECSCCCCTTTCS-EEEEEEECCTTTTCTTTSCCCEEEEEEEEC
T ss_pred ---------EEecCCCCcccCC-eEEEEEEEEECCCCCCCCcceEEEEEEEEE
Confidence 775 799999999 99999999999888 7999999999986
No 6
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=99.90 E-value=5e-23 Score=147.35 Aligned_cols=101 Identities=31% Similarity=0.470 Sum_probs=94.4
Q ss_pred CCCCeeeCCeeEEEEeCCCCCCeEEEEEEEEeCCCCCCCCcEEEEEEeCCCCCcEEEeCCCCeEEEeeeccccCCCCCCc
Q psy1047 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKK 80 (127)
Q Consensus 1 ~N~P~F~~~~y~~~v~E~~~~g~~v~~~~a~D~D~~g~n~~i~y~i~~~~~~~~F~i~~~tg~i~~~~~~~~~~~~~~~~ 80 (127)
+|+|+|.+..|.+.|+|+.++|+.|+++.|+|+|. |.|+.++|+|.. ...+|.|++.+|.|
T Consensus 104 Dn~P~f~~~~y~~~v~E~~~~gt~v~~v~A~D~D~-g~n~~v~Y~i~~--~~~~F~Id~~tG~i---------------- 164 (210)
T 3mvs_A 104 DNAPTFHNQPYSVRIPENTPVGTPIFIVNATDPDL-GAGGSVLYSFQP--PSPFFAIDSARGIV---------------- 164 (210)
T ss_dssp CCCCEECSCSEEEEEETTCCTTCEEEECCEECCSS-GGGGCEEEEESS--CCSSEEECTTTCEE----------------
T ss_pred CCCCcCCCceEEEEEECCCCCCCEEEEEEEEeCCC-CCCceEEEEEeC--CCCCEEEeCCcEEE----------------
Confidence 68999999999999999999999999999999999 999999999974 45799999999999
Q ss_pred eeeEEEccCCCCCCCCCeEEEEEEEEECC-CCCcceeEEEEEEeEe
Q psy1047 81 EYNIVVLKLLDREIAPLGYNLTLRAVDKG-TPPRETYKATPRNGLT 125 (127)
Q Consensus 81 ~~~l~~~~~ld~E~~~~~y~l~v~a~D~g-~p~~~st~~i~i~~~~ 125 (127)
.+.++||||... .|.|+|.|+|.| .|+++++++++|+++-
T Consensus 165 ----~~~~~LD~E~~~-~y~l~V~a~D~g~~~~~s~~~~v~I~V~D 205 (210)
T 3mvs_A 165 ----TVIQELDYEVTQ-AYQLTVNATDQDKTRPLSTLANLAIIITD 205 (210)
T ss_dssp ----EECSCCCTTTCS-EEEEEEEEEECCSSSCCEEEEEEEEEEEC
T ss_pred ----EECCcCCCcccc-eEEEEEEEEECCCCCCCEEEEEEEEEEEc
Confidence 899999999999 999999999998 6889999999999863
No 7
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=99.90 E-value=7.7e-23 Score=147.15 Aligned_cols=102 Identities=28% Similarity=0.406 Sum_probs=93.9
Q ss_pred CCCCeeeCCeeEEEEeCCCCCCeEEEEEEEEeCCC--CCCCCcEEEEEEeCCCCCcEEEeCCCCeEEEeeeccccCCCCC
Q psy1047 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADP--PGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTK 78 (127)
Q Consensus 1 ~N~P~F~~~~y~~~v~E~~~~g~~v~~~~a~D~D~--~g~n~~i~y~i~~~~~~~~F~i~~~tg~i~~~~~~~~~~~~~~ 78 (127)
||+|+|.+..|.+.|+|+.++|+.|+++.|+|+|. .|.|+.|+|+|..++ .+|.|++.+|.|
T Consensus 102 Dn~P~F~~~~y~~~v~E~~~~Gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~~--~~F~Id~~tG~I-------------- 165 (215)
T 2a4e_A 102 DNPPEFLHEIYHANVPERSNVGTSVIQVTASDADDPTYGNSAKLVYSILEGQ--PYFSVEAQTGII-------------- 165 (215)
T ss_dssp CCCCEESSSSEEEEEETTCCTTCEEEECCEECSSCTTTCSSSCCEEEEEEST--TTEEECTTTCEE--------------
T ss_pred CCCCCccCCceEEEEECCCCCCCEEEEEEEEECCCCCCCCceEEEEEEeCCC--CcEEEeCCccEE--------------
Confidence 69999999999999999999999999999999996 277899999998764 589999999999
Q ss_pred CceeeEEEc-cCCCCCCCCCeEEEEEEEEECCCC--CcceeEEEEEEeEe
Q psy1047 79 KKEYNIVVL-KLLDREIAPLGYNLTLRAVDKGTP--PRETYKATPRNGLT 125 (127)
Q Consensus 79 ~~~~~l~~~-~~ld~E~~~~~y~l~v~a~D~g~p--~~~st~~i~i~~~~ 125 (127)
.+. ++||||... .|.|.|.|+|.|.| +++++++++|+++-
T Consensus 166 ------~~~~~~LD~E~~~-~y~l~V~A~D~g~~~~~~s~~~~v~I~V~D 208 (215)
T 2a4e_A 166 ------RTALPNMDREAKE-EYHVVIQAKDMGGHMGGLSGTTKVTITLTD 208 (215)
T ss_dssp ------EECSSCCCSSSCS-EEEEEEEEETTTTCTTCCEEEEEEEEEEEC
T ss_pred ------EEcccCCCcccCC-EEEEEEEEEECCCCCCCceeEEEEEEEEEE
Confidence 888 899999999 99999999999987 68999999999874
No 8
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=99.90 E-value=5.4e-23 Score=146.88 Aligned_cols=101 Identities=32% Similarity=0.475 Sum_probs=91.5
Q ss_pred CCCCeeeCCeeEEEEeCCCCCCeEEEEEEEEeCCCC--CCCCcEEEEEEeCCCCCcEEEeCCCCeEEEeeeccccCCCCC
Q psy1047 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPP--GMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTK 78 (127)
Q Consensus 1 ~N~P~F~~~~y~~~v~E~~~~g~~v~~~~a~D~D~~--g~n~~i~y~i~~~~~~~~F~i~~~tg~i~~~~~~~~~~~~~~ 78 (127)
||+|+|.+..|.+.|+|+.++|+.|+++.|+|+|.. |.|+.++|+|..++ .+|.|++.+|.|
T Consensus 101 Dn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~~--~~F~Id~~tG~i-------------- 164 (207)
T 3lnd_A 101 DNEPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQGQ--PYFSVESETGII-------------- 164 (207)
T ss_dssp CCCCEESCSEEEEEEESSCCTTCEEEECCEECSSCTTSSSTTCCEEEEEESG--GGEEECTTTCEE--------------
T ss_pred CCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCCCcEEEEEEcCCC--CCEEEcCCCcEE--------------
Confidence 699999999999999999999999999999999962 67889999998754 599999999999
Q ss_pred CceeeEEEc-cCCCCCCCCCeEEEEEEEEECCCC--CcceeEEEEEEeE
Q psy1047 79 KKEYNIVVL-KLLDREIAPLGYNLTLRAVDKGTP--PRETYKATPRNGL 124 (127)
Q Consensus 79 ~~~~~l~~~-~~ld~E~~~~~y~l~v~a~D~g~p--~~~st~~i~i~~~ 124 (127)
.+. ++||||... .|.|.|.|+|.|.| +++++++++|+++
T Consensus 165 ------~~~~~~lD~E~~~-~y~l~V~A~D~g~~~~~~s~t~~v~I~V~ 206 (207)
T 3lnd_A 165 ------KTALLNMDRENRE-QYQVVIQAKDMGGQMGGLSGTTTVNITLT 206 (207)
T ss_dssp ------EECCSSCCC--CC-EEEEEEEEESGGGCTTCBEEEEEEEEEEE
T ss_pred ------EECcccCCcccCC-EEEEEEEEEECCCCCCCcEeEEEEEEEEe
Confidence 888 899999999 99999999999987 8999999999986
No 9
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=99.90 E-value=2.8e-23 Score=149.38 Aligned_cols=103 Identities=32% Similarity=0.376 Sum_probs=94.2
Q ss_pred CCCCeeeCCeeEEEEeCCCCCCeEEEEEEEEeCCCC-CCCCcEEEEEEeCCCC----CcEEEeCCCCeEEEeeeccccCC
Q psy1047 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPP-GMNSKISYSVRGGDGL----GYFTIDNEGPLNHFRIVPTKIDP 75 (127)
Q Consensus 1 ~N~P~F~~~~y~~~v~E~~~~g~~v~~~~a~D~D~~-g~n~~i~y~i~~~~~~----~~F~i~~~tg~i~~~~~~~~~~~ 75 (127)
||+|+|.+..|.+.|+|+.++|+.|+++.|+|+|.. |.|+.++|+|..+++. ++|.|++.+|.|
T Consensus 103 Dn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i----------- 171 (218)
T 3k5r_A 103 DNRPIFREGPYIGHVMEGSPTGTTVMRMTAFDADDPATDNALLRYNIRQQTPDKPSPNMFYIDPEKGDI----------- 171 (218)
T ss_dssp CCCCCCCSCSEEEEEETTCCTTCEEEECCCSCSSSSCGGGGCEEEEEEEEESCCSCSCSEEECTTTCEE-----------
T ss_pred CCCCcccCCceEEEEECCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCCEEEEECCccEE-----------
Confidence 699999999999999999999999999999999973 4789999999875543 689999999999
Q ss_pred CCCCceeeEEEc---cCCCCCC--CCCeEEEEEEEEECC--CCCcceeEEEEEEeE
Q psy1047 76 GTKKKEYNIVVL---KLLDREI--APLGYNLTLRAVDKG--TPPRETYKATPRNGL 124 (127)
Q Consensus 76 ~~~~~~~~l~~~---~~ld~E~--~~~~y~l~v~a~D~g--~p~~~st~~i~i~~~ 124 (127)
.+. ++||||. .. .|.|.|.|+|.| .|+++++++++|+++
T Consensus 172 ---------~~~~~~~~LD~E~~~~~-~y~l~V~a~D~gg~~p~~sst~~v~I~V~ 217 (218)
T 3k5r_A 172 ---------VTVVSPALLDRETLENP-KYELIIEAQDMAGLDVGLTGTATATIVID 217 (218)
T ss_dssp ---------EECSCGGGCCGGGCSCS-EEEEEEEEEECSSTTTTCEEEEEEEEEEE
T ss_pred ---------EEeccCCCCCccccCCC-eEEEEEEEEECCCCCCCeeEEEEEEEEEE
Confidence 665 7999999 88 999999999999 999999999999986
No 10
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.89 E-value=4.3e-23 Score=150.96 Aligned_cols=103 Identities=29% Similarity=0.299 Sum_probs=92.5
Q ss_pred CCCCeeeCCeeEEEEeCCCCCCeEEEE-----EEEEeCCCCCCCCcEEEEEEeCCCC----CcEEEeC-CCCeEEEeeec
Q psy1047 1 MNAPVFSDFVYQATVKENQPIGTLVIT-----LKAADADPPGMNSKISYSVRGGDGL----GYFTIDN-EGPLNHFRIVP 70 (127)
Q Consensus 1 ~N~P~F~~~~y~~~v~E~~~~g~~v~~-----~~a~D~D~~g~n~~i~y~i~~~~~~----~~F~i~~-~tg~i~~~~~~ 70 (127)
||+|+|.+..|.+.|+|+.++|+.|++ +.|+|+|. |.|++|+|+|..++.. ..|.|+. .+|.|
T Consensus 122 Dn~P~F~~~~y~~~v~En~~~Gt~v~~~~~~~v~A~D~D~-g~N~~v~Ysi~~~~~~~~~~~~F~Id~~~tG~i------ 194 (242)
T 4apx_B 122 DNSPTFKHESYYATVNELTPVGTTIFTGFSGDNGATDIDD-GPNGQIEYVIQYNPEDPTSNDTFEIPLMLTGNV------ 194 (242)
T ss_dssp CCCCEESSSCEEEEEETTCCTTCEEECTTTTTTSEECCSS-GGGGCEEEEEECCTTSTTHHHHEECSSTTTCCE------
T ss_pred CCCCcccceeeeeEeeeccCCCCEEEEeeecccccccCCC-CcCCceEEEEecCCCCcccccceEEcCCCceEE------
Confidence 699999999999999999999999976 77999999 9999999999876543 4699995 58999
Q ss_pred cccCCCCCCceeeEEEccCCCCCCCCCeEEEEEEEEECCCCC---cceeEEEEEEeEe
Q psy1047 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPP---RETYKATPRNGLT 125 (127)
Q Consensus 71 ~~~~~~~~~~~~~l~~~~~ld~E~~~~~y~l~v~a~D~g~p~---~~st~~i~i~~~~ 125 (127)
.+.++||||... .|.|.|.|+|+|.|+ ++++++++|||=+
T Consensus 195 --------------~~~~~LD~E~~~-~y~l~V~A~D~G~~~~~~~~~~~~vtVnVe~ 237 (242)
T 4apx_B 195 --------------VLRKRLNYEDKT-RYYVIIQANDRAQNLNERRTTTTTLTVDLEH 237 (242)
T ss_dssp --------------EECSCCCTTTCC-EEEEEEEEEECCSSGGGCCEEEEEEEEEEEC
T ss_pred --------------EECCcCChhhCC-EEEEEEEEEECCcCchhcccCCceEEEEEee
Confidence 899999999999 999999999999886 7788999998743
No 11
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=99.89 E-value=1.3e-23 Score=153.83 Aligned_cols=102 Identities=18% Similarity=0.110 Sum_probs=94.0
Q ss_pred CCCCe----------eeCCeeEEEEeCCCCCCeEEEEEEEEeCCCCCCCCcEEEEEEeCCCCCcEEEeCCCCeEEEeeec
Q psy1047 1 MNAPV----------FSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVP 70 (127)
Q Consensus 1 ~N~P~----------F~~~~y~~~v~E~~~~g~~v~~~~a~D~D~~g~n~~i~y~i~~~~~~~~F~i~~~tg~i~~~~~~ 70 (127)
||+|+ |.+..|.+.|+|+.++|+.|+++.|+|+|. |.|+.|+|+|..++ ..+|.|++.+|.|
T Consensus 124 Dn~P~~~~~~~~~~~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~-g~n~~i~Y~i~~~~-~~~F~Id~~tG~i------ 195 (246)
T 2x2u_A 124 TSFPACSSLKPRELCFPETRPSFRIRENRPPGTFHQFRLLPVQFL-CPQISVAYRLLEGE-GLPFRSAPDSLEV------ 195 (246)
T ss_dssp SCCCCGGGCCHHHHHSCSSCCCEEEEBTSCCCEEEECSCHHHHHH-CTTSCEEEEEESCT-TSSEECCTTCCEE------
T ss_pred CCCCccccccccccccCCCcEEEEEECCCCCCcEEEEEEEEcCCC-CCCcEEEEEEccCC-CCCEEEECCcCEE------
Confidence 69999 999999999999999999999999999999 99999999998754 7899999999999
Q ss_pred cccCCCCCCceeeEEEccCCCCCCCCCeEEEEEEEEE-CCCCCcceeEEEEEEeEe
Q psy1047 71 TKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVD-KGTPPRETYKATPRNGLT 125 (127)
Q Consensus 71 ~~~~~~~~~~~~~l~~~~~ld~E~~~~~y~l~v~a~D-~g~p~~~st~~i~i~~~~ 125 (127)
.+.++||||... .|.|+|.|+| .|.|+++++++++|+++-
T Consensus 196 --------------~~~~~LDrE~~~-~y~l~V~A~d~dg~p~~ss~~~v~I~V~D 236 (246)
T 2x2u_A 196 --------------STRWALDREQRE-KYELVAVCTVHAGAREEVVMVPFPVTVYD 236 (246)
T ss_dssp --------------EESSCBCTTTCS-EEEEEEEEEEC---CCEEEEEEEEEEEEC
T ss_pred --------------EeCCccCccccc-eEEEEEEEEecCCCCcceEEEEEEEEEEE
Confidence 999999999999 9999999998 667999999999999974
No 12
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.89 E-value=1.5e-22 Score=129.68 Aligned_cols=91 Identities=29% Similarity=0.239 Sum_probs=83.3
Q ss_pred eeEEEEeCCCC--CCeEEEEEEEEeCCCCCCCCcEEEEEEeCCCCCcEEEeCCCCeEEEeeeccccCCCCCCceeeEEEc
Q psy1047 10 VYQATVKENQP--IGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVL 87 (127)
Q Consensus 10 ~y~~~v~E~~~--~g~~v~~~~a~D~D~~g~n~~i~y~i~~~~~~~~F~i~~~tg~i~~~~~~~~~~~~~~~~~~~l~~~ 87 (127)
.+.+.|+||.+ .|+.|+++. +|+|. | |++|+|+|..++..+.|.|++.+|.| .+.
