BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy10473
VGTGHIGVYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIR
AELRPEQQPLFELIEDPIEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDF
EFLG

High Scoring Gene Products

Symbol, full name Information P value
ATG4A
Cysteine protease ATG4A 		protein from Homo sapiens 5.3e-11
Atg4
Autophagy-specific gene 4 		protein from Drosophila melanogaster 1.0e-10
ATG4A
Uncharacterized protein 		protein from Canis lupus familiaris 1.2e-10
ATG4A
Cysteine protease ATG4A 		protein from Bos taurus 1.6e-10
ATG4A
Cysteine protease ATG4A 		protein from Bos taurus 2.0e-10
ATG4A
Cysteine protease ATG4A 		protein from Homo sapiens 2.0e-10
LOC100156732
Uncharacterized protein 		protein from Sus scrofa 2.7e-10
LOC100156732
Uncharacterized protein 		protein from Sus scrofa 4.4e-10
ATG4A
Cysteine protease ATG4A 		protein from Gallus gallus 6.1e-09
ATG4B
Uncharacterized protein 		protein from Canis lupus familiaris 6.9e-09
atg4b
ATG4 autophagy related 4 homolog B (S. cerevisiae) 		gene_product from Danio rerio 1.4e-08
ATG4B
Cysteine protease ATG4B 		protein from Homo sapiens 2.6e-08
ATG4B
Cysteine protease ATG4B 		protein from Homo sapiens 4.1e-08
atg4a
ATG4 autophagy related 4 homolog A (S. cerevisiae) 		gene_product from Danio rerio 4.5e-08
ATG4B
Cysteine protease ATG4B 		protein from Bos taurus 4.9e-08
ATG4B
Cysteine protease ATG4B 		protein from Bos taurus 4.9e-08
ATG4B
Cysteine protease ATG4B 		protein from Homo sapiens 5.8e-08
ATG4B
Cysteine protease ATG4B 		protein from Homo sapiens 6.2e-08
Atg4al1
autophagy related 4A, cysteine peptidase-like 1 		gene from Rattus norvegicus 6.6e-08
Atg4b
autophagy related 4B, cysteine peptidase 		gene from Rattus norvegicus 8.8e-08
Atg4b
autophagy related 4B, cysteine peptidase 		protein from Mus musculus 1.0e-07
ATG4B
Cysteine protease ATG4B 		protein from Gallus gallus 2.2e-07
ATG4B
Cysteine protease ATG4B 		protein from Gallus gallus 2.2e-07
atg-4.1
Protein ATG-4.1, isoform a 		protein from Caenorhabditis elegans 2.8e-07
LOC100156732
Uncharacterized protein 		protein from Sus scrofa 8.3e-07
LOC100156732
Uncharacterized protein 		protein from Sus scrofa 1.3e-06
ATG4A
Cysteine protease ATG4A 		protein from Homo sapiens 2.2e-06
DDB_G0283753 gene from Dictyostelium discoideum 8.6e-05
ATG4D
ATG4D protein 		protein from Bos taurus 0.00012
ATG4D
Uncharacterized protein 		protein from Bos taurus 0.00019
ATG4C
Uncharacterized protein 		protein from Gallus gallus 0.00030
Atg4c
autophagy related 4C, cysteine peptidase 		protein from Mus musculus 0.00049
Atg4c
autophagy related 4C, cysteine peptidase 		gene from Rattus norvegicus 0.00057
ATG4C
Uncharacterized protein 		protein from Bos taurus 0.00062
ATG4C
Uncharacterized protein 		protein from Canis lupus familiaris 0.00062
ATG4C
Cysteine protease ATG4C 		protein from Homo sapiens 0.00062
ATG4C
Uncharacterized protein 		protein from Sus scrofa 0.00080
ATG4D
Cysteine protease ATG4D 		protein from Sus scrofa 0.00083
ATG4D
Cysteine protease ATG4D 		protein from Sus scrofa 0.00083
ATG4B
Cysteine protease ATG4B 		protein from Oryza sativa Indica Group 0.00085

The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy10473
        (124 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

UNIPROTKB|F5H3G3 - symbol:ATG4A "Cysteine protease ATG4A"...   154  5.3e-11   1
FB|FBgn0031298 - symbol:Atg4 "Autophagy-specific gene 4" ...   157  1.0e-10   1
UNIPROTKB|E2RLY1 - symbol:ATG4A "Uncharacterized protein"...   156  1.2e-10   1
UNIPROTKB|Q6PZ05 - symbol:ATG4A "Cysteine protease ATG4A"...   155  1.6e-10   1
UNIPROTKB|A6QLH1 - symbol:ATG4A "ATG4 autophagy related 4...   154  2.0e-10   1
UNIPROTKB|Q8WYN0 - symbol:ATG4A "Cysteine protease ATG4A"...   154  2.0e-10   1
UNIPROTKB|K7GPU1 - symbol:LOC100156732 "Uncharacterized p...   149  2.7e-10   1
UNIPROTKB|K7GK67 - symbol:LOC100156732 "Uncharacterized p...   149  4.4e-10   1
UNIPROTKB|Q5ZIW7 - symbol:ATG4A "Cysteine protease ATG4A"...   140  6.1e-09   1
UNIPROTKB|F1PAF7 - symbol:ATG4B "Uncharacterized protein"...   138  6.9e-09   1
ZFIN|ZDB-GENE-040917-3 - symbol:atg4b "ATG4 autophagy rel...   137  1.4e-08   1
UNIPROTKB|H7C2A6 - symbol:ATG4B "Cysteine protease ATG4B"...   127  2.6e-08   1
UNIPROTKB|F8WD71 - symbol:ATG4B "Cysteine protease ATG4B"...   131  4.1e-08   1
ZFIN|ZDB-GENE-050522-430 - symbol:atg4a "ATG4 autophagy r...   132  4.5e-08   1
UNIPROTKB|F1MJZ9 - symbol:ATG4B "Cysteine protease ATG4B"...   132  4.9e-08   1
UNIPROTKB|Q6PZ03 - symbol:ATG4B "Cysteine protease ATG4B"...   132  4.9e-08   1
UNIPROTKB|F5H7P2 - symbol:ATG4B "Cysteine protease ATG4B"...   131  5.8e-08   1
UNIPROTKB|Q9Y4P1 - symbol:ATG4B "Cysteine protease ATG4B"...   131  6.2e-08   1
RGD|1596915 - symbol:Atg4al1 "autophagy related 4A, cyste...   131  6.6e-08   1
RGD|1309664 - symbol:Atg4b "autophagy related 4B, cystein...   124  8.8e-08   1
MGI|MGI:1913865 - symbol:Atg4b "autophagy related 4B, cys...   129  1.0e-07   1
UNIPROTKB|F1NW36 - symbol:ATG4B "Cysteine protease ATG4B"...   126  2.2e-07   1
UNIPROTKB|Q6PZ02 - symbol:ATG4B "Cysteine protease ATG4B"...   126  2.2e-07   1
WB|WBGene00013595 - symbol:atg-4.1 species:6239 "Caenorha...   126  2.8e-07   1
UNIPROTKB|Q9NA30 - symbol:atg-4.1 "Protein ATG-4.1, isofo...   126  2.8e-07   1
UNIPROTKB|F1LRG2 - symbol:Atg4b "Protein Atg4b" species:1...   124  3.6e-07   1
UNIPROTKB|F1RXI5 - symbol:LOC100156732 "Uncharacterized p...   120  8.3e-07   1
UNIPROTKB|K7GM02 - symbol:LOC100156732 "Uncharacterized p...   111  1.3e-06   1
UNIPROTKB|H7BYM2 - symbol:ATG4A "Cysteine protease ATG4A"...   115  2.2e-06   1
DICTYBASE|DDB_G0283753 - symbol:DDB_G0283753 species:4468...   104  8.6e-05   1
UNIPROTKB|A6QQI5 - symbol:ATG4D "ATG4D protein" species:9...   100  0.00012   1
UNIPROTKB|F1N5L1 - symbol:ATG4D "Uncharacterized protein"...   100  0.00019   1
UNIPROTKB|E1BS34 - symbol:ATG4C "Uncharacterized protein"...    98  0.00030   1
MGI|MGI:2651854 - symbol:Atg4c "autophagy related 4C, cys...    96  0.00049   1
RGD|1598323 - symbol:Atg4c "autophagy related 4C, cystein...    95  0.00057   1
UNIPROTKB|F1MJ23 - symbol:ATG4C "Uncharacterized protein"...    95  0.00062   1
UNIPROTKB|E2R5A4 - symbol:ATG4C "Uncharacterized protein"...    95  0.00062   1
UNIPROTKB|Q96DT6 - symbol:ATG4C "Cysteine protease ATG4C"...    95  0.00062   1
UNIPROTKB|F1S810 - symbol:ATG4C "Uncharacterized protein"...    94  0.00080   1
UNIPROTKB|F1S3M2 - symbol:ATG4D "Cysteine protease ATG4D"...    94  0.00083   1
UNIPROTKB|Q684M2 - symbol:ATG4D "Cysteine protease ATG4D"...    94  0.00083   1
UNIPROTKB|Q2XPP4 - symbol:ATG4B "Cysteine protease ATG4B"...    94  0.00085   1


