BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10473
(124 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|340709297|ref|XP_003393247.1| PREDICTED: cysteine protease ATG4B-like isoform 2 [Bombus
terrestris]
Length = 386
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 71/131 (54%), Gaps = 25/131 (19%)
Query: 3 TGHIGVYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAE 62
+G +G K ++ E ++D+TYHC +SR+ I +DPS+A+CF C TE DF SLC I+ E
Sbjct: 272 SGSVG--KKLEEEEIEMDATYHCKSSSRIPITGIDPSVALCFFCATEKDFKSLCKSIQEE 329
Query: 63 L-RPEQQPLFELIEDPIEDWTPTQPRPSNLGGTSS--------PSCSSMRRQPRRVSGVG 113
L PE+QPL EL + + W+P + S TS+ P C +
Sbjct: 330 LITPEKQPLLELCAERLAQWSPVEDIASEAIATSTFVDFEHIDPQCDT------------ 377
Query: 114 EGSDDDFEFLG 124
SD+DFE LG
Sbjct: 378 --SDEDFELLG 386
>gi|340709295|ref|XP_003393246.1| PREDICTED: cysteine protease ATG4B-like isoform 1 [Bombus
terrestris]
Length = 383
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 71/131 (54%), Gaps = 25/131 (19%)
Query: 3 TGHIGVYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAE 62
+G +G K ++ E ++D+TYHC +SR+ I +DPS+A+CF C TE DF SLC I+ E
Sbjct: 269 SGSVG--KKLEEEEIEMDATYHCKSSSRIPITGIDPSVALCFFCATEKDFKSLCKSIQEE 326
Query: 63 L-RPEQQPLFELIEDPIEDWTPTQPRPSNLGGTSS--------PSCSSMRRQPRRVSGVG 113
L PE+QPL EL + + W+P + S TS+ P C +
Sbjct: 327 LITPEKQPLLELCAERLAQWSPVEDIASEAIATSTFVDFEHIDPQCDT------------ 374
Query: 114 EGSDDDFEFLG 124
SD+DFE LG
Sbjct: 375 --SDEDFELLG 383
>gi|322795203|gb|EFZ18025.1| hypothetical protein SINV_08608 [Solenopsis invicta]
Length = 403
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 67/119 (56%), Gaps = 9/119 (7%)
Query: 8 VYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAEL-RPE 66
V DK + E ++D TYHC ASR+ I MDPS+A+CF C TE +F SLC ++ EL PE
Sbjct: 292 VEDKISEEEIEMDITYHCKSASRIPITGMDPSVALCFFCATEKEFMSLCKSMQEELILPE 351
Query: 67 QQPLFELIEDPIEDWTPTQPRPSN-LGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFLG 124
+QPLFEL + + W+ S + +S + RQ + SD+DFE LG
Sbjct: 352 KQPLFELCTERLAHWSSADDAVSEAIAASSFVDFEHIERQY-------DTSDEDFELLG 403
>gi|91083193|ref|XP_972923.1| PREDICTED: similar to Autophagy-specific protein, putative
[Tribolium castaneum]
gi|270006970|gb|EFA03418.1| hypothetical protein TcasGA2_TC013405 [Tribolium castaneum]
Length = 366
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 19 LDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAEL-RPEQQPLFELIEDP 77
LDSTYHC ASR++IL MDPS+AVCF C TE +F LC I+ +L PE+QPLFE+ +
Sbjct: 275 LDSTYHCKYASRINILSMDPSVAVCFFCNTEGEFNDLCHSIKKDLIEPEKQPLFEITYEK 334
Query: 78 IEDWTPT 84
+ WTPT
Sbjct: 335 PKQWTPT 341
>gi|350425106|ref|XP_003494013.1| PREDICTED: cysteine protease ATG4B-like [Bombus impatiens]
Length = 383
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 70/123 (56%), Gaps = 9/123 (7%)
Query: 3 TGHIGVYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAE 62
+G +G K ++ E ++D+TYHC +SR+ I +DPS+A+CF C TE DF SLC I+ E
Sbjct: 269 SGSVG--KKLEEEEIEMDATYHCKSSSRIPITGIDPSVALCFFCATEKDFKSLCKSIQEE 326
Query: 63 L-RPEQQPLFELIEDPIEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFE 121
L PE+QPL EL + + W+P + S TS+ + + SD+DFE
Sbjct: 327 LITPEKQPLLELCAERLAQWSPVEDIASEAIATST------FVDFEHIDPQYDTSDEDFE 380
Query: 122 FLG 124
LG
Sbjct: 381 LLG 383
>gi|383861144|ref|XP_003706046.1| PREDICTED: cysteine protease ATG4B-like [Megachile rotundata]
Length = 384
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 68/115 (59%), Gaps = 6/115 (5%)
Query: 11 KEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAEL-RPEQQP 69
K ++ E ++D+TYHC ASR+ I +DPS+A+CF C TE DF SLC I+ EL PE+QP
Sbjct: 275 KLEEEEIEMDATYHCKFASRIPITGIDPSVALCFFCATERDFKSLCKVIQEELITPEKQP 334
Query: 70 LFELIEDPIEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFLG 124
L EL + + W+P + ++ ++PS + + SD+DFE LG
Sbjct: 335 LLELCAERLAQWSPAEDVAAS-EAIAAPSFVDF----EHIDPQYDTSDEDFELLG 384
>gi|357620505|gb|EHJ72670.1| putative Autophagy-specific protein [Danaus plexippus]
Length = 383
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 49/77 (63%)
Query: 8 VYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQ 67
V +K D +K++D TYHC ASR+ IL MDPS+AVCFLC+T +DF LC I L E
Sbjct: 275 VENKLTDEQKEMDCTYHCKYASRIPILSMDPSVAVCFLCRTRSDFDELCELIEKRLMQES 334
Query: 68 QPLFELIEDPIEDWTPT 84
QPLFE+ E W P
Sbjct: 335 QPLFEICEKRPSHWGPN 351
>gi|332029697|gb|EGI69576.1| Cysteine protease ATG4B [Acromyrmex echinatior]
Length = 383
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 67/119 (56%), Gaps = 9/119 (7%)
Query: 8 VYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAEL-RPE 66
+ DK + E ++D +YHC ASR+ I MDPS+A+CF C TE +F SLC ++ EL PE
Sbjct: 272 IEDKISEEEIEMDISYHCKSASRIPITGMDPSVALCFFCATEKEFKSLCKSMQEELILPE 331
Query: 67 QQPLFELIEDPIEDWTPTQPRPSN-LGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFLG 124
+QPLFEL + + W+ S + +S + RQ + SD+DFE LG
Sbjct: 332 KQPLFELCTERLAHWSSADDAVSEAVAASSFVDFEHIERQY-------DTSDEDFELLG 383
>gi|332375955|gb|AEE63118.1| unknown [Dendroctonus ponderosae]
Length = 370
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 8 VYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAEL-RPE 66
V +K+ EK +D +YHC ASR+ +L MDPS+AVCFLC++E DF LC I+ +L + E
Sbjct: 272 VGNKDTSEEKDVDLSYHCKHASRMSMLGMDPSVAVCFLCRSEADFNDLCQNIKDQLIKTE 331
Query: 67 QQPLFELIEDPIEDWTPTQPRPSNLGGTSSPS 98
QPLFE+ + E+W T NL G S S
Sbjct: 332 SQPLFEVSFERTEEWLST-VEELNLSGLSDQS 362
>gi|209969827|ref|NP_001123274.2| autophagy-specific gene 4 [Nasonia vitripennis]
Length = 405
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 65/116 (56%), Gaps = 17/116 (14%)
Query: 11 KEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAEL-RPEQQP 69
K D+E ++D+TYHC ASR+ I MDPS+A+CF C TE DF SLC ++ EL E+QP
Sbjct: 305 KSDDNEAEVDATYHCKIASRIPITGMDPSVALCFFCATEKDFMSLCRLMQDELIGNEKQP 364
Query: 70 LFELIEDPIEDWTPTQPRPSN-LGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFLG 124
LFEL ++ W+P + + LG T+S SD+ FE LG
Sbjct: 365 LFELCQERPASWSPAEDVAAEALGATAS---------------TWPASDEGFELLG 405
>gi|406042044|gb|AFS31124.1| autophagy related protein Atg4-like protein, partial [Spodoptera
litura]
Length = 365
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 61/116 (52%), Gaps = 7/116 (6%)
Query: 8 VYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQ 67
V K D +K++D +YHC ASR+ +L MDPS+AVCFLC+T+ DF LC+ I +L E
Sbjct: 257 VETKTTDEQKEMDWSYHCKYASRIPMLAMDPSVAVCFLCRTKRDFEELCATIETKLMCES 316
Query: 68 QPLFELIEDPIEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
QPLFE E W P T + RQ + SDD+FE L
Sbjct: 317 QPLFETCEKRPAHWGPMTSDIDLQNTTLFTEFEDVDRQ-------FDDSDDEFEIL 365
>gi|242007959|ref|XP_002424782.1| Cysteine protease ATG4A, putative [Pediculus humanus corporis]
gi|212508305|gb|EEB12044.1| Cysteine protease ATG4A, putative [Pediculus humanus corporis]
Length = 388
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 64/115 (55%), Gaps = 13/115 (11%)
Query: 11 KEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAEL-RPEQQP 69
KE EK D +YHCP+ASR IL MDPS+AVCF C +E +F LC QI+ +L + E+QP
Sbjct: 286 KELSYEKTADLSYHCPRASRSRILDMDPSVAVCFFCSSEVEFDILCQQIQEKLIKSEKQP 345
Query: 70 LFELIEDPIEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFLG 124
LFE+ + W P + +P ++ Q S E SD+DF LG
Sbjct: 346 LFEITLNKPRHWIPVE----------NPVERTLNLQDYERS--FENSDEDFVLLG 388
>gi|328707620|ref|XP_001947296.2| PREDICTED: cysteine protease ATG4B-like isoform 1 [Acyrthosiphon
pisum]
gi|328707622|ref|XP_003243448.1| PREDICTED: cysteine protease ATG4B-like isoform 2 [Acyrthosiphon
pisum]
gi|328707624|ref|XP_003243449.1| PREDICTED: cysteine protease ATG4B-like isoform 3 [Acyrthosiphon
pisum]
gi|328707626|ref|XP_003243450.1| PREDICTED: cysteine protease ATG4B-like isoform 4 [Acyrthosiphon
pisum]
Length = 402
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 72/127 (56%), Gaps = 9/127 (7%)
Query: 3 TGHIGVY-DKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRA 61
T IG+ +K+ ++E K+D +YHC Q +RL IL+MDPS+A CF+C+TENDF +LC +++
Sbjct: 279 TQQIGMLPNKDIETEHKIDHSYHCQQINRLPILNMDPSLAACFMCQTENDFNALCHELKV 338
Query: 62 EL----RPEQQPLFELIEDPIEDWT-PTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGS 116
L + QPL + ++ DWT T S + S S + ++ S
Sbjct: 339 HLVQSDQSPSQPLITICDERPSDWTLDTSGTLSTSSENVAVSLSDLELSDKKFL---TDS 395
Query: 117 DDDFEFL 123
DDDFE L
Sbjct: 396 DDDFELL 402
>gi|66529516|ref|XP_624577.1| PREDICTED: cysteine protease ATG4B [Apis mellifera]
Length = 382
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 65/118 (55%), Gaps = 8/118 (6%)
Query: 8 VYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAEL-RPE 66
V K ++ E ++D+TYHC + R+ I+ +DPS+A+CF C TE DF SLC I+ EL PE
Sbjct: 272 VAKKLEEEEIEMDATYHCKFSGRIPIIEIDPSVALCFFCATEKDFKSLCKFIQEELITPE 331
Query: 67 QQPLFELIEDPIEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFLG 124
+QPL EL + + W+ + +S + Q + SD+DFE LG
Sbjct: 332 KQPLLELCAERLAQWSVEDVASEAIAASSFVDFEHVDPQ-------CDTSDEDFELLG 382
>gi|380023311|ref|XP_003695467.1| PREDICTED: cysteine protease ATG4B-like [Apis florea]
Length = 382
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 65/118 (55%), Gaps = 8/118 (6%)
Query: 8 VYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAEL-RPE 66
V K ++ E ++D+TYHC + R+ I+ +DPS+A+CF C TE DF SLC I+ EL PE
Sbjct: 272 VAKKLEEEEIEMDATYHCKFSGRIPIIEIDPSVALCFFCATEKDFKSLCKFIQEELITPE 331
Query: 67 QQPLFELIEDPIEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFLG 124
+QPL EL + + W+ + +S + Q + SD+DFE LG
Sbjct: 332 KQPLLELCAERLAQWSVEDVASEAIAASSFVDFEHVDPQ-------CDTSDEDFELLG 382
>gi|195437827|ref|XP_002066841.1| GK24338 [Drosophila willistoni]
gi|194162926|gb|EDW77827.1| GK24338 [Drosophila willistoni]
Length = 400
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 3 TGHIGVYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAE 62
TG +G K +E++LD TYH A+RL+ MDPS+AVCF+CKT++ F L Q+R E
Sbjct: 272 TGAVG--QKTTTAEQELDETYHQKYAARLNFSAMDPSLAVCFICKTQSSFELLLKQLREE 329
Query: 63 LRPEQQP-LFELIEDPIEDWTPTQ 85
+ P LFE+ + DW T+
Sbjct: 330 VLTLSSPALFEISKSRAVDWDTTE 353
>gi|241999098|ref|XP_002434192.1| cystein protease, putative [Ixodes scapularis]
gi|215495951|gb|EEC05592.1| cystein protease, putative [Ixodes scapularis]
Length = 382
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 60/108 (55%), Gaps = 12/108 (11%)
Query: 20 DSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPE-QQPLFELIEDPI 78
D +YHC ASR++I +DPS+A+CF TE+DF C+ ++ L QQPLFE+ +D
Sbjct: 283 DQSYHCAHASRMNISELDPSVALCFYMATESDFDVWCNLVQKHLISRMQQPLFEITQDRP 342
Query: 79 EDWTPTQPRP-SNLGGTSSPSCS--SMRRQPRRVSGVGEGSDDDFEFL 123
W P P S LG + P ++ Q R+ + SDD+FE L
Sbjct: 343 VGW----PLPDSELGTEAEPQSVEFTLLDQERKY----DTSDDEFEIL 382
>gi|195350257|ref|XP_002041657.1| GM16788 [Drosophila sechellia]
gi|194123430|gb|EDW45473.1| GM16788 [Drosophila sechellia]
Length = 269
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 56/115 (48%), Gaps = 8/115 (6%)
Query: 7 GVYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPE 66
V K +E+ D TYH A+RL+ MDPS+AVCFLCKT + F SL +Q + E+
Sbjct: 138 AVAQKTAAAEQDYDETYHQKHAARLNFSAMDPSLAVCFLCKTSDSFESLLTQFKEEVLSL 197
Query: 67 QQP-LFELIEDPIEDW-------TPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVG 113
P LFE+ + DW PT P GTS ++ + R S G
Sbjct: 198 CSPALFEISQTRAVDWDTTEDIDWPTMPDIDWPAGTSDSDSFAIVEESGRDSDAG 252
>gi|19920488|ref|NP_608563.1| Autophagy-specific gene 4, isoform A [Drosophila melanogaster]
gi|7296129|gb|AAF51423.1| Autophagy-specific gene 4, isoform A [Drosophila melanogaster]
gi|16198037|gb|AAL13802.1| LD26292p [Drosophila melanogaster]
gi|220945806|gb|ACL85446.1| Atg4-PA [synthetic construct]
gi|220955642|gb|ACL90364.1| Atg4-PA [synthetic construct]
Length = 411
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 57/115 (49%), Gaps = 8/115 (6%)
Query: 7 GVYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPE 66
V K +E+ D TYH A+RL+ MDPS+AVCFLCKT + F SL ++++ E+
Sbjct: 280 AVAQKTAAAEQDYDETYHQKHAARLNFSAMDPSLAVCFLCKTSDSFESLLTKLKEEVLSL 339
Query: 67 QQP-LFELIEDPIEDW-------TPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVG 113
P LFE+ + DW PT P GTS ++ + R S G
Sbjct: 340 CSPALFEISQTRAVDWDTTEDIDWPTMPDIDWPAGTSDSDSFAIVEESGRDSDAG 394
>gi|195575679|ref|XP_002077704.1| GD23066 [Drosophila simulans]
gi|194189713|gb|EDX03289.1| GD23066 [Drosophila simulans]
Length = 411
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 56/115 (48%), Gaps = 8/115 (6%)
Query: 7 GVYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPE 66
V K +E+ D TYH A+RL+ MDPS+AVCFLCKT + F SL ++ + E+
Sbjct: 280 AVAQKTAAAEQDYDETYHQKHAARLNFSAMDPSLAVCFLCKTSDSFESLLTKFKEEVLSL 339
Query: 67 QQP-LFELIEDPIEDW-------TPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVG 113
P LFE+ + DW PT P GTS ++ + R S G
Sbjct: 340 CSPALFEISQTRAVDWDTTEDIDWPTMPDIDWPAGTSDSDSFAIVEESGRDSDAG 394
>gi|194853882|ref|XP_001968241.1| GG24763 [Drosophila erecta]
gi|190660108|gb|EDV57300.1| GG24763 [Drosophila erecta]
Length = 411
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 3 TGHIGVYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAE 62
TG +G K +E+ D TYH A+RL MDPS+AVCFLCKT + F SL ++++ E
Sbjct: 278 TGVVG--QKTAVAEQDYDETYHQKHAARLSFSAMDPSLAVCFLCKTSDSFESLLTKLKEE 335
Query: 63 LRPEQQP-LFELIEDPIEDW-------TPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVG 113
+ P LFE+ + DW PT P GTS ++ + R S G
Sbjct: 336 VLSLCSPALFEISQTRAVDWDTTEDIDWPTMPDIDWPAGTSDSDSFAIVEESGRDSDAG 394
>gi|442625102|ref|NP_001259852.1| Autophagy-specific gene 4, isoform B [Drosophila melanogaster]
gi|440213106|gb|AGB92389.1| Autophagy-specific gene 4, isoform B [Drosophila melanogaster]
Length = 410
Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 7 GVYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPE 66
V K +E+ D TYH A+RL+ MDPS+AVCFLCKT + F SL ++++ E+
Sbjct: 280 AVAQKTAAAEQDYDETYHQKHAARLNFSAMDPSLAVCFLCKTSDSFESLLTKLKEEVLSL 339
Query: 67 QQP-LFELIEDPIEDWTPTQ 85
P LFE+ + DW T+
Sbjct: 340 CSPALFEISQTRAVDWDTTE 359
>gi|195470405|ref|XP_002087497.1| GE17286 [Drosophila yakuba]
gi|194173598|gb|EDW87209.1| GE17286 [Drosophila yakuba]
Length = 411
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 3 TGHIGVYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAE 62
TG +G K +E+ D TYH A+RL MDPS+AVCFLCKT + F +L ++++ E
Sbjct: 278 TGVVG--QKTAAAEQDYDETYHQKHAARLSFSAMDPSLAVCFLCKTSDSFEALLTKLKEE 335
Query: 63 LRPEQQP-LFELIEDPIEDW-------TPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVG 113
+ P LFE+ + DW PT P GTS ++ + R S G
Sbjct: 336 VLSLCSPALFEISQARAVDWDTTEDIDWPTMPDIDWPAGTSDSDSFAIVEESGRDSDAG 394
>gi|194759168|ref|XP_001961821.1| GF15159 [Drosophila ananassae]
gi|190615518|gb|EDV31042.1| GF15159 [Drosophila ananassae]
Length = 402
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 53/101 (52%), Gaps = 10/101 (9%)
Query: 3 TGHIGVYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAE 62
TG +G K E++ D TYH A+RL+ MDPS+AVCFLCKT + F SL ++ R E
Sbjct: 278 TGTVG--QKTGVGEQEYDETYHQKHAARLNFSAMDPSLAVCFLCKTSDSFESLLTKFRQE 335
Query: 63 LRPEQQP-LFELIEDPIEDW-------TPTQPRPSNLGGTS 95
+ P LFE+ + DW PT P GTS
Sbjct: 336 VLGLCSPALFEISQTRAVDWDTAEDIEWPTMPDIDWPAGTS 376
>gi|195401363|ref|XP_002059283.1| GJ16311 [Drosophila virilis]
gi|194156157|gb|EDW71341.1| GJ16311 [Drosophila virilis]
Length = 397
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 8 VYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQ 67
V K +E++LD +YH A+RL MDPS+AVCFLCKT N F L Q+R E+
Sbjct: 277 VAQKTTAAEQELDESYHQKYAARLSFGAMDPSLAVCFLCKTRNSFDELLQQLRQEVLSLC 336
Query: 68 QP-LFELIEDPIEDW 81
P LFE+ + DW
Sbjct: 337 TPALFEISQSRAVDW 351
>gi|355669953|gb|AER94691.1| ATG4 autophagy related 4-like protein A [Mustela putorius furo]
Length = 408
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R++IL++DPS+A+ F CK E DF S CS ++ E+ E +FEL++
Sbjct: 307 DQTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDSWCSLVQKEILKENLRMFELVQKHP 366
Query: 79 EDWTPTQP 86
W P P
Sbjct: 367 SHWPPFVP 374
>gi|349605276|gb|AEQ00569.1| Cysteine protease ATG4A-like protein, partial [Equus caballus]
Length = 369
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R++IL++DPS+A+ F CK E DF S CS ++ E+ E +FEL++
Sbjct: 268 DQTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDSWCSLVQKEILKENLRMFELVQKHP 327
Query: 79 EDWTPTQP 86
W P P
Sbjct: 328 SHWPPFIP 335
>gi|345807894|ref|XP_538136.3| PREDICTED: cysteine protease ATG4A [Canis lupus familiaris]
Length = 398
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R++IL++DPS+A+ F CK E DF S CS ++ E+ E +FEL++
Sbjct: 297 DQTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDSWCSLVQKEILKENLRMFELVQKHP 356
Query: 79 EDWTPTQP 86
W P P
Sbjct: 357 SHWPPFVP 364
>gi|338729393|ref|XP_001490718.3| PREDICTED: cysteine protease ATG4A [Equus caballus]
Length = 398
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R++IL++DPS+A+ F CK E DF S CS ++ E+ E +FEL++
Sbjct: 297 DQTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDSWCSLVQKEILKENLRMFELVQKHP 356
Query: 79 EDWTPTQP 86
W P P
Sbjct: 357 SHWPPFIP 364
>gi|195051960|ref|XP_001993206.1| GH13687 [Drosophila grimshawi]
gi|193900265|gb|EDV99131.1| GH13687 [Drosophila grimshawi]
Length = 393
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 7 GVYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPE 66
V K +E++LD +YH A+RL MDPS+AVCFLCKT + F L Q+R E+
Sbjct: 282 AVAQKTTAAEQELDESYHQKYAARLSFAAMDPSLAVCFLCKTRDSFNELLQQLRQEVLSL 341
Query: 67 QQP-LFELIEDPIEDW 81
P LFE+ + DW
Sbjct: 342 CTPALFEISQSRAVDW 357
>gi|197100863|ref|NP_001126588.1| cysteine protease ATG4A [Pongo abelii]
gi|61211744|sp|Q5R699.1|ATG4A_PONAB RecName: Full=Cysteine protease ATG4A; AltName:
Full=Autophagy-related protein 4 homolog A
gi|55732020|emb|CAH92717.1| hypothetical protein [Pongo abelii]
Length = 398
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R++IL++DPS+A+ F CK E DF + CS ++ E+ E +FEL++
Sbjct: 297 DQTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHP 356
Query: 79 EDWTPTQP 86
W P P
Sbjct: 357 SHWPPFVP 364
>gi|301780424|ref|XP_002925628.1| PREDICTED: cysteine protease ATG4A-like [Ailuropoda melanoleuca]
Length = 429
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R+ IL++DPS+A+ F CK E DF S CS ++ E+ E +FEL++
Sbjct: 328 DQTFHCLQSPQRMSILNLDPSVALGFFCKEEKDFDSWCSLVQKEILKENLRMFELVQKHP 387
Query: 79 EDWTPTQP 86
W P P
Sbjct: 388 SHWPPFVP 395
>gi|195118032|ref|XP_002003544.1| GI17971 [Drosophila mojavensis]
gi|193914119|gb|EDW12986.1| GI17971 [Drosophila mojavensis]
Length = 382
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 7 GVYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPE 66
V K +E++LD +YH A+RL MDPS+AVCFLCKT + F L Q+R ++
Sbjct: 276 AVAQKTTAAERELDESYHQKYAARLSFGAMDPSLAVCFLCKTRDSFEELLQQLRQDVLTL 335
Query: 67 QQP-LFELIEDPIEDW 81
P LFE+ + DW
Sbjct: 336 STPALFEISQSRAVDW 351
>gi|119623100|gb|EAX02695.1| ATG4 autophagy related 4 homolog A (S. cerevisiae), isoform CRA_f
[Homo sapiens]
Length = 402
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R++IL++DPS+A+ F CK E DF + CS ++ E+ E +FEL++
Sbjct: 301 DQTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHP 360
Query: 79 EDWTPTQP 86
W P P
Sbjct: 361 SHWPPFVP 368
>gi|30795252|ref|NP_443168.2| cysteine protease ATG4A isoform a [Homo sapiens]
gi|426397036|ref|XP_004064734.1| PREDICTED: cysteine protease ATG4A isoform 1 [Gorilla gorilla
gorilla]
gi|61211859|sp|Q8WYN0.1|ATG4A_HUMAN RecName: Full=Cysteine protease ATG4A; AltName: Full=AUT-like 2
cysteine endopeptidase; AltName: Full=Autophagin-2;
AltName: Full=Autophagy-related cysteine endopeptidase
2; AltName: Full=Autophagy-related protein 4 homolog A;
Short=hAPG4A
gi|18181956|dbj|BAB83889.1| Apg4A [Homo sapiens]
gi|27763979|emb|CAD43218.1| autophagin-2 [Homo sapiens]
gi|38197608|gb|AAH61696.1| ATG4 autophagy related 4 homolog A (S. cerevisiae) [Homo sapiens]
gi|119623094|gb|EAX02689.1| ATG4 autophagy related 4 homolog A (S. cerevisiae), isoform CRA_a
[Homo sapiens]
gi|189069378|dbj|BAG37044.1| unnamed protein product [Homo sapiens]
gi|312151352|gb|ADQ32188.1| ATG4 autophagy related 4 homolog A (S. cerevisiae) [synthetic
construct]
Length = 398
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R++IL++DPS+A+ F CK E DF + CS ++ E+ E +FEL++
Sbjct: 297 DQTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHP 356
Query: 79 EDWTPTQP 86
W P P
Sbjct: 357 SHWPPFVP 364
>gi|395854618|ref|XP_003799779.1| PREDICTED: cysteine protease ATG4A isoform 1 [Otolemur garnettii]
Length = 398
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R++IL++DPS+A+ F CK E DF + CS ++ E+ E +FEL++
Sbjct: 297 DQTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHP 356
Query: 79 EDWTPTQP 86
W P P
Sbjct: 357 SHWPPFVP 364
>gi|402911087|ref|XP_003918174.1| PREDICTED: cysteine protease ATG4A isoform 1 [Papio anubis]
Length = 398
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R++IL++DPS+A+ F CK E DF + CS ++ E+ E +FEL++
Sbjct: 297 DQTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHP 356
Query: 79 EDWTPTQP 86
W P P
Sbjct: 357 SHWPPFVP 364
>gi|355705060|gb|EHH30985.1| Cysteine protease ATG4A, partial [Macaca mulatta]
Length = 396
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R++IL++DPS+A+ F CK E DF + CS ++ E+ E +FEL++
Sbjct: 295 DQTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHP 354
Query: 79 EDWTPTQP 86
W P P
Sbjct: 355 SHWPPFVP 362
>gi|340369400|ref|XP_003383236.1| PREDICTED: cysteine protease ATG4A-like [Amphimedon queenslandica]
Length = 394
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%)
Query: 20 DSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPIE 79
DSTYH Q RLHI +DPS+A+ F C+TE D LC ++R+++ + + LFEL
Sbjct: 278 DSTYHTTQIERLHISELDPSLALGFFCQTEADLDDLCDKLRSDVLSKMKYLFELTRHRPA 337
Query: 80 DWTP 83
W P
Sbjct: 338 YWGP 341
>gi|15487240|emb|CAC69076.1| putative autophagy-related cysteine endopeptidase 2 [Homo sapiens]
Length = 398
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R++IL++DPS+A+ F CK E DF + CS ++ E+ E +FEL++
Sbjct: 297 DQTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHP 356
Query: 79 EDWTPTQP 86
W P P
Sbjct: 357 SHWPPFVP 364
>gi|332226092|ref|XP_003262223.1| PREDICTED: cysteine protease ATG4A isoform 1 [Nomascus leucogenys]
Length = 398
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R++IL++DPS+A+ F CK E DF + CS ++ E+ E +FEL++
Sbjct: 297 DQTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHP 356
Query: 79 EDWTPTQP 86
W P P
Sbjct: 357 SHWPPFVP 364
>gi|410989159|ref|XP_004000832.1| PREDICTED: cysteine protease ATG4A isoform 2 [Felis catus]
Length = 336
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R++IL++DPS+A+ F CK E DF + CS ++ E+ E +FEL++
Sbjct: 235 DQTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHP 294
Query: 79 EDWTPTQP 86
W P P
Sbjct: 295 SHWPPFVP 302
>gi|397497900|ref|XP_003819741.1| PREDICTED: cysteine protease ATG4A isoform 1 [Pan paniscus]
Length = 398
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R++IL++DPS+A+ F CK E DF + CS ++ E+ E +FEL++
Sbjct: 297 DQTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHP 356
Query: 79 EDWTPTQP 86
W P P
Sbjct: 357 SHWPPFVP 364
>gi|281342750|gb|EFB18334.1| hypothetical protein PANDA_015152 [Ailuropoda melanoleuca]
Length = 373
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R+ IL++DPS+A+ F CK E DF S CS ++ E+ E +FEL++
Sbjct: 295 DQTFHCLQSPQRMSILNLDPSVALGFFCKEEKDFDSWCSLVQKEILKENLRMFELVQKHP 354
Query: 79 EDWTPTQP 86
W P P
Sbjct: 355 SHWPPFVP 362
>gi|350537069|ref|NP_001233457.1| cysteine protease ATG4A [Pan troglodytes]
gi|343958112|dbj|BAK62911.1| cysteine protease ATG4A [Pan troglodytes]
gi|410207960|gb|JAA01199.1| ATG4 autophagy related 4 homolog A [Pan troglodytes]
gi|410248796|gb|JAA12365.1| ATG4 autophagy related 4 homolog A [Pan troglodytes]
gi|410290856|gb|JAA24028.1| ATG4 autophagy related 4 homolog A [Pan troglodytes]
gi|410329967|gb|JAA33930.1| ATG4 autophagy related 4 homolog A [Pan troglodytes]
Length = 398
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R++IL++DPS+A+ F CK E DF + CS ++ E+ E +FEL++
Sbjct: 297 DQTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHP 356
Query: 79 EDWTPTQP 86
W P P
Sbjct: 357 SHWPPFVP 364
>gi|387762879|ref|NP_001248420.1| cysteine protease ATG4A [Macaca mulatta]
gi|380809390|gb|AFE76570.1| cysteine protease ATG4A isoform a [Macaca mulatta]
gi|383413573|gb|AFH30000.1| cysteine protease ATG4A isoform a [Macaca mulatta]
Length = 398
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R++IL++DPS+A+ F CK E DF + CS ++ E+ E +FEL++
Sbjct: 297 DQTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHP 356
Query: 79 EDWTPTQP 86
W P P
Sbjct: 357 SHWPPFVP 364
>gi|444730159|gb|ELW70550.1| Cysteine protease ATG4A [Tupaia chinensis]
Length = 364
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R++IL++DPS+A+ F CK E DF + CS ++ E+ E +FEL++
Sbjct: 263 DQTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHP 322
Query: 79 EDWTPTQP 86
W P P
Sbjct: 323 SHWPPFVP 330