T Consensus 5 ~~~~~v~En~~~~~g~~v~~v~-~D~D~-g-Ng~v~Ysi~~~~~~~~F~Id~~tG~i--------------------~~~ 61 (99)
T 1zvn_A 5 WNQFFVLEEYTGTDPLYVGKLH-SDMDR-G-DGSIKYILSGEGAGIVFTIDDTTGDI--------------------HAI 61 (99)
T ss_dssp CCEEEEEGGGCSSSCEEEEECC-BTTCC-S-SSCEEEEEEETTBTTTEEECTTTCEE--------------------EEC
T ss_pred ccEEEEECCCCCCCCcEEEEEE-ECCCC-C-CCEEEEEEeCCCCCceEEEeCCCCCE--------------------EEC
Confidence 36788999976 689999999 99999 9 99999999876666789999999999 899
Q ss_pred cCCCCCCCCCeEEEEEEEEECCC-CCcceeEEEEEEeE
Q psy1047 88 KLLDREIAPLGYNLTLRAVDKGT-PPRETYKATPRNGL 124 (127)
Q Consensus 88 ~~ld~E~~~~~y~l~v~a~D~g~-p~~~st~~i~i~~~ 124 (127)
++||||... .|.|+|.|+|.|. |++++++++.|+++
T Consensus 62 ~~LDrE~~~-~y~l~V~A~D~G~~p~l~~~~~v~I~V~ 98 (99)
T 1zvn_A 62 QRLDREERS-QYTLRAQALDRRTGRPMEPESEFIIKIQ 98 (99)
T ss_dssp SCCCTTTCS-EEEEEEEEEETTTCCBSSCCEEEEEEEE
T ss_pred eecCCccCC-eEEEEEEEEECCCCCCcceeEEEEEEEe
Confidence 999999999 9999999999995 99999999999986
No 13
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.89 E-value=1.5e-22 Score=129.42 Aligned_cols=90 Identities=33% Similarity=0.302 Sum_probs=80.7
Q ss_pred eEEEEeCCCC--CCeEEEEEEEEeCCCCCCCCcEEEEEEeCCCCCcEEEeCCCCeEEEeeeccccCCCCCCceeeEEEcc
Q psy1047 11 YQATVKENQP--IGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLK 88 (127)
Q Consensus 11 y~~~v~E~~~--~g~~v~~~~a~D~D~~g~n~~i~y~i~~~~~~~~F~i~~~tg~i~~~~~~~~~~~~~~~~~~~l~~~~ 88 (127)
+.+.|+||.+ .|+.|+++. +|+|. | |++|+|+|..++..+.|.|++.+|.| .+.+
T Consensus 5 ~~~~v~En~~~p~~~~v~~v~-~D~D~-g-N~~v~Ysi~~~~~~~~F~Id~~tG~i--------------------~~~~ 61 (98)
T 1zxk_A 5 NQMFVLEEFSGPEPILVGRLH-TDLDP-G-SKKIKYILSGDGAGTIFQINDITGDI--------------------HAIK 61 (98)
T ss_dssp CEEEECGGGCSSSCEEEEECC-BCCCC-C---CEEEEEEETTBTTTEEECTTTCEE--------------------EECS
T ss_pred ceEEEECCCCCCCCeEEEEEE-ECCCC-C-CCEEEEEEeCCCCCCEEEEECCccEE--------------------EECc
Confidence 6789999985 799999997 99999 8 99999999875556789999999999 8999
Q ss_pred CCCCCCCCCeEEEEEEEEECCC-CCcceeEEEEEEeE
Q psy1047 89 LLDREIAPLGYNLTLRAVDKGT-PPRETYKATPRNGL 124 (127)
Q Consensus 89 ~ld~E~~~~~y~l~v~a~D~g~-p~~~st~~i~i~~~ 124 (127)
+||||... .|.|+|.|+|.|. |+++++++++|+++
T Consensus 62 ~LDrE~~~-~y~l~v~A~D~g~~~~l~~~~~v~I~V~ 97 (98)
T 1zxk_A 62 RLDREEKA-EYTLTAQAVDFETNKPLEPPSEFIIKVQ 97 (98)
T ss_dssp CCCTTTCS-EEEEEEEEEETTTCCBSSCCEEEEEEEC
T ss_pred cCCCcCCC-eEEEEEEEEECCCCCCcceeEEEEEEEE
Confidence 99999999 9999999999998 88999999999985
No 14
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.87 E-value=4.2e-23 Score=136.90 Aligned_cols=102 Identities=20% Similarity=0.149 Sum_probs=94.3
Q ss_pred CCCCeeeCCeeEEEEeCCCCCCeEEEEEEEEeCCCCCCCCcEEEEEEeC----CCCCcEEEeCCCCeEEEeeeccccCCC
Q psy1047 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG----DGLGYFTIDNEGPLNHFRIVPTKIDPG 76 (127)
Q Consensus 1 ~N~P~F~~~~y~~~v~E~~~~g~~v~~~~a~D~D~~g~n~~i~y~i~~~----~~~~~F~i~~~tg~i~~~~~~~~~~~~ 76 (127)
++.|.|....|.+.+.|+.++|+.|+++. +|+|. |.|+.|+|+|..+ +...+|.|++.+|.|
T Consensus 7 r~~p~f~~~~~~v~e~e~~~~gt~v~~v~-~D~D~-g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i------------ 72 (123)
T 2yqg_A 7 GQKRAWITAPVALREGEDLSKKNPIAKIH-SDLAE-ERGLKITYKYTGKGITEPPFGIFVFNKDTGEL------------ 72 (123)
T ss_dssp CSCCSSCCCCEEEESSSCCCSSCCCBCCC-CHHHH-HHTCCCEEEEEEBTTTBSSCSSEEEETTTTEE------------
T ss_pred ccCCccCCCCEEEEecCCCCCCCEEEEEE-ECCCC-CCCceEEEEEecCCCCCCcCCCEEEeCCcCEE------------
Confidence 47899999999999999999999999999 69998 8999999999875 346899999999999
Q ss_pred CCCceeeEEEccCCCCCCCCCeEEEEEEEEECCCCCcceeEEEEEEeEe
Q psy1047 77 TKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPRNGLT 125 (127)
Q Consensus 77 ~~~~~~~l~~~~~ld~E~~~~~y~l~v~a~D~g~p~~~st~~i~i~~~~ 125 (127)
.+.++||||... .|.|+|.|+|.|.|+++++++++|+++-
T Consensus 73 --------~~~~~LDrE~~~-~y~l~V~A~D~g~p~~~~~~~v~I~V~D 112 (123)
T 2yqg_A 73 --------NVTSILDREETP-FFLLTGYALDARGNNVEKPLELRIKVLD 112 (123)
T ss_dssp --------EECSCCBTTTBS-EEEEEEEEECTTCCEEEEEECCEEEEEC
T ss_pred --------EECcccCcccCc-eEEEEEEEEECCCCceEEEEEEEEEEEE
Confidence 899999999999 9999999999999999999999999873
No 15
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=99.87 E-value=4.2e-22 Score=150.88 Aligned_cols=102 Identities=29% Similarity=0.394 Sum_probs=91.0
Q ss_pred CCCCeeeCCeeEEEEeCCCCCCeEEEEEEEEeCCCCCCCCcEEEEEEeCCCCCcEEEe----CCCCeEEEeeeccccCCC
Q psy1047 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTID----NEGPLNHFRIVPTKIDPG 76 (127)
Q Consensus 1 ~N~P~F~~~~y~~~v~E~~~~g~~v~~~~a~D~D~~g~n~~i~y~i~~~~~~~~F~i~----~~tg~i~~~~~~~~~~~~ 76 (127)
+|+|+|.+..|.+.|+|+.++|+.|+++.|+|+|. |.|+.++|+|..++..++|.|+ ..+|.|
T Consensus 210 Dn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~-g~n~~i~Y~i~~g~~~~~F~I~~d~~~~tG~i------------ 276 (322)
T 2a62_A 210 DNPPKFAQSLYHFSVPEDVVLGTAIGRVKANDQDI-GENAQSSYDIIDGDGTALFEITSDAQAQDGVI------------ 276 (322)
T ss_dssp CCCCCCSCSEEEEEECSCCSSCCEEEEEECCCSSC-GGGTCCEEEEC---CCSSBCCBCCTTTSEEEE------------
T ss_pred CCCCeecCCCceeEeECCCCCCcEEEEEEEEeCCC-CCCceEEEEEECCCCCCcEEEeccCCCceEEE------------
Confidence 68999999999999999999999999999999999 9999999999888888999999 357888
Q ss_pred CCCceeeEEEccCCCCCCCCCeEEEEEEEEECCCCCc-------ceeEEEEEEeE
Q psy1047 77 TKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPR-------ETYKATPRNGL 124 (127)
Q Consensus 77 ~~~~~~~l~~~~~ld~E~~~~~y~l~v~a~D~g~p~~-------~st~~i~i~~~ 124 (127)
.+.++||||... .|.|+|.|+|.|.|++ +++++|+|+|.
T Consensus 277 --------~~~~~LD~E~~~-~y~l~V~A~D~g~pp~~~~~~~~s~~~~V~I~V~ 322 (322)
T 2a62_A 277 --------RLRKPLDFETKK-SYTLKVEAANIHIDPRFSSRGPFKDTATVKIVVE 322 (322)
T ss_dssp --------EBCSCCCCSSCC-EEEEEEEEECCCSSCTTSSCCCCCCCCEEEEEEC
T ss_pred --------EECCcCCcccCC-eEEEEEEEEECCCCCccccCCCcccEEEEEEEEC
Confidence 999999999999 9999999999998864 57888998873
No 16
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.86 E-value=2.6e-21 Score=123.79 Aligned_cols=88 Identities=25% Similarity=0.276 Sum_probs=81.1
Q ss_pred eEEEEeCCCCC--CeEEEEEEEEeCCCCCCCCcEEEEEEe----CCCCCcEEEeCCCCeEEEeeeccccCCCCCCceeeE
Q psy1047 11 YQATVKENQPI--GTLVITLKAADADPPGMNSKISYSVRG----GDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNI 84 (127)
Q Consensus 11 y~~~v~E~~~~--g~~v~~~~a~D~D~~g~n~~i~y~i~~----~~~~~~F~i~~~tg~i~~~~~~~~~~~~~~~~~~~l 84 (127)
+.+.|+||.++ |+.|+++.|+|+|. .|+|+|.+ +++.+.|.|++.+|.|
T Consensus 5 ~~~~V~En~~~~~g~~v~~v~A~D~D~-----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i-------------------- 59 (99)
T 3k6d_A 5 PSISIPENQRIPFPKIVGRVVVSDRIP-----GSKIKLYGKGVDQEPKGIFKINENSGEV-------------------- 59 (99)
T ss_dssp CCEEEETTCCSCSSEEEEECBCSSCCT-----TCEEEEESBTTTBSSTTSEEECTTTCEE--------------------
T ss_pred CcEEEeCCCCCCCCcEEEEEEEECCCC-----cEEEEEecCcCCCCCCCEEEEECCceEE--------------------
Confidence 46789999999 99999999999996 69999974 3456899999999999
Q ss_pred EEccCCCCCCCCCeEEEEEEEEECCCCCcceeEEEEEEeE
Q psy1047 85 VVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPRNGL 124 (127)
Q Consensus 85 ~~~~~ld~E~~~~~y~l~v~a~D~g~p~~~st~~i~i~~~ 124 (127)
.+.++||||... .|.|.|.|+|.|.|+++++++++|+++
T Consensus 60 ~~~~~LDrE~~~-~y~l~V~A~D~g~~~l~~~~~v~I~V~ 98 (99)
T 3k6d_A 60 SVTKALDREAIP-SYQLQVETTDENGKTIEGPVDLEILVI 98 (99)
T ss_dssp EECSCCCTTTCC-EEEEEEEEECTTCCEEEEEEEEEEEEE
T ss_pred EECcCCCcccCc-eEEEEEEEEECCCCceeeEEEEEEEEE
Confidence 999999999999 999999999999999999999999986
No 17
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.85 E-value=1e-20 Score=121.20 Aligned_cols=88 Identities=22% Similarity=0.183 Sum_probs=80.2
Q ss_pred eEEEEeCCCCC--CeEEEEEEEEeCCCCCCCCcEEEEEEe----CCCCCcEEEeCCCCeEEEeeeccccCCCCCCceeeE
Q psy1047 11 YQATVKENQPI--GTLVITLKAADADPPGMNSKISYSVRG----GDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNI 84 (127)
Q Consensus 11 y~~~v~E~~~~--g~~v~~~~a~D~D~~g~n~~i~y~i~~----~~~~~~F~i~~~tg~i~~~~~~~~~~~~~~~~~~~l 84 (127)
..+.|+||.+. |+.|+++.|+|+|. .|+|+|.+ +++.+.|.|++.+|.|
T Consensus 6 ~~~~V~EN~~~~~g~~v~~V~A~D~D~-----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i-------------------- 60 (100)
T 3k6f_A 6 SPILIPENQRQPFPRDVGKVVDSDRPE-----GSKFRLTGKGVDQDPKGTFRINENTGSV-------------------- 60 (100)
T ss_dssp CCEEEETTCCSSSCEEEEECEETTCCT-----TCEEEEEEBTTTBSSTTSEEECTTTCEE--------------------
T ss_pred CcEEEeCCCCCCCCcEEEEEEEEcCCC-----CEEEEEeCCCCCCCcCCEEEEECCCCEE--------------------
Confidence 35789999998 89999999999996 58999975 2356899999999999
Q ss_pred EEccCCCCCCCCCeEEEEEEEEECCCCCcceeEEEEEEeE
Q psy1047 85 VVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPRNGL 124 (127)
Q Consensus 85 ~~~~~ld~E~~~~~y~l~v~a~D~g~p~~~st~~i~i~~~ 124 (127)
.+.++||||... .|.|+|.|+|.|.|+++++++++|+++
T Consensus 61 ~~~~~LDrE~~~-~y~l~V~A~D~g~p~l~~~~~v~I~V~ 99 (100)
T 3k6f_A 61 SVTRTLDRETIA-TYQLYVETTDASGKTLEGPVPLEVIVI 99 (100)
T ss_dssp EECSCCCTTTCS-EEEEEEEEECTTCCEEEEEEEEEEEEE
T ss_pred EECcccCCcCCC-EEEEEEEEEECCCCcccceEEEEEEEE
Confidence 999999999999 999999999999999999999999986
No 18
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.85 E-value=1.8e-20 Score=119.86 Aligned_cols=87 Identities=20% Similarity=0.181 Sum_probs=79.4
Q ss_pred EEEEeCCCCCC--eEEEEEEEEeCCCCCCCCcEEEEEEe----CCCCCcEEEeCCCCeEEEeeeccccCCCCCCceeeEE
Q psy1047 12 QATVKENQPIG--TLVITLKAADADPPGMNSKISYSVRG----GDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIV 85 (127)
Q Consensus 12 ~~~v~E~~~~g--~~v~~~~a~D~D~~g~n~~i~y~i~~----~~~~~~F~i~~~tg~i~~~~~~~~~~~~~~~~~~~l~ 85 (127)
.+.|+||.+.| ..|+++.|+|+|. +|+|+|.+ +++.+.|.|++.+|.| .