>UNIPROTKB|F5H3G3 [details] [associations]
            symbol:ATG4A "Cysteine protease ATG4A" species:9606 "Homo
            sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
            GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
            GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624 EMBL:AL031177
            HGNC:HGNC:16489 IPI:IPI01014972 ProteinModelPortal:F5H3G3
            SMR:F5H3G3 Ensembl:ENST00000545696 UCSC:uc011msl.2
            ArrayExpress:F5H3G3 Bgee:F5H3G3 Uniprot:F5H3G3
        Length = 259

 Score = 154 (59.3 bits), Expect = 5.3e-11, P = 5.3e-11
 Identities = 30/78 (38%), Positives = 47/78 (60%)

Query:    10 DKEQDSEKKLDSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ 68
             D E++     D T+HC Q+  R++IL++DPS+A+ F CK E DF + CS ++ E+  E  
Sbjct:   149 DTEENGTVN-DQTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENL 207

Query:    69 PLFELIEDPIEDWTPTQP 86
              +FEL++     W P  P
Sbjct:   208 RMFELVQKHPSHWPPFVP 225


>FB|FBgn0031298 [details] [associations]
            symbol:Atg4 "Autophagy-specific gene 4" species:7227
            "Drosophila melanogaster" [GO:0004197 "cysteine-type endopeptidase
            activity" evidence=ISS] [GO:0010506 "regulation of autophagy"
            evidence=IMP] Pfam:PF03416 GO:GO:0005737 EMBL:AE014134
            GO:GO:0015031 GO:GO:0006914 GO:GO:0006508 GO:GO:0004197
            eggNOG:NOG239662 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
            GeneTree:ENSGT00530000063000 EMBL:AY058573 RefSeq:NP_608563.1
            UniGene:Dm.13477 SMR:Q9VPW2 IntAct:Q9VPW2 MINT:MINT-754833
            STRING:Q9VPW2 MEROPS:C54.A04 EnsemblMetazoa:FBtr0077953
            GeneID:33283 KEGG:dme:Dmel_CG4428 UCSC:CG4428-RA CTD:33283
            FlyBase:FBgn0031298 InParanoid:Q9VPW2 OMA:AVCFLCK OrthoDB:EOG4FXPQ5
            GenomeRNAi:33283 NextBio:782843 Uniprot:Q9VPW2
        Length = 411

 Score = 157 (60.3 bits), Expect = 1.0e-10, P = 1.0e-10
 Identities = 33/79 (41%), Positives = 47/79 (59%)

Query:     8 VYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQ 67
             V  K   +E+  D TYH   A+RL+   MDPS+AVCFLCKT + F SL ++++ E+    
Sbjct:   281 VAQKTAAAEQDYDETYHQKHAARLNFSAMDPSLAVCFLCKTSDSFESLLTKLKEEVLSLC 340

Query:    68 QP-LFELIEDPIEDWTPTQ 85
              P LFE+ +    DW  T+
Sbjct:   341 SPALFEISQTRAVDWDTTE 359


>UNIPROTKB|E2RLY1 [details] [associations]
            symbol:ATG4A "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0015031 "protein transport" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0006914 "autophagy" evidence=IEA] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
            GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
            GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624 OMA:DIKKMCC
            GeneTree:ENSGT00530000063000 EMBL:AAEX03026757
            Ensembl:ENSCAFT00000028612 Uniprot:E2RLY1
        Length = 399

 Score = 156 (60.0 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 29/68 (42%), Positives = 43/68 (63%)

Query:    20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
             D T+HC Q+  R++IL++DPS+A+ F CK E DF S CS ++ E+  E   +FEL++   
Sbjct:   298 DQTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDSWCSLVQKEILKENLRMFELVQKHP 357

Query:    79 EDWTPTQP 86
               W P  P
Sbjct:   358 SHWPPFVP 365


>UNIPROTKB|Q6PZ05 [details] [associations]
            symbol:ATG4A "Cysteine protease ATG4A" species:9913 "Bos
            taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0015031 "protein
            transport" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
            [GO:0006508 "proteolysis" evidence=IEA] Pfam:PF03416 GO:GO:0005737
            GO:GO:0015031 GO:GO:0006914 GO:GO:0008234 GO:GO:0006508
            eggNOG:NOG239662 HOGENOM:HOG000007008 KO:K08342 InterPro:IPR005078
            PANTHER:PTHR22624 EMBL:AY570549 IPI:IPI00693458
            RefSeq:NP_001001171.1 UniGene:Bt.13730 ProteinModelPortal:Q6PZ05
            SMR:Q6PZ05 MEROPS:C54.002 GeneID:408003 KEGG:bta:408003 CTD:115201
            HOVERGEN:HBG050536 InParanoid:Q6PZ05 OrthoDB:EOG4M91RH
            NextBio:20818623 Uniprot:Q6PZ05
        Length = 398

 Score = 155 (59.6 bits), Expect = 1.6e-10, P = 1.6e-10
 Identities = 31/78 (39%), Positives = 46/78 (58%)

Query:    10 DKEQDSEKKLDSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ 68
             D E++     D T+HC Q   R++IL++DPS+A+ F CK E DF S CS ++ E+  E  
Sbjct:   288 DTEENGTAD-DQTFHCLQPPQRMNILNLDPSVALGFFCKEEKDFDSWCSLVQKEILKENL 346

Query:    69 PLFELIEDPIEDWTPTQP 86
              +FEL++     W P  P
Sbjct:   347 RMFELVQKHPSHWPPFVP 364


>UNIPROTKB|A6QLH1 [details] [associations]
            symbol:ATG4A "ATG4 autophagy related 4 homolog A (S.
            cerevisiae)" species:9913 "Bos taurus" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
            [GO:0006914 "autophagy" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] Pfam:PF03416 GO:GO:0005737 GO:GO:0015031
            GO:GO:0006914 GO:GO:0008234 GO:GO:0006508 InterPro:IPR005078
            PANTHER:PTHR22624 IPI:IPI00693458 UniGene:Bt.13730
            HOVERGEN:HBG050536 OMA:DIKKMCC GeneTree:ENSGT00530000063000
            EMBL:DAAA02071498 EMBL:BC147962 SMR:A6QLH1
            Ensembl:ENSBTAT00000018239 InParanoid:A6QLH1 Uniprot:A6QLH1
        Length = 398

 Score = 154 (59.3 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 29/68 (42%), Positives = 42/68 (61%)

Query:    20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
             D T+HC Q   R++IL++DPS+A+ F CK E DF S CS ++ E+  E   +FEL++   
Sbjct:   297 DQTFHCLQPPQRMNILNLDPSVALGFFCKEEKDFDSWCSLVQKEILKENLRMFELVQKHP 356

Query:    79 EDWTPTQP 86
               W P  P
Sbjct:   357 SHWPPFVP 364


>UNIPROTKB|Q8WYN0 [details] [associations]
            symbol:ATG4A "Cysteine protease ATG4A" species:9606 "Homo
            sapiens" [GO:0006914 "autophagy" evidence=IEA] [GO:0015031 "protein
            transport" evidence=IEA] [GO:0006508 "proteolysis" evidence=IDA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=ISS] Pfam:PF03416 GO:GO:0005737
            GO:GO:0015031 GO:GO:0006914 GO:GO:0008234 GO:GO:0006508
            EMBL:CH471120 eggNOG:NOG239662 KO:K08342 InterPro:IPR005078
            PANTHER:PTHR22624 MEROPS:C54.002 CTD:115201 HOVERGEN:HBG050536
            OrthoDB:EOG4M91RH EMBL:AJ504651 EMBL:AB066214 EMBL:AJ320508
            EMBL:AJ320509 EMBL:AK314429 EMBL:AL031177 EMBL:BC041862
            EMBL:BC061696 IPI:IPI00064708 IPI:IPI00292327 IPI:IPI00328880
            IPI:IPI00640839 RefSeq:NP_443168.2 RefSeq:NP_840054.1
            UniGene:Hs.8763 PDB:2FUY PDB:2P82 PDBsum:2FUY PDBsum:2P82
            ProteinModelPortal:Q8WYN0 SMR:Q8WYN0 IntAct:Q8WYN0 STRING:Q8WYN0
            DMDM:61211859 PaxDb:Q8WYN0 PRIDE:Q8WYN0 DNASU:115201
            Ensembl:ENST00000345734 Ensembl:ENST00000372232
            Ensembl:ENST00000372254 Ensembl:ENST00000457035 GeneID:115201
            KEGG:hsa:115201 UCSC:uc004enr.3 UCSC:uc004ent.3
            GeneCards:GC0XP107334 HGNC:HGNC:16489 HPA:HPA036374 MIM:300663
            neXtProt:NX_Q8WYN0 PharmGKB:PA25184 InParanoid:Q8WYN0 OMA:DIKKMCC
            PhylomeDB:Q8WYN0 EvolutionaryTrace:Q8WYN0 GenomeRNAi:115201
            NextBio:79530 ArrayExpress:Q8WYN0 Bgee:Q8WYN0 Genevestigator:Q8WYN0
            GermOnline:ENSG00000101844 Uniprot:Q8WYN0
        Length = 398

 Score = 154 (59.3 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 30/78 (38%), Positives = 47/78 (60%)

Query:    10 DKEQDSEKKLDSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ 68
             D E++     D T+HC Q+  R++IL++DPS+A+ F CK E DF + CS ++ E+  E  
Sbjct:   288 DTEENGTVN-DQTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENL 346