>gi|291407754|ref|XP_002720229.1| PREDICTED: autophagy-related cysteine endopeptidase 2 [Oryctolagus
cuniculus]
Length = 405
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R++IL++DPS+A+ F CK E DF + CS ++ E+ E +FEL++
Sbjct: 304 DQTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHP 363
Query: 79 EDWTPTQP 86
W P P
Sbjct: 364 SHWPPFVP 371
>gi|119623101|gb|EAX02696.1| ATG4 autophagy related 4 homolog A (S. cerevisiae), isoform CRA_g
[Homo sapiens]
Length = 340
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R++IL++DPS+A+ F CK E DF + CS ++ E+ E +FEL++
Sbjct: 239 DQTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHP 298
Query: 79 EDWTPTQP 86
W P P
Sbjct: 299 SHWPPFVP 306
>gi|395854620|ref|XP_003799780.1| PREDICTED: cysteine protease ATG4A isoform 2 [Otolemur garnettii]
Length = 336
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R++IL++DPS+A+ F CK E DF + CS ++ E+ E +FEL++
Sbjct: 235 DQTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHP 294
Query: 79 EDWTPTQP 86
W P P
Sbjct: 295 SHWPPFVP 302
>gi|151554833|gb|AAI47963.1| ATG4 autophagy related 4 homolog A (S. cerevisiae) [Bos taurus]
Length = 398
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q R++IL++DPS+A+ F CK E DF S CS ++ E+ E +FEL++
Sbjct: 297 DQTFHCLQPPQRMNILNLDPSVALGFFCKEEKDFDSWCSLVQKEILKENLRMFELVQKHP 356
Query: 79 EDWTPTQP 86
W P P
Sbjct: 357 SHWPPFVP 364
>gi|47564112|ref|NP_001001171.1| cysteine protease ATG4A [Bos taurus]
gi|61211781|sp|Q6PZ05.1|ATG4A_BOVIN RecName: Full=Cysteine protease ATG4A; AltName:
Full=Autophagy-related cysteine endopeptidase 2A;
Short=Autophagin-2A; AltName: Full=Autophagy-related
protein 4 homolog A; AltName: Full=bAut2A
gi|45861656|gb|AAS78581.1| Aut2a [Bos taurus]
Length = 398
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q R++IL++DPS+A+ F CK E DF S CS ++ E+ E +FEL++
Sbjct: 297 DQTFHCLQPPQRMNILNLDPSVALGFFCKEEKDFDSWCSLVQKEILKENLRMFELVQKHP 356
Query: 79 EDWTPTQP 86
W P P
Sbjct: 357 SHWPPFVP 364
>gi|410989157|ref|XP_004000831.1| PREDICTED: cysteine protease ATG4A isoform 1 [Felis catus]
Length = 398
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R++IL++DPS+A+ F CK E DF + CS ++ E+ E +FEL++
Sbjct: 297 DQTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHP 356
Query: 79 EDWTPTQP 86
W P P
Sbjct: 357 SHWPPFVP 364
>gi|426257739|ref|XP_004022480.1| PREDICTED: cysteine protease ATG4A [Ovis aries]
Length = 398
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q R++IL++DPS+A+ F CK E DF S CS ++ E+ E +FEL++
Sbjct: 297 DQTFHCLQPPQRMNILNLDPSVALGFFCKEEKDFDSWCSLVQKEILKENLRMFELVQKHP 356
Query: 79 EDWTPTQP 86
W P P
Sbjct: 357 SHWPPFVP 364
>gi|403289551|ref|XP_003935915.1| PREDICTED: cysteine protease ATG4A isoform 1 [Saimiri boliviensis
boliviensis]
Length = 422
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R++IL++DPS+A+ F CK E DF + CS ++ E+ E +FEL++
Sbjct: 321 DQTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHP 380
Query: 79 EDWTPTQP 86
W P P
Sbjct: 381 SHWPPFIP 388
>gi|30795248|ref|NP_840054.1| cysteine protease ATG4A isoform b [Homo sapiens]
gi|426397038|ref|XP_004064735.1| PREDICTED: cysteine protease ATG4A isoform 2 [Gorilla gorilla
gorilla]
gi|15487242|emb|CAC69077.1| putative autophagy-related cysteine endopeptidase 2 [Homo sapiens]
gi|119623095|gb|EAX02690.1| ATG4 autophagy related 4 homolog A (S. cerevisiae), isoform CRA_b
[Homo sapiens]
Length = 336
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R++IL++DPS+A+ F CK E DF + CS ++ E+ E +FEL++
Sbjct: 235 DQTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHP 294
Query: 79 EDWTPTQP 86
W P P
Sbjct: 295 SHWPPFVP 302
>gi|402911089|ref|XP_003918175.1| PREDICTED: cysteine protease ATG4A isoform 2 [Papio anubis]
Length = 336
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R++IL++DPS+A+ F CK E DF + CS ++ E+ E +FEL++
Sbjct: 235 DQTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHP 294
Query: 79 EDWTPTQP 86
W P P
Sbjct: 295 SHWPPFVP 302
>gi|417410362|gb|JAA51656.1| Putative cysteine protease required for autophagy, partial
[Desmodus rotundus]
Length = 396
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R+ IL++DPS+A+ F CK E DF S CS ++ E+ E +FEL++
Sbjct: 295 DQTFHCLQSPQRMSILNLDPSVALGFFCKEEKDFDSWCSLVQKEILKENLRMFELVQKHP 354
Query: 79 EDWTPTQP 86
W P P
Sbjct: 355 SHWPPFVP 362
>gi|403289553|ref|XP_003935916.1| PREDICTED: cysteine protease ATG4A isoform 2 [Saimiri boliviensis
boliviensis]
Length = 360
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R++IL++DPS+A+ F CK E DF + CS ++ E+ E +FEL++
Sbjct: 259 DQTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHP 318
Query: 79 EDWTPTQP 86
W P P
Sbjct: 319 SHWPPFIP 326
>gi|296236154|ref|XP_002763201.1| PREDICTED: uncharacterized protein LOC100409486 [Callithrix
jacchus]
Length = 360
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R++IL++DPS+A+ F CK E DF + CS ++ E+ E +FEL++
Sbjct: 259 DQTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHP 318
Query: 79 EDWTPTQP 86
W P P
Sbjct: 319 SHWPPFIP 326
>gi|397497902|ref|XP_003819742.1| PREDICTED: cysteine protease ATG4A isoform 2 [Pan paniscus]
Length = 336
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R++IL++DPS+A+ F CK E DF + CS ++ E+ E +FEL++
Sbjct: 235 DQTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHP 294
Query: 79 EDWTPTQP 86
W P P
Sbjct: 295 SHWPPFVP 302
>gi|332226094|ref|XP_003262224.1| PREDICTED: cysteine protease ATG4A isoform 2 [Nomascus leucogenys]
Length = 336
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R++IL++DPS+A+ F CK E DF + CS ++ E+ E +FEL++
Sbjct: 235 DQTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHP 294
Query: 79 EDWTPTQP 86
W P P
Sbjct: 295 SHWPPFVP 302
>gi|296470926|tpg|DAA13041.1| TPA: cysteine protease ATG4A [Bos taurus]
Length = 396
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q R++IL++DPS+A+ F CK E DF S CS ++ E+ E +FEL++
Sbjct: 297 DQTFHCLQPPQRMNILNLDPSVALGFFCKEEKDFDSWCSLVQKEILKENLRMFELVQKHP 356
Query: 79 EDWTPTQP 86
W P P
Sbjct: 357 SHWPPFVP 364
>gi|30109219|gb|AAH41862.1| ATG4 autophagy related 4 homolog A (S. cerevisiae) [Homo sapiens]
gi|119623096|gb|EAX02691.1| ATG4 autophagy related 4 homolog A (S. cerevisiae), isoform CRA_c
[Homo sapiens]
gi|119623098|gb|EAX02693.1| ATG4 autophagy related 4 homolog A (S. cerevisiae), isoform CRA_c
[Homo sapiens]
Length = 321
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R++IL++DPS+A+ F CK E DF + CS ++ E+ E +FEL++
Sbjct: 220 DQTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHP 279
Query: 79 EDWTPTQP 86
W P P
Sbjct: 280 SHWPPFVP 287
>gi|194374239|dbj|BAG57015.1| unnamed protein product [Homo sapiens]
Length = 259
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R++IL++DPS+A+ F CK E DF + CS ++ E+ E +FEL++
Sbjct: 158 DQTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHP 217
Query: 79 EDWTPTQP 86
W P P
Sbjct: 218 SHWPPFVP 225
>gi|125986465|ref|XP_001356996.1| GA18177 [Drosophila pseudoobscura pseudoobscura]
gi|54645322|gb|EAL34062.1| GA18177 [Drosophila pseudoobscura pseudoobscura]
Length = 409
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
Query: 3 TGHIGVYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAE 62
TG +G K E++ D TYH A+RL MDPS+AVCFLCKT + F L ++R E
Sbjct: 278 TGVVG--QKTSSGEQEHDETYHQKHAARLSFSAMDPSLAVCFLCKTSDSFQQLLEKLRQE 335
Query: 63 LRPEQQP-LFELIEDPIEDW-------TPTQPRPSNLGGTS 95
+ P LFE+ + DW PT P GTS
Sbjct: 336 VLGMCSPALFEISQTRAVDWDTAEDIEWPTMPDIDWPAGTS 376
>gi|195159572|ref|XP_002020652.1| GL15485 [Drosophila persimilis]
gi|194117602|gb|EDW39645.1| GL15485 [Drosophila persimilis]
Length = 409
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
Query: 3 TGHIGVYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAE 62
TG +G K E++ D TYH A+RL MDPS+AVCFLCKT + F L ++R E
Sbjct: 278 TGVVG--QKTSSGEQEHDETYHQKHAARLSFSAMDPSLAVCFLCKTSDSFQQLLDKLRQE 335
Query: 63 LRPEQQP-LFELIEDPIEDW-------TPTQPRPSNLGGTS 95
+ P LFE+ + DW PT P GTS
Sbjct: 336 VLGMCSPALFEISQTRAVDWDTAEDIEWPTMPDIDWPAGTS 376
>gi|432110194|gb|ELK33968.1| Cysteine protease ATG4A, partial [Myotis davidii]
Length = 256
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R++IL++DPS+A+ F CK E DF + CS ++ E+ E +FEL++
Sbjct: 155 DQTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHP 214
Query: 79 EDWTPTQP 86
W P P
Sbjct: 215 SHWPPFVP 222
>gi|431905146|gb|ELK10197.1| Cysteine protease ATG4A [Pteropus alecto]
Length = 342
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q R++IL++DPS+A+ F CK E DF S CS ++ E+ E +FEL++
Sbjct: 241 DQTFHCLQPPQRMNILNLDPSVALGFFCKEEKDFDSWCSLVQKEILKENLRMFELVQKHP 300
Query: 79 EDWTPTQP 86
W P P
Sbjct: 301 SHWPPFVP 308
>gi|27763985|emb|CAD43221.1| autophagin-2 [Mus musculus]
gi|148675648|gb|EDL07595.1| mCG64870 [Mus musculus]
Length = 396
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R+ IL++DPS+A+ F CK E DF + CS ++ E+ E +FEL++
Sbjct: 294 DQTFHCLQSPQRMSILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHP 353
Query: 79 EDWTPTQP 86
W P P
Sbjct: 354 SHWPPFVP 361
>gi|26334447|dbj|BAC30924.1| unnamed protein product [Mus musculus]
Length = 396
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R+ IL++DPS+A+ F CK E DF + CS ++ E+ E +FEL++
Sbjct: 294 DQTFHCLQSPQRMSILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHP 353
Query: 79 EDWTPTQP 86
W P P
Sbjct: 354 SHWPPFVP 361
>gi|74136555|ref|NP_777364.3| cysteine protease ATG4A [Mus musculus]
gi|61211821|sp|Q8C9S8.2|ATG4A_MOUSE RecName: Full=Cysteine protease ATG4A; AltName: Full=AUT-like 2
cysteine endopeptidase; AltName: Full=Autophagin-2;
AltName: Full=Autophagy-related cysteine endopeptidase
2; AltName: Full=Autophagy-related protein 4 homolog A
gi|59809037|gb|AAH89500.1| Atg4a protein [Mus musculus]
gi|74193939|dbj|BAE36898.1| unnamed protein product [Mus musculus]
Length = 396
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R+ IL++DPS+A+ F CK E DF + CS ++ E+ E +FEL++
Sbjct: 294 DQTFHCLQSPQRMSILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHP 353
Query: 79 EDWTPTQP 86
W P P
Sbjct: 354 SHWPPFVP 361
>gi|354500801|ref|XP_003512485.1| PREDICTED: cysteine protease ATG4A-like [Cricetulus griseus]
gi|344251116|gb|EGW07220.1| Cysteine protease ATG4A [Cricetulus griseus]
Length = 398
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R+ IL++DPS+A+ F CK E DF + CS ++ E+ E +FEL++
Sbjct: 297 DETFHCLQSPQRMSILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHP 356
Query: 79 EDWTPTQP 86
W P P
Sbjct: 357 SHWPPFVP 364
>gi|443684303|gb|ELT88258.1| hypothetical protein CAPTEDRAFT_225251 [Capitella teleta]
Length = 410
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 20 DSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAE-LRPEQQPLFELIEDPI 78
D++YHC + R+ + ++DPS+AV F C+TE DF LC IR L ++ P+FEL +
Sbjct: 309 DASYHCSYSCRMPVSYLDPSVAVGFFCQTEADFEDLCQCIRKYILHGQKTPMFELHQRRP 368
Query: 79 EDWTPTQPRP 88
W P P P
Sbjct: 369 RHWPPFDPYP 378
>gi|291226947|ref|XP_002733451.1| PREDICTED: Autophagy-specific gene 4-like [Saccoglossus
kowalevskii]
Length = 356
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Query: 20 DSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPIE 79
D TYHC SR++I+H+DPSIA+ F C E+DF LC+ I+ ++R E EL + +E
Sbjct: 286 DDTYHCKHPSRMNIMHLDPSIALGFFCHCESDFDDLCTSIKQKIRSEDD--IELSYNTME 343
Query: 80 D 80
D
Sbjct: 344 D 344
>gi|312378951|gb|EFR25375.1| hypothetical protein AND_09326 [Anopheles darlingi]
Length = 350
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 3 TGHIGVYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAE 62
G IG +K++ E++ D+T+H ASR+ MDPS+AVCFLC + F L + +
Sbjct: 233 VGCIG--EKQESVEQEQDATFHQRHASRIAFASMDPSLAVCFLCCSRAQFDQLVAHFKER 290
Query: 63 LR-PEQQPLFELIEDPIEDWTPTQPRPSNLGGTSSPS 98
L QPLFE+ + WTPT ++ S P+
Sbjct: 291 LNGGGSQPLFEVTKTRQAPWTPTTVSSASSRKNSEPN 327
>gi|157115549|ref|XP_001658259.1| Autophagy-specific protein, putative [Aedes aegypti]
gi|108876876|gb|EAT41101.1| AAEL007228-PA [Aedes aegypti]
Length = 389
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 3 TGHIGVYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAE 62
+G IG K E++LD T+H A R++ MDPS+A+CFLC T DF L + + +
Sbjct: 260 SGTIG--SKRDPDERELDETFHQKYARRINFKGMDPSLALCFLCATRKDFDDLIQRFKED 317
Query: 63 LRPEQ-QPLFELIEDPIEDWTPTQPRPSNLGGTSSPS 98
L QPLFE+ + WTPT ++ S P+
Sbjct: 318 LNGGGCQPLFEVTKTRQAPWTPTTTSSTSSRKNSEPN 354
>gi|148682816|gb|EDL14763.1| mCG116861, isoform CRA_a [Mus musculus]
Length = 127
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R+ IL++DPS+A+ F CK E DF + CS ++ E+ E +FEL++
Sbjct: 25 DQTFHCLQSPQRMSILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHP 84
Query: 79 EDWTPTQP 86
W P P
Sbjct: 85 SHWPPFVP 92
>gi|344286328|ref|XP_003414911.1| PREDICTED: cysteine protease ATG4A [Loxodonta africana]
Length = 411
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R++IL++DPS+A+ F CK E DF + C ++ E+ E +FEL++
Sbjct: 310 DQTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCCLVQKEILKENLRMFELVQKHP 369
Query: 79 EDWTPTQP 86
W P P
Sbjct: 370 SHWPPFVP 377
>gi|346466653|gb|AEO33171.1| hypothetical protein [Amblyomma maculatum]
Length = 401
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Query: 14 DSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPE-QQPLFE 72
D E D +YHC ASR+ I +DPSIA+CF TE +F S C+ L + +QPLFE
Sbjct: 295 DVEFPEDESYHCAHASRMDIGQLDPSIALCFYLPTECEFDSWCNLAHKHLITQMKQPLFE 354
Query: 73 LIEDPIEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+ E+ W L S ++ Q R+ + SDD+FE L
Sbjct: 355 ITEERPLGWPDFTEEQHRLEHEPMTSEFTVVEQERKY----DTSDDEFEIL 401
>gi|427783027|gb|JAA56965.1| Putative cysteine protease required for autophagy [Rhipicephalus
pulchellus]
Length = 390
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Query: 20 DSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPE-QQPLFELIEDPI 78
D +YHC ASR+ I +DPSIA+CF TE +F S C+ L + +QPLFE+ E
Sbjct: 290 DESYHCAHASRMDIGQLDPSIALCFYMATEAEFDSWCNLAHKHLISQMKQPLFEITEHRP 349
Query: 79 EDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
W L + ++ Q R+ + SDD+FE L
Sbjct: 350 LGWPDFAEDQQRLDEEPQSTEFTVLEQERKF----DTSDDEFEIL 390
>gi|146387686|pdb|2P82|A Chain A, Cysteine Protease Atg4a
gi|146387687|pdb|2P82|B Chain B, Cysteine Protease Atg4a
gi|146387688|pdb|2P82|C Chain C, Cysteine Protease Atg4a
gi|146387689|pdb|2P82|D Chain D, Cysteine Protease Atg4a
Length = 355
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R++IL++DPS+A+ F CK E DF + CS ++ E+ E +FEL++
Sbjct: 293 DQTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHP 352
Query: 79 EDW 81
W
Sbjct: 353 SHW 355
>gi|291202714|dbj|BAI82576.1| autophagy-related 4 [Haemaphysalis longicornis]
Length = 387
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 14 DSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQ-QPLFE 72
D+E D +YHC ASR+ I +DPSIA+CF TE +F S C+ L E QPLFE
Sbjct: 281 DTEFPDDESYHCAHASRMDIGQLDPSIALCFYLPTEAEFDSWCNLAHKHLISEMSQPLFE 340
Query: 73 LIEDPIEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+ E W L + ++ Q R+ + SDD+FE +
Sbjct: 341 ITEHRPLGWPDFVDEEQRLDQEPQTADFTVLEQERKY----DTSDDEFEII 387
>gi|392343434|ref|XP_003754884.1| PREDICTED: cysteine protease ATG4A-like, partial [Rattus
norvegicus]
gi|392355909|ref|XP_003752169.1| PREDICTED: cysteine protease ATG4A-like, partial [Rattus
norvegicus]
Length = 126
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R+ IL++DPS+A+ F CK E DF + CS ++ E+ E +FEL++
Sbjct: 25 DHTFHCLQSPQRMSILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHP 84
Query: 79 EDWTPTQP 86
W P P
Sbjct: 85 SHWPPFVP 92
>gi|405972565|gb|EKC37327.1| Cysteine protease ATG4B [Crassostrea gigas]
Length = 405
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 12/111 (10%)
Query: 14 DSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQI-RAELRPEQQPLFE 72
DS D +YHCP S ++++ +DPSIA+ F C TE +F L + + + + P+FE
Sbjct: 306 DSPNFSDESYHCPYPSTMNVMELDPSIALGFYCGTEKEFDDLTQSVQKFVVGSSKTPMFE 365
Query: 73 LIEDPIEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
L +D W P + S G T+S S +M G+ +D++FE +
Sbjct: 366 LYKDRPPHWPPYE---SYTGQTTSASGVTMTG--------GQDTDEEFELV 405
>gi|170572866|ref|XP_001892265.1| Peptidase family C54 containing protein [Brugia malayi]
gi|158602497|gb|EDP38912.1| Peptidase family C54 containing protein [Brugia malayi]
Length = 440
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ-PLFELIEDPI 78
DSTYHCP I +DPS+A+ F C TE+D++ L +++R L P PLFE++E
Sbjct: 345 DSTYHCPFILSTKIDKVDPSLALGFFCHTEDDYSELANRLRTHLLPASTPPLFEMLETRP 404
Query: 79 EDWTPTQP 86
+++ P P
Sbjct: 405 KNFPPFIP 412
>gi|158296556|ref|XP_316946.4| AGAP008497-PA [Anopheles gambiae str. PEST]
gi|157014766|gb|EAA12240.4| AGAP008497-PA [Anopheles gambiae str. PEST]
Length = 389
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 5 HIGVYDKEQD-SEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAEL 63
+G +QD +E++LD T+H ASR+ MDPS+AVCFLC + F L ++ +
Sbjct: 259 RVGTVGSKQDPAEQELDETFHQRYASRISFTSMDPSLAVCFLCVSRQQFDQLVARFNDSV 318
Query: 64 R-PEQQPLFELIEDPIEDWTPTQPRPSNLGGTSSPS 98
Q LFE+ + WTPT ++ S P+
Sbjct: 319 NGGTSQALFEVTKTRQAPWTPTTASSASSRKNSGPT 354
>gi|395545675|ref|XP_003774724.1| PREDICTED: cysteine protease ATG4A [Sarcophilus harrisii]
Length = 431
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 20 DSTYHCPQAS-RLHILHMDPSIAVCFLCKTENDFASLCSQIRAE-LRPEQQPLFELIEDP 77
D ++HC Q+ R+ IL++DPS+A+ F CK E DF + C ++ E L+P+ +FEL+E
Sbjct: 331 DQSFHCQQSPPRMKILNLDPSVALGFFCKEEEDFDNWCGLVQKEILKPQSLQMFELVEKH 390
Query: 78 IEDW----TPTQPRPSNLGGTSSPSCSSM 102
W PT+P + G S +++
Sbjct: 391 PAHWPPFIPPTKPEVTTTGAEFIESTNNL 419
>gi|410920724|ref|XP_003973833.1| PREDICTED: cysteine protease ATG4B-like [Takifugu rubripes]
Length = 394
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQI-RAELRPEQQPLFELIEDP 77
D TYHC R+HI +DPSIAV F C+TE++F C +I R + P+FEL++
Sbjct: 297 DDTYHCQHPPCRMHICELDPSIAVGFFCRTEDEFDDWCMRIRRLSCNKDNLPMFELVDS- 355
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L G + + + R+ + D++FE L
Sbjct: 356 ---------QPSHLVGVDAINLTPDFSDSERLERFFDSEDEEFEIL 392
>gi|350595874|ref|XP_003484197.1| PREDICTED: cysteine protease ATG4A [Sus scrofa]
Length = 393
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIE 75
D T+HC Q R++IL++DPS+A+ F C+ E DF S CS ++ E+ E +FEL++
Sbjct: 292 DQTFHCLQPPQRMNILNLDPSVALGFFCQEEKDFDSWCSLVQKEILKENLRMFELVQ 348
>gi|312073335|ref|XP_003139474.1| hypothetical protein LOAG_03889 [Loa loa]
gi|307765357|gb|EFO24591.1| hypothetical protein LOAG_03889 [Loa loa]
Length = 458
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ-PLFELIEDPI 78
DSTYHCP I +DPS+A+ FLC TE+D+ L ++R L P PLFE++E
Sbjct: 363 DSTYHCPFILTTKIDKVDPSLALGFLCHTEDDYNELAQRLRTHLLPASTPPLFEMLETRP 422
Query: 79 EDWTPTQP 86
+++ P P
Sbjct: 423 KNFPPFVP 430
>gi|345329187|ref|XP_003431344.1| PREDICTED: LOW QUALITY PROTEIN: cysteine protease ATG4A-like
[Ornithorhynchus anatinus]
Length = 436
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAE-LRPEQQPLFELIEDP 77
D ++HC QA R+ I+++DPS+A+ F CK E DF + CS ++ E LR + +FEL++
Sbjct: 336 DHSFHCQQAPQRMKIMNLDPSVALGFFCKEEKDFDNWCSLVQKEILRQQSLRMFELVQKR 395
Query: 78 IEDWTPTQP 86
W P P
Sbjct: 396 PSHWPPFIP 404
>gi|348563665|ref|XP_003467627.1| PREDICTED: cysteine protease ATG4A-like [Cavia porcellus]
Length = 398
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIE 75
D T+HC Q+ +++IL++DPS+A+ F CK E DF + CS ++ E+ E +FEL++
Sbjct: 297 DQTFHCLQSPQQMNILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQ 353
>gi|260795879|ref|XP_002592932.1| hypothetical protein BRAFLDRAFT_275700 [Branchiostoma floridae]
gi|229278156|gb|EEN48943.1| hypothetical protein BRAFLDRAFT_275700 [Branchiostoma floridae]
Length = 380
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 20 DSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAEL--RPEQQPLFELIEDP 77
DS++HC SR++I +DPSIA+ F C+ E DFA LC +R + + Q +FE+++
Sbjct: 300 DSSFHCTHPSRMNIQDLDPSIALGFFCQDEADFADLCENMRRLIIGQKTQNAMFEVVQSR 359
Query: 78 IEDWTP 83
W P
Sbjct: 360 PAHWPP 365
>gi|351713264|gb|EHB16183.1| Cysteine protease ATG4B [Heterocephalus glaber]
Length = 475
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 52/106 (49%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D T+HC R+ I +DPSIAV F CKTE+DF C Q+R L+ P+FEL+E
Sbjct: 378 DETFHCQHPPCRMGIGELDPSIAVGFFCKTEDDFRDWCQQVRKLSLQGGALPMFELVEQ- 436
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 437 ---------QPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 473
>gi|156395764|ref|XP_001637280.1| predicted protein [Nematostella vectensis]
gi|156224391|gb|EDO45217.1| predicted protein [Nematostella vectensis]
Length = 368
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Query: 20 DSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAE-LRPEQQPLFELIEDPI 78
D ++HC R++I +DPS+A+ F CK+E DF LC QI+ + + + +P+FE+ +D
Sbjct: 264 DGSFHCVYPCRMNIADVDPSVALGFFCKSEEDFDDLCQQIQKKIIDGKSRPMFEIAKDRP 323
Query: 79 EDW----TPTQP 86
+ W PT+P
Sbjct: 324 QHWPVLEIPTRP 335
>gi|344299096|ref|XP_003421224.1| PREDICTED: cysteine protease ATG4B [Loxodonta africana]
Length = 420
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D T+HC R++I +DPSIAV F CKTE DF C Q++ L P+FEL+E
Sbjct: 323 DETFHCQHPPCRMNIAELDPSIAVGFFCKTEEDFNDWCQQVKKLSLLSGALPMFELVEQ- 381
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 382 ---------QPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 418
>gi|225709006|gb|ACO10349.1| Cysteine protease ATG4B [Caligus rogercresseyi]
Length = 381
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 15/109 (13%)
Query: 20 DSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAEL-RPEQQPLFELIEDPI 78
D TYH +A R+ +DPS+++CFLCK E++F +C + +L R PLFE+
Sbjct: 283 DKTYHTDRAYRMDFKDLDPSLSLCFLCKDESEFEDMCERFLFKLIRGHNSPLFEI----- 337
Query: 79 EDWTPTQPRPSNLGGTSSPSC-SSMRRQP-RRVSGVG--EGSDDDFEFL 123
+ RP +L +S P SS P R+ G + SDD+FE L
Sbjct: 338 -----CRQRPEHLMPSSGPEIPSSSEEGPGRKAEGNKSLDTSDDEFEIL 381
>gi|395528686|ref|XP_003766458.1| PREDICTED: cysteine protease ATG4B [Sarcophilus harrisii]
Length = 393
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR-PEQQPLFELIEDP 77
D T+HC R++I +DPSIAV F CKTE DF C Q++ R P P+FEL+E
Sbjct: 296 DETFHCQHPPCRMNIGELDPSIAVGFFCKTEEDFNDWCQQVKKLSRIPGALPMFELVER- 354
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+ + S R+ + D+DFE L
Sbjct: 355 ---------QPSHFSCPDVLNLSLDSSDVERLERFFDSEDEDFEIL 391
>gi|50369556|gb|AAH76463.1| Atg4b protein, partial [Danio rerio]
Length = 393
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 11/105 (10%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D +YHC R+HI +DPSIA F C+TE+DF C+QIR P+FEL++
Sbjct: 297 DDSYHCQHPPCRMHICELDPSIAAGFFCQTEDDFDDWCAQIRKVSNCRGLPMFELVDS-- 354
Query: 79 EDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + + R+ + D++FE L
Sbjct: 355 --------QPSHLITADVLNLTPDFSDSDRLERFFDSEDEEFEIL 391
>gi|341885317|gb|EGT41252.1| hypothetical protein CAEBREN_15768 [Caenorhabditis brenneri]
Length = 457
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 14/108 (12%)
Query: 20 DSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ-PLFELIEDPI 78
DSTYHC + +DPS+A+ C++ DF +LC +++ P + P+FE +E
Sbjct: 329 DSTYHCQMMQWMEFESIDPSLALALFCESREDFDNLCEELQKTTLPASKPPMFEFLEK-- 386
Query: 79 EDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGS---DDDFEFL 123
RP L + SM+ + + +G + DDDFE L
Sbjct: 387 --------RPKYLPKFEPYTGVSMKIEMKEFDDIGAANVKIDDDFEVL 426
>gi|61211768|sp|Q6DG88.2|ATG4B_DANRE RecName: Full=Cysteine protease ATG4B; AltName:
Full=Autophagy-related protein 4 homolog B
Length = 394
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 11/105 (10%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D +YHC R+HI +DPSIA F C+TE+DF C+QIR P+FEL++
Sbjct: 298 DDSYHCQHPPCRMHICELDPSIAAGFFCQTEDDFDDWCAQIRKVSNCRGLPMFELVDS-- 355
Query: 79 EDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + + R+ + D++FE L
Sbjct: 356 --------QPSHLITADVLNLTPDFSDSDRLERFFDSEDEEFEIL 392
>gi|301775535|ref|XP_002923195.1| PREDICTED: cysteine protease ATG4B-like [Ailuropoda melanoleuca]
Length = 405
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 12/112 (10%)
Query: 14 DSEKKLDSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIR-AELRPEQQPLF 71
DS D ++HC SR+ I +DPSIAV F CKTE+DF C Q+R L P+F
Sbjct: 302 DSCFIADESFHCRHPPSRMSIGELDPSIAVGFFCKTEDDFDDWCQQVRQLSLLGGALPMF 361
Query: 72 ELIEDPIEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
EL+E +PS+L + S R+ + D+DFE L
Sbjct: 362 ELVEQ----------QPSHLACPDVLNVSLDSSDVERLERFFDSEDEDFEIL 403
>gi|148237097|ref|NP_001082821.1| cysteine protease ATG4B [Danio rerio]
gi|141795460|gb|AAI34887.1| Atg4b protein [Danio rerio]
Length = 394
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 11/105 (10%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D +YHC R+HI +DPSIA F C+TE+DF C+QIR P+FEL++
Sbjct: 298 DDSYHCQHPPCRMHICELDPSIAAGFFCQTEDDFDDWCAQIRKVSNCRGLPMFELVDS-- 355
Query: 79 EDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + + R+ + D++FE L
Sbjct: 356 --------QPSHLITADVLNLTPDFSDSDRLERFFDSEDEEFEIL 392
>gi|73994337|ref|XP_851977.1| PREDICTED: cysteine protease ATG4B [Canis lupus familiaris]