T Consensus 6 ~~~v~EN~~~g~~~~v~~V~A~D~D~-----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i--------------------~ 60 (99)
T 3k6i_A 6 PILIPENQRPPFPRSVGKVIRSEGTE-----GAKFRLSGKGVDQDPKGIFRINEISGDV--------------------S 60 (99)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCS-----SEEEEEESBTTTBSSTTSEEECTTTCEE--------------------E
T ss_pred cEEEeCCCCCCCCeEEEEEEEEcCCC-----eEEEEEeCCCCCCCcCCEEEEECCCcEE--------------------E
Confidence 46899999986 8999999999996 79999975 2345899999999999 9
Q ss_pred EccCCCCCCCCCeEEEEEEEEECCCCCcceeEEEEEEeE
Q psy1047 86 VLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPRNGL 124 (127)
Q Consensus 86 ~~~~ld~E~~~~~y~l~v~a~D~g~p~~~st~~i~i~~~ 124 (127)
+.++||||... .|.|.|.|+|.|.|++++++++.|+++
T Consensus 61 ~~~~LDrE~~~-~y~l~v~A~D~g~~~l~~~~~v~I~V~ 98 (99)
T 3k6i_A 61 VTRPLDREAIA-NYELEVEVTDLSGKIIDGPVRLDISVI 98 (99)
T ss_dssp ECSCCCTTTCC-EEEEEEEEEETTSCEEEEEEEEEEEEE
T ss_pred ECcccCCccCC-EEEEEEEEEECCCCceeeeEEEEEEEE
Confidence 99999999999 999999999999999999999999986
No 19
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=99.84 E-value=1.4e-20 Score=141.81 Aligned_cols=100 Identities=24% Similarity=0.216 Sum_probs=90.0
Q ss_pred CCCCeeeCCe--eEEEEeCCCCCCeEEEEEEEEeCCCCCCCCcEEEEEEeCCCCCcEEEeCCCCeEEEeeeccccCCCCC
Q psy1047 1 MNAPVFSDFV--YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTK 78 (127)
Q Consensus 1 ~N~P~F~~~~--y~~~v~E~~~~g~~v~~~~a~D~D~~g~n~~i~y~i~~~~~~~~F~i~~~tg~i~~~~~~~~~~~~~~ 78 (127)
||+|+|.+.. |.+.|+|+.++|+.|+++.|+|+|. |.| ++|+|..++..++|.|++.+|.|
T Consensus 101 Dn~P~F~~~~~~y~~~v~En~~~gt~v~~v~A~D~D~-g~n--i~Y~i~~~~~~~~F~Id~~tG~i-------------- 163 (316)
T 3ubf_A 101 DEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDT-DHN--IHYFIVRDRTGGRFEVDERSGVV-------------- 163 (316)
T ss_dssp CCCCEECCSSSSEEEEECTTCCTTCEEEECCEECSST-TCC--EEEEEEEEESSSCEEECTTTCEE--------------
T ss_pred CCCCccCCCCCCEEEEEeCCCCCCCEEEEEEEECCCC-CCc--eEEEEEeCCCCCEEEEECCccEE--------------
Confidence 6999999887 8999999999999999999999998 766 99999877788899999999999
Q ss_pred CceeeEEEccCCCCCCCCCeEEEEEEEEECCC----CCcceeEEEEEEeE
Q psy1047 79 KKEYNIVVLKLLDREIAPLGYNLTLRAVDKGT----PPRETYKATPRNGL 124 (127)
Q Consensus 79 ~~~~~l~~~~~ld~E~~~~~y~l~v~a~D~g~----p~~~st~~i~i~~~ 124 (127)
.+.++||||... .|.|.|.|+|.|. |+++++++++|+++
T Consensus 164 ------~~~~~lD~e~~~-~y~l~V~A~D~g~~~~~~~~~~~~~v~I~V~ 206 (316)
T 3ubf_A 164 ------RTRGTDLFQLDM-EYVLYVKAEDQNGKVDDRRFQSTPEERLSIV 206 (316)
T ss_dssp ------EECSSCCCCTTC-EEEEEEEEEESCC-------CBCCCEEEEEE
T ss_pred ------EECCcCCcccCc-EEEEEEEEEeCCCCCCCccccceEEEEEEEE
Confidence 999999999999 9999999999984 57888888888876
No 20
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=99.84 E-value=6.1e-21 Score=144.51 Aligned_cols=102 Identities=31% Similarity=0.383 Sum_probs=93.4
Q ss_pred CCCCeeeCCeeEEEEeCCCCCCeEEEEEEEEeCCC--CCCCCcEEEEEEeCCCCCcEEEeCCCCeEEEeeeccccCCCCC
Q psy1047 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADP--PGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTK 78 (127)
Q Consensus 1 ~N~P~F~~~~y~~~v~E~~~~g~~v~~~~a~D~D~--~g~n~~i~y~i~~~~~~~~F~i~~~tg~i~~~~~~~~~~~~~~ 78 (127)
||+|+|.+..|.+.|+|+.++|+.|+++.|+|+|. .|.|+.++|+|..++ .+|.|++.+|.|
T Consensus 101 Dn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~~--~~F~Id~~tG~i-------------- 164 (322)
T 2a62_A 101 DNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEGQ--PYFSIEPETAII-------------- 164 (322)
T ss_dssp CSCBCCSSSEEEEEECSSCCTTCBCCCCCCCBCSCSSSTTSSCEEEEEEECT--TTEEECTTTCCE--------------
T ss_pred CCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCccEEEEEEEccCC--CCEEEecCCCEE--------------
Confidence 69999999999999999999999999999999995 277899999998754 689999999999
Q ss_pred CceeeEEEc-cCCCCCCCCCeEEEEEEEEECCCCC--cceeEEEEEEeEe
Q psy1047 79 KKEYNIVVL-KLLDREIAPLGYNLTLRAVDKGTPP--RETYKATPRNGLT 125 (127)
Q Consensus 79 ~~~~~l~~~-~~ld~E~~~~~y~l~v~a~D~g~p~--~~st~~i~i~~~~ 125 (127)
.+. +.||||... .|.|+|.|+|.|.|+ ++++++++|+++-
T Consensus 165 ------~~~~~~LD~E~~~-~y~l~V~a~D~g~p~~~~s~~~~v~I~V~D 207 (322)
T 2a62_A 165 ------KTALPNMDREAKE-EYLVVIQAKDMGGHSGGLSGTTTLTVTLTD 207 (322)
T ss_dssp ------EECSSCCCGGGCS-EEEEEEEEEESCSSSSCCBCCEEEEEEECC
T ss_pred ------EecccCCCcccCC-eEEEEEEEEECCCCCCCceeEEEEEEEEEe
Confidence 777 899999999 999999999999885 8999999999863
No 21
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.84 E-value=2e-20 Score=120.87 Aligned_cols=88 Identities=24% Similarity=0.277 Sum_probs=78.8
Q ss_pred EEEEeCCCC--CCeEEEEEEEEeCCCCCCCCcEEEEEEeCCC----CCcEEEeCCCCeEEEeeeccccCCCCCCceeeEE
Q psy1047 12 QATVKENQP--IGTLVITLKAADADPPGMNSKISYSVRGGDG----LGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIV 85 (127)
Q Consensus 12 ~~~v~E~~~--~g~~v~~~~a~D~D~~g~n~~i~y~i~~~~~----~~~F~i~~~tg~i~~~~~~~~~~~~~~~~~~~l~ 85 (127)
.+.|+||.+ .|..|+++.| |. |.|++|+|+|..++. .+.|.|++.+|.| .
T Consensus 10 ~~~V~En~~~~~~~~v~~v~A---d~-g~N~~i~Ysi~~~~~~~~~~~~F~Id~~tG~I--------------------~ 65 (105)
T 2omz_B 10 PISCPENEKGPFPKNLVQIKS---NK-DKEGKVFYSITGQGADTPPVGVFIIERETGWL--------------------K 65 (105)
T ss_dssp CCCEESSCCSSSSEEEEECEE---GG-GGSSCCEEEEEEBTTTBSSTTSEEECTTTCEE--------------------E
T ss_pred CEEEeCCCCCCCCcEEEEEEC---CC-CCCCeEEEEEeCCCCCCCccCEEEEeCCCCEE--------------------E
Confidence 468999998 5889999998 44 668999999987543 4689999999999 9
Q ss_pred EccCCCCCCCCCeEEEEEEEEECCCCCcceeEEEEEEeE
Q psy1047 86 VLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPRNGL 124 (127)
Q Consensus 86 ~~~~ld~E~~~~~y~l~v~a~D~g~p~~~st~~i~i~~~ 124 (127)
+.++||||... .|.|+|.|+|.|.|+++++++++|+++
T Consensus 66 ~~~~LDrE~~~-~y~l~V~A~D~g~p~~~~~~~v~I~V~ 103 (105)
T 2omz_B 66 VTEPLDRERIA-TYTLFSHAVSSNGNAVEDPMEILITVT 103 (105)
T ss_dssp ECSCCCTTTCC-EEEEEEEEECTTSCBSSCCEEEEEEEE
T ss_pred ECccCCcCCCC-eEEEEEEEEECCCCceeeEEEEEEEEE
Confidence 99999999999 999999999999999999999999986
No 22
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=99.84 E-value=3.7e-20 Score=144.28 Aligned_cols=97 Identities=35% Similarity=0.496 Sum_probs=90.1
Q ss_pred CCCCeeeCCeeEE-EEeCCCCCCeEEEEEEEEeCCCCCCCCcEEEEEEeCCCCCcEEEeCCCCeEEEeeeccccCCCCCC
Q psy1047 1 MNAPVFSDFVYQA-TVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKK 79 (127)
Q Consensus 1 ~N~P~F~~~~y~~-~v~E~~~~g~~v~~~~a~D~D~~g~n~~i~y~i~~~~~~~~F~i~~~tg~i~~~~~~~~~~~~~~~ 79 (127)
||+|+|....|.+ .|+|+.++|+.|+++.|+|+|. |.|+.++|+|.. ++|.|++ +|.|
T Consensus 319 Dn~P~f~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~-g~n~~v~Y~i~~----~~F~Id~-~G~i--------------- 377 (419)
T 3ubh_A 319 DNAPKFELPDYQAHNVDEDIPLGTSILRVKAMDSDS-GSNAEIEYLVSD----DHFAVDS-NGII--------------- 377 (419)
T ss_dssp CCCCEESSSEEEEEEEETTCCTTCEEEECCEECSSC-GGGGCEEEEESC----TTEEECT-TCEE---------------
T ss_pred CCCCcccCCcceeEEecCCCCCCCEEEEEEEEeCCC-CCCCEEEEEEcC----CcEEECC-CeEE---------------
Confidence 6999999999987 7999999999999999999999 999999999963 3799998 8999
Q ss_pred ceeeEEEccCCCCCC-CCCeEEEEEEEEECCCCCcceeEEEEEEeE
Q psy1047 80 KEYNIVVLKLLDREI-APLGYNLTLRAVDKGTPPRETYKATPRNGL 124 (127)
Q Consensus 80 ~~~~l~~~~~ld~E~-~~~~y~l~v~a~D~g~p~~~st~~i~i~~~ 124 (127)
.+.+.||||. .. .|.|+|.|+|.|.|+++++++|+|.+-
T Consensus 378 -----~~~~~ld~E~~~~-~y~l~V~a~D~G~p~~sst~~v~I~v~ 417 (419)
T 3ubh_A 378 -----VNNKQLDADNNNA-YYEFIVTAKDKGEPPKSGVATVRVYTK 417 (419)
T ss_dssp -----EECSCSSSSCTTC-EEEEEEEEEECCSSCCEEEEEEEEEEE
T ss_pred -----EECcccCcccCCc-eEEEEEEEEECCcCCceeEEEEEEEEe
Confidence 9999999998 57 899999999999999999999999874
No 23
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=99.83 E-value=1.5e-20 Score=150.83 Aligned_cols=103 Identities=30% Similarity=0.367 Sum_probs=95.3
Q ss_pred CCCCeeeCCeeEEEEeCCCCCCeEEEEEEEEeCCCCC---CCCcEEEEEEeCC----CCCcEEEeCCCCeEEEeeecccc
Q psy1047 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPG---MNSKISYSVRGGD----GLGYFTIDNEGPLNHFRIVPTKI 73 (127)
Q Consensus 1 ~N~P~F~~~~y~~~v~E~~~~g~~v~~~~a~D~D~~g---~n~~i~y~i~~~~----~~~~F~i~~~tg~i~~~~~~~~~ 73 (127)
||+|+|.+..|.+.|+|+.++|+.|+++.|+|+|. | .|+.++|+|..++ ..++|.|++.+|.|
T Consensus 109 Dn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~-g~~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i--------- 178 (546)
T 1l3w_A 109 DNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDD-NIDSLNGVLSYSILKQDPEEPIPNLFTINRETGVI--------- 178 (546)
T ss_dssp CCCCEESSSCEEEEEETTCCSSEEEEECCEECCSC-CSSSSTTCCEEEEEEESSCCSCSCSEEECTTTCEE---------
T ss_pred cCcCEecCceeEEEEECCCCCCCEEEEEEEEcCCC-CCCCCCCEEEEEEeCCCCCcccCCcEEEeCCCceE---------
Confidence 69999999999999999999999999999999998 7 6899999998765 35799999999999
Q ss_pred CCCCCCceeeEEEc-cCCCCCCCCCeEEEEEEEEECCCCCcceeEEEEEEeEe
Q psy1047 74 DPGTKKKEYNIVVL-KLLDREIAPLGYNLTLRAVDKGTPPRETYKATPRNGLT 125 (127)
Q Consensus 74 ~~~~~~~~~~l~~~-~~ld~E~~~~~y~l~v~a~D~g~p~~~st~~i~i~~~~ 125 (127)
.+. ++||||... .|.|+|.|+|.|.|+++++++++|+++-
T Consensus 179 -----------~~~~~~LD~E~~~-~y~l~V~A~D~g~~~~s~~~~v~I~V~D 219 (546)
T 1l3w_A 179 -----------SLIGTGLDREKFP-EYTLTVQATDLEGAGLSVEGKAIIQITD 219 (546)
T ss_dssp -----------EECSCCCCTTTCC-EEEEEEEEEHHHHTSCEEECCEEEEEEC
T ss_pred -----------EEeccCCCcccCc-eEEEEEEEEECCCCCcceEEEEEEEEee
Confidence 764 799999999 9999999999999999999999999873
No 24
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=99.83 E-value=1.5e-20 Score=150.81 Aligned_cols=103 Identities=29% Similarity=0.363 Sum_probs=95.2
Q ss_pred CCCCeeeCCeeEEEEeCCCCCCeEEEEEEEEeCCCCC---CCCcEEEEEEeCC----CCCcEEEeCCCCeEEEeeecccc
Q psy1047 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPG---MNSKISYSVRGGD----GLGYFTIDNEGPLNHFRIVPTKI 73 (127)
Q Consensus 1 ~N~P~F~~~~y~~~v~E~~~~g~~v~~~~a~D~D~~g---~n~~i~y~i~~~~----~~~~F~i~~~tg~i~~~~~~~~~ 73 (127)
||+|+|.+..|.+.|+|+.++|+.++++.|+|+|. | .|+.++|+|.+++ ..++|.|++.+|.|
T Consensus 103 Dn~P~F~~~~y~~~V~E~~~~Gt~v~~v~A~D~D~-g~~~~N~~i~Ysi~~~~~~~~~~~~F~id~~tG~i--------- 172 (550)
T 3q2v_A 103 DNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADD-DVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVI--------- 172 (550)
T ss_dssp CCCCCBSCSEEEEEEETTCCTTCEEEECCBCCCSC-TTTCGGGCCEEEEEEEESCCSSSCSEEECTTTCEE---------
T ss_pred CCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCC-CCCCcceEEEEEEecCCCCCCcCCceEEcCCCeEE---------
Confidence 69999999999999999999999999999999998 7 7899999998754 35699999999999
Q ss_pred CCCCCCceeeEEE-ccCCCCCCCCCeEEEEEEEEECCCCCcceeEEEEEEeEe
Q psy1047 74 DPGTKKKEYNIVV-LKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPRNGLT 125 (127)
Q Consensus 74 ~~~~~~~~~~l~~-~~~ld~E~~~~~y~l~v~a~D~g~p~~~st~~i~i~~~~ 125 (127)
.+ .++||||... .|.|+|+|+|+|.|+++++++++|+++-
T Consensus 173 -----------~~~~~~LDrE~~~-~y~l~V~A~D~g~~~~s~t~~v~I~V~D 213 (550)
T 3q2v_A 173 -----------SVLTSGLDRESYP-TYTLVVQAADLQGEGLSTTAKAVITVKD 213 (550)
T ss_dssp -----------EECSSCCCTTTCS-EEEEEEEEESGGGTSCCCEEEEEEEEEC
T ss_pred -----------EEccCCCCcccCc-EEEEEEEEEcCCCCCeeEEEEEEEEecc
Confidence 66 5799999999 9999999999999999999999999874
No 25
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.83 E-value=2.9e-20 Score=120.94 Aligned_cols=90 Identities=24% Similarity=0.234 Sum_probs=80.4
Q ss_pred eeEEEEeCCCCCCeE--EEEEEEEeCCCCCCCCcEEEEEEeC----CCCCcEEEeCCCCeEEEeeeccccCCCCCCceee
Q psy1047 10 VYQATVKENQPIGTL--VITLKAADADPPGMNSKISYSVRGG----DGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYN 83 (127)
Q Consensus 10 ~y~~~v~E~~~~g~~--v~~~~a~D~D~~g~n~~i~y~i~~~----~~~~~F~i~~~tg~i~~~~~~~~~~~~~~~~~~~ 83 (127)
.|.+.|+|+.++|+. |.++ |.|. |.|+.|+|+|..+ +..++|.|++.+|.|
T Consensus 6 ~~~~~v~En~~~gt~~~v~~v---d~D~-g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i------------------- 62 (110)
T 1ncg_A 6 IPPINLPENSRGPFPQELVRI---RSGR-DKNLSLRYSVTGPGADQPPTGIFIINPISGQL------------------- 62 (110)
T ss_dssp CCCEEECSSCCCCSSEEEEEC---CCGG-GGGSCCEEEEESBTTTBSSTTSEEECTTTCEE-------------------
T ss_pred eeeEEEeCCCCCCCcEEEEEE---eCCC-CCCCEEEEEEeCCCCCCCcCCEEEEECCCCEE-------------------
Confidence 478999999999995 4444 7887 8899999999863 456899999999999
Q ss_pred EEEccCCCCCCCCCeEEEEEEEEECCCCCcceeEEEEEEeE
Q psy1047 84 IVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPRNGL 124 (127)
Q Consensus 84 l~~~~~ld~E~~~~~y~l~v~a~D~g~p~~~st~~i~i~~~ 124 (127)
.+.++||||... .|.|+|.|+|.|.|++++++++.|+++
T Consensus 63 -~~~~~LDrE~~~-~y~l~V~A~D~g~p~~~~~~~v~I~V~ 101 (110)
T 1ncg_A 63 -SVTKPLDRELIA-RFHLRAHAVDINGNQVENPIDIVINVI 101 (110)
T ss_dssp -EECSCCCTTTCC-EEEEEEEEECTTSCBCSCCEEEEEEEC
T ss_pred -EECCcCCcccCC-eEEEEEEEEECCCCceeeEEEEEEEEE
Confidence 899999999999 999999999999999999999999986
No 26
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=99.83 E-value=1.3e-19 Score=136.56 Aligned_cols=99 Identities=26% Similarity=0.303 Sum_probs=89.6