Query:    69 PLFELIEDPIEDWTPTQP 86
              +FEL++     W P  P
Sbjct:   347 RMFELVQKHPSHWPPFVP 364


>UNIPROTKB|K7GPU1 [details] [associations]
            symbol:LOC100156732 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0015031 "protein transport" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0006914 "autophagy" evidence=IEA] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
            InterPro:IPR005078 PANTHER:PTHR22624 GeneTree:ENSGT00530000063000
            EMBL:CU463012 Ensembl:ENSSSCT00000033275 Uniprot:K7GPU1
        Length = 278

 Score = 149 (57.5 bits), Expect = 2.7e-10, P = 2.7e-10
 Identities = 28/68 (41%), Positives = 42/68 (61%)

Query:    20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
             D T+HC Q   R++IL++DPS+A+ F C+ E DF S CS ++ E+  E   +FEL++   
Sbjct:   200 DQTFHCLQPPQRMNILNLDPSVALGFFCQEEKDFDSWCSLVQKEILKENLRMFELVQKHP 259

Query:    79 EDWTPTQP 86
               W P  P
Sbjct:   260 PHWPPFVP 267


>UNIPROTKB|K7GK67 [details] [associations]
            symbol:LOC100156732 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0015031 "protein transport" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0006914 "autophagy" evidence=IEA] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
            InterPro:IPR005078 PANTHER:PTHR22624 GeneTree:ENSGT00530000063000
            EMBL:CU463012 Ensembl:ENSSSCT00000033291 Uniprot:K7GK67
        Length = 325

 Score = 149 (57.5 bits), Expect = 4.4e-10, P = 4.4e-10
 Identities = 28/68 (41%), Positives = 42/68 (61%)

Query:    20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIEDPI 78
             D T+HC Q   R++IL++DPS+A+ F C+ E DF S CS ++ E+  E   +FEL++   
Sbjct:   224 DQTFHCLQPPQRMNILNLDPSVALGFFCQEEKDFDSWCSLVQKEILKENLRMFELVQKHP 283

Query:    79 EDWTPTQP 86
               W P  P
Sbjct:   284 PHWPPFVP 291


>UNIPROTKB|Q5ZIW7 [details] [associations]
            symbol:ATG4A "Cysteine protease ATG4A" species:9031 "Gallus
            gallus" [GO:0006508 "proteolysis" evidence=IEA] [GO:0006914
            "autophagy" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0015031 "protein transport"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
            GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
            GO:GO:0006508 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
            MEROPS:C54.002 CTD:115201 HOVERGEN:HBG050536 EMBL:AJ720667
            IPI:IPI00596391 RefSeq:NP_001258916.1 RefSeq:XP_003641164.1
            UniGene:Gga.53916 ProteinModelPortal:Q5ZIW7 SMR:Q5ZIW7
            GeneID:772074 KEGG:gga:772074 InParanoid:Q5ZIW7 Uniprot:Q5ZIW7
        Length = 380

 Score = 140 (54.3 bits), Expect = 6.1e-09, P = 6.1e-09
 Identities = 29/79 (36%), Positives = 47/79 (59%)

Query:    10 DKEQDSEKKLDSTYHCPQAS-RLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ 68
             D E++     D ++HC QA  R+ I+++DPS+A+ F CK E DF + CS ++ E+  +Q 
Sbjct:   271 DSEENGTVD-DQSFHCQQAPHRMKIMNLDPSVALGFFCKEECDFDNWCSLVQKEILKQQS 329

Query:    69 -PLFELIEDPIEDWTPTQP 86
               +FEL++     W P  P
Sbjct:   330 LRMFELVQKHPPHWPPFIP 348


>UNIPROTKB|F1PAF7 [details] [associations]
            symbol:ATG4B "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0000045 "autophagic vacuole assembly"
            evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0006508 "proteolysis" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] Pfam:PF03416 GO:GO:0005737 GO:GO:0015031
            GO:GO:0000045 GO:GO:0008234 GO:GO:0006508 InterPro:IPR005078
            PANTHER:PTHR22624 GeneTree:ENSGT00530000063000 EMBL:AAEX03014562
            OMA:IPGALPM Ensembl:ENSCAFT00000020734 Uniprot:F1PAF7
        Length = 319

 Score = 138 (53.6 bits), Expect = 6.9e-09, P = 6.9e-09
 Identities = 38/106 (35%), Positives = 51/106 (48%)

Query:    20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
             D ++HC    SR+ I  +DPSIAV F CKTE DF   C Q+R   L     P+FEL+E  
Sbjct:   222 DESFHCQHPPSRMSIGELDPSIAVGFFCKTEGDFDDWCQQVRQLSLLGGALPMFELVEQ- 280

Query:    78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
                      +PS+L      + S       R+    +  D+DFE L
Sbjct:   281 ---------QPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 317


>ZFIN|ZDB-GENE-040917-3 [details] [associations]
            symbol:atg4b "ATG4 autophagy related 4 homolog B (S.
            cerevisiae)" species:7955 "Danio rerio" [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0015031
            "protein transport" evidence=IEA] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006810
            "transport" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] Pfam:PF03416 ZFIN:ZDB-GENE-040917-3
            GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
            GO:GO:0006508 eggNOG:NOG239662 HOGENOM:HOG000007008 OMA:PYRESST
            InterPro:IPR005078 PANTHER:PTHR22624 HOVERGEN:HBG050536
            MEROPS:C54.003 OrthoDB:EOG4JWVDK EMBL:BC076463 IPI:IPI00491010
            UniGene:Dr.89769 ProteinModelPortal:Q6DG88 SMR:Q6DG88 STRING:Q6DG88
            Ensembl:ENSDART00000121558 GeneTree:ENSGT00530000063000
            InParanoid:Q6DG88 Bgee:Q6DG88 Uniprot:Q6DG88
        Length = 394

 Score = 137 (53.3 bits), Expect = 1.4e-08, P = 1.4e-08
 Identities = 26/57 (45%), Positives = 35/57 (61%)

Query:    20 DSTYHCPQAS-RLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQPLFELIE 75
             D +YHC     R+HI  +DPSIA  F C+TE+DF   C+QIR        P+FEL++
Sbjct:   298 DDSYHCQHPPCRMHICELDPSIAAGFFCQTEDDFDDWCAQIRKVSNCRGLPMFELVD 354


>UNIPROTKB|H7C2A6 [details] [associations]
            symbol:ATG4B "Cysteine protease ATG4B" species:9606 "Homo
            sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
            GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
            GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624 EMBL:AC133528
            HGNC:HGNC:20790 ChiTaRS:ATG4B ProteinModelPortal:H7C2A6
            Ensembl:ENST00000428861 Bgee:H7C2A6 Uniprot:H7C2A6
        Length = 193

 Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 26/58 (44%), Positives = 35/58 (60%)

Query:    20 DSTYHCPQAS-RLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIE 75
             D ++HC     R+ I  +DPSIAV F CKTE+DF   C Q++   L     P+FEL+E
Sbjct:   133 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVE 190


>UNIPROTKB|F8WD71 [details] [associations]
            symbol:ATG4B "Cysteine protease ATG4B" species:9606 "Homo
            sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
            GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
            GO:GO:0006508 GO:GO:0045732 InterPro:IPR005078 PANTHER:PTHR22624
            EMBL:AC133528 IPI:IPI00941681 HGNC:HGNC:20790 ChiTaRS:ATG4B
            ProteinModelPortal:F8WD71 SMR:F8WD71 PRIDE:F8WD71
            Ensembl:ENST00000396411 ArrayExpress:F8WD71 Bgee:F8WD71
            Uniprot:F8WD71
        Length = 319

 Score = 131 (51.2 bits), Expect = 4.1e-08, P = 4.1e-08
 Identities = 36/106 (33%), Positives = 51/106 (48%)

Query:    20 DSTYHCPQAS-RLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
             D ++HC     R+ I  +DPSIAV F CKTE+DF   C Q++   L     P+FEL+E  
Sbjct:   222 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVE-- 279

Query:    78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
                      +PS+L      + S       R+    +  D+DFE L
Sbjct:   280 --------LQPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 317


>ZFIN|ZDB-GENE-050522-430 [details] [associations]
            symbol:atg4a "ATG4 autophagy related 4 homolog A
            (S. cerevisiae)" species:7955 "Danio rerio" [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0015031
            "protein transport" evidence=IEA] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006810
            "transport" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] Pfam:PF03416 ZFIN:ZDB-GENE-050522-430
            GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
            GO:GO:0006508 eggNOG:NOG239662 HOGENOM:HOG000007008 KO:K08342
            InterPro:IPR005078 PANTHER:PTHR22624 MEROPS:C54.002 CTD:115201
            HOVERGEN:HBG050536 OrthoDB:EOG4M91RH GeneTree:ENSGT00530000063000
            EMBL:CU571325 EMBL:FP102106 EMBL:BC095617 IPI:IPI00483558
            RefSeq:NP_001019605.1 UniGene:Dr.91549 SMR:Q4VBK1
            Ensembl:ENSDART00000026666 GeneID:554140 KEGG:dre:554140
            InParanoid:Q4VBK1 NextBio:20880699 Uniprot:Q4VBK1
        Length = 375

 Score = 132 (51.5 bits), Expect = 4.5e-08, P = 4.5e-08
 Identities = 26/69 (37%), Positives = 40/69 (57%)

Query:    20 DSTYHCPQAS-RLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQ-PLFELIEDP 77
             D ++HC +   R+ I  +DPS+A+ F CK+E DF S C  ++ EL  ++   +FEL+E  
Sbjct:   275 DQSFHCQRTPHRMKITSLDPSVALGFFCKSEEDFDSWCDLVQQELLKKRNLRMFELVEKH 334