Length = 394
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIR-AELRPEQQPLFELIEDP 77
D ++HC SR+ I +DPSIAV F CKTE DF C Q+R L P+FEL+E
Sbjct: 297 DESFHCQHPPSRMSIGELDPSIAVGFFCKTEGDFDDWCQQVRQLSLLGGALPMFELVEQ- 355
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 356 ---------QPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 392
>gi|341903727|gb|EGT59662.1| CBN-ATG-4.1 protein [Caenorhabditis brenneri]
Length = 433
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 14/108 (12%)
Query: 20 DSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ-PLFELIEDPI 78
DSTYHC + +DPS+A+ C++ DF +LC +++ P + P+FE +E
Sbjct: 305 DSTYHCQMMQWMEFESIDPSLALALFCESREDFDNLCQELQKTTLPASKPPMFEFLEK-- 362
Query: 79 EDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGS---DDDFEFL 123
RP L + SM+ + + +G + DDDFE L
Sbjct: 363 --------RPKYLPKFEPYTGVSMKIEMKEFDDIGAANVKIDDDFEVL 402
>gi|395851538|ref|XP_003798310.1| PREDICTED: cysteine protease ATG4B [Otolemur garnettii]
Length = 393
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F CKTE+DF C Q++ L P+FEL+E P
Sbjct: 296 DESFHCQHPPCRMSIGELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVEQP 355
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
PS+L + S R+ + D+DFE L
Sbjct: 356 ----------PSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 391
>gi|432107261|gb|ELK32675.1| Cysteine protease ATG4B [Myotis davidii]
Length = 394
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 52/106 (49%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC SR+ I +DPSIAV F CKTE+DF C Q++ L P+FEL+E
Sbjct: 297 DESFHCQHPPSRMSIGELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVEQ- 355
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 356 ---------QPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 392
>gi|453230621|ref|NP_001263575.1| Protein ATG-4.1, isoform b [Caenorhabditis elegans]
gi|412974713|emb|CCO25637.1| Protein ATG-4.1, isoform b [Caenorhabditis elegans]
Length = 481
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 14/108 (12%)
Query: 20 DSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ-PLFELIEDPI 78
DSTYHC + ++DPS+A+ C+T ++F +LC ++ P Q P+FE +
Sbjct: 364 DSTYHCQMMLWIEYENVDPSLALAMFCETRDEFENLCETLQKTTLPASQPPMFEFL---- 419
Query: 79 EDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGS---DDDFEFL 123
Q RP L + SM+ + + +G + DDDFE L
Sbjct: 420 ------QRRPKYLPKFEPYTGVSMKIEMKEFDDIGAANVKIDDDFEVL 461
>gi|212645205|ref|NP_493375.2| Protein ATG-4.1, isoform a [Caenorhabditis elegans]
gi|193247781|emb|CAB54483.2| Protein ATG-4.1, isoform a [Caenorhabditis elegans]
Length = 454
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 14/108 (12%)
Query: 20 DSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ-PLFELIEDPI 78
DSTYHC + ++DPS+A+ C+T ++F +LC ++ P Q P+FE +
Sbjct: 337 DSTYHCQMMLWIEYENVDPSLALAMFCETRDEFENLCETLQKTTLPASQPPMFEFL---- 392
Query: 79 EDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGS---DDDFEFL 123
Q RP L + SM+ + + +G + DDDFE L
Sbjct: 393 ------QRRPKYLPKFEPYTGVSMKIEMKEFDDIGAANVKIDDDFEVL 434
>gi|410206608|gb|JAA00523.1| ATG4 autophagy related 4 homolog B [Pan troglodytes]
gi|410247746|gb|JAA11840.1| ATG4 autophagy related 4 homolog B [Pan troglodytes]
gi|410295834|gb|JAA26517.1| ATG4 autophagy related 4 homolog B [Pan troglodytes]
gi|410352839|gb|JAA43023.1| ATG4 autophagy related 4 homolog B [Pan troglodytes]
Length = 393
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F CKTE+DF+ C Q++ L P+FEL+E
Sbjct: 296 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFSDWCQQVKKLSLLGGALPMFELVEQ- 354
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 355 ---------QPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 391
>gi|18181958|dbj|BAB83890.1| Apg4B [Homo sapiens]
Length = 392
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R+ I ++DPSIAV F CKTE+DF C Q++ L P+FEL+E
Sbjct: 295 DESFHCQHPPCRMSIANLDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVEQ- 353
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 354 ---------QPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 390
>gi|345307034|ref|XP_001513122.2| PREDICTED: cysteine protease ATG4B-like [Ornithorhynchus anatinus]
Length = 461
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R++I+ +DPSIAV F CKTE DF C Q++ L P+FEL+E
Sbjct: 364 DESFHCQHPPCRMNIVELDPSIAVGFFCKTEEDFNDWCQQVKKLSLIRGALPMFELVEH- 422
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+ + S R+ + D+DFE L
Sbjct: 423 ---------QPSHFSSPDVLNLSLDSSDAERLERFFDSEDEDFEIL 459
>gi|402593880|gb|EJW87807.1| hypothetical protein WUBG_01286, partial [Wuchereria bancrofti]
Length = 216
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ-PLFELIEDPI 78
DSTYHCP I +DPS+A+ F C TE+D+ L ++R L P PLFE++E
Sbjct: 121 DSTYHCPFILSTKIDKVDPSLALGFFCHTEDDYNELAKRLRTHLLPASTPPLFEMLETRP 180
Query: 79 EDWTPTQP 86
+++ P P
Sbjct: 181 KNFPPFVP 188
>gi|297669945|ref|XP_002813144.1| PREDICTED: cysteine protease ATG4B isoform 3 [Pongo abelii]
Length = 378
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F CKTE+DF+ C Q++ L P+FEL+E
Sbjct: 281 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFSDWCQQVKKLSLLGGALPMFELVEQ- 339
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 340 ---------QPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 376
>gi|348577273|ref|XP_003474409.1| PREDICTED: cysteine protease ATG4B [Cavia porcellus]
Length = 412
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D T+HC R+ I +DPSIAV F CKTE+DF C Q++ L P+FEL+E
Sbjct: 315 DETFHCQHPPCRMGIGELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVEQ- 373
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 374 ---------QPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 410
>gi|343961553|dbj|BAK62366.1| cysteine protease ATG4B [Pan troglodytes]
Length = 393
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F CKTE+DF+ C Q++ L P+FEL+E
Sbjct: 296 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFSDWCQQVKKLSLLGCALPMFELVEQ- 354
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 355 ---------QPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 391
>gi|440901286|gb|ELR52261.1| Cysteine protease ATG4B, partial [Bos grunniens mutus]
Length = 393
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F C+TE+DF C Q+R L P+FEL+E
Sbjct: 296 DESFHCQHPPGRMSIAELDPSIAVGFFCETEDDFNDWCQQVRKLSLLGGALPMFELVEQ- 354
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 355 ---------QPSHLACPDVLNLSLDSSDAERLERFFDSEDEDFEIL 391
>gi|187282046|ref|NP_001119770.1| uncharacterized protein LOC678769 [Rattus norvegicus]
gi|169642267|gb|AAI60890.1| LOC678769 protein [Rattus norvegicus]
Length = 406
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVC-------FLCKTENDFASLCSQIRAELRPEQQPLF 71
D T+HC Q+ R+ IL++DPS+A+ F CK E DF + CS ++ E+ E +F
Sbjct: 298 DHTFHCLQSPQRMSILNLDPSVALVGQGAFMGFFCKEEKDFDNWCSLVQKEILKENLRMF 357
Query: 72 ELIEDPIEDWTPTQP 86
EL++ W P P
Sbjct: 358 ELVQKHPSHWPPFVP 372
>gi|5262636|emb|CAB45756.1| hypothetical protein [Homo sapiens]
gi|12653857|gb|AAH00719.1| ATG4 autophagy related 4 homolog B (S. cerevisiae) [Homo sapiens]
gi|27763981|emb|CAD43219.1| autophagin-1 [Homo sapiens]
gi|117646318|emb|CAL38626.1| hypothetical protein [synthetic construct]
gi|119591687|gb|EAW71281.1| ATG4 autophagy related 4 homolog B (S. cerevisiae), isoform CRA_d
[Homo sapiens]
gi|123981932|gb|ABM82795.1| ATG4 autophagy related 4 homolog B (S. cerevisiae) [synthetic
construct]
gi|168273130|dbj|BAG10404.1| ATG4 autophagy related 4 homolog B [synthetic construct]
Length = 393
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F CKTE+DF C Q++ L P+FEL+E
Sbjct: 296 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVEQ- 354
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 355 ---------QPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 391
>gi|71891691|dbj|BAA76787.2| KIAA0943 protein [Homo sapiens]
Length = 396
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F CKTE+DF C Q++ L P+FEL+E
Sbjct: 299 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVEQ- 357
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 358 ---------QPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 394
>gi|90077212|dbj|BAE88286.1| unnamed protein product [Macaca fascicularis]
Length = 393
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F CKTE+DF C Q++ L P+FEL+E
Sbjct: 296 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVEQ- 354
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 355 ---------QPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 391
>gi|88192732|pdb|2D1I|A Chain A, Structure Of Human Atg4b
gi|88192733|pdb|2D1I|B Chain B, Structure Of Human Atg4b
Length = 398
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F CKTE+DF C Q++ L P+FEL+E
Sbjct: 301 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVEQ- 359
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 360 ---------QPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 396
>gi|380808290|gb|AFE76020.1| cysteine protease ATG4B isoform a [Macaca mulatta]
gi|383416899|gb|AFH31663.1| cysteine protease ATG4B isoform a [Macaca mulatta]
gi|384941198|gb|AFI34204.1| cysteine protease ATG4B isoform a [Macaca mulatta]
Length = 393
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F CKTE+DF C Q++ L P+FEL+E
Sbjct: 296 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVEQ- 354
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 355 ---------QPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 391
>gi|308490628|ref|XP_003107506.1| CRE-ATG-4.1 protein [Caenorhabditis remanei]
gi|308251874|gb|EFO95826.1| CRE-ATG-4.1 protein [Caenorhabditis remanei]
Length = 478
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 14/108 (12%)
Query: 20 DSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ-PLFELIEDPI 78
DSTYHC + +DPS+A+ C+T DF +LC +++ P P+FE +E
Sbjct: 364 DSTYHCQMMQWMEYESIDPSLALALFCETRQDFDTLCEELQKTTLPSSVPPMFEFLEK-- 421
Query: 79 EDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGS---DDDFEFL 123
RP L + SM+ + + +G + DDDFE L
Sbjct: 422 --------RPRYLPRFEPYTGVSMKIEMKEFDDIGAANVKIDDDFEVL 461
>gi|355565356|gb|EHH21845.1| hypothetical protein EGK_04999, partial [Macaca mulatta]
Length = 393
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F CKTE+DF C Q++ L P+FEL+E
Sbjct: 296 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVEQ- 354
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 355 ---------QPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 391
>gi|78101773|pdb|2CY7|A Chain A, The Crystal Structure Of Human Atg4b
Length = 396
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F CKTE+DF C Q++ L P+FEL+E
Sbjct: 299 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVEQ- 357
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 358 ---------QPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 394
>gi|417410350|gb|JAA51650.1| Putative cysteine protease required for autophagy, partial
[Desmodus rotundus]
Length = 394
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC SR+ I +DPSIAV F C+TE+DF C Q++ L P+FEL+E
Sbjct: 297 DESFHCQHPPSRMSIGELDPSIAVGFFCETEDDFGDWCQQVKKLSLLGGALPMFELVEQ- 355
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 356 ---------QPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 392
>gi|410036440|ref|XP_003309622.2| PREDICTED: cysteine protease ATG4B isoform 5 [Pan troglodytes]
Length = 509
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQAS-RLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F CKTE+DF+ C Q++ L P+FEL+E
Sbjct: 412 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFSDWCQQVKKLSLLGGALPMFELVEQ- 470
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 471 ---------QPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 507
>gi|355669955|gb|AER94692.1| ATG4 autophagy related 4-like protein B [Mustela putorius furo]
Length = 390
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 52/106 (49%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIR-AELRPEQQPLFELIEDP 77
D ++HC SR+ I +DPSIAV F CKTE+DF C ++R L P+FEL+E
Sbjct: 293 DESFHCRHPPSRMGISELDPSIAVGFFCKTEDDFDDWCQRVRQLSLLGGALPMFELVEQ- 351
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 352 ---------QPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 388
>gi|90080692|dbj|BAE89827.1| unnamed protein product [Macaca fascicularis]
Length = 263
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F CKTE+DF C Q++ L P+FEL+E
Sbjct: 166 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVEQ- 224
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 225 ---------QPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 261
>gi|397483837|ref|XP_003813097.1| PREDICTED: cysteine protease ATG4B isoform 4 [Pan paniscus]
Length = 379
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F CKTE+DF C Q++ L P+FEL+E
Sbjct: 282 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVEQ- 340
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 341 ---------QPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 377
>gi|426339167|ref|XP_004033531.1| PREDICTED: cysteine protease ATG4B isoform 1 [Gorilla gorilla
gorilla]
gi|426339169|ref|XP_004033532.1| PREDICTED: cysteine protease ATG4B isoform 2 [Gorilla gorilla
gorilla]
gi|221045722|dbj|BAH14538.1| unnamed protein product [Homo sapiens]
Length = 319
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F CKTE+DF C Q++ L P+FEL+E
Sbjct: 222 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVEQ- 280
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 281 ---------QPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 317
>gi|149711769|ref|XP_001497815.1| PREDICTED: cysteine protease ATG4B [Equus caballus]
Length = 393
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC SR+ I +DPSIAV F CKTE+DF C Q+ L P+FEL+E
Sbjct: 296 DESFHCQHPPSRMSIGELDPSIAVGFFCKTEDDFNDWCQQVTMLSLLGGALPMFELVEQ- 354
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 355 ---------QPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 391
>gi|403291503|ref|XP_003936827.1| PREDICTED: cysteine protease ATG4B [Saimiri boliviensis
boliviensis]
Length = 319
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F CKTE+DF C Q++ L P+FEL+E
Sbjct: 222 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVEQ- 280
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 281 ---------QPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 317
>gi|296206033|ref|XP_002750034.1| PREDICTED: cysteine protease ATG4B isoform 2 [Callithrix jacchus]
Length = 319
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F CKTE+DF C Q++ L P+FEL+E
Sbjct: 222 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVEQ- 280
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 281 ---------QPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 317
>gi|426339171|ref|XP_004033533.1| PREDICTED: cysteine protease ATG4B isoform 3 [Gorilla gorilla
gorilla]
Length = 379
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F CKTE+DF C Q++ L P+FEL+E
Sbjct: 282 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVEQ- 340
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 341 ---------QPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 377
>gi|327277326|ref|XP_003223416.1| PREDICTED: cysteine protease ATG4A-like [Anolis carolinensis]
Length = 385
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
Query: 10 DKEQDSEKKLDSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ 68
D E++S D ++HC QA R+ I+++DPS+A+ F CK E DF + CS ++ E+ +Q
Sbjct: 276 DSEENSTVD-DRSFHCQQAPHRMKIMNLDPSVALGFFCKEEKDFDTWCSLVQKEIHKQQS 334
Query: 69 -PLFELIE 75
+FELI+
Sbjct: 335 LRMFELIQ 342
>gi|298231123|ref|NP_001177212.1| cysteine protease ATG4B [Sus scrofa]
gi|296874484|gb|ADH81747.1| autophagy related 4-like protein B [Sus scrofa]
Length = 393
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 50/106 (47%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F C+TE DF C Q+R L P+FEL+E
Sbjct: 296 DESFHCQHPPHRMSIAELDPSIAVGFFCQTEEDFNDWCQQVRKLSLLGGALPMFELVEQ- 354
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 355 ---------QPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 391
>gi|47132611|ref|NP_037457.3| cysteine protease ATG4B isoform a [Homo sapiens]
gi|296434400|sp|Q9Y4P1.2|ATG4B_HUMAN RecName: Full=Cysteine protease ATG4B; AltName: Full=AUT-like 1
cysteine endopeptidase; AltName: Full=Autophagin-1;
AltName: Full=Autophagy-related cysteine endopeptidase
1; AltName: Full=Autophagy-related protein 4 homolog B;
Short=hAPG4B
gi|62822370|gb|AAY14919.1| unknown [Homo sapiens]
Length = 393
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F CKTE+DF C Q++ L P+FEL+E
Sbjct: 296 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVE-- 353
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 354 --------LQPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 391
>gi|397483831|ref|XP_003813094.1| PREDICTED: cysteine protease ATG4B isoform 1 [Pan paniscus]
Length = 481
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F CKTE+DF C Q++ L P+FEL+E
Sbjct: 384 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVEQ- 442
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 443 ---------QPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 479
>gi|194381088|dbj|BAG64112.1| unnamed protein product [Homo sapiens]
Length = 510
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F CKTE+DF C Q++ L P+FEL+E
Sbjct: 413 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVEQ- 471
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 472 ---------QPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 508
>gi|402889930|ref|XP_003908250.1| PREDICTED: cysteine protease ATG4B [Papio anubis]
Length = 508
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQAS-RLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F CKTE+DF C Q++ L P+FEL+E
Sbjct: 411 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVEQ- 469
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 470 ---------QPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 506
>gi|334350077|ref|XP_001376474.2| PREDICTED: cysteine protease ATG4A-like [Monodelphis domestica]
Length = 417
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 10 DKEQDSEKKLDSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAE-LRPEQ 67
D E+D D ++HC Q+ R+ IL++DPS+A+ F K E DF + C ++ E L+P+
Sbjct: 308 DSEEDGTVD-DQSFHCQQSPHRMQILNLDPSVALGFFFKEEEDFDNWCRLVQKEILKPQS 366
Query: 68 QPLFELIEDPIEDWTPTQP 86
+FEL++ W P P
Sbjct: 367 LQMFELVQKHPAHWPPFIP 385
>gi|194384462|dbj|BAG59391.1| unnamed protein product [Homo sapiens]
Length = 319
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F CKTE+DF C Q++ L P+FEL+E
Sbjct: 222 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVE-- 279
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 280 --------LQPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 317
>gi|126338580|ref|XP_001366892.1| PREDICTED: cysteine protease ATG4B-like [Monodelphis domestica]
Length = 396
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR-PEQQPLFELIEDP 77
D ++HC R++I +DPSIAV F CK+E DF C Q++ R P P+FEL+E
Sbjct: 299 DESFHCQHPPCRMNIGELDPSIAVGFFCKSEEDFNDWCQQVKKLSRIPGALPMFELVEH- 357
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+ + S R+ + D+DFE L
Sbjct: 358 ---------QPSHFSCPDVLNLSLDSSDVERLERFFDSEDEDFEIL 394
>gi|47564102|ref|NP_001001170.1| cysteine protease ATG4B [Bos taurus]
gi|61211780|sp|Q6PZ03.1|ATG4B_BOVIN RecName: Full=Cysteine protease ATG4B; AltName:
Full=Autophagy-related cysteine endopeptidase 2B;
Short=Autophagin-2B; AltName: Full=Autophagy-related
protein 4 homolog B; AltName: Full=bAut2B
gi|45861660|gb|AAS78583.1| Aut2b2 [Bos taurus]
Length = 393
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQI-RAELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F C+TE+DF C Q+ + L P+FEL+E
Sbjct: 296 DESFHCQHPPGRMSIAELDPSIAVGFFCETEDDFNDWCQQVSKLSLLGGALPMFELVEQ- 354
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 355 ---------QPSHLACPDVLNLSLDSSDAERLERFFDSEDEDFEIL 391
>gi|281340990|gb|EFB16574.1| hypothetical protein PANDA_012287 [Ailuropoda melanoleuca]
Length = 369
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 14 DSEKKLDSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIR-AELRPEQQPLF 71
DS D ++HC SR+ I +DPSIAV F CKTE+DF C Q+R L P+F
Sbjct: 287 DSCFIADESFHCRHPPSRMSIGELDPSIAVGFFCKTEDDFDDWCQQVRQLSLLGGALPMF 346
Query: 72 ELIE 75
EL+E
Sbjct: 347 ELVE 350
>gi|426218487|ref|XP_004003478.1| PREDICTED: LOW QUALITY PROTEIN: cysteine protease ATG4B [Ovis
aries]
Length = 454
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIE 75
D ++HC R+ I +DPSIAV F CKTE+DF C Q+R L P+FEL+E
Sbjct: 327 DESFHCQHPPGRMSITELDPSIAVGFFCKTEDDFNDWCQQVRKLSLLGGALPMFELVE 384
>gi|449498615|ref|XP_002197397.2| PREDICTED: cysteine protease ATG4A [Taeniopygia guttata]
Length = 412
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ-PLFELIE 75
D ++HC QA R+ I+++DPS+A+ F CK E DF + CS ++ E+ +Q +FEL++
Sbjct: 297 DKSFHCQQAPHRMKIMNLDPSVALGFFCKEECDFDNWCSLVQKEILKQQSLRMFELVQ 354
>gi|326924562|ref|XP_003208495.1| PREDICTED: cysteine protease ATG4A-like, partial [Meleagris
gallopavo]
Length = 421
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ-PLFELIE 75
D ++HC QA R+ I+++DPS+A+ F CK E DF + CS ++ E+ +Q +FEL++
Sbjct: 321 DQSFHCQQAPHRMKIMNLDPSVALGFFCKEECDFDNWCSLVQKEILKQQSLQMFELVQ 378
>gi|268570274|ref|XP_002640735.1| Hypothetical protein CBG19805 [Caenorhabditis briggsae]
Length = 481
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 14/111 (12%)
Query: 17 KKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQI-RAELRPEQQPLFELIE 75
K DSTYHC + +DPS+A+ C+T +F +LC ++ + L P+FE +E
Sbjct: 366 KMNDSTYHCQMMQWMEYDSIDPSLALALFCETREEFENLCDELQKTTLTASNPPMFEFLE 425
Query: 76 DPIEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGS---DDDFEFL 123
RP L + SM+ + + +G + D+DFE L
Sbjct: 426 ----------KRPKYLPKFEPYTGVSMKIEMKEFDDIGAANSKIDEDFEVL 466
>gi|410036442|ref|XP_003950065.1| PREDICTED: cysteine protease ATG4B [Pan troglodytes]
Length = 521
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIE 75
D ++HC R+ I +DPSIAV F CKTE+DF+ C Q++ L P+FEL+E
Sbjct: 412 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFSDWCQQVKKLSLLGGALPMFELVE 469
>gi|291415044|ref|XP_002723769.1| PREDICTED: APG4 autophagy 4 homolog B [Oryctolagus cuniculus]
Length = 473
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 49/106 (46%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F CKTE DF C Q+R L P+FEL+E
Sbjct: 376 DESFHCQHPPCRMSIGELDPSIAVGFFCKTEEDFNDWCQQVRKLSLLGGALPMFELVEQ- 434
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+P +L + S R+ + D+DFE L
Sbjct: 435 ---------QPPHLACPDVLNLSLESSDVERLERFFDSEDEDFEIL 471
>gi|193784751|dbj|BAG53904.1| unnamed protein product [Homo sapiens]
Length = 146
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 51/107 (47%), Gaps = 12/107 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F CKTE+DF C Q++ L P+FEL+E
Sbjct: 49 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVE-- 106
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFLG 124
+PS+L + S R+ + D+DFE L
Sbjct: 107 --------LQPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEILS 145
>gi|449273759|gb|EMC83168.1| Cysteine protease ATG4A, partial [Columba livia]
Length = 395
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ-PLFELIE 75
D ++HC QA R+ I+++DPS+A+ F CK E DF + CS ++ E+ +Q +FEL++
Sbjct: 295 DESFHCQQAPHRMKIMNLDPSVALGFFCKEECDFDNWCSLVQKEILKQQSLRMFELVQ 352
>gi|431822415|ref|NP_001258915.1| cysteine protease ATG4A isoform 1 [Gallus gallus]
Length = 397
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ-PLFELIE 75
D ++HC QA R+ I+++DPS+A+ F CK E DF + CS ++ E+ +Q +FEL++
Sbjct: 297 DQSFHCQQAPHRMKIMNLDPSVALGFFCKEECDFDNWCSLVQKEILKQQSLRMFELVQ 354
>gi|61211813|sp|Q8BGE6.2|ATG4B_MOUSE RecName: Full=Cysteine protease ATG4B; AltName: Full=AUT-like 1
cysteine endopeptidase; AltName: Full=Autophagin-1;
AltName: Full=Autophagy-related cysteine endopeptidase
1; AltName: Full=Autophagy-related protein 4 homolog B
Length = 393
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR-PEQQPLFELIEDP 77
D ++HC SR+ I +DPSIAV F CKTE DF C Q++ + P+FEL+E
Sbjct: 296 DESFHCQHPPSRMGIGELDPSIAVGFFCKTEEDFNDWCQQVKKLSQLGGALPMFELVEQ- 354
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 355 ---------QPSHLACQDVLNLSLDSSDVERLERFFDSEDEDFEIL 391
>gi|27883848|ref|NP_777363.1| cysteine protease ATG4B [Mus musculus]
gi|26324650|dbj|BAC26079.1| unnamed protein product [Mus musculus]
gi|26327423|dbj|BAC27455.1| unnamed protein product [Mus musculus]
gi|26344632|dbj|BAC35965.1| unnamed protein product [Mus musculus]
gi|27763983|emb|CAD43220.1| autophagin-1 [Mus musculus]
Length = 393
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR-PEQQPLFELIEDP 77