Q ss_pred CCCCeeeCCeeEEEEeCCCCCCeEEEEEEEEeCCCCCCCCcEEEEEE-eCCCCCcEEEeCCCCeEEEeeeccccCCCCCC
Q psy1047 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVR-GGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKK 79 (127)
Q Consensus 1 ~N~P~F~~~~y~~~v~E~~~~g~~v~~~~a~D~D~~g~n~~i~y~i~-~~~~~~~F~i~~~tg~i~~~~~~~~~~~~~~~ 79 (127)
+|+|+|.+..|.+.|+|+.++|+.|+++.|+|+| |+.|+|+|. .++..++|.|++.+|.|
T Consensus 209 Dn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D----n~~i~Y~i~~~~~~~~~F~Id~~tG~i--------------- 269 (316)
T 3ubf_A 209 KRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFA----DREIRYTLKAQGQGAGTFNIGPTSGIV--------------- 269 (316)
T ss_dssp CCCCEESSSSEEEEEETTCCTTCEEEECCEECTT----CCCEEEEEEEESSCTTTEEECTTTCEE---------------
T ss_pred CCCCEEcCCCceEEEeCCCCCCCEEEEEEEEeCC----CCEEEEEEEcCCCCCCeEEEECCeEEE---------------
Confidence 6999999999999999999999999999999998 478999997 57788999999999999
Q ss_pred ceeeEEEccCCCCCCC---CCeEEEEEEEEECCCCCcceeEEEEEEeEe
Q psy1047 80 KEYNIVVLKLLDREIA---PLGYNLTLRAVDKGTPPRETYKATPRNGLT 125 (127)
Q Consensus 80 ~~~~l~~~~~ld~E~~---~~~y~l~v~a~D~g~p~~~st~~i~i~~~~ 125 (127)
.+.++||||.. . .|.|+|.|+|.+. +++++++++|+++-
T Consensus 270 -----~~~~~LD~E~~~~~~-~y~l~V~A~dd~g-~~~~~~~v~I~V~D 311 (316)
T 3ubf_A 270 -----KLAKELDFEDLRQPH-VYSLIVTATEDSG-GFSTSVDLTIRVTD 311 (316)
T ss_dssp -----EECSCCCSSCTTSCS-EEEEEEEEEESSS-SCEEEEEEEEEEEC
T ss_pred -----EECCcCCccccCCCc-eEEEEEEEEECCC-CCEEEEEEEEEEEe
Confidence 99999999997 7 8999999995332 58999999999873
No 27
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=99.82 E-value=3e-20 Score=149.39 Aligned_cols=103 Identities=28% Similarity=0.316 Sum_probs=92.9
Q ss_pred CCCCeeeCCeeEEEEeCCCCCCeEEEEEEEEeCCCCC--CCCcEEEEEEeCCCC----CcEEEeCCCCeEEEeeeccccC
Q psy1047 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPG--MNSKISYSVRGGDGL----GYFTIDNEGPLNHFRIVPTKID 74 (127)
Q Consensus 1 ~N~P~F~~~~y~~~v~E~~~~g~~v~~~~a~D~D~~g--~n~~i~y~i~~~~~~----~~F~i~~~tg~i~~~~~~~~~~ 74 (127)
||+|+|.+..|.+.|+|+.++|+.|+++.|+|+|. | .|+.++|+|.++++. ++|.|++.+|.|
T Consensus 103 Dn~P~F~~~~y~~~V~En~~~Gt~v~~v~A~D~D~-g~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i---------- 171 (559)
T 3q2w_A 103 DNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADD-PNALNGMLRYRILSQAPSTPSPNMFTINNETGDI---------- 171 (559)
T ss_dssp CCCCEESCSEEEEEEETTCCTTCEEEECCEECSSC-TTSGGGCCEEEEEEEESCCSCTTCEEECTTTCEE----------
T ss_pred CCCCccCCCeeEEEEeCCCCCCcEEEEEEEEcCCC-CCCCceEEEEEEecCCCCCCCcceEEEeCCceEE----------
Confidence 69999999999999999999999999999999998 5 689999999875543 789999999999
Q ss_pred CCCCCceeeEEEcc-CCCCCCCCCeEEEEEEEEECCC---CCcceeEEEEEEeEe
Q psy1047 75 PGTKKKEYNIVVLK-LLDREIAPLGYNLTLRAVDKGT---PPRETYKATPRNGLT 125 (127)
Q Consensus 75 ~~~~~~~~~l~~~~-~ld~E~~~~~y~l~v~a~D~g~---p~~~st~~i~i~~~~ 125 (127)
.+.+ .||||... .|.|.|+|+|+|. ++++++++++|+|+-
T Consensus 172 ----------~~~~~~LD~E~~~-~y~l~V~A~D~~g~p~~~~s~t~~v~I~V~D 215 (559)
T 3q2w_A 172 ----------ITVAAGLDREKVQ-QYTLIIQATDMEGNPTYGLSNTATAVITVTD 215 (559)
T ss_dssp ----------EECCSCCCTTTCC-EEEEEEEEEHHHHCTTTCCEEEEEEEEEEEC
T ss_pred ----------EEEeccCCcccCC-EEEEEEEEEECCCCCCCCccceEEEEEEEEe
Confidence 7776 99999999 9999999999854 458999999999873
No 28
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=99.82 E-value=1.3e-19 Score=145.46 Aligned_cols=101 Identities=25% Similarity=0.291 Sum_probs=95.7
Q ss_pred CCeeeCCeeEEEEeCCCCCCeEEEEEEEEeCCCCCCCCcEEEEEEeCCCCCcEEEeCCCCeEEEeeeccccCCCCCCcee
Q psy1047 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEY 82 (127)
Q Consensus 3 ~P~F~~~~y~~~v~E~~~~g~~v~~~~a~D~D~~g~n~~i~y~i~~~~~~~~F~i~~~tg~i~~~~~~~~~~~~~~~~~~ 82 (127)
+|+|.+..|.+.|+|+.++|+.|+++.|+|+|. |.|+.|+|+|.. +..++|.|++.+|.|
T Consensus 329 ~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~-g~n~~i~y~i~~-~~~~~f~id~~tG~i------------------ 388 (550)
T 3q2v_A 329 APIFMPAERRVEVPEDFGVGQEITSYTAREPDT-FMDQKITYRIWR-DTANWLEINPETGAI------------------ 388 (550)
T ss_dssp CCEESSSSCEEEEETTCCSSCEEEECCEECCCC-STTCCCEEEEEE-CTTCCEEECTTTCEE------------------
T ss_pred CCeEcCcceEEEEecCCCCCCEEEEEeCCCCCC-CCCCCEEEEEec-CCCCcEEEeCCCcEE------------------
Confidence 899999999999999999999999999999999 999999999974 677899999999999
Q ss_pred eEEEccCCCCCCC-----CCeEEEEEEEEECCCCCcceeEEEEEEeEeC
Q psy1047 83 NIVVLKLLDREIA-----PLGYNLTLRAVDKGTPPRETYKATPRNGLTC 126 (127)
Q Consensus 83 ~l~~~~~ld~E~~-----~~~y~l~v~a~D~g~p~~~st~~i~i~~~~~ 126 (127)
.+.+.||||.. . .|.|+|.|+|.|.|+++++++++|+++-+
T Consensus 389 --~~~~~lDrE~~~~~~~~-~y~l~V~A~D~g~p~~s~~~~v~I~V~Dv 434 (550)
T 3q2v_A 389 --FTRAEMDREDAEHVKNS-TYVALIIATDDGSPIATGTGTLLLVLLDV 434 (550)
T ss_dssp --EECSCCCTTCTTTCCSS-EEEEEEEEECCSSSCCCEEEEEEEEEECC
T ss_pred --EECCccCcccccccCCC-EEEEEEEEEeCCCCcceeEEEEEEEEEeC
Confidence 99999999998 8 99999999999999999999999999864
No 29
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=99.82 E-value=2.3e-19 Score=144.21 Aligned_cols=101 Identities=29% Similarity=0.326 Sum_probs=95.0
Q ss_pred CCeeeCCeeEEEEeCCCCCCeEEEEEEEEeCCCCCCCCcEEEEEEeCCCCCcEEEeCCCCeEEEeeeccccCCCCCCcee
Q psy1047 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEY 82 (127)
Q Consensus 3 ~P~F~~~~y~~~v~E~~~~g~~v~~~~a~D~D~~g~n~~i~y~i~~~~~~~~F~i~~~tg~i~~~~~~~~~~~~~~~~~~ 82 (127)
+|+|.+..|.+.|+|+.++|+.|+++.|+|+|. |.|+.|+|+|.. +..++|.|++.+|.|
T Consensus 335 ~P~f~~~~~~~~v~En~~~g~~v~~v~A~D~D~-g~n~~i~Ysi~~-~~~~~f~Id~~tG~i------------------ 394 (559)
T 3q2w_A 335 NPYFAPNPKIIRQEEGLHAGTMLTTLTAQDPDR-YMQQNIRYTKLS-DPANWLKIDPVNGQI------------------ 394 (559)
T ss_dssp CCEESSSEEEEEEESCCCTTCEEEECCEECSCS-SSCCCEEEEEEE-CTTCCEEECTTTCEE------------------
T ss_pred CCcccccceEEEEeCCCCCCCEEEEEEEECCCC-CCCCceEEEEcc-CCccceEecCCceEE------------------
Confidence 699999999999999999999999999999999 899999999985 567899999999999
Q ss_pred eEEEccCCCCCCC----CCeEEEEEEEEECCCCCcceeEEEEEEeEeC
Q psy1047 83 NIVVLKLLDREIA----PLGYNLTLRAVDKGTPPRETYKATPRNGLTC 126 (127)
Q Consensus 83 ~l~~~~~ld~E~~----~~~y~l~v~a~D~g~p~~~st~~i~i~~~~~ 126 (127)
.+.+.||||.. . .|.|+|.|+|.|.|+++++++++|+++-+
T Consensus 395 --~~~~~lDrE~~~~~~~-~y~l~V~A~D~g~p~~ss~~~v~I~V~Dv 439 (559)
T 3q2w_A 395 --TTIAVLDRESPNVKNN-IYNATFLASDNGIPPMSGTGTLQIYLLDI 439 (559)
T ss_dssp --EESSCCCSSSTTSCSS-EEEEEEEEEECSSSCCEEEEEEEEEEECC
T ss_pred --EEccccCcccccccCC-EEEEEEEEEcCCCCcceEEEEEEEEEEEc
Confidence 89999999975 7 89999999999999999999999999854
No 30
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=99.81 E-value=9.6e-20 Score=152.93 Aligned_cols=103 Identities=30% Similarity=0.367 Sum_probs=95.3
Q ss_pred CCCCeeeCCeeEEEEeCCCCCCeEEEEEEEEeCCCCC---CCCcEEEEEEeCC----CCCcEEEeCCCCeEEEeeecccc
Q psy1047 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPG---MNSKISYSVRGGD----GLGYFTIDNEGPLNHFRIVPTKI 73 (127)
Q Consensus 1 ~N~P~F~~~~y~~~v~E~~~~g~~v~~~~a~D~D~~g---~n~~i~y~i~~~~----~~~~F~i~~~tg~i~~~~~~~~~ 73 (127)
||+|+|.+..|.+.|+|+.++|+.|+++.|+|+|. | .|+.++|+|..++ ..++|.|++.+|.|
T Consensus 258 Dn~P~F~~~~y~~~V~En~~~Gt~V~~v~AtD~D~-g~~~~N~~v~Ysi~~~~~~~~~~~~F~Id~~tG~I--------- 327 (880)
T 1q55_A 258 DNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDD-NIDSLNGVLSYSILKQDPEEPIPNLFTINRETGVI--------- 327 (880)
T ss_dssp CCCCEESSSCEEEEEETTCCSSEEEEECCEECCSC-CSSSSTTCCEEEEEEESSCCSCSCSEEECTTTCEE---------
T ss_pred CCCCCccCCcEEEEEeCCCCCCceeEEEEEEcCCC-CCCCcCcEEEEEEcCCCCCcccCCeEEEccCCccE---------
Confidence 69999999999999999999999999999999998 7 6899999998765 35799999999999
Q ss_pred CCCCCCceeeEEEc-cCCCCCCCCCeEEEEEEEEECCCCCcceeEEEEEEeEe
Q psy1047 74 DPGTKKKEYNIVVL-KLLDREIAPLGYNLTLRAVDKGTPPRETYKATPRNGLT 125 (127)
Q Consensus 74 ~~~~~~~~~~l~~~-~~ld~E~~~~~y~l~v~a~D~g~p~~~st~~i~i~~~~ 125 (127)
.+. +.||||... .|.|+|.|+|.|.|+++++++++|+++-
T Consensus 328 -----------~~~~~~LDrE~~~-~y~l~V~A~D~g~~~~s~~~~v~I~V~D 368 (880)
T 1q55_A 328 -----------SLIGTGLDREKFP-EYTLTVQATDLEGAGLSVEGKAIIQITD 368 (880)
T ss_dssp -----------EECSCCCCTTTCC-EEEEEEEEEHHHHTSCEEECCEEEEEEC
T ss_pred -----------EEecccCCHHHcc-eeEEEEEEEECCCCCccceeEEEEEEEe
Confidence 764 789999999 9999999999999999999999999863
No 31
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=99.80 E-value=2e-19 Score=144.22 Aligned_cols=101 Identities=25% Similarity=0.305 Sum_probs=94.9
Q ss_pred CCeeeCCeeEEEEeCCCCCCeEEEEEEEEeCCCCCCCCcEEEEEEeCCCCCcEEEeCCCCeEEEeeeccccCCCCCCcee
Q psy1047 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEY 82 (127)
Q Consensus 3 ~P~F~~~~y~~~v~E~~~~g~~v~~~~a~D~D~~g~n~~i~y~i~~~~~~~~F~i~~~tg~i~~~~~~~~~~~~~~~~~~ 82 (127)
+|+|.+..|.+.|+|+.++|+.|+++.|+|+|. |.|+.++|+|.. +..++|.|++.+|.|
T Consensus 335 ~P~f~~~~y~~~V~En~~~g~~v~~v~A~D~D~-g~n~~i~ysi~~-~~~~~F~Id~~tG~i------------------ 394 (546)
T 1l3w_A 335 APFFVPAVSRVDVSEDLSRGEKIISLVAQDPDK-QQIQKLSYFIGN-DPARWLTVNKDNGIV------------------ 394 (546)
T ss_dssp CCEESSCEECCCBCTTCCSSEEEEECCEECCCT-TCCCCEEEEECC-CSSCCCEEETTTTEE------------------
T ss_pred CCcEecceEEEEEeCCCCCCCEEEEEEEECCCC-CCCceEEEEECC-CCCCcEEEeCCcEEE------------------
Confidence 899999999999999999999999999999999 999999999974 567899999999999
Q ss_pred eEEEccCCCCCCC----CCeEEEEEEEEECCCCCcceeEEEEEEeEeC
Q psy1047 83 NIVVLKLLDREIA----PLGYNLTLRAVDKGTPPRETYKATPRNGLTC 126 (127)
Q Consensus 83 ~l~~~~~ld~E~~----~~~y~l~v~a~D~g~p~~~st~~i~i~~~~~ 126 (127)
.+.++||||.. . .|.|+|.|+|.|.|+++++++++|+++-+
T Consensus 395 --~~~~~lD~E~~~~~~~-~y~l~V~a~D~g~p~~s~~~~v~I~V~Dv 439 (546)
T 1l3w_A 395 --TGNGNLDRESEYVKNN-TYTVIMLVTDDGVSVGTGTGTLILHVLDV 439 (546)
T ss_dssp --EECSCCCTTSSSCCSS-CCEEEEEEEECSSSCCCCCEEEECCBCCC
T ss_pred --EECCccCCccccCCCC-EEEEEEEEEECCCCCcEeEEEEEEEEEEC
Confidence 89999999997 7 89999999999999999999999998754
No 32
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=99.80 E-value=1.6e-19 Score=129.16 Aligned_cols=96 Identities=19% Similarity=0.360 Sum_probs=85.8
Q ss_pred CCCCeeeCCeeE--EEEeCCCCCCeEEEEEEEEeCCCCCCCCcEEEEEEeCCCCCcEEEeCCCCeEEEeeeccccCCCCC
Q psy1047 1 MNAPVFSDFVYQ--ATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTK 78 (127)
Q Consensus 1 ~N~P~F~~~~y~--~~v~E~~~~g~~v~~~~a~D~D~~g~n~~i~y~i~~~~~~~~F~i~~~tg~i~~~~~~~~~~~~~~ 78 (127)
+|+|+|.+..|. +.|+|+.++|+.|+++.|+|+|. +.++|+|..++..++|.|++.+|.|
T Consensus 3 n~~P~F~~~~y~~~~~V~E~~~~Gt~v~~v~A~D~D~----~~~~y~i~~~~~~~~F~Id~~tG~i-------------- 64 (210)
T 3mvs_A 3 NRLPFFTNHFFDTYLLISEDTPVGSSVTQLLARDMDN----DPLVFGVSGEEASRFFAVEPDTGVV-------------- 64 (210)
T ss_dssp CCCCEECCGGGTSCEEEETTCCTTCEEEECCEECTTC----CCCEEEEESHHHHHHEEECTTTCEE--------------
T ss_pred CCCCccCCCccceEEEEeCCCCCCCEEEEEEEEeCCC----CcEEEEEeCCCCCCcEEEeCCCCEE--------------
Confidence 689999999997 79999999999999999999996 3589999866667899999999999
Q ss_pred CceeeEEEccCCCCCCCCCeEEEEEEEEECCCCCcceeEEEEEEeE
Q psy1047 79 KKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPRNGL 124 (127)
Q Consensus 79 ~~~~~l~~~~~ld~E~~~~~y~l~v~a~D~g~p~~~st~~i~i~~~ 124 (127)
.+.++||||... .|.|.|.|+|.+.+ ++++++|+++
T Consensus 65 ------~~~~~LD~E~~~-~y~l~v~a~D~~~~---~~~~v~I~V~ 100 (210)
T 3mvs_A 65 ------WLRQPLDRETKS-EFTVEFSVSDHQGV---ITRKVNIQVG 100 (210)
T ss_dssp ------EESSCCCTTTCC-EEEEEEEEECSSCE---EEEEEEEEEE
T ss_pred ------EECCccCCcccc-eEEEEEEEEeCCCC---EEEEEEEEEE
Confidence 999999999999 99999999998764 5677888776
No 33
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=99.78 E-value=1.3e-18 Score=135.50 Aligned_cols=100 Identities=24% Similarity=0.217 Sum_probs=90.8
Q ss_pred CCCCeeeCCe--eEEEEeCCCCCCeEEEEEEEEeCCCCCCCCcEEEEEEeCCCCCcEEEeCCCCeEEEeeeccccCCCCC
Q psy1047 1 MNAPVFSDFV--YQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTK 78 (127)
Q Consensus 1 ~N~P~F~~~~--y~~~v~E~~~~g~~v~~~~a~D~D~~g~n~~i~y~i~~~~~~~~F~i~~~tg~i~~~~~~~~~~~~~~ 78 (127)
||+|+|.+.. |.+.|+|+.++|+.|+++.|+|+|. |.| ++|+|..++..++|.|++.+|.|
T Consensus 106 Dn~P~F~~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~-g~n--~~y~i~~~~~~~~F~I~~~tG~i-------------- 168 (419)
T 3ubh_A 106 DEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDT-DHN--IHYFIVRDRTGGRFEVDERSGVV-------------- 168 (419)
T ss_dssp CSCCEECCSSSSCEEEECTTCCTTCEEEECCEECSST-TCC--EEEEEEEESSSSCEEECTTTCEE--------------
T ss_pred CCCCcccCCCCcEEEEEeCCCCCCCEEEEEEEECCCC-Cce--eEEEEEeCCCCCeEEEeCCceEE--------------
Confidence 6999999877 8899999999999999999999998 766 99999887778899999999999
Q ss_pred CceeeEEEccCCCCCCCCCeEEEEEEEEECCCC----CcceeEEEEEEeE
Q psy1047 79 KKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTP----PRETYKATPRNGL 124 (127)
Q Consensus 79 ~~~~~l~~~~~ld~E~~~~~y~l~v~a~D~g~p----~~~st~~i~i~~~ 124 (127)
.+.+.||+|... +|.|+|.|+|.|.| +++++++++|++.