Query:    78 IEDWTPTQP 86
                W P  P
Sbjct:   335 PSHWPPFVP 343


>UNIPROTKB|F1MJZ9 [details] [associations]
            symbol:ATG4B "Cysteine protease ATG4B" species:9913 "Bos
            taurus" [GO:0000045 "autophagic vacuole assembly" evidence=IEA]
            [GO:0015031 "protein transport" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            Pfam:PF03416 GO:GO:0005737 GO:GO:0015031 GO:GO:0000045
            GO:GO:0008234 GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624
            IPI:IPI00704687 GeneTree:ENSGT00530000063000 EMBL:DAAA02009542
            Ensembl:ENSBTAT00000020474 OMA:IPGALPM Uniprot:F1MJZ9
        Length = 393

 Score = 132 (51.5 bits), Expect = 4.9e-08, P = 4.9e-08
 Identities = 35/106 (33%), Positives = 51/106 (48%)

Query:    20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQI-RAELRPEQQPLFELIEDP 77
             D ++HC     R+ I  +DPSIAV F C+TE+DF   C Q+ +  L     P+FEL+E  
Sbjct:   296 DESFHCQHPPGRMSIAELDPSIAVGFFCETEDDFNDWCQQVSKLSLLGGALPMFELVEQ- 354

Query:    78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
                      +PS+L      + S       R+    +  D+DFE L
Sbjct:   355 ---------QPSHLACPDVLNLSLDSSDAERLERFFDSEDEDFEIL 391


>UNIPROTKB|Q6PZ03 [details] [associations]
            symbol:ATG4B "Cysteine protease ATG4B" species:9913 "Bos
            taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0015031 "protein
            transport" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
            [GO:0006508 "proteolysis" evidence=IEA] Pfam:PF03416 GO:GO:0005737
            GO:GO:0015031 GO:GO:0006914 GO:GO:0008234 GO:GO:0006508
            eggNOG:NOG239662 HOGENOM:HOG000007008 KO:K08342 InterPro:IPR005078
            PANTHER:PTHR22624 HOVERGEN:HBG050536 EMBL:AY570550 EMBL:AY570551
            IPI:IPI00704687 IPI:IPI00704763 RefSeq:NP_001001170.1
            UniGene:Bt.49066 ProteinModelPortal:Q6PZ03 SMR:Q6PZ03 STRING:Q6PZ03
            MEROPS:C54.003 GeneID:408002 KEGG:bta:408002 CTD:23192
            InParanoid:Q6PZ03 OrthoDB:EOG4JWVDK NextBio:20818622 Uniprot:Q6PZ03
        Length = 393

 Score = 132 (51.5 bits), Expect = 4.9e-08, P = 4.9e-08
 Identities = 35/106 (33%), Positives = 51/106 (48%)

Query:    20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQI-RAELRPEQQPLFELIEDP 77
             D ++HC     R+ I  +DPSIAV F C+TE+DF   C Q+ +  L     P+FEL+E  
Sbjct:   296 DESFHCQHPPGRMSIAELDPSIAVGFFCETEDDFNDWCQQVSKLSLLGGALPMFELVEQ- 354

Query:    78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
                      +PS+L      + S       R+    +  D+DFE L
Sbjct:   355 ---------QPSHLACPDVLNLSLDSSDAERLERFFDSEDEDFEIL 391


>UNIPROTKB|F5H7P2 [details] [associations]
            symbol:ATG4B "Cysteine protease ATG4B" species:9606 "Homo
            sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
            GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
            GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624 EMBL:AC133528
            HGNC:HGNC:20790 ChiTaRS:ATG4B IPI:IPI00937313
            ProteinModelPortal:F5H7P2 SMR:F5H7P2 PRIDE:F5H7P2
            Ensembl:ENST00000474739 UCSC:uc010zox.2 ArrayExpress:F5H7P2
            Bgee:F5H7P2 Uniprot:F5H7P2
        Length = 379

 Score = 131 (51.2 bits), Expect = 5.8e-08, P = 5.8e-08
 Identities = 36/106 (33%), Positives = 51/106 (48%)

Query:    20 DSTYHCPQAS-RLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
             D ++HC     R+ I  +DPSIAV F CKTE+DF   C Q++   L     P+FEL+E  
Sbjct:   282 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVE-- 339

Query:    78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
                      +PS+L      + S       R+    +  D+DFE L
Sbjct:   340 --------LQPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 377


>UNIPROTKB|Q9Y4P1 [details] [associations]
            symbol:ATG4B "Cysteine protease ATG4B" species:9606 "Homo
            sapiens" [GO:0015031 "protein transport" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=ISS] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0006508 "proteolysis" evidence=IDA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IDA] [GO:0006914
            "autophagy" evidence=IGI] [GO:0000045 "autophagic vacuole assembly"
            evidence=IGI] [GO:0010508 "positive regulation of autophagy"
            evidence=IDA] [GO:0004175 "endopeptidase activity" evidence=IDA]
            EMBL:AJ504652 Pfam:PF03416 GO:GO:0005737 GO:GO:0015031
            GO:GO:0000045 GO:GO:0008234 GO:GO:0006508 GO:GO:0045732
            eggNOG:NOG239662 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
            HOVERGEN:HBG050536 MEROPS:C54.003 CTD:23192 EMBL:AB066215
            EMBL:AB023160 EMBL:AK027332 EMBL:AK027462 EMBL:AK027763
            EMBL:AK125277 EMBL:AL080168 EMBL:AC133528 EMBL:BC000719
            IPI:IPI00554649 IPI:IPI00647200 IPI:IPI00746254 IPI:IPI00941681
            IPI:IPI01018366 PIR:T12492 RefSeq:NP_037457.3 RefSeq:NP_847896.1
            UniGene:Hs.283610 PDB:2CY7 PDB:2D1I PDB:2Z0D PDB:2Z0E PDB:2ZZP
            PDBsum:2CY7 PDBsum:2D1I PDBsum:2Z0D PDBsum:2Z0E PDBsum:2ZZP
            ProteinModelPortal:Q9Y4P1 SMR:Q9Y4P1 IntAct:Q9Y4P1
            MINT:MINT-1414043 STRING:Q9Y4P1 PhosphoSite:Q9Y4P1 DMDM:296434400
            PaxDb:Q9Y4P1 PRIDE:Q9Y4P1 DNASU:23192 Ensembl:ENST00000402096
            Ensembl:ENST00000404914 Ensembl:ENST00000405546 GeneID:23192
            KEGG:hsa:23192 UCSC:uc002wbu.3 UCSC:uc002wbv.3 UCSC:uc002wbw.3
            GeneCards:GC02P242578 H-InvDB:HIX0180188 HGNC:HGNC:20790
            HPA:CAB037195 MIM:611338 neXtProt:NX_Q9Y4P1 PharmGKB:PA134898340
            BindingDB:Q9Y4P1 ChEMBL:CHEMBL1741221 ChiTaRS:ATG4B
            EvolutionaryTrace:Q9Y4P1 GenomeRNAi:23192 NextBio:44679
            ArrayExpress:Q9Y4P1 Bgee:Q9Y4P1 CleanEx:HS_ATG4B
            Genevestigator:Q9Y4P1 GermOnline:ENSG00000168397 Uniprot:Q9Y4P1
        Length = 393

 Score = 131 (51.2 bits), Expect = 6.2e-08, P = 6.2e-08
 Identities = 36/106 (33%), Positives = 51/106 (48%)

Query:    20 DSTYHCPQAS-RLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
             D ++HC     R+ I  +DPSIAV F CKTE+DF   C Q++   L     P+FEL+E  
Sbjct:   296 DESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVE-- 353

Query:    78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
                      +PS+L      + S       R+    +  D+DFE L
Sbjct:   354 --------LQPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEIL 391


>RGD|1596915 [details] [associations]
            symbol:Atg4al1 "autophagy related 4A, cysteine peptidase-like 1"
            species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0006508 "proteolysis" evidence=ISO] [GO:0008150
            "biological_process" evidence=ND] [GO:0008234 "cysteine-type
            peptidase activity" evidence=ISO] RGD:1596915 Pfam:PF03416
            GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
            GO:GO:0006508 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
            HOVERGEN:HBG050536 MEROPS:C54.006 EMBL:BC160890 IPI:IPI00767463
            RefSeq:NP_001119770.1 UniGene:Rn.216396 ProteinModelPortal:B1H274
            SMR:B1H274 GeneID:678769 KEGG:rno:678769 CTD:678769 NextBio:715090
            Genevestigator:B1H274 Uniprot:B1H274
        Length = 406

 Score = 131 (51.2 bits), Expect = 6.6e-08, P = 6.6e-08
 Identities = 28/75 (37%), Positives = 42/75 (56%)

Query:    20 DSTYHCPQA-SRLHILHMDPSIAVC-------FLCKTENDFASLCSQIRAELRPEQQPLF 71
             D T+HC Q+  R+ IL++DPS+A+        F CK E DF + CS ++ E+  E   +F
Sbjct:   298 DHTFHCLQSPQRMSILNLDPSVALVGQGAFMGFFCKEEKDFDNWCSLVQKEILKENLRMF 357