D ++HC SR+ I +DPSIAV F CKTE DF C Q++ + P+FEL+E
Sbjct: 296 DESFHCQHPPSRMGIGELDPSIAVGFFCKTEEDFNDWCQQVKKLSQLGGALPMFELVEQ- 354
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 355 ---------QPSHLACQDVLNLSLDSSDVERLERFFDSEDEDFEIL 391
>gi|410969807|ref|XP_003991383.1| PREDICTED: cysteine protease ATG4B [Felis catus]
Length = 445
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC SR+ + +DPSIAV F C+TE DF C ++R L P+FEL+E
Sbjct: 348 DESFHCQHPPSRMGVRELDPSIAVGFFCQTEEDFDDWCQRVRKLSLLGGALPMFELVEQ- 406
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 407 ---------QPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 443
>gi|431822417|ref|NP_001258916.1| cysteine protease ATG4A isoform 2 [Gallus gallus]
gi|61211756|sp|Q5ZIW7.1|ATG4A_CHICK RecName: Full=Cysteine protease ATG4A; AltName:
Full=Autophagy-related protein 4 homolog A
gi|53134379|emb|CAG32326.1| hypothetical protein RCJMB04_23b20 [Gallus gallus]
Length = 380
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ-PLFELIE 75
D ++HC QA R+ I+++DPS+A+ F CK E DF + CS ++ E+ +Q +FEL++
Sbjct: 280 DQSFHCQQAPHRMKIMNLDPSVALGFFCKEECDFDNWCSLVQKEILKQQSLRMFELVQ 337
>gi|332815902|ref|XP_001162556.2| PREDICTED: cysteine protease ATG4B isoform 1 [Pan troglodytes]
Length = 496
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIE 75
D ++HC R+ I +DPSIAV F CKTE+DF+ C Q++ L P+FEL+E
Sbjct: 412 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFSDWCQQVKKLSLLGGALPMFELVE 469
>gi|395733089|ref|XP_002813143.2| PREDICTED: cysteine protease ATG4B isoform 2 [Pongo abelii]
Length = 331
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 4/108 (3%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F CKTE+DF+ C Q++ L P+FEL+E
Sbjct: 222 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFSDWCQQVKKLSLLGGALPMFELVEQQ 281
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSM--RRQPRRVSGVGEGSDDDFEFL 123
+LG + S+ R+ + D+DFE L
Sbjct: 282 PSHLACPDVLNLSLGESCQVQVGSLGDSSDVERLERFFDSEDEDFEIL 329
>gi|296488734|tpg|DAA30847.1| TPA: cysteine protease ATG4B [Bos taurus]
Length = 390
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 12/105 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQI-RAELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F C+TE+DF C Q+ + L P+FEL+E
Sbjct: 296 DESFHCQHPPGRMSIAELDPSIAVGFFCETEDDFNDWCQQVSKLSLLGGALPMFELVEQ- 354
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEF 122
+PS+L + S R+ + D+DFE
Sbjct: 355 ---------QPSHLACPDVLNLSLDSSDAERLERFFDSEDEDFEI 390
>gi|47212536|emb|CAF90552.1| unnamed protein product [Tetraodon nigroviridis]
Length = 366
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQI-RAELRPEQQPLFELIEDP 77
D +YHC R+HI +DPSIA F C+TE++F C +I R + P+FEL+E
Sbjct: 269 DDSYHCQHPPCRMHICELDPSIAAGFFCRTEDEFDDWCMRIRRLSCNRDNLPMFELVES- 327
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS++ + + + R+ D++FE L
Sbjct: 328 ---------QPSHMVSVDAINLTPDFSDSERLERFFYSEDEEFEIL 364
>gi|224510547|pdb|2ZZP|A Chain A, The Crystal Structure Of Human Atg4b(C74s)- Lc3(1-124)
Complex
Length = 357
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIE 75
D ++HC R+ I +DPSIAV F CKTE+DF C Q++ L P+FEL+E
Sbjct: 299 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVE 356
>gi|149244060|pdb|2Z0D|A Chain A, The Crystal Structure Of Human Atg4b- Lc3(1-120) Complex
gi|149244062|pdb|2Z0E|A Chain A, The Crystal Structure Of Human Atg4b- Lc3(1-124) Complex
Length = 357
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIE 75
D ++HC R+ I +DPSIAV F CKTE+DF C Q++ L P+FEL+E
Sbjct: 299 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVE 356
>gi|449266947|gb|EMC77925.1| Cysteine protease ATG4B, partial [Columba livia]
Length = 393
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F C TE DF C QI+ L P+FEL+E
Sbjct: 296 DESFHCQHPPCRMSIAELDPSIAVGFFCNTEEDFNDWCQQIKKLSLVRAALPMFELVER- 354
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+ + + R+ + D+DFE L
Sbjct: 355 ---------QPSHFSNPDVLNLTPDSSDADRLERFFDSEDEDFEIL 391
>gi|66773074|ref|NP_001019605.1| cysteine protease ATG4A [Danio rerio]
gi|66267494|gb|AAH95617.1| Zgc:111958 [Danio rerio]
Length = 375
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAE-LRPEQQPLFELIEDP 77
D ++HC + R+ I +DPS+A+ F CK+E DF S C ++ E L+ +FEL+E
Sbjct: 275 DQSFHCQRTPHRMKITSLDPSVALGFFCKSEEDFDSWCDLVQQELLKKRNLRMFELVEKH 334
Query: 78 IEDWTPTQP 86
W P P
Sbjct: 335 PSHWPPFVP 343
>gi|397483835|ref|XP_003813096.1| PREDICTED: cysteine protease ATG4B isoform 3 [Pan paniscus]
Length = 405
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIE 75
D ++HC R+ I +DPSIAV F CKTE+DF C Q++ L P+FEL+E
Sbjct: 296 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVE 353
>gi|397483833|ref|XP_003813095.1| PREDICTED: cysteine protease ATG4B isoform 2 [Pan paniscus]
Length = 468
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIE 75
D ++HC R+ I +DPSIAV F CKTE+DF C Q++ L P+FEL+E
Sbjct: 384 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVE 441
>gi|34531319|dbj|BAC86110.1| unnamed protein product [Homo sapiens]
Length = 468
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIE 75
D ++HC R+ I +DPSIAV F CKTE+DF C Q++ L P+FEL+E
Sbjct: 384 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVE 441
>gi|198417051|ref|XP_002128504.1| PREDICTED: similar to autophagy-related cysteine endopeptidase 2
[Ciona intestinalis]
Length = 422
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 15 SEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR-PEQQPLFEL 73
+E+ D+T+HC R+ + ++DPS+A+ F+C T F LC +++ ++ P PLFE+
Sbjct: 310 NERYDDTTFHCDTPGRMLLTNLDPSLALGFICTTRGSFCDLCHKVKQMVKTPTSFPLFEV 369
Query: 74 IE 75
++
Sbjct: 370 VD 371
>gi|14042685|dbj|BAB55353.1| unnamed protein product [Homo sapiens]
Length = 380
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIE 75
D ++HC R+ I +DPSIAV F CKTE+DF C Q++ L P+FEL+E
Sbjct: 296 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVE 353
>gi|30410798|ref|NP_847896.1| cysteine protease ATG4B isoform b [Homo sapiens]
Length = 380
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIE 75
D ++HC R+ I +DPSIAV F CKTE+DF C Q++ L P+FEL+E
Sbjct: 296 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVE 353
>gi|213513159|ref|NP_001133247.1| cysteine protease ATG4B [Salmo salar]
gi|209147572|gb|ACI32896.1| Cysteine protease ATG4B [Salmo salar]
gi|223647372|gb|ACN10444.1| Cysteine protease ATG4B [Salmo salar]
Length = 397
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQ-QPLFELIE 75
D TYHC R+HI +DPSIAV F C+TE+DF C + R P+FEL++
Sbjct: 299 DDTYHCQHPPCRMHICEIDPSIAVGFFCRTEDDFDDWCMRFRKLSHTRAGLPMFELVD 356
>gi|119591684|gb|EAW71278.1| ATG4 autophagy related 4 homolog B (S. cerevisiae), isoform CRA_a
[Homo sapiens]
Length = 415
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIE 75
D ++HC R+ I +DPSIAV F CKTE+DF C Q++ L P+FEL+E
Sbjct: 296 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVE 353
>gi|119591685|gb|EAW71279.1| ATG4 autophagy related 4 homolog B (S. cerevisiae), isoform CRA_b
[Homo sapiens]
Length = 331
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F CKTE+DF C Q++ L P+FEL+E
Sbjct: 222 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVEQQ 281
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSM--RRQPRRVSGVGEGSDDDFEFL 123
+LG + S+ R+ + D+DFE L
Sbjct: 282 PSHLACPDVLNLSLGESCQVQVGSLGDSSDVERLERFFDSEDEDFEIL 329
>gi|225718596|gb|ACO15144.1| Cysteine protease ATG4B [Caligus clemensi]
Length = 390
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Query: 20 DSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAEL-RPEQQPLFELIEDPI 78
D T+H +A R+ +DPS+++CFLC+ E++F +C + +L R PLFE+
Sbjct: 284 DQTHHTERAYRMDFKDLDPSLSLCFLCRNESEFEDMCERFLFKLIRGHNSPLFEICRQRP 343
Query: 79 EDWTPTQPRPSNLGG---TSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
E P P S+L + P + V + SD++FE L
Sbjct: 344 EHLMPL-PLSSSLNSDLPNAVPEEVKCAKDFVEVKRALDTSDEEFEIL 390
>gi|14042153|dbj|BAB55127.1| unnamed protein product [Homo sapiens]
Length = 331
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIE 75
D ++HC R+ I +DPSIAV F CKTE+DF C Q++ L P+FEL+E
Sbjct: 222 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVE 279
>gi|348513452|ref|XP_003444256.1| PREDICTED: cysteine protease ATG4B-like [Oreochromis niloticus]
Length = 391
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQI-RAELRPEQQPLFELIEDP 77
D TYHC R+HI +DPSIA F C+TE++F C +I R P+FEL++
Sbjct: 294 DETYHCQHPPCRMHICELDPSIAAGFFCRTEDEFDDWCMRIRRLSCNRGTLPMFELVDS- 352
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS++ + + + R+ + D++FE L
Sbjct: 353 ---------QPSHMVSVDTLNLTPDFSDSDRLERFFDSEDEEFEIL 389
>gi|195995623|ref|XP_002107680.1| hypothetical protein TRIADDRAFT_20340 [Trichoplax adhaerens]
gi|190588456|gb|EDV28478.1| hypothetical protein TRIADDRAFT_20340 [Trichoplax adhaerens]
Length = 385
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 20 DSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIR--AELRPEQQPLFELIEDP 77
D TYH +RLH +MDPS+A+ F TE +F LC L Q PLFE++E
Sbjct: 287 DKTYHQKGTNRLHFSYMDPSVALGFYSATEEEFNELCRDFTDVCILNSAQPPLFEVVEQR 346
Query: 78 IEDW 81
W
Sbjct: 347 PPHW 350
>gi|432853687|ref|XP_004067831.1| PREDICTED: cysteine protease ATG4B-like [Oryzias latipes]
Length = 390
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D TYHC R+HI +DPSIA F C+TE++F C +IR + P+FEL++
Sbjct: 293 DETYHCQHPPCRMHICELDPSIAAGFFCRTEDEFDDWCMRIRGLSCKRGGLPMFELVDS- 351
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+P+++ + + + R+ + D++FE L
Sbjct: 352 ---------QPTHMVSVDALNLTPDFSDSDRLERFFDSEDEEFEIL 388
>gi|224059752|ref|XP_002193231.1| PREDICTED: cysteine protease ATG4B [Taeniopygia guttata]
Length = 393
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F C TE DF C QI+ L P+FEL+E
Sbjct: 296 DESFHCQHPPCRMSIAELDPSIAVGFFCNTEADFNDWCQQIKKLSLVRGALPMFELVER- 354
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+ + + R+ + D+DFE L
Sbjct: 355 ---------QPSHFSNPDVLNLTPDSSDADRLERFFDSEDEDFEIL 391
>gi|148228573|ref|NP_001085611.1| cysteine protease ATG4A [Xenopus laevis]
gi|61211771|sp|Q6GPU1.1|ATG4A_XENLA RecName: Full=Cysteine protease ATG4A; AltName:
Full=Autophagy-related protein 4 homolog A
gi|49115669|gb|AAH73017.1| MGC82614 protein [Xenopus laevis]
Length = 397
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ-PLFEL 73
D TYHC + + + +L++DPS+A+ F CK ENDF + C I E+ Q +FEL
Sbjct: 297 DQTYHCQKGPNSMKVLNLDPSVALGFFCKDENDFNNWCEVIEKEILKHQSLRMFEL 352
>gi|170036509|ref|XP_001846106.1| Autophagy-specific protein [Culex quinquefasciatus]
gi|167879174|gb|EDS42557.1| Autophagy-specific protein [Culex quinquefasciatus]
Length = 379
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 3 TGHIGVYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAE 62
+G+IG DK E+++D ++H A R++ MDPS+A+CFLC T +F L ++ +
Sbjct: 250 SGNIG--DKTGLDEREMDESFHQRYARRINFKAMDPSLALCFLCATRTEFDDLLARFAED 307
Query: 63 LRPEQ-QPLFELIEDPIEDW 81
L Q LFE+ + W
Sbjct: 308 LNGGSCQGLFEVTKTRQAPW 327
>gi|326925776|ref|XP_003209085.1| PREDICTED: cysteine protease ATG4B-like [Meleagris gallopavo]
Length = 393
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F C TE DF C QI+ L P+FEL+E
Sbjct: 296 DESFHCQHPPCRMSIAELDPSIAVGFFCHTEEDFNDWCHQIKKLSLVRGALPMFELVER- 354
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+ + + R+ + D+DFE L
Sbjct: 355 ---------QPSHFSNPDVLNLTPDSSDADRLERFFDSEDEDFEIL 391
>gi|20071131|gb|AAH27184.1| Autophagy-related 4B (yeast) [Mus musculus]
gi|26353914|dbj|BAC40587.1| unnamed protein product [Mus musculus]
gi|74188242|dbj|BAE25791.1| unnamed protein product [Mus musculus]
Length = 393
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR-PEQQPLFELIEDP 77
D ++HC SR+ I +DPSIAV F CK E DF C Q++ + P+FEL+E
Sbjct: 296 DESFHCQHPPSRMGIGELDPSIAVGFFCKKEEDFNDWCQQVKKLSQLGGALPMFELVEQ- 354
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 355 ---------QPSHLACQDVLNLSLDSSDVERLERFFDSEDEDFEIL 391
>gi|148707985|gb|EDL39932.1| autophagy-related 4B (yeast), isoform CRA_a [Mus musculus]
Length = 390
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR-PEQQPLFELIEDP 77
D ++HC SR+ I +DPSIAV F CK E DF C Q++ + P+FEL+E
Sbjct: 293 DESFHCQHPPSRMGIGELDPSIAVGFFCKKEEDFNDWCQQVKKLSQLGGALPMFELVEQ- 351
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 352 ---------QPSHLACQDVLNLSLDSSDVERLERFFDSEDEDFEIL 388
>gi|194389756|dbj|BAG60394.1| unnamed protein product [Homo sapiens]
Length = 379
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV CKTE+DF C Q++ L P+FEL+E
Sbjct: 282 DESFHCQHPPCRMSIAELDPSIAVGSFCKTEDDFNDWCQQVKKLSLLGGALPMFELVEQ- 340
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 341 ---------QPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 377
>gi|47087191|ref|NP_998738.1| cysteine protease ATG4B [Gallus gallus]
gi|61211779|sp|Q6PZ02.1|ATG4B_CHICK RecName: Full=Cysteine protease ATG4B; AltName:
Full=Autophagy-related cysteine endopeptidase 2B;
Short=Autophagin-2B; Short=cAut2B; AltName:
Full=Autophagy-related protein 4 homolog B
gi|45861662|gb|AAS78584.1| AUT2B [Gallus gallus]
Length = 393
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F C TE DF C QI+ L P+FEL+E
Sbjct: 296 DESFHCQHPPCRMSIAELDPSIAVGFFCHTEEDFNDWCHQIKKLSLVRGALPMFELVER- 354
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+ + + R+ + D+DFE L
Sbjct: 355 ---------QPSHFSNPDVLNLTPDSSDADRLERFFDSEDEDFEIL 391
>gi|344239232|gb|EGV95335.1| Cysteine protease ATG4B [Cricetulus griseus]
Length = 394
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F C+TE DF C Q++ L P+FEL+E
Sbjct: 297 DESFHCQHPPCRMGIGELDPSIAVGFFCETEEDFNDWCQQVKKLSLLGGALPMFELVEQ- 355
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 356 ---------QPSHLVCQDVLNLSLDSSDVERLERFFDSEDEDFEIL 392
>gi|149037474|gb|EDL91905.1| autophagy-related 4B (yeast), isoform CRA_b [Rattus norvegicus]
Length = 319
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR-PEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F CKTE DF C Q++ + P+FEL+E
Sbjct: 222 DESFHCQHPPCRMGIGELDPSIAVGFFCKTEEDFNDWCQQVKKLSQLGGALPMFELVEQ- 280
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 281 ---------QPSHLACQDVLNLSLDSSDVERLERFFDSEDEDFEIL 317
>gi|354474222|ref|XP_003499330.1| PREDICTED: cysteine protease ATG4B-like [Cricetulus griseus]
Length = 479
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F C+TE DF C Q++ L P+FEL+E
Sbjct: 382 DESFHCQHPPCRMGIGELDPSIAVGFFCETEEDFNDWCQQVKKLSLLGGALPMFELVEQ- 440
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 441 ---------QPSHLVCQDVLNLSLDSSDVERLERFFDSEDEDFEIL 477
>gi|62860068|ref|NP_001016619.1| autophagy related 4A, cysteine peptidase [Xenopus (Silurana)
tropicalis]
gi|89269917|emb|CAJ81691.1| APG4 autophagy 4 homolog A (S. cerevisiae) [Xenopus (Silurana)
tropicalis]
gi|171846953|gb|AAI61565.1| ATG4 autophagy related 4 homolog A [Xenopus (Silurana) tropicalis]
gi|213625518|gb|AAI70776.1| ATG4 autophagy related 4 homolog A [Xenopus (Silurana) tropicalis]
gi|213627145|gb|AAI70802.1| ATG4 autophagy related 4 homolog A [Xenopus (Silurana) tropicalis]
Length = 395
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ-PLFEL 73
D TYHC + + + +L++DPS+A+ F CK ENDF + C I E+ Q +FEL
Sbjct: 295 DQTYHCQKGPNSMKVLNLDPSVALGFFCKDENDFDNWCEVIEKEILKHQSLRMFEL 350
>gi|213626921|gb|AAI70397.1| APG4A protein [Xenopus laevis]
Length = 395
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ-PLFELI 74
D TYHC + + + +L +DPS+A+ F CK EN+F + C I E+ Q +FELI
Sbjct: 295 DQTYHCQKGPNSMKVLKLDPSVALGFFCKDENEFNNWCEVIEKEILKHQSLRMFELI 351
>gi|163914473|ref|NP_001106295.1| APG4A protein [Xenopus laevis]
gi|161611704|gb|AAI55873.1| APG4A protein [Xenopus laevis]
Length = 395
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ-PLFELI 74
D TYHC + + + +L +DPS+A+ F CK EN+F + C I E+ Q +FELI
Sbjct: 295 DQTYHCQKGPNSMKVLKLDPSVALGFFCKDENEFNNWCEVIEKEILKHQSLRMFELI 351
>gi|50417810|gb|AAH78135.1| APG4A protein, partial [Xenopus laevis]
Length = 392
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ-PLFELI 74
D TYHC + + + +L +DPS+A+ F CK EN+F + C I E+ Q +FELI
Sbjct: 292 DQTYHCQKGPNSMKVLKLDPSVALGFFCKDENEFNNWCEVIEKEILKHQSLRMFELI 348
>gi|71043632|ref|NP_001020882.1| cysteine protease ATG4B [Rattus norvegicus]
gi|68533688|gb|AAH98833.1| ATG4 autophagy related 4 homolog B (S. cerevisiae) [Rattus
norvegicus]
Length = 224
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR-PEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F CKTE DF C Q++ + P+FEL+E
Sbjct: 127 DESFHCQHPPCRMGIGELDPSIAVGFFCKTEEDFNDWCQQVKKLSQLGGALPMFELVEQ- 185
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 186 ---------QPSHLACQDVLNLSLDSSDVERLERFFDSEDEDFEIL 222
>gi|324506823|gb|ADY42901.1| Cysteine protease ATG4B [Ascaris suum]
Length = 433
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ-PLFELIEDPI 78
DS+YHCP + DPS+A+ F+C+TE ++ L + ++ ++ P PLFEL+E
Sbjct: 338 DSSYHCPFLLHIAYDSADPSLALSFICRTEEEYEHLANNLKTKVLPASSPPLFELLETRP 397
Query: 79 EDWTPTQP 86
+ + P P
Sbjct: 398 KGFPPFVP 405
>gi|149030140|gb|EDL85217.1| rCG23129 [Rattus norvegicus]
Length = 90
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 31 LHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPIEDWTPTQP 86
+ IL++DPS+A+ F CK E DF + CS ++ E+ E +FEL++ W P P
Sbjct: 1 MSILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHPSHWPPFVP 56
>gi|37360148|dbj|BAC98052.1| mKIAA0943 protein [Mus musculus]
gi|148707989|gb|EDL39936.1| autophagy-related 4B (yeast), isoform CRA_d [Mus musculus]
Length = 266
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR-PEQQPLFELIEDP 77
D ++HC SR+ I +DPSIAV F CK E DF C Q++ + P+FEL+E
Sbjct: 169 DESFHCQHPPSRMGIGELDPSIAVGFFCKKEEDFNDWCQQVKKLSQLGGALPMFELVEQ- 227
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 228 ---------QPSHLACQDVLNLSLDSSDVERLERFFDSEDEDFEIL 264
>gi|440891575|gb|ELR45180.1| Cysteine protease ATG4A, partial [Bos grunniens mutus]
Length = 408
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 13/80 (16%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVC------------FLCKTENDFASLCSQIRAELRPE 66
D T+HC Q R++IL++DPS+A+ F CK E DF S CS ++ E+ E
Sbjct: 295 DQTFHCLQPPQRMNILNLDPSVALVVLSCLLLLPPKGFFCKEEKDFDSWCSLVQKEILKE 354
Query: 67 QQPLFELIEDPIEDWTPTQP 86
+FEL++ W P P
Sbjct: 355 NLRMFELVQKHPSHWPPFVP 374
>gi|327267215|ref|XP_003218398.1| PREDICTED: cysteine protease ATG4B-like [Anolis carolinensis]
Length = 393
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 12/106 (11%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC R+ I +DPSIAV F C +E DF C +I+ L P+FEL+E
Sbjct: 296 DESFHCQHPPCRMSIAELDPSIAVGFFCNSEEDFNDWCQRIKKLSLIRGALPMFELVEH- 354
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+ + + R+ + D+DFE L
Sbjct: 355 ---------QPSHFSSPDVLNLTPDSSDADRLERFFDSEDEDFEIL 391
>gi|118404310|ref|NP_001072464.1| autophagy related 4B, cysteine peptidase [Xenopus (Silurana)
tropicalis]
gi|115291929|gb|AAI21871.1| cysteine endopeptidase AUT-like (1O128) [Xenopus (Silurana)
tropicalis]
Length = 384
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIE 75
D ++HC R+H+ +DPSIAV F C+++ DF C QI+ L P+FE+++
Sbjct: 287 DESFHCQHPPCRMHVSEIDPSIAVGFFCRSQEDFEDWCQQIKKLSLSGGALPMFEVVD 344
>gi|391335597|ref|XP_003742176.1| PREDICTED: cysteine protease ATG4B-like [Metaseiulus occidentalis]
Length = 393
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 14 DSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQ-QPLFE 72
D E DSTYHC +A R+ I +MDPSIA+CF E++ Q + L LFE
Sbjct: 298 DEEPYNDSTYHCQRAQRMKISNMDPSIAMCFYIGDEDELDQWRVQAKELLVDNSGHMLFE 357
Query: 73 LIEDPI 78
+ + P+
Sbjct: 358 ITDVPL 363
>gi|431912280|gb|ELK14417.1| Cysteine protease ATG4B [Pteropus alecto]
Length = 431
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
D ++HC SR+ I +DPSIA F C+TE+DF C Q++ L P+FEL+E
Sbjct: 335 DESFHCQHPPSRMRIGELDPSIA-GFFCQTEDDFDDWCQQVKKLSLLGGALPMFELVEQ- 392
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+PS+L + S R+ + D+DFE L
Sbjct: 393 ---------QPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 429
>gi|256078123|ref|XP_002575347.1| autophagin-1 (C54 family) [Schistosoma mansoni]
gi|360045353|emb|CCD82901.1| autophagin-1 (C54 family) [Schistosoma mansoni]
Length = 556
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Query: 20 DSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAE-LRPEQQPLFELIEDPI 78
D TYHC R+ + +DPS+ + FLC TE +F LC ++ E L P + L+E
Sbjct: 399 DQTYHCDNPIRIPLKRLDPSMVLGFLCSTEKEFDDLCHNLKEEVLHPSVANSWPLVE--- 455
Query: 79 EDWTPTQPRPSNL 91
RPSNL
Sbjct: 456 ----IHTTRPSNL 464
>gi|330840249|ref|XP_003292131.1| hypothetical protein DICPUDRAFT_99239 [Dictyostelium purpureum]
gi|325077656|gb|EGC31355.1| hypothetical protein DICPUDRAFT_99239 [Dictyostelium purpureum]
Length = 603
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 30/55 (54%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIE 75
+T+ C Q R H+ +DPS+ V F CK+ +DF + +A + P+F + +
Sbjct: 485 NTFFCSQTKRTHVSEVDPSLVVAFFCKSRSDFDDFVDRSKAMASQMENPIFSIFD 539
>gi|343428793|emb|CBQ72338.1| related to ATG4-essential for autophagy [Sporisorium reilianum SRZ2]
Length = 1505
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRA 61
ST+HC + R+ I +DPS+ + FL K E D A LC++I+A
Sbjct: 1075 STFHCDKVRRMPIKSLDPSMLLGFLVKDEEDLADLCARIKA 1115
>gi|257205644|emb|CAX82473.1| autophagy-related cysteine endopeptidase 2 [Schistosoma japonicum]
Length = 632
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 20 DSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAE-LRPEQQPLFELIE 75
D TYHC R+ + +DPS+ + FLC TE +F LC ++ E L P + L+E
Sbjct: 463 DQTYHCENPIRMPLKRLDPSMVLGFLCSTEKEFDDLCHDLKDEVLHPSVASSWPLVE 519
>gi|409050837|gb|EKM60313.1| hypothetical protein PHACADRAFT_179659 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1009
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDP 77
T+HC + ++ + +DPS+ + FLCK E+++ L S+I R + P+F L ++P
Sbjct: 728 TFHCDRVRKMPLSSLDPSMLIGFLCKDESEWQDLKSRINELSRKSKSPVFHLQDEP 783
>gi|148233205|ref|NP_001088025.1| cysteine protease ATG4B [Xenopus laevis]
gi|61211762|sp|Q640G7.1|ATG4B_XENLA RecName: Full=Cysteine protease ATG4B; AltName:
Full=Autophagy-related protein 4 homolog B
gi|52221191|gb|AAH82660.1| LOC494717 protein [Xenopus laevis]
Length = 384
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIE 75
D ++HC R+H+ +DPSIAV F C ++ DF C I+ L P+FE+++
Sbjct: 287 DESFHCQHPPCRMHVSEIDPSIAVGFFCSSQEDFEDWCQHIKKLSLSGGALPMFEVVD 344
>gi|113931596|ref|NP_001039246.1| autophagy related 4D, cysteine peptidase [Xenopus (Silurana)
tropicalis]
gi|89273389|emb|CAJ82151.1| APG4 autophagy 4 homolog D (S. cerevisiae) [Xenopus (Silurana)
tropicalis]
gi|114108226|gb|AAI22932.1| APG4 autophagy 4 homolog D (S. cerevisiae) [Xenopus (Silurana)
tropicalis]
Length = 470
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 13/106 (12%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRP----EQQPLFELIEDP 77
++HC +L I MDPS F K +DF LC + L E+ P+F + E
Sbjct: 374 SFHCNAPRKLSITRMDPSCTFAFYAKNRDDFGKLCEHLSKVLHSPQAEEKYPIFSISEGQ 433
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+++ + + S+ + P C ++ V S D+FEFL
Sbjct: 434 AQEYASAEGQQSS---SHPPVCR------KKGPMVKRPSSDEFEFL 470
>gi|321472665|gb|EFX83634.1| hypothetical protein DAPPUDRAFT_194862 [Daphnia pulex]
Length = 389
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 20 DSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIR--AELRPEQQPLFELIEDP 77
DS+YH +R+ MDPS+AVCF C T +++ L Q + +E+ ++Q LFE+
Sbjct: 300 DSSYHPATCARISFQSMDPSLAVCFSCTTHSEWKDLLRQFKDMSEI-GKKQNLFEVCSQR 358
Query: 78 IEDWTPT 84
+W P+
Sbjct: 359 QAEWHPS 365
>gi|410918329|ref|XP_003972638.1| PREDICTED: cysteine protease ATG4D-like [Takifugu rubripes]
Length = 499
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAEL--RPEQQPLFELIEDPIE 79
++HC ++ MDPS + F K++ DF SLCS + L E+ PLF IE +
Sbjct: 402 SFHCNAPKKMPFNRMDPSCTIGFYAKSKKDFESLCSAVGTALSSSKERYPLFTFIEGRSQ 461
Query: 80 DW 81
D+
Sbjct: 462 DY 463
>gi|328769729|gb|EGF79772.1| hypothetical protein BATDEDRAFT_35298 [Batrachochytrium
dendrobatidis JAM81]
Length = 441
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPIEDW 81
+YHC + L I MDPS+ + F C + DF LC+++ EL PLF IE+ D+
Sbjct: 372 SYHCEKVRLLPIASMDPSLVIGFYCHSLKDFDVLCAKM-TELATGSAPLFS-IEEMTPDF 429
Query: 82 TP 83
P
Sbjct: 430 DP 431
>gi|449666316|ref|XP_002168183.2| PREDICTED: cysteine protease ATG4B-like [Hydra magnipapillata]
Length = 436
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 20 DSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIR-AELRPEQQPLFELIEDPI 78
D ++HC + +DPS+A+ F C TE+DF C + ++ E++P+FE+ +
Sbjct: 324 DESFHCVYPCFMSFQSLDPSVALGFYCHTEDDFDDWCQAVNELVVQREKRPMFEINQTRP 383
Query: 79 EDWTPTQ 85
W P +
Sbjct: 384 RHWPPFE 390
>gi|149642765|ref|NP_001092616.1| cysteine protease ATG4D [Bos taurus]
gi|148744285|gb|AAI42400.1| ATG4D protein [Bos taurus]
Length = 472
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 14/108 (12%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC R+ MDPS V F +F +LCS++ L E+ P+F L+E