T Consensus 169 ------~~~~~ld~e~~~-~y~l~V~A~D~g~~~~~~~~~~t~~v~I~V~ 211 (419)
T 3ubh_A 169 ------RTRGTDLFQLDM-EYVLYVKAEDQNGKVDDRRFQSTPEERLSIV 211 (419)
T ss_dssp ------EECSSSCCCBTC-EEEEEEEEEEEEEEC--CCEEECCCEEEEEE
T ss_pred ------EEeccccccccc-EEEEEEEEEECCCCccCcccccceEEEEEEE
Confidence 888999999999 99999999998865 5678888888875
No 34
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=99.77 E-value=1e-18 Score=146.80 Aligned_cols=101 Identities=25% Similarity=0.305 Sum_probs=95.0
Q ss_pred CCeeeCCeeEEEEeCCCCCCeEEEEEEEEeCCCCCCCCcEEEEEEeCCCCCcEEEeCCCCeEEEeeeccccCCCCCCcee
Q psy1047 3 APVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEY 82 (127)
Q Consensus 3 ~P~F~~~~y~~~v~E~~~~g~~v~~~~a~D~D~~g~n~~i~y~i~~~~~~~~F~i~~~tg~i~~~~~~~~~~~~~~~~~~ 82 (127)
+|+|.+..|.+.|+|+.++|+.|+++.|+|+|. |.|+.|+|+|.. +..++|.|++.+|.|
T Consensus 484 ~P~f~~~~y~~~V~En~~~Gt~V~~v~A~D~D~-g~n~~v~Ysi~~-~~~~~F~Id~~tG~I------------------ 543 (880)
T 1q55_A 484 APFFVPAVSRVDVSEDLSRGEKIISLVAQDPDK-QQIQKLSYFIGN-DPARWLTVNKDNGIV------------------ 543 (880)
T ss_dssp CCEESSCEECCCBCTTCCSSEEEEECCEECCCT-TCCCCEEEEECC-CSSCCCEEETTTTEE------------------
T ss_pred CCEEecCceEEEEeCCCCCCCEEEEEEEEeCCC-CCCCcEEEEECC-CCCCCEEEeCCccEE------------------
Confidence 899999999999999999999999999999998 899999999974 567899999999999
Q ss_pred eEEEccCCCCCCC----CCeEEEEEEEEECCCCCcceeEEEEEEeEeC
Q psy1047 83 NIVVLKLLDREIA----PLGYNLTLRAVDKGTPPRETYKATPRNGLTC 126 (127)
Q Consensus 83 ~l~~~~~ld~E~~----~~~y~l~v~a~D~g~p~~~st~~i~i~~~~~ 126 (127)
.+.++||||.. . .|.|+|.|+|.|.|+++++++++|+++-+
T Consensus 544 --~~~~~LDrE~~~~~~~-~y~l~V~A~D~g~p~~sst~tv~I~V~Dv 588 (880)
T 1q55_A 544 --TGNGNLDRESEYVKNN-TYTVIMLVTDDGVSVGTGTGTLILHVLDV 588 (880)
T ss_dssp --EECSCCCTTSSSCCSS-CCEEEEEEEECSSSCCCCCEEEECCBCCC
T ss_pred --EECCccCcccccCCCC-EEEEEEEEEECCCCCcEeEEEEEEEEEeC
Confidence 89999999997 7 89999999999999999999999998754
No 35
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=99.73 E-value=3.5e-17 Score=117.48 Aligned_cols=90 Identities=28% Similarity=0.286 Sum_probs=82.2
Q ss_pred EEEEeCCCCCCeEEEEEEEEeCCCCCCCCcEEEEEEeCC----CCCcEEEeCCCCeEEEeeeccccCCCCCCceeeEEEc
Q psy1047 12 QATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD----GLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVL 87 (127)
Q Consensus 12 ~~~v~E~~~~g~~v~~~~a~D~D~~g~n~~i~y~i~~~~----~~~~F~i~~~tg~i~~~~~~~~~~~~~~~~~~~l~~~ 87 (127)
.+.|+|+.+ |+.+.++.|.|.|. +.|+.|+|+|.+++ +.++|.|++.+|.| .+.
T Consensus 6 ~~~V~En~~-g~~~~~v~~~~~D~-~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i--------------------~~~ 63 (215)
T 2qvi_A 6 PINLPENSR-GPFPQELVRIRSDR-DKNLSLRYSVTGPGADQPPTGIFIINPISGQL--------------------SVT 63 (215)
T ss_dssp CEEEESSCC-CCSSEEEEECCCGG-GGTSCEEEEEESTTSSSTTCSSEEECTTTCEE--------------------EEC
T ss_pred cEEEcCCCC-CCCCEEEEEEeCCC-CCCceEEEEEECCCCCCCCCCcEEEeCCccEE--------------------EEC
Confidence 578999998 88888888999998 88999999998643 46899999999999 899
Q ss_pred cCCCCCCCCCeEEEEEEEEECCCCCcceeEEEEEEeE
Q psy1047 88 KLLDREIAPLGYNLTLRAVDKGTPPRETYKATPRNGL 124 (127)
Q Consensus 88 ~~ld~E~~~~~y~l~v~a~D~g~p~~~st~~i~i~~~ 124 (127)
++||||... .|.|+|.|+|.|.|+++++++++|+++
T Consensus 64 ~~LDrE~~~-~y~l~v~a~D~g~~~~~~~~~v~I~V~ 99 (215)
T 2qvi_A 64 KPLDRELIA-RFHLRAHAVDINGNQVENPIDIVINVI 99 (215)
T ss_dssp SCCCTTTCS-EEEEEEEEEETTTCCCEEEEEEEEEEE
T ss_pred cccCcccCC-eEEEEEEEEECCCCceeeeEEEEEEEe
Confidence 999999999 999999999999999999999999987
No 36
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=99.73 E-value=7.3e-19 Score=128.60 Aligned_cols=97 Identities=15% Similarity=0.093 Sum_probs=80.7
Q ss_pred eeeCCeeEEEEeCCCCCCeEEEEEEEEeCCCCCC--CCcEE------EEEEeCCCCCcEEEeCCCCeEEEeeeccccCCC
Q psy1047 5 VFSDFVYQATVKENQPIGTLVITLKAADADPPGM--NSKIS------YSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPG 76 (127)
Q Consensus 5 ~F~~~~y~~~v~E~~~~g~~v~~~~a~D~D~~g~--n~~i~------y~i~~~~~~~~F~i~~~tg~i~~~~~~~~~~~~ 76 (127)
+|.++.|.+.|+|++++|+.|+++.|+|+|. |. +..|. |++..+ ...+|.|++.+|.|
T Consensus 2 ~F~~~~Y~~~V~E~~~~Gt~v~~v~A~D~D~-g~~~~~~i~~~~~~~y~i~~~-~~~~F~Id~~tG~i------------ 67 (246)
T 2x2u_A 2 YFSRDAYWEKLYVDQAAGTPLLYVHALRDAP-EEVPSFRLGQHLYGTYRTRLH-ENNWIRIQEDTGLL------------ 67 (246)
T ss_dssp EESCSEEEEEEETTBCTTCEEEECCEECSST-TCCCCCEECSEEECGGGCEEE-ECCSEEECTTTCEE------------
T ss_pred CccCCceEEEeeCCCCCCCEEEEEEEEcCCC-CCcceEEEeeccccceeccCC-CCCEEEECCCcEEE------------
Confidence 6999999999999999999999999999997 53 45554 555443 56799999999999
Q ss_pred CCCceeeEEEccCCCCCCCCCeE------------EEEEEEEECCCC--CcceeEEEEEEeE
Q psy1047 77 TKKKEYNIVVLKLLDREIAPLGY------------NLTLRAVDKGTP--PRETYKATPRNGL 124 (127)
Q Consensus 77 ~~~~~~~l~~~~~ld~E~~~~~y------------~l~v~a~D~g~p--~~~st~~i~i~~~ 124 (127)
.+.++||||... .| .|+|.|+|.|.| +++++++|.|+++
T Consensus 68 --------~~~~~LDrE~~~-~y~~~~~G~p~~~~~l~V~a~D~g~~~~~~~~~~~v~I~V~ 120 (246)
T 2x2u_A 68 --------YLQRSLDHSSWE-KLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFS 120 (246)
T ss_dssp --------EESSCBCHHHHH-HHHHTSTTSCCCEEEEEEECC-------CCCTTTEEEEEEE
T ss_pred --------EECCcCChhHhh-hhccccCCCcccceEEEEEEEcCCCCCCcccceEEEEEEEE
Confidence 999999999998 89 999999999998 7889999999986
No 37
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=99.72 E-value=6.2e-17 Score=116.26 Aligned_cols=92 Identities=32% Similarity=0.307 Sum_probs=81.1
Q ss_pred eeEEEEeCCC--CCCeEEEEEEEEeCCCCCCCCcEEEEEEeCCCCCcEEEeCCCCeEEEeeeccccCCCCCCceeeEEEc
Q psy1047 10 VYQATVKENQ--PIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVL 87 (127)
Q Consensus 10 ~y~~~v~E~~--~~g~~v~~~~a~D~D~~g~n~~i~y~i~~~~~~~~F~i~~~tg~i~~~~~~~~~~~~~~~~~~~l~~~ 87 (127)
.|.+.|.|+. +.|+.|+++ |+|+|. | |+.|+|+|.+++...+|.|++.+|.| .+.