Query:    72 ELIEDPIEDWTPTQP 86
             EL++     W P  P
Sbjct:   358 ELVQKHPSHWPPFVP 372


>RGD|1309664 [details] [associations]
            symbol:Atg4b "autophagy related 4B, cysteine peptidase"
            species:10116 "Rattus norvegicus" [GO:0000045 "autophagic vacuole
            assembly" evidence=ISO] [GO:0003674 "molecular_function"
            evidence=ND] [GO:0004175 "endopeptidase activity" evidence=ISO]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0006508 "proteolysis" evidence=ISO]
            [GO:0006914 "autophagy" evidence=ISO] [GO:0008152 "metabolic
            process" evidence=ISO] [GO:0008233 "peptidase activity"
            evidence=ISO] [GO:0008234 "cysteine-type peptidase activity"
            evidence=ISO] [GO:0010508 "positive regulation of autophagy"
            evidence=ISO] [GO:0045732 "positive regulation of protein catabolic
            process" evidence=IMP] RGD:1309664 Pfam:PF03416 GO:GO:0005737
            GO:GO:0015031 GO:GO:0000045 GO:GO:0008234 GO:GO:0006508
            GO:GO:0045732 eggNOG:NOG239662 HOGENOM:HOG000007008 KO:K08342
            InterPro:IPR005078 PANTHER:PTHR22624 HOVERGEN:HBG050536
            MEROPS:C54.003 CTD:23192 OrthoDB:EOG4JWVDK IPI:IPI00363207
            EMBL:BC098833 RefSeq:NP_001020882.1 UniGene:Rn.163086
            ProteinModelPortal:Q4KM36 SMR:Q4KM36 STRING:Q4KM36
            PhosphoSite:Q4KM36 PRIDE:Q4KM36 GeneID:316640 KEGG:rno:316640
            UCSC:RGD:1309664 InParanoid:Q4KM36 NextBio:671122
            ArrayExpress:Q4KM36 Genevestigator:Q4KM36 Uniprot:Q4KM36
        Length = 224

 Score = 124 (48.7 bits), Expect = 8.8e-08, P = 8.8e-08
 Identities = 36/107 (33%), Positives = 52/107 (48%)

Query:    20 DSTYHCPQAS-RLHILHMDPSIAVCFLCKTENDFASLCSQIR--AELRPEQQPLFELIED 76
             D ++HC     R+ I  +DPSIAV F CKTE DF   C Q++  ++L     P+FEL+E 
Sbjct:   127 DESFHCQHPPCRMGIGELDPSIAVGFFCKTEEDFNDWCQQVKKLSQLGGAL-PMFELVEQ 185

Query:    77 PIEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
                       +PS+L      + S       R+    +  D+DFE L
Sbjct:   186 ----------QPSHLACQDVLNLSLDSSDVERLERFFDSEDEDFEIL 222


>MGI|MGI:1913865 [details] [associations]
            symbol:Atg4b "autophagy related 4B, cysteine peptidase"
            species:10090 "Mus musculus" [GO:0000045 "autophagic vacuole
            assembly" evidence=ISO] [GO:0004175 "endopeptidase activity"
            evidence=ISO] [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005737 "cytoplasm" evidence=ISS;IDA] [GO:0006508 "proteolysis"
            evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0006914
            "autophagy" evidence=ISO;ISS] [GO:0008152 "metabolic process"
            evidence=IDA;TAS] [GO:0008233 "peptidase activity" evidence=IDA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=ISO;TAS]
            [GO:0010508 "positive regulation of autophagy" evidence=ISO]
            [GO:0015031 "protein transport" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0045732 "positive regulation
            of protein catabolic process" evidence=ISO] MGI:MGI:1913865
            Pfam:PF03416 GO:GO:0005737 GO:GO:0015031 GO:GO:0000045
            GO:GO:0006914 GO:GO:0006508 GO:GO:0045732 GO:GO:0004197
            eggNOG:NOG239662 HOGENOM:HOG000007008 KO:K08342 InterPro:IPR005078
            PANTHER:PTHR22624 HOVERGEN:HBG050536 MEROPS:C54.003 CTD:23192
            OrthoDB:EOG4JWVDK GeneTree:ENSGT00530000063000 EMBL:AJ504653
            EMBL:AK028712 EMBL:AK031570 EMBL:AK075796 EMBL:AK088811
            EMBL:BC027184 EMBL:AK129242 IPI:IPI00387185 RefSeq:NP_777363.1
            UniGene:Mm.29087 ProteinModelPortal:Q8BGE6 SMR:Q8BGE6 STRING:Q8BGE6
            PhosphoSite:Q8BGE6 PaxDb:Q8BGE6 PRIDE:Q8BGE6
            Ensembl:ENSMUST00000027502 GeneID:66615 KEGG:mmu:66615
            UCSC:uc007cej.1 InParanoid:Q8BGE6 NextBio:322176 Bgee:Q8BGE6
            CleanEx:MM_ATG4B Genevestigator:Q8BGE6
            GermOnline:ENSMUSG00000026280 Uniprot:Q8BGE6
        Length = 393

 Score = 129 (50.5 bits), Expect = 1.0e-07, P = 1.0e-07
 Identities = 37/107 (34%), Positives = 53/107 (49%)

Query:    20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIR--AELRPEQQPLFELIED 76
             D ++HC    SR+ I  +DPSIAV F CKTE DF   C Q++  ++L     P+FEL+E 
Sbjct:   296 DESFHCQHPPSRMGIGELDPSIAVGFFCKTEEDFNDWCQQVKKLSQLGGAL-PMFELVEQ 354

Query:    77 PIEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
                       +PS+L      + S       R+    +  D+DFE L
Sbjct:   355 ----------QPSHLACQDVLNLSLDSSDVERLERFFDSEDEDFEIL 391


>UNIPROTKB|F1NW36 [details] [associations]
            symbol:ATG4B "Cysteine protease ATG4B" species:9031 "Gallus
            gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0015031 "protein transport"
            evidence=IEA] [GO:0000045 "autophagic vacuole assembly"
            evidence=IEA] Pfam:PF03416 GO:GO:0005737 GO:GO:0015031
            GO:GO:0000045 GO:GO:0008234 GO:GO:0006508 InterPro:IPR005078
            PANTHER:PTHR22624 IPI:IPI00576723 GeneTree:ENSGT00530000063000
            OMA:AVCFLCK EMBL:AADN02024262 Ensembl:ENSGALT00000010179
            Uniprot:F1NW36
        Length = 391

 Score = 126 (49.4 bits), Expect = 2.2e-07, P = 2.2e-07
 Identities = 38/106 (35%), Positives = 50/106 (47%)

Query:    20 DSTYHCPQAS-RLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
             D ++HC     R+ I  +DPSIAV F C TE DF   C QI+   L     P+FEL+E  
Sbjct:   294 DESFHCQHPPCRMSIAELDPSIAVGFFCHTEEDFNDWCHQIKKLSLVRGALPMFELVERQ 353

Query:    78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
                ++   P   NL    +P  S   R  R      +  D+DFE L
Sbjct:   354 PSHFS--NPDVLNL----TPDSSDADRLERFF----DSEDEDFEIL 389


>UNIPROTKB|Q6PZ02 [details] [associations]
            symbol:ATG4B "Cysteine protease ATG4B" species:9031 "Gallus
            gallus" [GO:0006508 "proteolysis" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0015031
            "protein transport" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0000045 "autophagic vacuole assembly"
            evidence=IEA] Pfam:PF03416 GO:GO:0005737 GO:GO:0015031
            GO:GO:0000045 GO:GO:0008234 GO:GO:0006508 eggNOG:NOG239662
            HOGENOM:HOG000007008 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
            HOVERGEN:HBG050536 MEROPS:C54.003 CTD:23192 OrthoDB:EOG4JWVDK
            EMBL:AY570552 EMBL:AJ720212 IPI:IPI00576723 IPI:IPI00585227
            RefSeq:NP_998738.1 UniGene:Gga.16354 ProteinModelPortal:Q6PZ02
            SMR:Q6PZ02 STRING:Q6PZ02 GeneID:404750 KEGG:gga:404750
            InParanoid:Q6PZ02 NextBio:20817710 Uniprot:Q6PZ02
        Length = 393

 Score = 126 (49.4 bits), Expect = 2.2e-07, P = 2.2e-07
 Identities = 38/106 (35%), Positives = 50/106 (47%)

Query:    20 DSTYHCPQAS-RLHILHMDPSIAVCFLCKTENDFASLCSQIRA-ELRPEQQPLFELIEDP 77
             D ++HC     R+ I  +DPSIAV F C TE DF   C QI+   L     P+FEL+E  
Sbjct:   296 DESFHCQHPPCRMSIAELDPSIAVGFFCHTEEDFNDWCHQIKKLSLVRGALPMFELVERQ 355

Query:    78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
                ++   P   NL    +P  S   R  R      +  D+DFE L
Sbjct:   356 PSHFS--NPDVLNL----TPDSSDADRLERFF----DSEDEDFEIL 391


>WB|WBGene00013595 [details] [associations]
            symbol:atg-4.1 species:6239 "Caenorhabditis elegans"
            [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF03416
            eggNOG:NOG239662 HOGENOM:HOG000007008 KO:K08342 InterPro:IPR005078
            PANTHER:PTHR22624 GeneTree:ENSGT00530000063000 EMBL:AL110500
            RefSeq:NP_493375.2 ProteinModelPortal:Q9NA30 SMR:Q9NA30
            DIP:DIP-26265N IntAct:Q9NA30 MINT:MINT-1053134 STRING:Q9NA30
            MEROPS:C54.008 PaxDb:Q9NA30 EnsemblMetazoa:Y87G2A.3 GeneID:190777
            KEGG:cel:CELE_Y87G2A.3 UCSC:Y87G2A.3 CTD:190777 WormBase:Y87G2A.3
            InParanoid:Q9NA30 OMA:ISIDNFP NextBio:946932 Uniprot:Q9NA30
        Length = 454