Sbjct: 373 SFHCTSPRRMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSATERYPMFTLVEGH 432
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPR--RVSGVGEGSDDDFEFL 123
+D +L SP R PR R+ S +DF FL
Sbjct: 433 AQD--------HSLDDLCSPPSQQTLRLPRSGRLLKAKRPSSEDFVFL 472
>gi|348520913|ref|XP_003447971.1| PREDICTED: cysteine protease ATG4D-like [Oreochromis niloticus]
Length = 500
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAEL--RPEQQPLFELIEDPIE 79
++HC ++ MDPS + F K + DF SLCS + L E+ P+F +E +
Sbjct: 402 SFHCSSPKKMPFNRMDPSCTIGFYAKNKKDFESLCSAVSEALSSSKEKYPVFTFVEGHSQ 461
Query: 80 DW 81
D+
Sbjct: 462 DY 463
>gi|66810578|ref|XP_638996.1| hypothetical protein DDB_G0283753 [Dictyostelium discoideum AX4]
gi|60467622|gb|EAL65643.1| hypothetical protein DDB_G0283753 [Dictyostelium discoideum AX4]
Length = 551
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 30/56 (53%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIED 76
+T+ C R H+ +DPS+ V F CKT++DF + + + P+F + ++
Sbjct: 461 NTFFCSTTKRTHVSEVDPSLVVAFFCKTKDDFNDFVERSKKMTSQMENPIFSIFDN 516
>gi|327306465|ref|XP_003237924.1| hypothetical protein TERG_02632 [Trichophyton rubrum CBS 118892]
gi|326460922|gb|EGD86375.1| hypothetical protein TERG_02632 [Trichophyton rubrum CBS 118892]
Length = 454
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIR 60
STYH + RLHI MDPS+ + FL + E+D+ L Q+R
Sbjct: 379 STYHTRRLRRLHIREMDPSMLIGFLVRDEDDWEDLKRQVR 418
>gi|358339268|dbj|GAA47364.1| autophagy-related protein 4 [Clonorchis sinensis]
Length = 700
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 14/76 (18%)
Query: 20 DSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQ----QPLFELIE 75
D T+HC RL + +DPS+ + F+C TE++F LC+ + ++ + PLFE+
Sbjct: 338 DVTHHCDCPVRLPLERLDPSMVIGFVCTTEDEFDQLCAHLERDVLSVETTCGHPLFEV-- 395
Query: 76 DPIEDWTPTQPRPSNL 91
+ RPSNL
Sbjct: 396 --------HKSRPSNL 403
>gi|189515077|ref|XP_001333093.2| PREDICTED: cysteine protease ATG4D-like [Danio rerio]
Length = 485
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 15/108 (13%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAEL--RPEQQPLFELIEDPIE 79
++HC +++ MDPS + +++ DF SLC+ + L E+ P+F +E +
Sbjct: 387 SFHCNSPRKMNFSRMDPSCTIGLYARSKTDFESLCTAVSEALSSSKEKYPIFTFVEGRGQ 446
Query: 80 DWTPTQPRPSNLGGTSSPS----CSSMRRQPRRVSGVGEGSDDDFEFL 123
+ P + G +P+ CS + R +R GS D+F L
Sbjct: 447 IYGMEGP---SGGSVDAPAHIFTCSRLSRNNKR------GSTDEFVLL 485
>gi|390457789|ref|XP_003732004.1| PREDICTED: cysteine protease ATG4B-like [Callithrix jacchus]
Length = 102
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 23 YHCPQASR-LHILHMDP-SIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDPIE 79
Y+C SR + +L P SI+V F CKTE+DF C Q++ L P+FEL+E
Sbjct: 7 YNCTHPSRRMSLLEETPLSISVGFFCKTEDDFNDRCQQVKKLSLLGGALPMFELVEQ--- 63
Query: 80 DWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFLG 124
+PS+L + S R+ + D+DFE L
Sbjct: 64 -------QPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEILS 101
>gi|291398772|ref|XP_002715996.1| PREDICTED: APG4 autophagy 4 homolog C [Oryctolagus cuniculus]
Length = 458
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
T+HCP ++ MDPS + F C+ DF +I L+ E+ PLF +
Sbjct: 364 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFKRASEEITKMLKMSSKEKYPLFTFVNGHS 423
Query: 79 EDW--TPTQPRPSNL 91
D+ T T R +L
Sbjct: 424 RDYDFTSTTTREEDL 438
>gi|221137004|ref|NP_001137488.1| autophagy-related 4 [Zea mays]
gi|195620628|gb|ACG32144.1| cysteine protease ATG4B [Zea mays]
gi|216963236|gb|ACJ73912.1| autophagy-related 4 variant 1 [Zea mays]
gi|219886349|gb|ACL53549.1| unknown [Zea mays]
gi|414584729|tpg|DAA35300.1| TPA: autophagy 4a variant 2 isoform 1 [Zea mays]
gi|414584730|tpg|DAA35301.1| TPA: autophagy 4a variant 2 isoform 2 [Zea mays]
Length = 492
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAEL--RPEQQPLFELIE 75
S+YHC L + +DPS+A+ F C+ ++DF CS+ +EL + PLF +++
Sbjct: 397 SSYHCSVVRALALEQIDPSLAIGFYCRDKDDFDDFCSRA-SELAEKANGAPLFTVVQ 452
>gi|296804856|ref|XP_002843276.1| cysteine protease atg4 [Arthroderma otae CBS 113480]
gi|238845878|gb|EEQ35540.1| cysteine protease atg4 [Arthroderma otae CBS 113480]
Length = 473
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIR 60
STYH + RLHI MDPS+ + FL + E D+ L +IR
Sbjct: 396 STYHTRRLRRLHIREMDPSMLIGFLVRDEGDWEDLKGRIR 435
>gi|241729578|ref|XP_002404604.1| cysteine protease, putative [Ixodes scapularis]
gi|215505492|gb|EEC14986.1| cysteine protease, putative [Ixodes scapularis]
Length = 433
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 19 LDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ----PLFELI 74
LDS +HC ++ +DPS + F CKT++D IR P+Q P+F +
Sbjct: 334 LDS-FHCSWPRKMSFSRIDPSCTIGFYCKTKHDLEDFTKNIRELTVPKQMRHEYPVFLIS 392
Query: 75 EDPIEDWTPTQPRPSNL 91
E D T T+ RP +
Sbjct: 393 EGSCSDHTDTEKRPEEI 409
>gi|392574855|gb|EIW67990.1| hypothetical protein TREMEDRAFT_63874 [Tremella mesenterica DSM 1558]
Length = 1159
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDP 77
T+HC + ++ + +DPS+ + F+CK E DF CS++ A+L Q +F + E+P
Sbjct: 967 TFHCDKVRKIPLSGLDPSMLLGFVCKDEADFEDFCSRV-AQL---PQKIFTIQEEP 1018
>gi|71022117|ref|XP_761289.1| hypothetical protein UM05142.1 [Ustilago maydis 521]
gi|46097783|gb|EAK83016.1| hypothetical protein UM05142.1 [Ustilago maydis 521]
Length = 1541
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIR 60
ST+HC + R+ I +DPS+ + FL K E D LC++I+
Sbjct: 1103 STFHCEKVRRMPIKSLDPSMLLGFLVKDEEDLMDLCTRIK 1142
>gi|296485832|tpg|DAA27947.1| TPA: APG4 autophagy 4 homolog D [Bos taurus]
Length = 472
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 14/108 (12%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F L+E
Sbjct: 373 SFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSATERYPMFTLVEGH 432
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPR--RVSGVGEGSDDDFEFL 123
+D +L SP R PR R+ S +DF FL
Sbjct: 433 AQD--------HSLDDLCSPPSQQTLRLPRSGRLLKAKRPSSEDFVFL 472
>gi|395840680|ref|XP_003793181.1| PREDICTED: cysteine protease ATG4C [Otolemur garnettii]
Length = 457
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
T+HCP ++ MDPS + F C+ DF +I LR E+ PLF +
Sbjct: 364 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFERTSEEITKMLRISAKEKYPLFTFVNGHS 423
Query: 79 EDWTPT 84
D+ T
Sbjct: 424 RDYDFT 429
>gi|426230580|ref|XP_004009345.1| PREDICTED: LOW QUALITY PROTEIN: cysteine protease ATG4D [Ovis
aries]
Length = 438
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 14/108 (12%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F L+E
Sbjct: 339 SFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSATERYPMFTLVEGH 398
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPR--RVSGVGEGSDDDFEFL 123
+D +L SP R PR R+ S +DF FL
Sbjct: 399 AQD--------HSLDDLCSPPSQQTLRLPRSGRLLKAKRPSSEDFVFL 438
>gi|218195841|gb|EEC78268.1| hypothetical protein OsI_17962 [Oryza sativa Indica Group]
Length = 912
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 10 DKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAEL-RPEQQ 68
D D+ + S+YHC L + +DPS+A+ F C+ ++DF CS+ + +
Sbjct: 370 DIAADNIEADTSSYHCSTVRDLALDLIDPSLAIGFYCRDKDDFDDFCSRATELVDKANGA 429
Query: 69 PLFELIE 75
PLF +++
Sbjct: 430 PLFTVVQ 436
>gi|388581514|gb|EIM21822.1| hypothetical protein WALSEDRAFT_68740 [Wallemia sebi CBS 633.66]
Length = 603
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIR 60
STY C + +++I MDPS+ + FL K EN+F +QI+
Sbjct: 473 STYFCDKPRKMNISQMDPSMLIGFLVKDENEFFEFVNQIK 512
>gi|151556001|gb|AAI49850.1| ATG4D protein [Bos taurus]
Length = 359
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 14/108 (12%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F L+E
Sbjct: 260 SFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSATERYPMFTLVEGH 319
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPR--RVSGVGEGSDDDFEFL 123
+D +L SP R PR R+ S +DF FL
Sbjct: 320 AQD--------HSLDDLCSPPSQQTLRLPRSGRLLKAKRPSSEDFVFL 359
>gi|222629790|gb|EEE61922.1| hypothetical protein OsJ_16662 [Oryza sativa Japonica Group]
Length = 892
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 10 DKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAEL-RPEQQ 68
D D+ + S+YHC L + +DPS+A+ F C+ ++DF CS+ + +
Sbjct: 370 DIAADNIEADTSSYHCSTVRDLALDLIDPSLAIGFYCRDKDDFDDFCSRATELVDKANGA 429
Query: 69 PLFELIE 75
PLF +++
Sbjct: 430 PLFTVVQ 436
>gi|90399070|emb|CAJ86292.1| H0124B04.9 [Oryza sativa Indica Group]
Length = 1216
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 10 DKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAEL-RPEQQ 68
D D+ + S+YHC L + +DPS+A+ F C+ ++DF CS+ + +
Sbjct: 674 DIAADNIEADTSSYHCSTVRDLALDLIDPSLAIGFYCRDKDDFDDFCSRATELVDKANGA 733
Query: 69 PLFELIE 75
PLF +++
Sbjct: 734 PLFTVVQ 740
>gi|390594065|gb|EIN03481.1| hypothetical protein PUNSTDRAFT_56214 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1093
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPIEDW 81
T+HC + ++ + +DPS+ + FLC+ E ++ L ++I A + + +P+F + ++P
Sbjct: 783 TFHCERVRKMPLSGLDPSMLIGFLCRDEEEWRDLRARI-ANMAKKFKPIFAVQDEP---- 837
Query: 82 TPTQPRPSNLG 92
P P S+ G
Sbjct: 838 -PNWPSDSDFG 847
>gi|449508713|ref|XP_002198788.2| PREDICTED: cysteine protease ATG4C [Taeniopygia guttata]
Length = 456
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
++HCP ++ MDPS + F C+T DF +I L+ E+ PLF ++
Sbjct: 361 SFHCPSPKKMSFKKMDPSCTIGFYCRTVQDFEKASEEITKMLKSSSKEKYPLFTFVKGHS 420
Query: 79 EDW 81
D+
Sbjct: 421 RDY 423
>gi|326925485|ref|XP_003208945.1| PREDICTED: cysteine protease ATG4C-like [Meleagris gallopavo]
Length = 458
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
++HCP ++ MDPS + F C+T DF +I L+ E+ PLF ++
Sbjct: 363 SFHCPSPKKMSFKKMDPSCTIGFYCRTVQDFEKASEEITKMLKSSSKEKYPLFTFVKGHS 422
Query: 79 EDW 81
D+
Sbjct: 423 RDY 425
>gi|75138024|sp|Q75KP8.1|ATG4A_ORYSJ RecName: Full=Cysteine protease ATG4A; AltName:
Full=Autophagy-related protein 4 homolog A
gi|40539014|gb|AAR87271.1| putative autophagy protein (with alternative splicing) [Oryza
sativa Japonica Group]
gi|108708571|gb|ABF96366.1| Peptidase family C54 containing protein, expressed [Oryza sativa
Japonica Group]
gi|125586519|gb|EAZ27183.1| hypothetical protein OsJ_11120 [Oryza sativa Japonica Group]
gi|215769128|dbj|BAH01357.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 474
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 10 DKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAEL--RPEQ 67
D D+ + S+YHC L + +DPS+A+ F C+ ++DF CS+ +EL +
Sbjct: 367 DIAADNLEAGTSSYHCSTVRDLALDLIDPSLAIGFYCRDKDDFDDFCSR-ASELVDKANG 425
Query: 68 QPLFELIE 75
PLF +++
Sbjct: 426 APLFTVVQ 433
>gi|449268268|gb|EMC79138.1| Cysteine protease ATG4C [Columba livia]
Length = 459
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
++HCP ++ MDPS + F C+T DF +I L+ E+ PLF ++
Sbjct: 364 SFHCPSPKKMSFKKMDPSCTIGFYCRTVQDFEKASEEITKMLKSSSKEKYPLFTFVKGHS 423
Query: 79 EDW 81
D+
Sbjct: 424 RDY 426
>gi|118094640|ref|XP_422520.2| PREDICTED: cysteine protease ATG4C [Gallus gallus]
Length = 459
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
++HCP ++ MDPS + F C+T DF +I L+ E+ PLF ++
Sbjct: 364 SFHCPSPKKMSFKKMDPSCTIGFYCRTVQDFEKASEEITKMLKSSSKEKYPLFTFVKGHS 423
Query: 79 EDW 81
D+
Sbjct: 424 RDY 426
>gi|431896953|gb|ELK06217.1| Cysteine protease ATG4C [Pteropus alecto]
Length = 378
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
T+HCP ++ MDPS + F C+ DF +I L+ E+ PLF +
Sbjct: 284 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFKRASEEITKMLKVFSKEKYPLFTFVNGHS 343
Query: 79 EDW 81
D+
Sbjct: 344 RDY 346
>gi|148698945|gb|EDL30892.1| autophagy-related 4C (yeast), isoform CRA_b [Mus musculus]
Length = 466
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
T+HCP ++ MDPS + F C+ DF +I L+ E+ PLF +
Sbjct: 372 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFERASEEITKMLKISSKEKYPLFTFVNGHS 431
Query: 79 EDWTPTQPRPS 89
+D+ T S
Sbjct: 432 KDFDFTSTAAS 442
>gi|449676306|ref|XP_002158689.2| PREDICTED: cysteine protease ATG4C-like [Hydra magnipapillata]
Length = 442
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ----PLF 71
++ C ++ MDPS AV F C+T DF SLC Q L+P Q P+F
Sbjct: 339 SFRCHYPKKMAFKKMDPSCAVGFYCRTREDFESLCKQAVEMLKPPMQRTEYPMF 392
>gi|388856806|emb|CCF49593.1| related to ATG4-essential for autophagy [Ustilago hordei]
Length = 1572
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRA 61
ST+HC + R+ I +DPS+ + FL K E LC++I+A
Sbjct: 1125 STFHCEKVRRMPIKSLDPSMLLGFLVKDEESLQDLCARIKA 1165
>gi|426215654|ref|XP_004002085.1| PREDICTED: cysteine protease ATG4C isoform 1 [Ovis aries]
gi|426215656|ref|XP_004002086.1| PREDICTED: cysteine protease ATG4C isoform 2 [Ovis aries]
Length = 458
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
T+HCP ++ MDPS + F C+ DF +I L+ E+ PLF +
Sbjct: 364 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFKRASEEITKMLKISSKEKYPLFTFVNGHS 423
Query: 79 EDWTPTQPRPS 89
D+ T S
Sbjct: 424 RDYDFTSTTTS 434
>gi|326470473|gb|EGD94482.1| hypothetical protein TESG_01998 [Trichophyton tonsurans CBS 112818]
Length = 469
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIR 60
STYH + RLHI MDPS+ + FL + E+D+ L ++R
Sbjct: 394 STYHTRRLRRLHIREMDPSMLIGFLVRDEDDWEDLKRRVR 433
>gi|302498547|ref|XP_003011271.1| autophagy cysteine endopeptidase Atg4, putative [Arthroderma
benhamiae CBS 112371]
gi|291174820|gb|EFE30631.1| autophagy cysteine endopeptidase Atg4, putative [Arthroderma
benhamiae CBS 112371]
Length = 437
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIR 60
STYH + RLH+ MDPS+ + FL + E+D+ L ++R
Sbjct: 362 STYHTRRLRRLHVREMDPSMLIGFLVRDEDDWEDLKQRVR 401
>gi|326478657|gb|EGE02667.1| cysteine protease atg4 [Trichophyton equinum CBS 127.97]
Length = 454
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIR 60
STYH + RLHI MDPS+ + FL + E+D+ L ++R
Sbjct: 379 STYHTRRLRRLHIREMDPSMLIGFLVRDEDDWEDLKRRVR 418
>gi|27763971|emb|CAC85555.1| Apg4-C protein [Mus musculus]
gi|148698944|gb|EDL30891.1| autophagy-related 4C (yeast), isoform CRA_a [Mus musculus]
Length = 458
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
T+HCP ++ MDPS + F C+ DF +I L+ E+ PLF +
Sbjct: 364 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFERASEEITKMLKISSKEKYPLFTFVNGHS 423
Query: 79 EDWTPTQPRPS 89
+D+ T S
Sbjct: 424 KDFDFTSTAAS 434
>gi|443893810|dbj|GAC71266.1| cysteine protease [Pseudozyma antarctica T-34]
Length = 1509
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRA 61
ST+HC + R+ I +DPS+ + FL K E LC++I+A
Sbjct: 1063 STFHCEKVRRMPIKSLDPSMLLGFLVKDEEALVDLCARIKA 1103
>gi|37748391|gb|AAH58981.1| Autophagy-related 4C (yeast) [Mus musculus]
Length = 458
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
T+HCP ++ MDPS + F C+ DF +I L+ E+ PLF +
Sbjct: 364 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFERASEEITKMLKISSKEKYPLFTFVNGHS 423
Query: 79 EDWTPTQPRPS 89
+D+ T S
Sbjct: 424 KDFDFTSTAAS 434
>gi|224994904|gb|ACN76571.1| cysteine proteinase [Triticum aestivum]
Length = 486
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 16/110 (14%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQ---QPLFELIEDP 77
S+YHC + + +DPS+A+ F C+ ++DF CS RA EQ PLF +++
Sbjct: 386 SSYHCSTVRDMPLDLIDPSLAIGFYCRDKDDFDDFCS--RASELAEQANGAPLFTVVQS- 442
Query: 78 IEDWTPTQPRPSNLGGTSSPSCS----SMRRQPRRVSGVGEGSDDDFEFL 123
QP CS S + G GE +D+++ L
Sbjct: 443 ------VQPSKQMYNRDDGSGCSGYGVSGNIDAEDLDGSGETGEDEWQIL 486
>gi|225543220|ref|NP_778194.3| cysteine protease ATG4C [Mus musculus]
gi|225543224|ref|NP_001139439.1| cysteine protease ATG4C [Mus musculus]
gi|341940254|sp|Q811C2.2|ATG4C_MOUSE RecName: Full=Cysteine protease ATG4C; AltName: Full=AUT-like 3
cysteine endopeptidase; AltName: Full=Autophagin-3;
AltName: Full=Autophagy-related cysteine endopeptidase
3; AltName: Full=Autophagy-related protein 4 homolog C
Length = 458
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
T+HCP ++ MDPS + F C+ DF +I L+ E+ PLF +
Sbjct: 364 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFERASEEITKMLKISSKEKYPLFTFVNGHS 423
Query: 79 EDWTPTQPRPS 89
+D+ T S
Sbjct: 424 KDFDFTSTAAS 434
>gi|328351041|emb|CCA37441.1| autophagy-related protein 4 [Komagataella pastoris CBS 7435]
Length = 758
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 7/57 (12%)
Query: 3 TGHIGVYDKEQDSEKKLD-------STYHCPQASRLHILHMDPSIAVCFLCKTENDF 52
T H Y+ + D+ K ++ + H P+ ++LH+ HMDPS+ + FL +E+DF
Sbjct: 339 TNHDDCYESKLDNSKYVEILSCLDVKSVHTPKVTKLHLSHMDPSMLIGFLITSEDDF 395
>gi|221137006|ref|NP_001137489.1| autophagy-related 4b [Zea mays]
gi|194701156|gb|ACF84662.1| unknown [Zea mays]
gi|195657359|gb|ACG48147.1| cysteine protease ATG4B [Zea mays]
gi|216963250|gb|ACJ73914.1| autophagy-related 4b variant 1 [Zea mays]
gi|413920007|gb|AFW59939.1| autophagy 4b variant 1Cysteine protease ATG4B [Zea mays]
Length = 492
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAEL--RPEQQPLFELIE 75
S+YHC L + +DPS+A+ F C+ ++DF CS+ +EL + PLF +++
Sbjct: 394 SSYHCSVVRDLALEQIDPSLAIGFYCRDKDDFDDFCSRA-SELAEKANGAPLFTVMQ 449
>gi|115461386|ref|NP_001054293.1| Os04g0682000 [Oryza sativa Japonica Group]
gi|75143803|sp|Q7XPW8.1|ATG4B_ORYSJ RecName: Full=Cysteine protease ATG4B; AltName:
Full=Autophagy-related protein 4 homolog B
gi|32488637|emb|CAE03430.1| OSJNBa0032F06.13 [Oryza sativa Japonica Group]
gi|82470053|gb|ABB77259.1| autophagy 4 [Oryza sativa Indica Group]
gi|113565864|dbj|BAF16207.1| Os04g0682000 [Oryza sativa Japonica Group]
gi|215697216|dbj|BAG91210.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 10 DKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAEL-RPEQQ 68
D D+ + S+YHC L + +DPS+A+ F C+ ++DF CS+ + +
Sbjct: 370 DIAADNIEADTSSYHCSTVRDLALDLIDPSLAIGFYCRDKDDFDDFCSRATELVDKANGA 429
Query: 69 PLFELIE 75
PLF +++
Sbjct: 430 PLFTVVQ 436
>gi|357166768|ref|XP_003580841.1| PREDICTED: cysteine protease ATG4B-like [Brachypodium distachyon]
Length = 493
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQI-RAELRPEQQPLFELIE 75
S+YHC + + +DPS+A+ F C+ ++DF CS+ ++ PLF +++
Sbjct: 393 SSYHCSTVRDMALDLLDPSLAIGFYCRDKDDFDDFCSRASELVVKANGAPLFTVVQ 448
>gi|254567087|ref|XP_002490654.1| Conserved cysteine protease required for autophagy [Komagataella
pastoris GS115]
gi|238030450|emb|CAY68374.1| Conserved cysteine protease required for autophagy [Komagataella
pastoris GS115]
Length = 531
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 7/57 (12%)
Query: 3 TGHIGVYDKEQDSEKKLD-------STYHCPQASRLHILHMDPSIAVCFLCKTENDF 52
T H Y+ + D+ K ++ + H P+ ++LH+ HMDPS+ + FL +E+DF
Sbjct: 339 TNHDDCYESKLDNSKYVEILSCLDVKSVHTPKVTKLHLSHMDPSMLIGFLITSEDDF 395
>gi|147742963|sp|Q2XPP4.2|ATG4B_ORYSI RecName: Full=Cysteine protease ATG4B; AltName:
Full=Autophagy-related protein 4 homolog B;
Short=Protein autophagy 4; AltName: Full=OsAtg4
Length = 478
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 10 DKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAEL-RPEQQ 68
D D+ + S+YHC L + +DPS+A+ F C+ ++DF CS+ + +
Sbjct: 370 DIAADNIEADTSSYHCSTVRDLALDLIDPSLAIGFYCRDKDDFDDFCSRATELVDKANGA 429
Query: 69 PLFELIE 75
PLF +++
Sbjct: 430 PLFTVVQ 436
>gi|194696780|gb|ACF82474.1| unknown [Zea mays]
gi|413920008|gb|AFW59940.1| autophagy 4b variant 3 [Zea mays]
Length = 462
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAEL--RPEQQPLFELIE 75
S+YHC L + +DPS+A+ F C+ ++DF CS+ +EL + PLF +++
Sbjct: 364 SSYHCSVVRDLALEQIDPSLAIGFYCRDKDDFDDFCSRA-SELAEKANGAPLFTVMQ 419
>gi|149709514|ref|XP_001500964.1| PREDICTED: cysteine protease ATG4C [Equus caballus]
Length = 458
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
T+HCP ++ MDPS + F C+ DF +I L+ E+ PLF +
Sbjct: 364 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFKRASEEITKMLKISSKEKYPLFTFVNGHS 423
Query: 79 EDW--TPTQPRPSNL 91
D+ T T + +L
Sbjct: 424 RDYDFTSTAAKEDDL 438
>gi|335774946|gb|AEH58408.1| cysteine protease ATG4C-like protein, partial [Equus caballus]
Length = 400
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
T+HCP ++ MDPS + F C+ DF +I L+ E+ PLF +
Sbjct: 306 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFKRASEEITKMLKISSKEKYPLFTFVNGHS 365
Query: 79 EDW--TPTQPRPSNL 91
D+ T T + +L
Sbjct: 366 RDYDFTSTAAKEDDL 380
>gi|355757609|gb|EHH61134.1| Cysteine protease ATG4A, partial [Macaca fascicularis]
Length = 396
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
D T+HC Q+ R++IL++DPS+A+ + + ++C+ E+ E +FEL++
Sbjct: 295 DQTFHCLQSPQRMNILNLDPSVALVGIRRLSGPGDTMCTVSPQEILKENLRMFELVQKHP 354
Query: 79 EDWTPTQP 86
W P P
Sbjct: 355 SHWPPFVP 362
>gi|224994902|gb|ACN76570.1| cysteine proteinase [Triticum aestivum]
Length = 484
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 16/110 (14%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQ---QPLFELIEDP 77
S+YHC + + +DPS+A+ F C+ ++DF CS RA EQ PLF +++
Sbjct: 384 SSYHCSTVRDMPLDLIDPSLAIGFYCRDKDDFDDFCS--RASELAEQANGAPLFTVVQ-- 439
Query: 78 IEDWTPTQPRPSNLGGTSSPSCS----SMRRQPRRVSGVGEGSDDDFEFL 123
QP CS S + G GE +D+++ L
Sbjct: 440 -----SVQPSKQMYNQDDGSGCSGYGVSDNIDTEDLDGSGETGEDEWQIL 484
>gi|426329870|ref|XP_004025954.1| PREDICTED: cysteine protease ATG4C [Gorilla gorilla gorilla]
Length = 491
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
T+HCP ++ MDPS + F C+ DF +I L+ E+ PLF +
Sbjct: 397 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFERASEEITKMLKFSSKEKYPLFTFVNGHS 456
Query: 79 EDWTPT 84
D+ T
Sbjct: 457 RDYDFT 462
>gi|149507363|ref|XP_001514370.1| PREDICTED: cysteine protease ATG4C [Ornithorhynchus anatinus]
Length = 459
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRP---EQQPLFELIEDPI 78
++HCP ++ MDPS V F C+ DF +I L+ E+ PLF ++
Sbjct: 364 SFHCPSPKKMSFRKMDPSCTVGFYCRNVQDFERASEEITKVLKASSKEKYPLFTFVKGHS 423
Query: 79 EDWT----PTQPRP 88
D+ PT+ P
Sbjct: 424 RDYDFASGPTREEP 437
>gi|355669957|gb|AER94693.1| ATG4 autophagy related 4-like protein C [Mustela putorius furo]
Length = 396
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
T+HCP ++ MDPS + F C+ DF +I L+ E+ PLF +
Sbjct: 302 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFKRASEEITKMLKISSKEKYPLFTFVNGHS 361
Query: 79 EDWTPT 84
D+ T
Sbjct: 362 RDYDFT 367
>gi|260823874|ref|XP_002606893.1| hypothetical protein BRAFLDRAFT_126356 [Branchiostoma floridae]
gi|229292238|gb|EEN62903.1| hypothetical protein BRAFLDRAFT_126356 [Branchiostoma floridae]
Length = 384
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQP 69
++HC ++ I MDPS + F C+T +DF C+ + E+ + P
Sbjct: 282 SFHCMNPRKMSIARMDPSCTIGFYCRTRDDFNKFCTTVTEEMLRQPGP 329
>gi|126723748|ref|NP_001075911.1| cysteine protease ATG4C [Bos taurus]
gi|126010621|gb|AAI33599.1| ATG4C protein [Bos taurus]
Length = 458
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
T+HCP ++ MDPS + F C+ DF +I L+ E+ PLF +
Sbjct: 364 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFKRASEEITKMLKISSKEKYPLFTFVNGHS 423
Query: 79 EDWTPT 84
D+ T
Sbjct: 424 RDYDFT 429
>gi|30410844|ref|NP_116241.2| cysteine protease ATG4C [Homo sapiens]
gi|30410846|ref|NP_835739.1| cysteine protease ATG4C [Homo sapiens]
gi|114556947|ref|XP_001159883.1| PREDICTED: cysteine protease ATG4C isoform 4 [Pan troglodytes]
gi|114556951|ref|XP_001159976.1| PREDICTED: cysteine protease ATG4C isoform 6 [Pan troglodytes]
gi|61211867|sp|Q96DT6.1|ATG4C_HUMAN RecName: Full=Cysteine protease ATG4C; AltName: Full=AUT-like 3
cysteine endopeptidase; AltName: Full=Autophagin-3;
AltName: Full=Autophagy-related cysteine endopeptidase
3; AltName: Full=Autophagy-related protein 4 homolog C
gi|14625875|emb|CAC43939.1| putative autophagy-related cysteine endopeptidase [Homo sapiens]
gi|21542522|gb|AAH33024.1| ATG4 autophagy related 4 homolog C (S. cerevisiae) [Homo sapiens]
gi|27763973|emb|CAC85556.1| Apg4-C protein [Homo sapiens]
gi|119626984|gb|EAX06579.1| ATG4 autophagy related 4 homolog C (S. cerevisiae), isoform CRA_a
[Homo sapiens]
gi|119626985|gb|EAX06580.1| ATG4 autophagy related 4 homolog C (S. cerevisiae), isoform CRA_a
[Homo sapiens]
gi|123983334|gb|ABM83408.1| ATG4 autophagy related 4 homolog C (S. cerevisiae) [synthetic
construct]
gi|123998035|gb|ABM86619.1| ATG4 autophagy related 4 homolog C (S. cerevisiae) [synthetic
construct]
gi|410220598|gb|JAA07518.1| ATG4 autophagy related 4 homolog C [Pan troglodytes]
gi|410220600|gb|JAA07519.1| ATG4 autophagy related 4 homolog C [Pan troglodytes]
gi|410267918|gb|JAA21925.1| ATG4 autophagy related 4 homolog C [Pan troglodytes]
gi|410291226|gb|JAA24213.1| ATG4 autophagy related 4 homolog C [Pan troglodytes]
gi|410291228|gb|JAA24214.1| ATG4 autophagy related 4 homolog C [Pan troglodytes]
gi|410335203|gb|JAA36548.1| ATG4 autophagy related 4 homolog C [Pan troglodytes]
gi|410335205|gb|JAA36549.1| ATG4 autophagy related 4 homolog C [Pan troglodytes]
Length = 458
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
T+HCP ++ MDPS + F C+ DF +I L+ E+ PLF +
Sbjct: 364 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFKRASEEITKMLKFSSKEKYPLFTFVNGHS 423
Query: 79 EDWTPT 84
D+ T
Sbjct: 424 RDYDFT 429
>gi|348586836|ref|XP_003479174.1| PREDICTED: cysteine protease ATG4C-like [Cavia porcellus]
Length = 435
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