T Consensus 5 ~~~~~v~En~~~p~~~~v~~v-a~D~D~-g-n~~i~Y~l~~~~~~~~F~Id~~tG~i--------------------~~~ 61 (215)
T 2a4e_A 5 WNQFFVIEEYTGPDPVLVGRL-HSDIDS-G-DGNIKYILSGEGAGTIFVIDDKSGNI--------------------HAT 61 (215)
T ss_dssp CCEEEEETTCCSSSCEEEEEC-CCTTCC-S-SSCEEEEEEETTBTTTEEECTTTCEE--------------------EEC
T ss_pred EeeEEEeccCCCCCCEEEEEE-EECCCC-C-CCeEEEEEECCCCCCeEEEECCceEE--------------------EEC
Confidence 4788999994 468888888 899998 7 78999999876556799999999999 899
Q ss_pred cCCCCCCCCCeEEEEEEEEECCC-CCcceeEEEEEEeEe
Q psy1047 88 KLLDREIAPLGYNLTLRAVDKGT-PPRETYKATPRNGLT 125 (127)
Q Consensus 88 ~~ld~E~~~~~y~l~v~a~D~g~-p~~~st~~i~i~~~~ 125 (127)
++||||... .|.|.|.|+|.|. ++++++++++|+++-
T Consensus 62 ~~LDrE~~~-~y~l~v~a~D~~~~~~~~~~~~v~I~V~D 99 (215)
T 2a4e_A 62 KTLDREERA-QYTLMAQAVDRDTNRPLEPPSEFIVKVQD 99 (215)
T ss_dssp SCCCTTTCS-EEEEEEEEEETTTCCEEEEEEEEEEEEEC
T ss_pred CccCCccCC-EEEEEEEEEECCCCCcccccEEEEEEEee
Confidence 999999999 9999999999986 678999999999863
No 38
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=99.69 E-value=2.5e-16 Score=112.58 Aligned_cols=89 Identities=25% Similarity=0.278 Sum_probs=79.4
Q ss_pred eEEEEeCCCC--CCeEEEEEEEEeCCCCCCCCcEEEEEEeC----CCCCcEEEeCCCCeEEEeeeccccCCCCCCceeeE
Q psy1047 11 YQATVKENQP--IGTLVITLKAADADPPGMNSKISYSVRGG----DGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNI 84 (127)
Q Consensus 11 y~~~v~E~~~--~g~~v~~~~a~D~D~~g~n~~i~y~i~~~----~~~~~F~i~~~tg~i~~~~~~~~~~~~~~~~~~~l 84 (127)
..+.|+|+.+ .+..|+++.| |+|. |+.++|+|.++ ++.++|.|++.+|.|
T Consensus 5 ~~~~V~En~~~~~~~~v~~v~a-D~d~---n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i-------------------- 60 (213)
T 3qrb_A 5 AAISCPENEKGEFPKNLVQIKS-NRDK---ETKVFYSITGQGADKPPVGVFIIERETGWL-------------------- 60 (213)
T ss_dssp EEEEEETTCCSSSSEEEEECCC-GGGG---TSCEEEEEESBTTTBSSTTSEEECTTTCEE--------------------
T ss_pred CCEEEeCCCCCCCCcEEEEEEE-CCCC---CceEEEEEEcCCCCCCCCCeEEEECCCCEE--------------------
Confidence 3689999998 6788999988 7775 78999999873 345699999999999
Q ss_pred EEccCCCCCCCCCeEEEEEEEEECCCCCcceeEEEEEEeE
Q psy1047 85 VVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPRNGL 124 (127)
Q Consensus 85 ~~~~~ld~E~~~~~y~l~v~a~D~g~p~~~st~~i~i~~~ 124 (127)
.+.++||||... .|.|.|.|+|.|.|+++++++++|+++
T Consensus 61 ~~~~~LDrE~~~-~y~l~v~a~D~~~~~~~~~~~v~I~V~ 99 (213)
T 3qrb_A 61 KVTQPLDREAIA-KYILYSHAVSSNGEAVEDPMEIVITVT 99 (213)
T ss_dssp EECSCCCTTTCS-EEEEEEEEEETTSCBCSCCEEEEEEEE
T ss_pred EECCccCcccCc-eEEEEEEEEeCCCCcccceEEEEEEEE
Confidence 899999999999 999999999999999999999999986
No 39
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=99.67 E-value=6.8e-16 Score=109.79 Aligned_cols=89 Identities=17% Similarity=0.136 Sum_probs=79.9
Q ss_pred eEEEEeCCCCCC--eEEEEEEEEeCCCCCCCCcEEEEEEeCCCCCcEEEeCCCCeEEEeeeccccCCCCCCceeeEEEcc
Q psy1047 11 YQATVKENQPIG--TLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLK 88 (127)
Q Consensus 11 y~~~v~E~~~~g--~~v~~~~a~D~D~~g~n~~i~y~i~~~~~~~~F~i~~~tg~i~~~~~~~~~~~~~~~~~~~l~~~~ 88 (127)
..+.|+|+.+.| ..++++. +|+|. |.+ +|+|.+++..++|.|++.+|.| .+.+
T Consensus 5 ~~~~V~En~~~~~~~~v~~v~-~D~D~-g~~---~Y~i~~~~~~~~F~Id~~tG~i--------------------~~~~ 59 (203)
T 3ppe_A 5 NRMHIREEIDSPLPHHVGKLT-SSVGN-KNA---MYIIEGESANTIFKVQGYDGDI--------------------YAFE 59 (203)
T ss_dssp SEEEEETTCCSSSCEEEEECC-BCCCC-TTE---EEEEEETTBTTTEEEETTTTEE--------------------EESS
T ss_pred ccEEEEccCCCCCCEEEEEEE-ecCCC-CCc---EEEEecCCCCCeEEEECCcCEE--------------------EECc
Confidence 468899999988 8888887 99998 665 9999987778899999999999 8999
Q ss_pred CCCCCCCCCeEEEEEEEEECCCC-CcceeEEEEEEeEe
Q psy1047 89 LLDREIAPLGYNLTLRAVDKGTP-PRETYKATPRNGLT 125 (127)
Q Consensus 89 ~ld~E~~~~~y~l~v~a~D~g~p-~~~st~~i~i~~~~ 125 (127)
+||||... .|.|+|.|+|.|.| +++++++++|+++-
T Consensus 60 ~LDrE~~~-~y~l~v~a~D~g~~~~~~~~~~v~I~V~D 96 (203)
T 3ppe_A 60 RLDREKKA-EYELTAHIIDRRNNRSLEPPSKFIIKVSD 96 (203)
T ss_dssp CCCTTTCC-EEEEEEEEEETTTTEECSCCEEEEEEEEC
T ss_pred cccccccc-eEEEEEEEEECCCCCcccceEEEEEEEcC
Confidence 99999999 99999999999987 68889999998863
No 40
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=99.64 E-value=9.5e-16 Score=109.94 Aligned_cols=88 Identities=22% Similarity=0.183 Sum_probs=78.4
Q ss_pred eEEEEeCCCCCC--eEEEEEEEEeCCCCCCCCcEEEEEEe----CCCCCcEEEeCCCCeEEEeeeccccCCCCCCceeeE
Q psy1047 11 YQATVKENQPIG--TLVITLKAADADPPGMNSKISYSVRG----GDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNI 84 (127)
Q Consensus 11 y~~~v~E~~~~g--~~v~~~~a~D~D~~g~n~~i~y~i~~----~~~~~~F~i~~~tg~i~~~~~~~~~~~~~~~~~~~l 84 (127)
..+.|+|+.++| ..++++.|.|+|. .++|+|.. +++.++|.|++.+|.|
T Consensus 6 ~~~~V~En~~~g~~~~v~~v~a~D~d~-----~i~Y~i~~~~~~~~~~~~F~Id~~tG~i-------------------- 60 (218)
T 3k5r_A 6 SPILIPENQRQPFPRDVGKVVDSDRPE-----GSKFRLTGKGVDQDPKGTFRINENTGSV-------------------- 60 (218)
T ss_dssp CCEEEETTCCSSCCEEEEECBCTTCCT-----TCEEEEEEBTTTBSSTTSEEECTTTCEE--------------------
T ss_pred CcEEEecCCCCCCCEEEEEEEecCCCc-----eEEEEEEcCCCCCCCCCeEEEeCCceEE--------------------
Confidence 367899999998 8888888887774 68999975 3456899999999999
Q ss_pred EEccCCCCCCCCCeEEEEEEEEECCCCCcceeEEEEEEeE
Q psy1047 85 VVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPRNGL 124 (127)
Q Consensus 85 ~~~~~ld~E~~~~~y~l~v~a~D~g~p~~~st~~i~i~~~ 124 (127)
.+.++||||... .|.|+|.|+|.|.|+++++++++|+++
T Consensus 61 ~~~~~LDrE~~~-~y~l~v~a~D~g~~~~~~~~~v~I~V~ 99 (218)
T 3k5r_A 61 SVTRTLDRETIA-TYQLYVETTDASGKTLEGPVPLEVIVI 99 (218)
T ss_dssp EECSCCCTTTCS-EEEEEEEEECSSSCEEEEEEEEEEEEE
T ss_pred EECCcCCcccCC-EEEEEEEEEECCCCceeeeEEEEEEEE
Confidence 899999999999 999999999999999999999999987
No 41
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=99.64 E-value=8.4e-17 Score=114.70 Aligned_cols=89 Identities=26% Similarity=0.238 Sum_probs=74.2
Q ss_pred EEEEeCCCCCC--eEEEEEEEEeCCCCCCCCcEEEEEEeCCCCCcEEEeCCCCeEEEeeeccccCCCCCCceeeEEEccC
Q psy1047 12 QATVKENQPIG--TLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKL 89 (127)
Q Consensus 12 ~~~v~E~~~~g--~~v~~~~a~D~D~~g~n~~i~y~i~~~~~~~~F~i~~~tg~i~~~~~~~~~~~~~~~~~~~l~~~~~ 89 (127)
.+.|+|+.+.+ ..++++ |+|+|. | ++.|+|+|.+++...+|.|++.+|.| .+.++
T Consensus 6 ~~~v~En~~~~~~~~v~~~-a~D~D~-g-~~~i~Y~l~~~~~~~~F~Id~~tG~i--------------------~~~~~ 62 (207)
T 3lnd_A 6 QFFLLEEYTGSDYQYVGKL-HSDQDR-G-DGSLKYILSGDGAGDLFIINENTGDI--------------------QATKR 62 (207)
T ss_dssp CEEEESCBCSSSCEEEEEC-CCTTCC-S-STTBCCCCCSSSBTTTEEECTTTCEE--------------------EECSC
T ss_pred ccEEEeecCCCCCEEEEEE-EeCCCC-C-CceEEEEEECCCCCCeEEEECCceEE--------------------EECCC
Confidence 46799998855 578888 899998 7 68899999866556799999999999 89999
Q ss_pred CCCCCCCCeEEEEEEEEECC-CCCcceeEEEEEEeE
Q psy1047 90 LDREIAPLGYNLTLRAVDKG-TPPRETYKATPRNGL 124 (127)
Q Consensus 90 ld~E~~~~~y~l~v~a~D~g-~p~~~st~~i~i~~~ 124 (127)
||||... .|.|.|.|+|.| .|+++++++++|+++
T Consensus 63 LDrE~~~-~y~l~v~a~D~~~~~~~~~~~~v~I~V~ 97 (207)
T 3lnd_A 63 LDREEKP-VYILRAQAVNRRTGRPVEPESEFIIKIH 97 (207)
T ss_dssp CCGGGCC-EEEC----CBSSSCCCCSCCCCCEEEEE
T ss_pred cCcccCC-EEEEEEEEEECCCCCccccEEEEEEEEC
Confidence 9999999 999999999998 588999999999886
No 42
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.61 E-value=1.2e-16 Score=106.02 Aligned_cols=90 Identities=16% Similarity=0.136 Sum_probs=75.6
Q ss_pred CCeeEEEEeCCCCCCeEEEEEEEEeCCCCCCCCcE---EEEEEeCCCCCcEEEeCCCCeEEEeeeccccCCCCCCceeeE
Q psy1047 8 DFVYQATVKENQPIGTLVITLKAADADPPGMNSKI---SYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNI 84 (127)
Q Consensus 8 ~~~y~~~v~E~~~~g~~v~~~~a~D~D~~g~n~~i---~y~i~~~~~~~~F~i~~~tg~i~~~~~~~~~~~~~~~~~~~l 84 (127)
...|.+.|+|+.++|+.|+++ |+|+|. +. +.+ +|+|.+++...+|.|++.||.|
T Consensus 10 ~~~~~~~V~E~~~~Gt~V~~v-a~D~d~-~~-~~i~~~~Y~i~~~~~~~~F~Id~~tG~i-------------------- 66 (125)
T 1wyj_A 10 SATITYSVLEETDRGSLVGNL-AKDLGL-SL-RELITRGAQILSKGNKQLLQLEQKSGNL-------------------- 66 (125)
T ss_dssp CCCCCEEECSSCCTTCEEEES-TTTTTC-CH-HHHHHTTCEEECSSSSCSEEECSSSSEE--------------------
T ss_pred CceEEEEEECCCCCCCEEEEE-EecCCC-CC-CceeeEEEEEecCCCCCeEEEECCccEE--------------------
Confidence 456888999999999999999 999987 43 345 8999887778899999999999
Q ss_pred EEccCCCCCCC----CCeEEEEEEEEECCCCCcceeEEEEEEeE
Q psy1047 85 VVLKLLDREIA----PLGYNLTLRAVDKGTPPRETYKATPRNGL 124 (127)
Q Consensus 85 ~~~~~ld~E~~----~~~y~l~v~a~D~g~p~~~st~~i~i~~~ 124 (127)
.+.++||||.. . .|.|.|.|.+ +.|. ++.++.|+++
T Consensus 67 ~~~~~LDRE~~c~~~~-~y~l~v~a~~-~~p~--~~~~V~I~V~ 106 (125)
T 1wyj_A 67 LLKEKLDREELCGSTN-PCILHFQVLL-KSPV--QFIQGEIQLQ 106 (125)
T ss_dssp EESSCCCSTTTCTTCS-SCCBCCEEEE-TTTT--EEECCCEEEC
T ss_pred EECccccchhhcccCC-cEEEEEEEEE-CCCC--eEEEEEEEEE
Confidence 99999999998 8 8999999997 3343 4667777765
No 43
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.46 E-value=5.6e-15 Score=94.83 Aligned_cols=90 Identities=16% Similarity=0.125 Sum_probs=70.6
Q ss_pred CeeEEEEeCCCCCCeEEEEEEEEeCCCCCCC--CcEEEEEEeCCCCCcEEEeCCCCeEEEeeeccccCCCCCCceeeEEE
Q psy1047 9 FVYQATVKENQPIGTLVITLKAADADPPGMN--SKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVV 86 (127)
Q Consensus 9 ~~y~~~v~E~~~~g~~v~~~~a~D~D~~g~n--~~i~y~i~~~~~~~~F~i~~~tg~i~~~~~~~~~~~~~~~~~~~l~~ 86 (127)
..|.+.|+|+.++|+.|+++ |.|+|. +.+ ..++|+|.+++...+|.|++.||.| .+
T Consensus 3 ~~~~~~V~E~~~~Gt~Vg~v-a~D~~~-~~~~~~~~~y~i~~~~~~~~F~Id~~tG~i--------------------~~ 60 (103)
T 1wuz_A 3 SQIHYSIPEEAKHGTFVGRI-AQDLGL-ELTELVPRLFRVASKDRGDLLEVNLQNGIL--------------------FV 60 (103)
T ss_dssp CEEEEEEESSCCTTCBCCCH-HHHHTC-CHHHHTTTTBCCBCSSCSCSEEEETTTTEE--------------------EE
T ss_pred eeEEEEEECCCCCCCEEEEE-EeccCC-CCcccccEEEEEEeCCCccEEEEECCeEEE--------------------EE
Confidence 46888999999999999999 999886 322 4688999877788999999999999 89
Q ss_pred ccCCCCCCC----CCeEEEEEEEEECCCCCcceeEEEEEEeE
Q psy1047 87 LKLLDREIA----PLGYNLTLRAVDKGTPPRETYKATPRNGL 124 (127)
Q Consensus 87 ~~~ld~E~~----~~~y~l~v~a~D~g~p~~~st~~i~i~~~ 124 (127)
.+.||||.. . .|.+.+.+.. +.|. ....+.|+++
T Consensus 61 ~~~LDRE~~~~~~~-~~~~~~~v~~-~~p~--~~~~v~I~V~ 98 (103)
T 1wuz_A 61 NSRIDREELCGRSA-ECSIHLEVIV-DRPL--QVFHVEVEVR 98 (103)
T ss_dssp CSCCSHHHHCSSSS-SCEEEEEEEE-TTTT--EEEEEEEEEE
T ss_pred CCcCccccccCCCC-cEEEEEEEEE-CCCC--EEEEEEEEEE
Confidence 999999974 2 3455555554 3454 3667777775
No 44
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.11 E-value=3.6e-10 Score=82.32 Aligned_cols=94 Identities=13% Similarity=0.092 Sum_probs=70.8
Q ss_pred CeeEEEEeCCCCCCeEEEEEEEEeCCCCCCCCcEEEEEEeCCCCCcEEEeCCCCeEEEeeeccccCCCCCCceeeEEE--
Q psy1047 9 FVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVV-- 86 (127)
Q Consensus 9 ~~y~~~v~E~~~~g~~v~~~~a~D~D~~g~n~~i~y~i~~~~~~~~F~i~~~tg~i~~~~~~~~~~~~~~~~~~~l~~-- 86 (127)
+.|.+.|+|++++|+.+..+.+.|.|..+.|+.++|+|. ++...+|.|++.+|.+ .+
T Consensus 20 P~~~vsV~E~sp~GTvv~~~~~~~~~d~~~n~~i~ysl~-~~~~~~f~id~~tg~~--------------------~l~~ 78 (242)
T 4apx_B 20 PATIVAIDEESRNGTILVDNMLIKGTAGGPDPTIELSLK-DNVDYWVLLDPVKQML--------------------FLNS 78 (242)
T ss_dssp SSEEEEEETTCCTTCEEESCCCBSSCBSSSSCSEEEEEE-SCGGGCEEEETTTTEE--------------------EECC
T ss_pred CeEEEEeeCCCCCCCEEEEEEEecCCCCCCCCEEEEEEe-cCCCceEEECCCCCEE--------------------EEEe
Confidence 457889999999999987765555554388999999997 4567799999999998 44
Q ss_pred -ccCCCCCCCCCeEEEEEEEEECCCC--CcceeEEEEEEeE
Q psy1047 87 -LKLLDREIAPLGYNLTLRAVDKGTP--PRETYKATPRNGL 124 (127)
Q Consensus 87 -~~~ld~E~~~~~y~l~v~a~D~g~p--~~~st~~i~i~~~ 124 (127)
.+.||||... .|.+.+.+.+.+.+ ...++..|+|+++
T Consensus 79 t~~~LDrE~~~-~~~~~~~~v~~~~~~~~~~~~~~V~I~V~ 118 (242)
T 4apx_B 79 TGRVLDRDPPM-NIHSIVVQVQCVNKKVGTVIYHEVRIVVR 118 (242)
T ss_dssp TTSCCCCSTTT-CCCEEEEEEEEEETTTCCEEEEEEEEEEE
T ss_pred cCCceeccCCC-ceEEEEEEEEeECCCCCeEEEEEEEEEEE
Confidence 3689999987 67666666654433 3445667888775
No 45
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=93.60 E-value=1.1 Score=34.98 Aligned_cols=37 Identities=19% Similarity=0.143 Sum_probs=29.5
Q ss_pred EEccCCCCCCCCCeEEEEEEEEECCCCCcceeEEEEEEe
Q psy1047 85 VVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPRNG 123 (127)
Q Consensus 85 ~~~~~ld~E~~~~~y~l~v~a~D~g~p~~~st~~i~i~~ 123 (127)
....|-+ +... .|.|.|+|+|.+.|.++++..+.|.|
T Consensus 400 sft~P~~-~~~~-tl~f~LtVTD~~~p~lTs~~rViVtV 436 (437)
T 2yhg_A 400 NVQIPSN-AGGK-DIHILLTLRDNGSPNLYAYRRVVINV 436 (437)
T ss_dssp EEECCTT-CTTC-EEEEEEEEEECSSSCCEEEEEEEEEE
T ss_pred EEEeCCC-CCCc-EEEEEEEEEeCCCCCccEEeEEEEEe
Confidence 4444544 3455 79999999999999999999888876
No 46
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=93.15 E-value=0.68 Score=31.30 Aligned_cols=78 Identities=17% Similarity=0.282 Sum_probs=55.6
Q ss_pred CCCeeeCCeeEEEEeCCCCCCeEEEEEEEEeCCCCCCCCcEEEEEEeCCCCCcEEEeCCCCeEEEeeeccccCCCCCCce
Q psy1047 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKE 81 (127)
Q Consensus 2 N~P~F~~~~y~~~v~E~~~~g~~v~~~~a~D~D~~g~n~~i~y~i~~~~~~~~F~i~~~tg~i~~~~~~~~~~~~~~~~~ 81 (127)
.-|-|.+..|...++-....|..+++|.-.|=.. +..+.|.. +|+ ..|.|+.. |.|
T Consensus 32 C~pGF~~~~~~~~vp~~l~~g~~lgkV~F~dC~g---~~~~~~~s--sDp-~dFkV~~D-GtV----------------- 87 (159)
T 1op4_A 32 CKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCNR---KRKVQYES--SEP-ADFKVDED-GTV----------------- 87 (159)
T ss_dssp CCCBCCSCEEEECCCCSSCSSCCEEECCCBCCSS---CCCEEEEC--CCS-SEEEEETT-TEE-----------------
T ss_pred ccCCcCcceeEEeccccccCCceeceeecccCCC---CCceeEEc--CCC-CCeEEeCC-CcE-----------------
Confidence 4689999999777888888899999887765542 45677753 233 25999977 888
Q ss_pred eeEEEccCCCCCCCCCeEEEEEEEEEC
Q psy1047 82 YNIVVLKLLDREIAPLGYNLTLRAVDK 108 (127)
Q Consensus 82 ~~l~~~~~ld~E~~~~~y~l~v~a~D~ 108 (127)
++.+++-.-... -.|.|.|.|.