 Score = 126 (49.4 bits), Expect = 2.8e-07, P = 2.8e-07
 Identities = 33/108 (30%), Positives = 52/108 (48%)

Query:    20 DSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQP-LFELIEDPI 78
             DSTYHC     +   ++DPS+A+   C+T ++F +LC  ++    P  QP +FE +    
Sbjct:   337 DSTYHCQMMLWIEYENVDPSLALAMFCETRDEFENLCETLQKTTLPASQPPMFEFL---- 392

Query:    79 EDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGS---DDDFEFL 123
                   Q RP  L      +  SM+ + +    +G  +   DDDFE L
Sbjct:   393 ------QRRPKYLPKFEPYTGVSMKIEMKEFDDIGAANVKIDDDFEVL 434


>UNIPROTKB|Q9NA30 [details] [associations]
            symbol:atg-4.1 "Protein ATG-4.1, isoform a" species:6239
            "Caenorhabditis elegans" [GO:0005515 "protein binding"
            evidence=IPI] Pfam:PF03416 eggNOG:NOG239662 HOGENOM:HOG000007008
            KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
            GeneTree:ENSGT00530000063000 EMBL:AL110500 RefSeq:NP_493375.2
            ProteinModelPortal:Q9NA30 SMR:Q9NA30 DIP:DIP-26265N IntAct:Q9NA30
            MINT:MINT-1053134 STRING:Q9NA30 MEROPS:C54.008 PaxDb:Q9NA30
            EnsemblMetazoa:Y87G2A.3 GeneID:190777 KEGG:cel:CELE_Y87G2A.3
            UCSC:Y87G2A.3 CTD:190777 WormBase:Y87G2A.3 InParanoid:Q9NA30
            OMA:ISIDNFP NextBio:946932 Uniprot:Q9NA30
        Length = 454

 Score = 126 (49.4 bits), Expect = 2.8e-07, P = 2.8e-07
 Identities = 33/108 (30%), Positives = 52/108 (48%)

Query:    20 DSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRPEQQP-LFELIEDPI 78
             DSTYHC     +   ++DPS+A+   C+T ++F +LC  ++    P  QP +FE +    
Sbjct:   337 DSTYHCQMMLWIEYENVDPSLALAMFCETRDEFENLCETLQKTTLPASQPPMFEFL---- 392

Query:    79 EDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGS---DDDFEFL 123
                   Q RP  L      +  SM+ + +    +G  +   DDDFE L
Sbjct:   393 ------QRRPKYLPKFEPYTGVSMKIEMKEFDDIGAANVKIDDDFEVL 434


>UNIPROTKB|F1LRG2 [details] [associations]
            symbol:Atg4b "Protein Atg4b" species:10116 "Rattus
            norvegicus" [GO:0000045 "autophagic vacuole assembly" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
            RGD:1309664 Pfam:PF03416 GO:GO:0005737 GO:GO:0015031 GO:GO:0000045
            GO:GO:0008234 GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624
            GeneTree:ENSGT00530000063000 OMA:AVCFLCK IPI:IPI00363207
            PRIDE:F1LRG2 Ensembl:ENSRNOT00000025529 ArrayExpress:F1LRG2
            Uniprot:F1LRG2
        Length = 394

 Score = 124 (48.7 bits), Expect = 3.6e-07, P = 3.6e-07
 Identities = 36/107 (33%), Positives = 52/107 (48%)

Query:    20 DSTYHCPQAS-RLHILHMDPSIAVCFLCKTENDFASLCSQIR--AELRPEQQPLFELIED 76
             D ++HC     R+ I  +DPSIAV F CKTE DF   C Q++  ++L     P+FEL+E 
Sbjct:   297 DESFHCQHPPCRMGIGELDPSIAVGFFCKTEEDFNDWCQQVKKLSQLGGAL-PMFELVEQ 355

Query:    77 PIEDWTPTQPRPSNLGGTSSPSCSSMRRQPRRVSGVGEGSDDDFEFL 123
                       +PS+L      + S       R+    +  D+DFE L
Sbjct:   356 ----------QPSHLACQDVLNLSLDSSDVERLERFFDSEDEDFEIL 392


>UNIPROTKB|F1RXI5 [details] [associations]
            symbol:LOC100156732 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0015031
            "protein transport" evidence=IEA] [GO:0006914 "autophagy"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
            GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
            GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624 OMA:DIKKMCC
            GeneTree:ENSGT00530000063000 EMBL:CU463012
            Ensembl:ENSSSCT00000013744 Uniprot:F1RXI5
        Length = 359

 Score = 120 (47.3 bits), Expect = 8.3e-07, P = 8.3e-07
 Identities = 23/58 (39%), Positives = 37/58 (63%)

Query:    20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQI-RAELRPEQQPLFELIE 75
             D T+HC Q   R++IL++DPS+A+ F C+ E DF S CS + +  +      +FEL++
Sbjct:   297 DQTFHCLQPPQRMNILNLDPSVALGFFCQEEKDFDSWCSLVQKVSINGPSIEMFELVQ 354


>UNIPROTKB|K7GM02 [details] [associations]
            symbol:LOC100156732 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0015031 "protein transport" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0006914 "autophagy" evidence=IEA] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
            InterPro:IPR005078 PANTHER:PTHR22624 GeneTree:ENSGT00530000063000
            EMBL:CU463012 Ensembl:ENSSSCT00000035338 Uniprot:K7GM02
        Length = 159

 Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 20/42 (47%), Positives = 30/42 (71%)

Query:    20 DSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIR 60
             D T+HC Q   R++IL++DPS+A+ F C+ E DF S CS ++
Sbjct:   117 DQTFHCLQPPQRMNILNLDPSVALGFFCQEEKDFDSWCSLVQ 158


>UNIPROTKB|H7BYM2 [details] [associations]
            symbol:ATG4A "Cysteine protease ATG4A" species:9606 "Homo
            sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
            GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
            GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624 EMBL:AL031177
            HGNC:HGNC:16489 ProteinModelPortal:H7BYM2 PRIDE:H7BYM2
            Ensembl:ENST00000394892 Uniprot:H7BYM2
        Length = 312

 Score = 115 (45.5 bits), Expect = 2.2e-06, P = 2.2e-06
 Identities = 22/52 (42%), Positives = 35/52 (67%)

Query:    10 DKEQDSEKKLDSTYHCPQA-SRLHILHMDPSIAVCFLCKTENDFASLCSQIR 60
             D E++     D T+HC Q+  R++IL++DPS+A+ F CK E DF + CS ++
Sbjct:   261 DTEENGTVN-DQTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCSLVQ 311


>DICTYBASE|DDB_G0283753 [details] [associations]
            symbol:DDB_G0283753 species:44689 "Dictyostelium
            discoideum" [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0015031 "protein transport" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0008233
            "peptidase activity" evidence=IEA] [GO:0006914 "autophagy"
            evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            dictyBase:DDB_G0283753 Pfam:PF03416 GO:GO:0005737 EMBL:AAFI02000056
            GO:GO:0015031 GO:GO:0006914 GO:GO:0008234 GO:GO:0006508
            eggNOG:NOG239662 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
            ProtClustDB:CLSZ2431228 RefSeq:XP_638996.1
            ProteinModelPortal:Q54QM7 MEROPS:C54.A09 EnsemblProtists:DDB0218520
            GeneID:8624242 KEGG:ddi:DDB_G0283753 InParanoid:Q54QM7 OMA:RTHVSEV
            Uniprot:Q54QM7
        Length = 551

 Score = 104 (41.7 bits), Expect = 8.6e-05, P = 8.6e-05
 Identities = 22/72 (30%), Positives = 37/72 (51%)

Query:     5 HIGVYDKEQDSEKKLDSTYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR 64
             HI V   E  S+  L+ T+ C    R H+  +DPS+ V F CKT++DF     + +    
Sbjct:   449 HIEV---ENGSKFPLN-TFFCSTTKRTHVSEVDPSLVVAFFCKTKDDFNDFVERSKKMTS 504

Query:    65 PEQQPLFELIED 76
               + P+F + ++
Sbjct:   505 QMENPIFSIFDN 516


>UNIPROTKB|A6QQI5 [details] [associations]
            symbol:ATG4D "ATG4D protein" species:9913 "Bos taurus"
            [GO:0015031 "protein transport" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0006914
            "autophagy" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416 GO:GO:0005737
            GO:GO:0015031 GO:GO:0006914 GO:GO:0008234 GO:GO:0006508
            InterPro:IPR005078 PANTHER:PTHR22624 GeneTree:ENSGT00530000063000
            HOGENOM:HOG000294192 HOVERGEN:HBG050537 MEROPS:C54.005
            EMBL:DAAA02019466 EMBL:BC149849 IPI:IPI00867381 UniGene:Bt.30691
            Ensembl:ENSBTAT00000053355 Uniprot:A6QQI5
        Length = 359

 Score = 100 (40.3 bits), Expect = 0.00012, P = 0.00012
 Identities = 31/108 (28%), Positives = 46/108 (42%)