T+HCP ++ MDPS + F C+ DF +I L+ E+ PLF +
Sbjct: 342 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFQRASEEITKMLKMSSKEKYPLFTFVHGHS 401
Query: 79 EDWTPT 84
+D+ T
Sbjct: 402 KDYDFT 407
>gi|73956170|ref|XP_852273.1| PREDICTED: cysteine protease ATG4C isoform 2 [Canis lupus
familiaris]
gi|73956176|ref|XP_865426.1| PREDICTED: cysteine protease ATG4C isoform 4 [Canis lupus
familiaris]
Length = 458
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
T+HCP ++ MDPS + F C+ DF +I L+ E+ PLF +
Sbjct: 364 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFKRASEEITKMLKISSKEKYPLFTFVNGHS 423
Query: 79 EDWTPT 84
D+ T
Sbjct: 424 RDYDFT 429
>gi|147742949|sp|A2XHJ5.1|ATG4A_ORYSI RecName: Full=Cysteine protease ATG4A; AltName:
Full=Autophagy-related protein 4 homolog A
gi|125544166|gb|EAY90305.1| hypothetical protein OsI_11880 [Oryza sativa Indica Group]
Length = 473
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 10 DKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAEL--RPEQ 67
D D+ + S+YHC L + +DPS+A+ F C+ ++DF CS+ +EL +
Sbjct: 366 DIAADNLEADTSSYHCSTVRDLALDLIDPSLAIGFYCRDKDDFDDFCSRA-SELVDKANG 424
Query: 68 QPLFELIE 75
PLF +++
Sbjct: 425 APLFTVMQ 432
>gi|301764643|ref|XP_002917740.1| PREDICTED: cysteine protease ATG4C-like [Ailuropoda melanoleuca]
gi|281350282|gb|EFB25866.1| hypothetical protein PANDA_006093 [Ailuropoda melanoleuca]
Length = 458
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
T+HCP ++ MDPS + F C+ DF +I L+ E+ PLF +
Sbjct: 364 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFKRASEEITKMLKISSKEKYPLFTFVNGHS 423
Query: 79 EDWTPT 84
D+ T
Sbjct: 424 RDYDFT 429
>gi|440902657|gb|ELR53425.1| Cysteine protease ATG4C [Bos grunniens mutus]
Length = 458
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
T+HCP ++ MDPS + F C+ DF +I L+ E+ PLF +
Sbjct: 364 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFKRASEEITKMLKISSKEKYPLFTFVNGHS 423
Query: 79 EDWTPT 84
D+ T
Sbjct: 424 RDYDFT 429
>gi|296489147|tpg|DAA31260.1| TPA: APG4 autophagy 4 homolog C [Bos taurus]
Length = 458
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
T+HCP ++ MDPS + F C+ DF +I L+ E+ PLF +
Sbjct: 364 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFKRASEEITKMLKISSKEKYPLFTFVNGHS 423
Query: 79 EDWTPT 84
D+ T
Sbjct: 424 RDYDFT 429
>gi|298231125|ref|NP_001177213.1| cysteine protease ATG4C [Sus scrofa]
gi|296874486|gb|ADH81748.1| autophagy related 4-like protein C [Sus scrofa]
Length = 458
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
T+HCP ++ MDPS + F C+ DF +I L+ E+ PLF +
Sbjct: 364 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFKRASEEITKMLKSSSKEKYPLFTFVNAHS 423
Query: 79 EDWTPT 84
D+ T
Sbjct: 424 RDYDFT 429
>gi|74147895|dbj|BAE22307.1| unnamed protein product [Mus musculus]
Length = 458
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
T+HCP ++ MDPS + F C+ DF +I L+ E+ PLF +
Sbjct: 364 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFERASEEITKILKISSKEKYPLFTFVNGHS 423
Query: 79 EDWTPTQPRPS 89
+D+ T S
Sbjct: 424 KDFDFTSTAAS 434
>gi|116283594|gb|AAH18678.1| ATG4C protein [Homo sapiens]
Length = 451
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
T+HCP ++ MDPS + F C+ DF +I L+ E+ PLF +
Sbjct: 364 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFKRASEEITKMLKFSSKEKYPLFTFVNGHS 423
Query: 79 EDWTPT 84
D+ T
Sbjct: 424 RDYDFT 429
>gi|395530478|ref|XP_003767321.1| PREDICTED: cysteine protease ATG4C [Sarcophilus harrisii]
Length = 458
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRP---EQQPLFELIEDPI 78
++HCP ++ MDPS V F C+ DF +I L+ E+ PLF ++
Sbjct: 364 SFHCPSPKKMSFRKMDPSCTVGFYCRNIQDFERASEEITKVLKASSREKYPLFTFVKGHA 423
Query: 79 EDW----TPTQ 85
D+ TPT
Sbjct: 424 RDYDFTCTPTN 434
>gi|332232054|ref|XP_003265216.1| PREDICTED: cysteine protease ATG4C isoform 1 [Nomascus leucogenys]
gi|332232056|ref|XP_003265217.1| PREDICTED: cysteine protease ATG4C isoform 2 [Nomascus leucogenys]
Length = 458
Score = 41.6 bits (96), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
T+HCP ++ MDPS + F C+ DF +I L+ E+ PLF +
Sbjct: 364 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFERASEEITKMLKFSSKEKYPLFTFVNGHS 423
Query: 79 EDWTPT 84
D+ T
Sbjct: 424 RDYDFT 429
>gi|417401291|gb|JAA47536.1| Putative cysteine protease required for autophagy [Desmodus
rotundus]
Length = 458
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
T+HCP ++ MDPS + F C+ DF +I L+ E+ PLF +
Sbjct: 364 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFQRASEEITKMLKISSKEKYPLFTFVNGHS 423
Query: 79 EDWTPT 84
D+ T
Sbjct: 424 RDYDFT 429
>gi|126305934|ref|XP_001364974.1| PREDICTED: cysteine protease ATG4C [Monodelphis domestica]
Length = 460
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRP---EQQPLFELIEDPI 78
++HCP ++ MDPS V F C+ DF ++ L+ E+ PLF ++
Sbjct: 366 SFHCPSPKKMSFRKMDPSCTVGFYCRNAQDFERASEELTQVLKASSREKYPLFTFVKGHA 425
Query: 79 EDWTPTQPRPSN 90
D+ T P+N
Sbjct: 426 RDYDFTST-PTN 436
>gi|157818033|ref|NP_001101418.1| cysteine protease ATG4C [Rattus norvegicus]
gi|149044549|gb|EDL97808.1| similar to APG4 autophagy 4 homolog C [Rattus norvegicus]
Length = 458
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
T+HCP ++ MDPS + F C+ DF +I L+ E+ PLF +
Sbjct: 364 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFERASEEITKMLKISSKEKYPLFTFVNGHS 423
Query: 79 EDWTPTQPRPS 89
D+ T S
Sbjct: 424 RDFDFTSTAAS 434
>gi|297664749|ref|XP_002810790.1| PREDICTED: cysteine protease ATG4C [Pongo abelii]
Length = 458
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
T+HCP ++ MDPS + F C+ DF +I L+ E+ PLF +
Sbjct: 364 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFERASEEITKMLKFSSKEKYPLFTFVNGHS 423
Query: 79 EDWTPT 84
D+ T
Sbjct: 424 RDYDFT 429
>gi|403257906|ref|XP_003921531.1| PREDICTED: cysteine protease ATG4C [Saimiri boliviensis
boliviensis]
Length = 458
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
T+HCP ++ MDPS + F C+ DF +I L+ E+ PLF +
Sbjct: 364 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFERASEEITKMLKFSSKEKYPLFTFVNGHS 423
Query: 79 EDWTPT 84
D+ T
Sbjct: 424 RDYDFT 429
>gi|355558068|gb|EHH14848.1| hypothetical protein EGK_00836 [Macaca mulatta]
Length = 458
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
T+HCP ++ MDPS + F C+ DF +I L+ E+ PLF +
Sbjct: 364 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFERASEEITKMLKFSSKEKYPLFTFVNGHS 423
Query: 79 EDWTPT 84
D+ T
Sbjct: 424 RDYDFT 429
>gi|403413274|emb|CCL99974.1| predicted protein [Fibroporia radiculosa]
Length = 994
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 33/56 (58%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDP 77
T+HC + ++ + +DPS+ + FLCK END+ L ++ ++ +F + ++P
Sbjct: 711 TFHCDRVRKMPLSGLDPSMLIGFLCKDENDWIDLRRRLTELFNTHKRHIFSIQDEP 766
>gi|255945233|ref|XP_002563384.1| Pc20g08610 [Penicillium chrysogenum Wisconsin 54-1255]
gi|166990617|sp|A7KAL5.1|ATG4_PENCW RecName: Full=Probable cysteine protease atg4; AltName:
Full=Autophagy-related protein 4
gi|129561973|gb|ABO31075.1| Atg4p [Penicillium chrysogenum]
gi|211588119|emb|CAP86190.1| Pc20g08610 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 401
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 6/55 (10%)
Query: 7 GVYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRA 61
G+Y +E+ LDS Y+ + R+HI MDPS+ + FL K E+D+A +IR+
Sbjct: 314 GLYTQEE-----LDS-YYTSRLRRIHIKDMDPSMLIGFLVKDEDDWADWKKRIRS 362
>gi|383872484|ref|NP_001244816.1| cysteine protease ATG4C [Macaca mulatta]
gi|355745338|gb|EHH49963.1| hypothetical protein EGM_00712 [Macaca fascicularis]
gi|380788509|gb|AFE66130.1| cysteine protease ATG4C isoform 8 [Macaca mulatta]
gi|383413101|gb|AFH29764.1| cysteine protease ATG4C isoform 8 [Macaca mulatta]
Length = 458
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
T+HCP ++ MDPS + F C+ DF +I L+ E+ PLF +
Sbjct: 364 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFERASEEITKMLKFSSKEKYPLFTFVNGHS 423
Query: 79 EDWTPT 84
D+ T
Sbjct: 424 RDYDFT 429
>gi|410967384|ref|XP_003990200.1| PREDICTED: cysteine protease ATG4C [Felis catus]
Length = 459
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
T+HCP ++ MDPS + F C+ DF +I L+ E+ PLF +
Sbjct: 365 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFKRASEEITKMLKISSKEKYPLFTFVNGHS 424
Query: 79 EDWTPT 84
D+ T
Sbjct: 425 RDYDFT 430
>gi|402854773|ref|XP_003892029.1| PREDICTED: cysteine protease ATG4C isoform 1 [Papio anubis]
gi|402854775|ref|XP_003892030.1| PREDICTED: cysteine protease ATG4C isoform 2 [Papio anubis]
Length = 458
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
T+HCP ++ MDPS + F C+ DF +I L+ E+ PLF +
Sbjct: 364 TFHCPSPKKMAFRKMDPSCTIGFYCRNVQDFERASEEITKMLKFSSKEKYPLFTFVNGHS 423
Query: 79 EDWTPT 84
D+ T
Sbjct: 424 RDYDFT 429
>gi|442757637|gb|JAA70977.1| Putative cysteine protease required for autophagy [Ixodes ricinus]
Length = 458
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
T+HCP ++ MDPS + F C+ DF +I L+ E+ PLF +
Sbjct: 364 TFHCPSPKKMSFRKMDPSCTIGFYCRNIQDFKRASEEITKMLKISSKEKYPLFTFVNGHS 423
Query: 79 EDWTPT 84
D+ T
Sbjct: 424 RDYDFT 429
>gi|354470829|ref|XP_003497647.1| PREDICTED: cysteine protease ATG4C [Cricetulus griseus]
Length = 458
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
T+HCP ++ MDPS + F C+ DF +I L+ E+ PLF +
Sbjct: 364 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFERASEEITKILKISSKEKYPLFTFVNGHS 423
Query: 79 EDWTPTQPRPS 89
D+ T S
Sbjct: 424 RDFDFTSTAAS 434
>gi|14042698|dbj|BAB55356.1| unnamed protein product [Homo sapiens]
Length = 446
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELI 74
T+HCP ++ MDPS + F C+ DF +I L+ E+ PLF +
Sbjct: 364 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFKRASEEITKMLKFSSKEKYPLFTFV 419
>gi|431918972|gb|ELK17839.1| Cysteine protease ATG4D [Pteropus alecto]
Length = 442
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 14/108 (12%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F L E
Sbjct: 343 SFHCTSPRKMAFTKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSATERYPMFTLAEGH 402
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPR--RVSGVGEGSDDDFEFL 123
+D NL SS ++ PR R+ S +DF FL
Sbjct: 403 AQD--------HNLDNFSSQLSQPAQQLPRAGRLLKAKRPSSEDFVFL 442
>gi|321263995|ref|XP_003196715.1| hypothetical protein CGB_K2500C [Cryptococcus gattii WM276]
gi|317463192|gb|ADV24928.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 1188
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPIEDW 81
TYHC + ++ + +DPS+ + F+CK+E+DF + R L P++ +F ++D + W
Sbjct: 947 TYHCEKIKKMPLSGLDPSMLLGFVCKSEDDFENFVE--RVALLPKK--IF-TVQDEMPSW 1001
>gi|149422017|ref|XP_001518728.1| PREDICTED: cysteine protease ATG4D-like [Ornithorhynchus anatinus]
Length = 286
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR--PEQQPLFELIE 75
++HC +L MDPS V F T DF +LCSQ+ L + P+F + E
Sbjct: 190 SFHCTAPRKLPFAKMDPSCTVGFYAGTRKDFEALCSQLLQALNSTATRYPMFTVAE 245
>gi|403345460|gb|EJY72096.1| Cysteine protease family C54 putative [Oxytricha trifallax]
Length = 823
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 8 VYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDF 52
V ++E+ S +L+ TYHC QA +L + +D S+A F K NDF
Sbjct: 675 VLNQEELSNVELNQTYHCDQAKKLSMTKLDTSLAFGFYLKDYNDF 719
>gi|159128081|gb|EDP53196.1| autophagy cysteine endopeptidase Atg4, putative [Aspergillus
fumigatus A1163]
Length = 226
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFE 72
TYH + R+HI MDPS+ + F+ K D+A S + A+ +P L E
Sbjct: 107 TYHTRRLRRIHIRDMDPSMLIGFIIKDREDWAHWKSGVSAQEKPIVHVLSE 157
>gi|296208133|ref|XP_002750954.1| PREDICTED: cysteine protease ATG4C [Callithrix jacchus]
Length = 458
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
T+HCP ++ MDPS + F C+ DF +I L+ E+ PLF +
Sbjct: 364 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFERASEEITKMLQFSSKEKYPLFTFVNGHS 423
Query: 79 EDWTPT 84
D+ T
Sbjct: 424 RDYDFT 429
>gi|444726263|gb|ELW66801.1| Cysteine protease ATG4C [Tupaia chinensis]
Length = 378
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAEL---RPEQQPLFELIEDPI 78
T+HCP ++ MDPS + F C+ DF +I L E+ PLF +
Sbjct: 284 TFHCPSPKKMSFRKMDPSCTIGFYCRNIQDFKRASEEITKMLTISSKEKYPLFTFVNGHS 343
Query: 79 EDW 81
D+
Sbjct: 344 RDY 346
>gi|344278625|ref|XP_003411094.1| PREDICTED: cysteine protease ATG4C [Loxodonta africana]
Length = 458
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
T+HCP ++ MDPS + F C+ DF +I L+ E+ PLF +
Sbjct: 364 TFHCPSPKKMSFRKMDPSCTIGFYCQNVQDFERASEEITKMLKVSSKEKYPLFTFVNGHS 423
Query: 79 EDWTPT 84
D+ T
Sbjct: 424 RDYDFT 429
>gi|71000771|ref|XP_755067.1| autophagy cysteine endopeptidase Atg4 [Aspergillus fumigatus Af293]
gi|66852704|gb|EAL93029.1| autophagy cysteine endopeptidase Atg4, putative [Aspergillus
fumigatus Af293]
Length = 226
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFE 72
TYH + R+HI MDPS+ + F+ K D+A S + A+ +P L E
Sbjct: 107 TYHTRRLRRIHIRDMDPSMLIGFIIKDREDWAHWKSGVSAQEKPIVHVLSE 157
>gi|457866467|dbj|BAM93578.1| autophagy related protein 4 [Vigna unguiculata]
Length = 219
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ--PLFELIE 75
S+YHC + + +DPS+A+ F C+ ++DF CSQ ++L E PLF + +
Sbjct: 119 SSYHCNVMRHIPLDSIDPSLAIGFYCRDKDDFDDFCSQ-ASKLAEESNGAPLFTVAQ 174
>gi|291238482|ref|XP_002739158.1| PREDICTED: Autophagy-specific gene 4-like [Saccoglossus
kowalevskii]
Length = 338
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAEL 63
++HC ++ ++ MDPS + F CKT++DF CS + L
Sbjct: 240 SFHCMSPRKMSLMKMDPSCTIGFYCKTQDDFKEFCSYAQEVL 281
>gi|397475554|ref|XP_003809200.1| PREDICTED: cysteine protease ATG4C isoform 1 [Pan paniscus]
gi|397475556|ref|XP_003809201.1| PREDICTED: cysteine protease ATG4C isoform 2 [Pan paniscus]
Length = 458
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
T+HCP ++ MDPS + F C+ DF +I L E+ PLF +
Sbjct: 364 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFKRASEEITKMLEFSSKEKYPLFTFVNGHS 423
Query: 79 EDWTPT 84
D+ T
Sbjct: 424 RDYDFT 429
>gi|432845798|ref|XP_004065858.1| PREDICTED: cysteine protease ATG4D-like [Oryzias latipes]
Length = 497
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAEL--RPEQQPLFELIEDPIE 79
++HC ++ MDPS + F +T+ DF S+CS + L E+ P+F ++ +
Sbjct: 399 SFHCSSPKKMPFSRMDPSCTIGFYARTKEDFESMCSVVGMVLSSSKEKYPIFTFVDGRGQ 458
Query: 80 DW 81
D+
Sbjct: 459 DY 460
>gi|356531828|ref|XP_003534478.1| PREDICTED: cysteine protease ATG4-like [Glycine max]
Length = 486
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ--PLFELIE 75
S+YHC + + +DPS+A+ F C+ ++DF CSQ ++L E PLF + +
Sbjct: 387 SSYHCNIMRHIPLDSIDPSLAIGFYCRDKDDFDDFCSQA-SKLAEESNGAPLFTVTQ 442
>gi|148226916|ref|NP_001087417.1| cysteine protease ATG4D [Xenopus laevis]
gi|61211765|sp|Q68FJ9.1|ATG4D_XENLA RecName: Full=Cysteine protease ATG4D; AltName: Full=Autophagin-4;
AltName: Full=Autophagy-related protein 4 homolog D
gi|51260960|gb|AAH79754.1| MGC84754 protein [Xenopus laevis]
Length = 469
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRP----EQQPLFELIEDP 77
++HC ++ I MDPS F K DF LC + L E+ P+F + E
Sbjct: 375 SFHCNSPRKISITRMDPSCTFAFYAKNSEDFGKLCDHLMKVLHSPRAEEKYPIFSISEGQ 434
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
+++ P+ S + P C ++ P V S D+FEFL
Sbjct: 435 AQEYA-EGPQSS----SHPPVCR--KKGPL----VKRPSSDEFEFL 469
>gi|297265289|ref|XP_002799164.1| PREDICTED: cysteine protease ATG4B-like [Macaca mulatta]
Length = 358
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 11/96 (11%)
Query: 29 SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDPIEDWTPTQPR 87
+R +I+ + S A+ F CKTE+DF C Q++ L P+FEL+E +
Sbjct: 271 ARCNIVEPEGSRALGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVEQ----------Q 320
Query: 88 PSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
PS+L + S R+ + D+DFE L
Sbjct: 321 PSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 356
>gi|356568569|ref|XP_003552483.1| PREDICTED: cysteine protease ATG4-like [Glycine max]
Length = 485
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ--PLFELIE 75
S+YHC + + +DPS+A+ F C+ ++DF CSQ ++L E PLF + +
Sbjct: 387 SSYHCNVMRHIPLDSIDPSLAIGFYCRDKDDFDDFCSQA-SKLAEESNGAPLFTVAK 442
>gi|390177147|ref|XP_001357920.3| GA19429 [Drosophila pseudoobscura pseudoobscura]
gi|388858923|gb|EAL27056.3| GA19429 [Drosophila pseudoobscura pseudoobscura]
Length = 676
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRP 65
++HC A +L + MDPS + F C T+ DF S ++ L P
Sbjct: 533 SFHCKSARKLKVSKMDPSCCIGFYCATKTDFDSFMESVQLYLHP 576
>gi|239614382|gb|EEQ91369.1| cysteine protease atg4 [Ajellomyces dermatitidis ER-3]
gi|327351393|gb|EGE80250.1| cysteine protease atg4 [Ajellomyces dermatitidis ATCC 18188]
Length = 494
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 12 EQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRA 61
+Q ++++L+ TYH + RLHI MDPS+ + FL + E+D+ + +R
Sbjct: 368 QQYTDEELN-TYHTRRLRRLHIKDMDPSMLIGFLIRDEDDWDNWKRNVRG 416
>gi|195158262|ref|XP_002020011.1| GL13755 [Drosophila persimilis]
gi|194116780|gb|EDW38823.1| GL13755 [Drosophila persimilis]
Length = 678
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRP 65
++HC A +L + MDPS + F C T+ DF S ++ L P
Sbjct: 533 SFHCKSARKLKVSKMDPSCCIGFYCATKTDFDSFMESVQLYLHP 576
>gi|226294409|gb|EEH49829.1| cysteine protease atg4 [Paracoccidioides brasiliensis Pb18]
Length = 513
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 15 SEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQI 59
+E++L+S YH + RLHI MDPS+ + FL K E+D+A +
Sbjct: 399 TEEELNS-YHTRRLRRLHIKDMDPSMLIGFLIKDEDDWADWKRNV 442
>gi|320169048|gb|EFW45947.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 918
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCS 57
T+H +++ HMDPS+A+ FLC+ + DF LC+
Sbjct: 574 TFHSAVPNKIPFTHMDPSMAIGFLCQNQADFDDLCN 609
>gi|157126425|ref|XP_001660889.1| hypothetical protein AaeL_AAEL010516 [Aedes aegypti]
gi|108873276|gb|EAT37501.1| AAEL010516-PA [Aedes aegypti]
Length = 583
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 27/50 (54%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPL 70
+++HC ++ + MDPS + F C+T DF ++ L+P +Q +
Sbjct: 450 ASFHCKSPRKMKLSKMDPSCCIGFYCETRKDFFKFVDNVKPFLQPAKQQM 499
>gi|225685095|gb|EEH23379.1| peptidase family C54 [Paracoccidioides brasiliensis Pb03]
Length = 508
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 15 SEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQI 59
+E++L+S YH + RLHI MDPS+ + FL K E+D+A +
Sbjct: 394 TEEELNS-YHTRRLRRLHIKDMDPSMLIGFLIKDEDDWADWKRNV 437
>gi|392572178|gb|EIW65350.1| hypothetical protein TRAVEDRAFT_33890 [Trametes versicolor
FP-101664 SS1]
Length = 997
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDP 77
T+HC + ++ + +DPS+ + FLCK E ++ L +I AEL + +F L +P
Sbjct: 701 TFHCDRVRKMPLSGLDPSMLLGFLCKDEAEWLDLKDRI-AELFRNNKSIFSLANEP 755
>gi|168693565|ref|NP_001108301.1| uncharacterized protein LOC100137698 [Xenopus laevis]
gi|163915830|gb|AAI57741.1| LOC100137698 protein [Xenopus laevis]
Length = 468
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRP----EQQPLFELIEDP 77
++HC ++ I MDPS F + +DF LC + L E+ P+F + E
Sbjct: 374 SFHCNTPRKISITRMDPSCTFAFYAQNRDDFGKLCDHLMKVLHSPHAEEKYPIFSISEGQ 433
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
++++ G S S + R+ +S S D+FEFL
Sbjct: 434 VQEYAE---------GLQSVSHPPVCRKKGPLS--TRSSSDEFEFL 468
>gi|119493442|ref|XP_001263911.1| peptidase family C54 protein [Neosartorya fischeri NRRL 181]
gi|119412071|gb|EAW22014.1| peptidase family C54 protein [Neosartorya fischeri NRRL 181]
Length = 179
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFE 72
TYH + R+HI MDPS+ + F+ K D+A S + + +P L E
Sbjct: 107 TYHTRRLRRIHIRDMDPSMLIGFIIKDREDWAHWKSGVSVQGKPIVHVLSE 157
>gi|145245643|ref|XP_001395089.1| cysteine protease atg4 [Aspergillus niger CBS 513.88]
gi|166990612|sp|A2QY50.1|ATG4_ASPNC RecName: Full=Probable cysteine protease atg4; AltName:
Full=Autophagy-related protein 4
gi|134079795|emb|CAK40930.1| unnamed protein product [Aspergillus niger]
Length = 404
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 15 SEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRA 61
S++++D TYH + R+H+ MDPS+ + FL + + D+A +I A
Sbjct: 325 SKEEVD-TYHTRRLRRIHVRDMDPSMLIGFLIRNQEDWADWLKRIEA 370
>gi|261195783|ref|XP_002624295.1| cysteine protease atg4 [Ajellomyces dermatitidis SLH14081]
gi|239587428|gb|EEQ70071.1| cysteine protease atg4 [Ajellomyces dermatitidis SLH14081]
Length = 494
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 12 EQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRA 61
+Q ++++L+ TYH + RLHI MDPS+ + FL + E+D+ + +R
Sbjct: 368 QQYTDEELN-TYHTRRLRRLHIKDMDPSMLIGFLIRDEDDWDNWKRNLRG 416
>gi|350631770|gb|EHA20141.1| hypothetical protein ASPNIDRAFT_178675 [Aspergillus niger ATCC
1015]
Length = 384
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 12 EQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRA 61
E S++++D TYH + R+H+ MDPS+ + FL + + D+A +I A
Sbjct: 302 ELYSKEEVD-TYHTRRLRRIHVRDMDPSMLIGFLIRNQEDWADWLKRIEA 350
>gi|315047608|ref|XP_003173179.1| cysteine protease atg4 [Arthroderma gypseum CBS 118893]
gi|311343565|gb|EFR02768.1| cysteine protease atg4 [Arthroderma gypseum CBS 118893]
Length = 471
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIR 60
STYH + RLH+ MDPS+ + L + E D+ L S+++
Sbjct: 396 STYHTRRLRRLHVREMDPSMLIGLLVRDEGDWEDLKSRVK 435
>gi|357507987|ref|XP_003624282.1| Cysteine protease ATG4 [Medicago truncatula]
gi|147742964|sp|A2Q1V6.1|ATG4_MEDTR RecName: Full=Cysteine protease ATG4; AltName:
Full=Autophagy-related protein 4
gi|124359485|gb|ABN05923.1| Peptidase C54 [Medicago truncatula]
gi|355499297|gb|AES80500.1| Cysteine protease ATG4 [Medicago truncatula]
Length = 487
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 8 VYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQ 67
V + D+++ S+YHC + + + +DPS+A+ F C+ ++DF CS RA E+
Sbjct: 376 VVNITGDTQEPNTSSYHCNISRHMPLDSIDPSLAIGFYCRDKDDFDDFCS--RATKLAEE 433
Query: 68 Q---PLFELIE 75
PLF + +
Sbjct: 434 SNGAPLFTVAQ 444
>gi|389750681|gb|EIM91754.1| hypothetical protein STEHIDRAFT_88418 [Stereum hirsutum FP-91666
SS1]
Length = 1286
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDP 77
T+HC + ++ + +DPS+ V FLC+ E D+ +++ A+L + +F + ++P
Sbjct: 840 TFHCERVRKMPLSGLDPSMLVGFLCRDEGDWEDFKARV-ADLSKTHKTIFSIHDEP 894
>gi|170032510|ref|XP_001844124.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167872594|gb|EDS35977.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 628
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ 68
S++HC ++ + MDPS + F C T DF ++ L P +Q
Sbjct: 496 SSFHCKSPRKMKLSKMDPSCCIGFYCATRKDFFKFVDNVKPFLLPAKQ 543
>gi|242814606|ref|XP_002486401.1| autophagy cysteine endopeptidase Atg4, putative [Talaromyces
stipitatus ATCC 10500]
gi|218714740|gb|EED14163.1| autophagy cysteine endopeptidase Atg4, putative [Talaromyces
stipitatus ATCC 10500]
Length = 454
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 15 SEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELI 74
+++++DS H + R+HI MDPS+ V FL + END+ +I + RPE I
Sbjct: 365 TQEEIDSC-HTRRLRRIHIDDMDPSMLVGFLIRDENDWMDWKRRITSS-RPENGKAIIHI 422
Query: 75 EDPIEDWTPTQPRPSNL 91
D TPT R + L
Sbjct: 423 VDTKNVPTPTMEREAAL 439
>gi|168010849|ref|XP_001758116.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690572|gb|EDQ76938.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 356
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ--PLFELIE 75
S+YHC RL + +DPS+A+ F C+ +F LC++ +EL + P+F + E
Sbjct: 301 SSYHCSTVRRLPLDTIDPSLAIGFYCRDRAEFDDLCAR-SSELAKQSNGAPMFTVAE 356
>gi|58260832|ref|XP_567826.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134117209|ref|XP_772831.1| hypothetical protein CNBK2020 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338817600|sp|P0CQ11.1|ATG4_CRYNB RecName: Full=Cysteine protease ATG4; AltName:
Full=Autophagy-related protein 4
gi|338817601|sp|P0CQ10.1|ATG4_CRYNJ RecName: Full=Cysteine protease ATG4; AltName:
Full=Autophagy-related protein 4
gi|50255449|gb|EAL18184.1| hypothetical protein CNBK2020 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229907|gb|AAW46309.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1193
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQI 59
TYHC + ++ + +DPS+ + F+CK E+DF ++
Sbjct: 952 TYHCEKIKKMPLSGLDPSMLLGFVCKDEDDFEDFVERV 989
>gi|295657177|ref|XP_002789160.1| autophagy-related protein 4 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284504|gb|EEH40070.1| autophagy-related protein 4 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 601
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Query: 15 SEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFA 53
+E++L+S YH + RLHI MDPS+ + FL K E+D+A
Sbjct: 485 TEEELNS-YHTRRLRRLHIKDMDPSMLIGFLIKDEDDWA 522
>gi|178057055|ref|NP_001116551.1| cysteine protease ATG4D [Sus scrofa]
gi|61211337|sp|Q684M2.1|ATG4D_PIG RecName: Full=Cysteine protease ATG4D; AltName: Full=Autophagin-4;
AltName: Full=Autophagy-related protein 4 homolog D
gi|51870495|emb|CAG15153.1| AUT-like 4, cysteine endopeptidase [Sus scrofa]
Length = 469