T Consensus 88 ---ya~r~v~L~~~~--~~F~V~a~D~ 109 (159)
T 1op4_A 88 ---YAVRSFPLTAEQ--AKFLIYAQDK 109 (159)
T ss_dssp ---EEESCCSCSSSC--EEEEEEEEET
T ss_pred ---EEecceeecCCC--cEEEEEEEcC
Confidence 777776543333 3677888883
No 47
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=77.06 E-value=10 Score=23.17 Aligned_cols=27 Identities=7% Similarity=-0.021 Sum_probs=19.3
Q ss_pred CCCeEEEEEEEEECCCCC-cceeEEEEEE
Q psy1047 95 APLGYNLTLRAVDKGTPP-RETYKATPRN 122 (127)
Q Consensus 95 ~~~~y~l~v~a~D~g~p~-~~st~~i~i~ 122 (127)
.. .|.|.++|.|...-. .++..+|++.
T Consensus 60 ~G-~htl~a~AtD~~G~~~tS~~v~vtV~ 87 (98)
T 3pe9_A 60 EG-NHEISVIAYDDDDAASTPDSVKIFVK 87 (98)
T ss_dssp SE-EEEEEEEEEETTCCBCCCEEEEEEEE
T ss_pred Cc-cEEEEEEEEECCCCEEeeeEEEEEEC
Confidence 46 899999999976544 4555666654
No 48
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=69.28 E-value=8.7 Score=22.41 Aligned_cols=29 Identities=21% Similarity=0.165 Sum_probs=20.4
Q ss_pred CCCCCCeEEEEEEEEECCCCCcceeEEEEE
Q psy1047 92 REIAPLGYNLTLRAVDKGTPPRETYKATPR 121 (127)
Q Consensus 92 ~E~~~~~y~l~v~a~D~g~p~~~st~~i~i 121 (127)
|.... .|.+++.+.|...-..+.+.+|+|
T Consensus 55 y~~~G-~Y~v~LtVtd~~G~~~t~~~~V~V 83 (85)
T 2y72_A 55 YKKAG-TYNVTLKVTDDKGATATESFTIEI 83 (85)
T ss_dssp CSSCE-EEEEEEEEEETTSCEEEEEEEEEE
T ss_pred cCCCe-EEEEEEEEEECCCCEEEEEEEEEE
Confidence 55667 899999999976654444444444
No 49
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=65.83 E-value=23 Score=22.60 Aligned_cols=46 Identities=17% Similarity=0.162 Sum_probs=25.2
Q ss_pred CCCeeeCCeeEEEEeCCCCCCeEEEEEEEEeCCCCCCCCcEEEEEEeCCC
Q psy1047 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG 51 (127)
Q Consensus 2 N~P~F~~~~y~~~v~E~~~~g~~v~~~~a~D~D~~g~n~~i~y~i~~~~~ 51 (127)
+.+.+.-..-...|.|+. |.....+.-.- +. ...-.+.|....|..
T Consensus 3 ~~~~i~F~~~~y~V~E~~--g~~~v~V~R~g-~~-~~~v~V~y~t~~gTA 48 (137)
T 3ead_A 3 DPIRMYFEPGHYTVMENC--GEFEVRVVRRG-DI-STYASVEYETQDGTA 48 (137)
T ss_dssp --CEEEESSCEEEEEGGG--CEEEEEEEEES-CC-SSCEEEEEEEECSSS
T ss_pred CCEEEEEcCCEEEEECCC--eEEEEEEEEEC-CC-CceEEEEEEeECCCc
Confidence 445555555566788873 55555554432 33 334567888766443
No 50
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=64.72 E-value=8.6 Score=23.45 Aligned_cols=27 Identities=15% Similarity=0.036 Sum_probs=18.7
Q ss_pred CCCCeEEEEEEEEECCCCCcceeEEEEEEe
Q psy1047 94 IAPLGYNLTLRAVDKGTPPRETYKATPRNG 123 (127)
Q Consensus 94 ~~~~~y~l~v~a~D~g~p~~~st~~i~i~~ 123 (127)
... .|.|++.|+|...-. ++.++.|.|
T Consensus 67 ~~G-~y~f~LTVtD~~G~s--~s~~v~VtV 93 (102)
T 2yrl_A 67 QVG-TYVFTLTVKDERNLQ--SQSSVNVIV 93 (102)
T ss_dssp CSS-EEEEEEEEEBTTCCE--EEEEEEEEE
T ss_pred CCe-EEEEEEEEEeCCCCE--EEeEEEEEE
Confidence 456 899999999987544 444444444
No 51
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=57.39 E-value=24 Score=21.78 Aligned_cols=36 Identities=19% Similarity=0.069 Sum_probs=26.0
Q ss_pred EEccCCCCCCCCCeEEEEEEEEECCCCCcceeEEEEE
Q psy1047 85 VVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATPR 121 (127)
Q Consensus 85 ~~~~~ld~E~~~~~y~l~v~a~D~g~p~~~st~~i~i 121 (127)
.+....|..... .|.++-.+.|...-..+.+.+|+|
T Consensus 48 ~V~g~Vdt~k~G-~Y~VtY~VtDs~Gn~~t~trtVtV 83 (103)
T 2kpn_A 48 KVDGEVDTTKAG-TYVLTYTVTDSKGHEVTAKQTVTV 83 (103)
T ss_dssp EEESCCCSSSCE-EEEEEEEEECTTSCEEEEEEEEEE
T ss_pred EEeCcccCCCce-EEEEEEEEEcCCCCEEEEEEEEEE
Confidence 445667888888 999999999976555555555554
No 52
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=55.95 E-value=60 Score=26.04 Aligned_cols=30 Identities=13% Similarity=0.167 Sum_probs=20.7
Q ss_pred CCCCeEEEEEEEEECCCCCcceeEEEEEEeE
Q psy1047 94 IAPLGYNLTLRAVDKGTPPRETYKATPRNGL 124 (127)
Q Consensus 94 ~~~~~y~l~v~a~D~g~p~~~st~~i~i~~~ 124 (127)
... .|+|.|+|++....-.....++.|+|+
T Consensus 718 ~pG-~Y~f~V~a~~~~g~w~~~~~~l~I~I~ 747 (758)
T 3ott_A 718 SYG-NYQLIISKLERDGQPSNRPHILNIRIL 747 (758)
T ss_dssp CSE-EEEEEEEEBCTTSCBCSSCEEEEEEEC
T ss_pred CCc-cEEEEEEEeCCCCCccCccEEEEEEEC
Confidence 345 799999999976543334456777765
No 53
>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A
Probab=51.96 E-value=26 Score=20.43 Aligned_cols=33 Identities=21% Similarity=0.213 Sum_probs=22.1
Q ss_pred CCCCCeEEEEEEEEECCCC-CcceeEEEEEEeEeC
Q psy1047 93 EIAPLGYNLTLRAVDKGTP-PRETYKATPRNGLTC 126 (127)
Q Consensus 93 E~~~~~y~l~v~a~D~g~p-~~~st~~i~i~~~~~ 126 (127)
+... .|.|.|.|.+.+.. ......-+.+.+-||
T Consensus 68 ~p~t-~Y~~~V~A~~~~~~~~~~~s~p~~~~~~T~ 101 (101)
T 3k2m_C 68 SPGV-DYTITVYAWGEDSAGYMFMYSPISINYRTC 101 (101)
T ss_dssp CTTC-EEEEEEEEEEECTTSCEEECBCEEEEEECC
T ss_pred CCCC-EEEEEEEEEeCCccceeecCCCEEEEeecC
Confidence 4566 89999999998765 223334455666666
No 54
>1u2c_A Dystroglycan; IG-like domain, S6 like fold, protein binding; 2.30A {Mus musculus} SCOP: b.1.6.2 d.272.1.1
Probab=45.90 E-value=80 Score=22.62 Aligned_cols=44 Identities=11% Similarity=-0.026 Sum_probs=27.1
Q ss_pred EEEEEEe--C-CCCCcEEEeCCCCeEEEeeeccccCCCCCCceeeEEEccCCCCCCCCCeEEEEEEEEEC
Q psy1047 42 ISYSVRG--G-DGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK 108 (127)
Q Consensus 42 i~y~i~~--~-~~~~~F~i~~~tg~i~~~~~~~~~~~~~~~~~~~l~~~~~ld~E~~~~~y~l~v~a~D~ 108 (127)
.+|++.. | ....|+..|+.++.+ ..-|++.+.- .|.+.|.|.+.
T Consensus 33 ~~y~vt~a~g~~LPsWL~fd~~t~Tf---------------------sG~P~~~D~G--~~~i~VtA~~~ 79 (246)
T 1u2c_A 33 EIIKVSAAGKEALPSWLHWDPHSHIL---------------------EGLPLDTDKG--VHYISVSAARL 79 (246)
T ss_dssp EEEEEEETTSSSCCTTEEEETTTTEE---------------------EECCCGGGCE--EEEEEEEEEEE
T ss_pred cEEEEEecCCCCCCcceEEcCCCCeE---------------------EeccCCCCcc--eEEEEEEEeec
Confidence 3555543 2 236899999998864 4455554443 47777777644
No 55
>3gin_A Sodium/calcium exchanger 1; CBD1, CBD2, NCX, calcium binding domain 1, antiport, calcium transport, calmodulin-binding, cell membrane; 2.40A {Canis lupus familiaris} PDB: 2dpk_A* 2fws_A
Probab=41.82 E-value=73 Score=20.98 Aligned_cols=89 Identities=16% Similarity=0.090 Sum_probs=41.5
Q ss_pred eeeCCeeEEEEeCCCCCCeEEEEEEEEeCCCCCCCCcEEEEEEeCCCCCcEEEeCCCCeEEEeeeccccCCCCCCceeeE
Q psy1047 5 VFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDGLGYFTIDNEGPLNHFRIVPTKIDPGTKKKEYNI 84 (127)
Q Consensus 5 ~F~~~~y~~~v~E~~~~g~~v~~~~a~D~D~~g~n~~i~y~i~~~~~~~~F~i~~~tg~i~~~~~~~~~~~~~~~~~~~l 84 (127)
.|.-..-...|.|+. |..-+++.-...+. +..-.|.|....|....--......|.|++. +|.-.....|
T Consensus 24 ~i~F~~~~y~V~E~~--G~v~vtV~R~~G~~-~~~v~V~y~T~dGTA~~g~Dy~~~~gtl~F~-------~Get~k~i~V 93 (160)
T 3gin_A 24 KIFFEQGTYQCLENC--GTVALTIIRRGGDL-TNTVFVDFRTEDGTANAGSDYEFTEGTVVFK-------PGETQKEIRV 93 (160)
T ss_dssp EEEESCSEEEEETTS--SEEEEEEEEESSCT-TSCEEEEEEEEESSSCBTTTBCCCEEEEEEC-------TTCCEEEEEE
T ss_pred EEEEeCCEEEEEcCc--EEEEEEEEEccCCC-CcEEEEEEEEECCcccCCCCccccceEEEEc-------CCcEEEEEEE
Confidence 344444445688873 55555554443443 2334678987765432111111234666443 2222233344
Q ss_pred EEccCCCCCCCCCeEEEEEE
Q psy1047 85 VVLKLLDREIAPLGYNLTLR 104 (127)
Q Consensus 85 ~~~~~ld~E~~~~~y~l~v~ 104 (127)
.+...--+|... .|.+.+.
T Consensus 94 ~IidD~~~E~~E-tF~v~Ls 112 (160)
T 3gin_A 94 GIIDDDIFEEDK-NFLVHLS 112 (160)
T ss_dssp EBCCCSCCCCCE-EEEEEEE
T ss_pred EEECCCCccCce-EEEEEEC
Confidence 444333345555 4555554
No 56
>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=36.48 E-value=56 Score=19.07 Aligned_cols=27 Identities=15% Similarity=-0.023 Sum_probs=18.5
Q ss_pred CCCCCCeEEEEEEEEECCCCCcceeEEE
Q psy1047 92 REIAPLGYNLTLRAVDKGTPPRETYKAT 119 (127)
Q Consensus 92 ~E~~~~~y~l~v~a~D~g~p~~~st~~i 119 (127)
.+... .|.+.|.|.+....+...+.++
T Consensus 66 L~p~t-~Y~~~V~A~~~~g~s~~~~~~~ 92 (105)
T 2cum_A 66 LFPST-SYNARLQAMWGQSLLPPVSTSF 92 (105)
T ss_dssp CCTTC-EEEEEEEEEBTTBCCCCEEEEE
T ss_pred CCCCC-EEEEEEEEEeCCcccCCEEEEE
Confidence 35566 8999999998765554444433
No 57
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=35.32 E-value=1e+02 Score=20.67 Aligned_cols=28 Identities=7% Similarity=0.025 Sum_probs=19.8
Q ss_pred CCCCeEEEEEEEEEC-CCCCcceeEEEEEE
Q psy1047 94 IAPLGYNLTLRAVDK-GTPPRETYKATPRN 122 (127)
Q Consensus 94 ~~~~~y~l~v~a~D~-g~p~~~st~~i~i~ 122 (127)
... .|.|+++|.|. |+-..++..+|++.
T Consensus 151 ~~G-~~tl~a~A~D~aGn~s~s~~vtvtv~ 179 (190)
T 3pdd_A 151 VEG-NHEISVIAYDDDDAASTPDSVKIFVK 179 (190)
T ss_dssp CSE-EEEEEEEEEETTCCBCCCEEEEEEEB
T ss_pred CCe-eEEEEEEEEECCCCEEecceEEEEEC
Confidence 456 89999999996 45555555666553
No 58
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=33.90 E-value=1.1e+02 Score=22.16 Aligned_cols=45 Identities=18% Similarity=0.162 Sum_probs=23.8
Q ss_pred CCCeeeCCeeEEEEeCCCCCCeEEEEEEEEeCCCCCCCCcEEEEEEeCC
Q psy1047 2 NAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50 (127)
Q Consensus 2 N~P~F~~~~y~~~v~E~~~~g~~v~~~~a~D~D~~g~n~~i~y~i~~~~ 50 (127)
++..|.-..-...|.|+. |..-..+.-.. +. .....|.|....|.