Query:    22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRP----EQQPLFELIEDP 77
             ++HC    ++    MDPS  V F      +F +LCS++   L      E+ P+F L+E  
Sbjct:   260 SFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSATERYPMFTLVEGH 319

Query:    78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPR--RVSGVGEGSDDDFEFL 123
              +D         +L    SP      R PR  R+      S +DF FL
Sbjct:   320 AQD--------HSLDDLCSPPSQQTLRLPRSGRLLKAKRPSSEDFVFL 359


>UNIPROTKB|F1N5L1 [details] [associations]
            symbol:ATG4D "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0015031 "protein transport" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0006914
            "autophagy" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416 GO:GO:0005737
            GO:GO:0015031 GO:GO:0006914 GO:GO:0008234 GO:GO:0006508
            InterPro:IPR005078 PANTHER:PTHR22624 GeneTree:ENSGT00530000063000
            OMA:YGWAVKS EMBL:DAAA02019466 UniGene:Bt.30691 IPI:IPI00854526
            Ensembl:ENSBTAT00000014200 ArrayExpress:F1N5L1 Uniprot:F1N5L1
        Length = 472

 Score = 100 (40.3 bits), Expect = 0.00019, P = 0.00019
 Identities = 31/108 (28%), Positives = 46/108 (42%)

Query:    22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRP----EQQPLFELIEDP 77
             ++HC    ++    MDPS  V F      +F +LCS++   L      E+ P+F L+E  
Sbjct:   373 SFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSATERYPMFTLVEGH 432

Query:    78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPR--RVSGVGEGSDDDFEFL 123
              +D         +L    SP      R PR  R+      S +DF FL
Sbjct:   433 AQD--------HSLDDLCSPPSQQTLRLPRSGRLLKAKRPSSEDFVFL 472


>UNIPROTKB|E1BS34 [details] [associations]
            symbol:ATG4C "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0015031 "protein transport"
            evidence=IEA] [GO:0000045 "autophagic vacuole assembly"
            evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
            Pfam:PF03416 GO:GO:0005737 GO:GO:0005576 GO:GO:0015031
            GO:GO:0000045 GO:GO:0006508 GO:GO:0004197 KO:K08342
            InterPro:IPR005078 PANTHER:PTHR22624 GeneTree:ENSGT00530000063000
            CTD:84938 OMA:ICHFLGR EMBL:AADN02012479 IPI:IPI00590224
            RefSeq:XP_422520.2 Ensembl:ENSGALT00000017894 GeneID:424688
            KEGG:gga:424688 NextBio:20826988 Uniprot:E1BS34
        Length = 459

 Score = 98 (39.6 bits), Expect = 0.00030, P = 0.00030
 Identities = 19/63 (30%), Positives = 31/63 (49%)

Query:    22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRP---EQQPLFELIEDPI 78
             ++HCP   ++    MDPS  + F C+T  DF     +I   L+    E+ PLF  ++   
Sbjct:   364 SFHCPSPKKMSFKKMDPSCTIGFYCRTVQDFEKASEEITKMLKSSSKEKYPLFTFVKGHS 423

Query:    79 EDW 81
              D+
Sbjct:   424 RDY 426


>MGI|MGI:2651854 [details] [associations]
            symbol:Atg4c "autophagy related 4C, cysteine peptidase"
            species:10090 "Mus musculus" [GO:0000045 "autophagic vacuole
            assembly" evidence=ISO] [GO:0004197 "cysteine-type endopeptidase
            activity" evidence=ISO;ISS] [GO:0005576 "extracellular region"
            evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0006508
            "proteolysis" evidence=ISO] [GO:0006810 "transport" evidence=IEA]
            [GO:0006914 "autophagy" evidence=ISO;ISS] [GO:0008152 "metabolic
            process" evidence=ISA] [GO:0008233 "peptidase activity"
            evidence=ISO] [GO:0008234 "cysteine-type peptidase activity"
            evidence=ISA] [GO:0015031 "protein transport" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] MGI:MGI:2651854
            Pfam:PF03416 GO:GO:0005737 GO:GO:0005576 GO:GO:0015031
            GO:GO:0000045 GO:GO:0006914 GO:GO:0006508 GO:GO:0004197
            eggNOG:NOG239662 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
            GeneTree:ENSGT00530000063000 MEROPS:C54.004 CTD:84938
            HOGENOM:HOG000294192 HOVERGEN:HBG050537 OMA:PARSGCT
            OrthoDB:EOG4GB760 EMBL:AJ312233 EMBL:AL627166 EMBL:BC058981
            IPI:IPI00177235 RefSeq:NP_001139439.1 RefSeq:NP_778194.3
            UniGene:Mm.241663 ProteinModelPortal:Q811C2 SMR:Q811C2
            STRING:Q811C2 PhosphoSite:Q811C2 PRIDE:Q811C2
            Ensembl:ENSMUST00000030279 Ensembl:ENSMUST00000180278 GeneID:242557
            KEGG:mmu:242557 InParanoid:B1ASJ9 NextBio:385412 Bgee:Q811C2
            CleanEx:MM_ATG4C Genevestigator:Q811C2
            GermOnline:ENSMUSG00000028550 Uniprot:Q811C2
        Length = 458

 Score = 96 (38.9 bits), Expect = 0.00049, P = 0.00049
 Identities = 21/71 (29%), Positives = 32/71 (45%)

Query:    22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
             T+HCP   ++    MDPS  + F C+   DF     +I   L+    E+ PLF  +    
Sbjct:   364 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFERASEEITKMLKISSKEKYPLFTFVNGHS 423

Query:    79 EDWTPTQPRPS 89
             +D+  T    S
Sbjct:   424 KDFDFTSTAAS 434


>RGD|1598323 [details] [associations]
            symbol:Atg4c "autophagy related 4C, cysteine peptidase"
            species:10116 "Rattus norvegicus" [GO:0000045 "autophagic vacuole
            assembly" evidence=IEA;ISO] [GO:0003674 "molecular_function"
            evidence=ND] [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0005576 "extracellular region" evidence=IEA;ISO] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0006508 "proteolysis"
            evidence=IEA;ISO] [GO:0006914 "autophagy" evidence=ISO] [GO:0008150
            "biological_process" evidence=ND] [GO:0008233 "peptidase activity"
            evidence=ISO] [GO:0015031 "protein transport" evidence=IEA]
            RGD:1598323 Pfam:PF03416 GO:GO:0005737 GO:GO:0005576 GO:GO:0015031
            GO:GO:0000045 GO:GO:0006508 GO:GO:0004197 InterPro:IPR005078
            PANTHER:PTHR22624 GeneTree:ENSGT00530000063000 IPI:IPI00763704
            Ensembl:ENSRNOT00000011631 Uniprot:F1M3M0
        Length = 432

 Score = 95 (38.5 bits), Expect = 0.00057, P = 0.00057
 Identities = 21/71 (29%), Positives = 31/71 (43%)

Query:    22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
             T+HCP   ++    MDPS  + F C+   DF     +I   L+    E+ PLF  +    
Sbjct:   338 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFERASEEITKMLKISSKEKYPLFTFVNGHS 397

Query:    79 EDWTPTQPRPS 89
              D+  T    S
Sbjct:   398 RDFDFTSTAAS 408


>UNIPROTKB|F1MJ23 [details] [associations]
            symbol:ATG4C "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005576 "extracellular region" evidence=IEA]
            [GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA]
            [GO:0000045 "autophagic vacuole assembly" evidence=IEA] [GO:0015031
            "protein transport" evidence=IEA] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
            GO:GO:0005737 GO:GO:0005576 GO:GO:0015031 GO:GO:0000045
            GO:GO:0006508 GO:GO:0004197 InterPro:IPR005078 PANTHER:PTHR22624
            GeneTree:ENSGT00530000063000 OMA:PARSGCT EMBL:DAAA02008674
            IPI:IPI00717434 UniGene:Bt.31619 PRIDE:F1MJ23
            Ensembl:ENSBTAT00000013356 Uniprot:F1MJ23
        Length = 458

 Score = 95 (38.5 bits), Expect = 0.00062, P = 0.00062
 Identities = 19/63 (30%), Positives = 29/63 (46%)

Query:    22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
             T+HCP   ++    MDPS  + F C+   DF     +I   L+    E+ PLF  +    
Sbjct:   364 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFKRASEEITKMLKISSKEKYPLFTFVNGHS 423

Query:    79 EDW 81
              D+
Sbjct:   424 RDY 426


>UNIPROTKB|E2R5A4 [details] [associations]
            symbol:ATG4C "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
            [GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA]
            [GO:0000045 "autophagic vacuole assembly" evidence=IEA] [GO:0015031
            "protein transport" evidence=IEA] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
            GO:GO:0005737 GO:GO:0005576 GO:GO:0015031 GO:GO:0000045
            GO:GO:0006508 GO:GO:0004197 KO:K08342 InterPro:IPR005078
            PANTHER:PTHR22624 GeneTree:ENSGT00530000063000 CTD:84938
            OMA:PARSGCT EMBL:AAEX03003767 EMBL:AAEX03003768 RefSeq:XP_852273.1
            RefSeq:XP_865426.1 ProteinModelPortal:E2R5A4
            Ensembl:ENSCAFT00000029726 GeneID:489561 KEGG:cfa:489561
            NextBio:20862726 Uniprot:E2R5A4
        Length = 458