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 14/108 (12%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F L+E
Sbjct: 370 SFHCTSPRKMAFTKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSATERYPMFTLVEGH 429
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPR--RVSGVGEGSDDDFEFL 123
+D +L S R PR R+ S +DF FL
Sbjct: 430 AQD--------HSLDDLCSQPSQPTLRLPRTGRLLKAKRPSSEDFVFL 469
>gi|449442361|ref|XP_004138950.1| PREDICTED: cysteine protease ATG4-like [Cucumis sativus]
gi|449512710|ref|XP_004164121.1| PREDICTED: cysteine protease ATG4-like [Cucumis sativus]
Length = 483
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 8 VYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQ 67
V + ++D + S+YHC + + +DPS+A+ F C+ ++DF + C RA E+
Sbjct: 371 VVNIDKDDLEADTSSYHCNVIRHIPLESIDPSLAIGFYCRDKDDFDNFCH--RASKLAEE 428
Query: 68 Q---PLFELIE 75
PLF + E
Sbjct: 429 SDGAPLFTVAE 439
>gi|405119256|gb|AFR94029.1| peptidase family C54 protein [Cryptococcus neoformans var. grubii
H99]
Length = 1185
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQI 59
TYHC + ++ + +DPS+ + F+CK E+DF ++
Sbjct: 946 TYHCEKIKKMPLSGLDPSMLLGFVCKDEDDFEDFVERV 983
>gi|410950450|ref|XP_003981918.1| PREDICTED: cysteine protease ATG4D, partial [Felis catus]
Length = 423
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 44/108 (40%), Gaps = 14/108 (12%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F L E
Sbjct: 324 SFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLSCSSATERYPMFTLAEGH 383
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPR--RVSGVGEGSDDDFEFL 123
+D +L S R PR R+ S DDF FL
Sbjct: 384 AQD--------HSLDDLCSQLSQPTLRLPRTGRLLKAKRPSSDDFVFL 423
>gi|388514549|gb|AFK45336.1| unknown [Lotus japonicus]
Length = 489
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 14 DSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ---PL 70
D++ S+YHC ++ + +DPS+A+ F C+ ++DF CS RA E+ PL
Sbjct: 383 DAQDPNTSSYHCNIVRQMPLDSIDPSLAIGFYCRDKDDFDDFCS--RASKLAEESNGAPL 440
Query: 71 FELIE 75
F + +
Sbjct: 441 FTVAQ 445
>gi|393219109|gb|EJD04597.1| hypothetical protein FOMMEDRAFT_133827 [Fomitiporia mediterranea
MF3/22]
Length = 1147
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDP 77
T+HC + ++ + +DPS+ + FLC+ E D+ L ++ E+ + +F + ++P
Sbjct: 728 TFHCDRVRKMPLSSLDPSMLIGFLCRDERDWKDLRERV-TEMSRRYKAIFSIQDEP 782
>gi|384253649|gb|EIE27123.1| peptidase C54 [Coccomyxa subellipsoidea C-169]
Length = 362
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 11 KEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIR 60
+E SE TY C + + ++DPS+A+ F C + +DF LC ++R
Sbjct: 256 QEVASEAADLDTYFCSSLRLMPLANIDPSLAIGFYCSSLSDFEDLCGRLR 305
>gi|440798079|gb|ELR19150.1| cysteine protease, putative [Acanthamoeba castellanii str. Neff]
Length = 434
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIE 75
T+HC RL I +DPS+ + F C+ DF C++ +L P+F + E
Sbjct: 353 TFHCSAPLRLPIRDIDPSLCLAFYCRNREDFDDFCARA-IQLSEGPMPIFTVAE 405
>gi|393247625|gb|EJD55132.1| hypothetical protein AURDEDRAFT_78065 [Auricularia delicata
TFB-10046 SS5]
Length = 989
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDP 77
T+HC + ++ + +DPS+ + FLC+ E D+ ++ AE+ + LF + E+P
Sbjct: 702 TFHCDRVRKMPLSGLDPSMLLGFLCRDEQDWKDFRRRM-AEISKGRDTLFSIQEEP 756
>gi|281210274|gb|EFA84441.1| autophagy protein 4 [Polysphondylium pallidum PN500]
Length = 734
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 20 DSTYHC-PQASRLHILHMDPSIAVCFLCKTENDFASLCSQIR 60
DS +HC PQ ++ I +DPS+A+ F C T++DF C +I+
Sbjct: 616 DSYHHCVPQ--KMLISQLDPSMAIGFYCHTQSDFEDFCVRIK 655
>gi|225554849|gb|EEH03143.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 425
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQI 59
+TYH + RLHI MDPS+ + FL + E+D+ S +
Sbjct: 301 NTYHTRRLRRLHIKDMDPSMLIGFLIRDEDDWNSWKRSV 339
>gi|224092798|ref|XP_002309707.1| predicted protein [Populus trichocarpa]
gi|222852610|gb|EEE90157.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 8 VYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQ 67
V + +D + S+YHC + + +DPS+A+ F C+ ++DF CS + ++L E
Sbjct: 375 VVNFSRDDVEANTSSYHCDVVRHIPLDLIDPSLAIGFYCRDKDDFDDFCS-LASKLADES 433
Query: 68 Q--PLFEL 73
PLF +
Sbjct: 434 NGAPLFTV 441
>gi|427787309|gb|JAA59106.1| Putative peptidase family c54 [Rhipicephalus pulchellus]
Length = 517
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 19 LDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRP----EQQPLFELI 74
LDS YHC ++ MDPS + F CKTE++F ++ P + P+F +
Sbjct: 419 LDS-YHCSWPRKMSFYKMDPSCTMGFYCKTEDEFEHFVKDVKQLAVPTESRHEYPVFLVS 477
Query: 75 EDPIEDWTPT 84
E D T T
Sbjct: 478 EGSCADHTDT 487
>gi|154281231|ref|XP_001541428.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411607|gb|EDN06995.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 463
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFAS 54
+TYH + RLHI MDPS+ + FL + E+D+ S
Sbjct: 338 NTYHTRRLRRLHIKDMDPSMLIGFLIRDEDDWNS 371
>gi|317151014|ref|XP_001824388.2| cysteine protease atg4 [Aspergillus oryzae RIB40]
Length = 402
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDF 52
STYH + R+HI MDPS+ + FL + E+D+
Sbjct: 328 STYHTRRLRRIHIQDMDPSMLIGFLVRNEDDW 359
>gi|325091702|gb|EGC45012.1| cysteine protease [Ajellomyces capsulatus H88]
Length = 508
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFAS 54
+TYH + RLHI MDPS+ + FL + E+D+ S
Sbjct: 384 NTYHTRRLRRLHIKDMDPSMLIGFLIRDEDDWNS 417
>gi|166990665|sp|Q2U5B0.2|ATG4_ASPOR RecName: Full=Probable cysteine protease atg4; AltName:
Full=Autophagy-related protein 4
Length = 407
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDF 52
STYH + R+HI MDPS+ + FL + E+D+
Sbjct: 333 STYHTRRLRRIHIQDMDPSMLIGFLVRNEDDW 364
>gi|296415785|ref|XP_002837566.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633439|emb|CAZ81757.1| unnamed protein product [Tuber melanosporum]
Length = 409
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 13 QDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFE 72
QD ++ T H + RLHI MDPS+ + FL + E D+ +I PE++ +
Sbjct: 326 QDYTEEEVDTCHTRRIRRLHIREMDPSMLIAFLIRDEADWEDWQRRIS---EPEKKVILV 382
Query: 73 LIEDPIEDWTPTQ 85
+P W P +
Sbjct: 383 SDSEPSGSWVPRE 395
>gi|240274226|gb|EER37743.1| cysteine protease atg4 [Ajellomyces capsulatus H143]
Length = 454
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFAS 54
+TYH + RLHI MDPS+ + FL + E+D+ S
Sbjct: 330 NTYHTRRLRRLHIKDMDPSMLIGFLIRDEDDWNS 363
>gi|391868733|gb|EIT77943.1| cysteine protease required for autophagy - Apg4p/Aut2p [Aspergillus
oryzae 3.042]
Length = 357
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDF 52
STYH + R+HI MDPS+ + FL + E+D+
Sbjct: 282 STYHTRRLRRIHIQDMDPSMLIGFLVRNEDDW 313
>gi|390344344|ref|XP_786847.3| PREDICTED: uncharacterized protein LOC581768 [Strongylocentrotus
purpuratus]
Length = 1018
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRP-----EQQPLFELIED 76
++HC ++ I MDPS + F +TE F LC ++ + P P+F + +
Sbjct: 914 SFHCMSPRKMSISKMDPSCTIGFYIRTEEQFEQLCKELPTVVSPLGSHSSDYPMFIVRDG 973
Query: 77 PIEDW 81
DW
Sbjct: 974 RCGDW 978
>gi|83773128|dbj|BAE63255.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|325504923|dbj|BAJ83603.1| cysteine protease Atg4 [Aspergillus oryzae]
Length = 356
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDF 52
STYH + R+HI MDPS+ + FL + E+D+
Sbjct: 282 STYHTRRLRRIHIQDMDPSMLIGFLVRNEDDW 313
>gi|353227348|emb|CCA77858.1| hypothetical protein PIIN_00505 [Piriformospora indica DSM 11827]
Length = 1257
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDP 77
T+HC + ++ + +DPS+ + FLC+ E ++ L ++ AE+ ++ +F + ++P
Sbjct: 794 TFHCERVRKMPLSALDPSMLLGFLCRNEEEWKDLRERL-AEMARTKKAIFSVQDEP 848
>gi|238506146|ref|XP_002384275.1| autophagy cysteine endopeptidase Atg4, putative [Aspergillus flavus
NRRL3357]
gi|220690389|gb|EED46739.1| autophagy cysteine endopeptidase Atg4, putative [Aspergillus flavus
NRRL3357]
Length = 439
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDF 52
STYH + R+HI MDPS+ + FL + E+D+
Sbjct: 364 STYHTRRLRRIHIQDMDPSMLIGFLVRNEDDW 395
>gi|194378178|dbj|BAG57839.1| unnamed protein product [Homo sapiens]
Length = 411
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 44/108 (40%), Gaps = 14/108 (12%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC R+ MDPS V F +F +LCS++ L E+ P+F L E
Sbjct: 312 SFHCTSPRRMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSATERYPMFTLAEGH 371
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPR--RVSGVGEGSDDDFEFL 123
+D +L S R PR R+ S +DF FL
Sbjct: 372 AQD--------HSLDDLCSQLAQPTLRLPRTGRLLRAKRPSSEDFVFL 411
>gi|395323681|gb|EJF56143.1| hypothetical protein DICSQDRAFT_113447 [Dichomitus squalens
LYAD-421 SS1]
Length = 999
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDP 77
T+HC + ++ + +DPS+ + FLCK E ++ L +I EL + +F L +P
Sbjct: 704 TFHCDRVRKMPLSGLDPSMLLGFLCKDEAEWLDLKERI-TELFRTNKSIFSLANEP 758
>gi|449551395|gb|EMD42359.1| ATG4-like protein [Ceriporiopsis subvermispora B]
Length = 988
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDP 77
T+HC + ++ + +DPS+ + FLCK E D+ L +I +L + +F + ++P
Sbjct: 693 TFHCERIRKMPLSGLDPSMLIGFLCKDEEDWLDLRKRI-TDLSRTHKTIFSIQDEP 747
>gi|428184439|gb|EKX53294.1| hypothetical protein GUITHDRAFT_133035 [Guillardia theta CCMP2712]
Length = 567
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 13/53 (24%), Positives = 29/53 (54%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFEL 73
+++HC ++ + H+DPS+A+ F C ++DF L ++ + P+ +
Sbjct: 491 ASFHCAHPGKMSLAHIDPSLALGFYCDDKSDFEDLIRRVEELAAGDSHPILSV 543
>gi|57101974|ref|XP_542069.1| PREDICTED: cysteine protease ATG4D isoform 1 [Canis lupus
familiaris]
Length = 473
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS V F + +F +LCS++ L E+ P+F L E
Sbjct: 374 SFHCTSPRKMAFAKMDPSCTVGFYAGDQKEFETLCSELTRVLSSSSATERYPMFTLAEGH 433
Query: 78 IED 80
+D
Sbjct: 434 AQD 436
>gi|224117658|ref|XP_002331599.1| predicted protein [Populus trichocarpa]
gi|222873995|gb|EEF11126.1| predicted protein [Populus trichocarpa]
Length = 482
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 8 VYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQ 67
V + +D + S+YHC + + +DPS+A+ F C+ ++DF C+ + ++L E
Sbjct: 376 VVNVSRDDVEANTSSYHCNVVRHMPLDLIDPSLAIGFYCRDKDDFDDFCT-LASKLTDES 434
Query: 68 Q--PLFEL 73
PLF +
Sbjct: 435 NGAPLFTV 442
>gi|336381646|gb|EGO22797.1| cysteine protease required for autophagy [Serpula lacrymans var.
lacrymans S7.9]
Length = 992
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDP 77
T+HC + ++ + +DPS+ + FLCK END+ ++ +L + +F + ++P
Sbjct: 708 TFHCDRVRKMPMSGLDPSMLLGFLCKDENDWFDFRRRVN-DLMHRHKTIFTVQDEP 762
>gi|301772016|ref|XP_002921445.1| PREDICTED: cysteine protease ATG4D-like [Ailuropoda melanoleuca]
Length = 445
Score = 38.1 bits (87), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 14/108 (12%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS V F + +F +LCS++ L E+ P+F L E
Sbjct: 346 SFHCTSPRKMAFAKMDPSCTVGFYAGDQKEFETLCSELTRVLSSSSATERYPMFTLAEGH 405
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPR--RVSGVGEGSDDDFEFL 123
+D +L S R PR R+ S +DF FL
Sbjct: 406 AQD--------HSLDDLCSQLSQPTLRLPRTGRLLKAKRPSSEDFVFL 445
>gi|403296347|ref|XP_003939073.1| PREDICTED: cysteine protease ATG4D [Saimiri boliviensis
boliviensis]
Length = 463
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F L E
Sbjct: 364 SFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSATERYPMFTLAEGH 423
Query: 78 IED 80
+D
Sbjct: 424 AQD 426
>gi|281337397|gb|EFB12981.1| hypothetical protein PANDA_010312 [Ailuropoda melanoleuca]
Length = 428
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 14/108 (12%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS V F + +F +LCS++ L E+ P+F L E
Sbjct: 329 SFHCTSPRKMAFAKMDPSCTVGFYAGDQKEFETLCSELTRVLSSSSATERYPMFTLAEGH 388
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPR--RVSGVGEGSDDDFEFL 123
+D +L S R PR R+ S +DF FL
Sbjct: 389 AQD--------HSLDDLCSQLSQPTLRLPRTGRLLKAKRPSSEDFVFL 428
>gi|291414155|ref|XP_002723329.1| PREDICTED: APG4 autophagy 4 homolog D [Oryctolagus cuniculus]
Length = 408
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAEL----RPEQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F L E
Sbjct: 309 SFHCTSPRKMAFAKMDPSCTVGFYAGGRKEFETLCSELTRVLGSSSATERYPMFTLAEGH 368
Query: 78 IED 80
+D
Sbjct: 369 AQD 371
>gi|395850895|ref|XP_003798008.1| PREDICTED: cysteine protease ATG4D [Otolemur garnettii]
Length = 471
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRP----EQQPLFELIEDP 77
++HC ++ MDPS V F + +F +LCS++ L E+ P+F L E
Sbjct: 372 SFHCTAPRKMAFTKMDPSCTVGFYAGGKKEFETLCSELTRVLSSSSAMERYPMFTLAEGH 431
Query: 78 IED 80
+D
Sbjct: 432 AQD 434
>gi|355703136|gb|EHH29627.1| Cysteine protease ATG4D [Macaca mulatta]
Length = 511
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAEL----RPEQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F L E
Sbjct: 412 SFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLGSSSATERYPMFTLAEGH 471
Query: 78 IED 80
+D
Sbjct: 472 AQD 474
>gi|168036750|ref|XP_001770869.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677928|gb|EDQ64393.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 346
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ--PLFELIE 75
S YHC RL + +DPS+A+ F C+ +F LC++ +EL + P+F + E
Sbjct: 285 SFYHCSVVRRLPLDSIDPSLAIGFYCRDRAEFDDLCAR-SSELVKQYNGAPIFTVAE 340
>gi|336368847|gb|EGN97189.1| cysteine protease required for autophagy [Serpula lacrymans var.
lacrymans S7.3]
Length = 873
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDP 77
T+HC + ++ + +DPS+ + FLCK END+ R L + +F + ++P
Sbjct: 592 TFHCDRVRKMPMSGLDPSMLLGFLCKDENDWFDF----RRRLMHRHKTIFTVQDEP 643
>gi|297276108|ref|XP_002801111.1| PREDICTED: cysteine protease ATG4D-like isoform 2 [Macaca mulatta]
Length = 497
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAEL----RPEQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F L E
Sbjct: 398 SFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLGSSSATERYPMFTLAEGH 457
Query: 78 IED 80
+D
Sbjct: 458 AQD 460
>gi|147905876|ref|NP_001088249.1| cysteine protease ATG4C [Xenopus laevis]
gi|61211751|sp|Q5XH30.1|ATG4C_XENLA RecName: Full=Cysteine protease ATG4C; AltName:
Full=Autophagy-related protein 4 homolog C
gi|54038152|gb|AAH84245.1| LOC495080 protein [Xenopus laevis]
Length = 450
Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
++HCP ++ MDPS V F C+ +F ++ L+ + PLF +
Sbjct: 355 SFHCPSPKKMSFKKMDPSCTVGFYCRNAREFEKAAEELTKVLKSSTKQNYPLFTFVNGHA 414
Query: 79 ED 80
+D
Sbjct: 415 QD 416
>gi|402904206|ref|XP_003914938.1| PREDICTED: cysteine protease ATG4D isoform 1 [Papio anubis]
Length = 474
Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F L E
Sbjct: 375 SFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSATERYPMFTLAEGH 434
Query: 78 IED 80
+D
Sbjct: 435 AQD 437
>gi|109123366|ref|XP_001101860.1| PREDICTED: cysteine protease ATG4D-like isoform 1 [Macaca mulatta]
Length = 474
Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAEL----RPEQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F L E
Sbjct: 375 SFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLGSSSATERYPMFTLAEGH 434
Query: 78 IED 80
+D
Sbjct: 435 AQD 437
>gi|87309026|ref|ZP_01091164.1| general stress protein 26, putative [Blastopirellula marina DSM
3645]
gi|87288369|gb|EAQ80265.1| general stress protein 26, putative [Blastopirellula marina DSM
3645]
Length = 172
Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 34 LHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPIEDWTPTQPRPSNLG 92
L +P + VC+ T +DF SL RAE+ +Q+ + L D + DW P NL
Sbjct: 65 LTANPQVNVCYGSPTHDDFVSLSG--RAEVVKDQKRIEALWNDHLNDWFPDGVETPNLA 121
>gi|406698456|gb|EKD01693.1| hypothetical protein A1Q2_04064 [Trichosporon asahii var. asahii
CBS 8904]
Length = 1295
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQI 59
T+HC + +L + +DPS+ + FLC E +F C ++
Sbjct: 936 TFHCDRVKKLPLSGLDPSMLLGFLCTNEAEFEDFCERV 973
>gi|410226434|gb|JAA10436.1| ATG4 autophagy related 4 homolog D [Pan troglodytes]
gi|410263516|gb|JAA19724.1| ATG4 autophagy related 4 homolog D [Pan troglodytes]
gi|410294648|gb|JAA25924.1| ATG4 autophagy related 4 homolog D [Pan troglodytes]
gi|410328737|gb|JAA33315.1| ATG4 autophagy related 4 homolog D [Pan troglodytes]
Length = 474
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F L E
Sbjct: 375 SFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSATERYPMFTLAEGH 434
Query: 78 IED 80
+D
Sbjct: 435 AQD 437
>gi|344282757|ref|XP_003413139.1| PREDICTED: cysteine protease ATG4D-like [Loxodonta africana]
Length = 473
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F L E
Sbjct: 374 SFHCTSPRKMAFTKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSATERYPMFTLAEGH 433
Query: 78 IED 80
+D
Sbjct: 434 AQD 436
>gi|308491308|ref|XP_003107845.1| CRE-ATG-4.2 protein [Caenorhabditis remanei]
gi|308249792|gb|EFO93744.1| CRE-ATG-4.2 protein [Caenorhabditis remanei]
Length = 518
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 13 QDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDF 52
+ S+K + +YHC S++H L MDPS A+CF ++ F
Sbjct: 415 KKSKKCPERSYHCRLLSKMHFLDMDPSCALCFRFESREQF 454
>gi|27903825|ref|NP_116274.3| cysteine protease ATG4D [Homo sapiens]
gi|61211809|sp|Q86TL0.1|ATG4D_HUMAN RecName: Full=Cysteine protease ATG4D; AltName: Full=AUT-like 4
cysteine endopeptidase; AltName: Full=Autophagin-4;
AltName: Full=Autophagy-related cysteine endopeptidase
4; AltName: Full=Autophagy-related protein 4 homolog D
gi|27763975|emb|CAC85951.1| APG4-D protein [Homo sapiens]
gi|46362497|gb|AAH68992.1| ATG4 autophagy related 4 homolog D (S. cerevisiae) [Homo sapiens]
gi|119604524|gb|EAW84118.1| ATG4 autophagy related 4 homolog D (S. cerevisiae), isoform CRA_c
[Homo sapiens]
gi|312151144|gb|ADQ32084.1| ATG4 autophagy related 4 homolog D (S. cerevisiae) [synthetic
construct]
Length = 474
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F L E
Sbjct: 375 SFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSATERYPMFTLAEGH 434
Query: 78 IED 80
+D
Sbjct: 435 AQD 437
>gi|401886473|gb|EJT50506.1| hypothetical protein A1Q1_00204 [Trichosporon asahii var. asahii
CBS 2479]
Length = 1295
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQI 59
T+HC + +L + +DPS+ + FLC E +F C ++
Sbjct: 936 TFHCDRVKKLPLSGLDPSMLLGFLCTNEAEFEDFCERV 973
>gi|358369016|dbj|GAA85631.1| autophagy cysteine endopeptidase Atg4 [Aspergillus kawachii IFO
4308]
Length = 378
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 15 SEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRA 61
S++++D TYH + R+H+ MDPS+ + FL + + D+ ++I+A
Sbjct: 299 SKEEVD-TYHTRRLRRIHVRDMDPSMLIGFLIRDQEDWDDWLNRIQA 344
>gi|296232881|ref|XP_002761778.1| PREDICTED: cysteine protease ATG4D [Callithrix jacchus]
Length = 474
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F L E
Sbjct: 375 SFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSAATERYPMFTLAEGH 434
Query: 78 IED 80
+D
Sbjct: 435 AQD 437
>gi|62898327|dbj|BAD97103.1| APG4 autophagy 4 homolog D variant [Homo sapiens]
Length = 474
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F L E
Sbjct: 375 SFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSATERYPMFTLAEGH 434
Query: 78 IED 80
+D
Sbjct: 435 AQD 437
>gi|195444549|ref|XP_002069918.1| GK11310 [Drosophila willistoni]
gi|194166003|gb|EDW80904.1| GK11310 [Drosophila willistoni]
Length = 676
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRP 65
++HC ++ MDPS + F C T++DF SL ++ L P
Sbjct: 538 SFHCKSPRKIKTSKMDPSCCIGFYCATKSDFDSLMENVQLYLHP 581
>gi|397476490|ref|XP_003809632.1| PREDICTED: cysteine protease ATG4D isoform 1 [Pan paniscus]
Length = 474
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRP----EQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F L E
Sbjct: 375 SFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSAMERYPMFTLAEGH 434
Query: 78 IED 80
+D
Sbjct: 435 AQD 437
>gi|380796527|gb|AFE70139.1| cysteine protease ATG4D, partial [Macaca mulatta]
Length = 439
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAEL----RPEQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F L E
Sbjct: 340 SFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLGSSSATERYPMFTLAEGH 399
Query: 78 IED 80
+D
Sbjct: 400 AQD 402
>gi|425778592|gb|EKV16710.1| Autophagy cysteine endopeptidase Atg4, putative [Penicillium
digitatum PHI26]
Length = 401
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 12/82 (14%)
Query: 12 EQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLF 71
E ++++LDS Y+ + R+HI MDPS+ + FL K E D+A ++++ QP+
Sbjct: 314 ELYTQEELDS-YYTSRLRRIHIKDMDPSMLIGFLIKDEEDWADWKKRVQST---PGQPIV 369
Query: 72 ELIEDPIEDWTPTQPRPSNLGG 93
++ P Q +P N G
Sbjct: 370 HML--------PCQHQPDNGQG 383
>gi|355755452|gb|EHH59199.1| Cysteine protease ATG4D, partial [Macaca fascicularis]
Length = 427
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAEL----RPEQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F L E
Sbjct: 328 SFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLGSSSATERYPMFTLAEGH 387
Query: 78 IED 80
+D
Sbjct: 388 AQD 390
>gi|347971093|ref|XP_554420.4| AGAP004023-PA [Anopheles gambiae str. PEST]
gi|333469628|gb|EAL39379.4| AGAP004023-PA [Anopheles gambiae str. PEST]
Length = 606
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQ 67
+++HC ++ + MDPS + F C+T+ DF ++ L P Q
Sbjct: 476 ASFHCKSPRKMKLSKMDPSCCIGFYCETKKDFYKFIDSVKPFLIPVQ 522
>gi|194213171|ref|XP_001491090.2| PREDICTED: cysteine protease ATG4D [Equus caballus]
Length = 424
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F L E
Sbjct: 325 SFHCTSPRKMAFTKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSATERYPMFTLAEGH 384
Query: 78 IED 80
+D
Sbjct: 385 AQD 387
>gi|351710014|gb|EHB12933.1| Cysteine protease ATG4D [Heterocephalus glaber]
Length = 607
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS V F + +LCS++ L E+ P+F L+E
Sbjct: 507 SFHCTSPRKMAFAKMDPSCTVGFYAGNRKELETLCSELTRILSSSSATERYPMFTLVEGH 566
Query: 78 IED 80
+D
Sbjct: 567 AQD 569
>gi|417401539|gb|JAA47652.1| Putative cysteine protease required for autophagy [Desmodus
rotundus]
Length = 473
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F L E
Sbjct: 374 SFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSTTERYPMFTLAEGH 433
Query: 78 IED 80
+D
Sbjct: 434 AQD 436
>gi|119604525|gb|EAW84119.1| ATG4 autophagy related 4 homolog D (S. cerevisiae), isoform CRA_d
[Homo sapiens]
Length = 360
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F L E
Sbjct: 261 SFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSATERYPMFTLAEGH 320
Query: 78 IED 80
+D
Sbjct: 321 AQD 323
>gi|56118282|ref|NP_001007883.1| cysteine protease ATG4C [Xenopus (Silurana) tropicalis]
gi|61211764|sp|Q68EP9.1|ATG4C_XENTR RecName: Full=Cysteine protease ATG4C; AltName:
Full=Autophagy-related protein 4 homolog C
gi|51258902|gb|AAH80152.1| apg4c protein [Xenopus (Silurana) tropicalis]
gi|89269108|emb|CAJ81923.1| APG4 autophagy 4 homolog C (S. cerevisiae) [Xenopus (Silurana)
tropicalis]
Length = 450
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
++HCP ++ MDPS + F C+ +F ++ L+ + PLF +
Sbjct: 355 SFHCPSPKKMSFKKMDPSCTIGFYCRNAREFEKAAEELTKVLKSSTKQNYPLFTFVNGHA 414
Query: 79 ED 80
+D
Sbjct: 415 QD 416
>gi|166990662|sp|A7F045.2|ATG4_SCLS1 RecName: Full=Probable cysteine protease atg4; AltName:
Full=Autophagy-related protein 4
Length = 439
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 24 HCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIR 60
H + RLHI MDPS+ + FL + END+ +R
Sbjct: 358 HTRRLRRLHIKEMDPSMLIAFLIRDENDWKDWRRAVR 394
>gi|359495820|ref|XP_003635099.1| PREDICTED: cysteine protease ATG4-like [Vitis vinifera]
gi|296086874|emb|CBI33041.3| unnamed protein product [Vitis vinifera]
Length = 486
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 8 VYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQ 67
V D +++ + S+YHC + + +DPS+A+ F C+ ++DF C IRA ++
Sbjct: 370 VVDIRRENLEADTSSYHCNIIRHICLDSIDPSLAIGFYCRDKDDFDDFC--IRASKLADK 427
Query: 68 Q---PLFEL 73
PLF +
Sbjct: 428 SNGAPLFTV 436
>gi|441628985|ref|XP_004093160.1| PREDICTED: LOW QUALITY PROTEIN: cysteine protease ATG4D [Nomascus
leucogenys]
Length = 441
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRP----EQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F L E
Sbjct: 342 SFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSAMERYPMFTLAEGH 401
Query: 78 IED 80
+D
Sbjct: 402 AQD 404
>gi|348550913|ref|XP_003461275.1| PREDICTED: LOW QUALITY PROTEIN: cysteine protease ATG4D-like [Cavia
porcellus]
Length = 474
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS V F +F +LC+++ L E+ P+F L E
Sbjct: 374 SFHCTSPRKMAFAKMDPSCTVGFYAGNRKEFETLCAELTRILSCSSATERYPMFTLAEGH 433
Query: 78 IED 80
+D
Sbjct: 434 AQD 436
>gi|114675367|ref|XP_512373.2| PREDICTED: cysteine protease ATG4D [Pan troglodytes]
Length = 411
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 14/108 (12%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F L E