T Consensus 8 ~~g~i~F~~~~y~V~E~~--g~v~vtV~R~g-~~-~~~vtV~y~T~~GT 52 (298)
T 3rb5_A 8 DPIRMYFEPGHYTVMENC--GEFEVRVVRRG-DI-STYASVEYETQDGT 52 (298)
T ss_dssp ---CEEESSSEEEEETTS--CCEECCEEECS-CC-SSCEEEEEEEEESS
T ss_pred CceEEEEeCCEEEEecCc--eEEEEEEEEEC-CC-CccEEEEEEeeCCc
Confidence 345565555566889974 44444443332 33 23356788776644
No 59
>2xip_A Tumour protein P73; phosphoprotein, tumor suppressor, transcription, metal-bindi nucleus, cell cycle, transcription regulation; HET: TAM; 1.82A {Homo sapiens} PDB: 2xwc_A* 4a63_A 3vd0_A* 3vd1_A* 3vd2_A* 3qyn_A 3qym_A 3us0_A 3us1_A 3us2_A
Probab=32.23 E-value=43 Score=23.36 Aligned_cols=28 Identities=7% Similarity=0.037 Sum_probs=20.6
Q ss_pred EEEEEEEEECCCCCcceeEEEEEEeEeCC
Q psy1047 99 YNLTLRAVDKGTPPRETYKATPRNGLTCP 127 (127)
Q Consensus 99 y~l~v~a~D~g~p~~~st~~i~i~~~~~~ 127 (127)
..+.++.-|.+. ..-+...+.++||+||
T Consensus 161 i~lifTLE~~~G-~vLGR~~~~vRICaCP 188 (208)
T 2xip_A 161 ILIIITLEMRDG-QVLGRRSFEGRICACP 188 (208)
T ss_dssp EEEEEEEECTTS-CEEEEEEEEEEECSCH
T ss_pred EEEEEEEECCCC-CEeeeeEEeeEEeCCC
Confidence 555666666433 3778899999999998
No 60
>2e7m_A Protein KIAA0319; PKD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.55 E-value=98 Score=19.43 Aligned_cols=26 Identities=4% Similarity=-0.173 Sum_probs=17.7
Q ss_pred CCCeEEEEEEEEECCCCCcceeEEEEEEeE
Q psy1047 95 APLGYNLTLRAVDKGTPPRETYKATPRNGL 124 (127)
Q Consensus 95 ~~~~y~l~v~a~D~g~p~~~st~~i~i~~~ 124 (127)
.. .|.|.|.++|... .+...+.|-|+
T Consensus 79 eG-~Y~FqltVtd~~~---~ge~~vnVTV~ 104 (113)
T 2e7m_A 79 VG-LYVFKVTVSSENA---FGEGFVNVTVK 104 (113)
T ss_dssp SE-EEEECCEEEETTE---EEECCEEEEEE
T ss_pred cE-EEEEEEEEECCCC---CccceEEEEEc
Confidence 46 7999999999776 44444444444
No 61
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=31.44 E-value=1.5e+02 Score=21.52 Aligned_cols=16 Identities=19% Similarity=0.092 Sum_probs=6.3
Q ss_pred CCeeeCCeeEEEEeCC
Q psy1047 3 APVFSDFVYQATVKEN 18 (127)
Q Consensus 3 ~P~F~~~~y~~~v~E~ 18 (127)
+|+|.-..-.+.|.|+
T Consensus 122 ~g~~~f~~~~~~V~E~ 137 (298)
T 3rb5_A 122 AGIFAFTDSVFEITES 137 (298)
T ss_dssp CCEEECSCSEEEECTT
T ss_pred ccccccccccEEeecC
Confidence 3443333333344444
No 62
>2wql_A Major allergen DAU C 1; pathogenesis-related protein, plant defense; HET: P4C; 2.70A {Daucus carota} PDB: 2bk0_A
Probab=28.77 E-value=1.2e+02 Score=19.63 Aligned_cols=35 Identities=26% Similarity=0.384 Sum_probs=23.6
Q ss_pred EEEEeCCCCCCeEEEEEEEEeCCCCCCCCcEEEEEEeCC
Q psy1047 12 QATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD 50 (127)
Q Consensus 12 ~~~v~E~~~~g~~v~~~~a~D~D~~g~n~~i~y~i~~~~ 50 (127)
.+.+.+..+.....-++.+.|.+. ..+.|+++.|+
T Consensus 55 ~~t~~~g~~~~~~kErle~iD~~~----~~~~y~iieGd 89 (154)
T 2wql_A 55 IITLPEGSPITTMTVRTDAVNKEA----LSYDSTVIDGD 89 (154)
T ss_dssp EEECCTTCSCCEEEEEEEEEETTT----TEEEEEEEESG
T ss_pred EEEEcCCCCceEEEEEEEEEehhh----CEEEEEEEecc
Confidence 344445555555667777888774 67899998876
No 63
>2yro_A Galectin-8; GAL-BIND lectin, sugar binding, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.69 E-value=1.2e+02 Score=19.64 Aligned_cols=55 Identities=11% Similarity=0.132 Sum_probs=34.6
Q ss_pred CCCeeeCC----eeEEEEeCCCCCCeEEEEEEEEeCCCCCCCCcEEEEEEeCC-CCCcEEEeCC
Q psy1047 2 NAPVFSDF----VYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGD-GLGYFTIDNE 60 (127)
Q Consensus 2 N~P~F~~~----~y~~~v~E~~~~g~~v~~~~a~D~D~~g~n~~i~y~i~~~~-~~~~F~i~~~ 60 (127)
++|.|... .|...+++...+|..|...-....+. .++.-.+..+. .+-.|++++.
T Consensus 6 ~~~~~~~p~~~vPf~~~ip~gl~~G~~i~I~G~v~~~~----~rF~Inl~~g~~~dialHfnpR 65 (155)
T 2yro_A 6 SGPKSGTPQLSLPFAARLNTPMGPGRTVVVKGEVNANA----KSFNVDLLAGKSKDIALHLNPR 65 (155)
T ss_dssp SCCCCCSCCCCSSEEEECSSCCCTTCEEEEEEEECTTC----CCEEEEEEETTTTEEEEEEECC
T ss_pred CCccCCCCccccCEeeecCCCCccCCEEEEEEEECCCC----CEEEEEEecCCCCCEEEEEEEE
Confidence 45666544 79999999999998886654444443 23444455544 3455666664
No 64
>3q01_A Cellular tumor antigen P53; beta sandwich, multidomain, oligomerization, TP53, TUMO suppressor, dimer, DNA binding, antitumor protein; 2.10A {Homo sapiens} PDB: 3q05_A* 3ts8_A 3q06_A* 1a1u_A
Probab=27.61 E-value=66 Score=22.85 Aligned_cols=28 Identities=11% Similarity=0.055 Sum_probs=20.3
Q ss_pred EEEEEEEEECCCCCcceeEEEEEEeEeCC
Q psy1047 99 YNLTLRAVDKGTPPRETYKATPRNGLTCP 127 (127)
Q Consensus 99 y~l~v~a~D~g~p~~~st~~i~i~~~~~~ 127 (127)
..+.++.-|... ..-+...+.++||+||
T Consensus 158 i~lIfTLE~~~G-~vLGR~~~evRICaCP 185 (233)
T 3q01_A 158 ILVIITLEDSSG-NLLGRDSFEVRVCACP 185 (233)
T ss_dssp EEEEEEEECTTC-CEEEEEEEEEEECSCH
T ss_pred eEEEEEEECCCC-CEeeeeEEEEEEeCCC
Confidence 455556665432 4678888999999998
No 65
>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}
Probab=26.27 E-value=97 Score=17.70 Aligned_cols=25 Identities=12% Similarity=0.058 Sum_probs=17.3
Q ss_pred CCCCCCeEEEEEEEEECCCCCcceeE
Q psy1047 92 REIAPLGYNLTLRAVDKGTPPRETYK 117 (127)
Q Consensus 92 ~E~~~~~y~l~v~a~D~g~p~~~st~ 117 (127)
.+... .|.|.|.|.+....+..++.
T Consensus 62 L~p~t-~Y~~~V~A~n~~g~s~p~~~ 86 (100)
T 3b83_A 62 LEPNT-TYEIRIVARNGQQYSPPVST 86 (100)
T ss_dssp CCTTC-EEEEEEEEEETTEECCCEEE
T ss_pred CCCCC-EEEEEEEEEeCCCCCCCEEE
Confidence 34566 89999999997654444443
No 66
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=26.18 E-value=2.5e+02 Score=22.49 Aligned_cols=29 Identities=14% Similarity=0.017 Sum_probs=20.0
Q ss_pred CCCeEEEEEEEEECCCCCcceeEEEEEEeE
Q psy1047 95 APLGYNLTLRAVDKGTPPRETYKATPRNGL 124 (127)
Q Consensus 95 ~~~~y~l~v~a~D~g~p~~~st~~i~i~~~ 124 (127)
.. .|+|.|+|++.+..-.....++.|.|+
T Consensus 753 pG-~Y~f~V~a~n~~g~w~~~~~~l~i~I~ 781 (795)
T 4a2l_A 753 QG-TYQFLVKAANSDGKWNPIPTALEIIVL 781 (795)
T ss_dssp SE-EEEEEEEEECTTSCBCSSCEEEEEEEC
T ss_pred CC-eEEEEEEEECCCCccCCCceEEEEEEE
Confidence 45 799999999976543333455666665
No 67
>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.16 E-value=59 Score=18.88 Aligned_cols=21 Identities=10% Similarity=0.240 Sum_probs=14.9
Q ss_pred CCCCCeEEEEEEEEECCCCCcc
Q psy1047 93 EIAPLGYNLTLRAVDKGTPPRE 114 (127)
Q Consensus 93 E~~~~~y~l~v~a~D~g~p~~~ 114 (127)
+... .|.|.|.|.+....+..
T Consensus 69 ~p~t-~Y~~~V~A~~~~~~s~p 89 (104)
T 2dkm_A 69 EPGR-DYEVSVQSLRGPEGSEA 89 (104)
T ss_dssp CTTC-CEEEEEEEECSSSBCCC
T ss_pred CCCC-EEEEEEEEECCCCCCCC
Confidence 3455 79999999987654433
No 68
>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=22.65 E-value=1.1e+02 Score=17.01 Aligned_cols=25 Identities=8% Similarity=0.166 Sum_probs=17.4
Q ss_pred CCCCCeEEEEEEEEECCCCCcceeEE
Q psy1047 93 EIAPLGYNLTLRAVDKGTPPRETYKA 118 (127)
Q Consensus 93 E~~~~~y~l~v~a~D~g~p~~~st~~ 118 (127)
+... .|.+.|.|.+.+..+..++..
T Consensus 63 ~p~t-~Y~~~V~A~~~~g~s~p~~~~ 87 (94)
T 1j8k_A 63 RPGS-EYTVSVVALHDDMESQPLIGT 87 (94)
T ss_dssp CCCS-EEEEEEEECSSSCCCCCEEEE
T ss_pred CCCC-EEEEEEEEEcCCCcCCCEEeE
Confidence 4556 899999999877655444433
No 69
>3e9t_A Na/Ca exchange protein; CBD1, CALX, membrane, transmembrane, membrane protein; 1.60A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=22.48 E-value=1.4e+02 Score=18.14 Aligned_cols=40 Identities=23% Similarity=0.308 Sum_probs=21.6
Q ss_pred eeCCeeEEEEeCCCCCCeEEEEEEEEeCCCCCCCCcEEEEEEeCCC
Q psy1047 6 FSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGGDG 51 (127)
Q Consensus 6 F~~~~y~~~v~E~~~~g~~v~~~~a~D~D~~g~n~~i~y~i~~~~~ 51 (127)
|.+.. ..|.|+. |..-.++.-.- +. ...-.|.|....|..
T Consensus 7 F~~~~--y~V~E~~--g~~~v~V~R~g-~~-~~~v~V~y~t~~gTA 46 (114)
T 3e9t_A 7 FEPGH--YTVMENC--GEFEVRVVRRG-DI-STYASVEYETQDGTA 46 (114)
T ss_dssp ESSSE--EEEETTC--CEEEEEEEEEE-CC-SSCEEEEEEEECSSS
T ss_pred EeCCE--EEEEcCC--eEEEEEEEEEC-CC-CeeEEEEEEeECCcc
Confidence 44444 4578873 55555554443 33 234567888765443
No 70
>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.88 E-value=1e+02 Score=18.53 Aligned_cols=19 Identities=11% Similarity=0.326 Sum_probs=14.9
Q ss_pred CCCCCeEEEEEEEEECCCCC
Q psy1047 93 EIAPLGYNLTLRAVDKGTPP 112 (127)
Q Consensus 93 E~~~~~y~l~v~a~D~g~p~ 112 (127)
+... .|.|.|.|.+....+
T Consensus 88 ~p~t-~Y~frV~A~N~~G~~ 106 (127)
T 2dmk_A 88 QSGT-RYIFIVKAINQAGSR 106 (127)
T ss_dssp CSSC-EEEEEEEEEESSCEE
T ss_pred CCCC-EEEEEEEEEeCCCCC
Confidence 4556 899999999976553
No 71
>2c4x_A Endoglucanase, ctcel9D-CEL44A; cellulase ctcel9D-CEL44A, PKD domain, CBM44, carbohydrate BI module, beta-sandwich proteins, cellulosome; 2.0A {Clostridium thermocellum} PDB: 2c26_A
Probab=21.85 E-value=1.1e+02 Score=21.91 Aligned_cols=31 Identities=10% Similarity=0.028 Sum_probs=21.0
Q ss_pred CCCCCCCeEEEEEEEEECCCCCcceeEEEEEEeE
Q psy1047 91 DREIAPLGYNLTLRAVDKGTPPRETYKATPRNGL 124 (127)
Q Consensus 91 d~E~~~~~y~l~v~a~D~g~p~~~st~~i~i~~~ 124 (127)
-|.... .|.+++.|+|...-. ++.+..|.|.
T Consensus 64 tY~~~G-tYtVtLTVtD~~G~s--~t~t~~ItV~ 94 (260)
T 2c4x_A 64 KYKNPG-TYKVKLIVTDNQGAS--SSFTATIKVT 94 (260)
T ss_dssp CCSSCE-EEEEEEEEEETTSCE--EEEEEEEEEB
T ss_pred EeCCCE-EEEEEEEEEeCCCCe--EEEEEEEEEC
Confidence 456677 899999999976543 3444555543
No 72
>1jh4_B PAIP1, polyadenylate-binding protein-interacting protein-1; all-helical domain, protein-peptide complex, RNA binding protein; NMR {Homo sapiens} PDB: 3ntw_B
Probab=21.46 E-value=26 Score=16.06 Aligned_cols=11 Identities=45% Similarity=0.552 Sum_probs=9.0
Q ss_pred CCCeeeCCeeE
Q psy1047 2 NAPVFSDFVYQ 12 (127)
Q Consensus 2 N~P~F~~~~y~ 12 (127)
|+|+|-.+.|.
T Consensus 9 ~ApeF~Psgys 19 (26)
T 1jh4_B 9 NAPEFYPSGYS 19 (26)
T ss_dssp CCSCCCCTTCC
T ss_pred CCceeccCccc
Confidence 78999888776
No 73
>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic}
Probab=20.60 E-value=1.3e+02 Score=17.14 Aligned_cols=23 Identities=13% Similarity=0.244 Sum_probs=16.4
Q ss_pred CCCCCeEEEEEEEEECCCCCccee
Q psy1047 93 EIAPLGYNLTLRAVDKGTPPRETY 116 (127)
Q Consensus 93 E~~~~~y~l~v~a~D~g~p~~~st 116 (127)
+... .|.|.|.|.+.+..+...+
T Consensus 63 ~P~t-~Y~~~V~A~~~~g~S~p~~ 85 (98)
T 3tes_A 63 KPGT-EYTVSIYGVKGGHRSNPLS 85 (98)
T ss_dssp CTTC-EEEEEEEEEETTEEBCCEE
T ss_pred CCCC-EEEEEEEEEeCCcccCCEE
Confidence 4556 8999999999875444433
No 74
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.36 E-value=1.4e+02 Score=17.25 Aligned_cols=24 Identities=21% Similarity=0.088 Sum_probs=16.8
Q ss_pred CCCCCeEEEEEEEEECCCCCcceeE
Q psy1047 93 EIAPLGYNLTLRAVDKGTPPRETYK 117 (127)
Q Consensus 93 E~~~~~y~l~v~a~D~g~p~~~st~ 117 (127)
+... .|.|.|.|.+.......+..
T Consensus 81 ~p~t-~Y~~~V~A~n~~G~g~~S~~ 104 (118)
T 2yrz_A 81 LPNH-SYVFRVRAQSQEGWGREREG 104 (118)
T ss_dssp CTTC-EEEEEEEEEESSCEEEEEEE
T ss_pred CCCC-EEEEEEEEEcCCcCCCCcCC
Confidence 4556 89999999997655444443
No 75
>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene}
Probab=20.20 E-value=96 Score=17.56 Aligned_cols=29 Identities=17% Similarity=0.096 Sum_probs=18.4
Q ss_pred CCCCCeEEEEEEEEECCCCCcceeEEEEEE
Q psy1047 93 EIAPLGYNLTLRAVDKGTPPRETYKATPRN 122 (127)
Q Consensus 93 E~~~~~y~l~v~a~D~g~p~~~st~~i~i~ 122 (127)
+... .|.+.|.|.+.......+...++++
T Consensus 66 ~p~t-~Y~v~V~A~~~~G~gp~ss~p~~~~ 94 (97)
T 3qht_C 66 SPGV-DYTITVYAYYSYYDLYYSYSPSSIN 94 (97)
T ss_dssp CTTC-EEEEEEEEEEEETTEEEECSCEEEE
T ss_pred CCCC-EEEEEEEEEeCCccCCCCCCCEEEe
Confidence 4566 8999999998755443333334443
No 76
>3us9_A Sodium/calcium exchanger 1; beta-sandwich, calcium binding protein, intracellular, metal protein; 2.68A {Canis lupus familiaris} PDB: 2klt_A
Probab=20.09 E-value=2.5e+02 Score=20.27 Aligned_cols=45 Identities=20% Similarity=0.225 Sum_probs=21.2
Q ss_pred CCCCeeeCCeeEEEEeCCCCCCeEEEEEEEEeCCCCCCCCcEEEEEEeC
Q psy1047 1 MNAPVFSDFVYQATVKENQPIGTLVITLKAADADPPGMNSKISYSVRGG 49 (127)
Q Consensus 1 ~N~P~F~~~~y~~~v~E~~~~g~~v~~~~a~D~D~~g~n~~i~y~i~~~ 49 (127)
|++|+|.-..-...|.|+ .|...+.+.-+-. . ...-.+.|....|
T Consensus 138 D~agv~sf~~~~~~V~E~--~G~~~v~V~Rs~~-~-~g~VtV~y~T~~G 182 (295)
T 3us9_A 138 DHAGIFTFEEPVTHVSES--IGIMEVKVLRTSG-A-RGNVIVPYKTIEG 182 (295)
T ss_dssp CCCCEEEESCSEEEEESC--SSEEEEEEEEESC-C-CSCEEEEEEEECC
T ss_pred ccccccccCCCeEEEecC--CCeEEEEEEEEcC-C-CccEEEEEEecCC
Confidence 345665544445567776 3444444433322 1 1223455665543
Done!