 Score = 95 (38.5 bits), Expect = 0.00062, P = 0.00062
 Identities = 19/63 (30%), Positives = 29/63 (46%)

Query:    22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
             T+HCP   ++    MDPS  + F C+   DF     +I   L+    E+ PLF  +    
Sbjct:   364 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFKRASEEITKMLKISSKEKYPLFTFVNGHS 423

Query:    79 EDW 81
              D+
Sbjct:   424 RDY 426


>UNIPROTKB|Q96DT6 [details] [associations]
            symbol:ATG4C "Cysteine protease ATG4C" species:9606 "Homo
            sapiens" [GO:0005829 "cytosol" evidence=ISS] [GO:0004197
            "cysteine-type endopeptidase activity" evidence=IMP] [GO:0008233
            "peptidase activity" evidence=IDA] [GO:0000045 "autophagic vacuole
            assembly" evidence=IGI] [GO:0006612 "protein targeting to membrane"
            evidence=ISS] [GO:0005576 "extracellular region" evidence=IDA]
            [GO:0006914 "autophagy" evidence=IGI] [GO:0006508 "proteolysis"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] EMBL:AJ312234
            Pfam:PF03416 GO:GO:0005829 GO:GO:0005576 GO:GO:0006612
            EMBL:CH471059 GO:GO:0000045 GO:GO:0006508 GO:GO:0004197
            eggNOG:NOG239662 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
            EMBL:AJ320169 EMBL:AK027773 EMBL:AC103923 EMBL:BC033024
            IPI:IPI00156979 RefSeq:NP_116241.2 RefSeq:NP_835739.1
            UniGene:Hs.7353 ProteinModelPortal:Q96DT6 SMR:Q96DT6 IntAct:Q96DT6
            STRING:Q96DT6 MEROPS:C54.004 PhosphoSite:Q96DT6 DMDM:61211867
            PRIDE:Q96DT6 DNASU:84938 Ensembl:ENST00000317868
            Ensembl:ENST00000371120 GeneID:84938 KEGG:hsa:84938 UCSC:uc001dat.3
            CTD:84938 GeneCards:GC01P063249 HGNC:HGNC:16040 HPA:HPA007049
            MIM:611339 neXtProt:NX_Q96DT6 PharmGKB:PA25183 HOGENOM:HOG000294192
            HOVERGEN:HBG050537 InParanoid:Q96DT6 OMA:PARSGCT OrthoDB:EOG4GB760
            ChiTaRS:ATG4C GenomeRNAi:84938 NextBio:75392 ArrayExpress:Q96DT6
            Bgee:Q96DT6 CleanEx:HS_ATG4C Genevestigator:Q96DT6
            GermOnline:ENSG00000125703 Uniprot:Q96DT6
        Length = 458

 Score = 95 (38.5 bits), Expect = 0.00062, P = 0.00062
 Identities = 19/63 (30%), Positives = 29/63 (46%)

Query:    22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELR---PEQQPLFELIEDPI 78
             T+HCP   ++    MDPS  + F C+   DF     +I   L+    E+ PLF  +    
Sbjct:   364 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFKRASEEITKMLKFSSKEKYPLFTFVNGHS 423

Query:    79 EDW 81
              D+
Sbjct:   424 RDY 426


>UNIPROTKB|F1S810 [details] [associations]
            symbol:ATG4C "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005576 "extracellular region" evidence=IEA]
            [GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA]
            [GO:0000045 "autophagic vacuole assembly" evidence=IEA] [GO:0015031
            "protein transport" evidence=IEA] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
            GO:GO:0005737 GO:GO:0005576 GO:GO:0015031 GO:GO:0000045
            GO:GO:0006508 GO:GO:0004197 InterPro:IPR005078 PANTHER:PTHR22624
            GeneTree:ENSGT00530000063000 OMA:PARSGCT EMBL:CU467524
            Ensembl:ENSSSCT00000004223 Uniprot:F1S810
        Length = 458

 Score = 94 (38.1 bits), Expect = 0.00080, P = 0.00080
 Identities = 19/63 (30%), Positives = 29/63 (46%)

Query:    22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRP---EQQPLFELIEDPI 78
             T+HCP   ++    MDPS  + F C+   DF     +I   L+    E+ PLF  +    
Sbjct:   364 TFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFKRASEEITKMLKSSSKEKYPLFTFVNAHS 423

Query:    79 EDW 81
              D+
Sbjct:   424 RDY 426


>UNIPROTKB|F1S3M2 [details] [associations]
            symbol:ATG4D "Cysteine protease ATG4D" species:9823 "Sus
            scrofa" [GO:0015031 "protein transport" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0006914
            "autophagy" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416 GO:GO:0005737
            GO:GO:0015031 GO:GO:0006914 GO:GO:0008234 GO:GO:0006508
            InterPro:IPR005078 PANTHER:PTHR22624 GeneTree:ENSGT00530000063000
            OMA:YGWAVKS EMBL:CU993813 Ensembl:ENSSSCT00000014905 Uniprot:F1S3M2
        Length = 469

 Score = 94 (38.1 bits), Expect = 0.00083, P = 0.00083
 Identities = 32/108 (29%), Positives = 50/108 (46%)

Query:    22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRP----EQQPLFELIEDP 77
             ++HC    ++    MDPS  V F      +F +LCS++   L      E+ P+F L+E  
Sbjct:   370 SFHCTSPRKMAFTKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSATERYPMFTLVEGH 429

Query:    78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPR--RVSGVGEGSDDDFEFL 123
              +D +       +L   S PS  ++R  PR  R+      S +DF FL
Sbjct:   430 AQDHSL-----DDL--CSQPSQPTLRL-PRTGRLLKAKRPSSEDFVFL 469


>UNIPROTKB|Q684M2 [details] [associations]
            symbol:ATG4D "Cysteine protease ATG4D" species:9823 "Sus
            scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0015031 "protein
            transport" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
            [GO:0006508 "proteolysis" evidence=IEA] Pfam:PF03416 GO:GO:0005737
            GO:GO:0015031 GO:GO:0006914 GO:GO:0008234 GO:GO:0006508
            eggNOG:NOG239662 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
            HOGENOM:HOG000294192 HOVERGEN:HBG050537 MEROPS:C54.005 CTD:84971
            OrthoDB:EOG45MN5B EMBL:AJ632303 RefSeq:NP_001116551.1
            UniGene:Ssc.6142 ProteinModelPortal:Q684M2 GeneID:100141400
            KEGG:ssc:100141400 Uniprot:Q684M2
        Length = 469

 Score = 94 (38.1 bits), Expect = 0.00083, P = 0.00083
 Identities = 32/108 (29%), Positives = 50/108 (46%)

Query:    22 TYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAELRP----EQQPLFELIEDP 77
             ++HC    ++    MDPS  V F      +F +LCS++   L      E+ P+F L+E  
Sbjct:   370 SFHCTSPRKMAFTKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSATERYPMFTLVEGH 429

Query:    78 IEDWTPTQPRPSNLGGTSSPSCSSMRRQPR--RVSGVGEGSDDDFEFL 123
              +D +       +L   S PS  ++R  PR  R+      S +DF FL
Sbjct:   430 AQDHSL-----DDL--CSQPSQPTLRL-PRTGRLLKAKRPSSEDFVFL 469


>UNIPROTKB|Q2XPP4 [details] [associations]
            symbol:ATG4B "Cysteine protease ATG4B" species:39946 "Oryza
            sativa Indica Group" [GO:0005737 "cytoplasm" evidence=ISS]
            [GO:0005775 "vacuolar lumen" evidence=ISS] [GO:0005776 "autophagic
            vacuole" evidence=ISS] [GO:0006914 "autophagy" evidence=ISS]
            [GO:0016807 "cysteine-type carboxypeptidase activity" evidence=ISS]
            [GO:0019786 "APG8-specific protease activity" evidence=ISS]
            Pfam:PF03416 GO:GO:0015031 GO:GO:0005776 GO:GO:0006914
            GO:GO:0006508 GO:GO:0005775 HSSP:Q9Y4P1 GO:GO:0019786 GO:GO:0016807
            InterPro:IPR005078 PANTHER:PTHR22624 EMBL:DQ269984 EMBL:CM000129
            ProteinModelPortal:Q2XPP4 MEROPS:C54.001 Gramene:Q2XPP4
            eggNOG:COG5636 Uniprot:Q2XPP4
        Length = 478

 Score = 94 (38.1 bits), Expect = 0.00085, P = 0.00085
 Identities = 20/57 (35%), Positives = 33/57 (57%)

Query:    21 STYHCPQASRLHILHMDPSIAVCFLCKTENDFASLCSQIRAEL--RPEQQPLFELIE 75
             S+YHC     L +  +DPS+A+ F C+ ++DF   CS+   EL  +    PLF +++
Sbjct:   381 SSYHCSTVRDLALDLIDPSLAIGFYCRDKDDFDDFCSRA-TELVDKANGAPLFTVVQ 436


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.135   0.417    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      124       124   0.00091  102 3  11 22  0.41    31
                                                     29  0.39    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  42
  No. of states in DFA:  596 (63 KB)
  Total size of DFA:  143 KB (2087 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.89u 0.10s 15.99t   Elapsed:  00:00:02
  Total cpu time:  15.89u 0.10s 15.99t   Elapsed:  00:00:02
  Start:  Thu Aug 15 16:08:27 2013   End:  Thu Aug 15 16:08:29 2013

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