Sbjct: 312 SFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSATERYPMFTLAEGH 371
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPR--RVSGVGEGSDDDFEFL 123
+D +L S R PR R+ S +DF FL
Sbjct: 372 AQD--------HSLDDLCSQLAQPTLRLPRTGRLLRAKRPSSEDFVFL 411
>gi|426387285|ref|XP_004060104.1| PREDICTED: cysteine protease ATG4D [Gorilla gorilla gorilla]
Length = 362
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F L E
Sbjct: 263 SFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSATERYPMFTLAEGH 322
Query: 78 IED 80
+D
Sbjct: 323 AQD 325
>gi|397476492|ref|XP_003809633.1| PREDICTED: cysteine protease ATG4D isoform 2 [Pan paniscus]
Length = 411
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 14/108 (12%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRP----EQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F L E
Sbjct: 312 SFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSAMERYPMFTLAEGH 371
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPR--RVSGVGEGSDDDFEFL 123
+D +L S R PR R+ S +DF FL
Sbjct: 372 AQD--------HSLDDLCSQLAQPTLRLPRTGRLLRAKRPSSEDFVFL 411
>gi|156042330|ref|XP_001587722.1| hypothetical protein SS1G_10962 [Sclerotinia sclerotiorum 1980]
gi|154695349|gb|EDN95087.1| hypothetical protein SS1G_10962 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 414
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 24 HCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIR 60
H + RLHI MDPS+ + FL + END+ +R
Sbjct: 333 HTRRLRRLHIKEMDPSMLIAFLIRDENDWKDWRRAVR 369
>gi|348529755|ref|XP_003452378.1| PREDICTED: cysteine protease ATG4C-like [Oreochromis niloticus]
Length = 478
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRP---EQQPLFELIE 75
+YHCP ++ MDPS V F ++ D+ + ++ L+P E+ P F ++
Sbjct: 384 SYHCPSPKKMPFSKMDPSCTVGFYSRSVQDYERISQELSKLLQPSAKEKYPAFTFVQ 440
>gi|212545090|ref|XP_002152699.1| autophagy cysteine endopeptidase Atg4, putative [Talaromyces
marneffei ATCC 18224]
gi|210065668|gb|EEA19762.1| autophagy cysteine endopeptidase Atg4, putative [Talaromyces
marneffei ATCC 18224]
Length = 489
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 18 KLDSTY--------HCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQP 69
K+DS Y H + R+HI MDPS+ V FL + END+ +I + +
Sbjct: 394 KVDSAYTQEQVDSCHTRRLRRIHIDDMDPSMLVGFLIRDENDWIDWKRRIASSREGNGKA 453
Query: 70 LFELIEDPIEDWTPTQPRPSNL 91
+ +I D TPT R + L
Sbjct: 454 IIHII-DTESVPTPTMEREAAL 474
>gi|29135261|ref|NP_705811.8| cysteine protease ATG4D [Mus musculus]
gi|61211815|sp|Q8BGV9.1|ATG4D_MOUSE RecName: Full=Cysteine protease ATG4D; AltName: Full=AUT-like 4
cysteine endopeptidase; AltName: Full=Autophagin-4;
AltName: Full=Autophagy-related cysteine endopeptidase
4; AltName: Full=Autophagy-related protein 4 homolog D
gi|26331508|dbj|BAC29484.1| unnamed protein product [Mus musculus]
gi|26348941|dbj|BAC38110.1| unnamed protein product [Mus musculus]
gi|27763977|emb|CAC85952.1| APG4-D protein [Mus musculus]
gi|47125055|gb|AAH69851.1| Autophagy-related 4D (yeast) [Mus musculus]
gi|148693226|gb|EDL25173.1| autophagy-related 4D (yeast), isoform CRA_b [Mus musculus]
Length = 474
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F + E
Sbjct: 375 SFHCTSPRKMAFAKMDPSCTVGFYAGNRKEFETLCSELMRILSSSSVTERYPMFTVAEGH 434
Query: 78 IED 80
+D
Sbjct: 435 AQD 437
>gi|17544636|ref|NP_502208.1| Protein ATG-4.2 [Caenorhabditis elegans]
gi|5824904|emb|CAB54515.1| Protein ATG-4.2 [Caenorhabditis elegans]
Length = 521
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 7 GVYDKEQDSEKKL-DSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQI 59
V D + KK + +YHC S++H MDPS A+CF ++ F + Q+
Sbjct: 411 NVVDSDSKKAKKCPEKSYHCRLLSKMHFFDMDPSCALCFQFESREQFDNDMRQL 464
>gi|26349259|dbj|BAC38269.1| unnamed protein product [Mus musculus]
Length = 474
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F + E
Sbjct: 375 SFHCTSPRKMAFAKMDPSCTVGFYAGNRKEFETLCSELMRILSSSSVTERYPMFTVAEGH 434
Query: 78 IED 80
+D
Sbjct: 435 AQD 437
>gi|380485578|emb|CCF39271.1| cysteine protease atg4 [Colletotrichum higginsianum]
Length = 454
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 10 DKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIR 60
D SE +D T H + RLH+ +DPS+ V FL + E+D+A ++
Sbjct: 360 DPSHYSEADVD-TVHTRRLRRLHVRELDPSMLVGFLIRDEDDWAEWRRNVK 409
>gi|22658287|gb|AAH30861.1| Autophagy-related 4D (yeast) [Mus musculus]
gi|74152222|dbj|BAE32395.1| unnamed protein product [Mus musculus]
Length = 474
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F + E
Sbjct: 375 SFHCTSPRKMAFAKMDPSCTVGFYAGNRKEFETLCSELMRILSSSSVTERYPMFTVAEGH 434
Query: 78 IED 80
+D
Sbjct: 435 AQD 437
>gi|210032083|ref|NP_001094483.2| autophagy-related 4D [Rattus norvegicus]
gi|149020504|gb|EDL78309.1| rCG31864, isoform CRA_b [Rattus norvegicus]
Length = 473
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F + E
Sbjct: 374 SFHCTSPRKMAFAKMDPSCTVGFYAGNRKEFETLCSELMRILSSSSVTERYPMFTVAEGH 433
Query: 78 IED 80
+D
Sbjct: 434 AQD 436
>gi|402904208|ref|XP_003914939.1| PREDICTED: cysteine protease ATG4D isoform 2 [Papio anubis]
Length = 411
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F L E
Sbjct: 312 SFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSATERYPMFTLAEGH 371
Query: 78 IED 80
+D
Sbjct: 372 AQD 374
>gi|195539710|gb|AAI68141.1| Atg4d protein [Rattus norvegicus]
Length = 442
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F + E
Sbjct: 343 SFHCTSPRKMAFAKMDPSCTVGFYAGNRKEFETLCSELMRILSSSSVTERYPMFTVAEGH 402
Query: 78 IED 80
+D
Sbjct: 403 AQD 405
>gi|268536436|ref|XP_002633353.1| Hypothetical protein CBG06097 [Caenorhabditis briggsae]
Length = 411
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 20 DSTYHCPQASRLHILHMDPSIAVCFLCKTENDF 52
+ +YHC S++H L MDPS A+CF ++ F
Sbjct: 315 ERSYHCRLLSKMHFLDMDPSCALCFRFESREQF 347
>gi|308456700|ref|XP_003090772.1| hypothetical protein CRE_09876 [Caenorhabditis remanei]
gi|308260727|gb|EFP04680.1| hypothetical protein CRE_09876 [Caenorhabditis remanei]
Length = 114
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 13 QDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDF 52
+ S+K + +YHC S++H L MDPS A+CF ++ F
Sbjct: 11 KKSKKCPERSYHCRLLSKMHFLDMDPSCALCFRFESREQF 50
>gi|302787965|ref|XP_002975752.1| hypothetical protein SELMODRAFT_54753 [Selaginella moellendorffii]
gi|300156753|gb|EFJ23381.1| hypothetical protein SELMODRAFT_54753 [Selaginella moellendorffii]
Length = 358
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ--PLFELIE 75
++YHC ++ + +DPS+A+ F C+ D LC++ +EL + P+F + E
Sbjct: 303 ASYHCSVVRKMLLDAIDPSLALGFYCRNREDLDDLCARA-SELASQSNGAPMFTVAE 358
>gi|328868883|gb|EGG17261.1| autophagy protein 4 [Dictyostelium fasciculatum]
Length = 616
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 8 VYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQ 67
V+D + ++YH ++H +DPS+A F C T DF C +I+ E+
Sbjct: 493 VHDTIHPFDSNFLNSYHDCIPQKMHFSQIDPSMAFGFYCHTYKDFEQFCIRIK-EIEASG 551
Query: 68 QPLFELIE 75
P+ + E
Sbjct: 552 FPILSIGE 559
>gi|195501322|ref|XP_002097748.1| GE26385 [Drosophila yakuba]
gi|194183849|gb|EDW97460.1| GE26385 [Drosophila yakuba]
Length = 706
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRP 65
++HC +L MDPS + F C T++DF S ++ L P
Sbjct: 567 SFHCKSPRKLKASKMDPSCCIGFYCATKSDFDSFMESVQLYLHP 610
>gi|395750455|ref|XP_002828707.2| PREDICTED: cysteine protease ATG4D [Pongo abelii]
Length = 296
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 14/108 (12%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F L E
Sbjct: 197 SFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSATERYPMFTLAEGH 256
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPR--RVSGVGEGSDDDFEFL 123
+D +L S R PR R+ S +DF FL
Sbjct: 257 AQD--------HSLDDLCSQLSQPTLRLPRTGRLLRAKRPSSEDFVFL 296
>gi|194901010|ref|XP_001980048.1| GG20629 [Drosophila erecta]
gi|190651751|gb|EDV49006.1| GG20629 [Drosophila erecta]
Length = 708
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRP 65
++HC +L MDPS + F C T++DF S ++ L P
Sbjct: 569 SFHCKSPRKLKASKMDPSCCIGFYCATKSDFDSFMESVQLYLHP 612
>gi|432099562|gb|ELK28703.1| Cysteine protease ATG4D, partial [Myotis davidii]
Length = 392
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L ++ P+F L E
Sbjct: 296 SFHCTSPRKMAFTKMDPSCTVGFYAGNRKEFETLCSELTRVLSSSAATQRYPMFTLAEGH 355
Query: 78 IED 80
+D
Sbjct: 356 AQD 358
>gi|14043289|gb|AAH07639.1| ATG4D protein [Homo sapiens]
gi|16877152|gb|AAH16845.1| ATG4D protein [Homo sapiens]
gi|119604522|gb|EAW84116.1| ATG4 autophagy related 4 homolog D (S. cerevisiae), isoform CRA_a
[Homo sapiens]
gi|325464017|gb|ADZ15779.1| ATG4 autophagy related 4 homolog D (S. cerevisiae) [synthetic
construct]
Length = 141
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 14/108 (12%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F L E
Sbjct: 42 SFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSATERYPMFTLAEGH 101
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPR--RVSGVGEGSDDDFEFL 123
+D +L S R PR R+ S +DF FL
Sbjct: 102 AQD--------HSLDDLCSQLAQPTLRLPRTGRLLRAKRPSSEDFVFL 141
>gi|297828133|ref|XP_002881949.1| autophagy 4a [Arabidopsis lyrata subsp. lyrata]
gi|297327788|gb|EFH58208.1| autophagy 4a [Arabidopsis lyrata subsp. lyrata]
Length = 467
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ---PLFELIE 75
S+YHC + + +DPS+A+ F C+ ++DF C +RA E PLF + +
Sbjct: 384 SSYHCNVIRYVPLESLDPSLALGFYCRDKDDFDDFC--LRASKLAEDSNGAPLFTITQ 439
>gi|449507164|ref|XP_004176805.1| PREDICTED: LOW QUALITY PROTEIN: titin [Taeniopygia guttata]
Length = 33070
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 15/109 (13%)
Query: 15 SEKKLDSTYHCPQASR-----LHILHMDPSIAVCFLCKTENDFASLCSQIRAELR-PEQQ 68
+ +++ S+ HC + + LHI ++ S A + CK N+ S+ S +R P++
Sbjct: 9276 NNQEVHSSAHCELSFKNNTLLLHIKTVEQSDAGLYTCKVSNEAGSVLSTSSVVIREPKKP 9335
Query: 69 PLFELIEDPIEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSD 117
P+F+ P QP + G T SC QP R+ + G +
Sbjct: 9336 PVFD---------QPLQPAAAEEGDTLQLSCHVQGSQPIRIQWLKAGRE 9375
>gi|297820846|ref|XP_002878306.1| autophagy 4b [Arabidopsis lyrata subsp. lyrata]
gi|297324144|gb|EFH54565.1| autophagy 4b [Arabidopsis lyrata subsp. lyrata]
Length = 476
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQ--PLFELIEDP 77
S+YHC + + +DPS+A+ F C+ ++DF C IRA +L + PLF
Sbjct: 387 SSYHCNTLRYVPLESLDPSLALGFYCQDKDDFDDFC--IRATKLAGDSNGAPLF------ 438
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
T TQ +N G + S S++ GE +DD++ L
Sbjct: 439 ----TVTQSHRTNDCGIAETSSSTVISTEIS----GEEHEDDWQLL 476
>gi|391340875|ref|XP_003744760.1| PREDICTED: cysteine protease ATG4D-like [Metaseiulus occidentalis]
Length = 488
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRA--ELRPEQQ--PLFELIE 75
+++HC A ++ +DPS + F CKT DF S S +++ E P+ Q P+F + E
Sbjct: 387 NSFHCTTARKVSFSKLDPSATIGFYCKTRRDFESFQSIMQSVTESCPQNQGYPVFIISE 445
>gi|354475125|ref|XP_003499780.1| PREDICTED: cysteine protease ATG4D [Cricetulus griseus]
gi|344240088|gb|EGV96191.1| Cysteine protease ATG4D [Cricetulus griseus]
Length = 474
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS + F +F +LCS++ L E+ P+F + E
Sbjct: 375 SFHCTSPRKMAFAKMDPSCTIGFYAGNRKEFETLCSELMRILSSSSVTERYPMFTVAEGH 434
Query: 78 IED 80
+D
Sbjct: 435 AQD 437
>gi|444525500|gb|ELV14047.1| Cysteine protease ATG4D [Tupaia chinensis]
Length = 431
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS V F +F LCS++ L E+ P+F L E
Sbjct: 332 SFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFEMLCSELTRVLSSSSATERYPMFTLAEGH 391
Query: 78 IED 80
+D
Sbjct: 392 AQD 394
>gi|50344862|ref|NP_001002103.1| cysteine protease ATG4C [Danio rerio]
gi|47938047|gb|AAH71514.1| Autophagy-related 4C (yeast) [Danio rerio]
Length = 463
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRP---EQQPLFELIEDPI 78
++HCP ++ MDPS + F K+ F + +++ L+P E+ P F +++
Sbjct: 371 SFHCPSPKKMSFSKMDPSCTIGFYSKSVEHFEKIANELSKILQPSSKEKYPAFTIMKGHG 430
Query: 79 EDW 81
+D+
Sbjct: 431 KDY 433
>gi|395756856|ref|XP_002834509.2| PREDICTED: cysteine protease ATG4D-like [Pongo abelii]
Length = 141
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 14/108 (12%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F L E
Sbjct: 42 SFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSATERYPMFTLAEGH 101
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPR--RVSGVGEGSDDDFEFL 123
+D +L S R PR R+ S +DF FL
Sbjct: 102 AQD--------HSLDDLCSQLSQPTLRLPRTGRLLRAKRPSSEDFVFL 141
>gi|154300262|ref|XP_001550547.1| hypothetical protein BC1G_11320 [Botryotinia fuckeliana B05.10]
gi|166990615|sp|A6SDQ3.1|ATG4_BOTFB RecName: Full=Probable cysteine protease atg4; AltName:
Full=Autophagy-related protein 4
gi|347841273|emb|CCD55845.1| similar to cysteine protease atg4 [Botryotinia fuckeliana]
Length = 439
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 24 HCPQASRLHILHMDPSIAVCFLCKTENDF 52
H + RLHI MDPS+ + FL + END+
Sbjct: 358 HTRRLRRLHIKEMDPSMLIAFLIRDENDW 386
>gi|149020505|gb|EDL78310.1| rCG31864, isoform CRA_c [Rattus norvegicus]
Length = 337
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F + E
Sbjct: 238 SFHCTSPRKMAFAKMDPSCTVGFYAGNRKEFETLCSELMRILSSSSVTERYPMFTVAEGH 297
Query: 78 IED 80
+D
Sbjct: 298 AQD 300
>gi|30689628|ref|NP_850412.1| cysteine protease ATG4a [Arabidopsis thaliana]
gi|75160546|sp|Q8S929.1|ATG4A_ARATH RecName: Full=Cysteine protease ATG4a; AltName:
Full=Autophagy-related protein 4 homolog a;
Short=AtAPG4a; Short=Protein autophagy 4a
gi|19912143|dbj|BAB88383.1| autophagy 4a [Arabidopsis thaliana]
gi|110742303|dbj|BAE99076.1| hypothetical protein [Arabidopsis thaliana]
gi|330255286|gb|AEC10380.1| cysteine protease ATG4a [Arabidopsis thaliana]
Length = 467
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 11/75 (14%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ---PLFELIEDP 77
S+YHC + + +DPS+A+ F C+ ++DF C +RA E+ PLF + +
Sbjct: 384 SSYHCNVLRYVPLESLDPSLALGFYCRDKDDFDDFC--LRALKLAEESNGAPLFTVTQ-- 439
Query: 78 IEDWTPTQPRPSNLG 92
T T SN G
Sbjct: 440 ----THTAINQSNYG 450
>gi|3212867|gb|AAC23418.1| unknown protein [Arabidopsis thaliana]
Length = 451
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 11/75 (14%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ---PLFELIEDP 77
S+YHC + + +DPS+A+ F C+ ++DF C +RA E+ PLF + +
Sbjct: 368 SSYHCNVLRYVPLESLDPSLALGFYCRDKDDFDDFC--LRALKLAEESNGAPLFTVTQ-- 423
Query: 78 IEDWTPTQPRPSNLG 92
T T SN G
Sbjct: 424 ----THTAINQSNYG 434
>gi|225680810|gb|EEH19094.1| high affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A
[Paracoccidioides brasiliensis Pb03]
Length = 970
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 43 CFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPIEDWTPTQPRPSNLGGTSSPSCSSM 102
FL K+ +FA + +++ RP PLF L+ I + P+ S P S++
Sbjct: 60 VFLTKSRKEFAKILTEVNESCRPNSNPLFALVAISIIGSSQNTPQSS-----EHPPNSTL 114
Query: 103 RRQPRRVSGVGEG---SDDDFEF 122
+ P R + VG S D+ EF
Sbjct: 115 TKPPSRRTEVGRVLPFSSDEDEF 137
>gi|42571227|ref|NP_973687.1| cysteine protease ATG4a [Arabidopsis thaliana]
gi|330255287|gb|AEC10381.1| cysteine protease ATG4a [Arabidopsis thaliana]
Length = 422
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 11/75 (14%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ---PLFELIEDP 77
S+YHC + + +DPS+A+ F C+ ++DF C +RA E+ PLF + +
Sbjct: 339 SSYHCNVLRYVPLESLDPSLALGFYCRDKDDFDDFC--LRALKLAEESNGAPLFTVTQ-- 394
Query: 78 IEDWTPTQPRPSNLG 92
T T SN G
Sbjct: 395 ----THTAINQSNYG 405
>gi|198438023|ref|XP_002129793.1| PREDICTED: similar to CG6194 CG6194-PA [Ciona intestinalis]
Length = 517
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 24/52 (46%)
Query: 19 LDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPL 70
L YHC + +I MDPS + F C+ DF S + L P +Q +
Sbjct: 358 LLQNYHCNSPRKTNISKMDPSCCLGFYCRDYKDFQSFVCEANKFLSPPKQKM 409
>gi|357612380|gb|EHJ67950.1| autophagy related protein Atg4-like protein [Danaus plexippus]
Length = 354
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPE------QQPLFEL 73
T+HC ++ I MDPS + F +T +DF + + I L P+ + P+F L
Sbjct: 252 TFHCRSPRKMPISKMDPSCCIGFYLQTHHDFETFVNVINTFLTPQGVSSSNEYPMFTL 309
>gi|78070455|gb|AAI07651.1| Atg4d protein [Rattus norvegicus]
Length = 168
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F + E
Sbjct: 69 SFHCTSPRKMAFAKMDPSCTVGFYAGNRKEFETLCSELMRILSSSSVTERYPMFTVAEGH 128
Query: 78 IED 80
+D
Sbjct: 129 AQD 131
>gi|195328749|ref|XP_002031074.1| GM25780 [Drosophila sechellia]
gi|194120017|gb|EDW42060.1| GM25780 [Drosophila sechellia]
Length = 703
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRP 65
++HC +L MDPS + F C T++DF + ++ L P
Sbjct: 564 SFHCKSPRKLKASKMDPSCCIGFYCATKSDFDNFMESVQLYLHP 607
>gi|195394658|ref|XP_002055959.1| GJ10670 [Drosophila virilis]
gi|194142668|gb|EDW59071.1| GJ10670 [Drosophila virilis]
Length = 672
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRP 65
++HC +L MDPS + F C T+ DF S ++ L P
Sbjct: 534 SFHCKSPRKLKSSKMDPSCCIGFYCATKTDFDSFMESVQLYLHP 577
>gi|24647125|ref|NP_650452.1| CG6194 [Drosophila melanogaster]
gi|23171357|gb|AAF55180.2| CG6194 [Drosophila melanogaster]
gi|261490735|gb|ACX83596.1| RE44406p [Drosophila melanogaster]
Length = 668
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRP 65
++HC +L MDPS + F C T++DF + ++ L P
Sbjct: 529 SFHCKSPRKLKASKMDPSCCIGFYCATKSDFDNFMESVQLYLHP 572
>gi|195570668|ref|XP_002103326.1| GD20357 [Drosophila simulans]
gi|194199253|gb|EDX12829.1| GD20357 [Drosophila simulans]
Length = 703
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRP 65
++HC +L MDPS + F C T++DF + ++ L P
Sbjct: 564 SFHCKSPRKLKASKMDPSCCIGFYCATKSDFDNFMESVQLYLHP 607
>gi|17862242|gb|AAL39598.1| LD17482p [Drosophila melanogaster]
Length = 653
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRP 65
++HC +L MDPS + F C T++DF + ++ L P
Sbjct: 514 SFHCKSPRKLKASKMDPSCCIGFYCATKSDFDNFMESVQLYLHP 557
>gi|195113543|ref|XP_002001327.1| GI10728 [Drosophila mojavensis]
gi|193917921|gb|EDW16788.1| GI10728 [Drosophila mojavensis]
Length = 682
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRP 65
++HC +L MDPS + F C T+ DF S ++ L P
Sbjct: 540 SFHCKSPRKLKSSKMDPSCCIGFYCPTKTDFDSFVESVQLYLHP 583
>gi|195054945|ref|XP_001994383.1| GH16873 [Drosophila grimshawi]
gi|193892146|gb|EDV91012.1| GH16873 [Drosophila grimshawi]
Length = 673
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQ 67
++HC ++ MDPS + F C T+ DF S ++ L P++
Sbjct: 535 SFHCKSPRKIKSSKMDPSCCIGFYCATKTDFDSFVESVQLYLHPKR 580
>gi|164660504|ref|XP_001731375.1| hypothetical protein MGL_1558 [Malassezia globosa CBS 7966]
gi|159105275|gb|EDP44161.1| hypothetical protein MGL_1558 [Malassezia globosa CBS 7966]
Length = 651
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 6 IGVYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRA 61
+ + +E + ++LDS +H P S L I MDPS+ + F+C+ +D L ++I +
Sbjct: 532 VSPWFEEAYTAEELDS-FHTPHTSLLPISQMDPSMLLGFVCEQASDLIDLQARIES 586
>gi|47222154|emb|CAG11580.1| unnamed protein product [Tetraodon nigroviridis]
Length = 440
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRP---EQQPLFELIE 75
++HCP ++ MDPS + F ++ DF + ++ L+P E+ P F ++
Sbjct: 383 SFHCPSPKKMPFTKMDPSCTLGFYSRSAQDFEKIKQELTKLLQPSSKEKYPAFIFVQ 439
>gi|392586633|gb|EIW75969.1| hypothetical protein CONPUDRAFT_111807 [Coniophora puteana
RWD-64-598 SS2]
Length = 1038
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPIEDW 81
T+HC + ++ + +DPS+ + FLC+ E D+ +I +L + +F + ++P +W
Sbjct: 720 TFHCDRVRKMPLSGLDPSMLLGFLCQDEEDWIDFRHRI-TDLMHRNKTIFAIQDEP-PNW 777
Query: 82 T 82
+
Sbjct: 778 S 778
>gi|148693225|gb|EDL25172.1| autophagy-related 4D (yeast), isoform CRA_a [Mus musculus]
Length = 296
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS V F +F +LCS++ L E+ P+F + E
Sbjct: 197 SFHCTSPRKMAFAKMDPSCTVGFYAGNRKEFETLCSELMRILSSSSVTERYPMFTVAEGH 256
Query: 78 IED 80
+D
Sbjct: 257 AQD 259
>gi|194764839|ref|XP_001964535.1| GF23235 [Drosophila ananassae]
gi|190614807|gb|EDV30331.1| GF23235 [Drosophila ananassae]
Length = 668
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRP 65
+++HC +L MDPS + F C T++DF + ++ L P
Sbjct: 527 NSFHCKSPRKLKSSKMDPSCCIGFYCATKSDFDNFMESVQLYLHP 571
>gi|16551551|dbj|BAB71121.1| unnamed protein product [Homo sapiens]
Length = 330
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 14/108 (12%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ DPS V F +F +LCS++ L E+ P+F L E
Sbjct: 231 SFHCTSPRKMAFAKTDPSCTVGFYAGDRKEFGTLCSELTRVLSSSSATERYPMFTLAEGH 290
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPR--RVSGVGEGSDDDFEFL 123
+D +L S R PR R+ S +DF FL
Sbjct: 291 AQD--------HSLDDLCSQLAQPTLRLPRTGRLLRAKRPSSEDFVFL 330
>gi|147862867|emb|CAN81102.1| hypothetical protein VITISV_021940 [Vitis vinifera]
Length = 489
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 8/72 (11%)
Query: 8 VYDKEQDSEKKLDSTYHCPQASRL-HIL--HMDPSIAVCFLCKTENDFASLCSQIRAELR 64
V D +++ + S+YHC +S + HI +DPS+A+ F C+ ++DF C IRA
Sbjct: 370 VVDIRRENLEADTSSYHCNCSSIIRHICLDSIDPSLAIGFYCRDKDDFDDFC--IRASKL 427
Query: 65 PEQQ---PLFEL 73
++ PLF +
Sbjct: 428 ADESNGAPLFTV 439
>gi|405953478|gb|EKC21133.1| Leucine-rich repeat-containing protein 6 [Crassostrea gigas]
Length = 1114
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPL 70
+YHC ++ I +DPS + F C+ + +F Q + P +Q L
Sbjct: 520 SYHCMSPRKVSIDKIDPSCTIGFYCRNQKEFEKFVQQTEEMVAPPKQRL 568
>gi|226292508|gb|EEH47928.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 970
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 43 CFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPIEDWTPTQPRPSNLGGTSSPSCSSM 102
FL K+ +FA + +++ RP PLF L+ I + P+ S P S++
Sbjct: 60 VFLTKSRKEFAKILTEVNESCRPNSNPLFALVAISIIGSSQDTPQSS-----EHPPNSTL 114
Query: 103 RRQPRRVSGVGEG---SDDDFEF 122
+ P R + VG S D+ EF
Sbjct: 115 TKPPSRRTEVGRVLPFSSDEDEF 137
>gi|156396522|ref|XP_001637442.1| predicted protein [Nematostella vectensis]
gi|156224554|gb|EDO45379.1| predicted protein [Nematostella vectensis]
Length = 342
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 16 EKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQ 58
EK ++HCP + MDPS + F C + DF S C
Sbjct: 291 EKFPTESFHCPNPRKTSFKKMDPSCTIGFYCSSHEDFESFCQH 333
>gi|15232213|ref|NP_191554.1| cysteine protease ATG4b [Arabidopsis thaliana]
gi|75182325|sp|Q9M1Y0.1|ATG4B_ARATH RecName: Full=Cysteine protease ATG4b; AltName:
Full=Autophagy-related protein 4 homolog b;
Short=AtAPG4b; Short=Protein autophagy 4b
gi|7019689|emb|CAB75814.1| putative protein [Arabidopsis thaliana]
gi|19912145|dbj|BAB88384.1| autophagy 4b [Arabidopsis thaliana]
gi|110742150|dbj|BAE99003.1| hypothetical protein [Arabidopsis thaliana]
gi|332646468|gb|AEE79989.1| cysteine protease ATG4b [Arabidopsis thaliana]
Length = 477
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRA 61
S+YHC + + +DPS+A+ F C+ ++DF C IRA
Sbjct: 388 SSYHCNTLRYVPLESLDPSLALGFYCQHKDDFDDFC--IRA 426
>gi|255576671|ref|XP_002529225.1| Cysteine protease ATG4B, putative [Ricinus communis]
gi|223531343|gb|EEF33181.1| Cysteine protease ATG4B, putative [Ricinus communis]
Length = 489
Score = 35.0 bits (79), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 5 HIGVYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR 64
+IG D E D+ S+YH + + +DPS+A+ F C+ ++DF C + ++L
Sbjct: 373 NIGRDDIEADT-----SSYHSDIVRHIPLHSIDPSLAIGFYCRDKDDFDEFC-LLASKLA 426
Query: 65 PEQQ--PLFEL 73
+ Q PLF +
Sbjct: 427 DDSQGAPLFTV 437
>gi|334326299|ref|XP_001366933.2| PREDICTED: cysteine protease ATG4D [Monodelphis domestica]
Length = 482
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 14/108 (12%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR----PEQQPLFELIEDP 77
++HC ++ MDPS + F +F LC ++ L E+ P+F L E
Sbjct: 383 SFHCTSPRKMAFSRMDPSCTIGFYAGNRKEFEMLCLELTRVLNSSSATERYPMFTLSEGH 442
Query: 78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPR--RVSGVGEGSDDDFEFL 123
++++ L SS R P+ ++S S +DF FL
Sbjct: 443 AQEYS--------LEEVSSQLTQQTLRLPQAGKLSKAKRPSSEDFVFL 482
>gi|348511374|ref|XP_003443219.1| PREDICTED: cysteine protease ATG4D-like [Oreochromis niloticus]
Length = 459
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAEL--RPEQQPLF 71
++HC ++ MDPS + F K + +F SLC+ + + E P+F
Sbjct: 364 SFHCKNPRKMPFSRMDPSCTIGFYAKGQMEFESLCTSVNEAVSASAETYPMF 415
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.135 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,226,075,490
Number of Sequences: 23463169
Number of extensions: 90841044
Number of successful extensions: 210872
Number of sequences better than 100.0: 491
Number of HSP's better than 100.0 without gapping: 394
Number of HSP's successfully gapped in prelim test: 97
Number of HSP's that attempted gapping in prelim test: 210428
Number of HSP's gapped (non-prelim): 512
length of query: 124
length of database: 8,064,228,071
effective HSP length: 90
effective length of query: 34
effective length of database: 5,952,542,861
effective search space: 202386457274
effective search space used: 202386457274
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 69 (31.2 bits)